Query 012352
Match_columns 465
No_of_seqs 257 out of 2333
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 01:44:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012352.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012352hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02520 bifunctional 3-dehydr 100.0 1E-102 2E-107 833.6 48.7 454 9-463 8-461 (529)
2 PRK09310 aroDE bifunctional 3- 100.0 5.2E-90 1.1E-94 728.1 45.7 401 25-454 1-403 (477)
3 PRK02412 aroD 3-dehydroquinate 100.0 3.2E-54 7E-59 420.8 25.7 235 12-248 4-250 (253)
4 COG0710 AroD 3-dehydroquinate 100.0 2.7E-52 5.8E-57 395.7 24.3 222 23-247 1-228 (231)
5 TIGR01093 aroD 3-dehydroquinat 100.0 9.3E-52 2E-56 398.2 23.5 217 25-244 1-228 (228)
6 PF01487 DHquinase_I: Type I 3 100.0 1.2E-51 2.7E-56 396.5 20.2 217 27-245 1-224 (224)
7 PRK13575 3-dehydroquinate dehy 100.0 4.7E-50 1E-54 386.8 24.2 220 23-246 3-237 (238)
8 cd00502 DHQase_I Type I 3-dehy 100.0 9.9E-50 2.1E-54 383.6 24.4 216 25-245 1-224 (225)
9 COG0169 AroE Shikimate 5-dehyd 100.0 3.9E-49 8.5E-54 387.6 23.1 203 249-463 2-212 (283)
10 PRK13576 3-dehydroquinate dehy 100.0 3.4E-49 7.4E-54 374.1 21.7 204 22-247 1-206 (216)
11 PRK14027 quinate/shikimate deh 100.0 2.1E-48 4.6E-53 385.1 21.2 198 252-463 3-215 (283)
12 PRK12749 quinate/shikimate deh 100.0 4.8E-48 1E-52 383.7 22.6 200 249-462 3-217 (288)
13 PRK12549 shikimate 5-dehydroge 100.0 6.8E-48 1.5E-52 382.5 22.1 199 250-463 2-213 (284)
14 PRK12548 shikimate 5-dehydroge 100.0 3.2E-47 6.8E-52 379.0 22.3 201 248-462 4-220 (289)
15 PRK00258 aroE shikimate 5-dehy 100.0 1.2E-46 2.7E-51 373.0 22.7 201 250-463 2-207 (278)
16 PRK01261 aroD 3-dehydroquinate 100.0 2.2E-46 4.8E-51 358.2 23.6 215 9-247 4-226 (229)
17 PRK12550 shikimate 5-dehydroge 100.0 2.1E-45 4.6E-50 361.6 23.0 194 248-463 4-202 (272)
18 TIGR01809 Shik-DH-AROM shikima 100.0 3.5E-45 7.6E-50 363.0 21.6 192 252-455 4-204 (282)
19 TIGR00507 aroE shikimate 5-deh 100.0 3.1E-44 6.7E-49 354.5 22.1 193 254-462 1-199 (270)
20 KOG0692 Pentafunctional AROM p 100.0 3.5E-31 7.5E-36 267.3 -7.0 399 15-424 86-498 (595)
21 PF08501 Shikimate_dh_N: Shiki 99.9 1.3E-26 2.8E-31 188.4 7.0 81 258-338 1-83 (83)
22 PRK14192 bifunctional 5,10-met 99.8 9.8E-20 2.1E-24 180.2 13.5 160 256-450 38-211 (283)
23 PF01488 Shikimate_DH: Shikima 99.4 2.4E-13 5.2E-18 120.6 7.6 78 377-455 8-89 (135)
24 PRK13940 glutamyl-tRNA reducta 99.1 5.4E-11 1.2E-15 124.1 5.6 130 312-453 110-254 (414)
25 PRK08291 ectoine utilization p 99.1 1.6E-10 3.5E-15 117.5 8.1 107 330-452 96-208 (330)
26 TIGR02992 ectoine_eutC ectoine 99.1 2.5E-10 5.3E-15 116.0 8.0 106 331-452 94-205 (326)
27 COG0373 HemA Glutamyl-tRNA red 99.1 7E-10 1.5E-14 114.4 10.5 128 314-453 109-250 (414)
28 cd01065 NAD_bind_Shikimate_DH 99.0 1.7E-09 3.7E-14 97.3 10.4 91 352-454 1-94 (155)
29 PRK00045 hemA glutamyl-tRNA re 99.0 2.8E-10 6.1E-15 119.6 3.4 133 311-452 110-253 (423)
30 cd05213 NAD_bind_Glutamyl_tRNA 98.6 3.8E-08 8.2E-13 99.4 6.5 133 311-453 106-250 (311)
31 cd01078 NAD_bind_H4MPT_DH NADP 98.6 8E-08 1.7E-12 90.2 8.3 98 349-454 3-110 (194)
32 cd05311 NAD_bind_2_malic_enz N 98.6 8.5E-08 1.8E-12 92.5 8.0 89 354-455 9-111 (226)
33 PLN00203 glutamyl-tRNA reducta 98.6 8.4E-08 1.8E-12 102.8 7.1 131 313-453 194-341 (519)
34 COG0300 DltE Short-chain dehyd 98.5 3.5E-07 7.5E-12 89.7 8.4 84 379-463 4-106 (265)
35 TIGR02853 spore_dpaA dipicolin 98.5 8.3E-07 1.8E-11 88.6 11.3 95 347-454 125-222 (287)
36 COG4221 Short-chain alcohol de 98.4 1.1E-06 2.4E-11 84.3 7.8 75 379-454 4-94 (246)
37 PRK08306 dipicolinate synthase 98.3 1.3E-06 2.9E-11 87.6 7.8 75 377-453 148-222 (296)
38 TIGR01035 hemA glutamyl-tRNA r 98.3 1.5E-06 3.3E-11 91.3 7.6 127 314-452 111-251 (417)
39 PRK00676 hemA glutamyl-tRNA re 98.2 3.1E-06 6.7E-11 85.8 6.2 121 310-450 102-235 (338)
40 KOG1201 Hydroxysteroid 17-beta 98.1 4.9E-06 1.1E-10 82.0 7.3 77 377-454 34-127 (300)
41 PRK14175 bifunctional 5,10-met 98.1 2.6E-05 5.6E-10 77.5 12.0 128 273-416 54-194 (286)
42 KOG1205 Predicted dehydrogenas 98.1 4.9E-06 1.1E-10 82.3 6.5 82 377-458 8-108 (282)
43 cd01075 NAD_bind_Leu_Phe_Val_D 98.1 2.5E-05 5.5E-10 73.9 10.1 91 354-452 6-96 (200)
44 PRK06141 ornithine cyclodeamin 98.0 9.8E-06 2.1E-10 82.0 7.3 72 380-452 124-200 (314)
45 PRK07340 ornithine cyclodeamin 98.0 2.1E-05 4.7E-10 79.2 8.9 74 379-453 123-200 (304)
46 cd01080 NAD_bind_m-THF_DH_Cycl 98.0 1.5E-05 3.2E-10 73.4 7.0 58 377-452 40-98 (168)
47 PRK08618 ornithine cyclodeamin 98.0 1.4E-05 3.1E-10 81.2 7.2 73 380-453 126-204 (325)
48 PF00670 AdoHcyase_NAD: S-aden 97.9 3.2E-05 7E-10 70.3 8.2 70 377-451 19-88 (162)
49 KOG1208 Dehydrogenases with di 97.9 2.8E-05 6.1E-10 78.6 8.2 80 377-456 31-129 (314)
50 KOG0725 Reductases with broad 97.9 4.8E-05 1E-09 75.4 8.8 77 377-454 4-102 (270)
51 TIGR00518 alaDH alanine dehydr 97.9 3E-05 6.6E-10 80.2 7.5 72 379-451 165-240 (370)
52 PRK05872 short chain dehydroge 97.9 6E-05 1.3E-09 75.3 9.3 77 377-453 5-97 (296)
53 KOG1200 Mitochondrial/plastidi 97.9 3.3E-05 7.2E-10 71.6 6.6 74 379-453 12-102 (256)
54 COG3967 DltE Short-chain dehyd 97.8 3.9E-05 8.4E-10 71.8 7.0 76 379-454 3-91 (245)
55 PRK05854 short chain dehydroge 97.8 6.8E-05 1.5E-09 75.6 9.5 78 377-454 10-106 (313)
56 PRK08339 short chain dehydroge 97.8 8.3E-05 1.8E-09 72.9 9.5 76 378-453 5-97 (263)
57 PRK08862 short chain dehydroge 97.8 8E-05 1.7E-09 71.6 8.4 74 379-452 3-94 (227)
58 KOG1207 Diacetyl reductase/L-x 97.8 3.5E-05 7.6E-10 70.2 5.4 77 378-454 4-90 (245)
59 PRK07523 gluconate 5-dehydroge 97.8 9.3E-05 2E-09 71.7 8.7 76 377-453 6-99 (255)
60 PRK06139 short chain dehydroge 97.7 9.4E-05 2E-09 75.4 8.6 77 378-454 4-97 (330)
61 PRK06505 enoyl-(acyl carrier p 97.7 8.6E-05 1.9E-09 73.3 7.9 73 379-452 5-96 (271)
62 PRK06200 2,3-dihydroxy-2,3-dih 97.7 0.0001 2.3E-09 71.8 8.3 73 379-452 4-91 (263)
63 PRK05876 short chain dehydroge 97.7 0.00013 2.8E-09 72.2 8.7 75 379-454 4-96 (275)
64 PRK07984 enoyl-(acyl carrier p 97.7 0.00014 3.1E-09 71.4 8.6 73 379-452 4-95 (262)
65 COG1748 LYS9 Saccharopine dehy 97.7 6.7E-05 1.5E-09 77.5 6.5 70 382-452 2-79 (389)
66 cd05191 NAD_bind_amino_acid_DH 97.7 0.00023 5E-09 57.9 8.2 52 354-412 3-55 (86)
67 PRK08415 enoyl-(acyl carrier p 97.7 0.00014 3.1E-09 71.9 8.3 73 379-452 3-94 (274)
68 PRK08265 short chain dehydroge 97.7 0.00013 2.8E-09 71.2 8.0 74 379-452 4-91 (261)
69 PRK05867 short chain dehydroge 97.7 0.00013 2.9E-09 70.6 8.0 75 378-453 6-98 (253)
70 TIGR03325 BphB_TodD cis-2,3-di 97.6 0.00013 2.8E-09 71.2 7.7 73 379-452 3-90 (262)
71 PRK07062 short chain dehydroge 97.6 0.00018 3.9E-09 70.2 8.6 75 378-453 5-99 (265)
72 PRK07533 enoyl-(acyl carrier p 97.6 0.00017 3.7E-09 70.4 8.5 75 377-452 6-99 (258)
73 PRK06196 oxidoreductase; Provi 97.6 0.0002 4.4E-09 72.1 9.2 76 378-453 23-111 (315)
74 PRK14194 bifunctional 5,10-met 97.6 0.00046 1E-08 69.0 11.5 135 273-423 55-202 (301)
75 PRK10792 bifunctional 5,10-met 97.6 0.00058 1.3E-08 67.8 12.1 133 273-421 55-200 (285)
76 PRK06718 precorrin-2 dehydroge 97.6 0.00014 3.1E-09 69.0 7.3 76 374-452 3-81 (202)
77 PRK07063 short chain dehydroge 97.6 0.00019 4.2E-09 69.7 8.5 76 378-453 4-98 (260)
78 PRK06079 enoyl-(acyl carrier p 97.6 0.00015 3.2E-09 70.6 7.4 73 378-452 4-94 (252)
79 PRK08159 enoyl-(acyl carrier p 97.6 0.00017 3.7E-09 71.2 7.9 75 377-452 6-99 (272)
80 PRK14176 bifunctional 5,10-met 97.6 0.00064 1.4E-08 67.5 11.8 132 273-420 60-204 (287)
81 PRK07825 short chain dehydroge 97.6 0.00032 7E-09 68.8 9.6 74 379-453 3-90 (273)
82 PRK06720 hypothetical protein; 97.6 0.00027 5.8E-09 65.1 8.4 77 377-453 12-105 (169)
83 PRK05717 oxidoreductase; Valid 97.6 0.00021 4.6E-09 69.3 8.2 76 377-452 6-95 (255)
84 PRK05866 short chain dehydroge 97.6 0.00015 3.2E-09 72.5 7.1 78 376-453 35-129 (293)
85 PF03807 F420_oxidored: NADP o 97.6 9.2E-05 2E-09 61.0 4.7 66 383-452 1-72 (96)
86 PRK14982 acyl-ACP reductase; P 97.6 0.00016 3.6E-09 73.6 7.3 73 377-453 151-227 (340)
87 PRK14188 bifunctional 5,10-met 97.6 0.00046 1E-08 69.0 10.3 127 273-415 54-194 (296)
88 PRK14189 bifunctional 5,10-met 97.6 0.00048 1E-08 68.5 10.3 129 273-417 54-195 (285)
89 PRK07060 short chain dehydroge 97.6 0.00033 7.1E-09 67.1 8.9 77 377-453 5-89 (245)
90 cd05291 HicDH_like L-2-hydroxy 97.6 0.0002 4.3E-09 72.2 7.6 72 382-455 1-82 (306)
91 PRK06194 hypothetical protein; 97.5 0.00029 6.4E-09 69.5 8.7 75 379-453 4-95 (287)
92 PRK05476 S-adenosyl-L-homocyst 97.5 0.00031 6.7E-09 73.7 9.1 70 377-451 208-277 (425)
93 PRK12481 2-deoxy-D-gluconate 3 97.5 0.0003 6.5E-09 68.4 8.4 76 378-453 5-95 (251)
94 PRK08589 short chain dehydroge 97.5 0.00028 6E-09 69.4 8.3 72 379-452 4-93 (272)
95 PRK06500 short chain dehydroge 97.5 0.00032 6.9E-09 67.4 8.4 74 379-453 4-92 (249)
96 PRK08277 D-mannonate oxidoredu 97.5 0.00034 7.3E-09 68.8 8.7 77 377-453 6-99 (278)
97 KOG1014 17 beta-hydroxysteroid 97.5 0.00023 4.9E-09 70.7 7.3 73 381-453 49-138 (312)
98 PRK07109 short chain dehydroge 97.5 0.00031 6.7E-09 71.6 8.6 76 378-453 5-97 (334)
99 PRK06057 short chain dehydroge 97.5 0.00031 6.7E-09 68.2 8.2 74 379-452 5-90 (255)
100 PRK08594 enoyl-(acyl carrier p 97.5 0.00026 5.6E-09 69.2 7.6 74 378-452 4-98 (257)
101 PRK07231 fabG 3-ketoacyl-(acyl 97.5 0.00026 5.6E-09 68.0 7.5 74 379-452 3-92 (251)
102 PRK07478 short chain dehydroge 97.5 0.00029 6.3E-09 68.2 7.8 74 378-452 3-94 (254)
103 PRK07889 enoyl-(acyl carrier p 97.5 0.00024 5.3E-09 69.3 7.3 74 379-453 5-97 (256)
