Query 012349
Match_columns 465
No_of_seqs 300 out of 2654
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 07:42:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012349.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012349hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fgw_A Glycerol-3-phosphate de 100.0 2.1E-68 7.1E-73 550.7 30.5 340 41-440 32-389 (391)
2 3k96_A Glycerol-3-phosphate de 100.0 7.9E-62 2.7E-66 498.3 36.9 325 42-442 28-356 (356)
3 1yj8_A Glycerol-3-phosphate de 100.0 2.4E-45 8.1E-50 377.4 31.3 344 32-440 10-371 (375)
4 1x0v_A GPD-C, GPDH-C, glycerol 100.0 4.7E-42 1.6E-46 348.7 35.3 332 43-439 8-352 (354)
5 1z82_A Glycerol-3-phosphate de 100.0 1E-41 3.5E-46 345.0 33.2 319 42-445 13-334 (335)
6 1evy_A Glycerol-3-phosphate de 100.0 2.8E-39 9.7E-44 330.5 35.0 324 45-442 17-350 (366)
7 1txg_A Glycerol-3-phosphate de 100.0 7.3E-35 2.5E-39 292.8 32.0 318 44-436 1-333 (335)
8 3hwr_A 2-dehydropantoate 2-red 100.0 3.2E-31 1.1E-35 266.9 23.0 282 42-423 18-310 (318)
9 3hn2_A 2-dehydropantoate 2-red 100.0 1.6E-31 5.4E-36 268.1 20.5 285 43-423 2-301 (312)
10 3i83_A 2-dehydropantoate 2-red 100.0 2.8E-30 9.4E-35 259.9 20.4 281 43-423 2-300 (320)
11 3ghy_A Ketopantoate reductase 100.0 2.5E-29 8.5E-34 254.5 18.6 295 43-423 3-319 (335)
12 3g17_A Similar to 2-dehydropan 100.0 3.5E-28 1.2E-32 241.8 21.5 273 43-423 2-282 (294)
13 2ew2_A 2-dehydropantoate 2-red 100.0 5.6E-27 1.9E-31 232.4 22.9 288 43-423 3-308 (316)
14 2qyt_A 2-dehydropantoate 2-red 99.9 6E-26 2.1E-30 225.8 16.8 291 42-423 7-313 (317)
15 3ego_A Probable 2-dehydropanto 99.9 6.9E-25 2.3E-29 219.7 20.0 282 43-425 2-293 (307)
16 1ks9_A KPA reductase;, 2-dehyd 99.9 1.9E-24 6.4E-29 212.0 21.5 280 44-422 1-286 (291)
17 3c7a_A Octopine dehydrogenase; 99.9 6.5E-25 2.2E-29 227.1 17.2 297 43-422 2-359 (404)
18 2y0c_A BCEC, UDP-glucose dehyd 99.9 2.1E-22 7.2E-27 213.5 18.6 278 42-424 7-310 (478)
19 4a7p_A UDP-glucose dehydrogena 99.9 1.3E-20 4.6E-25 197.9 20.8 222 44-335 9-249 (446)
20 3gg2_A Sugar dehydrogenase, UD 99.8 4.3E-20 1.5E-24 194.4 19.6 224 44-335 3-245 (450)
21 1mv8_A GMD, GDP-mannose 6-dehy 99.8 4.6E-19 1.6E-23 185.6 19.0 291 44-437 1-311 (436)
22 1bg6_A N-(1-D-carboxylethyl)-L 99.8 3.4E-18 1.2E-22 172.7 21.4 292 43-423 4-328 (359)
23 3pdu_A 3-hydroxyisobutyrate de 99.8 2.8E-18 9.7E-23 169.3 18.5 259 43-422 1-266 (287)
24 3pef_A 6-phosphogluconate dehy 99.8 7E-18 2.4E-22 166.5 19.1 260 44-422 2-266 (287)
25 1vpd_A Tartronate semialdehyde 99.8 1.6E-17 5.4E-22 164.2 21.4 258 43-422 5-270 (299)
26 2f1k_A Prephenate dehydrogenas 99.8 1.5E-18 5.1E-23 170.0 12.6 207 44-323 1-219 (279)
27 2uyy_A N-PAC protein; long-cha 99.8 2.2E-17 7.4E-22 164.9 21.3 258 43-422 30-295 (316)
28 2zyd_A 6-phosphogluconate dehy 99.8 1.1E-18 3.6E-23 185.2 11.0 283 43-436 15-316 (480)
29 3doj_A AT3G25530, dehydrogenas 99.8 2.6E-17 8.9E-22 164.6 19.9 265 39-422 17-286 (310)
30 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.8 1.7E-17 5.7E-22 175.9 19.0 281 44-438 2-308 (478)
31 3g0o_A 3-hydroxyisobutyrate de 99.7 5.5E-17 1.9E-21 161.6 19.3 263 42-422 6-274 (303)
32 2pgd_A 6-phosphogluconate dehy 99.7 5E-17 1.7E-21 172.4 17.5 277 44-424 3-291 (482)
33 1yb4_A Tartronic semialdehyde 99.7 1E-16 3.4E-21 157.9 18.1 259 42-422 2-267 (295)
34 4dll_A 2-hydroxy-3-oxopropiona 99.7 2.5E-16 8.6E-21 158.2 20.9 276 23-422 10-294 (320)
35 2gf2_A Hibadh, 3-hydroxyisobut 99.7 8E-17 2.8E-21 158.8 16.1 252 44-422 1-272 (296)
36 4ezb_A Uncharacterized conserv 99.7 7E-16 2.4E-20 155.0 23.2 252 43-420 24-283 (317)
37 3cky_A 2-hydroxymethyl glutara 99.7 1.6E-16 5.3E-21 157.1 18.1 252 42-422 3-270 (301)
38 2h78_A Hibadh, 3-hydroxyisobut 99.7 2.1E-16 7.1E-21 156.8 19.0 262 42-422 2-275 (302)
39 3g79_A NDP-N-acetyl-D-galactos 99.7 2.8E-16 9.7E-21 166.2 20.5 224 42-333 17-266 (478)
40 2cvz_A Dehydrogenase, 3-hydrox 99.7 3.9E-16 1.3E-20 153.1 18.5 256 43-422 1-261 (289)
41 3qha_A Putative oxidoreductase 99.7 1.4E-16 4.7E-21 158.3 15.1 261 43-423 15-285 (296)
42 2raf_A Putative dinucleotide-b 99.7 3.8E-16 1.3E-20 147.8 16.9 174 42-303 18-200 (209)
43 2o3j_A UDP-glucose 6-dehydroge 99.7 9E-16 3.1E-20 162.7 19.6 226 42-334 8-259 (481)
44 3tri_A Pyrroline-5-carboxylate 99.7 2.4E-15 8.1E-20 148.6 20.4 156 43-273 3-161 (280)
45 2iz1_A 6-phosphogluconate dehy 99.7 5.8E-16 2E-20 163.9 17.0 278 43-438 5-310 (474)
46 3qsg_A NAD-binding phosphogluc 99.7 4.3E-15 1.5E-19 148.8 21.4 255 42-422 23-283 (312)
47 2izz_A Pyrroline-5-carboxylate 99.7 2.6E-15 8.8E-20 151.0 19.8 164 43-279 22-190 (322)
48 3gt0_A Pyrroline-5-carboxylate 99.7 3E-15 1E-19 144.6 19.0 161 43-277 2-164 (247)
49 1i36_A Conserved hypothetical 99.7 6.3E-15 2.2E-19 143.0 21.2 239 44-423 1-248 (264)
50 1dlj_A UDP-glucose dehydrogena 99.7 1.9E-15 6.5E-20 156.7 18.4 210 44-334 1-236 (402)
51 1yqg_A Pyrroline-5-carboxylate 99.7 3.7E-15 1.3E-19 144.4 18.8 250 44-423 1-254 (263)
52 2p4q_A 6-phosphogluconate dehy 99.6 2.6E-15 9E-20 159.7 17.4 286 43-436 10-311 (497)
53 3ojo_A CAP5O; rossmann fold, c 99.6 3.4E-15 1.2E-19 156.1 16.9 217 44-332 12-245 (431)
54 2g5c_A Prephenate dehydrogenas 99.6 4.9E-16 1.7E-20 152.4 9.5 180 43-294 1-194 (281)
55 2rcy_A Pyrroline carboxylate r 99.6 3E-14 1E-18 137.9 21.4 153 43-277 4-158 (262)
56 4huj_A Uncharacterized protein 99.6 5.7E-15 2E-19 140.5 15.7 171 42-280 22-202 (220)
57 2q3e_A UDP-glucose 6-dehydroge 99.6 1E-14 3.5E-19 154.0 18.3 225 42-334 4-253 (467)
58 3pid_A UDP-glucose 6-dehydroge 99.6 1.8E-14 6.1E-19 150.5 19.8 211 42-333 35-264 (432)
59 4gwg_A 6-phosphogluconate dehy 99.6 3.2E-15 1.1E-19 158.3 11.1 274 42-422 3-291 (484)
60 3dtt_A NADP oxidoreductase; st 99.6 1.8E-14 6.3E-19 139.2 14.3 192 42-288 18-225 (245)
61 4gbj_A 6-phosphogluconate dehy 99.5 8.7E-14 3E-18 138.6 17.1 259 44-422 6-270 (297)
62 3l6d_A Putative oxidoreductase 99.5 7.7E-13 2.6E-17 131.9 22.7 256 42-422 8-274 (306)
63 3vtf_A UDP-glucose 6-dehydroge 99.5 3.8E-13 1.3E-17 140.7 20.4 239 13-331 3-257 (444)
64 3obb_A Probable 3-hydroxyisobu 99.5 8E-14 2.7E-18 139.2 12.7 200 42-334 2-205 (300)
65 4e21_A 6-phosphogluconate dehy 99.5 6.4E-13 2.2E-17 135.8 19.5 150 43-268 22-174 (358)
66 2dpo_A L-gulonate 3-dehydrogen 99.5 9.3E-13 3.2E-17 132.6 18.1 183 42-279 5-192 (319)
67 3d1l_A Putative NADP oxidoredu 99.5 3.4E-13 1.2E-17 131.1 14.3 157 43-277 10-169 (266)
68 2ahr_A Putative pyrroline carb 99.4 7.9E-12 2.7E-16 120.9 18.8 152 42-275 2-155 (259)
69 1f0y_A HCDH, L-3-hydroxyacyl-C 99.4 3.1E-12 1.1E-16 127.0 16.3 184 43-277 15-202 (302)
70 3b1f_A Putative prephenate deh 99.4 1.9E-12 6.5E-17 127.3 14.5 164 43-276 6-181 (290)
71 1jay_A Coenzyme F420H2:NADP+ o 99.4 5.2E-12 1.8E-16 118.2 16.3 185 44-289 1-194 (212)
72 2vns_A Metalloreductase steap3 99.4 1.7E-12 6E-17 122.9 12.6 165 43-278 28-196 (215)
73 3c24_A Putative oxidoreductase 99.4 1.9E-12 6.6E-17 127.4 12.7 153 43-275 11-183 (286)
74 3ggo_A Prephenate dehydrogenas 99.4 1.3E-11 4.4E-16 123.8 18.2 162 42-275 32-204 (314)
75 2pv7_A T-protein [includes: ch 99.4 1.6E-11 5.4E-16 122.0 18.2 154 43-285 21-175 (298)
76 4e12_A Diketoreductase; oxidor 99.3 2.4E-11 8.3E-16 119.7 17.8 182 43-279 4-190 (283)
77 3k6j_A Protein F01G10.3, confi 99.3 2.9E-11 1E-15 127.1 18.4 177 43-279 54-234 (460)
78 2yjz_A Metalloreductase steap4 99.0 1.9E-13 6.6E-18 128.6 0.0 160 43-277 19-183 (201)
79 2i76_A Hypothetical protein; N 99.3 1.6E-12 5.4E-17 127.7 5.3 178 43-302 2-187 (276)
80 3mog_A Probable 3-hydroxybutyr 99.2 1.4E-10 4.9E-15 122.9 16.6 180 43-279 5-188 (483)
81 2wtb_A MFP2, fatty acid multif 99.2 2.2E-10 7.6E-15 127.0 17.1 178 43-279 312-495 (725)
82 1np3_A Ketol-acid reductoisome 99.2 1.6E-10 5.3E-15 117.0 14.6 181 44-302 17-218 (338)
83 3ado_A Lambda-crystallin; L-gu 99.2 2.5E-10 8.4E-15 114.8 15.2 182 41-279 4-192 (319)
84 1zej_A HBD-9, 3-hydroxyacyl-CO 99.2 5E-10 1.7E-14 111.4 16.8 156 44-277 13-173 (293)
85 1wdk_A Fatty oxidation complex 99.1 3.3E-10 1.1E-14 125.4 15.7 181 42-279 313-497 (715)
86 1zcj_A Peroxisomal bifunctiona 99.1 1.8E-09 6.1E-14 113.8 18.3 176 43-279 37-218 (463)
87 3ktd_A Prephenate dehydrogenas 99.1 3.9E-10 1.3E-14 114.5 10.9 159 42-275 7-186 (341)
88 1lld_A L-lactate dehydrogenase 98.9 3E-09 1E-13 105.9 11.4 107 41-203 5-130 (319)
89 1pzg_A LDH, lactate dehydrogen 98.9 7.5E-09 2.6E-13 104.5 14.2 106 43-201 9-136 (331)
90 2ewd_A Lactate dehydrogenase,; 98.9 1.1E-08 3.7E-13 102.4 13.4 107 42-202 3-126 (317)
91 3fr7_A Putative ketol-acid red 98.9 1.3E-08 4.6E-13 106.8 14.4 154 44-270 55-230 (525)
92 1hyh_A L-hicdh, L-2-hydroxyiso 98.9 1.4E-08 4.6E-13 101.2 13.5 106 43-202 1-127 (309)
93 2hjr_A Malate dehydrogenase; m 98.8 3.1E-08 1.1E-12 99.8 13.8 106 42-201 13-135 (328)
94 1a5z_A L-lactate dehydrogenase 98.8 4.9E-08 1.7E-12 97.8 12.9 103 44-202 1-121 (319)
95 3zwc_A Peroxisomal bifunctiona 98.7 2.8E-07 9.5E-12 102.2 19.1 178 43-279 316-497 (742)
96 1guz_A Malate dehydrogenase; o 98.7 1.3E-07 4.5E-12 94.3 13.1 107 44-202 1-123 (310)
97 3dfu_A Uncharacterized protein 98.6 1.2E-07 4.2E-12 91.0 10.7 130 42-277 5-134 (232)
98 1t2d_A LDH-P, L-lactate dehydr 98.6 3.1E-07 1.1E-11 92.3 14.1 106 42-201 3-130 (322)
99 1oju_A MDH, malate dehydrogena 98.6 2.1E-07 7.3E-12 92.4 12.3 107 44-202 1-123 (294)
100 2v6b_A L-LDH, L-lactate dehydr 98.6 1.9E-07 6.5E-12 93.0 10.3 103 44-202 1-121 (304)
101 1u8x_X Maltose-6'-phosphate gl 98.6 1.8E-07 6.1E-12 98.7 10.4 111 43-202 28-176 (472)
102 1obb_A Maltase, alpha-glucosid 98.5 4.6E-07 1.6E-11 95.7 11.7 83 43-170 3-87 (480)
103 3ba1_A HPPR, hydroxyphenylpyru 98.4 4.7E-07 1.6E-11 91.4 9.1 94 41-203 162-257 (333)
104 3gvi_A Malate dehydrogenase; N 98.4 2.6E-06 8.9E-11 85.7 14.0 105 43-201 7-128 (324)
105 3fef_A Putative glucosidase LP 98.4 9.2E-07 3.2E-11 92.7 11.0 107 43-202 5-151 (450)
106 2i6t_A Ubiquitin-conjugating e 98.4 2.5E-06 8.4E-11 85.1 13.3 108 36-201 7-129 (303)
107 1ur5_A Malate dehydrogenase; o 98.4 2.2E-06 7.6E-11 85.4 13.0 105 43-201 2-123 (309)
108 1s6y_A 6-phospho-beta-glucosid 98.4 1.3E-06 4.3E-11 91.8 11.5 111 43-202 7-157 (450)
109 2g1u_A Hypothetical protein TM 98.4 4.1E-06 1.4E-10 74.4 12.7 104 43-202 19-123 (155)
110 1ldn_A L-lactate dehydrogenase 98.4 3.4E-06 1.2E-10 84.3 13.5 109 40-201 3-127 (316)
111 2dbq_A Glyoxylate reductase; D 98.3 8.3E-07 2.8E-11 89.6 7.7 97 41-203 148-246 (334)
112 4dgs_A Dehydrogenase; structur 98.3 2.3E-06 7.7E-11 86.7 10.3 90 42-200 170-261 (340)
113 1y6j_A L-lactate dehydrogenase 98.3 4.4E-06 1.5E-10 83.7 12.3 106 42-201 6-127 (318)
114 2gcg_A Glyoxylate reductase/hy 98.3 9.6E-07 3.3E-11 88.9 7.3 94 42-200 154-249 (330)
115 1lss_A TRK system potassium up 98.3 2.7E-06 9.4E-11 73.0 9.1 38 43-86 4-41 (140)
116 3gvx_A Glycerate dehydrogenase 98.2 1.9E-06 6.4E-11 85.5 7.5 92 42-202 121-214 (290)
117 1ez4_A Lactate dehydrogenase; 98.2 1.4E-05 4.9E-10 80.0 13.7 41 42-86 4-44 (318)
118 3p7m_A Malate dehydrogenase; p 98.2 1.6E-05 5.5E-10 79.8 13.8 105 43-201 5-126 (321)
119 3tl2_A Malate dehydrogenase; c 98.2 1.5E-05 5E-10 79.9 13.4 34 43-82 8-42 (315)
120 2d4a_B Malate dehydrogenase; a 98.2 1.3E-05 4.6E-10 79.8 13.0 104 45-201 1-120 (308)
121 2zqz_A L-LDH, L-lactate dehydr 98.2 1.3E-05 4.5E-10 80.5 13.1 109 39-201 5-129 (326)
122 3pqe_A L-LDH, L-lactate dehydr 98.2 1.4E-05 4.7E-10 80.5 12.9 41 42-86 4-44 (326)
123 3d0o_A L-LDH 1, L-lactate dehy 98.2 1.2E-05 4.1E-10 80.4 12.4 41 42-86 5-45 (317)
124 2d0i_A Dehydrogenase; structur 98.2 2E-06 6.7E-11 86.8 6.6 97 40-203 143-241 (333)
125 2hk9_A Shikimate dehydrogenase 98.1 3E-06 1E-10 82.9 7.5 120 14-198 102-222 (275)
126 3nep_X Malate dehydrogenase; h 98.1 1.8E-05 6.2E-10 79.2 12.5 39 44-86 1-39 (314)
127 3ldh_A Lactate dehydrogenase; 98.1 1.6E-05 5.6E-10 80.0 12.2 107 42-201 20-142 (330)
128 2w2k_A D-mandelate dehydrogena 98.1 3.8E-06 1.3E-10 85.2 7.2 95 41-199 161-258 (348)
129 3vku_A L-LDH, L-lactate dehydr 98.1 2.4E-05 8.2E-10 78.7 13.0 43 40-86 6-48 (326)
130 3l4b_C TRKA K+ channel protien 98.1 1E-05 3.5E-10 75.8 8.9 103 44-202 1-104 (218)
131 3pp8_A Glyoxylate/hydroxypyruv 98.0 4.8E-06 1.6E-10 83.4 6.7 94 43-202 139-234 (315)
132 2i99_A MU-crystallin homolog; 98.0 8.3E-06 2.8E-10 81.3 7.3 94 41-197 133-226 (312)
133 2xxj_A L-LDH, L-lactate dehydr 98.0 3.4E-05 1.2E-09 76.9 11.3 39 44-86 1-39 (310)
134 3llv_A Exopolyphosphatase-rela 98.0 1.7E-05 5.7E-10 68.9 7.9 40 42-87 5-44 (141)
135 3ic5_A Putative saccharopine d 98.0 1.9E-05 6.3E-10 65.6 7.9 40 42-86 4-43 (118)
136 3fwz_A Inner membrane protein 98.0 7.2E-05 2.5E-09 65.2 11.8 42 40-87 4-45 (140)
137 3jtm_A Formate dehydrogenase, 97.9 1.2E-05 4E-10 81.8 7.3 97 41-201 162-260 (351)
138 3oj0_A Glutr, glutamyl-tRNA re 97.9 7.7E-06 2.6E-10 71.7 5.2 38 43-86 21-58 (144)
139 1ygy_A PGDH, D-3-phosphoglycer 97.9 1.1E-05 3.7E-10 86.4 7.2 97 41-203 140-238 (529)
140 4aj2_A L-lactate dehydrogenase 97.9 5.6E-05 1.9E-09 76.2 11.1 108 41-201 17-140 (331)
141 3abi_A Putative uncharacterize 97.9 2.3E-05 7.7E-10 79.6 8.1 42 39-87 12-53 (365)
142 2x0j_A Malate dehydrogenase; o 97.9 0.00011 3.9E-09 72.7 12.9 107 44-202 1-123 (294)
143 3evt_A Phosphoglycerate dehydr 97.9 1.6E-05 5.6E-10 79.8 6.8 94 42-201 136-231 (324)
144 3q2i_A Dehydrogenase; rossmann 97.9 7.1E-05 2.4E-09 75.3 11.5 83 40-181 10-96 (354)
145 1mx3_A CTBP1, C-terminal bindi 97.9 2.1E-05 7.3E-10 79.7 7.5 96 40-200 165-262 (347)
146 1gdh_A D-glycerate dehydrogena 97.9 2E-05 6.9E-10 78.9 7.3 94 41-199 144-240 (320)
147 2ekl_A D-3-phosphoglycerate de 97.8 2.3E-05 7.9E-10 78.3 7.2 93 41-199 140-234 (313)
148 3fi9_A Malate dehydrogenase; s 97.8 0.00011 3.9E-09 74.3 12.4 105 43-201 8-130 (343)
149 2hmt_A YUAA protein; RCK, KTN, 97.8 3.3E-05 1.1E-09 66.3 7.3 38 43-86 6-43 (144)
150 2nac_A NAD-dependent formate d 97.8 2.5E-05 8.7E-10 80.5 7.3 97 40-200 188-286 (393)
151 1y81_A Conserved hypothetical 97.8 5.4E-05 1.9E-09 66.6 8.5 75 42-182 13-91 (138)
152 3qy9_A DHPR, dihydrodipicolina 97.8 3.8E-05 1.3E-09 74.1 8.1 126 43-266 3-129 (243)
153 2j6i_A Formate dehydrogenase; 97.8 2.5E-05 8.5E-10 79.7 7.0 96 40-199 161-259 (364)
154 4g2n_A D-isomer specific 2-hyd 97.8 3.7E-05 1.3E-09 77.9 8.1 93 43-201 173-267 (345)
155 1qp8_A Formate dehydrogenase; 97.8 1.9E-05 6.3E-10 78.7 5.7 89 41-199 122-212 (303)
156 2duw_A Putative COA-binding pr 97.8 2.4E-05 8.3E-10 69.4 5.7 83 31-182 5-92 (145)
157 2vt3_A REX, redox-sensing tran 97.8 6.3E-05 2.1E-09 71.3 8.7 96 25-182 69-167 (215)
158 1wwk_A Phosphoglycerate dehydr 97.8 3.9E-05 1.3E-09 76.4 7.7 93 41-199 140-234 (307)
159 3gg9_A D-3-phosphoglycerate de 97.7 3.4E-05 1.2E-09 78.4 6.9 95 42-201 159-255 (352)
160 2dc1_A L-aspartate dehydrogena 97.7 0.00013 4.6E-09 69.2 10.7 81 44-199 1-83 (236)
161 3euw_A MYO-inositol dehydrogen 97.7 0.00012 4E-09 73.4 10.7 82 42-182 3-87 (344)
162 1sc6_A PGDH, D-3-phosphoglycer 97.7 4.6E-05 1.6E-09 78.8 7.5 93 40-200 142-236 (404)
163 3hg7_A D-isomer specific 2-hyd 97.7 2E-05 6.9E-10 79.2 4.6 94 43-202 140-235 (324)
164 4hkt_A Inositol 2-dehydrogenas 97.7 0.00018 6.1E-09 71.6 11.4 79 43-181 3-84 (331)
165 3k5p_A D-3-phosphoglycerate de 97.7 5.6E-05 1.9E-09 78.4 7.5 93 42-202 155-249 (416)
166 2ho3_A Oxidoreductase, GFO/IDH 97.7 0.00028 9.5E-09 70.0 12.2 81 43-181 1-83 (325)
167 3uuw_A Putative oxidoreductase 97.7 0.00012 4.1E-09 72.1 9.4 94 43-202 6-101 (308)
168 3ezy_A Dehydrogenase; structur 97.7 0.00018 6.2E-09 72.0 10.6 95 43-202 2-99 (344)
169 2cuk_A Glycerate dehydrogenase 97.6 3.9E-05 1.3E-09 76.6 5.5 87 42-199 143-231 (311)
170 3ijp_A DHPR, dihydrodipicolina 97.6 0.00021 7.3E-09 70.5 10.7 164 19-273 6-171 (288)
171 3u95_A Glycoside hydrolase, fa 97.6 0.00025 8.6E-09 74.8 12.0 81 44-168 1-84 (477)
172 2d5c_A AROE, shikimate 5-dehyd 97.6 9.5E-05 3.2E-09 71.5 8.0 64 14-86 90-153 (263)
173 3c85_A Putative glutathione-re 97.6 0.00014 4.9E-09 65.8 8.8 40 43-87 39-78 (183)
174 3mz0_A Inositol 2-dehydrogenas 97.6 0.00026 8.8E-09 70.9 11.4 96 43-202 2-101 (344)
175 2g76_A 3-PGDH, D-3-phosphoglyc 97.6 0.00011 3.7E-09 74.2 8.1 93 41-199 163-257 (335)
176 3e9m_A Oxidoreductase, GFO/IDH 97.6 0.00012 4.2E-09 73.0 8.4 81 42-181 4-88 (330)
177 2yq5_A D-isomer specific 2-hyd 97.6 9.3E-05 3.2E-09 74.9 7.4 91 43-201 148-240 (343)
178 1j4a_A D-LDH, D-lactate dehydr 97.6 6.2E-05 2.1E-09 75.8 5.9 90 43-199 146-237 (333)
179 1mld_A Malate dehydrogenase; o 97.6 0.00017 6E-09 71.9 9.2 101 44-201 1-121 (314)
180 3ec7_A Putative dehydrogenase; 97.6 0.00034 1.2E-08 70.6 11.4 97 42-202 22-122 (357)
181 4e5n_A Thermostable phosphite 97.6 5.5E-05 1.9E-09 76.1 5.4 94 42-200 144-239 (330)
182 3evn_A Oxidoreductase, GFO/IDH 97.6 0.00028 9.4E-09 70.3 10.4 95 42-202 4-102 (329)
183 4f3y_A DHPR, dihydrodipicolina 97.6 0.00029 1E-08 69.0 10.3 148 43-273 7-156 (272)
184 2pi1_A D-lactate dehydrogenase 97.5 9.8E-05 3.4E-09 74.4 6.8 92 43-201 141-234 (334)
185 3rc1_A Sugar 3-ketoreductase; 97.5 0.00046 1.6E-08 69.5 11.7 95 42-202 26-124 (350)
186 3db2_A Putative NADPH-dependen 97.5 0.00028 9.4E-09 71.0 9.8 95 42-202 4-101 (354)
187 1id1_A Putative potassium chan 97.5 0.00037 1.3E-08 61.4 9.5 105 44-202 4-110 (153)
188 2d59_A Hypothetical protein PH 97.5 0.00032 1.1E-08 62.0 9.0 96 30-201 13-112 (144)
189 1tlt_A Putative oxidoreductase 97.5 0.00035 1.2E-08 69.1 10.2 40 42-86 4-45 (319)
190 1xdw_A NAD+-dependent (R)-2-hy 97.5 9E-05 3.1E-09 74.6 5.9 90 43-200 146-237 (331)
191 3d4o_A Dipicolinate synthase s 97.5 0.00029 9.9E-09 69.3 9.4 37 42-84 154-190 (293)
192 1smk_A Malate dehydrogenase, g 97.5 0.00015 5.1E-09 72.7 7.2 38 42-83 7-45 (326)
193 1x7d_A Ornithine cyclodeaminas 97.5 7.2E-05 2.4E-09 75.9 4.8 78 42-171 128-205 (350)
194 4hy3_A Phosphoglycerate oxidor 97.5 0.00023 7.9E-09 72.6 8.6 92 43-200 176-269 (365)
195 1dxy_A D-2-hydroxyisocaproate 97.5 0.00013 4.5E-09 73.4 6.7 89 43-199 145-235 (333)
196 2rir_A Dipicolinate synthase, 97.5 0.00029 1E-08 69.4 9.0 95 40-199 154-248 (300)
197 3cea_A MYO-inositol 2-dehydrog 97.4 0.00066 2.3E-08 67.7 11.4 80 42-180 7-91 (346)
198 3c1a_A Putative oxidoreductase 97.4 0.00036 1.2E-08 69.0 9.3 92 42-201 9-103 (315)
199 3oet_A Erythronate-4-phosphate 97.4 0.00013 4.5E-09 74.8 6.1 92 42-202 118-215 (381)
200 2o4c_A Erythronate-4-phosphate 97.4 8.9E-05 3E-09 76.0 4.7 91 41-200 114-210 (380)
201 1b8p_A Protein (malate dehydro 97.4 0.00056 1.9E-08 68.5 10.5 110 42-200 4-136 (329)
202 1iuk_A Hypothetical protein TT 97.4 0.00021 7.3E-09 62.9 6.2 99 30-202 4-106 (140)
203 4h7p_A Malate dehydrogenase; s 97.4 0.0015 5.1E-08 66.1 12.7 130 19-201 6-154 (345)
204 1xea_A Oxidoreductase, GFO/IDH 97.4 0.00028 9.6E-09 70.0 7.3 39 43-86 2-41 (323)
205 2z2v_A Hypothetical protein PH 97.3 0.0004 1.4E-08 70.7 8.5 42 39-87 12-53 (365)
206 4gqa_A NAD binding oxidoreduct 97.3 0.00086 2.9E-08 68.8 11.1 118 19-203 6-132 (412)
207 2glx_A 1,5-anhydro-D-fructose 97.3 0.00078 2.7E-08 66.7 10.1 78 44-180 1-82 (332)
208 1o6z_A MDH, malate dehydrogena 97.3 0.0012 4.1E-08 65.4 11.3 36 44-83 1-39 (303)
209 3ohs_X Trans-1,2-dihydrobenzen 97.3 0.0007 2.4E-08 67.4 9.6 96 43-202 2-101 (334)
210 3m2t_A Probable dehydrogenase; 97.3 0.00085 2.9E-08 67.7 10.1 96 42-202 4-103 (359)
211 3e18_A Oxidoreductase; dehydro 97.3 0.00091 3.1E-08 67.5 10.3 93 43-202 5-100 (359)
212 1ydw_A AX110P-like protein; st 97.3 0.0011 3.7E-08 66.7 10.8 98 42-201 5-105 (362)
213 3u62_A Shikimate dehydrogenase 97.3 0.00055 1.9E-08 66.3 8.1 36 45-86 110-146 (253)
214 3keo_A Redox-sensing transcrip 97.2 0.00061 2.1E-08 64.3 7.9 99 24-183 67-171 (212)
215 3hdj_A Probable ornithine cycl 97.2 0.00055 1.9E-08 68.3 8.0 93 42-196 120-212 (313)
216 2egg_A AROE, shikimate 5-dehyd 97.2 0.0011 3.7E-08 65.5 9.8 66 14-86 113-179 (297)
217 4had_A Probable oxidoreductase 97.2 0.0016 5.5E-08 65.0 11.2 96 42-202 22-121 (350)
218 2dt5_A AT-rich DNA-binding pro 97.2 0.00064 2.2E-08 64.1 7.5 97 25-182 64-162 (211)
219 3ulk_A Ketol-acid reductoisome 97.2 0.0021 7E-08 66.8 11.4 206 24-302 9-245 (491)
220 3hhp_A Malate dehydrogenase; M 97.2 0.0024 8.1E-08 63.7 11.6 36 44-82 1-37 (312)
221 2nu8_A Succinyl-COA ligase [AD 97.1 0.0028 9.7E-08 62.3 11.9 94 42-203 6-102 (288)
222 3jyo_A Quinate/shikimate dehyd 97.1 0.0029 9.9E-08 62.2 11.6 65 15-87 101-166 (283)
223 1omo_A Alanine dehydrogenase; 97.1 0.0014 4.8E-08 65.4 9.5 42 42-87 124-165 (322)
224 3fhl_A Putative oxidoreductase 97.1 0.0021 7.1E-08 64.8 10.8 93 42-202 4-100 (362)
225 3moi_A Probable dehydrogenase; 97.1 0.0015 5.1E-08 66.5 9.7 80 43-181 2-85 (387)
226 1dih_A Dihydrodipicolinate red 97.1 0.0016 5.3E-08 63.8 9.4 150 42-273 4-155 (273)
227 3f4l_A Putative oxidoreductase 97.1 0.0015 5.1E-08 65.4 9.3 48 148-202 51-100 (345)
228 3e82_A Putative oxidoreductase 97.1 0.0027 9.1E-08 64.2 11.1 93 42-202 6-102 (364)
229 1up7_A 6-phospho-beta-glucosid 97.1 0.0024 8.3E-08 66.2 10.8 22 147-168 60-81 (417)
230 1jw9_B Molybdopterin biosynthe 97.1 0.002 6.7E-08 62.0 9.5 34 44-82 32-65 (249)
231 3kux_A Putative oxidoreductase 97.0 0.0029 1E-07 63.4 11.1 93 42-202 6-102 (352)
232 4ew6_A D-galactose-1-dehydroge 97.0 0.0016 5.4E-08 65.1 8.9 87 43-202 25-116 (330)
233 3don_A Shikimate dehydrogenase 97.0 0.00097 3.3E-08 65.4 7.1 65 14-86 90-155 (277)
234 4g65_A TRK system potassium up 97.0 0.00088 3E-08 70.3 7.0 40 42-87 2-41 (461)
235 3bio_A Oxidoreductase, GFO/IDH 97.0 0.0023 7.8E-08 63.3 9.4 38 42-84 8-46 (304)
236 1zh8_A Oxidoreductase; TM0312, 97.0 0.004 1.4E-07 62.2 11.2 100 39-202 14-117 (340)
237 3gdo_A Uncharacterized oxidore 96.9 0.0026 8.9E-08 64.1 9.7 93 42-202 4-100 (358)
238 1h6d_A Precursor form of gluco 96.9 0.002 6.8E-08 66.9 8.8 86 42-181 82-171 (433)
239 1f06_A MESO-diaminopimelate D- 96.9 0.0021 7.1E-08 64.0 8.4 36 43-83 3-39 (320)
240 2p2s_A Putative oxidoreductase 96.9 0.004 1.4E-07 61.9 10.4 81 42-181 3-87 (336)
241 7mdh_A Protein (malate dehydro 96.9 0.0068 2.3E-07 61.9 12.2 41 42-83 31-72 (375)
242 3l9w_A Glutathione-regulated p 96.9 0.0024 8.1E-08 66.1 8.8 39 43-87 4-42 (413)
243 1npy_A Hypothetical shikimate 96.8 0.0037 1.3E-07 61.0 9.4 65 14-86 93-157 (271)
244 2axq_A Saccharopine dehydrogen 96.8 0.0016 5.4E-08 68.5 7.1 51 19-86 11-61 (467)
245 1p77_A Shikimate 5-dehydrogena 96.8 0.0057 2E-07 59.4 10.4 65 14-86 92-156 (272)
246 2aef_A Calcium-gated potassium 96.8 0.0024 8.2E-08 60.0 7.3 37 43-86 9-45 (234)
247 3o8q_A Shikimate 5-dehydrogena 96.7 0.0074 2.5E-07 59.2 10.8 67 14-87 99-165 (281)
248 2ixa_A Alpha-N-acetylgalactosa 96.7 0.01 3.4E-07 61.6 12.3 87 42-181 19-112 (444)
249 3upl_A Oxidoreductase; rossman 96.7 0.011 3.9E-07 61.6 12.5 52 25-86 10-62 (446)
250 3h9u_A Adenosylhomocysteinase; 96.7 0.0039 1.3E-07 64.8 8.9 106 26-199 195-300 (436)
251 3v5n_A Oxidoreductase; structu 96.6 0.0045 1.5E-07 63.7 8.9 98 42-202 36-145 (417)
252 3i23_A Oxidoreductase, GFO/IDH 96.6 0.0076 2.6E-07 60.3 10.3 48 148-202 51-100 (349)
253 3p2y_A Alanine dehydrogenase/p 96.6 0.0024 8.1E-08 65.4 6.6 39 43-87 184-222 (381)
254 3u3x_A Oxidoreductase; structu 96.6 0.007 2.4E-07 61.0 9.9 94 43-202 26-123 (361)
255 3o9z_A Lipopolysaccaride biosy 96.5 0.015 5.3E-07 57.4 11.8 95 42-202 2-107 (312)
256 3dty_A Oxidoreductase, GFO/IDH 96.5 0.0053 1.8E-07 62.7 8.1 97 43-202 12-120 (398)
257 1nyt_A Shikimate 5-dehydrogena 96.5 0.018 6.3E-07 55.7 11.6 65 14-86 92-156 (271)
258 1v8b_A Adenosylhomocysteinase; 96.4 0.0061 2.1E-07 64.2 8.4 92 41-199 255-346 (479)
259 3ce6_A Adenosylhomocysteinase; 96.4 0.0062 2.1E-07 64.4 8.5 37 42-84 273-309 (494)
260 2fp4_A Succinyl-COA ligase [GD 96.4 0.03 1E-06 55.5 12.9 94 42-203 12-109 (305)
261 3oa2_A WBPB; oxidoreductase, s 96.4 0.02 7E-07 56.6 11.7 95 42-202 2-108 (318)
262 3kb6_A D-lactate dehydrogenase 96.4 0.0039 1.3E-07 62.7 6.5 91 43-200 141-233 (334)
263 5mdh_A Malate dehydrogenase; o 96.4 0.011 3.7E-07 59.5 9.7 40 42-82 2-44 (333)
264 3d64_A Adenosylhomocysteinase; 96.4 0.0067 2.3E-07 64.1 8.5 92 41-199 275-366 (494)
265 1hye_A L-lactate/malate dehydr 96.4 0.025 8.7E-07 56.0 12.1 33 44-80 1-34 (313)
266 1oi7_A Succinyl-COA synthetase 96.4 0.023 7.8E-07 55.9 11.6 94 42-203 6-102 (288)
267 3phh_A Shikimate dehydrogenase 96.4 0.0096 3.3E-07 58.1 8.7 62 14-87 95-156 (269)
268 1gpj_A Glutamyl-tRNA reductase 96.3 0.0075 2.6E-07 62.0 8.2 38 42-85 166-204 (404)
269 4fb5_A Probable oxidoreductase 96.3 0.017 5.7E-07 57.9 10.5 48 149-203 81-130 (393)
270 3fbt_A Chorismate mutase and s 96.3 0.011 3.7E-07 58.1 8.7 64 15-86 96-160 (282)
271 1zud_1 Adenylyltransferase THI 96.3 0.012 4E-07 56.6 8.8 34 44-82 29-62 (251)
272 3ff4_A Uncharacterized protein 96.3 0.012 4E-07 50.6 7.7 89 42-203 3-95 (122)
273 2yv2_A Succinyl-COA synthetase 96.3 0.033 1.1E-06 55.0 12.1 99 37-203 7-109 (297)
274 3n58_A Adenosylhomocysteinase; 96.2 0.021 7E-07 59.6 10.9 49 28-83 233-281 (464)
275 2nvw_A Galactose/lactose metab 96.2 0.011 3.9E-07 62.0 9.2 84 42-181 38-129 (479)
276 3rui_A Ubiquitin-like modifier 96.2 0.029 9.9E-07 56.5 11.6 35 43-82 34-68 (340)
277 4gx0_A TRKA domain protein; me 96.2 0.016 5.5E-07 61.7 10.3 54 26-86 332-385 (565)
278 2vhw_A Alanine dehydrogenase; 96.2 0.0043 1.5E-07 63.2 5.6 39 42-86 167-205 (377)
279 3pwz_A Shikimate dehydrogenase 96.2 0.028 9.5E-07 54.8 11.1 67 14-87 92-159 (272)
280 3gvp_A Adenosylhomocysteinase 96.2 0.0094 3.2E-07 61.9 8.0 51 26-83 204-254 (435)
281 3r6d_A NAD-dependent epimerase 96.2 0.017 5.9E-07 53.1 9.1 38 43-86 4-45 (221)
282 1y8q_A Ubiquitin-like 1 activa 96.2 0.024 8.2E-07 57.1 10.8 52 26-82 16-70 (346)
283 3btv_A Galactose/lactose metab 96.2 0.0079 2.7E-07 62.4 7.4 85 42-182 19-111 (438)
284 3tnl_A Shikimate dehydrogenase 96.2 0.029 9.8E-07 55.9 11.2 61 14-82 127-188 (315)
285 1p9l_A Dihydrodipicolinate red 96.1 0.041 1.4E-06 52.8 11.6 63 160-238 45-107 (245)
286 4dio_A NAD(P) transhydrogenase 96.1 0.0087 3E-07 61.7 7.1 38 43-86 190-227 (405)
287 2eez_A Alanine dehydrogenase; 96.1 0.0071 2.4E-07 61.3 6.4 39 42-86 165-203 (369)
288 3oqb_A Oxidoreductase; structu 96.0 0.012 4E-07 59.5 7.9 46 150-202 71-118 (383)
289 2czc_A Glyceraldehyde-3-phosph 96.0 0.019 6.5E-07 57.5 9.2 37 43-84 2-39 (334)
290 4h3v_A Oxidoreductase domain p 96.0 0.027 9.2E-07 56.3 10.2 100 44-203 7-111 (390)
291 4ina_A Saccharopine dehydrogen 96.0 0.0093 3.2E-07 61.3 6.9 42 43-87 1-42 (405)
292 2yv1_A Succinyl-COA ligase [AD 95.9 0.043 1.5E-06 54.0 11.2 94 42-203 12-108 (294)
293 1lc0_A Biliverdin reductase A; 95.9 0.029 9.8E-07 54.9 9.8 23 42-64 6-28 (294)
294 3ip3_A Oxidoreductase, putativ 95.9 0.014 5E-07 57.9 7.5 47 149-202 54-102 (337)
295 3dr3_A N-acetyl-gamma-glutamyl 95.8 0.034 1.2E-06 55.9 10.1 42 153-200 68-109 (337)
296 4g65_A TRK system potassium up 95.8 0.053 1.8E-06 56.7 11.7 54 27-87 219-272 (461)
297 3h2z_A Mannitol-1-phosphate 5- 95.8 0.009 3.1E-07 61.2 5.7 117 44-203 1-127 (382)
298 4gmf_A Yersiniabactin biosynth 95.8 0.0089 3.1E-07 60.9 5.5 73 42-173 6-79 (372)
299 1ys4_A Aspartate-semialdehyde 95.7 0.026 8.9E-07 56.9 8.5 34 43-81 8-42 (354)
300 3vh1_A Ubiquitin-like modifier 95.7 0.018 6.2E-07 62.0 7.7 35 43-82 327-361 (598)
301 3do5_A HOM, homoserine dehydro 95.7 0.024 8.3E-07 56.7 8.1 23 43-65 2-24 (327)
302 1vl6_A Malate oxidoreductase; 95.6 0.028 9.5E-07 57.5 8.6 37 40-81 189-225 (388)
303 3t4e_A Quinate/shikimate dehyd 95.6 0.076 2.6E-06 52.8 11.5 62 14-82 121-182 (312)
304 1leh_A Leucine dehydrogenase; 95.6 0.025 8.7E-07 57.4 8.1 48 33-86 163-210 (364)
305 3qvo_A NMRA family protein; st 95.6 0.027 9.2E-07 52.6 7.7 39 42-85 22-61 (236)
306 1b7g_O Protein (glyceraldehyde 95.6 0.051 1.8E-06 54.6 10.2 34 148-181 65-98 (340)
307 3h8v_A Ubiquitin-like modifier 95.6 0.085 2.9E-06 52.0 11.5 64 13-82 3-70 (292)
308 1x13_A NAD(P) transhydrogenase 95.5 0.013 4.4E-07 60.3 5.7 38 43-86 172-209 (401)
309 1cf2_P Protein (glyceraldehyde 95.5 0.042 1.4E-06 55.1 9.3 23 43-65 1-23 (337)
310 4hb9_A Similarities with proba 95.5 0.011 3.9E-07 58.9 5.1 34 44-83 2-35 (412)
311 3dfz_A SIRC, precorrin-2 dehyd 95.5 0.022 7.4E-07 54.0 6.7 35 42-82 30-64 (223)
312 1nvm_B Acetaldehyde dehydrogen 95.4 0.063 2.2E-06 53.3 10.3 39 42-84 3-42 (312)
313 1ff9_A Saccharopine reductase; 95.4 0.018 6.3E-07 60.0 6.5 38 43-86 3-40 (450)
314 3h5n_A MCCB protein; ubiquitin 95.4 0.11 3.6E-06 52.5 11.8 35 43-82 118-152 (353)
315 3dhn_A NAD-dependent epimerase 95.4 0.041 1.4E-06 50.5 8.1 38 42-85 3-41 (227)
316 4gsl_A Ubiquitin-like modifier 95.3 0.069 2.4E-06 57.7 10.6 35 43-82 326-360 (615)
317 3ius_A Uncharacterized conserv 95.2 0.021 7.1E-07 54.5 5.7 39 42-86 4-42 (286)
318 3kkj_A Amine oxidase, flavin-c 95.1 0.018 6.1E-07 51.8 4.7 33 44-82 3-35 (336)
319 1lnq_A MTHK channels, potassiu 95.1 0.018 6.3E-07 57.0 5.2 37 43-86 115-151 (336)
320 3e8x_A Putative NAD-dependent 95.0 0.044 1.5E-06 50.9 7.3 38 43-86 21-59 (236)
321 1l7d_A Nicotinamide nucleotide 95.0 0.032 1.1E-06 56.8 6.8 39 42-86 171-209 (384)
322 1y7t_A Malate dehydrogenase; N 95.0 0.046 1.6E-06 54.1 7.8 40 42-82 3-45 (327)
323 3tum_A Shikimate dehydrogenase 94.9 0.11 3.7E-06 50.6 9.9 67 14-87 98-164 (269)
324 3gpi_A NAD-dependent epimerase 94.9 0.02 7E-07 54.7 4.7 35 43-83 3-37 (286)
325 2ozp_A N-acetyl-gamma-glutamyl 94.8 0.087 3E-06 53.0 9.2 37 158-200 66-102 (345)
326 2nqt_A N-acetyl-gamma-glutamyl 94.8 0.057 1.9E-06 54.6 7.8 38 156-200 76-113 (352)
327 1tt5_A APPBP1, amyloid protein 94.7 0.087 3E-06 56.1 9.4 51 27-82 13-66 (531)
328 1tt5_B Ubiquitin-activating en 94.6 0.16 5.5E-06 52.7 10.8 34 44-82 41-74 (434)
329 1pjc_A Protein (L-alanine dehy 94.6 0.048 1.7E-06 55.0 6.7 38 43-86 167-204 (361)
330 2ejw_A HDH, homoserine dehydro 94.4 0.051 1.7E-06 54.5 6.3 23 43-65 3-25 (332)
331 1xyg_A Putative N-acetyl-gamma 94.4 0.061 2.1E-06 54.4 7.0 33 44-81 17-50 (359)
332 3ing_A Homoserine dehydrogenas 94.3 0.11 3.7E-06 51.9 8.4 23 43-65 4-26 (325)
333 3ihm_A Styrene monooxygenase A 94.3 0.036 1.2E-06 56.9 5.0 34 43-82 22-55 (430)
334 3ew7_A LMO0794 protein; Q8Y8U8 94.2 0.051 1.7E-06 49.4 5.5 36 44-85 1-37 (221)
335 3c8m_A Homoserine dehydrogenas 94.2 0.16 5.5E-06 50.7 9.5 23 43-65 6-28 (331)
336 1edz_A 5,10-methylenetetrahydr 94.1 0.054 1.8E-06 54.1 5.8 37 41-83 175-212 (320)
337 3hsk_A Aspartate-semialdehyde 94.1 0.097 3.3E-06 53.5 7.8 38 157-200 90-127 (381)
338 3e48_A Putative nucleoside-dip 94.1 0.083 2.8E-06 50.4 6.8 38 44-86 1-39 (289)
339 3mtj_A Homoserine dehydrogenas 94.0 0.18 6.3E-06 52.4 9.8 45 150-200 66-113 (444)
340 3ond_A Adenosylhomocysteinase; 94.0 0.14 4.9E-06 53.9 8.8 53 25-84 248-300 (488)
341 2rgh_A Alpha-glycerophosphate 94.0 0.055 1.9E-06 57.9 5.8 48 25-82 18-65 (571)
342 2x4g_A Nucleoside-diphosphate- 93.9 0.074 2.5E-06 51.8 6.2 38 42-85 12-50 (342)
343 2c5a_A GDP-mannose-3', 5'-epim 93.8 0.04 1.4E-06 55.2 4.2 59 17-83 5-64 (379)
344 3h2s_A Putative NADH-flavin re 93.8 0.061 2.1E-06 49.1 5.1 36 44-85 1-37 (224)
345 2xdo_A TETX2 protein; tetracyc 93.8 0.061 2.1E-06 54.2 5.5 36 42-83 25-60 (398)
346 1j5p_A Aspartate dehydrogenase 93.7 0.11 3.6E-06 50.2 6.8 46 149-200 49-94 (253)
347 2csu_A 457AA long hypothetical 93.7 0.11 3.6E-06 54.4 7.2 45 152-201 56-100 (457)
348 3c1o_A Eugenol synthase; pheny 93.7 0.082 2.8E-06 51.2 6.0 35 42-82 3-38 (321)
349 3rp8_A Flavoprotein monooxygen 93.7 0.065 2.2E-06 54.0 5.4 36 42-83 22-57 (407)
350 2ywl_A Thioredoxin reductase r 93.7 0.069 2.4E-06 47.3 5.1 34 44-83 2-35 (180)
351 1qyc_A Phenylcoumaran benzylic 93.6 0.08 2.7E-06 50.8 5.7 35 43-83 4-39 (308)
352 3v76_A Flavoprotein; structura 93.6 0.051 1.8E-06 55.9 4.6 35 43-83 27-61 (417)
353 2ep5_A 350AA long hypothetical 93.6 0.25 8.7E-06 49.6 9.6 35 158-198 75-109 (350)
354 4dpk_A Malonyl-COA/succinyl-CO 93.5 0.15 5E-06 51.7 7.8 38 157-200 76-113 (359)
355 4dpl_A Malonyl-COA/succinyl-CO 93.5 0.15 5E-06 51.7 7.8 38 157-200 76-113 (359)
356 1qyd_A Pinoresinol-lariciresin 93.5 0.15 5.2E-06 49.0 7.6 34 43-82 4-38 (313)
357 1y8q_B Anthracycline-, ubiquit 93.5 0.67 2.3E-05 50.4 13.3 34 44-82 18-51 (640)
358 3cmm_A Ubiquitin-activating en 93.5 0.22 7.6E-06 57.0 10.0 52 26-82 7-61 (1015)
359 2yyy_A Glyceraldehyde-3-phosph 93.5 0.3 1E-05 49.1 10.0 23 43-65 2-24 (343)
360 1sb8_A WBPP; epimerase, 4-epim 93.5 0.065 2.2E-06 52.8 5.1 56 19-83 4-62 (352)
361 3pwk_A Aspartate-semialdehyde 93.5 0.18 6.2E-06 51.2 8.4 38 157-200 61-98 (366)
362 1ryi_A Glycine oxidase; flavop 93.5 0.06 2E-06 53.4 4.8 35 42-82 16-50 (382)
363 2gas_A Isoflavone reductase; N 93.5 0.1 3.5E-06 50.1 6.3 34 43-82 2-36 (307)
364 3ruf_A WBGU; rossmann fold, UD 93.4 0.081 2.8E-06 51.9 5.6 47 28-83 13-60 (351)
365 2ph5_A Homospermidine synthase 93.3 0.19 6.6E-06 52.7 8.4 39 43-83 13-51 (480)
366 1yvv_A Amine oxidase, flavin-c 93.1 0.074 2.5E-06 51.6 4.7 33 44-82 3-35 (336)
367 4b4o_A Epimerase family protei 93.1 0.092 3.1E-06 50.5 5.3 34 44-83 1-35 (298)
368 3qj4_A Renalase; FAD/NAD(P)-bi 93.0 0.073 2.5E-06 52.3 4.5 34 43-82 1-37 (342)
369 1c0p_A D-amino acid oxidase; a 93.0 0.11 3.8E-06 51.3 5.9 34 43-82 6-39 (363)
370 2qa1_A PGAE, polyketide oxygen 92.9 0.086 2.9E-06 55.4 5.1 36 42-83 10-45 (500)
371 1nvt_A Shikimate 5'-dehydrogen 92.9 0.2 7E-06 48.5 7.4 65 14-87 101-165 (287)
372 1ebf_A Homoserine dehydrogenas 92.8 0.15 5E-06 51.6 6.4 24 42-65 3-26 (358)
373 2r00_A Aspartate-semialdehyde 92.7 0.3 1E-05 48.9 8.5 34 43-79 3-37 (336)
374 2a9f_A Putative malic enzyme ( 92.6 0.11 3.7E-06 53.3 5.2 38 40-82 185-222 (398)
375 3nrn_A Uncharacterized protein 92.5 0.11 3.7E-06 52.6 5.1 33 44-82 1-33 (421)
376 3dqp_A Oxidoreductase YLBE; al 92.5 0.1 3.5E-06 47.8 4.4 36 44-85 1-37 (219)
377 3eag_A UDP-N-acetylmuramate:L- 92.4 0.31 1E-05 48.2 8.1 35 42-82 3-38 (326)
378 3ngx_A Bifunctional protein fo 92.3 0.18 6.1E-06 49.2 6.1 33 42-80 149-182 (276)
379 3oz2_A Digeranylgeranylglycero 92.3 0.1 3.6E-06 51.3 4.6 33 45-83 6-38 (397)
380 1hdo_A Biliverdin IX beta redu 92.3 0.16 5.3E-06 45.4 5.4 35 44-84 4-39 (206)
381 2nvu_B Maltose binding protein 92.3 0.23 7.8E-06 55.3 7.7 34 44-82 412-445 (805)
382 3f8d_A Thioredoxin reductase ( 92.2 0.14 4.9E-06 48.9 5.2 33 43-81 15-47 (323)
383 2vou_A 2,6-dihydroxypyridine h 92.2 0.15 5.1E-06 51.3 5.6 35 43-83 5-39 (397)
384 2gf3_A MSOX, monomeric sarcosi 92.1 0.13 4.3E-06 51.1 4.9 34 43-82 3-36 (389)
385 3ka7_A Oxidoreductase; structu 92.1 0.13 4.5E-06 51.7 5.1 33 44-82 1-33 (425)
386 3fbs_A Oxidoreductase; structu 92.1 0.15 5.1E-06 48.2 5.2 34 43-82 2-35 (297)
387 2q1s_A Putative nucleotide sug 92.1 0.13 4.5E-06 51.3 5.0 54 25-83 14-68 (377)
388 3dme_A Conserved exported prot 92.0 0.13 4.6E-06 50.1 4.9 33 44-82 5-37 (369)
389 3p2o_A Bifunctional protein fo 92.0 0.27 9.3E-06 48.2 7.0 32 43-80 160-192 (285)
390 2e4g_A Tryptophan halogenase; 92.0 0.15 5.3E-06 53.9 5.7 35 42-82 24-61 (550)
391 3dje_A Fructosyl amine: oxygen 92.0 0.15 5.3E-06 51.7 5.5 34 43-82 6-40 (438)
392 3l07_A Bifunctional protein fo 91.8 0.46 1.6E-05 46.5 8.4 33 42-80 160-193 (285)
393 3itj_A Thioredoxin reductase 1 91.8 0.12 4E-06 49.9 4.2 35 42-82 21-55 (338)
394 2uzz_A N-methyl-L-tryptophan o 91.7 0.12 4.1E-06 51.0 4.2 33 44-82 3-35 (372)
395 4dgk_A Phytoene dehydrogenase; 91.7 0.12 4E-06 53.5 4.2 34 43-82 1-34 (501)
396 1lu9_A Methylene tetrahydromet 91.6 0.27 9.1E-06 47.6 6.5 38 43-86 119-157 (287)
397 3h8l_A NADH oxidase; membrane 91.6 0.16 5.4E-06 51.3 5.1 35 43-83 1-38 (409)
398 3tz6_A Aspartate-semialdehyde 91.6 0.41 1.4E-05 48.1 8.0 38 157-200 60-97 (344)
399 3slg_A PBGP3 protein; structur 91.6 0.22 7.4E-06 49.3 6.0 56 19-85 6-62 (372)
400 4a26_A Putative C-1-tetrahydro 91.5 0.23 7.7E-06 49.1 5.9 33 43-81 165-198 (300)
401 1a4i_A Methylenetetrahydrofola 91.5 0.38 1.3E-05 47.4 7.5 33 42-80 164-197 (301)
402 2gv8_A Monooxygenase; FMO, FAD 91.5 0.17 5.8E-06 51.9 5.2 35 42-82 5-41 (447)
403 1y56_B Sarcosine oxidase; dehy 91.4 0.17 5.7E-06 50.2 4.9 34 43-82 5-38 (382)
404 2r0c_A REBC; flavin adenine di 91.4 0.14 4.7E-06 54.4 4.5 35 43-83 26-60 (549)
405 2hjs_A USG-1 protein homolog; 91.3 0.45 1.6E-05 47.6 8.0 23 43-65 6-29 (340)
406 3nkl_A UDP-D-quinovosamine 4-d 91.3 0.82 2.8E-05 38.7 8.7 35 42-81 3-38 (141)
407 1k0i_A P-hydroxybenzoate hydro 91.3 0.17 5.7E-06 50.6 4.7 34 44-83 3-36 (394)
408 3nks_A Protoporphyrinogen oxid 91.2 0.16 5.4E-06 52.1 4.7 34 43-82 2-37 (477)
409 1xg5_A ARPG836; short chain de 91.1 0.23 7.9E-06 47.3 5.4 38 43-86 32-70 (279)
410 3alj_A 2-methyl-3-hydroxypyrid 91.1 0.2 7E-06 49.8 5.2 35 43-83 11-45 (379)
411 1b0a_A Protein (fold bifunctio 91.1 0.32 1.1E-05 47.7 6.4 33 42-80 158-191 (288)
412 3oh8_A Nucleoside-diphosphate 91.0 0.41 1.4E-05 50.3 7.7 35 43-83 147-182 (516)
413 2q7v_A Thioredoxin reductase; 91.0 0.2 6.7E-06 48.5 4.9 33 43-81 8-40 (325)
414 1u8f_O GAPDH, glyceraldehyde-3 91.0 0.32 1.1E-05 48.7 6.5 23 43-65 3-25 (335)
415 4a5o_A Bifunctional protein fo 91.0 0.34 1.2E-05 47.5 6.5 32 43-80 161-193 (286)
416 3cmm_A Ubiquitin-activating en 91.0 0.44 1.5E-05 54.5 8.3 56 26-82 405-464 (1015)
417 2bry_A NEDD9 interacting prote 90.9 0.29 9.8E-06 51.3 6.4 37 41-83 90-126 (497)
418 3g3e_A D-amino-acid oxidase; F 90.9 0.2 7E-06 49.1 5.0 38 44-82 1-39 (351)
419 2oln_A NIKD protein; flavoprot 90.8 0.2 6.7E-06 50.1 4.8 33 44-82 5-37 (397)
420 1t4b_A Aspartate-semialdehyde 90.8 1.2 4.3E-05 44.9 10.8 43 153-200 59-101 (367)
421 3pzr_A Aspartate-semialdehyde 90.8 1.4 4.6E-05 44.8 11.0 42 153-199 58-99 (370)
422 1mo9_A ORF3; nucleotide bindin 90.8 0.32 1.1E-05 51.2 6.5 35 42-82 42-76 (523)
423 2bi7_A UDP-galactopyranose mut 90.7 0.23 8E-06 50.1 5.3 34 44-83 4-37 (384)
424 3nix_A Flavoprotein/dehydrogen 90.7 0.18 6.1E-06 50.7 4.4 33 44-82 6-38 (421)
425 2b69_A UDP-glucuronate decarbo 90.7 0.26 8.7E-06 48.2 5.4 36 42-83 26-62 (343)
426 2weu_A Tryptophan 5-halogenase 90.7 0.2 6.7E-06 52.2 4.8 34 43-82 2-38 (511)
427 3cgv_A Geranylgeranyl reductas 90.5 0.22 7.4E-06 49.4 4.8 34 44-83 5-38 (397)
428 2x3n_A Probable FAD-dependent 90.4 0.22 7.5E-06 49.8 4.7 35 43-83 6-40 (399)
429 2i0z_A NAD(FAD)-utilizing dehy 90.3 0.22 7.4E-06 51.2 4.7 35 43-83 26-60 (447)
430 3p1w_A Rabgdi protein; GDI RAB 90.3 0.17 5.7E-06 53.2 3.9 33 44-82 21-53 (475)
431 2qa2_A CABE, polyketide oxygen 90.2 0.25 8.6E-06 51.8 5.2 36 42-83 11-46 (499)
432 3c96_A Flavin-containing monoo 90.2 0.26 9E-06 49.6 5.2 34 44-83 5-39 (410)
433 2o7s_A DHQ-SDH PR, bifunctiona 90.2 0.55 1.9E-05 49.7 7.7 74 5-86 317-401 (523)
434 3i3l_A Alkylhalidase CMLS; fla 90.2 0.23 8E-06 53.4 4.9 33 44-82 24-56 (591)
435 1vkn_A N-acetyl-gamma-glutamyl 90.1 0.68 2.3E-05 46.6 8.0 40 153-200 71-110 (351)
436 3vps_A TUNA, NAD-dependent epi 90.0 0.28 9.5E-06 47.0 4.9 36 42-83 6-42 (321)
437 3rih_A Short chain dehydrogena 89.9 0.42 1.4E-05 46.4 6.2 62 19-86 6-79 (293)
438 3r9u_A Thioredoxin reductase; 89.9 0.27 9.4E-06 46.7 4.8 34 42-81 3-37 (315)
439 3lk7_A UDP-N-acetylmuramoylala 89.8 0.59 2E-05 48.3 7.5 36 42-83 8-43 (451)
440 2zbw_A Thioredoxin reductase; 89.8 0.28 9.7E-06 47.4 4.8 34 43-82 5-38 (335)
441 2bc0_A NADH oxidase; flavoprot 89.8 0.21 7.1E-06 52.1 4.1 62 19-83 7-72 (490)
442 2iid_A L-amino-acid oxidase; f 89.7 0.57 1.9E-05 48.3 7.3 35 42-82 32-66 (498)
443 3k7m_X 6-hydroxy-L-nicotine ox 89.7 0.28 9.5E-06 49.5 4.8 33 44-82 2-34 (431)
444 2vdc_G Glutamate synthase [NAD 89.6 0.32 1.1E-05 50.5 5.3 36 42-83 121-156 (456)
445 3d1c_A Flavin-containing putat 89.6 0.28 9.7E-06 48.1 4.7 34 43-82 4-38 (369)
446 3uw3_A Aspartate-semialdehyde 89.5 1.3 4.4E-05 45.0 9.5 42 153-199 62-103 (377)
447 2aqj_A Tryptophan halogenase, 89.1 0.36 1.2E-05 50.8 5.3 34 43-82 5-41 (538)
448 3k31_A Enoyl-(acyl-carrier-pro 89.1 0.54 1.8E-05 45.5 6.2 36 43-84 30-68 (296)
449 4id9_A Short-chain dehydrogena 89.1 0.33 1.1E-05 47.4 4.7 36 42-83 18-54 (347)
450 3urh_A Dihydrolipoyl dehydroge 89.0 0.33 1.1E-05 50.4 4.8 33 44-82 26-58 (491)
451 3ppi_A 3-hydroxyacyl-COA dehyd 88.9 0.45 1.5E-05 45.3 5.4 37 44-86 31-68 (281)
452 3m2p_A UDP-N-acetylglucosamine 88.9 0.43 1.5E-05 45.9 5.3 34 43-82 2-36 (311)
453 3fmw_A Oxygenase; mithramycin, 88.8 0.3 1E-05 52.2 4.6 34 44-83 50-83 (570)
454 3lzw_A Ferredoxin--NADP reduct 88.8 0.33 1.1E-05 46.6 4.4 34 43-82 7-40 (332)
455 3h28_A Sulfide-quinone reducta 88.8 0.39 1.3E-05 48.9 5.2 35 43-83 2-38 (430)
456 4a9w_A Monooxygenase; baeyer-v 88.8 0.34 1.2E-05 46.8 4.5 34 44-83 4-37 (357)
457 4g6h_A Rotenone-insensitive NA 88.7 0.27 9.4E-06 51.6 4.1 36 42-83 41-76 (502)
458 3ko8_A NAD-dependent epimerase 88.7 0.41 1.4E-05 45.9 5.0 35 44-84 1-36 (312)
459 1y0p_A Fumarate reductase flav 88.7 0.4 1.4E-05 50.9 5.3 53 24-82 107-159 (571)
460 3nyc_A D-arginine dehydrogenas 88.5 0.28 9.6E-06 48.2 3.7 33 43-82 9-41 (381)
461 3lxd_A FAD-dependent pyridine 88.5 0.4 1.4E-05 48.5 5.0 35 42-82 8-44 (415)
462 1vdc_A NTR, NADPH dependent th 88.4 0.23 7.7E-06 48.1 2.9 31 44-80 9-39 (333)
463 2pyx_A Tryptophan halogenase; 88.3 0.4 1.4E-05 50.3 5.0 34 43-82 7-52 (526)
464 2dvm_A Malic enzyme, 439AA lon 88.3 0.67 2.3E-05 48.1 6.6 36 43-81 186-225 (439)
465 3d7l_A LIN1944 protein; APC893 88.3 0.47 1.6E-05 42.5 4.9 35 42-83 2-37 (202)
466 3o38_A Short chain dehydrogena 88.3 0.46 1.6E-05 44.8 5.0 39 42-86 21-61 (266)
467 3i6i_A Putative leucoanthocyan 88.3 0.42 1.4E-05 46.9 4.8 34 43-82 10-44 (346)
468 2q0l_A TRXR, thioredoxin reduc 88.2 0.4 1.4E-05 45.8 4.6 32 44-81 2-34 (311)
469 2r6j_A Eugenol synthase 1; phe 88.2 0.39 1.3E-05 46.4 4.5 34 44-83 12-46 (318)
470 2c20_A UDP-glucose 4-epimerase 88.2 0.49 1.7E-05 45.7 5.3 35 43-83 1-36 (330)
471 4eso_A Putative oxidoreductase 88.2 0.71 2.4E-05 43.5 6.2 39 42-86 7-46 (255)
472 3c4a_A Probable tryptophan hyd 88.1 0.46 1.6E-05 47.4 5.1 35 44-83 1-36 (381)
473 2bka_A CC3, TAT-interacting pr 88.1 0.57 1.9E-05 43.1 5.4 37 43-85 18-57 (242)
474 2dkn_A 3-alpha-hydroxysteroid 88.0 0.55 1.9E-05 43.3 5.3 34 44-83 2-36 (255)
475 2jae_A L-amino acid oxidase; o 88.0 0.57 2E-05 48.2 5.9 34 43-82 11-44 (489)
476 1rpn_A GDP-mannose 4,6-dehydra 88.0 0.52 1.8E-05 45.6 5.3 40 39-84 10-50 (335)
477 2e1m_A L-glutamate oxidase; L- 87.9 0.77 2.6E-05 46.6 6.7 34 42-81 43-76 (376)
478 2xve_A Flavin-containing monoo 87.9 0.43 1.5E-05 49.4 4.9 33 44-82 3-41 (464)
479 1yb1_A 17-beta-hydroxysteroid 87.9 0.8 2.7E-05 43.4 6.5 38 43-86 31-69 (272)
480 1xhl_A Short-chain dehydrogena 87.8 0.49 1.7E-05 45.8 5.0 60 14-86 4-64 (297)
481 2b0j_A 5,10-methenyltetrahydro 87.6 2.8 9.6E-05 41.1 9.9 117 147-279 128-247 (358)
482 3sx6_A Sulfide-quinone reducta 87.5 0.46 1.6E-05 48.5 4.8 35 43-83 4-41 (437)
483 2c2x_A Methylenetetrahydrofola 87.5 0.89 3E-05 44.4 6.5 36 41-80 156-192 (281)
484 4egb_A DTDP-glucose 4,6-dehydr 87.5 0.43 1.5E-05 46.5 4.3 37 42-82 23-60 (346)
485 3tjr_A Short chain dehydrogena 87.4 0.85 2.9E-05 44.2 6.4 39 42-86 30-69 (301)
486 3cxt_A Dehydrogenase with diff 87.3 0.67 2.3E-05 44.8 5.6 37 44-86 35-72 (291)
487 2ivd_A PPO, PPOX, protoporphyr 87.3 0.41 1.4E-05 49.0 4.3 37 40-82 13-49 (478)
488 3ab1_A Ferredoxin--NADP reduct 87.2 0.54 1.8E-05 46.1 4.9 34 43-82 14-47 (360)
489 2b4q_A Rhamnolipids biosynthes 87.2 0.65 2.2E-05 44.4 5.4 38 43-86 29-67 (276)
490 3pvc_A TRNA 5-methylaminomethy 87.2 0.49 1.7E-05 51.5 5.0 33 44-82 265-297 (689)
491 2ydy_A Methionine adenosyltran 87.2 0.5 1.7E-05 45.4 4.6 34 44-83 3-37 (315)
492 2a35_A Hypothetical protein PA 87.2 0.44 1.5E-05 42.9 3.9 35 43-83 5-42 (215)
493 4e2x_A TCAB9; kijanose, tetron 87.2 0.57 1.9E-05 47.4 5.2 37 42-83 318-354 (416)
494 3ics_A Coenzyme A-disulfide re 87.1 0.65 2.2E-05 49.3 5.8 38 42-83 35-72 (588)
495 2cul_A Glucose-inhibited divis 87.1 0.59 2E-05 43.4 4.9 33 44-82 4-36 (232)
496 2jl1_A Triphenylmethane reduct 87.0 0.38 1.3E-05 45.5 3.6 37 44-85 1-39 (287)
497 2q1w_A Putative nucleotide sug 86.9 0.67 2.3E-05 45.1 5.4 35 43-83 21-56 (333)
498 3ihg_A RDME; flavoenzyme, anth 86.8 0.54 1.8E-05 49.3 4.9 35 43-83 5-39 (535)
499 2rh8_A Anthocyanidin reductase 86.8 0.7 2.4E-05 44.8 5.5 36 43-84 9-45 (338)
500 3cty_A Thioredoxin reductase; 86.7 0.64 2.2E-05 44.7 5.1 32 44-81 17-48 (319)
No 1
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-68 Score=550.73 Aligned_cols=340 Identities=21% Similarity=0.290 Sum_probs=285.6
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCC-C--CCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchh
Q 012349 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGY-L--RDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYV 117 (465)
Q Consensus 41 ~~~mkIaIIGaGamGsalA~~La~~~G~-~--~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~ 117 (465)
.++.||+|||+|+||||||..|+++ |. . ...++|++|.|+++... +.+.+.|++.+ +|++|||++
T Consensus 32 ~~p~KI~ViGaGsWGTALA~~la~n-g~~~~~~~~~~V~lw~r~~e~~~----~~~~e~in~~~-------~N~~YLpgv 99 (391)
T 4fgw_A 32 EKPFKVTVIGSGNWGTTIAKVVAEN-CKGYPEVFAPIVQMWVFEEEING----EKLTEIINTRH-------QNVKYLPGI 99 (391)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHH-HHHCTTTEEEEEEEECCCCBSSS----CBHHHHHTTTC-------CBTTTBTTC
T ss_pred CCCCeEEEECcCHHHHHHHHHHHHc-CCCccccCCceEEEEEcchHhhh----HHHHHHHHhcC-------cCcccCCCC
Confidence 3467999999999999999999998 50 0 00025999999986432 34566677765 599999976
Q ss_pred hhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEee
Q 012349 118 EARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (465)
Q Consensus 118 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~ 197 (465)
.|| .++.+++|++++++++|+||++||+++++++++++++++++ +.++|+++
T Consensus 100 -------~Lp------------------~~i~~t~dl~~al~~ad~ii~avPs~~~r~~l~~l~~~~~~---~~~iv~~~ 151 (391)
T 4fgw_A 100 -------TLP------------------DNLVANPDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHVDS---HVRAISCL 151 (391)
T ss_dssp -------CCC------------------SSEEEESCHHHHHTTCSEEEECSCGGGHHHHHHHHTTTSCT---TCEEEECC
T ss_pred -------cCC------------------CCcEEeCCHHHHHhcCCEEEEECChhhhHHHHHHhccccCC---CceeEEec
Confidence 232 26899999999999999999999999999999999999887 78999999
Q ss_pred ccccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeC-C---------hhHHHHHHHHHcCC
Q 012349 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICG-A---------EKWRKPLAKFLRRP 267 (465)
Q Consensus 198 kGi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~-~---------~~~~~~l~~ll~~~ 267 (465)
||++..+. ..+++++++.+.++. ++++++|||||.|++.+.|+.+++++ + +...+.++++|+++
T Consensus 152 KGie~~~~---~~~~~se~i~e~~~~---~~~vLsGPs~A~EVa~~~pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~~ 225 (391)
T 4fgw_A 152 KGFEVGAK---GVQLLSSYITEELGI---QCGALSGANIATEVAQEHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHRP 225 (391)
T ss_dssp CSCEEETT---EEECHHHHHHHHHCC---EEEEEECSCCHHHHHTTCCEEEEEECCCCTTCCCSSSSCCHHHHHHHHCBT
T ss_pred cccccccc---cchhHHHHHHHHhCc---cceeccCCchHHHhhcCCCceEEEEecChhhhhhhhHHHHHHHHHHHhCCC
Confidence 99987631 347899999998873 57899999999999999999887643 2 12468899999999
Q ss_pred CCeEEecCChHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHh---CCCcchhccC-chhhhhh
Q 012349 268 HFTVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLL---AEEPEKLAGP-LLADTYV 343 (465)
Q Consensus 268 g~~v~~s~Di~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~---G~~~~t~~g~-glgDl~~ 343 (465)
+|++|.++|++|+|+|||+|||||||+||++|+++| +|++|+||++|++||.+|+.++ |.++.||.|+ |+|||++
T Consensus 226 ~frvy~s~DviGvElgGAlKNViAIAaGi~dGlg~G-~NakAALitrGl~Em~rlg~al~~~g~~~tt~~glaGlGDLi~ 304 (391)
T 4fgw_A 226 YFHVSVIEDVAGISICGALKNVVALGCGFVEGLGWG-NNASAAIQRVGLGEIIRFGQMFFPESREETYYQESAGVADLIT 304 (391)
T ss_dssp TEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHSTTTHHHHHH
T ss_pred CEEEEEeCCccceehHHHHHHHHHHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHHhcccCCceeecCCCcccceeE
Confidence 999999999999999999999999999999999997 7999999999999999999999 4456678887 9999999
Q ss_pred cccCchhHHHHHHHhc-CCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012349 344 TLLKGRNAWYGQELAK-GRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 422 (465)
Q Consensus 344 T~~~sRN~~~G~~l~~-g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~ 422 (465)
||+.||||+||+.|++ |++.+++++++.+++++||+.|+++++++++++|+. .+ |||+++||+|||
T Consensus 305 Tc~sSRNr~~G~~lg~~G~~~~~~~~~~~~g~v~EGv~ta~~v~~l~~~~~v~------------~e-mPI~~~vy~IL~ 371 (391)
T 4fgw_A 305 TCAGGRNVKVARLMATSGKDAWECEKELLNGQSAQGLITCKEVHEWLETCGSV------------ED-FPLFEAVYQIVY 371 (391)
T ss_dssp HHHSSHHHHHHHHHHHTCCCHHHHHHHHHTTCCCTHHHHHHHHHHHHHHHTCS------------TT-CHHHHHHHHHHH
T ss_pred EecCCccHHHHHHHHhcCCCHHHHHHHHhCCCEEehHHHHHHHHHHHHHcCCC------------CC-CCHHHHHHHHHh
Confidence 9988999999999996 899988888776667999999999999999999952 25 899999999999
Q ss_pred cCCCHHHHHHHHHhcccC
Q 012349 423 MRESPIQAILEALRDETM 440 (465)
Q Consensus 423 ~~~~~~~~~~~ll~~~~~ 440 (465)
++.+|.+....++++..+
T Consensus 372 ~~~~~~~~~~~l~~~~~~ 389 (391)
T 4fgw_A 372 NNYPMKNLPDMIEELDLH 389 (391)
T ss_dssp SCCCSTTHHHHHCC----
T ss_pred CCCCHHHHHHHHHhcccC
Confidence 998776655444443433
No 2
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=100.00 E-value=7.9e-62 Score=498.29 Aligned_cols=325 Identities=22% Similarity=0.328 Sum_probs=289.4
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
.+|||+|||+|+||+++|..|+++ | ++|++|+|+++.++.++ +.+ .|+.|+|+.
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~-G-----~~V~l~~r~~~~~~~i~---------~~~-------~~~~~l~g~---- 81 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARK-G-----QKVRLWSYESDHVDEMQ---------AEG-------VNNRYLPNY---- 81 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSCHHHHHHHH---------HHS-------SBTTTBTTC----
T ss_pred cCCeEEEECccHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHHH---------HcC-------CCcccCCCC----
Confidence 358999999999999999999999 7 99999999987766533 222 366777764
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
.+| .++.+++|+++++.++|+||++||+++++++++++.+++++ ++++|+++||++
T Consensus 82 ---~l~------------------~~i~~t~d~~ea~~~aDvVilaVp~~~~~~vl~~i~~~l~~---~~ivvs~~kGi~ 137 (356)
T 3k96_A 82 ---PFP------------------ETLKAYCDLKASLEGVTDILIVVPSFAFHEVITRMKPLIDA---KTRIAWGTKGLA 137 (356)
T ss_dssp ---CCC------------------TTEEEESCHHHHHTTCCEEEECCCHHHHHHHHHHHGGGCCT---TCEEEECCCSCB
T ss_pred ---ccC------------------CCeEEECCHHHHHhcCCEEEECCCHHHHHHHHHHHHHhcCC---CCEEEEEeCCCC
Confidence 121 25788999999999999999999999999999999999887 789999999999
Q ss_pred ccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEE-eCChhHHHHHHHHHcCCCCeEEecCChHHH
Q 012349 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRRPHFTVWDNGDLVTH 280 (465)
Q Consensus 202 ~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~-~~~~~~~~~l~~ll~~~g~~v~~s~Di~gv 280 (465)
++ + .++++++++.+|. .++++++||+|+.|++.+.++.+++ +.+++.++.++++|++.+|++|+++|++|+
T Consensus 138 ~~-----t-~~~se~i~~~l~~--~~~~vlsgP~~a~ev~~g~pt~~via~~~~~~~~~v~~lf~~~~~rv~~~~Di~g~ 209 (356)
T 3k96_A 138 KG-----S-RLLHEVVATELGQ--VPMAVISGPSLATEVAANLPTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGV 209 (356)
T ss_dssp TT-----T-BCHHHHHHHHHCS--CCEEEEESSCCHHHHHTTCCEEEEEEESCHHHHHHHHHHHCCSSEEEEEESCHHHH
T ss_pred cC-----c-cCHHHHHHHHcCC--CCEEEEECccHHHHHHcCCCeEEEEecCCHHHHHHHHHHhCCCCeeEEEeCCHHHH
Confidence 86 5 7899999999873 4678999999999999999887765 457788899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccC-chhhhhhccc--CchhHHHHHHH
Q 012349 281 EVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLL--KGRNAWYGQEL 357 (465)
Q Consensus 281 e~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~-glgDl~~T~~--~sRN~~~G~~l 357 (465)
||+|++||++|+++|+++|++++ +|+++++++++++||.++++++|++++||+|+ |+|||++||+ .||||+||..|
T Consensus 210 e~~galkNviaia~G~~~gl~~g-~N~~aal~~~~l~E~~~l~~a~G~~~~t~~gl~g~gDl~~tc~s~~sRN~~~G~~l 288 (356)
T 3k96_A 210 ELCGSVKNILAIATGISDGLKLG-SNARAALITRGLTEMGRLVSVFGGKQETLTGLAGLGDLVLTCTDNQSRNRRFGLAL 288 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC-HHHHHHHHHHHHHHHHHHHHHTTCCHHHHTSTTTHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhccCC-chHHHHHHHHHHHHHHHHHHHhCCChHhhcccchhhHHHHhccCCCCccHHHHHHH
Confidence 99999999999999999999997 78899999999999999999999999999997 9999999996 59999999999
Q ss_pred hcCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhcCCCHHHHHHHHHhc
Q 012349 358 AKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIMRESPIQAILEALRD 437 (465)
Q Consensus 358 ~~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~~~~~~~~~~~~ll~~ 437 (465)
++|++++++++++ ++++||++|+++++++++++|+ + +||+++||+||+++.+|.+++..||.|
T Consensus 289 ~~g~~~~~~~~~~--~~~~eG~~t~~~~~~la~~~~v--------------~-~Pi~~~v~~il~~~~~~~~~~~~l~~r 351 (356)
T 3k96_A 289 GEGVDKKEAQQAI--GQAIEGLYNTDQVHALAQKHAI--------------E-MPLTFQVHRILHEDLDPQQAVQELLER 351 (356)
T ss_dssp HHTCCHHHHHHHH--CSCCSHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHHSCCCHHHHHHHHHSC
T ss_pred HCCCCHHHHHHHc--CCccchHHHHHHHHHHHHHcCC--------------C-CcHHHHHHHHHhCCCCHHHHHHHHHcC
Confidence 9999998887766 4689999999999999999994 7 899999999999999999999999999
Q ss_pred ccCCC
Q 012349 438 ETMND 442 (465)
Q Consensus 438 ~~~~~ 442 (465)
+.|.|
T Consensus 352 ~~~~e 356 (356)
T 3k96_A 352 SPKAE 356 (356)
T ss_dssp C----
T ss_pred CCCCC
Confidence 98865
No 3
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=100.00 E-value=2.4e-45 Score=377.37 Aligned_cols=344 Identities=23% Similarity=0.333 Sum_probs=281.8
Q ss_pred HhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCC--CeeEEEEecCch-----hhhhhhhhhhHHHHhchhhhH
Q 012349 32 LRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRD--KVLIRIWRRPGR-----SVDRATAEHLFEVINSREDVL 104 (465)
Q Consensus 32 ~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~--~~~V~l~~r~~~-----~~~~i~~~~l~~~i~~~~~~~ 104 (465)
.|+||.....++|||+|||+|+||+++|..|+++ |...+ .++|++|+|+++ .++. +++.+
T Consensus 10 ~~~~~~~~~~~~~kI~iIGaG~mG~alA~~L~~~-G~~~~~~~~~V~~~~r~~~~~~~~~~~~---------l~~~~--- 76 (375)
T 1yj8_A 10 YRNLFDKLKDGPLKISILGSGNWASAISKVVGTN-AKNNYLFENEVRMWIRDEFVNGERMVDI---------INNKH--- 76 (375)
T ss_dssp CCSHHHHHHHSCBCEEEECCSHHHHHHHHHHHHH-HHHCTTBCSCEEEECCSCC---CCHHHH---------HHHHC---
T ss_pred HHHHHhcCccCCCEEEEECcCHHHHHHHHHHHHc-CCccCCCCCeEEEEECChhhhhHHHHHH---------HHhcC---
Confidence 3555554444568999999999999999999988 41000 068999999987 4443 22221
Q ss_pred HhhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHH--
Q 012349 105 RRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISR-- 182 (465)
Q Consensus 105 ~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~-- 182 (465)
.+..|+++. .++ .++.+++|+++++.++|+||+|||+++++++++++.+
T Consensus 77 ----~~~~~~~~~-------~~~------------------~~i~~~~~~~ea~~~aDvVilav~~~~~~~vl~~i~~~~ 127 (375)
T 1yj8_A 77 ----ENTKYLKGV-------PLP------------------HNIVAHSDLASVINDADLLIFIVPCQYLESVLASIKESE 127 (375)
T ss_dssp ----BCTTTSTTC-------BCC------------------TTEEEESSTHHHHTTCSEEEECCCHHHHHHHHHHHTC--
T ss_pred ----cccccCCcc-------cCc------------------CCeEEECCHHHHHcCCCEEEEcCCHHHHHHHHHHHhhhh
Confidence 244455432 111 2577888988888999999999999999999999998
Q ss_pred --hhhccCCCCEEEEeeccccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEe-CChhHHHH
Q 012349 183 --YWKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC-GAEKWRKP 259 (465)
Q Consensus 183 --~l~~~~~~~ivIs~~kGi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~-~~~~~~~~ 259 (465)
++++ ++++|+++||+++.. .+...+++.+.+.++ .++.+++||+++.++..+.++.++++ .+++..+.
T Consensus 128 ~~~l~~---~~ivvs~~~Gi~~~~---~~~~~l~~~l~~~~~---~~~~v~~gp~~a~~v~~g~~~~~~~~~~~~~~~~~ 198 (375)
T 1yj8_A 128 SIKIAS---HAKAISLTKGFIVKK---NQMKLCSNYISDFLN---IPCSALSGANIAMDVAMENFSEATIGGNDKDSLVI 198 (375)
T ss_dssp -CCCCT---TCEEEECCCSCEEET---TEEECHHHHHHHHSS---SCEEEEECSCCHHHHHTTCCEEEEEECSCHHHHHH
T ss_pred hccCCC---CCEEEEeCCccccCC---ccccCHHHHHHHHcC---CCEEEEeCCchHHHHHhCCCeEEEEecCCHHHHHH
Confidence 8876 789999999998730 024567888887765 34678999999999998887766654 46677899
Q ss_pred HHHHHcCCCCeEEecCChHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHh--CCCcchhccC-
Q 012349 260 LAKFLRRPHFTVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLL--AEEPEKLAGP- 336 (465)
Q Consensus 260 l~~ll~~~g~~v~~s~Di~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~--G~~~~t~~g~- 336 (465)
++++|++.+|+++.++|+.+++|++++||++++++|++++++++ +|...++++++++|+..+++++ |.+++++.++
T Consensus 199 v~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~~~~~~-~n~~~a~~~~~~~E~~~la~a~G~G~~~~~~~~~~ 277 (375)
T 1yj8_A 199 WQRVFDLPYFKINCVNETIEVEICGALKNIITLACGFCDGLNLP-TNSKSAIIRNGINEMILFGKVFFQKFNENILLESC 277 (375)
T ss_dssp HHHHHCBTTEEEEEESCSHHHHHHHHHHHHHHHHHHHHHHTTCC-HHHHHHHHHHHHHHHHHHHHHHSSCCCGGGGGSTT
T ss_pred HHHHhCCCCeEEEEeCCcHHHHHHHHHHHHHHHHHHHHhhccCC-hhHHHHHHHHHHHHHHHHHHHhccCCCcchhhccc
Confidence 99999999999999999999999999999999999999999997 5677789999999999999999 5889999885
Q ss_pred chhhhhhcccCchhHHHHHHHhc-C--CChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcH
Q 012349 337 LLADTYVTLLKGRNAWYGQELAK-G--RLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPI 413 (465)
Q Consensus 337 glgDl~~T~~~sRN~~~G~~l~~-g--~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi 413 (465)
|+||++.||..|||+++|..+++ | .+++++++++.+++..||..++++++++++++|+. .+ +|+
T Consensus 278 g~~dl~~t~~~~~~~~~~~~~~~~g~~~~~~d~~~~~~~g~~~E~~~~~~~v~~~a~~~gv~------------~~-~P~ 344 (375)
T 1yj8_A 278 GFADIITSFLAGRNAKCSAEFIKSTPKKTWEELENEILKGQKLQGTVTLKYVYHMIKEKNMT------------NE-FPL 344 (375)
T ss_dssp THHHHHHHHSSSSHHHHHHHHHHHTTSSCHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCG------------GG-CHH
T ss_pred cccceeEeeeCCccHHHHHHHHhcCCCCCHHHHHHhhcCCcEeeHHHHHHHHHHHHHHhCCC------------CC-CCH
Confidence 89999999988999999999998 8 67777766554567899999999999999999940 06 899
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHhcccC
Q 012349 414 LKMLYKILIMRESPIQAILEALRDETM 440 (465)
Q Consensus 414 ~~~vy~il~~~~~~~~~~~~ll~~~~~ 440 (465)
++++|++++++.+|.+++..||.++.+
T Consensus 345 ~~~v~~~~~~~~~~~~~~~~l~~~~~~ 371 (375)
T 1yj8_A 345 FTVLHKISFENEDPSSLLKTFMNNKIN 371 (375)
T ss_dssp HHHHHHHHHSCCCTTHHHHHHSSCCCC
T ss_pred HHHHHHHHhCCCCHHHHHHHHHcCcHh
Confidence 999999999999999999999987553
No 4
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=100.00 E-value=4.7e-42 Score=348.73 Aligned_cols=332 Identities=22% Similarity=0.313 Sum_probs=273.1
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCC--CeeEEEEecCch-----hhhhhhhhhhHHHHhchhhhHHhhhhcccccc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRD--KVLIRIWRRPGR-----SVDRATAEHLFEVINSREDVLRRLIRRCAYLK 115 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~--~~~V~l~~r~~~-----~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~ 115 (465)
+|||+|||+|+||+++|..|+++ |...+ +++|++|+|+++ .++. +++.+ .+..|++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~-g~~~~~~~~~V~~~~r~~~~~~~~~~~~---------l~~~~-------~~~~~~~ 70 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN-AAQLAQFDPRVTMWVFEEDIGGKKLTEI---------INTQH-------ENVKYLP 70 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-HHHCTTEEEEEEEECCCCBSSSSBHHHH---------HHHHS-------CCTTTST
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-CCcccCCCCeEEEEEcChhhhhhHHHHH---------HHhcC-------cccccCC
Confidence 47999999999999999999988 41000 068999999987 4433 22211 1223333
Q ss_pred hhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEE
Q 012349 116 YVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIIS 195 (465)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs 195 (465)
+. .++ .++.+++|+++++.++|+||+|||++.++++++++.+++++ +++||+
T Consensus 71 ~~-------~~~------------------~~~~~~~~~~~~~~~aD~Vilav~~~~~~~v~~~i~~~l~~---~~ivv~ 122 (354)
T 1x0v_A 71 GH-------KLP------------------PNVVAVPDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKA---NATGIS 122 (354)
T ss_dssp TC-------CCC------------------TTEEEESSHHHHHTTCSEEEECCCGGGHHHHHHHHTTCSCT---TCEEEE
T ss_pred cc-------cCc------------------cCeEEEcCHHHHHcCCCEEEEeCCHHHHHHHHHHHHhhCCC---CCEEEE
Confidence 21 110 14677889988889999999999999999999999998876 789999
Q ss_pred eeccccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEe-CChhHHHHHHHHHcCCCCeEEec
Q 012349 196 LAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC-GAEKWRKPLAKFLRRPHFTVWDN 274 (465)
Q Consensus 196 ~~kGi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~-~~~~~~~~l~~ll~~~g~~v~~s 274 (465)
++||+..+. .+...+++.+.+.+| .+.++++||+++.++..+.++.++++ .+++..+.++++|+..+++++.+
T Consensus 123 ~~~Gi~~~~---~~~~~l~~~l~~~~~---~~~~v~~gp~~a~~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~~ 196 (354)
T 1x0v_A 123 LIKGVDEGP---NGLKLISEVIGERLG---IPMSVLMGANIASEVADEKFCETTIGCKDPAQGQLLKELMQTPNFRITVV 196 (354)
T ss_dssp CCCCBCSSS---SSCCBHHHHHHHHHT---CCEEEEECSCCHHHHHTTCCEEEEEECSSHHHHHHHHHHHCBTTEEEEEE
T ss_pred ECCccCCCC---CccccHHHHHHHHcC---CCEEEEECCCcHHHHHhcCCceEEEEECCHHHHHHHHHHhCCCCEEEEEc
Confidence 999998510 034567788887776 24678999999999988887665554 45677899999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCC---CcchhccC-chhhhhhcccCchh
Q 012349 275 GDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAE---EPEKLAGP-LLADTYVTLLKGRN 350 (465)
Q Consensus 275 ~Di~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~---~~~t~~g~-glgDl~~T~~~sRN 350 (465)
+|+.+++|++++||++++++|++.+++++ +|...++++++++|+..+++++|. +++++.++ |++|++.||..|||
T Consensus 197 ~di~~~~~~k~~~N~~~~~~g~~~~~~~~-~n~~~~~~~~~~~E~~~la~a~G~~~~~~~~~~~~~g~~d~~~~~~~~~~ 275 (354)
T 1x0v_A 197 QEVDTVEICGALKNVVAVGAGFCDGLGFG-DNTKAAVIRLGLMEMIAFAKLFCSGPVSSATFLESCGVADLITTCYGGRN 275 (354)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHTTCC-HHHHHHHHHHHHHHHHHHHHHHSSSCCCGGGGGSTTTHHHHHHHHHHCHH
T ss_pred CCchHhHHHHHHHHHHHHHHHHHHHccCC-ccHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccchHHHHHHhhccccc
Confidence 99999999999999999999999999997 567778999999999999999998 89999885 89999999988999
Q ss_pred HHHHHHHhc-CCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhcCCCHHH
Q 012349 351 AWYGQELAK-GRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIMRESPIQ 429 (465)
Q Consensus 351 ~~~G~~l~~-g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~~~~~~~~ 429 (465)
+++|..+++ |++++++.+++.+++..||..++..++++++++|++ .+ +|+++++|++++++++|.+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~~g~v~~~a~~~gv~------------~~-~P~~~~v~~~~~~~~~~~~ 342 (354)
T 1x0v_A 276 RKVAEAFARTGKSIEQLEKELLNGQKLQGPETARELYSILQHKGLV------------DK-FPLFMAVYKVCYEGQPVGE 342 (354)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHTCG------------GG-SHHHHHHHHHHHSCCCGGG
T ss_pred HHHHHHHHhcCCCHHHHHHhhcCCcEeehHHHHHHHHHHHHHhCCC------------CC-CCHHHHHHHHHhCCCCHHH
Confidence 999999997 888777766554567899999999999999999930 16 8999999999999999999
Q ss_pred HHHHHHhccc
Q 012349 430 AILEALRDET 439 (465)
Q Consensus 430 ~~~~ll~~~~ 439 (465)
++.+||.++.
T Consensus 343 ~~~~l~~~~~ 352 (354)
T 1x0v_A 343 FIHCLQNHPE 352 (354)
T ss_dssp THHHHHTCCS
T ss_pred HHHHHHcCCC
Confidence 9999998753
No 5
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=100.00 E-value=1e-41 Score=344.99 Aligned_cols=319 Identities=24% Similarity=0.413 Sum_probs=262.6
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
++|||+|||+|+||+++|..|+++ | ++|++|+|++++++.++. .+ .+. |+++..
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~-G-----~~V~~~~r~~~~~~~l~~---------~g-------~~~-~~~~~~--- 66 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHEN-G-----EEVILWARRKEIVDLINV---------SH-------TSP-YVEESK--- 66 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSHHHHHHHHH---------HS-------CBT-TBTTCC---
T ss_pred cCCcEEEECcCHHHHHHHHHHHhC-C-----CeEEEEeCCHHHHHHHHH---------hC-------Ccc-cCCCCe---
Confidence 468999999999999999999999 8 999999999877665322 11 122 443310
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
+ ++.+++++++ ++++|+||+|||+++++++++++.+ + ++++|+++||++
T Consensus 67 -----------------------~-~~~~~~~~~~-~~~aDvVil~vk~~~~~~v~~~l~~---~---~~~vv~~~nGi~ 115 (335)
T 1z82_A 67 -----------------------I-TVRATNDLEE-IKKEDILVIAIPVQYIREHLLRLPV---K---PSMVLNLSKGIE 115 (335)
T ss_dssp -----------------------C-CSEEESCGGG-CCTTEEEEECSCGGGHHHHHTTCSS---C---CSEEEECCCCCC
T ss_pred -----------------------e-eEEEeCCHHH-hcCCCEEEEECCHHHHHHHHHHhCc---C---CCEEEEEeCCCC
Confidence 1 3567788888 8899999999999999999988766 3 689999999998
Q ss_pred ccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCChHHHH
Q 012349 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVTHE 281 (465)
Q Consensus 202 ~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~gve 281 (465)
++ +...+++.+.+.++ ....++.||+++.++..|.++.+++++.+ .+.++++|+..+++++.++|+.|++
T Consensus 116 ~~-----~~~~l~~~~~~~~~---~~~~~~~~P~~~~~~~~g~~~~~~~g~~~--~~~~~~ll~~~g~~~~~~~di~~~~ 185 (335)
T 1z82_A 116 IK-----TGKRVSEIVEEILG---CPYAVLSGPSHAEEVAKKLPTAVTLAGEN--SKELQKRISTEYFRVYTCEDVVGVE 185 (335)
T ss_dssp TT-----TCCCHHHHHHHHTC---CCEEEEESSCCHHHHHTTCCEEEEEEETT--HHHHHHHHCCSSEEEEEESCHHHHH
T ss_pred CC-----ccCcHHHHHHHHcC---CceEEEECCccHHHHhCCCceEEEEEehh--HHHHHHHhCCCCEEEEecCchHHHH
Confidence 76 35678888877664 34678999999999998887655555443 7899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccC-chhhhhhccc--CchhHHHHHHHh
Q 012349 282 VMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLL--KGRNAWYGQELA 358 (465)
Q Consensus 282 ~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~-glgDl~~T~~--~sRN~~~G~~l~ 358 (465)
|++++||++++++|+..+++++ +|...+++..++.|+..+++++|.+++++.++ +++|++.||. .+||+++|+++.
T Consensus 186 ~~k~l~N~~~~~~g~~~g~~~~-~n~~~a~~~~~~~E~~~la~a~G~~~~~~~~l~~~~~~~~t~~s~~~~n~~~~~~~~ 264 (335)
T 1z82_A 186 IAGALKNVIAIAAGILDGFGGW-DNAKAALETRGIYEIARFGMFFGADQKTFMGLAGIGDLMVTCNSRYSRNRRFGELIA 264 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCC-HHHHHHHHHHHHHHHHHHHHHTTCCHHHHTSTTTHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHhcCCCC-chhHHHHHHHHHHHHHHHHHHhCCChhhhcccccccceeeeccCccCcHHHHHHHHh
Confidence 9999999999999999999887 66777899999999999999999999998886 7999998884 699999999999
Q ss_pred cCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhcCCCHHHHHHHHHhcc
Q 012349 359 KGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIMRESPIQAILEALRDE 438 (465)
Q Consensus 359 ~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~~~~~~~~~~~~ll~~~ 438 (465)
+|++++++... .+.++||....+.++++++++|+ + +|+++++|++++++.+|.+++..||.++
T Consensus 265 ~g~~~~~~~~~--~g~~~e~~~~~~~v~~~a~~~gv--------------~-~P~~~~v~~~~~~~~~~~~~~~~l~~~~ 327 (335)
T 1z82_A 265 RGFNPLKLLES--SNQVVEGAFTVKAVMKIAKENKI--------------D-MPISEEVYRVVYEGKPPLQSMRDLMRRS 327 (335)
T ss_dssp HTCCHHHHHHT--CSSCCTHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHHSCCCHHHHHHHHHC--
T ss_pred CCCCHHHHHHh--cCCeeeHHHHHHHHHHHHHHhCC--------------C-CcHHHHHHHHHhCCCCHHHHHHHHHcCC
Confidence 99887665532 24588999999999999999995 6 8999999999999999999999999999
Q ss_pred cCCCccc
Q 012349 439 TMNDPRD 445 (465)
Q Consensus 439 ~~~~~~~ 445 (465)
.+.|+++
T Consensus 328 ~~~~~~~ 334 (335)
T 1z82_A 328 LKDEFWA 334 (335)
T ss_dssp -------
T ss_pred ccccccc
Confidence 9988665
No 6
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=100.00 E-value=2.8e-39 Score=330.48 Aligned_cols=324 Identities=22% Similarity=0.358 Sum_probs=270.3
Q ss_pred eEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhcCC
Q 012349 45 RIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDR 124 (465)
Q Consensus 45 kIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~~ 124 (465)
||+|||+|+||+++|..|+++ | ++|++|+|++++++.++. .+ .+..++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~-G-----~~V~~~~r~~~~~~~l~~---------~~-------~~~~~~~~~------- 67 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK-C-----REVCVWHMNEEEVRLVNE---------KR-------ENVLFLKGV------- 67 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-E-----EEEEEECSCHHHHHHHHH---------HT-------BCTTTSTTC-------
T ss_pred eEEEECCCHHHHHHHHHHHhC-C-----CEEEEEECCHHHHHHHHH---------cC-------ccccccccc-------
Confidence 999999999999999999988 7 999999999876664322 11 123343331
Q ss_pred cccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHH----HHHhhhccCCCCEEEEeeccc
Q 012349 125 TLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEE----ISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 125 ~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~----l~~~l~~~~~~~ivIs~~kGi 200 (465)
.++ .++.+++++++++.++|+||+|||++++++++++ +.+++++. +++||+++||+
T Consensus 68 ~~~------------------~~~~~~~~~~~~~~~aDvVilav~~~~~~~v~~~~~~gl~~~l~~~--~~ivv~~~~gi 127 (366)
T 1evy_A 68 QLA------------------SNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNLIAYAKEK--QVPVLVCTKGI 127 (366)
T ss_dssp BCC------------------TTEEEESCHHHHHTTCSSEEECCCHHHHHHHHHHHCHHHHHHHHHH--TCCEEECCCSC
T ss_pred ccc------------------cceeeeCCHHHHHcCCCEEEECCChHHHHHHHHHhHHHHHHhcCcc--CCEEEEECCcC
Confidence 110 1467788998888999999999999999999999 99888640 26899999999
Q ss_pred cccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEe-CChhHHHHHHHHHcCC--CCeEEecCCh
Q 012349 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC-GAEKWRKPLAKFLRRP--HFTVWDNGDL 277 (465)
Q Consensus 201 ~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~-~~~~~~~~l~~ll~~~--g~~v~~s~Di 277 (465)
.++ +...+++.+.+.+|. .+..++.||+++.++..+.++.+..+ .+++..+.++++|+.. +++++.++|+
T Consensus 128 ~~~-----~~~~~~~~l~~~~~~--~~~~v~~gp~~~~~~~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~g~~~~~~~di 200 (366)
T 1evy_A 128 ERS-----TLKFPAEIIGEFLPS--PLLSVLAGPSFAIEVATGVFTCVSIASADINVARRLQRIMSTGDRSFVCWATTDT 200 (366)
T ss_dssp CTT-----TCCCHHHHHTTTSCG--GGEEEEESSCCHHHHHTTCCEEEEEECSSHHHHHHHHHHHSCTTSSEEEEEESCH
T ss_pred CCc-----cccCHHHHHHHHCCC--CcEEEEeCCChHHHHHhCCceEEEEecCCHHHHHHHHHHhcCCCCeEEEEEcCCc
Confidence 876 356677877776653 35678999999999888877665554 4667789999999999 9999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccC-chhhhhhccc--CchhHHHH
Q 012349 278 VTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLL--KGRNAWYG 354 (465)
Q Consensus 278 ~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~-glgDl~~T~~--~sRN~~~G 354 (465)
.+++|++++||++++++|++.+++++ +|...+++..++.|+..+++++|.+++++.++ +++|++.||. .+||+++|
T Consensus 201 ~~~~~~k~~~n~~~~~~~~~~~~~~~-~n~~~~~~~~~~~E~~~la~a~Gi~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 279 (366)
T 1evy_A 201 VGCEVASAVKNVLAIGSGVANGLGMG-LNARAALIMRGLLEIRDLTAALGGDGSAVFGLAGLGDLQLTCSSELSRNFTVG 279 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCC-HHHHHHHHHHHHHHHHHHHHHTTCCCTTTTSTTTHHHHHHHHTCTTSHHHHHH
T ss_pred hHHHHHHHHHhHHHHHHHHHhhccCC-ccHHHHHHHHHHHHHHHHHHHhCCCCccccccccchhheeeecCCCCchHHHH
Confidence 99999999999999999999999987 56677899999999999999999999888875 7899998884 67999999
Q ss_pred HHHhcCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhcCCCHHHHHHHH
Q 012349 355 QELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIMRESPIQAILEA 434 (465)
Q Consensus 355 ~~l~~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~~~~~~~~~~~~l 434 (465)
+++.+|++.++++.. .+..+||...+..++++++++|+ + +|+++++|++++++.+|.+++..|
T Consensus 280 ~~~~~g~~~~~~~~~--~~~~~e~~~~~~~v~~~a~~~gv--------------~-~P~~~~v~~~~~~~~~~~~~~~~l 342 (366)
T 1evy_A 280 KKLGKGLPIEEIQRT--SKAVAEGVATADPLMRLAKQLKV--------------K-MPLCHQIYEIVYKKKNPRDALADL 342 (366)
T ss_dssp HHHHTTCCHHHHHC-----CCCHHHHHHHHHHHHHHHHTC--------------C-CHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHhCCCCHHHHHHH--cCCeeehHHHHHHHHHHHHHhCC--------------C-CcHHHHHHHHHHCCCCHHHHHHHH
Confidence 999999887655422 23478999999999999999995 6 899999999999999999999999
Q ss_pred HhcccCCC
Q 012349 435 LRDETMND 442 (465)
Q Consensus 435 l~~~~~~~ 442 (465)
|.++.+.|
T Consensus 343 ~~~~~~~~ 350 (366)
T 1evy_A 343 LSCGLQDE 350 (366)
T ss_dssp GGGCSCCC
T ss_pred HcCCcccc
Confidence 99999887
No 7
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=100.00 E-value=7.3e-35 Score=292.79 Aligned_cols=318 Identities=21% Similarity=0.333 Sum_probs=252.6
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEec--CchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRR--PGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r--~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
|||+|||+|+||+++|..|+++ | ++|++|+| +++.++.+ ++.+ .+..+ +.
