Citrus Sinensis ID: 012351
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 465 | ||||||
| 255550409 | 490 | conserved hypothetical protein [Ricinus | 0.866 | 0.822 | 0.763 | 0.0 | |
| 224068484 | 392 | predicted protein [Populus trichocarpa] | 0.733 | 0.869 | 0.835 | 1e-179 | |
| 15810385 | 551 | unknown protein [Arabidopsis thaliana] | 0.808 | 0.682 | 0.747 | 1e-179 | |
| 18420285 | 551 | protein trichome birefringence-like 16 [ | 0.808 | 0.682 | 0.747 | 1e-179 | |
| 145334527 | 533 | protein trichome birefringence-like 16 [ | 0.808 | 0.705 | 0.747 | 1e-179 | |
| 356564747 | 625 | PREDICTED: uncharacterized protein LOC10 | 0.898 | 0.668 | 0.695 | 1e-178 | |
| 356545780 | 680 | PREDICTED: uncharacterized protein LOC10 | 0.892 | 0.610 | 0.687 | 1e-178 | |
| 297808139 | 555 | hypothetical protein ARALYDRAFT_910111 [ | 0.825 | 0.691 | 0.731 | 1e-177 | |
| 225444688 | 519 | PREDICTED: uncharacterized protein LOC10 | 0.969 | 0.868 | 0.659 | 1e-175 | |
| 357479407 | 512 | hypothetical protein MTR_4g125060 [Medic | 0.905 | 0.822 | 0.682 | 1e-175 |
| >gi|255550409|ref|XP_002516255.1| conserved hypothetical protein [Ricinus communis] gi|223544741|gb|EEF46257.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/406 (76%), Positives = 357/406 (87%), Gaps = 3/406 (0%)
Query: 60 EKNSSAENSTILTKTKENGKKNLGEKNSKLEKESVDRRSSADSANLSSSERIKADENSTM 119
++N AE+ST+ T+E +N+GEK+ KL+ + +D + SAN SS + ++N TM
Sbjct: 79 KENGDAESSTL---TEEMNNQNIGEKDLKLKDQLLDLAAPIGSANSSSLLGEQDEKNFTM 135
Query: 120 LEQNQACNYAKGKWVVDDSRPLYSGAHCKQWLSQMWACRLMQRTDFAYERLRWQPKDCQM 179
NQACNY KGKWVVDD++PLYSG CKQWL+QMWACRLMQRTDF+YE LRWQP +CQM
Sbjct: 136 FMNNQACNYTKGKWVVDDNQPLYSGFGCKQWLAQMWACRLMQRTDFSYEMLRWQPNNCQM 195
Query: 180 EEFEGSQFLTRMQDRTLAFIGDSLGRQQFQSLMCMVTGGKERPDVEDVGKEYGLVKPRGA 239
E F+GS+FL RM+ +TLAF+GDSLGRQQFQSLMCM+TGGKE PDV DVG+EYGLV+PRG+
Sbjct: 196 EAFKGSEFLKRMEGKTLAFVGDSLGRQQFQSLMCMITGGKETPDVLDVGREYGLVQPRGS 255
Query: 240 IRPNGWAYRFPSTNTTILYYWSACLCDLDPLNITNPATEYAMHLDRPPAFLRQYLHKFDV 299
+RPNGWAYRFPSTNT++LYYWSACLCDL+P++I NPAT+YAMHLDRPP+FLR +LHK DV
Sbjct: 256 VRPNGWAYRFPSTNTSVLYYWSACLCDLEPIDIKNPATDYAMHLDRPPSFLRHFLHKIDV 315
Query: 300 LVLNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIVSWVNSQLPEHPR 359
LVLNTGHHWNRGKLKANRWVMHVGGMPNTN+K+A I AKNFTIHSIV WVN QLP++P
Sbjct: 316 LVLNTGHHWNRGKLKANRWVMHVGGMPNTNKKLAMIGDAKNFTIHSIVDWVNKQLPKYPH 375
Query: 360 LKAFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGSAVKGTGVKLLDI 419
LKAFYRSISPRHFVNGDWNTGGSCDNTTPMS+GKEVLQDES DYSAG AVKGTGVKLLDI
Sbjct: 376 LKAFYRSISPRHFVNGDWNTGGSCDNTTPMSVGKEVLQDESSDYSAGRAVKGTGVKLLDI 435
Query: 420 TALSQVRDEGHISQYSITASRGVQDCLHWCLPGVPDTWNEILFAQL 465
TALSQ+RDEGHIS++SITAS GVQDCLHWCLPGVPDTWNEILFA +
Sbjct: 436 TALSQLRDEGHISRFSITASSGVQDCLHWCLPGVPDTWNEILFALI 481