104 PRK06949 short chain dehydroge 97.5 0.0004 8.7E-09 67.2 8.7 77 377-453 5-98 (258)
105 PRK07067 sorbitol dehydrogenas 97.5 0.00042 9E-09 67.2 8.8 73 379-452 4-91 (257)
106 PRK06197 short chain dehydroge 97.5 0.00027 5.9E-09 70.7 7.7 77 377-453 12-107 (306)
107 PF02826 2-Hacid_dh_C: D-isome 97.5 0.00024 5.3E-09 65.8 6.8 72 376-452 31-102 (178)
108 PLN02253 xanthoxin dehydrogena 97.5 0.00033 7.2E-09 68.9 8.1 75 378-452 15-105 (280)
109 PRK06603 enoyl-(acyl carrier p 97.5 0.00033 7.2E-09 68.5 8.1 74 378-452 5-97 (260)
110 PRK08085 gluconate 5-dehydroge 97.5 0.00041 9E-09 67.2 8.7 76 377-452 5-97 (254)
111 PRK08690 enoyl-(acyl carrier p 97.5 0.00022 4.7E-09 69.9 6.7 74 379-453 4-96 (261)
112 PRK06182 short chain dehydroge 97.5 0.00021 4.5E-09 70.2 6.5 74 380-454 2-87 (273)
113 PRK12367 short chain dehydroge 97.5 0.00025 5.4E-09 69.1 6.9 75 377-452 10-90 (245)
114 PRK07453 protochlorophyllide o 97.5 0.00038 8.2E-09 70.3 8.4 74 379-452 4-94 (322)
115 PRK07791 short chain dehydroge 97.4 0.00045 9.8E-09 68.7 8.5 74 379-453 4-104 (286)
116 PLN02730 enoyl-[acyl-carrier-p 97.4 0.00023 5E-09 71.7 6.4 45 377-422 5-52 (303)
117 PLN02780 ketoreductase/ oxidor 97.4 0.00023 5E-09 72.1 6.3 45 380-424 52-97 (320)
118 PRK06719 precorrin-2 dehydroge 97.4 0.00032 7E-09 63.8 6.6 74 374-450 6-79 (157)
119 PRK09242 tropinone reductase; 97.4 0.00044 9.5E-09 67.1 7.9 76 377-453 5-100 (257)
120 PRK06997 enoyl-(acyl carrier p 97.4 0.00035 7.6E-09 68.4 7.1 73 379-452 4-95 (260)
121 PRK06180 short chain dehydroge 97.4 0.00053 1.2E-08 67.5 8.5 73 381-453 4-90 (277)
122 TIGR02356 adenyl_thiF thiazole 97.4 0.00025 5.5E-09 67.2 5.9 71 379-450 19-120 (202)
123 PRK12742 oxidoreductase; Provi 97.4 0.0007 1.5E-08 64.6 8.9 75 379-453 4-87 (237)
124 PRK05993 short chain dehydroge 97.4 0.00053 1.1E-08 67.6 8.2 73 381-454 4-89 (277)
125 PRK07370 enoyl-(acyl carrier p 97.4 0.00038 8.3E-09 68.0 7.1 73 379-452 4-98 (258)
126 PLN03209 translocon at the inn 97.4 0.00034 7.3E-09 75.7 7.1 73 379-452 78-170 (576)
127 PRK07774 short chain dehydroge 97.4 0.00055 1.2E-08 65.9 8.0 74 379-452 4-94 (250)
128 PRK08416 7-alpha-hydroxysteroi 97.4 0.00046 1E-08 67.3 7.4 74 377-451 4-97 (260)
129 PRK12936 3-ketoacyl-(acyl-carr 97.4 0.00083 1.8E-08 64.2 9.1 76 378-453 3-92 (245)
130 PRK06484 short chain dehydroge 97.4 0.00048 1E-08 74.1 8.2 75 378-452 266-354 (520)
131 PRK06125 short chain dehydroge 97.4 0.00075 1.6E-08 65.6 8.8 75 378-452 4-92 (259)
132 PRK08251 short chain dehydroge 97.4 0.00059 1.3E-08 65.7 8.0 73 381-454 2-94 (248)
133 PRK08303 short chain dehydroge 97.4 0.00046 9.9E-09 69.5 7.4 73 378-451 5-106 (305)
134 PRK06940 short chain dehydroge 97.4 0.00061 1.3E-08 67.3 8.2 71 381-452 2-87 (275)
135 PRK14191 bifunctional 5,10-met 97.4 0.0027 5.8E-08 63.1 12.6 131 273-419 53-196 (285)
136 KOG1209 1-Acyl dihydroxyaceton 97.4 0.00041 8.9E-09 65.4 6.4 74 380-453 6-93 (289)
137 cd00401 AdoHcyase S-adenosyl-L 97.3 0.00078 1.7E-08 70.5 9.2 70 377-451 198-267 (413)
138 PRK07424 bifunctional sterol d 97.3 0.00035 7.6E-09 73.1 6.5 75 378-453 175-257 (406)
139 PRK06484 short chain dehydroge 97.3 0.00048 1E-08 74.2 7.8 71 380-451 4-89 (520)
140 PRK09072 short chain dehydroge 97.3 0.0008 1.7E-08 65.6 8.6 75 379-453 3-92 (263)
141 PRK07890 short chain dehydroge 97.3 0.0006 1.3E-08 66.0 7.5 72 379-451 3-92 (258)
142 TIGR01832 kduD 2-deoxy-D-gluco 97.3 0.00088 1.9E-08 64.4 8.7 74 379-453 3-92 (248)
143 PRK07097 gluconate 5-dehydroge 97.3 0.0011 2.4E-08 64.7 9.4 75 377-452 6-98 (265)
144 PF00106 adh_short: short chai 97.3 0.00037 8.1E-09 62.7 5.6 71 382-453 1-92 (167)
145 PRK06138 short chain dehydroge 97.3 0.00085 1.8E-08 64.6 8.5 74 379-452 3-92 (252)
146 PRK07814 short chain dehydroge 97.3 0.00088 1.9E-08 65.4 8.6 75 378-453 7-99 (263)
147 PRK13394 3-hydroxybutyrate deh 97.3 0.0008 1.7E-08 65.1 8.2 76 378-453 4-96 (262)
148 PRK08340 glucose-1-dehydrogena 97.3 0.00067 1.5E-08 66.0 7.7 70 383-452 2-87 (259)
149 PRK07831 short chain dehydroge 97.3 0.00082 1.8E-08 65.4 8.3 75 378-452 14-108 (262)
150 PRK07035 short chain dehydroge 97.3 0.00069 1.5E-08 65.4 7.7 76 377-452 4-96 (252)
151 PRK09186 flagellin modificatio 97.3 0.00064 1.4E-08 65.6 7.4 46 379-424 2-48 (256)
152 TIGR01289 LPOR light-dependent 97.3 0.00084 1.8E-08 67.7 8.4 72 381-452 3-92 (314)
153 PRK06114 short chain dehydroge 97.3 0.0011 2.3E-08 64.4 8.8 75 377-452 4-97 (254)
154 PRK08643 acetoin reductase; Va 97.3 0.00091 2E-08 64.7 8.3 71 381-452 2-90 (256)
155 PRK07024 short chain dehydroge 97.3 0.00057 1.2E-08 66.4 6.8 73 381-453 2-90 (257)
156 PRK14178 bifunctional 5,10-met 97.3 0.0039 8.4E-08 61.8 12.6 133 273-421 48-193 (279)
157 PRK08213 gluconate 5-dehydroge 97.3 0.00097 2.1E-08 64.7 8.3 77 377-453 8-101 (259)
158 PRK07666 fabG 3-ketoacyl-(acyl 97.3 0.001 2.2E-08 63.7 8.3 75 379-453 5-96 (239)
159 PRK07326 short chain dehydroge 97.2 0.00086 1.9E-08 64.0 7.6 75 379-453 4-94 (237)
160 PRK06935 2-deoxy-D-gluconate 3 97.2 0.001 2.2E-08 64.7 8.1 76 377-453 11-103 (258)
161 PRK07677 short chain dehydroge 97.2 0.00096 2.1E-08 64.6 7.9 72 381-452 1-89 (252)
162 PRK08267 short chain dehydroge 97.2 0.0013 2.8E-08 63.9 8.8 72 382-453 2-89 (260)
163 PRK07454 short chain dehydroge 97.2 0.0012 2.5E-08 63.4 8.3 74 380-453 5-95 (241)
164 PRK06124 gluconate 5-dehydroge 97.2 0.0012 2.7E-08 63.8 8.5 75 377-452 7-99 (256)
165 PRK09291 short chain dehydroge 97.2 0.0012 2.7E-08 63.7 8.5 73 381-453 2-85 (257)
166 PRK06483 dihydromonapterin red 97.2 0.0013 2.8E-08 62.9 8.5 71 381-452 2-85 (236)
167 PRK14180 bifunctional 5,10-met 97.2 0.0026 5.6E-08 63.1 10.6 132 273-420 53-198 (282)
168 PRK14179 bifunctional 5,10-met 97.2 0.0021 4.5E-08 63.9 9.8 124 273-412 54-190 (284)
169 PRK07576 short chain dehydroge 97.2 0.0016 3.5E-08 63.7 9.1 76 378-453 6-98 (264)
170 PRK06398 aldose dehydrogenase; 97.2 0.00055 1.2E-08 66.8 5.6 71 378-453 3-84 (258)
171 TIGR02632 RhaD_aldol-ADH rhamn 97.2 0.0012 2.6E-08 73.7 8.9 77 377-453 410-505 (676)
172 PRK08628 short chain dehydroge 97.2 0.0012 2.6E-08 64.0 7.9 74 377-452 3-94 (258)
173 PRK07792 fabG 3-ketoacyl-(acyl 97.2 0.0015 3.2E-08 65.7 8.7 77 377-453 8-101 (306)
174 PRK12939 short chain dehydroge 97.2 0.0016 3.5E-08 62.4 8.7 76 378-453 4-96 (250)
175 PRK12429 3-hydroxybutyrate deh 97.2 0.0017 3.8E-08 62.5 8.9 74 379-453 2-93 (258)
176 PRK12829 short chain dehydroge 97.2 0.0014 3.1E-08 63.4 8.2 74 378-452 8-97 (264)
177 PRK06300 enoyl-(acyl carrier p 97.1 0.0011 2.4E-08 66.7 7.5 37 377-413 4-43 (299)
178 PF03446 NAD_binding_2: NAD bi 97.1 0.00079 1.7E-08 61.4 5.9 42 382-423 2-43 (163)
179 PRK08762 molybdopterin biosynt 97.1 0.00056 1.2E-08 71.0 5.5 71 379-450 133-234 (376)
180 PRK06841 short chain dehydroge 97.1 0.0018 3.9E-08 62.6 8.7 76 377-453 11-101 (255)
181 PRK14106 murD UDP-N-acetylmura 97.1 0.0013 2.7E-08 69.8 8.2 73 379-452 3-79 (450)
182 PTZ00075 Adenosylhomocysteinas 97.1 0.0012 2.5E-08 70.0 7.7 69 377-450 250-318 (476)
183 PRK06914 short chain dehydroge 97.1 0.002 4.4E-08 63.2 9.2 74 380-453 2-93 (280)
184 PRK06172 short chain dehydroge 97.1 0.0013 2.8E-08 63.6 7.5 74 378-452 4-95 (253)
185 PRK10538 malonic semialdehyde 97.1 0.0015 3.2E-08 63.1 7.9 71 383-453 2-86 (248)
186 TIGR01470 cysG_Nterm siroheme 97.1 0.0012 2.5E-08 62.9 7.0 76 374-452 2-80 (205)
187 PRK05855 short chain dehydroge 97.1 0.0014 3E-08 71.0 8.5 76 378-454 312-405 (582)
188 PRK08945 putative oxoacyl-(acy 97.1 0.0013 2.8E-08 63.4 7.4 74 378-452 9-103 (247)
189 PRK14172 bifunctional 5,10-met 97.1 0.0048 1E-07 61.2 11.5 133 273-421 54-199 (278)
190 PRK08263 short chain dehydroge 97.1 0.0021 4.5E-08 63.2 9.0 73 381-453 3-89 (275)
191 PF03435 Saccharop_dh: Sacchar 97.1 0.00063 1.4E-08 70.7 5.5 68 384-452 1-78 (386)
192 PRK06113 7-alpha-hydroxysteroi 97.1 0.0017 3.7E-08 62.9 8.2 75 377-452 7-99 (255)
193 PRK06482 short chain dehydroge 97.1 0.0019 4.1E-08 63.4 8.6 72 382-453 3-88 (276)
194 PRK14177 bifunctional 5,10-met 97.1 0.0047 1E-07 61.4 11.2 132 273-420 55-199 (284)
195 PRK05693 short chain dehydroge 97.1 0.0014 3.1E-08 64.2 7.6 71 382-453 2-84 (274)
196 PRK12828 short chain dehydroge 97.1 0.0015 3.3E-08 62.0 7.6 74 379-452 5-93 (239)
197 PRK05875 short chain dehydroge 97.1 0.0013 2.8E-08 64.5 7.2 75 378-452 4-97 (276)
198 PRK07832 short chain dehydroge 97.1 0.002 4.4E-08 63.1 8.6 71 382-453 1-90 (272)
199 PRK08063 enoyl-(acyl carrier p 97.1 0.0019 4.1E-08 62.1 8.2 73 380-453 3-94 (250)
200 PRK14183 bifunctional 5,10-met 97.1 0.0051 1.1E-07 61.0 11.2 132 273-420 53-197 (281)
201 TIGR00936 ahcY adenosylhomocys 97.1 0.0015 3.3E-08 68.2 7.9 70 377-451 191-260 (406)
202 PRK08217 fabG 3-ketoacyl-(acyl 97.1 0.0017 3.7E-08 62.3 7.7 74 379-452 3-93 (253)
203 PF07991 IlvN: Acetohydroxy ac 97.1 0.0014 3.1E-08 59.5 6.6 68 379-450 2-69 (165)
204 PRK05599 hypothetical protein; 97.1 0.0016 3.4E-08 63.2 7.5 69 382-452 1-88 (246)
205 PLN02928 oxidoreductase family 97.1 0.00073 1.6E-08 69.4 5.4 75 377-452 155-237 (347)
206 PRK12384 sorbitol-6-phosphate 97.0 0.0022 4.7E-08 62.2 8.3 73 381-454 2-94 (259)
207 KOG4169 15-hydroxyprostaglandi 97.0 0.0011 2.3E-08 63.2 5.8 76 378-453 2-95 (261)
208 PRK06179 short chain dehydroge 97.0 0.00072 1.6E-08 66.1 4.9 69 381-453 4-85 (270)
209 PRK14166 bifunctional 5,10-met 97.0 0.003 6.5E-08 62.7 9.1 133 273-421 52-198 (282)
210 PRK14187 bifunctional 5,10-met 97.0 0.0055 1.2E-07 61.2 11.0 133 273-421 54-201 (294)