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~-g-----~~V~~~~r~~~~~~~~~~---------~~~~-------~~~~~--g~---- 52 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDN-G-----NEVRIWGTEFDTEILKSI---------SAGR-------EHPRL--GV---- 52 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH-C-----CEEEEECCGGGHHHHHHH---------HTTC-------CBTTT--TB----
T ss_pred CEEEEECcCHHHHHHHHHHHhC-C-----CeEEEEEccCCHHHHHHH---------HHhC-------cCccc--Cc----
Confidence 6999999999999999999999 7 89999999 77655542 2211 00111 10
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEec--CHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVT--NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~--dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kG 199 (465)
. +.++.+++ ++.+++.++|+||+|||++.++++++++.+ +++ +++||+++||
T Consensus 53 ---~-------------------~~~~~~~~~~~~~~~~~~~D~vi~~v~~~~~~~v~~~i~~-l~~---~~~vv~~~ng 106 (335)
T 1txg_A 53 ---K-------------------LNGVEIFWPEQLEKCLENAEVVLLGVSTDGVLPVMSRILP-YLK---DQYIVLISKG 106 (335)
T ss_dssp ---C-------------------CCSEEEECGGGHHHHHTTCSEEEECSCGGGHHHHHHHHTT-TCC---SCEEEECCCS
T ss_pred ---c-------------------ccceEEecHHhHHHHHhcCCEEEEcCChHHHHHHHHHHhc-CCC---CCEEEEEcCc
Confidence 0 01345666 787888999999999999999999999998 876 6889999999
Q ss_pred c---cccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeC-ChhHHHHHHHHHcCCCCeEEecC
Q 012349 200 V---EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICG-AEKWRKPLAKFLRRPHFTVWDNG 275 (465)
Q Consensus 200 i---~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~-~~~~~~~l~~ll~~~g~~v~~s~ 275 (465)
+ .+. +...+++.+.+.+|.. .+.+++.||+++.+++.+.++.+++++ +++..+.++++|+..+++++..+
T Consensus 107 ~~~~~~~-----~~~~l~~~~~~~~g~~-~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ll~~~g~~~~~~~ 180 (335)
T 1txg_A 107 LIDFDNS-----VLTVPEAVWRLKHDLR-ERTVAITGPAIAREVAKRMPTTVVFSSPSESSANKMKEIFETEYFGVEVTT 180 (335)
T ss_dssp EEEETTE-----EEEHHHHHHTTSTTCG-GGEEEEESSCCHHHHHTTCCEEEEEECSCHHHHHHHHHHHCBTTEEEEEES
T ss_pred CccCCCC-----cCccHHHHHHHhcCCC-CcEEEEECCCcHHHHHccCCcEEEEEeCCHHHHHHHHHHhCCCcEEEEecC
Confidence 9 543 1233445454433321 246789999999998887766555544 56778999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhcccCCC----cchHHHHHHHHHHHHHHHHHHhCCCcchhccC-chhhhhhcccCchh
Q 012349 276 DLVTHEVMGGLKNVYAIGAGMVAALTNES----ATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLLKGRN 350 (465)
Q Consensus 276 Di~gve~~galKNviAia~Gi~~gl~~g~----~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~-glgDl~~T~~~sRN 350 (465)
|+.+.+|+|+++|++++++|++.+++++. +|....++..+++|+..+++++|.+++++.++ +++|++.+|..+||
T Consensus 181 di~~~~~~k~~~N~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~E~~~la~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 260 (335)
T 1txg_A 181 DIIGTEITSALKNVYSIAIAWIRGYESRKNVEMSNAKGVIATRAINEMAELIEILGGDRETAFGLSGFGDLIATFRGGRN 260 (335)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSTTTHHHHHHTTTCHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcchhhcccchhheeeccccCcc
Confidence 99999999999999999999998887650 34456889999999999999999999988875 89999999977999
Q ss_pred HHHHHHHhcCCChhhHhHhhcC-C-cccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhcCCCHH
Q 012349 351 AWYGQELAKGRLTLDLGDSIKG-K-GMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIMRESPI 428 (465)
Q Consensus 351 ~~~G~~l~~g~~~~~~~~~~~~-~-~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~~~~~~~ 428 (465)
+++|..++.|.+..+....+.+ + ...|+......++++++++|+ + +|+++++|++++++.+|.
T Consensus 261 ~~~~~~~~~~~s~~~d~~~~~~~~~~~~E~~~~~~~~~~~a~~~gv--------------~-~P~~~~~~~~~~~~~~~~ 325 (335)
T 1txg_A 261 GMLGELLGKGLSIDEAMEELERRGVGVVEGYKTAEKAYRLSSKINA--------------D-TKLLDSIYRVLYEGLKVE 325 (335)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHhCCCCHHHHHHHhccCCceecchHHHHHHHHHHHHHcCC--------------C-CcHHHHHHHHHhCCCCHH
Confidence 9999999988765332221110 1 468999999999999999994 7 899999999999999999
Q ss_pred HHHHHHHh
Q 012349 429 QAILEALR 436 (465)
Q Consensus 429 ~~~~~ll~ 436 (465)
+++..||.
T Consensus 326 ~~~~~l~~ 333 (335)
T 1txg_A 326 EVLFELAT 333 (335)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 99999885
No 8
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.98 E-value=3.2e-31 Score=266.86 Aligned_cols=282 Identities=15% Similarity=0.143 Sum_probs=205.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
.+|||+|||+|+||+++|..|+++ | ++|++| +++++++.++.+++ +.. .++.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~-G-----~~V~l~-~~~~~~~~i~~~g~----------------~~~-~~~~---- 69 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARA-G-----HEVILI-ARPQHVQAIEATGL----------------RLE-TQSF---- 69 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHT-T-----CEEEEE-CCHHHHHHHHHHCE----------------EEE-CSSC----
T ss_pred cCCcEEEECcCHHHHHHHHHHHHC-C-----CeEEEE-EcHhHHHHHHhCCe----------------EEE-cCCC----
Confidence 568999999999999999999998 7 999999 88777665433221 111 1111
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
.++ .++.+++++++ +.++|+||+|||+++++++++++.+++++ +++||+++||++
T Consensus 70 ---~~~------------------~~~~~~~~~~~-~~~~D~vilavk~~~~~~~l~~l~~~l~~---~~~iv~~~nGi~ 124 (318)
T 3hwr_A 70 ---DEQ------------------VKVSASSDPSA-VQGADLVLFCVKSTDTQSAALAMKPALAK---SALVLSLQNGVE 124 (318)
T ss_dssp ---EEE------------------ECCEEESCGGG-GTTCSEEEECCCGGGHHHHHHHHTTTSCT---TCEEEEECSSSS
T ss_pred ---cEE------------------EeeeeeCCHHH-cCCCCEEEEEcccccHHHHHHHHHHhcCC---CCEEEEeCCCCC
Confidence 111 14667788765 68999999999999999999999999887 789999999998
Q ss_pred ccccccccCCCHHHHHHhHhCCC-----CccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCC
Q 012349 202 AELEAVPRIITPTQMINRATGVP-----IENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD 276 (465)
Q Consensus 202 ~~~~~~~~~~~~se~I~e~lg~~-----~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~D 276 (465)
.. +.+.+.++.+ ....++++||+++.+++.|.++ ++. .+.++.++++|++.+|++++++|
T Consensus 125 ~~-----------~~l~~~~~~~vl~g~~~~~a~~~gP~~~~~~~~g~~~---ig~-~~~~~~l~~~l~~~~~~~~~~~D 189 (318)
T 3hwr_A 125 NA-----------DTLRSLLEQEVAAAVVYVATEMAGPGHVRHHGRGELV---IEP-TSHGANLAAIFAAAGVPVETSDN 189 (318)
T ss_dssp HH-----------HHHHHHCCSEEEEEEEEEEEEEEETTEEEEEEEEEEE---ECC-CTTTHHHHHHHHHTTCCEEECSC
T ss_pred cH-----------HHHHHHcCCcEEEEEEEEeEEEcCCeEEEEcCCceEE---EcC-CHHHHHHHHHHHhCCCCcEechH
Confidence 75 4566666411 1123678999999999887543 333 45678899999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcccCCC---cchHHHHHHHHHHHHHHHHHHhCCCcchhccCchhhhhhc-c-cCchhH
Q 012349 277 LVTHEVMGGLKNVYAIGAGMVAALTNES---ATSKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVT-L-LKGRNA 351 (465)
Q Consensus 277 i~gve~~galKNviAia~Gi~~gl~~g~---~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~glgDl~~T-~-~~sRN~ 351 (465)
+.+.+|+|+++|+..++.+++.+..+|. +.....+++++++|+..++++.|.+.... +-|.+.. + ..+.|+
T Consensus 190 i~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~~~~~~~l~~~~~~E~~~va~a~G~~l~~~----~~~~~~~~~~~~~~~~ 265 (318)
T 3hwr_A 190 VRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVMRDVMEECFAVARAEGVKLPDD----VALAIRRIAETMPRQS 265 (318)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSTTHHHHHHHHHHHHHHHHHHTTCCCCTT----HHHHHHHHHHHSTTCC
T ss_pred HHHHHHHHHHHHhhhhHHHHHHCCCHHHHhcChhHHHHHHHHHHHHHHHHHHcCCCCChH----HHHHHHHHHHhcCCCC
Confidence 9999999999999999999998887652 11234799999999999999999864321 1111111 1 011121
Q ss_pred -HHHHHHhcCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012349 352 -WYGQELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 423 (465)
Q Consensus 352 -~~G~~l~~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~~ 423 (465)
++-+++.+|+.+ .+|-+.. .++++++++|+ + +|+++++|+++..
T Consensus 266 sSM~qD~~~gr~t-----------Eid~i~G--~vv~~a~~~gv--------------~-tP~~~~l~~ll~~ 310 (318)
T 3hwr_A 266 SSTAQDLARGKRS-----------EIDHLNG--LIVRRGDALGI--------------P-VPANRVLHALVRL 310 (318)
T ss_dssp CHHHHHHHTTCCC-----------SGGGTHH--HHHHHHHHTTC--------------C-CHHHHHHHHHHHH
T ss_pred cHHHHHHHcCChh-----------HHHHHHH--HHHHHHHHhCC--------------C-CcHHHHHHHHHHH
Confidence 233444444322 3444444 79999999995 6 8999999999974
No 9
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.98 E-value=1.6e-31 Score=268.11 Aligned_cols=285 Identities=18% Similarity=0.133 Sum_probs=208.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
+|||+|||+|+||+++|..|+++ | ++|++|+|++ .+.+ ++.+ ..+.+. .+
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~-g-----~~V~~~~r~~--~~~i---------~~~g----------~~~~~~---~g 51 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRS-G-----EDVHFLLRRD--YEAI---------AGNG----------LKVFSI---NG 51 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHT-S-----CCEEEECSTT--HHHH---------HHTC----------EEEEET---TC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-C-----CeEEEEEcCc--HHHH---------HhCC----------CEEEcC---CC
Confidence 37999999999999999999998 7 8999999986 2432 2211 011110 01
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~ 202 (465)
+..+ .++.++++.++ +.++|+||+|||+++++++++++++++.+ +++||+++||++.
T Consensus 52 ~~~~-------------------~~~~~~~~~~~-~~~~D~vilavk~~~~~~~l~~l~~~l~~---~~~iv~l~nGi~~ 108 (312)
T 3hn2_A 52 DFTL-------------------PHVKGYRAPEE-IGPMDLVLVGLKTFANSRYEELIRPLVEE---GTQILTLQNGLGN 108 (312)
T ss_dssp CEEE-------------------SCCCEESCHHH-HCCCSEEEECCCGGGGGGHHHHHGGGCCT---TCEEEECCSSSSH
T ss_pred eEEE-------------------eeceeecCHHH-cCCCCEEEEecCCCCcHHHHHHHHhhcCC---CCEEEEecCCCCc
Confidence 1111 13556778765 68999999999999999999999999987 7899999999986
Q ss_pred cccccccCCCHHHHHHhHhCCCC------ccEEEEeCCchhhhhhccCceEEEEe-CChhHHHHHHHHHcCCCCeEEecC
Q 012349 203 ELEAVPRIITPTQMINRATGVPI------ENILYLGGPNIASEIYNKEYANARIC-GAEKWRKPLAKFLRRPHFTVWDNG 275 (465)
Q Consensus 203 ~~~~~~~~~~~se~I~e~lg~~~------~~i~vlsGP~~a~ev~~g~~t~~~~~-~~~~~~~~l~~ll~~~g~~v~~s~ 275 (465)
. +.+++.++... ...+.+.||+++.+.+.+...+.... .+++.++.++++|++.+|+++.++
T Consensus 109 ~-----------~~l~~~~~~~~v~~~~~~~~a~~~~p~~v~~~~~g~~~ig~~~~~~~~~~~~l~~~l~~~g~~~~~~~ 177 (312)
T 3hn2_A 109 E-----------EALATLFGAERIIGGVAFLCSNRGEPGEVHHLGAGRIILGEFLPRDTGRIEELAAMFRQAGVDCRTTD 177 (312)
T ss_dssp H-----------HHHHHHTCGGGEEEEEEEEECCBCSSSEEEECEEEEEEEEESSCCCSHHHHHHHHHHHHTTCCEEECS
T ss_pred H-----------HHHHHHCCCCcEEEEEEEeeeEEcCCcEEEECCCCeEEEecCCCCccHHHHHHHHHHHhCCCCcEECh
Confidence 5 56777776321 01235678999988765543222221 245678999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhcccCCC---cchHHHHHHHHHHHHHHHHHHhC--CCcchhccCchhhhhhccc--Cc
Q 012349 276 DLVTHEVMGGLKNVYAIGAGMVAALTNES---ATSKSVYFAHCTSEMVFITHLLA--EEPEKLAGPLLADTYVTLL--KG 348 (465)
Q Consensus 276 Di~gve~~galKNviAia~Gi~~gl~~g~---~n~~a~li~~~~~E~~~l~~a~G--~~~~t~~g~glgDl~~T~~--~s 348 (465)
|+.+++|.|+++|+..++.+++.+..+|. ++..+.++++++.|+.++++++| .+... .+.|.+.++. .+
T Consensus 178 di~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~~~~~~l~~~~~~E~~~va~a~G~~~~~~~----~~~~~~~~~~~~~~ 253 (312)
T 3hn2_A 178 DLKRARWEKLVWNIPFNGLCALLQQPVNLILARDVSRKLVRGIMLEVIAGANAQGLATFIAD----GYVDDMLEFTDAMG 253 (312)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSHHHHHHHHHHHHHHHHHHHTSCCSSCCCT----THHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhChhHHHHHHHHHHHHHHHHHHcCCccCCCH----HHHHHHHHHHhcCC
Confidence 99999999999999988888888877652 34456899999999999999999 75431 3456555552 34
Q ss_pred hhH-HHHHHHhcCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012349 349 RNA-WYGQELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 423 (465)
Q Consensus 349 RN~-~~G~~l~~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~~ 423 (465)
+|+ ++-+++.+|+ ..|.-.....++++++++|+ + +|+++++|++++.
T Consensus 254 ~~~sSM~qD~~~gr-------------~tEid~i~G~vv~~a~~~gv--------------~-~P~~~~l~~ll~~ 301 (312)
T 3hn2_A 254 EYKPSMEIDREEGR-------------PLEIAAIFRTPLAYGAREGI--------------A-MPRVEMLATLLEQ 301 (312)
T ss_dssp SCCCHHHHHHHTTC-------------CCCHHHHTHHHHHHHHHTTC--------------C-CHHHHHHHHHHHH
T ss_pred CCCchHHHHHHhCC-------------CccHHHHhhHHHHHHHHhCC--------------C-CCHHHHHHHHHHH
Confidence 454 3444444443 34444455589999999995 7 8999999999975
No 10
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.97 E-value=2.8e-30 Score=259.93 Aligned_cols=281 Identities=16% Similarity=0.193 Sum_probs=200.5
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
+|||+|||+|+||+++|..|+++ | ++|++|+|++ .+.++.+++ . .+..+.+
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~-g-----~~V~~~~r~~--~~~i~~~Gl-------~-------~~~~~~g------- 52 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKT-G-----HCVSVVSRSD--YETVKAKGI-------R-------IRSATLG------- 52 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHT-T-----CEEEEECSTT--HHHHHHHCE-------E-------EEETTTC-------
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-C-----CeEEEEeCCh--HHHHHhCCc-------E-------EeecCCC-------
Confidence 38999999999999999999998 7 8999999986 243322111 0 0111111
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~ 202 (465)
+..+ .++.++++++++.+++|+||+|||+++++++++++++++++ +++||+++||++.
T Consensus 53 ~~~~-------------------~~~~~~~~~~~~~~~~DlVilavK~~~~~~~l~~l~~~l~~---~t~Iv~~~nGi~~ 110 (320)
T 3i83_A 53 DYTF-------------------RPAAVVRSAAELETKPDCTLLCIKVVEGADRVGLLRDAVAP---DTGIVLISNGIDI 110 (320)
T ss_dssp CEEE-------------------CCSCEESCGGGCSSCCSEEEECCCCCTTCCHHHHHTTSCCT---TCEEEEECSSSSC
T ss_pred cEEE-------------------eeeeeECCHHHcCCCCCEEEEecCCCChHHHHHHHHhhcCC---CCEEEEeCCCCCh
Confidence 1111 13556788877656899999999999999999999999887 7899999999987
Q ss_pred cccccccCCCHHHHHHhHhCCCCccEEEEeCCchh-------hhhhccCceEEEEe----CChhHHHHHHHHHcCCCCeE
Q 012349 203 ELEAVPRIITPTQMINRATGVPIENILYLGGPNIA-------SEIYNKEYANARIC----GAEKWRKPLAKFLRRPHFTV 271 (465)
Q Consensus 203 ~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a-------~ev~~g~~t~~~~~----~~~~~~~~l~~ll~~~g~~v 271 (465)
. +.+++.++.. + +++||++. .++....+..+.++ .+++.++.++++|++.+|++
T Consensus 111 ~-----------~~l~~~~~~~--~--vl~g~~~~~a~~~~pg~v~~~~~~~~~ig~~~~~~~~~~~~l~~~l~~~~~~~ 175 (320)
T 3i83_A 111 E-----------PEVAAAFPDN--E--VISGLAFIGVTRTAPGEIWHQAYGRLMLGNYPGGVSERVKTLAAAFEEAGIDG 175 (320)
T ss_dssp S-----------HHHHHHSTTS--C--EEEEEEEEEEEEEETTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHHHTTSCE
T ss_pred H-----------HHHHHHCCCC--c--EEEEEEEeceEEcCCCEEEECCCCEEEEecCCCCccHHHHHHHHHHHhCCCCc
Confidence 6 5788888642 2 45666655 33333333334443 24567899999999999999
Q ss_pred EecCChHHHHHHHHHHHH----HHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccCchhhhhhccc-
Q 012349 272 WDNGDLVTHEVMGGLKNV----YAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVTLL- 346 (465)
Q Consensus 272 ~~s~Di~gve~~galKNv----iAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~glgDl~~T~~- 346 (465)
+.++|+.+++|+|+++|+ +++++|+..|..+. +.. +.++++++.|+..+++++|.+... .+.|.+.++.
T Consensus 176 ~~~~di~~~~w~Kl~~N~~~N~ltal~~~~~g~~~~-~~~-~~l~~~~~~E~~~va~a~G~~l~~----~~~~~~~~~~~ 249 (320)
T 3i83_A 176 IATENITTARWQKCVWNAAFNPLSVLSGGLDTLDIL-STQ-EGFVRAIMQEIRAVAAANGHPLPE----DIVEKNVASTY 249 (320)
T ss_dssp EECSCHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHH-HHC-HHHHHHHHHHHHHHHHHTTCCCCT----THHHHHHHHHH
T ss_pred eECHHHHHHHHHHHHHHHhhhHHHHHHCCCHHHHHh-CcH-HHHHHHHHHHHHHHHHHcCCCCCh----HHHHHHHHHHh
Confidence 999999999999999976 55666665555443 223 689999999999999999997542 3445444441
Q ss_pred -CchhH-HHHHHHhcCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012349 347 -KGRNA-WYGQELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 423 (465)
Q Consensus 347 -~sRN~-~~G~~l~~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~~ 423 (465)
.++|+ ++-+++.+|+ ..|.-.....++++++++|+ + +|+++++|+++..
T Consensus 250 ~~~~~~sSM~qD~~~gr-------------~tEid~i~G~vv~~a~~~gv--------------~-~P~~~~l~~~l~~ 300 (320)
T 3i83_A 250 KMPPYKTSMLVDFEAGQ-------------PMETEVILGNAVRAGRRTRV--------------A-IPHLESVYALMKL 300 (320)
T ss_dssp HSCCCCCHHHHHHHHTC-------------CCCHHHHTHHHHHHHHHTTC--------------C-CHHHHHHHHHHHH
T ss_pred cCCCCCCcHHHHHHhCC-------------CchHHHHccHHHHHHHHhCC--------------C-CCHHHHHHHHHHH
Confidence 23333 2333333333 34444455589999999995 7 8999999999974
No 11
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.96 E-value=2.5e-29 Score=254.51 Aligned_cols=295 Identities=14% Similarity=0.087 Sum_probs=205.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
+|||+|||+|+||+++|..|+++ | ++|++|+|+ +.++.++ +.+. +.. .++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~-g-----~~V~~~~r~-~~~~~~~---------~~g~-------~~~-~~~~----- 53 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA-G-----EAINVLARG-ATLQALQ---------TAGL-------RLT-EDGA----- 53 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT-T-----CCEEEECCH-HHHHHHH---------HTCE-------EEE-ETTE-----
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEEECh-HHHHHHH---------HCCC-------EEe-cCCC-----
Confidence 48999999999999999999998 7 899999996 4444422 2110 100 0110
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~ 202 (465)
.++ .++.+++++++ +.++|+||+|||+++++++++++.+++++ +++||+++||++.
T Consensus 54 --~~~------------------~~~~~~~~~~~-~~~~D~Vilavk~~~~~~~~~~l~~~l~~---~~~iv~~~nGi~~ 109 (335)
T 3ghy_A 54 --THT------------------LPVRATHDAAA-LGEQDVVIVAVKAPALESVAAGIAPLIGP---GTCVVVAMNGVPW 109 (335)
T ss_dssp --EEE------------------ECCEEESCHHH-HCCCSEEEECCCHHHHHHHHGGGSSSCCT---TCEEEECCSSSCT
T ss_pred --eEE------------------EeeeEECCHHH-cCCCCEEEEeCCchhHHHHHHHHHhhCCC---CCEEEEECCCCcc
Confidence 010 14667888876 68999999999999999999999999877 7899999999851
Q ss_pred ccc---ccccCCC-----HHHHHHhHhCCCCccE--------EEEeCCchhhhhhccCceEEEE-eCChhHHHHHHHHHc
Q 012349 203 ELE---AVPRIIT-----PTQMINRATGVPIENI--------LYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLR 265 (465)
Q Consensus 203 ~~~---~~~~~~~-----~se~I~e~lg~~~~~i--------~vlsGP~~a~ev~~g~~t~~~~-~~~~~~~~~l~~ll~ 265 (465)
... +..+.++ ..+.+.+.++. .++ +.+.||+++.+...+...+... +.+++.++.++++|+
T Consensus 110 ~~~~~~g~~~~~~~~~~~~~~~l~~~~~~--~~v~~gv~~~~a~~~~pg~v~~~~~g~~~iG~~~~~~~~~~~~l~~~l~ 187 (335)
T 3ghy_A 110 WFFDRPGPLQGQRLQAVDPHGRIAQAIPT--RHVLGCVVHLTCATVSPGHIRHGNGRRLILGEPAGGASPRLASIAALFG 187 (335)
T ss_dssp TTTCSSSTTTTCCCTTTCTTSHHHHHSCG--GGEEEEEECCCEEESSTTEEEECSCCEEEEECTTCSCCHHHHHHHHHHH
T ss_pred ccccccccccccccccCCcHHHHHHhcCc--ccEEEEEEEEEEEEcCCcEEEECCCCeEEEecCCCCcCHHHHHHHHHHH
Confidence 100 0001111 23467777763 222 5688999998877664322211 123567899999999
Q ss_pred CCCCeEEecCChHHHHHHHH----HHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccCchhhh
Q 012349 266 RPHFTVWDNGDLVTHEVMGG----LKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADT 341 (465)
Q Consensus 266 ~~g~~v~~s~Di~gve~~ga----lKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~glgDl 341 (465)
+.+|+++.++|+.+..|.+. .+|++++++|+..|..++ ++..+++++++++|+.++++++|.++... + |.
T Consensus 188 ~~g~~~~~~~di~~~~w~Kl~~na~~N~l~al~~~~~g~~~~-~~~~~~l~~~~~~E~~~va~a~G~~~~~~----~-~~ 261 (335)
T 3ghy_A 188 RAGLQAECSEAIQRDIWFKLWGNMTMNPVSVLTGATCDRILD-DPLVSAFCLAVMAEAKAIGARIGCPIEQS----G-EA 261 (335)
T ss_dssp HTTCEEEECSCHHHHHHHHHHTTTTHHHHHHHHCCCHHHHHH-SHHHHHHHHHHHHHHHHHHHTTTCCCCSC----H-HH
T ss_pred hCCCCcEeCchHHHHHHHHHHHHhhhhHHHHHhCCChHHHhc-ChHHHHHHHHHHHHHHHHHHHcCCCCCcc----H-HH
Confidence 99999999999999988664 489999999999998775 34556899999999999999999976432 1 21
Q ss_pred hhcccCchhHHHHHHHhcCCChhhHhHhhcCCc-ccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHH
Q 012349 342 YVTLLKGRNAWYGQELAKGRLTLDLGDSIKGKG-MIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKI 420 (465)
Q Consensus 342 ~~T~~~sRN~~~G~~l~~g~~~~~~~~~~~~~~-~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~i 420 (465)
..+ +....+..+++ +.+++..++ ..|.-.....++++++++|+ + +|+++++|++
T Consensus 262 ~~~--------~~~~~~~~~sS--M~qD~~~gr~~tEid~i~G~vv~~a~~~gv--------------~-~P~~~~l~~l 316 (335)
T 3ghy_A 262 RSA--------VTRQLGAFKTS--MLQDAEAGRGPLEIDALVASVREIGLHVGV--------------P-TPQIDTLLGL 316 (335)
T ss_dssp HHH--------HHHTTCSCCCT--TTC-----CCCCCHHHHTHHHHHHHHHHTC--------------C-CHHHHHHHHH
T ss_pred HHH--------HHhccCCCCcH--HHHHHHcCCCCchHHHHhhHHHHHHHHhCC--------------C-CCHHHHHHHH
Confidence 111 11112222221 222233334 45555566699999999995 7 8999999999
Q ss_pred Hhc
Q 012349 421 LIM 423 (465)
Q Consensus 421 l~~ 423 (465)
++.
T Consensus 317 i~~ 319 (335)
T 3ghy_A 317 VRL 319 (335)
T ss_dssp HHH
T ss_pred HHH
Confidence 974
No 12
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.96 E-value=3.5e-28 Score=241.80 Aligned_cols=273 Identities=12% Similarity=0.093 Sum_probs=188.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
+|||+|||+|+||+++|..|+++ | ++|++|+|+++.++. ... + +.
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~-g-----~~V~~~~r~~~~~~~----------~~~---------~-----g~----- 46 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQS-L-----PHTTLIGRHAKTITY----------YTV---------P-----HA----- 46 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHH-C-----TTCEEEESSCEEEEE----------ESS---------T-----TS-----
T ss_pred CcEEEEECCCHHHHHHHHHHHHC-C-----CeEEEEEeccCcEEE----------Eec---------C-----Ce-----
Confidence 47999999999999999999999 7 899999999754321 000 0 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHh-cCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV-WDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal-~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
. +..++.+..+++ .++|+||+|||+++++++++++++++++ +++||+++||++
T Consensus 47 ---~--------------------~~~~~~~~~~~~~~~~D~vilavk~~~~~~~l~~l~~~l~~---~~~iv~~~nGi~ 100 (294)
T 3g17_A 47 ---P--------------------AQDIVVKGYEDVTNTFDVIIIAVKTHQLDAVIPHLTYLAHE---DTLIILAQNGYG 100 (294)
T ss_dssp ---C--------------------CEEEEEEEGGGCCSCEEEEEECSCGGGHHHHGGGHHHHEEE---EEEEEECCSSCC
T ss_pred ---e--------------------ccceecCchHhcCCCCCEEEEeCCccCHHHHHHHHHHhhCC---CCEEEEeccCcc
Confidence 0 112223334444 7899999999999999999999999887 689999999998
Q ss_pred ccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCChHHHH
Q 012349 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVTHE 281 (465)
Q Consensus 202 ~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~gve 281 (465)
..+ . .+. .+.++......+.+.||+++. .. +..+.+ .+.+.++.++++|++.+|+++.++|+.+++
T Consensus 101 ~~~-----~-~~~---~~v~~g~~~~~a~~~~pg~v~-~~---~~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~di~~~~ 166 (294)
T 3g17_A 101 QLE-----H-IPF---KNVCQAVVYISGQKKGDVVTH-FR---DYQLRI-QDNALTRQFRDLVQDSQIDIVLEANIQQAI 166 (294)
T ss_dssp CGG-----G-CCC---SCEEECEEEEEEEEETTEEEE-EE---EEEEEE-ECSHHHHHHHHHTTTSSCEEEEESSHHHHH
T ss_pred cHh-----h-CCC---CcEEEEEEEEEEEEcCCCEEE-EC---CCEEec-CccHHHHHHHHHHHhCCCceEEChHHHHHH
Confidence 862 0 000 011110011235788999983 22 222233 345678999999999999999999999999
Q ss_pred HHHHHHHH-HHHHHHhhhcccCC---CcchHHHHHHHHHHHHHHHHHHhCCCcchhccCchhhhhhcc--cCchhH-HHH
Q 012349 282 VMGGLKNV-YAIGAGMVAALTNE---SATSKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVTL--LKGRNA-WYG 354 (465)
Q Consensus 282 ~~galKNv-iAia~Gi~~gl~~g---~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~glgDl~~T~--~~sRN~-~~G 354 (465)
|+|+++|+ ++ .+++ .+..+| .++....+++++++|+.+++++.|.+...- .+.+.+..+ ..+.|+ ++-
T Consensus 167 w~Kl~~N~~in-l~al-~~~~~g~~l~~~~~~~l~~~~~~E~~~va~a~G~~l~~~---~~~~~~~~~~~~~~~~~sSM~ 241 (294)
T 3g17_A 167 WYKLLVNLGIN-SITA-LGRQTVAIMHNPEIRILCRQLLLDGCRVAQAEGLNFSEQ---TVDTIMTIYQGYPDEMGTSMY 241 (294)
T ss_dssp HHHHHHHHHHH-HHHH-HHTSCGGGGGSHHHHHHHHHHHHHHHHHHHHTTCCCCHH---HHHHHHHHHHTSCTTCCCHHH
T ss_pred HHHHHHHHHHH-HHHH-HCCChHHHHcCHHHHHHHHHHHHHHHHHHHHcCCCCCHH---HHHHHHHHHhhcCCCCCCcHH
Confidence 99999999 44 4443 333332 134556899999999999999999875321 122322221 123333 455
Q ss_pred HHHhcCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012349 355 QELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 423 (465)
Q Consensus 355 ~~l~~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~~ 423 (465)
+++.+|+.+ .+|.+.. .++++++++|+ + +|+++++|+++..
T Consensus 242 qD~~~gr~t-----------Eid~i~G--~vv~~a~~~gv--------------~-~P~~~~l~~ll~~ 282 (294)
T 3g17_A 242 YDIVHQQPL-----------EVEAIQG--FIYRRAREHNL--------------D-TPYLDTIYSFLRA 282 (294)
T ss_dssp HHHHTTCCC-----------SGGGTHH--HHHHHHHHTTC--------------C-CHHHHHHHHHHHH
T ss_pred HHHHcCCCc-----------cHHHhhh--HHHHHHHHhCC--------------C-CChHHHHHHHHHH
Confidence 555555432 3555444 79999999995 6 8999999999974
No 13
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.95 E-value=5.6e-27 Score=232.37 Aligned_cols=288 Identities=15% Similarity=0.116 Sum_probs=207.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
||||+|||+|+||+++|..|+++ | ++|++|+|++++++.++.+++ +..+.++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~r~~~~~~~~~~~g~----------------~~~~~~~------ 54 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQG-G-----NDVTLIDQWPAHIEAIRKNGL----------------IADFNGE------ 54 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHHHCE----------------EEEETTE------
T ss_pred CCeEEEECcCHHHHHHHHHHHhC-C-----CcEEEEECCHHHHHHHHhCCE----------------EEEeCCC------
Confidence 58999999999999999999998 7 899999999876665322110 0001100
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecC--HHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTN--LQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d--l~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
.++ .++.++++ ..+++.++|+||+|||++.++++++++.+++++ +++|++++||+
T Consensus 55 --~~~------------------~~~~~~~~~~~~~~~~~~d~vi~~v~~~~~~~v~~~l~~~l~~---~~~iv~~~~g~ 111 (316)
T 2ew2_A 55 --EVV------------------ANLPIFSPEEIDHQNEQVDLIIALTKAQQLDAMFKAIQPMITE---KTYVLCLLNGL 111 (316)
T ss_dssp --EEE------------------ECCCEECGGGCCTTSCCCSEEEECSCHHHHHHHHHHHGGGCCT---TCEEEECCSSS
T ss_pred --eeE------------------ecceeecchhhcccCCCCCEEEEEeccccHHHHHHHHHHhcCC---CCEEEEecCCC
Confidence 000 02333332 112234899999999999999999999998876 68999999998
Q ss_pred cccccccccCCCHHHHHHhHhCCCC------ccEEEEeCCchhhhhhccCceEEEE-eCChhHHHHHHHHHcCCCCeEEe
Q 012349 201 EAELEAVPRIITPTQMINRATGVPI------ENILYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRRPHFTVWD 273 (465)
Q Consensus 201 ~~~~~~~~~~~~~se~I~e~lg~~~------~~i~vlsGP~~a~ev~~g~~t~~~~-~~~~~~~~~l~~ll~~~g~~v~~ 273 (465)
... +.+.+.++... ...+.++||+++.+...|.+..... +.+++..+.++++|+..|++++.
T Consensus 112 ~~~-----------~~l~~~~~~~~vi~g~~~~~~~~~~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~~ll~~~g~~~~~ 180 (316)
T 2ew2_A 112 GHE-----------DVLEKYVPKENILVGITMWTAGLEGPGRVKLLGDGEIELENIDPSGKKFALEVVDVFQKAGLNPSY 180 (316)
T ss_dssp CTH-----------HHHTTTSCGGGEEEEEECCCCEEEETTEEEECSCCCEEEEESSGGGHHHHHHHHHHHHHTTCCEEE
T ss_pred CcH-----------HHHHHHcCCccEEEEEeeeeeEEcCCCEEEEecCCcEEEeecCCCccHHHHHHHHHHHhCCCCcEE
Confidence 753 34555554210 0012478999988877776554332 33567789999999999999999
Q ss_pred cCChHHHHHHHHHHHHHHHHHHhhhcccCCC--cchHH-HHHHHHHHHHHHHHHHhCCCcchhccCchhhhhhccc--C-
Q 012349 274 NGDLVTHEVMGGLKNVYAIGAGMVAALTNES--ATSKS-VYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVTLL--K- 347 (465)
Q Consensus 274 s~Di~gve~~galKNviAia~Gi~~gl~~g~--~n~~a-~li~~~~~E~~~l~~a~G~~~~t~~g~glgDl~~T~~--~- 347 (465)
.+|+.+.+|.|+++|++..+.+.+.|...+. .+..+ .++..++.|+..+++++|.++... .+.|++.+|. .
T Consensus 181 ~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~E~~~la~~~G~~~~~~---~~~~~~~~~~~~~~ 257 (316)
T 2ew2_A 181 SSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISEFAAVAEKEAIYLDQA---EVYTHIVQTYDPNG 257 (316)
T ss_dssp CTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHHHHHHHHHHHHHHTTCCCCHH---HHHHHHHHTTCTTT
T ss_pred chhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCCChH---HHHHHHHHHhcccc
Confidence 9999999999999999888877777764220 12222 788999999999999999976321 4678887764 3
Q ss_pred -chhHH-HHHHH-hcCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012349 348 -GRNAW-YGQEL-AKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 423 (465)
Q Consensus 348 -sRN~~-~G~~l-~~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~~ 423 (465)
+||+. +.+++ .+|+. .|.......++++++++|+ + +|+++++|++++.
T Consensus 258 ~~~~~~sm~~d~~~~g~~-------------~E~~~~~~~~~~~a~~~gv--------------~-~P~~~~~~~~~~~ 308 (316)
T 2ew2_A 258 IGLHYPSMYQDLIKNHRL-------------TEIDYINGAVWRKGQKYNV--------------A-TPFCAMLTQLVHG 308 (316)
T ss_dssp TTTSCCHHHHHHTTTCCC-------------CSGGGTHHHHHHHHHHHTC--------------C-CHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHcCCc-------------chHHHHhhHHHHHHHHhCC--------------C-CCHHHHHHHHHHH
Confidence 67764 66666 55543 3455566789999999995 6 8999999999974
No 14
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.93 E-value=6e-26 Score=225.82 Aligned_cols=291 Identities=13% Similarity=0.077 Sum_probs=195.6
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCC-eeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDK-VLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~-~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
++|||+|||+|+||+++|..|+++ +....+ ++|++|+| +++++.++.+ .+. ......+.
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~-~~~~~g~~~V~~~~r-~~~~~~l~~~--------~g~-------~~~~~~~~--- 66 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALR-AAATDGLLEVSWIAR-GAHLEAIRAA--------GGL-------RVVTPSRD--- 66 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHH-HHHTTSSEEEEEECC-HHHHHHHHHH--------TSE-------EEECSSCE---
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC-ccccCCCCCEEEEEc-HHHHHHHHhc--------CCe-------EEEeCCCC---
Confidence 348999999999999999999876 100102 78999999 6555543220 110 00000000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
.. . .++.++++.+ ++.++|+||+|||++.++++++++.+++++ +++||+++||+
T Consensus 67 ----~~------------~------~~~~~~~~~~-~~~~~D~vil~vk~~~~~~v~~~i~~~l~~---~~~iv~~~nG~ 120 (317)
T 2qyt_A 67 ----FL------------A------RPTCVTDNPA-EVGTVDYILFCTKDYDMERGVAEIRPMIGQ---NTKILPLLNGA 120 (317)
T ss_dssp ----EE------------E------CCSEEESCHH-HHCCEEEEEECCSSSCHHHHHHHHGGGEEE---EEEEEECSCSS
T ss_pred ----eE------------E------ecceEecCcc-ccCCCCEEEEecCcccHHHHHHHHHhhcCC---CCEEEEccCCC
Confidence 00 0 1345667764 478999999999999999999999998876 67899999998
Q ss_pred cccccccccCCCHHHHHHhHhCCCC------ccEEEEeCCchhhhhhccCceEEEEeC-----ChhHHHHHHHHHcCCCC
Q 012349 201 EAELEAVPRIITPTQMINRATGVPI------ENILYLGGPNIASEIYNKEYANARICG-----AEKWRKPLAKFLRRPHF 269 (465)
Q Consensus 201 ~~~~~~~~~~~~~se~I~e~lg~~~------~~i~vlsGP~~a~ev~~g~~t~~~~~~-----~~~~~~~l~~ll~~~g~ 269 (465)
... +.+.+.++... ...+.++||+++.+...+.. .+++. +.+.. .++++|+..++
T Consensus 121 ~~~-----------~~l~~~l~~~~v~~g~~~~~a~~~~pg~~~~~~~g~~--~~ig~~~~~~~~~~~-~~~~ll~~~g~ 186 (317)
T 2qyt_A 121 DIA-----------ERMRTYLPDTVVWKGCVYISARKSAPGLITLEADREL--FYFGSGLPEQTDDEV-RLAELLTAAGI 186 (317)
T ss_dssp SHH-----------HHHTTTSCTTTBCEEEEEEEEEEEETTEEEEEEEEEE--EEEECCSSSCCHHHH-HHHHHHHHTTC
T ss_pred CcH-----------HHHHHHCCCCcEEEEEEEEEEEEcCCCEEEEcCCCce--EEEcCCCCCCcCHHH-HHHHHHHHCCC
Confidence 764 45666665321 11246678888766555532 22322 24556 89999999999
Q ss_pred eEEecCChHHHHHHHHHHHHHHHHHHhhhcccCCCcc-hHHHHHHHHHHHHHHHHHHhCCCcchhccCchhhhhhccc--
Q 012349 270 TVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESAT-SKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVTLL-- 346 (465)
Q Consensus 270 ~v~~s~Di~gve~~galKNviAia~Gi~~gl~~g~~n-~~a~li~~~~~E~~~l~~a~G~~~~t~~g~glgDl~~T~~-- 346 (465)
++++.+|+.+.+|.|+++|++..+.+++.|.++|..- ....++.+++.|+..+++++|.++++. .+.|++.+|.
T Consensus 187 ~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~~~~~~~~~~~~~E~~~v~~a~G~~~~~~---~~~~~~~~~~~~ 263 (317)
T 2qyt_A 187 RAYNPTDIDWYIMKKFMMISVTATATAYFDKPIGSILTEHEPELLSLLEEVAELFRAKYGQVPDD---VVQQLLDKQRKM 263 (317)
T ss_dssp CEECCSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHCHHHHHHHHHHHHHHHHHHTSCCCSS---HHHHHHHHHHHC
T ss_pred CCEEchHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChH---HHHHHHHHHhcc
Confidence 9999999999999999999999998888888764210 123688899999999999999987543 4677777753
Q ss_pred CchhHH-HHHHHhcCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012349 347 KGRNAW-YGQELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 423 (465)
Q Consensus 347 ~sRN~~-~G~~l~~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~~ 423 (465)
.++|+. +.+++.+|+.. |.......++++++++|+ + +|+++.+|++++.
T Consensus 264 ~~~~~~sm~~d~~~g~~~-------------E~~~~~g~~~~~a~~~gv--------------~-~P~~~~~~~~~~~ 313 (317)
T 2qyt_A 264 PPESTSSMHSDFLQGGST-------------EVETLTGYVVREAEALRV--------------D-LPMYKRMYRELVS 313 (317)
T ss_dssp ---------------------------------CTTTHHHHHHHHHTTC--------------C-CHHHHHHHHTTCC
T ss_pred CCCCCChHHHHHHcCCcc-------------CHHHHhhHHHHHHHHcCC--------------C-CCHHHHHHHHHHH
Confidence 566654 54555544432 222335589999999995 7 8999999999874
No 15
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.93 E-value=6.9e-25 Score=219.67 Aligned_cols=282 Identities=15% Similarity=0.071 Sum_probs=189.5
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
+|||+|||+|+||+++|..|+ + | ++|++|+|++++++.++.+++ +.. .++.
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~-g-----~~V~~~~r~~~~~~~l~~~G~----------------~~~-~~~~----- 52 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-L-Y-----HDVTVVTRRQEQAAAIQSEGI----------------RLY-KGGE----- 52 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-T-----SEEEEECSCHHHHHHHHHHCE----------------EEE-ETTE-----
T ss_pred CCEEEEECCCHHHHHHHHHHh-c-C-----CceEEEECCHHHHHHHHhCCc----------------eEe-cCCC-----
Confidence 489999999999999999999 8 7 899999999876665332221 000 0100
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~ 202 (465)
..+ ..+..+. ++..++|+||+|||+++++++++.++++ .+ ++ ||+++||++.
T Consensus 53 --~~~------------------~~~~~~~---~~~~~~D~vilavK~~~~~~~l~~l~~~-~~---~~-ivs~~nGi~~ 104 (307)
T 3ego_A 53 --EFR------------------ADCSADT---SINSDFDLLVVTVKQHQLQSVFSSLERI-GK---TN-ILFLQNGMGH 104 (307)
T ss_dssp --EEE------------------ECCEEES---SCCSCCSEEEECCCGGGHHHHHHHTTSS-CC---CE-EEECCSSSHH
T ss_pred --eec------------------ccccccc---cccCCCCEEEEEeCHHHHHHHHHHhhcC-CC---Ce-EEEecCCccH
Confidence 000 0122222 2457899999999999999999999875 43 56 9999999987
Q ss_pred cccccccCCCHHHHHHhHhCCCC------ccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCC
Q 012349 203 ELEAVPRIITPTQMINRATGVPI------ENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD 276 (465)
Q Consensus 203 ~~~~~~~~~~~se~I~e~lg~~~------~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~D 276 (465)
. +.+++.+|... ...+.+.+|++..+.+.|...+....+..+..+.+.+.|+..++++++++|
T Consensus 105 ~-----------e~l~~~~~~~~vl~g~~~~~a~~~~pg~v~~~~~g~~~iG~~~~~~~~~~~l~~~l~~ag~~~~~~~d 173 (307)
T 3ego_A 105 I-----------HDLKDWHVGHSIYVGIVEHGAVRKSDTAVDHTGLGAIKWSAFDDAEPDRLNILFQHNHSDFPIYYETD 173 (307)
T ss_dssp H-----------HHHHTCCCSCEEEEEEECCEEEECSSSEEEEEECCCEEEEECTTCCGGGGTTTTSSCCTTSCEEECSC
T ss_pred H-----------HHHHHhCCCCcEEEEEEeeceEECCCCEEEEeeeeeEEEEeCCCCcHHHHHHHHHhhhCCCCcEechh
Confidence 5 56777766421 112567789988877766544333333345667788899999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcccCCC---cchHHHHHHHHHHHHHHHHHHhCCCcchhccCchhhhhhcccCchhHHH
Q 012349 277 LVTHEVMGGLKNVYAIGAGMVAALTNES---ATSKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWY 353 (465)
Q Consensus 277 i~gve~~galKNviAia~Gi~~gl~~g~---~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~glgDl~~T~~~sRN~~~ 353 (465)
+.+..|.|++.|+...+.+.+.+..+|. +.....+++..+.|+..++++.+ ++.+ +..+ ..+
T Consensus 174 i~~~~W~Kl~~N~~~N~ltal~~~~~g~l~~~~~~~~l~~~l~~E~~~va~~~~--~~~~----~~~~---------~~~ 238 (307)
T 3ego_A 174 WYRLLTGKLIVNACINPLTALLQVKNGELLTTPAYLAFMKLVFQEACRILKLEN--EEKA----WERV---------QAV 238 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHSHHHHHHHHHHHHHHHHHHTCSC--HHHH----HHHH---------HHH
T ss_pred HHHHHHHHHHHhhhhhHHHHHhcCCcchhhcChhHHHHHHHHHHHHHHHHhccC--hHHH----HHHH---------HHH
Confidence 9999999999999877777777777652 11223789999999999986431 2111 1011 111
Q ss_pred HHHHhcCCChhhHhHhhcCCc-ccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhcCC
Q 012349 354 GQELAKGRLTLDLGDSIKGKG-MIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIMRE 425 (465)
Q Consensus 354 G~~l~~g~~~~~~~~~~~~~~-~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~~~~ 425 (465)
....+..++ +...+..+++. .+|-+.. .++++++++|+ + +|+++++|+++..-+
T Consensus 239 ~~~~~~~~s-SM~qD~~~gr~tEid~i~G--~vv~~a~~~gv--------------~-tP~~~~l~~li~~~e 293 (307)
T 3ego_A 239 CGQTKENRS-SMLVDVIGGRQTEADAIIG--YLLKEASLQGL--------------D-AVHLEFLYGSIKALE 293 (307)
T ss_dssp HHHTTTCCC-HHHHHHHHTCCCSHHHHHH--HHHHHHHHTTC--------------C-CHHHHHHHHHHHHTC
T ss_pred HHhcCCCCc-hHHHHHHcCCcccHHHhhh--HHHHHHHHcCC--------------C-CcHHHHHHHHHHHHH
Confidence 111122222 11111112222 3455444 89999999995 6 899999999997543
No 16
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.93 E-value=1.9e-24 Score=212.00 Aligned_cols=280 Identities=11% Similarity=0.093 Sum_probs=194.7
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhcC
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (465)
|||+|||+|+||+++|..|+++ | ++|++|+|+++.++.++ ..+ ..+ .
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~r~~~~~~~l~---------~~~------------~~~------~ 47 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ-G-----HEVQGWLRVPQPYCSVN---------LVE------------TDG------S 47 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCSEEEEE---------EEC------------TTS------C
T ss_pred CeEEEECcCHHHHHHHHHHHhC-C-----CCEEEEEcCccceeeEE---------EEc------------CCC------c
Confidence 6999999999999999999998 7 89999999986544311 100 000 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccccc
Q 012349 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (465)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~~ 203 (465)
.++ ..+. .++. +++.++|+||+|||++.++++++++.+++++ +++|++++||+...
T Consensus 48 -~~~------------------~~~~-~~~~-~~~~~~d~vi~~v~~~~~~~v~~~l~~~l~~---~~~vv~~~~g~~~~ 103 (291)
T 1ks9_A 48 -IFN------------------ESLT-ANDP-DFLATSDLLLVTLKAWQVSDAVKSLASTLPV---TTPILLIHNGMGTI 103 (291)
T ss_dssp -EEE------------------EEEE-ESCH-HHHHTCSEEEECSCGGGHHHHHHHHHTTSCT---TSCEEEECSSSCTT
T ss_pred -eee------------------eeee-ecCc-cccCCCCEEEEEecHHhHHHHHHHHHhhCCC---CCEEEEecCCCCcH
Confidence 000 0122 2444 5678999999999999999999999998876 68899999999653
Q ss_pred ccccccCCCHHHHHHhHhCC--C--CccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCChHH
Q 012349 204 LEAVPRIITPTQMINRATGV--P--IENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVT 279 (465)
Q Consensus 204 ~~~~~~~~~~se~I~e~lg~--~--~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~g 279 (465)
+.+.+.++. . ....+.+.|| .+.+...|.......+.+++..+.++++|+..++++++.+|+.+
T Consensus 104 -----------~~l~~~~~~~~~g~~~~~~~~~~p-~~~~~~~g~~~i~~~~~~~~~~~~~~~ll~~~g~~~~~~~~~~~ 171 (291)
T 1ks9_A 104 -----------EELQNIQQPLLMGTTTHAARRDGN-VIIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRA 171 (291)
T ss_dssp -----------GGGTTCCSCEEEEEECCEEEEETT-EEEEEECCCEEEEESSGGGTTCTHHHHHHHTTSSCEEECTTHHH
T ss_pred -----------HHHHHhcCCeEEEEEeEccEEcCC-EEEEecccceEEccCCCCcchHHHHHHHHHhcCCCCeecHHHHH
Confidence 223343331 0 0113468899 67677777533222233455678899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcc--hhccCchhhhhhcccCchhHHHHHHH
Q 012349 280 HEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPE--KLAGPLLADTYVTLLKGRNAWYGQEL 357 (465)
Q Consensus 280 ve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~--t~~g~glgDl~~T~~~sRN~~~G~~l 357 (465)
..|.+.+.|..-.+...+.+..+|.-.....++..++.|+..+++++|.++. .+. ..+.|++.+|...+.+.+ +++
T Consensus 172 ~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~~-~~~~~~~~~~~~~~ssm~-~d~ 249 (291)
T 1ks9_A 172 ELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLR-DYVMQVIDATAENISSML-QDI 249 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHHHHHHHTCCCCHHHHH-HHHHHHHHHTTTCCCHHH-HHH
T ss_pred HHHHHHeeeeeecHHHHHHCCCchHHHhHHHHHHHHHHHHHHHHHHcCCCCCHHHHH-HHHHHHHhcCCCCCChHH-HHH
Confidence 9999998887665555555544331111236889999999999999999752 221 146777776642233333 667
Q ss_pred hcCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012349 358 AKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 422 (465)
Q Consensus 358 ~~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~ 422 (465)
.+|+.. |+ ..+.| .++++++++|+ + +|+++++|+++.
T Consensus 250 ~~g~~~-e~-------~~~~g-----~~~~~a~~~gv--------------~-~P~~~~~~~~~~ 286 (291)
T 1ks9_A 250 RALRHT-EI-------DYING-----FLLRRARAHGI--------------A-VPENTRLFEMVK 286 (291)
T ss_dssp HTTCCC-SG-------GGTHH-----HHHHHHHHHTC--------------C-CHHHHHHHHHHH
T ss_pred HcCCcc-HH-------HHHHH-----HHHHHHHHhCC--------------C-CCHHHHHHHHHH
Confidence 777654 21 13455 59999999995 7 899999999986
No 17
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.92 E-value=6.5e-25 Score=227.07 Aligned_cols=297 Identities=11% Similarity=0.137 Sum_probs=191.5
Q ss_pred CceEEEECccHHHHHHHHHHHH-hcCCCCCCeeEEEEe---cCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQD-SYGYLRDKVLIRIWR---RPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~-~~G~~~~~~~V~l~~---r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~ 118 (465)
+|||+|||+|+||+++|..|++ + | ++|++|+ |+++.++. .+++.+. .-+..+.++..
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~-G-----~~V~~~~~~~r~~~~~~~--------~~~~~g~-----~~~~~~~~~~~ 62 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRD-G-----VEVRVLTLFADEAERWTK--------ALGADEL-----TVIVNEKDGTQ 62 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTST-T-----EEEEEECCSTTHHHHHHH--------HHTTSCE-----EEEEECSSSCE
T ss_pred CceEEEECCCHHHHHHHHHHHhCC-C-----CEEEEEeCCCCcHHHHHH--------HHhhccc-----eeeeecCCCcc
Confidence 4899999999999999999987 6 6 9999999 66554443 1222110 00000111100
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeE-EecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEe-
Q 012349 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLK-VVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISL- 196 (465)
Q Consensus 119 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~-~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~- 196 (465)
..++ ..+. +++|+++++.++|+||+|||++.++++++++.+++++ +++|+++
T Consensus 63 -----~~~~------------------~~~~~~~~~~~~a~~~aD~Vilav~~~~~~~v~~~l~~~l~~---~~ivv~~~ 116 (404)
T 3c7a_A 63 -----TEVK------------------SRPKVITKDPEIAISGADVVILTVPAFAHEGYFQAMAPYVQD---SALIVGLP 116 (404)
T ss_dssp -----EEEE------------------ECCSEEESCHHHHHTTCSEEEECSCGGGHHHHHHHHTTTCCT---TCEEEETT
T ss_pred -----ceee------------------ccceEEeCCHHHHhCCCCEEEEeCchHHHHHHHHHHHhhCCC---CcEEEEcC
Confidence 0000 0233 6788988889999999999999999999999999876 6888884
Q ss_pred -eccccccccccccCCCHHHHHHhH-----h-CCCCcc-EEEEeCCchhhhhhccCc--eEEEE-e--C-ChhHHHHHHH
Q 012349 197 -AKGVEAELEAVPRIITPTQMINRA-----T-GVPIEN-ILYLGGPNIASEIYNKEY--ANARI-C--G-AEKWRKPLAK 262 (465)
Q Consensus 197 -~kGi~~~~~~~~~~~~~se~I~e~-----l-g~~~~~-i~vlsGP~~a~ev~~g~~--t~~~~-~--~-~~~~~~~l~~ 262 (465)
++|++... .+.+.+. + +....+ .+.+.||+++.++..+.. ..... + . .+..++.+++
T Consensus 117 ~~~G~~~~~---------~~~l~~~~~~~v~~~~~~~~~~~~~~gpg~~v~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~ 187 (404)
T 3c7a_A 117 SQAGFEFQC---------RDILGDKAAAVSMMSFETLPWACRIKEFGRKVEVLGTKSVLAASLIKGTAKTVDPLSTLQML 187 (404)
T ss_dssp CCTTHHHHH---------HHHHGGGGGTSEEEEESSCSEEEEEEETTTEEEEEEECSEEEEEEECCSSCCSCHHHHHHHH
T ss_pred CCccHHHHH---------HHHHHhcCCCeEEEEecCchHhhcccCCCcEEEEEEECceEEEEEccCCcchHHHHHHHHHH
Confidence 56644320 1233322 1 100122 367799998776654431 11222 2 1 2234455555
Q ss_pred HHcCCCCeEEecCChHHHHHHHHHHHHHHHHHHhhhcc------c------CCC--cchHHHHHHHHHHHHHHHHHHh--
Q 012349 263 FLRRPHFTVWDNGDLVTHEVMGGLKNVYAIGAGMVAAL------T------NES--ATSKSVYFAHCTSEMVFITHLL-- 326 (465)
Q Consensus 263 ll~~~g~~v~~s~Di~gve~~galKNviAia~Gi~~gl------~------~g~--~n~~a~li~~~~~E~~~l~~a~-- 326 (465)
++.+++ +..++|+++++|++ |+++++.+++.+. . +++ ....+.+++++++|+.++++++
T Consensus 188 ~~~~~~--~~~~~di~~~~l~~---N~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~E~~~va~a~~~ 262 (404)
T 3c7a_A 188 HGAEPV--FRLAKHFLEMLIMS---YSFVHPAILFGRWGSWDGKPVPEAPLFYQGIDQATADMLTACSNECKDVANAIMA 262 (404)
T ss_dssp HCSSSE--EEECSCHHHHHHTT---CTTHHHHHHHHHHTTCCSCCBSSCCBSGGGCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCCc--eeEcCCEeeeeecC---CceeccHHHHHHHHhhhcCCCCCCCccccCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 554332 55799999999985 7777766666322 1 222 1245689999999999999999
Q ss_pred ---CCCcchhccCchhhhhhcccCchhHHHHHHHhcCCChhhHhHh---------------------hcCCcccchHH-H
Q 012349 327 ---AEEPEKLAGPLLADTYVTLLKGRNAWYGQELAKGRLTLDLGDS---------------------IKGKGMIQGIS-A 381 (465)
Q Consensus 327 ---G~~~~t~~g~glgDl~~T~~~sRN~~~G~~l~~g~~~~~~~~~---------------------~~~~~~vEG~~-t 381 (465)
|.++.++ .+++|++.+|+.. .++++.+..++.+. ++.+...||+. +
T Consensus 263 ~~~G~~~~~~--~~~~d~~~~~~~~-------~~~~~~s~~~~~~~~~~~~d~~~P~~~te~~~~~d~~~r~~~Edv~~~ 333 (404)
T 3c7a_A 263 ACPGNDLSDV--KDIYQWYLEYYHE-------DIQDDHDLYHAITTNKSYKGLVHPVKAVDGGVAPDFGNRYLTEDIPMG 333 (404)
T ss_dssp HSTTCCCTTC--CCHHHHHHHHSTT-------TBSCCSSHHHHHHTBGGGTTCBCCEEEETTEEEECCCSSTTTTTTTTT
T ss_pred hcCCCCcccC--CCHHHHHHHhCCC-------ccCChhhHHHHHHhhhhhccCCCCCCCcCCCccCCccccccccccccc
Confidence 9987665 3588999888422 12222222221111 12344789886 8
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012349 382 VKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 422 (465)
Q Consensus 382 ~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~ 422 (465)
+..++++++++|+ + +|++++||++++
T Consensus 334 ~~~v~~la~~~gV--------------~-tP~~~~l~~l~~ 359 (404)
T 3c7a_A 334 MIVFKGVAIAAGV--------------A-IPSNDKLIMWAQ 359 (404)
T ss_dssp HHHHHHHHHHHTC--------------C-CHHHHHHHHHHH
T ss_pred hHHHHHHHHHhCC--------------C-CchHHHHHHHHH
Confidence 8999999999995 7 899999999986
No 18
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.89 E-value=2.1e-22 Score=213.50 Aligned_cols=278 Identities=13% Similarity=0.074 Sum_probs=195.4
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
+.|||+|||+|+||+.+|..|+++ | ++|++|++++++++.++ +++ ++.|.+++.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~-G-----~~V~~~d~~~~~v~~l~---------~~~--------~~i~e~gl~--- 60 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI-G-----HDVFCLDVDQAKIDILN---------NGG--------VPIHEPGLK--- 60 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHH---------TTC--------CSSCCTTHH---
T ss_pred CCceEEEECcCHHHHHHHHHHHhC-C-----CEEEEEECCHHHHHHHH---------CCC--------CCcCCCCHH---
Confidence 458999999999999999999999 8 99999999998777633 321 344555431
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc----------chHHHHHHHHHHhhhccCCCC
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS----------TETKEVFEEISRYWKERITVP 191 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps----------~~l~~vl~~l~~~l~~~~~~~ 191 (465)
|++.+... ..++.+++|+++++.+||+||+|||+ +++++++++|.+++++ ++
T Consensus 61 --------~~l~~~~~-------~~~l~~ttd~~~a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~---~~ 122 (478)
T 2y0c_A 61 --------EVIARNRS-------AGRLRFSTDIEAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTG---FK 122 (478)
T ss_dssp --------HHHHHHHH-------TTCEEEECCHHHHHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCS---CE
T ss_pred --------HHHHHhcc-------cCCEEEECCHHHHhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCC---CC
Confidence 11111000 01578999998889999999999998 8999999999999886 67
Q ss_pred EEEEeeccccccccccccCCCHHHHHHhHhCCCC--ccEEEEeCCchhhhhhc----cCceEEEEeCC-h----hHHHHH
Q 012349 192 VIISLAKGVEAELEAVPRIITPTQMINRATGVPI--ENILYLGGPNIASEIYN----KEYANARICGA-E----KWRKPL 260 (465)
Q Consensus 192 ivIs~~kGi~~~~~~~~~~~~~se~I~e~lg~~~--~~i~vlsGP~~a~ev~~----g~~t~~~~~~~-~----~~~~~l 260 (465)
+||..+ |+++. +...+++.+.+.++... ..+.+.++|.++.+... +.+..++++.+ + +..+.+
T Consensus 123 iVV~~S-Tv~~g-----t~~~l~~~l~~~~~~g~~~~~~~v~~~Pe~~~eG~~~~~~~~p~~iviG~~~~~~~~~~~~~~ 196 (478)
T 2y0c_A 123 VIVDKS-TVPVG-----TAERVRAAVAEELAKRGGDQMFSVVSNPEFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELM 196 (478)
T ss_dssp EEEECS-CCCTT-----HHHHHHHHHHHHHHHTTCCCCEEEEECCCCCCTTCHHHHHHSCSCEEEECCSSHHHHHHHHHH
T ss_pred EEEEeC-CcCCC-----chHHHHHHHHHHhcCCCCCccEEEEEChhhhcccceeeccCCCCEEEEEECCCcccHHHHHHH
Confidence 776665 87665 23345566665432111 24678999999988664 44555566554 4 567889
Q ss_pred HHHHcCCCC---eEEecCChHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccCc
Q 012349 261 AKFLRRPHF---TVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGPL 337 (465)
Q Consensus 261 ~~ll~~~g~---~v~~s~Di~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~g 337 (465)
+++|+. .+ .++...|+.+.||.|.+-|. . .++...+++|+..+++++|++++++.. +
T Consensus 197 ~~l~~~-~~~~~~~~~~~di~~ae~~Kl~~N~-----------------~-~a~~ia~~nE~~~la~~~Gid~~~v~~-~ 256 (478)
T 2y0c_A 197 KKLYAP-FNRNHERTLYMDVRSAEFTKYAANA-----------------M-LATRISFMNELANLADRFGADIEAVRR-G 256 (478)
T ss_dssp HHHTGG-GGSSSCCEEEECHHHHHHHHHHHHH-----------------H-HHHHHHHHHHHHHHHHHTTCCHHHHHH-H
T ss_pred HHHHHH-HhccCCeEEcCCHHHHHHHHHHHHH-----------------H-HHHHHHHHHHHHHHHHHhCCCHHHHHH-H
Confidence 999985 55 38889999999999888875 1 245678899999999999999877643 2
Q ss_pred hhhhhhcc--cCchhHHHHHHHhcCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHH
Q 012349 338 LADTYVTL--LKGRNAWYGQELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILK 415 (465)
Q Consensus 338 lgDl~~T~--~~sRN~~~G~~l~~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~ 415 (465)
++ +- ...++++.|..++.+.. ....+.+.++++++|+ + +|+++
T Consensus 257 i~----~~~rig~~~~~pG~g~gg~c~----------------~kD~~~l~~~A~~~gv--------------~-~pl~~ 301 (478)
T 2y0c_A 257 IG----SDPRIGYHFLYAGCGYGGSCF----------------PKDVEALIRTADEHGQ--------------S-LQILK 301 (478)
T ss_dssp HH----TSTTTCSTTCCCSSCCCSSSH----------------HHHHHHHHHHHHHTTC--------------C-CHHHH
T ss_pred Hh----cCCccCcccCCCCcccccCcC----------------HHHHHHHHHHHHHcCC--------------C-cHHHH
Confidence 22 10 01123333322211111 1235678999999994 6 89999
Q ss_pred HHHHHHhcC
Q 012349 416 MLYKILIMR 424 (465)
Q Consensus 416 ~vy~il~~~ 424 (465)
+++++....
T Consensus 302 ~v~~in~~~ 310 (478)
T 2y0c_A 302 AVSSVNATQ 310 (478)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999854
No 19
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.86 E-value=1.3e-20 Score=197.87 Aligned_cols=222 Identities=16% Similarity=0.113 Sum_probs=169.0
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhcC
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (465)
.+|+|||+|+||+++|..|+++ | |+|++|++++++++.+ +++ +++.|+|++.
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~-G-----~~V~~~D~~~~kv~~l---------~~g--------~~~~~epgl~----- 60 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDF-G-----HEVVCVDKDARKIELL---------HQN--------VMPIYEPGLD----- 60 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCSTTHHHH---------TTT--------CCSSCCTTHH-----
T ss_pred eEEEEEcCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHH---------hcC--------CCCccCCCHH-----
Confidence 5899999999999999999999 8 9999999999887763 332 3677777653
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-----------hHHHHHHHHHHhhhccCCCCE
Q 012349 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-----------ETKEVFEEISRYWKERITVPV 192 (465)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-----------~l~~vl~~l~~~l~~~~~~~i 192 (465)
|++.+... ..++.+|+|+++++++||+||+|||.. +++++++.+.+++++ +++
T Consensus 61 ------~~~~~~~~-------~g~l~~ttd~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~---g~i 124 (446)
T 4a7p_A 61 ------ALVASNVK-------AGRLSFTTDLAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTK---PSV 124 (446)
T ss_dssp ------HHHHHHHH-------TTCEEEESCHHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCS---CCE
T ss_pred ------HHHHhhcc-------cCCEEEECCHHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCC---CCE
Confidence 22211000 025789999999999999999998754 599999999999886 677
Q ss_pred EEEeeccccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhc----cCceEEEEeCC-hhHHHHHHHHHcCC
Q 012349 193 IISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYN----KEYANARICGA-EKWRKPLAKFLRRP 267 (465)
Q Consensus 193 vIs~~kGi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~----g~~t~~~~~~~-~~~~~~l~~ll~~~ 267 (465)
||..+ ++++. +.+.+++.+.+..+. ..+.+++||+++.+... +.++.++++++ ++..+.++.+|+..
T Consensus 125 VV~~S-Tv~pg-----tt~~l~~~l~e~~~~--~d~~v~~~Pe~a~eG~a~~d~~~p~~ivvG~~~~~~~~~~~~ly~~~ 196 (446)
T 4a7p_A 125 IVTKS-TVPVG-----TGDEVERIIAEVAPN--SGAKVVSNPEFLREGAAIEDFKRPDRVVVGTEDEFARQVMREIYRPL 196 (446)
T ss_dssp EEECS-CCCTT-----HHHHHHHHHHHHSTT--SCCEEEECCCCCCTTSHHHHHHSCSCEEEECSCHHHHHHHHHHHCSC
T ss_pred EEEeC-CCCch-----HHHHHHHHHHHhCCC--CCceEEeCcccccccchhhhccCCCEEEEeCCcHHHHHHHHHHHHHH
Confidence 77766 78776 345566777665432 35789999999998764 55666677664 67788999999864
Q ss_pred CCe---EEecCChHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhcc
Q 012349 268 HFT---VWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAG 335 (465)
Q Consensus 268 g~~---v~~s~Di~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g 335 (465)
.-. ++...|+.+.|++|...|. ..++...+++|+..+|+++|++++++.+
T Consensus 197 ~~~~~~~~~~~d~~~aE~~Kl~~N~------------------~~a~~ia~~nE~~~l~~~~GiD~~~v~~ 249 (446)
T 4a7p_A 197 SLNQSAPVLFTGRRTSELIKYAANA------------------FLAVKITFINEIADLCEQVGADVQEVSR 249 (446)
T ss_dssp C-----CEEEECHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred hcCCCeEEEeCCHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 322 4788899999998766663 2345678899999999999999988754
No 20
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.84 E-value=4.3e-20 Score=194.43 Aligned_cols=224 Identities=14% Similarity=0.103 Sum_probs=165.2
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhcC
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (465)
|||+|||+|+||+++|..|+++ | ++|++|++++++++.+ +++ .++.|.+++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-G-----~~V~~~D~~~~~v~~l---------~~g--------~~~i~e~gl~----- 54 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-G-----ANVRCIDTDRNKIEQL---------NSG--------TIPIYEPGLE----- 54 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHH---------HHT--------CSCCCSTTHH-----
T ss_pred CEEEEECcCHHHHHHHHHHHhc-C-----CEEEEEECCHHHHHHH---------HcC--------CCcccCCCHH-----
Confidence 7999999999999999999999 8 9999999999877653 222 2445555432
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc----------hHHHHHHHHHHhhhccCCCCEE
Q 012349 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------ETKEVFEEISRYWKERITVPVI 193 (465)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~----------~l~~vl~~l~~~l~~~~~~~iv 193 (465)
|++.+... ..++.+++|++++++++|+||+|||+. +++++++++.+++++ +++|
T Consensus 55 ------~~l~~~~~-------~~~l~~t~d~~ea~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~---g~iV 118 (450)
T 3gg2_A 55 ------KMIARNVK-------AGRLRFGTEIEQAVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSR---YILI 118 (450)
T ss_dssp ------HHHHHHHH-------TTSEEEESCHHHHGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCS---CEEE
T ss_pred ------HHHHhhcc-------cCcEEEECCHHHHHhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCC---CCEE
Confidence 11110000 025788999999999999999999987 899999999999876 6777
Q ss_pred EEeeccccccccccccCCCHHHHHHhHhCCC--CccEEEEeCCchhhhhhc----cCceEEEEeC-ChhHHHHHHHHHcC
Q 012349 194 ISLAKGVEAELEAVPRIITPTQMINRATGVP--IENILYLGGPNIASEIYN----KEYANARICG-AEKWRKPLAKFLRR 266 (465)
Q Consensus 194 Is~~kGi~~~~~~~~~~~~~se~I~e~lg~~--~~~i~vlsGP~~a~ev~~----g~~t~~~~~~-~~~~~~~l~~ll~~ 266 (465)
|..+ ++.+. +.+.+++.+.+..+.. ...+.+.+||+++.+... ..++.+++++ +++..+.++.+|+.
T Consensus 119 V~~S-Tv~pg-----t~~~l~~~l~~~~~~~~~~~d~~v~~~Pe~a~eG~~~~~~~~p~~ivvG~~~~~~~~~~~~l~~~ 192 (450)
T 3gg2_A 119 VTKS-TVPVG-----SYRLIRKAIQEELDKREVLIDFDIASNPEFLKEGNAIDDFMKPDRVVVGVDSDRARELITSLYKP 192 (450)
T ss_dssp EECS-CCCTT-----HHHHHHHHHHHHHHHTTCCCCEEEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTT
T ss_pred EEee-eCCCc-----chHHHHHHHHHhccccCcCcceeEEechhhhcccchhhhccCCCEEEEEcCCHHHHHHHHHHHHH
Confidence 7666 57665 3344566666543211 134789999999998665 4555566664 56778999999985
Q ss_pred CCC--eEEecCChHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhcc
Q 012349 267 PHF--TVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAG 335 (465)
Q Consensus 267 ~g~--~v~~s~Di~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g 335 (465)
.+- ..+...|+.+.|+.|..-| +..++...+++|+..+|+++|++++++.+
T Consensus 193 ~~~~~~~~~~~d~~~aE~~Kl~~N------------------~~~a~~ia~~nE~~~l~~~~Gid~~~v~~ 245 (450)
T 3gg2_A 193 MLLNNFRVLFMDIASAEMTKYAAN------------------AMLATRISFMNDVANLCERVGADVSMVRL 245 (450)
T ss_dssp TCCSCCCEEEECHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred HhcCCCeEEecCHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 432 1567889999999765555 33356778999999999999999988765
No 21
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.81 E-value=4.6e-19 Score=185.60 Aligned_cols=291 Identities=16% Similarity=0.097 Sum_probs=192.4
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhcC
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (465)
|||+|||+|+||+++|..|+++ | ++|++|++++++++.++ +++ .+.+.+++.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~-G-----~~V~~~d~~~~~~~~l~---------~~~--------~~i~e~~l~----- 52 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR-G-----HEVIGVDVSSTKIDLIN---------QGK--------SPIVEPGLE----- 52 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHH---------TTC--------CSSCCTTHH-----
T ss_pred CEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHHHh---------CCC--------CCcCCCCHH-----
Confidence 6999999999999999999998 8 89999999988776532 221 233333321
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcch----------HHHHHHHHHHhhhccCCCCEE
Q 012349 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE----------TKEVFEEISRYWKERITVPVI 193 (465)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~----------l~~vl~~l~~~l~~~~~~~iv 193 (465)
|++..+... ..+.+++|+++++.++|+||+|||... ++++++++.+++++...+++|
T Consensus 53 ------~~~~~~~~~-------g~l~~t~~~~~~~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iV 119 (436)
T 1mv8_A 53 ------ALLQQGRQT-------GRLSGTTDFKKAVLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTV 119 (436)
T ss_dssp ------HHHHHHHHT-------TCEEEESCHHHHHHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEE
T ss_pred ------HHHHhhccc-------CceEEeCCHHHHhccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEE
Confidence 111110000 147788999888999999999999765 999999999988640002566
Q ss_pred EEeeccccccccccccCCCHHHHHHhHhCCCC-ccEEEEeCCchhhhhhc----cCceEEEEeC-ChhHHHHHHHHHcCC
Q 012349 194 ISLAKGVEAELEAVPRIITPTQMINRATGVPI-ENILYLGGPNIASEIYN----KEYANARICG-AEKWRKPLAKFLRRP 267 (465)
Q Consensus 194 Is~~kGi~~~~~~~~~~~~~se~I~e~lg~~~-~~i~vlsGP~~a~ev~~----g~~t~~~~~~-~~~~~~~l~~ll~~~ 267 (465)
|..+ ++.+.+ +...+.+.+.+..+... ..+.+.++|.++.+... ..+..++++. +++..+.++++|+..
T Consensus 120 V~~S-tv~~g~----t~~~l~~~l~~~~g~~~~~~~~v~~~Pe~~~~G~~~~~~~~~~~iv~G~~~~~~~~~~~~l~~~~ 194 (436)
T 1mv8_A 120 VVRS-TVLPGT----VNNVVIPLIEDCSGKKAGVDFGVGTNPEFLRESTAIKDYDFPPMTVIGELDKQTGDLLEEIYREL 194 (436)
T ss_dssp EECS-CCCTTH----HHHTHHHHHHHHHSCCBTTTBEEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTS
T ss_pred EEeC-CcCCCc----hHHHHHHHHHHhcCcccCCcEEEEECcccccccccchhccCCCEEEEEcCCHHHHHHHHHHHhcc
Confidence 6543 444431 12345555655434221 23467889998876443 2233345554 466778899999998
Q ss_pred CCeEEecCChHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccCchhhhhhcc--
Q 012349 268 HFTVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVTL-- 345 (465)
Q Consensus 268 g~~v~~s~Di~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~glgDl~~T~-- 345 (465)
+.+++. .|+...||.|.+-|.+ + ++....++|+..+++++|.+++++.. .+.+.
T Consensus 195 ~~~v~~-~~~~~ae~~Kl~~N~~-----------------~-a~~ia~~nE~~~l~~~~Gid~~~v~~-----~~~~~~r 250 (436)
T 1mv8_A 195 DAPIIR-KTVEVAEMIKYTCNVW-----------------H-AAKVTFANEIGNIAKAVGVDGREVMD-----VICQDHK 250 (436)
T ss_dssp SSCEEE-EEHHHHHHHHHHHHHH-----------------H-HHHHHHHHHHHHHHHHTTSCHHHHHH-----HHTTCTT
T ss_pred CCCEEc-CCHHHHHHHHHHHHHH-----------------H-HHHHHHHHHHHHHHHHhCCCHHHHHH-----HhcCCCC
Confidence 888777 8899999998877741 1 34457899999999999999876643 11111
Q ss_pred cC--chhHHHHHHHhcCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012349 346 LK--GRNAWYGQELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 423 (465)
Q Consensus 346 ~~--sRN~~~G~~l~~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~~ 423 (465)
.. +|+++.|..++.+-... ....+.++++++|+ + +|++++++++-
T Consensus 251 ~~~~~~~~~pg~g~gg~~~~k----------------D~~~l~~~a~~~g~--------------~-~pl~~~v~~in-- 297 (436)
T 1mv8_A 251 LNLSRYYMRPGFAFGGSCLPK----------------DVRALTYRASQLDV--------------E-HPMLGSLMRSN-- 297 (436)
T ss_dssp TTTSSTTCSCCSCCCSSSHHH----------------HHHHHHHHHHHTTC--------------C-CTTGGGHHHHH--
T ss_pred CCCcccCCCCcccccCcCcHh----------------hHHHHHHHHHHcCC--------------C-cHHHHHHHHHH--
Confidence 12 45554443222111111 14578899999994 6 89999999993
Q ss_pred CCCHHHHHHHHHhc
Q 012349 424 RESPIQAILEALRD 437 (465)
Q Consensus 424 ~~~~~~~~~~ll~~ 437 (465)
...|...+..++..
T Consensus 298 ~~~~~~~~~~~~~~ 311 (436)
T 1mv8_A 298 SNQVQKAFDLITSH 311 (436)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred hHhHHHHHHHHHHh
Confidence 34666666666654
No 22
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.79 E-value=3.4e-18 Score=172.67 Aligned_cols=292 Identities=14% Similarity=0.116 Sum_probs=171.5
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
+|||+|||+|+||+++|..|+++ | ++|++|+|++++++.++. .+ ..++.+.. ++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~-g-----~~V~~~~r~~~~~~~~~~---------~~---------~~~~~~~~--~~ 57 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALK-G-----QSVLAWDIDAQRIKEIQD---------RG---------AIIAEGPG--LA 57 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHH---------HT---------SEEEESSS--CC
T ss_pred cCeEEEECCCHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHHHHHh---------cC---------CeEEeccc--cc
Confidence 48999999999999999999998 7 899999999876654221 10 01121100 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCe-EEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
. ...+ .+++++++++.++|+||+|||++..+++++++.+++++ +++||++ +|+.
T Consensus 58 ~---------------------~~~~~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~l~~~l~~---~~~vv~~-~~~~ 112 (359)
T 1bg6_A 58 G---------------------TAHPDLLTSDIGLAVKDADVILIVVPAIHHASIAANIASYISE---GQLIILN-PGAT 112 (359)
T ss_dssp E---------------------EECCSEEESCHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCT---TCEEEES-SCCS
T ss_pred c---------------------ccccceecCCHHHHHhcCCEEEEeCCchHHHHHHHHHHHhCCC---CCEEEEc-CCCc
Confidence 0 0023 36788888889999999999999999999999998876 6778877 5643
Q ss_pred ccccccccCCCHHHHHHhH-------hCCCCccEE-EEeCCchhhhhh-ccCceEEEEe-C-ChhHHHHHHHHHcCCCCe
Q 012349 202 AELEAVPRIITPTQMINRA-------TGVPIENIL-YLGGPNIASEIY-NKEYANARIC-G-AEKWRKPLAKFLRRPHFT 270 (465)
Q Consensus 202 ~~~~~~~~~~~~se~I~e~-------lg~~~~~i~-vlsGP~~a~ev~-~g~~t~~~~~-~-~~~~~~~l~~ll~~~g~~ 270 (465)
... .. +.+.+.+. ++....+++ .+.||+++.... .+........ + +++..+.++++|.. +
T Consensus 113 ~~~-----~~-~~~~l~~~~~~~v~~~~~~~~~~~~~~~gpg~v~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~--~- 183 (359)
T 1bg6_A 113 GGA-----LE-FRKILRENGAPEVTIGETSSMLFTCRSERPGQVTVNAIKGAMDFACLPAAKAGWALEQIGSVLPQ--Y- 183 (359)
T ss_dssp SHH-----HH-HHHHHHHTTCCCCEEEEESSCSEEEECSSTTEEEEEEECSCEEEEEESGGGHHHHHHHHTTTCTT--E-
T ss_pred hHH-----HH-HHHHHHhcCCCCeEEEEecCCcEEEEeCCCCEEEEEEeecceEEEeccccccHHHHHHHHHHhhh--c-
Confidence 221 11 22333331 100012333 357888766443 2332222222 2 33356778888853 3
Q ss_pred EEecCChHHHHHHHHHHHHHHH--------HHHhhh----cccCCC--cchHHHHHHHHHHHHHHHHHHhCCCcchhccC
Q 012349 271 VWDNGDLVTHEVMGGLKNVYAI--------GAGMVA----ALTNES--ATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP 336 (465)
Q Consensus 271 v~~s~Di~gve~~galKNviAi--------a~Gi~~----gl~~g~--~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~ 336 (465)
..++|+ |++++||+.++ .+|... .+.++. .+..+.++.+++.|+..+++++|.+++++...
T Consensus 184 -~~~~di----~~k~~~nvn~~~n~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~~ 258 (359)
T 1bg6_A 184 -VAVENV----LHTSLTNVNAVMHPLPTLLNAARCESGTPFQYYLEGITPSVGSLAEKVDAERIAIAKAFDLNVPSVCEW 258 (359)
T ss_dssp -EECSCH----HHHHHCCHHHHHTHHHHHTTHHHHHTTCCCBHHHHHCCHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHH
T ss_pred -EEcCCh----HhhhccCCCccccHHHHHhhhchhhcCCccchhhcCCCHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHH
Confidence 356786 78888886555 233321 111110 12245789999999999999999987655331
Q ss_pred chhhhhhcccCchhHHHHHHHhcCCChhhHhHhhcCCcccchHHH-------HHHHHHHHHHcCCCCCCCCCCCCCCccc
Q 012349 337 LLADTYVTLLKGRNAWYGQELAKGRLTLDLGDSIKGKGMIQGISA-------VKAFYELLSQSSLSVLHPEENKPVATVE 409 (465)
Q Consensus 337 glgDl~~T~~~sRN~~~G~~l~~g~~~~~~~~~~~~~~~vEG~~t-------~~~v~~la~~~~~~~~~~~~~~~~~~v~ 409 (465)
+......+ ..|. ....+ .+ + +.+.+.....+++.+. ...+.++++++|+ +
T Consensus 259 -~~~~~~~~--~~~l---~~~~~-~~-s-m~~d~~~~~e~~~~~~~~D~~~~~g~~~~~a~~~gv--------------~ 315 (359)
T 1bg6_A 259 -YKESYGQS--PATI---YEAVQ-GN-P-AYRGIAGPINLNTRYFFEDVSTGLVPLSELGRAVNV--------------P 315 (359)
T ss_dssp -C---------CCSH---HHHHH-TC-G-GGTTCBCCSSSCCHHHHHHHHTTHHHHHHHHHHTTC--------------C
T ss_pred -HHHHhCCC--cccH---HHHHh-cc-h-hhcCCCCCCCCCccceecCcCccHHHHHHHHHHcCC--------------C
Confidence 10000000 1110 00000 01 0 1111111123555432 2479999999995 7
Q ss_pred CCcHHHHHHHHHhc
Q 012349 410 LCPILKMLYKILIM 423 (465)
Q Consensus 410 ~~Pi~~~vy~il~~ 423 (465)
+|+++++|+++..
T Consensus 316 -~P~~~~l~~~~~~ 328 (359)
T 1bg6_A 316 -TPLIDAVLDLISS 328 (359)
T ss_dssp -CHHHHHHHHHHHH
T ss_pred -chHHHHHHHHHHH
Confidence 8999999999863
No 23
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.79 E-value=2.8e-18 Score=169.32 Aligned_cols=259 Identities=12% Similarity=0.041 Sum_probs=174.0
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
||||+|||+|+||+++|..|+++ | ++|++|+|+++.++.+. +.
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~-G-----~~V~~~dr~~~~~~~~~---------~~---------------------- 43 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRA-G-----FDVTVWNRNPAKCAPLV---------AL---------------------- 43 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHH-T-----CCEEEECSSGGGGHHHH---------HH----------------------
T ss_pred CCeEEEEccCHHHHHHHHHHHHC-C-----CeEEEEcCCHHHHHHHH---------HC----------------------
Confidence 47999999999999999999999 8 89999999987655311 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH---HHHHHhhhccCCCCEEEEeec
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF---EEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl---~~l~~~l~~~~~~~ivIs~~k 198 (465)
++..+++++++++++|+||++||+. .+++++ +.+.+.+.+ ++++|.++.
T Consensus 44 ------------------------g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l~~~l~~---g~~vv~~st 96 (287)
T 3pdu_A 44 ------------------------GARQASSPAEVCAACDITIAMLADPAAAREVCFGANGVLEGIGG---GRGYIDMST 96 (287)
T ss_dssp ------------------------TCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGTCCT---TCEEEECSC
T ss_pred ------------------------CCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhhhhcccC---CCEEEECCC
Confidence 2345678888899999999999985 888988 778877765 677887775
Q ss_pred cccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhh--hhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCC
Q 012349 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE--IYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD 276 (465)
Q Consensus 199 Gi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~e--v~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~D 276 (465)
+ .+.+ ...+.+.+.+ .| +.++.+|.+... ...+..+ ++++++++..+.++++|+..+.+++...|
T Consensus 97 ~-~~~~-----~~~~~~~~~~-~g-----~~~~~~pv~g~~~~a~~g~l~-~~~gg~~~~~~~~~~ll~~~g~~~~~~g~ 163 (287)
T 3pdu_A 97 V-DDET-----STAIGAAVTA-RG-----GRFLEAPVSGTKKPAEDGTLI-ILAAGDQSLFTDAGPAFAALGKKCLHLGE 163 (287)
T ss_dssp C-CHHH-----HHHHHHHHHH-TT-----CEEEECCEECCHHHHHHTCEE-EEEEECHHHHHHTHHHHHHHEEEEEECSS
T ss_pred C-CHHH-----HHHHHHHHHH-cC-----CEEEECCccCCHHHHhcCCEE-EEEeCCHHHHHHHHHHHHHhCCCEEEcCC
Confidence 4 3321 1122222322 12 123334433222 1234332 34566778889999999988888888777
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccC-chhhhhhcccCchhHHHHH
Q 012349 277 LVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLLKGRNAWYGQ 355 (465)
Q Consensus 277 i~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~-glgDl~~T~~~sRN~~~G~ 355 (465)
.-..++.+.+-|. ....+..+++|+..++++.|.+++++... +.+. ..+...+|+ +.
T Consensus 164 ~g~~~~~Kl~~N~------------------~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~--~~s~~~~~~--~~ 221 (287)
T 3pdu_A 164 VGQGARMKLVVNM------------------IMGQMMTALGEGMALGRNCGLDGGQLLEVLDAGA--MANPMFKGK--GQ 221 (287)
T ss_dssp TTHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHST--TCCHHHHHH--HH
T ss_pred CChHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcc--ccChHHHhh--cc
Confidence 6555666555553 22345678899999999999999887652 2211 111123343 45
Q ss_pred HHhcCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012349 356 ELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 422 (465)
Q Consensus 356 ~l~~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~ 422 (465)
.+.++... .+...-.+....+.+.+++++.|+ + +|+++.+++++.
T Consensus 222 ~~~~~~~~-------~~~~~~~~~kd~~~~~~~a~~~g~--------------~-~p~~~~~~~~~~ 266 (287)
T 3pdu_A 222 MLLSGEFP-------TSFPLKHMQKDLRLAVELGDRLGQ--------------P-LHGAATANESFK 266 (287)
T ss_dssp HHHHTCCC-------CSSBHHHHHHHHHHHHHHHHHHTC--------------C-CHHHHHHHHHHH
T ss_pred ccccCCCC-------CCCcHHHHHHHHHHHHHHHHHcCC--------------C-ChHHHHHHHHHH
Confidence 55544211 111234777888999999999995 6 899999998875
No 24
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.78 E-value=7e-18 Score=166.48 Aligned_cols=260 Identities=11% Similarity=0.037 Sum_probs=174.6
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhcC
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (465)
|||+|||+|.||+++|..|+++ | ++|++|+|+++.++.+ .+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-G-----~~V~~~dr~~~~~~~~---------~~------------------------ 42 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-G-----CSVTIWNRSPEKAEEL---------AA------------------------ 42 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSGGGGHHH---------HH------------------------
T ss_pred CEEEEEeecHHHHHHHHHHHHC-C-----CeEEEEcCCHHHHHHH---------HH------------------------
Confidence 7999999999999999999998 7 9999999998765431 10
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC-cchHHHHH---HHHHHhhhccCCCCEEEEeecc
Q 012349 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVF---EEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVp-s~~l~~vl---~~l~~~l~~~~~~~ivIs~~kG 199 (465)
.++..++++++++.++|+||+||| ++.+++++ +++.+.+++ ++++|.++ +
T Consensus 43 ----------------------~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~---~~~vi~~s-t 96 (287)
T 3pef_A 43 ----------------------LGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGVLEGIGE---GRGYVDMS-T 96 (287)
T ss_dssp ----------------------TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCT---TCEEEECS-C
T ss_pred ----------------------CCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchHhhcCCC---CCEEEeCC-C
Confidence 024566788898999999999999 57899999 888888876 67777765 4
Q ss_pred ccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCChHH
Q 012349 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVT 279 (465)
Q Consensus 200 i~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~g 279 (465)
+.+.+ ...+.+.+.+ .|.......+..+|..+. .+... ++++++++..+.++.+|+..+.+++...+.-.
T Consensus 97 ~~~~~-----~~~~~~~~~~-~g~~~~~~pv~g~~~~a~---~g~l~-~~~gg~~~~~~~~~~ll~~~g~~~~~~g~~g~ 166 (287)
T 3pef_A 97 VDPAT-----SQRIGVAVVA-KGGRFLEAPVSGSKKPAE---DGTLI-ILAAGDRNLYDEAMPGFEKMGKKIIHLGDVGK 166 (287)
T ss_dssp CCHHH-----HHHHHHHHHH-TTCEEEECCEECCHHHHH---HTCEE-EEEEECHHHHHHHHHHHHHHEEEEEECSSTTH
T ss_pred CCHHH-----HHHHHHHHHH-hCCEEEECCCcCCHHHHh---cCCEE-EEEeCCHHHHHHHHHHHHHhCCCeEEeCCCCH
Confidence 44431 1222233322 221100112344454442 33322 34566778889999999988888888777655
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccC-chhhhhhcccCchhHHHHHHHh
Q 012349 280 HEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLLKGRNAWYGQELA 358 (465)
Q Consensus 280 ve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~-glgDl~~T~~~sRN~~~G~~l~ 358 (465)
.++.+.+-|.+ ...+..+++|+..++++.|.+++++... +.+. ..+...+|+ +..+.
T Consensus 167 ~~~~Kl~~N~~------------------~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~--~~s~~~~~~--~~~~~ 224 (287)
T 3pef_A 167 GAEMKLVVNMV------------------MGGMMACFCEGLALGEKAGLATDAILDVIGAGA--MANPMFALK--GGLIR 224 (287)
T ss_dssp HHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHST--TCCHHHHHH--HHHHH
T ss_pred HHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcc--cccHHHHHH--hhhhh
Confidence 66666555532 1234567899999999999999887652 2211 111123333 55555
Q ss_pred cCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012349 359 KGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 422 (465)
Q Consensus 359 ~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~ 422 (465)
++... .+-..-.+....+.+.+++++.|+ + +|+++.+++++.
T Consensus 225 ~~~~~-------~~~~~~~~~kd~~~~~~~a~~~g~--------------~-~p~~~~~~~~~~ 266 (287)
T 3pef_A 225 DRNFA-------PAFPLKHMQKDLRLAVALGDRVGQ--------------P-LVASAAANELFK 266 (287)
T ss_dssp TTCCC-------CSSBHHHHHHHHHHHHHHHHHHTC--------------C-CHHHHHHHHHHH
T ss_pred cCCCC-------CCCchHHHHHHHHHHHHHHHHcCC--------------C-ChHHHHHHHHHH
Confidence 44211 011234667778899999999994 6 899999998875
No 25
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.77 E-value=1.6e-17 Score=164.17 Aligned_cols=258 Identities=14% Similarity=0.098 Sum_probs=169.5
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
+|||+|||+|.||++++..|++. | ++|.+|+|+++.++.+ .+.
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~~~~~~~~~~---------~~~---------------------- 47 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKA-G-----YSLVVSDRNPEAIADV---------IAA---------------------- 47 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHT-T-----CEEEEECSCHHHHHHH---------HHT----------------------
T ss_pred cceEEEECchHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHHHH---------HHC----------------------
Confidence 37999999999999999999988 7 8999999987654431 100
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC-cchHHHHH---HHHHHhhhccCCCCEEEEeec
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVF---EEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVp-s~~l~~vl---~~l~~~l~~~~~~~ivIs~~k 198 (465)
++..++++++++.++|+||+||| ++.++.++ +++.+.+++ +++||++++
T Consensus 48 ------------------------g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~---~~~vv~~s~ 100 (299)
T 1vpd_A 48 ------------------------GAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKP---GTVLIDMSS 100 (299)
T ss_dssp ------------------------TCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCT---TCEEEECSC
T ss_pred ------------------------CCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchHhhcCCC---CCEEEECCC
Confidence 23345677788889999999999 66788888 678887776 688999998
Q ss_pred cccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhh--ccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCC
Q 012349 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIY--NKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD 276 (465)
Q Consensus 199 Gi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~--~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~D 276 (465)
|..... +.+.+.++.. .+.++..|-+..... .+.. .++.+++++..+.++++|+..|+++++.+|
T Consensus 101 ~~~~~~----------~~l~~~~~~~--g~~~~~~pv~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~g~~~~~~~~ 167 (299)
T 1vpd_A 101 IAPLAS----------REISDALKAK--GVEMLDAPVSGGEPKAIDGTL-SVMVGGDKAIFDKYYDLMKAMAGSVVHTGD 167 (299)
T ss_dssp CCHHHH----------HHHHHHHHTT--TCEEEECCEESHHHHHHHTCE-EEEEESCHHHHHHHHHHHHTTEEEEEEEES
T ss_pred CCHHHH----------HHHHHHHHHc--CCeEEEecCCCCHhHHhcCCE-EEEeCCCHHHHHHHHHHHHHHcCCeEEeCC
Confidence 875321 2344444321 112233333222111 2222 234466777889999999999999998888
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccC-chhhhhhcccCchhHHHHH
Q 012349 277 LVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLLKGRNAWYGQ 355 (465)
Q Consensus 277 i~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~-glgDl~~T~~~sRN~~~G~ 355 (465)
.-...|.+.+-|. ...++..++.|+..++++.|.+++++..+ +.++. .+...+++ +.
T Consensus 168 ~~~~~~~Kl~~n~------------------~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~--~s~~~~~~--~~ 225 (299)
T 1vpd_A 168 IGAGNVTKLANQV------------------IVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLA--GSTVLDAK--AP 225 (299)
T ss_dssp TTHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTT--CCHHHHHH--HH
T ss_pred cCHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccCC--CCHHHHHh--hh
Confidence 7666676665553 23567789999999999999998876542 21111 00000111 11
Q ss_pred HHhcCCChhhHhHhhcCCcccchH-HHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012349 356 ELAKGRLTLDLGDSIKGKGMIQGI-SAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 422 (465)
Q Consensus 356 ~l~~g~~~~~~~~~~~~~~~vEG~-~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~ 422 (465)
.+-++. ...+..++.. ...+.++++++++|+ + +|+++++|+++.
T Consensus 226 ~~l~~~--------~~~g~~~~~~~kd~~~~~~~a~~~gv--------------~-~p~~~~~~~~~~ 270 (299)
T 1vpd_A 226 MVMDRN--------FKPGFRIDLHIKDLANALDTSHGVGA--------------Q-LPLTAAVMEMMQ 270 (299)
T ss_dssp HHHTTC--------CCCSSBHHHHHHHHHHHHHHHHHHTC--------------C-CHHHHHHHHHHH
T ss_pred HhhcCC--------CCCCCChHHHHHHHHHHHHHHHHcCC--------------C-ChHHHHHHHHHH
Confidence 111111 0111233333 356789999999995 6 899999999886
No 26
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.77 E-value=1.5e-18 Score=170.03 Aligned_cols=207 Identities=12% Similarity=0.072 Sum_probs=151.2
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhcC
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (465)
|||+|||+|+||+++|..|+++ | ++|++|+|+++.++.+ .+. +.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~~~~~~~~~~---------~~~---------------g~------ 44 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR-G-----HYLIGVSRQQSTCEKA---------VER---------------QL------ 44 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHH---------HHT---------------TS------
T ss_pred CEEEEEcCcHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHHH---------HhC---------------CC------
Confidence 6999999999999999999988 7 8999999988654431 110 00
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccccc
Q 012349 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (465)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~~ 203 (465)
...++++++++ .++|+||+|||++.+.++++++.+++++ +++|++++ ++...
T Consensus 45 -----------------------~~~~~~~~~~~-~~~D~vi~av~~~~~~~~~~~l~~~~~~---~~~vv~~~-~~~~~ 96 (279)
T 2f1k_A 45 -----------------------VDEAGQDLSLL-QTAKIIFLCTPIQLILPTLEKLIPHLSP---TAIVTDVA-SVKTA 96 (279)
T ss_dssp -----------------------CSEEESCGGGG-TTCSEEEECSCHHHHHHHHHHHGGGSCT---TCEEEECC-SCCHH
T ss_pred -----------------------CccccCCHHHh-CCCCEEEEECCHHHHHHHHHHHHhhCCC---CCEEEECC-CCcHH
Confidence 11245677777 8999999999999999999999988876 67888873 33322
Q ss_pred ccccccCCCHHHHHHhHhCC--CCccEE--EEeCCchhh-hhhccCceEEEEe--CChhHHHHHHHHHcCCCCeEEecCC
Q 012349 204 LEAVPRIITPTQMINRATGV--PIENIL--YLGGPNIAS-EIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGD 276 (465)
Q Consensus 204 ~~~~~~~~~~se~I~e~lg~--~~~~i~--vlsGP~~a~-ev~~g~~t~~~~~--~~~~~~~~l~~ll~~~g~~v~~s~D 276 (465)
. . +.+.+.+.. +.+++. +.+||+++. ++..+.++.++.. .+++..+.++++|+..|++++..+|
T Consensus 97 ~--------~-~~~~~~~~~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~ 167 (279)
T 2f1k_A 97 I--------A-EPASQLWSGFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTDPEQLACLRSVLEPLGVKIYLCTP 167 (279)
T ss_dssp H--------H-HHHHHHSTTCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTCCHHHHHHHHHHHGGGTCEEEECCH
T ss_pred H--------H-HHHHHHhCCEeecCcccCCccCCHHHHhHHHhCCCcEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 0 1 223333321 012222 445788776 4566666555543 3567789999999999999999999
Q ss_pred hHHHHHHHHHHHH-HHHHHHhhhcccCCC----cchHHHHHHHHHHHHHHHH
Q 012349 277 LVTHEVMGGLKNV-YAIGAGMVAALTNES----ATSKSVYFAHCTSEMVFIT 323 (465)
Q Consensus 277 i~gve~~galKNv-iAia~Gi~~gl~~g~----~n~~a~li~~~~~E~~~l~ 323 (465)
....+|+++++|. ..+++++++++..++ .+....++++++.|+.+++
T Consensus 168 ~~~~~~~~~~~~~p~~i~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~ 219 (279)
T 2f1k_A 168 ADHDQAVAWISHLPVMVSAALIQACAGEKDGDILKLAQNLASSGFRDTSRVG 219 (279)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHTCSCHHHHHHHHHHCCHHHHHHHTGG
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHhcccccchhHHHhhcCCcccchhccc
Confidence 9999999999995 888889998876533 2455678889999987765
No 27
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.77 E-value=2.2e-17 Score=164.89 Aligned_cols=258 Identities=12% Similarity=0.091 Sum_probs=164.9
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
+|||+|||+|+||+++|..|++. | ++|++|+|+++.++.+ .+.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~-g-----~~V~~~~~~~~~~~~~---------~~~---------------------- 72 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKM-G-----HTVTVWNRTAEKCDLF---------IQE---------------------- 72 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSGGGGHHH---------HHT----------------------
T ss_pred CCeEEEEcccHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHHHH---------HHc----------------------
Confidence 48999999999999999999988 7 8999999998654431 100
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC-cchHHHHHHHHH---HhhhccCCCCEEEEeec
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVFEEIS---RYWKERITVPVIISLAK 198 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVp-s~~l~~vl~~l~---~~l~~~~~~~ivIs~~k 198 (465)
++..++++.+++.++|+||+||| ++.+++++..+. +.+.+ +++||++++
T Consensus 73 ------------------------g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~~~~l~~---~~~vv~~s~ 125 (316)
T 2uyy_A 73 ------------------------GARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRP---GKCYVDMST 125 (316)
T ss_dssp ------------------------TCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCT---TCEEEECSC
T ss_pred ------------------------CCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhHhhcCCC---CCEEEECCC
Confidence 12345677788889999999999 788999887654 55555 678888887
Q ss_pred cccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhh--hhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCC
Q 012349 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE--IYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD 276 (465)
Q Consensus 199 Gi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~e--v~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~D 276 (465)
+-... .+.+.+.++.. .+.++.+|.+..+ ...+... .+++++++..+.++++|+..|++++...|
T Consensus 126 ~~~~~----------~~~l~~~~~~~--~~~~v~~p~~g~~~~~~~g~~~-~~~~g~~~~~~~v~~ll~~~g~~~~~~~~ 192 (316)
T 2uyy_A 126 VDADT----------VTELAQVIVSR--GGRFLEAPVSGNQQLSNDGMLV-ILAAGDRGLYEDCSSCFQAMGKTSFFLGE 192 (316)
T ss_dssp CCHHH----------HHHHHHHHHHT--TCEEEECCEESCHHHHHHTCEE-EEEEECHHHHHHTHHHHHHHEEEEEECSS
T ss_pred CCHHH----------HHHHHHHHHHc--CCEEEEcCccCChhHHhhCCEE-EEeCCCHHHHHHHHHHHHHhcCCEEEeCC
Confidence 53221 12233433211 1234555654322 2334322 33455677788999999999999988878
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccC-chhhhhhcccCchhHHHHH
Q 012349 277 LVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLLKGRNAWYGQ 355 (465)
Q Consensus 277 i~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~-glgDl~~T~~~sRN~~~G~ 355 (465)
+....|.+.+.|. ..+. +..++.|+..++++.|.+++++... ..++.- +...++. ..
T Consensus 193 ~~~~~~~K~~~n~---~~~~---------------~~~~~~Ea~~la~~~G~~~~~~~~~~~~~~~~--s~~~~~~--~~ 250 (316)
T 2uyy_A 193 VGNAAKMMLIVNM---VQGS---------------FMATIAEGLTLAQVTGQSQQTLLDILNQGQLA--SIFLDQK--CQ 250 (316)
T ss_dssp TTHHHHHHHHHHH---HHHH---------------HHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTC--CHHHHHH--HH
T ss_pred CCHHHHHHHHHHH---HHHH---------------HHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCC--CHHHHHh--hH
Confidence 6545555444443 2221 4577899999999999998776542 111100 0000111 11
Q ss_pred HHhcCCChhhHhHhhcCCcccch-HHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012349 356 ELAKGRLTLDLGDSIKGKGMIQG-ISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 422 (465)
Q Consensus 356 ~l~~g~~~~~~~~~~~~~~~vEG-~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~ 422 (465)
.+-++. ...+.++|. ......+.+++++.|+ + +|+++++|+++.
T Consensus 251 ~~l~~~--------~~~g~~~~~~~kd~~~~~~~a~~~gv--------------~-~p~~~~v~~~~~ 295 (316)
T 2uyy_A 251 NILQGN--------FKPDFYLKYIQKDLRLAIALGDAVNH--------------P-TPMAAAANEVYK 295 (316)
T ss_dssp HHHHTC--------CCCSSBHHHHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHH
T ss_pred HhhcCC--------CCCCCcHHHHHHHHHHHHHHHHHhCC--------------C-ChHHHHHHHHHH
Confidence 111110 111223444 5566789999999995 6 899999999986
No 28
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.76 E-value=1.1e-18 Score=185.17 Aligned_cols=283 Identities=13% Similarity=0.040 Sum_probs=181.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
+|||+|||+|+||++||..|+++ | ++|++|+|++++++.++ +. .++
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~-G-----~~V~v~~r~~~~~~~l~---------~~-------------~~~------ 60 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR-G-----YTVSIFNRSREKTEEVI---------AE-------------NPG------ 60 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSSHHHHHHHH---------HH-------------STT------
T ss_pred CCeEEEEccHHHHHHHHHHHHhC-C-----CeEEEEeCCHHHHHHHH---------hh-------------CCC------
Confidence 47899999999999999999998 7 89999999987665421 10 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC---CCEEEEecCc-chHHHHHHHHHHhhhccCCCCEEEEeec
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD---ADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~---aDiVIlaVps-~~l~~vl~~l~~~l~~~~~~~ivIs~~k 198 (465)
.++..++++++++.+ +|+||++||+ +.++++++++.+++++ +++||+++|
T Consensus 61 -----------------------~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~l~~---g~iIId~s~ 114 (480)
T 2zyd_A 61 -----------------------KKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDK---GDIIIDGGN 114 (480)
T ss_dssp -----------------------SCEEECSSHHHHHHTBCSSCEEEECSCSSSHHHHHHHHHGGGCCT---TCEEEECSC
T ss_pred -----------------------CCeEEeCCHHHHHhCCCCCCEEEEECCCHHHHHHHHHHHHhhcCC---CCEEEECCC
Confidence 035567888888776 9999999999 6899999999998876 689999999
Q ss_pred cccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCChH
Q 012349 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLV 278 (465)
Q Consensus 199 Gi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~ 278 (465)
|....+ ..+.+.+.+ .|.......+..||..+. .|. + ++++++++..+.++.+|+..+.++. |
T Consensus 115 g~~~~t------~~l~~~l~~-~g~~~v~~pv~gg~~~a~---~g~-~-i~~gg~~~~~~~v~~ll~~~g~~~~---d-- 177 (480)
T 2zyd_A 115 TFFQDT------IRRNRELSA-EGFNFIGTGVSGGEEGAL---KGP-S-IMPGGQKEAYELVAPILTKIAAVAE---D-- 177 (480)
T ss_dssp CCHHHH------HHHHHHHHH-TTCEEEEEEEESHHHHHH---HCC-E-EEEESCHHHHHHHHHHHHHHSCBCT---T--
T ss_pred CCHHHH------HHHHHHHHH-CCCCeeCCccccCHhHHh---cCC-e-EEecCCHHHHHHHHHHHHHHhcccc---C--
Confidence 986542 112233332 121101122333444432 343 3 5567778888999999987665410 1
Q ss_pred H---HHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHH-hCCCcchhccC------c-hhhhhhccc-
Q 012349 279 T---HEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHL-LAEEPEKLAGP------L-LADTYVTLL- 346 (465)
Q Consensus 279 g---ve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a-~G~~~~t~~g~------g-lgDl~~T~~- 346 (465)
| +++.|. .|....+++. .|....++.+++.|+..++++ +|.+++++.++ | ++|++++|+
T Consensus 178 Ge~~v~~~g~--------~G~g~~~Kl~-~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~l~~~w~~g~~~s~l~~~~~ 248 (480)
T 2zyd_A 178 GEPCVTYIGA--------DGAGHYVKMV-HNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTFTEWNNGELSSYLIDITK 248 (480)
T ss_dssp SCBSBCCCBS--------TTHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTTCBHHHHHHH
T ss_pred CCceEEEECC--------ccHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcCCCcccHHHHHHH
Confidence 1 111111 1222333332 344456788999999999999 79998887652 4 788888885
Q ss_pred -CchhHHHHHHHhcCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHH--HHHHhc
Q 012349 347 -KGRNAWYGQELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKML--YKILIM 423 (465)
Q Consensus 347 -~sRN~~~G~~l~~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~v--y~il~~ 423 (465)
..||+.+ ..+...+.+.+. .++..+| +.+.++++++|+ + +|++... ++++..
T Consensus 249 ~~l~~~d~----~~~~~v~~i~D~--~~~k~tG----~~~~~~A~~~gv--------------~-~Pi~~~av~ar~~s~ 303 (480)
T 2zyd_A 249 DIFTKKDE----DGNYLVDVILDE--AANKGTG----KWTSQSALDLGE--------------P-LSLITESVFARYISS 303 (480)
T ss_dssp HHHHCBCT----TSSBGGGGBCCC--CCCCSCT----THHHHHHHHHTC--------------C-CHHHHHHHHHHHHHT
T ss_pred HHHhcCCC----CCcchHHHHHHH--hcCchHH----HHHHHHHHHcCC--------------C-CchHHHHHHHHhhhc
Confidence 2334333 223333222211 1223455 356788999994 6 8999984 777776
Q ss_pred CCCHHHHHHHHHh
Q 012349 424 RESPIQAILEALR 436 (465)
Q Consensus 424 ~~~~~~~~~~ll~ 436 (465)
.++.......++.