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224068484|ref|XP_002326131.1| predicted protein [Populus trichocarpa] gi|222833324|gb|EEE71801.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|15810385|gb|AAL07080.1| unknown protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|18420285|ref|NP_568398.1| protein trichome birefringence-like 16 [Arabidopsis thaliana] gi|238481331|ref|NP_001154728.1| protein trichome birefringence-like 16 [Arabidopsis thaliana] gi|332005492|gb|AED92875.1| protein trichome birefringence-like 16 [Arabidopsis thaliana] gi|332005494|gb|AED92877.1| protein trichome birefringence-like 16 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|145334527|ref|NP_001078609.1| protein trichome birefringence-like 16 [Arabidopsis thaliana] gi|332005493|gb|AED92876.1| protein trichome birefringence-like 16 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|356564747|ref|XP_003550610.1| PREDICTED: uncharacterized protein LOC100796855 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356545780|ref|XP_003541313.1| PREDICTED: uncharacterized protein LOC100788136 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297808139|ref|XP_002871953.1| hypothetical protein ARALYDRAFT_910111 [Arabidopsis lyrata subsp. lyrata] gi|297317790|gb|EFH48212.1| hypothetical protein ARALYDRAFT_910111 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|225444688|ref|XP_002277730.1| PREDICTED: uncharacterized protein LOC100247308 [Vitis vinifera] gi|297738542|emb|CBI27787.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|357479407|ref|XP_003609989.1| hypothetical protein MTR_4g125060 [Medicago truncatula] gi|355511044|gb|AES92186.1| hypothetical protein MTR_4g125060 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 465 | ||||||
| TAIR|locus:2180399 | 551 | TBL16 "AT5G20680" [Arabidopsis | 0.761 | 0.642 | 0.785 | 3.9e-163 | |
| TAIR|locus:2160796 | 408 | TBL14 "AT5G64020" [Arabidopsis | 0.763 | 0.870 | 0.607 | 3.2e-129 | |
| TAIR|locus:2040696 | 482 | TBL15 "AT2G37720" [Arabidopsis | 0.713 | 0.688 | 0.582 | 1.4e-110 | |
| TAIR|locus:2080389 | 469 | TBL10 "TRICHOME BIREFRINGENCE- | 0.711 | 0.705 | 0.326 | 1.2e-47 | |
| TAIR|locus:2080767 | 427 | TBL8 "AT3G11570" [Arabidopsis | 0.711 | 0.775 | 0.328 | 3.9e-44 | |
| TAIR|locus:2182157 | 464 | TBL11 "TRICHOME BIREFRINGENCE- | 0.711 | 0.713 | 0.301 | 6.6e-42 | |
| TAIR|locus:2096094 | 475 | TBL6 "AT3G62390" [Arabidopsis | 0.707 | 0.692 | 0.303 | 2.2e-41 | |
| TAIR|locus:2088659 | 556 | TBL1 "AT3G12060" [Arabidopsis | 0.722 | 0.604 | 0.310 | 1.2e-40 | |
| TAIR|locus:2036631 | 541 | TBL2 "AT1G60790" [Arabidopsis | 0.705 | 0.606 | 0.284 | 1.2e-39 | |
| TAIR|locus:2170184 | 608 | TBR [Arabidopsis thaliana (tax | 0.716 | 0.547 | 0.308 | 2.6e-39 |
| TAIR|locus:2180399 TBL16 "AT5G20680" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1588 (564.1 bits), Expect = 3.9e-163, P = 3.9e-163
Identities = 278/354 (78%), Positives = 314/354 (88%)
Query: 112 KADENSTMLEQNQACNYAKGKWVVDDSRPLYSGAHCKQWLSQMWACRLMQRTDFAYERLR 171
+ D ST NQACNYAKGKWVVD+ RPLYSG+ CKQWL+ MWACRLMQRTDFA+E LR
Sbjct: 198 RTDGTSTARITNQACNYAKGKWVVDNHRPLYSGSQCKQWLASMWACRLMQRTDFAFESLR 257
Query: 172 WQPKDCQMEEFEGSQFLTRMQDRTLAFIGDSLGRQQFQSLMCMVTGGKERPDVEDVGKEY 231
WQPKDC MEEFEGS+FL RM+++TLAF+GDSLGRQQFQS+MCM++GGKER DV DVG E+
Sbjct: 258 WQPKDCSMEEFEGSKFLRRMKNKTLAFVGDSLGRQQFQSMMCMISGGKERLDVLDVGPEF 317
Query: 232 GLVKPRGAIRPNGWAYRFPSTNTTILYYWSACLCDLDPLNITNPATEYAMHLDRPPAFLR 291