211 PRK12475 thiamine/molybdopteri 97.0 0.0011 2.4E-08 67.8 6.3 37 378-414 21-58 (338)
212 TIGR03206 benzo_BadH 2-hydroxy 97.0 0.0022 4.8E-08 61.6 8.0 73 380-452 2-91 (250)
213 PRK05653 fabG 3-ketoacyl-(acyl 97.0 0.0016 3.4E-08 62.1 6.9 75 379-453 3-94 (246)
214 PRK05650 short chain dehydroge 97.0 0.0022 4.7E-08 62.8 8.0 73 382-454 1-90 (270)
215 PRK14190 bifunctional 5,10-met 97.0 0.0057 1.2E-07 60.8 10.9 133 273-421 54-199 (284)
216 PRK05884 short chain dehydroge 97.0 0.002 4.4E-08 61.5 7.7 70 383-452 2-80 (223)
217 PRK14182 bifunctional 5,10-met 97.0 0.0044 9.6E-08 61.5 10.1 125 273-418 52-195 (282)
218 PRK14173 bifunctional 5,10-met 97.0 0.0041 8.8E-08 61.9 9.8 132 273-420 51-195 (287)
219 PF13241 NAD_binding_7: Putati 97.0 0.0014 3.1E-08 55.1 5.7 65 377-450 3-69 (103)
220 PRK05479 ketol-acid reductoiso 97.0 0.0017 3.8E-08 65.9 7.3 70 377-450 13-82 (330)
221 PRK08936 glucose-1-dehydrogena 97.0 0.0025 5.4E-08 62.0 8.2 75 378-453 4-97 (261)
222 PRK12823 benD 1,6-dihydroxycyc 97.0 0.0023 5E-08 62.0 8.0 74 378-452 5-95 (260)
223 PF01210 NAD_Gly3P_dh_N: NAD-d 97.0 0.0012 2.6E-08 59.9 5.5 69 383-452 1-80 (157)
224 PRK08324 short chain dehydroge 97.0 0.0026 5.7E-08 71.1 9.4 76 378-453 419-510 (681)
225 PRK08278 short chain dehydroge 97.0 0.0021 4.6E-08 63.2 7.8 75 379-453 4-102 (273)
226 PLN02494 adenosylhomocysteinas 97.0 0.0018 4E-08 68.4 7.5 69 377-450 250-318 (477)
227 PRK07856 short chain dehydroge 97.0 0.0013 2.8E-08 63.7 6.0 70 378-452 3-86 (252)
228 PRK14171 bifunctional 5,10-met 97.0 0.0068 1.5E-07 60.3 11.0 132 273-420 54-199 (288)
229 PRK06046 alanine dehydrogenase 97.0 0.0015 3.2E-08 66.6 6.6 70 381-452 129-204 (326)
230 PRK12826 3-ketoacyl-(acyl-carr 97.0 0.0022 4.8E-08 61.5 7.4 74 379-452 4-94 (251)
231 PRK14169 bifunctional 5,10-met 97.0 0.0062 1.3E-07 60.5 10.6 133 271-419 50-195 (282)
232 PRK07201 short chain dehydroge 97.0 0.0024 5.1E-08 70.8 8.6 76 378-453 368-460 (657)
233 PRK12747 short chain dehydroge 97.0 0.0021 4.6E-08 62.1 7.3 45 380-424 3-49 (252)
234 PRK06523 short chain dehydroge 97.0 0.0011 2.3E-08 64.4 5.2 73 377-452 5-88 (260)
235 TIGR03589 PseB UDP-N-acetylglu 97.0 0.0019 4.1E-08 65.5 7.2 73 379-452 2-85 (324)
236 PRK07074 short chain dehydroge 96.9 0.0037 7.9E-08 60.5 8.9 72 381-452 2-88 (257)
237 PLN02516 methylenetetrahydrofo 96.9 0.0058 1.3E-07 61.1 10.2 134 273-422 61-209 (299)
238 PRK14170 bifunctional 5,10-met 96.9 0.0057 1.2E-07 60.7 10.0 132 273-420 53-197 (284)
239 PRK14186 bifunctional 5,10-met 96.9 0.0059 1.3E-07 61.1 10.1 133 273-421 54-199 (297)
240 PF02423 OCD_Mu_crystall: Orni 96.9 0.0015 3.3E-08 66.1 5.8 72 381-453 128-204 (313)
241 PRK13243 glyoxylate reductase; 96.9 0.002 4.4E-08 65.8 6.7 70 377-452 146-215 (333)
242 PRK12938 acetyacetyl-CoA reduc 96.9 0.0033 7.2E-08 60.3 7.9 73 380-452 2-92 (246)
243 PRK06823 ornithine cyclodeamin 96.9 0.0028 6.1E-08 64.2 7.6 71 381-452 128-203 (315)
244 PRK08264 short chain dehydroge 96.9 0.0018 4E-08 61.8 6.0 70 379-452 4-84 (238)
245 PRK08993 2-deoxy-D-gluconate 3 96.9 0.0041 8.8E-08 60.3 8.4 76 377-453 6-97 (253)
246 PRK06407 ornithine cyclodeamin 96.9 0.0026 5.6E-08 64.1 7.2 72 380-452 116-193 (301)
247 PRK06181 short chain dehydroge 96.9 0.0036 7.9E-08 60.8 8.1 73 382-454 2-91 (263)
248 PRK08644 thiamine biosynthesis 96.9 0.002 4.4E-08 61.5 6.1 36 378-413 25-61 (212)
249 PRK07806 short chain dehydroge 96.9 0.0032 7E-08 60.5 7.6 75 379-453 4-96 (248)
250 PRK14181 bifunctional 5,10-met 96.9 0.0064 1.4E-07 60.5 9.7 135 271-421 46-198 (287)
251 PRK07904 short chain dehydroge 96.8 0.0033 7E-08 61.3 7.5 73 380-452 7-98 (253)
252 PRK13403 ketol-acid reductoiso 96.8 0.0029 6.2E-08 63.9 7.1 70 377-451 12-81 (335)
253 PRK06463 fabG 3-ketoacyl-(acyl 96.8 0.0035 7.6E-08 60.7 7.7 73 378-452 4-90 (255)
254 PRK14185 bifunctional 5,10-met 96.8 0.01 2.3E-07 59.2 11.0 133 273-421 53-202 (293)
255 PRK08226 short chain dehydroge 96.8 0.005 1.1E-07 59.8 8.8 73 379-453 4-94 (263)
256 PRK08017 oxidoreductase; Provi 96.8 0.0046 1E-07 59.6 8.4 72 382-454 3-87 (256)
257 PRK05565 fabG 3-ketoacyl-(acyl 96.8 0.0039 8.5E-08 59.5 7.8 74 379-452 3-94 (247)
258 PRK08177 short chain dehydroge 96.8 0.0036 7.9E-08 59.5 7.6 72 382-453 2-83 (225)
259 PRK09424 pntA NAD(P) transhydr 96.8 0.0037 8E-08 67.2 8.3 48 379-427 163-210 (509)
260 PRK14193 bifunctional 5,10-met 96.8 0.011 2.5E-07 58.7 11.1 131 273-419 54-199 (284)
261 PRK08642 fabG 3-ketoacyl-(acyl 96.8 0.0037 8E-08 60.1 7.5 74 379-452 3-92 (253)
262 PRK14167 bifunctional 5,10-met 96.8 0.008 1.7E-07 60.1 9.9 132 273-420 53-201 (297)
263 PLN02616 tetrahydrofolate dehy 96.8 0.0093 2E-07 60.9 10.4 133 273-421 125-272 (364)
264 PRK00141 murD UDP-N-acetylmura 96.8 0.0034 7.3E-08 67.2 7.7 74 378-452 12-85 (473)
265 PRK05597 molybdopterin biosynt 96.8 0.0021 4.5E-08 66.2 5.8 36 379-414 26-62 (355)
266 PRK07502 cyclohexadienyl dehyd 96.8 0.0037 8E-08 63.0 7.5 70 381-452 6-77 (307)
267 TIGR00872 gnd_rel 6-phosphoglu 96.8 0.0035 7.5E-08 63.0 7.2 41 383-423 2-42 (298)
268 PRK06101 short chain dehydroge 96.8 0.0069 1.5E-07 58.2 9.1 42 382-423 2-44 (240)
269 PRK07688 thiamine/molybdopteri 96.8 0.0025 5.4E-08 65.2 6.3 37 378-414 21-58 (339)
270 PRK07775 short chain dehydroge 96.8 0.0062 1.4E-07 59.9 8.9 75 379-453 8-99 (274)
271 TIGR02415 23BDH acetoin reduct 96.7 0.0053 1.2E-07 59.1 8.2 71 382-452 1-88 (254)
272 PRK12746 short chain dehydroge 96.7 0.0038 8.1E-08 60.3 7.2 46 379-424 4-51 (254)
273 PRK06198 short chain dehydroge 96.7 0.0034 7.4E-08 60.8 6.9 76 378-453 3-96 (260)
274 TIGR02685 pter_reduc_Leis pter 96.7 0.0055 1.2E-07 59.9 8.2 71 382-452 2-95 (267)
275 PRK06128 oxidoreductase; Provi 96.7 0.0043 9.4E-08 62.0 7.6 75 378-453 52-146 (300)
276 PRK07634 pyrroline-5-carboxyla 96.7 0.0036 7.8E-08 60.6 6.8 69 381-452 4-77 (245)
277 PF00056 Ldh_1_N: lactate/mala 96.7 0.0078 1.7E-07 53.7 8.3 73 383-456 2-84 (141)
278 TIGR02371 ala_DH_arch alanine 96.7 0.004 8.7E-08 63.4 7.2 71 381-452 128-203 (325)
279 PRK09135 pteridine reductase; 96.7 0.007 1.5E-07 57.9 8.5 75 379-453 4-97 (249)
280 PRK06199 ornithine cyclodeamin 96.7 0.003 6.6E-08 65.6 6.3 71 381-452 155-234 (379)
281 PRK07589 ornithine cyclodeamin 96.7 0.0035 7.6E-08 64.3 6.5 70 381-451 129-203 (346)
282 PRK12937 short chain dehydroge 96.7 0.0072 1.6E-07 57.8 8.4 74 379-452 3-94 (245)
283 COG1028 FabG Dehydrogenases wi 96.7 0.005 1.1E-07 59.3 7.3 74 379-453 3-98 (251)
284 COG0190 FolD 5,10-methylene-te 96.7 0.015 3.3E-07 57.3 10.7 141 257-416 36-192 (283)
285 PRK14184 bifunctional 5,10-met 96.7 0.015 3.3E-07 57.9 10.7 128 273-422 53-203 (286)
286 PRK12859 3-ketoacyl-(acyl-carr 96.6 0.0049 1.1E-07 59.9 7.3 35 378-412 3-40 (256)
287 PRK08703 short chain dehydroge 96.6 0.0047 1E-07 59.2 7.0 47 378-424 3-50 (239)
288 cd01487 E1_ThiF_like E1_ThiF_l 96.6 0.0037 8E-08 57.8 6.0 32 383-414 1-33 (174)
289 PRK09260 3-hydroxybutyryl-CoA 96.6 0.0036 7.8E-08 62.4 6.3 41 382-422 2-42 (288)
290 PLN02897 tetrahydrofolate dehy 96.6 0.011 2.4E-07 60.1 9.8 132 273-420 108-254 (345)
291 TIGR01963 PHB_DH 3-hydroxybuty 96.6 0.0081 1.7E-07 57.7 8.6 71 381-452 1-89 (255)
292 PRK12744 short chain dehydroge 96.6 0.008 1.7E-07 58.3 8.6 76 378-453 5-101 (257)
293 COG0569 TrkA K+ transport syst 96.6 0.0053 1.1E-07 59.2 7.1 71 382-452 1-77 (225)
294 PRK08261 fabG 3-ketoacyl-(acyl 96.6 0.0073 1.6E-07 64.0 8.7 74 378-452 207-295 (450)
295 PRK07985 oxidoreductase; Provi 96.6 0.0049 1.1E-07 61.5 7.0 74 378-452 46-139 (294)
296 COG1648 CysG Siroheme synthase 96.6 0.0072 1.6E-07 57.6 7.7 76 374-450 5-81 (210)
297 PLN02989 cinnamyl-alcohol dehy 96.6 0.0039 8.5E-08 62.7 6.2 72 380-452 4-88 (325)
298 PRK12743 oxidoreductase; Provi 96.6 0.0078 1.7E-07 58.4 8.1 72 381-453 2-92 (256)
299 PRK09134 short chain dehydroge 96.6 0.0095 2.1E-07 57.8 8.8 75 378-452 6-98 (258)
300 PRK05600 thiamine biosynthesis 96.6 0.0037 8E-08 64.8 6.1 35 379-413 39-74 (370)
301 PRK12748 3-ketoacyl-(acyl-carr 96.6 0.0063 1.4E-07 59.0 7.4 35 379-413 3-40 (256)
302 PRK06701 short chain dehydroge 96.6 0.0065 1.4E-07 60.5 7.6 77 377-453 42-136 (290)
303 PRK14618 NAD(P)H-dependent gly 96.6 0.0048 1E-07 62.7 6.7 42 382-423 5-46 (328)
304 TIGR02354 thiF_fam2 thiamine b 96.6 0.0063 1.4E-07 57.6 7.0 36 378-413 18-54 (200)
305 PRK06171 sorbitol-6-phosphate 96.5 0.0017 3.7E-08 63.2 3.2 73 377-452 5-88 (266)
306 TIGR00561 pntA NAD(P) transhyd 96.5 0.0064 1.4E-07 65.3 7.7 47 380-427 163-209 (511)
307 PRK09140 2-dehydro-3-deoxy-6-p 96.5 0.05 1.1E-06 51.8 13.0 119 26-172 12-130 (206)
308 PRK02472 murD UDP-N-acetylmura 96.5 0.0048 1E-07 65.3 6.7 73 379-452 3-79 (447)
309 PRK08293 3-hydroxybutyryl-CoA 96.5 0.0066 1.4E-07 60.5 7.3 41 382-422 4-44 (287)
310 PRK07069 short chain dehydroge 96.5 0.0068 1.5E-07 58.2 7.2 69 384-453 2-91 (251)
311 PRK12480 D-lactate dehydrogena 96.5 0.0051 1.1E-07 62.8 6.6 41 377-417 142-182 (330)
312 COG1064 AdhP Zn-dependent alco 96.5 0.0077 1.7E-07 61.2 7.7 69 380-450 166-238 (339)
313 PRK05579 bifunctional phosphop 96.5 0.0049 1.1E-07 64.5 6.4 87 354-454 170-280 (399)
314 COG2084 MmsB 3-hydroxyisobutyr 96.5 0.0044 9.6E-08 61.7 5.8 44 383-426 2-45 (286)
315 PLN02819 lysine-ketoglutarate 96.5 0.0049 1.1E-07 71.2 6.9 73 380-453 568-660 (1042)
316 PRK14174 bifunctional 5,10-met 96.5 0.025 5.5E-07 56.6 11.2 135 273-423 53-206 (295)
317 PLN00015 protochlorophyllide r 96.5 0.0066 1.4E-07 61.0 7.0 68 385-452 1-86 (308)