T Consensus 304 ~k~~R~~~~~~~~ 316 (480)
T 2zyd_A 304 LKDQRVAASKVLS 316 (480)
T ss_dssp CHHHHHHHHTTCC
T ss_pred chhhhHHhhcccC
Confidence 5554444444443
No 29
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.76 E-value=2.6e-17 Score=164.63 Aligned_cols=265 Identities=13% Similarity=0.086 Sum_probs=173.6
Q ss_pred CCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhh
Q 012349 39 AEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (465)
Q Consensus 39 ~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~ 118 (465)
.+..+|||+|||+|.||+++|..|+++ | ++|++|+|+++.++.+ .+
T Consensus 17 ~~~~m~~I~iIG~G~mG~~~A~~l~~~-G-----~~V~~~dr~~~~~~~l---------~~------------------- 62 (310)
T 3doj_A 17 RGSHMMEVGFLGLGIMGKAMSMNLLKN-G-----FKVTVWNRTLSKCDEL---------VE------------------- 62 (310)
T ss_dssp -CCCSCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSGGGGHHH---------HH-------------------
T ss_pred ccccCCEEEEECccHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHH---------HH-------------------
Confidence 344678999999999999999999998 8 8999999998765431 10
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc-chHHHHH---HHHHHhhhccCCCCEEE
Q 012349 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVF---EEISRYWKERITVPVII 194 (465)
Q Consensus 119 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps-~~l~~vl---~~l~~~l~~~~~~~ivI 194 (465)
.++..++++++++.++|+||+|||. ..+++++ +.+.+.+.+ +++||
T Consensus 63 ---------------------------~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~---g~~vv 112 (310)
T 3doj_A 63 ---------------------------HGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKGGVLEQICE---GKGYI 112 (310)
T ss_dssp ---------------------------TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCT---TCEEE
T ss_pred ---------------------------CCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCchhhhhccCC---CCEEE
Confidence 0244567888889999999999986 5888888 778777766 67777
Q ss_pred EeeccccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEec
Q 012349 195 SLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDN 274 (465)
Q Consensus 195 s~~kGi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s 274 (465)
.++ ++.+.+ ...+.+.+.+ .|.......+..+|..+. .+..+ ++++++++..+.++.+|+..+.+++..
T Consensus 113 ~~s-t~~~~~-----~~~~~~~~~~-~g~~~v~~pv~g~~~~a~---~g~l~-i~~gg~~~~~~~~~~ll~~~g~~~~~~ 181 (310)
T 3doj_A 113 DMS-TVDAET-----SLKINEAITG-KGGRFVEGPVSGSKKPAE---DGQLI-ILAAGDKALFEESIPAFDVLGKRSFYL 181 (310)
T ss_dssp ECS-CCCHHH-----HHHHHHHHHH-TTCEEEECCEECCHHHHH---HTCEE-EEEEECHHHHHHHHHHHHHHEEEEEEC
T ss_pred ECC-CCCHHH-----HHHHHHHHHH-cCCEEEeCCCCCChhHHh---cCCeE-EEEcCCHHHHHHHHHHHHHhCCCEEEe
Confidence 766 444331 1222233322 121100011333444332 34332 345667788899999999888888888
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccC-chhhhhhcccCchhHHH
Q 012349 275 GDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLLKGRNAWY 353 (465)
Q Consensus 275 ~Di~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~-glgDl~~T~~~sRN~~~ 353 (465)
.+.-..++.+.+-|.+ ...+..+++|+..++++.|.+++++... +.+ ...+...+| .
T Consensus 182 g~~g~a~~~Kl~~N~~------------------~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~--~~~s~~~~~--~ 239 (310)
T 3doj_A 182 GQVGNGAKMKLIVNMI------------------MGSMMNAFSEGLVLADKSGLSSDTLLDILDLG--AMTNPMFKG--K 239 (310)
T ss_dssp SSTTHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHS--TTCCHHHHH--H
T ss_pred CCcCHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc--ccccHHHHH--H
Confidence 7765566666555532 1234467899999999999999887542 111 000011222 2
Q ss_pred HHHHhcCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012349 354 GQELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 422 (465)
Q Consensus 354 G~~l~~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~ 422 (465)
|..+.++.-. .+-..-.+....+.+.+++++.|+ + +|+++.+++++.
T Consensus 240 ~~~~~~~~~~-------~~f~~~~~~KDl~~~~~~a~~~g~--------------~-~p~~~~~~~~~~ 286 (310)
T 3doj_A 240 GPSMNKSSYP-------PAFPLKHQQKDMRLALALGDENAV--------------S-MPVAAAANEAFK 286 (310)
T ss_dssp HHHHHTTCCC-------CSSBHHHHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHH
T ss_pred hhhhhcCCCC-------CCccHHHHHHHHHHHHHHHHHcCC--------------C-ChHHHHHHHHHH
Confidence 4445443210 011234677788899999999995 6 899999999885
No 30
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.75 E-value=1.7e-17 Score=175.91 Aligned_cols=281 Identities=12% Similarity=0.070 Sum_probs=177.9
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhcC
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (465)
|||+|||+|+||+++|..|+++ | ++|++|+|++++++.++. ..+ +. +. +
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~-G-----~~V~v~dr~~~~~~~l~~--------~~g--------~~---~~-----~- 50 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK-G-----FKVAVFNRTYSKSEEFMK--------ANA--------SA---PF-----A- 50 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSHHHHHHHHH--------HTT--------TS---TT-----G-
T ss_pred CEEEEEChHHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHH--------hcC--------CC---CC-----C-
Confidence 7899999999999999999998 8 899999999876654221 101 00 10 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhc---CCCEEEEecCcc-hHHHHHHHHHHhhhccCCCCEEEEeecc
Q 012349 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW---DADIVINGLPST-ETKEVFEEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~---~aDiVIlaVps~-~l~~vl~~l~~~l~~~~~~~ivIs~~kG 199 (465)
.++..++++++++. ++|+||++||+. .++++++++.+++++ +++||++++|
T Consensus 51 ----------------------~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~vl~~l~~~l~~---g~iIId~sng 105 (478)
T 1pgj_A 51 ----------------------GNLKAFETMEAFAASLKKPRKALILVQAGAATDSTIEQLKKVFEK---GDILVDTGNA 105 (478)
T ss_dssp ----------------------GGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHHHHHHHHCCT---TCEEEECCCC
T ss_pred ----------------------CCeEEECCHHHHHhcccCCCEEEEecCChHHHHHHHHHHHhhCCC---CCEEEECCCC
Confidence 02556778888776 499999999995 899999999998876 6889999999
Q ss_pred ccccccccccCCCHHHHHHhHhCCCCcc---EEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCe------
Q 012349 200 VEAELEAVPRIITPTQMINRATGVPIEN---ILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFT------ 270 (465)
Q Consensus 200 i~~~~~~~~~~~~~se~I~e~lg~~~~~---i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~------ 270 (465)
....+ +.+.+.+...... ..+..||..+ ..|. + ++++++++..+.++++|+..+.+
T Consensus 106 ~~~~~----------~~l~~~l~~~g~~~v~~pv~gg~~~a---~~g~-~-i~~gg~~~~~~~v~~ll~~~g~~~~dg~~ 170 (478)
T 1pgj_A 106 HFKDQ----------GRRAQQLEAAGLRFLGMGISGGEEGA---RKGP-A-FFPGGTLSVWEEIRPIVEAAAAKADDGRP 170 (478)
T ss_dssp CHHHH----------HHHHHHHHTTTCEEEEEEEESHHHHH---HHCC-E-EEEEECHHHHHHHHHHHHHHSCBCTTSCB
T ss_pred ChHHH----------HHHHHHHHHCCCeEEEeeccCCHHHH---hcCC-e-EeccCCHHHHHHHHHHHHHhcccccCCCe
Confidence 86541 2233333211111 1233334322 2333 3 44566777788999999876655
Q ss_pred -EEecCChHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccC-c----hhhhhhc
Q 012349 271 -VWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-L----LADTYVT 344 (465)
Q Consensus 271 -v~~s~Di~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~-g----lgDl~~T 344 (465)
+....+. |....+++. .|....++.+++.|+..+++++|.+++++.+. . -|++ +
T Consensus 171 ~v~~~g~~-----------------G~g~~~Kl~-~N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~~~w~~~g~~--~ 230 (478)
T 1pgj_A 171 CVTMNGSG-----------------GAGSCVKMY-HNSGEYAILQIWGEVFDILRAMGLNNDEVAAVLEDWKSKNFL--K 230 (478)
T ss_dssp SCCCCCST-----------------THHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSTT--C
T ss_pred eEEEeCCc-----------------hHHHHHhhH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhccCCCc--C
Confidence 2222221 111112222 23334567899999999999999998776542 1 1111 1
Q ss_pred ccCchhHHHHHHHh----cCCC-hhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHH-HH
Q 012349 345 LLKGRNAWYGQELA----KGRL-TLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKM-LY 418 (465)
Q Consensus 345 ~~~sRN~~~G~~l~----~g~~-~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~-vy 418 (465)
.+..+++. ..+. .|.. .+.+.+.. ++ .| |.+.++++++++|+ + +|+++. ||
T Consensus 231 s~l~~~~~--~~l~~~d~~G~~~ld~i~D~~--~~--kg--tg~~~~~~A~~~Gv--------------~-~Pi~~~av~ 287 (478)
T 1pgj_A 231 SYMLDISI--AAARAKDKDGSYLTEHVMDRI--GS--KG--TGLWSAQEALEIGV--------------P-APSLNMAVV 287 (478)
T ss_dssp BHHHHHHH--HHHHCBCTTSSBGGGGBCCCC--CC--CS--HHHHHHHHHHHHTC--------------C-CHHHHHHHH
T ss_pred chHHHhhc--hhhhcCCCCChhHHHHHHHHh--cC--cc--HHHHHHHHHHHhCC--------------C-ChHHHHHHH
Confidence 11233332 2232 2321 11111100 01 12 55789999999994 7 899998 76
Q ss_pred -HHHhcCCCHHHHHHHHHhcc
Q 012349 419 -KILIMRESPIQAILEALRDE 438 (465)
Q Consensus 419 -~il~~~~~~~~~~~~ll~~~ 438 (465)
++++..+++.+++.++|.-+
T Consensus 288 ~r~ls~~~~~r~~~~~~l~~~ 308 (478)
T 1pgj_A 288 SRQFTMYKTERQANASNAPGI 308 (478)
T ss_dssp HHHHHHTHHHHHHHHHHSTTT
T ss_pred HHHHhCCCCHHHHHHHhcCCC
Confidence 99999999999999988655
No 31
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.74 E-value=5.5e-17 Score=161.55 Aligned_cols=263 Identities=10% Similarity=0.022 Sum_probs=168.0
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
++|||+|||+|+||+++|..|+++ | ++|++|+|+++.++.+ .+. +
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~-G-----~~V~~~dr~~~~~~~~---------~~~---------------g----- 50 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRA-G-----LSTWGADLNPQACANL---------LAE---------------G----- 50 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHH---------HHT---------------T-----
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-C-----CeEEEEECCHHHHHHH---------HHc---------------C-----
Confidence 458999999999999999999998 8 8999999998765531 110 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH---HHHHHhhhccCCCCEEEEee
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF---EEISRYWKERITVPVIISLA 197 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl---~~l~~~l~~~~~~~ivIs~~ 197 (465)
...++++++++++++|+||+|||+. .+++++ +.+.+.+++ +++||.++
T Consensus 51 -------------------------~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~---g~ivv~~s 102 (303)
T 3g0o_A 51 -------------------------ACGAAASAREFAGVVDALVILVVNAAQVRQVLFGEDGVAHLMKP---GSAVMVSS 102 (303)
T ss_dssp -------------------------CSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--CCCGGGSCT---TCEEEECS
T ss_pred -------------------------CccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChhhHHhhCCC---CCEEEecC
Confidence 0112567778889999999999984 788887 778887776 67887776
Q ss_pred ccccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCC-
Q 012349 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD- 276 (465)
Q Consensus 198 kGi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~D- 276 (465)
+. .+.+ ...+.+.+.+ .|.......+..+|..+. .+.. .++++++++..+.++++|+..+.+++...+
T Consensus 103 t~-~~~~-----~~~~~~~~~~-~g~~~~~~pv~g~~~~a~---~g~l-~~~~gg~~~~~~~~~~ll~~~g~~~~~~~~~ 171 (303)
T 3g0o_A 103 TI-SSAD-----AQEIAAALTA-LNLNMLDAPVSGGAVKAA---QGEM-TVMASGSEAAFTRLKPVLDAVASNVYRISDT 171 (303)
T ss_dssp CC-CHHH-----HHHHHHHHHT-TTCEEEECCEESCHHHHH---TTCE-EEEEECCHHHHHHHHHHHHHHEEEEEEEESS
T ss_pred CC-CHHH-----HHHHHHHHHH-cCCeEEeCCCCCChhhhh---cCCe-EEEeCCCHHHHHHHHHHHHHHCCCEEECCCC
Confidence 43 3321 1112222222 121000011233333332 3332 234567788889999999988888776666
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccC-chhhhhhcccCchhHHHHH
Q 012349 277 LVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLLKGRNAWYGQ 355 (465)
Q Consensus 277 i~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~-glgDl~~T~~~sRN~~~G~ 355 (465)
+-..+|.+.+-|.+ ..++..+++|+..++++.|.+++++... +.+ ...+...+|+ +.
T Consensus 172 ~g~a~~~Kl~~N~~------------------~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~--~~~s~~~~~~--~~ 229 (303)
T 3g0o_A 172 PGAGSTVKIIHQLL------------------AGVHIAAAAEAMALAARAGIPLDVMYDVVTHA--AGNSWMFENR--MQ 229 (303)
T ss_dssp TTHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTS--TTCCHHHHHH--HH
T ss_pred CcHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc--ccCCHHHHhh--hH
Confidence 65567766655532 2344577999999999999999887542 111 0111123333 33
Q ss_pred HHhcCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012349 356 ELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 422 (465)
Q Consensus 356 ~l~~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~ 422 (465)
.+.++.-. .+...-......+.+.+++++.|+ + +|+++.+++++.
T Consensus 230 ~~~~~~~~-------~~~~~~~~~kD~~~~~~~a~~~g~--------------~-~p~~~~~~~~~~ 274 (303)
T 3g0o_A 230 HVVDGDYT-------PRSAVDIFVKDLGLVADTAKALRF--------------P-LPLASTALNMFT 274 (303)
T ss_dssp HHHTTCCC-------CSSBHHHHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHH
T ss_pred HHhcCCCC-------CCCchHHHHHHHHHHHHHHHHcCC--------------C-ChHHHHHHHHHH
Confidence 34333210 011123566777789999999995 6 899999999885
No 32
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.73 E-value=5e-17 Score=172.36 Aligned_cols=277 Identities=12% Similarity=0.029 Sum_probs=173.3
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhcC
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (465)
|||+|||+|+||+++|..|+++ | ++|.+|+|++++++.++ ++. .++
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-G-----~~V~v~dr~~~~~~~l~---------~~~------------~~g------- 48 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-G-----FVVCAFNRTVSKVDDFL---------ANE------------AKG------- 48 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSTHHHHHHH---------HTT------------TTT-------
T ss_pred CeEEEEChHHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHHH---------hcc------------ccC-------
Confidence 7899999999999999999998 7 89999999987665421 100 000
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHh---cCCCEEEEecCcc-hHHHHHHHHHHhhhccCCCCEEEEeecc
Q 012349 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV---WDADIVINGLPST-ETKEVFEEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal---~~aDiVIlaVps~-~l~~vl~~l~~~l~~~~~~~ivIs~~kG 199 (465)
.++..++++++++ +++|+||++||+. .++++++++.+++++ +++||++++|
T Consensus 49 ----------------------~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~vl~~l~~~l~~---g~iII~~s~~ 103 (482)
T 2pgd_A 49 ----------------------TKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDNFIEKLVPLLDI---GDIIIDGGNS 103 (482)
T ss_dssp ----------------------SSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHHHHHHHHHHCCT---TCEEEECSCC
T ss_pred ----------------------CCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHHHHHHHHhhcCC---CCEEEECCCC
Confidence 0345677888876 4899999999995 899999999998876 6889999999
Q ss_pred ccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCChHH
Q 012349 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVT 279 (465)
Q Consensus 200 i~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~g 279 (465)
....+ ..+.+.+.+ .| +.++.+|....+...+..+.++.+++++..+.++++|+..+.++. +|..+
T Consensus 104 ~~~~~------~~l~~~l~~-~g-----~~~v~~pv~g~~~~a~~g~~i~~gg~~e~~~~v~~ll~~~g~~v~--d~~~~ 169 (482)
T 2pgd_A 104 EYRDT------MRRCRDLKD-KG-----ILFVGSGVSGGEDGARYGPSLMPGGNKEAWPHIKAIFQGIAAKVG--TGEPC 169 (482)
T ss_dssp CHHHH------HHHHHHHHH-TT-----CEEEEEEEESHHHHHHHCCEEEEEECTTTHHHHHHHHHHHSCBCT--TSCBS
T ss_pred CHHHH------HHHHHHHHH-cC-----CeEeCCCCCCChhhhccCCeEEeCCCHHHHHHHHHHHHHhhhhcc--CCCcc
Confidence 86542 111232322 12 223445554443332222234556677788999999998887751 22222
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHh-CCCcchhccC-c---hhhhhhcccCchhHHHH
Q 012349 280 HEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLL-AEEPEKLAGP-L---LADTYVTLLKGRNAWYG 354 (465)
Q Consensus 280 ve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~-G~~~~t~~g~-g---lgDl~~T~~~sRN~~~G 354 (465)
+.+.+. .|....+++. .|....++.+++.|+..++++. |.+++++.++ + .|+ .+++..||+.
T Consensus 170 ~~~~g~--------~g~g~~~Kl~-~N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~~~~w~~g~--~~S~l~~~~~-- 236 (482)
T 2pgd_A 170 CDWVGD--------DGAGHFVKMV-HNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFEEWNKTE--LDSFLIEITA-- 236 (482)
T ss_dssp CCCCEE--------TTHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTT--TCBHHHHHHH--
T ss_pred eEEECC--------CcHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHhcCCC--cCchHHHHHh--
Confidence 222111 1222223332 3344467789999999999998 9998876542 1 122 2223445553
Q ss_pred HHHhcCC-Ch-hhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHH-HHHHHHhcC
Q 012349 355 QELAKGR-LT-LDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILK-MLYKILIMR 424 (465)
Q Consensus 355 ~~l~~g~-~~-~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~-~vy~il~~~ 424 (465)
..+.++. +. ..+.. +. .......+.+.++++++++|+ + +|++. .+|+.+...
T Consensus 237 ~~l~~~d~~~~~~ld~-i~--d~~~~k~t~~~~~~~A~~~Gv--------------~-~P~i~~av~~~~~s~ 291 (482)
T 2pgd_A 237 SILKFQDADGKHLLPK-IR--DSAGQKGTGKWTAISALEYGV--------------P-VTLIGEAVFARCLSS 291 (482)
T ss_dssp HHHHCBCTTSSBSGGG-SC--CCCCCCSHHHHHHHHHHHHTC--------------C-CHHHHHHHHHHHHHH
T ss_pred HHhhccCCCCCeeecc-cc--cccccccHHHHHHHHHHHcCC--------------C-cchHHHHHHHHhhhh
Confidence 2333321 10 01111 10 122334566788999999994 7 89995 799988643
No 33
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.72 E-value=1e-16 Score=157.91 Aligned_cols=259 Identities=12% Similarity=0.063 Sum_probs=166.3
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
+||||+|||+|+||+++|..|++. | ++|++|+ +++.++.+ .+.
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~-~~~~~~~~---------~~~--------------------- 44 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGSPMAINLARA-G-----HQLHVTT-IGPVADEL---------LSL--------------------- 44 (295)
T ss_dssp --CEEEECCCSTTHHHHHHHHHHT-T-----CEEEECC-SSCCCHHH---------HTT---------------------
T ss_pred CCCEEEEEccCHHHHHHHHHHHhC-C-----CEEEEEc-CHHHHHHH---------HHc---------------------
Confidence 458999999999999999999988 7 8999999 77654431 100
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcch-HHHHHH---HHHHhhhccCCCCEEEEee
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVFE---EISRYWKERITVPVIISLA 197 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~-l~~vl~---~l~~~l~~~~~~~ivIs~~ 197 (465)
++..++++++++.++|+||+|||... ++.++. ++.+.+++ +++||+++
T Consensus 45 -------------------------g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~---~~~vv~~s 96 (295)
T 1yb4_A 45 -------------------------GAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGCAKTSLQ---GKTIVDMS 96 (295)
T ss_dssp -------------------------TCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSSTTSCCT---TEEEEECS
T ss_pred -------------------------CCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhHhhcCCC---CCEEEECC
Confidence 12234567788889999999997665 888887 77777765 67888898
Q ss_pred ccccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhh--hhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecC
Q 012349 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE--IYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNG 275 (465)
Q Consensus 198 kGi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~e--v~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~ 275 (465)
+|.... .+.+.+.++.. .+.++..|..... ...+..+ ++++++++..+.++++|+..+++++...
T Consensus 97 ~~~~~~----------~~~l~~~~~~~--g~~~~~~p~~~~~~~a~~g~~~-~~~~~~~~~~~~~~~ll~~~g~~~~~~~ 163 (295)
T 1yb4_A 97 SISPIE----------TKRFAQRVNEM--GADYLDAPVSGGEIGAREGTLS-IMVGGEQKVFDRVKPLFDILGKNITLVG 163 (295)
T ss_dssp CCCHHH----------HHHHHHHHHTT--TEEEEECCEESHHHHHHHTCEE-EEEESCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCHHH----------HHHHHHHHHHc--CCeEEEccCCCCHHHHHcCCeE-EEECCCHHHHHHHHHHHHHhcCCEEEeC
Confidence 874322 12343433221 1222333333211 1134433 3456677788999999999999888877
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccC-chhhhhhcccCchhHHHH
Q 012349 276 DLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLLKGRNAWYG 354 (465)
Q Consensus 276 Di~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~-glgDl~~T~~~sRN~~~G 354 (465)
|.-...|.+.+-|.+ ..++..++.|+..++++.|.+++++... ..++ .++...+| ..+
T Consensus 164 ~~~~~~~~Kl~~n~~------------------~~~~~~~~~E~~~l~~~~G~~~~~~~~~~~~~~--~~s~~~~~-~~~ 222 (295)
T 1yb4_A 164 GNGDGQTCKVANQII------------------VALNIEAVSEALVFASKAGADPVRVRQALMGGF--ASSRILEV-HGE 222 (295)
T ss_dssp STTHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHTTCCHHHHHHHHTSSS--SCBHHHHH-HHH
T ss_pred CCCHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCC--CCCHHHHH-hhH
Confidence 766666777666642 2456678999999999999988776542 1111 11111222 222
Q ss_pred HHHhcCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012349 355 QELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 422 (465)
Q Consensus 355 ~~l~~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~ 422 (465)
..+.+..+ .+..+-.....+..+.++++++|+ + +|+++++++++.
T Consensus 223 ~~~~~~~~--------~g~~~~~~~kd~~~~~~~a~~~g~--------------~-~p~~~~~~~~~~ 267 (295)
T 1yb4_A 223 RMINRTFE--------PGFKIALHQKDLNLALQSAKALAL--------------N-LPNTATCQELFN 267 (295)
T ss_dssp HHHTTCCC--------CSSBHHHHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHH
T ss_pred HHhcCCCC--------CCCchHHHHHHHHHHHHHHHHcCC--------------C-ChHHHHHHHHHH
Confidence 22222111 111122334566789999999995 6 899999999886
No 34
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.72 E-value=2.5e-16 Score=158.21 Aligned_cols=276 Identities=12% Similarity=0.110 Sum_probs=164.9
Q ss_pred chhHHHhHHHhhhhc-CCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchh
Q 012349 23 GSLEERLDELRRLMG-KAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSRE 101 (465)
Q Consensus 23 ~~~~~~~~~~~~~~~-~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~ 101 (465)
+....+-.-+.+.|. +....+|||+|||+|.||+++|..|+++ | ++|++|+|+++.++++ .+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~a~~l~~~-G-----~~V~~~dr~~~~~~~l---------~~-- 72 (320)
T 4dll_A 10 GVDLGTENLYFQSMTVESDPYARKITFLGTGSMGLPMARRLCEA-G-----YALQVWNRTPARAASL---------AA-- 72 (320)
T ss_dssp -------------------CCCSEEEEECCTTTHHHHHHHHHHT-T-----CEEEEECSCHHHHHHH---------HT--
T ss_pred cccccccccceechhhccccCCCEEEEECccHHHHHHHHHHHhC-C-----CeEEEEcCCHHHHHHH---------HH--
Confidence 444444443444433 2344568999999999999999999998 8 8999999998755431 10
Q ss_pred hhHHhhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc-chHHHHHH--
Q 012349 102 DVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVFE-- 178 (465)
Q Consensus 102 ~~~~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps-~~l~~vl~-- 178 (465)
.++..+++++++++++|+||++||. ..+++++.
T Consensus 73 --------------------------------------------~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~ 108 (320)
T 4dll_A 73 --------------------------------------------LGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQ 108 (320)
T ss_dssp --------------------------------------------TTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTT
T ss_pred --------------------------------------------CCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcch
Confidence 0245678888999999999999995 68888887
Q ss_pred HHHHhhhccCCCCEEEEeeccccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhh--ccCceEEEEeCChhH
Q 012349 179 EISRYWKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIY--NKEYANARICGAEKW 256 (465)
Q Consensus 179 ~l~~~l~~~~~~~ivIs~~kGi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~--~g~~t~~~~~~~~~~ 256 (465)
.+.+.+.+ +++||.++.+- +.+ ...+.+.+.+ .| +.++..|-+..+.. .+..+ ++++++++.
T Consensus 109 ~~~~~l~~---~~~vi~~st~~-~~~-----~~~~~~~~~~-~g-----~~~~~~pv~g~~~~a~~g~l~-i~~gg~~~~ 172 (320)
T 4dll_A 109 GVAAAMKP---GSLFLDMASIT-PRE-----ARDHAARLGA-LG-----IAHLDTPVSGGTVGAEQGTLV-IMAGGKPAD 172 (320)
T ss_dssp CHHHHCCT---TCEEEECSCCC-HHH-----HHHHHHHHHH-TT-----CEEEECCEECHHHHHHHTCEE-EEEESCHHH
T ss_pred hHHhhCCC---CCEEEecCCCC-HHH-----HHHHHHHHHH-cC-----CEEEeCCCcCCHhHHhcCCee-EEeCCCHHH
Confidence 77777766 67787776543 321 1112222222 12 12334444433221 34332 456777888
Q ss_pred HHHHHHHHcCCCCeEEecCChHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccC
Q 012349 257 RKPLAKFLRRPHFTVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP 336 (465)
Q Consensus 257 ~~~l~~ll~~~g~~v~~s~Di~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~ 336 (465)
.+.++.+|+.. .+++...+.-..++.+.+-|.+ ......+++|+..++++.|.+++++..
T Consensus 173 ~~~~~~ll~~~-~~~~~~g~~g~a~~~Kl~~N~~------------------~~~~~~~~~Ea~~l~~~~G~d~~~~~~- 232 (320)
T 4dll_A 173 FERSLPLLKVF-GRATHVGPHGSGQLTKLANQMI------------------VGITIGAVAEALLFATKGGADMAKVKE- 232 (320)
T ss_dssp HHHHHHHHHHH-EEEEEEESTTHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHTSCCHHHHHH-
T ss_pred HHHHHHHHHhc-CCEEEeCCccHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHcCCCHHHHHH-
Confidence 88899999877 6777666654455555444421 134456799999999999999887754
Q ss_pred chhhhhhccc-CchhH-HHHHHHhcCC-ChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcH
Q 012349 337 LLADTYVTLL-KGRNA-WYGQELAKGR-LTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPI 413 (465)
Q Consensus 337 glgDl~~T~~-~sRN~-~~G~~l~~g~-~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi 413 (465)
++.... .|+-. ..+..+-++. .. +-..--.....+.+.+++++.|+ + +|+
T Consensus 233 ----~~~~~~~~s~~~~~~~~~~l~~~~~~--------gf~~~~~~KDl~~~~~~a~~~g~--------------~-~p~ 285 (320)
T 4dll_A 233 ----AITGGFADSRVLQLHGQRMVERDFAP--------RARLSIQLKDMRNALATAQEIGF--------------D-API 285 (320)
T ss_dssp ----HHTTSTTCBHHHHTHHHHHHTTCCCC--------SSBHHHHHHHHHHHHHHHHHTTC--------------C-CHH
T ss_pred ----HHHcccccCHHHHHhhhhhccCCCCC--------cccHHHHHHHHHHHHHHHHHcCC--------------C-ChH
Confidence 111111 11110 1222332221 10 00112345566689999999995 6 899
Q ss_pred HHHHHHHHh
Q 012349 414 LKMLYKILI 422 (465)
Q Consensus 414 ~~~vy~il~ 422 (465)
++.+.+++.
T Consensus 286 ~~~~~~~~~ 294 (320)
T 4dll_A 286 TGLFEQLYA 294 (320)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999888875
No 35
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.72 E-value=8e-17 Score=158.84 Aligned_cols=252 Identities=14% Similarity=0.083 Sum_probs=159.9
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhcC
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (465)
|||+|||+|+||+++|..|+++ | ++|++|+|+++.++.+ .+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~-g-----~~V~~~~~~~~~~~~~---------~~------------------------ 41 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH-G-----YPLIIYDVFPDACKEF---------QD------------------------ 41 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT-T-----CCEEEECSSTHHHHHH---------HT------------------------
T ss_pred CeEEEEeccHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHH---------HH------------------------
Confidence 6899999999999999999988 7 8999999998654431 10
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC-cchHHHHHHHHH---HhhhccCCCCEEEEeecc
Q 012349 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVFEEIS---RYWKERITVPVIISLAKG 199 (465)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVp-s~~l~~vl~~l~---~~l~~~~~~~ivIs~~kG 199 (465)
..+.+++++++++.++|+||+||| ++.+++++.++. +.+++ ++++|+ ++|
T Consensus 42 ----------------------~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~~~~l~~---~~~vv~-~s~ 95 (296)
T 2gf2_A 42 ----------------------AGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKK---GSLLID-SST 95 (296)
T ss_dssp ----------------------TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSGGGTCCT---TCEEEE-CSC
T ss_pred ----------------------cCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhHHhcCCC---CCEEEE-CCC
Confidence 023456778888889999999995 668899888754 34454 678888 889
Q ss_pred ccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCChHH
Q 012349 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVT 279 (465)
Q Consensus 200 i~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~g 279 (465)
+.+++ ...+.+.+.+ .+.......+..||.++. .+.. .+..+.+++..+.++++|+..|++++...+.-.
T Consensus 96 ~~~~~-----~~~~~~~~~~-~g~~~~~~p~~~g~~~a~---~~~~-~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~~g~ 165 (296)
T 2gf2_A 96 IDPAV-----SKELAKEVEK-MGAVFMDAPVSGGVGAAR---SGNL-TFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGT 165 (296)
T ss_dssp CCHHH-----HHHHHHHHHH-TTCEEEECCEESHHHHHH---HTCE-EEEEESCGGGHHHHHHHHTTTEEEEEEEESTTH
T ss_pred CCHHH-----HHHHHHHHHH-cCCEEEEcCCCCChhHHh---cCcE-EEEeCCCHHHHHHHHHHHHHHcCCeEEeCCccH
Confidence 87752 1112222322 121000001233333222 2332 234566778889999999999998876554211
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccC-chhh---hhhccc---------
Q 012349 280 HEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLAD---TYVTLL--------- 346 (465)
Q Consensus 280 ve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~-glgD---l~~T~~--------- 346 (465)
..+.+ +. +|....++..++.|+..+++++|.+++++..+ ..++ ..+++.
T Consensus 166 ~~~~k-----------------l~-~n~~~~~~~~~~~Ea~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 227 (296)
T 2gf2_A 166 GQAAK-----------------IC-NNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDG 227 (296)
T ss_dssp HHHHH-----------------HH-HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCBHHHHHSCSSTTTCSS
T ss_pred HHHHH-----------------HH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhCcccCHHHHhcCCccccccc
Confidence 12221 21 23333566788999999999999998776542 1111 111110
Q ss_pred --CchhHHHHHHHhcCCChhhHhHhhcCCcccc-hHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012349 347 --KGRNAWYGQELAKGRLTLDLGDSIKGKGMIQ-GISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 422 (465)
Q Consensus 347 --~sRN~~~G~~l~~g~~~~~~~~~~~~~~~vE-G~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~ 422 (465)
.+|++. .+..++ ....++.++++++++|+ + +|+++++|+++.
T Consensus 228 s~~~~~~~-------------------~g~~~~~~~kd~~~~~~~a~~~gv--------------~-~p~~~~~~~~~~ 272 (296)
T 2gf2_A 228 VPSANNYQ-------------------GGFGTTLMAKDLGLAQDSATSTKS--------------P-ILLGSLAHQIYR 272 (296)
T ss_dssp SGGGGTTC-------------------SSSBHHHHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHH
T ss_pred chhccCCC-------------------CCCchHHHHHHHHHHHHHHHHcCC--------------C-ChHHHHHHHHHH
Confidence 112211 111222 35567789999999995 6 899999999886
No 36
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.72 E-value=7e-16 Score=155.00 Aligned_cols=252 Identities=11% Similarity=0.013 Sum_probs=166.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
+|||+|||+|.||+++|..|+++ |. ++|++|+|+++..++.. +..+. +..
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~-G~----~~V~~~dr~~~~~~~~~-----~~~~~--------------~~~------ 73 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGR-NA----ARLAAYDLRFNDPAASG-----ALRAR--------------AAE------ 73 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TC----SEEEEECGGGGCTTTHH-----HHHHH--------------HHH------
T ss_pred CCeEEEECccHHHHHHHHHHHHc-CC----CeEEEEeCCCccccchH-----HHHHH--------------HHH------
Confidence 48999999999999999999988 51 78999999974322210 00100 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEec-CHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVT-NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~-dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
..+ ++ ++.++++++|+||+|||++...+.++.+.+.+++ +++||+++ ++.
T Consensus 74 -----------------------~g~--~~~s~~e~~~~aDvVi~avp~~~~~~~~~~i~~~l~~---~~ivv~~s-t~~ 124 (317)
T 4ezb_A 74 -----------------------LGV--EPLDDVAGIACADVVLSLVVGAATKAVAASAAPHLSD---EAVFIDLN-SVG 124 (317)
T ss_dssp -----------------------TTC--EEESSGGGGGGCSEEEECCCGGGHHHHHHHHGGGCCT---TCEEEECC-SCC
T ss_pred -----------------------CCC--CCCCHHHHHhcCCEEEEecCCHHHHHHHHHHHhhcCC---CCEEEECC-CCC
Confidence 023 34 6778889999999999999988888999888876 67888776 555
Q ss_pred ccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCC-hHHH
Q 012349 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD-LVTH 280 (465)
Q Consensus 202 ~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~D-i~gv 280 (465)
+.+ ...+.+.+.+ .|.... -+-++||..+. .+.++ ++++++++ +.++.+|+..+.+++...+ +-..
T Consensus 125 p~~-----~~~~~~~l~~-~g~~~~-d~pv~g~~~a~---~g~l~-i~vgg~~~--~~~~~ll~~~g~~v~~~g~~~g~a 191 (317)
T 4ezb_A 125 PDT-----KALAAGAIAT-GKGSFV-EGAVMARVPPY---AEKVP-ILVAGRRA--VEVAERLNALGMNLEAVGETPGQA 191 (317)
T ss_dssp HHH-----HHHHHHHHHT-SSCEEE-EEEECSCSTTT---GGGSE-EEEESTTH--HHHHHHHHTTTCEEEEEESSTTHH
T ss_pred HHH-----HHHHHHHHHH-cCCeEE-eccCCCCchhh---cCCEE-EEEeCChH--HHHHHHHHHhCCCeEEeCCCcCHH
Confidence 542 2223333332 121101 13467886543 34444 44555544 8899999999988877776 6667
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccC--ch-h-hhhhcc--cCchhHHHH
Q 012349 281 EVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP--LL-A-DTYVTL--LKGRNAWYG 354 (465)
Q Consensus 281 e~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~--gl-g-Dl~~T~--~~sRN~~~G 354 (465)
++.|.+-|.+. .....+++|+..+++++|.+++.+..+ +. + ++...+ ..+|++..|
T Consensus 192 ~~~Kl~~N~~~------------------~~~~~~~~E~~~la~~~Gid~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g 253 (317)
T 4ezb_A 192 SSLKMIRSVMI------------------KGVEALLIEALSSAERAGVTERILDSVQETFPGLDWRDVADYYLSRTFEHG 253 (317)
T ss_dssp HHHHHHHHHHH------------------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH------------------HHHHHHHHHHHHHHHHcCCCHHHHHHHHhcCccccHHHhhhhhhcCCCCCC
Confidence 77766666422 344577899999999999998765442 11 1 222222 245555555
Q ss_pred HHHhcCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHH
Q 012349 355 QELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKI 420 (465)
Q Consensus 355 ~~l~~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~i 420 (465)
..+ ....+.+.+++++.|+ + +|+++.++++
T Consensus 254 ~~~---------------------~KDl~~~~~~a~~~g~--------------~-~pl~~~~~~~ 283 (317)
T 4ezb_A 254 ARR---------------------VTEMTEAAETIESFGL--------------N-APMSRAACET 283 (317)
T ss_dssp HHH---------------------HHHHHHHHHHHHTTTC--------------C-CHHHHHHHHH
T ss_pred cch---------------------HHHHHHHHHHHHHcCC--------------C-ChHHHHHHHH
Confidence 443 2334578899999994 6 7999999988
No 37
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.72 E-value=1.6e-16 Score=157.15 Aligned_cols=252 Identities=13% Similarity=0.098 Sum_probs=165.0
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
++|||+|||+|+||++++..|++. | ++|++|+|+++.++.+ .+
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~~~~~~~~~~---------~~---------------------- 45 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKE-G-----VTVYAFDLMEANVAAV---------VA---------------------- 45 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHT-T-----CEEEEECSSHHHHHHH---------HT----------------------
T ss_pred CCCEEEEECccHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHH---------HH----------------------
Confidence 358999999999999999999988 7 8999999987654421 10
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC-cchHHHHHH---HHHHhhhccCCCCEEEEee
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVFE---EISRYWKERITVPVIISLA 197 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVp-s~~l~~vl~---~l~~~l~~~~~~~ivIs~~ 197 (465)
.++..++++++++.++|+||+||| +..++.++. ++.+.+++ +++||+++
T Consensus 46 ------------------------~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~---~~~vv~~~ 98 (301)
T 3cky_A 46 ------------------------QGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGVLSACKA---GTVIVDMS 98 (301)
T ss_dssp ------------------------TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHSCT---TCEEEECC
T ss_pred ------------------------CCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchHhhcCCC---CCEEEECC
Confidence 023345677788889999999997 566888885 78887776 68999999
Q ss_pred ccccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhh--hccCceEEEEeCChhHHHHHHHHHcCCCCeEEecC
Q 012349 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEI--YNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNG 275 (465)
Q Consensus 198 kGi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev--~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~ 275 (465)
+|..... +.+.+.++... +.++..|....+. ..+..+ +.++++++..+.++++|+..+++++...
T Consensus 99 ~~~~~~~----------~~l~~~~~~~g--~~~~~~p~~~~~~~a~~g~~~-~~~~g~~~~~~~v~~ll~~~g~~~~~~~ 165 (301)
T 3cky_A 99 SVSPSST----------LKMAKVAAEKG--IDYVDAPVSGGTKGAEAGTLT-IMVGASEAVFEKIQPVLSVIGKDIYHVG 165 (301)
T ss_dssp CCCHHHH----------HHHHHHHHHTT--CEEEECCEESHHHHHHHTCEE-EEEESCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCHHHH----------HHHHHHHHHcC--CeEEEccCCCCHHHHHcCCeE-EEECCCHHHHHHHHHHHHHhcCCEEEeC
Confidence 8874221 22333332111 1122334332221 124333 3345677788999999999999888776
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccC---c-hhhhh--hcc---c
Q 012349 276 DLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP---L-LADTY--VTL---L 346 (465)
Q Consensus 276 Di~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~---g-lgDl~--~T~---~ 346 (465)
+.-...|.+.+-|. ...++..++.|+..++++.|.+++++... + .++.. .++ .
T Consensus 166 ~~g~~~~~Kl~~N~------------------~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (301)
T 3cky_A 166 DTGAGDAVKIVNNL------------------LLGCNMASLAEALVLGVKCGLKPETMQEIIGKSSGRSYAMEAKMEKFI 227 (301)
T ss_dssp STTHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCBHHHHHHCCCCC
T ss_pred CCCHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHhhhhhh
Confidence 65555666665552 22456788999999999999988766431 1 11111 011 1
Q ss_pred CchhHHHHHHHhcCCChhhHhHhhcCCcccch-HHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012349 347 KGRNAWYGQELAKGRLTLDLGDSIKGKGMIQG-ISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 422 (465)
Q Consensus 347 ~sRN~~~G~~l~~g~~~~~~~~~~~~~~~vEG-~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~ 422 (465)
.+||+.. +.+++. ......++++++++|+ + +|+++++|+++.
T Consensus 228 l~~~~~~-------------------g~~~~~~~kd~~~~~~~a~~~gv--------------~-~p~~~~~~~~~~ 270 (301)
T 3cky_A 228 MSGDFAG-------------------GFAMDLQHKDLGLALEAGKEGNV--------------P-LPMTAMATQIFE 270 (301)
T ss_dssp CTCCCSS-------------------SSBHHHHHHHHHHHHHHHHHHTC--------------C-CHHHHHHHHHHH
T ss_pred hcCCCCC-------------------CccHHHHHHHHHHHHHHHHHhCC--------------C-ChHHHHHHHHHH
Confidence 1222211 112222 2344688999999995 6 899999999886
No 38
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.71 E-value=2.1e-16 Score=156.79 Aligned_cols=262 Identities=15% Similarity=0.085 Sum_probs=166.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
.||||+|||+|+||+++|..|+++ | ++|++|+|+++.++.+ .+
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~-G-----~~V~~~d~~~~~~~~~---------~~---------------------- 44 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKA-G-----YLLNVFDLVQSAVDGL---------VA---------------------- 44 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHT-T-----CEEEEECSSHHHHHHH---------HH----------------------
T ss_pred CCCEEEEEeecHHHHHHHHHHHhC-C-----CeEEEEcCCHHHHHHH---------HH----------------------
Confidence 368999999999999999999998 7 8999999998655431 10
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC-cchHHHHHH---HHHHhhhccCCCCEEEEee
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVFE---EISRYWKERITVPVIISLA 197 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVp-s~~l~~vl~---~l~~~l~~~~~~~ivIs~~ 197 (465)
.++..+++++++++++|+||+||| +..+++++. ++.+.+.+ +++||+++
T Consensus 45 ------------------------~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~---~~~vi~~s 97 (302)
T 2h78_A 45 ------------------------AGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP---GTLVLECS 97 (302)
T ss_dssp ------------------------TTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCGGGSSCS---SCEEEECS
T ss_pred ------------------------CCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhHHhcCCC---CcEEEECC
Confidence 024456788888999999999998 567899988 78887766 67788776
Q ss_pred ccccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhh--ccCceEEEEeCChhHHHHHHHHHcCCCCeEEecC
Q 012349 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIY--NKEYANARICGAEKWRKPLAKFLRRPHFTVWDNG 275 (465)
Q Consensus 198 kGi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~--~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~ 275 (465)
.+-... .+.+.+.+...... ++..|.+..... .+..+ ...+++++..+.++++|+..+.+++...
T Consensus 98 t~~~~~----------~~~l~~~~~~~g~~--~~~~pv~~~~~~~~~g~l~-~~~~g~~~~~~~~~~ll~~~g~~~~~~~ 164 (302)
T 2h78_A 98 TIAPTS----------ARKIHAAARERGLA--MLDAPVSGGTAGAAAGTLT-FMVGGDAEALEKARPLFEAMGRNIFHAG 164 (302)
T ss_dssp CCCHHH----------HHHHHHHHHHTTCC--EEECCEESCHHHHHHTCEE-EEEESCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCHHH----------HHHHHHHHHHcCCE--EEEEEccCChhhHhcCCce-EEeCCCHHHHHHHHHHHHHhCCCeEEcC
Confidence 443221 12233333211111 233454443322 23322 3456678888999999999898888777
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccCchhhhhhcccCchhHHHHH
Q 012349 276 DLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQ 355 (465)
Q Consensus 276 Di~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~glgDl~~T~~~sRN~~~G~ 355 (465)
+....+|.+.+-|.+. ..+..+++|+..++++.|.+++++.. ++.... .+++.+.
T Consensus 165 ~~~~~~~~Kl~~n~~~------------------~~~~~~~~Ea~~l~~~~G~~~~~~~~-----~~~~~~-~~s~~~~- 219 (302)
T 2h78_A 165 PDGAGQVAKVCNNQLL------------------AVLMIGTAEAMALGVANGLEAKVLAE-----IMRRSS-GGNWALE- 219 (302)
T ss_dssp STTHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHTTCCHHHHHH-----HHHTST-TCCHHHH-
T ss_pred CccHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHcCCCHHHHHH-----HHHcCC-CCCHHHH-
Confidence 7666677777666422 23456789999999999998877643 222111 1111111
Q ss_pred HHhcC-----CChhhHhHhhcCCccc-chHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012349 356 ELAKG-----RLTLDLGDSIKGKGMI-QGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 422 (465)
Q Consensus 356 ~l~~g-----~~~~~~~~~~~~~~~v-EG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~ 422 (465)
....+ ... .......+-.+ -.....+.+.+++++.|+ + +|+++.+++++.
T Consensus 220 ~~~~~~g~~~~~~--~~~~~~~g~~~~~~~kD~~~~~~~a~~~g~--------------~-~p~~~~~~~~~~ 275 (302)
T 2h78_A 220 VYNPWPGVMENAP--ASRDYSGGFMAQLMAKDLGLAQEAAQASAS--------------S-TPMGSLALSLYR 275 (302)
T ss_dssp HCCCSTTTSTTSG--GGGTTCSSSBHHHHHHHHHHHHHHHHHHTC--------------C-CHHHHHHHHHHH
T ss_pred HhCCCcccccccc--cCCCCCCCCcHHHHHHHHHHHHHHHHHcCC--------------C-ChHHHHHHHHHH
Confidence 11110 000 01111111112 223446678999999994 6 899999999875
No 39
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.71 E-value=2.8e-16 Score=166.18 Aligned_cols=224 Identities=11% Similarity=0.052 Sum_probs=160.3
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCch----hhhhhhhhhhHHHHhchhhhHHhhhhccc--cc
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGR----SVDRATAEHLFEVINSREDVLRRLIRRCA--YL 114 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~-~V~l~~r~~~----~~~~i~~~~l~~~i~~~~~~~~~~~~n~~--~l 114 (465)
.+|||+|||+|+||+.+|..|+++.| + +|++|+++++ +++.+ +++. ++. |.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G-----~~~V~~~D~~~~~~~~kv~~l---------~~g~--------~~i~~~e 74 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPC-----FEKVLGFQRNSKSSGYKIEML---------NRGE--------SPLKGEE 74 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTT-----CCEEEEECCCCTTTTTHHHHH---------TTTC--------CCSSCCG
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCC-----CCeEEEEECChhHhHHHHHHH---------HhcC--------CCccccC
Confidence 45899999999999999999998624 8 9999999998 77653 3321 233 44
Q ss_pred chhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcch------------HHHHHHHHHH
Q 012349 115 KYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE------------TKEVFEEISR 182 (465)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~------------l~~vl~~l~~ 182 (465)
+++. +++.++.. ..++.+|+| .+++.+||+||+|||+.. +.++++.|.+
T Consensus 75 ~gl~-----------~l~~~~~~-------~g~l~~ttd-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~ 135 (478)
T 3g79_A 75 PGLE-----------ELIGKVVK-------AGKFECTPD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGK 135 (478)
T ss_dssp GGHH-----------HHHHHHHH-------TTCEEEESC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHH
T ss_pred CCHH-----------HHHHhhcc-------cCCeEEeCc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHh
Confidence 4432 12211000 025788898 578899999999999763 7788899999
Q ss_pred hhhccCCCCEEEEeeccccccccccccCCCHHHH-HHhHhCCC-CccEEEEeCCchhhhhhc----cCceEEEEeCChhH
Q 012349 183 YWKERITVPVIISLAKGVEAELEAVPRIITPTQM-INRATGVP-IENILYLGGPNIASEIYN----KEYANARICGAEKW 256 (465)
Q Consensus 183 ~l~~~~~~~ivIs~~kGi~~~~~~~~~~~~~se~-I~e~lg~~-~~~i~vlsGP~~a~ev~~----g~~t~~~~~~~~~~ 256 (465)
++++ +++|| ..+++++. +.+.+.+. +++..|.. ...+.++++|.++.+... ..+..++.+.+++.
T Consensus 136 ~l~~---g~iVV-~~STv~pg-----tt~~v~~~ile~~~g~~~~~d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G~~~~~ 206 (478)
T 3g79_A 136 YLKP---GMLVV-LESTITPG-----TTEGMAKQILEEESGLKAGEDFALAHAPERVMVGRLLKNIREHDRIVGGIDEAS 206 (478)
T ss_dssp HCCT---TCEEE-ECSCCCTT-----TTTTHHHHHHHHHHCCCBTTTBEEEECCCCCCTTSHHHHHHHSCEEEEESSHHH
T ss_pred hcCC---CcEEE-EeCCCChH-----HHHHHHHHHHHHhcCCCcCCceeEEeCCccCCccchhhhhcCCcEEEEeCCHHH
Confidence 8886 56655 55588887 45667653 43555532 134678999999887553 12344566778888
Q ss_pred HHHHHHHHcCC-CCeEEecCChHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchh
Q 012349 257 RKPLAKFLRRP-HFTVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKL 333 (465)
Q Consensus 257 ~~~l~~ll~~~-g~~v~~s~Di~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~ 333 (465)
.+.++.+|+.. +..++...|+...|+.|.+.|.+- +.-...++|+..+|+++|.++..+
T Consensus 207 ~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~~~------------------a~~Ia~~nE~~~l~e~~GiD~~~v 266 (478)
T 3g79_A 207 TKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTFR------------------DLQIAAINQLALYCEAMGINVYDV 266 (478)
T ss_dssp HHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHhhhccCCeEEeCCHHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHcCCCHHHH
Confidence 89999999987 677888899999999998888521 122356889999999999877654
No 40
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.70 E-value=3.9e-16 Score=153.06 Aligned_cols=256 Identities=15% Similarity=0.135 Sum_probs=161.1
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
||||+|||+|+||+++|..|++ | ++|++|+|+++.++.+. +. +
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~--g-----~~V~~~~~~~~~~~~~~---------~~---------------g------ 43 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR--R-----FPTLVWNRTFEKALRHQ---------EE---------------F------ 43 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT--T-----SCEEEECSSTHHHHHHH---------HH---------------H------
T ss_pred CCeEEEEcccHHHHHHHHHHhC--C-----CeEEEEeCCHHHHHHHH---------HC---------------C------
Confidence 4799999999999999999986 5 89999999987554311 10 1
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcch-HHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~-l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
+..++ +.+++.++|+||+|||+.. ++++++++.+.+++ ++++++++++-.
T Consensus 44 -------------------------~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~~~l~~~l~~---~~~vv~~s~~~~ 94 (289)
T 2cvz_A 44 -------------------------GSEAV-PLERVAEARVIFTCLPTTREVYEVAEALYPYLRE---GTYWVDATSGEP 94 (289)
T ss_dssp -------------------------CCEEC-CGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCCT---TEEEEECSCCCH
T ss_pred -------------------------CcccC-HHHHHhCCCEEEEeCCChHHHHHHHHHHHhhCCC---CCEEEECCCCCH
Confidence 11122 4566788999999999775 89999988887776 678887776532
Q ss_pred ccccccccCCCHHHHHHhHhCCCCccEEEEeCCchh--hhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCChHH
Q 012349 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIA--SEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVT 279 (465)
Q Consensus 202 ~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a--~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~g 279 (465)
.. .+.+.+.++.. .+.++..|... .....+..+ +..+++++..+.++++| ..+++++..+|...
T Consensus 95 ~~----------~~~l~~~~~~~--g~~~~~~p~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~ll-~~g~~~~~~~~~~~ 160 (289)
T 2cvz_A 95 EA----------SRRLAERLREK--GVTYLDAPVSGGTSGAEAGTLT-VMLGGPEEAVERVRPFL-AYAKKVVHVGPVGA 160 (289)
T ss_dssp HH----------HHHHHHHHHTT--TEEEEECCEESHHHHHHHTCEE-EEEESCHHHHHHHGGGC-TTEEEEEEEESTTH
T ss_pred HH----------HHHHHHHHHHc--CCEEEEecCCCChhHHhhCCeE-EEECCCHHHHHHHHHHH-hhcCCeEEcCCCcH
Confidence 21 12344444321 12233345432 222244433 33466777889999999 99998877777655
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccC-chhhhhhcccCchhHHHHHHHh
Q 012349 280 HEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLLKGRNAWYGQELA 358 (465)
Q Consensus 280 ve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~-glgDl~~T~~~sRN~~~G~~l~ 358 (465)
..|.+..-|. ...++..++.|+..++++.|.+++++... ..++.- +...+++..+..+.
T Consensus 161 ~~~~k~~~n~------------------~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~--s~~~~~~~~~~~l~ 220 (289)
T 2cvz_A 161 GHAVKAINNA------------------LLAVNLWAAGEGLLALVKQGVSAEKALEVINASSGR--SNATENLIPQRVLT 220 (289)
T ss_dssp HHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTC--BHHHHHTHHHHTTT
T ss_pred HHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHcCcCHHHHHHHHHccCCC--CHHHHHhccchhhc
Confidence 6665554443 23567789999999999999998776542 111110 00011111001111
Q ss_pred cCCChhhHhHhhcCCcccch-HHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012349 359 KGRLTLDLGDSIKGKGMIQG-ISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 422 (465)
Q Consensus 359 ~g~~~~~~~~~~~~~~~vEG-~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~ 422 (465)
+.. ..+.+++. ....+.++++++++|+ + +|+++++|+++.
T Consensus 221 ~~~---------~~g~~~~~~~kd~~~~~~~a~~~gv--------------~-~p~~~~v~~~~~ 261 (289)
T 2cvz_A 221 RAF---------PKTFALGLLVKDLGIAMGVLDGEKA--------------P-SPLLRLAREVYE 261 (289)
T ss_dssp SCC---------CCSSBHHHHHHHHHHHHHHHTTTCC--------------C-CHHHHHHHHHHH
T ss_pred CCC---------CCCcChHHHHHHHHHHHHHHHHcCC--------------C-ChHHHHHHHHHH
Confidence 111 11123332 2345689999999995 6 899999999986
No 41
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.70 E-value=1.4e-16 Score=158.32 Aligned_cols=261 Identities=12% Similarity=0.055 Sum_probs=164.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
+|||+|||+|.||+.+|..|+++ | ++|++|+|+++.++.++ +
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~-G-----~~V~~~dr~~~~~~~~~---------~----------------------- 56 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW-P-----GGVTVYDIRIEAMTPLA---------E----------------------- 56 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS-T-----TCEEEECSSTTTSHHHH---------H-----------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHHH---------H-----------------------
Confidence 47999999999999999999998 7 89999999987655311 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc-chHHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps-~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
.++.++++++++++ +|+||+|||. +.++++++.+.+.+++ +++||.++.+ .
T Consensus 57 -----------------------~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~~l~~---g~ivv~~st~-~ 108 (296)
T 3qha_A 57 -----------------------AGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAGHAKP---GTVIAIHSTI-S 108 (296)
T ss_dssp -----------------------TTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHTTCCT---TCEEEECSCC-C
T ss_pred -----------------------CCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHHhcCC---CCEEEEeCCC-C
Confidence 02456788889888 9999999995 6889999999888876 6778777643 3
Q ss_pred ccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhh--hccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCChHH
Q 012349 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEI--YNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVT 279 (465)
Q Consensus 202 ~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev--~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~g 279 (465)
+.+ . +.+.+.+... .+.++..|-+.... ..+..+ ++++++++..++++++|+..+.+++...+.-.
T Consensus 109 ~~~-----~----~~~~~~~~~~--g~~~~~~pv~g~~~~a~~g~l~-~~~gg~~~~~~~~~~ll~~~g~~~~~~g~~g~ 176 (296)
T 3qha_A 109 DTT-----A----VELARDLKAR--DIHIVDAPVSGGAAAAARGELA-TMVGADREVYERIKPAFKHWAAVVIHAGEPGA 176 (296)
T ss_dssp HHH-----H----HHHHHHHGGG--TCEEEECCEESCHHHHHHTCEE-EEEECCHHHHHHHHHHHHHHEEEEEEEESTTH
T ss_pred HHH-----H----HHHHHHHHHc--CCEEEeCCCcCCHHHHhcCCcc-EEecCCHHHHHHHHHHHHHHcCCeEEcCChhH
Confidence 321 1 2233322110 11223333322211 134332 45567788889999999988888877777544
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccC-chhhhhhccc----CchhHHHH
Q 012349 280 HEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLL----KGRNAWYG 354 (465)
Q Consensus 280 ve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~-glgDl~~T~~----~sRN~~~G 354 (465)
.++.|.+-|. ....+..+++|+..+++++|.+++++.++ ...|.+.++. ..| +
T Consensus 177 a~~~Kl~~N~------------------~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~i~~~~~~s~~~~----~ 234 (296)
T 3qha_A 177 GTRMKLARNM------------------LTFTSYAAACEAMKLAEAAGLDLQALGRVVRHTDALTGGPGAIMVRD----N 234 (296)
T ss_dssp HHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCCGGGGCCCS----S
T ss_pred HHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHcCCCHHHHhhhcchHHHHhcCcccCHHhh----c
Confidence 5555554443 22445677899999999999999888321 1122222211 111 1
Q ss_pred HHHhcCCChh-hHhHhhcCCcc-cchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012349 355 QELAKGRLTL-DLGDSIKGKGM-IQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 423 (465)
Q Consensus 355 ~~l~~g~~~~-~~~~~~~~~~~-vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~~ 423 (465)
..+.++.... .+.. .. --.......+.+++++.|+ + +|+++.+++++..
T Consensus 235 ~~~~~~~~~~f~~~~-----~~~~~~~KD~~~~~~~a~~~g~--------------~-~p~~~~~~~~~~~ 285 (296)
T 3qha_A 235 MKDLEPDNFLYQPFL-----HTRGLGEKDLSLALALGEAVSV--------------D-LPLARLAYEGLAA 285 (296)
T ss_dssp CSCCCTTSTTHHHHH-----HHHHHHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHHH
T ss_pred hhhhhcCCCCCchhh-----hhhHHHHHHHHHHHHHHHHcCC--------------C-ChHHHHHHHHHHH
Confidence 1111110000 0000 00 1123445678899999994 6 8999999998853
No 42
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.69 E-value=3.8e-16 Score=147.76 Aligned_cols=174 Identities=14% Similarity=0.179 Sum_probs=131.9
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
.+|||+|||+|+||+++|..|+++ | ++|++|+|+++
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~-g-----~~V~~~~~~~~-------------------------------------- 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIA-G-----HEVTYYGSKDQ-------------------------------------- 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECTTCC--------------------------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEcCCHH--------------------------------------
Confidence 357999999999999999999998 7 89999977531
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
+++++|+||+|||++.++++++++.++++ +++++++++|++
T Consensus 54 -----------------------------------~~~~aD~vi~av~~~~~~~v~~~l~~~~~----~~~vi~~~~g~~ 94 (209)
T 2raf_A 54 -----------------------------------ATTLGEIVIMAVPYPALAALAKQYATQLK----GKIVVDITNPLN 94 (209)
T ss_dssp -----------------------------------CSSCCSEEEECSCHHHHHHHHHHTHHHHT----TSEEEECCCCBC
T ss_pred -----------------------------------HhccCCEEEEcCCcHHHHHHHHHHHHhcC----CCEEEEECCCCC
Confidence 23568999999999999999999988776 478999999997
Q ss_pred -ccccc--cccCCCHHHHHHhHhCCCCccEE----EEeCCchhhhhhcc-CceEEEEe-CChhHHHHHHHHHcCCCCeEE
Q 012349 202 -AELEA--VPRIITPTQMINRATGVPIENIL----YLGGPNIASEIYNK-EYANARIC-GAEKWRKPLAKFLRRPHFTVW 272 (465)
Q Consensus 202 -~~~~~--~~~~~~~se~I~e~lg~~~~~i~----vlsGP~~a~ev~~g-~~t~~~~~-~~~~~~~~l~~ll~~~g~~v~ 272 (465)
.+... .++...+++.+++.++. .++. .++||+++.+...+ .++.+.++ .+++..+.++++|+..|++++
T Consensus 95 ~~~~~~l~~~~~~~~~~~l~~~l~~--~~vv~~~~~~~~p~~~~~~~~g~~~~~~~~~g~~~~~~~~v~~ll~~~G~~~~ 172 (209)
T 2raf_A 95 FDTWDDLVVPADSSAAQELQQQLPD--SQVLKAFNTTFAATLQSGQVNGKEPTTVLVAGNDDSAKQRFTRALADSPLEVK 172 (209)
T ss_dssp TTTSSSBSSCTTCCHHHHHHHHCTT--SEEEECSTTSCHHHHHHSEETTTEECEEEEEESCHHHHHHHHHHTTTSSCEEE
T ss_pred ccccccccCCCCCcHHHHHHHHCCC--CcEEEeeecccHhhccccccCCCCCceeEEcCCCHHHHHHHHHHHHHcCCceE
Confidence 22000 00234567888887752 2221 12389999877655 33333444 455778999999999999999
Q ss_pred ecCChHHHHHHHHHHHHHHHHHHhhhcccCC
Q 012349 273 DNGDLVTHEVMGGLKNVYAIGAGMVAALTNE 303 (465)
Q Consensus 273 ~s~Di~gve~~galKNviAia~Gi~~gl~~g 303 (465)
..+|+ +.+.++||+.++.+|+..+.++|
T Consensus 173 ~~~~i---~~a~~~K~i~~l~~~~~~~~g~g 200 (209)
T 2raf_A 173 DAGKL---KRARELEAMGFMQMTLAASEQIG 200 (209)
T ss_dssp EEESG---GGHHHHHHHHHHHHHHHHTTSSC
T ss_pred eCCCH---hHHHHhcchHHHHHHHHHHcCCC
Confidence 98884 45888999999999999988876
No 43
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.68 E-value=9e-16 Score=162.72 Aligned_cols=226 Identities=14% Similarity=0.101 Sum_probs=154.0
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
++|||+|||+|+||+.+|..|+++ | ++++|++|++++++++.++ +++ .+.+.+++.
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~-g---~g~~V~~~D~~~~~v~~l~---------~g~--------~~i~e~gl~--- 63 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHK-C---PHITVTVVDMNTAKIAEWN---------SDK--------LPIYEPGLD--- 63 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHH-C---TTSEEEEECSCHHHHHHHT---------SSS--------CSSCCTTHH---
T ss_pred CCCEEEEECCCHHHHHHHHHHHhc-C---CCCEEEEEECCHHHHHHHH---------CCC--------CCcCCCCHH---
Confidence 358999999999999999999987 3 1279999999998776533 221 222333221
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc---------------hHHHHHHHHHHhhhc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST---------------ETKEVFEEISRYWKE 186 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~---------------~l~~vl~~l~~~l~~ 186 (465)
|++..+. ..++.+++|+.+++.++|+||+|||+. ++.++++.|.+++++
T Consensus 64 --------~~~~~~~--------~~~l~~t~~~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~ 127 (481)
T 2o3j_A 64 --------EIVFAAR--------GRNLFFSSDIPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGG 127 (481)
T ss_dssp --------HHHHHHB--------TTTEEEESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCS
T ss_pred --------HHHHHhh--------cCCEEEECCHHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCC
Confidence 1111100 014778899888889999999998764 389999999998886
Q ss_pred cCCCCEEEEeeccccccccccccCCCHHHHHHhHhCC-CCccEEEEeCCchhhhhhc----cCceEEEEeCCh-----hH
Q 012349 187 RITVPVIISLAKGVEAELEAVPRIITPTQMINRATGV-PIENILYLGGPNIASEIYN----KEYANARICGAE-----KW 256 (465)
Q Consensus 187 ~~~~~ivIs~~kGi~~~~~~~~~~~~~se~I~e~lg~-~~~~i~vlsGP~~a~ev~~----g~~t~~~~~~~~-----~~ 256 (465)
+++||..+ ++.+.+ ...+.+.+.+..+. ....+.+.++|.++.+... ..+..+++++.+ +.
T Consensus 128 ---g~iVV~~S-Tv~~gt-----~~~l~~~l~~~~~~~~~~d~~v~~~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a 198 (481)
T 2o3j_A 128 ---PKIVVEKS-TVPVKA-----AESIGCILREAQKNNENLKFQVLSNPEFLAEGTAMKDLANPDRVLIGGESSPEGLQA 198 (481)
T ss_dssp ---CEEEEECS-CCCTTH-----HHHHHHHHHHHTC----CCEEEEECCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHH
T ss_pred ---CCEEEECC-CCCCCH-----HHHHHHHHHHhhCcCcCCceEEEeCcccccccchhhcccCCCEEEEEecCchhhHHH
Confidence 56666444 555542 22344555442221 1123568899998876542 223334554432 45
Q ss_pred HHHHHHHHcCCCC-eEEecCChHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhc
Q 012349 257 RKPLAKFLRRPHF-TVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLA 334 (465)
Q Consensus 257 ~~~l~~ll~~~g~-~v~~s~Di~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~ 334 (465)
.+.++++|+..+. .++...|+...||.|.+-|.+ + ++....++|+..+++++|.+++++.
T Consensus 199 ~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~~-----------------~-a~~ia~~nE~~~la~~~Gid~~~v~ 259 (481)
T 2o3j_A 199 VAELVRIYENWVPRNRIITTNTWSSELSKLVANAF-----------------L-AQRISSINSISAVCEATGAEISEVA 259 (481)
T ss_dssp HHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHHH-----------------H-HHHHHHHHHHHHHHHHHSCCHHHHH
T ss_pred HHHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHHH-----------------H-HHHHHHHHHHHHHHHHhCcCHHHHH
Confidence 6889999998874 778888999999999888862 2 4556789999999999999876654
No 44
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.67 E-value=2.4e-15 Score=148.58 Aligned_cols=156 Identities=18% Similarity=0.220 Sum_probs=119.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
+|||+|||+|+||++++..|+++ | +.+ .+|++|+|+++.++++ .+. |
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-g-~~~-~~V~v~dr~~~~~~~l---------~~~------------~--------- 49 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-G-YDP-NRICVTNRSLDKLDFF---------KEK------------C--------- 49 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-T-CCG-GGEEEECSSSHHHHHH---------HHT------------T---------
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-C-CCC-CeEEEEeCCHHHHHHH---------HHH------------c---------
Confidence 47999999999999999999998 7 110 2899999998755431 100 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHh-hhccCCCCEEEEeecccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRY-WKERITVPVIISLAKGVE 201 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~-l~~~~~~~ivIs~~kGi~ 201 (465)
++.++++..+++.++|+||+|||++.++++++++.++ +++ +++|||+++|+.
T Consensus 50 ------------------------gi~~~~~~~~~~~~aDvVilav~p~~~~~vl~~l~~~~l~~---~~iiiS~~agi~ 102 (280)
T 3tri_A 50 ------------------------GVHTTQDNRQGALNADVVVLAVKPHQIKMVCEELKDILSET---KILVISLAVGVT 102 (280)
T ss_dssp ------------------------CCEEESCHHHHHSSCSEEEECSCGGGHHHHHHHHHHHHHTT---TCEEEECCTTCC
T ss_pred ------------------------CCEEeCChHHHHhcCCeEEEEeCHHHHHHHHHHHHhhccCC---CeEEEEecCCCC
Confidence 3456778888899999999999999999999999998 876 679999999997
Q ss_pred ccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEe--CChhHHHHHHHHHcCCCCeEEe
Q 012349 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWD 273 (465)
Q Consensus 202 ~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~--~~~~~~~~l~~ll~~~g~~v~~ 273 (465)
.+ .+++.++.+ .+ .+...||++..+..+... ++.+ .+++..+.++++|+..|..+++
T Consensus 103 ~~------------~l~~~l~~~-~~-vvr~mPn~p~~v~~g~~~-l~~~~~~~~~~~~~v~~l~~~iG~~~~v 161 (280)
T 3tri_A 103 TP------------LIEKWLGKA-SR-IVRAMPNTPSSVRAGATG-LFANETVDKDQKNLAESIMRAVGLVIWV 161 (280)
T ss_dssp HH------------HHHHHHTCC-SS-EEEEECCGGGGGTCEEEE-EECCTTSCHHHHHHHHHHHGGGEEEEEC
T ss_pred HH------------HHHHHcCCC-Ce-EEEEecCChHHhcCccEE-EEeCCCCCHHHHHHHHHHHHHCCCeEEE
Confidence 64 467777642 23 467889999888776422 2222 2567889999999999976665
No 45
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.67 E-value=5.8e-16 Score=163.86 Aligned_cols=278 Identities=11% Similarity=0.024 Sum_probs=175.4
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
+|||+|||+|+||+++|..|+++ | ++|.+|+|+++.++.+. +. .++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~-G-----~~V~v~dr~~~~~~~l~---------~~-------------~~~------ 50 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR-G-----YTVAIYNRTTSKTEEVF---------KE-------------HQD------ 50 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSHHHHHHHH---------HH-------------TTT------
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC-C-----CEEEEEcCCHHHHHHHH---------Hh-------------CcC------
Confidence 37899999999999999999998 7 89999999987655421 10 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC---CCEEEEecCc-chHHHHHHHHHHhhhccCCCCEEEEeec
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD---ADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~---aDiVIlaVps-~~l~~vl~~l~~~l~~~~~~~ivIs~~k 198 (465)
.++..++++++++.. +|+||++||+ +.++++++++.+++++ +++||++++
T Consensus 51 -----------------------~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~vl~~l~~~l~~---g~iiId~s~ 104 (474)
T 2iz1_A 51 -----------------------KNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDATIKSLLPLLDI---GDILIDGGN 104 (474)
T ss_dssp -----------------------SCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHHHHHHGGGCCT---TCEEEECSC
T ss_pred -----------------------CCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHHHHHHHhhCCC---CCEEEECCC
Confidence 035567788887766 9999999999 5899999999998876 688999999
Q ss_pred cccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhh--hhccCceEEEEeCChhHHHHHHHHHcCCCCe------
Q 012349 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE--IYNKEYANARICGAEKWRKPLAKFLRRPHFT------ 270 (465)
Q Consensus 199 Gi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~e--v~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~------ 270 (465)
|....+ +.+.+.+... .+.++.+|....+ ...|. + ++.+++++..+.++.+|+..+.+
T Consensus 105 ~~~~~~----------~~l~~~l~~~--g~~~v~~pv~gg~~~a~~g~-~-i~~gg~~~~~~~v~~ll~~~g~~~~~dge 170 (474)
T 2iz1_A 105 THFPDT----------MRRNAELADS--GINFIGTGVSGGEKGALLGP-S-MMPGGQKEAYDLVAPIFEQIAAKAPQDGK 170 (474)
T ss_dssp CCHHHH----------HHHHHHTTTS--SCEEEEEEECSHHHHHHHCC-C-EEEEECHHHHHHHHHHHHHHSCBCTTTCC
T ss_pred CCHHHH----------HHHHHHHHHC--CCeEECCCCCCChhhhccCC-e-EEecCCHHHHHHHHHHHHHHhcccccCCC
Confidence 976531 2344444321 1223334443222 22343 3 34566777888899999876655
Q ss_pred --EEecCChHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHH-hCCCcchhccC------c-hhh
Q 012349 271 --VWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHL-LAEEPEKLAGP------L-LAD 340 (465)
Q Consensus 271 --v~~s~Di~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a-~G~~~~t~~g~------g-lgD 340 (465)
+....+.-...|.+..-| ....++.+++.|+..++++ +|.+++++.++ | +++
T Consensus 171 ~~~~~~g~~g~g~~~Kl~~N------------------~~~~~~~~~laEa~~l~~~~~Gl~~~~~~~l~~~w~~g~~~s 232 (474)
T 2iz1_A 171 PCVAYMGANGAGHYVKMVHN------------------GIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEEWNEGELDS 232 (474)
T ss_dssp BSBCCCBSTTHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCB
T ss_pred ceEEEECCccHHHHHHHHHh------------------HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcCCCccc
Confidence 223333211223333333 2335677899999999999 89988776541 3 566
Q ss_pred hhhccc----CchhHHHHHHHhcCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHH
Q 012349 341 TYVTLL----KGRNAWYGQELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKM 416 (465)
Q Consensus 341 l~~T~~----~sRN~~~G~~l~~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~ 416 (465)
+..+|+ .+||+..|. ...+.+.+. .++.-.| +.+.++++++|+ + +|++..
T Consensus 233 ~l~~~~~~~l~~~d~~~g~-----~~vd~i~D~--~~~k~tG----~~~~~~A~~~gv--------------~-~P~~~~ 286 (474)
T 2iz1_A 233 YLIEITKEVLKRKDDEGEG-----YIVDKILDK--AGNKGTG----KWTSESALDLGV--------------P-LPLITE 286 (474)
T ss_dssp HHHHHHHHHTTCBCSSSSS-----BGGGGBCSC--CCCCSHH----HHHHHHHHHHTC--------------C-CHHHHH
T ss_pred cHHHhhhhHhhcCCCCCCh-----hHHHHHHHh--hcccchH----HHHHHHHHHcCC--------------C-CchHHH
Confidence 666663 456664331 112111110 0112233 467788999994 6 799988
Q ss_pred H--HHHHhcCCCHHHHHHHHHhcc
Q 012349 417 L--YKILIMRESPIQAILEALRDE 438 (465)
Q Consensus 417 v--y~il~~~~~~~~~~~~ll~~~ 438 (465)
. ++++...++.......++..+
T Consensus 287 av~ar~~s~~k~~r~~~~~~~~g~ 310 (474)
T 2iz1_A 287 SVFARYISTYKDERVKASKVLSGP 310 (474)
T ss_dssp HHHHHHHHHCHHHHHHHHHHCCCC
T ss_pred HHHHHHhhhhhhhhHHhhhccCCC
Confidence 4 777776544444444444433
No 46
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.66 E-value=4.3e-15 Score=148.81 Aligned_cols=255 Identities=9% Similarity=0.042 Sum_probs=158.3
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCc--hhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPG--RSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~-~V~l~~r~~--~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~ 118 (465)
.+|||+|||+|.||+++|..|+++ | + +|++|+|++ +..+. +.+
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~-G-----~~~V~~~dr~~~~~~~~~---------~~~------------------- 68 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQA-G-----AIDMAAYDAASAESWRPR---------AEE------------------- 68 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHH-S-----CCEEEEECSSCHHHHHHH---------HHH-------------------
T ss_pred CCCEEEEECccHHHHHHHHHHHHC-C-----CCeEEEEcCCCCHHHHHH---------HHH-------------------
Confidence 468999999999999999999999 8 8 999999973 32221 100
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeec
Q 012349 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 119 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~k 198 (465)
.++..+++++++++++|+||+|||++...++++++.+.+++ +++||.++
T Consensus 69 ---------------------------~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~~~~l~~~l~~---~~ivvd~s- 117 (312)
T 3qsg_A 69 ---------------------------LGVSCKASVAEVAGECDVIFSLVTAQAALEVAQQAGPHLCE---GALYADFT- 117 (312)
T ss_dssp ---------------------------TTCEECSCHHHHHHHCSEEEECSCTTTHHHHHHHHGGGCCT---TCEEEECC-
T ss_pred ---------------------------CCCEEeCCHHHHHhcCCEEEEecCchhHHHHHHhhHhhcCC---CCEEEEcC-
Confidence 02456678888899999999999999988899999988876 67777666
Q ss_pred cccccccccccCCCHHHHHHhHh-CCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCC-
Q 012349 199 GVEAELEAVPRIITPTQMINRAT-GVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD- 276 (465)
Q Consensus 199 Gi~~~~~~~~~~~~~se~I~e~l-g~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~D- 276 (465)
++.+.+ ...+.+.+.+.. |..... +-++||..+. .+..+ ++++++++ +.++.+|+..+.++++..+
T Consensus 118 t~~~~~-----~~~~~~~~~~~~~g~~~vd-~pv~g~~~~~---~g~l~-i~vgg~~~--~~~~~ll~~~g~~~~~~g~~ 185 (312)
T 3qsg_A 118 SCSPAV-----KRAIGDVISRHRPSAQYAA-VAVMSAVKPH---GHRVP-LVVDGDGA--RRFQAAFTLYGCRIEVLDGE 185 (312)
T ss_dssp CCCHHH-----HHHHHHHHHHHCTTCEEEE-EEECSCSTTT---GGGSE-EEEESTTH--HHHHHHHHTTTCEEEECCSS
T ss_pred CCCHHH-----HHHHHHHHHhhcCCCeEEe-ccccCCchhh---cCCEE-EEecCChH--HHHHHHHHHhCCCeEEcCCC
Confidence 444431 122233333321 321111 2356654443 34433 34555544 8899999999999888776
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccCchhhhhhcccCchhH-HHHH
Q 012349 277 LVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVTLLKGRNA-WYGQ 355 (465)
Q Consensus 277 i~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~glgDl~~T~~~sRN~-~~G~ 355 (465)
+-..++.+.+-|.+. .....++.|+..+++++|.+++.+.. +.....|+.+ .++.
T Consensus 186 ~g~a~~~Kl~~n~~~------------------~~~~~~~~Ea~~la~~~Gld~~~~~~------l~~~~~~~~~~~~~~ 241 (312)
T 3qsg_A 186 VGGAALLKMCRSAVL------------------KGLEALFLEALAAAEKMGLADRVLAS------LDASFPEHHLRDLAL 241 (312)
T ss_dssp TTHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHTTTCHHHHHHH------HHHHSGGGTHHHHHH
T ss_pred CCHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHcCCCHHHHHH------HHhcCCchhHHHhhh
Confidence 655666666555321 22335678989999999998743321 1111112211 1121
Q ss_pred HHhcCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012349 356 ELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 422 (465)
Q Consensus 356 ~l~~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~ 422 (465)
.+..+. ..- +..+ ....+.+.+++++.|+ + +|+++.+++++.
T Consensus 242 ~~~~~~----~~~----g~~~--~KDl~~~~~~a~~~g~--------------~-~pl~~~~~~~~~ 283 (312)
T 3qsg_A 242 YLVERN----LEH----ADRR--AHELGEVAATLCSVGV--------------E-PLVAEAGYRRLT 283 (312)
T ss_dssp HHHHHH----HHH----HHHH--HHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHH
T ss_pred HhhcCC----CCc----ccch--HHHHHHHHHHHHHcCC--------------C-cHHHHHHHHHHH
Confidence 111100 000 0001 2444578889999995 6 799999988775
No 47
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.66 E-value=2.6e-15 Score=150.98 Aligned_cols=164 Identities=14% Similarity=0.137 Sum_probs=121.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch--hhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR--SVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~--~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
+|||+|||+|+||++||..|+++ |... .++|++|+|+++ .++. +++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~-G~~~-~~~V~v~~r~~~~~~~~~---------l~~~-------------------- 70 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA-GVLA-AHKIMASSPDMDLATVSA---------LRKM-------------------- 70 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT-TSSC-GGGEEEECSCTTSHHHHH---------HHHH--------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCCC-cceEEEECCCccHHHHHH---------HHHc--------------------
Confidence 47999999999999999999988 6322 168999999874 3332 1100
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
++.++++..+++.++|+||+|||++.++++++++.+.+.+ +++||++++|+
T Consensus 71 --------------------------G~~~~~~~~e~~~~aDvVilav~~~~~~~vl~~l~~~l~~---~~ivvs~s~gi 121 (322)
T 2izz_A 71 --------------------------GVKLTPHNKETVQHSDVLFLAVKPHIIPFILDEIGADIED---RHIVVSCAAGV 121 (322)
T ss_dssp --------------------------TCEEESCHHHHHHHCSEEEECSCGGGHHHHHHHHGGGCCT---TCEEEECCTTC
T ss_pred --------------------------CCEEeCChHHHhccCCEEEEEeCHHHHHHHHHHHHhhcCC---CCEEEEeCCCC
Confidence 2345667778888999999999999999999999988876 68999999999
Q ss_pred cccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCC---hhHHHHHHHHHcCCCCeEEecCCh
Q 012349 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGA---EKWRKPLAKFLRRPHFTVWDNGDL 277 (465)
Q Consensus 201 ~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~---~~~~~~l~~ll~~~g~~v~~s~Di 277 (465)
..+. +.+.+.+.++. . ..+...|+++.++..+. + +..+++ ++..+.++++|+..|+++++.+|+
T Consensus 122 ~~~~--------l~~~l~~~~~~--~-~vv~~~p~~p~~~~~g~-~-v~~~g~~~~~~~~~~v~~ll~~~G~~~~~~e~~ 188 (322)
T 2izz_A 122 TISS--------IEKKLSAFRPA--P-RVIRCMTNTPVVVREGA-T-VYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDL 188 (322)
T ss_dssp CHHH--------HHHHHHTTSSC--C-EEEEEECCGGGGGTCEE-E-EEEECTTCCHHHHHHHHHHHHTTEEEEECCGGG
T ss_pred CHHH--------HHHHHhhcCCC--C-eEEEEeCCcHHHHcCCe-E-EEEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHH
Confidence 7641 23334333321 2 35678899998887664 2 233333 577889999999999999888776
Q ss_pred HH
Q 012349 278 VT 279 (465)
Q Consensus 278 ~g 279 (465)
..
T Consensus 189 ~~ 190 (322)
T 2izz_A 189 ID 190 (322)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 48
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.66 E-value=3e-15 Score=144.62 Aligned_cols=161 Identities=17% Similarity=0.099 Sum_probs=118.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
+|||+|||+|+||++++..|+++ |.+.+ .+|++|+|++++++++ .+. .
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~-g~~~~-~~V~~~~r~~~~~~~~---------~~~----------------~----- 49 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINK-NIVSS-NQIICSDLNTANLKNA---------SEK----------------Y----- 49 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TSSCG-GGEEEECSCHHHHHHH---------HHH----------------H-----
T ss_pred CCeEEEECccHHHHHHHHHHHhC-CCCCC-CeEEEEeCCHHHHHHH---------HHH----------------h-----
Confidence 47999999999999999999998 71111 2899999998755431 100 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~ 202 (465)
++..++++++++.++|+||+|||++.++++++++.+++++ ++++||+++|+..
T Consensus 50 ------------------------g~~~~~~~~e~~~~aDvVilav~~~~~~~v~~~l~~~l~~---~~~vvs~~~gi~~ 102 (247)
T 3gt0_A 50 ------------------------GLTTTTDNNEVAKNADILILSIKPDLYASIINEIKEIIKN---DAIIVTIAAGKSI 102 (247)
T ss_dssp ------------------------CCEECSCHHHHHHHCSEEEECSCTTTHHHHC---CCSSCT---TCEEEECSCCSCH
T ss_pred ------------------------CCEEeCChHHHHHhCCEEEEEeCHHHHHHHHHHHHhhcCC---CCEEEEecCCCCH
Confidence 2345678888889999999999999999999999988876 6789999999876
Q ss_pred cccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEe--CChhHHHHHHHHHcCCCCeEEecCCh
Q 012349 203 ELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGDL 277 (465)
Q Consensus 203 ~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~--~~~~~~~~l~~ll~~~g~~v~~s~Di 277 (465)
+ .+++.++.. . ..+...|+++..+..|.. .++.+ .+++..+.++++|+..|..+++.++.
T Consensus 103 ~------------~l~~~~~~~-~-~~v~~~p~~p~~~~~g~~-~~~~~~~~~~~~~~~~~~l~~~~G~~~~~~e~~ 164 (247)
T 3gt0_A 103 E------------STENAFNKK-V-KVVRVMPNTPALVGEGMS-ALCPNEMVTEKDLEDVLNIFNSFGQTEIVSEKL 164 (247)
T ss_dssp H------------HHHHHHCSC-C-EEEEEECCGGGGGTCEEE-EEEECTTCCHHHHHHHHHHHGGGEEEEECCGGG
T ss_pred H------------HHHHHhCCC-C-cEEEEeCChHHHHcCceE-EEEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHH
Confidence 4 466767532 2 246678999887776642 22332 46678899999999999877776554
No 49
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.66 E-value=6.3e-15 Score=143.02 Aligned_cols=239 Identities=13% Similarity=0.145 Sum_probs=148.7
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEec--CchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRR--PGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r--~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
|||+|||+|+||+++|..|+++ | ++|++|+| +++.++. +.+.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~-g-----~~V~~~~~~~~~~~~~~---------~~~~--------------------- 44 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSR-G-----VEVVTSLEGRSPSTIER---------ARTV--------------------- 44 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-T-----CEEEECCTTCCHHHHHH---------HHHH---------------------
T ss_pred CeEEEEechHHHHHHHHHHHHC-C-----CeEEEeCCccCHHHHHH---------HHHC---------------------
Confidence 6999999999999999999998 7 89999987 3332221 1000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
++. +++++++.++|+||+|||++.....+.++.+.++ + +++++ +++.
T Consensus 45 -------------------------g~~--~~~~~~~~~aDvvi~~v~~~~~~~~~~~~~~~~~----~-~vi~~-s~~~ 91 (264)
T 1i36_A 45 -------------------------GVT--ETSEEDVYSCPVVISAVTPGVALGAARRAGRHVR----G-IYVDI-NNIS 91 (264)
T ss_dssp -------------------------TCE--ECCHHHHHTSSEEEECSCGGGHHHHHHHHHTTCC----S-EEEEC-SCCC
T ss_pred -------------------------CCc--CCHHHHHhcCCEEEEECCCHHHHHHHHHHHHhcC----c-EEEEc-cCCC
Confidence 122 4566778899999999999865555666666543 4 56655 4665
Q ss_pred ccccccccCCCHHHHHHhHhCCCC-ccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecC-ChHH
Q 012349 202 AELEAVPRIITPTQMINRATGVPI-ENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNG-DLVT 279 (465)
Q Consensus 202 ~~~~~~~~~~~~se~I~e~lg~~~-~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~-Di~g 279 (465)
+.+ .+.+.+.++... ....+..+|..+. .+.+ +++++++. +.+++ |+..|.+++... ++-.
T Consensus 92 ~~~---------~~~l~~~~~~~g~~~~~v~~~~~~~~---~g~~--~~~~g~~~--~~~~~-l~~~g~~~~~~~~~~g~ 154 (264)
T 1i36_A 92 PET---------VRMASSLIEKGGFVDAAIMGSVRRKG---ADIR--IIASGRDA--EEFMK-LNRYGLNIEVRGREPGD 154 (264)
T ss_dssp HHH---------HHHHHHHCSSSEEEEEEECSCHHHHG---GGCE--EEEESTTH--HHHHG-GGGGTCEEEECSSSTTH
T ss_pred HHH---------HHHHHHHHhhCCeeeeeeeCCccccc---cCCe--EEecCCcH--HHhhh-HHHcCCeeEECCCCcCH
Confidence 431 134566664311 0122344444333 3443 34455443 78888 999998865544 4555
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccC--chh-hhhhccc--CchhHHHH
Q 012349 280 HEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP--LLA-DTYVTLL--KGRNAWYG 354 (465)
Q Consensus 280 ve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~--glg-Dl~~T~~--~sRN~~~G 354 (465)
..|.+..-|.+. ..+..++.|+..+++++|.+++.+..+ ..| ++..++. .+||+..|
T Consensus 155 ~~~~kl~~n~~~------------------~~~~~~~~Ea~~la~~~G~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g 216 (264)
T 1i36_A 155 ASAIKMLRSSYT------------------KGVSALLWETLTAAHRLGLEEDVLEMLEYTEGNDFRESAISRLKSSCIHA 216 (264)
T ss_dssp HHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHTTCHHHHHHHHHTTSCSSTHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHcCCcHHHHHHHHHhcCccHHHHHHHHhcCCCCcc
Confidence 667665555432 245678999999999999987533211 111 2222211 12222211
Q ss_pred HHHhcCCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012349 355 QELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 423 (465)
Q Consensus 355 ~~l~~g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~~ 423 (465)
. + ++...+.+.++++++ + + +|+++++|+++..
T Consensus 217 ~-------------------~--~~~~~~~~~~~a~~~-v--------------~-~p~~~~v~~~~~~ 248 (264)
T 1i36_A 217 R-------------------R--RYEEMKEVQDMLAEV-I--------------D-PVMPTCIIRIFDK 248 (264)
T ss_dssp H-------------------H--HHHHHHHHHHHHHTT-S--------------C-CSHHHHHHHHHHH
T ss_pred h-------------------h--hHHHHHHHHHHHHHh-c--------------C-chHHHHHHHHHHH
Confidence 1 1 456667788999998 8 5 7999999999874
No 50
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.66 E-value=1.9e-15 Score=156.69 Aligned_cols=210 Identities=14% Similarity=0.070 Sum_probs=146.1
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhcC
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (465)
|||+|||+|+||+.+|..|++ | ++|++|+|++++++.++. ++ .+.+-++..
T Consensus 1 MkI~VIG~G~vG~~~A~~La~--G-----~~V~~~d~~~~~~~~l~~---------~~--------~~i~e~~l~----- 51 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL--Q-----NEVTIVDILPSKVDKINN---------GL--------SPIQDEYIE----- 51 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--T-----SEEEEECSCHHHHHHHHT---------TC--------CSSCCHHHH-----
T ss_pred CEEEEECCCHHHHHHHHHHhC--C-----CEEEEEECCHHHHHHHHc---------CC--------CCcCCCCHH-----
Confidence 699999999999999999986 5 899999999887765332 21 011111110
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-----------hHHHHHHHHHHhhhccCCCCE
Q 012349 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-----------ETKEVFEEISRYWKERITVPV 192 (465)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-----------~l~~vl~~l~~~l~~~~~~~i 192 (465)
++++.. ..++.+++++.+++.++|+||+|||+. +++++++.+.+ +.+ +++
T Consensus 52 ------~~~~~~---------~~~l~~t~~~~~~~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~---~~i 112 (402)
T 1dlj_A 52 ------YYLKSK---------QLSIKATLDSKAAYKEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNS---HAT 112 (402)
T ss_dssp ------HHHHHS---------CCCEEEESCHHHHHHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCS---SCE
T ss_pred ------HHHHhc---------cCcEEEeCCHHHHhcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCC---CCE
Confidence 111110 014678889888889999999999987 69999999998 776 677
Q ss_pred EEE-eeccccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhc----cCceEEEEeCCh-------hHHHHH
Q 012349 193 IIS-LAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYN----KEYANARICGAE-------KWRKPL 260 (465)
Q Consensus 193 vIs-~~kGi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~----g~~t~~~~~~~~-------~~~~~l 260 (465)
||. .+++.... +.+.+.++.. .+.++|.+..+... ..+..+++++.+ +.++.+
T Consensus 113 VV~~ST~~~g~~-----------~~l~~~~~~~----~v~~~Pe~~~~G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~ 177 (402)
T 1dlj_A 113 LIIKSTIPIGFI-----------TEMRQKFQTD----RIIFSPEFLRESKALYDNLYPSRIIVSCEENDSPKVKADAEKF 177 (402)
T ss_dssp EEECSCCCTTHH-----------HHHHHHTTCS----CEEECCCCCCTTSTTHHHHSCSCEEEECCTTSCHHHHHHHHHH
T ss_pred EEEeCCCCccHH-----------HHHHHHhCCC----eEEECCccccCcchhhcccCCCEEEEeCCCcccchhHHHHHHH
Confidence 665 56555432 4566666532 35688887765431 112335555544 667889
Q ss_pred HHHHcCCCCe---EEecCChHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhc
Q 012349 261 AKFLRRPHFT---VWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLA 334 (465)
Q Consensus 261 ~~ll~~~g~~---v~~s~Di~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~ 334 (465)
.++|...+++ ++...|+...||.|.+.|.+ + ++....++|+..+|+++|.++..+.
T Consensus 178 ~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~-----------------~-a~~ia~~nE~~~l~~~~Gid~~~v~ 236 (402)
T 1dlj_A 178 ALLLKSAAKKNNVPVLIMGASEAEAVKLFANTY-----------------L-ALRVAYFNELDTYAESRKLNSHMII 236 (402)
T ss_dssp HHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHH-----------------H-HHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHhhhhccCCceEEecChHHHHHHHHHHHHH-----------------H-HHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 9999765654 56778999999999999964 1 2334678999999999999876554
No 51
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.65 E-value=3.7e-15 Score=144.45 Aligned_cols=250 Identities=14% Similarity=0.146 Sum_probs=156.0
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhcC
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (465)
|||+|||+|+||+++|..|+++ |. ++|++|+|+++.++.+ .+. +
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~-g~----~~v~~~~r~~~~~~~~---------~~~------------~---------- 44 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQ-GG----YRIYIANRGAEKRERL---------EKE------------L---------- 44 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CS----CEEEEECSSHHHHHHH---------HHH------------T----------
T ss_pred CEEEEECchHHHHHHHHHHHHC-CC----CeEEEECCCHHHHHHH---------HHh------------c----------
Confidence 6999999999999999999988 51 6899999998655431 100 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccccc
Q 012349 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (465)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~~ 203 (465)
++.+++++.+++ ++|+||+|||++.++++++++.+ + +++|+++++|+.++
T Consensus 45 -----------------------g~~~~~~~~~~~-~~D~vi~~v~~~~~~~v~~~l~~--~----~~ivv~~~~g~~~~ 94 (263)
T 1yqg_A 45 -----------------------GVETSATLPELH-SDDVLILAVKPQDMEAACKNIRT--N----GALVLSVAAGLSVG 94 (263)
T ss_dssp -----------------------CCEEESSCCCCC-TTSEEEECSCHHHHHHHHTTCCC--T----TCEEEECCTTCCHH
T ss_pred -----------------------CCEEeCCHHHHh-cCCEEEEEeCchhHHHHHHHhcc--C----CCEEEEecCCCCHH
Confidence 123445555667 89999999999999999887765 2 47899999998763
Q ss_pred ccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeC--ChhHHHHHHHHHcCCCCeEEec-CChHHH
Q 012349 204 LEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICG--AEKWRKPLAKFLRRPHFTVWDN-GDLVTH 280 (465)
Q Consensus 204 ~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~--~~~~~~~l~~ll~~~g~~v~~s-~Di~gv 280 (465)
.+++.++.. .++ +...|+++..+..|... +..+. +++..+.++++|+..|+++++. +|
T Consensus 95 ------------~l~~~~~~~-~~~-v~~~~~~~~~~~~g~~~-i~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~---- 155 (263)
T 1yqg_A 95 ------------TLSRYLGGT-RRI-VRVMPNTPGKIGLGVSG-MYAEAEVSETDRRIADRIMKSVGLTVWLDDEE---- 155 (263)
T ss_dssp ------------HHHHHTTSC-CCE-EEEECCGGGGGTCEEEE-EECCTTSCHHHHHHHHHHHHTTEEEEECSSTT----
T ss_pred ------------HHHHHcCCC-CcE-EEEcCCHHHHHcCceEE-EEcCCCCCHHHHHHHHHHHHhCCCEEEeCChh----
Confidence 466666532 233 33479988877776532 23333 5677899999999999988777 65
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccCchhhhhhcccCchhHHHHHHHh-c
Q 012349 281 EVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQELA-K 359 (465)
Q Consensus 281 e~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~glgDl~~T~~~sRN~~~G~~l~-~ 359 (465)
.+.++.|+. | .+ +.. ...+..++.|+ +.+.|.+++++..+ .... . ...++.+. .
T Consensus 156 ----~~~~~~al~-g------~~-~~~-~~~~~~~l~e~---~~~~G~~~~~~~~~-----~~~~--~--~~~~~~~~~~ 210 (263)
T 1yqg_A 156 ----KMHGITGIS-G------SG-PAY-VFYLLDALQNA---AIRQGFDMAEARAL-----SLAT--F--KGAVALAEQT 210 (263)
T ss_dssp ----HHHHHHHHT-T------SH-HHH-HHHHHHHHHHH---HHHTTCCHHHHHHH-----HHHH--H--HHHHHHHHHH
T ss_pred ----hccHHHHHH-c------cH-HHH-HHHHHHHHHHH---HHHcCCCHHHHHHH-----HHHH--H--HHHHHHHHhc
Confidence 222222321 1 11 111 13344555554 77888887665431 1110 0 00111111 3
Q ss_pred CCChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012349 360 GRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 423 (465)
Q Consensus 360 g~~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~~ 423 (465)
|.+...+.+.. +-.|..+...+..+ ++.| ++ .|+.+++++.+..
T Consensus 211 ~~~~~~~~~~~----~~~~~~~~~~l~~l-~~~~--------------~~-~~~~~a~~~~~~~ 254 (263)
T 1yqg_A 211 GEDFEKLQKNV----TSKGGTTHEAVEAF-RRHR--------------VA-EAISEGVCACVRR 254 (263)
T ss_dssp CCCHHHHHHHT----CCTTSHHHHHHHHH-HHTT--------------HH-HHHHHHHHHHHHH
T ss_pred CCCHHHHHHhc----CCCChhHHHHHHHH-HHCC--------------HH-HHHHHHHHHHHHH
Confidence 43332222221 23455554455444 7777 46 6999999998864
No 52
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.64 E-value=2.6e-15 Score=159.73 Aligned_cols=286 Identities=12% Similarity=0.015 Sum_probs=170.5
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
..+|+|||+|+||++||..|+++ | ++|++|+|+++++++++. .. .++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~-G-----~~V~v~dr~~~~~~~l~~--------~~-------------~~~------ 56 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADH-G-----FTVCAYNRTQSKVDHFLA--------NE-------------AKG------ 56 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSHHHHHHHH--------TT-------------TTT------
T ss_pred CCCEEEEeeHHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHc--------cc-------------ccC------
Confidence 36899999999999999999999 8 899999999986654211 00 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC---CCEEEEecCc-chHHHHHHHHHHhhhccCCCCEEEEeec
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD---ADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~---aDiVIlaVps-~~l~~vl~~l~~~l~~~~~~~ivIs~~k 198 (465)
.++..++++++++.. +|+||++||+ +.++++++++.+++++ +++||++++
T Consensus 57 -----------------------~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~l~~---g~iIId~s~ 110 (497)
T 2p4q_A 57 -----------------------KSIIGATSIEDFISKLKRPRKVMLLVKAGAPVDALINQIVPLLEK---GDIIIDGGN 110 (497)
T ss_dssp -----------------------SSEECCSSHHHHHHTSCSSCEEEECCCSSHHHHHHHHHHGGGCCT---TCEEEECSC
T ss_pred -----------------------CCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHHHHHHHHHHhCCC---CCEEEECCC
Confidence 034556788887776 9999999999 5999999999998876 689999999
Q ss_pred cccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCChH
Q 012349 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLV 278 (465)
Q Consensus 199 Gi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~ 278 (465)
|....+ ..+.+.+.+ .|.......+..||..+. .|. .++++++++..+.++.+|+..+.++ |
T Consensus 111 ~~~~~~------~~l~~~l~~-~g~~~v~~pVsgg~~~a~---~G~--~im~gg~~e~~~~v~~ll~~~g~~~----d-- 172 (497)
T 2p4q_A 111 SHFPDS------NRRYEELKK-KGILFVGSGVSGGEEGAR---YGP--SLMPGGSEEAWPHIKNIFQSISAKS----D-- 172 (497)
T ss_dssp CCHHHH------HHHHHHHHH-TTCEEEEEEEESHHHHHH---HCC--EEEEEECGGGHHHHHHHHHHHSCEE----T--
T ss_pred CChhHH------HHHHHHHHH-cCCceeCCCcccChhHhh---cCC--eEEecCCHHHHHHHHHHHHHhcCcc----C--
Confidence 876531 112222322 232111123344454443 343 3455677888899999998766652 1
Q ss_pred H---HHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHH-hCCCcchhccC-c---hhhhhhcccCchh
Q 012349 279 T---HEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHL-LAEEPEKLAGP-L---LADTYVTLLKGRN 350 (465)
Q Consensus 279 g---ve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a-~G~~~~t~~g~-g---lgDl~~T~~~sRN 350 (465)
| +.+.|. .|....+++. .|.....+.+++.|+..++++ +|.+++++.++ . -|+ .+++..+|
T Consensus 173 Ge~~v~~vg~--------~G~g~~~Kl~-~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~~~~w~~g~--~~S~l~~~ 241 (497)
T 2p4q_A 173 GEPCCEWVGP--------AGAGHYVKMV-HNGIEYGDMQLICEAYDIMKRLGGFTDKEISDVFAKWNNGV--LDSFLVEI 241 (497)
T ss_dssp TEESCCCCEE--------TTHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTTT--TCBHHHHH
T ss_pred CCCceEEECC--------ccHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHhcCCc--cccHHHHH
Confidence 1 111111 1222222332 333445677999999999999 79998877542 1 122 23334555
Q ss_pred HHHHHHHhcCCCh--hhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHH-H-HHHHhcCCC
Q 012349 351 AWYGQELAKGRLT--LDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKM-L-YKILIMRES 426 (465)
Q Consensus 351 ~~~G~~l~~g~~~--~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~-v-y~il~~~~~ 426 (465)
+ +..+.++.-. ..+. .+.....--| |.+.+.+.++++|+ + +|++.. + .+++...++
T Consensus 242 ~--~~~l~~~d~~~~~~vd-~i~D~~~~Kg--tG~~~~~~A~~~Gv--------------~-~P~~~~av~ar~~s~~k~ 301 (497)
T 2p4q_A 242 T--RDILKFDDVDGKPLVE-KIMDTAGQKG--TGKWTAINALDLGM--------------P-VTLIGEAVFARCLSALKN 301 (497)
T ss_dssp H--HHHHTCBCTTSSBGGG-GSCCCCCCCS--HHHHHHHHHHHHTC--------------C-CHHHHHHHHHHHHHHCHH
T ss_pred H--HHHHhcCCCCCccHHH-HHHHhhccch--HHHHHHHHHHHcCC--------------C-CchHHHHHHHHHhhcchh
Confidence 4 3445543210 0011 0100000011 33457788999994 6 799887 3 455554433
Q ss_pred HHHHHHHHHh
Q 012349 427 PIQAILEALR 436 (465)
Q Consensus 427 ~~~~~~~ll~ 436 (465)
.......++.
T Consensus 302 ~r~~~~~~~~ 311 (497)
T 2p4q_A 302 ERIRASKVLP 311 (497)
T ss_dssp HHHHHHHHCC
T ss_pred hHHHHhhhcC
Confidence 3333333444
No 53
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.63 E-value=3.4e-15 Score=156.08 Aligned_cols=217 Identities=15% Similarity=0.087 Sum_probs=151.3
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhcC
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (465)
.|.+|||+|+||..+|..|+++ | |+|++|++++++++.+ ++++ ++.|.|+++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~-G-----~~V~~~D~~~~kv~~L---------~~g~--------~pi~epgl~----- 63 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKH-G-----VDVLGVDINQQTIDKL---------QNGQ--------ISIEEPGLQ----- 63 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-T-----CEEEEECSCHHHHHHH---------HTTC--------CSSCCTTHH-----
T ss_pred CccEEEeeCHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHHH---------HCCC--------CCcCCCCHH-----
Confidence 4899999999999999999999 8 9999999999888763 3332 456666542
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcch------------HHHHHHHHHHhhhccCCCC
Q 012349 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE------------TKEVFEEISRYWKERITVP 191 (465)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~------------l~~vl~~l~~~l~~~~~~~ 191 (465)
|++.+.... .++.+|+|+ ++||+||+|||+.. +.++++.+.+++++ ++
T Consensus 64 ------~ll~~~~~~-------g~l~~ttd~----~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~---g~ 123 (431)
T 3ojo_A 64 ------EVYEEVLSS-------GKLKVSTTP----EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKK---GN 123 (431)
T ss_dssp ------HHHHHHHHT-------TCEEEESSC----CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCT---TE
T ss_pred ------HHHHhhccc-------CceEEeCch----hhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCC---CC
Confidence 222211000 257888874 47999999999764 78888999998876 56
Q ss_pred EEEEeeccccccccccccCCCHHHHHHhHhCCC-CccEEEEeCCchhhhhhc----cCceEEEEeCChhHHHHHHHHHcC
Q 012349 192 VIISLAKGVEAELEAVPRIITPTQMINRATGVP-IENILYLGGPNIASEIYN----KEYANARICGAEKWRKPLAKFLRR 266 (465)
Q Consensus 192 ivIs~~kGi~~~~~~~~~~~~~se~I~e~lg~~-~~~i~vlsGP~~a~ev~~----g~~t~~~~~~~~~~~~~l~~ll~~ 266 (465)
+|| ...++++.+ .+.+++.+.+..|.. ...+.++++|.+..+... ..++.++.+.+++..+.++.+|+.
T Consensus 124 iVV-~~STV~pgt-----t~~v~~~i~e~~g~~~~~d~~v~~~Pe~~~~G~A~~~~~~p~~Iv~G~~~~~~~~~~~ly~~ 197 (431)
T 3ojo_A 124 TII-VESTIAPKT-----MDDFVKPVIENLGFTIGEDIYLVHCPERVLPGKILEELVHNNRIIGGVTKACIEAGKRVYRT 197 (431)
T ss_dssp EEE-ECSCCCTTH-----HHHTHHHHHHTTTCCBTTTEEEEECCCCCCTTSHHHHHHHSCEEEEESSHHHHHHHHHHHTT
T ss_pred EEE-EecCCChhH-----HHHHHHHHHHHcCCCcCCCeEEEECCCcCCCcchhhcccCCCEEEEeCCHHHHHHHHHHHHH
Confidence 555 555888763 333444444434421 134789999998776542 124456667778888999999987
Q ss_pred CCCeEEecCChHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcch
Q 012349 267 PHFTVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEK 332 (465)
Q Consensus 267 ~g~~v~~s~Di~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t 332 (465)
.+-......|+...|+.|.+-|.+ + +.-...++|+..+|+++|+++..
T Consensus 198 ~~~~~~~~~~~~~AE~~Kl~~N~~-----------------~-a~~Ia~~nE~~~l~e~~GiD~~~ 245 (431)
T 3ojo_A 198 FVQGEMIETDARTAEMSKLMENTY-----------------R-DVNIALANELTKICNNLNINVLD 245 (431)
T ss_dssp TCCSCEEEEEHHHHHHHHHHHHHH-----------------H-HHHHHHHHHHHHHHHHTTCCHHH
T ss_pred HhCCcEEeCCHHHHHHHHHHHHHH-----------------H-HHHHHHHHHHHHHHHHcCCCHHH
Confidence 665455557888888888877742 1 12235678888999988886543
No 54
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.63 E-value=4.9e-16 Score=152.41 Aligned_cols=180 Identities=16% Similarity=0.091 Sum_probs=120.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCe--eEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~--~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
||||+|||+|+||+++|..|+++ | + +|++|+|+++.++.+ .+. +.
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~-g-----~~~~V~~~d~~~~~~~~~---------~~~---------------g~--- 47 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRS-G-----FKGKIYGYDINPESISKA---------VDL---------------GI--- 47 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHT-T-----CCSEEEEECSCHHHHHHH---------HHT---------------TS---
T ss_pred CcEEEEEecCHHHHHHHHHHHhc-C-----CCcEEEEEeCCHHHHHHH---------HHC---------------CC---
Confidence 47999999999999999999988 7 6 899999987654421 100 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc-CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecc
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW-DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~-~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kG 199 (465)
....++++++++. ++|+||+|||++.+.++++++.+++++ +++|+.++++
T Consensus 48 --------------------------~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~l~~~l~~---~~iv~~~~~~ 98 (281)
T 2g5c_A 48 --------------------------IDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAKKLSYILSE---DATVTDQGSV 98 (281)
T ss_dssp --------------------------CSEEESCGGGGGGTCCSEEEECSCHHHHHHHHHHHHHHSCT---TCEEEECCSC
T ss_pred --------------------------cccccCCHHHHhcCCCCEEEEcCCHHHHHHHHHHHHhhCCC---CcEEEECCCC
Confidence 0123566777788 999999999999999999999988876 5666665533
Q ss_pred ccccccccccCCCHHHHHHhHhCC---CCccEE--EEeCCchhh-hhhccCceEEEE--eCChhHHHHHHHHHcCCCCeE
Q 012349 200 VEAELEAVPRIITPTQMINRATGV---PIENIL--YLGGPNIAS-EIYNKEYANARI--CGAEKWRKPLAKFLRRPHFTV 271 (465)
Q Consensus 200 i~~~~~~~~~~~~~se~I~e~lg~---~~~~i~--vlsGP~~a~-ev~~g~~t~~~~--~~~~~~~~~l~~ll~~~g~~v 271 (465)
... ..+.+.+.++. +.+++. ..+||+++. ++..+.++.++. +.+++..+.++++|+..|+++
T Consensus 99 -~~~---------~~~~l~~~l~~~~v~~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~ 168 (281)
T 2g5c_A 99 -KGK---------LVYDLENILGKRFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVV 168 (281)
T ss_dssp -CTH---------HHHHHHHHHGGGEECEEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSCHHHHHHHHHHHHHTTCEE
T ss_pred -cHH---------HHHHHHHhccccceeeccccCCccCChhhhhhHHhCCCCEEEecCCCCCHHHHHHHHHHHHHcCCEE
Confidence 221 11233443321 112221 345777765 445666554433 346677899999999999999
Q ss_pred EecCChHH---HHHHHHHHHHHHHHH
Q 012349 272 WDNGDLVT---HEVMGGLKNVYAIGA 294 (465)
Q Consensus 272 ~~s~Di~g---ve~~galKNviAia~ 294 (465)
+..++... +.+++.+.|.++++.