G + P G RP GWAYRFP TNTT+LY+WS+ LCD++PLNIT+PATE+AMHLDRPPAFLR
Sbjct: 318 GFITPEGGARPGGWAYRFPETNTTVLYHWSSTLCDIEPLNITDPATEHAMHLDRPPAFLR 377
Query: 292 QYLHKFDVLVLNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIVSWVN 351
QYL K DVLV+NTGHHWNRGKL N+WVMHV G+PNTNRK+A + AKNFTIHS VSWVN
Sbjct: 378 QYLQKIDVLVMNTGHHWNRGKLNGNKWVMHVNGVPNTNRKLAALGNAKNFTIHSTVSWVN 437
Query: 352 SQLPEHPRLKAFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGSAVKG 411
SQLP HP LKAFYRS+SPRHFV G+WNTGGSC+NTTPMSIGKEVLQ+ES DYSAG AVKG
Sbjct: 438 SQLPLHPGLKAFYRSLSPRHFVGGEWNTGGSCNNTTPMSIGKEVLQEESSDYSAGRAVKG 497
Query: 412 TGVKLLDITALSQVRDEGHISQYSITASRGVQDCLHWCLPGVPDTWNEILFAQL 465
TGVKLLDITALS +RDEGHIS++SI+ASRGVQDCLHWCLPGVPDTWNEILFA +
Sbjct: 498 TGVKLLDITALSHIRDEGHISRFSISASRGVQDCLHWCLPGVPDTWNEILFAMI 551
|
|
| TAIR|locus:2160796 TBL14 "AT5G64020" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2040696 TBL15 "AT2G37720" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2080389 TBL10 "TRICHOME BIREFRINGENCE-LIKE 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2080767 TBL8 "AT3G11570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2182157 TBL11 "TRICHOME BIREFRINGENCE-LIKE 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2096094 TBL6 "AT3G62390" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2088659 TBL1 "AT3G12060" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2036631 TBL2 "AT1G60790" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2170184 TBR [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| gw1.28.115.1 | hypothetical protein (340 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 465 | |||
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 6e-74 | |
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 8e-50 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 2e-20 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
Score = 233 bits (596), Expect = 6e-74
Identities = 98/289 (33%), Positives = 138/289 (47%), Gaps = 27/289 (9%)
Query: 182 FEGSQFLTRMQDRTLAFIGDSLGRQQFQSLMCMVTGGKERPDVEDVGKEYGLVKPRGAIR 241
F+ QFL R++ + + F+GDSL R Q++SL+C+++ + P + + ++ L
Sbjct: 4 FDAQQFLERLRGKRVVFVGDSLSRNQWESLVCLLSQVEP-PKGKTLERDGRL-------- 54
Query: 242 PNGWAYRFPSTNTTILYYWSACLCDLDPLNITNPATEYAMHLDRPPAFLRQYLHKFDVLV 301
+ +RF N TI +YWS L + D + + LD + DVLV
Sbjct: 55 ---FRFRFKDYNVTIEFYWSPFLVESD----NAEEGKRVLKLDSIDEKWSKLWPGADVLV 107
Query: 302 LNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIVSWVNSQLPEHPRLK 361
N+GH W K+ W N K A + + WV+ LP + +
Sbjct: 108 FNSGHWWLHRKVY-IGWDYCQKS----NYKEMGFLDAYRKALETWAKWVDVNLPPS-KTR 161
Query: 362 AFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGSAVK----GTGVKLL 417
F+R+ SP HF G+WNTGGSC T P+ + + T VKLL
Sbjct: 162 VFFRTFSPVHFEGGEWNTGGSCYETEPLLGSEYKGLTPEMIDIVNEVLSRAAMKTPVKLL 221
Query: 418 DITALSQVRDEGHISQYSITAS-RGVQDCLHWCLPGVPDTWNEILFAQL 465
DIT LSQ R +GH S Y + QDCLHWCLPGVPDTWNE+L A L
Sbjct: 222 DITLLSQYRKDGHPSVYRKPGPPKKEQDCLHWCLPGVPDTWNELLLALL 270
|