318 PRK06550 fabG 3-ketoacyl-(acyl 96.5 0.0026 5.7E-08 60.6 3.9 71 379-452 3-78 (235)
319 cd08230 glucose_DH Glucose deh 96.4 0.01 2.2E-07 60.6 8.3 70 380-451 172-248 (355)
320 TIGR01829 AcAcCoA_reduct aceto 96.4 0.01 2.2E-07 56.6 7.7 70 382-452 1-89 (242)
321 PRK05690 molybdopterin biosynt 96.4 0.0055 1.2E-07 59.9 5.9 36 378-413 29-65 (245)
322 PRK05557 fabG 3-ketoacyl-(acyl 96.4 0.014 3E-07 55.6 8.6 74 379-453 3-95 (248)
323 PRK07530 3-hydroxybutyryl-CoA 96.4 0.0066 1.4E-07 60.6 6.6 40 382-421 5-44 (292)
324 cd00757 ThiF_MoeB_HesA_family 96.4 0.0052 1.1E-07 59.3 5.6 34 379-412 19-53 (228)
325 TIGR01505 tartro_sem_red 2-hyd 96.4 0.0045 9.7E-08 61.8 5.3 40 383-422 1-40 (291)
326 PRK15461 NADH-dependent gamma- 96.4 0.0079 1.7E-07 60.3 7.0 41 383-423 3-43 (296)
327 PRK12935 acetoacetyl-CoA reduc 96.4 0.012 2.7E-07 56.4 8.0 75 379-453 4-96 (247)
328 PRK15469 ghrA bifunctional gly 96.4 0.0034 7.3E-08 63.6 4.1 40 377-416 132-171 (312)
329 PRK00094 gpsA NAD(P)H-dependen 96.3 0.0073 1.6E-07 60.9 6.5 41 383-423 3-43 (325)
330 PRK08655 prephenate dehydrogen 96.3 0.0088 1.9E-07 63.4 7.2 66 383-451 2-68 (437)
331 cd01076 NAD_bind_1_Glu_DH NAD( 96.3 0.027 5.8E-07 54.4 9.9 90 354-453 11-118 (227)
332 PLN00141 Tic62-NAD(P)-related 96.3 0.0054 1.2E-07 59.6 5.1 75 377-452 13-96 (251)
333 PRK06077 fabG 3-ketoacyl-(acyl 96.3 0.016 3.6E-07 55.5 8.5 74 379-453 4-96 (252)
334 PRK09880 L-idonate 5-dehydroge 96.3 0.015 3.3E-07 59.1 8.6 71 380-451 169-245 (343)
335 PRK00066 ldh L-lactate dehydro 96.3 0.011 2.4E-07 60.0 7.4 75 380-455 5-87 (315)
336 COG1052 LdhA Lactate dehydroge 96.3 0.0075 1.6E-07 61.3 6.1 41 375-415 140-180 (324)
337 PRK14168 bifunctional 5,10-met 96.3 0.025 5.5E-07 56.6 9.7 131 273-419 55-204 (297)
338 PRK06130 3-hydroxybutyryl-CoA 96.3 0.01 2.3E-07 59.7 7.1 41 382-422 5-45 (311)
339 PRK09730 putative NAD(P)-bindi 96.3 0.011 2.3E-07 56.6 6.9 70 382-452 2-90 (247)
340 PRK07417 arogenate dehydrogena 96.3 0.012 2.6E-07 58.5 7.3 67 383-452 2-68 (279)
341 PF13460 NAD_binding_10: NADH( 96.3 0.0032 7E-08 57.7 3.1 65 384-452 1-71 (183)
342 PRK07066 3-hydroxybutyryl-CoA 96.2 0.01 2.2E-07 60.3 6.9 40 382-421 8-47 (321)
343 PLN02896 cinnamyl-alcohol dehy 96.2 0.013 2.7E-07 60.0 7.7 73 379-452 8-90 (353)
344 PRK15116 sulfur acceptor prote 96.2 0.012 2.7E-07 58.1 7.1 36 378-413 27-63 (268)
345 PRK12827 short chain dehydroge 96.2 0.013 2.9E-07 55.9 7.4 75 379-453 4-99 (249)
346 PRK08220 2,3-dihydroxybenzoate 96.2 0.0079 1.7E-07 57.9 5.7 38 377-414 4-42 (252)
347 TIGR02622 CDP_4_6_dhtase CDP-g 96.2 0.0081 1.8E-07 61.3 6.1 73 380-452 3-86 (349)
348 PRK12491 pyrroline-5-carboxyla 96.2 0.0092 2E-07 59.2 6.2 66 382-450 3-72 (272)
349 COG2423 Predicted ornithine cy 96.2 0.01 2.2E-07 60.4 6.6 71 381-452 130-206 (330)
350 COG2085 Predicted dinucleotide 96.2 0.0099 2.1E-07 56.3 6.0 44 382-425 2-46 (211)
351 PRK07041 short chain dehydroge 96.2 0.016 3.5E-07 54.9 7.7 69 385-453 1-81 (230)
352 TIGR01915 npdG NADPH-dependent 96.2 0.01 2.2E-07 56.8 6.2 41 383-423 2-43 (219)
353 PRK12745 3-ketoacyl-(acyl-carr 96.2 0.015 3.3E-07 56.0 7.5 72 381-453 2-92 (256)
354 PRK06953 short chain dehydroge 96.2 0.012 2.6E-07 55.8 6.6 70 382-452 2-81 (222)
355 PRK08219 short chain dehydroge 96.2 0.019 4E-07 54.1 8.0 71 381-452 3-82 (227)
356 cd00755 YgdL_like Family of ac 96.2 0.0095 2.1E-07 57.7 5.9 35 379-413 9-44 (231)
357 PLN02986 cinnamyl-alcohol dehy 96.2 0.0096 2.1E-07 59.9 6.2 72 380-452 4-88 (322)
358 PRK06035 3-hydroxyacyl-CoA deh 96.1 0.014 3E-07 58.3 7.2 39 382-420 4-42 (291)
359 PRK11880 pyrroline-5-carboxyla 96.1 0.012 2.5E-07 57.9 6.6 44 382-425 3-49 (267)
360 PRK09599 6-phosphogluconate de 96.1 0.013 2.7E-07 59.0 7.0 40 383-422 2-41 (301)
361 TIGR00465 ilvC ketol-acid redu 96.1 0.014 3.1E-07 59.1 7.3 68 379-451 1-69 (314)
362 PRK06129 3-hydroxyacyl-CoA deh 96.1 0.014 3E-07 58.9 7.2 39 382-420 3-41 (308)
363 PRK12490 6-phosphogluconate de 96.1 0.013 2.8E-07 58.9 6.9 40 383-422 2-41 (299)
364 PRK03369 murD UDP-N-acetylmura 96.1 0.014 3.1E-07 62.7 7.7 73 379-453 10-82 (488)
365 COG1086 Predicted nucleoside-d 96.1 0.0077 1.7E-07 64.5 5.4 83 378-461 247-345 (588)
366 PRK07574 formate dehydrogenase 96.1 0.0082 1.8E-07 62.5 5.5 38 377-414 188-225 (385)
367 PRK11559 garR tartronate semia 96.1 0.01 2.3E-07 59.2 6.1 41 382-422 3-43 (296)
368 TIGR01108 oadA oxaloacetate de 96.1 0.63 1.4E-05 51.2 20.1 210 34-246 19-246 (582)
369 cd07937 DRE_TIM_PC_TC_5S Pyruv 96.1 1.4 3.1E-05 43.7 21.1 212 34-246 19-246 (275)
370 PF02737 3HCDH_N: 3-hydroxyacy 96.1 0.015 3.3E-07 54.0 6.6 41 383-423 1-41 (180)
371 PRK06947 glucose-1-dehydrogena 96.1 0.015 3.2E-07 55.8 6.9 71 382-453 3-92 (248)
372 cd05212 NAD_bind_m-THF_DH_Cycl 96.1 0.026 5.6E-07 50.4 7.8 39 377-415 24-63 (140)
373 PLN03139 formate dehydrogenase 96.1 0.0082 1.8E-07 62.5 5.2 39 377-415 195-233 (386)
374 PRK01438 murD UDP-N-acetylmura 96.0 0.02 4.3E-07 61.3 8.3 74 377-452 12-89 (480)
375 PF10727 Rossmann-like: Rossma 96.0 0.0048 1E-07 54.1 3.0 45 382-426 11-56 (127)
376 PLN02350 phosphogluconate dehy 96.0 0.016 3.4E-07 62.2 7.4 42 382-423 7-48 (493)
377 PRK08410 2-hydroxyacid dehydro 96.0 0.0092 2E-07 60.4 5.1 38 377-414 141-178 (311)
378 PRK05786 fabG 3-ketoacyl-(acyl 96.0 0.019 4.1E-07 54.7 7.1 46 379-424 3-49 (238)
379 PRK07102 short chain dehydroge 96.0 0.017 3.8E-07 55.3 6.8 71 382-452 2-87 (243)
380 COG0111 SerA Phosphoglycerate 96.0 0.0076 1.6E-07 61.3 4.4 120 292-413 35-174 (324)
381 PRK13656 trans-2-enoyl-CoA red 96.0 0.02 4.3E-07 59.3 7.5 103 347-454 10-144 (398)
382 PF02254 TrkA_N: TrkA-N domain 96.0 0.024 5.2E-07 48.1 6.9 66 384-450 1-71 (116)
383 PRK07577 short chain dehydroge 96.0 0.0045 9.8E-08 58.8 2.6 37 380-416 2-39 (234)
384 PRK12825 fabG 3-ketoacyl-(acyl 95.9 0.027 5.9E-07 53.5 8.0 75 379-453 4-96 (249)
385 PRK06436 glycerate dehydrogena 95.9 0.01 2.2E-07 59.9 5.1 38 377-414 118-155 (303)
386 PRK07679 pyrroline-5-carboxyla 95.9 0.015 3.3E-07 57.7 6.3 45 382-426 4-53 (279)
387 PRK07531 bifunctional 3-hydrox 95.9 0.017 3.7E-07 62.2 7.1 40 382-421 5-44 (495)
388 COG0345 ProC Pyrroline-5-carbo 95.9 0.016 3.6E-07 57.1 6.4 46 382-427 2-51 (266)
389 PLN02662 cinnamyl-alcohol dehy 95.9 0.014 3.1E-07 58.3 6.1 70 381-451 4-86 (322)
390 PRK06522 2-dehydropantoate 2-r 95.9 0.023 4.9E-07 56.7 7.5 67 383-452 2-77 (304)
391 PRK06487 glycerate dehydrogena 95.9 0.0091 2E-07 60.6 4.5 37 377-413 144-180 (317)
392 COG0499 SAM1 S-adenosylhomocys 95.8 0.022 4.7E-07 57.8 6.9 69 377-451 205-274 (420)
393 cd00452 KDPG_aldolase KDPG and 95.8 0.17 3.7E-06 47.3 12.7 118 26-172 6-123 (190)
394 PF13561 adh_short_C2: Enoyl-( 95.8 0.0094 2E-07 57.3 4.2 63 390-453 6-85 (241)
395 PRK06123 short chain dehydroge 95.8 0.023 4.9E-07 54.5 6.9 72 381-452 2-91 (248)
396 PLN02650 dihydroflavonol-4-red 95.8 0.015 3.2E-07 59.4 5.8 71 380-451 4-87 (351)
397 PRK13302 putative L-aspartate 95.8 0.024 5.1E-07 56.3 7.0 69 380-452 5-78 (271)
398 PRK07680 late competence prote 95.8 0.016 3.4E-07 57.3 5.8 42 383-424 2-47 (273)
399 PF02719 Polysacc_synt_2: Poly 95.8 0.017 3.6E-07 57.7 5.8 68 384-452 1-88 (293)
400 PRK14619 NAD(P)H-dependent gly 95.7 0.012 2.6E-07 59.3 4.8 35 381-415 4-38 (308)
401 PRK08605 D-lactate dehydrogena 95.7 0.011 2.4E-07 60.3 4.6 40 377-416 142-182 (332)
402 PRK15409 bifunctional glyoxyla 95.7 0.02 4.3E-07 58.3 6.4 38 377-414 141-179 (323)
403 PRK06476 pyrroline-5-carboxyla 95.7 0.016 3.5E-07 56.8 5.5 64 383-450 2-70 (258)
404 PLN00198 anthocyanidin reducta 95.7 0.017 3.6E-07 58.6 5.8 73 378-451 6-90 (338)
405 PF02882 THF_DHG_CYH_C: Tetrah 95.7 0.04 8.7E-07 50.3 7.6 55 355-420 21-76 (160)
406 PRK15438 erythronate-4-phospha 95.7 0.018 3.9E-07 59.7 5.9 38 376-413 111-148 (378)
407 PLN02214 cinnamoyl-CoA reducta 95.7 0.021 4.5E-07 58.3 6.4 73 379-452 8-92 (342)
408 PRK05562 precorrin-2 dehydroge 95.7 0.03 6.4E-07 53.9 7.0 41 374-414 18-58 (223)
409 PRK06545 prephenate dehydrogen 95.7 0.021 4.6E-07 58.9 6.4 69 382-452 1-71 (359)
410 cd00958 DhnA Class I fructose- 95.7 0.21 4.5E-06 48.2 12.9 156 34-200 19-186 (235)
411 PRK12330 oxaloacetate decarbox 95.7 1.8 3.8E-05 46.7 20.8 231 12-247 5-255 (499)
412 COG0287 TyrA Prephenate dehydr 95.7 0.023 5.1E-07 56.5 6.3 72 381-453 3-76 (279)
413 PRK12824 acetoacetyl-CoA reduc 95.6 0.057 1.2E-06 51.5 8.8 70 382-452 3-91 (245)
414 PLN02686 cinnamoyl-CoA reducta 95.6 0.024 5.2E-07 58.5 6.5 45 377-421 49-94 (367)
415 PRK09496 trkA potassium transp 95.6 0.034 7.3E-07 58.8 7.8 69 383-451 2-75 (453)
416 PLN02256 arogenate dehydrogena 95.6 0.03 6.6E-07 56.4 7.0 69 380-452 35-103 (304)
417 PLN02688 pyrroline-5-carboxyla 95.6 0.022 4.9E-07 55.9 5.8 40 383-422 2-46 (266)
418 KOG0409 Predicted dehydrogenas 95.5 0.046 1E-06 54.3 7.8 44 380-423 34-77 (327)
419 PF01408 GFO_IDH_MocA: Oxidore 95.5 0.026 5.7E-07 48.0 5.5 68 383-452 2-73 (120)
420 TIGR00873 gnd 6-phosphoglucona 95.5 0.033 7.2E-07 59.5 7.2 40 384-423 2-41 (467)
421 cd05211 NAD_bind_Glu_Leu_Phe_V 95.5 0.085 1.8E-06 50.6 9.3 93 354-453 3-109 (217)
422 PRK13581 D-3-phosphoglycerate 95.5 0.028 6E-07 61.0 6.7 70 377-452 136-205 (526)
423 cd04740 DHOD_1B_like Dihydroor 95.5 0.43 9.3E-06 47.7 14.8 84 25-117 91-185 (296)
424 PRK06932 glycerate dehydrogena 95.5 0.023 5E-07 57.6 5.6 38 377-414 143-180 (314)
425 KOG0024 Sorbitol dehydrogenase 95.4 0.035 7.6E-07 55.7 6.6 73 380-453 169-254 (354)