T Consensus 169 ~~~~~~~~d~~~~~~~~~~~~~a~~~ 194 (281)
T 2g5c_A 169 EYMSPELHDYVFGVVSHLPHAVAFAL 194 (281)
T ss_dssp EECCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred EEcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887766 444555566544433
No 55
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.62 E-value=3e-14 Score=137.91 Aligned_cols=153 Identities=12% Similarity=0.145 Sum_probs=115.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
+|||+|||+|+||+++|..|+++ |.+.+ ++|++|+|+++. .
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-g~~~~-~~v~~~~~~~~~------------------------------~------- 44 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-NIIKK-ENLFYYGPSKKN------------------------------T------- 44 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-TSSCG-GGEEEECSSCCS------------------------------S-------
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCCCC-CeEEEEeCCccc------------------------------C-------
Confidence 47999999999999999999988 62211 589999998641 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~ 202 (465)
.+.+++++.+++.++|+||+|||++.++++++++.++++ ++.+|+.++|+..
T Consensus 45 ------------------------g~~~~~~~~~~~~~~D~vi~~v~~~~~~~v~~~l~~~l~----~~~vv~~~~gi~~ 96 (262)
T 2rcy_A 45 ------------------------TLNYMSSNEELARHCDIIVCAVKPDIAGSVLNNIKPYLS----SKLLISICGGLNI 96 (262)
T ss_dssp ------------------------SSEECSCHHHHHHHCSEEEECSCTTTHHHHHHHSGGGCT----TCEEEECCSSCCH
T ss_pred ------------------------ceEEeCCHHHHHhcCCEEEEEeCHHHHHHHHHHHHHhcC----CCEEEEECCCCCH
Confidence 123456677778899999999999999999999998874 5789999999976
Q ss_pred cccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeC--ChhHHHHHHHHHcCCCCeEEecCCh
Q 012349 203 ELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICG--AEKWRKPLAKFLRRPHFTVWDNGDL 277 (465)
Q Consensus 203 ~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~--~~~~~~~l~~ll~~~g~~v~~s~Di 277 (465)
+ .+++.++.. .+ .+..+|+++.....| ++.+..+. +++..+.++++|+..|..++..+|.
T Consensus 97 ~------------~l~~~~~~~-~~-~v~~~p~~p~~~~~g-~~~~~~~~~~~~~~~~~~~~ll~~~G~~~~~~~~~ 158 (262)
T 2rcy_A 97 G------------KLEEMVGSE-NK-IVWVMPNTPCLVGEG-SFIYCSNKNVNSTDKKYVNDIFNSCGIIHEIKEKD 158 (262)
T ss_dssp H------------HHHHHHCTT-SE-EEEEECCGGGGGTCE-EEEEEECTTCCHHHHHHHHHHHHTSEEEEECCGGG
T ss_pred H------------HHHHHhCCC-Cc-EEEECCChHHHHcCC-eEEEEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHH
Confidence 4 466666532 13 356789999888777 44333332 5677899999999999755555554
No 56
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.62 E-value=5.7e-15 Score=140.50 Aligned_cols=171 Identities=15% Similarity=0.174 Sum_probs=122.2
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEE-EecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRI-WRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l-~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
+||||+|||+|+||+++|..|+++ | ++|++ |+|+++.++++. +. +
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~-g-----~~V~~v~~r~~~~~~~l~---------~~-------------~------ 67 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAA-Q-----IPAIIANSRGPASLSSVT---------DR-------------F------ 67 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHT-T-----CCEEEECTTCGGGGHHHH---------HH-------------H------
T ss_pred cCCEEEEECCCHHHHHHHHHHHhC-C-----CEEEEEECCCHHHHHHHH---------HH-------------h------
Confidence 358999999999999999999998 7 89999 999987655311 10 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
++..+.+..+++.++|+||+|||++.++++++++.+ ++ +++||+++||+
T Consensus 68 --------------------------g~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~l~~-~~----~~ivi~~~~g~ 116 (220)
T 4huj_A 68 --------------------------GASVKAVELKDALQADVVILAVPYDSIADIVTQVSD-WG----GQIVVDASNAI 116 (220)
T ss_dssp --------------------------TTTEEECCHHHHTTSSEEEEESCGGGHHHHHTTCSC-CT----TCEEEECCCCB
T ss_pred --------------------------CCCcccChHHHHhcCCEEEEeCChHHHHHHHHHhhc-cC----CCEEEEcCCCC
Confidence 011222334557899999999999999999999877 43 57999999999
Q ss_pred ccccccc--ccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhc-cC-----ceEEEE-eCChhHHHHHHHHHcCCCCeE
Q 012349 201 EAELEAV--PRIITPTQMINRATGVPIENILYLGGPNIASEIYN-KE-----YANARI-CGAEKWRKPLAKFLRRPHFTV 271 (465)
Q Consensus 201 ~~~~~~~--~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~-g~-----~t~~~~-~~~~~~~~~l~~ll~~~g~~v 271 (465)
+...... .+....++.+++.++. .+ .+...|++...+.. +. +..+.+ +.+++..+.++++|+..|+++
T Consensus 117 ~~~~~~~~~~~~~~~~~~l~~~l~~--~~-vv~~~~~~~~~v~~~g~~~~~~~~~v~~~g~~~~~~~~v~~l~~~~G~~~ 193 (220)
T 4huj_A 117 DFPAFKPRDLGGRLSTEIVSELVPG--AK-VVKAFNTLPAAVLAADPDKGTGSRVLFLSGNHSDANRQVAELISSLGFAP 193 (220)
T ss_dssp CTTTCCBCCCTTCCHHHHHHHHSTT--CE-EEEESCSSCHHHHTSCSBCSSCEEEEEEEESCHHHHHHHHHHHHHTTCEE
T ss_pred CcccccccccCCCcHHHHHHHHCCC--CC-EEECCCCCCHHHhhhCcccCCCCeeEEEeCCCHHHHHHHHHHHHHhCCCe
Confidence 6110000 0234567888888862 23 46777887776554 22 232333 456778899999999999999
Q ss_pred EecCChHHH
Q 012349 272 WDNGDLVTH 280 (465)
Q Consensus 272 ~~s~Di~gv 280 (465)
+...++...
T Consensus 194 ~~~G~l~~a 202 (220)
T 4huj_A 194 VDLGTLAAS 202 (220)
T ss_dssp EECCSHHHH
T ss_pred EeeCChhhc
Confidence 999887544
No 57
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.61 E-value=1e-14 Score=154.02 Aligned_cols=225 Identities=14% Similarity=0.116 Sum_probs=150.6
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
.+|||+|||+|+||+.+|..|+++ | ++++|++|+|++++++.+ ++++ .+.+.+++.
T Consensus 4 ~~mkI~VIG~G~mG~~lA~~La~~-g---~G~~V~~~d~~~~~~~~l---------~~g~--------~~i~e~~l~--- 59 (467)
T 2q3e_A 4 EIKKICCIGAGYVGGPTCSVIAHM-C---PEIRVTVVDVNESRINAW---------NSPT--------LPIYEPGLK--- 59 (467)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHH-C---TTSEEEEECSCHHHHHHH---------TSSS--------CSSCCTTHH---
T ss_pred CccEEEEECCCHHHHHHHHHHHhc-C---CCCEEEEEECCHHHHHHH---------hCCC--------CCcCCCCHH---
Confidence 358999999999999999999987 4 128999999998877653 2221 233333321
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcch---------------HHHHHHHHHHhhhc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE---------------TKEVFEEISRYWKE 186 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~---------------l~~vl~~l~~~l~~ 186 (465)
+++..+. ..++.+++|+++++.++|+||+|||... +.++++++.+++++
T Consensus 60 --------~~~~~~~--------~~~~~~t~~~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~ 123 (467)
T 2q3e_A 60 --------EVVESCR--------GKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNG 123 (467)
T ss_dssp --------HHHHHHB--------TTTEEEESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCS
T ss_pred --------HHHHHhh--------cCCEEEECCHHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCC
Confidence 1111100 0147788999888999999999998543 67888899888776
Q ss_pred cCCCCEEEEeeccccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhc----cCceEEEEeC-----ChhHH
Q 012349 187 RITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYN----KEYANARICG-----AEKWR 257 (465)
Q Consensus 187 ~~~~~ivIs~~kGi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~----g~~t~~~~~~-----~~~~~ 257 (465)
+++||..+ .+.+.+ ...+.+.+.+. +.....+.+.++|.++.+... ..+..+++++ +++..
T Consensus 124 ---g~iVV~~S-Tv~~g~-----~~~l~~~l~~~-~~~~~d~~V~~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~ 193 (467)
T 2q3e_A 124 ---YKIVTEKS-TVPVRA-----AESIRRIFDAN-TKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAV 193 (467)
T ss_dssp ---EEEEEECS-CCCTTH-----HHHHHHHHHHT-CCTTCEEEEEECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHH
T ss_pred ---CCEEEECC-cCCchH-----HHHHHHHHHHh-CCCCCCeEEEeCHHHhhcccchhhccCCCEEEECCCCCCCCHHHH
Confidence 56666544 344431 12233444432 211124567899998875432 1233344554 45667
Q ss_pred HHHHHHHcCC-CCeEEecCChHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhc
Q 012349 258 KPLAKFLRRP-HFTVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLA 334 (465)
Q Consensus 258 ~~l~~ll~~~-g~~v~~s~Di~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~ 334 (465)
+.++++|+.. +..+....|+...||.|.+-|.+ + ++....++|+..+++++|++++++.
T Consensus 194 ~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~-----------------~-a~~ia~~nE~~~l~~~~Gid~~~v~ 253 (467)
T 2q3e_A 194 QALCAVYEHWVPREKILTTNTWSSELSKLAANAF-----------------L-AQRISSINSISALCEATGADVEEVA 253 (467)
T ss_dssp HHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHH-----------------H-HHHHHHHHHHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHH-----------------H-HHHHHHHHHHHHHHHHhCcCHHHHH
Confidence 8999999987 65667777888889998888853 1 3456788999999999999876554
No 58
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.61 E-value=1.8e-14 Score=150.53 Aligned_cols=211 Identities=16% Similarity=0.153 Sum_probs=146.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
.+|||+|||+|+||+.+|..|++ | ++|++|++++++++.+ +++ .++.+.++++
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~--G-----~~V~~~D~~~~~v~~l---------~~g--------~~~i~e~~l~--- 87 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ--N-----HEVVALDIVQAKVDML---------NQK--------ISPIVDKEIQ--- 87 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT--T-----SEEEEECSCHHHHHHH---------HTT--------CCSSCCHHHH---
T ss_pred CCCEEEEECcCHHHHHHHHHHHc--C-----CeEEEEecCHHHhhHH---------hcc--------CCccccccHH---
Confidence 45899999999999999999985 5 8999999999877753 322 1344555432
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-----------hHHHHHHHHHHhhhccCCC
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-----------ETKEVFEEISRYWKERITV 190 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-----------~l~~vl~~l~~~l~~~~~~ 190 (465)
|+++.+ ..++.+++|+++++++||+||+|||+. +++++++.+.+ +++ +
T Consensus 88 --------~ll~~~---------~~~l~~ttd~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~---g 146 (432)
T 3pid_A 88 --------EYLAEK---------PLNFRATTDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INP---N 146 (432)
T ss_dssp --------HHHHHS---------CCCEEEESCHHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCT---T
T ss_pred --------HHHhhc---------cCCeEEEcCHHHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCC---C
Confidence 222211 015789999999999999999999986 68999999998 776 6
Q ss_pred CEEEEeeccccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhc----cCceEEEEeCChhHHHHHHHHHcC
Q 012349 191 PVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYN----KEYANARICGAEKWRKPLAKFLRR 266 (465)
Q Consensus 191 ~ivIs~~kGi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~----g~~t~~~~~~~~~~~~~l~~ll~~ 266 (465)
++|| ...++.+.+ ++.+.+.++.. .+.+.|.+..+... -.+..++++++++.++++..+|..
T Consensus 147 ~iVV-~~STv~pgt---------t~~l~~~l~~~----~v~~sPe~~~~G~A~~~~l~p~rIvvG~~~~~~~~~~~ll~~ 212 (432)
T 3pid_A 147 AVMI-IKSTIPVGF---------TRDIKERLGID----NVIFSPEFLREGRALYDNLHPSRIVIGERSARAERFADLLKE 212 (432)
T ss_dssp SEEE-ECSCCCTTH---------HHHHHHHHTCC----CEEECCCCCCTTSHHHHHHSCSCEEESSCSHHHHHHHHHHHH
T ss_pred cEEE-EeCCCChHH---------HHHHHHHHhhc----cEeecCccCCcchhhhcccCCceEEecCCHHHHHHHHHHHHh
Confidence 7665 444676652 24455555421 34568888766442 123446777777788888888875
Q ss_pred C----CCeEEecCChHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchh
Q 012349 267 P----HFTVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKL 333 (465)
Q Consensus 267 ~----g~~v~~s~Di~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~ 333 (465)
. +.++.. .|+...|+.|.+-|.+ + ++-...++|+..+|+++|.++..+
T Consensus 213 ~~~~~~~~v~~-~~~~~AE~~Kl~~N~~-----------------~-a~~Ia~~nEl~~lae~~GiD~~~v 264 (432)
T 3pid_A 213 GAIKQDIPTLF-TDSTEAEAIKLFANTY-----------------L-ALRVAYFNELDSYAESQGLNSKQI 264 (432)
T ss_dssp HCSSSSCCEEE-CCHHHHHHHHHHHHHH-----------------H-HHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred hhccCCCeEEe-cCccHHHHHHHHHHHH-----------------H-HHHHHHHHHHHHHHHHcCCCHHHH
Confidence 2 223444 5788788887776642 1 234467889999999999876544
No 59
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.58 E-value=3.2e-15 Score=158.33 Aligned_cols=274 Identities=13% Similarity=0.074 Sum_probs=167.1
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
.+|||+|||+|.||+++|..|+++ | ++|++|+|+++.++.+. +.+ ..+
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~-G-----~~V~v~dr~~~~~~~l~---------~~g------------~~g----- 50 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDH-G-----FVVCAFNRTVSKVDDFL---------ANE------------AKG----- 50 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSTHHHHHHH---------HTT------------TTT-----
T ss_pred CCCEEEEEChhHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHH---------hcc------------cCC-----
Confidence 458999999999999999999999 8 89999999997665421 110 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc---CCCEEEEecCc-chHHHHHHHHHHhhhccCCCCEEEEee
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW---DADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLA 197 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~---~aDiVIlaVps-~~l~~vl~~l~~~l~~~~~~~ivIs~~ 197 (465)
.++..+++++++++ ++|+||++||+ +.++++++++.+++++ +++||.++
T Consensus 51 ------------------------~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~L~~---g~iIId~s 103 (484)
T 4gwg_A 51 ------------------------TKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVDDFIEKLVPLLDT---GDIIIDGG 103 (484)
T ss_dssp ------------------------SSCEECSSHHHHHHTBCSSCEEEECSCSSHHHHHHHHHHGGGCCT---TCEEEECS
T ss_pred ------------------------CceeccCCHHHHHhhccCCCEEEEecCChHHHHHHHHHHHHhcCC---CCEEEEcC
Confidence 13445677888766 59999999999 4899999999999877 78999999
Q ss_pred ccccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCCh
Q 012349 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDL 277 (465)
Q Consensus 198 kGi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di 277 (465)
++....+ ....+.+.+ .|.......+..||..+. .|. .++++++++..+.++.+|+..+-++ .+|.
T Consensus 104 t~~~~~t------~~~~~~l~~-~Gi~fvd~pVsGg~~gA~---~G~--~im~GG~~ea~~~v~pll~~ig~~v--~~~~ 169 (484)
T 4gwg_A 104 NSEYRDT------TRRCRDLKA-KGILFVGSGVSGGEEGAR---YGP--SLMPGGNKEAWPHIKTIFQGIAAKV--GTGE 169 (484)
T ss_dssp CCCHHHH------HHHHHHHHH-TTCEEEEEEEESHHHHHH---HCC--EEEEEECGGGHHHHHHHHHHHSCBC--TTSC
T ss_pred CCCchHH------HHHHHHHHh-hccccccCCccCCHHHHh---cCC--eeecCCCHHHHHHHHHHHHHhcCcc--cCCC
Confidence 8875432 112222322 232111223444455443 343 3566777888889999998655443 1222
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHH-hCCCcchhccC-c---hhhhhhcccCchhHH
Q 012349 278 VTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHL-LAEEPEKLAGP-L---LADTYVTLLKGRNAW 352 (465)
Q Consensus 278 ~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a-~G~~~~t~~g~-g---lgDl~~T~~~sRN~~ 352 (465)
.++.++|. .|....+++. .|.....+.+++.|+..+++. +|.+++++.+. . -|+ ..++..+|+.
T Consensus 170 ~~~~~~G~--------~Gag~~vKmv-~N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~~v~~~w~~G~--~~S~l~e~~~ 238 (484)
T 4gwg_A 170 PCCDWVGD--------EGAGHFVKMV-HNGIEYGDMQLICEAYHLMKDVLGMAQDEMAQAFEDWNKTE--LDSFLIEITA 238 (484)
T ss_dssp BSBCCCEE--------TTHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTT--TCBHHHHHHH
T ss_pred ceEEEECC--------ccHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHcCCC--ccchHHHHHH
Confidence 22222110 1111222222 233334566889999999999 99998776441 0 111 1222344543
Q ss_pred HHHHHhc----CC-ChhhHhHhhcCCcccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCc-HHHHHHHHHh
Q 012349 353 YGQELAK----GR-LTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCP-ILKMLYKILI 422 (465)
Q Consensus 353 ~G~~l~~----g~-~~~~~~~~~~~~~~vEG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~P-i~~~vy~il~ 422 (465)
..|.+ |. .++.+.+. .++.-||.-|+.. +.++| ++ +| |..+||.-+.
T Consensus 239 --~~l~~~D~~g~~~ld~i~d~--~~~kgtG~wt~~~----A~~~g--------------vp-~p~i~~av~~R~~ 291 (484)
T 4gwg_A 239 --NILKFQDTDGKHLLPKIRDS--AGQKGTGKWTAIS----ALEYG--------------VP-VTLIGEAVFARCL 291 (484)
T ss_dssp --HHHHCBCTTSSBSGGGSCCC--CCSSCTTHHHHHH----HHHHT--------------CC-CHHHHHHHHHHHH
T ss_pred --HHHhcCCccCCccHHHHhcc--ccCcchHHHHHHH----HHHcC--------------CC-chHHHHHHHHHHH
Confidence 34442 22 23333322 2346799888666 34777 47 79 6777876554
No 60
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.57 E-value=1.8e-14 Score=139.16 Aligned_cols=192 Identities=12% Similarity=0.121 Sum_probs=120.6
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchh--hhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS--VDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~--~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
..|||+|||+|+||+++|..|+++ | ++|++|+|+++. .+....+ ++ +.. +..+.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~-G-----~~V~~~~r~~~~~~~~~~~~~-----~~-----------~~~-~~~~~- 73 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADL-G-----HEVTIGTRDPKATLARAEPDA-----MG-----------APP-FSQWL- 73 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHTCC-----------------------CC-HHHHG-
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCChhhhhhhhhhhh-----hc-----------chh-hhHHH-
Confidence 458999999999999999999998 7 899999999864 1110000 00 000 00000
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHH-HHhhhccCCCCEEEEeec
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEI-SRYWKERITVPVIISLAK 198 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l-~~~l~~~~~~~ivIs~~k 198 (465)
. .+ ... .++++.++++++|+||+|||++...+++.++ .+.+ + +++||+++|
T Consensus 74 --~--~~-------------------~~~-~~~~~~e~~~~aDvVilavp~~~~~~~~~~i~~~~l-~---g~ivi~~s~ 125 (245)
T 3dtt_A 74 --P--EH-------------------PHV-HLAAFADVAAGAELVVNATEGASSIAALTAAGAENL-A---GKILVDIAN 125 (245)
T ss_dssp --G--GS-------------------TTC-EEEEHHHHHHHCSEEEECSCGGGHHHHHHHHCHHHH-T---TSEEEECCC
T ss_pred --h--hc-------------------Cce-eccCHHHHHhcCCEEEEccCcHHHHHHHHHhhhhhc-C---CCEEEECCC
Confidence 0 00 012 3466778889999999999999999999998 7777 4 689999998
Q ss_pred cccccc-----cccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccC------ceEEEEe-CChhHHHHHHHHHcC
Q 012349 199 GVEAEL-----EAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKE------YANARIC-GAEKWRKPLAKFLRR 266 (465)
Q Consensus 199 Gi~~~~-----~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~------~t~~~~~-~~~~~~~~l~~ll~~ 266 (465)
|+.... ....+...+++.+++.++. .+ .+...|+....+..+. +..++++ .+++..+.++.+|+.
T Consensus 126 ~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~--~~-vv~~~~~~~a~v~~~~~~a~~g~~~~~v~g~d~~~~~~v~~ll~~ 202 (245)
T 3dtt_A 126 PLDFSHGMPPTLNPVNTDSLGEQIQRTFPE--AK-VVKTLNTMNASLMVDPGRAAGGDHSVFVSGNDAAAKAEVATLLKS 202 (245)
T ss_dssp CEECTTCSSCEESSCSSCCHHHHHHHHSTT--SE-EEECSTTSCHHHHHCGGGTGGGCCCEEEECSCHHHHHHHHHHHHH
T ss_pred CCCCcCCccccccCCCCccHHHHHHHHCCC--Ce-EEEeecccCHHHhcCccccCCCCeeEEEECCCHHHHHHHHHHHHH
Confidence 763210 0001345778889888863 23 3344444444333221 2223444 457788999999999
Q ss_pred CCCe-EEecCChHHHHHHHHHHH
Q 012349 267 PHFT-VWDNGDLVTHEVMGGLKN 288 (465)
Q Consensus 267 ~g~~-v~~s~Di~gve~~galKN 288 (465)
.+++ ++...++-.....+.+-|
T Consensus 203 ~g~~~~~~~G~~g~a~~~k~~~~ 225 (245)
T 3dtt_A 203 LGHQDVIDLGDITTARGAEMLLP 225 (245)
T ss_dssp TTCCCEEEEESGGGHHHHHTTHH
T ss_pred cCCCceeccCcHHHHHHhhhhHH
Confidence 9985 455555533333333334
No 61
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.55 E-value=8.7e-14 Score=138.62 Aligned_cols=259 Identities=16% Similarity=0.174 Sum_probs=154.6
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhcC
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (465)
+||+|||.|.||..+|..|+++ | |+|++|+|+++++++ +..
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-G-----~~V~v~dr~~~~~~~--------------------------l~~------- 46 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-G-----YELVVWNRTASKAEP--------------------------LTK------- 46 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-T-----CEEEEC-------CT--------------------------TTT-------
T ss_pred CcEEEEecHHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHH--------------------------HHH-------
Confidence 5899999999999999999999 8 999999999875543 110
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH-HHHHHhhhccCCCCEEEEeecccc
Q 012349 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl-~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
......+++.++++++|+||+++|.. ..++++ ..+.+.+.+ ++++|.++. +.
T Consensus 47 ----------------------~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~~~~~---~~iiid~sT-~~ 100 (297)
T 4gbj_A 47 ----------------------LGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVEKLGK---DGVHVSMST-IS 100 (297)
T ss_dssp ----------------------TTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHHHHCT---TCEEEECSC-CC
T ss_pred ----------------------cCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHhhcCC---CeEEEECCC-CC
Confidence 03456678888999999999999975 445544 456666665 677776664 34
Q ss_pred ccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCChHH-H
Q 012349 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVT-H 280 (465)
Q Consensus 202 ~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~g-v 280 (465)
+++ .+.+.+.+.+ .|.......+..||..+. .|..+ ++++++.+..++++.+|+..+-++++..+..| -
T Consensus 101 p~~-----~~~~~~~~~~-~g~~~ldapVsGg~~~a~---~g~l~-im~gG~~~~~~~~~~~l~~~g~~i~~~g~~~G~g 170 (297)
T 4gbj_A 101 PET-----SRQLAQVHEW-YGAHYVGAPIFARPEAVR---AKVGN-ICLSGNAGAKERIKPIVENFVKGVFDFGDDPGAA 170 (297)
T ss_dssp HHH-----HHHHHHHHHH-TTCEEEECCEECCHHHHH---HTCCE-EEEEECHHHHHHHHHHHHTTCSEEEECCSCTTHH
T ss_pred hHH-----HHHHHHHHHh-cCCceecCCcCCCccccc---cccce-eecccchhHHHHHHHHHHHhhCCeEEecCCccHH
Confidence 431 1122222222 221111112334443333 34433 45677888889999999999988877665434 3
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccCchhhhhhccc-Cchh-HHHHHHHh
Q 012349 281 EVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVTLL-KGRN-AWYGQELA 358 (465)
Q Consensus 281 e~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~glgDl~~T~~-~sRN-~~~G~~l~ 358 (465)
+..|.+-|. .......++.|...++++.|.+++++.. .+.+.. .|.- ..++..+.
T Consensus 171 ~~~Kl~~N~------------------~~~~~~~~~aEa~~la~~~Gld~~~~~~-----~l~~~~~~s~~~~~~~~~~~ 227 (297)
T 4gbj_A 171 NVIKLAGNF------------------MIACSLEMMGEAFTMAEKNGISRQSIYE-----MLTSTLFAAPIFQNYGKLVA 227 (297)
T ss_dssp HHHHHHHHH------------------HHHHHHHHHHHHHHHHHHTTCCHHHHHH-----HHHTTTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHH------------------HHHHHHHHHHHHHHHHHHcCCCHHHHHH-----HHHhhcccCchhhccCcccc
Confidence 333333332 1123456788999999999999987753 222221 1111 12333333
Q ss_pred cCCChhhHhHhhcCCccc-chHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012349 359 KGRLTLDLGDSIKGKGMI-QGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 422 (465)
Q Consensus 359 ~g~~~~~~~~~~~~~~~v-EG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~ 422 (465)
.+.-. ..+-.+ -.......+.+++++.|+ + +|+...+++++.
T Consensus 228 ~~~~~-------p~~f~~~l~~KDl~l~~~~A~~~g~--------------~-~p~~~~~~~~~~ 270 (297)
T 4gbj_A 228 SNTYE-------PVAFRFPLGLKDINLTLQTASDVNA--------------P-MPFADIIRNRFI 270 (297)
T ss_dssp HTCCC-------SCSSBHHHHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHH
T ss_pred CCCCC-------CccchhHHHHHHHHHHHHHHHHhCC--------------C-ChHHHHHHHHHH
Confidence 32210 000011 234556678899999994 6 899999888764
No 62
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.53 E-value=7.7e-13 Score=131.95 Aligned_cols=256 Identities=13% Similarity=0.090 Sum_probs=155.1
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
.+|||+|||+|.||+++|..|+++ | ++|++|+|+++.++++ .+.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~-G-----~~V~~~dr~~~~~~~~---------~~~--------------------- 51 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQ-G-----KRVAIWNRSPGKAAAL---------VAA--------------------- 51 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSHHHHHHH---------HHH---------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHH---------HHC---------------------
Confidence 458999999999999999999998 7 8999999998755431 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHHH--HHHHhhhccCCCCEEEEeec
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFE--EISRYWKERITVPVIISLAK 198 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl~--~l~~~l~~~~~~~ivIs~~k 198 (465)
++..+++++++++++|+||++||.. .+++++. .+.+. .+ ++++|.++.
T Consensus 52 -------------------------g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~l~~~-~~---g~ivid~st 102 (306)
T 3l6d_A 52 -------------------------GAHLCESVKAALSASPATIFVLLDNHATHEVLGMPGVARA-LA---HRTIVDYTT 102 (306)
T ss_dssp -------------------------TCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTSTTHHHH-TT---TCEEEECCC
T ss_pred -------------------------CCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhcccchhhc-cC---CCEEEECCC
Confidence 2345678888899999999999976 5888886 66554 33 577777764
Q ss_pred cccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEec--CC
Q 012349 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDN--GD 276 (465)
Q Consensus 199 Gi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s--~D 276 (465)
+ .+.+ ...+.+.+.+ .|.......+..+|..+ ..+.. .++++++++..++++.+|+..+-+++.. .+
T Consensus 103 ~-~~~~-----~~~l~~~~~~-~g~~~vdapv~g~~~~~---~~~~~-~i~~gg~~~~~~~~~~ll~~lg~~~~~~~~g~ 171 (306)
T 3l6d_A 103 N-AQDE-----GLALQGLVNQ-AGGHYVKGMIVAYPRNV---GHRES-HSIHTGDREAFEQHRALLEGLAGHTVFLPWDE 171 (306)
T ss_dssp C-CTTH-----HHHHHHHHHH-TTCEEEEEEEESCGGGT---TCTTC-EEEEEECHHHHHHHHHHHHTTCSEEEECCHHH
T ss_pred C-CHHH-----HHHHHHHHHH-cCCeEEecccccCcccc---cCCce-EEEEcCCHHHHHHHHHHHHHhcCCEEEecCCC
Confidence 3 3331 1122222222 22111111222233222 22222 3455677888899999999885566655 33
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhccCchhhhhhcccC-chhH---H
Q 012349 277 LVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVTLLK-GRNA---W 352 (465)
Q Consensus 277 i~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~g~glgDl~~T~~~-sRN~---~ 352 (465)
-.|. +.++|++++ ....++.|+..++++.|.+++++.. ++..... .++. .
T Consensus 172 ~~g~--g~~~k~~~~-------------------~~~~~~~Ea~~la~~~Gld~~~~~~-----~~~~~~~~~~s~~~~~ 225 (306)
T 3l6d_A 172 ALAF--ATVLHAHAF-------------------AAMVTFFEAVGAGDRFGLPVSKTAR-----LLLETSRFFVADALEE 225 (306)
T ss_dssp HHHH--HHHHHHHHH-------------------HHHHHHHHHHHHHHHTTCCHHHHHH-----HHHHHHHHHHHHHHHH
T ss_pred CccH--HHHHHHHHH-------------------HHHHHHHHHHHHHHHcCCCHHHHHH-----HHHHhhhhcccHHHHH
Confidence 2222 334441110 1235788999999999999887743 2222110 1111 1
Q ss_pred HHHHHhcCCChhhHhHhhcCCc-cc-chHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012349 353 YGQELAKGRLTLDLGDSIKGKG-MI-QGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 422 (465)
Q Consensus 353 ~G~~l~~g~~~~~~~~~~~~~~-~v-EG~~t~~~v~~la~~~~~~~~~~~~~~~~~~v~~~Pi~~~vy~il~ 422 (465)
++..+.++. ..... ++ -.....+.+.+.+++.|+ + +|+.+.+.+++.
T Consensus 226 ~~~~~~~~~--------~~~~~~~~~~~~KDl~~~~~~a~~~g~--------------~-~p~~~~~~~~~~ 274 (306)
T 3l6d_A 226 AVRRLETQD--------FKGDQARLDVHADAFAHIAQSLHAQGV--------------W-TPVFDAVCQVVQ 274 (306)
T ss_dssp HHHHHHHTC--------CCTTSSBHHHHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHH
T ss_pred HHHHHhcCC--------CCCCcccHHHHHHHHHHHHHHHHHcCC--------------C-chHHHHHHHHHH
Confidence 233333221 11111 22 234566788999999994 6 799999988875
No 63
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.52 E-value=3.8e-13 Score=140.73 Aligned_cols=239 Identities=14% Similarity=0.091 Sum_probs=151.1
Q ss_pred cCCCeeEeecchhHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhh
Q 012349 13 SSNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEH 92 (465)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~ 92 (465)
||.-+-|||+|-+- ....|.+|+|||+|.+|..+|..||+. | |+|+.+|.++++++.
T Consensus 3 ~~~~~~~~~~~~~p------------~~~~m~~IaViGlGYVGLp~A~~~A~~-G-----~~V~g~Did~~kV~~----- 59 (444)
T 3vtf_A 3 SSHHHHHHSSGLVP------------RGSHMASLSVLGLGYVGVVHAVGFALL-G-----HRVVGYDVNPSIVER----- 59 (444)
T ss_dssp ----------CCCC------------TTCCCCEEEEECCSHHHHHHHHHHHHH-T-----CEEEEECSCHHHHHH-----
T ss_pred cccccccccCCcCC------------CCCCCCEEEEEccCHHHHHHHHHHHhC-C-----CcEEEEECCHHHHHH-----
Confidence 66677888888653 112456999999999999999999999 8 999999999988876
Q ss_pred hHHHHhchhhhHHhhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc--
Q 012349 93 LFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-- 170 (465)
Q Consensus 93 l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps-- 170 (465)
+|++. .+.+.|+++ |++.+.... .++.+|+|.++++.++|++|+|||.
T Consensus 60 ----ln~G~--------~pi~Epgl~-----------ell~~~~~~-------g~l~~tt~~~~ai~~ad~~~I~VpTP~ 109 (444)
T 3vtf_A 60 ----LRAGR--------PHIYEPGLE-----------EALGRALSS-------GRLSFAESAEEAVAATDATFIAVGTPP 109 (444)
T ss_dssp ----HHTTC--------CSSCCTTHH-----------HHHHHHHHT-------TCEEECSSHHHHHHTSSEEEECCCCCB
T ss_pred ----HHCCC--------CCCCCCCHH-----------HHHHHHHHc-------CCeeEEcCHHHHHhcCCceEEEecCCC
Confidence 44432 344545432 333322111 2588999999999999999999975
Q ss_pred --------chHHHHHHHHHHhhhccCCCCEEEEeeccccccccccccCCC-HHHHHHhHhCCCCccEEEEeCCchhhhhh
Q 012349 171 --------TETKEVFEEISRYWKERITVPVIISLAKGVEAELEAVPRIIT-PTQMINRATGVPIENILYLGGPNIASEIY 241 (465)
Q Consensus 171 --------~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~~~~~~~~~~~-~se~I~e~lg~~~~~i~vlsGP~~a~ev~ 241 (465)
.++.++++.|.+++++..++++|| .-..+.+. +.+. ....+.+..+ ...+.+.+.|.+..+..
T Consensus 110 ~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV-~eSTVppG-----tte~~~~~~l~~~~~--~~~f~v~~~PErl~eG~ 181 (444)
T 3vtf_A 110 APDGSADLRYVEAAARAVGRGIRAKGRWHLVV-VKSTVPPG-----TTEGLVARAVAEEAG--GVKFSVASNPEFLREGS 181 (444)
T ss_dssp CTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEE-ECSCCCTT-----TTTTHHHHHHHTTTT--TCCCEEEECCCCCCTTS
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEE-EeCCCCCc-----hHHHHHHHHHHHhCC--CCCceeecCcccccCCc
Confidence 268899999999886421134443 43345554 2332 2234444333 23467889999988644
Q ss_pred c----cCceEEEEeC-ChhHHHHHHHHHcCCCCeEEecCChHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHH
Q 012349 242 N----KEYANARICG-AEKWRKPLAKFLRRPHFTVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCT 316 (465)
Q Consensus 242 ~----g~~t~~~~~~-~~~~~~~l~~ll~~~g~~v~~s~Di~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~ 316 (465)
. ..+..++++. ++...+.++++++...-.+ +..|+...|+.|.+-|.+ ++. =...+
T Consensus 182 a~~d~~~~~riViG~~~~~a~~~~~~ly~~~~~~~-~~~~~~~AE~~Kl~eN~~-----------------rav-nIa~~ 242 (444)
T 3vtf_A 182 ALEDFFKPDRIVIGAGDERAASFLLDVYKAVDAPK-LVMKPREAELVKYASNVF-----------------LAL-KISFA 242 (444)
T ss_dssp HHHHHHSCSCEEEEESSHHHHHHHHHHTTTSCSCE-EEECHHHHHHHHHHHHHH-----------------HHH-HHHHH
T ss_pred cccccccCCcEEEcCCCHHHHHHHHHHHhccCCCE-EEechhHHHHHHHHHHHH-----------------HHH-HHHHH
Confidence 2 1233445554 4556677888887654443 456888899988877742 221 22457
Q ss_pred HHHHHHHHHhCCCcc
Q 012349 317 SEMVFITHLLAEEPE 331 (465)
Q Consensus 317 ~E~~~l~~a~G~~~~ 331 (465)
+|+..+|+.+|++..
T Consensus 243 NEla~ice~~GiDv~ 257 (444)
T 3vtf_A 243 NEVGLLAKRLGVDTY 257 (444)
T ss_dssp HHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHcCCCHH
Confidence 899999999988643
No 64
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.50 E-value=8e-14 Score=139.19 Aligned_cols=200 Identities=15% Similarity=0.141 Sum_probs=131.2
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
.|+||++||.|.||..||..|.++ | |+|++|+|+++.++.+ ..
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~-G-----~~v~v~dr~~~~~~~l--------------------------~~----- 44 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKA-G-----YLLNVFDLVQSAVDGL--------------------------VA----- 44 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHT-T-----CEEEEECSSHHHHHHH--------------------------HH-----
T ss_pred CcCEEEEeeehHHHHHHHHHHHhC-C-----CeEEEEcCCHHHHHHH--------------------------HH-----
Confidence 467999999999999999999999 8 9999999998765431 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHHHH---HHHhhhccCCCCEEEEee
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFEE---ISRYWKERITVPVIISLA 197 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl~~---l~~~l~~~~~~~ivIs~~ 197 (465)
......+++.++++.+|+||+|+|.. .+++++.. +.+.+.+ ++++|.++
T Consensus 45 ------------------------~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~---g~iiId~s 97 (300)
T 3obb_A 45 ------------------------AGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP---GTLVLECS 97 (300)
T ss_dssp ------------------------TTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC----CEEEECS
T ss_pred ------------------------cCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhhhhcCCC---CCEEEECC
Confidence 02345678899999999999999964 67777755 3444444 67787776
Q ss_pred ccccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCCh
Q 012349 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDL 277 (465)
Q Consensus 198 kGi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di 277 (465)
.. .+++ .+.+.+.+.+ .|.......|..||.-|. .|..+ ++++++++..++++.+|+.-+-++++..+.
T Consensus 98 T~-~p~~-----~~~~a~~~~~-~G~~~lDaPVsGg~~~A~---~G~L~-imvGG~~~~~~~~~p~l~~~g~~i~~~G~~ 166 (300)
T 3obb_A 98 TI-APTS-----ARKIHAAARE-RGLAMLDAPVSGGTAGAA---AGTLT-FMVGGDAEALEKARPLFEAMGRNIFHAGPD 166 (300)
T ss_dssp CC-CHHH-----HHHHHHHHHT-TTCEEEECCEESCHHHHH---HTCEE-EEEESCHHHHHHHHHHHHHHEEEEEEEEST
T ss_pred CC-CHHH-----HHHHHHHHHH-cCCEEEecCCCCCHHHHH---hCCEE-EEEeCCHHHHHHHHHHHHHhCCCEEEeCCc
Confidence 43 3331 1112222222 121111112445554444 45544 456888888899999999888777777665
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHHHHHHHHHHHHhCCCcchhc
Q 012349 278 VTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLA 334 (465)
Q Consensus 278 ~gve~~galKNviAia~Gi~~gl~~g~~n~~a~li~~~~~E~~~l~~a~G~~~~t~~ 334 (465)
=.-...|.+-|.+ ......++.|...++++.|.+++.+.
T Consensus 167 G~g~~~Kl~~N~l------------------~~~~~~a~aEa~~la~~~Gld~~~~~ 205 (300)
T 3obb_A 167 GAGQVAKVCNNQL------------------LAVLMIGTAEAMALGVANGLEAKVLA 205 (300)
T ss_dssp THHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred cHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 3233344444421 12334678899999999999988764
No 65
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.50 E-value=6.4e-13 Score=135.83 Aligned_cols=150 Identities=13% Similarity=0.136 Sum_probs=104.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
+|||+|||+|.||..+|..|+++ | ++|++|+|+++.++.+ .+.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~-G-----~~V~v~dr~~~~~~~l---------~~~---------------------- 64 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKG-G-----HECVVYDLNVNAVQAL---------ERE---------------------- 64 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHH---------HTT----------------------
T ss_pred CCEEEEECchHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHHHH---------HHC----------------------
Confidence 48999999999999999999999 8 8999999998755431 110
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCC---CEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDA---DIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~a---DiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kG 199 (465)
++..++++++++.++ |+||++||+..++++++.+.+.+++ +++||.++++
T Consensus 65 ------------------------g~~~~~s~~e~~~~a~~~DvVi~~vp~~~v~~vl~~l~~~l~~---g~iiId~st~ 117 (358)
T 4e21_A 65 ------------------------GIAGARSIEEFCAKLVKPRVVWLMVPAAVVDSMLQRMTPLLAA---NDIVIDGGNS 117 (358)
T ss_dssp ------------------------TCBCCSSHHHHHHHSCSSCEEEECSCGGGHHHHHHHHGGGCCT---TCEEEECSSC
T ss_pred ------------------------CCEEeCCHHHHHhcCCCCCEEEEeCCHHHHHHHHHHHHhhCCC---CCEEEeCCCC
Confidence 123456778888888 9999999999999999999998876 6888888876
Q ss_pred ccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCC
Q 012349 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPH 268 (465)
Q Consensus 200 i~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g 268 (465)
....+ ..+.+.+.+ .|.......+..||..+. .|. .++++++++..+.++.+|+..+
T Consensus 118 ~~~~~------~~~~~~l~~-~g~~~vdapVsGg~~~a~---~G~--~im~GG~~~a~~~~~~ll~~lg 174 (358)
T 4e21_A 118 HYQDD------IRRADQMRA-QGITYVDVGTSGGIFGLE---RGY--CLMIGGEKQAVERLDPVFRTLA 174 (358)
T ss_dssp CHHHH------HHHHHHHHT-TTCEEEEEEEECGGGHHH---HCC--EEEEESCHHHHHHTHHHHHHHS
T ss_pred ChHHH------HHHHHHHHH-CCCEEEeCCCCCCHHHHh---cCC--eeeecCCHHHHHHHHHHHHHhc
Confidence 54321 111122222 121111234556665554 343 3567778877788888887655
No 66
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.48 E-value=9.3e-13 Score=132.59 Aligned_cols=183 Identities=15% Similarity=0.151 Sum_probs=117.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
.++||+|||+|.||++||..|+++ | ++|++|+++++.++++.. .+.+.. .++.+. .++++
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~-G-----~~V~l~d~~~~~~~~~~~-----~i~~~l---~~l~~~-G~~~g----- 64 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASG-G-----FRVKLYDIEPRQITGALE-----NIRKEM---KSLQQS-GSLKG----- 64 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSCHHHHHHHHH-----HHHHHH---HHHHHT-TCCCS-----
T ss_pred CCceEEEEeeCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHH-----HHHHHH---HHHHHc-Ccccc-----
Confidence 457999999999999999999999 8 899999999987765322 111100 000000 01111
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc--hHHHHHHHHHHhhhccCCCCEEEEeecc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~--~l~~vl~~l~~~l~~~~~~~ivIs~~kG 199 (465)
.+.++++ +.++++++|+++++.+||+||+|||.. ..+.+++++.+++++ +++|+|.+.|
T Consensus 65 ---~~~~~~~-------------~~~i~~~~~~~eav~~aDlVieavpe~~~~k~~v~~~l~~~~~~---~~Ii~s~tS~ 125 (319)
T 2dpo_A 65 ---SLSAEEQ-------------LSLISSCTNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDD---RVVLSSSSSC 125 (319)
T ss_dssp ---SSCHHHH-------------HHTEEEECCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCS---SSEEEECCSS
T ss_pred ---ccchHHH-------------hhceEEeCCHHHHHhcCCEEEEeccCCHHHHHHHHHHHHhhCCC---CeEEEEeCCC
Confidence 0000000 015788999999999999999999985 577889999998887 7888888888
Q ss_pred ccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEe--CChhHHHHHHHHHcCCCCeEEec-CC
Q 012349 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDN-GD 276 (465)
Q Consensus 200 i~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~--~~~~~~~~l~~ll~~~g~~v~~s-~D 276 (465)
+... .+.+.++.+ .++ +...|..+..+ .....++.+ .+++..+.++.+|+..|..+.+. .|
T Consensus 126 i~~~------------~la~~~~~~-~r~-ig~Hp~~P~~~--~~lveiv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~ 189 (319)
T 2dpo_A 126 LLPS------------KLFTGLAHV-KQC-IVAHPVNPPYY--IPLVELVPHPETSPATVDRTHALMRKIGQSPVRVLKE 189 (319)
T ss_dssp CCHH------------HHHTTCTTG-GGE-EEEEECSSTTT--CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEECSSC
T ss_pred hHHH------------HHHHhcCCC-CCe-EEeecCCchhh--cceEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEECCC
Confidence 7653 355555432 222 22334433322 222333334 46778899999999999877665 56
Q ss_pred hHH
Q 012349 277 LVT 279 (465)
Q Consensus 277 i~g 279 (465)
.-|
T Consensus 190 ~~G 192 (319)
T 2dpo_A 190 IDG 192 (319)
T ss_dssp CTT
T ss_pred cCC
Confidence 544
No 67
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.48 E-value=3.4e-13 Score=131.06 Aligned_cols=157 Identities=14% Similarity=0.110 Sum_probs=108.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~-V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
+|||+|||+|.||+++|..|++. | ++ |.+|+|+++.++++ .+. +
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~-g-----~~~v~~~~~~~~~~~~~---------~~~-------------~------- 54 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRK-G-----FRIVQVYSRTEESAREL---------AQK-------------V------- 54 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHH-T-----CCEEEEECSSHHHHHHH---------HHH-------------T-------
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC-C-----CeEEEEEeCCHHHHHHH---------HHH-------------c-------
Confidence 47999999999999999999998 7 77 99999998654431 100 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
++.+++++++++.++|+||+|||++.++++++++.+.+++ +++++++++|++
T Consensus 55 -------------------------g~~~~~~~~~~~~~~Dvvi~av~~~~~~~v~~~l~~~~~~---~~ivv~~s~~~~ 106 (266)
T 3d1l_A 55 -------------------------EAEYTTDLAEVNPYAKLYIVSLKDSAFAELLQGIVEGKRE---EALMVHTAGSIP 106 (266)
T ss_dssp -------------------------TCEEESCGGGSCSCCSEEEECCCHHHHHHHHHHHHTTCCT---TCEEEECCTTSC
T ss_pred -------------------------CCceeCCHHHHhcCCCEEEEecCHHHHHHHHHHHHhhcCC---CcEEEECCCCCc
Confidence 2345667777788999999999999999999999888766 689999999987
Q ss_pred ccccccccCCCHHHHHHhHhCCCC--ccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCCh
Q 012349 202 AELEAVPRIITPTQMINRATGVPI--ENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDL 277 (465)
Q Consensus 202 ~~~~~~~~~~~~se~I~e~lg~~~--~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di 277 (465)
.+. +.+.++.+. ++...++|+... ...+ ...+..+.+++..+.++++|+..|++++..++.
T Consensus 107 ~~~------------l~~~~~~~~~~~~~~~~~g~~~~--~~~~-~~~~v~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 169 (266)
T 3d1l_A 107 MNV------------WEGHVPHYGVFYPMQTFSKQREV--DFKE-IPFFIEASSTEDAAFLKAIASTLSNRVYDADSE 169 (266)
T ss_dssp GGG------------STTTCSSEEEEEECCCC---CCC--CCTT-CCEEEEESSHHHHHHHHHHHHTTCSCEEECCHH
T ss_pred hHH------------HHHHHHhccCcCCceecCCCchh--hcCC-CeEEEecCCHHHHHHHHHHHHhcCCcEEEeCHH
Confidence 651 333332110 011112232221 1222 222233567778899999999999888877764
No 68
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.41 E-value=7.9e-12 Score=120.88 Aligned_cols=152 Identities=16% Similarity=0.146 Sum_probs=108.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
++|||+|||+|.||.+++..|.+. | ++|.+|+|+++.++.+ .+. +
T Consensus 2 ~~m~i~iiG~G~mG~~~a~~l~~~-g-----~~v~~~~~~~~~~~~~---------~~~-------------~------- 46 (259)
T 2ahr_A 2 NAMKIGIIGVGKMASAIIKGLKQT-P-----HELIISGSSLERSKEI---------AEQ-------------L------- 46 (259)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTS-S-----CEEEEECSSHHHHHHH---------HHH-------------H-------
T ss_pred CccEEEEECCCHHHHHHHHHHHhC-C-----CeEEEECCCHHHHHHH---------HHH-------------c-------
Confidence 458999999999999999999987 7 8999999998654431 100 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
++..++++++++.++|+||+|||++.+++++..+. + +++++++++|+.
T Consensus 47 -------------------------g~~~~~~~~~~~~~~D~Vi~~v~~~~~~~v~~~l~----~---~~~vv~~~~~~~ 94 (259)
T 2ahr_A 47 -------------------------ALPYAMSHQDLIDQVDLVILGIKPQLFETVLKPLH----F---KQPIISMAAGIS 94 (259)
T ss_dssp -------------------------TCCBCSSHHHHHHTCSEEEECSCGGGHHHHHTTSC----C---CSCEEECCTTCC
T ss_pred -------------------------CCEeeCCHHHHHhcCCEEEEEeCcHhHHHHHHHhc----c---CCEEEEeCCCCC
Confidence 12234667788889999999999999988887653 3 568889988887
Q ss_pred ccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeC--ChhHHHHHHHHHcCCCCeEEecC
Q 012349 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICG--AEKWRKPLAKFLRRPHFTVWDNG 275 (465)
Q Consensus 202 ~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~--~~~~~~~l~~ll~~~g~~v~~s~ 275 (465)
.+ .+++.++.. .++ +...|+++..+..|. ..++.+. +++..+.++++|+..|..++..+
T Consensus 95 ~~------------~l~~~~~~~-~~~-v~~~p~~~~~~~~g~-~~i~~~~~~~~~~~~~~~~ll~~~G~~~~~~~ 155 (259)
T 2ahr_A 95 LQ------------RLATFVGQD-LPL-LRIMPNMNAQILQSS-TALTGNALVSQELQARVRDLTDSFGSTFDISE 155 (259)
T ss_dssp HH------------HHHHHHCTT-SCE-EEEECCGGGGGTCEE-EEEEECTTCCHHHHHHHHHHHHTTEEEEECCG
T ss_pred HH------------HHHHhcCCC-CCE-EEEcCCchHHHcCce-EEEEcCCCCCHHHHHHHHHHHHhCCCEEEecH
Confidence 64 356666532 233 457899988877763 3333443 56778999999999884344433
No 69
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.41 E-value=3.1e-12 Score=126.96 Aligned_cols=184 Identities=11% Similarity=0.139 Sum_probs=112.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
++||+|||+|.||++||..|+++ | ++|++|+++++.+++... .+.+.++.. .+.. .+.... |
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~-G-----~~V~~~d~~~~~~~~~~~-~i~~~l~~~-------~~~g-~~~~~~---~ 76 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT-G-----HTVVLVDQTEDILAKSKK-GIEESLRKV-------AKKK-FAENPK---A 76 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHH-HHHHHHHHH-------HHTT-SSSCHH---H
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHHHHH-HHHHHHHHH-------HHcC-CCCccc---c
Confidence 57899999999999999999998 8 899999999887665321 111000000 0000 000000 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcch--HHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE--TKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~--l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
. .+..++. ..++.+++|+++++.+||+||+|||.+. .+++++++.+++++ +++++|.++|+
T Consensus 77 ~-~~~~~~~-------------~~~i~~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~---~~iv~s~ts~i 139 (302)
T 1f0y_A 77 G-DEFVEKT-------------LSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAE---HTIFASNTSSL 139 (302)
T ss_dssp H-HHHHHHH-------------HHTEEEESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCT---TCEEEECCSSS
T ss_pred c-hhhHHHH-------------HhceEEecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCC---CeEEEECCCCC
Confidence 0 0000000 0146788999888999999999999864 67888999888876 68888899888
Q ss_pred cccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEe--CChhHHHHHHHHHcCCCCeEEecCCh
Q 012349 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGDL 277 (465)
Q Consensus 201 ~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~--~~~~~~~~l~~ll~~~g~~v~~s~Di 277 (465)
+.. .+.+.++.+ .++ +-..|..+..+ +....++.+ .+++..+.+.++|+..|..+....|.
T Consensus 140 ~~~------------~l~~~~~~~-~~~-~g~h~~~P~~~--~~~~~i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~~ 202 (302)
T 1f0y_A 140 QIT------------SIANATTRQ-DRF-AGLHFFNPVPV--MKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDT 202 (302)
T ss_dssp CHH------------HHHTTSSCG-GGE-EEEEECSSTTT--CCEEEEECCTTCCHHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CHH------------HHHHhcCCc-ccE-EEEecCCCccc--CceEEEeCCCCCCHHHHHHHHHHHHHcCCceEEecCc
Confidence 754 244444432 222 22223322222 222222223 26677889999999888776665553
No 70
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.41 E-value=1.9e-12 Score=127.29 Aligned_cols=164 Identities=16% Similarity=0.101 Sum_probs=109.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
+|||+|||+|+||+++|..|+++ |. +++|++|+|+++.++.+ .+. +.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-g~---~~~V~~~d~~~~~~~~~---------~~~---------------g~----- 52 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-HP---HYKIVGYNRSDRSRDIA---------LER---------------GI----- 52 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-CT---TSEEEEECSSHHHHHHH---------HHT---------------TS-----
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-CC---CcEEEEEcCCHHHHHHH---------HHc---------------CC-----
Confidence 58999999999999999999987 51 26899999987654421 100 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHh-hhccCCCCEEEEeecccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRY-WKERITVPVIISLAKGVE 201 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~-l~~~~~~~ivIs~~kGi~ 201 (465)
....++++++++.++|+||+|||++..+++++++.++ +++ +++|++++++-
T Consensus 53 ------------------------~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~l~~~~l~~---~~ivi~~~~~~- 104 (290)
T 3b1f_A 53 ------------------------VDEATADFKVFAALADVIILAVPIKKTIDFIKILADLDLKE---DVIITDAGSTK- 104 (290)
T ss_dssp ------------------------CSEEESCTTTTGGGCSEEEECSCHHHHHHHHHHHHTSCCCT---TCEEECCCSCH-
T ss_pred ------------------------cccccCCHHHhhcCCCEEEEcCCHHHHHHHHHHHHhcCCCC---CCEEEECCCCc-
Confidence 0134566667788999999999999999999999888 776 67776555332
Q ss_pred ccccccccCCCHHHHHHhHhCCCCccEE--------EEeCCchhh-hhhccCceEEEEe--CChhHHHHHHHHHcCCCCe
Q 012349 202 AELEAVPRIITPTQMINRATGVPIENIL--------YLGGPNIAS-EIYNKEYANARIC--GAEKWRKPLAKFLRRPHFT 270 (465)
Q Consensus 202 ~~~~~~~~~~~~se~I~e~lg~~~~~i~--------vlsGP~~a~-ev~~g~~t~~~~~--~~~~~~~~l~~ll~~~g~~ 270 (465)
.. ..+.+.+.++....++. ..+||+.+. ++..+.++.++.. .+++..+.++++|+..|++
T Consensus 105 ~~---------~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~G~~ 175 (290)
T 3b1f_A 105 YE---------IVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLTKPNTIPALQDLLSGLHAR 175 (290)
T ss_dssp HH---------HHHHHHHHHTTSSCEEEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTCCTTHHHHHHHHTGGGCCE
T ss_pred hH---------HHHHHHHhccccCCEEEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCCCHHHHHHHHHHHHHcCCE
Confidence 21 11345555542111111 123666554 4556655444442 4567789999999999999
Q ss_pred EEecCC
Q 012349 271 VWDNGD 276 (465)
Q Consensus 271 v~~s~D 276 (465)
++..++
T Consensus 176 ~~~~~~ 181 (290)
T 3b1f_A 176 YVEIDA 181 (290)
T ss_dssp EEECCH
T ss_pred EEEcCH
Confidence 877664
No 71
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.40 E-value=5.2e-12 Score=118.25 Aligned_cols=185 Identities=12% Similarity=0.170 Sum_probs=120.9
Q ss_pred ceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 44 LRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 44 mkIaIIG-aGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
|||+||| +|.||++++..|++. | ++|++|+|+++..+.+..+ + + .+++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~-g-----~~V~~~~r~~~~~~~~~~~-----~---~----------~~~~~------ 50 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL-G-----HEIVVGSRREEKAEAKAAE-----Y---R----------RIAGD------ 50 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT-T-----CEEEEEESSHHHHHHHHHH-----H---H----------HHHSS------
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHHH-----h---c----------ccccc------
Confidence 6899999 999999999999988 7 8999999997655432110 0 0 01110
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~ 202 (465)
..+. .++++++++++|+||+++|++.++++++++.+.++ +++++++++|+..
T Consensus 51 -----------------------~~~~-~~~~~~~~~~~D~Vi~~~~~~~~~~~~~~l~~~~~----~~~vi~~~~g~~~ 102 (212)
T 1jay_A 51 -----------------------ASIT-GMKNEDAAEACDIAVLTIPWEHAIDTARDLKNILR----EKIVVSPLVPVSR 102 (212)
T ss_dssp -----------------------CCEE-EEEHHHHHHHCSEEEECSCHHHHHHHHHHTHHHHT----TSEEEECCCCEEC
T ss_pred -----------------------CCCC-hhhHHHHHhcCCEEEEeCChhhHHHHHHHHHHHcC----CCEEEEcCCCcCc
Confidence 0233 35677778899999999999999999999888774 5799999999985
Q ss_pred ccccc--ccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhc-----cCceEEEEeCChhHHHHHHHHHcCC-CCeEEec
Q 012349 203 ELEAV--PRIITPTQMINRATGVPIENILYLGGPNIASEIYN-----KEYANARICGAEKWRKPLAKFLRRP-HFTVWDN 274 (465)
Q Consensus 203 ~~~~~--~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~-----g~~t~~~~~~~~~~~~~l~~ll~~~-g~~v~~s 274 (465)
++... .......+.+++.++. .+ .+...|+....... +..+.++.+.+++..+.++++|+.. |+.+...
T Consensus 103 ~~~~~~~~~g~~~~~~l~~~~~~--~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~l~~~~~G~~~~~~ 179 (212)
T 1jay_A 103 GAKGFTYSSERSAAEIVAEVLES--EK-VVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDA 179 (212)
T ss_dssp CTTCCEECCSSCHHHHHHHHHTC--SC-EEECCTTCCHHHHHCTTCCCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEE
T ss_pred CCceeecCCCCcHHHHHHHhCCC--Ce-EEEEccchHHHHhhCcCCCCCccEEEECCcHHHHHHHHHHHHHcCCCCceec
Confidence 31000 0011224567777752 23 23444444333222 2233222233467789999999999 9988777
Q ss_pred CChHHHHHHHHHHHH
Q 012349 275 GDLVTHEVMGGLKNV 289 (465)
Q Consensus 275 ~Di~gve~~galKNv 289 (465)
.++....|.+.+-|.
T Consensus 180 ~~~~~a~~~k~~~~~ 194 (212)
T 1jay_A 180 GPLSNSRLVESLTPL 194 (212)
T ss_dssp ESGGGHHHHHTHHHH
T ss_pred cchhHHHHhcchHHH
Confidence 776555665554443
No 72
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.39 E-value=1.7e-12 Score=122.92 Aligned_cols=165 Identities=11% Similarity=0.122 Sum_probs=113.4
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
+|||+|||+|.||++++..|++. | ++|++|+|+++..+.+ .+ .
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~-g-----~~V~~~~r~~~~~~~~---------~~---------------~------- 70 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGS-G-----FKVVVGSRNPKRTARL---------FP---------------S------- 70 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSHHHHHHH---------SB---------------T-------
T ss_pred CCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHH---------HH---------------c-------
Confidence 47999999999999999999988 7 8999999987643321 00 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~ 202 (465)
++..+ +.++++.++|+||+|+|++.++++++ +.+.+ + +++++++++|+..
T Consensus 71 ------------------------g~~~~-~~~~~~~~~DvVi~av~~~~~~~v~~-l~~~~-~---~~~vv~~s~g~~~ 120 (215)
T 2vns_A 71 ------------------------AAQVT-FQEEAVSSPEVIFVAVFREHYSSLCS-LSDQL-A---GKILVDVSNPTEQ 120 (215)
T ss_dssp ------------------------TSEEE-EHHHHTTSCSEEEECSCGGGSGGGGG-GHHHH-T---TCEEEECCCCCHH
T ss_pred ------------------------CCcee-cHHHHHhCCCEEEECCChHHHHHHHH-HHHhc-C---CCEEEEeCCCccc
Confidence 12333 66778899999999999988888776 76665 4 6899999999876
Q ss_pred cccccccCCCHHHHHHhHhCCCCccEEE----EeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCChH
Q 012349 203 ELEAVPRIITPTQMINRATGVPIENILY----LGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLV 278 (465)
Q Consensus 203 ~~~~~~~~~~~se~I~e~lg~~~~~i~v----lsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~ 278 (465)
.... ......+++.+.++. .++.. ++++.++..+..+.......+.+++..+.++++|+..|++++...++.
T Consensus 121 ~~l~--~~~~~~~~l~~~l~~--~~vv~~~n~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~~ll~~~G~~~~~~g~~~ 196 (215)
T 2vns_A 121 EHLQ--HRESNAEYLASLFPT--CTVVKAFNVISAWTLQAGPRDGNRQVPICGDQPEAKRAVSEMALAMGFMPVDMGSLA 196 (215)
T ss_dssp HHHH--CSSCHHHHHHHHCTT--SEEEEECTTBCHHHHHTCSCSSCCEEEEEESCHHHHHHHHHHHHHTTCEEEECCSGG
T ss_pred cccc--ccccHHHHHHHHCCC--CeEEeccccccHhHhcccccCCceeEEEecCCHHHHHHHHHHHHHcCCceEeecchh
Confidence 4210 113455777777752 23211 122222222323433333445677888999999999999999888863
No 73
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.38 E-value=1.9e-12 Score=127.37 Aligned_cols=153 Identities=16% Similarity=0.134 Sum_probs=108.9
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 43 ~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
+|||+|||+ |+||+++|..|+++ | ++|++|+|+++.++.+ .+. +
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~-g-----~~V~~~~r~~~~~~~~---------~~~---------------g----- 55 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS-A-----HHLAAIEIAPEGRDRL---------QGM---------------G----- 55 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS-S-----SEEEEECCSHHHHHHH---------HHT---------------T-----
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-C-----CEEEEEECCHHHHHHH---------Hhc---------------C-----
Confidence 579999999 99999999999988 7 8999999987654431 100 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
+..+ +..+++.++|+||+|||++.++++++++.+.+++ +++|+++++|++
T Consensus 56 --------------------------~~~~-~~~~~~~~aDvVi~av~~~~~~~v~~~l~~~l~~---~~ivv~~s~~~~ 105 (286)
T 3c24_A 56 --------------------------IPLT-DGDGWIDEADVVVLALPDNIIEKVAEDIVPRVRP---GTIVLILDAAAP 105 (286)
T ss_dssp --------------------------CCCC-CSSGGGGTCSEEEECSCHHHHHHHHHHHGGGSCT---TCEEEESCSHHH
T ss_pred --------------------------CCcC-CHHHHhcCCCEEEEcCCchHHHHHHHHHHHhCCC---CCEEEECCCCch
Confidence 1111 3446678999999999999999999999988876 688999998875
Q ss_pred ccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhh--------hhccCce------EE-E-EeCChhHHHHHHHHHc
Q 012349 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE--------IYNKEYA------NA-R-ICGAEKWRKPLAKFLR 265 (465)
Q Consensus 202 ~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~e--------v~~g~~t------~~-~-~~~~~~~~~~l~~ll~ 265 (465)
.. .+.+..+ ..+ .+...|+++.+ +..|.++ .+ . .+.+++..+.++++|+
T Consensus 106 ~~------------~l~~~~~--~~~-~v~~~P~~~~~~~~~~~~~~~~g~l~~~~~~~~i~~~~~~~~~~~~~v~~l~~ 170 (286)
T 3c24_A 106 YA------------GVMPERA--DIT-YFIGHPCHPPLFNDETDPAARTDYHGGIAKQAIVCALMQGPEEHYAIGADICE 170 (286)
T ss_dssp HH------------TCSCCCT--TSE-EEEEEECCSCSSCCCCSHHHHTCSSSSSSCEEEEEEEEESCTHHHHHHHHHHH
T ss_pred hH------------HHHhhhC--CCe-EEecCCCCccccccccchhhccCcccccccceeeeeccCCCHHHHHHHHHHHH
Confidence 43 1222111 112 34477877655 5666422 12 2 2456778899999999
Q ss_pred CCCC---eEEecC
Q 012349 266 RPHF---TVWDNG 275 (465)
Q Consensus 266 ~~g~---~v~~s~ 275 (465)
..|. +++..+
T Consensus 171 ~~G~~~~~~~~v~ 183 (286)
T 3c24_A 171 TMWSPVTRTHRVT 183 (286)
T ss_dssp HHTCSEEEEEECC
T ss_pred HhcCCcceEEEeC
Confidence 9998 666554
No 74
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.37 E-value=1.3e-11 Score=123.84 Aligned_cols=162 Identities=16% Similarity=0.123 Sum_probs=108.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCe--eEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~--~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
.+|||+|||+|.||+++|..|.+. | + +|++|+|+++.++.. .+. +.
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~-G-----~~~~V~~~dr~~~~~~~a---------~~~---------------G~-- 79 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRS-G-----FKGKIYGYDINPESISKA---------VDL---------------GI-- 79 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHT-T-----CCSEEEEECSCHHHHHHH---------HHT---------------TS--
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC-C-----CCCEEEEEECCHHHHHHH---------HHC---------------CC--
Confidence 358999999999999999999998 7 6 899999998654421 000 00
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHH-HhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeec
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQE-AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~e-al~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~k 198 (465)
....++++++ ++.++|+||+|||++.+.++++++.+++++ +++|++++
T Consensus 80 ---------------------------~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~~l~~~l~~---~~iv~d~~- 128 (314)
T 3ggo_A 80 ---------------------------IDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAKKLSYILSE---DATVTDQG- 128 (314)
T ss_dssp ---------------------------CSEEESCTTGGGGGCCSEEEECSCGGGHHHHHHHHHHHSCT---TCEEEECC-
T ss_pred ---------------------------cchhcCCHHHHhhccCCEEEEeCCHHHHHHHHHHHhhccCC---CcEEEECC-
Confidence 0134567777 789999999999999999999999998876 67777665
Q ss_pred cccccccccccCCCHHHHHHhHhCCC---CccE--EEEeCCchhh-hhhccCceEEEEe--CChhHHHHHHHHHcCCCCe
Q 012349 199 GVEAELEAVPRIITPTQMINRATGVP---IENI--LYLGGPNIAS-EIYNKEYANARIC--GAEKWRKPLAKFLRRPHFT 270 (465)
Q Consensus 199 Gi~~~~~~~~~~~~~se~I~e~lg~~---~~~i--~vlsGP~~a~-ev~~g~~t~~~~~--~~~~~~~~l~~ll~~~g~~ 270 (465)
++... +.+.+.+.++.. .+|+ ...+||..+. ++..|.+..++.. .+++..+.++++|+..|.+
T Consensus 129 Svk~~---------~~~~~~~~l~~~~v~~hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~~~~~~~~~v~~l~~~~G~~ 199 (314)
T 3ggo_A 129 SVKGK---------LVYDLENILGKRFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGV 199 (314)
T ss_dssp SCCTH---------HHHHHHHHHGGGEECEEECCCCCCCSGGGCCTTTTTTCEEEECCCTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCcHH---------HHHHHHHhcCCCEEecCcccCCcccchhhhhhhhhcCCEEEEEeCCCCCHHHHHHHHHHHHHcCCE
Confidence 32211 123344433211 1121 1223454444 2345655443332 3567889999999999988
Q ss_pred EEecC
Q 012349 271 VWDNG 275 (465)
Q Consensus 271 v~~s~ 275 (465)
++..+
T Consensus 200 v~~~~ 204 (314)
T 3ggo_A 200 VEYMS 204 (314)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 76654
No 75
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.37 E-value=1.6e-11 Score=121.98 Aligned_cols=154 Identities=21% Similarity=0.201 Sum_probs=102.9
Q ss_pred CceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 43 PLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 43 ~mkIaIIG-aGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
++||+||| +|+||+++|..|++. | ++|++|+|+++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~-G-----~~V~~~~~~~~~------------------------------------- 57 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRAS-G-----YPISILDREDWA------------------------------------- 57 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTT-T-----CCEEEECTTCGG-------------------------------------
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhC-C-----CeEEEEECCccc-------------------------------------
Confidence 46899999 999999999999988 7 899999876520
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
+..+++.++|+||+|||++.+.++++++.+++++ +++|+.+ .|+.
T Consensus 58 -------------------------------~~~~~~~~aDvVilavp~~~~~~vl~~l~~~l~~---~~iv~~~-~svk 102 (298)
T 2pv7_A 58 -------------------------------VAESILANADVVIVSVPINLTLETIERLKPYLTE---NMLLADL-TSVK 102 (298)
T ss_dssp -------------------------------GHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCT---TSEEEEC-CSCC
T ss_pred -------------------------------CHHHHhcCCCEEEEeCCHHHHHHHHHHHHhhcCC---CcEEEEC-CCCC
Confidence 1234567899999999999999999999988876 5655444 4543
Q ss_pred ccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCChHHHH
Q 012349 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVTHE 281 (465)
Q Consensus 202 ~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~gve 281 (465)
.. ..+.+.+..+....+..-+.||.. +...+.++.++.+.+++..+.++++|+..|++++..++....+
T Consensus 103 ~~---------~~~~~~~~~~~~~v~~hP~~g~~~--~~~~g~~~~l~~~~~~~~~~~v~~l~~~~G~~~~~~~~~~~d~ 171 (298)
T 2pv7_A 103 RE---------PLAKMLEVHTGAVLGLHPMFGADI--ASMAKQVVVRCDGRFPERYEWLLEQIQIWGAKIYQTNATEHDH 171 (298)
T ss_dssp HH---------HHHHHHHHCSSEEEEEEECSCTTC--SCCTTCEEEEEEEECGGGTHHHHHHHHHTTCEEEECCHHHHHH
T ss_pred cH---------HHHHHHHhcCCCEEeeCCCCCCCc--hhhcCCeEEEecCCCHHHHHHHHHHHHHcCCEEEECCHHHHHH
Confidence 32 112333333311000011345543 2334554434433466778899999999999988776544444
Q ss_pred HHHH
Q 012349 282 VMGG 285 (465)
Q Consensus 282 ~~ga 285 (465)
+.+.
T Consensus 172 ~~a~ 175 (298)
T 2pv7_A 172 NMTY 175 (298)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 76
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.34 E-value=2.4e-11 Score=119.66 Aligned_cols=182 Identities=14% Similarity=0.156 Sum_probs=115.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
++||+|||+|.||+++|..|+.+ | ++|++|+++++.+++... .++... ..+.+... .+.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~-G-----~~V~l~d~~~~~~~~~~~-----~i~~~~---------~~~~~~g~-~~~ 62 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH-G-----FAVTAYDINTDALDAAKK-----RFEGLA---------AVYEKEVA-GAA 62 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSHHHHHHHHH-----HHHHHH---------HHHHHHST-TCT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CeEEEEeCCHHHHHHHHH-----HHHHHH---------HHHHHhcc-cCC
Confidence 47999999999999999999999 8 899999999887665322 111110 00110000 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc--hHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~--~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
.... ++. ...+..++|+++++.++|+||+|||++ ..+++++++.+++++ ++++++.+.++
T Consensus 63 ~~~~--~~~-------------~~~i~~~~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~---~~il~s~tS~~ 124 (283)
T 4e12_A 63 DGAA--QKA-------------LGGIRYSDDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPA---KTIFATNSSTL 124 (283)
T ss_dssp TTHH--HHH-------------HHHCEEESCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCT---TCEEEECCSSS
T ss_pred HHHH--HHH-------------HcCeEEeCCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCC---CcEEEECCCCC
Confidence 0000 000 013567899988899999999999998 889999999998887 78888888887
Q ss_pred cccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEe--CChhHHHHHHHHHcCCCCeEEec-CCh
Q 012349 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDN-GDL 277 (465)
Q Consensus 201 ~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~--~~~~~~~~l~~ll~~~g~~v~~s-~Di 277 (465)
... .+.+.++.+ .++. -..|..+. ..+....++.+ .+++..+.++++++..+...... .|.
T Consensus 125 ~~~------------~la~~~~~~-~~~i-g~h~~~p~--~~~~lvevv~~~~t~~~~~~~~~~l~~~~g~~~v~v~~~~ 188 (283)
T 4e12_A 125 LPS------------DLVGYTGRG-DKFL-ALHFANHV--WVNNTAEVMGTTKTDPEVYQQVVEFASAIGMVPIELKKEK 188 (283)
T ss_dssp CHH------------HHHHHHSCG-GGEE-EEEECSST--TTSCEEEEEECTTSCHHHHHHHHHHHHHTTCEEEECSSCC
T ss_pred CHH------------HHHhhcCCC-cceE-EEccCCCc--ccCceEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 543 345555433 2321 11222221 22233333333 25677889999999888776655 564
Q ss_pred HH
Q 012349 278 VT 279 (465)
Q Consensus 278 ~g 279 (465)
-|
T Consensus 189 ~g 190 (283)
T 4e12_A 189 AG 190 (283)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 77
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.33 E-value=2.9e-11 Score=127.13 Aligned_cols=177 Identities=10% Similarity=0.064 Sum_probs=113.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
++||+|||+|.||+.||..|+++ | ++|++|+++++.....-.+.+....+.+ .+.....
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a-G-----~~V~l~D~~~e~a~~~i~~~l~~~~~~G------------~l~~~~~--- 112 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA-G-----IETFLVVRNEQRCKQELEVMYAREKSFK------------RLNDKRI--- 112 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHHHHHHHHHHTT------------SCCHHHH---
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-C-----CeEEEEECcHHHHHHHHHHHHHHHHHcC------------CCCHHHH---
Confidence 47999999999999999999999 8 9999999998732210011111111111 1110000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc--hHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~--~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
+ .+ +.++++++|++ ++.+||+||+|||.+ ..+++++++.+++++ +++++|.+.++
T Consensus 113 ~-~~------------------~~~i~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~---~aIlasnTSsl 169 (460)
T 3k6j_A 113 E-KI------------------NANLKITSDFH-KLSNCDLIVESVIEDMKLKKELFANLENICKS---TCIFGTNTSSL 169 (460)
T ss_dssp H-HH------------------HTTEEEESCGG-GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCT---TCEEEECCSSS
T ss_pred H-HH------------------hcceEEeCCHH-HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCC---CCEEEecCCCh
Confidence 0 00 12578889985 689999999999975 567889999999887 78888888777
Q ss_pred cccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEe--CChhHHHHHHHHHcCCCCeEEecCChH
Q 012349 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGDLV 278 (465)
Q Consensus 201 ~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~--~~~~~~~~l~~ll~~~g~~v~~s~Di~ 278 (465)
... .+.+.+..+ .++.. .-|-.+.. ......++.+ .+++..+.+.++++..|..+....|.-
T Consensus 170 ~i~------------~ia~~~~~p-~r~iG-~HffnPv~--~m~LvEIv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~p 233 (460)
T 3k6j_A 170 DLN------------EISSVLRDP-SNLVG-IHFFNPAN--VIRLVEIIYGSHTSSQAIATAFQACESIKKLPVLVGNCK 233 (460)
T ss_dssp CHH------------HHHTTSSSG-GGEEE-EECCSSTT--TCCEEEEECCSSCCHHHHHHHHHHHHHTTCEEEEESSCC
T ss_pred hHH------------HHHHhccCC-cceEE-EEecchhh--hCCEEEEEeCCCCCHHHHHHHHHHHHHhCCEEEEEeccc
Confidence 653 355555433 22221 11211221 2222333333 367788999999999998888778865
Q ss_pred H
Q 012349 279 T 279 (465)
Q Consensus 279 g 279 (465)
|
T Consensus 234 G 234 (460)
T 3k6j_A 234 S 234 (460)
T ss_dssp H
T ss_pred H
Confidence 5
No 78
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.98 E-value=1.9e-13 Score=128.63 Aligned_cols=160 Identities=13% Similarity=0.096 Sum_probs=108.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
.|||+|||+|+||+++|..|.+. | ++|++|+|+++ .+. +..
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~-G-----~~V~~~~r~~~-~~~--------------------------~~~------ 59 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQC-G-----YSVVFGSRNPQ-VSS--------------------------LLP------ 59 (201)
Confidence 37899999999999999999988 7 89999999864 221 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~ 202 (465)
..+.++ ++.++++++|+||++||++.+++++ ++.+.. + +++||++++|+..
T Consensus 60 -----------------------~g~~~~-~~~~~~~~aDvVilav~~~~~~~v~-~l~~~~-~---~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 60 -----------------------RGAEVL-CYSEAASRSDVIVLAVHREHYDFLA-ELADSL-K---GRVLIDVSNNQKM 110 (201)
Confidence 012223 4556778899999999999998887 565543 3 5789999999963
Q ss_pred cccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhc-cCc----eEEEEeCChhHHHHHHHHHcCCCCeEEecCCh
Q 012349 203 ELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYN-KEY----ANARICGAEKWRKPLAKFLRRPHFTVWDNGDL 277 (465)
Q Consensus 203 ~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~-g~~----t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di 277 (465)
... ...-.+.+.+.++. . ..+...|+++..... |.. +.++.+.+++..+.++++|+..|++++...++
T Consensus 111 ~~~----~~~~~~~l~~~~~~--~-~vvra~~n~~a~~~~~g~l~g~~~~~~~g~~~~~~~~v~~ll~~~G~~~~~~G~l 183 (201)
T 2yjz_A 111 NQY----PESNAEYLAQLVPG--A-HVVKAFNTISAWALQSGTLDASRQVFVCGNDSKAKDRVMDIARTLGLTPLDQGSL 183 (201)
Confidence 100 00011445555542 1 245677887776554 331 22334445667788999999999988777665
No 79
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.28 E-value=1.6e-12 Score=127.65 Aligned_cols=178 Identities=13% Similarity=0.042 Sum_probs=98.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V-~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
+|||+|||+|+||++++..|+++ ++| .+|+|+++.++++ ... +
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~-------~~v~~v~~~~~~~~~~~---------~~~-------------~------- 45 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR-------YEIGYILSRSIDRARNL---------AEV-------------Y------- 45 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-----------CCCEECSSHHHHHHH---------HHH-------------T-------
T ss_pred CceEEEEeCCHHHHHHHHHHHHc-------CcEEEEEeCCHHHHHHH---------HHH-------------c-------
Confidence 47999999999999999988754 577 5999987654431 000 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
+. .+++++++++++|+||+|||++.+.++++++. .+ +++||+++.++.
T Consensus 46 -------------------------g~-~~~~~~~~~~~~DvVilav~~~~~~~v~~~l~---~~---~~ivi~~s~~~~ 93 (276)
T 2i76_A 46 -------------------------GG-KAATLEKHPELNGVVFVIVPDRYIKTVANHLN---LG---DAVLVHCSGFLS 93 (276)
T ss_dssp -------------------------CC-CCCSSCCCCC---CEEECSCTTTHHHHHTTTC---CS---SCCEEECCSSSC
T ss_pred -------------------------CC-ccCCHHHHHhcCCEEEEeCChHHHHHHHHHhc---cC---CCEEEECCCCCc
Confidence 11 23444555678999999999999999988775 33 578888886765
Q ss_pred ccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecC--ChHH
Q 012349 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNG--DLVT 279 (465)
Q Consensus 202 ~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~--Di~g 279 (465)
.+ .+++......+++..++||....+...+.+. .++.+++..+.++++|+..|.+++... |...
T Consensus 94 ~~------------~l~~~~~~~~~p~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~lG~~~~~v~~~~~~~ 159 (276)
T 2i76_A 94 SE------------IFKKSGRASIHPNFSFSSLEKALEMKDQIVF--GLEGDERGLPIVKKIAEEISGKYFVIPSEKKKA 159 (276)
T ss_dssp GG------------GGCSSSEEEEEECSCC--CTTGGGCGGGCCE--EECCCTTTHHHHHHHHHHHCSCEEECCGGGHHH
T ss_pred HH------------HHHHhhccccchhhhcCCCchhHHHhCCCeE--EEEeChHHHHHHHHHHHHhCCCEEEECHHHHHH
Confidence 43 1222111001122234554443333334322 334455557778888887775544433 2211
Q ss_pred -----HHHHHHHHHHHHHHHHhhhcccC
Q 012349 280 -----HEVMGGLKNVYAIGAGMVAALTN 302 (465)
Q Consensus 280 -----ve~~galKNviAia~Gi~~gl~~ 302 (465)
.-.+..+.++++.+..+....++
T Consensus 160 ~~~~~~l~~n~~~~~~~~a~~~~~~~Gl 187 (276)
T 2i76_A 160 YHLAAVIASNFPVALAYLSKRIYTLLGL 187 (276)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 22233455666666666655554
No 80
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.22 E-value=1.4e-10 Score=122.87 Aligned_cols=180 Identities=15% Similarity=0.139 Sum_probs=115.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
.+||+|||+|.||++||..|+++ | ++|++|+++++.+++... .+...+++.. +.. .+....
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a-G-----~~V~l~D~~~e~l~~~~~-~i~~~l~~~~-------~~g-~~~~~~---- 65 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH-G-----HQVLLYDISAEALTRAID-GIHARLNSRV-------TRG-KLTAET---- 65 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSCHHHHHHHHH-HHHHHHHTTT-------TTT-SSCHHH----
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-C-----CeEEEEECCHHHHHHHHH-HHHHHHHHHH-------HcC-CCCHHH----
Confidence 47999999999999999999998 8 899999999987765322 1111111100 000 010000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc--hHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~--~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
.+++ +.+++.++|++ ++++||+||+|||++ ..+++++++.+++++ +++++|.+.++
T Consensus 66 -----~~~~-------------~~~i~~~~~~~-~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~---~~IlasntSti 123 (483)
T 3mog_A 66 -----CERT-------------LKRLIPVTDIH-ALAAADLVIEAASERLEVKKALFAQLAEVCPP---QTLLTTNTSSI 123 (483)
T ss_dssp -----HHHH-------------HHTEEEECCGG-GGGGCSEEEECCCCCHHHHHHHHHHHHHHSCT---TCEEEECCSSS
T ss_pred -----HHHH-------------HhceeEeCCHH-HhcCCCEEEEcCCCcHHHHHHHHHHHHHhhcc---CcEEEecCCCC
Confidence 0000 02577888885 689999999999987 567899999998887 78888888888
Q ss_pred cccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEe--CChhHHHHHHHHHcCCCCeEEecCChH
Q 012349 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGDLV 278 (465)
Q Consensus 201 ~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~--~~~~~~~~l~~ll~~~g~~v~~s~Di~ 278 (465)
... .+.+.+..+ .++ +-..|..+..+. ....++.+ .+++..+.+.++++..|..+....|.-
T Consensus 124 ~i~------------~ia~~~~~p-~~~-ig~hf~~Pa~v~--~Lvevv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~~ 187 (483)
T 3mog_A 124 SIT------------AIAAEIKNP-ERV-AGLHFFNPAPVM--KLVEVVSGLATAAEVVEQLCELTLSWGKQPVRCHSTP 187 (483)
T ss_dssp CHH------------HHTTTSSSG-GGE-EEEEECSSTTTC--CEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CHH------------HHHHHccCc-cce-EEeeecChhhhC--CeEEEecCCCCCHHHHHHHHHHHHHhCCEEEEEeccC
Confidence 654 355545432 222 122233322322 22333333 266788999999999888777666764
Q ss_pred H
Q 012349 279 T 279 (465)
Q Consensus 279 g 279 (465)
|
T Consensus 188 G 188 (483)
T 3mog_A 188 G 188 (483)
T ss_dssp T
T ss_pred c
Confidence 4
No 81
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.19 E-value=2.2e-10 Score=127.00 Aligned_cols=178 Identities=15% Similarity=0.169 Sum_probs=112.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
++||+|||+|.||+.||..|+++ | ++|++|+++++.+++.... +.+.+.+.. +. .+++...
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~a-G-----~~V~l~D~~~~~~~~~~~~-i~~~l~~~~-------~~-G~~~~~~---- 372 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILS-N-----YPVILKEVNEKFLEAGIGR-VKANLQSRV-------RK-GSMSQEK---- 372 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSSHHHHHHHHHH-HHHHHHHTT-------C-----CTTH----
T ss_pred CcEEEEEcCCHhhHHHHHHHHhC-C-----CEEEEEECCHHHHHHHHHH-HHHHHHHHH-------hc-CCCCHHH----
Confidence 57899999999999999999998 8 9999999999876653211 111111000 00 0111000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcch--HHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE--TKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~--l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
. +..+..++.++|+ +++.+||+||+|||.+. .++++.++.+++++ ++++++.++++
T Consensus 373 ---~---------------~~~~~~i~~~~d~-~~~~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~---~~IlasntStl 430 (725)
T 2wtb_A 373 ---F---------------EKTMSLLKGSLDY-ESFRDVDMVIEAVIENISLKQQIFADLEKYCPQ---HCILASNTSTI 430 (725)
T ss_dssp ---H---------------HHTTTSEEEESSS-GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCT---TCEEEECCSSS
T ss_pred ---H---------------HHHhcceEEeCCH-HHHCCCCEEEEcCcCCHHHHHHHHHHHHhhCCC---CcEEEeCCCCC
Confidence 0 0001257788888 57899999999999875 67888999998887 78888888887
Q ss_pred cccccccccCCCHHHHHHhHhCCCCccEE--EEeCCchhhhhhccCceEEEEe--CChhHHHHHHHHHcCCCCeEEecCC
Q 012349 201 EAELEAVPRIITPTQMINRATGVPIENIL--YLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGD 276 (465)
Q Consensus 201 ~~~~~~~~~~~~~se~I~e~lg~~~~~i~--vlsGP~~a~ev~~g~~t~~~~~--~~~~~~~~l~~ll~~~g~~v~~s~D 276 (465)
+.. + +.+.+..+ .++. ....|.. ......++.+ .+++..+.+..+++..|..+.+..|
T Consensus 431 ~i~-----------~-la~~~~~p-~~~iG~hf~~P~~-----~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~d 492 (725)
T 2wtb_A 431 DLN-----------K-IGERTKSQ-DRIVGAHFFSPAH-----IMPLLEIVRTNHTSAQVIVDLLDVGKKIKKTPVVVGN 492 (725)
T ss_dssp CHH-----------H-HTTTCSCT-TTEEEEEECSSTT-----TCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CHH-----------H-HHHHhcCC-CCEEEecCCCCcc-----cCceEEEEECCCCCHHHHHHHHHHHHHhCCEEEEECC
Confidence 654 2 44444322 1221 1122321 1122223333 2667788999999988887777667
Q ss_pred hHH
Q 012349 277 LVT 279 (465)
Q Consensus 277 i~g 279 (465)
..|
T Consensus 493 ~~G 495 (725)
T 2wtb_A 493 CTG 495 (725)
T ss_dssp STT
T ss_pred Ccc
Confidence 544
No 82
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.19 E-value=1.6e-10 Score=117.02 Aligned_cols=181 Identities=17% Similarity=0.191 Sum_probs=118.1
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhcC
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (465)
|||+|||+|+||+++|..|.+. | ++|++|+|+++.... ....
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~-G-----~~V~~~~~~~~~~~~--------~a~~------------------------ 58 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDS-G-----VDVTVGLRSGSATVA--------KAEA------------------------ 58 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECCTTCHHHH--------HHHH------------------------
T ss_pred CEEEEECchHHHHHHHHHHHHC-c-----CEEEEEECChHHHHH--------HHHH------------------------
Confidence 6899999999999999999988 7 889999998643111 0000
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHH-HHHHhhhccCCCCEEEEeeccccc
Q 012349 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFE-EISRYWKERITVPVIISLAKGVEA 202 (465)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~-~l~~~l~~~~~~~ivIs~~kGi~~ 202 (465)
.++.++ ++++++.++|+||+|||++...++++ ++.+++++ +++|+++ +|+..
T Consensus 59 ----------------------~G~~~~-~~~e~~~~aDvVilavp~~~~~~v~~~~i~~~l~~---~~ivi~~-~gv~~ 111 (338)
T 1np3_A 59 ----------------------HGLKVA-DVKTAVAAADVVMILTPDEFQGRLYKEEIEPNLKK---GATLAFA-HGFSI 111 (338)
T ss_dssp ----------------------TTCEEE-CHHHHHHTCSEEEECSCHHHHHHHHHHHTGGGCCT---TCEEEES-CCHHH
T ss_pred ----------------------CCCEEc-cHHHHHhcCCEEEEeCCcHHHHHHHHHHHHhhCCC---CCEEEEc-CCchh
Confidence 023344 77788899999999999999999998 99988876 6777755 67543
Q ss_pred cccccccCCCHHHHHHhHhCCCCccEE--EEeCCchhh-hhh---ccCceEEEEe--CChhHHHHHHHHHcCCCC-e--E
Q 012349 203 ELEAVPRIITPTQMINRATGVPIENIL--YLGGPNIAS-EIY---NKEYANARIC--GAEKWRKPLAKFLRRPHF-T--V 271 (465)
Q Consensus 203 ~~~~~~~~~~~se~I~e~lg~~~~~i~--vlsGP~~a~-ev~---~g~~t~~~~~--~~~~~~~~l~~ll~~~g~-~--v 271 (465)
. +.+........+. .-+||+++. ++. .|.+..++.. .+.+..+.+.++++..|. + +
T Consensus 112 ~-------------~~~~~~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~~~~~a~~~~~~l~~~lG~~~agv 178 (338)
T 1np3_A 112 H-------------YNQVVPRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQDASGNAKNVALSYACGVGGGRTGI 178 (338)
T ss_dssp H-------------TTSSCCCTTCEEEEEEESSCSHHHHHHHHTTCCCCEEEEEEECSSSCHHHHHHHHHHHTTHHHHCE
T ss_pred H-------------HHhhcCCCCcEEEeccCCCCchhHHHHHhccCCCeEEEEecCCCCHHHHHHHHHHHHHcCCCccce
Confidence 1 1121111111111 125676653 333 3776654542 345566778888888787 4 4
Q ss_pred Eec-------CChHHHH--HHHHHHHHHHHHHHhhhcccC
Q 012349 272 WDN-------GDLVTHE--VMGGLKNVYAIGAGMVAALTN 302 (465)
Q Consensus 272 ~~s-------~Di~gve--~~galKNviAia~Gi~~gl~~ 302 (465)
... .|..+.. +||.+.++++.+...+...++
T Consensus 179 ~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~Gl 218 (338)
T 1np3_A 179 IETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGY 218 (338)
T ss_dssp EECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTC
T ss_pred EeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcCC
Confidence 333 2344433 688899998887755544444
No 83
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.18 E-value=2.5e-10 Score=114.85 Aligned_cols=182 Identities=14% Similarity=0.142 Sum_probs=117.0
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 41 ~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
....||+|||+|.||+.||..++.+ | ++|++|+++++.+++... .+...+... .+.. .++.
T Consensus 4 p~~~~VaViGaG~MG~giA~~~a~~-G-----~~V~l~D~~~~~l~~~~~-~i~~~l~~~-------~~~g-~~~~---- 64 (319)
T 3ado_A 4 PAAGDVLIVGSGLVGRSWAMLFASG-G-----FRVKLYDIEPRQITGALE-NIRKEMKSL-------QQSG-SLKG---- 64 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSCHHHHHHHHH-HHHHHHHHH-------HHTT-CCCS----
T ss_pred CCCCeEEEECCcHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHHHHH-HHHHHHHHH-------HHcC-CCCC----
Confidence 3457999999999999999999999 8 899999999887664221 111111110 0000 0110
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc--hHHHHHHHHHHhhhccCCCCEEEEeec
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~--~l~~vl~~l~~~l~~~~~~~ivIs~~k 198 (465)
.+..++. +..+..++|+++++.+||+||.|||.. ..++++.+|.+++++ ++++.|.|.
T Consensus 65 ----~~~~~~~-------------l~~i~~~~~l~~a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~---~aIlaSNTS 124 (319)
T 3ado_A 65 ----SLSAEEQ-------------LSLISSCTNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDD---RVVLSSSSS 124 (319)
T ss_dssp ----SSCHHHH-------------HHTEEEECCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCS---SSEEEECCS
T ss_pred ----ccCHHHH-------------HhhcccccchHhHhccCcEEeeccccHHHHHHHHHHHHHHHhhh---cceeehhhh
Confidence 0000000 125788999999999999999999976 678999999999987 799989998
Q ss_pred cccccccccccCCCHHHHHHhHhCCCCccEEEE--eCCchhhhhhccCceEEEEe--CChhHHHHHHHHHcCCCCeE-Ee
Q 012349 199 GVEAELEAVPRIITPTQMINRATGVPIENILYL--GGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTV-WD 273 (465)
Q Consensus 199 Gi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vl--sGP~~a~ev~~g~~t~~~~~--~~~~~~~~l~~ll~~~g~~v-~~ 273 (465)
|+... + |.+.+..| .++... ..|-+.. ....++.+ .+++..+.+.+++...|... .+
T Consensus 125 sl~is-----------~-ia~~~~~p-~r~ig~HffNP~~~m-----~LVEiv~g~~Ts~~~~~~~~~~~~~~gk~pv~v 186 (319)
T 3ado_A 125 CLLPS-----------K-LFTGLAHV-KQCIVAHPVNPPYYI-----PLVELVPHPETSPATVDRTHALMRKIGQSPVRV 186 (319)
T ss_dssp SCCHH-----------H-HHTTCTTG-GGEEEEEECSSTTTC-----CEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred hccch-----------h-hhhhccCC-CcEEEecCCCCcccc-----chHHhcCCCCCcHHHHHHHHHHHHHhCCccCCc
Confidence 88764 3 55555443 343322 2232221 12223333 35677888889998888665 46
Q ss_pred cCChHH
Q 012349 274 NGDLVT 279 (465)
Q Consensus 274 s~Di~g 279 (465)
..|.-|
T Consensus 187 ~kd~pG 192 (319)
T 3ado_A 187 LKEIDG 192 (319)
T ss_dssp SSCCTT
T ss_pred CCCCCC
Confidence 667654
No 84
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.17 E-value=5e-10 Score=111.40 Aligned_cols=156 Identities=18% Similarity=0.165 Sum_probs=103.3
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhcC
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (465)
+||+|||+|.||+.||..|+ + | ++|++|+++++.+++.... +...
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a-G-----~~V~v~d~~~~~~~~~~~~----------------------l~~~------ 57 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S-K-----HEVVLQDVSEKALEAAREQ----------------------IPEE------ 57 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-T-----SEEEEECSCHHHHHHHHHH----------------------SCGG------
T ss_pred CeEEEEeeCHHHHHHHHHHH-c-C-----CEEEEEECCHHHHHHHHHH----------------------HHHH------
Confidence 79999999999999999999 8 8 8999999998766542110 1100
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcch--HHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE--TKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~--l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
. +..++.++|+++ +.+||+||.|+|... ...++.++.++ + ++++++.+.++.
T Consensus 58 -~-------------------~~~i~~~~~~~~-~~~aDlVieavpe~~~vk~~l~~~l~~~--~---~~IlasntSti~ 111 (293)
T 1zej_A 58 -L-------------------LSKIEFTTTLEK-VKDCDIVMEAVFEDLNTKVEVLREVERL--T---NAPLCSNTSVIS 111 (293)
T ss_dssp -G-------------------GGGEEEESSCTT-GGGCSEEEECCCSCHHHHHHHHHHHHTT--C---CSCEEECCSSSC
T ss_pred -H-------------------hCCeEEeCCHHH-HcCCCEEEEcCcCCHHHHHHHHHHHhcC--C---CCEEEEECCCcC
Confidence 0 014667788865 799999999999875 56677888776 4 677777776665
Q ss_pred ccccccccCCCHHHHHHhHhCCCCccEE-EEeCCchhhhhhccCceEEEEe--CChhHHHHHHHHHcCCCCeEEecCCh
Q 012349 202 AELEAVPRIITPTQMINRATGVPIENIL-YLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGDL 277 (465)
Q Consensus 202 ~~~~~~~~~~~~se~I~e~lg~~~~~i~-vlsGP~~a~ev~~g~~t~~~~~--~~~~~~~~l~~ll~~~g~~v~~s~Di 277 (465)
+. .+.+.+..+..-+. -...|. ..+....++.+ .+++..+++..+++..|-.+....|.
T Consensus 112 ~~------------~~a~~~~~~~r~~G~Hf~~Pv-----~~~~lveiv~g~~t~~~~~~~~~~l~~~lGk~~v~v~d~ 173 (293)
T 1zej_A 112 VD------------DIAERLDSPSRFLGVHWMNPP-----HVMPLVEIVISRFTDSKTVAFVEGFLRELGKEVVVCKGQ 173 (293)
T ss_dssp HH------------HHHTTSSCGGGEEEEEECSST-----TTCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred HH------------HHHHHhhcccceEeEEecCcc-----ccCCEEEEECCCCCCHHHHHHHHHHHHHcCCeEEEeccc
Confidence 53 24443432211111 112232 22333333344 36788899999999888877666664
No 85
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.15 E-value=3.3e-10 Score=125.43 Aligned_cols=181 Identities=12% Similarity=0.117 Sum_probs=111.9
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
..+||+|||+|.||+.||..|+++ | ++|++|+++++.+++... .+.+.+++.. +. -.+....
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~a-G-----~~V~l~D~~~~~~~~~~~-~i~~~l~~~~-------~~-G~~~~~~--- 374 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASK-G-----TPILMKDINEHGIEQGLA-EAAKLLVGRV-------DK-GRMTPAK--- 374 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHT-T-----CCEEEECSSHHHHHHHHH-HHHHHHHHHH-------TT-TSSCHHH---
T ss_pred cCCEEEEECCChhhHHHHHHHHhC-C-----CEEEEEECCHHHHHHHHH-HHHHHHHHHH-------hc-CCCCHHH---
Confidence 357899999999999999999999 8 899999999877654211 0111111000 00 0011000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcch--HHHHHHHHHHhhhccCCCCEEEEeecc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE--TKEVFEEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~--l~~vl~~l~~~l~~~~~~~ivIs~~kG 199 (465)
.+++ +..+++++|+ +++.+||+||+|||.+. .++++.++.+++++ +++++|.+.+
T Consensus 375 ------~~~~-------------~~~i~~~~d~-~~~~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~---~~IlasntSt 431 (715)
T 1wdk_A 375 ------MAEV-------------LNGIRPTLSY-GDFGNVDLVVEAVVENPKVKQAVLAEVENHVRE---DAILASNTST 431 (715)
T ss_dssp ------HHHH-------------HHHEEEESSS-TTGGGCSEEEECCCSCHHHHHHHHHHHHTTSCT---TCEEEECCSS
T ss_pred ------HHHH-------------hcCeEEECCH-HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCC---CeEEEeCCCC
Confidence 0000 0136778888 67899999999999764 67888999988876 7888888888
Q ss_pred ccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeC--ChhHHHHHHHHHcCCCCeEEecCCh
Q 012349 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICG--AEKWRKPLAKFLRRPHFTVWDNGDL 277 (465)
Q Consensus 200 i~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~--~~~~~~~l~~ll~~~g~~v~~s~Di 277 (465)
++.. .+.+.+..+ .++... -|-.+.. ......++.+. +++..+.+.++++..|..+.+..|.
T Consensus 432 l~i~------------~la~~~~~~-~~~ig~-hf~~P~~--~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~ 495 (715)
T 1wdk_A 432 ISIS------------LLAKALKRP-ENFVGM-HFFNPVH--MMPLVEVIRGEKSSDLAVATTVAYAKKMGKNPIVVNDC 495 (715)
T ss_dssp SCHH------------HHGGGCSCG-GGEEEE-ECCSSTT--TCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCHH------------HHHHHhcCc-cceEEE-EccCCcc--cCceEEEEECCCCCHHHHHHHHHHHHHhCCEeEEEcCC
Confidence 7654 244544432 222111 1111111 12223333332 6778899999999888877776675
Q ss_pred HH
Q 012349 278 VT 279 (465)
Q Consensus 278 ~g 279 (465)
.|
T Consensus 496 ~G 497 (715)
T 1wdk_A 496 PG 497 (715)
T ss_dssp TT
T ss_pred CC
Confidence 44
No 86
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.11 E-value=1.8e-09 Score=113.80 Aligned_cols=176 Identities=12% Similarity=0.100 Sum_probs=109.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
++||+|||+|.||+.||..|+++ | ++|++|+++++.++..... +...+.. ++.. +.+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~-G-----~~V~l~D~~~~~~~~~~~~-i~~~l~~-------------~~~~--g~~~ 94 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV-G-----ISVVAVESDPKQLDAAKKI-ITFTLEK-------------EASR--AHQN 94 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSSHHHHHHHHHH-HHHHHHH-------------HHHH--HHHT
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHHHHHH-HHHHHHH-------------HHHc--CCCC
Confidence 57899999999999999999998 8 8999999998776653221 0000000 0000 0000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc--hHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~--~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
.... ......+++|+ +++.+||+||+|||.+ ..+++++++.+++++ ++++++.++++
T Consensus 95 ~~~~-----------------~~~~~~i~~~~-~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~---~~ii~snTs~~ 153 (463)
T 1zcj_A 95 GQAS-----------------AKPKLRFSSST-KELSTVDLVVEAVFEDMNLKKKVFAELSALCKP---GAFLCTNTSAL 153 (463)
T ss_dssp TCCC-----------------CCCCEEEESCG-GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCT---TCEEEECCSSS
T ss_pred HHHH-----------------HHHHhhhcCCH-HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCC---CeEEEeCCCCc
Confidence 0000 00123457788 5689999999999986 367889999998877 78888878776
Q ss_pred cccccccccCCCHHHHHHhHhCCCCccEE--EEeCCchhhhhhccCceEEEEe--CChhHHHHHHHHHcCCCCeEEecCC
Q 012349 201 EAELEAVPRIITPTQMINRATGVPIENIL--YLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGD 276 (465)
Q Consensus 201 ~~~~~~~~~~~~~se~I~e~lg~~~~~i~--vlsGP~~a~ev~~g~~t~~~~~--~~~~~~~~l~~ll~~~g~~v~~s~D 276 (465)
... .+.+.+..+ .++. ....|.. ......++.+ .+++..+.+..+++..|..+.+..|
T Consensus 154 ~~~------------~la~~~~~~-~~~ig~hf~~P~~-----~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~ 215 (463)
T 1zcj_A 154 NVD------------DIASSTDRP-QLVIGTHFFSPAH-----VMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGN 215 (463)
T ss_dssp CHH------------HHHTTSSCG-GGEEEEEECSSTT-----TCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEBCC
T ss_pred CHH------------HHHHHhcCC-cceEEeecCCCcc-----cceeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEECC
Confidence 543 355544432 2221 1123321 1222333332 4677788889998888877777667
Q ss_pred hHH
Q 012349 277 LVT 279 (465)
Q Consensus 277 i~g 279 (465)
..|
T Consensus 216 ~~g 218 (463)
T 1zcj_A 216 CYG 218 (463)
T ss_dssp STT
T ss_pred Ccc
Confidence 544
No 87
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.07 E-value=3.9e-10 Score=114.48 Aligned_cols=159 Identities=9% Similarity=0.068 Sum_probs=101.1
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
..+||+|||+|.||++||..|.++ | ++|++|+|+++.++.. .+.
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~-G-----~~V~~~dr~~~~~~~a---------~~~--------------------- 50 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAA-N-----HSVFGYNRSRSGAKSA---------VDE--------------------- 50 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSCHHHHHHH---------HHT---------------------
T ss_pred CCCEEEEEeecHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHH---------HHc---------------------
Confidence 357999999999999999999998 7 8999999998654421 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc----CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEee
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW----DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~----~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~ 197 (465)
++..++++++++. ++|+||+|||++.+.++++++.++ ++ +++|+.++
T Consensus 51 -------------------------G~~~~~~~~e~~~~a~~~aDlVilavP~~~~~~vl~~l~~~-~~---~~iv~Dv~ 101 (341)
T 3ktd_A 51 -------------------------GFDVSADLEATLQRAAAEDALIVLAVPMTAIDSLLDAVHTH-AP---NNGFTDVV 101 (341)
T ss_dssp -------------------------TCCEESCHHHHHHHHHHTTCEEEECSCHHHHHHHHHHHHHH-CT---TCCEEECC
T ss_pred -------------------------CCeeeCCHHHHHHhcccCCCEEEEeCCHHHHHHHHHHHHcc-CC---CCEEEEcC
Confidence 1234566666554 579999999999999999999886 54 56665443
Q ss_pred ccccccccccccCCCHHHHHHhHhCC----CCccEE--EEeCCchhh-hhhccCceEEEEe--CChh--------HHHHH
Q 012349 198 KGVEAELEAVPRIITPTQMINRATGV----PIENIL--YLGGPNIAS-EIYNKEYANARIC--GAEK--------WRKPL 260 (465)
Q Consensus 198 kGi~~~~~~~~~~~~~se~I~e~lg~----~~~~i~--vlsGP~~a~-ev~~g~~t~~~~~--~~~~--------~~~~l 260 (465)
++... +.+.+.+.+.. +.+|+. ..+||..+. ++..|.+..++.. .+++ ..+.+
T Consensus 102 -Svk~~---------i~~~~~~~~~~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~~~~e~~~~~~~~~~~~v 171 (341)
T 3ktd_A 102 -SVKTA---------VYDAVKARNMQHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLFDGTDINSTWISIWKDV 171 (341)
T ss_dssp -SCSHH---------HHHHHHHTTCGGGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGGTSSCCCCHHHHHHHHHH
T ss_pred -CCChH---------HHHHHHHhCCCCcEecCCccccccccchhhhhhHHhcCCeEEEEeCCCCChhhhccchHHHHHHH
Confidence 33221 11233332210 012211 124444433 3455655544332 2345 67899
Q ss_pred HHHHcCCCCeEEecC
Q 012349 261 AKFLRRPHFTVWDNG 275 (465)
Q Consensus 261 ~~ll~~~g~~v~~s~ 275 (465)
+++|+..|.+++..+
T Consensus 172 ~~l~~~~Ga~v~~~~ 186 (341)
T 3ktd_A 172 VQMALAVGAEVVPSR 186 (341)
T ss_dssp HHHHHHTTCEEEECC
T ss_pred HHHHHHcCCEEEEeC
Confidence 999999997776543
No 88
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.95 E-value=3e-09 Score=105.91 Aligned_cols=107 Identities=17% Similarity=0.287 Sum_probs=74.1
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCe--eEEEEecCchhhhhhhhhhhHHHHh-chhhhHHhhhhcccccchh
Q 012349 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVIN-SREDVLRRLIRRCAYLKYV 117 (465)
Q Consensus 41 ~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~--~V~l~~r~~~~~~~i~~~~l~~~i~-~~~~~~~~~~~n~~~l~~~ 117 (465)
.++|||+|||+|+||+++|..|+.+ | + +|++|++++++++.. .++ .++ . .+..
T Consensus 5 ~~~mkI~IiGaG~vG~~~a~~l~~~-g-----~~~~V~l~d~~~~~~~~~-------~~~~~~~--------~-~~~~-- 60 (319)
T 1lld_A 5 VKPTKLAVIGAGAVGSTLAFAAAQR-G-----IAREIVLEDIAKERVEAE-------VLDMQHG--------S-SFYP-- 60 (319)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-T-----CCSEEEEECSSHHHHHHH-------HHHHHHT--------G-GGST--
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-C-----CCCEEEEEeCChhHHHHH-------HHHHHhh--------h-hhcC--
Confidence 3468999999999999999999998 7 6 999999987554310 011 000 0 0100
Q ss_pred hhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchH----------------HHHHHHHH
Q 012349 118 EARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTET----------------KEVFEEIS 181 (465)
Q Consensus 118 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l----------------~~vl~~l~ 181 (465)
. ..+..+++. +++.++|+||++++.... +++++++.