The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 465 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.94 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 97.61 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-112 Score=874.53 Aligned_cols=326 Identities=31% Similarity=0.627 Sum_probs=268.1
Q ss_pred ccccCCCCCcCcccceeeCCCCCCcCCCCCchhhhccccccccCCCCcccceeeecCCCCCCCCCCHHHHHHHHcCCcEE
Q 012351 118 TMLEQNQACNYAKGKWVVDDSRPLYSGAHCKQWLSQMWACRLMQRTDFAYERLRWQPKDCQMEEFEGSQFLTRMQDRTLA 197 (465)
Q Consensus 118 ~~~~~~~~CD~f~G~WV~D~~~PlY~~~tCp~fi~~~~nC~~nGRPD~~Yl~WRWqP~~C~LprFd~~~FLe~lRgKrl~ 197 (465)
++..+.+.||+|+|+||+|+++|||++++||.||+++|||++|||||++|++|||||++|+||||||.+||++|||||||
T Consensus 45 ~~~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~ 124 (387)
T PLN02629 45 SLQANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVM 124 (387)
T ss_pred CCCCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEE
Confidence 46677889999999999999999999999986799999999999999999999999999999999999999999999999
Q ss_pred EEecchhHHHHHHHHHHhhCCCCCCCcccccccccccccCCCcCCCCceEEeccCCeEEEEEecccccccCCCCCCCCCC
Q 012351 198 FIGDSLGRQQFQSLMCMVTGGKERPDVEDVGKEYGLVKPRGAIRPNGWAYRFPSTNTTILYYWSACLCDLDPLNITNPAT 277 (465)
Q Consensus 198 FVGDSL~RNq~eSLlCLL~~~~~~~~v~~~~~~~~~~~~~g~~~~~~~~~~f~~yN~TV~fyWSPFLV~~~~~~~~~~~~ 277 (465)
||||||+|||||||+|||++++++.... +..++.+ .+|+|++||+||+||||||||+.++.+ .
T Consensus 125 FVGDSL~RNQ~eSLvClL~~~~p~~~~~--------~~~~~~~----~~~~F~~yN~TV~~ywspfLV~~~~~~-----~ 187 (387)
T PLN02629 125 FVGDSLGRNQWESLICLISSSVPSTRTQ--------MSRGDPL----STFKFLDYGVSISFYKAPYLVDIDAVQ-----G 187 (387)
T ss_pred EeccccchhHHHHHHHHhhccCCCCcee--------eecCCce----EEEEeccCCEEEEEEecceEEeeecCC-----C
Confidence 9999999999999999999987643211 1112222 479999999999999999999976432 3
Q ss_pred ccceeeCCCchhhhhccCcccEEEEcCcccccCCcccCCeeEEEeCCccCCCcchhhhhhHHHHHHHHHHHHHHhhCCCC
Q 012351 278 EYAMHLDRPPAFLRQYLHKFDVLVLNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIVSWVNSQLPEH 357 (465)
Q Consensus 278 ~~~L~LD~~d~~w~~~~~~~DvLVfNtGhWW~r~~~~~~~~~~~~gg~~~~~~~~~~~~~a~~~al~T~~~wV~~~l~~~ 357 (465)
.++|+||+++.. ++.|+++|||||||||||.+++.. .+|.+++.|.... ..+++..||++||+||++||++++++
T Consensus 188 ~~~l~LD~id~~-a~~w~~~DvlVfntghWw~~~~~~-~~~~~~~~g~~~~--~~~~~~~A~r~al~T~~~wv~~~~~~- 262 (387)
T PLN02629 188 KRVLKLEEISGN-ANAWRDADVLIFNTGHWWSHQGSL-QGWDYIESGGTYY--QDMDRLVALEKALRTWAYWVDTNVDR- 262 (387)
T ss_pred ceeEEecCcchh-hhhhccCCEEEEeCccccCCCCee-EEeeeeccCCccc--cCccHHHHHHHHHHHHHHHHHhcCCC-
Confidence 467999999874 788999999999999999987643 3454443333221 23456789999999999999999987
Q ss_pred CCceEEEEeccCCccCCCCCCCCC-----CCC-ccccCCCCcccccCCcchhhhhhhc--cCCceEEeecccccccccCC
Q 012351 358 PRLKAFYRSISPRHFVNGDWNTGG-----SCD-NTTPMSIGKEVLQDESGDYSAGSAV--KGTGVKLLDITALSQVRDEG 429 (465)
Q Consensus 358 ~~t~VffRT~SP~Hfegg~Wn~GG-----~C~-~T~P~~~~e~~~~~~~~~~~~~~~~--~~~~v~lLDIT~lS~lR~Dg 429 (465)
.+++|||||+||+||+||+||+|| +|+ +|+|+..++..........++++++ .+.+|+|||||+||+|||||
T Consensus 263 ~kt~vffrT~SP~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~Dg 342 (387)
T PLN02629 263 SRTRVFFQSISPTHYNPSEWSAGASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDG 342 (387)
T ss_pred CCcEEEEEecCcccccCCCcCCCCCCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCC
Confidence 478899999999999999999875 586 4899875443211111222444444 34789999999999999999
Q ss_pred CCcccccCC-------CCCCCCcccccCCCchhHHHHHHHHhC
Q 012351 430 HISQYSITA-------SRGVQDCLHWCLPGVPDTWNEILFAQL 465 (465)
Q Consensus 430 HPs~Y~~~~-------~~~~~DClHWCLPGvpDtWNelLy~~L 465 (465)
|||+|+... +..++||+||||||||||||||||++|
T Consensus 343 HPs~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L 385 (387)
T PLN02629 343 HPSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTAL 385 (387)
T ss_pred CcccccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHH
Confidence 999997431 235689999999999999999999987
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 465 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-06 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.2 bits (119), Expect = 1e-06
Identities = 62/452 (13%), Positives = 132/452 (29%), Gaps = 142/452 (31%)
Query: 35 IPAKRKENTESLAEGQAKDKHVVEAEKNSSAENSTILTKTKENGKKNLGE-------KNS 87
+ K + E++ E K + ++ S +++S+ + + + L +N
Sbjct: 187 LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246
Query: 88 KL------EKESVD------------R-RSSADSANLSSSERIKADENSTMLEQNQACNY 128
L ++ + R + D + +++ I D +S L ++ +
Sbjct: 247 LLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306
Query: 129 AKGKWV---VDDSRPLYSGAHCKQWLSQMWACRLMQRTDFAYERLRWQP-KDCQMEEFEG 184
K++ D + + LS + R A W K ++
Sbjct: 307 L-LKYLDCRPQDLPREVLTTN-PRRLSIIAE---SIRDGLA----TWDNWKHVNCDK--- 354
Query: 185 SQFLTRMQDRTLAFIGDSLGRQQFQSL-------------MCMVTGGKERPDVEDVGKE- 230
LT + + +L + + R+ F L + ++ + DV V +
Sbjct: 355 ---LTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKL 411
Query: 231 --YGLVKPRGAIRPNGWAYRFPSTNTTILYYWSACLCDLDPLNITNPATEYAMH---LDR 285
Y LV+ +P PS +Y + EYA+H +D
Sbjct: 412 HKYSLVE----KQPKESTISIPS-----IYLELKVKLE----------NEYALHRSIVDH 452
Query: 286 ------------PPAFLRQYLHKFDVLVLNTGHH---------------------WNRGK 312
P +L QY + GHH + K
Sbjct: 453 YNIPKTFDSDDLIPPYLDQYFYSH------IGHHLKNIEHPERMTLFRMVFLDFRFLEQK 506
Query: 313 LKANRWVMH-VGGMPNTNRKIADIAGAKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRH 371
++ + + G + NT + + K + I P+ + +I
Sbjct: 507 IRHDSTAWNASGSILNT---LQQLKFYKPY----IC-------DNDPKYERLVNAI--LD 550
Query: 372 FVNGDWNTGGSCDNTTPMSIGKEVLQDESGDY 403
F+ + + + + L E
Sbjct: 551 FLP---KIEENLICSKYTDLLRIALMAEDEAI 579
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 465 | |||
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 82.14 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 82.1 |
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: BT2961-like domain: Uncharacterized protein Lp3323 species: Lactobacillus plantarum [TaxId: 1590]
Probab=82.14 E-value=0.19 Score=42.25 Aligned_cols=15 Identities=27% Similarity=0.465 Sum_probs=12.7
Q ss_pred HcCCcEEEEecchhH
Q 012351 191 MQDRTLAFIGDSLGR 205 (465)
Q Consensus 191 lRgKrl~FVGDSL~R 205 (465)
+..|||+|+|||++-
T Consensus 2 ~~~kri~~iGDSit~ 16 (207)
T d3dc7a1 2 VSFKRPAWLGDSITA 16 (207)
T ss_dssp BCCSSEEEEESTTTS
T ss_pred CCCCEEEEEehHhhc
Confidence 357899999999984
|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|