426 PRK00257 erythronate-4-phospha 95.4 0.023 5.1E-07 59.0 5.7 38 377-414 112-149 (381)
427 KOG0069 Glyoxylate/hydroxypyru 95.4 0.023 4.9E-07 57.7 5.4 46 376-421 157-202 (336)
428 PRK09496 trkA potassium transp 95.4 0.054 1.2E-06 57.2 8.7 73 379-451 229-307 (453)
429 PTZ00082 L-lactate dehydrogena 95.4 0.041 8.8E-07 56.0 7.3 74 380-455 5-88 (321)
430 PRK13304 L-aspartate dehydroge 95.4 0.034 7.4E-07 54.9 6.6 67 383-452 3-72 (265)
431 CHL00194 ycf39 Ycf39; Provisio 95.4 0.024 5.3E-07 57.0 5.7 67 383-451 2-74 (317)
432 PLN02653 GDP-mannose 4,6-dehyd 95.4 0.0094 2E-07 60.5 2.6 38 378-415 3-41 (340)
433 PLN02306 hydroxypyruvate reduc 95.3 0.027 5.8E-07 58.7 5.8 39 377-415 161-200 (386)
434 cd04726 KGPDC_HPS 3-Keto-L-gul 95.3 0.95 2.1E-05 42.3 15.9 130 24-172 1-132 (202)
435 PLN02586 probable cinnamyl alc 95.3 0.045 9.8E-07 56.3 7.3 71 380-451 183-257 (360)
436 cd05292 LDH_2 A subgroup of L- 95.3 0.053 1.2E-06 54.8 7.6 71 383-455 2-81 (308)
437 cd00945 Aldolase_Class_I Class 95.3 1.9 4.1E-05 39.6 17.7 152 34-200 11-179 (201)
438 PRK06924 short chain dehydroge 95.3 0.031 6.6E-07 53.8 5.7 43 382-424 2-46 (251)
439 PRK07578 short chain dehydroge 95.3 0.028 6.1E-07 52.3 5.2 62 383-453 2-67 (199)
440 PTZ00142 6-phosphogluconate de 95.3 0.047 1E-06 58.4 7.5 41 383-423 3-43 (470)
441 PRK08328 hypothetical protein; 95.3 0.017 3.7E-07 55.9 3.8 36 379-414 25-61 (231)
442 cd00958 DhnA Class I fructose- 95.3 0.59 1.3E-05 45.0 14.6 138 27-170 65-211 (235)
443 TIGR01692 HIBADH 3-hydroxyisob 95.2 0.022 4.7E-07 56.8 4.5 37 386-422 1-37 (288)
444 TIGR03366 HpnZ_proposed putati 95.2 0.063 1.4E-06 53.0 7.8 71 380-451 120-197 (280)
445 PRK12331 oxaloacetate decarbox 95.2 4.9 0.00011 42.8 22.2 231 12-247 4-252 (448)
446 PRK07819 3-hydroxybutyryl-CoA 95.1 0.05 1.1E-06 54.4 6.8 39 382-420 6-44 (286)
447 KOG1199 Short-chain alcohol de 95.1 0.04 8.6E-07 50.5 5.4 75 379-453 7-95 (260)
448 KOG1210 Predicted 3-ketosphing 95.1 0.044 9.6E-07 54.8 6.1 73 382-454 34-125 (331)
449 COG1063 Tdh Threonine dehydrog 95.1 0.074 1.6E-06 54.7 8.1 70 382-451 170-248 (350)
450 TIGR01327 PGDH D-3-phosphoglyc 95.1 0.043 9.2E-07 59.6 6.5 71 377-452 134-204 (525)
451 cd00300 LDH_like L-lactate deh 95.1 0.046 1E-06 55.0 6.3 69 384-454 1-79 (300)
452 PRK14620 NAD(P)H-dependent gly 95.0 0.046 9.9E-07 55.4 6.3 41 383-423 2-42 (326)
453 cd05293 LDH_1 A subgroup of L- 95.0 0.061 1.3E-06 54.5 7.1 71 382-454 4-84 (312)
454 cd08237 ribitol-5-phosphate_DH 95.0 0.08 1.7E-06 53.9 8.0 67 380-450 163-231 (341)
455 TIGR03128 RuMP_HxlA 3-hexulose 95.0 0.56 1.2E-05 44.1 13.3 130 25-172 1-132 (206)
456 PRK07455 keto-hydroxyglutarate 95.0 0.16 3.4E-06 47.6 9.2 118 26-172 14-131 (187)
457 TIGR01500 sepiapter_red sepiap 95.0 0.054 1.2E-06 52.5 6.4 43 383-425 2-49 (256)
458 PLN02712 arogenate dehydrogena 95.0 0.07 1.5E-06 59.6 7.9 71 377-452 365-436 (667)
459 PRK01710 murD UDP-N-acetylmura 95.0 0.058 1.3E-06 57.4 7.1 72 379-452 12-88 (458)
460 cd03174 DRE_TIM_metallolyase D 94.9 3.9 8.4E-05 39.7 19.4 200 34-247 17-245 (265)
461 cd00959 DeoC 2-deoxyribose-5-p 94.9 1.8 3.8E-05 40.9 16.2 145 32-190 13-172 (203)
462 PLN02657 3,8-divinyl protochlo 94.9 0.053 1.2E-06 56.6 6.4 40 378-417 57-97 (390)
463 PRK15181 Vi polysaccharide bio 94.8 0.044 9.6E-07 56.0 5.6 74 379-453 13-102 (348)
464 PF00899 ThiF: ThiF family; I 94.8 0.036 7.8E-07 48.7 4.3 33 381-413 2-35 (135)
465 PRK10637 cysG siroheme synthas 94.8 0.06 1.3E-06 57.4 6.7 41 374-414 5-45 (457)
466 cd08293 PTGR2 Prostaglandin re 94.8 0.1 2.2E-06 52.8 8.1 70 381-450 155-233 (345)
467 TIGR02822 adh_fam_2 zinc-bindi 94.8 0.13 2.7E-06 52.2 8.7 69 380-452 165-234 (329)
468 TIGR01472 gmd GDP-mannose 4,6- 94.7 0.041 9E-07 55.9 5.1 33 382-414 1-34 (343)
469 PRK14806 bifunctional cyclohex 94.7 0.069 1.5E-06 60.3 7.3 68 382-451 4-73 (735)
470 cd00650 LDH_MDH_like NAD-depen 94.7 0.066 1.4E-06 52.7 6.3 71 384-455 1-84 (263)
471 TIGR02355 moeB molybdopterin s 94.7 0.041 8.9E-07 53.6 4.8 36 379-414 22-58 (240)
472 TIGR01777 yfcH conserved hypot 94.7 0.026 5.6E-07 55.4 3.4 68 384-453 1-69 (292)
473 COG1712 Predicted dinucleotide 94.7 0.075 1.6E-06 50.8 6.2 45 383-427 2-49 (255)
474 PRK05808 3-hydroxybutyryl-CoA 94.7 0.058 1.3E-06 53.6 5.9 38 382-419 4-41 (282)
475 PRK11790 D-3-phosphoglycerate 94.7 0.046 1E-06 57.5 5.3 38 377-414 147-184 (409)
476 PLN02178 cinnamyl-alcohol dehy 94.7 0.099 2.1E-06 54.2 7.7 71 380-451 178-252 (375)
477 PRK12921 2-dehydropantoate 2-r 94.6 0.063 1.4E-06 53.6 6.1 39 383-422 2-40 (305)
478 PLN02427 UDP-apiose/xylose syn 94.6 0.058 1.3E-06 55.9 6.0 75 377-452 10-97 (386)
479 PRK08507 prephenate dehydrogen 94.6 0.074 1.6E-06 52.6 6.5 66 383-452 2-69 (275)
480 PF02558 ApbA: Ketopantoate re 94.6 0.073 1.6E-06 47.3 5.8 38 384-422 1-38 (151)
481 PTZ00117 malate dehydrogenase; 94.6 0.094 2E-06 53.2 7.2 73 380-454 4-86 (319)
482 COG0686 Ald Alanine dehydrogen 94.6 0.05 1.1E-06 54.3 4.9 71 380-451 167-241 (371)
483 cd08281 liver_ADH_like1 Zinc-d 94.6 0.1 2.3E-06 53.6 7.6 71 380-451 191-269 (371)
484 cd08242 MDR_like Medium chain 94.5 0.15 3.2E-06 50.9 8.6 69 380-451 155-224 (319)
485 PLN02712 arogenate dehydrogena 94.5 0.097 2.1E-06 58.4 7.7 69 380-452 51-119 (667)
486 PLN02240 UDP-glucose 4-epimera 94.5 0.069 1.5E-06 54.2 6.1 35 379-413 3-38 (352)
487 TIGR03026 NDP-sugDHase nucleot 94.5 0.05 1.1E-06 57.1 5.1 40 383-422 2-41 (411)
488 PRK14041 oxaloacetate decarbox 94.5 5.6 0.00012 42.6 20.5 228 13-246 4-250 (467)
489 KOG1502 Flavonol reductase/cin 94.5 0.076 1.7E-06 53.7 6.1 73 380-453 5-90 (327)
490 PRK08309 short chain dehydroge 94.4 0.11 2.5E-06 48.1 6.8 42 383-424 2-43 (177)
491 PLN02514 cinnamyl-alcohol dehy 94.4 0.15 3.2E-06 52.3 8.3 71 380-451 180-254 (357)
492 cd05188 MDR Medium chain reduc 94.4 0.14 3E-06 49.2 7.6 71 380-451 134-211 (271)
493 cd08239 THR_DH_like L-threonin 94.3 0.13 2.8E-06 52.0 7.6 71 380-451 163-241 (339)
494 PRK09282 pyruvate carboxylase 94.3 4.4 9.6E-05 44.7 19.9 228 13-246 5-251 (592)
495 TIGR01202 bchC 2-desacetyl-2-h 94.3 0.12 2.6E-06 51.8 7.3 66 380-451 144-210 (308)
496 PLN02545 3-hydroxybutyryl-CoA 94.3 0.1 2.3E-06 52.1 6.8 38 382-419 5-42 (295)
497 TIGR02279 PaaC-3OHAcCoADH 3-hy 94.3 0.095 2.1E-06 56.6 6.7 40 381-420 5-44 (503)
498 TIGR03466 HpnA hopanoid-associ 94.2 0.024 5.2E-07 56.6 2.0 67 383-451 2-74 (328)
499 PRK11199 tyrA bifunctional cho 94.2 0.056 1.2E-06 56.2 4.7 34 381-414 98-132 (374)
500 PLN02740 Alcohol dehydrogenase 94.2 0.13 2.8E-06 53.2 7.4 71 380-451 198-278 (381)
No 1
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=100.00 E-value=1.1e-102 Score=833.57 Aligned_cols=454 Identities=82% Similarity=1.257 Sum_probs=406.5
Q ss_pred cccccccccCCCCCCcEEEEeeccCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCCchhHHHHHHhhCCCcEEEEeccCC
Q 012352 9 ASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIW 88 (465)
Q Consensus 9 ~~~~~~~~~~~~~~~~~icv~l~~~t~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~ 88 (465)
||.---|||+++.++|+|||||++++.+|++.+++++...++|+||||+|+|++..+.+++..+++..++|+|||+|+++
T Consensus 8 ~~~~~~~~~~~~~~~~~icv~i~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~~~~~~~~~~~plI~T~R~~~ 87 (529)
T PLN02520 8 ASDDLQGSGGVRRNPTLICVPIMADSVDKMLIEMAKAKELGADLVEIRLDFLKNFNPREDLKTLIKQSPLPTLVTYRPKW 87 (529)
T ss_pred hhhhhhcccccccCCCEEEEEeCCCCHHHHHHHHHHhhhcCCCEEEEEeccccccCCHHHHHHHHhcCCCcEEEEeccHH
Confidence 44555689999999999999999999999999999887789999999999999876666777777777899999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhCCcEEEEeeccccchhHHHHhcCCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHcCCC
Q 012352 89 EGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGAD 168 (465)
Q Consensus 89 eGG~~~~~~~~~~~~l~~~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~~iI~S~H~f~~tps~~el~~~~~~~~~~gad 168 (465)
|||.++.++++|+++|+.+++.++||||||++..++..+.+...+..++++|+|||||++||+.+|+.+++++|+++|||
T Consensus 88 eGG~~~~~~~~~~~ll~~~~~~~~d~iDiEl~~~~~~~~~~~~~~~~~~~vI~S~H~f~~tP~~~el~~~~~~~~~~gaD 167 (529)
T PLN02520 88 EGGQYEGDENKRQDALRLAMELGADYVDVELKVAHEFINSISGKKPEKCKVIVSSHNYENTPSVEELGNLVARIQATGAD 167 (529)
T ss_pred HCCCCCCCHHHHHHHHHHHHHhCCCEEEEEcCCchhHHHHHHhhhhcCCEEEEEecCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999888776666666668999999999999999999999999999999999
Q ss_pred EEEEEeecCCHHHHHHHHHHhccCCCCEEEEecCccchhhhhhccccCCccccccccCccCCCCCCCChhhHHhhhcccc
Q 012352 169 IVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQ 248 (465)
Q Consensus 169 ivKia~~~~~~~D~~~ll~~~~~~~~p~i~~~MG~~G~~sRi~~~~~Gs~~tf~~~~~~~~sApGQ~~~~~l~~~~~~~~ 248 (465)
|+|||+||++.+|++++++++.+.+.|+|+||||+.|++||+++++|||++||++++++.++||||++++++++++++.+
T Consensus 168 i~Kia~~~~~~~D~~~ll~~~~~~~~p~i~~~MG~~G~~sRi~~~~~GS~lTy~~~~~~~~sAPGQ~~~~~l~~~~~~~~ 247 (529)
T PLN02520 168 IVKIATTALDITDVARMFQITVHSQVPTIGLVMGERGLISRILCPKFGGYLTFGTLEAGKVSAPGQPTIKDLLDLYNFRQ 247 (529)
T ss_pred EEEEecCCCCHHHHHHHHHHHhhcCCCEEEEecCCCCchheecccccCCceeeeecCcccccCCCCCCHHHHHHHhhhhc
Confidence 99999999999999999998777789999999999999999999999999999999865579999999999999999999
Q ss_pred cCCCcceeeecCCCccccccHHHHHHHHHHcCCCeeEeccccccHHHHHHHhhcCCCCeeEeccCchHHHhhhccccCHH
Q 012352 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTV 328 (465)
Q Consensus 249 ~~~~~~~~~~iG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~~l~~~~~~l~~~~~~G~~vT~P~K~~v~~~~d~~~~~ 328 (465)
+.++|++|+|+|+||+||+||.|||++|+++|+|+.|.++++++++++++.++.++|.|+|||||||+++++++|++++.