T Consensus 61 -----~----------------------~~v~~~~~~-~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~ 112 (319)
T 1lld_A 61 -----T----------------------VSIDGSDDP-EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLV 112 (319)
T ss_dssp -----T----------------------CEEEEESCG-GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -----C----------------------eEEEeCCCH-HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 134455565 468899999999965443 37888888
Q ss_pred HhhhccCCCCEEEEeecccccc
Q 012349 182 RYWKERITVPVIISLAKGVEAE 203 (465)
Q Consensus 182 ~~l~~~~~~~ivIs~~kGi~~~ 203 (465)
++ .+ +++|++++||++..
T Consensus 113 ~~-~~---~~~vi~~~Np~~~~ 130 (319)
T 1lld_A 113 KV-AP---NAIYMLITNPVDIA 130 (319)
T ss_dssp HH-CT---TSEEEECCSSHHHH
T ss_pred Hh-CC---CceEEEecCchHHH
Confidence 75 44 68899999999765
No 89
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.94 E-value=7.5e-09 Score=104.49 Aligned_cols=106 Identities=12% Similarity=0.173 Sum_probs=75.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~-~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
+|||+|||+|.||+++|..|+.+ | + +|.+|+++++.++.... . +... + .++.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~-g-----~~~V~L~D~~~~~~~~~~~-~----l~~~---------~-~~~~------ 61 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALR-E-----LADVVLYDVVKGMPEGKAL-D----LSHV---------T-SVVD------ 61 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-T-----CCEEEEECSSSSHHHHHHH-H----HHHH---------H-HHTT------
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEECChhHHHHHHH-H----HHhh---------h-hccC------
Confidence 58999999999999999999998 7 6 89999999876653110 0 1100 0 0111
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--Ccc-------------------hHHHHHHHH
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PST-------------------ETKEVFEEI 180 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaV--ps~-------------------~l~~vl~~l 180 (465)
. ...+.+|+|+++++++||+||+++ |.. .++++++++
T Consensus 62 ----~------------------~~~i~~t~d~~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i 119 (331)
T 1pzg_A 62 ----T------------------NVSVRAEYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNI 119 (331)
T ss_dssp ----C------------------CCCEEEECSHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHH
T ss_pred ----C------------------CCEEEEeCCHHHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 025778899988899999999998 532 167788888
Q ss_pred HHhhhccCCCCEEEEeecccc
Q 012349 181 SRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 181 ~~~l~~~~~~~ivIs~~kGi~ 201 (465)
.++.+ +.+++..+|-.+
T Consensus 120 ~~~~p----~a~vi~~tNP~~ 136 (331)
T 1pzg_A 120 KKYCP----KTFIIVVTNPLD 136 (331)
T ss_dssp HHHCT----TCEEEECCSSHH
T ss_pred HHHCC----CcEEEEEcCchH
Confidence 87763 577777776543
No 90
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.90 E-value=1.1e-08 Score=102.37 Aligned_cols=107 Identities=10% Similarity=0.174 Sum_probs=76.6
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~-~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
++|||+|||+|+||+++|..|+.+ | + +|++|+++++.++... ++-.+ .+. +..
T Consensus 3 ~~~kI~VIGaG~~G~~ia~~la~~-g-----~~~V~l~D~~~~~~~~~~-------~~l~~-------~~~-~~~----- 56 (317)
T 2ewd_A 3 ERRKIAVIGSGQIGGNIAYIVGKD-N-----LADVVLFDIAEGIPQGKA-------LDITH-------SMV-MFG----- 56 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-T-----CCEEEEECSSSSHHHHHH-------HHHHH-------HHH-HHT-----
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-C-----CceEEEEeCCchHHHHHH-------HHHHh-------hhh-hcC-----
Confidence 358999999999999999999999 7 6 8999999987655311 00000 000 000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--------------C--cchHHHHHHHHHHhh
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--------------P--STETKEVFEEISRYW 184 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaV--------------p--s~~l~~vl~~l~~~l 184 (465)
. ...+..++|. +++++||+||+++ | ...++++++++.++.
T Consensus 57 -----~------------------~~~i~~t~d~-~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~ 112 (317)
T 2ewd_A 57 -----S------------------TSKVIGTDDY-ADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYC 112 (317)
T ss_dssp -----C------------------CCCEEEESCG-GGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred -----C------------------CcEEEECCCH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC
Confidence 0 0146777888 6789999999999 3 235788888888875
Q ss_pred hccCCCCEEEEeeccccc
Q 012349 185 KERITVPVIISLAKGVEA 202 (465)
Q Consensus 185 ~~~~~~~ivIs~~kGi~~ 202 (465)
+ +++++.++|....
T Consensus 113 ~----~~iii~~sNp~~~ 126 (317)
T 2ewd_A 113 P----NAFVICITNPLDV 126 (317)
T ss_dssp T----TSEEEECCSSHHH
T ss_pred C----CcEEEEeCChHHH
Confidence 4 5888899987654
No 91
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.89 E-value=1.3e-08 Score=106.79 Aligned_cols=154 Identities=14% Similarity=0.078 Sum_probs=103.2
Q ss_pred ceEEEECccHHHHHHHHHHHHh-----cCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhh
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDS-----YGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~-----~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~ 118 (465)
+||+|||.|+||.++|..|.++ .| ++|+++.++.....+ .... .+
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G-----~~ViVg~r~~sks~e--------~A~e---------------~G-- 104 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSD-----IVVKIGLRKGSKSFD--------EARA---------------AG-- 104 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCC-----CEEEEEECTTCSCHH--------HHHH---------------TT--
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCC-----CEEEEEeCCchhhHH--------HHHH---------------CC--
Confidence 6999999999999999999875 14 688877765432110 0000 00
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeec
Q 012349 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 119 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~k 198 (465)
+.. ......++.+++++||+||++||.+...+++++|.+++++ +++ |+++.
T Consensus 105 -----------------~~v--------~d~ta~s~aEAa~~ADVVILaVP~~~~~eVl~eI~p~LK~---GaI-Ls~Aa 155 (525)
T 3fr7_A 105 -----------------FTE--------ESGTLGDIWETVSGSDLVLLLISDAAQADNYEKIFSHMKP---NSI-LGLSH 155 (525)
T ss_dssp -----------------CCT--------TTTCEEEHHHHHHHCSEEEECSCHHHHHHHHHHHHHHSCT---TCE-EEESS
T ss_pred -----------------CEE--------ecCCCCCHHHHHhcCCEEEECCChHHHHHHHHHHHHhcCC---CCe-EEEeC
Confidence 000 0001246778899999999999999888999999999987 565 78999
Q ss_pred cccccccccccCCCHHHHHHh---HhCCCCccEEEEeCCchhhhh-------h-----ccCceEEEEeC--ChhHHHHHH
Q 012349 199 GVEAELEAVPRIITPTQMINR---ATGVPIENILYLGGPNIASEI-------Y-----NKEYANARICG--AEKWRKPLA 261 (465)
Q Consensus 199 Gi~~~~~~~~~~~~~se~I~e---~lg~~~~~i~vlsGP~~a~ev-------~-----~g~~t~~~~~~--~~~~~~~l~ 261 (465)
|+... .+++ .++. .--+++.+||.+..+ + .|.++.+.+.. +.+..+.+.
T Consensus 156 Gf~I~------------~le~~~i~~p~--dv~VVrVmPNtPg~~VR~~y~~G~~~~g~Gv~~liAv~qd~tgea~e~al 221 (525)
T 3fr7_A 156 GFLLG------------HLQSAGLDFPK--NISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVAL 221 (525)
T ss_dssp SHHHH------------HHHHTTCCCCT--TSEEEEEEESSCHHHHHHHHHHHTTSTTCSCCEEEEEEECSSSCHHHHHH
T ss_pred CCCHH------------HHhhhcccCCC--CCcEEEEecCCCchhHHHHHhcccccccCCccEEEEcCCCCCHHHHHHHH
Confidence 98764 3443 2322 113678899888776 3 56665555433 335667777
Q ss_pred HHHcCCCCe
Q 012349 262 KFLRRPHFT 270 (465)
Q Consensus 262 ~ll~~~g~~ 270 (465)
.+|...|..
T Consensus 222 ala~aiG~~ 230 (525)
T 3fr7_A 222 GWSVALGSP 230 (525)
T ss_dssp HHHHHTTCS
T ss_pred HHHHHCCCC
Confidence 788877754
No 92
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.88 E-value=1.4e-08 Score=101.24 Aligned_cols=106 Identities=18% Similarity=0.167 Sum_probs=74.9
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
||||+|||+|+||+++|..|+.+ |. .++|++|+++++.++.+.. -+.. . + .+++
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~-g~---~~~V~l~d~~~~~~~~~~~-----~l~~-~--------~-~~~~------- 54 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQ-GV---ADDYVFIDANEAKVKADQI-----DFQD-A--------M-ANLE------- 54 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TC---CSEEEEECSSHHHHHHHHH-----HHHH-H--------G-GGSS-------
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CC---CCEEEEEcCCHHHHHHHHH-----HHHh-h--------h-hhcC-------
Confidence 37999999999999999999998 63 1689999999876553211 0110 0 0 0110
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEE-ecCHHHHhcCCCEEEEecCcch--------------------HHHHHHHHH
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKV-VTNLQEAVWDADIVINGLPSTE--------------------TKEVFEEIS 181 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~-t~dl~eal~~aDiVIlaVps~~--------------------l~~vl~~l~ 181 (465)
..+.+ ++|+ +++.++|+||+++|+.. ++++++++.
T Consensus 55 -----------------------~~~~~~~~d~-~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~ 110 (309)
T 1hyh_A 55 -----------------------AHGNIVINDW-AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLK 110 (309)
T ss_dssp -----------------------SCCEEEESCG-GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHH
T ss_pred -----------------------CCeEEEeCCH-HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 02333 5677 67899999999999866 477888887
Q ss_pred HhhhccCCCCEEEEeeccccc
Q 012349 182 RYWKERITVPVIISLAKGVEA 202 (465)
Q Consensus 182 ~~l~~~~~~~ivIs~~kGi~~ 202 (465)
++.+ +++++.++|+++.
T Consensus 111 ~~~~----~~~ii~~tNp~~~ 127 (309)
T 1hyh_A 111 ESGF----HGVLVVISNPVDV 127 (309)
T ss_dssp HTTC----CSEEEECSSSHHH
T ss_pred HHCC----CcEEEEEcCcHHH
Confidence 7653 5778889998865
No 93
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.82 E-value=3.1e-08 Score=99.80 Aligned_cols=106 Identities=17% Similarity=0.229 Sum_probs=74.2
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~-~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
++|||+|||+|.||+++|..|+.+ | + +|.+|+++++.++.... . +... +. ++.
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~-g-----~~~V~L~Di~~~~l~~~~~-~----l~~~---------~~-~~~----- 66 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQK-D-----LGDVYMFDIIEGVPQGKAL-D----LNHC---------MA-LIG----- 66 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECSSTTHHHHHHH-H----HHHH---------HH-HHT-----
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEECCHHHHHHHHH-H----HHhH---------hh-ccC-----
Confidence 347999999999999999999998 7 6 89999999876653110 0 1110 00 000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--Cc--------------chHHHHHHHHHHhh
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PS--------------TETKEVFEEISRYW 184 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaV--ps--------------~~l~~vl~~l~~~l 184 (465)
. ...+..++|. +++.+||+||+++ |. ..++++++++.++.
T Consensus 67 --~---------------------~~~i~~t~d~-~al~~aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~ 122 (328)
T 2hjr_A 67 --S---------------------PAKIFGENNY-EYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC 122 (328)
T ss_dssp --C---------------------CCCEEEESCG-GGGTTCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC
T ss_pred --C---------------------CCEEEECCCH-HHHCCCCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC
Confidence 0 0257788898 7899999999998 43 23677788888776
Q ss_pred hccCCCCEEEEeecccc
Q 012349 185 KERITVPVIISLAKGVE 201 (465)
Q Consensus 185 ~~~~~~~ivIs~~kGi~ 201 (465)
+ +.+++.++|-++
T Consensus 123 p----~a~viv~tNP~~ 135 (328)
T 2hjr_A 123 P----NAFVICITNPLD 135 (328)
T ss_dssp T----TCEEEECCSSHH
T ss_pred C----CeEEEEecCchH
Confidence 3 577777777543
No 94
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.76 E-value=4.9e-08 Score=97.83 Aligned_cols=103 Identities=17% Similarity=0.218 Sum_probs=72.1
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCe--eEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~--~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
|||+|||+|+||+++|..|+.+ | + +|.+|+++++.++.+.. .+... .+ ++.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~-g-----~~~~V~l~D~~~~~~~~~~~-----~l~~~---------~~-~~~------ 53 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMK-G-----FAREMVLIDVDKKRAEGDAL-----DLIHG---------TP-FTR------ 53 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-T-----CCSEEEEECSSHHHHHHHHH-----HHHHH---------GG-GSC------
T ss_pred CEEEEECCCHHHHHHHHHHHhC-C-----CCCeEEEEeCChHHHHHHHH-----HHHhh---------hh-hcC------
Confidence 6999999999999999999998 7 6 89999999865543111 01100 00 110
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcch----------------HHHHHHHHHHhhh
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE----------------TKEVFEEISRYWK 185 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~----------------l~~vl~~l~~~l~ 185 (465)
. ..+.. +|. ++++++|+||+++|... ++++++++.++.+
T Consensus 54 -~----------------------~~i~~-~d~-~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~ 108 (319)
T 1a5z_A 54 -R----------------------ANIYA-GDY-ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAP 108 (319)
T ss_dssp -C----------------------CEEEE-CCG-GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred -C----------------------cEEEe-CCH-HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 0 12444 354 56899999999999643 5777788877753
Q ss_pred ccCCCCEEEEeeccccc
Q 012349 186 ERITVPVIISLAKGVEA 202 (465)
Q Consensus 186 ~~~~~~ivIs~~kGi~~ 202 (465)
++++|.++|++..
T Consensus 109 ----~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 109 ----DSIVIVVTNPVDV 121 (319)
T ss_dssp ----TCEEEECSSSHHH
T ss_pred ----CeEEEEeCCcHHH
Confidence 5788889998765
No 95
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=98.74 E-value=2.8e-07 Score=102.24 Aligned_cols=178 Identities=13% Similarity=0.114 Sum_probs=115.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
..||+|||+|.||+.||..++.+ | ++|++++++++.+++... .+...++.... . .....
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~a-G-----~~V~l~D~~~~~l~~~~~-~i~~~l~~~~~-------~-~~~~~------ 374 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARV-G-----ISVVAVESDPKQLDAAKK-IITFTLEKEAS-------R-AHQNG------ 374 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSSHHHHHHHHH-HHHHHHHHHHH-------H-HHTTT------
T ss_pred ccEEEEEcccHHHHHHHHHHHhC-C-----CchhcccchHhhhhhHHH-HHHHHHHHHHH-------h-ccccc------
Confidence 36999999999999999999998 8 899999999987765321 11111211100 0 00000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc--hHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~--~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
. +.....+..+++.++ +.+||+||.||+.. ..++++++|.+++++ ++++.|.|.++
T Consensus 375 ~------------------~~~~~~~~~~~~~~~-l~~aDlVIEAV~E~l~iK~~vf~~le~~~~~---~aIlASNTSsl 432 (742)
T 3zwc_A 375 Q------------------ASAKPKLRFSSSTKE-LSTVDLVVEAVFEDMNLKKKVFAELSALCKP---GAFLCTNTSAL 432 (742)
T ss_dssp C------------------CCCCCCEEEESCGGG-GGSCSEEEECCCSCHHHHHHHHHHHHHHSCT---TCEEEECCSSS
T ss_pred h------------------hhhhhhhcccCcHHH-HhhCCEEEEeccccHHHHHHHHHHHhhcCCC---CceEEecCCcC
Confidence 0 001135778888754 89999999999976 688899999999988 79888888888
Q ss_pred cccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEe--CChhHHHHHHHHHcCCCCeEEecCChH
Q 012349 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGDLV 278 (465)
Q Consensus 201 ~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~--~~~~~~~~l~~ll~~~g~~v~~s~Di~ 278 (465)
... + |.+.+..| .+++.+ .|...+-.-....++.+ .+++..+.+.++....|....+..|.-
T Consensus 433 ~i~-----------~-ia~~~~~p-~r~ig~---HFfnP~~~m~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~pV~vkd~p 496 (742)
T 3zwc_A 433 NVD-----------D-IASSTDRP-QLVIGT---HFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCY 496 (742)
T ss_dssp CHH-----------H-HHTTSSCG-GGEEEE---ECCSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEECCCST
T ss_pred ChH-----------H-HHhhcCCc-cccccc---cccCCCCCCceEEEecCCCCCHHHHHHHHHHHHHhCCCCcccCCCC
Confidence 764 3 55555543 343322 11111111112233332 356777888888888887777777755
Q ss_pred H
Q 012349 279 T 279 (465)
Q Consensus 279 g 279 (465)
|
T Consensus 497 G 497 (742)
T 3zwc_A 497 G 497 (742)
T ss_dssp T
T ss_pred C
Confidence 4
No 96
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.68 E-value=1.3e-07 Score=94.32 Aligned_cols=107 Identities=17% Similarity=0.110 Sum_probs=71.8
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhcC
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (465)
|||+|||+|+||+++|..|+.+ +. +++|.+|+++++.++.+.. -+... .+.. ..
T Consensus 1 mkI~VIGaG~vG~~la~~la~~-~~---g~~V~l~D~~~~~~~~~~~-----~l~~~-------------~~~~----~~ 54 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEK-QL---ARELVLLDVVEGIPQGKAL-----DMYES-------------GPVG----LF 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TC---CSEEEEECSSSSHHHHHHH-----HHHTT-------------HHHH----TC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CC---CCEEEEEeCChhHHHHHHH-----hHHhh-------------hhcc----cC
Confidence 6999999999999999999985 31 2899999999876553110 01100 0000 00
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc----------------hHHHHHHHHHHhhhcc
Q 012349 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRYWKER 187 (465)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~----------------~l~~vl~~l~~~l~~~ 187 (465)
...+.+++|.++ +++||+||+++|.. .++++++.+.++.+
T Consensus 55 ---------------------~~~i~~t~d~~~-l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~-- 110 (310)
T 1guz_A 55 ---------------------DTKVTGSNDYAD-TANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSK-- 110 (310)
T ss_dssp ---------------------CCEEEEESCGGG-GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCS--
T ss_pred ---------------------CcEEEECCCHHH-HCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC--
Confidence 014667788866 89999999999753 13566666666643
Q ss_pred CCCCEEEEeeccccc
Q 012349 188 ITVPVIISLAKGVEA 202 (465)
Q Consensus 188 ~~~~ivIs~~kGi~~ 202 (465)
+..++.++|.+..
T Consensus 111 --~~~viv~tNP~~~ 123 (310)
T 1guz_A 111 --NPIIIVVSNPLDI 123 (310)
T ss_dssp --SCEEEECCSSHHH
T ss_pred --CcEEEEEcCchHH
Confidence 5777888887654
No 97
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.63 E-value=1.2e-07 Score=91.03 Aligned_cols=130 Identities=9% Similarity=0.052 Sum_probs=87.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
.+|||+|||+|.||++||..|.++ | ++|+.|++.+
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~-G-----~~V~~~~~~~--------------------------------------- 39 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSV-G-----HYVTVLHAPE--------------------------------------- 39 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHT-T-----CEEEECSSGG---------------------------------------
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEecCHH---------------------------------------
Confidence 458999999999999999999998 7 8999887631
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
+ +.++| |+|||.+.+.++++++.+++++ +++|+.++-.+.
T Consensus 40 ----------------------------------~-~~~aD--ilavP~~ai~~vl~~l~~~l~~---g~ivvd~sgs~~ 79 (232)
T 3dfu_A 40 ----------------------------------D-IRDFE--LVVIDAHGVEGYVEKLSAFARR---GQMFLHTSLTHG 79 (232)
T ss_dssp ----------------------------------G-GGGCS--EEEECSSCHHHHHHHHHTTCCT---TCEEEECCSSCC
T ss_pred ----------------------------------H-hccCC--EEEEcHHHHHHHHHHHHHhcCC---CCEEEEECCcCH
Confidence 0 23578 9999999999999999988876 678887763332
Q ss_pred ccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEecCCh
Q 012349 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDL 277 (465)
Q Consensus 202 ~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di 277 (465)
.+ +++....... .+ +-.-|-+ +.+ .+....+++..+.++++++..|-+++..++-
T Consensus 80 ~~------------vl~~~~~~g~-~f-vg~HPm~------g~~-~~i~a~d~~a~~~l~~L~~~lG~~vv~~~~~ 134 (232)
T 3dfu_A 80 IT------------VMDPLETSGG-IV-MSAHPIG------QDR-WVASALDELGETIVGLLVGELGGSIVEIADD 134 (232)
T ss_dssp GG------------GGHHHHHTTC-EE-EEEEEEE------TTE-EEEEESSHHHHHHHHHHHHHTTCEECCCCGG
T ss_pred HH------------HHHHHHhCCC-cE-EEeeeCC------CCc-eeeeCCCHHHHHHHHHHHHHhCCEEEEeCHH
Confidence 22 2333221111 11 1112332 222 2222345667888999999989887776553
No 98
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=98.63 E-value=3.1e-07 Score=92.31 Aligned_cols=106 Identities=16% Similarity=0.168 Sum_probs=73.6
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~-~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
.+|||+|||+|.||+++|..|+.+ | + +|.+|+++++.++... ..++.. +...
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la~~-g-----~~~v~L~Di~~~~l~~~~-----~~l~~~-------------~~~~--- 55 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIVQK-N-----LGDVVLFDIVKNMPHGKA-----LDTSHT-------------NVMA--- 55 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECSSSSHHHHHH-----HHHHTH-------------HHHH---
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEeCCHHHHHHHH-----HHHHhh-------------hhhc---
Confidence 357999999999999999999998 7 5 7999999987655311 011110 0000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--Ccc-------------------hHHHHHHH
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PST-------------------ETKEVFEE 179 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaV--ps~-------------------~l~~vl~~ 179 (465)
+. ...+..++|. +++++||+||+++ |.. .+++++++
T Consensus 56 -~~---------------------~~~i~~t~d~-~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~ 112 (322)
T 1t2d_A 56 -YS---------------------NCKVSGSNTY-DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGH 112 (322)
T ss_dssp -TC---------------------CCCEEEECCG-GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHH
T ss_pred -CC---------------------CcEEEECCCH-HHhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHH
Confidence 00 0157777888 7899999999998 531 36777788
Q ss_pred HHHhhhccCCCCEEEEeecccc
Q 012349 180 ISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 180 l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
+.++.+ +.+++.++|-.+
T Consensus 113 i~~~~p----~a~iiv~tNP~~ 130 (322)
T 1t2d_A 113 IKKNCP----NAFIIVVTNPVD 130 (322)
T ss_dssp HHHHCT----TSEEEECSSSHH
T ss_pred HHHHCC----CeEEEEecCChH
Confidence 877763 577777777543
No 99
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.61 E-value=2.1e-07 Score=92.41 Aligned_cols=107 Identities=10% Similarity=0.006 Sum_probs=69.4
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhcC
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (465)
|||+|||+|.||+++|..|+.+ |.. .+|.+|+++++.++.. .++-.+ .++ +++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~-~~~---~~v~L~D~~~~~~~g~-------~~dl~~-------~~~-~~~-------- 53 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLN-LDV---DEIALVDIAEDLAVGE-------AMDLAH-------AAA-GID-------- 53 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-SCC---SEEEEECSSHHHHHHH-------HHHHHH-------HHH-TTT--------
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCC---CeEEEEECChHHHHHH-------HHHHHh-------hhh-hcC--------
Confidence 7999999999999999999998 721 2899999998765421 011111 011 111
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc----------------hHHHHHHHHHHhhhcc
Q 012349 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRYWKER 187 (465)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~----------------~l~~vl~~l~~~l~~~ 187 (465)
.+ ..+.+++| .+++++||+||++.... .++++.+.+.++. +
T Consensus 54 --~~------------------~~i~~t~d-~~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p- 110 (294)
T 1oju_A 54 --KY------------------PKIVGGAD-YSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-P- 110 (294)
T ss_dssp --CC------------------CEEEEESC-GGGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTS-T-
T ss_pred --CC------------------CEEEEeCC-HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-C-
Confidence 00 14667778 67899999999987432 1344445555542 2
Q ss_pred CCCCEEEEeeccccc
Q 012349 188 ITVPVIISLAKGVEA 202 (465)
Q Consensus 188 ~~~~ivIs~~kGi~~ 202 (465)
+.+++.++|-++.
T Consensus 111 --~a~iivvsNPvd~ 123 (294)
T 1oju_A 111 --ESKILVVTNPMDV 123 (294)
T ss_dssp --TCEEEECSSSHHH
T ss_pred --CeEEEEeCCcchH
Confidence 6788888876543
No 100
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.56 E-value=1.9e-07 Score=92.97 Aligned_cols=103 Identities=17% Similarity=0.118 Sum_probs=68.7
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCe--eEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~--~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
|||+|||+|.||+++|..|+.+ | + +|.+|+++++.++.. ...-.+ ..+ +++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~-g-----~~~eV~L~D~~~~~~~~~-------~~~l~~-------~~~-~~~------ 53 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLR-G-----SCSELVLVDRDEDRAQAE-------AEDIAH-------AAP-VSH------ 53 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CCSEEEEECSSHHHHHHH-------HHHHTT-------SCC-TTS------
T ss_pred CEEEEECCCHHHHHHHHHHHhC-C-----CCCEEEEEeCCHHHHHHH-------HHhhhh-------hhh-hcC------
Confidence 6999999999999999999988 7 6 899999997644320 010000 000 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc----------------hHHHHHHHHHHhhh
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRYWK 185 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~----------------~l~~vl~~l~~~l~ 185 (465)
. ..+.. ++. +++++||+||++++.. .++++++++.++.
T Consensus 54 -~----------------------~~i~~-~~~-~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~- 107 (304)
T 2v6b_A 54 -G----------------------TRVWH-GGH-SELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAA- 107 (304)
T ss_dssp -C----------------------CEEEE-ECG-GGGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHHC-
T ss_pred -C----------------------eEEEE-CCH-HHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhC-
Confidence 0 12333 454 5789999999999543 3477788888774
Q ss_pred ccCCCCEEEEeeccccc
Q 012349 186 ERITVPVIISLAKGVEA 202 (465)
Q Consensus 186 ~~~~~~ivIs~~kGi~~ 202 (465)
+ +++++.++|+++.
T Consensus 108 p---~~~vi~~tNP~~~ 121 (304)
T 2v6b_A 108 P---DAVLLVTSNPVDL 121 (304)
T ss_dssp S---SSEEEECSSSHHH
T ss_pred C---CeEEEEecCchHH
Confidence 4 6788888998764
No 101
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.56 E-value=1.8e-07 Score=98.74 Aligned_cols=111 Identities=15% Similarity=0.243 Sum_probs=75.9
Q ss_pred CceEEEECccHH-HHHHHHHHHHhc-CCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 43 PLRIVGVGAGAW-GSVFTAMLQDSY-GYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 43 ~mkIaIIGaGam-GsalA~~La~~~-G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
+|||+|||+|+| |+++|..|+.+. + +. +++|.||++++++++.++. + .. .+++..
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~-l~-~~eV~L~Di~~e~~~~~~~--~---~~-------------~~l~~~--- 84 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEE-FP-IRKLKLYDNDKERQDRIAG--A---CD-------------VFIREK--- 84 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTT-SC-EEEEEEECSCHHHHHHHHH--H---HH-------------HHHHHH---
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCC-CC-CCEEEEEeCCHHHHHHHHH--H---HH-------------HHhccC---
Confidence 469999999999 777887787651 1 10 2789999999987664211 0 00 122321
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcch----------------------------
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE---------------------------- 172 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~---------------------------- 172 (465)
.++ ..+.+++|+++++++||+||+++|+..
T Consensus 85 ----~~~------------------~~I~~t~D~~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~ 142 (472)
T 1u8x_X 85 ----APD------------------IEFAATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIA 142 (472)
T ss_dssp ----CTT------------------SEEEEESCHHHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHH
T ss_pred ----CCC------------------CEEEEECCHHHHHcCCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHH
Confidence 010 257788999889999999999999843
Q ss_pred --------HHHHHHHHHHhhhccCCCCEEEEeeccccc
Q 012349 173 --------TKEVFEEISRYWKERITVPVIISLAKGVEA 202 (465)
Q Consensus 173 --------l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~ 202 (465)
+.++++++.++.+ +++++..+|-++.
T Consensus 143 ~~~rni~i~~~i~~~i~~~~P----~A~ii~~TNPvdi 176 (472)
T 1u8x_X 143 YGMRSIGGVLEILDYMEKYSP----DAWMLNYSNPAAI 176 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT----TCEEEECCSCHHH
T ss_pred HHhhhHHHHHHHHHHHHHHCC----CeEEEEeCCcHHH
Confidence 4456666666654 6889999987753
No 102
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.50 E-value=4.6e-07 Score=95.75 Aligned_cols=83 Identities=22% Similarity=0.285 Sum_probs=56.8
Q ss_pred CceEEEECccH--HHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 43 PLRIVGVGAGA--WGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 43 ~mkIaIIGaGa--mGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
+|||+|||+|+ ||+++|..|+...+ + ++++|.||+++++.++.++.. .. .+++..
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~-l-~~~eV~L~Di~~e~l~~~~~~-----~~-------------~~l~~~--- 59 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPG-L-SGSTVTLMDIDEERLDAILTI-----AK-------------KYVEEV--- 59 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGG-G-TTCEEEEECSCHHHHHHHHHH-----HH-------------HHHHHT---
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCc-C-CCCEEEEEeCCHHHHHHHHHH-----HH-------------HHhccC---
Confidence 47999999999 57888888874311 0 017999999999876642211 10 122211
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS 170 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps 170 (465)
..+ ..+++++|+.+++++||+||+++|+
T Consensus 60 ----~~~------------------~~I~~ttD~~eal~dAD~VIiaagv 87 (480)
T 1obb_A 60 ----GAD------------------LKFEKTMNLDDVIIDADFVINTAMV 87 (480)
T ss_dssp ----TCC------------------CEEEEESCHHHHHTTCSEEEECCCT
T ss_pred ----CCC------------------cEEEEECCHHHHhCCCCEEEECCCc
Confidence 000 2578889998889999999999986
No 103
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=98.42 E-value=4.7e-07 Score=91.45 Aligned_cols=94 Identities=18% Similarity=0.234 Sum_probs=71.3
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 41 ~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
...++|+|||+|.||.++|..+... | .+|.+|+|+++..+
T Consensus 162 l~g~~vgIIG~G~iG~~vA~~l~~~-G-----~~V~~~dr~~~~~~---------------------------------- 201 (333)
T 3ba1_A 162 FSGKRVGIIGLGRIGLAVAERAEAF-D-----CPISYFSRSKKPNT---------------------------------- 201 (333)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSSCCTTC----------------------------------
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEECCCchhcc----------------------------------
Confidence 3457999999999999999999877 7 89999998763110
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH-HHHHHhhhccCCCCEEEEeec
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl-~~l~~~l~~~~~~~ivIs~~k 198 (465)
......+++++++++|+|++++|.. .++.++ ++..+.+++ ++++|+++.
T Consensus 202 --------------------------g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~---gailIn~sr 252 (333)
T 3ba1_A 202 --------------------------NYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGP---KGVLINIGR 252 (333)
T ss_dssp --------------------------CSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCT---TCEEEECSC
T ss_pred --------------------------CceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCC---CCEEEECCC
Confidence 1123467888889999999999975 566666 344455666 688999998
Q ss_pred ccccc
Q 012349 199 GVEAE 203 (465)
Q Consensus 199 Gi~~~ 203 (465)
|-...
T Consensus 253 G~~vd 257 (333)
T 3ba1_A 253 GPHVD 257 (333)
T ss_dssp GGGBC
T ss_pred CchhC
Confidence 86554
No 104
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.41 E-value=2.6e-06 Score=85.69 Aligned_cols=105 Identities=13% Similarity=0.160 Sum_probs=70.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~-~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
+|||+|||+|.||+++|..|+.+ | + +|.+|+++++.++.... + ++.. +. ++.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~-~-----~~~v~L~Di~~~~~~g~~~----d-l~~~---------~~-~~~------ 59 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLK-E-----LGDVVLFDIAEGTPQGKGL----D-IAES---------SP-VDG------ 59 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECSSSSHHHHHHH----H-HHHH---------HH-HHT------
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEeCCchhHHHHHH----H-Hhch---------hh-hcC------
Confidence 47999999999999999999988 7 6 89999999876542110 0 1110 00 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc----------------hHHHHHHHHHHhhh
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRYWK 185 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~----------------~l~~vl~~l~~~l~ 185 (465)
.+ ..+.+++|. +++++||+||++.... .++++.+.+..+.
T Consensus 60 ----~~------------------~~v~~t~d~-~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~- 115 (324)
T 3gvi_A 60 ----FD------------------AKFTGANDY-AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA- 115 (324)
T ss_dssp ----CC------------------CCEEEESSG-GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-
T ss_pred ----CC------------------CEEEEeCCH-HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-
Confidence 00 146677887 6899999999997421 2455556665554
Q ss_pred ccCCCCEEEEeecccc
Q 012349 186 ERITVPVIISLAKGVE 201 (465)
Q Consensus 186 ~~~~~~ivIs~~kGi~ 201 (465)
+ +.+++.++|-++
T Consensus 116 p---~a~iivvtNPvd 128 (324)
T 3gvi_A 116 P---EAFVICITNPLD 128 (324)
T ss_dssp T---TCEEEECCSSHH
T ss_pred C---CeEEEecCCCcH
Confidence 3 578888888654
No 105
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.40 E-value=9.2e-07 Score=92.70 Aligned_cols=107 Identities=17% Similarity=0.230 Sum_probs=75.5
Q ss_pred CceEEEECccH--HHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 43 PLRIVGVGAGA--WGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 43 ~mkIaIIGaGa--mGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
.|||+|||+|+ ||++++..|+.. ..+ . .+|.||+++++.+++++. +. .++...
T Consensus 5 ~~KIaVIGaGs~g~g~~la~~l~~~-~~~-~-geV~L~Di~~e~le~~~~------~~-------------~~l~~~--- 59 (450)
T 3fef_A 5 QIKIAYIGGGSQGWARSLMSDLSID-ERM-S-GTVALYDLDFEAAQKNEV------IG-------------NHSGNG--- 59 (450)
T ss_dssp CEEEEEETTTCSSHHHHHHHHHHHC-SSC-C-EEEEEECSSHHHHHHHHH------HH-------------TTSTTS---
T ss_pred CCEEEEECCChhHhHHHHHHHHHhc-ccc-C-CeEEEEeCCHHHHHHHHH------HH-------------HHHhcc---
Confidence 47999999999 789999999874 212 1 389999999876654211 10 011110
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-----------------------------
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------------------- 171 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~----------------------------- 171 (465)
. .++++|+|+++|+++||+||++++..
T Consensus 60 ----~--------------------~~I~~TtD~~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GG 115 (450)
T 3fef_A 60 ----R--------------------WRYEAVSTLKKALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGG 115 (450)
T ss_dssp ----C--------------------EEEEEESSHHHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHH
T ss_pred ----C--------------------CeEEEECCHHHHhcCCCEEEeccccCCcccchhhhhhhhccCccccchhhcCCch
Confidence 0 15788999999999999999999742
Q ss_pred ---------hHHHHHHHHHHhhhccCCCCEEEEeeccccc
Q 012349 172 ---------ETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (465)
Q Consensus 172 ---------~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~ 202 (465)
.+.++++++..+.+ +.++|..+|-++.
T Consensus 116 i~~alr~~~i~~~i~~~i~~~~p----~a~~i~~tNPvdi 151 (450)
T 3fef_A 116 IIRGLRAVPIFAEIARAIRDYAP----ESWVINYTNPMSV 151 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCT----TSEEEECCSSHHH
T ss_pred hhcccccHHHHHHHHHHHHHHCC----CeEEEEecCchHH
Confidence 15566666666543 6889999987654
No 106
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.39 E-value=2.5e-06 Score=85.06 Aligned_cols=108 Identities=15% Similarity=0.193 Sum_probs=68.6
Q ss_pred hcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccc
Q 012349 36 MGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLK 115 (465)
Q Consensus 36 ~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~ 115 (465)
-++....++||+|||+|.||+++|..++.+ |.+ .+|.|+|++++ ... +. .++. ...
T Consensus 7 ~~~~~~~~~kV~ViGaG~vG~~~a~~l~~~-g~~---~ev~L~Di~~~-~~g---~a-~dl~---------------~~~ 62 (303)
T 2i6t_A 7 ANHENKTVNKITVVGGGELGIACTLAISAK-GIA---DRLVLLDLSEG-TKG---AT-MDLE---------------IFN 62 (303)
T ss_dssp -------CCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECCC---------CH-HHHH---------------HHT
T ss_pred ccccCCCCCEEEEECCCHHHHHHHHHHHhc-CCC---CEEEEEcCCcc-hHH---HH-HHHh---------------hhc
Confidence 344444568999999999999999999988 721 28999999875 221 00 0000 000
Q ss_pred hhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc---------------chHHHHHHHH
Q 012349 116 YVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS---------------TETKEVFEEI 180 (465)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps---------------~~l~~vl~~l 180 (465)
. ..++.++|+ +++++||+||+++-. ..++++++++
T Consensus 63 -------~----------------------~~i~~t~d~-~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i 112 (303)
T 2i6t_A 63 -------L----------------------PNVEISKDL-SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPAL 112 (303)
T ss_dssp -------C----------------------TTEEEESCG-GGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHH
T ss_pred -------C----------------------CCeEEeCCH-HHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 146677888 679999999999721 1367777888
Q ss_pred HHhhhccCCCCEEEEeecccc
Q 012349 181 SRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 181 ~~~l~~~~~~~ivIs~~kGi~ 201 (465)
.++. + +.+++.++|-++
T Consensus 113 ~~~~-p---~a~iiv~sNP~~ 129 (303)
T 2i6t_A 113 GHYS-Q---HSVLLVASQPVE 129 (303)
T ss_dssp HHHT-T---TCEEEECSSSHH
T ss_pred HHhC-C---CeEEEEcCChHH
Confidence 7776 3 578878888554
No 107
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.39 E-value=2.2e-06 Score=85.44 Aligned_cols=105 Identities=14% Similarity=0.115 Sum_probs=68.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~-~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
+|||+|||+|.||+.+|..|+.. | + +|.+++++++.++... .+ +... ....
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~-g-----~~~v~L~Di~~~~~~g~~----~d-l~~~-------------~~~~---- 53 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAK-E-----LGDIVLLDIVEGVPQGKA----LD-LYEA-------------SPIE---- 53 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CSEEEEECSSSSHHHHHH----HH-HHTT-------------HHHH----
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-C-----CCeEEEEeCCccHHHHHH----Hh-HHHh-------------Hhhc----
Confidence 37999999999999999999988 7 4 7999999986554210 00 1110 0000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc----------------hHHHHHHHHHHhhh
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRYWK 185 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~----------------~l~~vl~~l~~~l~ 185 (465)
.. ...+..++|. +++++||+||+++... .++++++.+.++.
T Consensus 54 ~~---------------------~~~i~~t~d~-~a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~- 110 (309)
T 1ur5_A 54 GF---------------------DVRVTGTNNY-ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS- 110 (309)
T ss_dssp TC---------------------CCCEEEESCG-GGGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGC-
T ss_pred CC---------------------CeEEEECCCH-HHHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-
Confidence 00 0146777888 6799999999998332 2345556666554
Q ss_pred ccCCCCEEEEeecccc
Q 012349 186 ERITVPVIISLAKGVE 201 (465)
Q Consensus 186 ~~~~~~ivIs~~kGi~ 201 (465)
+ +.+++..+|-++
T Consensus 111 p---~a~vi~~tNPv~ 123 (309)
T 1ur5_A 111 P---NAVIIMVNNPLD 123 (309)
T ss_dssp T---TCEEEECCSSHH
T ss_pred C---CeEEEEcCCchH
Confidence 3 577777787554
No 108
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.38 E-value=1.3e-06 Score=91.77 Aligned_cols=111 Identities=13% Similarity=0.154 Sum_probs=75.8
Q ss_pred CceEEEECccHH-HHHHHHHHHHh-cCCCCCCeeEEEEecCc--hhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhh
Q 012349 43 PLRIVGVGAGAW-GSVFTAMLQDS-YGYLRDKVLIRIWRRPG--RSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (465)
Q Consensus 43 ~mkIaIIGaGam-GsalA~~La~~-~G~~~~~~~V~l~~r~~--~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~ 118 (465)
.|||+|||+|+| |.+++..|+.+ .+ +. .++|.||++++ ++++.++. + .. .+++..
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~-l~-~~ev~L~Di~~~~e~~~~~~~--~----~~------------~~~~~~- 65 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHE-LP-VGELWLVDIPEGKEKLEIVGA--L----AK------------RMVEKA- 65 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTT-CC-EEEEEEECCGGGHHHHHHHHH--H----HH------------HHHHHT-
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCC-CC-CCEEEEEEcCCChHHHHHHHH--H----HH------------HHHhhc-
Confidence 589999999999 88888888872 12 10 27899999998 76654221 0 00 122211
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcch--------------------------
Q 012349 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-------------------------- 172 (465)
Q Consensus 119 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~-------------------------- 172 (465)
..+ ..+.+++|..+++++||+||+++++..
T Consensus 66 ------~~~------------------~~i~~t~D~~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~gg 121 (450)
T 1s6y_A 66 ------GVP------------------IEIHLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGG 121 (450)
T ss_dssp ------TCC------------------CEEEEESCHHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHH
T ss_pred ------CCC------------------cEEEEeCCHHHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccch
Confidence 010 147778899889999999999999743
Q ss_pred ----------HHHHHHHHHHhhhccCCCCEEEEeeccccc
Q 012349 173 ----------TKEVFEEISRYWKERITVPVIISLAKGVEA 202 (465)
Q Consensus 173 ----------l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~ 202 (465)
+.++++++.++.+ +++++..+|-++.
T Consensus 122 i~~~~rni~i~~~i~~~i~~~~P----~a~ii~~tNPvdi 157 (450)
T 1s6y_A 122 LFKGLRTIPVILDIIRDMEELCP----DAWLINFTNPAGM 157 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCT----TCEEEECSSSHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHHCC----CeEEEEeCCcHHH
Confidence 4455666666554 6889999987753
No 109
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.36 E-value=4.1e-06 Score=74.38 Aligned_cols=104 Identities=20% Similarity=0.181 Sum_probs=66.5
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
.++|+|+|+|.||..++..|.+. | ++|++++++++.++.++. ..+ ...+.+
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~-g-----~~V~vid~~~~~~~~~~~--------~~g---------~~~~~~------ 69 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSS-G-----HSVVVVDKNEYAFHRLNS--------EFS---------GFTVVG------ 69 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCGGGGGGSCT--------TCC---------SEEEES------
T ss_pred CCcEEEECCCHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHHHHh--------cCC---------CcEEEe------
Confidence 37899999999999999999988 7 899999999875543110 000 000000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHH-hcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEA-VWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~ea-l~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
+ . .. ...+.++ +.++|+||+++|+......+..+.+.+.+ ...++..+++..
T Consensus 70 d--~-------------------~~---~~~l~~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~---~~~iv~~~~~~~ 122 (155)
T 2g1u_A 70 D--A-------------------AE---FETLKECGMEKADMVFAFTNDDSTNFFISMNARYMFN---VENVIARVYDPE 122 (155)
T ss_dssp C--T-------------------TS---HHHHHTTTGGGCSEEEECSSCHHHHHHHHHHHHHTSC---CSEEEEECSSGG
T ss_pred c--C-------------------CC---HHHHHHcCcccCCEEEEEeCCcHHHHHHHHHHHHHCC---CCeEEEEECCHH
Confidence 0 0 00 0112222 56899999999998776666665554333 456777777765
Q ss_pred c
Q 012349 202 A 202 (465)
Q Consensus 202 ~ 202 (465)
.
T Consensus 123 ~ 123 (155)
T 2g1u_A 123 K 123 (155)
T ss_dssp G
T ss_pred H
Confidence 4
No 110
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.36 E-value=3.4e-06 Score=84.32 Aligned_cols=109 Identities=16% Similarity=0.190 Sum_probs=69.4
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 40 ~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
..+++||+|||+|.+|+++|..++.+ |.. .+|.++|++++.++.. . .++... . .++.
T Consensus 3 ~~~~~kI~IIGaG~vG~sla~~l~~~-~~~---~ev~l~Di~~~~~~~~-~---~dl~~~----------~-~~~~---- 59 (316)
T 1ldn_A 3 NNGGARVVVIGAGFVGASYVFALMNQ-GIA---DEIVLIDANESKAIGD-A---MDFNHG----------K-VFAP---- 59 (316)
T ss_dssp TTTSCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECSSHHHHHHH-H---HHHHHH----------T-TSSS----
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHhC-CCC---CEEEEEeCCcchHHHH-H---hhHHHH----------h-hhcC----
Confidence 34568999999999999999999887 632 4899999987633320 0 011100 0 0010
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc----------------hHHHHHHHHHHh
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRY 183 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~----------------~l~~vl~~l~~~ 183 (465)
.+.+++++..+++++||+||++++.. .+.++++.+.++
T Consensus 60 --------------------------~~~~i~~~~~~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 113 (316)
T 1ldn_A 60 --------------------------KPVDIWHGDYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS 113 (316)
T ss_dssp --------------------------SCCEEEECCGGGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------CCeEEEcCcHHHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH
Confidence 02334444456799999999997643 245566666666
Q ss_pred hhccCCCCEEEEeecccc
Q 012349 184 WKERITVPVIISLAKGVE 201 (465)
Q Consensus 184 l~~~~~~~ivIs~~kGi~ 201 (465)
.+ +.+++..+|-++
T Consensus 114 ~p----~a~~iv~tNPv~ 127 (316)
T 1ldn_A 114 GF----QGLFLVATNPVD 127 (316)
T ss_dssp TC----CSEEEECSSSHH
T ss_pred CC----CCEEEEeCCchH
Confidence 43 567777787654
No 111
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=98.31 E-value=8.3e-07 Score=89.56 Aligned_cols=97 Identities=20% Similarity=0.289 Sum_probs=72.0
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 41 ~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
...|+|+|||+|.||.++|..++.. | ++|.+|+|+++. +. ... .
T Consensus 148 l~g~~vgIIG~G~iG~~iA~~l~~~-G-----~~V~~~d~~~~~-~~---------~~~--------------~------ 191 (334)
T 2dbq_A 148 VYGKTIGIIGLGRIGQAIAKRAKGF-N-----MRILYYSRTRKE-EV---------ERE--------------L------ 191 (334)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCH-HH---------HHH--------------H------
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhC-C-----CEEEEECCCcch-hh---------Hhh--------------c------
Confidence 3458999999999999999999987 7 899999998753 21 000 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcch-HHHHH-HHHHHhhhccCCCCEEEEeec
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVF-EEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~-l~~vl-~~l~~~l~~~~~~~ivIs~~k 198 (465)
++.. .++++++.++|+|++++|... ++.++ +++.+.+++ ++++|++++
T Consensus 192 --------------------------g~~~-~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~---~ailIn~sr 241 (334)
T 2dbq_A 192 --------------------------NAEF-KPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKK---TAILINIAR 241 (334)
T ss_dssp --------------------------CCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCT---TCEEEECSC
T ss_pred --------------------------Cccc-CCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCC---CcEEEECCC
Confidence 1223 467788899999999999875 55555 355566776 688999998
Q ss_pred ccccc
Q 012349 199 GVEAE 203 (465)
Q Consensus 199 Gi~~~ 203 (465)
|-...
T Consensus 242 g~~v~ 246 (334)
T 2dbq_A 242 GKVVD 246 (334)
T ss_dssp GGGBC
T ss_pred CcccC
Confidence 85543
No 112
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.29 E-value=2.3e-06 Score=86.70 Aligned_cols=90 Identities=18% Similarity=0.290 Sum_probs=63.0
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
..++|+|||.|.||.++|..+... | .+|..|+|++... .
T Consensus 170 ~gktiGIIGlG~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~----------------------------~------- 208 (340)
T 4dgs_A 170 KGKRIGVLGLGQIGRALASRAEAF-G-----MSVRYWNRSTLSG----------------------------V------- 208 (340)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSSCCTT----------------------------S-------
T ss_pred cCCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEcCCcccc----------------------------c-------
Confidence 348999999999999999999876 7 8999999876310 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC-cchHHHHH-HHHHHhhhccCCCCEEEEeecc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVF-EEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVp-s~~l~~vl-~~l~~~l~~~~~~~ivIs~~kG 199 (465)
......+++++++.||+|++++| ...++.++ ++..+.+++ ++++|.++.|
T Consensus 209 -------------------------~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~---gailIN~aRG 260 (340)
T 4dgs_A 209 -------------------------DWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGP---EGIVVNVARG 260 (340)
T ss_dssp -------------------------CCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTT---TCEEEECSCC
T ss_pred -------------------------CceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCC---CCEEEECCCC
Confidence 12234678888999999999999 45666666 455566676 6899999888
Q ss_pred c
Q 012349 200 V 200 (465)
Q Consensus 200 i 200 (465)
=
T Consensus 261 ~ 261 (340)
T 4dgs_A 261 N 261 (340)
T ss_dssp -
T ss_pred c
Confidence 3
No 113
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.28 E-value=4.4e-06 Score=83.70 Aligned_cols=106 Identities=16% Similarity=0.176 Sum_probs=65.1
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
++|||+|||+|++|++++..|+.. |.+ .+|.++|.++++++.. ..-+... ..++
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~-~~~---~ev~L~Di~~~~~~g~-----~~dl~~~----------~~~~------- 59 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALR-QTA---NELVLIDVFKEKAIGE-----AMDINHG----------LPFM------- 59 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT-TCS---SEEEEECCC---CCHH-----HHHHTTS----------CCCT-------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCC---CEEEEEeCChHHHHHH-----HHHHHHh----------HHhc-------
Confidence 458999999999999999999988 621 2899999997654420 0001100 0000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcch----------------HHHHHHHHHHhhh
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE----------------TKEVFEEISRYWK 185 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~----------------l~~vl~~l~~~l~ 185 (465)
.+++++.+..+++++||+||++++... ++++++.+.++.
T Consensus 60 ------------------------~~~~i~~~~~~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~- 114 (318)
T 1y6j_A 60 ------------------------GQMSLYAGDYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY- 114 (318)
T ss_dssp ------------------------TCEEEC--CGGGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred ------------------------CCeEEEECCHHHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhC-
Confidence 123333233567999999999986532 567777777763
Q ss_pred ccCCCCEEEEeecccc
Q 012349 186 ERITVPVIISLAKGVE 201 (465)
Q Consensus 186 ~~~~~~ivIs~~kGi~ 201 (465)
+ +.+++..+|-++
T Consensus 115 p---~a~viv~tNPv~ 127 (318)
T 1y6j_A 115 N---HGVILVVSNPVD 127 (318)
T ss_dssp C---SCEEEECSSSHH
T ss_pred C---CcEEEEecCcHH
Confidence 3 567777777554
No 114
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=98.28 E-value=9.6e-07 Score=88.91 Aligned_cols=94 Identities=17% Similarity=0.235 Sum_probs=68.9
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
..|+|+|||+|.||.++|..++.. | ++|.+|+|+.+..+. ... .
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~-G-----~~V~~~d~~~~~~~~---------~~~--------------~------- 197 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPF-G-----VQRFLYTGRQPRPEE---------AAE--------------F------- 197 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGG-T-----CCEEEEESSSCCHHH---------HHT--------------T-------
T ss_pred CCCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEECCCCcchhH---------HHh--------------c-------
Confidence 357999999999999999999877 7 899999998653321 000 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH-HHHHHhhhccCCCCEEEEeecc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl-~~l~~~l~~~~~~~ivIs~~kG 199 (465)
.+..+ ++++++.++|+|++++|.. .++.++ +++.+.+++ ++++|+++.|
T Consensus 198 -------------------------g~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~---gailIn~srg 248 (330)
T 2gcg_A 198 -------------------------QAEFV-STPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKE---TAVFINISRG 248 (330)
T ss_dssp -------------------------TCEEC-CHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCT---TCEEEECSCG
T ss_pred -------------------------CceeC-CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCC---CcEEEECCCC
Confidence 12333 7778889999999999975 445555 345556665 6888888887
Q ss_pred c
Q 012349 200 V 200 (465)
Q Consensus 200 i 200 (465)
-
T Consensus 249 ~ 249 (330)
T 2gcg_A 249 D 249 (330)
T ss_dssp G
T ss_pred c
Confidence 3
No 115
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.27 E-value=2.7e-06 Score=72.97 Aligned_cols=38 Identities=18% Similarity=0.189 Sum_probs=33.4
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
.|+|+|+|+|.+|..++..|.+. | ++|++++++++.++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~-g-----~~v~~~d~~~~~~~ 41 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEK-G-----HDIVLIDIDKDICK 41 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CeEEEEECCHHHHH
Confidence 37999999999999999999988 7 89999999876544
No 116
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=98.21 E-value=1.9e-06 Score=85.46 Aligned_cols=92 Identities=12% Similarity=0.162 Sum_probs=69.3
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
.-++|+|||.|.||..+|..+... | .+|..|+|+++..+
T Consensus 121 ~g~tvGIIGlG~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~----------------------------------- 159 (290)
T 3gvx_A 121 YGKALGILGYGGIGRRVAHLAKAF-G-----MRVIAYTRSSVDQN----------------------------------- 159 (290)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-T-----CEEEEECSSCCCTT-----------------------------------
T ss_pred ecchheeeccCchhHHHHHHHHhh-C-----cEEEEEeccccccc-----------------------------------
Confidence 347999999999999999999987 7 89999998763211
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc-chHHHHH-HHHHHhhhccCCCCEEEEeecc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVF-EEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps-~~l~~vl-~~l~~~l~~~~~~~ivIs~~kG 199 (465)
.....++++++++.+|+|++++|. ..++.++ ++..+.+++ ++++|.++.|
T Consensus 160 -------------------------~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~---gailIN~aRG 211 (290)
T 3gvx_A 160 -------------------------VDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARK---NLTIVNVARA 211 (290)
T ss_dssp -------------------------CSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCT---TCEEEECSCG
T ss_pred -------------------------cccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhc---CceEEEeehh
Confidence 122345788889999999999994 4555544 445555666 7899998877
Q ss_pred ccc
Q 012349 200 VEA 202 (465)
Q Consensus 200 i~~ 202 (465)
-..
T Consensus 212 ~~v 214 (290)
T 3gvx_A 212 DVV 214 (290)
T ss_dssp GGB
T ss_pred ccc
Confidence 443
No 117
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.19 E-value=1.4e-05 Score=79.97 Aligned_cols=41 Identities=22% Similarity=0.244 Sum_probs=34.0
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
+.|||+|||+|++|++++..|+.. +.+ .++.|+|+++++++
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~-~~~---~el~L~Di~~~~~~ 44 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQ-GIA---EEFVIVDVVKDRTK 44 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECSSHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcC-CCC---CEEEEEeCCchHHH
Confidence 348999999999999999999988 632 38999999876544
No 118
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.18 E-value=1.6e-05 Score=79.81 Aligned_cols=105 Identities=13% Similarity=0.143 Sum_probs=68.9
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~-~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
+|||+|||+|.||+++|..|+.+ | . +|.+|+++++.++.. ..-++.. ..+.
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~-~-----~~~v~l~Di~~~~~~g~-----a~dL~~~-----------~~~~------ 56 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIK-Q-----LGDVVLFDIAQGMPNGK-----ALDLLQT-----------CPIE------ 56 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECSSSSHHHHH-----HHHHHTT-----------HHHH------
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CceEEEEeCChHHHHHH-----HHHHHhh-----------hhhc------
Confidence 47999999999999999999988 6 4 899999998755421 0001110 0000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc----------------hHHHHHHHHHHhhh
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRYWK 185 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~----------------~l~~vl~~l~~~l~ 185 (465)
+. + ..+..++|. +++++||+||++.... .++++.+.+..+.+
T Consensus 57 ~~---------------~------~~v~~t~d~-~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p 114 (321)
T 3p7m_A 57 GV---------------D------FKVRGTNDY-KDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCP 114 (321)
T ss_dssp TC---------------C------CCEEEESCG-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred CC---------------C------cEEEEcCCH-HHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCC
Confidence 00 0 145666775 6799999999997321 24555566666543
Q ss_pred ccCCCCEEEEeecccc
Q 012349 186 ERITVPVIISLAKGVE 201 (465)
Q Consensus 186 ~~~~~~ivIs~~kGi~ 201 (465)
+.+++.++|-++
T Consensus 115 ----~a~vivvtNPvd 126 (321)
T 3p7m_A 115 ----NAFVICITNPLD 126 (321)
T ss_dssp ----TCEEEECCSSHH
T ss_pred ----CcEEEEecCchH
Confidence 577887887654
No 119
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.18 E-value=1.5e-05 Score=79.88 Aligned_cols=34 Identities=18% Similarity=0.247 Sum_probs=31.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~-~V~l~~r~~ 82 (465)
++||+|||+|.||+++|..++.+ | + +|.+|++++
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~-g-----~~~v~l~D~~~ 42 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQK-E-----LADVVLVDIPQ 42 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEeccc
Confidence 47999999999999999999988 7 7 999999983
No 120
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.18 E-value=1.3e-05 Score=79.82 Aligned_cols=104 Identities=21% Similarity=0.232 Sum_probs=70.0
Q ss_pred eEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhcCC
Q 012349 45 RIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDR 124 (465)
Q Consensus 45 kIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~~ 124 (465)
||+|||+|.+|+++|..++.+ |. .+|.|+|++++.++.. . .+ +... ... . +.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-~l----~el~L~Di~~~~~~g~-~---~d-l~~~-----------~~~--~----~~- 52 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-GY----DDLLLIARTPGKPQGE-A---LD-LAHA-----------AAE--L----GV- 52 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-TC----SCEEEECSSTTHHHHH-H---HH-HHHH-----------HHH--H----TC-
T ss_pred CEEEECcCHHHHHHHHHHHhC-CC----CEEEEEcCChhhHHHH-H---HH-HHHh-----------hhh--c----CC-
Confidence 799999999999999999988 62 2799999998655421 0 00 1100 000 0 00
Q ss_pred cccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcch----------------HHHHHHHHHHhhhccC
Q 012349 125 TLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE----------------TKEVFEEISRYWKERI 188 (465)
Q Consensus 125 ~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~----------------l~~vl~~l~~~l~~~~ 188 (465)
...+..++|. +++++||+||++.+... ++++++++.++.+
T Consensus 53 --------------------~~~i~~t~d~-~a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p--- 108 (308)
T 2d4a_B 53 --------------------DIRISGSNSY-EDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAK--- 108 (308)
T ss_dssp --------------------CCCEEEESCG-GGGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCT---
T ss_pred --------------------CeEEEECCCH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCC---
Confidence 0146677787 67999999999975433 7777777777753
Q ss_pred CCCEEEEeecccc
Q 012349 189 TVPVIISLAKGVE 201 (465)
Q Consensus 189 ~~~ivIs~~kGi~ 201 (465)
+.+++.++|-++
T Consensus 109 -~a~iiv~tNPv~ 120 (308)
T 2d4a_B 109 -DAIVVITTNPVD 120 (308)
T ss_dssp -TCEEEECCSSHH
T ss_pred -CeEEEEeCCchH
Confidence 567777888554
No 121
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.18 E-value=1.3e-05 Score=80.54 Aligned_cols=109 Identities=19% Similarity=0.231 Sum_probs=69.5
Q ss_pred CCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhh
Q 012349 39 AEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (465)
Q Consensus 39 ~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~ 118 (465)
...+.|||+|||+|++|++++..|+.. +.+ .++.|+|++++.++... .+ +... .+.
T Consensus 5 ~~~~~~KI~IiGaG~vG~~la~~l~~~-~~~---~el~L~Di~~~~~~g~~----~d-l~~~-------------~~~-- 60 (326)
T 2zqz_A 5 TDKDHQKVILVGDGAVGSSYAYAMVLQ-GIA---QEIGIVDIFKDKTKGDA----ID-LSNA-------------LPF-- 60 (326)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECSCHHHHHHHH----HH-HHTT-------------GGG--
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHcC-CCC---CEEEEEeCCchHhHHHH----HH-HHHH-------------HHh--
Confidence 445668999999999999999999988 632 38999999876544210 00 1100 010
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcch----------------HHHHHHHHHH
Q 012349 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE----------------TKEVFEEISR 182 (465)
Q Consensus 119 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~----------------l~~vl~~l~~ 182 (465)
..+++++.+..+++++||+||++.+... ++++.+.+.+
T Consensus 61 --------------------------~~~~~i~~~~~~a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~ 114 (326)
T 2zqz_A 61 --------------------------TSPKKIYSAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVD 114 (326)
T ss_dssp --------------------------SCCCEEEECCGGGGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------cCCeEEEECCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0133444455678999999999985432 4445555555
Q ss_pred hhhccCCCCEEEEeecccc
Q 012349 183 YWKERITVPVIISLAKGVE 201 (465)
Q Consensus 183 ~l~~~~~~~ivIs~~kGi~ 201 (465)
+. + +.+++.++|-++
T Consensus 115 ~~-p---~a~iiv~tNPv~ 129 (326)
T 2zqz_A 115 SG-F---NGIFLVAANPVD 129 (326)
T ss_dssp HT-C---CSEEEECSSSHH
T ss_pred HC-C---CeEEEEeCCcHH
Confidence 53 3 577777887664
No 122
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.17 E-value=1.4e-05 Score=80.46 Aligned_cols=41 Identities=17% Similarity=0.166 Sum_probs=34.3
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
.+|||+|||+|.||+++|..|+.. |.+ .+|.+++++++.++
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~-~~~---~~l~l~D~~~~k~~ 44 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQ-GIT---DELVVIDVNKEKAM 44 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECSCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCC---ceEEEEecchHHHH
Confidence 458999999999999999999988 732 38999999876544
No 123
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.16 E-value=1.2e-05 Score=80.40 Aligned_cols=41 Identities=22% Similarity=0.240 Sum_probs=34.0
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
++|||+|||+|++|++++..|+.+ |.+ .+|.+++++++.++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~-~~~---~ei~L~Di~~~~~~ 45 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ-SIV---DELVIIDLDTEKVR 45 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-CSC---SEEEEECSCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCC---CEEEEEeCChhHhh
Confidence 458999999999999999999988 632 48999999876443
No 124
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=98.16 E-value=2e-06 Score=86.83 Aligned_cols=97 Identities=22% Similarity=0.324 Sum_probs=71.5
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 40 ~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
+...++|+|||+|.||.++|..+... | ++|.+|+|+++. +. ... .
T Consensus 143 ~l~g~~vgIIG~G~iG~~vA~~l~~~-G-----~~V~~~d~~~~~-~~---------~~~--------------~----- 187 (333)
T 2d0i_A 143 SLYGKKVGILGMGAIGKAIARRLIPF-G-----VKLYYWSRHRKV-NV---------EKE--------------L----- 187 (333)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGG-T-----CEEEEECSSCCH-HH---------HHH--------------H-----
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEECCCcch-hh---------hhh--------------c-----
Confidence 34458999999999999999999877 7 899999998753 11 000 0
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHHH-HHHHhhhccCCCCEEEEee
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFE-EISRYWKERITVPVIISLA 197 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl~-~l~~~l~~~~~~~ivIs~~ 197 (465)
.+.. .++++++.++|+|++++|.. .++.++. ++.+.+++ + ++|.++
T Consensus 188 ---------------------------g~~~-~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~---g-ilin~s 235 (333)
T 2d0i_A 188 ---------------------------KARY-MDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEG---K-YLVNIG 235 (333)
T ss_dssp ---------------------------TEEE-CCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBT---C-EEEECS
T ss_pred ---------------------------Ccee-cCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCC---C-EEEECC
Confidence 1223 36778889999999999987 6666664 34556676 7 888999
Q ss_pred cccccc
Q 012349 198 KGVEAE 203 (465)
Q Consensus 198 kGi~~~ 203 (465)
+|-..+
T Consensus 236 rg~~vd 241 (333)
T 2d0i_A 236 RGALVD 241 (333)
T ss_dssp CGGGBC
T ss_pred CCcccC
Confidence 886554
No 125
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.15 E-value=3e-06 Score=82.93 Aligned_cols=120 Identities=21% Similarity=0.230 Sum_probs=76.7
Q ss_pred CCCeeEeecchhHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhh
Q 012349 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHL 93 (465)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l 93 (465)
.+|-+..+|-...--+.-|++. +. +...++|+|||+|.||.+++..|.+. | .+|++|+|+++.++.+
T Consensus 102 ~~g~~~g~nTd~~G~~~~l~~~-~~-~~~~~~v~iiGaG~~g~aia~~L~~~-g-----~~V~v~~r~~~~~~~l----- 168 (275)
T 2hk9_A 102 ENGKAYGYNTDWIGFLKSLKSL-IP-EVKEKSILVLGAGGASRAVIYALVKE-G-----AKVFLWNRTKEKAIKL----- 168 (275)
T ss_dssp ETTEEEEECCHHHHHHHHHHHH-CT-TGGGSEEEEECCSHHHHHHHHHHHHH-T-----CEEEEECSSHHHHHHH-----
T ss_pred eCCEEEeecCCHHHHHHHHHHh-CC-CcCCCEEEEECchHHHHHHHHHHHHc-C-----CEEEEEECCHHHHHHH-----
Confidence 4565566665544444444432 21 22347999999999999999999998 7 7899999987644321
Q ss_pred HHHHhchhhhHHhhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchH
Q 012349 94 FEVINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTET 173 (465)
Q Consensus 94 ~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l 173 (465)
.+ .+ ++.+.+++.+++.++|+||.|||....
T Consensus 169 ----~~-------------~~--------------------------------g~~~~~~~~~~~~~aDiVi~atp~~~~ 199 (275)
T 2hk9_A 169 ----AQ-------------KF--------------------------------PLEVVNSPEEVIDKVQVIVNTTSVGLK 199 (275)
T ss_dssp ----TT-------------TS--------------------------------CEEECSCGGGTGGGCSEEEECSSTTSS
T ss_pred ----HH-------------Hc--------------------------------CCeeehhHHhhhcCCCEEEEeCCCCCC
Confidence 00 00 233344666778899999999998754
Q ss_pred HHHHHHH-HHhhhccCCCCEEEEeec
Q 012349 174 KEVFEEI-SRYWKERITVPVIISLAK 198 (465)
Q Consensus 174 ~~vl~~l-~~~l~~~~~~~ivIs~~k 198 (465)
.++...+ .+.+++ +++++.+.-
T Consensus 200 ~~~~~~i~~~~l~~---g~~viDv~~ 222 (275)
T 2hk9_A 200 DEDPEIFNYDLIKK---DHVVVDIIY 222 (275)
T ss_dssp TTCCCSSCGGGCCT---TSEEEESSS
T ss_pred CCCCCCCCHHHcCC---CCEEEEcCC
Confidence 3211112 234554 577777765
No 126
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.11 E-value=1.8e-05 Score=79.18 Aligned_cols=39 Identities=10% Similarity=0.155 Sum_probs=33.5
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
|||+|||+|.||+++|..|+.+ |.+ .+|.+++++++.++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~-~~~---~el~l~D~~~~k~~ 39 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ-DVA---KEVVMVDIKDGMPQ 39 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCS---SEEEEECSSTTHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCC---CEEEEEeCchHHHH
Confidence 7999999999999999999988 632 38999999986544
No 127
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.11 E-value=1.6e-05 Score=80.01 Aligned_cols=107 Identities=8% Similarity=-0.044 Sum_probs=71.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
..+||+|||+|.||+++|..++.+ |.+ ++|.+++++++.++.... + ++.. . .+..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~-g~~---~ev~L~Di~~~~~~g~a~----D-L~~~---------~-~~~~------ 74 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMK-DLA---DEVALVDVMEDKLKGEMM----D-LEHG---------S-LFLH------ 74 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHH-CCC---SEEEEECSCHHHHHHHHH----H-HHHH---------G-GGSC------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCC---CeEEEEECCHHHHHHHHH----H-hhhh---------h-hccc------
Confidence 358999999999999999999998 732 389999998765442100 0 1100 0 0000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc----------------chHHHHHHHHHHhhh
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS----------------TETKEVFEEISRYWK 185 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps----------------~~l~~vl~~l~~~l~ 185 (465)
...+..++|+++ +++||+||++... ..++++.+++.++.
T Consensus 75 -----------------------~~~i~~t~d~~~-~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~- 129 (330)
T 3ldh_A 75 -----------------------TAKIVSGKDYSV-SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHS- 129 (330)
T ss_dssp -----------------------CSEEEEESSSCS-CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHC-
T ss_pred -----------------------CCeEEEcCCHHH-hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-
Confidence 024666788865 8999999998632 13566667777763
Q ss_pred ccCCCCEEEEeecccc
Q 012349 186 ERITVPVIISLAKGVE 201 (465)
Q Consensus 186 ~~~~~~ivIs~~kGi~ 201 (465)
+ +.+++.++|-++
T Consensus 130 P---~a~ilvvtNPvd 142 (330)
T 3ldh_A 130 P---DCLKELHPELGT 142 (330)
T ss_dssp T---TCEEEECSSSHH
T ss_pred C---CceEEeCCCccH
Confidence 3 678888887654
No 128
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=98.10 E-value=3.8e-06 Score=85.21 Aligned_cols=95 Identities=19% Similarity=0.175 Sum_probs=68.5
Q ss_pred CCCceEEEECccHHHHHHHHHHH-HhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 41 GDPLRIVGVGAGAWGSVFTAMLQ-DSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 41 ~~~mkIaIIGaGamGsalA~~La-~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
...++|+|||.|.||.++|..+. .. | .+|..|+|+++..+. ... +
T Consensus 161 l~g~~vgIIG~G~IG~~vA~~l~~~~-G-----~~V~~~d~~~~~~~~---------~~~--------------~----- 206 (348)
T 2w2k_A 161 PRGHVLGAVGLGAIQKEIARKAVHGL-G-----MKLVYYDVAPADAET---------EKA--------------L----- 206 (348)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTT-C-----CEEEEECSSCCCHHH---------HHH--------------H-----
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHhc-C-----CEEEEECCCCcchhh---------Hhh--------------c-----
Confidence 34579999999999999999998 66 7 899999998753321 000 0
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH-HHHHHhhhccCCCCEEEEee
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLA 197 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl-~~l~~~l~~~~~~~ivIs~~ 197 (465)
++...++++++++++|+|++++|.. .++.++ +++.+.+++ ++++|.++
T Consensus 207 ---------------------------g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~---gailin~s 256 (348)
T 2w2k_A 207 ---------------------------GAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKP---GSRIVNTA 256 (348)
T ss_dssp ---------------------------TCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCT---TEEEEECS
T ss_pred ---------------------------CcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCC---CCEEEECC
Confidence 1223357778889999999999975 455555 344456665 67888887
Q ss_pred cc
Q 012349 198 KG 199 (465)
Q Consensus 198 kG 199 (465)
.|
T Consensus 257 rg 258 (348)
T 2w2k_A 257 RG 258 (348)
T ss_dssp CG
T ss_pred CC
Confidence 77
No 129
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.09 E-value=2.4e-05 Score=78.71 Aligned_cols=43 Identities=23% Similarity=0.233 Sum_probs=35.2
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 40 ~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
....|||+|||+|.+|+++|..|+.. |.+ .++.+++++++.++
T Consensus 6 ~~~~~kV~ViGaG~vG~~~a~~l~~~-~~~---~el~l~D~~~~k~~ 48 (326)
T 3vku_A 6 DKDHQKVILVGDGAVGSSYAYAMVLQ-GIA---QEIGIVDIFKDKTK 48 (326)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECSCHHHHH
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC-CCC---CeEEEEeCChHHHH
Confidence 34568999999999999999999988 732 38999999876544
No 130
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.06 E-value=1e-05 Score=75.79 Aligned_cols=103 Identities=14% Similarity=0.139 Sum_probs=67.6
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhcC
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (465)
|||.|+|+|.+|..+|..|.+. | ++|++++++++.++.+.. ..+ ..... ++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~-g-----~~v~vid~~~~~~~~l~~--------~~~---------~~~i~------gd 51 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR-K-----YGVVIINKDRELCEEFAK--------KLK---------ATIIH------GD 51 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT-T-----CCEEEEESCHHHHHHHHH--------HSS---------SEEEE------SC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHHHHH--------HcC---------CeEEE------cC
Confidence 7899999999999999999988 7 899999999876553110 000 00010 00
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHH-hcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccccc
Q 012349 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEA-VWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (465)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~ea-l~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~ 202 (465)
..-...++++ +.++|+||++++.+.....+..+...+.+ ...+++.++.-..
T Consensus 52 ------------------------~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~---~~~iia~~~~~~~ 104 (218)
T 3l4b_C 52 ------------------------GSHKEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDFG---VKRVVSLVNDPGN 104 (218)
T ss_dssp ------------------------TTSHHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHHTSC---CCEEEECCCSGGG
T ss_pred ------------------------CCCHHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHHHcC---CCeEEEEEeCcch
Confidence 0000123333 67899999999999887777666654333 3567776665543
No 131
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.04 E-value=4.8e-06 Score=83.43 Aligned_cols=94 Identities=23% Similarity=0.373 Sum_probs=68.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
-++|+|||.|.||.++|..+... | .+|..|+|+++..+. ..
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~~--------------------------~~------- 179 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAW-G-----FPLRCWSRSRKSWPG--------------------------VE------- 179 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTT-T-----CCEEEEESSCCCCTT--------------------------CE-------
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEEcCCchhhhh--------------------------hh-------
Confidence 47999999999999999999876 7 899999998642210 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC-cchHHHHH-HHHHHhhhccCCCCEEEEeeccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVF-EEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVp-s~~l~~vl-~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
......+++++++.+|+|++++| ...++.++ ++....+++ ++++|.++.|=
T Consensus 180 ------------------------~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~---gailIN~aRG~ 232 (315)
T 3pp8_A 180 ------------------------SYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPD---GAYVLNLARGV 232 (315)
T ss_dssp ------------------------EEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCT---TEEEEECSCGG
T ss_pred ------------------------hhcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCC---CCEEEECCCCh
Confidence 00012467788999999999999 44666665 444555666 68899888874
Q ss_pred cc
Q 012349 201 EA 202 (465)
Q Consensus 201 ~~ 202 (465)
..
T Consensus 233 ~v 234 (315)
T 3pp8_A 233 HV 234 (315)
T ss_dssp GB
T ss_pred hh
Confidence 33
No 132
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=97.99 E-value=8.3e-06 Score=81.32 Aligned_cols=94 Identities=19% Similarity=0.300 Sum_probs=64.0
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 41 ~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
...++|+|||+|.||.+++..|++..| .++|.+|+|+++.++++ .+. +.
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g----~~~V~v~dr~~~~~~~l---------~~~-------------~~----- 181 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFS----FKEVRIWNRTKENAEKF---------ADT-------------VQ----- 181 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCC----CSEEEEECSSHHHHHHH---------HHH-------------SS-----
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCC----CcEEEEEcCCHHHHHHH---------HHH-------------hh-----
Confidence 356899999999999999999987523 14899999998755431 000 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEee
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~ 197 (465)
..+...++++++++++|+||+|||+. ..++.. +++++ +++|+++.
T Consensus 182 -------------------------~~~~~~~~~~e~v~~aDiVi~atp~~--~~v~~~--~~l~~---g~~vi~~g 226 (312)
T 2i99_A 182 -------------------------GEVRVCSSVQEAVAGADVIITVTLAT--EPILFG--EWVKP---GAHINAVG 226 (312)
T ss_dssp -------------------------SCCEECSSHHHHHTTCSEEEECCCCS--SCCBCG--GGSCT---TCEEEECC
T ss_pred -------------------------CCeEEeCCHHHHHhcCCEEEEEeCCC--CcccCH--HHcCC---CcEEEeCC
Confidence 01345678888899999999999963 333322 45555 56666653
No 133
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=97.97 E-value=3.4e-05 Score=76.92 Aligned_cols=39 Identities=18% Similarity=0.135 Sum_probs=33.0
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
|||+|||+|++|++++..|+.+ +.+ .++.|+|+++++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~-~~~---~el~L~Di~~~k~~ 39 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALL-GVA---REVVLVDLDRKLAQ 39 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCC---SEEEEECSSHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCC---CEEEEEeCChhHHH
Confidence 7999999999999999999987 532 58999999876544
No 134
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.97 E-value=1.7e-05 Score=68.90 Aligned_cols=40 Identities=13% Similarity=0.170 Sum_probs=34.8
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (465)
.+++|.|+|+|.+|..++..|.+. | ++|++++++++.++.
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~-g-----~~V~~id~~~~~~~~ 44 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAA-G-----KKVLAVDKSKEKIEL 44 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESCHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-C-----CeEEEEECCHHHHHH
Confidence 356899999999999999999998 7 899999999876553
No 135
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.97 E-value=1.9e-05 Score=65.61 Aligned_cols=40 Identities=23% Similarity=0.282 Sum_probs=34.0
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
++|+|+|+|+|.||.+++..|.+. | .++|++++|+++..+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~-g----~~~v~~~~r~~~~~~ 43 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTS-S----NYSVTVADHDLAALA 43 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHC-S----SEEEEEEESCHHHHH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhC-C----CceEEEEeCCHHHHH
Confidence 357999999999999999999988 5 278999999886544
No 136
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.96 E-value=7.2e-05 Score=65.23 Aligned_cols=42 Identities=21% Similarity=0.175 Sum_probs=36.4
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012349 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (465)
Q Consensus 40 ~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (465)
+....+|.|+|+|.||..+|..|.+. | ++|++++++++.++.
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~-g-----~~v~vid~~~~~~~~ 45 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLAS-D-----IPLVVIETSRTRVDE 45 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESCHHHHHH
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEECCHHHHHH
Confidence 34457899999999999999999988 7 899999999876654
No 137
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=97.94 E-value=1.2e-05 Score=81.81 Aligned_cols=97 Identities=25% Similarity=0.293 Sum_probs=68.8
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 41 ~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
..-++|+|||.|.||..+|..+... | .+|..|+|++...+. ....
T Consensus 162 l~gktvGIIG~G~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~~--------------------------~~~~--- 206 (351)
T 3jtm_A 162 LEGKTIGTVGAGRIGKLLLQRLKPF-G-----CNLLYHDRLQMAPEL--------------------------EKET--- 206 (351)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGG-C-----CEEEEECSSCCCHHH--------------------------HHHH---
T ss_pred ccCCEEeEEEeCHHHHHHHHHHHHC-C-----CEEEEeCCCccCHHH--------------------------HHhC---
Confidence 3457999999999999999999876 7 889999987632221 0000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH-HHHHHhhhccCCCCEEEEeec
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl-~~l~~~l~~~~~~~ivIs~~k 198 (465)
++....+++++++.+|+|++++|.. .++.++ ++....+++ ++++|.++.
T Consensus 207 --------------------------g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~---gailIN~aR 257 (351)
T 3jtm_A 207 --------------------------GAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKK---GVLIVNNAR 257 (351)
T ss_dssp --------------------------CCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCT---TEEEEECSC
T ss_pred --------------------------CCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCC---CCEEEECcC
Confidence 2334467889999999999999953 444444 334445665 688988887
Q ss_pred ccc
Q 012349 199 GVE 201 (465)
Q Consensus 199 Gi~ 201 (465)
|=.
T Consensus 258 G~~ 260 (351)
T 3jtm_A 258 GAI 260 (351)
T ss_dssp GGG
T ss_pred chh
Confidence 743
No 138
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=97.93 E-value=7.7e-06 Score=71.68 Aligned_cols=38 Identities=18% Similarity=0.141 Sum_probs=32.9
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
.+||+|||+|.||.+++..|... | ++|++|+|+++..+
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~-g-----~~v~v~~r~~~~~~ 58 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP-Q-----YKVTVAGRNIDHVR 58 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT-T-----CEEEEEESCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CEEEEEcCCHHHHH
Confidence 46999999999999999999877 6 67999999986544
No 139
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=97.93 E-value=1.1e-05 Score=86.35 Aligned_cols=97 Identities=20% Similarity=0.223 Sum_probs=71.9
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 41 ~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
...++|+|||.|.||.++|..|... | .+|..|+++... +. ... +
T Consensus 140 l~g~~vgIIG~G~IG~~vA~~l~~~-G-----~~V~~~d~~~~~-~~---------a~~--------------~------ 183 (529)
T 1ygy_A 140 IFGKTVGVVGLGRIGQLVAQRIAAF-G-----AYVVAYDPYVSP-AR---------AAQ--------------L------ 183 (529)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECTTSCH-HH---------HHH--------------H------
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhC-C-----CEEEEECCCCCh-hH---------HHh--------------c------
Confidence 3458999999999999999999877 7 899999987631 11 000 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHHHH-HHHhhhccCCCCEEEEeec
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFEE-ISRYWKERITVPVIISLAK 198 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl~~-l~~~l~~~~~~~ivIs~~k 198 (465)
.+... +++++++.||+|++++|.. .++.++.+ +.+.+++ +++++.+++
T Consensus 184 --------------------------g~~~~-~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~---g~ilin~ar 233 (529)
T 1ygy_A 184 --------------------------GIELL-SLDDLLARADFISVHLPKTPETAGLIDKEALAKTKP---GVIIVNAAR 233 (529)
T ss_dssp --------------------------TCEEC-CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCT---TEEEEECSC
T ss_pred --------------------------CcEEc-CHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCC---CCEEEECCC
Confidence 12222 6778889999999999987 77777755 6566776 688999998
Q ss_pred ccccc
Q 012349 199 GVEAE 203 (465)
Q Consensus 199 Gi~~~ 203 (465)
|-...
T Consensus 234 g~iv~ 238 (529)
T 1ygy_A 234 GGLVD 238 (529)
T ss_dssp TTSBC
T ss_pred Cchhh
Confidence 85443
No 140
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=97.88 E-value=5.6e-05 Score=76.18 Aligned_cols=108 Identities=10% Similarity=0.080 Sum_probs=70.2
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 41 ~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
...+||+|||+|.||+++|..|+.+ |.. .+|.|++++++.++.... | ++.. . .+ +
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~-~~~---~el~L~Di~~~~~~g~a~----D-L~~~---------~-~~-~----- 71 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMK-DLA---DELALVDVIEDKLKGEMM----D-LQHG---------S-LF-L----- 71 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHT-TCC---SEEEEECSCHHHHHHHHH----H-HHHT---------G-GG-C-----
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-CCC---ceEEEEeCChHHHHHHHH----h-hhhh---------h-hc-c-----
Confidence 4568999999999999999999988 621 389999998765442100 0 1100 0 00 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC--c--------------chHHHHHHHHHHhh
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP--S--------------TETKEVFEEISRYW 184 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVp--s--------------~~l~~vl~~l~~~l 184 (465)
. ...+..++|.+ ++++||+||++.- . ..++++.+.+.++.
T Consensus 72 --~---------------------~~~i~~~~d~~-~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~ 127 (331)
T 4aj2_A 72 --K---------------------TPKIVSSKDYS-VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYS 127 (331)
T ss_dssp --S---------------------CCEEEECSSGG-GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred --C---------------------CCeEEEcCCHH-HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHC
Confidence 0 01345567776 5899999999862 2 13556666666663
Q ss_pred hccCCCCEEEEeecccc
Q 012349 185 KERITVPVIISLAKGVE 201 (465)
Q Consensus 185 ~~~~~~~ivIs~~kGi~ 201 (465)
+ +.+++.++|-++
T Consensus 128 p----~a~vlvvtNPvd 140 (331)
T 4aj2_A 128 P----QCKLLIVSNPVD 140 (331)
T ss_dssp T----TCEEEECSSSHH
T ss_pred C----CeEEEEecChHH
Confidence 3 578888888654
No 141
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.87 E-value=2.3e-05 Score=79.57 Aligned_cols=42 Identities=21% Similarity=0.352 Sum_probs=33.1
Q ss_pred CCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012349 39 AEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (465)
Q Consensus 39 ~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (465)
-+++.|||+|+|||.+|..++..|++. ++|++++++.+.+++
T Consensus 12 ~~g~~mkilvlGaG~vG~~~~~~L~~~-------~~v~~~~~~~~~~~~ 53 (365)
T 3abi_A 12 IEGRHMKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNNENLEK 53 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCHHHHHH
T ss_pred ccCCccEEEEECCCHHHHHHHHHHhcC-------CCeEEEEcCHHHHHH
Confidence 456679999999999999999999765 789999998765543
No 142
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=97.87 E-value=0.00011 Score=72.74 Aligned_cols=107 Identities=12% Similarity=0.066 Sum_probs=68.3
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhcC
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (465)
|||+|||+|.+|+++|..|+.+ +.. .++.|+|.+++.++- +.+ | ++.. ..+++ .
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~-~~~---~el~L~Di~~~~~~G---~a~-D-L~h~----------~~~~~-------~ 54 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN-LDV---DEIALVDIAEDLAVG---EAM-D-LAHA----------AAGID-------K 54 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-SCC---SEEEEECSSHHHHHH---HHH-H-HHHH----------HGGGT-------C
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCC---CEEEEEeCCCCcchh---hhh-h-hhcc----------cccCC-------C
Confidence 8999999999999999999988 643 479999998754331 110 0 1100 00111 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--Ccc--------------hHHHHHHHHHHhhhcc
Q 012349 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PST--------------ETKEVFEEISRYWKER 187 (465)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaV--ps~--------------~l~~vl~~l~~~l~~~ 187 (465)
+ ..+..++|.+ ++++||+||++- |.. -++++.+++.++.+
T Consensus 55 ---------------~------~~i~~~~d~~-~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p-- 110 (294)
T 2x0j_A 55 ---------------Y------PKIVGGADYS-LLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAP-- 110 (294)
T ss_dssp ---------------C------CEEEEESCGG-GGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTST--
T ss_pred ---------------C------CeEecCCCHH-HhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCC--
Confidence 0 1345566774 589999999976 221 24555556655543
Q ss_pred CCCCEEEEeeccccc
Q 012349 188 ITVPVIISLAKGVEA 202 (465)
Q Consensus 188 ~~~~ivIs~~kGi~~ 202 (465)
+.+++.++|-++.
T Consensus 111 --~aivlvvsNPvd~ 123 (294)
T 2x0j_A 111 --ESKILVVTNPMDV 123 (294)
T ss_dssp --TCEEEECSSSHHH
T ss_pred --ceEEEEecCcchh
Confidence 5788889987754
No 143
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=97.87 E-value=1.6e-05 Score=79.85 Aligned_cols=94 Identities=21% Similarity=0.357 Sum_probs=67.2
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
.-++|+|||.|.||..+|..+... | .+|..|+|+++..+. +.
T Consensus 136 ~gktvGIiGlG~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~~--------------------------~~------ 177 (324)
T 3evt_A 136 TGQQLLIYGTGQIGQSLAAKASAL-G-----MHVIGVNTTGHPADH--------------------------FH------ 177 (324)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESSCCCCTT--------------------------CS------
T ss_pred cCCeEEEECcCHHHHHHHHHHHhC-C-----CEEEEECCCcchhHh--------------------------Hh------
Confidence 347999999999999999999877 7 899999998642210 10
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc-chHHHHH-HHHHHhhhccCCCCEEEEeecc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVF-EEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps-~~l~~vl-~~l~~~l~~~~~~~ivIs~~kG 199 (465)
......+++++++.||+|++++|. ..++.++ ++....+++ ++++|.++.|
T Consensus 178 -------------------------~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~---gailIN~aRG 229 (324)
T 3evt_A 178 -------------------------ETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQ---QPMLINIGRG 229 (324)
T ss_dssp -------------------------EEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCS---CCEEEECSCG
T ss_pred -------------------------hccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCC---CCEEEEcCCC
Confidence 011234667888999999999994 4555544 334445665 6889988877
Q ss_pred cc
Q 012349 200 VE 201 (465)
Q Consensus 200 i~ 201 (465)
=.
T Consensus 230 ~~ 231 (324)
T 3evt_A 230 PA 231 (324)
T ss_dssp GG
T ss_pred hh
Confidence 43
No 144
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.86 E-value=7.1e-05 Score=75.32 Aligned_cols=83 Identities=22% Similarity=0.165 Sum_probs=59.7
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHh-cCCCCCCeeE-EEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchh
Q 012349 40 EGDPLRIVGVGAGAWGSVFTAMLQDS-YGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYV 117 (465)
Q Consensus 40 ~~~~mkIaIIGaGamGsalA~~La~~-~G~~~~~~~V-~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~ 117 (465)
..+++||+|||+|.||..++..+.+. .+ .++ .+++++++.+++. .+. +
T Consensus 10 ~~~~~rvgiiG~G~~g~~~~~~l~~~~~~-----~~lvav~d~~~~~~~~~---------~~~-------------~--- 59 (354)
T 3q2i_A 10 TDRKIRFALVGCGRIANNHFGALEKHADR-----AELIDVCDIDPAALKAA---------VER-------------T--- 59 (354)
T ss_dssp CSSCEEEEEECCSTTHHHHHHHHHHTTTT-----EEEEEEECSSHHHHHHH---------HHH-------------H---
T ss_pred CCCcceEEEEcCcHHHHHHHHHHHhCCCC-----eEEEEEEcCCHHHHHHH---------HHH-------------c---
Confidence 34568999999999999999988865 23 564 4888887654321 000 0
Q ss_pred hhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHH
Q 012349 118 EARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (465)
Q Consensus 118 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~ 181 (465)
++.+.+|+++.+. +.|+|++|+|+....+++....
T Consensus 60 -----------------------------~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al 96 (354)
T 3q2i_A 60 -----------------------------GARGHASLTDMLAQTDADIVILTTPSGLHPTQSIECS 96 (354)
T ss_dssp -----------------------------CCEEESCHHHHHHHCCCSEEEECSCGGGHHHHHHHHH
T ss_pred -----------------------------CCceeCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHH
Confidence 2356688888776 7899999999998777766544
No 145
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=97.86 E-value=2.1e-05 Score=79.74 Aligned_cols=96 Identities=14% Similarity=0.122 Sum_probs=68.3
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 40 ~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
+...++|+|||.|.||.++|..+... | .+|..|+++.+... .. ..
T Consensus 165 ~l~g~tvGIIG~G~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~~-----------~~-------------~~----- 209 (347)
T 1mx3_A 165 RIRGETLGIIGLGRVGQAVALRAKAF-G-----FNVLFYDPYLSDGV-----------ER-------------AL----- 209 (347)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECTTSCTTH-----------HH-------------HH-----
T ss_pred CCCCCEEEEEeECHHHHHHHHHHHHC-C-----CEEEEECCCcchhh-----------Hh-------------hc-----
Confidence 44558999999999999999999876 7 89999998753210 00 00
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH-HHHHHhhhccCCCCEEEEee
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLA 197 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl-~~l~~~l~~~~~~~ivIs~~ 197 (465)
++....+++++++.+|+|++++|.. .++.++ ++..+.+++ ++++|.++
T Consensus 210 ---------------------------g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---gailIN~a 259 (347)
T 1mx3_A 210 ---------------------------GLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQ---GAFLVNTA 259 (347)
T ss_dssp ---------------------------TCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCT---TEEEEECS
T ss_pred ---------------------------CCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCC---CCEEEECC
Confidence 1223346788889999999999964 555555 344445665 67888888
Q ss_pred ccc
Q 012349 198 KGV 200 (465)
Q Consensus 198 kGi 200 (465)
.|=
T Consensus 260 rg~ 262 (347)
T 1mx3_A 260 RGG 262 (347)
T ss_dssp CTT
T ss_pred CCh
Confidence 773
No 146
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=97.85 E-value=2e-05 Score=78.93 Aligned_cols=94 Identities=18% Similarity=0.184 Sum_probs=67.4
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEec-CchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRR-PGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 41 ~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r-~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
...++|+|||.|.||.++|..+... | .+|..|+| +++.... ...
T Consensus 144 l~g~~vgIIG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~~~~---------------------------~~~-- 188 (320)
T 1gdh_A 144 LDNKTLGIYGFGSIGQALAKRAQGF-D-----MDIDYFDTHRASSSDE---------------------------ASY-- 188 (320)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSSCCCHHHH---------------------------HHH--
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEECCCCcChhhh---------------------------hhc--
Confidence 3447999999999999999999876 7 89999999 7642100 000
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH-HHHHHhhhccCCCCEEEEee
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLA 197 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl-~~l~~~l~~~~~~~ivIs~~ 197 (465)
++...+++++++..+|+|++++|.. .++.++ +...+.+++ ++++|.++
T Consensus 189 ---------------------------g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~---gailIn~a 238 (320)
T 1gdh_A 189 ---------------------------QATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQ---GAIVVNTA 238 (320)
T ss_dssp ---------------------------TCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCT---TEEEEECS
T ss_pred ---------------------------CcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCC---CcEEEECC
Confidence 1223346788889999999999964 455555 334455665 67888888
Q ss_pred cc
Q 012349 198 KG 199 (465)
Q Consensus 198 kG 199 (465)
.|
T Consensus 239 rg 240 (320)
T 1gdh_A 239 RG 240 (320)
T ss_dssp CG
T ss_pred CC
Confidence 77
No 147
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=97.83 E-value=2.3e-05 Score=78.30 Aligned_cols=93 Identities=14% Similarity=0.160 Sum_probs=65.8
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 41 ~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
...++|+|||.|.||..+|..+... | .+|..|+|+++.... .. .
T Consensus 140 l~g~~vgIIG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~~~----------~~--------------~------ 183 (313)
T 2ekl_A 140 LAGKTIGIVGFGRIGTKVGIIANAM-G-----MKVLAYDILDIREKA----------EK--------------I------ 183 (313)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHT-T-----CEEEEECSSCCHHHH----------HH--------------T------
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEECCCcchhHH----------Hh--------------c------
Confidence 3458999999999999999999877 7 899999998752110 00 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcch-HHHHH-HHHHHhhhccCCCCEEEEeec
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVF-EEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~-l~~vl-~~l~~~l~~~~~~~ivIs~~k 198 (465)
++.. .+++++++.+|+|++++|... ++.++ +...+.+++ ++++|.++-
T Consensus 184 --------------------------g~~~-~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~---ga~lIn~ar 233 (313)
T 2ekl_A 184 --------------------------NAKA-VSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKD---NVIIVNTSR 233 (313)
T ss_dssp --------------------------TCEE-CCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCT---TEEEEESSC
T ss_pred --------------------------Ccee-cCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCC---CCEEEECCC
Confidence 1222 367788899999999999643 44444 334445565 678888877
Q ss_pred c
Q 012349 199 G 199 (465)
Q Consensus 199 G 199 (465)
|
T Consensus 234 g 234 (313)
T 2ekl_A 234 A 234 (313)
T ss_dssp G
T ss_pred C
Confidence 6
No 148
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=97.83 E-value=0.00011 Score=74.29 Aligned_cols=105 Identities=17% Similarity=0.249 Sum_probs=68.4
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 43 ~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
+|||+|||+ |.+|+++|..++.. |.. ++|.++|+++++++.... | ++. ..+ +
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~-g~~---~evvLiDi~~~k~~g~a~----D-L~~-----------~~~-~------ 60 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMM-RLT---PNLCLYDPFAVGLEGVAE----E-IRH-----------CGF-E------ 60 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHT-TCC---SCEEEECSCHHHHHHHHH----H-HHH-----------HCC-T------
T ss_pred CCEEEEECCCChHHHHHHHHHHhc-CCC---CEEEEEeCCchhHHHHHH----h-hhh-----------CcC-C------
Confidence 579999998 99999999999887 631 489999998764432100 0 100 001 1
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--Cc--------------chHHHHHHHHHHhhh
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PS--------------TETKEVFEEISRYWK 185 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaV--ps--------------~~l~~vl~~l~~~l~ 185 (465)
..++.+++|..+++++||+||++. |. ..++++.+.+.++.+
T Consensus 61 -----------------------~~~i~~t~d~~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p 117 (343)
T 3fi9_A 61 -----------------------GLNLTFTSDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCP 117 (343)
T ss_dssp -----------------------TCCCEEESCHHHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred -----------------------CCceEEcCCHHHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 014677889988899999999986 22 124455555555543
Q ss_pred ccCCCCE-EEEeecccc
Q 012349 186 ERITVPV-IISLAKGVE 201 (465)
Q Consensus 186 ~~~~~~i-vIs~~kGi~ 201 (465)
+.+ ++.++|-++
T Consensus 118 ----~a~~vlvvsNPvd 130 (343)
T 3fi9_A 118 ----DCKHVIIIFNPAD 130 (343)
T ss_dssp ----TCCEEEECSSSHH
T ss_pred ----CcEEEEEecCchH
Confidence 464 777887654
No 149
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.83 E-value=3.3e-05 Score=66.33 Aligned_cols=38 Identities=16% Similarity=0.208 Sum_probs=33.1
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
+++|.|+|+|.+|..++..|.+. | ++|++++++++.++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~-g-----~~v~~~d~~~~~~~ 43 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRM-G-----HEVLAVDINEEKVN 43 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-T-----CCCEEEESCHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHH
Confidence 45799999999999999999988 7 88999999876543
No 150
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=97.81 E-value=2.5e-05 Score=80.45 Aligned_cols=97 Identities=20% Similarity=0.186 Sum_probs=68.7
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 40 ~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
+...++|+|||.|.||.++|..+... | .+|..|+|+....+. ....
T Consensus 188 ~l~gktvGIIGlG~IG~~vA~~l~a~-G-----~~V~~~d~~~~~~~~--------------------------~~~~-- 233 (393)
T 2nac_A 188 DLEAMHVGTVAAGRIGLAVLRRLAPF-D-----VHLHYTDRHRLPESV--------------------------EKEL-- 233 (393)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGG-T-----CEEEEECSSCCCHHH--------------------------HHHH--
T ss_pred cCCCCEEEEEeECHHHHHHHHHHHhC-C-----CEEEEEcCCccchhh--------------------------Hhhc--
Confidence 34457999999999999999999876 7 899999987632211 0000
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH-HHHHHhhhccCCCCEEEEee
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLA 197 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl-~~l~~~l~~~~~~~ivIs~~ 197 (465)
++....++++.++.+|+|++++|.. .++.++ ++....+++ ++++|.++
T Consensus 234 ---------------------------G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~---gailIN~a 283 (393)
T 2nac_A 234 ---------------------------NLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKR---GAYIVNTA 283 (393)
T ss_dssp ---------------------------TCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCT---TEEEEECS
T ss_pred ---------------------------CceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCC---CCEEEECC
Confidence 1233356788899999999999953 555555 344455665 68888888
Q ss_pred ccc
Q 012349 198 KGV 200 (465)
Q Consensus 198 kGi 200 (465)
.|=
T Consensus 284 RG~ 286 (393)
T 2nac_A 284 RGK 286 (393)
T ss_dssp CGG
T ss_pred Cch
Confidence 773
No 151
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.81 E-value=5.4e-05 Score=66.62 Aligned_cols=75 Identities=20% Similarity=0.236 Sum_probs=54.2
Q ss_pred CCceEEEECc----cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchh
Q 012349 42 DPLRIVGVGA----GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYV 117 (465)
Q Consensus 42 ~~mkIaIIGa----GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~ 117 (465)
.+.+|+|||+ |.||..++..|.+. | ++|+-++++.+. +.
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~-G-----~~V~~vnp~~~~-----------------------------i~-- 55 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSK-G-----FEVLPVNPNYDE-----------------------------IE-- 55 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHT-T-----CEEEEECTTCSE-----------------------------ET--
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHC-C-----CEEEEeCCCCCe-----------------------------EC--
Confidence 4579999999 99999999999888 7 664444433210 11
Q ss_pred hhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHH
Q 012349 118 EARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISR 182 (465)
Q Consensus 118 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~ 182 (465)
++.+..+++++.+.+|+++++||+....++++++..
T Consensus 56 -----------------------------G~~~~~s~~el~~~vDlvii~vp~~~v~~v~~~~~~ 91 (138)
T 1y81_A 56 -----------------------------GLKCYRSVRELPKDVDVIVFVVPPKVGLQVAKEAVE 91 (138)
T ss_dssp -----------------------------TEECBSSGGGSCTTCCEEEECSCHHHHHHHHHHHHH
T ss_pred -----------------------------CeeecCCHHHhCCCCCEEEEEeCHHHHHHHHHHHHH
Confidence 123334555655678999999999999999988765
No 152
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.81 E-value=3.8e-05 Score=74.11 Aligned_cols=126 Identities=13% Similarity=0.167 Sum_probs=77.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~-l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
||||+|+|+|.||..++..+.+. + +++. +++++.+. ..
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~-~-----~eLva~~d~~~~~----------------------------~~------- 41 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK-G-----HEIVGVIENTPKA----------------------------TT------- 41 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEECSSCC------------------------------C-------
T ss_pred ceEEEEECcCHHHHHHHHHHHhC-C-----CEEEEEEecCccc----------------------------cC-------
Confidence 58999999999999999999887 5 4433 35554320 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
++.+++|+++.+ ++|+||-++.+..+.+.++ +.. +..+|+.+.|+.
T Consensus 42 -------------------------gv~v~~dl~~l~-~~DVvIDft~p~a~~~~~~-----l~~---g~~vVigTTG~s 87 (243)
T 3qy9_A 42 -------------------------PYQQYQHIADVK-GADVAIDFSNPNLLFPLLD-----EDF---HLPLVVATTGEK 87 (243)
T ss_dssp -------------------------CSCBCSCTTTCT-TCSEEEECSCHHHHHHHHT-----SCC---CCCEEECCCSSH
T ss_pred -------------------------CCceeCCHHHHh-CCCEEEEeCChHHHHHHHH-----Hhc---CCceEeCCCCCC
Confidence 123456676666 8999996666655555544 333 455677788986
Q ss_pred ccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcC
Q 012349 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRR 266 (465)
Q Consensus 202 ~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~ 266 (465)
.+. .+.+.+... .+.++..|||..-+.-= .+.++.+++.|..
T Consensus 88 ~e~---------~~~l~~aa~----~~~v~~a~N~S~Gv~l~----------~~~~~~aa~~l~~ 129 (243)
T 3qy9_A 88 EKL---------LNKLDELSQ----NMPVFFSANMSYGVHAL----------TKILAAAVPLLDD 129 (243)
T ss_dssp HHH---------HHHHHHHTT----TSEEEECSSCCHHHHHH----------HHHHHHHHHHTTT
T ss_pred HHH---------HHHHHHHHh----cCCEEEECCccHHHHHH----------HHHHHHHHHhcCC
Confidence 541 133444332 24568899997632210 1345666677754
No 153
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=97.80 E-value=2.5e-05 Score=79.71 Aligned_cols=96 Identities=23% Similarity=0.242 Sum_probs=68.1
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhh
Q 012349 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (465)
Q Consensus 40 ~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~-V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~ 118 (465)
+...++|+|||.|.||.++|..+... | .+ |..|+|+....+. ...
T Consensus 161 ~l~g~tvgIIG~G~IG~~vA~~l~~~-G-----~~~V~~~d~~~~~~~~--------------------------~~~-- 206 (364)
T 2j6i_A 161 DIEGKTIATIGAGRIGYRVLERLVPF-N-----PKELLYYDYQALPKDA--------------------------EEK-- 206 (364)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGG-C-----CSEEEEECSSCCCHHH--------------------------HHH--
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHhC-C-----CcEEEEECCCccchhH--------------------------HHh--
Confidence 34457999999999999999999876 7 76 9999987643221 000
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH-HHHHHhhhccCCCCEEEEe
Q 012349 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISL 196 (465)
Q Consensus 119 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl-~~l~~~l~~~~~~~ivIs~ 196 (465)
.++....++++++..+|+|++++|.. .++.++ +...+.+++ ++++|.+
T Consensus 207 ---------------------------~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---ga~lIn~ 256 (364)
T 2j6i_A 207 ---------------------------VGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKK---GAWLVNT 256 (364)
T ss_dssp ---------------------------TTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCT---TEEEEEC
T ss_pred ---------------------------cCcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCC---CCEEEEC
Confidence 02233457888889999999999975 455544 334455665 6788888
Q ss_pred ecc
Q 012349 197 AKG 199 (465)
Q Consensus 197 ~kG 199 (465)
+.|
T Consensus 257 arG 259 (364)
T 2j6i_A 257 ARG 259 (364)
T ss_dssp SCG
T ss_pred CCC
Confidence 877
No 154
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=97.79 E-value=3.7e-05 Score=77.88 Aligned_cols=93 Identities=19% Similarity=0.182 Sum_probs=66.9
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
-++|+|||.|.||..+|..+... | .+|..|+|+....+. ..
T Consensus 173 gktvGIIGlG~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~~--------------------------~~------- 213 (345)
T 4g2n_A 173 GRRLGIFGMGRIGRAIATRARGF-G-----LAIHYHNRTRLSHAL--------------------------EE------- 213 (345)
T ss_dssp TCEEEEESCSHHHHHHHHHHHTT-T-----CEEEEECSSCCCHHH--------------------------HT-------
T ss_pred CCEEEEEEeChhHHHHHHHHHHC-C-----CEEEEECCCCcchhh--------------------------hc-------
Confidence 47999999999999999999866 6 899999997632110 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc-chHHHHH-HHHHHhhhccCCCCEEEEeeccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVF-EEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps-~~l~~vl-~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
......+++++++.||+|++++|. ..++.++ ++....+++ ++++|.++.|=
T Consensus 214 ------------------------g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~---gailIN~aRG~ 266 (345)
T 4g2n_A 214 ------------------------GAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPE---GAVVINISRGD 266 (345)
T ss_dssp ------------------------TCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCT---TEEEEECSCGG
T ss_pred ------------------------CCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCC---CcEEEECCCCc
Confidence 122345788889999999999994 4444444 334445565 68898888774
Q ss_pred c
Q 012349 201 E 201 (465)
Q Consensus 201 ~ 201 (465)
.
T Consensus 267 ~ 267 (345)
T 4g2n_A 267 L 267 (345)
T ss_dssp G
T ss_pred h
Confidence 3
No 155
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=97.79 E-value=1.9e-05 Score=78.67 Aligned_cols=89 Identities=18% Similarity=0.298 Sum_probs=66.0
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 41 ~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
...++|+|||.|.||..+|..+... | ++|..|+|+.+ +. +.
T Consensus 122 l~g~~vgIIG~G~IG~~~A~~l~~~-G-----~~V~~~dr~~~--~~----------------------------~~--- 162 (303)
T 1qp8_A 122 IQGEKVAVLGLGEIGTRVGKILAAL-G-----AQVRGFSRTPK--EG----------------------------PW--- 162 (303)
T ss_dssp CTTCEEEEESCSTHHHHHHHHHHHT-T-----CEEEEECSSCC--CS----------------------------SS---
T ss_pred CCCCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEECCCcc--cc----------------------------Cc---
Confidence 3458999999999999999999877 7 89999998763 10 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHHH-HHHHhhhccCCCCEEEEeec
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFE-EISRYWKERITVPVIISLAK 198 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl~-~l~~~l~~~~~~~ivIs~~k 198 (465)
....+++++++.+|+|++++|.. .++.++. +..+.+++ ++++|.++.
T Consensus 163 ----------------------------~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~---gailin~sr 211 (303)
T 1qp8_A 163 ----------------------------RFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAE---DAVFVNVGR 211 (303)
T ss_dssp ----------------------------CCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCT---TCEEEECSC
T ss_pred ----------------------------ccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCC---CCEEEECCC
Confidence 01235667889999999999976 4666653 45556666 688888887
Q ss_pred c
Q 012349 199 G 199 (465)
Q Consensus 199 G 199 (465)
|
T Consensus 212 g 212 (303)
T 1qp8_A 212 A 212 (303)
T ss_dssp G
T ss_pred C
Confidence 6
No 156
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=97.78 E-value=2.4e-05 Score=69.42 Aligned_cols=83 Identities=17% Similarity=0.026 Sum_probs=56.8
Q ss_pred HHhhhhcCCCCCCceEEEECc----cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhh-hhhhhhhhHHHHhchhhhHH
Q 012349 31 ELRRLMGKAEGDPLRIVGVGA----GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV-DRATAEHLFEVINSREDVLR 105 (465)
Q Consensus 31 ~~~~~~~~~~~~~mkIaIIGa----GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~-~~i~~~~l~~~i~~~~~~~~ 105 (465)
+++.++.. +.+|+|||+ |.||..++..|.+. | ++|+.++++. . ++
T Consensus 5 ~l~~ll~~----p~~IavIGas~~~g~~G~~~~~~L~~~-G-----~~v~~vnp~~--~g~~------------------ 54 (145)
T 2duw_A 5 DIAGILTS----TRTIALVGASDKPDRPSYRVMKYLLDQ-G-----YHVIPVSPKV--AGKT------------------ 54 (145)
T ss_dssp SHHHHHHH----CCCEEEESCCSCTTSHHHHHHHHHHHH-T-----CCEEEECSSS--TTSE------------------
T ss_pred HHHHHHhC----CCEEEEECcCCCCCChHHHHHHHHHHC-C-----CEEEEeCCcc--cccc------------------
Confidence 35555621 468999999 89999999999988 7 6654444432 1 10
Q ss_pred hhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHH
Q 012349 106 RLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISR 182 (465)
Q Consensus 106 ~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~ 182 (465)
+. ++.+..++++....+|+++++||+....++++++..