T Consensus 248 ~~~~t~~~~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~l~~~~~~l~~~~~~G~nVTiP~K~~v~~~lD~~~~~ 327 (529)
T PLN02520 248 IGPDTKVYGIIGKPVGHSKSPILHNEAFKSVGFNGVYVHLLVDDLAKFLQTYSSPDFAGFSCTIPHKEDALKCCDEVDPI 327 (529)
T ss_pred ccCCceEEEEEcCCcccccCHHHHHHHHHHCCCCcEEEEeehhhHHHHHHHHhhCCCCEEEECcCCHHHHHHHhccCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccceeeEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEE
Q 012352 329 AKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV 408 (465)
Q Consensus 329 A~~~gavNtv~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~ 408 (465)
|+.+||||||+++..+|+|+||||||.||+++|++.+... +..+..+.++++|+|+|+|+||+|++++++|++.|++|+
T Consensus 328 A~~iGAVNTvv~~~~~g~l~G~NTD~~G~~~~l~~~~~~~-~~~~~~~~~~~~k~vlIlGaGGagrAia~~L~~~G~~V~ 406 (529)
T PLN02520 328 AKSIGAINTIIRRPSDGKLVGYNTDYIGAISAIEDGLRAS-GSSPASGSPLAGKLFVVIGAGGAGKALAYGAKEKGARVV 406 (529)
T ss_pred HHHhCCceEEEEeCCCCEEEEEcccHHHHHHHHHhhhccc-ccccccccCCCCCEEEEECCcHHHHHHHHHHHHCCCEEE
Confidence 9999999999986227899999999999999998643110 000001245778999999999999999999999999999
Q ss_pred EEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCCCCCCCCCCCCCC
Q 012352 409 IANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIP 463 (465)
Q Consensus 409 i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~gm~~~~~~~p~~ 463 (465)
++||+.+++++++++++...+.++++.+.....+|+||||||+||.+..+.+|++
T Consensus 407 i~nR~~e~a~~la~~l~~~~~~~~~~~~~~~~~~diiINtT~vGm~~~~~~~pl~ 461 (529)
T PLN02520 407 IANRTYERAKELADAVGGQALTLADLENFHPEEGMILANTTSVGMQPNVDETPIS 461 (529)
T ss_pred EEcCCHHHHHHHHHHhCCceeeHhHhhhhccccCeEEEecccCCCCCCCCCCccc
Confidence 9999999999999988654455555432122357999999999999877777765
No 2
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=100.00 E-value=5.2e-90 Score=728.15 Aligned_cols=401 Identities=29% Similarity=0.438 Sum_probs=360.2
Q ss_pred EEEEeeccCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCCchhHHHHHHhhCCCcEEEEeccCCCCCCCCCCHHHHHHHH
Q 012352 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVL 104 (465)
Q Consensus 25 ~icv~l~~~t~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~~l 104 (465)
||||||++++.+|++++++.+. .++|+||||+|+|++.++.+ ++.+++..+.|++ |+|+++ ++++++|++++
T Consensus 1 ~icv~i~~~~~~e~~~~~~~~~-~~~D~vE~R~D~~~~~~~~~-~~~l~~~~~~pil-T~R~~~-----~~~~~~~~~~l 72 (477)
T PRK09310 1 MLCATISGPSFLEAKQQILRSL-KLVDCIELRVDLLLSLSDLE-LKKLIELAPIPIL-TWKKHE-----SCSQAAWIDKM 72 (477)
T ss_pred CEEEEecCCCHHHHHHHHHHhc-ccCCEEEEEehhhccCCHHH-HHHHHhcCCCceE-EeccCc-----cCCHHHHHHHH
Confidence 6999999999999999999876 67999999999998776543 7777664456766 999987 45889999999
Q ss_pred HHHHHhCCcEEEEeeccccchhHHHHhcCCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCCHHHHHH
Q 012352 105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVAR 184 (465)
Q Consensus 105 ~~~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~~iI~S~H~f~~tps~~el~~~~~~~~~~gadivKia~~~~~~~D~~~ 184 (465)
+.+++.++||||||++.+++..+++... +++++||+|||||+ .+++.+++++|+++||||+|||+||++.+|+++
T Consensus 73 ~~~~~~~~d~vDiEl~~~~~~~~~l~~~-~~~~kvI~S~Hdf~----~~~l~~~~~~~~~~gaDi~Kia~~a~~~~D~l~ 147 (477)
T PRK09310 73 QSLAKLNPNYLDIDKDFPKEALIRIRKL-HPKIKIILSYHTSE----HEDIIQLYNEMLASAADYYKIAVSSSSSTDLLN 147 (477)
T ss_pred HHHHHhCCCEEEEEecCCHHHHHHHHHh-CCCCEEEEEcCCCC----cchHHHHHHHHHHcCCCEEEEeeCCCCHHHHHH
Confidence 9999999999999999988877777543 35999999999994 258999999999999999999999999999999
Q ss_pred HHHHhccCCCCEEEEecCccchhhhhhccccCCccccccccCccCCCCCCCChhhHHhhhcccccCCCcceeeecCCCcc
Q 012352 185 VFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVG 264 (465)
Q Consensus 185 ll~~~~~~~~p~i~~~MG~~G~~sRi~~~~~Gs~~tf~~~~~~~~sApGQ~~~~~l~~~~~~~~~~~~~~~~~~iG~pi~ 264 (465)
+++++...+.|+|+||||+.|++||++++.|||++||+++..+.++||||++++++. .|++.+++.+|++|||+|+||+
T Consensus 148 ll~~~~~~~~p~i~i~MG~~G~~SRil~~~~gS~~Tfa~~~~~~~~APGQi~~~~l~-~~~~~~~~~~t~~~~liG~pi~ 226 (477)
T PRK09310 148 IIHQKRSLPENTTVLCMGGMGRPSRILSPLLQNAFNYAAGIGAPPVAPGQLSLEHLL-FYNYANLSAQSPIYGLIGDPVD 226 (477)
T ss_pred HHHHHhhCCCCEEEEEeCCCchHHhhcchhhcCccccccccCccccCCCCcCHHHHH-hcchhccCCCceEEEEECCCcc
Confidence 999988878899999999999999999999999999999876445799999999998 6788999888999999999999
Q ss_pred ccccHHHHHHHHHHcCCCeeEeccccc--cHHHHHHHhhcCCCCeeEeccCchHHHhhhccccCHHHHhccceeeEEEec
Q 012352 265 HSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQ 342 (465)
Q Consensus 265 hS~SP~~hn~~f~~~gl~~~y~~~~~~--~l~~~~~~l~~~~~~G~~vT~P~K~~v~~~~d~~~~~A~~~gavNtv~~~~ 342 (465)
||+||.|||++|+++|+|+.|.+++++ ++.++++.++.++|.|+|||||||++|++++|++++.|+.+||||||+++
T Consensus 227 hS~SP~~hn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~~~~~A~~iGAVNTv~~~- 305 (477)
T PRK09310 227 RSISHLSHNPLFSQLSLNCPYIKLPLTPQELPKFFSTIRDLPFLGLSVTMPLKTAVLDFLDKLDPSVKLCGSCNTLVFR- 305 (477)
T ss_pred cccCHHHHHHHHHHcCCCcEEEEeecCHHHHHHHHHHHHhCCCCEEEECccCHHHHHHHhccCCHHHHHhCcceEEEee-
Confidence 999999999999999999999999884 79999999999999999999999999999999999999999999999987
Q ss_pred cCCeEEEEeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Q 012352 343 SDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE 422 (465)
Q Consensus 343 ~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~ 422 (465)
+|+|+||||||.||+.+|++. +.++.+++++|+|+||+|+++++.|.+.|++|++++|+.++++++++
T Consensus 306 -~g~l~G~NTD~~G~~~~l~~~-----------~~~~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~ 373 (477)
T PRK09310 306 -NGKIEGYNTDGEGLFSLLKQK-----------NIPLNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALAS 373 (477)
T ss_pred -CCEEEEEecCHHHHHHHHHhc-----------CCCcCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 899999999999999999753 24567899999999999999999999999999999999999999988
Q ss_pred HHCCcccchhcccccCCCCeeEEEecCCCCCC
Q 012352 423 TVGGHALSLADLENFNPEDGMILANTTSIGMQ 454 (465)
Q Consensus 423 ~~~~~~~~~~~l~~~~~~~~DilInaT~~gm~ 454 (465)
.++....+++++.+ +.++|+||||||.||.
T Consensus 374 ~~~~~~~~~~~~~~--l~~~DiVInatP~g~~ 403 (477)
T PRK09310 374 RCQGKAFPLESLPE--LHRIDIIINCLPPSVT 403 (477)
T ss_pred HhccceechhHhcc--cCCCCEEEEcCCCCCc
Confidence 87654445554433 4578999999999983
No 3
>PRK02412 aroD 3-dehydroquinate dehydratase; Provisional
Probab=100.00 E-value=3.2e-54 Score=420.81 Aligned_cols=235 Identities=29% Similarity=0.472 Sum_probs=210.8
Q ss_pred ccccccCCCCCCcEEEEeeccCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCCchhH----HHHHHhhC-CCcEEEEecc
Q 012352 12 SKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPREN----IKTLIKES-PVPTLFTYRP 86 (465)
Q Consensus 12 ~~~~~~~~~~~~~~icv~l~~~t~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~----l~~l~~~~-~~PiI~T~R~ 86 (465)
+|+.+-.++.++|+|||||.++|.+|++++++++...++|+||||+|+|++++..+. +..+++.. ++|+|||+|+
T Consensus 4 ~~~~~~~~~~~~~~i~v~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~~~~~~~~l~~~~~~~PiI~T~R~ 83 (253)
T PRK02412 4 VTVKNLVIGEGAPKIIVPIMGKTLEEVLAEALAISKYDADIIEWRADFLEKISDVESVLAAAPAIREKFAGKPLLFTFRT 83 (253)
T ss_pred eEEeceEeCCCCcEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEEechhhccCCHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence 367888899999999999999999999999998877899999999999987644332 33344433 6899999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhC-CcEEEEeeccccchhHHHHh-cCCCCcEEEEEeccCCCCCCHHHHHHHHHHHHH
Q 012352 87 IWEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVAREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQA 164 (465)
Q Consensus 87 ~~eGG~~~~~~~~~~~~l~~~~~~~-~~~iDiEl~~~~~~~~~l~~-~~~~~~~iI~S~H~f~~tps~~el~~~~~~~~~ 164 (465)
++|||.++.++++|+++++.+++.+ |||||||++.+.+..+++.. .+..++++|+|||+|+.||+.+++.+++++|++
T Consensus 84 ~~eGG~~~~~~~~~~~ll~~~~~~~~~d~vDiEl~~~~~~~~~l~~~~~~~~~kvI~S~H~f~~tP~~~~l~~~~~~~~~ 163 (253)
T PRK02412 84 AKEGGEIALSDEEYLALIKAVIKSGLPDYIDVELFSGKDVVKEMVAFAHEHGVKVVLSYHDFEKTPPKEEIVERLRKMES 163 (253)
T ss_pred hhhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeccCChHHHHHHHHHHHHcCCEEEEeeCCCCCCcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999 99999999988777776653 456899999999999999999999999999999
Q ss_pred cCCCEEEEEeecCCHHHHHHHHHHhcc-----CCCCEEEEecCccchhhhhhccccCCccccccccCccCCCCCCCChhh
Q 012352 165 SGADIVKFATTALDITDVARVFQITVH-----SQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKD 239 (465)
Q Consensus 165 ~gadivKia~~~~~~~D~~~ll~~~~~-----~~~p~i~~~MG~~G~~sRi~~~~~Gs~~tf~~~~~~~~sApGQ~~~~~ 239 (465)
+||||+|+|+||++.+|++++++++.+ .+.|+|+|+||+.|++||+++++|||++||++++++ +||||+++++
T Consensus 164 ~gaDivKia~~a~~~~D~~~ll~~~~~~~~~~~~~P~i~~~MG~~G~~SRil~~~~GS~~ty~~~~~~--sAPGQ~~~~e 241 (253)
T PRK02412 164 LGADIVKIAVMPQSEQDVLTLLNATREMKELYADQPLITMSMGKLGRISRLAGEVFGSSWTFASLDKA--SAPGQISVED 241 (253)
T ss_pred hCCCEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCchHHHcchhhhCCcceecCCCCC--CCCCCCCHHH
Confidence 999999999999999999999998643 368999999999999999999999999999999975 9999999999
Q ss_pred HHhhhcccc
Q 012352 240 LLDLYNFRQ 248 (465)
Q Consensus 240 l~~~~~~~~ 248 (465)
|++++++..
T Consensus 242 l~~i~~~l~ 250 (253)
T PRK02412 242 LRRILEILH 250 (253)
T ss_pred HHHHHHHhc
Confidence 999998754
No 4
>COG0710 AroD 3-dehydroquinate dehydratase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-52 Score=395.69 Aligned_cols=222 Identities=32% Similarity=0.536 Sum_probs=197.9
Q ss_pred CcEEEEeeccCCHHHHHHHHHhhhhcCCCEEEEEecCCCCC-CchhHHHHHHhh-CCCcEEEEeccCCCCCCCCCCHHHH
Q 012352 23 PTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNF-NPRENIKTLIKE-SPVPTLFTYRPIWEGGQYDGDENER 100 (465)
Q Consensus 23 ~~~icv~l~~~t~~e~~~~~~~~~~~~~D~vElRlD~l~~~-~~~~~l~~l~~~-~~~PiI~T~R~~~eGG~~~~~~~~~ 100 (465)
.|+||+|+.+.+.+++.+++++.+..++|++|||+|+|+.- +..+....+++. ...|+|||+|+.+|||.|+.++++|
T Consensus 1 ~~~i~~~v~~~~~~~~~e~~~~~~~~~~Di~E~RvD~l~~~~~~~~~~~~~~e~~~~~~~IfT~R~~~EGG~~~~~~~~~ 80 (231)
T COG0710 1 MPKIIVPVVGLDIAELKEQAEKSKELDADIVELRVDLLESNVEVLEVAKALREKDPDKPLIFTFRTVKEGGEFPGSEEEY 80 (231)
T ss_pred CCEEEEEeecCCHHHHHHHHHHhhccCCCEEEEeechhcccchHHHHHHHHHHhccCCceEEEEeehhhcCCCCCCHHHH
Confidence 48999999999999999999999889999999999999921 122344445544 3679999999999999999999999
Q ss_pred HHHHHHHHHhC-CcEEEEeeccccchhHHHHhcCCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCCH
Q 012352 101 VDVLRLAMELG-ADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDI 179 (465)
Q Consensus 101 ~~~l~~~~~~~-~~~iDiEl~~~~~~~~~l~~~~~~~~~iI~S~H~f~~tps~~el~~~~~~~~~~gadivKia~~~~~~ 179 (465)
+++++.+++.+ ++|||||+....+..+++.... ...++|+|||||++||+++++.+++.+|.++||||+|+|+||++.
T Consensus 81 i~ll~~la~~~~~d~iDiEl~~~~~~~~~~~~~~-~~~~vI~SyH~F~~TP~~~~i~~~l~km~~~~aDivKiAvm~~~~ 159 (231)
T COG0710 81 IELLKKLAELNGPDYIDIELSSPEDDVKEIIKFA-KKHGVIVSYHDFEKTPPLEEIIERLDKMESLGADIVKIAVMPQSK 159 (231)
T ss_pred HHHHHHHHhhcCCCEEEEEccCcchhHHHHHhcc-ccCCEEEEeccCCCCCcHHHHHHHHHHHHhhCCCeEEEEecCCCH
Confidence 99999999976 9999999999987766666432 333399999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcc---CCCCEEEEecCccchhhhhhccccCCccccccccCccCCCCCCCChhhHHhhhccc
Q 012352 180 TDVARVFQITVH---SQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFR 247 (465)
Q Consensus 180 ~D~~~ll~~~~~---~~~p~i~~~MG~~G~~sRi~~~~~Gs~~tf~~~~~~~~sApGQ~~~~~l~~~~~~~ 247 (465)
+|++++++++.. .+.|+|+||||+.|++||+++++|||++||++++++ +||||++++++++++..+
T Consensus 160 ~DvL~ll~~~~~~~~~~~p~i~i~MG~~G~~SRv~~~~~GS~~tya~~~~~--sAPGQi~v~~l~~~~~~l 228 (231)
T COG0710 160 EDVLDLLEATREFKEAEKPVITISMGKTGKISRVAGPVFGSPITYASLDKP--SAPGQISVDELRKILTLL 228 (231)
T ss_pred HHHHHHHHHHHhccccCCCEEEEecCCCCchhhhhHhhhCCceeEeecCCC--CCCCCCCHHHHHHHHHHh
Confidence 999999999875 689999999999999999999999999999999975 999999999999988764
No 5
>TIGR01093 aroD 3-dehydroquinate dehydratase, type I. Type II 3-dehydroquinate dehydratase, designated AroQ, is described by TIGR01088.
Probab=100.00 E-value=9.3e-52 Score=398.24 Aligned_cols=217 Identities=38% Similarity=0.615 Sum_probs=191.8
Q ss_pred EEEEeeccCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCCchhHHHHHHhh-----CCCcEEEEeccCCCCCCCCCCHHH
Q 012352 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-----SPVPTLFTYRPIWEGGQYDGDENE 99 (465)
Q Consensus 25 ~icv~l~~~t~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~-----~~~PiI~T~R~~~eGG~~~~~~~~ 99 (465)
+||||+++++.+++..+++++ ..++|+||||+|+|.+..+.+.+..+.+. .++|+|||+|+++|||.++.++++
T Consensus 1 ~i~v~~~~~~~~~~~~~~~~~-~~~aD~vElRlD~l~~~~~~~~~~~~~~~~~~~~~~~piI~T~R~~~eGG~~~~~~~~ 79 (228)
T TIGR01093 1 KIFVPLTAPDLEEALATAEKI-CKGADIVELRVDLLKDPSSNNDVDALIEQLSQLRPDKPLIFTIRTISEGGKFPGNEEE 79 (228)
T ss_pred CEEEEccCCCHHHHHHHHHHh-ccCCCEEEEEechhcccCcHHHHHHHHHHHHHhcCCCcEEEEECChhhCCCCCCCHHH
Confidence 599999999999999999987 77999999999999865443222222211 478999999999999999999999
Q ss_pred HHHHHHHH-HHhCCcEEEEeeccccchhHHHHh-cCCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEeecC
Q 012352 100 RVDVLRLA-MELGADYIDVELQVAREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTAL 177 (465)
Q Consensus 100 ~~~~l~~~-~~~~~~~iDiEl~~~~~~~~~l~~-~~~~~~~iI~S~H~f~~tps~~el~~~~~~~~~~gadivKia~~~~ 177 (465)
|+++++.+ .+.++||||||++.+.+..+++.. .+.++++||+|||+|++||+.+++.+++++|+++||||+|+|+||+
T Consensus 80 ~~~ll~~~~~~~~~d~vDiEl~~~~~~~~~l~~~~~~~~~kvI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~a~ 159 (228)
T TIGR01093 80 YLEELKRAADSPGPDFVDIELFLPDDAVKELINIAKKGGTKIIMSYHDFQKTPSWEEIVERLEKALSYGADIVKIAVMAN 159 (228)
T ss_pred HHHHHHHHHHhCCCCEEEEEccCCHHHHHHHHHHHHHCCCEEEEeccCCCCCCCHHHHHHHHHHHHHhCCCEEEEEeccC
Confidence 99999988 566799999999998877776653 4568999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhccC----CCCEEEEecCccchhhhhhccccCCccccccccCccCCCCCCCChhhHHhhh
Q 012352 178 DITDVARVFQITVHS----QVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLY 244 (465)
Q Consensus 178 ~~~D~~~ll~~~~~~----~~p~i~~~MG~~G~~sRi~~~~~Gs~~tf~~~~~~~~sApGQ~~~~~l~~~~ 244 (465)
+.+|+++|+.++.+. ++|+|+|+||+.|++||+++++|||++||++++++ +||||+++++|++++
T Consensus 160 ~~~D~~~ll~~~~~~~~~~~~p~i~~~MG~~G~~SRil~~~~gs~~t~~~~~~~--sApGQ~~~~~l~~~~ 228 (228)
T TIGR01093 160 SKEDVLTLLEITNKVDEHADVPLITMSMGDRGKISRVLGAVFGSVLTFGSLGKA--SAPGQISVDDLRELL 228 (228)
T ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCChhHhhccccccccceeccCCCC--CCCCCcCHHHHHhhC
Confidence 999999999987543 57999999999999999999999999999999864 999999999999864
No 6
>PF01487 DHquinase_I: Type I 3-dehydroquinase; InterPro: IPR001381 3-dehydroquinate dehydratase (4.2.1.10 from EC), or dehydroquinase, catalyzes the conversion of 3-dehydroquinate into 3-dehydroshikimate. It is the third step in the shikimate pathway for the biosynthesis of aromatic amino acids from chorismate. Two classes of dehydroquinases exist, known as types I and II. The best studied type I enzyme is from Escherichia coli (gene aroD) and related bacteria where it is a homodimeric protein. In fungi, dehydroquinase is part of a multifunctional enzyme which catalyzes five consecutive steps in the shikimate pathway. A histidine [] is involved in the catalytic mechanism.; GO: 0003855 3-dehydroquinate dehydratase activity; PDB: 2O7Q_A 2GPT_A 2O7S_A 1SFL_A 2OCZ_A 2OX1_C 1GQN_A 1QFE_B 1L9W_D 3L9C_A ....
Probab=100.00 E-value=1.2e-51 Score=396.51 Aligned_cols=217 Identities=39% Similarity=0.645 Sum_probs=183.9
Q ss_pred EEeeccCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCCc---hhHHHHHHhhCCCcEEEEeccCCCCCCCCCCHHHHHHH
Q 012352 27 CVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNP---RENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDV 103 (465)
Q Consensus 27 cv~l~~~t~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~---~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~~ 103 (465)
||||+++|.++++++++++...++|+||||+|+|.+.+. .+.++.+++..++|+|||+|+++|||.+..++++|+++
T Consensus 1 cv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~~~~l~~lr~~~~~piI~T~R~~~eGG~~~~~~~~~~~l 80 (224)
T PF01487_consen 1 CVPLTGSTLEELLAELEEAESSGADAVELRLDYLENDSAEDISEQLAELRRSLDLPIIFTVRTKEEGGRFQGSEEEYLEL 80 (224)
T ss_dssp EEEE--SSHHHHHHHHHHHHHTTTSEEEEEGGGSTTTSHHHHHHHHHHHHHHCTSEEEEE--BGGGTSSBSS-HHHHHHH
T ss_pred CEeeCCCCHHHHHHHHHHHHhcCCCEEEEEeccccccChHHHHHHHHHHHHhCCCCEEEEecccccCCCCcCCHHHHHHH
Confidence 999999999999999999877699999999999996322 34677777778999999999999999999999999999
Q ss_pred HHHHHHhCCcEEEEeeccccchhHHHHhcCCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCCHHHHH
Q 012352 104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVA 183 (465)
Q Consensus 104 l~~~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~~iI~S~H~f~~tps~~el~~~~~~~~~~gadivKia~~~~~~~D~~ 183 (465)
++.+++.|++|||||++..++........+.++++||+|||+|+.||+++++.+++++|.++||||+|+|+|+++.+|++
T Consensus 81 l~~~~~~~~d~iDiE~~~~~~~~~~~~~~~~~~~~iI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia~~~~~~~D~~ 160 (224)
T PF01487_consen 81 LERAIRLGPDYIDIELDLFPDDLKSRLAARKGGTKIILSYHDFEKTPSWEELIELLEEMQELGADIVKIAVMANSPEDVL 160 (224)
T ss_dssp HHHHHHHTSSEEEEEGGCCHHHHHHHHHHHHTTSEEEEEEEESS---THHHHHHHHHHHHHTT-SEEEEEEE-SSHHHHH
T ss_pred HHHHHHcCCCEEEEEcccchhHHHHHHHHhhCCCeEEEEeccCCCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCHHHHH
Confidence 99999999999999999555443323333468999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccC----CCCEEEEecCccchhhhhhccccCCccccccccCccCCCCCCCChhhHHhhhc
Q 012352 184 RVFQITVHS----QVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN 245 (465)
Q Consensus 184 ~ll~~~~~~----~~p~i~~~MG~~G~~sRi~~~~~Gs~~tf~~~~~~~~sApGQ~~~~~l~~~~~ 245 (465)
++++++.+. +.|+|+|+||+.|++||+++++|||++||++.+++ +||||+++++|+++|+
T Consensus 161 ~l~~~~~~~~~~~~~p~i~~~MG~~G~~SRi~~~~~Gs~~t~~~~~~~--sApGQl~~~~l~~~~~ 224 (224)
T PF01487_consen 161 RLLRFTKEFREEPDIPVIAISMGELGRISRILNPIFGSVLTFASAGEA--SAPGQLTLEELREILH 224 (224)
T ss_dssp HHHHHHHHHHHHTSSEEEEEEETGGGHHHHHCHHHHTBSEEEEBSSS---SSTT-EBHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCcEEEEEcCCCchhHHHHHhhhcCCcccCCCCCC--CCCCCCcHHHHHHHhC
Confidence 999987653 68999999999999999999999999999977754 9999999999999875
No 7
>PRK13575 3-dehydroquinate dehydratase; Provisional
Probab=100.00 E-value=4.7e-50 Score=386.85 Aligned_cols=220 Identities=24% Similarity=0.403 Sum_probs=183.8
Q ss_pred CcEEEEeeccCC-HHHH-HHHHHhhhhcCCCEEEEEecCCCCCCchhHHHHHHh-----hCCCcEEEEeccCCCCCCCCC
Q 012352 23 PTLICVPIMGES-VDKM-VVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIK-----ESPVPTLFTYRPIWEGGQYDG 95 (465)
Q Consensus 23 ~~~icv~l~~~t-~~e~-~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~-----~~~~PiI~T~R~~~eGG~~~~ 95 (465)
.+.|++++.... +++. .++++.. ..++|+||||+|+|++.+.. .+..+++ ..+.|+|||+|+++|||.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vElRlD~l~~~~~~-~~~~~i~~l~~~~~~~p~I~T~Rt~~EGG~~~~ 80 (238)
T PRK13575 3 HVEVAATIAPQLSIEETLIQKINHR-IDAIDIIELRIDQWENVTVD-QLAEMITKLKVLQDSFKLLVTYRTKLQGGYGQF 80 (238)
T ss_pred ceeEeeeeccccccchhHHHHHHhc-CCCCCEEEEEeccccCCCHH-HHHHHHHHHHhhcCCCCEEEEeCChhhCCCCCC
Confidence 456677776664 5665 4444443 46799999999999875432 3443332 146899999999999999999
Q ss_pred CHHHHHHHHHHHHHhC-CcEEEEeecc--ccchhHHHH-hcCCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEE
Q 012352 96 DENERVDVLRLAMELG-ADYIDVELQV--AREFNDSIR-GKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVK 171 (465)
Q Consensus 96 ~~~~~~~~l~~~~~~~-~~~iDiEl~~--~~~~~~~l~-~~~~~~~~iI~S~H~f~~tps~~el~~~~~~~~~~gadivK 171 (465)
++++|.++++.++..+ +||||||++. ..+..+++. ..+..+++||+|||||++||+.+++.+++++|+++||||+|
T Consensus 81 ~~~~~~~ll~~~~~~~~~d~vDiE~~~~~~~~~~~~l~~~~~~~~~~vI~S~H~F~~TP~~~~l~~~~~~m~~~gaDi~K 160 (238)
T PRK13575 81 TNDLYLNLLSDLANINGIDMIDIEWQADIDIEKHQRLITHLQQYNKEVVISHHNFESTPPLDELKFIFFKMQKFNPEYVK 160 (238)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEEcccCCChHHHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHHHHHHHhCCCEEE
Confidence 9999999998888765 8999999986 333344443 34567899999999999999999999999999999999999
Q ss_pred EEeecCCHHHHHHHHHHhcc----CCCCEEEEecCccchhhhhhccccCCccccccccCccCCCCCCCChhhHHhhhcc
Q 012352 172 FATTALDITDVARVFQITVH----SQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF 246 (465)
Q Consensus 172 ia~~~~~~~D~~~ll~~~~~----~~~p~i~~~MG~~G~~sRi~~~~~Gs~~tf~~~~~~~~sApGQ~~~~~l~~~~~~ 246 (465)
||+||++.+|+++|++++.+ .+.|+|+||||+.|++||+++++|||++||++++++ +||||+++++|++++++
T Consensus 161 iAv~~~~~~Dvl~Ll~~~~~~~~~~~~p~i~i~MG~~G~iSRi~~~~~GS~~Tya~l~~~--sAPGQi~v~~l~~i~~~ 237 (238)
T PRK13575 161 LAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALSYGCIGEP--QAPGQIHVTDLKAQVTL 237 (238)
T ss_pred EEecCCCHHHHHHHHHHHHHHHhccCCCEEEEeCCCCCchhhcchhhhCCceEecCCCCC--CCCCCCCHHHHHHHHHh
Confidence 99999999999999998654 367999999999999999999999999999999975 99999999999998864
No 8
>cd00502 DHQase_I Type I 3-dehydroquinase, (3-dehydroquinate dehydratase or DHQase.) Catalyzes the cis-dehydration of 3-dehydroquinate via a covalent imine intermediate to produce dehydroshikimate. Dehydroquinase is the third enzyme in the shikimate pathway, which is involved in the biosynthesis of aromatic amino acids. Type I DHQase exists as a homodimer. Type II 3-dehydroquinase also catalyzes the same overall reaction, but is unrelated in terms of sequence and structure, and utilizes a completely different reaction mechanism.
Probab=100.00 E-value=9.9e-50 Score=383.55 Aligned_cols=216 Identities=37% Similarity=0.607 Sum_probs=191.6
Q ss_pred EEEEeeccC-CHHHHHHHHHhhhhcCCCEEEEEecCCCCCC---chhHHHHHHhhCCCcEEEEeccCCCCCCCCCCHHHH
Q 012352 25 LICVPIMGE-SVDKMVVDMGKANASGADLVEIRLDGLKNFN---PRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENER 100 (465)
Q Consensus 25 ~icv~l~~~-t~~e~~~~~~~~~~~~~D~vElRlD~l~~~~---~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~ 100 (465)
+||+||.++ +.++..++++... ++|+||||+|+|.+.. ..++++.+++..+.|+|||+|+++|||.+..++++|
T Consensus 1 ~i~~~i~~~~~~~e~~~~~~~~~--~aD~vElR~D~~~~~~~~~~~~~~~~lr~~~~~piI~T~R~~~eGG~~~~~~~~~ 78 (225)
T cd00502 1 KICVPLTGPDLLEEALSLLELLL--GADAVELRVDLLEDPSIDDVAEQLSLLRELTPLPIIFTVRTKSEGGNFEGSEEEY 78 (225)
T ss_pred CEEEEecCCCCHHHHHHHHHHhc--CCCEEEEEEeeccccchHHHHHHHHHHHHhCCCCEEEEEcccccCCCcCCCHHHH
Confidence 589999999 9999998777643 8999999999998642 234566777666799999999999999999999999
Q ss_pred HHHHHHHHHhCCcEEEEeeccccchhHHHHhcCCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCCHH
Q 012352 101 VDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDIT 180 (465)
Q Consensus 101 ~~~l~~~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~~iI~S~H~f~~tps~~el~~~~~~~~~~gadivKia~~~~~~~ 180 (465)
+++++.+++.+++|||||++. +...+.+...+.++++||+|||+|++||+.+++.+++++|.++||||+|+|+||++.+
T Consensus 79 ~~ll~~~~~~~~d~vDiEl~~-~~~~~~~~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKla~~~~~~~ 157 (225)
T cd00502 79 LELLEEALKLGPDYVDIELDS-ALLEELINSRKKGNTKIIGSYHDFSGTPSDEELVSRLEKMAALGADIVKIAVMANSIE 157 (225)
T ss_pred HHHHHHHHHHCCCEEEEEecc-hHHHHHHHHHHhCCCEEEEEeccCCCCcCHHHHHHHHHHHHHhCCCEEEEEecCCCHH
Confidence 999999999999999999987 3333323333468999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccC----CCCEEEEecCccchhhhhhccccCCccccccccCccCCCCCCCChhhHHhhhc
Q 012352 181 DVARVFQITVHS----QVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN 245 (465)
Q Consensus 181 D~~~ll~~~~~~----~~p~i~~~MG~~G~~sRi~~~~~Gs~~tf~~~~~~~~sApGQ~~~~~l~~~~~ 245 (465)
|++++++++... +.|+|+|+||+.|++||++++.|||++||++++++ +||||+++++|+++++
T Consensus 158 D~~~ll~~~~~~~~~~~~p~i~~~MG~~G~~SRil~~~~gs~~t~~~~~~~--sApGQ~~~~~l~~~~~ 224 (225)
T cd00502 158 DNLRLLKFTRQVKNLYDIPLIAINMGELGKLSRILSPVFGSPLTYASLPEP--SAPGQLSVEELKQALS 224 (225)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEcCCCCchhhccccccCCcccccCCCCC--CCCCCcCHHHHHHHHh
Confidence 999999987654 46999999999999999999999999999999874 9999999999998876
No 9
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-49 Score=387.57 Aligned_cols=203 Identities=40% Similarity=0.670 Sum_probs=177.6
Q ss_pred cCCCcceeeecCCCccccccHHHHHHHHHHcCCCeeEeccccc--cHHHHHHHhhcCCCCeeEeccCchHHHhhhccccC
Q 012352 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD 326 (465)
Q Consensus 249 ~~~~~~~~~~iG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~--~l~~~~~~l~~~~~~G~~vT~P~K~~v~~~~d~~~ 326 (465)
++..|++|++||+||+||+||.|||.+|+++|+|+.|.+++++ +++++++.++.+++.|+|||||||+++++++|+++
T Consensus 2 ~~~~t~~~~viG~Pi~HS~SP~~Hn~~~~~lGl~~~Y~a~~v~~~~l~~~v~~~~~~g~~G~NVTiP~Ke~~~~~lD~l~ 81 (283)
T COG0169 2 MNGKTKLFGVIGNPISHSLSPRMHNAAFRALGLDYVYLAFEVPPEDLPEAVSGIRALGFRGLNVTIPFKEAALPLLDELS 81 (283)
T ss_pred CCCCceEEEEEcCCcccCcCHHHHHHHHHHcCCCceEEEeecCHHHHHHHHHHHHhcCCCeeEECCccHHHHHHHHhcCC
Confidence 4567899999999999999999999999999999999999995 99999999999999999999999999999999999
Q ss_pred HHHHhccceeeEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-
Q 012352 327 TVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA- 405 (465)
Q Consensus 327 ~~A~~~gavNtv~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~- 405 (465)
+.|+.+||||||+++. +|+|+||||||.||.++|++... ..+..+++++|+||||++||++++|++.|+
T Consensus 82 ~~A~~iGAVNTl~~~~-~g~l~G~NTD~~G~~~~L~~~~~---------~~~~~~~~vlilGAGGAarAv~~aL~~~g~~ 151 (283)
T COG0169 82 PRARLIGAVNTLVRED-DGKLRGYNTDGIGFLRALKEFGL---------PVDVTGKRVLILGAGGAARAVAFALAEAGAK 151 (283)
T ss_pred HHHHHhCCceEEEEcc-CCEEEEEcCCHHHHHHHHHhcCC---------CcccCCCEEEEECCcHHHHHHHHHHHHcCCC
Confidence 9999999999999982 49999999999999999987421 145568999999999999999999999997
Q ss_pred eEEEEECCHHHHHHHHHHHCCcc-----cchhcccccCCCCeeEEEecCCCCCCCCCCCCCCC
Q 012352 406 RVVIANRTYDRARELAETVGGHA-----LSLADLENFNPEDGMILANTTSIGMQPKVDETPIP 463 (465)
Q Consensus 406 ~v~i~~R~~~~a~~la~~~~~~~-----~~~~~l~~~~~~~~DilInaT~~gm~~~~~~~p~~ 463 (465)
+|+|+|||.+++++|++.++... ..+.++.. ..++|+||||||+||.+..+.+|++
T Consensus 152 ~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~--~~~~dliINaTp~Gm~~~~~~~~~~ 212 (283)
T COG0169 152 RITVVNRTRERAEELADLFGELGAAVEAAALADLEG--LEEADLLINATPVGMAGPEGDSPVP 212 (283)
T ss_pred EEEEEeCCHHHHHHHHHHhhhccccccccccccccc--ccccCEEEECCCCCCCCCCCCCCCc
Confidence 89999999999999999987421 12222322 1158999999999999875444544
No 10
>PRK13576 3-dehydroquinate dehydratase; Provisional
Probab=100.00 E-value=3.4e-49 Score=374.13 Aligned_cols=204 Identities=23% Similarity=0.296 Sum_probs=175.2
Q ss_pred CCcEEEEeeccCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCCchhHHHHHHhhCCCcEEEEeccCCCCCCCCCCHHHHH
Q 012352 22 NPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERV 101 (465)
Q Consensus 22 ~~~~icv~l~~~t~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~ 101 (465)
++|+||+||++++.++++++.+. .++|+||||+|+|++.... +..+++....|+|||+|+++|||.+++++++|+
T Consensus 1 ~~p~i~vpi~~~~~e~i~~~~~~---~~aD~vE~RlD~l~~~~~~--~~~~l~~~~~plI~T~R~~~EGG~~~~~~~~r~ 75 (216)
T PRK13576 1 MRPLIVASLPIKKIEDLKLIGNF---LDADLIELRLDYLKDREVS--VIEFLDKYKDKLIVTLRDKAEGGINELDDELKI 75 (216)
T ss_pred CCCEEEEEeCCCCHHHHHHHHhc---CCCCEEEEEeccccccchh--HHHHHHhcCCCEEEEeCChHHCCCCcCCHHHHH
Confidence 47999999999999999998654 5899999999999876443 333444456799999999999999999999999
Q ss_pred HHHHHHHHhCCcEEEEeeccccchhHHHHhcCCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCCH-H
Q 012352 102 DVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDI-T 180 (465)
Q Consensus 102 ~~l~~~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~~iI~S~H~f~~tps~~el~~~~~~~~~~gadivKia~~~~~~-~ 180 (465)
++++.+++.+. ++|||+....+.. ..+.++|+|||||++||+.++|.+++++|++ ||||+|+|+||++. .