T Consensus 55 --------i~-------------------------------G~~~~~sl~el~~~~Dlvii~vp~~~v~~v~~~~~~ 92 (145)
T 2duw_A 55 --------LL-------------------------------GQQGYATLADVPEKVDMVDVFRNSEAAWGVAQEAIA 92 (145)
T ss_dssp --------ET-------------------------------TEECCSSTTTCSSCCSEEECCSCSTHHHHHHHHHHH
T ss_pred --------cC-------------------------------CeeccCCHHHcCCCCCEEEEEeCHHHHHHHHHHHHH
Confidence 11 122333444545578999999999999999988766
No 157
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.77 E-value=6.3e-05 Score=71.30 Aligned_cols=96 Identities=14% Similarity=0.296 Sum_probs=62.6
Q ss_pred hHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHH--HHHhcCCCCCCe-eEEEEecCchhhhhhhhhhhHHHHhchh
Q 012349 25 LEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAM--LQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSRE 101 (465)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~--La~~~G~~~~~~-~V~l~~r~~~~~~~i~~~~l~~~i~~~~ 101 (465)
.++-++++++.++.. ..++|+|||+|++|.+++.. +... | . -|-++|.+++.+.+
T Consensus 69 v~~L~~~~~~~lg~~--~~~rV~IIGAG~~G~~La~~~~~~~~-g-----~~iVg~~D~dp~k~g~-------------- 126 (215)
T 2vt3_A 69 VDYLLSFFRKTLDQD--EMTDVILIGVGNLGTAFLHYNFTKNN-N-----TKISMAFDINESKIGT-------------- 126 (215)
T ss_dssp HHHHHHHHHHHHHHC-----CEEEECCSHHHHHHHHCC------------CCEEEEEESCTTTTTC--------------
T ss_pred hHHHHHHHHHHhCcC--CCCEEEEEccCHHHHHHHHHHhcccC-C-----cEEEEEEeCCHHHHHh--------------
Confidence 345566677777664 34789999999999999994 3233 4 4 35678888753321
Q ss_pred hhHHhhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHH
Q 012349 102 DVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEIS 181 (465)
Q Consensus 102 ~~~~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~ 181 (465)
...++ ++...+++++.+++.|++++|+|+....++++.+.
T Consensus 127 -----------~i~gv-----------------------------~V~~~~dl~eli~~~D~ViIAvPs~~~~ei~~~l~ 166 (215)
T 2vt3_A 127 -----------EVGGV-----------------------------PVYNLDDLEQHVKDESVAILTVPAVAAQSITDRLV 166 (215)
T ss_dssp -----------EETTE-----------------------------EEEEGGGHHHHCSSCCEEEECSCHHHHHHHHHHHH
T ss_pred -----------HhcCC-----------------------------eeechhhHHHHHHhCCEEEEecCchhHHHHHHHHH
Confidence 11111 23345778887766699999999988888888775
Q ss_pred H
Q 012349 182 R 182 (465)
Q Consensus 182 ~ 182 (465)
.
T Consensus 167 ~ 167 (215)
T 2vt3_A 167 A 167 (215)
T ss_dssp H
T ss_pred H
Confidence 4
No 158
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=97.77 E-value=3.9e-05 Score=76.39 Aligned_cols=93 Identities=20% Similarity=0.288 Sum_probs=66.1
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 41 ~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
...++|+|||.|.||..+|..+... | .+|..|+|+++. +. ... .
T Consensus 140 l~g~~vgIiG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~-~~---------~~~--------------~------ 183 (307)
T 1wwk_A 140 LEGKTIGIIGFGRIGYQVAKIANAL-G-----MNILLYDPYPNE-ER---------AKE--------------V------ 183 (307)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCH-HH---------HHH--------------T------
T ss_pred cCCceEEEEccCHHHHHHHHHHHHC-C-----CEEEEECCCCCh-hh---------Hhh--------------c------
Confidence 3447999999999999999999877 7 899999998752 11 000 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcch-HHHHH-HHHHHhhhccCCCCEEEEeec
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVF-EEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~-l~~vl-~~l~~~l~~~~~~~ivIs~~k 198 (465)
++.. .+++++++.+|+|++++|... ++.++ ++..+.+++ ++++|.++-
T Consensus 184 --------------------------g~~~-~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~---ga~lin~ar 233 (307)
T 1wwk_A 184 --------------------------NGKF-VDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKK---TAILINTSR 233 (307)
T ss_dssp --------------------------TCEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCT---TCEEEECSC
T ss_pred --------------------------Cccc-cCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCC---CeEEEECCC
Confidence 1222 367788889999999999643 44444 334445665 688888877
Q ss_pred c
Q 012349 199 G 199 (465)
Q Consensus 199 G 199 (465)
|
T Consensus 234 g 234 (307)
T 1wwk_A 234 G 234 (307)
T ss_dssp G
T ss_pred C
Confidence 6
No 159
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=97.75 E-value=3.4e-05 Score=78.37 Aligned_cols=95 Identities=14% Similarity=0.180 Sum_probs=67.4
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
.-++|+|||.|.||..+|..+... | .+|..|+|+... +. ...
T Consensus 159 ~g~tvGIIGlG~IG~~vA~~l~~~-G-----~~V~~~d~~~~~-~~--------------------------~~~----- 200 (352)
T 3gg9_A 159 KGQTLGIFGYGKIGQLVAGYGRAF-G-----MNVLVWGRENSK-ER--------------------------ARA----- 200 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSHHHH-HH--------------------------HHH-----
T ss_pred CCCEEEEEeECHHHHHHHHHHHhC-C-----CEEEEECCCCCH-HH--------------------------HHh-----
Confidence 347999999999999999999877 7 899999987421 10 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH-HHHHHhhhccCCCCEEEEeecc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl-~~l~~~l~~~~~~~ivIs~~kG 199 (465)
.++....+++++++.+|+|++++|.. .++.++ ++..+.+++ ++++|.++.|
T Consensus 201 ------------------------~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~---gailIN~aRg 253 (352)
T 3gg9_A 201 ------------------------DGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKP---TALFVNTSRA 253 (352)
T ss_dssp ------------------------TTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCT---TCEEEECSCG
T ss_pred ------------------------cCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCC---CcEEEECCCc
Confidence 02334467888899999999999943 444443 234445565 6889988877
Q ss_pred cc
Q 012349 200 VE 201 (465)
Q Consensus 200 i~ 201 (465)
=.
T Consensus 254 ~~ 255 (352)
T 3gg9_A 254 EL 255 (352)
T ss_dssp GG
T ss_pred hh
Confidence 43
No 160
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.74 E-value=0.00013 Score=69.24 Aligned_cols=81 Identities=23% Similarity=0.358 Sum_probs=58.6
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V-~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
|||+|||+|.||..++..|.+. | ++| .+|++++. .+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~-g-----~~lv~v~d~~~~-~~------------------------------------ 37 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERN-G-----FEIAAILDVRGE-HE------------------------------------ 37 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEECSSCC-CT------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHhcC-C-----CEEEEEEecCcc-hh------------------------------------
Confidence 6999999999999999999866 6 776 68887741 10
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHh-cCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV-WDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal-~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kG 199 (465)
. ..+|+++.+ .++|+|++|+|++...+++... +.. +..+++...+
T Consensus 38 ------------------------~--~~~~~~~l~~~~~DvVv~~~~~~~~~~~~~~~---l~~---G~~vv~~~~~ 83 (236)
T 2dc1_A 38 ------------------------K--MVRGIDEFLQREMDVAVEAASQQAVKDYAEKI---LKA---GIDLIVLSTG 83 (236)
T ss_dssp ------------------------T--EESSHHHHTTSCCSEEEECSCHHHHHHHHHHH---HHT---TCEEEESCGG
T ss_pred ------------------------h--hcCCHHHHhcCCCCEEEECCCHHHHHHHHHHH---HHC---CCcEEEECcc
Confidence 1 235666766 6899999999988777766543 344 4566666544
No 161
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.74 E-value=0.00012 Score=73.35 Aligned_cols=82 Identities=21% Similarity=0.198 Sum_probs=59.4
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~-l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
+++||+|||+|.||..++..|.+. . +.++. +++++++.++.. .. .+
T Consensus 3 ~~~rvgiiG~G~~g~~~~~~l~~~-~----~~~l~av~d~~~~~~~~~---------a~-------------~~------ 49 (344)
T 3euw_A 3 LTLRIALFGAGRIGHVHAANIAAN-P----DLELVVIADPFIEGAQRL---------AE-------------AN------ 49 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHC-T----TEEEEEEECSSHHHHHHH---------HH-------------TT------
T ss_pred CceEEEEECCcHHHHHHHHHHHhC-C----CcEEEEEECCCHHHHHHH---------HH-------------Hc------
Confidence 358999999999999999998875 2 25655 788887644320 00 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHH
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISR 182 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~ 182 (465)
+....+|+++.+. ++|+|++|+|+....+++.....
T Consensus 50 --------------------------g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~ 87 (344)
T 3euw_A 50 --------------------------GAEAVASPDEVFARDDIDGIVIGSPTSTHVDLITRAVE 87 (344)
T ss_dssp --------------------------TCEEESSHHHHTTCSCCCEEEECSCGGGHHHHHHHHHH
T ss_pred --------------------------CCceeCCHHHHhcCCCCCEEEEeCCchhhHHHHHHHHH
Confidence 2345688888887 78999999999988777766543
No 162
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=97.72 E-value=4.6e-05 Score=78.80 Aligned_cols=93 Identities=17% Similarity=0.265 Sum_probs=67.7
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 40 ~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
+..-++|+|||.|.||..+|..+... | .+|..|+|+.... ..
T Consensus 142 el~gktlGiIGlG~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~----------------------------~~---- 183 (404)
T 1sc6_A 142 EARGKKLGIIGYGHIGTQLGILAESL-G-----MYVYFYDIENKLP----------------------------LG---- 183 (404)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCCC----------------------------CT----
T ss_pred ccCCCEEEEEeECHHHHHHHHHHHHC-C-----CEEEEEcCCchhc----------------------------cC----
Confidence 34457999999999999999999876 7 8999999865210 00
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH-HHHHHhhhccCCCCEEEEee
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLA 197 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl-~~l~~~l~~~~~~~ivIs~~ 197 (465)
.+....+++++++.||+|++++|.. .++.++ ++....+++ ++++|.++
T Consensus 184 ---------------------------~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---ga~lIN~a 233 (404)
T 1sc6_A 184 ---------------------------NATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKP---GSLLINAS 233 (404)
T ss_dssp ---------------------------TCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCT---TEEEEECS
T ss_pred ---------------------------CceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCC---CeEEEECC
Confidence 1233457888899999999999965 455554 334445665 68888888
Q ss_pred ccc
Q 012349 198 KGV 200 (465)
Q Consensus 198 kGi 200 (465)
.|=
T Consensus 234 Rg~ 236 (404)
T 1sc6_A 234 RGT 236 (404)
T ss_dssp CSS
T ss_pred CCh
Confidence 773
No 163
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=97.71 E-value=2e-05 Score=79.21 Aligned_cols=94 Identities=18% Similarity=0.288 Sum_probs=66.5
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
-++|+|||.|.||..+|..+... | .+|..|+|++...+. ..
T Consensus 140 g~tvGIIGlG~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~~--------------------------~~------- 180 (324)
T 3hg7_A 140 GRTLLILGTGSIGQHIAHTGKHF-G-----MKVLGVSRSGRERAG--------------------------FD------- 180 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCCCTT--------------------------CS-------
T ss_pred cceEEEEEECHHHHHHHHHHHhC-C-----CEEEEEcCChHHhhh--------------------------hh-------
Confidence 47999999999999999999877 7 899999987632110 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc-chHHHHH-HHHHHhhhccCCCCEEEEeeccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVF-EEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps-~~l~~vl-~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
......+++++++.||+|++++|. ..++.++ ++....+++ ++++|.++.|=
T Consensus 181 ------------------------~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~---gailIN~aRG~ 233 (324)
T 3hg7_A 181 ------------------------QVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKP---GAILFNVGRGN 233 (324)
T ss_dssp ------------------------EEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCT---TCEEEECSCGG
T ss_pred ------------------------cccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCC---CcEEEECCCch
Confidence 011135678889999999999994 3445444 223334555 68999988874
Q ss_pred cc
Q 012349 201 EA 202 (465)
Q Consensus 201 ~~ 202 (465)
..
T Consensus 234 ~v 235 (324)
T 3hg7_A 234 AI 235 (324)
T ss_dssp GB
T ss_pred hh
Confidence 33
No 164
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.70 E-value=0.00018 Score=71.59 Aligned_cols=79 Identities=16% Similarity=0.228 Sum_probs=57.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~-l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
++||+|||+|.||..++..|.+..+ .++. +++++++.++++ .+. +
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~-----~~l~av~d~~~~~~~~~---------~~~------------~-------- 48 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNAD-----ARLVAVADAFPAAAEAI---------AGA------------Y-------- 48 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTT-----EEEEEEECSSHHHHHHH---------HHH------------T--------
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCC-----cEEEEEECCCHHHHHHH---------HHH------------h--------
Confidence 5799999999999999999987523 5655 788887644321 000 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHH
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~ 181 (465)
++. .+|+++.+. +.|+|++|+|+....+++....
T Consensus 49 -------------------------~~~-~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al 84 (331)
T 4hkt_A 49 -------------------------GCE-VRTIDAIEAAADIDAVVICTPTDTHADLIERFA 84 (331)
T ss_dssp -------------------------TCE-ECCHHHHHHCTTCCEEEECSCGGGHHHHHHHHH
T ss_pred -------------------------CCC-cCCHHHHhcCCCCCEEEEeCCchhHHHHHHHHH
Confidence 233 577888776 7899999999988877776654
No 165
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=97.68 E-value=5.6e-05 Score=78.37 Aligned_cols=93 Identities=23% Similarity=0.299 Sum_probs=65.2
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
.-++|+|||.|.||..+|..+... | .+|..|++++... ..
T Consensus 155 ~gktvGIIGlG~IG~~vA~~l~~~-G-----~~V~~yd~~~~~~----------------------------~~------ 194 (416)
T 3k5p_A 155 RGKTLGIVGYGNIGSQVGNLAESL-G-----MTVRYYDTSDKLQ----------------------------YG------ 194 (416)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECTTCCCC----------------------------BT------
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEECCcchhc----------------------------cc------
Confidence 347999999999999999998876 7 8999999875210 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH-HHHHHhhhccCCCCEEEEeecc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl-~~l~~~l~~~~~~~ivIs~~kG 199 (465)
......+++++++.||+|++++|.. .++.++ ++....+++ ++++|.++-|
T Consensus 195 -------------------------~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~---gailIN~aRG 246 (416)
T 3k5p_A 195 -------------------------NVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKK---GAFLINNARG 246 (416)
T ss_dssp -------------------------TBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCT---TEEEEECSCT
T ss_pred -------------------------CcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCC---CcEEEECCCC
Confidence 1223467888899999999999963 454444 233344565 6889988877
Q ss_pred ccc
Q 012349 200 VEA 202 (465)
Q Consensus 200 i~~ 202 (465)
=..
T Consensus 247 ~vv 249 (416)
T 3k5p_A 247 SDV 249 (416)
T ss_dssp TSB
T ss_pred hhh
Confidence 433
No 166
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.67 E-value=0.00028 Score=70.00 Aligned_cols=81 Identities=17% Similarity=0.205 Sum_probs=57.4
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V-~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
|+||+|||+|.||..++..+.+. + +.++ .+++++++..+. ..+ .+.
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~-~----~~~~~~v~d~~~~~~~~---------~~~-------------~~~------ 47 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTS-G----EYQLVAIYSRKLETAAT---------FAS-------------RYQ------ 47 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-T----SEEEEEEECSSHHHHHH---------HGG-------------GSS------
T ss_pred CeEEEEEeCCHHHHHHHHHHHhC-C----CeEEEEEEeCCHHHHHH---------HHH-------------HcC------
Confidence 47999999999999999999875 3 2554 588888754332 000 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHh-cCCCEEEEecCcchHHHHHHHHH
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV-WDADIVINGLPSTETKEVFEEIS 181 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal-~~aDiVIlaVps~~l~~vl~~l~ 181 (465)
...+.+|.++.+ .++|+|++|+|+....+++....
T Consensus 48 -------------------------~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~~al 83 (325)
T 2ho3_A 48 -------------------------NIQLFDQLEVFFKSSFDLVYIASPNSLHFAQAKAAL 83 (325)
T ss_dssp -------------------------SCEEESCHHHHHTSSCSEEEECSCGGGHHHHHHHHH
T ss_pred -------------------------CCeEeCCHHHHhCCCCCEEEEeCChHHHHHHHHHHH
Confidence 124567888888 68999999999998877776543
No 167
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.67 E-value=0.00012 Score=72.15 Aligned_cols=94 Identities=9% Similarity=0.094 Sum_probs=63.1
Q ss_pred CceEEEECccHHHHH-HHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 43 PLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 43 ~mkIaIIGaGamGsa-lA~~La~~~G~~~~~~~V~-l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
++||+|||+|.||.. ++..|.+..+ .++. +++++++.+++. .+. .
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~-----~~l~av~d~~~~~~~~~---------a~~-------------~------ 52 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSER-----FEFVGAFTPNKVKREKI---------CSD-------------Y------ 52 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSS-----SEEEEEECSCHHHHHHH---------HHH-------------H------
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCC-----eEEEEEECCCHHHHHHH---------HHH-------------c------
Confidence 479999999999996 8887876412 4555 889987654431 100 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
++...+|+++.+.+.|+|++|+|+....+++..... . +..| .+-|-+
T Consensus 53 --------------------------~~~~~~~~~~ll~~~D~V~i~tp~~~h~~~~~~al~---~---gk~v-l~EKP~ 99 (308)
T 3uuw_A 53 --------------------------RIMPFDSIESLAKKCDCIFLHSSTETHYEIIKILLN---L---GVHV-YVDKPL 99 (308)
T ss_dssp --------------------------TCCBCSCHHHHHTTCSEEEECCCGGGHHHHHHHHHH---T---TCEE-EECSSS
T ss_pred --------------------------CCCCcCCHHHHHhcCCEEEEeCCcHhHHHHHHHHHH---C---CCcE-EEcCCC
Confidence 111257788888899999999999988877766543 3 3333 466655
Q ss_pred cc
Q 012349 201 EA 202 (465)
Q Consensus 201 ~~ 202 (465)
..
T Consensus 100 ~~ 101 (308)
T 3uuw_A 100 AS 101 (308)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 168
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.65 E-value=0.00018 Score=72.00 Aligned_cols=95 Identities=16% Similarity=0.157 Sum_probs=63.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~-l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
++||+|||+|.||..++..|.+..+ .++. +++++++.+++. .+. ..
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~~-----~~l~av~d~~~~~~~~~--------~~~--------------~~------ 48 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMIDD-----AILYAISDVREDRLREM--------KEK--------------LG------ 48 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGSTT-----EEEEEEECSCHHHHHHH--------HHH--------------HT------
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCCC-----cEEEEEECCCHHHHHHH--------HHH--------------hC------
Confidence 4799999999999999998876412 5554 788887644321 000 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kG 199 (465)
-..+.+|+++.+. ++|+|++|+|+....+++..... . +..|+ +-|-
T Consensus 49 -------------------------~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~---~---gk~v~-~EKP 96 (344)
T 3ezy_A 49 -------------------------VEKAYKDPHELIEDPNVDAVLVCSSTNTHSELVIACAK---A---KKHVF-CEKP 96 (344)
T ss_dssp -------------------------CSEEESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHH---T---TCEEE-EESC
T ss_pred -------------------------CCceeCCHHHHhcCCCCCEEEEcCCCcchHHHHHHHHh---c---CCeEE-EECC
Confidence 0135678888777 78999999999987777665543 2 33343 6665
Q ss_pred ccc
Q 012349 200 VEA 202 (465)
Q Consensus 200 i~~ 202 (465)
+..
T Consensus 97 ~~~ 99 (344)
T 3ezy_A 97 LSL 99 (344)
T ss_dssp SCS
T ss_pred CCC
Confidence 443
No 169
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=97.65 E-value=3.9e-05 Score=76.59 Aligned_cols=87 Identities=23% Similarity=0.274 Sum_probs=64.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
..++|+|||.|.||..+|..+... | .+|..|+|+.+..+
T Consensus 143 ~g~~vgIIG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~~----------------------------------- 181 (311)
T 2cuk_A 143 QGLTLGLVGMGRIGQAVAKRALAF-G-----MRVVYHARTPKPLP----------------------------------- 181 (311)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCSSS-----------------------------------
T ss_pred CCCEEEEEEECHHHHHHHHHHHHC-C-----CEEEEECCCCcccc-----------------------------------
Confidence 447999999999999999999877 7 89999998763100
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHHH-HHHHhhhccCCCCEEEEeecc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFE-EISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl~-~l~~~l~~~~~~~ivIs~~kG 199 (465)
+. ..+++++++.+|+|++++|.. .++.++. +....+++ ++++|.++.|
T Consensus 182 --------------------------~~-~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~---ga~lin~srg 231 (311)
T 2cuk_A 182 --------------------------YP-FLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKR---GAILLNTARG 231 (311)
T ss_dssp --------------------------SC-BCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCT---TCEEEECSCG
T ss_pred --------------------------cc-cCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCC---CcEEEECCCC
Confidence 00 135667788999999999976 4665553 34445665 6888888876
No 170
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.65 E-value=0.00021 Score=70.54 Aligned_cols=164 Identities=16% Similarity=0.138 Sum_probs=89.4
Q ss_pred EeecchhHHHhHHHhhhhcCCCCCCceEEEEC-ccHHHHHHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhhHHH
Q 012349 19 HHTNGSLEERLDELRRLMGKAEGDPLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEV 96 (465)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIG-aGamGsalA~~La~~~G~~~~~~~-V~l~~r~~~~~~~i~~~~l~~~ 96 (465)
||.-|.||.. +.| . +++||+|+| +|.||..++..+.+..+ .+ |-+++++.....-
T Consensus 6 ~~~~~~~~~~-----~~m--~--~~irV~V~Ga~GrMGr~i~~~v~~~~~-----~eLvg~vd~~~~~~~G--------- 62 (288)
T 3ijp_A 6 HHHMGTLEAQ-----TQG--P--GSMRLTVVGANGRMGRELITAIQRRKD-----VELCAVLVRKGSSFVD--------- 62 (288)
T ss_dssp ------------------------CEEEEESSTTSHHHHHHHHHHHTCSS-----EEEEEEBCCTTCTTTT---------
T ss_pred ccccchhhhh-----hhc--c--CCeEEEEECCCCHHHHHHHHHHHhCCC-----CEEEEEEecCCccccc---------
Confidence 5667887753 222 2 568999999 89999999999876522 44 4455665321000
Q ss_pred HhchhhhHHhhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHH
Q 012349 97 INSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEV 176 (465)
Q Consensus 97 i~~~~~~~~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~v 176 (465)
. ..-.+.++ + ..++.+++|+++++.++|+||-++++....+.
T Consensus 63 --~----------d~gel~G~----~----------------------~~gv~v~~dl~~ll~~aDVvIDFT~p~a~~~~ 104 (288)
T 3ijp_A 63 --K----------DASILIGS----D----------------------FLGVRITDDPESAFSNTEGILDFSQPQASVLY 104 (288)
T ss_dssp --S----------BGGGGTTC----S----------------------CCSCBCBSCHHHHTTSCSEEEECSCHHHHHHH
T ss_pred --c----------chHHhhcc----C----------------------cCCceeeCCHHHHhcCCCEEEEcCCHHHHHHH
Confidence 0 00001110 0 01456788999988999999999987776655
Q ss_pred HHHHHHhhhccCCCCEEEEeeccccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhH
Q 012349 177 FEEISRYWKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKW 256 (465)
Q Consensus 177 l~~l~~~l~~~~~~~ivIs~~kGi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~ 256 (465)
+.... .. +..+|+.+.|+..+. -+.|.+... .+.++..|||..-+.-= .+.
T Consensus 105 ~~~~l---~~---Gv~vViGTTG~~~e~---------~~~L~~aa~----~~~~~~a~N~SiGv~ll----------~~l 155 (288)
T 3ijp_A 105 ANYAA---QK---SLIHIIGTTGFSKTE---------EAQIADFAK----YTTIVKSGNMSLGVNLL----------ANL 155 (288)
T ss_dssp HHHHH---HH---TCEEEECCCCCCHHH---------HHHHHHHHT----TSEEEECSCCCHHHHHH----------HHH
T ss_pred HHHHH---Hc---CCCEEEECCCCCHHH---------HHHHHHHhC----cCCEEEECCCcHHHHHH----------HHH
Confidence 55543 33 456777777886541 133555442 24578899997633210 134
Q ss_pred HHHHHHHHcCCCCeEEe
Q 012349 257 RKPLAKFLRRPHFTVWD 273 (465)
Q Consensus 257 ~~~l~~ll~~~g~~v~~ 273 (465)
++...+.|. .++.+.+
T Consensus 156 ~~~aa~~l~-~~~dieI 171 (288)
T 3ijp_A 156 VKRAAKALD-DDFDIEI 171 (288)
T ss_dssp HHHHHHHSC-TTSEEEE
T ss_pred HHHHHHhcC-CCCCEEE
Confidence 566677775 3555554
No 171
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.64 E-value=0.00025 Score=74.81 Aligned_cols=81 Identities=19% Similarity=0.241 Sum_probs=49.4
Q ss_pred ceEEEECccHHHHHH--HHHHHHhcCCCC-CCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 44 LRIVGVGAGAWGSVF--TAMLQDSYGYLR-DKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 44 mkIaIIGaGamGsal--A~~La~~~G~~~-~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
|||+|||+|+.|.+. ...++.. ..+. ...+|.|+|.++++++.... ..+.- .+..
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~-~~l~~~~~ei~L~Di~~~rl~~~~~-----~~~~~-------------~~~~--- 58 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQT-DELSREDTHIYLMDVHERRLNASYI-----LARKY-------------VEEL--- 58 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTC-TTTCSTTCEEEEECSCHHHHHHHHH-----HHHHH-------------HHHH---
T ss_pred CEEEEECCCchhhHHHHHHHHHhh-HhcCCCCCEEEEECCCHHHHHHHHH-----HHHHH-------------HHHc---
Confidence 799999999987553 2334433 2221 11479999999876553110 01110 0100
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL 168 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaV 168 (465)
+. . ..+..|+|.++|+++||+||+++
T Consensus 59 -~~-~--------------------~~i~~t~d~~eAl~gAD~Vi~~~ 84 (477)
T 3u95_A 59 -NS-P--------------------VKVVKTESLDEAIEGADFIINTA 84 (477)
T ss_dssp -TC-C--------------------CEEEEESCHHHHHTTCSEEEECC
T ss_pred -CC-C--------------------eEEEEeCCHHHHhCCCCEEEECc
Confidence 00 0 14778999999999999999986
No 172
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=97.64 E-value=9.5e-05 Score=71.45 Aligned_cols=64 Identities=20% Similarity=0.302 Sum_probs=43.6
Q ss_pred CCCeeEeecchhHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
..|-...+|-...--+.-|++. +. +... +|+|||+|.||.+++..|.+. | .+|++|+|+.+.++
T Consensus 90 ~~g~~~g~ntd~~g~~~~l~~~-~~-~l~~-~v~iiG~G~~g~~~a~~l~~~-g-----~~v~v~~r~~~~~~ 153 (263)
T 2d5c_A 90 VEGRLFGFNTDAPGFLEALKAG-GI-PLKG-PALVLGAGGAGRAVAFALREA-G-----LEVWVWNRTPQRAL 153 (263)
T ss_dssp ETTEEEEECCHHHHHHHHHHHT-TC-CCCS-CEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSHHHHH
T ss_pred cCCeEEEeCCCHHHHHHHHHHh-CC-CCCC-eEEEECCcHHHHHHHHHHHHC-C-----CEEEEEECCHHHHH
Confidence 3455555565443333334332 21 2234 899999999999999999988 7 68999999876443
No 173
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.64 E-value=0.00014 Score=65.85 Aligned_cols=40 Identities=15% Similarity=0.171 Sum_probs=33.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (465)
.++|.|+|+|.+|..+|..|.+..| ++|++++++++.++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g-----~~V~vid~~~~~~~~ 78 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG-----KISLGIEIREEAAQQ 78 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC-----SCEEEEESCHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC-----CeEEEEECCHHHHHH
Confidence 4689999999999999999976414 899999999875543
No 174
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.63 E-value=0.00026 Score=70.90 Aligned_cols=96 Identities=19% Similarity=0.156 Sum_probs=63.7
Q ss_pred CceEEEECccHHHHHHHHHHH-HhcCCCCCCeeEE-EEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQ-DSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La-~~~G~~~~~~~V~-l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
++||+|||+|.||..++..+. +..+ .++. +++++++.+++. .+. +
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~-----~~l~av~d~~~~~~~~~---------~~~------------~------- 48 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSG-----AEIVAVTDVNQEAAQKV---------VEQ------------Y------- 48 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSS-----EEEEEEECSSHHHHHHH---------HHH------------T-------
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCC-----cEEEEEEcCCHHHHHHH---------HHH------------h-------
Confidence 479999999999999999998 4312 5544 788887644321 000 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC--CCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeec
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~--aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~k 198 (465)
+ + ...+.+|+++.+.+ .|+|++|+|+....+++.... .. +..| .+-|
T Consensus 49 -g---~--------------------~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al---~~---Gk~v-l~EK 97 (344)
T 3mz0_A 49 -Q---L--------------------NATVYPNDDSLLADENVDAVLVTSWGPAHESSVLKAI---KA---QKYV-FCEK 97 (344)
T ss_dssp -T---C--------------------CCEEESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHH---HT---TCEE-EECS
T ss_pred -C---C--------------------CCeeeCCHHHHhcCCCCCEEEECCCchhHHHHHHHHH---HC---CCcE-EEcC
Confidence 0 0 13467888888765 899999999998877776554 33 3333 3566
Q ss_pred cccc
Q 012349 199 GVEA 202 (465)
Q Consensus 199 Gi~~ 202 (465)
-+..
T Consensus 98 P~a~ 101 (344)
T 3mz0_A 98 PLAT 101 (344)
T ss_dssp CSCS
T ss_pred CCCC
Confidence 5543
No 175
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=97.60 E-value=0.00011 Score=74.16 Aligned_cols=93 Identities=14% Similarity=0.053 Sum_probs=66.7
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 41 ~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
...++|+|||.|.||..+|..+... | .+|..|+|+.... . ....
T Consensus 163 l~g~tvgIIGlG~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~-~--------------------------~~~~--- 206 (335)
T 2g76_A 163 LNGKTLGILGLGRIGREVATRMQSF-G-----MKTIGYDPIISPE-V--------------------------SASF--- 206 (335)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSSSCHH-H--------------------------HHHT---
T ss_pred CCcCEEEEEeECHHHHHHHHHHHHC-C-----CEEEEECCCcchh-h--------------------------hhhc---
Confidence 3457999999999999999999866 6 8999999876421 0 0000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH-HHHHHhhhccCCCCEEEEeec
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl-~~l~~~l~~~~~~~ivIs~~k 198 (465)
.+.. .+++++++.+|+|++++|.. .++.++ ++..+.+++ ++++|.++-
T Consensus 207 --------------------------g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---gailIN~ar 256 (335)
T 2g76_A 207 --------------------------GVQQ-LPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKK---GVRVVNCAR 256 (335)
T ss_dssp --------------------------TCEE-CCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCT---TEEEEECSC
T ss_pred --------------------------Ccee-CCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCC---CcEEEECCC
Confidence 1222 36788899999999999975 455555 345555665 678888776
Q ss_pred c
Q 012349 199 G 199 (465)
Q Consensus 199 G 199 (465)
|
T Consensus 257 g 257 (335)
T 2g76_A 257 G 257 (335)
T ss_dssp T
T ss_pred c
Confidence 6
No 176
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.60 E-value=0.00012 Score=72.96 Aligned_cols=81 Identities=15% Similarity=0.086 Sum_probs=57.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~-l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
+++||+|||+|.||..++..|.+. . +.+|. +++++++.+++. .+. +
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~-~----~~~l~av~d~~~~~~~~~--------~~~-------------~------- 50 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRES-A----QAEVRGIASRRLENAQKM--------AKE-------------L------- 50 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHS-S----SEEEEEEBCSSSHHHHHH--------HHH-------------T-------
T ss_pred CeEEEEEECchHHHHHHHHHHHhC-C----CcEEEEEEeCCHHHHHHH--------HHH-------------c-------
Confidence 458999999999999999999875 2 25655 788887654321 000 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCe-EEecCHHHHhc--CCCEEEEecCcchHHHHHHHHH
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~ 181 (465)
++ .+.+|+++.+. ++|+|++|+|+....+++....
T Consensus 51 --------------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al 88 (330)
T 3e9m_A 51 --------------------------AIPVAYGSYEELCKDETIDIIYIPTYNQGHYSAAKLAL 88 (330)
T ss_dssp --------------------------TCCCCBSSHHHHHHCTTCSEEEECCCGGGHHHHHHHHH
T ss_pred --------------------------CCCceeCCHHHHhcCCCCCEEEEcCCCHHHHHHHHHHH
Confidence 11 23577888776 7899999999998877766544
No 177
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=97.59 E-value=9.3e-05 Score=74.92 Aligned_cols=91 Identities=21% Similarity=0.273 Sum_probs=64.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
-++|+|||.|.||..+|..+... | .+|..|+|+.+. . ...
T Consensus 148 gktvgIiGlG~IG~~vA~~l~~~-G-----~~V~~~d~~~~~-~---------------------------~~~------ 187 (343)
T 2yq5_A 148 NLTVGLIGVGHIGSAVAEIFSAM-G-----AKVIAYDVAYNP-E---------------------------FEP------ 187 (343)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCG-G---------------------------GTT------
T ss_pred CCeEEEEecCHHHHHHHHHHhhC-C-----CEEEEECCChhh-h---------------------------hhc------
Confidence 37999999999999999999876 7 899999998641 0 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc-chHHHHH-HHHHHhhhccCCCCEEEEeeccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVF-EEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps-~~l~~vl-~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
.... .+++++++.||+|++++|. ..++.++ ++....+++ ++++|.++-|=
T Consensus 188 ------------------------~~~~-~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~---gailIN~aRg~ 239 (343)
T 2yq5_A 188 ------------------------FLTY-TDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKK---SAYLINCARGE 239 (343)
T ss_dssp ------------------------TCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCT---TCEEEECSCGG
T ss_pred ------------------------cccc-cCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCC---CcEEEECCCCh
Confidence 1122 3788889999999999995 2333333 233344565 68899888774
Q ss_pred c
Q 012349 201 E 201 (465)
Q Consensus 201 ~ 201 (465)
.
T Consensus 240 ~ 240 (343)
T 2yq5_A 240 L 240 (343)
T ss_dssp G
T ss_pred h
Confidence 3
No 178
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=97.58 E-value=6.2e-05 Score=75.82 Aligned_cols=90 Identities=19% Similarity=0.262 Sum_probs=63.9
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
.++|+|||.|.||.++|..+... | .+|..|+|+.+.. ... .
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~-----------~~~-------------~--------- 186 (333)
T 1j4a_A 146 DQVVGVVGTGHIGQVFMQIMEGF-G-----AKVITYDIFRNPE-----------LEK-------------K--------- 186 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCHH-----------HHH-------------T---------
T ss_pred CCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEECCCcchh-----------HHh-------------h---------
Confidence 37999999999999999999877 7 8999999986421 000 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH-HHHHHhhhccCCCCEEEEeecc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl-~~l~~~l~~~~~~~ivIs~~kG 199 (465)
+....++++++..+|+|++++|.. .++.++ +.....+++ ++++|.++-|
T Consensus 187 -------------------------~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~---ga~lIn~arg 237 (333)
T 1j4a_A 187 -------------------------GYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQ---DVVIVNVSRG 237 (333)
T ss_dssp -------------------------TCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCT---TEEEEECSCG
T ss_pred -------------------------CeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCC---CcEEEECCCC
Confidence 001235778888999999999954 355444 233445565 6788888776
No 179
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.58 E-value=0.00017 Score=71.87 Aligned_cols=101 Identities=13% Similarity=0.162 Sum_probs=66.9
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 44 mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
|||+|||+ |.+|++++..|+.. |. .++|.++++++. +. ...-+.. ... +
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~-~~---~~ev~L~Di~~~--~~-----~a~dL~~-------------~~~------~ 50 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS-PL---VSRLTLYDIAHT--PG-----VAADLSH-------------IET------R 50 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC-TT---CSEEEEEESSSH--HH-----HHHHHTT-------------SSS------S
T ss_pred CEEEEECCCChHHHHHHHHHHhC-CC---CcEEEEEeCCcc--HH-----HHHHHhc-------------cCc------C
Confidence 79999998 99999999999977 53 168999999872 11 0000100 000 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEE---ecCHHHHhcCCCEEEEecC--c--------------chHHHHHHHHHHh
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKV---VTNLQEAVWDADIVINGLP--S--------------TETKEVFEEISRY 183 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~---t~dl~eal~~aDiVIlaVp--s--------------~~l~~vl~~l~~~ 183 (465)
..+.. ++|++++++++|+||++.. . ..++++++.+.++
T Consensus 51 -----------------------~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 107 (314)
T 1mld_A 51 -----------------------ATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH 107 (314)
T ss_dssp -----------------------CEEEEEESGGGHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------ceEEEecCCCCHHHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 02444 3678888999999999873 2 2366666777666
Q ss_pred hhccCCCCEEEEeecccc
Q 012349 184 WKERITVPVIISLAKGVE 201 (465)
Q Consensus 184 l~~~~~~~ivIs~~kGi~ 201 (465)
.+ +.+++.++|-++
T Consensus 108 ~p----~a~viv~sNPv~ 121 (314)
T 1mld_A 108 CP----DAMICIISNPVN 121 (314)
T ss_dssp CT----TSEEEECSSCHH
T ss_pred CC----CeEEEEECCCcc
Confidence 53 567777787654
No 180
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.57 E-value=0.00034 Score=70.60 Aligned_cols=97 Identities=18% Similarity=0.155 Sum_probs=64.6
Q ss_pred CCceEEEECccHHHHHHHHHHH-HhcCCCCCCeeEE-EEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQ-DSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La-~~~G~~~~~~~V~-l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
+++||+|||+|.||..++..+. +..+ .++. +++++++.+++. .+. +
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~~~~-----~~lvav~d~~~~~~~~~---------a~~------------~------ 69 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANTVSG-----VEVVAVCDIVAGRAQAA---------LDK------------Y------ 69 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCTT-----EEEEEEECSSTTHHHHH---------HHH------------H------
T ss_pred CeeeEEEECCcHHHHHHHHHHHhhCCC-----cEEEEEEeCCHHHHHHH---------HHH------------h------
Confidence 3579999999999999999998 3312 5644 889988654421 000 0
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEee
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~ 197 (465)
+ + .....+|+++.+. +.|+|++|+|+....+++..... . +..| .+-
T Consensus 70 --g---~--------------------~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~---a---Gk~V-l~E 117 (357)
T 3ec7_A 70 --A---I--------------------EAKDYNDYHDLINDKDVEVVIITASNEAHADVAVAALN---A---NKYV-FCE 117 (357)
T ss_dssp --T---C--------------------CCEEESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHH---T---TCEE-EEE
T ss_pred --C---C--------------------CCeeeCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHH---C---CCCE-Eee
Confidence 0 0 1345678888776 48999999999988777766543 2 3333 466
Q ss_pred ccccc
Q 012349 198 KGVEA 202 (465)
Q Consensus 198 kGi~~ 202 (465)
|-+..
T Consensus 118 KPla~ 122 (357)
T 3ec7_A 118 KPLAV 122 (357)
T ss_dssp SSSCS
T ss_pred cCccC
Confidence 66543
No 181
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=97.57 E-value=5.5e-05 Score=76.13 Aligned_cols=94 Identities=17% Similarity=0.244 Sum_probs=66.1
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
..++|+|||.|.||.++|..+... | .+|..|+|++...+. ....
T Consensus 144 ~g~tvGIIG~G~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~~~--------------------------~~~~---- 187 (330)
T 4e5n_A 144 DNATVGFLGMGAIGLAMADRLQGW-G-----ATLQYHEAKALDTQT--------------------------EQRL---- 187 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHTTTS-C-----CEEEEECSSCCCHHH--------------------------HHHH----
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEECCCCCcHhH--------------------------HHhc----
Confidence 347999999999999999998766 6 899999998632211 0000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH-HHHHHhhhccCCCCEEEEeecc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl-~~l~~~l~~~~~~~ivIs~~kG 199 (465)
.+.. .+++++++.+|+|++++|.. .++.++ ++....+++ ++++|.++.|
T Consensus 188 -------------------------g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---gailIN~arg 238 (330)
T 4e5n_A 188 -------------------------GLRQ-VACSELFASSDFILLALPLNADTLHLVNAELLALVRP---GALLVNPCRG 238 (330)
T ss_dssp -------------------------TEEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCT---TEEEEECSCG
T ss_pred -------------------------Ccee-CCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCC---CcEEEECCCC
Confidence 1222 36788889999999999953 444444 344555665 6888888877
Q ss_pred c
Q 012349 200 V 200 (465)
Q Consensus 200 i 200 (465)
=
T Consensus 239 ~ 239 (330)
T 4e5n_A 239 S 239 (330)
T ss_dssp G
T ss_pred c
Confidence 3
No 182
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.57 E-value=0.00028 Score=70.30 Aligned_cols=95 Identities=13% Similarity=0.067 Sum_probs=63.6
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~-V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
+++||+|||+|.||..++..+.+. + +.+ |.+++++++.+++. ...
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~-~----~~~~~av~d~~~~~~~~~-------------------------a~~---- 49 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLA-G----NGEVVAVSSRTLESAQAF-------------------------ANK---- 49 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHH-C----SEEEEEEECSCSSTTCC----------------------------C----
T ss_pred CceEEEEEechHHHHHHHHHHHhC-C----CcEEEEEEcCCHHHHHHH-------------------------HHH----
Confidence 457999999999999999998876 3 144 44788887644320 000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCe-EEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEee
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~ 197 (465)
+ ++ .+.+|.++.+. +.|+|++|+|+....+++.... .. +..| .+-
T Consensus 50 -----~--------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al---~a---Gk~V-l~E 97 (329)
T 3evn_A 50 -----Y--------------------HLPKAYDKLEDMLADESIDVIYVATINQDHYKVAKAAL---LA---GKHV-LVE 97 (329)
T ss_dssp -----C--------------------CCSCEESCHHHHHTCTTCCEEEECSCGGGHHHHHHHHH---HT---TCEE-EEE
T ss_pred -----c--------------------CCCcccCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHH---HC---CCeE-EEc
Confidence 0 11 25688888887 7899999999988777766543 33 3333 366
Q ss_pred ccccc
Q 012349 198 KGVEA 202 (465)
Q Consensus 198 kGi~~ 202 (465)
|-+..
T Consensus 98 KP~a~ 102 (329)
T 3evn_A 98 KPFTL 102 (329)
T ss_dssp SSCCS
T ss_pred cCCcC
Confidence 66543
No 183
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.56 E-value=0.00029 Score=68.99 Aligned_cols=148 Identities=12% Similarity=0.092 Sum_probs=89.1
Q ss_pred CceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 43 PLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 43 ~mkIaIIG-aGamGsalA~~La~~~G~~~~~~~V~-l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
||||+|+| +|.||..++..+.+..+ .++. +++|+.....- . ....+-+.
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~-----~eLv~~~d~~~~~~~G-----------~----------d~gel~g~--- 57 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPD-----ATLVGALDRTGSPQLG-----------Q----------DAGAFLGK--- 57 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTT-----EEEEEEBCCTTCTTTT-----------S----------BTTTTTTC---
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCC-----CEEEEEEEecCccccc-----------c----------cHHHHhCC---
Confidence 58999999 89999999999887622 5543 45665421100 0 00000010
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
. .++.+++|+++++.++|+||-++++....+.++.... . +..+|+.+.|+
T Consensus 58 -----------------------~-~gv~v~~dl~~ll~~~DVVIDfT~p~a~~~~~~~al~---~---G~~vVigTTG~ 107 (272)
T 4f3y_A 58 -----------------------Q-TGVALTDDIERVCAEADYLIDFTLPEGTLVHLDAALR---H---DVKLVIGTTGF 107 (272)
T ss_dssp -----------------------C-CSCBCBCCHHHHHHHCSEEEECSCHHHHHHHHHHHHH---H---TCEEEECCCCC
T ss_pred -----------------------C-CCceecCCHHHHhcCCCEEEEcCCHHHHHHHHHHHHH---c---CCCEEEECCCC
Confidence 0 1345678999888899999999998877766665543 3 45677777788
Q ss_pred cccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEe
Q 012349 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWD 273 (465)
Q Consensus 201 ~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~ 273 (465)
+.+. . +.|.+... ...++..|||.--+.-= .+.++..++.|. .++.+.+
T Consensus 108 s~~~--------~-~~L~~aa~----~~~vv~a~N~s~Gv~l~----------~~~~~~aa~~l~-~~~diei 156 (272)
T 4f3y_A 108 SEPQ--------K-AQLRAAGE----KIALVFSANMSVGVNVT----------MKLLEFAAKQFA-QGYDIEI 156 (272)
T ss_dssp CHHH--------H-HHHHHHTT----TSEEEECSCCCHHHHHH----------HHHHHHHHHHTS-SSCEEEE
T ss_pred CHHH--------H-HHHHHHhc----cCCEEEECCCCHHHHHH----------HHHHHHHHHhcC-cCCCEEE
Confidence 6541 1 33444432 24568899987633210 134566667775 3455544
No 184
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=97.54 E-value=9.8e-05 Score=74.45 Aligned_cols=92 Identities=24% Similarity=0.246 Sum_probs=65.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
-++|+|||.|.||..+|..+... | .+|..|+|+...... . .
T Consensus 141 g~tvgIiG~G~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~~~-----------~---------------~------- 181 (334)
T 2pi1_A 141 RLTLGVIGTGRIGSRVAMYGLAF-G-----MKVLCYDVVKREDLK-----------E---------------K------- 181 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCHHHH-----------H---------------T-------
T ss_pred CceEEEECcCHHHHHHHHHHHHC-c-----CEEEEECCCcchhhH-----------h---------------c-------
Confidence 47999999999999999999877 7 899999998642110 0 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH-HHHHHhhhccCCCCEEEEeeccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl-~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
.+.. .+++++++.||+|++++|.. .++.++ ++....+++ ++++|.++-|=
T Consensus 182 ------------------------g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---gailIN~aRg~ 233 (334)
T 2pi1_A 182 ------------------------GCVY-TSLDELLKESDVISLHVPYTKETHHMINEERISLMKD---GVYLINTARGK 233 (334)
T ss_dssp ------------------------TCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCT---TEEEEECSCGG
T ss_pred ------------------------Ccee-cCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCC---CcEEEECCCCc
Confidence 1222 34788899999999999953 444433 334445565 67888888774
Q ss_pred c
Q 012349 201 E 201 (465)
Q Consensus 201 ~ 201 (465)
.
T Consensus 234 ~ 234 (334)
T 2pi1_A 234 V 234 (334)
T ss_dssp G
T ss_pred c
Confidence 3
No 185
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.54 E-value=0.00046 Score=69.48 Aligned_cols=95 Identities=17% Similarity=0.135 Sum_probs=63.1
Q ss_pred CCceEEEECccHHHH-HHHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 42 DPLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 42 ~~mkIaIIGaGamGs-alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
+++||+|||+|.||. .++..|.+. . +.+|. +++++++.+++. .+. +
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~~-~----~~~l~av~d~~~~~~~~~--------a~~-------------~------ 73 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEAE-P----LTEVTAIASRRWDRAKRF--------TER-------------F------ 73 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHC-T----TEEEEEEEESSHHHHHHH--------HHH-------------H------
T ss_pred CceEEEEEcCcHHHHHHHHHHHHhC-C----CeEEEEEEcCCHHHHHHH--------HHH-------------c------
Confidence 357999999999998 788888765 2 25654 888887644321 000 0
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEee
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~ 197 (465)
++...+|+++.+. +.|+|++|+|.....+++..... . +..| .+-
T Consensus 74 ---------------------------g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~---a---Gk~V-l~E 119 (350)
T 3rc1_A 74 ---------------------------GGEPVEGYPALLERDDVDAVYVPLPAVLHAEWIDRALR---A---GKHV-LAE 119 (350)
T ss_dssp ---------------------------CSEEEESHHHHHTCTTCSEEEECCCGGGHHHHHHHHHH---T---TCEE-EEE
T ss_pred ---------------------------CCCCcCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHH---C---CCcE-EEe
Confidence 1233478888775 58999999999988777766543 2 3333 466
Q ss_pred ccccc
Q 012349 198 KGVEA 202 (465)
Q Consensus 198 kGi~~ 202 (465)
|-+..
T Consensus 120 KP~a~ 124 (350)
T 3rc1_A 120 KPLTT 124 (350)
T ss_dssp SSSCS
T ss_pred CCCCC
Confidence 66544
No 186
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.52 E-value=0.00028 Score=70.96 Aligned_cols=95 Identities=20% Similarity=0.366 Sum_probs=62.3
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~-V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
+++||+|||+|.||..++..+.+. . +.+ |.+++++++.+++. .+. +
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~-~----~~~lvav~d~~~~~~~~~--------~~~-------------~------- 50 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKS-E----KLKLVTCYSRTEDKREKF--------GKR-------------Y------- 50 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTC-S----SEEEEEEECSSHHHHHHH--------HHH-------------H-------
T ss_pred CcceEEEEccCHHHHHHHHHHHhC-C----CcEEEEEECCCHHHHHHH--------HHH-------------c-------
Confidence 457999999999999999988764 2 256 44888887654321 000 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHh--cCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeec
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV--WDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal--~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~k 198 (465)
++...+|+++++ .+.|+|++|+|+....+++..... . +..| .+-|
T Consensus 51 --------------------------g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~---~---gk~v-l~EK 97 (354)
T 3db2_A 51 --------------------------NCAGDATMEALLAREDVEMVIITVPNDKHAEVIEQCAR---S---GKHI-YVEK 97 (354)
T ss_dssp --------------------------TCCCCSSHHHHHHCSSCCEEEECSCTTSHHHHHHHHHH---T---TCEE-EEES
T ss_pred --------------------------CCCCcCCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHH---c---CCEE-EEcc
Confidence 111256778877 568999999999877776665433 2 3333 4666
Q ss_pred cccc
Q 012349 199 GVEA 202 (465)
Q Consensus 199 Gi~~ 202 (465)
-+..
T Consensus 98 P~~~ 101 (354)
T 3db2_A 98 PISV 101 (354)
T ss_dssp SSCS
T ss_pred CCCC
Confidence 5543
No 187
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.52 E-value=0.00037 Score=61.37 Aligned_cols=105 Identities=6% Similarity=-0.002 Sum_probs=64.5
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc-hhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG-RSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~-~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
++|.|+|+|.+|..++..|.+. | ++|+++++++ +..+.+. +....+ ...+.+
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~-g-----~~V~vid~~~~~~~~~~~-----~~~~~~----------~~~i~g------ 56 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR-G-----QNVTVISNLPEDDIKQLE-----QRLGDN----------ADVIPG------ 56 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECCCHHHHHHHH-----HHHCTT----------CEEEES------
T ss_pred CcEEEECCCHHHHHHHHHHHHC-C-----CCEEEEECCChHHHHHHH-----HhhcCC----------CeEEEc------
Confidence 5899999999999999999988 7 8999999974 4332211 000000 000100
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHH-hcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEA-VWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~ea-l~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
+ ..-...+.++ +.++|+||++++.+.....+....+.+.+ ...++..+++-.
T Consensus 57 d------------------------~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~---~~~ii~~~~~~~ 109 (153)
T 1id1_A 57 D------------------------SNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMSS---DVKTVLAVSDSK 109 (153)
T ss_dssp C------------------------TTSHHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHHTS---SSCEEEECSSGG
T ss_pred C------------------------CCCHHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHHCC---CCEEEEEECCHH
Confidence 0 0000123344 78999999999998776666555554433 345666666554
Q ss_pred c
Q 012349 202 A 202 (465)
Q Consensus 202 ~ 202 (465)
.
T Consensus 110 ~ 110 (153)
T 1id1_A 110 N 110 (153)
T ss_dssp G
T ss_pred H
Confidence 4
No 188
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.52 E-value=0.00032 Score=61.95 Aligned_cols=96 Identities=13% Similarity=0.107 Sum_probs=65.0
Q ss_pred HHHhhhhcCCCCCCceEEEECc----cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHH
Q 012349 30 DELRRLMGKAEGDPLRIVGVGA----GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLR 105 (465)
Q Consensus 30 ~~~~~~~~~~~~~~mkIaIIGa----GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~ 105 (465)
+.++++|.. +.+|+|||+ |.+|..++..|.+. | ++ +|..++.. +.
T Consensus 13 ~~l~~ll~~----p~~iaVVGas~~~g~~G~~~~~~l~~~-G-----~~--v~~Vnp~~-~~------------------ 61 (144)
T 2d59_A 13 EDIREILTR----YKKIALVGASPKPERDANIVMKYLLEH-G-----YD--VYPVNPKY-EE------------------ 61 (144)
T ss_dssp HHHHHHHHH----CCEEEEETCCSCTTSHHHHHHHHHHHT-T-----CE--EEEECTTC-SE------------------
T ss_pred HHHHHHHcC----CCEEEEEccCCCCCchHHHHHHHHHHC-C-----CE--EEEECCCC-Ce------------------
Confidence 346666621 468999999 79999999999887 7 65 67766631 10
Q ss_pred hhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhh
Q 012349 106 RLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWK 185 (465)
Q Consensus 106 ~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~ 185 (465)
+. ++.+..++++.....|+++++||+....++++++...-.
T Consensus 62 --------i~-------------------------------G~~~y~sl~~l~~~vDlvvi~vp~~~~~~vv~~~~~~gi 102 (144)
T 2d59_A 62 --------VL-------------------------------GRKCYPSVLDIPDKIEVVDLFVKPKLTMEYVEQAIKKGA 102 (144)
T ss_dssp --------ET-------------------------------TEECBSSGGGCSSCCSEEEECSCHHHHHHHHHHHHHHTC
T ss_pred --------EC-------------------------------CeeccCCHHHcCCCCCEEEEEeCHHHHHHHHHHHHHcCC
Confidence 11 123334555555578999999999999999988765321
Q ss_pred ccCCCCEEEEeecccc
Q 012349 186 ERITVPVIISLAKGVE 201 (465)
Q Consensus 186 ~~~~~~ivIs~~kGi~ 201 (465)
+ .+.++.|..
T Consensus 103 ----~--~i~~~~g~~ 112 (144)
T 2d59_A 103 ----K--VVWFQYNTY 112 (144)
T ss_dssp ----S--EEEECTTCC
T ss_pred ----C--EEEECCCch
Confidence 2 234667765
No 189
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.51 E-value=0.00035 Score=69.10 Aligned_cols=40 Identities=20% Similarity=0.281 Sum_probs=29.7
Q ss_pred CCceEEEECccHHHHH-HHHHHHHhcCCCCCCeeEE-EEecCchhhh
Q 012349 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVD 86 (465)
Q Consensus 42 ~~mkIaIIGaGamGsa-lA~~La~~~G~~~~~~~V~-l~~r~~~~~~ 86 (465)
+++||+|||+|.||.. ++..+.+..+ .++. +++++++..+
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~~~~-----~~lvav~d~~~~~~~ 45 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAAASD-----WTLQGAWSPTRAKAL 45 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHSCSS-----EEEEEEECSSCTTHH
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCC-----eEEEEEECCCHHHHH
Confidence 3589999999999996 8887765413 5655 8899886543
No 190
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=97.51 E-value=9e-05 Score=74.56 Aligned_cols=90 Identities=18% Similarity=0.181 Sum_probs=64.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
.++|+|||.|.||..+|..+... | .+|..|+|+.+.. ...
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~----------------------------~~~------ 185 (331)
T 1xdw_A 146 NCTVGVVGLGRIGRVAAQIFHGM-G-----ATVIGEDVFEIKG----------------------------IED------ 185 (331)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCCS----------------------------CTT------
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEECCCccHH----------------------------HHh------
Confidence 37999999999999999999876 7 8999999876311 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH-HHHHHhhhccCCCCEEEEeeccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl-~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
.+. ..++++++..+|+|++++|.. .++.++ ++..+.+++ ++++|.++.|=
T Consensus 186 ------------------------~~~-~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~---ga~lin~srg~ 237 (331)
T 1xdw_A 186 ------------------------YCT-QVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKD---GAILVNCARGQ 237 (331)
T ss_dssp ------------------------TCE-ECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCT---TEEEEECSCGG
T ss_pred ------------------------ccc-cCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCC---CcEEEECCCcc
Confidence 011 236778889999999999964 444444 234445565 67888888773
No 191
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.50 E-value=0.00029 Score=69.27 Aligned_cols=37 Identities=14% Similarity=0.198 Sum_probs=32.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (465)
..++|+|||+|.+|.++|..+... | .+|++|+|+.+.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~-G-----~~V~~~dr~~~~ 190 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAAL-G-----AKVKVGARESDL 190 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESSHHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC-C-----CEEEEEECCHHH
Confidence 457999999999999999999877 7 799999998753
No 192
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.48 E-value=0.00015 Score=72.72 Aligned_cols=38 Identities=11% Similarity=0.287 Sum_probs=31.3
Q ss_pred CCceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 42 DPLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 42 ~~mkIaIIG-aGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
++|||+|+| +|.+|.+++..|+.. |. .++|.+++++++
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~-g~---~~ev~l~Di~~~ 45 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMN-PL---VSVLHLYDVVNA 45 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHC-TT---EEEEEEEESSSH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC-CC---CCEEEEEeCCCc
Confidence 568999999 799999999999876 52 168999998874
No 193
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.48 E-value=7.2e-05 Score=75.91 Aligned_cols=78 Identities=13% Similarity=0.181 Sum_probs=55.1
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
+.++|+|||+|.||.+++..|....+ ..+|.+|+|++++.+++ .+.+.. .+++
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~----~~~V~V~~r~~~~a~~l-----a~~~~~--------------~~g~---- 180 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLG----IEEIVAYDTDPLATAKL-----IANLKE--------------YSGL---- 180 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSC----CCEEEEECSSHHHHHHH-----HHHHTT--------------CTTC----
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCC----CcEEEEEcCCHHHHHHH-----HHHHHh--------------ccCc----
Confidence 45799999999999999988765312 16899999998765531 111100 0010
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST 171 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~ 171 (465)
.+...+++++++.++|+||.|||+.
T Consensus 181 -------------------------~~~~~~~~~eav~~aDiVi~aTps~ 205 (350)
T 1x7d_A 181 -------------------------TIRRASSVAEAVKGVDIITTVTADK 205 (350)
T ss_dssp -------------------------EEEECSSHHHHHTTCSEEEECCCCS
T ss_pred -------------------------eEEEeCCHHHHHhcCCEEEEeccCC
Confidence 2445678889999999999999986
No 194
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=97.48 E-value=0.00023 Score=72.58 Aligned_cols=92 Identities=18% Similarity=0.172 Sum_probs=64.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
-++|+|||.|.||..+|..+... | .+|..|+++... +. ...
T Consensus 176 gktvGIIGlG~IG~~vA~~l~~f-G-----~~V~~~d~~~~~-~~--------------------------~~~------ 216 (365)
T 4hy3_A 176 GSEIGIVGFGDLGKALRRVLSGF-R-----ARIRVFDPWLPR-SM--------------------------LEE------ 216 (365)
T ss_dssp SSEEEEECCSHHHHHHHHHHTTS-C-----CEEEEECSSSCH-HH--------------------------HHH------
T ss_pred CCEEEEecCCcccHHHHHhhhhC-C-----CEEEEECCCCCH-HH--------------------------Hhh------
Confidence 47999999999999999998755 6 899999987521 10 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH-HHHHHhhhccCCCCEEEEeeccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl-~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
..+. ..+++++++.+|+|++++|.. .++.++ ++....+++ ++++|.++-|=
T Consensus 217 -----------------------~g~~-~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~---gailIN~aRG~ 269 (365)
T 4hy3_A 217 -----------------------NGVE-PASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRR---GAAFILLSRAD 269 (365)
T ss_dssp -----------------------TTCE-ECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCT---TCEEEECSCGG
T ss_pred -----------------------cCee-eCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCC---CcEEEECcCCc
Confidence 0122 247888899999999999954 555555 344455666 68899888773
No 195
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=97.47 E-value=0.00013 Score=73.42 Aligned_cols=89 Identities=13% Similarity=0.180 Sum_probs=63.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
.++|+|||.|.||..+|..+... | .+|..|+|+.... ...
T Consensus 145 g~~vgIiG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~----------------------------~~~------ 184 (333)
T 1dxy_A 145 QQTVGVMGTGHIGQVAIKLFKGF-G-----AKVIAYDPYPMKG----------------------------DHP------ 184 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCSS----------------------------CCT------
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEECCCcchh----------------------------hHh------
Confidence 47999999999999999999876 7 8999999876310 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH-HHHHHhhhccCCCCEEEEeecc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl-~~l~~~l~~~~~~~ivIs~~kG 199 (465)
.... .+++++++.+|+|++++|.. .++.++ ++....+++ ++++|.++-|
T Consensus 185 ------------------------~~~~-~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~---ga~lIn~srg 235 (333)
T 1dxy_A 185 ------------------------DFDY-VSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKP---GAIVINTARP 235 (333)
T ss_dssp ------------------------TCEE-CCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCT---TEEEEECSCT
T ss_pred ------------------------cccc-CCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCC---CcEEEECCCC
Confidence 0112 36778889999999999964 344444 334445665 6788887766
No 196
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.46 E-value=0.00029 Score=69.41 Aligned_cols=95 Identities=21% Similarity=0.255 Sum_probs=63.6
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 40 ~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
+...++|+|||+|.+|.++|..+... | .+|++|+|+.+..+. +.+ + +.
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~-G-----~~V~~~d~~~~~~~~---------~~~--------------~-g~-- 201 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAAL-G-----ANVKVGARSSAHLAR---------ITE--------------M-GL-- 201 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESSHHHHHH---------HHH--------------T-TC--
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHH---------HHH--------------C-CC--
Confidence 33458999999999999999999877 7 799999998753321 000 0 00
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecc
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kG 199 (465)
......++++.++.+|+|++++|...+.+ .....+++ +.++|.++-|
T Consensus 202 ---------------------------~~~~~~~l~~~l~~aDvVi~~~p~~~i~~---~~~~~mk~---g~~lin~a~g 248 (300)
T 2rir_A 202 ---------------------------VPFHTDELKEHVKDIDICINTIPSMILNQ---TVLSSMTP---KTLILDLASR 248 (300)
T ss_dssp ---------------------------EEEEGGGHHHHSTTCSEEEECCSSCCBCH---HHHTTSCT---TCEEEECSST
T ss_pred ---------------------------eEEchhhHHHHhhCCCEEEECCChhhhCH---HHHHhCCC---CCEEEEEeCC
Confidence 00012456777889999999999854322 22234555 5778877754
No 197
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.45 E-value=0.00066 Score=67.66 Aligned_cols=80 Identities=20% Similarity=0.222 Sum_probs=56.0
Q ss_pred CCceEEEECccHHHHHHHHHHH-HhcCCCCCCee-EEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQ-DSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La-~~~G~~~~~~~-V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
+++||+|||+|.||..++..+. +..+ .+ |.+++++++.++.. .+ .+
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~-----~~~vav~d~~~~~~~~~---------a~-------------~~----- 54 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQG-----VKLVAACALDSNQLEWA---------KN-------------EL----- 54 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSS-----EEEEEEECSCHHHHHHH---------HH-------------TT-----
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCC-----cEEEEEecCCHHHHHHH---------HH-------------Hh-----
Confidence 4689999999999999999987 4313 55 56788887644320 00 00
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCe-EEecCHHHHhc--CCCEEEEecCcchHHHHHHHH
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVW--DADIVINGLPSTETKEVFEEI 180 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l 180 (465)
++ .+.+|.++.+. ++|+|++|+|+....+++...
T Consensus 55 ---------------------------g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~a 91 (346)
T 3cea_A 55 ---------------------------GVETTYTNYKDMIDTENIDAIFIVAPTPFHPEMTIYA 91 (346)
T ss_dssp ---------------------------CCSEEESCHHHHHTTSCCSEEEECSCGGGHHHHHHHH
T ss_pred ---------------------------CCCcccCCHHHHhcCCCCCEEEEeCChHhHHHHHHHH
Confidence 11 34577888775 689999999998777666654
No 198
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.44 E-value=0.00036 Score=68.97 Aligned_cols=92 Identities=15% Similarity=0.276 Sum_probs=62.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~-V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
+++||+|||+|.||..++..|.+. + +.+ |.+++++++.+++ +..
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~-~----~~~~v~v~d~~~~~~~~--------------------------~~~---- 53 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGL-P----GAALVRLASSNPDNLAL--------------------------VPP---- 53 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHC-T----TEEEEEEEESCHHHHTT--------------------------CCT----
T ss_pred CcceEEEECCcHHHHHHHHHHHhC-C----CcEEEEEEeCCHHHHHH--------------------------HHh----
Confidence 458999999999999999999875 2 155 5588888753321 100
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeec
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~k 198 (465)
.+...+|.++++. ++|+|++|+|+....+++.... +. +..|+ +-|
T Consensus 54 --------------------------~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al---~~---Gk~v~-~eK 100 (315)
T 3c1a_A 54 --------------------------GCVIESDWRSVVSAPEVEAVIIATPPATHAEITLAAI---AS---GKAVL-VEK 100 (315)
T ss_dssp --------------------------TCEEESSTHHHHTCTTCCEEEEESCGGGHHHHHHHHH---HT---TCEEE-EES
T ss_pred --------------------------hCcccCCHHHHhhCCCCCEEEEeCChHHHHHHHHHHH---HC---CCcEE-EcC
Confidence 1234567777775 7899999999998877776543 33 34444 566
Q ss_pred ccc
Q 012349 199 GVE 201 (465)
Q Consensus 199 Gi~ 201 (465)
-+.
T Consensus 101 P~~ 103 (315)
T 3c1a_A 101 PLT 103 (315)
T ss_dssp SSC
T ss_pred CCc
Confidence 543
No 199
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=97.43 E-value=0.00013 Score=74.79 Aligned_cols=92 Identities=23% Similarity=0.242 Sum_probs=63.8
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
..++|+|||.|.||..+|..+... | .+|..|++..+... .
T Consensus 118 ~gktvGIIGlG~IG~~vA~~l~a~-G-----~~V~~~d~~~~~~~----------------------------~------ 157 (381)
T 3oet_A 118 RDRTIGIVGVGNVGSRLQTRLEAL-G-----IRTLLCDPPRAARG----------------------------D------ 157 (381)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECHHHHHTT----------------------------C------
T ss_pred CCCEEEEEeECHHHHHHHHHHHHC-C-----CEEEEECCChHHhc----------------------------c------
Confidence 347999999999999999999877 7 89999987532100 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-h----HHHHH-HHHHHhhhccCCCCEEEE
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-E----TKEVF-EEISRYWKERITVPVIIS 195 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~----l~~vl-~~l~~~l~~~~~~~ivIs 195 (465)
.. ...+++++++.||+|++++|.. . ++.++ ++....+++ ++++|.
T Consensus 158 -------------------------~~-~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~---gailIN 208 (381)
T 3oet_A 158 -------------------------EG-DFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKP---GAILIN 208 (381)
T ss_dssp -------------------------CS-CBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCT---TEEEEE
T ss_pred -------------------------Cc-ccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCC---CcEEEE
Confidence 00 1246788899999999999943 2 33333 233344555 688988
Q ss_pred eeccccc
Q 012349 196 LAKGVEA 202 (465)
Q Consensus 196 ~~kGi~~ 202 (465)
++-|=..
T Consensus 209 ~aRG~vv 215 (381)
T 3oet_A 209 ACRGPVV 215 (381)
T ss_dssp CSCGGGB
T ss_pred CCCCccc
Confidence 8877433
No 200
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=97.42 E-value=8.9e-05 Score=76.05 Aligned_cols=91 Identities=16% Similarity=0.193 Sum_probs=64.4
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 41 ~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
...++|+|||.|.||..+|..|... | .+|..|+++.+.. . . +
T Consensus 114 l~g~tvGIIGlG~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~-------------~--------------~-g---- 155 (380)
T 2o4c_A 114 LAERTYGVVGAGQVGGRLVEVLRGL-G-----WKVLVCDPPRQAR-------------E--------------P-D---- 155 (380)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECHHHHHH-------------S--------------T-T----
T ss_pred cCCCEEEEEeCCHHHHHHHHHHHHC-C-----CEEEEEcCChhhh-------------c--------------c-C----
Confidence 3457999999999999999999877 7 8999998764210 0 0 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcch-----HHHHH-HHHHHhhhccCCCCEEE
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-----TKEVF-EEISRYWKERITVPVII 194 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~-----l~~vl-~~l~~~l~~~~~~~ivI 194 (465)
.. ..+++++++.||+|++++|... ++.++ ++....+++ ++++|
T Consensus 156 ---------------------------~~-~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~---gailI 204 (380)
T 2o4c_A 156 ---------------------------GE-FVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRP---GTWLV 204 (380)
T ss_dssp ---------------------------SC-CCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCT---TEEEE
T ss_pred ---------------------------cc-cCCHHHHHHhCCEEEEeccCccccccchhhhcCHHHHhhCCC---CcEEE
Confidence 00 1457788889999999999543 44444 334455665 67888
Q ss_pred Eeeccc
Q 012349 195 SLAKGV 200 (465)
Q Consensus 195 s~~kGi 200 (465)
.++.|=
T Consensus 205 N~sRG~ 210 (380)
T 2o4c_A 205 NASRGA 210 (380)
T ss_dssp ECSCGG
T ss_pred ECCCCc
Confidence 888773
No 201
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.42 E-value=0.00056 Score=68.51 Aligned_cols=110 Identities=14% Similarity=0.159 Sum_probs=68.8
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCC--CCeeEEEEecC----chhhhhhhhhhhHHHHhchhhhHHhhhhccccc
Q 012349 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLR--DKVLIRIWRRP----GRSVDRATAEHLFEVINSREDVLRRLIRRCAYL 114 (465)
Q Consensus 42 ~~mkIaIIGa-GamGsalA~~La~~~G~~~--~~~~V~l~~r~----~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l 114 (465)
++|||+|+|+ |.+|+.++..|+.. |.+. ...+|.+++++ ++.++. ...-+... ..
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~-~~~~~~~~~ev~l~Di~~~~~~~~~~g-----~~~dl~~~------------~~ 65 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANG-DMLGKDQPVILQLLEIPNEKAQKALQG-----VMMEIDDC------------AF 65 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTT-TTTCTTCCEEEEEECCSCHHHHHHHHH-----HHHHHHTT------------TC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC-CCcCCCCCCEEEEEcCCCccccccchh-----hHHHHhhh------------cc
Confidence 4689999998 99999999999887 6321 01389999988 432221 00001100 00
Q ss_pred chhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc----------------hHHHHHH
Q 012349 115 KYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFE 178 (465)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~----------------~l~~vl~ 178 (465)
+. ...+..+++..+++++||+||++.... .+.++++
T Consensus 66 ~~----------------------------~~~i~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~ 117 (329)
T 1b8p_A 66 PL----------------------------LAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGK 117 (329)
T ss_dssp TT----------------------------EEEEEEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cc----------------------------cCcEEEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 00 013667789889999999999876311 2555666
Q ss_pred HHHHhhhccCCCCEEEEeeccc
Q 012349 179 EISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 179 ~l~~~l~~~~~~~ivIs~~kGi 200 (465)
.+..+..+ +.++|.++|-+
T Consensus 118 ~i~~~~~p---~a~ii~~SNPv 136 (329)
T 1b8p_A 118 AIDAVASR---NIKVLVVGNPA 136 (329)
T ss_dssp HHHHHSCT---TCEEEECSSSH
T ss_pred HHHHhcCC---CeEEEEccCch
Confidence 66665423 56788888744
No 202
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.39 E-value=0.00021 Score=62.92 Aligned_cols=99 Identities=18% Similarity=0.142 Sum_probs=66.7
Q ss_pred HHHhhhhcCCCCCCceEEEECc----cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHH
Q 012349 30 DELRRLMGKAEGDPLRIVGVGA----GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLR 105 (465)
Q Consensus 30 ~~~~~~~~~~~~~~mkIaIIGa----GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~ 105 (465)
+++++++. .+.+|+|||+ |.+|..++..|.+. | ++ +|..++.....
T Consensus 4 ~~l~~ll~----~p~~vaVvGas~~~g~~G~~~~~~l~~~-G-----~~--v~~vnp~~~~~------------------ 53 (140)
T 1iuk_A 4 QELRAYLS----QAKTIAVLGAHKDPSRPAHYVPRYLREQ-G-----YR--VLPVNPRFQGE------------------ 53 (140)
T ss_dssp HHHHHHHH----HCCEEEEETCCSSTTSHHHHHHHHHHHT-T-----CE--EEEECGGGTTS------------------
T ss_pred HHHHHHHc----CCCEEEEECCCCCCCChHHHHHHHHHHC-C-----CE--EEEeCCCcccC------------------
Confidence 45667771 2478999999 89999999999888 7 65 77777642110
Q ss_pred hhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhh
Q 012349 106 RLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWK 185 (465)
Q Consensus 106 ~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~ 185 (465)
.+. ++.+..+++++-...|+++++||+....++++++...--
T Consensus 54 -------~i~-------------------------------G~~~~~sl~el~~~vDlavi~vp~~~~~~v~~~~~~~gi 95 (140)
T 1iuk_A 54 -------ELF-------------------------------GEEAVASLLDLKEPVDILDVFRPPSALMDHLPEVLALRP 95 (140)
T ss_dssp -------EET-------------------------------TEECBSSGGGCCSCCSEEEECSCHHHHTTTHHHHHHHCC
T ss_pred -------cCC-------------------------------CEEecCCHHHCCCCCCEEEEEeCHHHHHHHHHHHHHcCC
Confidence 011 233344555555578999999999999999988765321
Q ss_pred ccCCCCEEEEeeccccc
Q 012349 186 ERITVPVIISLAKGVEA 202 (465)
Q Consensus 186 ~~~~~~ivIs~~kGi~~ 202 (465)
+. + .++.|+..
T Consensus 96 ----~~-i-~~~~g~~~ 106 (140)
T 1iuk_A 96 ----GL-V-WLQSGIRH 106 (140)
T ss_dssp ----SC-E-EECTTCCC
T ss_pred ----CE-E-EEcCCcCH
Confidence 23 3 35667653
No 203
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.35 E-value=0.0015 Score=66.12 Aligned_cols=130 Identities=19% Similarity=0.213 Sum_probs=70.2
Q ss_pred EeecchhHHHhHHHhhhhcCCCCCCceEEEECc-cHHHHHHHHHHHHhcCCCCCC--eeEEEEecCchhhhhhhhhhhHH
Q 012349 19 HHTNGSLEERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDK--VLIRIWRRPGRSVDRATAEHLFE 95 (465)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIGa-GamGsalA~~La~~~G~~~~~--~~V~l~~r~~~~~~~i~~~~l~~ 95 (465)
||.-|.++.+ -++.......||+|+|| |.+|.+++..|+.. ..+.++ .++.|+|.++.. +..+ ++.
T Consensus 6 ~~~~~~~~~~------~~~~~s~~~vKVaViGAaG~IG~~la~~la~~-~l~~~~~~~eL~L~Di~~~~-~~~~--Gva- 74 (345)
T 4h7p_A 6 HHHMGTLEAQ------TQGPGSMSAVKVAVTGAAGQIGYALVPLIARG-ALLGPTTPVELRLLDIEPAL-KALA--GVE- 74 (345)
T ss_dssp ----------------------CCCEEEEEESTTSHHHHHHHHHHHHT-TTTCTTCCEEEEEECCGGGH-HHHH--HHH-
T ss_pred cccccccccc------ccCCCCCCCCEEEEECcCcHHHHHHHHHHHhc-cccCCCCccEEEEECCCCcc-ccch--hhh-
Confidence 5556777765 23333334569999996 99999999999986 433221 379999987632 1111 110
Q ss_pred HHhchhhhHHhhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--Ccc--
Q 012349 96 VINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PST-- 171 (465)
Q Consensus 96 ~i~~~~~~~~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaV--ps~-- 171 (465)
++-.+ . -.+ + ...+..++|..+++++||+||++- |-.
T Consensus 75 -~DL~~---------~-~~~----------~------------------~~~~~~~~~~~~a~~~advVvi~aG~prkpG 115 (345)
T 4h7p_A 75 -AELED---------C-AFP----------L------------------LDKVVVTADPRVAFDGVAIAIMCGAFPRKAG 115 (345)
T ss_dssp -HHHHH---------T-TCT----------T------------------EEEEEEESCHHHHTTTCSEEEECCCCCCCTT
T ss_pred -hhhhh---------c-Ccc----------C------------------CCcEEEcCChHHHhCCCCEEEECCCCCCCCC
Confidence 10000 0 001 0 014667889989999999999965 321
Q ss_pred ------------hHHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 172 ------------ETKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 172 ------------~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
-++++.+.|.++..+ +.+|+.++|-++
T Consensus 116 mtR~DLl~~Na~I~~~~~~~i~~~a~~---~~~vlvvsNPvd 154 (345)
T 4h7p_A 116 MERKDLLEMNARIFKEQGEAIAAVAAS---DCRVVVVGNPAN 154 (345)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHSCT---TCEEEECSSSHH
T ss_pred CCHHHHHHHhHHHHHHHHHHHHhhccC---ceEEEEeCCCcc
Confidence 355555666665444 567777887754
No 204
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.35 E-value=0.00028 Score=70.00 Aligned_cols=39 Identities=15% Similarity=0.293 Sum_probs=29.8
Q ss_pred CceEEEECccHHHH-HHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 43 PLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 43 ~mkIaIIGaGamGs-alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
++||+|||+|.||. +++..|.+..+ .+|.+++++++..+
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~-----~~l~v~d~~~~~~~ 41 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPD-----IELVLCTRNPKVLG 41 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTT-----EEEEEECSCHHHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCC-----ceEEEEeCCHHHHH
Confidence 47999999999998 58888865412 66668999876544
No 205
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.35 E-value=0.0004 Score=70.68 Aligned_cols=42 Identities=21% Similarity=0.352 Sum_probs=33.3
Q ss_pred CCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012349 39 AEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (465)
Q Consensus 39 ~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (465)
.+++.+||+|||+|.||..++..|++. ++|++++|+.+++++
T Consensus 12 ~~~~~~~v~IiGaG~iG~~ia~~L~~~-------~~V~V~~R~~~~a~~ 53 (365)
T 2z2v_A 12 IEGRHMKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNNENLEK 53 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCHHHHHH
T ss_pred ccCCCCeEEEEcCCHHHHHHHHHHHcC-------CeEEEEECCHHHHHH
Confidence 455668999999999999999999865 689999999876543
No 206
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.35 E-value=0.00086 Score=68.76 Aligned_cols=118 Identities=18% Similarity=0.173 Sum_probs=64.2
Q ss_pred Eeecch-hH-HHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCC----CCCCee-EEEEecCchhhhhhhhh
Q 012349 19 HHTNGS-LE-ERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGY----LRDKVL-IRIWRRPGRSVDRATAE 91 (465)
Q Consensus 19 ~~~~~~-~~-~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~----~~~~~~-V~l~~r~~~~~~~i~~~ 91 (465)
||.+|+ |. |.|.. ..+.+++||+|||+|.||...+..+.+. +. +.++.+ |-+++++++.+++.
T Consensus 6 ~~~~~~~~~~~~~~~------~~Ms~klrvgiIG~G~ig~~h~~~~~~~-~~~~~~~~~~~elvav~d~~~~~a~~~--- 75 (412)
T 4gqa_A 6 HHSSGVDLGTENLYF------QSMSARLNIGLIGSGFMGQAHADAYRRA-AMFYPDLPKRPHLYALADQDQAMAERH--- 75 (412)
T ss_dssp -------------------------CEEEEEEECCSHHHHHHHHHHHHH-HHHCTTSSSEEEEEEEECSSHHHHHHH---
T ss_pred ccccccccccccCcc------ccccccceEEEEcCcHHHHHHHHHHHhc-cccccccCCCeEEEEEEcCCHHHHHHH---
Confidence 677887 43 22322 2223568999999999999988888764 20 011134 44778887654431
Q ss_pred hhHHHHhchhhhHHhhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecC
Q 012349 92 HLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLP 169 (465)
Q Consensus 92 ~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVp 169 (465)
.+. ++ ...+.+|.++.+. +.|+|++|||
T Consensus 76 ------a~~-------------~~-------------------------------~~~~y~d~~~ll~~~~vD~V~I~tp 105 (412)
T 4gqa_A 76 ------AAK-------------LG-------------------------------AEKAYGDWRELVNDPQVDVVDITSP 105 (412)
T ss_dssp ------HHH-------------HT-------------------------------CSEEESSHHHHHHCTTCCEEEECSC
T ss_pred ------HHH-------------cC-------------------------------CCeEECCHHHHhcCCCCCEEEECCC
Confidence 000 00 1135678888775 5799999999
Q ss_pred cchHHHHHHHHHHhhhccCCCCEEEEeecccccc
Q 012349 170 STETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (465)
Q Consensus 170 s~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~~ 203 (465)
.....+++..... . +.. |.+-|-+...
T Consensus 106 ~~~H~~~~~~al~---a---Gkh-Vl~EKP~a~~ 132 (412)
T 4gqa_A 106 NHLHYTMAMAAIA---A---GKH-VYCEKPLAVN 132 (412)
T ss_dssp GGGHHHHHHHHHH---T---TCE-EEEESCSCSS
T ss_pred cHHHHHHHHHHHH---c---CCC-eEeecCCcCC
Confidence 9887776665543 2 333 4477776543
No 207
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.32 E-value=0.00078 Score=66.73 Aligned_cols=78 Identities=17% Similarity=0.085 Sum_probs=53.3
Q ss_pred ceEEEECccHHHHHH-HHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 44 LRIVGVGAGAWGSVF-TAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 44 mkIaIIGaGamGsal-A~~La~~~G~~~~~~~V-~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
|||+|||+|.||..+ +..|.+. + .++ .+++++++..++. .+. +.
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~-~-----~~~vav~d~~~~~~~~~---------~~~-------------~g------ 46 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRAT-G-----GEVVSMMSTSAERGAAY---------ATE-------------NG------ 46 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHT-T-----CEEEEEECSCHHHHHHH---------HHH-------------TT------
T ss_pred CeEEEEcccHHHHHhhhHHhhcC-C-----CeEEEEECCCHHHHHHH---------HHH-------------cC------
Confidence 589999999999998 7777664 5 554 5889887644321 000 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHH
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEI 180 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l 180 (465)
...+.+|.++.+. ++|+|++|||+....+++...
T Consensus 47 -------------------------~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~a 82 (332)
T 2glx_A 47 -------------------------IGKSVTSVEELVGDPDVDAVYVSTTNELHREQTLAA 82 (332)
T ss_dssp -------------------------CSCCBSCHHHHHTCTTCCEEEECSCGGGHHHHHHHH
T ss_pred -------------------------CCcccCCHHHHhcCCCCCEEEEeCChhHhHHHHHHH
Confidence 0013467777775 489999999998877776654
No 208
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.31 E-value=0.0012 Score=65.35 Aligned_cols=36 Identities=14% Similarity=0.032 Sum_probs=29.9
Q ss_pred ceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEec--Cch
Q 012349 44 LRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRR--PGR 83 (465)
Q Consensus 44 mkIaIIG-aGamGsalA~~La~~~G~~~~~~~V~l~~r--~~~ 83 (465)
|||+|+| +|.+|++++..|+.. |.. .++.++++ +++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~-~~~---~el~L~Di~~~~~ 39 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALR-DIA---DEVVFVDIPDKED 39 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCC---SEEEEECCGGGHH
T ss_pred CEEEEECCCChHHHHHHHHHHhC-CCC---CEEEEEcCCCChh
Confidence 7999999 999999999999887 621 36999998 554
No 209
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.31 E-value=0.0007 Score=67.41 Aligned_cols=96 Identities=17% Similarity=0.102 Sum_probs=62.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~-V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
++||+|||+|.||..++..+... +. .+.+ |.+++++++.+++. .+. +
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~-~~--~~~~l~av~d~~~~~a~~~---------a~~------------~-------- 49 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTL-PR--SEHQVVAVAARDLSRAKEF---------AQK------------H-------- 49 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTS-CT--TTEEEEEEECSSHHHHHHH---------HHH------------H--------
T ss_pred ccEEEEECchHHHHHHHHHHHhC-CC--CCeEEEEEEcCCHHHHHHH---------HHH------------c--------
Confidence 57999999999999999888654 20 0123 55788887644321 000 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCe-EEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeec
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~k 198 (465)
++ .+.+|.++.+. +.|+|++|+|+....+++..... . +.. |.+-|
T Consensus 50 -------------------------~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~---~---Gkh-Vl~EK 97 (334)
T 3ohs_X 50 -------------------------DIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLA---A---GKA-VLCEK 97 (334)
T ss_dssp -------------------------TCSCEESSHHHHHHCTTCCEEEECCCGGGHHHHHHHHHH---T---TCE-EEEES
T ss_pred -------------------------CCCcccCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHh---c---CCE-EEEEC
Confidence 01 24678888776 58999999999887776665443 2 333 34677
Q ss_pred cccc
Q 012349 199 GVEA 202 (465)
Q Consensus 199 Gi~~ 202 (465)
-+..
T Consensus 98 P~a~ 101 (334)
T 3ohs_X 98 PMGV 101 (334)
T ss_dssp SSSS
T ss_pred CCCC
Confidence 6543
No 210
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.29 E-value=0.00085 Score=67.74 Aligned_cols=96 Identities=16% Similarity=0.064 Sum_probs=62.7
Q ss_pred CCceEEEECccHHHHH-HHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 42 ~~mkIaIIGaGamGsa-lA~~La~~~G~~~~~~~V~-l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
+++||+|||+|.||.. ++..|.+..+ .+|. +++++++.++... + .++
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~~~~-----~~l~av~d~~~~~~~~~a---------~-------------~~~---- 52 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQMQD-----IRIVAACDSDLERARRVH---------R-------------FIS---- 52 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTCTT-----EEEEEEECSSHHHHGGGG---------G-------------TSC----
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCC-----cEEEEEEcCCHHHHHHHH---------H-------------hcC----
Confidence 3579999999999984 7888865412 5654 8888876543210 0 010
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEee
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~ 197 (465)
...+.+|+++.+. +.|+|++|+|+....+++..... . +..| .+-
T Consensus 53 ---------------------------~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~---a---GkhV-l~E 98 (359)
T 3m2t_A 53 ---------------------------DIPVLDNVPAMLNQVPLDAVVMAGPPQLHFEMGLLAMS---K---GVNV-FVE 98 (359)
T ss_dssp ---------------------------SCCEESSHHHHHHHSCCSEEEECSCHHHHHHHHHHHHH---T---TCEE-EEC
T ss_pred ---------------------------CCcccCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHH---C---CCeE-EEE
Confidence 1335678888776 45999999999887777665443 3 3333 466
Q ss_pred ccccc
Q 012349 198 KGVEA 202 (465)
Q Consensus 198 kGi~~ 202 (465)
|-+..
T Consensus 99 KPla~ 103 (359)
T 3m2t_A 99 KPPCA 103 (359)
T ss_dssp SCSCS
T ss_pred CCCcC
Confidence 66544
No 211
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.29 E-value=0.00091 Score=67.51 Aligned_cols=93 Identities=17% Similarity=0.211 Sum_probs=61.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V-~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
++||+|||+|.||...+..+.+. . +.+| -+++++++..+. .+. .
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~-~----~~~l~av~d~~~~~~~~---------a~~---------------~------ 49 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAA-D----NLEVHGVFDILAEKREA---------AAQ---------------K------ 49 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTS-T----TEEEEEEECSSHHHHHH---------HHT---------------T------
T ss_pred cCcEEEECcCHHHHHHHHHHHhC-C----CcEEEEEEcCCHHHHHH---------HHh---------------c------
Confidence 57999999999999999888765 2 2555 477887653321 000 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecc
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kG 199 (465)
++.+.+|.++.+. +.|+|++|+|+....+++..... . +..| .+-|-
T Consensus 50 -------------------------g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~---a---GkhV-l~EKP 97 (359)
T 3e18_A 50 -------------------------GLKIYESYEAVLADEKVDAVLIATPNDSHKELAISALE---A---GKHV-VCEKP 97 (359)
T ss_dssp -------------------------TCCBCSCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHH---T---TCEE-EEESS
T ss_pred -------------------------CCceeCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHH---C---CCCE-EeeCC
Confidence 1234577888776 68999999999887777665443 2 3334 36666
Q ss_pred ccc
Q 012349 200 VEA 202 (465)
Q Consensus 200 i~~ 202 (465)
+..
T Consensus 98 ~a~ 100 (359)
T 3e18_A 98 VTM 100 (359)
T ss_dssp CCS
T ss_pred CcC
Confidence 543
No 212
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.28 E-value=0.0011 Score=66.75 Aligned_cols=98 Identities=13% Similarity=0.096 Sum_probs=63.1
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~-V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
+++||+|||+|.||..++..|... . +.+ |.+++++++..+.. .+..+ ++
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~-~----~~~lv~v~d~~~~~~~~~--------a~~~~------------~~----- 54 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLA-P----NATISGVASRSLEKAKAF--------ATANN------------YP----- 54 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHC-T----TEEEEEEECSSHHHHHHH--------HHHTT------------CC-----
T ss_pred CceEEEEECchHHHHHHHHHHhhC-C----CcEEEEEEcCCHHHHHHH--------HHHhC------------CC-----
Confidence 468999999999999999988765 2 145 45788887543321 00000 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeec
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~k 198 (465)
....+.+|.++.+. +.|+|++|+|+....+++.... .. +..|+ +-|
T Consensus 55 -------------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al---~a---Gk~V~-~EK 102 (362)
T 1ydw_A 55 -------------------------ESTKIHGSYESLLEDPEIDALYVPLPTSLHVEWAIKAA---EK---GKHIL-LEK 102 (362)
T ss_dssp -------------------------TTCEEESSHHHHHHCTTCCEEEECCCGGGHHHHHHHHH---TT---TCEEE-ECS
T ss_pred -------------------------CCCeeeCCHHHHhcCCCCCEEEEcCChHHHHHHHHHHH---HC---CCeEE-Eec
Confidence 01345678888775 5899999999998877766543 33 34444 466
Q ss_pred ccc
Q 012349 199 GVE 201 (465)
Q Consensus 199 Gi~ 201 (465)
-+.
T Consensus 103 P~a 105 (362)
T 1ydw_A 103 PVA 105 (362)
T ss_dssp SCS
T ss_pred CCc
Confidence 443
No 213
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.27 E-value=0.00055 Score=66.27 Aligned_cols=36 Identities=28% Similarity=0.256 Sum_probs=32.1
Q ss_pred eEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhh
Q 012349 45 RIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVD 86 (465)
Q Consensus 45 kIaIIGaGamGsalA~~La~~~G~~~~~~-~V~l~~r~~~~~~ 86 (465)
+|+|||+|.||.+++..|++. | . +|++++|+.++++
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~-G-----~~~I~v~nR~~~ka~ 146 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM-G-----VKDIWVVNRTIERAK 146 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-T-----CCCEEEEESCHHHHH
T ss_pred eEEEECcHHHHHHHHHHHHHc-C-----CCEEEEEeCCHHHHH
Confidence 899999999999999999988 7 5 8999999976544
No 214
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=97.25 E-value=0.00061 Score=64.32 Aligned_cols=99 Identities=14% Similarity=0.239 Sum_probs=66.3
Q ss_pred hhHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHH--HhcCCCCCCee-EEEEecCch-hhhhhhhhhhHHHHhc
Q 012349 24 SLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQ--DSYGYLRDKVL-IRIWRRPGR-SVDRATAEHLFEVINS 99 (465)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La--~~~G~~~~~~~-V~l~~r~~~-~~~~i~~~~l~~~i~~ 99 (465)
..++-+++++..+|.. ...+|+|+|+|+.|.+++..+. .. | .+ |-++|.+++ .+..
T Consensus 67 ~V~~L~~~i~~~Lg~~--~~~~V~IvGaG~lG~aLa~~~~~~~~-g-----~~iVg~~D~dp~~kiG~------------ 126 (212)
T 3keo_A 67 DVKKLMNFFAEILNDH--STTNVMLVGCGNIGRALLHYRFHDRN-K-----MQISMAFDLDSNDLVGK------------ 126 (212)
T ss_dssp EHHHHHHHHHHHTTTT--SCEEEEEECCSHHHHHHTTCCCCTTS-S-----EEEEEEEECTTSTTTTC------------
T ss_pred EHHHHHHHHHHHhCCC--CCCEEEEECcCHHHHHHHHhhhcccC-C-----eEEEEEEeCCchhccCc------------
Confidence 3566678888888765 4478999999999999988742 22 3 44 556777764 3210
Q ss_pred hhhhHHhhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHH
Q 012349 100 REDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVF 177 (465)
Q Consensus 100 ~~~~~~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl 177 (465)
..+.++ ++...+++++.++ +.|.+|+|+|+....+++
T Consensus 127 ------------~~i~Gv-----------------------------pV~~~~dL~~~v~~~~Id~vIIAvPs~~aq~v~ 165 (212)
T 3keo_A 127 ------------TTEDGI-----------------------------PVYGISTINDHLIDSDIETAILTVPSTEAQEVA 165 (212)
T ss_dssp ------------BCTTCC-----------------------------BEEEGGGHHHHC-CCSCCEEEECSCGGGHHHHH
T ss_pred ------------eeECCe-----------------------------EEeCHHHHHHHHHHcCCCEEEEecCchhHHHHH
Confidence 011111 2333466766665 489999999999888888
Q ss_pred HHHHHh
Q 012349 178 EEISRY 183 (465)
Q Consensus 178 ~~l~~~ 183 (465)
+.+...
T Consensus 166 d~lv~~ 171 (212)
T 3keo_A 166 DILVKA 171 (212)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 887653
No 215
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.24 E-value=0.00055 Score=68.32 Aligned_cols=93 Identities=20% Similarity=0.243 Sum_probs=60.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (465)
+.++|+|||+|.+|...+..|....+ ..+|.+|+|+ +.++ +.+.+... + ++
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~----~~~V~v~~r~--~a~~-----la~~l~~~-------------~-g~---- 170 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFA----LEAILVHDPY--ASPE-----ILERIGRR-------------C-GV---- 170 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSC----CCEEEEECTT--CCHH-----HHHHHHHH-------------H-TS----
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCC----CcEEEEECCc--HHHH-----HHHHHHHh-------------c-CC----
Confidence 45799999999999999999986412 1689999999 3332 22112110 0 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEe
Q 012349 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISL 196 (465)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~ 196 (465)
.+.+. ++++++.++|+||.|||+.. .++. ..++++ +++|+.+
T Consensus 171 -------------------------~~~~~-~~~eav~~aDIVi~aT~s~~--pvl~--~~~l~~---G~~V~~v 212 (313)
T 3hdj_A 171 -------------------------PARMA-APADIAAQADIVVTATRSTT--PLFA--GQALRA---GAFVGAI 212 (313)
T ss_dssp -------------------------CEEEC-CHHHHHHHCSEEEECCCCSS--CSSC--GGGCCT---TCEEEEC
T ss_pred -------------------------eEEEe-CHHHHHhhCCEEEEccCCCC--cccC--HHHcCC---CcEEEEC
Confidence 24455 89999999999999999852 2222 234555 5655444
No 216
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.22 E-value=0.0011 Score=65.54 Aligned_cols=66 Identities=18% Similarity=0.110 Sum_probs=48.8
Q ss_pred CCCeeEeecchhHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhh
Q 012349 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVD 86 (465)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~-~V~l~~r~~~~~~ 86 (465)
.+|-+..+|-...--+.-|+.. +......++|+|||+|.+|.+++..|++. | . +|++|+|+.++++
T Consensus 113 ~~g~l~g~nTd~~G~~~~l~~~-~~~~l~~~~vlVlGaGg~g~aia~~L~~~-G-----~~~V~v~nR~~~ka~ 179 (297)
T 2egg_A 113 NDGRLVGYNTDGLGYVQALEEE-MNITLDGKRILVIGAGGGARGIYFSLLST-A-----AERIDMANRTVEKAE 179 (297)
T ss_dssp ETTEEEEECCHHHHHHHHHHHH-TTCCCTTCEEEEECCSHHHHHHHHHHHTT-T-----CSEEEEECSSHHHHH
T ss_pred cCCeEeeccCCHHHHHHHHHHh-CCCCCCCCEEEEECcHHHHHHHHHHHHHC-C-----CCEEEEEeCCHHHHH
Confidence 5676777777666555555543 20122347899999999999999999988 7 5 8999999986554
No 217
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.22 E-value=0.0016 Score=64.99 Aligned_cols=96 Identities=16% Similarity=0.128 Sum_probs=61.6
Q ss_pred CCceEEEECccHHHHH-HHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 42 ~~mkIaIIGaGamGsa-lA~~La~~~G~~~~~~~V~-l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
.|+||+|||+|.||.. ++..+... . +.+|. +++++++.+++. .+. |
T Consensus 22 ~mirigiIG~G~ig~~~~~~~~~~~-~----~~~lvav~d~~~~~a~~~---------a~~------------~------ 69 (350)
T 4had_A 22 SMLRFGIISTAKIGRDNVVPAIQDA-E----NCVVTAIASRDLTRAREM---------ADR------------F------ 69 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHC-S----SEEEEEEECSSHHHHHHH---------HHH------------H------
T ss_pred CccEEEEEcChHHHHHHHHHHHHhC-C----CeEEEEEECCCHHHHHHH---------HHH------------c------
Confidence 5689999999999975 45566554 2 14544 788887654431 100 0
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEee
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~ 197 (465)
+ -..+.+|.++.+. +.|+|++|||+....+++..... . +.. |.+-
T Consensus 70 --g------------------------~~~~y~d~~ell~~~~iDaV~I~tP~~~H~~~~~~al~---a---Gkh-Vl~E 116 (350)
T 4had_A 70 --S------------------------VPHAFGSYEEMLASDVIDAVYIPLPTSQHIEWSIKAAD---A---GKH-VVCE 116 (350)
T ss_dssp --T------------------------CSEEESSHHHHHHCSSCSEEEECSCGGGHHHHHHHHHH---T---TCE-EEEC
T ss_pred --C------------------------CCeeeCCHHHHhcCCCCCEEEEeCCCchhHHHHHHHHh---c---CCE-EEEe
Confidence 0 0135678888774 47999999999887777666543 2 233 3477
Q ss_pred ccccc
Q 012349 198 KGVEA 202 (465)
Q Consensus 198 kGi~~ 202 (465)
|-+..
T Consensus 117 KPla~ 121 (350)
T 4had_A 117 KPLAL 121 (350)
T ss_dssp SCCCS
T ss_pred CCccc
Confidence 77654
No 218
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=97.20 E-value=0.00064 Score=64.12 Aligned_cols=97 Identities=16% Similarity=0.158 Sum_probs=64.3
Q ss_pred hHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhhHHHHhchhhh
Q 012349 25 LEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDV 103 (465)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~-V~l~~r~~~~~~~i~~~~l~~~i~~~~~~ 103 (465)
+++-++++++.++.. +.+||+|||+|.+|.+++..+....| .+ |-++|.+++....
T Consensus 64 v~~L~~~~~~~lg~~--~~~rV~IIGaG~~G~~la~~~~~~~g-----~~iVg~~D~dp~k~g~---------------- 120 (211)
T 2dt5_A 64 VPVLKRELRHILGLN--RKWGLCIVGMGRLGSALADYPGFGES-----FELRGFFDVDPEKVGR---------------- 120 (211)
T ss_dssp HHHHHHHHHHHHTTT--SCEEEEEECCSHHHHHHHHCSCCCSS-----EEEEEEEESCTTTTTC----------------
T ss_pred hHHHHHHHHHHhCcC--CCCEEEEECccHHHHHHHHhHhhcCC-----cEEEEEEeCCHHHHhh----------------
Confidence 455567777777764 34799999999999999885322102 44 5577777653221
Q ss_pred HHhhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc-CCCEEEEecCcchHHHHHHHHHH
Q 012349 104 LRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW-DADIVINGLPSTETKEVFEEISR 182 (465)
Q Consensus 104 ~~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~-~aDiVIlaVps~~l~~vl~~l~~ 182 (465)
...++ ++...+++++.++ +.|.|++|+|+....++.+.+..
T Consensus 121 ---------~i~gv-----------------------------~V~~~~dl~ell~~~ID~ViIA~Ps~~~~ei~~~l~~ 162 (211)
T 2dt5_A 121 ---------PVRGG-----------------------------VIEHVDLLPQRVPGRIEIALLTVPREAAQKAADLLVA 162 (211)
T ss_dssp ---------EETTE-----------------------------EEEEGGGHHHHSTTTCCEEEECSCHHHHHHHHHHHHH
T ss_pred ---------hhcCC-----------------------------eeecHHhHHHHHHcCCCEEEEeCCchhHHHHHHHHHH
Confidence 11111 2334567777665 58999999999988887777754
No 219
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.16 E-value=0.0021 Score=66.79 Aligned_cols=206 Identities=19% Similarity=0.176 Sum_probs=116.7
Q ss_pred hhHHHhHHHhh--hhcCCCC-------CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhH
Q 012349 24 SLEERLDELRR--LMGKAEG-------DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLF 94 (465)
Q Consensus 24 ~~~~~~~~~~~--~~~~~~~-------~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~ 94 (465)
++.+.|++|.+ .|.+.+- +-+||+|||.|+-|.+-|.-|-++ | .+|++--|.....+.
T Consensus 9 ~~~~~~~~~~~c~~m~~~eF~~~~~~lkgK~IaVIGyGsQG~AqAlNLRDS-G-----v~V~Vglr~~s~~e~------- 75 (491)
T 3ulk_A 9 NLRQQLAQLGKCRFMGRDEFADGASYLQGKKVVIVGCGAQGLNQGLNMRDS-G-----LDISYALRKEAIAEK------- 75 (491)
T ss_dssp CHHHHHHHHTCCEECCGGGGTTTTGGGTTSEEEEESCSHHHHHHHHHHHHT-T-----CEEEEEECHHHHHTT-------
T ss_pred cHHHHHHHhccceeccHHHhcchhHHHcCCEEEEeCCChHhHHHHhHHHhc-C-----CcEEEEeCCCCcccc-------
Confidence 46677877743 2322211 127999999999999999999999 8 788776664321110
Q ss_pred HHHhchhhhHHhhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHH
Q 012349 95 EVINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETK 174 (465)
Q Consensus 95 ~~i~~~~~~~~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~ 174 (465)
. ..+-... .+ +..+ .+..+|++.||+|++.+|.....
T Consensus 76 ------~---------~S~~~A~---------------~~------------Gf~v-~~~~eA~~~ADvV~~L~PD~~q~ 112 (491)
T 3ulk_A 76 ------R---------ASWRKAT---------------EN------------GFKV-GTYEELIPQADLVINLTPDKQHS 112 (491)
T ss_dssp ------C---------HHHHHHH---------------HT------------TCEE-EEHHHHGGGCSEEEECSCGGGHH
T ss_pred ------c---------chHHHHH---------------HC------------CCEe-cCHHHHHHhCCEEEEeCChhhHH
Confidence 0 0000000 11 2333 34678999999999999999999
Q ss_pred HHHHHHHHhhhccCCCCEEEEeeccccccccccccCCCHHHHHHhHhCCCCccE--EEEeCCchhh--h--hhccCceEE
Q 012349 175 EVFEEISRYWKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENI--LYLGGPNIAS--E--IYNKEYANA 248 (465)
Q Consensus 175 ~vl~~l~~~l~~~~~~~ivIs~~kGi~~~~~~~~~~~~~se~I~e~lg~~~~~i--~vlsGP~~a~--e--v~~g~~t~~ 248 (465)
++.++|.|++++ +.. +..+-|+.... ....+.....+ +.=-||++.. + -+.|.|+.+
T Consensus 113 ~vy~~I~p~lk~---G~~-L~faHGFnI~~-------------~~i~pp~dvdVimVAPKgpG~~VR~~y~~G~GvP~li 175 (491)
T 3ulk_A 113 DVVRTVQPLMKD---GAA-LGYSHGFNIVE-------------VGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLI 175 (491)
T ss_dssp HHHHHHGGGSCT---TCE-EEESSCHHHHT-------------TCCCCCTTSEEEEEEESSCHHHHHHHHHTTCCCCEEE
T ss_pred HHHHHHHhhCCC---CCE-EEecCcccccc-------------cccccCCCcceEEeCCCCCcHHHHHHHHcCCCCceEE
Confidence 999999999997 453 45777875320 11111111222 2225666643 2 234557766
Q ss_pred EEe--CCh-----hHHHHHHHHHcC--C-----CCeEEecCChHHHH--HHHHHHHHHHHHHHhhhcccC
Q 012349 249 RIC--GAE-----KWRKPLAKFLRR--P-----HFTVWDNGDLVTHE--VMGGLKNVYAIGAGMVAALTN 302 (465)
Q Consensus 249 ~~~--~~~-----~~~~~l~~ll~~--~-----g~~v~~s~Di~gve--~~galKNviAia~Gi~~gl~~ 302 (465)
.+- .|. +.+..++...-. . .|+-.+.+|+.|-+ |||.+.-.+-.+.-.+-..+|
T Consensus 176 AVhqeqD~sG~a~~~AlayA~aiG~~raGvieTTF~eEtetDLfGEQaVLcGgl~~li~agFetLveaGy 245 (491)
T 3ulk_A 176 AVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCFDKLVEEGT 245 (491)
T ss_dssp EECGGGCTTSCHHHHHHHHHHHHTGGGTCEEECCHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHTTC
T ss_pred EEEeCCCCchhHHHHHHHHHHhcCCCcCceeeccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 552 221 233334444332 1 23444567888854 577655544333333444444
No 220
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.16 E-value=0.0024 Score=63.69 Aligned_cols=36 Identities=14% Similarity=0.327 Sum_probs=29.6
Q ss_pred ceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 44 LRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 44 mkIaIIG-aGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
|||+||| +|.+|.+++..|+.+.+ + ..++.++++++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~-~--~~el~L~Di~~ 37 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLP-S--GSELSLYDIAP 37 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSC-T--TEEEEEECSST
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-C--CceEEEEecCC
Confidence 7999999 89999999999987511 1 16899999986
No 221
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.15 E-value=0.0028 Score=62.33 Aligned_cols=94 Identities=17% Similarity=0.174 Sum_probs=66.2
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 42 ~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
+.+||+|+|+ |.||...+..+.+. | .+ .++..++..... ..
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~-g-----~~-~V~~V~p~~~g~-------------------------~~------ 47 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAY-G-----TK-MVGGVTPGKGGT-------------------------TH------ 47 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH-T-----CE-EEEEECTTCTTC-------------------------EE------
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-C-----Ce-EEEEeCCCcccc-------------------------ee------
Confidence 4579999998 99999999999887 6 55 345555421100 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeec
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~k 198 (465)
.++.+..+++++.+ ++|+++++||+....+++++.... . -..+|.++.
T Consensus 48 -------------------------~G~~vy~sl~el~~~~~~D~viI~tP~~~~~~~~~ea~~~-G----i~~iVi~t~ 97 (288)
T 2nu8_A 48 -------------------------LGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDA-G----IKLIITITE 97 (288)
T ss_dssp -------------------------TTEEEESSHHHHHHHHCCCEEEECCCGGGHHHHHHHHHHT-T----CSEEEECCC
T ss_pred -------------------------CCeeccCCHHHHhhcCCCCEEEEecCHHHHHHHHHHHHHC-C----CCEEEEECC
Confidence 03445677888777 899999999999999998887653 1 234566788
Q ss_pred ccccc
Q 012349 199 GVEAE 203 (465)
Q Consensus 199 Gi~~~ 203 (465)
|+..+
T Consensus 98 G~~~~ 102 (288)
T 2nu8_A 98 GIPTL 102 (288)
T ss_dssp CCCHH
T ss_pred CCCHH
Confidence 88654
No 222
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.11 E-value=0.0029 Score=62.16 Aligned_cols=65 Identities=17% Similarity=0.164 Sum_probs=47.0
Q ss_pred CCeeEeecchhHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhhh
Q 012349 15 NGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDR 87 (465)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~-~V~l~~r~~~~~~~ 87 (465)
+|-++-.|-.-.--+.-|++... ....+++.|+|+|.+|.+++..|++. | . +|++++|+.+++++
T Consensus 101 ~g~l~G~NTD~~G~~~~l~~~~~--~l~~k~vlVlGaGG~g~aia~~L~~~-G-----~~~v~i~~R~~~~a~~ 166 (283)
T 3jyo_A 101 TGHTTGHNTDVSGFGRGMEEGLP--NAKLDSVVQVGAGGVGNAVAYALVTH-G-----VQKLQVADLDTSRAQA 166 (283)
T ss_dssp TSCEEEECHHHHHHHHHHHHHCT--TCCCSEEEEECCSHHHHHHHHHHHHT-T-----CSEEEEECSSHHHHHH
T ss_pred CCeEEEecCCHHHHHHHHHHhCc--CcCCCEEEEECCcHHHHHHHHHHHHC-C-----CCEEEEEECCHHHHHH
Confidence 56666667555444444544321 22447899999999999999999988 7 5 79999999876553
No 223
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.11 E-value=0.0014 Score=65.44 Aligned_cols=42 Identities=7% Similarity=0.107 Sum_probs=34.0
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (465)
+.++|+|||+|.+|..++..|....+ ..+|.+|+|+++++++
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~----~~~V~v~~r~~~~a~~ 165 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFD----IGEVKAYDVREKAAKK 165 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSC----CCEEEEECSSHHHHHH
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCC----ccEEEEECCCHHHHHH
Confidence 45799999999999999999987412 1689999999876553
No 224
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.11 E-value=0.0021 Score=64.82 Aligned_cols=93 Identities=13% Similarity=0.139 Sum_probs=60.7
Q ss_pred CCceEEEECccHHHHH-HHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 42 ~~mkIaIIGaGamGsa-lA~~La~~~G~~~~~~~V-~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
+++||+|||+|.||.. .+..+....+ .+| -+++++++.+.+ .++
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~-----~~l~av~d~~~~~~~~-------------------------~~~---- 49 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNPH-----FELYKIVERSKELSKE-------------------------RYP---- 49 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCTT-----EEEEEEECSSCCGGGT-------------------------TCT----
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCCC-----eEEEEEEcCCHHHHHH-------------------------hCC----
Confidence 4579999999999997 5666655412 554 477887653210 011
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC--CCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEee
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~--aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~ 197 (465)
...+.+|.++.+.+ .|+|++|+|+....+++..... . +..| .+-
T Consensus 50 ---------------------------~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~---a---GkhV-l~E 95 (362)
T 3fhl_A 50 ---------------------------QASIVRSFKELTEDPEIDLIVVNTPDNTHYEYAGMALE---A---GKNV-VVE 95 (362)
T ss_dssp ---------------------------TSEEESCSHHHHTCTTCCEEEECSCGGGHHHHHHHHHH---T---TCEE-EEE
T ss_pred ---------------------------CCceECCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHH---C---CCeE-EEe
Confidence 23456788888766 8999999999877776665443 2 3333 466
Q ss_pred ccccc
Q 012349 198 KGVEA 202 (465)
Q Consensus 198 kGi~~ 202 (465)
|-+..
T Consensus 96 KP~a~ 100 (362)
T 3fhl_A 96 KPFTS 100 (362)
T ss_dssp SSCCS
T ss_pred cCCCC
Confidence 66544
No 225
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.10 E-value=0.0015 Score=66.54 Aligned_cols=80 Identities=18% Similarity=0.169 Sum_probs=55.5
Q ss_pred CceEEEECcc-HHHHHHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 43 PLRIVGVGAG-AWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 43 ~mkIaIIGaG-amGsalA~~La~~~G~~~~~~~-V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
++||+|||+| .||..++..+.+. . +.+ |-+++++++.+++. .+. |
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~-~----~~~l~av~d~~~~~~~~~---------a~~------------~------- 48 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHH-P----DAQIVAACDPNEDVRERF---------GKE------------Y------- 48 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHC-T----TEEEEEEECSCHHHHHHH---------HHH------------H-------
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhC-C----CeEEEEEEeCCHHHHHHH---------HHH------------c-------
Confidence 5899999999 9999999988765 2 144 44788887644321 000 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHH
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~ 181 (465)
++.+.+|.++.+. +.|+|++++|+....+++....
T Consensus 49 --------------------------g~~~~~~~~ell~~~~vD~V~i~tp~~~H~~~~~~al 85 (387)
T 3moi_A 49 --------------------------GIPVFATLAEMMQHVQMDAVYIASPHQFHCEHVVQAS 85 (387)
T ss_dssp --------------------------TCCEESSHHHHHHHSCCSEEEECSCGGGHHHHHHHHH
T ss_pred --------------------------CCCeECCHHHHHcCCCCCEEEEcCCcHHHHHHHHHHH
Confidence 1234678888775 4899999999987777666544
No 226
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.09 E-value=0.0016 Score=63.76 Aligned_cols=150 Identities=19% Similarity=0.130 Sum_probs=85.8
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 42 ~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~-l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
++|||+|+|+ |.||..++..+....| +++. +++++++.... . ....+-++
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~-----~elva~~d~~~~~~~g-----------~----------d~~~~~g~-- 55 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEG-----VQLGAALEREGSSLLG-----------S----------DAGELAGA-- 55 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTT-----EECCCEECCTTCTTCS-----------C----------CTTCSSSS--
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCC-----CEEEEEEecCchhhhh-----------h----------hHHHHcCC--
Confidence 3589999998 9999999998875523 6766 66766532100 0 00000010
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecc
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kG 199 (465)
+. ..+.+++|+++++.++|+||-++++....+.+.... .. +..+|+-+-|
T Consensus 56 --~~----------------------~~v~~~~dl~~~l~~~DvVIDft~p~~~~~~~~~a~---~~---G~~vVigTtG 105 (273)
T 1dih_A 56 --GK----------------------TGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCR---QH---GKGMVIGTTG 105 (273)
T ss_dssp --SC----------------------CSCCEESCSTTTTTSCSEEEECSCHHHHHHHHHHHH---HT---TCEEEECCCC
T ss_pred --Cc----------------------CCceecCCHHHHhcCCCEEEEcCChHHHHHHHHHHH---hC---CCCEEEECCC
Confidence 00 134457788887888999996776665555555443 33 4456665558
Q ss_pred ccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEe
Q 012349 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWD 273 (465)
Q Consensus 200 i~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~ 273 (465)
+..+. .+.+.+.-. ...++..||+...+.. -.+.++...+.|. .++.+.+
T Consensus 106 ~~~e~---------~~~L~~~a~----~~~vv~a~N~siGvn~----------~~~l~~~aa~~~~-~~~diei 155 (273)
T 1dih_A 106 FDEAG---------KQAIRDAAA----DIAIVFAANFSVGVNV----------MLKLLEKAAKVMG-DYTDIEI 155 (273)
T ss_dssp CCHHH---------HHHHHHHTT----TSCEEECSCCCHHHHH----------HHHHHHHHHHHHT-TTSEEEE
T ss_pred CCHHH---------HHHHHHhcC----CCCEEEEecCcHHHHH----------HHHHHHHHHHhcC-CCCCEEE
Confidence 76541 133444322 1246778888764331 0234566777775 3555554
No 227
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.08 E-value=0.0015 Score=65.39 Aligned_cols=48 Identities=13% Similarity=0.130 Sum_probs=32.7
Q ss_pred eEEecCHHHHhcC--CCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccccc
Q 012349 148 LKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (465)
Q Consensus 148 i~~t~dl~eal~~--aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~ 202 (465)
+.+.+|+++.+.+ .|+|++|+|+....+++.... .. +..| .+-|-+..
T Consensus 51 ~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al---~a---Gk~V-l~EKP~a~ 100 (345)
T 3f4l_A 51 IHFTSDLDEVLNDPDVKLVVVCTHADSHFEYAKRAL---EA---GKNV-LVEKPFTP 100 (345)
T ss_dssp CEEESCTHHHHTCTTEEEEEECSCGGGHHHHHHHHH---HT---TCEE-EECSSSCS
T ss_pred CceECCHHHHhcCCCCCEEEEcCChHHHHHHHHHHH---Hc---CCcE-EEeCCCCC
Confidence 4567888888765 899999999987777666543 33 3334 46675543
No 228
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.06 E-value=0.0027 Score=64.16 Aligned_cols=93 Identities=18% Similarity=0.251 Sum_probs=60.1
Q ss_pred CCceEEEECccHHHHH-HHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 42 ~~mkIaIIGaGamGsa-lA~~La~~~G~~~~~~~V-~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
+++||+|||+|.||.. .+..+.+..+ .+| -+++++++.+.+ ..+
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~~~-----~~l~av~d~~~~~~~~-------------------------~~~---- 51 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSVPG-----LNLAFVASRDEEKVKR-------------------------DLP---- 51 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTSTT-----EEEEEEECSCHHHHHH-------------------------HCT----
T ss_pred CcceEEEECCCHHHHHHHHHHHhhCCC-----eEEEEEEcCCHHHHHh-------------------------hCC----
Confidence 4589999999999986 5666654312 555 477887643210 011
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEee
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~ 197 (465)
...+.+|.++.+. +.|+|++|+|+....+++.... .. +..| .+-
T Consensus 52 ---------------------------~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~~~~~~al---~a---Gk~V-l~E 97 (364)
T 3e82_A 52 ---------------------------DVTVIASPEAAVQHPDVDLVVIASPNATHAPLARLAL---NA---GKHV-VVD 97 (364)
T ss_dssp ---------------------------TSEEESCHHHHHTCTTCSEEEECSCGGGHHHHHHHHH---HT---TCEE-EEC
T ss_pred ---------------------------CCcEECCHHHHhcCCCCCEEEEeCChHHHHHHHHHHH---HC---CCcE-EEe
Confidence 2346688888877 6899999999987777665543 33 3344 467
Q ss_pred ccccc
Q 012349 198 KGVEA 202 (465)
Q Consensus 198 kGi~~ 202 (465)
|-+..
T Consensus 98 KPla~ 102 (364)
T 3e82_A 98 KPFTL 102 (364)
T ss_dssp SCSCS
T ss_pred CCCcC
Confidence 75543
No 229
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.05 E-value=0.0024 Score=66.16 Aligned_cols=22 Identities=27% Similarity=0.305 Sum_probs=19.1
Q ss_pred CeEEecCHHHHhcCCCEEEEec
Q 012349 147 PLKVVTNLQEAVWDADIVINGL 168 (465)
Q Consensus 147 ~i~~t~dl~eal~~aDiVIlaV 168 (465)
.+..++|..+++++||+||++.
T Consensus 60 ~v~~t~d~~~al~~AD~Viita 81 (417)
T 1up7_A 60 KVLISDTFEGAVVDAKYVIFQF 81 (417)
T ss_dssp EEEECSSHHHHHTTCSEEEECC
T ss_pred EEEEeCCHHHHhCCCCEEEEcC
Confidence 4667789888899999999998
No 230
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.05 E-value=0.002 Score=62.01 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=30.8
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
++|+|||+|.+|+.++..|++. |. .++++++++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~-Gv----~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA-GV----GNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TC----SEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHc-CC----CeEEEEcCCC
Confidence 6899999999999999999999 82 4899999986
No 231
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.04 E-value=0.0029 Score=63.39 Aligned_cols=93 Identities=12% Similarity=0.131 Sum_probs=60.4
Q ss_pred CCceEEEECccHHHHH-HHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 42 ~~mkIaIIGaGamGsa-lA~~La~~~G~~~~~~~V-~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
+++||+|||+|.||.. .+..+.+. . +.+| -+++++++.+++ ..+
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~~~~~-~----~~~l~av~d~~~~~~~~-------------------------~~~---- 51 (352)
T 3kux_A 6 DKIKVGLLGYGYASKTFHAPLIMGT-P----GLELAGVSSSDASKVHA-------------------------DWP---- 51 (352)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTS-T----TEEEEEEECSCHHHHHT-------------------------TCS----
T ss_pred CCceEEEECCCHHHHHHHHHHHhhC-C----CcEEEEEECCCHHHHHh-------------------------hCC----
Confidence 4589999999999996 66666654 2 2554 477887653210 011
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC--CCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEee
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~--aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~ 197 (465)
...+.+|+++.+.+ .|+|++|+|+....+++..... . +..| .+-
T Consensus 52 ---------------------------~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~---a---GkhV-~~E 97 (352)
T 3kux_A 52 ---------------------------AIPVVSDPQMLFNDPSIDLIVIPTPNDTHFPLAQSALA---A---GKHV-VVD 97 (352)
T ss_dssp ---------------------------SCCEESCHHHHHHCSSCCEEEECSCTTTHHHHHHHHHH---T---TCEE-EEC
T ss_pred ---------------------------CCceECCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHH---C---CCcE-EEE
Confidence 23456888888765 8999999999877776665433 3 3334 356
Q ss_pred ccccc
Q 012349 198 KGVEA 202 (465)
Q Consensus 198 kGi~~ 202 (465)
|-+..
T Consensus 98 KPla~ 102 (352)
T 3kux_A 98 KPFTV 102 (352)
T ss_dssp SSCCS
T ss_pred CCCcC
Confidence 66543
No 232
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.03 E-value=0.0016 Score=65.09 Aligned_cols=87 Identities=16% Similarity=0.108 Sum_probs=57.8
Q ss_pred CceEEEECccHHHH-HHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 43 PLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 43 ~mkIaIIGaGamGs-alA~~La~~~G~~~~~~~-V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
++||+|||+|.||. ..+..+....+ .+ |-+++++++. .
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~-----~~lvav~d~~~~~------------------------------~----- 64 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNAN-----FKLVATASRHGTV------------------------------E----- 64 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTT-----EEEEEEECSSCCC------------------------------T-----
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCC-----eEEEEEEeCChhh------------------------------c-----
Confidence 57999999999998 67888876512 45 3456665421 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc---CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEee
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW---DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~---~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~ 197 (465)
++.+.+|.++.+. +.|+|++|+|+....+++..... . +..| .+-
T Consensus 65 --------------------------g~~~~~~~~~ll~~~~~vD~V~i~tp~~~H~~~~~~al~---a---GkhV-l~E 111 (330)
T 4ew6_A 65 --------------------------GVNSYTTIEAMLDAEPSIDAVSLCMPPQYRYEAAYKALV---A---GKHV-FLE 111 (330)
T ss_dssp --------------------------TSEEESSHHHHHHHCTTCCEEEECSCHHHHHHHHHHHHH---T---TCEE-EEC
T ss_pred --------------------------CCCccCCHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHH---c---CCcE-EEe
Confidence 2334577777765 48999999998877776665543 2 3344 377
Q ss_pred ccccc
Q 012349 198 KGVEA 202 (465)
Q Consensus 198 kGi~~ 202 (465)
|-+..
T Consensus 112 KP~a~ 116 (330)
T 4ew6_A 112 KPPGA 116 (330)
T ss_dssp SSSCS
T ss_pred CCCCC
Confidence 76543
No 233
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.02 E-value=0.00097 Score=65.43 Aligned_cols=65 Identities=14% Similarity=0.064 Sum_probs=45.6
Q ss_pred CCCeeEeecchhHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhh
Q 012349 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVD 86 (465)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~-~V~l~~r~~~~~~ 86 (465)
.+|-++-.|-.-.-=+.-|++.-. ....++|.|+|+|.+|.+++..|++. | . +|++++|+.++.+
T Consensus 90 ~~g~l~G~NTD~~G~~~~L~~~~~--~l~~k~vlvlGaGg~g~aia~~L~~~-G-----~~~v~v~~R~~~~a~ 155 (277)
T 3don_A 90 KDGKWIGYNTDGIGYVNGLKQIYE--GIEDAYILILGAGGASKGIANELYKI-V-----RPTLTVANRTMSRFN 155 (277)
T ss_dssp ETTEEEEECCHHHHHHHHHHHHST--TGGGCCEEEECCSHHHHHHHHHHHTT-C-----CSCCEEECSCGGGGT
T ss_pred cCCEEEEECChHHHHHHHHHHhCC--CcCCCEEEEECCcHHHHHHHHHHHHC-C-----CCEEEEEeCCHHHHH
Confidence 366666666554444444444221 12346899999999999999999988 7 5 8999999986543
No 234
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.99 E-value=0.00088 Score=70.28 Aligned_cols=40 Identities=23% Similarity=0.372 Sum_probs=35.8
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (465)
+.|||.|+|+|.+|..+|..|... | |+|++++++++.+++
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~-~-----~~v~vId~d~~~~~~ 41 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGE-N-----NDITIVDKDGDRLRE 41 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCST-T-----EEEEEEESCHHHHHH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHC-C-----CCEEEEECCHHHHHH
Confidence 459999999999999999999887 6 999999999886654
No 235
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=96.97 E-value=0.0023 Score=63.30 Aligned_cols=38 Identities=26% Similarity=0.267 Sum_probs=27.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEE-EEecCchh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRS 84 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~-l~~r~~~~ 84 (465)
+++||+|||+|.||..++..+.+..+ .++. +++++++.
T Consensus 8 ~~irv~IIG~G~iG~~~~~~l~~~~~-----~elvav~d~~~~~ 46 (304)
T 3bio_A 8 KKIRAAIVGYGNIGRYALQALREAPD-----FEIAGIVRRNPAE 46 (304)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTT-----EEEEEEECC----
T ss_pred CCCEEEEECChHHHHHHHHHHhcCCC-----CEEEEEEcCCHHH
Confidence 35899999999999999999887512 6665 78887653
No 236
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=96.96 E-value=0.004 Score=62.19 Aligned_cols=100 Identities=16% Similarity=0.085 Sum_probs=63.6
Q ss_pred CCCCCceEEEECcc-HHHHHHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccch
Q 012349 39 AEGDPLRIVGVGAG-AWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKY 116 (465)
Q Consensus 39 ~~~~~mkIaIIGaG-amGsalA~~La~~~G~~~~~~~-V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~ 116 (465)
...+++||+|||+| .||...+..+.+. + ++.+ |.+++++++.+++. .+. +.
T Consensus 14 ~~~~~irvgiIG~G~~~g~~~~~~l~~~-~---~~~~lvav~d~~~~~~~~~---------a~~-------------~~- 66 (340)
T 1zh8_A 14 KPLRKIRLGIVGCGIAARELHLPALKNL-S---HLFEITAVTSRTRSHAEEF---------AKM-------------VG- 66 (340)
T ss_dssp --CCCEEEEEECCSHHHHHTHHHHHHTT-T---TTEEEEEEECSSHHHHHHH---------HHH-------------HS-
T ss_pred CCCCceeEEEEecCHHHHHHHHHHHHhC-C---CceEEEEEEcCCHHHHHHH---------HHH-------------hC-
Confidence 34456899999999 8999988888754 1 1144 46888887654321 000 00
Q ss_pred hhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEE
Q 012349 117 VEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVII 194 (465)
Q Consensus 117 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivI 194 (465)
...+.+|.++.+. +.|+|++|+|+....+++..... . +..|
T Consensus 67 ------------------------------~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~---a---GkhV- 109 (340)
T 1zh8_A 67 ------------------------------NPAVFDSYEELLESGLVDAVDLTLPVELNLPFIEKALR---K---GVHV- 109 (340)
T ss_dssp ------------------------------SCEEESCHHHHHHSSCCSEEEECCCGGGHHHHHHHHHH---T---TCEE-
T ss_pred ------------------------------CCcccCCHHHHhcCCCCCEEEEeCCchHHHHHHHHHHH---C---CCcE-
Confidence 1145678888775 58999999999877776665433 3 3333
Q ss_pred Eeeccccc
Q 012349 195 SLAKGVEA 202 (465)
Q Consensus 195 s~~kGi~~ 202 (465)
.+-|-+..
T Consensus 110 l~EKPla~ 117 (340)
T 1zh8_A 110 ICEKPIST 117 (340)
T ss_dssp EEESSSSS
T ss_pred EEeCCCCC
Confidence 45676543
No 237
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=96.95 E-value=0.0026 Score=64.06 Aligned_cols=93 Identities=24% Similarity=0.247 Sum_probs=59.8
Q ss_pred CCceEEEECccHHHHH-HHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 42 ~~mkIaIIGaGamGsa-lA~~La~~~G~~~~~~~V-~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
+++||+|||+|.||.. .+..+.+. . +.+| -+++++++.+.+ ..+
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~-~----~~~l~av~d~~~~~~~~-------------------------~~~---- 49 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVL-D----EYQISKIMTSRTEEVKR-------------------------DFP---- 49 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTC-T----TEEEEEEECSCHHHHHH-------------------------HCT----
T ss_pred CcceEEEEccCHHHHHHHHHHHhhC-C----CeEEEEEEcCCHHHHHh-------------------------hCC----
Confidence 4589999999999986 56666543 1 2554 477777642110 011
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEee
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~ 197 (465)
...+.+|+++.+. +.|+|++|+|+....+++..... . +..|+ +-
T Consensus 50 ---------------------------~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~---a---GkhVl-~E 95 (358)
T 3gdo_A 50 ---------------------------DAEVVHELEEITNDPAIELVIVTTPSGLHYEHTMACIQ---A---GKHVV-ME 95 (358)
T ss_dssp ---------------------------TSEEESSTHHHHTCTTCCEEEECSCTTTHHHHHHHHHH---T---TCEEE-EE
T ss_pred ---------------------------CCceECCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHH---c---CCeEE-Ee
Confidence 2345678888876 68999999999877776665443 3 33443 57
Q ss_pred ccccc
Q 012349 198 KGVEA 202 (465)
Q Consensus 198 kGi~~ 202 (465)
|-+..
T Consensus 96 KPla~ 100 (358)
T 3gdo_A 96 KPMTA 100 (358)
T ss_dssp SSCCS
T ss_pred cCCcC
Confidence 76544
No 238
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.92 E-value=0.002 Score=66.86 Aligned_cols=86 Identities=10% Similarity=0.001 Sum_probs=55.6
Q ss_pred CCceEEEECccHHHH-HHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 42 DPLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 42 ~~mkIaIIGaGamGs-alA~~La~~~G~~~~~~~-V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
+++||+|||+|.||. .++..|.+. + +.+ |.+++++++..+.+ .+..+ .+.
T Consensus 82 ~~irigiIG~G~~g~~~~~~~l~~~-~----~~~lvav~d~~~~~~~~~--------a~~~g------------~~~--- 133 (433)
T 1h6d_A 82 RRFGYAIVGLGKYALNQILPGFAGC-Q----HSRIEALVSGNAEKAKIV--------AAEYG------------VDP--- 133 (433)
T ss_dssp CCEEEEEECCSHHHHHTHHHHTTTC-S----SEEEEEEECSCHHHHHHH--------HHHTT------------CCG---
T ss_pred CceEEEEECCcHHHHHHHHHHHhhC-C----CcEEEEEEcCCHHHHHHH--------HHHhC------------CCc---
Confidence 457999999999997 888888654 2 245 45888887644321 01000 000
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHH
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~ 181 (465)
..+.+.+|.++.+. +.|+|++|+|+....+++....
T Consensus 134 --------------------------~~~~~~~~~~~ll~~~~vD~V~iatp~~~h~~~~~~al 171 (433)
T 1h6d_A 134 --------------------------RKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAF 171 (433)
T ss_dssp --------------------------GGEECSSSGGGGGGCTTCCEEEECSCGGGHHHHHHHHH
T ss_pred --------------------------ccccccCCHHHHhcCCCCCEEEEcCCchhHHHHHHHHH
Confidence 01234566777665 6899999999988877776543
No 239
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=96.89 E-value=0.0021 Score=64.05 Aligned_cols=36 Identities=19% Similarity=0.371 Sum_probs=28.1
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCch
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGR 83 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~-V~l~~r~~~ 83 (465)
++||+|||+|+||..++..+.+. + +.+ |.+++++++
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~-~----~~elvav~d~~~~ 39 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQ-P----DMDLVGIFSRRAT 39 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTC-S----SEEEEEEEESSSC
T ss_pred CCEEEEEeecHHHHHHHHHHhcC-C----CCEEEEEEcCCHH
Confidence 57999999999999999988765 3 144 557887753
No 240
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.88 E-value=0.004 Score=61.86 Aligned_cols=81 Identities=10% Similarity=0.150 Sum_probs=54.3
Q ss_pred CCceEEEECccHHHH-HHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 42 DPLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 42 ~~mkIaIIGaGamGs-alA~~La~~~G~~~~~~~-V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
+++||+|||+|.+|. .++..+... + .+ |.+++++++.++.+ .+. ++
T Consensus 3 ~~~rvgiiG~G~~~~~~~~~~l~~~-~-----~~lvav~d~~~~~~~~~---------a~~-------------~~---- 50 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIYDMCQQLIDA-G-----AELAGVFESDSDNRAKF---------TSL-------------FP---- 50 (336)
T ss_dssp -CCEEEEECCSSTHHHHHHHHHHHT-T-----CEEEEEECSCTTSCHHH---------HHH-------------ST----
T ss_pred CccEEEEECCChHHHHHhhhhhcCC-C-----cEEEEEeCCCHHHHHHH---------HHh-------------cC----
Confidence 357999999999996 566666544 4 56 56899988755431 100 11
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHH
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~ 181 (465)
...+.+|.++.+. +.|+|++|+|+....+++....
T Consensus 51 ---------------------------~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al 87 (336)
T 2p2s_A 51 ---------------------------SVPFAASAEQLITDASIDLIACAVIPCDRAELALRTL 87 (336)
T ss_dssp ---------------------------TCCBCSCHHHHHTCTTCCEEEECSCGGGHHHHHHHHH
T ss_pred ---------------------------CCcccCCHHHHhhCCCCCEEEEeCChhhHHHHHHHHH
Confidence 1224567878775 5899999999987776665543
No 241
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=96.88 E-value=0.0068 Score=61.91 Aligned_cols=41 Identities=15% Similarity=0.071 Sum_probs=31.3
Q ss_pred CCceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 42 DPLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 42 ~~mkIaIIG-aGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
.++||+|+| +|.+|.+++..|+.. +.+....++.|++.+.+
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~-~l~~e~~~l~L~d~d~~ 72 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASG-EVFGQDQPIALKLLGSE 72 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHT-TTTCTTCCEEEEEECCG
T ss_pred CCCEEEEECCCChHHHHHHHHHHcC-CcCCCCceeEEEecCcc
Confidence 458999999 799999999999987 65532234777766544
No 242
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.87 E-value=0.0024 Score=66.10 Aligned_cols=39 Identities=21% Similarity=0.423 Sum_probs=35.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (465)
.|+|.|+|+|.+|..++..|.+. | ++|++++++++.++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~-g-----~~vvvId~d~~~v~~ 42 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS-G-----VKMVVLDHDPDHIET 42 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-C-----CCEEEEECCHHHHHH
Confidence 47899999999999999999988 7 899999999987664
No 243
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.83 E-value=0.0037 Score=61.04 Aligned_cols=65 Identities=15% Similarity=0.321 Sum_probs=49.1
Q ss_pred CCCeeEeecchhHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
.+|-++.+|-...--..-|++ .+.. ..++|.|||+|.+|.+++..|++. |. .+|++|+|+.++++
T Consensus 93 ~~g~l~g~NTD~~G~~~~l~~-~~~~--~~~~vlvlGaGgaarav~~~L~~~-G~----~~i~v~nRt~~ka~ 157 (271)
T 1npy_A 93 DNGFLRAYNTDYIAIVKLIEK-YHLN--KNAKVIVHGSGGMAKAVVAAFKNS-GF----EKLKIYARNVKTGQ 157 (271)
T ss_dssp ETTEEEEECHHHHHHHHHHHH-TTCC--TTSCEEEECSSTTHHHHHHHHHHT-TC----CCEEEECSCHHHHH
T ss_pred cCCEEEeecCCHHHHHHHHHH-hCCC--CCCEEEEECCcHHHHHHHHHHHHC-CC----CEEEEEeCCHHHHH
Confidence 477777888776666666655 2332 236899999999999999999988 71 37999999976544
No 244
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.81 E-value=0.0016 Score=68.49 Aligned_cols=51 Identities=18% Similarity=0.257 Sum_probs=33.0
Q ss_pred EeecchhHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 19 HHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
||..|.++..+ .++||+|+|+|.+|.+++..|++. + +.+|++++|+.+.++
T Consensus 11 ~~~~~~~~~~l------------~~k~VlIiGAGgiG~aia~~L~~~-~----g~~V~v~~R~~~ka~ 61 (467)
T 2axq_A 11 HHSSGHIEGRH------------MGKNVLLLGSGFVAQPVIDTLAAN-D----DINVTVACRTLANAQ 61 (467)
T ss_dssp ------------------------CEEEEEECCSTTHHHHHHHHHTS-T----TEEEEEEESSHHHHH
T ss_pred cccCCccccCC------------CCCEEEEECChHHHHHHHHHHHhC-C----CCeEEEEECCHHHHH
Confidence 55666665443 236899999999999999999976 3 278999999976544
No 245
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.79 E-value=0.0057 Score=59.36 Aligned_cols=65 Identities=17% Similarity=0.081 Sum_probs=46.7
Q ss_pred CCCeeEeecchhHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
.+|-++-.|-.-.--+.-|++. +. ....++|.|+|+|.+|.+++..|++. | .+|++|+|+.++++
T Consensus 92 ~~g~l~g~NTD~~G~~~~L~~~-~~-~~~~~~vlvlGaGg~g~a~a~~L~~~-G-----~~v~v~~R~~~~a~ 156 (272)
T 1p77_A 92 DDGKLYADNTDGIGLVTDLQRL-NW-LRPNQHVLILGAGGATKGVLLPLLQA-Q-----QNIVLANRTFSKTK 156 (272)
T ss_dssp TTSCEEEECCHHHHHHHHHHHT-TC-CCTTCEEEEECCSHHHHTTHHHHHHT-T-----CEEEEEESSHHHHH
T ss_pred cCCEEEEecCCHHHHHHHHHHh-CC-CcCCCEEEEECCcHHHHHHHHHHHHC-C-----CEEEEEECCHHHHH
Confidence 4565555555544444445542 22 22347899999999999999999998 7 89999999986554
No 246
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.76 E-value=0.0024 Score=60.03 Aligned_cols=37 Identities=14% Similarity=-0.031 Sum_probs=31.9
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
.++|.|+|+|.+|..++..|.+. | + |++++++++.++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~-g-----~-v~vid~~~~~~~ 45 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS-E-----V-FVLAEDENVRKK 45 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS-E-----E-EEEESCGGGHHH
T ss_pred CCEEEEECCChHHHHHHHHHHhC-C-----e-EEEEECCHHHHH
Confidence 46899999999999999999877 6 8 999999887554
No 247
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.73 E-value=0.0074 Score=59.16 Aligned_cols=67 Identities=19% Similarity=0.089 Sum_probs=47.2
Q ss_pred CCCeeEeecchhHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012349 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (465)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (465)
.+|-++-.|-.-.-=+.-|++. +. +...+++.|+|+|.+|.+++..|++. |. .+|++|+|+.+++++
T Consensus 99 ~~g~l~G~NTD~~G~~~~L~~~-~~-~l~~k~vlvlGaGg~g~aia~~L~~~-G~----~~v~v~~R~~~~a~~ 165 (281)
T 3o8q_A 99 DDGEILGDNTDGEGLVQDLLAQ-QV-LLKGATILLIGAGGAARGVLKPLLDQ-QP----ASITVTNRTFAKAEQ 165 (281)
T ss_dssp TTSCEEEECCHHHHHHHHHHHT-TC-CCTTCEEEEECCSHHHHHHHHHHHTT-CC----SEEEEEESSHHHHHH
T ss_pred CCCcEEEEecHHHHHHHHHHHh-CC-CccCCEEEEECchHHHHHHHHHHHhc-CC----CeEEEEECCHHHHHH
Confidence 4676666666554444445442 21 22447899999999999999999988 71 389999999875543
No 248
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=96.72 E-value=0.01 Score=61.62 Aligned_cols=87 Identities=20% Similarity=0.163 Sum_probs=56.8
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~-V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
+++||+|||+|.||...+..+....+ .+ |.+++++++.+++. .+.+.+.+ ++
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~~~-----~~lvav~d~~~~~~~~~-----a~~~~~~g------------~~----- 71 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARRDD-----VEIVAFADPDPYMVGRA-----QEILKKNG------------KK----- 71 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTT-----EEEEEEECSCHHHHHHH-----HHHHHHTT------------CC-----
T ss_pred CCceEEEEecCHHHHHHHHHHHhCCC-----cEEEEEEeCCHHHHHHH-----HHHHHhcC------------CC-----
Confidence 35799999999999998888875412 55 45888887654431 11010000 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEec----CHHHHhc--CCCEEEEecCcchHHHHHHHHH
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVT----NLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~----dl~eal~--~aDiVIlaVps~~l~~vl~~l~ 181 (465)
...+.+ |.++.+. +.|+|++|+|.....+++....
T Consensus 72 --------------------------~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~h~~~~~~al 112 (444)
T 2ixa_A 72 --------------------------PAKVFGNGNDDYKNMLKDKNIDAVFVSSPWEWHHEHGVAAM 112 (444)
T ss_dssp --------------------------CCEEECSSTTTHHHHTTCTTCCEEEECCCGGGHHHHHHHHH
T ss_pred --------------------------CCceeccCCCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHH
Confidence 123455 8888876 5899999999887766665543
No 249
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.71 E-value=0.011 Score=61.56 Aligned_cols=52 Identities=21% Similarity=0.193 Sum_probs=35.4
Q ss_pred hHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCchhhh
Q 012349 25 LEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVD 86 (465)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~-V~l~~r~~~~~~ 86 (465)
|-.+|.+..... +++||+|||+|.||..++..+.+..+ .+ |-+++++++.++
T Consensus 10 l~~~l~~r~~~~-----k~IRVGIIGaG~iG~~~~~~l~~~~~-----veLvAV~D~~~era~ 62 (446)
T 3upl_A 10 LARDLAARAETG-----KPIRIGLIGAGEMGTDIVTQVARMQG-----IEVGALSARRLPNTF 62 (446)
T ss_dssp HHHHHHHHHHTT-----CCEEEEEECCSHHHHHHHHHHTTSSS-----EEEEEEECSSTHHHH
T ss_pred HHHHHHHHHhcC-----CceEEEEECChHHHHHHHHHHhhCCC-----cEEEEEEeCCHHHHH
Confidence 445554433322 46899999999999999988765412 44 557888876554
No 250
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=96.70 E-value=0.0039 Score=64.78 Aligned_cols=106 Identities=13% Similarity=0.085 Sum_probs=69.1
Q ss_pred HHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHH
Q 012349 26 EERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLR 105 (465)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~ 105 (465)
+.-+|.+++-.+.. -.-++|+|+|.|.+|..+|..|... | .+|++|++++..... .
T Consensus 195 ~slldgi~ratg~~-L~GktVgIiG~G~IG~~vA~~Lka~-G-----a~Viv~D~~p~~a~~-----------A------ 250 (436)
T 3h9u_A 195 ESLVDGIKRATDVM-IAGKTACVCGYGDVGKGCAAALRGF-G-----ARVVVTEVDPINALQ-----------A------ 250 (436)
T ss_dssp HHHHHHHHHHHCCC-CTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHH-----------H------
T ss_pred HHHHHHHHHhcCCc-ccCCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEECCChhhhHH-----------H------
Confidence 34456666655432 2347999999999999999999877 7 789999998642211 0
Q ss_pred hhhhcccccchhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhh
Q 012349 106 RLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWK 185 (465)
Q Consensus 106 ~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~ 185 (465)
.. .+.. ..++++++..+|+|++++....+-. .+....++
T Consensus 251 --------~~------------------------------~G~~-~~sL~eal~~ADVVilt~gt~~iI~--~e~l~~MK 289 (436)
T 3h9u_A 251 --------AM------------------------------EGYQ-VLLVEDVVEEAHIFVTTTGNDDIIT--SEHFPRMR 289 (436)
T ss_dssp --------HH------------------------------TTCE-ECCHHHHTTTCSEEEECSSCSCSBC--TTTGGGCC
T ss_pred --------HH------------------------------hCCe-ecCHHHHHhhCCEEEECCCCcCccC--HHHHhhcC
Confidence 00 0122 2478899999999998776543311 12223345
Q ss_pred ccCCCCEEEEeecc
Q 012349 186 ERITVPVIISLAKG 199 (465)
Q Consensus 186 ~~~~~~ivIs~~kG 199 (465)
+ +.+++.+..|
T Consensus 290 ~---gAIVINvgRg 300 (436)
T 3h9u_A 290 D---DAIVCNIGHF 300 (436)
T ss_dssp T---TEEEEECSSS
T ss_pred C---CcEEEEeCCC
Confidence 5 6788888766
No 251
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=96.64 E-value=0.0045 Score=63.74 Aligned_cols=98 Identities=15% Similarity=0.142 Sum_probs=60.7
Q ss_pred CCceEEEECccH---HHHHHHHHHHHhcCCCCCCeeEE--EEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccch
Q 012349 42 DPLRIVGVGAGA---WGSVFTAMLQDSYGYLRDKVLIR--IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKY 116 (465)
Q Consensus 42 ~~mkIaIIGaGa---mGsalA~~La~~~G~~~~~~~V~--l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~ 116 (465)
+++||+|||+|. ||...+..+... + +.++. +++++++.+++. -++.+ .+
T Consensus 36 ~~~rvgiiG~G~~~~ig~~h~~~~~~~-~----~~~lva~v~d~~~~~a~~~--------a~~~g------------~~- 89 (417)
T 3v5n_A 36 KRIRLGMVGGGSGAFIGAVHRIAARLD-D----HYELVAGALSSTPEKAEAS--------GRELG------------LD- 89 (417)
T ss_dssp CCEEEEEESCC--CHHHHHHHHHHHHT-S----CEEEEEEECCSSHHHHHHH--------HHHHT------------CC-
T ss_pred CcceEEEEcCCCchHHHHHHHHHHhhC-C----CcEEEEEEeCCCHHHHHHH--------HHHcC------------CC-
Confidence 347999999999 999888877665 3 14554 678887654421 00000 00
Q ss_pred hhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC-------CCEEEEecCcchHHHHHHHHHHhhhccCC
Q 012349 117 VEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD-------ADIVINGLPSTETKEVFEEISRYWKERIT 189 (465)
Q Consensus 117 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~-------aDiVIlaVps~~l~~vl~~l~~~l~~~~~ 189 (465)
...+.+|.++.+.+ .|+|++|+|.....+++.... ..
T Consensus 90 ------------------------------~~~~~~~~~~ll~~~~~~~~~vD~V~I~tp~~~H~~~~~~al---~a--- 133 (417)
T 3v5n_A 90 ------------------------------PSRVYSDFKEMAIREAKLKNGIEAVAIVTPNHVHYAAAKEFL---KR--- 133 (417)
T ss_dssp ------------------------------GGGBCSCHHHHHHHHHHCTTCCSEEEECSCTTSHHHHHHHHH---TT---
T ss_pred ------------------------------cccccCCHHHHHhcccccCCCCcEEEECCCcHHHHHHHHHHH---hC---
Confidence 01245677777654 899999999987777666543 33
Q ss_pred CCEEEEeeccccc
Q 012349 190 VPVIISLAKGVEA 202 (465)
Q Consensus 190 ~~ivIs~~kGi~~ 202 (465)
+.. |.+-|-+..
T Consensus 134 Gkh-Vl~EKPla~ 145 (417)
T 3v5n_A 134 GIH-VICDKPLTS 145 (417)
T ss_dssp TCE-EEEESSSCS
T ss_pred CCe-EEEECCCcC
Confidence 333 447776544
No 252
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=96.63 E-value=0.0076 Score=60.31 Aligned_cols=48 Identities=13% Similarity=0.178 Sum_probs=32.8
Q ss_pred eEEecCHHHHhcC--CCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccccc
Q 012349 148 LKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (465)
Q Consensus 148 i~~t~dl~eal~~--aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~ 202 (465)
+.+.+|+++.+.+ .|+|++|+|+....+++..... . +..|+ +-|-+..
T Consensus 51 ~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~---a---Gk~Vl-~EKP~a~ 100 (349)
T 3i23_A 51 VNFTADLNELLTDPEIELITICTPAHTHYDLAKQAIL---A---GKSVI-VEKPFCD 100 (349)
T ss_dssp CEEESCTHHHHSCTTCCEEEECSCGGGHHHHHHHHHH---T---TCEEE-ECSCSCS
T ss_pred CeEECCHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHH---c---CCEEE-EECCCcC
Confidence 4566888888765 8999999999877776665443 2 33343 5666543
No 253
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.63 E-value=0.0024 Score=65.40 Aligned_cols=39 Identities=15% Similarity=0.147 Sum_probs=33.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (465)
..||+|||+|.+|...+..+... | .+|++|+++++..+.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~l-G-----a~V~v~D~~~~~l~~ 222 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRL-G-----AKTTGYDVRPEVAEQ 222 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHH-T-----CEEEEECSSGGGHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHH
Confidence 47999999999999999998877 7 789999999875543
No 254
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=96.61 E-value=0.007 Score=61.03 Aligned_cols=94 Identities=13% Similarity=0.083 Sum_probs=60.9
Q ss_pred CceEEEECccHHHH-HHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 43 PLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 43 ~mkIaIIGaGamGs-alA~~La~~~G~~~~~~~-V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
++||+|||+|.+|. .++..+... + .+ |-+++++++.+++. .+. ++
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~-~-----~~lvav~d~~~~~a~~~---------a~~-------------~~----- 72 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRA-G-----ARLAGFHEKDDALAAEF---------SAV-------------YA----- 72 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHT-T-----CEEEEEECSCHHHHHHH---------HHH-------------SS-----
T ss_pred CcEEEEECcCHHHHHHHHHHhhcC-C-----cEEEEEEcCCHHHHHHH---------HHH-------------cC-----
Confidence 47999999999984 566666544 4 55 56888887654421 000 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC--CCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeec
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~--aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~k 198 (465)
...+.+|.++.+.+ .|+|++|+|.....+++..... . +.. |.+-|
T Consensus 73 --------------------------~~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~---a---Gkh-Vl~EK 119 (361)
T 3u3x_A 73 --------------------------DARRIATAEEILEDENIGLIVSAAVSSERAELAIRAMQ---H---GKD-VLVDK 119 (361)
T ss_dssp --------------------------SCCEESCHHHHHTCTTCCEEEECCCHHHHHHHHHHHHH---T---TCE-EEEES
T ss_pred --------------------------CCcccCCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHH---C---CCe-EEEeC
Confidence 12356788888765 8999999999877776665443 2 333 34677
Q ss_pred cccc
Q 012349 199 GVEA 202 (465)
Q Consensus 199 Gi~~ 202 (465)
-+..
T Consensus 120 Pla~ 123 (361)
T 3u3x_A 120 PGMT 123 (361)
T ss_dssp CSCS
T ss_pred CCCC
Confidence 6644
No 255
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=96.55 E-value=0.015 Score=57.38 Aligned_cols=95 Identities=13% Similarity=0.033 Sum_probs=62.6
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 42 ~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
.|+||+|||+ |.||...+..+... + ..-|.+++++++... ..+ ..+
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~-~----~~lvav~d~~~~~~~----------~~~-------------~~~----- 48 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKEV-G----GVLVASLDPATNVGL----------VDS-------------FFP----- 48 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHHT-T----CEEEEEECSSCCCGG----------GGG-------------TCT-----
T ss_pred CceEEEEECCChHHHHHHHHHHHhC-C----CEEEEEEcCCHHHHH----------HHh-------------hCC-----
Confidence 4689999999 78999999999876 5 134668888775311 000 111
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHh----------cCCCEEEEecCcchHHHHHHHHHHhhhccCCC
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV----------WDADIVINGLPSTETKEVFEEISRYWKERITV 190 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal----------~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~ 190 (465)
...+.+|.++.+ .+.|+|++|+|+....+++..... . +
T Consensus 49 --------------------------~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~---a---G 96 (312)
T 3o9z_A 49 --------------------------EAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALR---L---G 96 (312)
T ss_dssp --------------------------TCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHH---T---T
T ss_pred --------------------------CCceeCCHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHH---C---C
Confidence 234566777655 568999999999887777666543 2 3
Q ss_pred CEEEEeeccccc
Q 012349 191 PVIISLAKGVEA 202 (465)
Q Consensus 191 ~ivIs~~kGi~~ 202 (465)
..| .+-|-+..
T Consensus 97 khV-l~EKPla~ 107 (312)
T 3o9z_A 97 ANA-LSEKPLVL 107 (312)
T ss_dssp CEE-EECSSSCS
T ss_pred CeE-EEECCCCC
Confidence 334 47776654
No 256
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=96.48 E-value=0.0053 Score=62.65 Aligned_cols=97 Identities=9% Similarity=0.034 Sum_probs=61.4
Q ss_pred CceEEEECccH---HHHHHHHHHHHhcCCCCCCeeEE--EEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchh
Q 012349 43 PLRIVGVGAGA---WGSVFTAMLQDSYGYLRDKVLIR--IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYV 117 (465)
Q Consensus 43 ~mkIaIIGaGa---mGsalA~~La~~~G~~~~~~~V~--l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~ 117 (465)
++||+|||+|. ||...+..+... + +.++. +++++++..++. -++.+ .+
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~-~----~~~lva~v~d~~~~~a~~~--------a~~~g------------~~-- 64 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRD-N----TFVLVAGAFDIDPIRGSAF--------GEQLG------------VD-- 64 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGG-G----SEEEEEEECCSSHHHHHHH--------HHHTT------------CC--
T ss_pred cceEEEEcCCccchhHHHHHHHHhhC-C----CeEEEEEEeCCCHHHHHHH--------HHHhC------------CC--
Confidence 47999999999 999988887765 3 14554 578887654321 00000 00
Q ss_pred hhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC-------CCEEEEecCcchHHHHHHHHHHhhhccCCC
Q 012349 118 EARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD-------ADIVINGLPSTETKEVFEEISRYWKERITV 190 (465)
Q Consensus 118 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~-------aDiVIlaVps~~l~~vl~~l~~~l~~~~~~ 190 (465)
...+.+|.++.+.+ .|+|++|+|.....+++..... . +
T Consensus 65 -----------------------------~~~~~~~~~~ll~~~~~~~~~vD~V~i~tp~~~H~~~~~~al~---a---G 109 (398)
T 3dty_A 65 -----------------------------SERCYADYLSMFEQEARRADGIQAVSIATPNGTHYSITKAALE---A---G 109 (398)
T ss_dssp -----------------------------GGGBCSSHHHHHHHHTTCTTCCSEEEEESCGGGHHHHHHHHHH---T---T
T ss_pred -----------------------------cceeeCCHHHHHhcccccCCCCCEEEECCCcHHHHHHHHHHHH---C---C
Confidence 11245677777653 8999999999887777665543 2 3
Q ss_pred CEEEEeeccccc
Q 012349 191 PVIISLAKGVEA 202 (465)
Q Consensus 191 ~ivIs~~kGi~~ 202 (465)
..| .+-|-+..
T Consensus 110 khV-l~EKPla~ 120 (398)
T 3dty_A 110 LHV-VCEKPLCF 120 (398)
T ss_dssp CEE-EECSCSCS
T ss_pred CeE-EEeCCCcC
Confidence 333 45666544
No 257
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.48 E-value=0.018 Score=55.66 Aligned_cols=65 Identities=23% Similarity=0.190 Sum_probs=46.2
Q ss_pred CCCeeEeecchhHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
.+|-++-.|-.-.--+.-|++. +. .-..+++.|+|+|.+|.+++..|++. | .+|++|+|+.+.++
T Consensus 92 ~~g~l~G~ntD~~G~~~~L~~~-~~-~l~~k~vlViGaGg~g~a~a~~L~~~-G-----~~V~v~~R~~~~~~ 156 (271)
T 1nyt_A 92 EDGRLLGDNTDGVGLLSDLERL-SF-IRPGLRILLIGAGGASRGVLLPLLSL-D-----CAVTITNRTVSRAE 156 (271)
T ss_dssp TTSCEEEECCHHHHHHHHHHHH-TC-CCTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSHHHHH
T ss_pred CCCeEEEeCCCHHHHHHHHHhc-Cc-CcCCCEEEEECCcHHHHHHHHHHHHc-C-----CEEEEEECCHHHHH
Confidence 4565566665544444445442 22 12346899999999999999999998 7 79999999976544
No 258
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=96.44 E-value=0.0061 Score=64.22 Aligned_cols=92 Identities=16% Similarity=0.050 Sum_probs=62.7
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 41 ~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
...++|+|||.|.+|..+|..+... | .+|++|+++...... ...
T Consensus 255 l~GktVgIIG~G~IG~~vA~~l~~~-G-----~~Viv~d~~~~~~~~-------------------------a~~----- 298 (479)
T 1v8b_A 255 ISGKIVVICGYGDVGKGCASSMKGL-G-----ARVYITEIDPICAIQ-------------------------AVM----- 298 (479)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHH-T-----CEEEEECSCHHHHHH-------------------------HHT-----
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhC-c-----CEEEEEeCChhhHHH-------------------------HHH-----
Confidence 3457999999999999999999877 7 899999998743210 000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecc
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kG 199 (465)
..+.+ .++++++..+|+|++++....+-. .+....+++ +++++.+.-|
T Consensus 299 -------------------------~g~~~-~~l~ell~~aDiVi~~~~t~~lI~--~~~l~~MK~---gailiNvgrg 346 (479)
T 1v8b_A 299 -------------------------EGFNV-VTLDEIVDKGDFFITCTGNVDVIK--LEHLLKMKN---NAVVGNIGHF 346 (479)
T ss_dssp -------------------------TTCEE-CCHHHHTTTCSEEEECCSSSSSBC--HHHHTTCCT---TCEEEECSST
T ss_pred -------------------------cCCEe-cCHHHHHhcCCEEEECCChhhhcC--HHHHhhcCC---CcEEEEeCCC
Confidence 01222 468888999999999975443211 122233555 6788887766
No 259
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=96.44 E-value=0.0062 Score=64.43 Aligned_cols=37 Identities=11% Similarity=0.145 Sum_probs=32.1
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (465)
..++|+|+|+|.+|..+|..+... | .+|++|++++..
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~-G-----a~Viv~d~~~~~ 309 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQ-G-----ARVSVTEIDPIN 309 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEEeCCHHH
Confidence 347899999999999999999876 7 789999998754
No 260
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=96.43 E-value=0.03 Score=55.52 Aligned_cols=94 Identities=17% Similarity=0.186 Sum_probs=66.1
Q ss_pred CCceEEEE-Cc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhh
Q 012349 42 DPLRIVGV-GA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (465)
Q Consensus 42 ~~mkIaII-Ga-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (465)
++.+|+|| |+ |.+|...+..|.+. | ++ .+|.-++..... ..
T Consensus 12 ~~~siaVV~Gasg~~G~~~~~~l~~~-G-----~~-~v~~VnP~~~g~-------------------------~i----- 54 (305)
T 2fp4_A 12 DKNTKVICQGFTGKQGTFHSQQALEY-G-----TN-LVGGTTPGKGGK-------------------------TH----- 54 (305)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHH-T-----CE-EEEEECTTCTTC-------------------------EE-----
T ss_pred CCCcEEEEECCCCCHHHHHHHHHHHC-C-----Cc-EEEEeCCCcCcc-------------------------eE-----
Confidence 34678888 98 99999999999887 7 66 455555531000 00
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEee
Q 012349 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (465)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~ 197 (465)
..+.+..+++++.+ +.|+++++||+....++++++... . -..++.++
T Consensus 55 --------------------------~G~~vy~sl~el~~~~~vD~avI~vP~~~~~~~~~e~i~~-G----i~~iv~~t 103 (305)
T 2fp4_A 55 --------------------------LGLPVFNTVKEAKEQTGATASVIYVPPPFAAAAINEAIDA-E----VPLVVCIT 103 (305)
T ss_dssp --------------------------TTEEEESSHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHT-T----CSEEEECC
T ss_pred --------------------------CCeeeechHHHhhhcCCCCEEEEecCHHHHHHHHHHHHHC-C----CCEEEEEC
Confidence 03445667777777 899999999999999999887653 1 13467788
Q ss_pred cccccc
Q 012349 198 KGVEAE 203 (465)
Q Consensus 198 kGi~~~ 203 (465)
.|+..+
T Consensus 104 ~G~~~~ 109 (305)
T 2fp4_A 104 EGIPQQ 109 (305)
T ss_dssp CCCCHH
T ss_pred CCCChH
Confidence 898654
No 261
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=96.41 E-value=0.02 Score=56.64 Aligned_cols=95 Identities=15% Similarity=0.033 Sum_probs=62.2
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 42 ~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
.|+||+|||+ |.||...+..+... + ..-|-+++++++... ..+ ..+
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~-~----~~lvav~d~~~~~~~----------~~~-------------~~~----- 48 (318)
T 3oa2_A 2 HMKNFALIGAAGYIAPRHMRAIKDT-G----NCLVSAYDINDSVGI----------IDS-------------ISP----- 48 (318)
T ss_dssp -CCEEEEETTTSSSHHHHHHHHHHT-T----CEEEEEECSSCCCGG----------GGG-------------TCT-----
T ss_pred CceEEEEECCCcHHHHHHHHHHHhC-C----CEEEEEEcCCHHHHH----------HHh-------------hCC-----
Confidence 4689999999 78999999999876 5 134667888765311 000 011
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHh-----------cCCCEEEEecCcchHHHHHHHHHHhhhccCC
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV-----------WDADIVINGLPSTETKEVFEEISRYWKERIT 189 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal-----------~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~ 189 (465)
...+.+|.++.+ .+.|+|++|+|+....+++..... .
T Consensus 49 --------------------------~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~---a--- 96 (318)
T 3oa2_A 49 --------------------------QSEFFTEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLR---L--- 96 (318)
T ss_dssp --------------------------TCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHH---T---
T ss_pred --------------------------CCcEECCHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHH---C---
Confidence 234566777654 568999999999887777666543 2
Q ss_pred CCEEEEeeccccc
Q 012349 190 VPVIISLAKGVEA 202 (465)
Q Consensus 190 ~~ivIs~~kGi~~ 202 (465)
+.. |.+-|-+..
T Consensus 97 Gkh-Vl~EKPla~ 108 (318)
T 3oa2_A 97 GCD-VICEKPLVP 108 (318)
T ss_dssp TCE-EEECSSCCS
T ss_pred CCe-EEEECCCcC
Confidence 333 347776544
No 262
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=96.41 E-value=0.0039 Score=62.71 Aligned_cols=91 Identities=24% Similarity=0.248 Sum_probs=62.5
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
.++|+|||.|.+|..+|..+..- | .+|..|++...... .. .
T Consensus 141 g~tvGIiG~G~IG~~va~~~~~f-g-----~~v~~~d~~~~~~~-----------~~---------------~------- 181 (334)
T 3kb6_A 141 RLTLGVIGTGRIGSRVAMYGLAF-G-----MKVLCYDVVKREDL-----------KE---------------K------- 181 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCHHH-----------HH---------------T-------
T ss_pred CcEEEEECcchHHHHHHHhhccc-C-----ceeeecCCccchhh-----------hh---------------c-------
Confidence 36899999999999999998765 6 79999987653100 00 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcc-hHHHHH-HHHHHhhhccCCCCEEEEeeccc
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~-~l~~vl-~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
... ..++++.++.||+|++.+|-. .++.++ ++.-..+++ ++++|.++-|=
T Consensus 182 ------------------------~~~-~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~---~a~lIN~aRG~ 233 (334)
T 3kb6_A 182 ------------------------GCV-YTSLDELLKESDVISLHVPYTKETHHMINEERISLMKD---GVYLINTARGK 233 (334)
T ss_dssp ------------------------TCE-ECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCT---TEEEEECSCGG
T ss_pred ------------------------Cce-ecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCC---CeEEEecCccc
Confidence 122 246788899999999999943 444433 222234555 68899888873
No 263
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=96.41 E-value=0.011 Score=59.47 Aligned_cols=40 Identities=13% Similarity=0.309 Sum_probs=31.0
Q ss_pred CCceEEEEC-ccHHHHHHHHHHHHhcCCCCC--CeeEEEEecCc
Q 012349 42 DPLRIVGVG-AGAWGSVFTAMLQDSYGYLRD--KVLIRIWRRPG 82 (465)
Q Consensus 42 ~~mkIaIIG-aGamGsalA~~La~~~G~~~~--~~~V~l~~r~~ 82 (465)
.+|||+|+| +|.+|++++..|+.. |.+.. ..++.|+|+++
T Consensus 2 ~~~kV~V~GaaG~VG~~la~~L~~~-~~~~e~~~~~l~L~Di~~ 44 (333)
T 5mdh_A 2 EPIRVLVTGAAGQIAYSLLYSIGNG-SVFGKDQPIILVLLDITP 44 (333)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTT-TTTCTTCCEEEEEECCGG
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhC-CCccccCCCEEEEEeCCC
Confidence 468999999 799999999999987 64311 12489999875
No 264
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=96.40 E-value=0.0067 Score=64.10 Aligned_cols=92 Identities=12% Similarity=0.056 Sum_probs=62.2
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 41 ~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
...++|+|||.|.+|..+|..+..- | .+|++|++++..... . ..
T Consensus 275 L~GktVgIIG~G~IG~~vA~~l~~~-G-----~~V~v~d~~~~~~~~-----------a--------------~~----- 318 (494)
T 3d64_A 275 IAGKIAVVAGYGDVGKGCAQSLRGL-G-----ATVWVTEIDPICALQ-----------A--------------AM----- 318 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSCHHHHHH-----------H--------------HT-----
T ss_pred cCCCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEEeCChHhHHH-----------H--------------HH-----
Confidence 3457999999999999999999866 6 899999998742110 0 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecc
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kG 199 (465)
..... .++++++..+|+|++++....+-. ++....+++ ++++|.+.-|
T Consensus 319 -------------------------~G~~~-~~l~ell~~aDiVi~~~~t~~lI~--~~~l~~MK~---gAilINvgrg 366 (494)
T 3d64_A 319 -------------------------EGYRV-VTMEYAADKADIFVTATGNYHVIN--HDHMKAMRH---NAIVCNIGHF 366 (494)
T ss_dssp -------------------------TTCEE-CCHHHHTTTCSEEEECSSSSCSBC--HHHHHHCCT---TEEEEECSSS
T ss_pred -------------------------cCCEe-CCHHHHHhcCCEEEECCCcccccC--HHHHhhCCC---CcEEEEcCCC
Confidence 01222 368888999999999985443210 223334455 6788887766
No 265
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=96.38 E-value=0.025 Score=55.97 Aligned_cols=33 Identities=21% Similarity=0.396 Sum_probs=28.3
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEec
Q 012349 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRR 80 (465)
Q Consensus 44 mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r 80 (465)
|||+|+|+ |.+|+.++..|+.. |.+ .++.++++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~-~~~---~el~L~Di 34 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKE-PFM---KDLVLIGR 34 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTC-TTC---CEEEEEEC
T ss_pred CEEEEECCCChhHHHHHHHHHhC-CCC---CEEEEEcC
Confidence 69999999 99999999999877 521 36899998
No 266
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=96.37 E-value=0.023 Score=55.86 Aligned_cols=94 Identities=18% Similarity=0.212 Sum_probs=66.4
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 42 ~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
+.+||+|+|+ |.||..++..+.+. | .+ .++..++.... ...
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~-g-----~~-~v~~VnP~~~g-------------------------~~i------ 47 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTY-G-----TK-IVAGVTPGKGG-------------------------MEV------ 47 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH-T-----CE-EEEEECTTCTT-------------------------CEE------
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHc-C-----Ce-EEEEECCCCCC-------------------------ceE------
Confidence 4479999998 99999999998887 7 55 34454442100 000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeec
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~k 198 (465)
..+.+..+++++.+ ++|+++++||+....+++++.... . -..+|..+.
T Consensus 48 -------------------------~G~~vy~sl~el~~~~~~Dv~Ii~vp~~~~~~~~~ea~~~-G----i~~vVi~t~ 97 (288)
T 1oi7_A 48 -------------------------LGVPVYDTVKEAVAHHEVDASIIFVPAPAAADAALEAAHA-G----IPLIVLITE 97 (288)
T ss_dssp -------------------------TTEEEESSHHHHHHHSCCSEEEECCCHHHHHHHHHHHHHT-T----CSEEEECCS
T ss_pred -------------------------CCEEeeCCHHHHhhcCCCCEEEEecCHHHHHHHHHHHHHC-C----CCEEEEECC
Confidence 03456677888777 899999999999999999887653 1 133666788
Q ss_pred ccccc
Q 012349 199 GVEAE 203 (465)
Q Consensus 199 Gi~~~ 203 (465)
|+...
T Consensus 98 G~~~~ 102 (288)
T 1oi7_A 98 GIPTL 102 (288)
T ss_dssp CCCHH
T ss_pred CCCHH
Confidence 98654
No 267
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.35 E-value=0.0096 Score=58.08 Aligned_cols=62 Identities=18% Similarity=0.208 Sum_probs=45.8
Q ss_pred CCCeeEeecchhHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012349 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (465)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (465)
.+|-++-.|-.-.-=+.-|++ .+ .+++.|||+|.+|.+++..|++. | .+|++++|+.+++++
T Consensus 95 ~~g~l~G~NTD~~Gf~~~L~~-~~-----~k~vlvlGaGGaaraia~~L~~~-G-----~~v~V~nRt~~ka~~ 156 (269)
T 3phh_A 95 ENDELVGYNTDALGFYLSLKQ-KN-----YQNALILGAGGSAKALACELKKQ-G-----LQVSVLNRSSRGLDF 156 (269)
T ss_dssp ETTEEEEECCHHHHHHHHCC---------CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCTTHHH
T ss_pred eCCEEEEecChHHHHHHHHHH-cC-----CCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHH
Confidence 366666667655444444443 12 47999999999999999999998 7 799999999876553
No 268
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.33 E-value=0.0075 Score=61.99 Aligned_cols=38 Identities=26% Similarity=0.354 Sum_probs=32.9
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSV 85 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~-~V~l~~r~~~~~ 85 (465)
..++|+|||+|.||.+++..+... | . +|++++|+.+.+
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~-G-----~~~V~v~~r~~~ra 204 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDR-G-----VRAVLVANRTYERA 204 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHH-C-----CSEEEEECSSHHHH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHC-C-----CCEEEEEeCCHHHH
Confidence 347999999999999999999888 7 6 899999987643
No 269
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.30 E-value=0.017 Score=57.87 Aligned_cols=48 Identities=13% Similarity=0.074 Sum_probs=33.2
Q ss_pred EEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccccc
Q 012349 149 KVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (465)
Q Consensus 149 ~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~~ 203 (465)
.+.+|.++.+. +.|+|++|||+....+++..... . +.. |.+-|-+...
T Consensus 81 ~~y~d~~ell~~~~iDaV~IatP~~~H~~~a~~al~---a---Gkh-Vl~EKPla~~ 130 (393)
T 4fb5_A 81 KATADWRALIADPEVDVVSVTTPNQFHAEMAIAALE---A---GKH-VWCEKPMAPA 130 (393)
T ss_dssp EEESCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHH---T---TCE-EEECSCSCSS
T ss_pred eecCCHHHHhcCCCCcEEEECCChHHHHHHHHHHHh---c---CCe-EEEccCCccc
Confidence 35688888775 47999999999887777665543 2 233 4577776553
No 270
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.29 E-value=0.011 Score=58.12 Aligned_cols=64 Identities=17% Similarity=0.030 Sum_probs=44.9
Q ss_pred CCeeEeecchhHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhh
Q 012349 15 NGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVD 86 (465)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~-~V~l~~r~~~~~~ 86 (465)
+|-++-.|-.-.-=+.-|++. + .+...+++.|+|+|.+|.+++..|++. | . +|++++|+.++++
T Consensus 96 ~g~l~G~NTD~~G~~~~L~~~-~-~~~~~k~vlvlGaGGaaraia~~L~~~-G-----~~~v~v~nRt~~ka~ 160 (282)
T 3fbt_A 96 REGISGFNTDYIGFGKMLSKF-R-VEIKNNICVVLGSGGAARAVLQYLKDN-F-----AKDIYVVTRNPEKTS 160 (282)
T ss_dssp SSCEEEECCHHHHHHHHHHHT-T-CCCTTSEEEEECSSTTHHHHHHHHHHT-T-----CSEEEEEESCHHHHH
T ss_pred CCEEEeeCCcHHHHHHHHHHc-C-CCccCCEEEEECCcHHHHHHHHHHHHc-C-----CCEEEEEeCCHHHHH
Confidence 566666665544333444432 2 122347899999999999999999988 7 5 8999999986544
No 271
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.28 E-value=0.012 Score=56.61 Aligned_cols=34 Identities=15% Similarity=0.223 Sum_probs=30.4
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
.+|+|+|+|.+|+.++..|+.. |. .+++++|++.
T Consensus 29 ~~VlvvG~GglG~~va~~La~~-Gv----g~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGA-GV----GTLVLADDDD 62 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TC----SEEEEECCCB
T ss_pred CcEEEEccCHHHHHHHHHHHHc-CC----CeEEEEeCCC
Confidence 6899999999999999999998 83 5899998875
No 272
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.26 E-value=0.012 Score=50.65 Aligned_cols=89 Identities=15% Similarity=0.076 Sum_probs=60.2
Q ss_pred CCceEEEECc----cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchh
Q 012349 42 DPLRIVGVGA----GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYV 117 (465)
Q Consensus 42 ~~mkIaIIGa----GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~ 117 (465)
.+++|+|||+ |.+|..+...|.+. | ++|+.+....+.+.
T Consensus 3 ~p~siAVVGaS~~~~~~g~~v~~~L~~~-g-----~~V~pVnP~~~~i~------------------------------- 45 (122)
T 3ff4_A 3 AMKKTLILGATPETNRYAYLAAERLKSH-G-----HEFIPVGRKKGEVL------------------------------- 45 (122)
T ss_dssp CCCCEEEETCCSCTTSHHHHHHHHHHHH-T-----CCEEEESSSCSEET-------------------------------
T ss_pred CCCEEEEEccCCCCCCHHHHHHHHHHHC-C-----CeEEEECCCCCcCC-------------------------------
Confidence 5678999998 56899999999888 7 67776655432111
Q ss_pred hhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEee
Q 012349 118 EARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (465)
Q Consensus 118 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~ 197 (465)
+..+..++.+.-. .|++++++|+..+.++++++... .. + .+.++
T Consensus 46 -----------------------------G~~~y~sl~dlp~-vDlavi~~p~~~v~~~v~e~~~~-g~---k--~v~~~ 89 (122)
T 3ff4_A 46 -----------------------------GKTIINERPVIEG-VDTVTLYINPQNQLSEYNYILSL-KP---K--RVIFN 89 (122)
T ss_dssp -----------------------------TEECBCSCCCCTT-CCEEEECSCHHHHGGGHHHHHHH-CC---S--EEEEC
T ss_pred -----------------------------CeeccCChHHCCC-CCEEEEEeCHHHHHHHHHHHHhc-CC---C--EEEEC
Confidence 1111222222223 79999999999999999998764 21 2 34588
Q ss_pred cccccc
Q 012349 198 KGVEAE 203 (465)
Q Consensus 198 kGi~~~ 203 (465)
.|+..+
T Consensus 90 ~G~~~~ 95 (122)
T 3ff4_A 90 PGTENE 95 (122)
T ss_dssp TTCCCH
T ss_pred CCCChH
Confidence 898654
No 273
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=96.25 E-value=0.033 Score=54.97 Aligned_cols=99 Identities=13% Similarity=0.150 Sum_probs=67.1
Q ss_pred cCCCCCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccc
Q 012349 37 GKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLK 115 (465)
Q Consensus 37 ~~~~~~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~ 115 (465)
...-....+|+|+|+ |.||..++..+.+. | .+ .++..++.... ...
T Consensus 7 ~~l~~~~~~vvV~Gasg~~G~~~~~~l~~~-g-----~~-~v~~VnP~~~g-------------------------~~i- 53 (297)
T 2yv2_A 7 AVLVDSETRVLVQGITGREGSFHAKAMLEY-G-----TK-VVAGVTPGKGG-------------------------SEV- 53 (297)
T ss_dssp --CCSTTCEEEEETTTSHHHHHHHHHHHHH-T-----CE-EEEEECTTCTT-------------------------CEE-
T ss_pred hHhhCCCCEEEEECCCCCHHHHHHHHHHhC-C-----Cc-EEEEeCCCCCC-------------------------ceE-
Confidence 333344578989998 99999999998887 7 55 45555542100 000
Q ss_pred hhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--C-CCEEEEecCcchHHHHHHHHHHhhhccCCCCE
Q 012349 116 YVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--D-ADIVINGLPSTETKEVFEEISRYWKERITVPV 192 (465)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~-aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~i 192 (465)
..+.+..+++++.+ + +|+++++||+....+++++.... . -..
T Consensus 54 ------------------------------~G~~vy~sl~el~~~~~~~DvaIi~vp~~~~~~~v~ea~~~-G----i~~ 98 (297)
T 2yv2_A 54 ------------------------------HGVPVYDSVKEALAEHPEINTSIVFVPAPFAPDAVYEAVDA-G----IRL 98 (297)
T ss_dssp ------------------------------TTEEEESSHHHHHHHCTTCCEEEECCCGGGHHHHHHHHHHT-T----CSE
T ss_pred ------------------------------CCEeeeCCHHHHhhcCCCCCEEEEecCHHHHHHHHHHHHHC-C----CCE
Confidence 03456677877765 5 99999999999999999887653 1 133
Q ss_pred EEEeecccccc
Q 012349 193 IISLAKGVEAE 203 (465)
Q Consensus 193 vIs~~kGi~~~ 203 (465)
+|.++.|+..+
T Consensus 99 vVi~t~G~~~~ 109 (297)
T 2yv2_A 99 VVVITEGIPVH 109 (297)
T ss_dssp EEECCCCCCHH
T ss_pred EEEECCCCCHH
Confidence 66678898653
No 274
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=96.24 E-value=0.021 Score=59.59 Aligned_cols=49 Identities=18% Similarity=0.101 Sum_probs=38.0
Q ss_pred HhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 28 RLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 28 ~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
-+|.++|..+.. ..-++|+|+|.|.+|..+|..+..- | .+|+++++++.
T Consensus 233 lvdgI~Ratg~~-L~GKTVgVIG~G~IGr~vA~~lraf-G-----a~Viv~d~dp~ 281 (464)
T 3n58_A 233 LVDGIRRGTDVM-MAGKVAVVCGYGDVGKGSAQSLAGA-G-----ARVKVTEVDPI 281 (464)
T ss_dssp HHHHHHHHHCCC-CTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSHH
T ss_pred HHHHHHHhcCCc-ccCCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEEeCCcc
Confidence 456667666532 2346899999999999999998766 7 78999988764
No 275
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=96.23 E-value=0.011 Score=62.01 Aligned_cols=84 Identities=18% Similarity=0.173 Sum_probs=57.1
Q ss_pred CCceEEEECc----cHHHHHHHHHHHHh-cCCCCCCeeE-EEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccc
Q 012349 42 DPLRIVGVGA----GAWGSVFTAMLQDS-YGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLK 115 (465)
Q Consensus 42 ~~mkIaIIGa----GamGsalA~~La~~-~G~~~~~~~V-~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~ 115 (465)
+++||+|||+ |.||...+..|.+. .+ .+| .+++++++.++.. .+. +
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~-----~~lvav~d~~~~~a~~~--------a~~-------------~-- 89 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQ-----FQIVALYNPTLKSSLQT--------IEQ-------------L-- 89 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTT-----EEEEEEECSCHHHHHHH--------HHH-------------T--
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCC-----eEEEEEEeCCHHHHHHH--------HHH-------------c--
Confidence 4579999999 99999999988764 23 554 5888887644321 000 0
Q ss_pred hhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHH
Q 012349 116 YVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (465)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~ 181 (465)
++ ....+.+|.++.+. +.|+|++|+|.....+++....
T Consensus 90 g~----------------------------~~~~~~~d~~ell~~~~vD~V~I~tp~~~H~~~~~~al 129 (479)
T 2nvw_A 90 QL----------------------------KHATGFDSLESFAQYKDIDMIVVSVKVPEHYEVVKNIL 129 (479)
T ss_dssp TC----------------------------TTCEEESCHHHHHHCTTCSEEEECSCHHHHHHHHHHHH
T ss_pred CC----------------------------CcceeeCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHH
Confidence 00 02346788888775 6899999999887766665543
No 276
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.22 E-value=0.029 Score=56.50 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=31.1
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
..||.|||+|..|+.+|..|+.. |. .+++++|++.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~a-GV----g~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAW-GV----RKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TC----CEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CC----CEEEEecCCE
Confidence 36899999999999999999998 83 5899998875
No 277
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.21 E-value=0.016 Score=61.75 Aligned_cols=54 Identities=28% Similarity=0.333 Sum_probs=35.2
Q ss_pred HHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 26 EERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
.+.+++|+..++..... ++|.|+|+|.+|..+|..|.+. | ++|.+++.+++.++
T Consensus 332 ~~~l~~~~~~~~~~~~~-~~viIiG~G~~G~~la~~L~~~-g-----~~v~vid~d~~~~~ 385 (565)
T 4gx0_A 332 KSQLAALEYLIGEAPED-ELIFIIGHGRIGCAAAAFLDRK-P-----VPFILIDRQESPVC 385 (565)
T ss_dssp ---------------CC-CCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSCCSSC
T ss_pred HHHHHHHHHHhcCCCCC-CCEEEECCCHHHHHHHHHHHHC-C-----CCEEEEECChHHHh
Confidence 35567788888765555 8999999999999999999988 7 99999999987654
No 278
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=96.21 E-value=0.0043 Score=63.23 Aligned_cols=39 Identities=18% Similarity=0.279 Sum_probs=33.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
..++|+|+|+|.+|.+++..+... | .+|++|+++++..+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~-G-----a~V~~~d~~~~~l~ 205 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM-G-----ATVTVLDINIDKLR 205 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHH
Confidence 457999999999999999999877 7 78999999876543
No 279
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.20 E-value=0.028 Score=54.79 Aligned_cols=67 Identities=19% Similarity=0.049 Sum_probs=47.1
Q ss_pred CCCeeEeecchhHHHhHH-HhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012349 14 SNGLIHHTNGSLEERLDE-LRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (465)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (465)
.+|-++-.|-.-.--+.- |++. +. +...+++.|+|+|.+|.+++..|++. |. .+|++++|+.+++++
T Consensus 92 ~~g~l~G~NTD~~G~~~~lL~~~-~~-~l~~k~~lvlGaGg~~~aia~~L~~~-G~----~~v~i~~R~~~~a~~ 159 (272)
T 3pwz_A 92 EDGRIVAENFDGIGLLRDIEENL-GE-PLRNRRVLLLGAGGAVRGALLPFLQA-GP----SELVIANRDMAKALA 159 (272)
T ss_dssp ETTEEEEECCHHHHHHHHHHTTS-CC-CCTTSEEEEECCSHHHHHHHHHHHHT-CC----SEEEEECSCHHHHHH
T ss_pred cCCeEEEecCCHHHHHHHHHHHc-CC-CccCCEEEEECccHHHHHHHHHHHHc-CC----CEEEEEeCCHHHHHH
Confidence 467677777665444443 4332 21 22347899999999999999999998 71 389999999875543
No 280
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=96.18 E-value=0.0094 Score=61.87 Aligned_cols=51 Identities=24% Similarity=0.206 Sum_probs=39.0
Q ss_pred HHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 26 EERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
+.-++-++|-.+.. ..-++|+|+|+|.+|..+|..+... | .+|+++++++.
T Consensus 204 ~s~~~gi~rat~~~-L~GktV~ViG~G~IGk~vA~~Lra~-G-----a~Viv~D~dp~ 254 (435)
T 3gvp_A 204 ESILDGLKRTTDMM-FGGKQVVVCGYGEVGKGCCAALKAM-G-----SIVYVTEIDPI 254 (435)
T ss_dssp HHHHHHHHHHHCCC-CTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHH
T ss_pred HHHHHHHHHhhCce-ecCCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEEeCChh
Confidence 44566677765432 2336899999999999999999776 7 78999998864
No 281
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.17 E-value=0.017 Score=53.12 Aligned_cols=38 Identities=24% Similarity=0.309 Sum_probs=32.2
Q ss_pred Cce-EEEECc-cHHHHHHHHHHH-HhcCCCCCCeeEEEEecCch-hhh
Q 012349 43 PLR-IVGVGA-GAWGSVFTAMLQ-DSYGYLRDKVLIRIWRRPGR-SVD 86 (465)
Q Consensus 43 ~mk-IaIIGa-GamGsalA~~La-~~~G~~~~~~~V~l~~r~~~-~~~ 86 (465)
||| |.|.|+ |.+|.+++..|+ +. | ++|++++|+++ .++
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~-g-----~~V~~~~r~~~~~~~ 45 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYT-D-----MHITLYGRQLKTRIP 45 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHC-C-----CEEEEEESSHHHHSC
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcC-C-----ceEEEEecCccccch
Confidence 455 999995 999999999999 67 7 89999999976 544
No 282
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=96.17 E-value=0.024 Score=57.14 Aligned_cols=52 Identities=19% Similarity=0.206 Sum_probs=41.0
Q ss_pred HHHhHHHhhhhcCCCCC---CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 26 EERLDELRRLMGKAEGD---PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 26 ~~~~~~~~~~~~~~~~~---~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
++|.|.-.+++|...+. ..+|+|+|+|..|+.++..|+.. |. ..++++|.+.
T Consensus 16 ~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~-Gv----g~itlvD~d~ 70 (346)
T 1y8q_A 16 AAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILA-GV----KGLTMLDHEQ 70 (346)
T ss_dssp HHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHH-TC----SEEEEECCCB
T ss_pred HHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHc-CC----CEEEEEECCC
Confidence 45777767777654333 36899999999999999999999 83 5899998764
No 283
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=96.16 E-value=0.0079 Score=62.37 Aligned_cols=85 Identities=12% Similarity=0.081 Sum_probs=57.4
Q ss_pred CCceEEEECc----cHHHHHHHHHHHHh-cCCCCCCee-EEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccc
Q 012349 42 DPLRIVGVGA----GAWGSVFTAMLQDS-YGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLK 115 (465)
Q Consensus 42 ~~mkIaIIGa----GamGsalA~~La~~-~G~~~~~~~-V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~ 115 (465)
+++||+|||+ |.||...+..|.+. .+ .+ |.+++++++.++.+ .+. +
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~-----~~lvav~d~~~~~~~~~---------a~~------------~-- 70 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQ-----FQITALYSPKIETSIAT---------IQR------------L-- 70 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTT-----EEEEEEECSSHHHHHHH---------HHH------------T--
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCC-----eEEEEEEeCCHHHHHHH---------HHH------------c--
Confidence 3579999999 99999999988764 23 55 45888887644321 100 0
Q ss_pred hhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHH
Q 012349 116 YVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISR 182 (465)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~ 182 (465)
+. ..+.+.+|.++.+. +.|+|++|+|.....+++.....
T Consensus 71 g~----------------------------~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~ 111 (438)
T 3btv_A 71 KL----------------------------SNATAFPTLESFASSSTIDMIVIAIQVASHYEVVMPLLE 111 (438)
T ss_dssp TC----------------------------TTCEEESSHHHHHHCSSCSEEEECSCHHHHHHHHHHHHH
T ss_pred CC----------------------------CcceeeCCHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHH
Confidence 00 02346678888775 58999999998877666655443
No 284
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.16 E-value=0.029 Score=55.93 Aligned_cols=61 Identities=18% Similarity=0.212 Sum_probs=41.7
Q ss_pred CCCeeEeecchhHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCc
Q 012349 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPG 82 (465)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~-~V~l~~r~~ 82 (465)
.+|-++-.|-.-.-=+.-|++. + .+...+++.|+|+|.+|.+++..|++. | . +|++++|++
T Consensus 127 ~~g~l~G~NTD~~Gf~~~L~~~-~-~~l~gk~~lVlGaGG~g~aia~~L~~~-G-----a~~V~i~nR~~ 188 (315)
T 3tnl_A 127 DDGVLTGHITDGTGYMRALKEA-G-HDIIGKKMTICGAGGAATAICIQAALD-G-----VKEISIFNRKD 188 (315)
T ss_dssp ETTEEEEECCHHHHHHHHHHHT-T-CCCTTSEEEEECCSHHHHHHHHHHHHT-T-----CSEEEEEECSS
T ss_pred cCCEEEEeCCCHHHHHHHHHHc-C-CCccCCEEEEECCChHHHHHHHHHHHC-C-----CCEEEEEECCC
Confidence 3565554554433333344431 1 122346899999999999999999988 7 5 899999993
No 285
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.09 E-value=0.041 Score=52.80 Aligned_cols=63 Identities=19% Similarity=0.075 Sum_probs=36.8
Q ss_pred CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccccccccccccCCCHHHHHHhHhCCCCccEEEEeCCchhh
Q 012349 160 DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIAS 238 (465)
Q Consensus 160 ~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~~~~~~~~~~~~se~I~e~lg~~~~~i~vlsGP~~a~ 238 (465)
++|+||-++++..+.+.++.... . +..+|..+-|+..+. .+.+.+.... ...+.++..||+.-
T Consensus 45 ~~DvvIDfT~p~a~~~~~~~a~~---~---g~~~VigTTG~~~e~---------~~~l~~aa~~-~~~~~vv~a~N~si 107 (245)
T 1p9l_A 45 NTEVVIDFTHPDVVMGNLEFLID---N---GIHAVVGTTGFTAER---------FQQVESWLVA-KPNTSVLIAPNFAI 107 (245)
T ss_dssp TCCEEEECSCTTTHHHHHHHHHH---T---TCEEEECCCCCCHHH---------HHHHHHHHHT-STTCEEEECSCCCH
T ss_pred CCcEEEEccChHHHHHHHHHHHH---c---CCCEEEcCCCCCHHH---------HHHHHHHHHh-CCCCCEEEECCccH
Confidence 67999978887777766665443 2 345666666876541 1234443211 01235677888765
No 286
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.09 E-value=0.0087 Score=61.72 Aligned_cols=38 Identities=18% Similarity=0.177 Sum_probs=33.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
..||+|||+|.+|...+..+..- | .+|++|+++++..+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l-G-----a~V~v~D~~~~~l~ 227 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL-G-----AVVSATDVRPAAKE 227 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSTTHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-C-----CEEEEEcCCHHHHH
Confidence 47999999999999999998776 7 79999999987544
No 287
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=96.07 E-value=0.0071 Score=61.30 Aligned_cols=39 Identities=18% Similarity=0.305 Sum_probs=33.8
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
..++|+|+|+|.+|.+++..+... | .+|++++|+++..+
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~-G-----a~V~~~d~~~~~~~ 203 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGM-G-----AQVTILDVNHKRLQ 203 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-C-----CEEEEEECCHHHHH
Confidence 358999999999999999999887 7 89999999876443
No 288
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=96.04 E-value=0.012 Score=59.51 Aligned_cols=46 Identities=11% Similarity=0.154 Sum_probs=31.0
Q ss_pred EecCHHHHhcC--CCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccccc
Q 012349 150 VVTNLQEAVWD--ADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (465)
Q Consensus 150 ~t~dl~eal~~--aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~ 202 (465)
+++|+++.+.+ .|+|++|+|+....+++.... .. +..|+ +-|-+..
T Consensus 71 ~~~~~~~ll~~~~iD~V~i~tp~~~h~~~~~~al---~~---Gk~V~-~EKP~a~ 118 (383)
T 3oqb_A 71 WTTDLDAALADKNDTMFFDAATTQARPGLLTQAI---NA---GKHVY-CEKPIAT 118 (383)
T ss_dssp EESCHHHHHHCSSCCEEEECSCSSSSHHHHHHHH---TT---TCEEE-ECSCSCS
T ss_pred ccCCHHHHhcCCCCCEEEECCCchHHHHHHHHHH---HC---CCeEE-EcCCCCC
Confidence 56788887755 899999999877666655543 33 34444 7776543
No 289
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=96.03 E-value=0.019 Score=57.49 Aligned_cols=37 Identities=11% Similarity=0.109 Sum_probs=27.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeE-EEEecCchh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRS 84 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V-~l~~r~~~~ 84 (465)
++||+|+|+|.+|..++..|.+. . +.++ .+.+++++.
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~~-~----~~elvav~d~~~~~ 39 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTKQ-D----DMELIGITKTKPDF 39 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-T----TEEEEEEEESSCSH
T ss_pred CcEEEEEeEhHHHHHHHHHHhcC-C----CCEEEEEEcCCHHH
Confidence 46999999999999999998765 2 1444 456666543
No 290
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=96.00 E-value=0.027 Score=56.26 Aligned_cols=100 Identities=16% Similarity=0.098 Sum_probs=62.1
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCC--CCCCee-EEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGY--LRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~--~~~~~~-V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
.||+|||+|.||...+..+....+. +....+ |-+++++++.+++. .+. +
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~---------a~~-------------~------ 58 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAA---------AGK-------------L------ 58 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHH---------HHH-------------H------
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHH---------HHH-------------c------
Confidence 4899999999999888877654110 000123 45778887654431 100 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeec
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~k 198 (465)
+ -..+.+|.++.+. +.|+|++|||+....+++..... . +.. |.+-|
T Consensus 59 -g------------------------~~~~~~d~~~ll~~~~iDaV~I~tP~~~H~~~~~~al~---a---Gkh-Vl~EK 106 (390)
T 4h3v_A 59 -G------------------------WSTTETDWRTLLERDDVQLVDVCTPGDSHAEIAIAALE---A---GKH-VLCEK 106 (390)
T ss_dssp -T------------------------CSEEESCHHHHTTCTTCSEEEECSCGGGHHHHHHHHHH---T---TCE-EEEES
T ss_pred -C------------------------CCcccCCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHH---c---CCC-ceeec
Confidence 0 0135678888775 47999999999887777665543 2 333 45777
Q ss_pred ccccc
Q 012349 199 GVEAE 203 (465)
Q Consensus 199 Gi~~~ 203 (465)
-+...
T Consensus 107 Pla~t 111 (390)
T 4h3v_A 107 PLANT 111 (390)
T ss_dssp SSCSS
T ss_pred Ccccc
Confidence 76553
No 291
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=95.99 E-value=0.0093 Score=61.30 Aligned_cols=42 Identities=17% Similarity=0.203 Sum_probs=33.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (465)
|+||+|+|+|.+|.+++..|++. |.+. .+|.+++|+.+.+++
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~-g~~~--~~V~v~~r~~~~~~~ 42 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMN-REVF--SHITLASRTLSKCQE 42 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC-TTTC--CEEEEEESCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCCc--eEEEEEECCHHHHHH
Confidence 47999999999999999999987 5100 279999999876554
No 292
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=95.95 E-value=0.043 Score=54.03 Aligned_cols=94 Identities=17% Similarity=0.193 Sum_probs=66.5
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 42 ~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
...+|+|+|+ |.||..++..+.+. | .+ .++..++.... ...
T Consensus 12 ~~~~v~V~Gasg~~G~~~~~~l~~~-g-----~~-~V~~VnP~~~g-------------------------~~i------ 53 (294)
T 2yv1_A 12 ENTKAIVQGITGRQGSFHTKKMLEC-G-----TK-IVGGVTPGKGG-------------------------QNV------ 53 (294)
T ss_dssp TTCCEEEETTTSHHHHHHHHHHHHT-T-----CC-EEEEECTTCTT-------------------------CEE------
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhC-C-----Ce-EEEEeCCCCCC-------------------------ceE------
Confidence 3467899998 99999999998877 6 55 55555553100 000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeec
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~k 198 (465)
.++.+..+++++.+ ++|+++++||+....+++++.... . -..+|..+.
T Consensus 54 -------------------------~G~~vy~sl~el~~~~~~Dv~ii~vp~~~~~~~v~ea~~~-G----i~~vVi~t~ 103 (294)
T 2yv1_A 54 -------------------------HGVPVFDTVKEAVKETDANASVIFVPAPFAKDAVFEAIDA-G----IELIVVITE 103 (294)
T ss_dssp -------------------------TTEEEESSHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHT-T----CSEEEECCS
T ss_pred -------------------------CCEeeeCCHHHHhhcCCCCEEEEccCHHHHHHHHHHHHHC-C----CCEEEEECC
Confidence 03456677888777 899999999999999999887653 1 234666788
Q ss_pred ccccc
Q 012349 199 GVEAE 203 (465)
Q Consensus 199 Gi~~~ 203 (465)
|+..+
T Consensus 104 G~~~~ 108 (294)
T 2yv1_A 104 HIPVH 108 (294)
T ss_dssp CCCHH
T ss_pred CCCHH
Confidence 98654
No 293
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=95.93 E-value=0.029 Score=54.89 Aligned_cols=23 Identities=39% Similarity=0.443 Sum_probs=20.1
Q ss_pred CCceEEEECccHHHHHHHHHHHH
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQD 64 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~ 64 (465)
+++||+|||+|.||...+..+..
T Consensus 6 ~~~rvgiIG~G~iG~~~~~~l~~ 28 (294)
T 1lc0_A 6 GKFGVVVVGVGRAGSVRLRDLKD 28 (294)
T ss_dssp CSEEEEEECCSHHHHHHHHHHTS
T ss_pred CcceEEEEEEcHHHHHHHHHHhc
Confidence 46899999999999998888764
No 294
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=95.87 E-value=0.014 Score=57.91 Aligned_cols=47 Identities=15% Similarity=0.060 Sum_probs=32.2
Q ss_pred EEecCHHHHhc--CCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccccc
Q 012349 149 KVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (465)
Q Consensus 149 ~~t~dl~eal~--~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~ 202 (465)
.+.+|.++.+. +.|+|++|+|.....+++..... . +.. |.+-|-+..
T Consensus 54 ~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~---a---Gkh-Vl~EKPla~ 102 (337)
T 3ip3_A 54 KKYNNWWEMLEKEKPDILVINTVFSLNGKILLEALE---R---KIH-AFVEKPIAT 102 (337)
T ss_dssp EECSSHHHHHHHHCCSEEEECSSHHHHHHHHHHHHH---T---TCE-EEECSSSCS
T ss_pred cccCCHHHHhcCCCCCEEEEeCCcchHHHHHHHHHH---C---CCc-EEEeCCCCC
Confidence 45678888775 48999999999877766655443 2 333 347776654
No 295
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=95.83 E-value=0.034 Score=55.89 Aligned_cols=42 Identities=12% Similarity=0.153 Sum_probs=30.5
Q ss_pred CHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 153 NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 153 dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
+.++...++|+||+|+|...-.++.+.+. +. +..+|.++.-+
T Consensus 68 ~~~~~~~~~Dvvf~a~p~~~s~~~~~~~~---~~---g~~vIDlSa~f 109 (337)
T 3dr3_A 68 DISEFSPGVDVVFLATAHEVSHDLAPQFL---EA---GCVVFDLSGAF 109 (337)
T ss_dssp SGGGTCTTCSEEEECSCHHHHHHHHHHHH---HT---TCEEEECSSTT
T ss_pred CHHHHhcCCCEEEECCChHHHHHHHHHHH---HC---CCEEEEcCCcc
Confidence 44443378999999999988887777764 33 56788887544
No 296
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.80 E-value=0.053 Score=56.71 Aligned_cols=54 Identities=17% Similarity=0.294 Sum_probs=46.0
Q ss_pred HHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012349 27 ERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (465)
Q Consensus 27 ~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (465)
+.+++++..+++.+....+|.|+|+|.+|..+|..|.+. ++|.++.+++++++.
T Consensus 219 ~~i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~~-------~~v~iIE~d~~r~~~ 272 (461)
T 4g65_A 219 NHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQT-------YSVKLIERNLQRAEK 272 (461)
T ss_dssp TTHHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCHHHHHH
T ss_pred chHHHHHHhhccccccccEEEEEcchHHHHHHHHHhhhc-------CceEEEecCHHHHHH
Confidence 567788888888888889999999999999999998543 789999999876654
No 297
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=95.79 E-value=0.009 Score=61.17 Aligned_cols=117 Identities=18% Similarity=0.254 Sum_probs=71.3
Q ss_pred ceEEEECccHHH-HHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhhhc
Q 012349 44 LRIVGVGAGAWG-SVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (465)
Q Consensus 44 mkIaIIGaGamG-salA~~La~~~G~~~~~~~V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (465)
||+..+|+|++| +.++..|.++ | ++|++.++++..++.+|+++ .|.-.+. +
T Consensus 1 mkavhfGaGniGRGfig~~l~~~-g-----~~v~f~dv~~~~i~~Ln~~~-------------------~Y~V~~~---g 52 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADA-G-----IQLTFADVNQVVLDALNARH-------------------SYQVHVV---G 52 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHT-T-----CEEEEEESCHHHHHHHHHHS-------------------EEEEEEE---S
T ss_pred CcEEEECCCccchhhHHHHHHHc-C-----CeEEEEeCCHHHHHHHhcCC-------------------CEEEEEc---c
Confidence 799999999999 4555666666 7 89999999998777654332 1221110 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEe-c---CHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhcc----C-CCCEE
Q 012349 123 DRTLHADEILKDGFCLNMIDTPLCPLKVV-T---NLQEAVWDADIVINGLPSTETKEVFEEISRYWKER----I-TVPVI 193 (465)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t-~---dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~----~-~~~iv 193 (465)
...- ... ..++++. + +.-+++.++|+|..++.+..++.+...|...+... . +.-.|
T Consensus 53 ~~~~--------~~~-------v~~v~ai~s~~~~~~~~i~~adlitT~vG~~~l~~i~~~l~~~L~~R~~~~~~~plti 117 (382)
T 3h2z_A 53 ETEQ--------VDT-------VSGVNAVSSIGDDVVDLIAQVDLVTTAVGPVVLERIAPAIAKGLVKRKEQGNESPLNI 117 (382)
T ss_dssp SSEE--------EEE-------EESCEEEETTSSHHHHHHTTCSEEEECCCHHHHHHTHHHHHHHHHHHHHHTCCSCEEE
T ss_pred CCcc--------eEE-------EEEEEEEeCcHHHHHHHHcCCCEEEECCCcccHHHHHHHHHHHHHHHHHcCCCCCcEE
Confidence 0000 000 0133332 1 23345789999999999988888877776655321 1 12347
Q ss_pred EEeecccccc
Q 012349 194 ISLAKGVEAE 203 (465)
Q Consensus 194 Is~~kGi~~~ 203 (465)
+||-|-....
T Consensus 118 lsCeN~~~ng 127 (382)
T 3h2z_A 118 IACENMVRGT 127 (382)
T ss_dssp EECCSSTTHH
T ss_pred EECCCccchH
Confidence 8888776544
No 298
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=95.76 E-value=0.0089 Score=60.92 Aligned_cols=73 Identities=14% Similarity=0.179 Sum_probs=46.9
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhhHHHHhchhhhHHhhhhcccccchhhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~-V~l~~r~~~~~~~i~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (465)
.+.||+|||+| ||...+..+.+. . ++.+ |-++++++++.++. .+. |
T Consensus 6 ~~~rv~VvG~G-~g~~h~~a~~~~-~---~~~elvav~~~~~~~a~~~---------a~~------------~------- 52 (372)
T 4gmf_A 6 PKQRVLIVGAK-FGEMYLNAFMQP-P---EGLELVGLLAQGSARSREL---------AHA------------F------- 52 (372)
T ss_dssp -CEEEEEECST-TTHHHHHTTSSC-C---TTEEEEEEECCSSHHHHHH---------HHH------------T-------
T ss_pred CCCEEEEEehH-HHHHHHHHHHhC-C---CCeEEEEEECCCHHHHHHH---------HHH------------h-------
Confidence 45799999999 898777766543 1 1244 44788888654431 100 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCcchH
Q 012349 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTET 173 (465)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~eal~~aDiVIlaVps~~l 173 (465)
++.+.+|.++.+.+.|+++++||+...
T Consensus 53 --------------------------gv~~~~~~~~l~~~~D~v~i~~p~~~h 79 (372)
T 4gmf_A 53 --------------------------GIPLYTSPEQITGMPDIACIVVRSTVA 79 (372)
T ss_dssp --------------------------TCCEESSGGGCCSCCSEEEECCC--CT
T ss_pred --------------------------CCCEECCHHHHhcCCCEEEEECCCccc
Confidence 223457788888889999999998654
No 299
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.68 E-value=0.026 Score=56.94 Aligned_cols=34 Identities=18% Similarity=0.323 Sum_probs=26.4
Q ss_pred CceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 012349 43 PLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (465)
Q Consensus 43 ~mkIaIIG-aGamGsalA~~La~~~G~~~~~~~V~l~~r~ 81 (465)
++||+|+| +|.+|..+...|.++ . ..+|..+.++
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~-p----~~ev~~i~~s 42 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADH-P----MFELTALAAS 42 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC-S----SEEEEEEEEC
T ss_pred cceEEEECcCCHHHHHHHHHHhcC-C----CCEEEEEEcc
Confidence 37999999 799999999999765 3 2577666543
No 300
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=95.67 E-value=0.018 Score=62.02 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=30.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
..||+|||+|..|+.+|..|+.. |. .+++++|.+.
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~a-GV----G~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAW-GV----RKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TC----CEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CC----CEEEEECCCc
Confidence 36899999999999999999998 83 5899998774
No 301
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=95.66 E-value=0.024 Score=56.72 Aligned_cols=23 Identities=26% Similarity=0.348 Sum_probs=20.8
Q ss_pred CceEEEECccHHHHHHHHHHHHh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDS 65 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~ 65 (465)
|+||+|||+|.||+.++..+.++
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~ 24 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRK 24 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT
T ss_pred cEEEEEEeccHHHHHHHHHHHhh
Confidence 58999999999999999998764
No 302
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=95.65 E-value=0.028 Score=57.51 Aligned_cols=37 Identities=24% Similarity=0.250 Sum_probs=31.9
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 012349 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (465)
Q Consensus 40 ~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~ 81 (465)
.-...||+|+|+|++|.++|..|... |. .+|++++|+
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~-G~----~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDL-GV----KNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHH-TC----CEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhC-CC----CeEEEEECC
Confidence 34457999999999999999999988 72 489999998
No 303
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.61 E-value=0.076 Score=52.76 Aligned_cols=62 Identities=18% Similarity=0.253 Sum_probs=43.0
Q ss_pred CCCeeEeecchhHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
.+|-++-.|-.-.-=+.-|++. + .....+++.|+|+|.+|.+++..|++. |. .+|++++|+.
T Consensus 121 ~~g~l~G~NTD~~Gf~~~L~~~-~-~~l~gk~~lVlGAGGaaraia~~L~~~-G~----~~v~v~nRt~ 182 (312)
T 3t4e_A 121 DDGYLRGYNTDGTGHIRAIKES-G-FDMRGKTMVLLGAGGAATAIGAQAAIE-GI----KEIKLFNRKD 182 (312)
T ss_dssp ETTEEEEECHHHHHHHHHHHHT-T-CCCTTCEEEEECCSHHHHHHHHHHHHT-TC----SEEEEEECSS
T ss_pred cCCEEEEeCCcHHHHHHHHHhc-C-CCcCCCEEEEECcCHHHHHHHHHHHHc-CC----CEEEEEECCC
Confidence 3666666665444333444432 2 222346899999999999999999988 71 3899999994
No 304
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=95.60 E-value=0.025 Score=57.45 Aligned_cols=48 Identities=15% Similarity=0.190 Sum_probs=37.9
Q ss_pred hhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 33 RRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 33 ~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
+..+|..+-.-++|+|+|+|+||..+|..|.+. | .+|++++++.+.++
T Consensus 163 ~~~~G~~~L~GktV~V~G~G~VG~~~A~~L~~~-G-----akVvv~D~~~~~l~ 210 (364)
T 1leh_A 163 KEAFGSDSLEGLAVSVQGLGNVAKALCKKLNTE-G-----AKLVVTDVNKAAVS 210 (364)
T ss_dssp HHHHSSCCCTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHH
T ss_pred HhhccccCCCcCEEEEECchHHHHHHHHHHHHC-C-----CEEEEEcCCHHHHH
Confidence 444564344558999999999999999999988 7 88999998875443
No 305
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.59 E-value=0.027 Score=52.60 Aligned_cols=39 Identities=13% Similarity=0.211 Sum_probs=32.6
Q ss_pred CCceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhh
Q 012349 42 DPLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (465)
Q Consensus 42 ~~mkIaIIG-aGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (465)
+||+|.|.| +|.+|.+++..|++. | .++|++++|+++..
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~-G----~~~V~~~~R~~~~~ 61 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADK-Q----TIKQTLFARQPAKI 61 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTC-T----TEEEEEEESSGGGS
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhC-C----CceEEEEEcChhhh
Confidence 357899999 599999999999987 5 26899999987644
No 306
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=95.58 E-value=0.051 Score=54.58 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=25.8
Q ss_pred eEEecCHHHHhcCCCEEEEecCcchHHHHHHHHH
Q 012349 148 LKVVTNLQEAVWDADIVINGLPSTETKEVFEEIS 181 (465)
Q Consensus 148 i~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~ 181 (465)
+.++.+.++...++|+||.|+|+....+..+...
T Consensus 65 v~v~~~~e~l~~~vDvV~~aTp~~~s~~~a~~~~ 98 (340)
T 1b7g_O 65 IPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYL 98 (340)
T ss_dssp CCCCCCHHHHHHHCSEEEECCSTTHHHHHHHHHH
T ss_pred cccccCHhHhhcCCCEEEECCCCchhHHHHHHHH
Confidence 4455677776678999999999998877766544
No 307
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.57 E-value=0.085 Score=51.97 Aligned_cols=64 Identities=28% Similarity=0.373 Sum_probs=31.3
Q ss_pred cCCCeeEeecchhHHHhHHHhhhhcC-CCC---CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 13 SSNGLIHHTNGSLEERLDELRRLMGK-AEG---DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
||.---||..|---.|.--||. +|. ..+ ...||.|||+|..|+.++..|+.. |. .+++++|.+.
T Consensus 3 ~~~~~~~~~~~~~y~r~i~L~~-~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~a-GV----G~i~lvD~D~ 70 (292)
T 3h8v_A 3 SSHHHHHHSSGLVPRGSMALKR-MGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRC-GI----GKLLLFDYDK 70 (292)
T ss_dssp ------------------------------CGGGGCEEEEECCSHHHHHHHHHHHHH-TC----SEEEEECCCB
T ss_pred cccccccccCCCCchHhhcccc-cChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHc-CC----CEEEEECCCc
Confidence 3444456777766666555554 333 122 236899999999999999999999 83 5899998875
No 308
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=95.53 E-value=0.013 Score=60.26 Aligned_cols=38 Identities=18% Similarity=0.375 Sum_probs=32.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
..+|+|+|+|.+|...+..+... | .+|++++++++..+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~-G-----a~V~v~D~~~~~~~ 209 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSL-G-----AIVRAFDTRPEVKE 209 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCGGGHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEcCCHHHHH
Confidence 47999999999999999988776 7 78999999886544
No 309
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=95.50 E-value=0.042 Score=55.14 Aligned_cols=23 Identities=13% Similarity=0.125 Sum_probs=20.8
Q ss_pred CceEEEECccHHHHHHHHHHHHh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDS 65 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~ 65 (465)
|+||+|+|+|.+|..++..|.++
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~ 23 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQ 23 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS
T ss_pred CeEEEEEeECHHHHHHHHHHHcC
Confidence 47999999999999999999865
No 310
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=95.50 E-value=0.011 Score=58.86 Aligned_cols=34 Identities=24% Similarity=0.466 Sum_probs=31.6
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
|||+|||+|.-|.++|..|++. | ++|+++.+++.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~-G-----~~v~v~Er~~~ 35 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH-G-----IKVTIYERNSA 35 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-C-----CCEEEEecCCC
Confidence 8999999999999999999999 8 89999998754
No 311
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.47 E-value=0.022 Score=54.04 Aligned_cols=35 Identities=14% Similarity=0.125 Sum_probs=31.2
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
..++|.|||+|.+|..-+..|.+. | .+|++++++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~-G-----A~VtVvap~~ 64 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE-G-----AAITVVAPTV 64 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG-C-----CCEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEECCCC
Confidence 447999999999999999999998 7 8999998764
No 312
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=95.45 E-value=0.063 Score=53.25 Aligned_cols=39 Identities=13% Similarity=0.110 Sum_probs=28.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCchh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRS 84 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~-V~l~~r~~~~ 84 (465)
+++||+|||+|.+|..++..+.++.. +.+ |.+++++++.
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~~~----~~elvav~d~~~~~ 42 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRNAK----YLEMGAMVGIDAAS 42 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHCS----SEEEEEEECSCTTC
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhhCc----CeEEEEEEeCChhh
Confidence 35799999999999999999976311 133 4567777653
No 313
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=95.42 E-value=0.018 Score=60.01 Aligned_cols=38 Identities=21% Similarity=0.242 Sum_probs=33.1
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
+++|.|+|+|.+|.+++..|++. | ++|++++|+.+.++
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~-G-----~~V~v~~R~~~~a~ 40 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDS-G-----IKVTVACRTLESAK 40 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTT-T-----CEEEEEESSHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-c-----CEEEEEECCHHHHH
Confidence 36899999999999999999987 7 78999999876543
No 314
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=95.38 E-value=0.11 Score=52.51 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=31.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
..+|+|||+|..|+.++..|+.. |. .+++++|++.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~a-Gv----g~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATS-GI----GEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TC----SEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CC----CeEEEECCCc
Confidence 36899999999999999999999 83 5899999875
No 315
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.37 E-value=0.041 Score=50.48 Aligned_cols=38 Identities=24% Similarity=0.261 Sum_probs=33.4
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhh
Q 012349 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (465)
Q Consensus 42 ~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (465)
.||||.|.|+ |.+|.+++..|.+. | ++|++.+|+++..
T Consensus 3 ~m~~ilItGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~~ 41 (227)
T 3dhn_A 3 KVKKIVLIGASGFVGSALLNEALNR-G-----FEVTAVVRHPEKI 41 (227)
T ss_dssp CCCEEEEETCCHHHHHHHHHHHHTT-T-----CEEEEECSCGGGC
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHC-C-----CEEEEEEcCcccc
Confidence 3589999995 99999999999998 7 8999999987643
No 316
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.31 E-value=0.069 Score=57.66 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=31.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
..||+|||+|..|+.+|..|+.. |. .+++++|.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~a-GV----G~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAW-GV----RKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TC----CEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CC----CEEEEEcCCC
Confidence 36899999999999999999998 83 5899999875
No 317
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.22 E-value=0.021 Score=54.52 Aligned_cols=39 Identities=18% Similarity=0.131 Sum_probs=34.0
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
++|||.|.|+|.+|+.++..|.++ | ++|+..+|++...+
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~~~ 42 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQ-G-----WRIIGTSRNPDQME 42 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGG-T-----CEEEEEESCGGGHH
T ss_pred CcCcEEEECCcHHHHHHHHHHHHC-C-----CEEEEEEcChhhhh
Confidence 458999999999999999999998 7 89999999876443
No 318
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.13 E-value=0.018 Score=51.83 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=30.3
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
..|+|||||.-|.+.|..|+++ | ++|+++++++
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~-G-----~~V~v~Ek~~ 35 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAA-G-----HQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEECCC
Confidence 3599999999999999999999 8 8999999865
No 319
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=95.11 E-value=0.018 Score=57.05 Aligned_cols=37 Identities=14% Similarity=-0.031 Sum_probs=31.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
.++|.|+|+|.+|..++..|.+. | + |++++++++.++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~-g-----~-v~vid~~~~~~~ 151 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGS-E-----V-FVLAEDENVRKK 151 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGS-C-----E-EEEESCGGGHHH
T ss_pred cCCEEEECCcHHHHHHHHHHHhC-C-----c-EEEEeCChhhhh
Confidence 46899999999999999999887 6 8 999999886543
No 320
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.04 E-value=0.044 Score=50.85 Aligned_cols=38 Identities=21% Similarity=0.206 Sum_probs=33.8
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 43 ~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
.|+|.|.|+ |.+|.+++..|++. | ++|++.+|+++..+
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~-G-----~~V~~~~R~~~~~~ 59 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNK-G-----HEPVAMVRNEEQGP 59 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESSGGGHH
T ss_pred CCeEEEECCCChHHHHHHHHHHhC-C-----CeEEEEECChHHHH
Confidence 479999998 99999999999998 7 89999999986543
No 321
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=95.04 E-value=0.032 Score=56.84 Aligned_cols=39 Identities=18% Similarity=0.228 Sum_probs=32.8
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
...+|+|+|+|.+|.+.+..+... | .+|++++++++..+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-G-----a~V~~~d~~~~~~~ 209 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL-G-----AVVMATDVRAATKE 209 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCSTTHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHH
Confidence 457999999999999999988776 7 67999999876543
No 322
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=95.02 E-value=0.046 Score=54.13 Aligned_cols=40 Identities=23% Similarity=0.417 Sum_probs=31.0
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCC--CCeeEEEEecCc
Q 012349 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLR--DKVLIRIWRRPG 82 (465)
Q Consensus 42 ~~mkIaIIGa-GamGsalA~~La~~~G~~~--~~~~V~l~~r~~ 82 (465)
++|||+|+|+ |.+|+.++..|... |.+. ..++|.++++++
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~~-g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAG-EMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTT-TTTCTTCCEEEEEECCGG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC-CCCCCCCCCEEEEEeCCC
Confidence 4589999997 99999999999987 6320 013899998864
No 323
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=94.92 E-value=0.11 Score=50.57 Aligned_cols=67 Identities=18% Similarity=0.177 Sum_probs=48.4
Q ss_pred CCCeeEeecchhHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012349 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (465)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (465)
.+|-++-.|-.-.-=+.-|++.- .+...+++.|+|+|..+.+++..|++. |. .+|++++|+.++.+.
T Consensus 98 ~dG~l~G~NTD~~Gf~~~L~~~g--~~~~~~~~lilGaGGaarai~~aL~~~-g~----~~i~i~nRt~~ra~~ 164 (269)
T 3tum_A 98 RDGRLLGDNVDGAGFLGAAHKHG--FEPAGKRALVIGCGGVGSAIAYALAEA-GI----ASITLCDPSTARMGA 164 (269)
T ss_dssp TTSCEEEECCHHHHHHHHHHHTT--CCCTTCEEEEECCSHHHHHHHHHHHHT-TC----SEEEEECSCHHHHHH
T ss_pred CCCEEEEEEcChHHHHHHHHHhC--CCcccCeEEEEecHHHHHHHHHHHHHh-CC----CeEEEeCCCHHHHHH
Confidence 47877666665554455555432 223447899999999999999999988 72 589999999876543
No 324
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.91 E-value=0.02 Score=54.74 Aligned_cols=35 Identities=23% Similarity=0.292 Sum_probs=32.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
+|||.|.|+|.+|+.++..|.+. | ++|+..+|+++
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQ-G-----HEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCCcc
Confidence 47999999999999999999998 7 89999999865
No 325
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=94.82 E-value=0.087 Score=52.98 Aligned_cols=37 Identities=27% Similarity=0.410 Sum_probs=27.3
Q ss_pred hcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 158 VWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 158 l~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
+.++|+||+|+|.....++++.+. .. +..+|+++.-+
T Consensus 66 ~~~vDvV~~a~g~~~s~~~a~~~~---~a---G~~VId~Sa~~ 102 (345)
T 2ozp_A 66 LEPADILVLALPHGVFAREFDRYS---AL---APVLVDLSADF 102 (345)
T ss_dssp CCCCSEEEECCCTTHHHHTHHHHH---TT---CSEEEECSSTT
T ss_pred hcCCCEEEEcCCcHHHHHHHHHHH---HC---CCEEEEcCccc
Confidence 578999999999998777766654 33 56788777533
No 326
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=94.79 E-value=0.057 Score=54.59 Aligned_cols=38 Identities=16% Similarity=0.223 Sum_probs=27.4
Q ss_pred HHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 156 EAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 156 eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
+++.++|+||+|+|.....++++.+ . . +..+|.++.-+
T Consensus 76 ~~~~~~DvVf~alg~~~s~~~~~~~-~---~---G~~vIDlSa~~ 113 (352)
T 2nqt_A 76 AVLGGHDAVFLALPHGHSAVLAQQL-S---P---ETLIIDCGADF 113 (352)
T ss_dssp HHHTTCSEEEECCTTSCCHHHHHHS-C---T---TSEEEECSSTT
T ss_pred HHhcCCCEEEECCCCcchHHHHHHH-h---C---CCEEEEECCCc
Confidence 3467899999999998777666655 2 2 56788777544
No 327
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=94.73 E-value=0.087 Score=56.14 Aligned_cols=51 Identities=20% Similarity=0.167 Sum_probs=40.4
Q ss_pred HHhHHHhhhhcCCCCC---CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 27 ERLDELRRLMGKAEGD---PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 27 ~~~~~~~~~~~~~~~~---~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
+|.+.-.+++|...+. ..+|+|||+|..|+.++..|+.. |. ..++++|.+.
T Consensus 13 ~rY~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~a-GV----g~itlvD~D~ 66 (531)
T 1tt5_A 13 QKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLP-GI----GSFTIIDGNQ 66 (531)
T ss_dssp HHTHHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTT-TC----SEEEEECCCB
T ss_pred HHhhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHc-CC----CeEEEEeCCE
Confidence 4777666677654333 26899999999999999999998 83 5899999875
No 328
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=94.61 E-value=0.16 Score=52.70 Aligned_cols=34 Identities=24% Similarity=0.358 Sum_probs=30.4
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
.||.|||+|..|+.++..|+.. |. .+++++|.+.
T Consensus 41 ~~VlvvG~GGlGs~va~~La~a-Gv----g~i~ivD~D~ 74 (434)
T 1tt5_B 41 CKVLVIGAGGLGCELLKNLALS-GF----RQIHVIDMDT 74 (434)
T ss_dssp CCEEEECSSTHHHHHHHHHHHT-TC----CCEEEEECCB
T ss_pred CEEEEECcCHHHHHHHHHHHHc-CC----CEEEEEcCCE
Confidence 5899999999999999999998 83 5799998875
No 329
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.57 E-value=0.048 Score=54.98 Aligned_cols=38 Identities=21% Similarity=0.330 Sum_probs=33.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
..+|.|+|+|.+|.+.+..+... | .+|++++|++++++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~-G-----a~V~v~dr~~~r~~ 204 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGL-G-----AQVQIFDINVERLS 204 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHH
Confidence 47999999999999999999887 7 78999999986554
No 330
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=94.41 E-value=0.051 Score=54.52 Aligned_cols=23 Identities=30% Similarity=0.572 Sum_probs=20.8
Q ss_pred CceEEEECccHHHHHHHHHHHHh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDS 65 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~ 65 (465)
++||+|||+|.+|+.++..+.++
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~ 25 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLER 25 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT
T ss_pred eeEEEEEcCCHHHHHHHHHHHhC
Confidence 47999999999999999998775
No 331
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=94.41 E-value=0.061 Score=54.44 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=25.6
Q ss_pred ceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 012349 44 LRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (465)
Q Consensus 44 mkIaIIG-aGamGsalA~~La~~~G~~~~~~~V~l~~r~ 81 (465)
+||+|+| .|.+|..+...|.+. . ..++..+...
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~-p----~~elvai~~~ 50 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANH-P----HFQVTLMTAD 50 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTC-S----SEEEEEEBCS
T ss_pred cEEEEECcCCHHHHHHHHHHHcC-C----CcEEEEEeCc
Confidence 6999999 799999999999876 3 2466655443
No 332
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=94.27 E-value=0.11 Score=51.90 Aligned_cols=23 Identities=26% Similarity=0.447 Sum_probs=20.8
Q ss_pred CceEEEECccHHHHHHHHHHHHh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDS 65 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~ 65 (465)
++||+|||+|.||+.++..|.++
T Consensus 4 ~irVgIiG~G~VG~~~~~~L~~~ 26 (325)
T 3ing_A 4 EIRIILMGTGNVGLNVLRIIDAS 26 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred eEEEEEEcCcHHHHHHHHHHHhc
Confidence 47999999999999999999764
No 333
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=94.27 E-value=0.036 Score=56.90 Aligned_cols=34 Identities=26% Similarity=0.308 Sum_probs=30.9
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
+++|+|||+|..|.++|..|++. | ++|+++++.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~-G-----~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQH-D-----VDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHT-T-----CEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-C-----CeEEEEcCCC
Confidence 36899999999999999999999 8 8999999875
No 334
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=94.24 E-value=0.051 Score=49.37 Aligned_cols=36 Identities=22% Similarity=0.276 Sum_probs=32.6
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhh
Q 012349 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (465)
Q Consensus 44 mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (465)
|||.|.|+ |.+|.+++..|++. | ++|++++|+++..
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~~~~ 37 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR-G-----HEVTAIVRNAGKI 37 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCSHHH
T ss_pred CeEEEEcCCchhHHHHHHHHHhC-C-----CEEEEEEcCchhh
Confidence 79999996 99999999999998 7 8999999998644
No 335
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=94.22 E-value=0.16 Score=50.66 Aligned_cols=23 Identities=13% Similarity=0.242 Sum_probs=20.7
Q ss_pred CceEEEECccHHHHHHHHHHHHh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDS 65 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~ 65 (465)
++||+|||+|.||..++..+.++
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~ 28 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSF 28 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred EEeEEEEecCHHHHHHHHHHHhC
Confidence 47999999999999999999765
No 336
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=94.14 E-value=0.054 Score=54.08 Aligned_cols=37 Identities=11% Similarity=0.074 Sum_probs=31.3
Q ss_pred CCCceEEEECccHH-HHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 41 GDPLRIVGVGAGAW-GSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 41 ~~~mkIaIIGaGam-GsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
-...+++|||+|.+ |..+|..|... | ..|++.+|+..
T Consensus 175 l~gk~vvVIG~G~iVG~~~A~~L~~~-g-----AtVtv~nR~~~ 212 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRPLAALLAND-G-----ATVYSVDVNNI 212 (320)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTT-S-----CEEEEECSSEE
T ss_pred CCCCEEEEECCCcchHHHHHHHHHHC-C-----CEEEEEeCchH
Confidence 34579999999976 99999999987 6 78999998853
No 337
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=94.12 E-value=0.097 Score=53.46 Aligned_cols=38 Identities=18% Similarity=0.287 Sum_probs=29.0
Q ss_pred HhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 157 AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 157 al~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
.+.++|+||+|+|...-.++.+.+.. . +..+|.++.-+
T Consensus 90 ~~~~~Dvvf~alp~~~s~~~~~~~~~---~---G~~VIDlSa~f 127 (381)
T 3hsk_A 90 NFLECDVVFSGLDADVAGDIEKSFVE---A---GLAVVSNAKNY 127 (381)
T ss_dssp TGGGCSEEEECCCHHHHHHHHHHHHH---T---TCEEEECCSTT
T ss_pred hcccCCEEEECCChhHHHHHHHHHHh---C---CCEEEEcCCcc
Confidence 35789999999999988888777643 3 56788877544
No 338
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=94.06 E-value=0.083 Score=50.40 Aligned_cols=38 Identities=24% Similarity=0.142 Sum_probs=31.7
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 44 mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
|||.|.|+ |.+|.+++..|.+..| ++|++.+|+++...
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g-----~~V~~~~R~~~~~~ 39 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHI-----DHFHIGVRNVEKVP 39 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC-----TTEEEEESSGGGSC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCC-----CcEEEEECCHHHHH
Confidence 68999996 9999999999987523 89999999986443
No 339
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=94.02 E-value=0.18 Score=52.43 Aligned_cols=45 Identities=18% Similarity=0.207 Sum_probs=29.1
Q ss_pred EecCHHHHhc--CCCEEEEecCc-chHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 150 VVTNLQEAVW--DADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 150 ~t~dl~eal~--~aDiVIlaVps-~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
.++|+++.+. +.|+|++++|+ ....+.+.+ .+.. +..|++.-|++
T Consensus 66 ~~~d~~ell~d~diDvVve~tp~~~~h~~~~~~---AL~a---GKhVvtenkal 113 (444)
T 3mtj_A 66 LTTNPFDVVDDPEIDIVVELIGGLEPARELVMQ---AIAN---GKHVVTANKHL 113 (444)
T ss_dssp EESCTHHHHTCTTCCEEEECCCSSTTHHHHHHH---HHHT---TCEEEECCHHH
T ss_pred ccCCHHHHhcCCCCCEEEEcCCCchHHHHHHHH---HHHc---CCEEEECCccc
Confidence 4677777775 47999999996 444444433 2333 56677776754
No 340
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=93.98 E-value=0.14 Score=53.86 Aligned_cols=53 Identities=19% Similarity=0.055 Sum_probs=41.3
Q ss_pred hHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchh
Q 012349 25 LEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (465)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (465)
-+.-+|-+++..++. -.-++++|+|+|.+|.++|..|+.. | .+|.++++++..
T Consensus 248 ~~sl~dgi~r~tg~~-L~GKtVvVtGaGgIG~aiA~~Laa~-G-----A~Viv~D~~~~~ 300 (488)
T 3ond_A 248 RHSLPDGLMRATDVM-IAGKVAVVAGYGDVGKGCAAALKQA-G-----ARVIVTEIDPIC 300 (488)
T ss_dssp HHHHHHHHHHHHCCC-CTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHH
T ss_pred cHHHHHHHHHHcCCc-ccCCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEcCCHHH
Confidence 344566777776652 2336899999999999999999988 8 799999998753
No 341
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=93.97 E-value=0.055 Score=57.94 Aligned_cols=48 Identities=17% Similarity=0.298 Sum_probs=38.0
Q ss_pred hHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 25 LEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
...|-+.+.+|.. ....|+|||+|..|.++|..|++. | .+|.++.++.
T Consensus 18 ~~~r~~~~~~m~~----~~~DVvVIGgGi~G~~~A~~La~r-G-----~~V~LlE~~~ 65 (571)
T 2rgh_A 18 NKTRQDSIQKMQQ----EELDLLIIGGGITGAGVAVQAAAS-G-----IKTGLIEMQD 65 (571)
T ss_dssp HHHHHHHHHHHHH----SCBSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred ccCHHHHHHhccc----CCCCEEEECcCHHHHHHHHHHHHC-C-----CcEEEEeCCC
Confidence 4556666666542 236899999999999999999999 8 8999998754
No 342
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=93.91 E-value=0.074 Score=51.83 Aligned_cols=38 Identities=18% Similarity=0.352 Sum_probs=33.0
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhh
Q 012349 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (465)
Q Consensus 42 ~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (465)
.+|||.|.|+ |.+|++++..|.+. | ++|++.+|++...
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~~ 50 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAA-G-----HDLVLIHRPSSQI 50 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHT-T-----CEEEEEECTTSCG
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHC-C-----CEEEEEecChHhh
Confidence 3479999996 99999999999998 7 8999999987543
No 343
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=93.82 E-value=0.04 Score=55.20 Aligned_cols=59 Identities=20% Similarity=0.104 Sum_probs=40.5
Q ss_pred eeEeecchhHHHhHHHhhhhcCCCCCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 17 LIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
-.+|++..-.-. +++++...|.. .+|+|.|.|+ |.+|..++..|.+. | ++|++.+|++.
T Consensus 5 ~~~~~~~~~~~~-~~~~~~~~~~~-~~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 64 (379)
T 2c5a_A 5 TTNGTDYGAYTY-KELEREQYWPS-ENLKISITGAGGFIASHIARRLKHE-G-----HYVIASDWKKN 64 (379)
T ss_dssp ----------CC-TTCCCCCSCTT-SCCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESSCC
T ss_pred ccCCcchhhhhH-HHHhccccccc-cCCeEEEECCccHHHHHHHHHHHHC-C-----CeEEEEECCCc
Confidence 345555444433 67777666654 5689999998 99999999999998 7 89999999864
No 344
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=93.81 E-value=0.061 Score=49.11 Aligned_cols=36 Identities=25% Similarity=0.289 Sum_probs=32.6
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhh
Q 012349 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (465)
Q Consensus 44 mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (465)
|||.|.|+ |.+|.+++..|++. | ++|++.+|+++..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~~~~ 37 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR-G-----HEVLAVVRDPQKA 37 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC-C-----CEEEEEEeccccc
Confidence 78999998 99999999999998 7 8999999987643
No 345
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=93.79 E-value=0.061 Score=54.16 Aligned_cols=36 Identities=19% Similarity=0.456 Sum_probs=32.2
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
..++|+|||+|..|.++|..|++. | .+|+++.+++.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~-G-----~~v~v~E~~~~ 60 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQN-G-----IDVSVYERDND 60 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-C-----CCEEEEeCCCC
Confidence 346899999999999999999998 7 89999998764
No 346
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=93.74 E-value=0.11 Score=50.25 Aligned_cols=46 Identities=17% Similarity=0.081 Sum_probs=32.1
Q ss_pred EEecCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 149 KVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 149 ~~t~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
.+++|+++.+.++|+|+.|.+++.+++...++ |.. +.-+++.+-|.
T Consensus 49 ~a~~d~d~lla~pD~VVe~A~~~av~e~~~~i---L~a---G~dvv~~S~ga 94 (253)
T 1j5p_A 49 VVRLDEFQVPSDVSTVVECASPEAVKEYSLQI---LKN---PVNYIIISTSA 94 (253)
T ss_dssp SEECSSCCCCTTCCEEEECSCHHHHHHHHHHH---TTS---SSEEEECCGGG
T ss_pred eeeCCHHHHhhCCCEEEECCCHHHHHHHHHHH---HHC---CCCEEEcChhh
Confidence 35677777677899999999888776654444 444 45677777663
No 347
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=93.67 E-value=0.11 Score=54.36 Aligned_cols=45 Identities=13% Similarity=0.211 Sum_probs=33.1
Q ss_pred cCHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecccc
Q 012349 152 TNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (465)
Q Consensus 152 ~dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi~ 201 (465)
.++.++....|+++++||+....++++++... . -..++.++.|+.
T Consensus 56 ~sl~~lp~~~Dlavi~vp~~~~~~~v~e~~~~-G----i~~vv~~s~G~~ 100 (457)
T 2csu_A 56 KSVKDIPDEIDLAIIVVPKRFVKDTLIQCGEK-G----VKGVVIITAGFG 100 (457)
T ss_dssp SSTTSCSSCCSEEEECSCHHHHHHHHHHHHHH-T----CCEEEECCCSST
T ss_pred CCHHHcCCCCCEEEEecCHHHHHHHHHHHHHc-C----CCEEEEecCCCC
Confidence 33444445689999999999999999987654 1 135677888984
No 348
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=93.67 E-value=0.082 Score=51.24 Aligned_cols=35 Identities=20% Similarity=0.172 Sum_probs=31.3
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 42 ~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
++|+|.|.|+ |.+|.+++..|.+. | ++|++.+|++
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~ 38 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSF-S-----HPTFIYARPL 38 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHT-T-----CCEEEEECCC
T ss_pred cccEEEEEcCCchhHHHHHHHHHhC-C-----CcEEEEECCc
Confidence 3578999996 99999999999998 7 8999999986
No 349
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=93.66 E-value=0.065 Score=54.01 Aligned_cols=36 Identities=19% Similarity=0.335 Sum_probs=32.2
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
..++|+|||+|..|.++|..|++. | ++|+++.+++.
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~-G-----~~V~v~E~~~~ 57 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQS-G-----IDCDVYEAVKE 57 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-C-----CCEEEEeCCCC
Confidence 347899999999999999999999 8 89999999764
No 350
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=93.66 E-value=0.069 Score=47.30 Aligned_cols=34 Identities=18% Similarity=0.279 Sum_probs=30.9
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
++|+|||+|..|..+|..|++. | .+|+++++++.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-g-----~~v~lie~~~~ 35 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-G-----LKVLVLDGGRS 35 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECSCC
T ss_pred CeEEEECCCHHHHHHHHHHHHC-C-----CcEEEEeCCCC
Confidence 5899999999999999999998 7 89999998763
No 351
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=93.58 E-value=0.08 Score=50.84 Aligned_cols=35 Identities=26% Similarity=0.228 Sum_probs=31.6
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 43 ~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
+|+|.|+|+ |.+|.+++..|.+. | ++|++.+|+..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~l~R~~~ 39 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL-G-----HPTFLLVREST 39 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT-T-----CCEEEECCCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC-C-----CCEEEEECCcc
Confidence 578999997 99999999999998 7 89999999853
No 352
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=93.57 E-value=0.051 Score=55.89 Aligned_cols=35 Identities=20% Similarity=0.216 Sum_probs=31.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
..+|+|||+|..|.+.|..|++. | .+|+++++++.
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~-G-----~~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKR-G-----RRVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-C-----CcEEEEeCCCC
Confidence 35899999999999999999998 7 89999998864
No 353
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=93.56 E-value=0.25 Score=49.60 Aligned_cols=35 Identities=26% Similarity=0.376 Sum_probs=25.9
Q ss_pred hcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeec
Q 012349 158 VWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (465)
Q Consensus 158 l~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~k 198 (465)
+.++|+||+|+|.....++.+... .. +..||+++.
T Consensus 75 ~~~vDvVf~atp~~~s~~~a~~~~---~a---G~~VId~s~ 109 (350)
T 2ep5_A 75 HKDVDVVLSALPNELAESIELELV---KN---GKIVVSNAS 109 (350)
T ss_dssp GTTCSEEEECCCHHHHHHHHHHHH---HT---TCEEEECSS
T ss_pred hcCCCEEEECCChHHHHHHHHHHH---HC---CCEEEECCc
Confidence 578999999999887777666554 33 456887764
No 354
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=93.54 E-value=0.15 Score=51.69 Aligned_cols=38 Identities=29% Similarity=0.278 Sum_probs=28.8
Q ss_pred HhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 157 AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 157 al~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
.+.++|+||+|+|...-.++.+.+. +. +..+|.++.-+
T Consensus 76 ~~~~vDvvf~a~p~~~s~~~a~~~~---~~---G~~vIDlSa~~ 113 (359)
T 4dpk_A 76 LMDDVDIIFSPLPQGAAGPVEEQFA---KE---GFPVISNSPDH 113 (359)
T ss_dssp GCTTCCEEEECCCTTTHHHHHHHHH---HT---TCEEEECSSTT
T ss_pred HhcCCCEEEECCChHHHHHHHHHHH---HC---CCEEEEcCCCc
Confidence 3578999999999998888777664 33 56788777543
No 355
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=93.54 E-value=0.15 Score=51.69 Aligned_cols=38 Identities=29% Similarity=0.278 Sum_probs=28.8
Q ss_pred HhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 157 AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 157 al~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
.+.++|+||+|+|...-.++.+.+. +. +..+|.++.-+
T Consensus 76 ~~~~vDvvf~a~p~~~s~~~a~~~~---~~---G~~vIDlSa~~ 113 (359)
T 4dpl_A 76 LMDDVDIIFSPLPQGAAGPVEEQFA---KE---GFPVISNSPDH 113 (359)
T ss_dssp GCTTCCEEEECCCTTTHHHHHHHHH---HT---TCEEEECSSTT
T ss_pred HhcCCCEEEECCChHHHHHHHHHHH---HC---CCEEEEcCCCc
Confidence 3578999999999998888777664 33 56788777543
No 356
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=93.53 E-value=0.15 Score=48.99 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=31.1
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
+|+|.|.|+ |.+|.+++..|.+. | ++|++.+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~ 38 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL-G-----HPTYVLFRPE 38 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT-T-----CCEEEECCSC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC-C-----CcEEEEECCC
Confidence 578999996 99999999999998 7 8999999985
No 357
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=93.53 E-value=0.67 Score=50.37 Aligned_cols=34 Identities=26% Similarity=0.312 Sum_probs=30.8
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
.+|+|||+|+.|+.++..|+.. |. ..++++|.+.
T Consensus 18 s~VlVVGaGGLGsevak~La~a-GV----G~ItlvD~D~ 51 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLT-GF----SHIDLIDLDT 51 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TC----CEEEEEECCB
T ss_pred CeEEEECcCHHHHHHHHHHHHc-CC----CeEEEecCCE
Confidence 5899999999999999999999 83 5899999875
No 358
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=93.52 E-value=0.22 Score=56.95 Aligned_cols=52 Identities=12% Similarity=0.104 Sum_probs=39.2
Q ss_pred HHHhHHHhhhhcCCCCC---CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 26 EERLDELRRLMGKAEGD---PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 26 ~~~~~~~~~~~~~~~~~---~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
++|.+.-.+++|...+. ..+|+|||+|..|+.+|..|+.. |. ..++++|.+.
T Consensus 7 ~~rY~Rqi~l~G~~~q~rL~~s~VlIvG~GGlGseiak~La~a-GV----g~itlvD~D~ 61 (1015)
T 3cmm_A 7 ESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLA-GV----KSMTVFDPEP 61 (1015)
T ss_dssp HHHHHHHHHHSCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHH-CC----SEEEEECCSB
T ss_pred hHhccchHhhcCHHHHHHHhcCEEEEECCChHHHHHHHHHHHc-CC----CeEEEecCCE
Confidence 45566545555543222 36899999999999999999999 83 5899999875
No 359
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=93.52 E-value=0.3 Score=49.10 Aligned_cols=23 Identities=17% Similarity=0.309 Sum_probs=20.7
Q ss_pred CceEEEECccHHHHHHHHHHHHh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDS 65 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~ 65 (465)
|+||+|+|+|.+|..++..|..+
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~ 24 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQ 24 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHS
T ss_pred ceEEEEECCCHHHHHHHHHHHhC
Confidence 36999999999999999998765
No 360
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=93.51 E-value=0.065 Score=52.79 Aligned_cols=56 Identities=25% Similarity=0.291 Sum_probs=41.8
Q ss_pred Eeecchh--HHHhHHHhhhhcCCCCCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 19 HHTNGSL--EERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 19 ~~~~~~~--~~~~~~~~~~~~~~~~~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
||..||. +++...+.+.+.+ .+|+|.|.|+ |.+|.+++..|++. | ++|++.+|+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~---~~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 62 (352)
T 1sb8_A 4 HHHHGSMGMMSRYEELRKELPA---QPKVWLITGVAGFIGSNLLETLLKL-D-----QKVVGLDNFAT 62 (352)
T ss_dssp --------CCCHHHHHHHHHHH---SCCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCSS
T ss_pred cccccchHHHHHHHhhchhcCc---cCCeEEEECCCcHHHHHHHHHHHHC-C-----CEEEEEeCCCc
Confidence 5556664 6777777777765 4589999998 99999999999998 7 89999999753
No 361
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=93.50 E-value=0.18 Score=51.17 Aligned_cols=38 Identities=16% Similarity=0.038 Sum_probs=28.4
Q ss_pred HhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 157 AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 157 al~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
.+.++|+||+|+|...-.+..+.+. +. +..+|.++.-+
T Consensus 61 ~~~~~Dvvf~a~~~~~s~~~a~~~~---~~---G~~vIDlSa~~ 98 (366)
T 3pwk_A 61 AFEGVDIALFSAGSSTSAKYAPYAV---KA---GVVVVDNTSYF 98 (366)
T ss_dssp TTTTCSEEEECSCHHHHHHHHHHHH---HT---TCEEEECSSTT
T ss_pred HhcCCCEEEECCChHhHHHHHHHHH---HC---CCEEEEcCCcc
Confidence 3678999999999888777777654 33 56788887544
No 362
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=93.49 E-value=0.06 Score=53.37 Aligned_cols=35 Identities=17% Similarity=0.226 Sum_probs=31.4
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
...+|+|||+|..|.+.|..|++. | .+|++++++.
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~~-G-----~~V~llE~~~ 50 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAKE-N-----KNTALFESGT 50 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-C-----CcEEEEeCCC
Confidence 346899999999999999999998 8 8999999864
No 363
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=93.46 E-value=0.1 Score=50.06 Aligned_cols=34 Identities=21% Similarity=0.142 Sum_probs=31.3
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
+|+|.|.|+ |.+|.+++..|.+. | ++|++.+|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA-G-----NPTYALVRKT 36 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH-T-----CCEEEEECCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhC-C-----CcEEEEECCC
Confidence 478999997 99999999999998 7 8999999986
No 364
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=93.43 E-value=0.081 Score=51.93 Aligned_cols=47 Identities=17% Similarity=0.132 Sum_probs=37.4
Q ss_pred HhHHHhhhhcCCCCCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 28 RLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 28 ~~~~~~~~~~~~~~~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
+++|....|.+ .+|+|.|.|+ |.+|+.++..|.+. | ++|++.+|+..
T Consensus 13 ~~~~~~~~~~~---~~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 60 (351)
T 3ruf_A 13 RYEEITQQLIF---SPKTWLITGVAGFIGSNLLEKLLKL-N-----QVVIGLDNFST 60 (351)
T ss_dssp HHHHHHHHHHH---SCCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCSS
T ss_pred HHhhHHhhCCC---CCCeEEEECCCcHHHHHHHHHHHHC-C-----CEEEEEeCCCC
Confidence 44555555544 4579999996 99999999999998 7 89999999764
No 365
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=93.29 E-value=0.19 Score=52.66 Aligned_cols=39 Identities=18% Similarity=0.258 Sum_probs=30.0
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
.+||.|||+|.+|++++..++++ ..+.. .+|++.+.+..
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~-~dv~~-~~I~vaD~~~~ 51 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEK-FDIKP-SQVTIIAAEGT 51 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHH-BCCCG-GGEEEEESSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-CCCce-eEEEEeccchh
Confidence 47899999999999999999998 32110 26888877654
No 366
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=93.13 E-value=0.074 Score=51.62 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=30.5
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
++|+|||+|..|.++|..|++. | .+|.++.+++
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~-G-----~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAA-G-----HQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHC-C-----CcEEEEECCC
Confidence 5799999999999999999998 8 8999999875
No 367
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=93.09 E-value=0.092 Score=50.49 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=31.6
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 44 mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
|||.|.|+ |-+|+.++..|.++ | |+|+..+|++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~-G-----~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR-G-----HEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-C-----CEEEEEECCCC
Confidence 89999998 99999999999998 8 99999999864
No 368
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=93.01 E-value=0.073 Score=52.28 Aligned_cols=34 Identities=26% Similarity=0.558 Sum_probs=30.5
Q ss_pred CceEEEECccHHHHHHHHHHHH---hcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~---~~G~~~~~~~V~l~~r~~ 82 (465)
|++|+|||+|..|.+.|..|++ . | ++|++++++.
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~-G-----~~V~v~Ek~~ 37 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSG-P-----LYLAVWDKAD 37 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-C-C-----EEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccC-C-----ceEEEEECCC
Confidence 3689999999999999999999 7 7 8999998764
No 369
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=92.99 E-value=0.11 Score=51.29 Aligned_cols=34 Identities=26% Similarity=0.350 Sum_probs=30.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
...|+|||+|.+|.+.|..|++. | .+|+++++..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~-G-----~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARK-G-----YSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-C-----CEEEEEeccC
Confidence 46899999999999999999998 7 8999999753
No 370
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=92.86 E-value=0.086 Score=55.36 Aligned_cols=36 Identities=25% Similarity=0.351 Sum_probs=32.1
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
..++|+|||+|..|.++|..|++. | .+|.++.+.+.
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~-G-----~~v~vlE~~~~ 45 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLA-G-----VEVVVLERLVE 45 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEeCCCC
Confidence 346899999999999999999999 8 89999998764
No 371
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=92.86 E-value=0.2 Score=48.54 Aligned_cols=65 Identities=18% Similarity=0.048 Sum_probs=46.0
Q ss_pred CCCeeEeecchhHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012349 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (465)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (465)
.+|-++.+|-...--+.-|++.- . +-..+++.|+|+|.+|.++|..|++. + +|++++|+.+.++.
T Consensus 101 ~~g~l~g~nTd~~G~~~~L~~~~-~-~l~~k~vlV~GaGgiG~aia~~L~~~------G-~V~v~~r~~~~~~~ 165 (287)
T 1nvt_A 101 EDGKAIGYNTDGIGARMALEEEI-G-RVKDKNIVIYGAGGAARAVAFELAKD------N-NIIIANRTVEKAEA 165 (287)
T ss_dssp ETTEEEEECCHHHHHHHHHHHHH-C-CCCSCEEEEECCSHHHHHHHHHHTSS------S-EEEEECSSHHHHHH
T ss_pred eCCEEEEecCCHHHHHHHHHHhC-C-CcCCCEEEEECchHHHHHHHHHHHHC------C-CEEEEECCHHHHHH
Confidence 46766677766555555554421 1 12346899999999999999999876 4 89999998765543
No 372
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=92.76 E-value=0.15 Score=51.62 Aligned_cols=24 Identities=29% Similarity=0.430 Sum_probs=21.6
Q ss_pred CCceEEEECccHHHHHHHHHHHHh
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDS 65 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~ 65 (465)
+++||+|||+|.||+.++..+.+.
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~ 26 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAM 26 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHC
T ss_pred ceEEEEEEecCHHHHHHHHHHHhc
Confidence 458999999999999999999875
No 373
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=92.71 E-value=0.3 Score=48.86 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=25.4
Q ss_pred CceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEe
Q 012349 43 PLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWR 79 (465)
Q Consensus 43 ~mkIaIIG-aGamGsalA~~La~~~G~~~~~~~V~l~~ 79 (465)
+|||+|+| .|.+|..+...|.++ + | +..++..+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~-~-~-p~~elv~i~ 37 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQER-E-F-PVDELFLLA 37 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT-T-C-CEEEEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcC-C-C-CCEEEEEEE
Confidence 58999999 899999999998876 2 1 114555554
No 374
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=92.63 E-value=0.11 Score=53.31 Aligned_cols=38 Identities=26% Similarity=0.298 Sum_probs=32.2
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 40 ~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
.-...||+|+|+|+-|+++|..+... |. .+|+++|++.
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~-Ga----~~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAA-GA----TKVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHH-TC----CEEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHc-CC----CeEEEEECCC
Confidence 44457999999999999999999987 82 3899999974
No 375
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=92.49 E-value=0.11 Score=52.56 Aligned_cols=33 Identities=33% Similarity=0.422 Sum_probs=30.6
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
|+|+|||+|..|.+.|..|++. | ++|+++.+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~-G-----~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARN-G-----HEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-T-----CEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHC-C-----CeEEEEeCCC
Confidence 6899999999999999999999 8 8999998865
No 376
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=92.46 E-value=0.1 Score=47.76 Aligned_cols=36 Identities=25% Similarity=0.265 Sum_probs=32.2
Q ss_pred ceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhh
Q 012349 44 LRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (465)
Q Consensus 44 mkIaIIG-aGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (465)
|||.|.| +|.+|.+++..|++. | ++|++.+|+++..
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~~~~ 37 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT-D-----YQIYAGARKVEQV 37 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS-S-----CEEEEEESSGGGS
T ss_pred CeEEEECCCCHHHHHHHHHHHHC-C-----CEEEEEECCccch
Confidence 6999999 699999999999988 7 8999999997543
No 377
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.37 E-value=0.31 Score=48.23 Aligned_cols=35 Identities=14% Similarity=0.039 Sum_probs=31.2
Q ss_pred CCceEEEECccHHHHH-HHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 42 ~~mkIaIIGaGamGsa-lA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
.++||.|||.|..|.+ +|..|.+. | ++|+++|+++
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~-G-----~~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEA-G-----FEVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHT-T-----CEEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhC-C-----CEEEEEcCCC
Confidence 4689999999999995 89999888 8 9999999875
No 378
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=92.35 E-value=0.18 Score=49.22 Aligned_cols=33 Identities=12% Similarity=0.165 Sum_probs=27.7
Q ss_pred CCceEEEECccH-HHHHHHHHHHHhcCCCCCCeeEEEEec
Q 012349 42 DPLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRR 80 (465)
Q Consensus 42 ~~mkIaIIGaGa-mGsalA~~La~~~G~~~~~~~V~l~~r 80 (465)
.-++++|||.|. +|..+|..|... | ..|++..+
T Consensus 149 ~Gk~vvVvG~s~iVG~plA~lL~~~-g-----AtVtv~~~ 182 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRPLSMMLLNR-N-----YTVSVCHS 182 (276)
T ss_dssp CSCEEEEECCCTTTHHHHHHHHHHT-T-----CEEEEECT
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHC-C-----CeEEEEeC
Confidence 347999999885 899999999988 6 78988854
No 379
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=92.30 E-value=0.1 Score=51.26 Aligned_cols=33 Identities=18% Similarity=0.238 Sum_probs=30.2
Q ss_pred eEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 45 RIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 45 kIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
-|+|||+|.-|++.|..|+++ | ++|+++.+.++
T Consensus 6 DViIVGaGpaGl~~A~~La~~-G-----~~V~v~Er~~~ 38 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKY-G-----LKTLMIEKRPE 38 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC-C-----CcEEEEeCCCC
Confidence 499999999999999999999 8 89999998753
No 380
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=92.29 E-value=0.16 Score=45.41 Aligned_cols=35 Identities=23% Similarity=0.229 Sum_probs=32.1
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchh
Q 012349 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (465)
Q Consensus 44 mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (465)
|+|.|.|+ |.+|.+++..|.+. | ++|++++|+++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~-g-----~~V~~~~r~~~~ 39 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA-G-----YEVTVLVRDSSR 39 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-T-----CEEEEEESCGGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC-C-----CeEEEEEeChhh
Confidence 79999998 99999999999998 7 899999998753
No 381
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=92.25 E-value=0.23 Score=55.31 Aligned_cols=34 Identities=24% Similarity=0.358 Sum_probs=30.6
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
.||+|||+|..|+.++..|++. |. .+++++|.+.
T Consensus 412 ~~vlvvG~GglG~~~~~~L~~~-Gv----g~i~l~D~d~ 445 (805)
T 2nvu_B 412 CKVLVIGAGGLGCELLKNLALS-GF----RQIHVIDMDT 445 (805)
T ss_dssp CCEEEECCSSHHHHHHHHHHTT-TC----CEEEEEECCB
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CC----CcEEEECCCe
Confidence 5899999999999999999998 83 5899999875
No 382
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=92.17 E-value=0.14 Score=48.87 Aligned_cols=33 Identities=9% Similarity=-0.030 Sum_probs=30.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~ 81 (465)
+++|+|||+|.-|.+.|..|++. | ++|++++++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARY-M-----LKTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHHC-C-----CcEEEEecc
Confidence 46899999999999999999998 7 899999986
No 383
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=92.15 E-value=0.15 Score=51.27 Aligned_cols=35 Identities=31% Similarity=0.449 Sum_probs=31.9
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
.++|+|||+|..|.++|..|++. | .+|+++.+.+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~-G-----~~v~v~E~~~~ 39 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDA-G-----VDVDVYERSPQ 39 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhC-C-----CCEEEEecCCC
Confidence 46899999999999999999998 8 89999998764
No 384
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=92.14 E-value=0.13 Score=51.06 Aligned_cols=34 Identities=24% Similarity=0.262 Sum_probs=30.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
.++|+|||+|..|.+.|..|++. | ++|++++++.
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~-G-----~~V~vie~~~ 36 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQ-G-----VKTLLVDAFD 36 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-C-----CeEEEEeCCC
Confidence 35899999999999999999998 7 8999998864
No 385
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=92.09 E-value=0.13 Score=51.75 Aligned_cols=33 Identities=27% Similarity=0.428 Sum_probs=30.6
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
|+|+|||+|..|.+.|..|+++ | ++|+++.++.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~-G-----~~V~vlE~~~ 33 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKA-G-----HEVEVFERLP 33 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT-T-----CEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhC-C-----CceEEEeCCC
Confidence 6899999999999999999999 8 8999998865
No 386
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=92.08 E-value=0.15 Score=48.22 Aligned_cols=34 Identities=12% Similarity=0.042 Sum_probs=30.4
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
+.+|+|||+|.-|.+.|..|++. | ++|+++++++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA-R-----KNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-C-----CCEEEEeCCC
Confidence 36899999999999999999998 7 8999999753
No 387
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=92.07 E-value=0.13 Score=51.27 Aligned_cols=54 Identities=19% Similarity=0.169 Sum_probs=34.1
Q ss_pred hHHHhHHHhhhhcCCCCCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 25 LEERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
+--|-+-+.+.|......+|+|.|.|+ |.+|.+++..|.+. | .++|++++|+..
T Consensus 14 ~~~~~~~m~~~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~-g----~~~V~~~~r~~~ 68 (377)
T 2q1s_A 14 LVPRGSHMPVIMNASKLANTNVMVVGGAGFVGSNLVKRLLEL-G----VNQVHVVDNLLS 68 (377)
T ss_dssp ------------CCGGGTTCEEEEETTTSHHHHHHHHHHHHT-T----CSEEEEECCCTT
T ss_pred cccccccCCCCCChHHhCCCEEEEECCccHHHHHHHHHHHHc-C----CceEEEEECCCC
Confidence 444555565655544445689999996 99999999999988 5 168999998764
No 388
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=92.05 E-value=0.13 Score=50.11 Aligned_cols=33 Identities=18% Similarity=0.281 Sum_probs=30.7
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
.+|+|||+|..|.+.|..|++. | ++|+++++++
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~-G-----~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAG-G-----HEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-C-----CeEEEEeCCC
Confidence 5899999999999999999998 8 8999999874
No 389
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=91.99 E-value=0.27 Score=48.16 Aligned_cols=32 Identities=22% Similarity=0.311 Sum_probs=27.2
Q ss_pred CceEEEECccH-HHHHHHHHHHHhcCCCCCCeeEEEEec
Q 012349 43 PLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRR 80 (465)
Q Consensus 43 ~mkIaIIGaGa-mGsalA~~La~~~G~~~~~~~V~l~~r 80 (465)
-++++|||.|. +|..+|..|... | ..|++..+
T Consensus 160 Gk~vvVvGrs~iVG~p~A~lL~~~-g-----AtVtv~h~ 192 (285)
T 3p2o_A 160 GKDAVIIGASNIVGRPMATMLLNA-G-----ATVSVCHI 192 (285)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHT-T-----CEEEEECT
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-C-----CeEEEEeC
Confidence 47999999887 699999999988 6 78888754
No 390
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=91.98 E-value=0.15 Score=53.94 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=31.1
Q ss_pred CCceEEEECccHHHHHHHHHHHH---hcCCCCCCeeEEEEecCc
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~---~~G~~~~~~~V~l~~r~~ 82 (465)
..++|+|||+|..|.+.|..|++ . | .+|+|+.+.+
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~-G-----~~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQG-T-----ADITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTT-S-----SEEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCC-C-----CcEEEEeCCC
Confidence 35689999999999999999999 7 6 8999999864
No 391
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=91.97 E-value=0.15 Score=51.65 Aligned_cols=34 Identities=24% Similarity=0.395 Sum_probs=30.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~-~V~l~~r~~ 82 (465)
...|+|||+|..|.+.|..|++. | . +|+++.++.
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~-G-----~~~V~vlE~~~ 40 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARR-G-----YTNVTVLDPYP 40 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT-T-----CCCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHc-C-----CCcEEEEeCCC
Confidence 35799999999999999999999 8 7 899998865
No 392
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=91.81 E-value=0.46 Score=46.54 Aligned_cols=33 Identities=21% Similarity=0.268 Sum_probs=27.3
Q ss_pred CCceEEEECccH-HHHHHHHHHHHhcCCCCCCeeEEEEec
Q 012349 42 DPLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRR 80 (465)
Q Consensus 42 ~~mkIaIIGaGa-mGsalA~~La~~~G~~~~~~~V~l~~r 80 (465)
.-++++|||.|. +|..+|..|... | ..|++..+
T Consensus 160 ~Gk~vvVIG~s~iVG~p~A~lL~~~-g-----AtVtv~hs 193 (285)
T 3l07_A 160 EGAYAVVVGASNVVGKPVSQLLLNA-K-----ATVTTCHR 193 (285)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHT-T-----CEEEEECT
T ss_pred CCCEEEEECCCchhHHHHHHHHHHC-C-----CeEEEEeC
Confidence 347899999887 799999999988 6 68887754
No 393
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=91.78 E-value=0.12 Score=49.92 Aligned_cols=35 Identities=9% Similarity=0.061 Sum_probs=31.4
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
++++|+|||+|.-|.+.|..|++. | ++|+++++.+
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~vie~~~ 55 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARA-E-----IKPILYEGMM 55 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-T-----CCCEEECCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEecCC
Confidence 457899999999999999999998 7 8999999854
No 394
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=91.70 E-value=0.12 Score=50.95 Aligned_cols=33 Identities=12% Similarity=0.188 Sum_probs=30.3
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
.+|+|||+|..|.+.|..|++. | .+|++++++.
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~-G-----~~V~vle~~~ 35 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRA-G-----LNVLMTDAHM 35 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHT-T-----CCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHC-C-----CeEEEEecCC
Confidence 5799999999999999999999 8 8999999864
No 395
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=91.69 E-value=0.12 Score=53.51 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=30.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
|++|+|||+|--|.+-|..|+++ | ++|+++.++.
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~-G-----~~V~VlEa~~ 34 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAA-G-----IPVLLLEQRD 34 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHT-T-----CCEEEECCC-
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-C-----CcEEEEccCC
Confidence 57899999999999999999999 8 8999998764
No 396
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=91.63 E-value=0.27 Score=47.56 Aligned_cols=38 Identities=18% Similarity=0.196 Sum_probs=33.0
Q ss_pred CceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 43 PLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 43 ~mkIaIIG-aGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
.+++.|+| +|.+|.+++..|++. | .+|++++|+.+..+
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~-G-----~~V~i~~R~~~~~~ 157 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGE-G-----AEVVLCGRKLDKAQ 157 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHT-T-----CEEEEEESSHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-c-----CEEEEEECCHHHHH
Confidence 36899999 899999999999998 7 78999999876544
No 397
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=91.62 E-value=0.16 Score=51.26 Aligned_cols=35 Identities=9% Similarity=0.048 Sum_probs=30.8
Q ss_pred CceEEEECccHHHHHHHHHHHH---hcCCCCCCeeEEEEecCch
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~---~~G~~~~~~~V~l~~r~~~ 83 (465)
|++|+|||+|.-|.+.|..|++ . | ++|+++++++.
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~-g-----~~V~vie~~~~ 38 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGS-K-----ADVKVINKSRF 38 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGG-G-----SEEEEEESSSE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCC-C-----CeEEEEeCCCC
Confidence 4689999999999999999998 6 5 89999998763
No 398
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=91.60 E-value=0.41 Score=48.10 Aligned_cols=38 Identities=13% Similarity=-0.001 Sum_probs=28.6
Q ss_pred HhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 157 AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 157 al~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
.+.++|+||+|+|....++..+.+. +. +..+|.++.-+
T Consensus 60 ~~~~~Dvvf~a~~~~~s~~~a~~~~---~~---G~~vID~Sa~~ 97 (344)
T 3tz6_A 60 DPSGLDIALFSAGSAMSKVQAPRFA---AA---GVTVIDNSSAW 97 (344)
T ss_dssp CCTTCSEEEECSCHHHHHHHHHHHH---HT---TCEEEECSSTT
T ss_pred HhccCCEEEECCChHHHHHHHHHHH---hC---CCEEEECCCcc
Confidence 3578999999999988887777664 33 56788877543
No 399
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=91.60 E-value=0.22 Score=49.28 Aligned_cols=56 Identities=14% Similarity=0.167 Sum_probs=32.7
Q ss_pred EeecchhHHHhHHHhhhhcCCCCCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhh
Q 012349 19 HHTNGSLEERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (465)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (465)
||.-|.+++--..... -.+|||.|.|+ |.+|+.++..|.+..| ++|++++|+.+..
T Consensus 6 ~~~~~~~~~~~~~~~~------m~~~~vlVtGatG~iG~~l~~~L~~~~g-----~~V~~~~r~~~~~ 62 (372)
T 3slg_A 6 HHHMGTLEAQTQGPGS------MKAKKVLILGVNGFIGHHLSKRILETTD-----WEVFGMDMQTDRL 62 (372)
T ss_dssp -----------------------CCCEEEEESCSSHHHHHHHHHHHHHSS-----CEEEEEESCCTTT
T ss_pred cccccchhhhhcCCcc------cCCCEEEEECCCChHHHHHHHHHHhCCC-----CEEEEEeCChhhh
Confidence 4556666654333222 24579999995 9999999999988623 8999999987544
No 400
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=91.55 E-value=0.23 Score=49.09 Aligned_cols=33 Identities=21% Similarity=0.238 Sum_probs=28.2
Q ss_pred CceEEEECccH-HHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 012349 43 PLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (465)
Q Consensus 43 ~mkIaIIGaGa-mGsalA~~La~~~G~~~~~~~V~l~~r~ 81 (465)
-++++|||.|. +|..+|..|... | .+|++..+.
T Consensus 165 Gk~vvVIG~s~iVG~p~A~lL~~~-g-----AtVtv~~~~ 198 (300)
T 4a26_A 165 GKRAVVLGRSNIVGAPVAALLMKE-N-----ATVTIVHSG 198 (300)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHT-T-----CEEEEECTT
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-C-----CeEEEEeCC
Confidence 47999999877 799999999988 6 789988763
No 401
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=91.50 E-value=0.38 Score=47.45 Aligned_cols=33 Identities=15% Similarity=0.116 Sum_probs=27.8
Q ss_pred CCceEEEECccH-HHHHHHHHHHHhcCCCCCCeeEEEEec
Q 012349 42 DPLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRR 80 (465)
Q Consensus 42 ~~mkIaIIGaGa-mGsalA~~La~~~G~~~~~~~V~l~~r 80 (465)
..++++|||+|. +|..+|..|... | ..|++..+
T Consensus 164 ~gk~vvVIG~s~iVG~p~A~lL~~~-g-----AtVtv~hs 197 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAPMHDLLLWN-N-----ATVTTCHS 197 (301)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHT-T-----CEEEEECT
T ss_pred CCCEEEEECCCchHHHHHHHHHHhC-C-----CeEEEEEC
Confidence 457999999996 799999999987 6 78888753
No 402
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=91.50 E-value=0.17 Score=51.88 Aligned_cols=35 Identities=26% Similarity=0.365 Sum_probs=31.2
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCe--eEEEEecCc
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPG 82 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~--~V~l~~r~~ 82 (465)
..++|+|||+|..|.+.|..|++. | . +|+++.+++
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~-G-----~~~~V~v~E~~~ 41 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE-K-----AFDQVTLFERRG 41 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-T-----CCSEEEEECSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc-C-----CCCCeEEEecCC
Confidence 347899999999999999999998 7 6 899999875
No 403
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=91.36 E-value=0.17 Score=50.16 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=30.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
..+|+|||+|..|.+.|..|++. | ++|++++++.
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~-G-----~~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKR-G-----EEVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-C-----CeEEEEeCCC
Confidence 35799999999999999999998 7 8999999864
No 404
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=91.35 E-value=0.14 Score=54.35 Aligned_cols=35 Identities=14% Similarity=0.139 Sum_probs=31.5
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
..+|+|||+|..|.++|..|++. | .+|+++++.+.
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~-G-----~~V~vlEr~~~ 60 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHR-Q-----VGHLVVEQTDG 60 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEeCCCC
Confidence 35799999999999999999998 8 89999998764
No 405
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=91.32 E-value=0.45 Score=47.57 Aligned_cols=23 Identities=30% Similarity=0.683 Sum_probs=20.4
Q ss_pred CceEEEEC-ccHHHHHHHHHHHHh
Q 012349 43 PLRIVGVG-AGAWGSVFTAMLQDS 65 (465)
Q Consensus 43 ~mkIaIIG-aGamGsalA~~La~~ 65 (465)
+|||+|+| .|.+|..+...|.++
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~ 29 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDER 29 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT
T ss_pred CcEEEEECCCCHHHHHHHHHHHhC
Confidence 47999999 699999999999865
No 406
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=91.32 E-value=0.82 Score=38.73 Aligned_cols=35 Identities=17% Similarity=0.144 Sum_probs=26.3
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEE-EecC
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRI-WRRP 81 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l-~~r~ 81 (465)
+..++.|+|+|..|..++..+.++.| ++|.. ++.+
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g-----~~vvg~~d~~ 38 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKE-----FHPIAFIDDD 38 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSS-----EEEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-----cEEEEEEECC
Confidence 45689999999999999999976523 66554 4443
No 407
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=91.26 E-value=0.17 Score=50.57 Aligned_cols=34 Identities=24% Similarity=0.377 Sum_probs=31.2
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
.+|+|||+|..|.++|..|++. | ++|+++.+.+.
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-G-----~~v~v~E~~~~ 36 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-G-----IDNVILERQTP 36 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-T-----CCEEEECSSCH
T ss_pred ccEEEECCCHHHHHHHHHHHHC-C-----CCEEEEeCCCC
Confidence 4799999999999999999999 8 89999998764
No 408
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=91.25 E-value=0.16 Score=52.06 Aligned_cols=34 Identities=15% Similarity=0.132 Sum_probs=30.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCe--eEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~--~V~l~~r~~ 82 (465)
+++|+|||+|..|.+.|..|++. | + +|+++..++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~-G-----~~~~V~vlEa~~ 37 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRA-P-----CPPKVVLVESSE 37 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTS-S-----SCCEEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHhC-C-----CCCcEEEEeCCC
Confidence 46899999999999999999998 7 7 999998754
No 409
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=91.13 E-value=0.23 Score=47.34 Aligned_cols=38 Identities=18% Similarity=0.232 Sum_probs=32.1
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 43 ~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
.++|.|.|+ |.+|.+++..|++. | ++|.+.+|+++..+
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~-G-----~~V~~~~r~~~~~~ 70 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQ-G-----LKVVGCARTVGNIE 70 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-C-----CEEEEEECChHHHH
Confidence 357889986 89999999999998 8 89999999876443
No 410
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=91.08 E-value=0.2 Score=49.84 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=31.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
.++|+|||+|..|.++|..|++. | .+|+++++++.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~-G-----~~v~viE~~~~ 45 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN-G-----WDVRLHEKSSE 45 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-C-----CCEEEEecCCC
Confidence 36899999999999999999998 7 89999998764
No 411
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=91.07 E-value=0.32 Score=47.72 Aligned_cols=33 Identities=24% Similarity=0.214 Sum_probs=27.8
Q ss_pred CCceEEEECccH-HHHHHHHHHHHhcCCCCCCeeEEEEec
Q 012349 42 DPLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRR 80 (465)
Q Consensus 42 ~~mkIaIIGaGa-mGsalA~~La~~~G~~~~~~~V~l~~r 80 (465)
..++++|||+|. +|..+|..|... | ..|++..+
T Consensus 158 ~gk~vvVIG~s~iVG~p~A~lL~~~-g-----AtVtv~hs 191 (288)
T 1b0a_A 158 FGLNAVVIGASNIVGRPMSMELLLA-G-----CTTTVTHR 191 (288)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTT-T-----CEEEEECS
T ss_pred CCCEEEEECCChHHHHHHHHHHHHC-C-----CeEEEEeC
Confidence 457999999996 699999999987 6 78888754
No 412
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=91.02 E-value=0.41 Score=50.25 Aligned_cols=35 Identities=31% Similarity=0.386 Sum_probs=32.3
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 43 ~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
+|||.|.|+ |.+|+.++..|.+. | ++|+..+|++.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~-G-----~~V~~l~R~~~ 182 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTG-G-----HEVIQLVRKEP 182 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT-T-----CEEEEEESSSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-C-----CEEEEEECCCC
Confidence 789999995 99999999999998 7 89999999875
No 413
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=90.99 E-value=0.2 Score=48.53 Aligned_cols=33 Identities=15% Similarity=0.159 Sum_probs=30.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~ 81 (465)
+.+|+|||+|.-|.+.|..|++. | ++|++++++
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRA-Q-----LSTLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHc-C-----CcEEEEeCC
Confidence 35799999999999999999998 7 899999987
No 414
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=90.99 E-value=0.32 Score=48.69 Aligned_cols=23 Identities=22% Similarity=0.245 Sum_probs=21.0
Q ss_pred CceEEEECccHHHHHHHHHHHHh
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDS 65 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~ 65 (465)
++||+|+|+|.+|..++..+.++
T Consensus 3 ~ikVgI~G~G~iGr~~~R~l~~~ 25 (335)
T 1u8f_O 3 KVKVGVNGFGRIGRLVTRAAFNS 25 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH
T ss_pred ceEEEEEccCHHHHHHHHHHHcC
Confidence 36999999999999999999876
No 415
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=90.98 E-value=0.34 Score=47.46 Aligned_cols=32 Identities=25% Similarity=0.268 Sum_probs=26.8
Q ss_pred CceEEEECccH-HHHHHHHHHHHhcCCCCCCeeEEEEec
Q 012349 43 PLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRR 80 (465)
Q Consensus 43 ~mkIaIIGaGa-mGsalA~~La~~~G~~~~~~~V~l~~r 80 (465)
-++++|||.|. .|..+|..|... | ..|++..+
T Consensus 161 Gk~vvVvGrs~iVG~plA~lL~~~-g-----AtVtv~hs 193 (286)
T 4a5o_A 161 GMDAVVVGASNIVGRPMALELLLG-G-----CTVTVTHR 193 (286)
T ss_dssp TCEEEEECTTSTTHHHHHHHHHHT-T-----CEEEEECT
T ss_pred CCEEEEECCCchhHHHHHHHHHHC-C-----CeEEEEeC
Confidence 47999999876 899999999988 6 78888744
No 416
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=90.96 E-value=0.44 Score=54.53 Aligned_cols=56 Identities=18% Similarity=0.150 Sum_probs=42.9
Q ss_pred HHHhHHHhhhhcCCCCC---CceEEEECccHHHHHHHHHHHHhcCC-CCCCeeEEEEecCc
Q 012349 26 EERLDELRRLMGKAEGD---PLRIVGVGAGAWGSVFTAMLQDSYGY-LRDKVLIRIWRRPG 82 (465)
Q Consensus 26 ~~~~~~~~~~~~~~~~~---~mkIaIIGaGamGsalA~~La~~~G~-~~~~~~V~l~~r~~ 82 (465)
.+|.+...+++|...+. ..||+|||+|+.|+.++..|+.. |. ..++.+++++|.+.
T Consensus 405 ~~Ry~rq~~l~G~~~q~kL~~~~VlvVGaGGlGsevlk~La~~-Gv~~g~~G~i~lvD~D~ 464 (1015)
T 3cmm_A 405 NSRYDNQIAVFGLDFQKKIANSKVFLVGSGAIGCEMLKNWALL-GLGSGSDGYIVVTDNDS 464 (1015)
T ss_dssp SSTTHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHH-TTTCSTTCEEEEECCCB
T ss_pred hhhhhhHHHhcCHHHHHHHhcCeEEEEecCHHHHHHHHHHHHc-CcCcCCCCeEEEEeCCE
Confidence 46888888888765443 36899999999999999999999 83 11113799999875
No 417
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=90.94 E-value=0.29 Score=51.29 Aligned_cols=37 Identities=19% Similarity=0.155 Sum_probs=32.6
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 41 ~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
....+|+|||+|..|.++|..|++. | .+|+++.+++.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~-G-----~~V~liEk~~~ 126 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALL-G-----ARVVLVEKRIK 126 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCSS
T ss_pred cCCCCEEEECccHHHHHHHHHHHHC-C-----CeEEEEEeccc
Confidence 3457899999999999999999998 8 89999998753
No 418
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=90.91 E-value=0.2 Score=49.12 Aligned_cols=38 Identities=18% Similarity=0.252 Sum_probs=30.1
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCC-CCCeeEEEEecCc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYL-RDKVLIRIWRRPG 82 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~-~~~~~V~l~~r~~ 82 (465)
|+|+|||+|..|.+.|..|+++ |.- .++.+|++++++.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~-G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHER-YHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-HTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHh-ccccCCCceEEEEECCC
Confidence 6899999999999999999998 400 0016899999874
No 419
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=90.84 E-value=0.2 Score=50.07 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=30.5
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
..|+|||+|..|.+.|..|++. | .+|+++++..
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~-G-----~~V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAER-G-----HRVLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHC-C-----CeEEEEeCCC
Confidence 5799999999999999999999 8 8999999865
No 420
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=90.84 E-value=1.2 Score=44.92 Aligned_cols=43 Identities=16% Similarity=0.241 Sum_probs=29.2
Q ss_pred CHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 153 NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 153 dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
+.++ +.++|+||.|+|.....+..+.+.. .+. +.+||+++.-+
T Consensus 59 ~~~~-~~~~DvVf~a~g~~~s~~~a~~~~~---~G~-k~vVID~ss~~ 101 (367)
T 1t4b_A 59 DLEA-LKALDIIVTCQGGDYTNEIYPKLRE---SGW-QGYWIDAASSL 101 (367)
T ss_dssp CHHH-HHTCSEEEECSCHHHHHHHHHHHHH---TTC-CCEEEECSSTT
T ss_pred ChHH-hcCCCEEEECCCchhHHHHHHHHHH---CCC-CEEEEcCChhh
Confidence 4444 5789999999998888777776643 210 23788877443
No 421
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=90.80 E-value=1.4 Score=44.77 Aligned_cols=42 Identities=17% Similarity=0.195 Sum_probs=29.0
Q ss_pred CHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecc
Q 012349 153 NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 153 dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kG 199 (465)
+.+ .+.++|+||+|+|.....+..+.+.. .+. +..||+++.-
T Consensus 58 ~~~-~~~~~Dvvf~a~~~~~s~~~~~~~~~---~G~-k~~VID~ss~ 99 (370)
T 3pzr_A 58 DIE-SLKQLDAVITCQGGSYTEKVYPALRQ---AGW-KGYWIDAAST 99 (370)
T ss_dssp CHH-HHTTCSEEEECSCHHHHHHHHHHHHH---TTC-CCEEEECSST
T ss_pred Chh-HhccCCEEEECCChHHHHHHHHHHHH---CCC-CEEEEeCCch
Confidence 443 36899999999999888887776543 210 2478887743
No 422
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=90.77 E-value=0.32 Score=51.19 Aligned_cols=35 Identities=26% Similarity=0.160 Sum_probs=31.8
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
..++|+|||+|.-|.+.|..|++. | ++|+++++++
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-G-----~~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-G-----GRQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-C-----CCEEEEeCCC
Confidence 347899999999999999999998 7 8999999886
No 423
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=90.73 E-value=0.23 Score=50.14 Aligned_cols=34 Identities=29% Similarity=0.405 Sum_probs=31.1
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
|+|+|||+|..|.+.|..|++. | ++|+++.+++.
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~-g-----~~v~v~E~~~~ 37 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEK-G-----HQVHIIDQRDH 37 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-T-----CEEEEEESSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CcEEEEEecCC
Confidence 7999999999999999999988 7 89999998753
No 424
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=90.70 E-value=0.18 Score=50.69 Aligned_cols=33 Identities=24% Similarity=0.516 Sum_probs=30.5
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
.+|+|||+|..|.+.|..|++. | .+|+++.+++
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~-G-----~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKS-G-----FKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhC-C-----CCEEEEeCCC
Confidence 6899999999999999999998 7 8999999874
No 425
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=90.68 E-value=0.26 Score=48.24 Aligned_cols=36 Identities=28% Similarity=0.211 Sum_probs=31.6
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 42 ~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
.+|+|.|.|+ |.+|..++..|.+. | ++|++.+|+..
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 62 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMD-G-----HEVTVVDNFFT 62 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCSS
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHC-C-----CEEEEEeCCCc
Confidence 5689999998 99999999999998 7 89999998753
No 426
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=90.65 E-value=0.2 Score=52.23 Aligned_cols=34 Identities=18% Similarity=0.210 Sum_probs=29.5
Q ss_pred CceEEEECccHHHHHHHHHHHH---hcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~---~~G~~~~~~~V~l~~r~~ 82 (465)
+++|+|||+|..|.+.|..|++ . | .+|+|+.+.+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~-G-----~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDD-R-----IDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGG-G-----SEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCC-C-----CEEEEEecCC
Confidence 3689999999999999999999 8 7 8999998864
No 427
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=90.54 E-value=0.22 Score=49.38 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=31.1
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
..|+|||+|..|.+.|..|++. | .+|+++++++.
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~-G-----~~V~l~E~~~~ 38 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKY-G-----LKTLMIEKRPE 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEeCCCC
Confidence 4799999999999999999998 8 89999999763
No 428
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=90.36 E-value=0.22 Score=49.83 Aligned_cols=35 Identities=17% Similarity=0.323 Sum_probs=31.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
.++|+|||+|..|.++|..|++. | .+|+++++++.
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~-G-----~~V~viE~~~~ 40 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQ-G-----HRVVVVEQARR 40 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-C-----CcEEEEeCCCC
Confidence 36899999999999999999998 7 89999998754
No 429
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=90.34 E-value=0.22 Score=51.25 Aligned_cols=35 Identities=11% Similarity=0.264 Sum_probs=31.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
...|+|||+|..|.+.|..|++. | .+|+++++.+.
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~-G-----~~V~llEk~~~ 60 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEE-G-----ANVLLLDKGNK 60 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-C-----CCEEEEECCCC
Confidence 35799999999999999999998 7 89999998763
No 430
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=90.34 E-value=0.17 Score=53.20 Aligned_cols=33 Identities=18% Similarity=0.336 Sum_probs=30.8
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
..|+|||+|..|.+.|..|+++ | ++|.++.+++
T Consensus 21 ~dv~iiG~G~~g~~~a~~l~~~-g-----~~v~~~e~~~ 53 (475)
T 3p1w_A 21 YDVIILGTGLKECILSGLLSHY-G-----KKILVLDRNP 53 (475)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-C-----CcEEEEeccC
Confidence 5899999999999999999999 8 8999999876
No 431
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=90.23 E-value=0.25 Score=51.75 Aligned_cols=36 Identities=22% Similarity=0.329 Sum_probs=32.4
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
..++|+|||+|..|.++|..|++. | .+|+++++.+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~-G-----~~v~vlE~~~~ 46 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLG-G-----VDVMVLEQLPQ 46 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEECCCC
Confidence 447899999999999999999999 8 89999998764
No 432
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=90.22 E-value=0.26 Score=49.65 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=31.1
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCch
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGR 83 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~-V~l~~r~~~ 83 (465)
++|+|||+|..|.++|..|++. | .+ |+++.+++.
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~-G-----~~~v~v~E~~~~ 39 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQA-G-----IGKVTLLESSSE 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEECCCC
Confidence 6899999999999999999998 7 88 999998764
No 433
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=90.16 E-value=0.55 Score=49.67 Aligned_cols=74 Identities=16% Similarity=0.182 Sum_probs=45.4
Q ss_pred cccccccccCCCeeEeecchhHHHhHHHhhhhc-----------CCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCe
Q 012349 5 NEVVNDSLSSNGLIHHTNGSLEERLDELRRLMG-----------KAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV 73 (465)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~ 73 (465)
|-++++. .+|-.+.+|-...--..-++.-.. ...-..+++.|+|+|.+|.+++..|++. | .
T Consensus 317 Nti~~~~--~~gk~~g~nTD~~G~~~~l~~~~~~~~~~~~~~~~~~~l~~k~vlV~GaGGig~aia~~L~~~-G-----~ 388 (523)
T 2o7s_A 317 NTILRRK--SDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAGGAGKALAYGAKEK-G-----A 388 (523)
T ss_dssp SEEEECT--TTCCEEEECCHHHHHHHHHHHHC-------------------CEEEECCSHHHHHHHHHHHHH-C-----C
T ss_pred eEEEEec--CCCeEEEEcCCHHHHHHHHHHhhhhccccccccccccccCCCEEEEECCcHHHHHHHHHHHHC-C-----C
Confidence 4455432 366666666554433334433211 0111235799999999999999999999 8 7
Q ss_pred eEEEEecCchhhh
Q 012349 74 LIRIWRRPGRSVD 86 (465)
Q Consensus 74 ~V~l~~r~~~~~~ 86 (465)
+|++++|+.+.++
T Consensus 389 ~V~i~~R~~~~a~ 401 (523)
T 2o7s_A 389 KVVIANRTYERAL 401 (523)
T ss_dssp -CEEEESSHHHHH
T ss_pred EEEEEECCHHHHH
Confidence 8999999876544
No 434
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=90.15 E-value=0.23 Score=53.37 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=30.6
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
.+|+|||+|..|.+.|..|++. | .+|+++.+++
T Consensus 24 ~DVvIVGgG~AGl~aA~~Lar~-G-----~~V~LiEr~~ 56 (591)
T 3i3l_A 24 SKVAIIGGGPAGSVAGLTLHKL-G-----HDVTIYERSA 56 (591)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHcC-C-----CCEEEEcCCC
Confidence 6899999999999999999998 7 8999999873
No 435
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=90.10 E-value=0.68 Score=46.64 Aligned_cols=40 Identities=18% Similarity=0.354 Sum_probs=29.7
Q ss_pred CHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeeccc
Q 012349 153 NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (465)
Q Consensus 153 dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kGi 200 (465)
|.++...++|++|+|+|...-.++.+++ . +..||.++.-+
T Consensus 71 ~~~~~~~~~Dvvf~alp~~~s~~~~~~~-----~---g~~VIDlSsdf 110 (351)
T 1vkn_A 71 DPEKVSKNCDVLFTALPAGASYDLVREL-----K---GVKIIDLGADF 110 (351)
T ss_dssp CHHHHHHHCSEEEECCSTTHHHHHHTTC-----C---SCEEEESSSTT
T ss_pred CHHHhhcCCCEEEECCCcHHHHHHHHHh-----C---CCEEEECChhh
Confidence 4444347799999999999888777665 3 57888888554
No 436
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=90.03 E-value=0.28 Score=47.03 Aligned_cols=36 Identities=22% Similarity=0.197 Sum_probs=32.1
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 42 ~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
++|+|.|.|+ |.+|+.++..|.+. | ++|++.+|+..
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVAS-G-----EEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT-T-----CCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHC-C-----CEEEEEecCCc
Confidence 4589999998 99999999999998 7 89999999764
No 437
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=89.93 E-value=0.42 Score=46.39 Aligned_cols=62 Identities=16% Similarity=0.265 Sum_probs=32.8
Q ss_pred EeecchhHHHhHHHhhhhc-----------CCCCCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 19 HHTNGSLEERLDELRRLMG-----------KAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
||.-|.||..+..-=+++- |.+-..++|.|.|+ |.+|.++|..|++. | .+|.+.+|+++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~l~~k~vlVTGas~GIG~aia~~la~~-G-----~~V~~~~r~~~~~~ 79 (293)
T 3rih_A 6 HHHMGTLEAQTQGPGSMLVVESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARA-G-----ANVAVAARSPRELS 79 (293)
T ss_dssp ----------------------------CCTTCCTTCEEEETTTTSHHHHHHHHHHHHT-T-----CEEEEEESSGGGGH
T ss_pred ccccchhhhhhcCCceeeeecCCCCcccccccCCCCCEEEEeCCCcHHHHHHHHHHHHC-C-----CEEEEEECCHHHHH
Confidence 5666777766544222111 11112356778886 78999999999999 8 89999999986554
No 438
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=89.92 E-value=0.27 Score=46.75 Aligned_cols=34 Identities=15% Similarity=0.203 Sum_probs=30.3
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEE-EecC
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRI-WRRP 81 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l-~~r~ 81 (465)
.+++|+|||+|.-|.+.|..|++. | ++|++ ++++
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~li~e~~ 37 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRG-G-----LKNVVMFEKG 37 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHH-T-----CSCEEEECSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-C-----CCeEEEEeCC
Confidence 457999999999999999999998 7 88999 8873
No 439
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=89.83 E-value=0.59 Score=48.32 Aligned_cols=36 Identities=11% Similarity=0.211 Sum_probs=31.8
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
..+||.|||.|..|.+.|..|.+. | ++|+++|+++.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~-G-----~~V~~~D~~~~ 43 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKL-G-----AIVTVNDGKPF 43 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHT-T-----CEEEEEESSCG
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC-C-----CEEEEEeCCcc
Confidence 347999999999999999999988 8 99999999763
No 440
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=89.81 E-value=0.28 Score=47.44 Aligned_cols=34 Identities=21% Similarity=0.150 Sum_probs=30.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
+++|+|||+|.-|.+.|..|++. | ++|+++++++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMR-G-----LSFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-C-----CCEEEEeCCC
Confidence 46899999999999999999988 7 8999999875
No 441
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=89.81 E-value=0.21 Score=52.06 Aligned_cols=62 Identities=19% Similarity=0.209 Sum_probs=34.1
Q ss_pred EeecchhHHHhHH-Hhhhh--cCCCCCC-ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 19 HHTNGSLEERLDE-LRRLM--GKAEGDP-LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 19 ~~~~~~~~~~~~~-~~~~~--~~~~~~~-mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
||..|+-+-+.-. +||.+ .|....| ++|+|||+|.-|.+.|..|++. |. ++.+|+++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~m~~~~m~~dvvIIGaG~aGl~aA~~l~~~-g~--~~~~V~lie~~~~ 72 (490)
T 2bc0_A 7 HHHHGMASMTGGQQMGRTLYDDDDKDRWGSKIVVVGANHAGTACIKTMLTN-YG--DANEIVVFDQNSN 72 (490)
T ss_dssp -----------CCCCSCCTTCCCCTTCCCCEEEEECCSHHHHHHHHHHHHH-HG--GGSEEEEECSSSC
T ss_pred ccccccccccchhhhccccccccchhccCCcEEEECCCHHHHHHHHHHHhc-CC--CCCeEEEEECCCC
Confidence 5667777766543 22221 1222223 6899999999999999999986 30 0168999998763
No 442
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=89.72 E-value=0.57 Score=48.35 Aligned_cols=35 Identities=26% Similarity=0.372 Sum_probs=31.2
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
.+++|+|||+|..|.+.|..|++. | ++|+++.++.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~-g-----~~v~vlE~~~ 66 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGA-G-----HQVTVLEASE 66 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHH-T-----CEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-C-----CeEEEEECCC
Confidence 357899999999999999999998 8 8999998764
No 443
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=89.65 E-value=0.28 Score=49.46 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=30.1
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
++|+|||+|.-|.+.|..|++. | ++|+++.++.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~-G-----~~V~vlE~~~ 34 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA-G-----KKVLLLEGGE 34 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHc-C-----CeEEEEecCC
Confidence 6899999999999999999999 8 8999998754
No 444
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=89.63 E-value=0.32 Score=50.51 Aligned_cols=36 Identities=25% Similarity=0.335 Sum_probs=32.1
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
..++|+|||+|.-|.+.|..|++. | ++|+++++.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-G-----~~V~v~e~~~~ 156 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-G-----YEVHVYDRYDR 156 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-T-----CCEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-C-----CeEEEEeccCC
Confidence 457899999999999999999999 8 89999998753
No 445
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=89.58 E-value=0.28 Score=48.06 Aligned_cols=34 Identities=26% Similarity=0.351 Sum_probs=30.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~-~V~l~~r~~ 82 (465)
.++|+|||+|.-|.+.|..|++. | + +|+++++++
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~-g-----~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDF-G-----ITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHc-C-----CCcEEEEecCC
Confidence 36899999999999999999998 7 7 899999875
No 446
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=89.45 E-value=1.3 Score=45.03 Aligned_cols=42 Identities=17% Similarity=0.219 Sum_probs=29.1
Q ss_pred CHHHHhcCCCEEEEecCcchHHHHHHHHHHhhhccCCCCEEEEeecc
Q 012349 153 NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (465)
Q Consensus 153 dl~eal~~aDiVIlaVps~~l~~vl~~l~~~l~~~~~~~ivIs~~kG 199 (465)
+.+ .+.++|+||+|+|.....++++.+.. .+. +..||+++.-
T Consensus 62 ~~~-~~~~vDvvf~a~~~~~s~~~~~~~~~---~G~-k~~VID~ss~ 103 (377)
T 3uw3_A 62 SID-DLKKCDVIITCQGGDYTNDVFPKLRA---AGW-NGYWIDAASS 103 (377)
T ss_dssp CHH-HHHTCSEEEECSCHHHHHHHHHHHHH---TTC-CSEEEECSST
T ss_pred Chh-HhcCCCEEEECCChHHHHHHHHHHHH---CCC-CEEEEeCCcc
Confidence 443 36789999999999888887777643 210 1378888754
No 447
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=89.08 E-value=0.36 Score=50.80 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=30.7
Q ss_pred CceEEEECccHHHHHHHHHHHH---hcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~---~~G~~~~~~~V~l~~r~~ 82 (465)
+.+|+|||+|..|.+.|..|++ . | .+|+|+.+.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~-G-----~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQ-Q-----ANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCS-S-----CEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCC-C-----CEEEEECCCC
Confidence 4689999999999999999999 7 7 8999999854
No 448
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=89.08 E-value=0.54 Score=45.48 Aligned_cols=36 Identities=8% Similarity=-0.033 Sum_probs=31.2
Q ss_pred CceEEEECcc---HHHHHHHHHHHHhcCCCCCCeeEEEEecCchh
Q 012349 43 PLRIVGVGAG---AWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (465)
Q Consensus 43 ~mkIaIIGaG---amGsalA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (465)
.+++.|.|++ .+|.++|..|++. | .+|.+.+|+++.
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~-G-----~~V~~~~r~~~~ 68 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQ-G-----AEVALTYLSETF 68 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHT-T-----CEEEEEESSGGG
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHC-C-----CEEEEEeCChHH
Confidence 3578999986 8999999999999 8 899999998653
No 449
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=89.08 E-value=0.33 Score=47.40 Aligned_cols=36 Identities=22% Similarity=0.275 Sum_probs=30.7
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 42 ~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
..|+|.|.|+ |.+|++++..|.+. | ++|++++|++.
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~-G-----~~V~~~~r~~~ 54 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQ-G-----RTVRGFDLRPS 54 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHT-T-----CCEEEEESSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC-C-----CEEEEEeCCCC
Confidence 4589999998 99999999999998 7 89999999864
No 450
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=88.97 E-value=0.33 Score=50.44 Aligned_cols=33 Identities=15% Similarity=0.313 Sum_probs=30.0
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
.+|+|||+|.-|.+.|..|++. | ++|.++++++
T Consensus 26 ~dVvVIGgG~aGl~aA~~la~~-G-----~~V~liEk~~ 58 (491)
T 3urh_A 26 YDLIVIGSGPGGYVCAIKAAQL-G-----MKVAVVEKRS 58 (491)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-C-----CeEEEEecCC
Confidence 4799999999999999999998 7 8999999754
No 451
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=88.89 E-value=0.45 Score=45.32 Aligned_cols=37 Identities=16% Similarity=0.177 Sum_probs=31.7
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 44 mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
+++.|.|+ |.+|.++|..|++. | ++|.+.+|+++..+
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~-G-----~~Vi~~~r~~~~~~ 68 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHAD-G-----LGVVIADLAAEKGK 68 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHC-C-----CEEEEEeCChHHHH
Confidence 56888887 78999999999999 8 89999999876544
No 452
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=88.88 E-value=0.43 Score=45.93 Aligned_cols=34 Identities=24% Similarity=0.313 Sum_probs=31.0
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
+|||.|.|+ |.+|+.++..|.++ | ++|+..+|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~ 36 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKND-G-----NTPIILTRSI 36 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC-C-----CEEEEEeCCC
Confidence 479999995 99999999999998 7 8999999984
No 453
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=88.83 E-value=0.3 Score=52.17 Aligned_cols=34 Identities=24% Similarity=0.316 Sum_probs=30.4
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
..|+|||+|..|.++|..|++. | .+|.++++.+.
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~-G-----~~V~VlEr~~~ 83 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAG-G-----VGALVLEKLVE 83 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHT-T-----CCEEEEBSCSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEcCCCC
Confidence 4699999999999999999999 8 89999998754
No 454
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=88.81 E-value=0.33 Score=46.57 Aligned_cols=34 Identities=15% Similarity=0.052 Sum_probs=30.9
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
+.+|+|||+|.-|.+.|..|++. | ++|+++++++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~~ 40 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR-Q-----ASVKIIESLP 40 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-C-----CCEEEEEcCC
Confidence 35899999999999999999998 7 8999999875
No 455
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=88.80 E-value=0.39 Score=48.88 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=31.1
Q ss_pred CceEEEECccHHHHHHHHHHHH--hcCCCCCCeeEEEEecCch
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQD--SYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~--~~G~~~~~~~V~l~~r~~~ 83 (465)
+++|+|||+|.-|.+.|..|++ . | ++|+++++++.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~-g-----~~Vtlie~~~~ 38 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMP-D-----LKITLISDRPY 38 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCT-T-----CEEEEECSSSE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCC-C-----CeEEEECCCCC
Confidence 3689999999999999999998 5 5 89999999864
No 456
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=88.78 E-value=0.34 Score=46.80 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=30.9
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
.+|+|||+|.-|.+.|..|++. | ++|+++++++.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~-g-----~~v~vie~~~~ 37 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRS-G-----LSYVILDAEAS 37 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS-S-----CCEEEECCSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEECCCC
Confidence 5899999999999999999998 7 89999998753
No 457
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=88.74 E-value=0.27 Score=51.63 Aligned_cols=36 Identities=14% Similarity=0.122 Sum_probs=31.1
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
+++||+|||+|.-|...|..|.+. + ++|+|+++++.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~-~-----~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTK-K-----YNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTT-T-----CEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhC-C-----CcEEEECCCCC
Confidence 457999999999999999999876 5 89999998753
No 458
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=88.72 E-value=0.41 Score=45.86 Aligned_cols=35 Identities=26% Similarity=0.325 Sum_probs=31.7
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchh
Q 012349 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (465)
Q Consensus 44 mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (465)
|||.|.|+ |.+|++++..|++. | ++|++.+|+++.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~ 36 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVEL-G-----YEVVVVDNLSSG 36 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEECCCSSC
T ss_pred CEEEEECCCChHHHHHHHHHHhC-C-----CEEEEEeCCCCC
Confidence 68999998 99999999999998 7 899999997653
No 459
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=88.66 E-value=0.4 Score=50.94 Aligned_cols=53 Identities=23% Similarity=0.282 Sum_probs=39.2
Q ss_pred hhHHHhHHHhhhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 24 SLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
++.+-.+..++++.........|+|||+|..|.+.|..+++. | .+|.++.+.+
T Consensus 107 ~l~~a~~~~~~~~~~~~~~~~DVvVVGaG~aGl~aA~~la~~-G-----~~V~vlEk~~ 159 (571)
T 1y0p_A 107 ELAKDKSERQAALASAPHDTVDVVVVGSGGAGFSAAISATDS-G-----AKVILIEKEP 159 (571)
T ss_dssp GGGGGHHHHHHHHHSCCSEECSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred HHHHHHHHhhhhhccCCCCCCCEEEECCCHHHHHHHHHHHHC-C-----CcEEEEeCCC
Confidence 344444455555543333346899999999999999999998 8 8999998865
No 460
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=88.47 E-value=0.28 Score=48.17 Aligned_cols=33 Identities=18% Similarity=0.177 Sum_probs=29.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
.++|+|||+|..|.+.|..|+ . | .+|+++++++
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~-G-----~~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-A-H-----GRVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-T-T-----SCEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-C-C-----CCEEEEECCC
Confidence 467999999999999999999 6 7 8999999874
No 461
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=88.47 E-value=0.4 Score=48.50 Aligned_cols=35 Identities=26% Similarity=0.330 Sum_probs=30.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCee--EEEEecCc
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL--IRIWRRPG 82 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~--V~l~~r~~ 82 (465)
.+++|+|||+|.-|.+.|..|++. | ++ |+++++++
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~-g-----~~~~V~lie~~~ 44 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQN-G-----FEGRVLVIGREP 44 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-T-----CCSCEEEEESSS
T ss_pred CCCcEEEECChHHHHHHHHHHHcc-C-----cCCCEEEEecCC
Confidence 346899999999999999999998 7 55 99998865
No 462
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=88.37 E-value=0.23 Score=48.10 Aligned_cols=31 Identities=13% Similarity=0.142 Sum_probs=29.0
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEec
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRR 80 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r 80 (465)
++|+|||+|..|.+.|..|++. | ++|+++++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~-g-----~~v~lie~ 39 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARA-E-----LKPLLFEG 39 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCCEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CeEEEEec
Confidence 6899999999999999999998 7 89999987
No 463
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=88.33 E-value=0.4 Score=50.34 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=30.5
Q ss_pred CceEEEECccHHHHHHHHHHHH------------hcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQD------------SYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~------------~~G~~~~~~~V~l~~r~~ 82 (465)
.++|+|||+|.-|.+.|..|++ . | .+|+|+.+++
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~-G-----~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSP-K-----LNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSC-S-----CEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCC-C-----CeEEEEeCCC
Confidence 4689999999999999999999 6 6 8999999854
No 464
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=88.32 E-value=0.67 Score=48.11 Aligned_cols=36 Identities=25% Similarity=0.391 Sum_probs=29.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEe----cC
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWR----RP 81 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~----r~ 81 (465)
..||+|+|+|..|.+++..|... |.- ..+|++++ |+
T Consensus 186 ~~rvlvlGAGgAg~aia~~L~~~-G~~--~~~I~vvd~~~~R~ 225 (439)
T 2dvm_A 186 EITLALFGAGAAGFATLRILTEA-GVK--PENVRVVELVNGKP 225 (439)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHT-TCC--GGGEEEEEEETTEE
T ss_pred CCEEEEECccHHHHHHHHHHHHc-CCC--cCeEEEEEccCCCc
Confidence 36899999999999999999988 710 02799999 87
No 465
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=88.30 E-value=0.47 Score=42.51 Aligned_cols=35 Identities=23% Similarity=0.343 Sum_probs=30.6
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 42 ~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
++|||.|.|+ |.+|.+++..|+ . | ++|.+.+|+++
T Consensus 2 ~kM~vlVtGasg~iG~~~~~~l~-~-g-----~~V~~~~r~~~ 37 (202)
T 3d7l_A 2 NAMKILLIGASGTLGSAVKERLE-K-K-----AEVITAGRHSG 37 (202)
T ss_dssp CSCEEEEETTTSHHHHHHHHHHT-T-T-----SEEEEEESSSS
T ss_pred CCcEEEEEcCCcHHHHHHHHHHH-C-C-----CeEEEEecCcc
Confidence 4579999996 899999999999 8 7 89999999863
No 466
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=88.30 E-value=0.46 Score=44.81 Aligned_cols=39 Identities=18% Similarity=0.086 Sum_probs=33.2
Q ss_pred CCceEEEECc-c-HHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 42 DPLRIVGVGA-G-AWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 42 ~~mkIaIIGa-G-amGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
..++|.|.|+ | .+|.++|..|++. | ++|.+.+|+.+..+
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~-G-----~~V~~~~r~~~~~~ 61 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE-G-----ADVVISDYHERRLG 61 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC-C-----CEEEEecCCHHHHH
Confidence 3468999998 8 5999999999999 8 89999999976544
No 467
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=88.25 E-value=0.42 Score=46.90 Aligned_cols=34 Identities=29% Similarity=0.343 Sum_probs=31.0
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
+|+|.|.|+ |.+|.+++..|.+. | ++|++.+|++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~-g-----~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDA-H-----RPTYILARPG 44 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHT-T-----CCEEEEECSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC-C-----CCEEEEECCC
Confidence 478999998 99999999999998 7 8999999987
No 468
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=88.24 E-value=0.4 Score=45.79 Aligned_cols=32 Identities=16% Similarity=0.212 Sum_probs=29.5
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecC
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRP 81 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~-~V~l~~r~ 81 (465)
++|+|||+|.-|.+.|..|++. | + +|.+++++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-g-----~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG-G-----VKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHC-C-----CCcEEEEcCC
Confidence 5899999999999999999998 7 8 99999875
No 469
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=88.21 E-value=0.39 Score=46.38 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=30.9
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 44 mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
++|.|.|+ |.+|.+++..|.+. | ++|++.+|++.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~l~R~~~ 46 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKL-G-----HPTYVFTRPNS 46 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHT-T-----CCEEEEECTTC
T ss_pred CeEEEECCCchHHHHHHHHHHHC-C-----CcEEEEECCCC
Confidence 58999996 99999999999998 7 89999999874
No 470
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=88.21 E-value=0.49 Score=45.66 Aligned_cols=35 Identities=23% Similarity=0.191 Sum_probs=30.6
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 43 ~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
||+|.|.|+ |.+|.+++..|.+. | ++|++.+|+..
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 36 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDE-G-----LSVVVVDNLQT 36 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC-C-----CEEEEEeCCCc
Confidence 479999986 99999999999998 7 89999998753
No 471
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=88.18 E-value=0.71 Score=43.54 Aligned_cols=39 Identities=13% Similarity=0.194 Sum_probs=33.1
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 42 ~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
..+++.|.|+ |.+|.++|..|++. | ++|.+.+|+++.++
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~-G-----~~V~~~~r~~~~~~ 46 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEG-G-----AEVLLTGRNESNIA 46 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHH
Confidence 3467889986 78999999999999 8 89999999976544
No 472
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=88.14 E-value=0.46 Score=47.38 Aligned_cols=35 Identities=29% Similarity=0.423 Sum_probs=30.5
Q ss_pred ceEEEECccHHHHHHHHHHHHhc-CCCCCCeeEEEEecCch
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSY-GYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~-G~~~~~~~V~l~~r~~~ 83 (465)
|+|+|||+|..|.++|..|++.. | .+|+++.+++.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G-----~~V~v~E~~~~ 36 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPL-----WAIDIVEKNDE 36 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTT-----SEEEEECSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCC-----CCEEEEECCCC
Confidence 58999999999999999999861 3 89999998764
No 473
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=88.09 E-value=0.57 Score=43.10 Aligned_cols=37 Identities=19% Similarity=0.298 Sum_probs=32.4
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCe--eEEEEecCchhh
Q 012349 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSV 85 (465)
Q Consensus 43 ~mkIaIIGa-GamGsalA~~La~~~G~~~~~~--~V~l~~r~~~~~ 85 (465)
.|+|.|.|+ |.+|.+++..|++. | + +|++.+|+++..
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~-G-----~~~~V~~~~r~~~~~ 57 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQ-G-----LFSKVTLIGRRKLTF 57 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHH-T-----CCSEEEEEESSCCCC
T ss_pred CCeEEEECCCcHHHHHHHHHHHcC-C-----CCCEEEEEEcCCCCc
Confidence 368999995 99999999999999 7 7 999999987543
No 474
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=88.02 E-value=0.55 Score=43.32 Aligned_cols=34 Identities=18% Similarity=0.183 Sum_probs=30.8
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 44 mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
++|.|.|+ |.+|.+++..|++. | ++|++.+|+++
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 36 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARA-G-----HTVIGIDRGQA 36 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESSSS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhC-C-----CEEEEEeCChh
Confidence 57999997 99999999999998 7 89999999875
No 475
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=87.99 E-value=0.57 Score=48.18 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=30.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
.++|+|||+|..|.+.|..|++. | ++|+++.++.
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~-g-----~~v~v~E~~~ 44 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKA-G-----YKVTVLEART 44 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-C-----CCEEEEeccC
Confidence 47899999999999999999998 7 8999998765
No 476
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=87.95 E-value=0.52 Score=45.59 Aligned_cols=40 Identities=15% Similarity=0.121 Sum_probs=31.8
Q ss_pred CCCCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchh
Q 012349 39 AEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (465)
Q Consensus 39 ~~~~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (465)
..+..|||.|.|+ |.+|.+++..|.+. | ++|++.+|++..
T Consensus 10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~ 50 (335)
T 1rpn_A 10 HGSMTRSALVTGITGQDGAYLAKLLLEK-G-----YRVHGLVARRSS 50 (335)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCCSS
T ss_pred ccccCCeEEEECCCChHHHHHHHHHHHC-C-----CeEEEEeCCCcc
Confidence 4445689999997 99999999999998 7 899999998653
No 477
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=87.94 E-value=0.77 Score=46.59 Aligned_cols=34 Identities=35% Similarity=0.422 Sum_probs=31.0
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~ 81 (465)
..++|+|||+|.-|.+.|..|++. | ++|+++.++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~-G-----~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRA-G-----HDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHT-S-----CEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-C-----CcEEEEecc
Confidence 357999999999999999999998 7 899999877
No 478
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=87.93 E-value=0.43 Score=49.42 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=30.1
Q ss_pred ceEEEECccHHHHHHHHHHHH---hcCCCCCCee---EEEEecCc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVL---IRIWRRPG 82 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~---~~G~~~~~~~---V~l~~r~~ 82 (465)
++|+|||+|.-|.+.|..|++ . | .+ |+++++++
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~-G-----~~~~~V~v~E~~~ 41 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEK-G-----AEIPELVCFEKQA 41 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHT-T-----CCCCEEEEECSSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhc-C-----CCCCcEEEEEcCC
Confidence 689999999999999999998 7 7 77 99999875
No 479
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=87.92 E-value=0.8 Score=43.45 Aligned_cols=38 Identities=11% Similarity=0.150 Sum_probs=32.3
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 43 ~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
.++|.|.|+ |.+|.+++..|++. | ++|.+.+|+++..+
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~-G-----~~V~~~~r~~~~~~ 69 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKL-K-----SKLVLWDINKHGLE 69 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-C-----CEEEEEEcCHHHHH
Confidence 367999986 89999999999999 8 89999999876443
No 480
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=87.81 E-value=0.49 Score=45.84 Aligned_cols=60 Identities=15% Similarity=0.235 Sum_probs=32.7
Q ss_pred CCCeeEeecchhHHHhHHHhhhhcCCCCCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
|.---||..|.+....+ +|.+ ..+++.|.|+ |.+|.++|..|++. | ++|.+.+|+++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~----m~~l---~~k~vlVTGas~gIG~aia~~L~~~-G-----~~V~~~~r~~~~~~ 64 (297)
T 1xhl_A 4 SHHHHHHSSGLVPRGSH----MARF---SGKSVIITGSSNGIGRSAAVIFAKE-G-----AQVTITGRNEDRLE 64 (297)
T ss_dssp -----------------------CC---TTCEEEETTCSSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred ccccccccCCccccccc----ccCC---CCCEEEEeCCCcHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHH
Confidence 33344666666654433 2222 2357888886 78999999999999 8 89999999876543
No 481
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=87.55 E-value=2.8 Score=41.12 Aligned_cols=117 Identities=19% Similarity=0.203 Sum_probs=74.1
Q ss_pred CeEEecCHHHHhcCCCEEEEecCcch-HHHHHHHHHHhhhccCCCCEEEEeeccccccccccccCCCHHHHHHhHhCCCC
Q 012349 147 PLKVVTNLQEAVWDADIVINGLPSTE-TKEVFEEISRYWKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPI 225 (465)
Q Consensus 147 ~i~~t~dl~eal~~aDiVIlaVps~~-l~~vl~~l~~~l~~~~~~~ivIs~~kGi~~~~~~~~~~~~~se~I~e~lg~~~ 225 (465)
++++++|-.||++++|++|+-+|--. ...+++++.+++++ +.+|- .+=.+++- .+...+++ +++.
T Consensus 128 GVkVtsDD~EAvk~AEi~IlftPfG~~t~~Iakkii~~lpE---gAII~-nTCTipp~--------~ly~~le~-l~R~- 193 (358)
T 2b0j_A 128 GLKVTSDDREAVEGADIVITWLPKGNKQPDIIKKFADAIPE---GAIVT-HACTIPTT--------KFAKIFKD-LGRE- 193 (358)
T ss_dssp TCEEESCHHHHHTTCSEEEECCTTCTTHHHHHHHHGGGSCT---TCEEE-ECSSSCHH--------HHHHHHHH-TTCT-
T ss_pred CcEeecchHHHhcCCCEEEEecCCCCCcHHHHHHHHhhCcC---CCEEe-cccCCCHH--------HHHHHHHH-hCcc-
Confidence 68899999999999999999999754 88999999999998 66543 33244432 12233443 5532
Q ss_pred ccEEEEeC-CchhhhhhccCceEEEEeCChhHHHHHHHHHcCCCCeEEe-cCChHH
Q 012349 226 ENILYLGG-PNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWD-NGDLVT 279 (465)
Q Consensus 226 ~~i~vlsG-P~~a~ev~~g~~t~~~~~~~~~~~~~l~~ll~~~g~~v~~-s~Di~g 279 (465)
.+.+.|. |.-.-+. .|+.....--.+++..+++.++-++.+-..|. ..|+++
T Consensus 194 -DvgIsS~HPaaVPgt-~Gq~~~g~~yAtEEqIeklveLaksa~k~ay~vPAdl~S 247 (358)
T 2b0j_A 194 -DLNITSYHPGCVPEM-KGQVYIAEGYASEEAVNKLYEIGKIARGKAFKMPANLIG 247 (358)
T ss_dssp -TSEEEECBCSSCTTT-CCCEEEEESSSCHHHHHHHHHHHHHHHSCEEEEEHHHHH
T ss_pred -cCCeeccCCCCCCCC-CCccccccccCCHHHHHHHHHHHHHhCCCeEecchhhcc
Confidence 2344433 4333222 45533222224677788888888776655554 456655
No 482
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=87.54 E-value=0.46 Score=48.49 Aligned_cols=35 Identities=20% Similarity=0.238 Sum_probs=31.3
Q ss_pred CceEEEECccHHHHHHHHHHHH---hcCCCCCCeeEEEEecCch
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~---~~G~~~~~~~V~l~~r~~~ 83 (465)
|++|+|||+|.-|.+.|..|++ . | ++|+++++++.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~-g-----~~Vtlie~~~~ 41 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGS-G-----HEVTLISANDY 41 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGG-G-----SEEEEECSSSE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCC-c-----CEEEEEeCCCC
Confidence 5789999999999999999998 5 5 89999998874
No 483
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=87.54 E-value=0.89 Score=44.39 Aligned_cols=36 Identities=14% Similarity=0.201 Sum_probs=26.3
Q ss_pred CCCceEEEECccHH-HHHHHHHHHHhcCCCCCCeeEEEEec
Q 012349 41 GDPLRIVGVGAGAW-GSVFTAMLQDSYGYLRDKVLIRIWRR 80 (465)
Q Consensus 41 ~~~mkIaIIGaGam-GsalA~~La~~~G~~~~~~~V~l~~r 80 (465)
-..++++|||+|.+ |..+|..|... |. +..|++..+
T Consensus 156 l~gk~vvVvG~s~iVG~p~A~lL~~~-g~---~atVtv~h~ 192 (281)
T 2c2x_A 156 IAGAHVVVIGRGVTVGRPLGLLLTRR-SE---NATVTLCHT 192 (281)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHTST-TT---CCEEEEECT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHhcC-CC---CCEEEEEEC
Confidence 34579999999975 99999999765 20 157877643
No 484
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=87.46 E-value=0.43 Score=46.54 Aligned_cols=37 Identities=22% Similarity=0.208 Sum_probs=28.4
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 42 ~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
.+|||.|.|+ |.+|++++..|.+. |. .+.|+..+|..
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~-g~---~~~v~~~~~~~ 60 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQS-YE---TYKIINFDALT 60 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHH-CT---TEEEEEEECCC
T ss_pred CCCeEEEECCccHHHHHHHHHHHhh-CC---CcEEEEEeccc
Confidence 4589999998 99999999999998 61 14566666553
No 485
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=87.38 E-value=0.85 Score=44.16 Aligned_cols=39 Identities=13% Similarity=0.124 Sum_probs=33.1
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 42 ~~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
..++|.|.|+ |.+|.++|..|++. | ++|.+.+|+++.++
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~-G-----~~V~~~~r~~~~~~ 69 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARR-G-----ARLVLSDVDQPALE 69 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-C-----CEEEEEECCHHHHH
Confidence 3467999997 78999999999999 8 89999999986544
No 486
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=87.34 E-value=0.67 Score=44.79 Aligned_cols=37 Identities=19% Similarity=0.100 Sum_probs=31.7
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 44 mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
++|.|.|+ |.+|.+++..|++. | ++|.+.+|+++..+
T Consensus 35 k~vlVTGas~gIG~aia~~L~~~-G-----~~V~~~~r~~~~~~ 72 (291)
T 3cxt_A 35 KIALVTGASYGIGFAIASAYAKA-G-----ATIVFNDINQELVD 72 (291)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT-T-----CEEEEEESSHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHH
Confidence 57889996 88999999999999 8 89999999876443
No 487
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=87.27 E-value=0.41 Score=48.98 Aligned_cols=37 Identities=16% Similarity=0.233 Sum_probs=30.4
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 40 ~~~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
-...++|+|||+|.-|.+.|..|++. | ++|+++.++.
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~-g-----~~v~v~E~~~ 49 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSR-G-----TDAVLLESSA 49 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTT-T-----CCEEEECSSS
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHC-C-----CCEEEEEcCC
Confidence 33457899999999999999999998 7 8999998865
No 488
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=87.24 E-value=0.54 Score=46.14 Aligned_cols=34 Identities=15% Similarity=0.058 Sum_probs=30.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
.++|+|||+|.-|.+.|..|++. | ++|+++++++
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~~ 47 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMN-N-----ISCRIIESMP 47 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-C-----CCEEEEecCC
Confidence 36899999999999999999988 7 8999999865
No 489
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=87.23 E-value=0.65 Score=44.39 Aligned_cols=38 Identities=16% Similarity=0.189 Sum_probs=32.0
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012349 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (465)
Q Consensus 43 ~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (465)
.++|.|.|+ |.+|.+++..|++. | ++|.+.+|+++..+
T Consensus 29 ~k~vlVTGas~gIG~aia~~L~~~-G-----~~V~~~~r~~~~~~ 67 (276)
T 2b4q_A 29 GRIALVTGGSRGIGQMIAQGLLEA-G-----ARVFICARDAEACA 67 (276)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC-C-----CEEEEEeCCHHHHH
Confidence 357889986 88999999999999 8 89999999876443
No 490
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=87.22 E-value=0.49 Score=51.55 Aligned_cols=33 Identities=18% Similarity=0.305 Sum_probs=30.5
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
..|+|||+|..|.+.|..|++. | .+|+++.++.
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~~-G-----~~V~vlEk~~ 297 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQRR-G-----AVVTLYCADA 297 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHTT-T-----CCEEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHHHHC-C-----CcEEEEeCCC
Confidence 6899999999999999999999 8 8999999864
No 491
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=87.21 E-value=0.5 Score=45.39 Aligned_cols=34 Identities=18% Similarity=0.092 Sum_probs=28.2
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 44 mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
|+|.|.|+ |.+|.+++..|++. | ++|++.+|+..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 37 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQN-N-----WHAVGCGFRRA 37 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT-T-----CEEEEEC----
T ss_pred CeEEEECCCcHHHHHHHHHHHhC-C-----CeEEEEccCCC
Confidence 68999998 99999999999998 7 89999998653
No 492
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=87.21 E-value=0.44 Score=42.88 Aligned_cols=35 Identities=17% Similarity=0.176 Sum_probs=31.0
Q ss_pred CceEEEEC-ccHHHHHHHHHHHHhcCCCCCCe--eEEEEecCch
Q 012349 43 PLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGR 83 (465)
Q Consensus 43 ~mkIaIIG-aGamGsalA~~La~~~G~~~~~~--~V~l~~r~~~ 83 (465)
.|+|.|.| +|.+|.+++..|++. | + +|++.+|+++
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~-g-----~~~~V~~~~r~~~ 42 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSE-P-----TLAKVIAPARKAL 42 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHC-T-----TCCEEECCBSSCC
T ss_pred CceEEEECCCcHHHHHHHHHHHhC-C-----CCCeEEEEeCCCc
Confidence 47999999 599999999999998 7 6 8999999874
No 493
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=87.17 E-value=0.57 Score=47.43 Aligned_cols=37 Identities=16% Similarity=0.200 Sum_probs=26.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
..++|++.|||+-|..++..+.-. . ..-..++|.++.
T Consensus 318 ~gk~v~~yGa~~~g~~l~~~~~~~-~----~~i~~~~D~~~~ 354 (416)
T 4e2x_A 318 EGRSVVGYGATAKSATVTNFCGIG-P----DLVHSVYDTTPD 354 (416)
T ss_dssp TTCCEEEECCCSHHHHHHHHHTCC-T----TTSCCEEESCGG
T ss_pred cCCeEEEEccccHHHHHHHhcCCC-c----ceeeEEEeCCcc
Confidence 346899999999999998887432 1 133557788774
No 494
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=87.12 E-value=0.65 Score=49.34 Aligned_cols=38 Identities=26% Similarity=0.203 Sum_probs=32.2
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 42 ~~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
.+++|+|||+|.-|.+.|..|++. + ++++|+++++++.
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~-~---~g~~V~vie~~~~ 72 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRL-S---EEDEIIMVERGEY 72 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-C---SSSEEEEECSSSC
T ss_pred cCCCEEEECCcHHHHHHHHHHHhh-C---cCCCEEEEECCCC
Confidence 457999999999999999999987 3 1379999998764
No 495
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=87.06 E-value=0.59 Score=43.38 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=30.2
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~ 82 (465)
.+|+|||+|..|...|..|++. | .+|+++.++.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~-g-----~~v~lie~~~ 36 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQK-G-----VRVGLLTQSL 36 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESCG
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEecCC
Confidence 5799999999999999999998 7 8999999874
No 496
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=87.05 E-value=0.38 Score=45.49 Aligned_cols=37 Identities=22% Similarity=0.182 Sum_probs=30.6
Q ss_pred ceEEEECc-cHHHHHHHHHHHHh-cCCCCCCeeEEEEecCchhh
Q 012349 44 LRIVGVGA-GAWGSVFTAMLQDS-YGYLRDKVLIRIWRRPGRSV 85 (465)
Q Consensus 44 mkIaIIGa-GamGsalA~~La~~-~G~~~~~~~V~l~~r~~~~~ 85 (465)
|+|.|.|+ |.+|++++..|.+. .| ++|++.+|+++..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g-----~~V~~~~r~~~~~ 39 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPA-----SQIIAIVRNVEKA 39 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCG-----GGEEEEESCTTTT
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCC-----CeEEEEEcCHHHH
Confidence 57999997 99999999999864 13 8999999987543
No 497
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=86.91 E-value=0.67 Score=45.10 Aligned_cols=35 Identities=17% Similarity=0.157 Sum_probs=31.2
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 43 ~mkIaIIGa-GamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
+|+|.|.|+ |.+|.+++..|++. | ++|++.+|+..
T Consensus 21 ~~~vlVTGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 56 (333)
T 2q1w_A 21 MKKVFITGICGQIGSHIAELLLER-G-----DKVVGIDNFAT 56 (333)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCSS
T ss_pred CCEEEEeCCccHHHHHHHHHHHHC-C-----CEEEEEECCCc
Confidence 479999995 99999999999998 7 89999999753
No 498
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=86.85 E-value=0.54 Score=49.31 Aligned_cols=35 Identities=26% Similarity=0.322 Sum_probs=31.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012349 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (465)
Q Consensus 43 ~mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~~~ 83 (465)
..+|+|||+|..|.++|..|++. | .+|+++.+++.
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~-G-----~~v~viEr~~~ 39 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQ-G-----VRVLVVERRPG 39 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHC-C-----CCEEEEeCCCC
Confidence 36899999999999999999998 8 89999998764
No 499
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=86.80 E-value=0.7 Score=44.79 Aligned_cols=36 Identities=19% Similarity=0.207 Sum_probs=31.6
Q ss_pred CceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchh
Q 012349 43 PLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (465)
Q Consensus 43 ~mkIaIIG-aGamGsalA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (465)
.|+|.|.| +|-+|+.++..|.+. | ++|++..|+.+.
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~-G-----~~V~~~~r~~~~ 45 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQK-G-----YAVNTTVRDPDN 45 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHT-T-----CEEEEEESCTTC
T ss_pred CCEEEEECCchHHHHHHHHHHHHC-C-----CEEEEEEcCcch
Confidence 57899999 599999999999998 7 899998887653
No 500
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=86.74 E-value=0.64 Score=44.71 Aligned_cols=32 Identities=31% Similarity=0.377 Sum_probs=29.4
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 012349 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (465)
Q Consensus 44 mkIaIIGaGamGsalA~~La~~~G~~~~~~~V~l~~r~ 81 (465)
.+|+|||+|.-|.+.|..|++. | ++|++++++
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~ 48 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARS-G-----FSVAILDKA 48 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESS
T ss_pred CcEEEECcCHHHHHHHHHHHhC-C-----CcEEEEeCC
Confidence 5799999999999999999998 7 899999884
Done!