T Consensus 76 ~ll~~~~~~~~-~vDiE~~~a~~~~-------~~~~~vI~S~HdF~~TP~~~eL~~~l~~m~~-gaDI~KiA~mp~~~~~ 146 (216)
T PRK13576 76 SLLKELYDKQF-LYDVEASFLQKYN-------VPYDNKIVSIHYFDYLPTSEEVKEIVSKFYE-KAFSVKIAVLGLKGYK 146 (216)
T ss_pred HHHHHHHHhCC-eEEEEcchhhhcC-------CCCCeEEEEECCCCCCcCHHHHHHHHHHHHh-cCCEEEEEeCCCCchH
Confidence 99999999875 7799998543321 1246799999999999999999999999987 99999999999985 7
Q ss_pred HHH-HHHHHhccCCCCEEEEecCccchhhhhhccccCCccccccccCccCCCCCCCChhhHHhhhccc
Q 012352 181 DVA-RVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFR 247 (465)
Q Consensus 181 D~~-~ll~~~~~~~~p~i~~~MG~~G~~sRi~~~~~Gs~~tf~~~~~~~~sApGQ~~~~~l~~~~~~~ 247 (465)
|++ +|+. .. .+++|+||+.| +||+++++|||++||++++++ +||||+++++|++++++.
T Consensus 147 d~l~~Ll~---~~--~~i~~~MG~~G-iSRi~~~~fGS~lTy~~~~~~--sAPGQi~v~~l~~i~~~l 206 (216)
T PRK13576 147 EVLLPLLE---YE--NVTVMPMSVNP-LERIAFSLLGSKLIYSYAIEP--TAQGQLHYKKVKQILNYL 206 (216)
T ss_pred hHHHHHhc---cc--CccEEEcCCcc-HHHHHHHHhCCeeEEEecCCC--CCCCCccHHHHHHHHHHH
Confidence 775 5554 22 45889999999 999999999999999999975 999999999999999975
No 11
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=100.00 E-value=2.1e-48 Score=385.13 Aligned_cols=198 Identities=27% Similarity=0.413 Sum_probs=171.5
Q ss_pred CcceeeecCCCccccccHHHHHHHHHHcCCCeeEecccc-------ccHHHHHHHhhcCCCCeeEeccCchHHHhhhccc
Q 012352 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV-------DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDE 324 (465)
Q Consensus 252 ~~~~~~~iG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~-------~~l~~~~~~l~~~~~~G~~vT~P~K~~v~~~~d~ 324 (465)
++++||+||+||+||+||.|||++|+++|+|+.|.++++ ++++++++.++.++|.|+|||||||++|++++|+
T Consensus 3 ~~~~~gliG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~~~~~~l~~~~~~~~~~~~~G~nVT~P~K~~~~~~lD~ 82 (283)
T PRK14027 3 DSILLGLIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYLGFNGLNITHPYKQAVLPLLDE 82 (283)
T ss_pred CceEEEEECCCccccCCHHHHHHHHHHcCCCeEEEEEecccccCCHHHHHHHHHHHHhcCCCEEEECccCHHHHHHHhhh
Confidence 578999999999999999999999999999999999986 3799999999999999999999999999999999
Q ss_pred cCHHHHhccceeeEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCC
Q 012352 325 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG 404 (465)
Q Consensus 325 ~~~~A~~~gavNtv~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G 404 (465)
+++.|+.+||||||+++. +|+|+||||||.||+++|++.. .+.++|+++|+|+||+|||++++|+++|
T Consensus 83 l~~~A~~iGAVNTv~~~~-~g~l~G~NTD~~Gf~~~L~~~~-----------~~~~~k~vlilGaGGaarAi~~aL~~~g 150 (283)
T PRK14027 83 VSEQATQLGAVNTVVIDA-TGHTTGHNTDVSGFGRGMEEGL-----------PNAKLDSVVQVGAGGVGNAVAYALVTHG 150 (283)
T ss_pred CCHHHHHhCCceEEEECC-CCcEEEEcCCHHHHHHHHHhcC-----------cCcCCCeEEEECCcHHHHHHHHHHHHCC
Confidence 999999999999999852 8999999999999999997532 2456899999999999999999999999
Q ss_pred C-eEEEEECCHHHHHHHHHHHCCc----c---cchhcccccCCCCeeEEEecCCCCCCCCCCCCCCC
Q 012352 405 A-RVVIANRTYDRARELAETVGGH----A---LSLADLENFNPEDGMILANTTSIGMQPKVDETPIP 463 (465)
Q Consensus 405 ~-~v~i~~R~~~~a~~la~~~~~~----~---~~~~~l~~~~~~~~DilInaT~~gm~~~~~~~p~~ 463 (465)
+ +|+|+||+.+++++|++++... . .++.++.+ ....+|+||||||+||.+. ++.|++
T Consensus 151 ~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~-~~~~~divINaTp~Gm~~~-~~~~~~ 215 (283)
T PRK14027 151 VQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIED-VIAAADGVVNATPMGMPAH-PGTAFD 215 (283)
T ss_pred CCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHH-HHhhcCEEEEcCCCCCCCC-CCCCCC
Confidence 8 8999999999999999887421 1 11111222 2346899999999999865 445654
No 12
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=100.00 E-value=4.8e-48 Score=383.73 Aligned_cols=200 Identities=31% Similarity=0.524 Sum_probs=174.1
Q ss_pred cCCCcceeeecCCCccccccHHHHHHHHHHcCCCeeEeccccc--cHHHHHHHhhcCCCCeeEeccCchHHHhhhccccC
Q 012352 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD 326 (465)
Q Consensus 249 ~~~~~~~~~~iG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~--~l~~~~~~l~~~~~~G~~vT~P~K~~v~~~~d~~~ 326 (465)
++.+|++|++||+||+||+||.|||++|+++|+|+.|.+++++ +|+++++.++..+|.|+|||||||++|++++|+++
T Consensus 3 ~~~~t~~~gliG~Pi~hSlSP~ihn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~l~~~~~~G~nVTiP~K~~~~~~~D~l~ 82 (288)
T PRK12749 3 VTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMRGTGVSMPNKQLACEYVDELT 82 (288)
T ss_pred cCCCceEEEEECCCcccccCHHHHHHHHHHcCCCeEEEEEecCHHHHHHHHHHHHhcCCCEEEECcCCHHHHHHHhccCC
Confidence 3456889999999999999999999999999999999999984 79999999998899999999999999999999999
Q ss_pred HHHHhccceeeEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-
Q 012352 327 TVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA- 405 (465)
Q Consensus 327 ~~A~~~gavNtv~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~- 405 (465)
+.|+.+||||||+++ +|+|+||||||.||+++|++. +.++++|+++|+|+||+|||++++|+.+|+
T Consensus 83 ~~A~~iGAVNTv~~~--~g~l~G~NTD~~Gf~~~l~~~-----------~~~~~~k~vlvlGaGGaarAi~~~l~~~g~~ 149 (288)
T PRK12749 83 PAAKLVGAINTIVND--DGYLRGYNTDGTGHIRAIKES-----------GFDIKGKTMVLLGAGGASTAIGAQGAIEGLK 149 (288)
T ss_pred HHHHHhCceeEEEcc--CCEEEEEecCHHHHHHHHHhc-----------CCCcCCCEEEEECCcHHHHHHHHHHHHCCCC
Confidence 999999999999876 899999999999999999753 245678999999999999999999999998
Q ss_pred eEEEEECC---HHHHHHHHHHHCCc------ccchhc---ccccCCCCeeEEEecCCCCCCCCCCCCCC
Q 012352 406 RVVIANRT---YDRARELAETVGGH------ALSLAD---LENFNPEDGMILANTTSIGMQPKVDETPI 462 (465)
Q Consensus 406 ~v~i~~R~---~~~a~~la~~~~~~------~~~~~~---l~~~~~~~~DilInaT~~gm~~~~~~~p~ 462 (465)
+|+|+||+ .+++++++++++.. ..++++ +.+ ...++|+||||||+||.|..+..|+
T Consensus 150 ~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~-~~~~aDivINaTp~Gm~~~~~~~~~ 217 (288)
T PRK12749 150 EIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAE-ALASADILTNGTKVGMKPLENESLV 217 (288)
T ss_pred EEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhh-hcccCCEEEECCCCCCCCCCCCCCC
Confidence 99999999 46999999988532 122221 112 3457899999999999986555443
No 13
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=100.00 E-value=6.8e-48 Score=382.51 Aligned_cols=199 Identities=29% Similarity=0.425 Sum_probs=174.4
Q ss_pred CCCcceeeecCCCccccccHHHHHHHHHHcCCCeeEecccc-------ccHHHHHHHhhcCCCCeeEeccCchHHHhhhc
Q 012352 250 GPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV-------DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCC 322 (465)
Q Consensus 250 ~~~~~~~~~iG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~-------~~l~~~~~~l~~~~~~G~~vT~P~K~~v~~~~ 322 (465)
+..+++|+|||+||+||+||.|||++|+++|+|+.|.++++ +++.++++.++.++|.|+|||||||++|++++
T Consensus 2 ~~~~~~~~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~v~~~~l~~~~~~l~~~~~~G~nVTiP~K~~v~~~~ 81 (284)
T PRK12549 2 SRPSFLAGLIGAGIQASLSPAMHEAEGDAQGLRYVYRLIDLDALGLTADALPELLDAAERMGFAGLNITHPCKQAVIPHL 81 (284)
T ss_pred CccceEEEEECCCcccccCHHHHHHHHHHcCCCeEEEEEeeccccCCHHHHHHHHHHHHhcCCCEEEECcCCHHHHHHHh
Confidence 44678999999999999999999999999999999999986 37899999999999999999999999999999
Q ss_pred cccCHHHHhccceeeEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccchhHHHHHHHHHH
Q 012352 323 DEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKA 402 (465)
Q Consensus 323 d~~~~~A~~~gavNtv~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg~g~ai~~~L~~ 402 (465)
|++++.|+.+||||||+++ +|+|+||||||.||+++|++.. ..+.+|+|+|+|+||+|++++++|..
T Consensus 82 D~~~~~A~~iGAvNTv~~~--~g~l~G~NTD~~G~~~~l~~~~-----------~~~~~k~vlIlGaGGaaraia~aL~~ 148 (284)
T PRK12549 82 DELSDDARALGAVNTVVFR--DGRRIGHNTDWSGFAESFRRGL-----------PDASLERVVQLGAGGAGAAVAHALLT 148 (284)
T ss_pred ccCCHHHHHhCCceEEEec--CCEEEEEcCCHHHHHHHHHhhc-----------cCccCCEEEEECCcHHHHHHHHHHHH
Confidence 9999999999999999886 8999999999999999997632 24567999999999999999999999
Q ss_pred CCC-eEEEEECCHHHHHHHHHHHCCc-----ccchhcccccCCCCeeEEEecCCCCCCCCCCCCCCC
Q 012352 403 KGA-RVVIANRTYDRARELAETVGGH-----ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIP 463 (465)
Q Consensus 403 ~G~-~v~i~~R~~~~a~~la~~~~~~-----~~~~~~l~~~~~~~~DilInaT~~gm~~~~~~~p~~ 463 (465)
.|+ +|+|+||+.++++++++++... ...++++.+ .+.++|+||||||+||.+. +..|++
T Consensus 149 ~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~-~~~~aDiVInaTp~Gm~~~-~~~~~~ 213 (284)
T PRK12549 149 LGVERLTIFDVDPARAAALADELNARFPAARATAGSDLAA-ALAAADGLVHATPTGMAKH-PGLPLP 213 (284)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccchHh-hhCCCCEEEECCcCCCCCC-CCCCCC
Confidence 998 8999999999999999887421 122333333 3567899999999999875 345654
No 14
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=100.00 E-value=3.2e-47 Score=379.04 Aligned_cols=201 Identities=34% Similarity=0.543 Sum_probs=176.0
Q ss_pred ccCCCcceeeecCCCccccccHHHHHHHHHHcCCCeeEeccccc--cHHHHHHHhhcCCCCeeEeccCchHHHhhhcccc
Q 012352 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEV 325 (465)
Q Consensus 248 ~~~~~~~~~~~iG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~--~l~~~~~~l~~~~~~G~~vT~P~K~~v~~~~d~~ 325 (465)
.++..|++|+|||+||+||+||.|||++|+++|+|+.|.+++++ ++.++++.++.++|.|+|||||||++|++++|++
T Consensus 4 ~~~~~~~~~~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVT~P~K~~v~~~ld~~ 83 (289)
T PRK12548 4 RISGTTGLLGLIGSPVGHSGSPAMYNYSFQKAGLDYAYLAFDIPVDKVPDAIKAIKTFNMRGANVTMPCKSEAAKYMDEL 83 (289)
T ss_pred ccCCceeEEEEEcCCcccccCHHHHHHHHHHcCCCEEEEEEecCHHHHHHHHHHHHHCCCCEEEECccCHHHHHHHhhcC
Confidence 35667889999999999999999999999999999999999984 7999999999899999999999999999999999
Q ss_pred CHHHHhccceeeEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC
Q 012352 326 DTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA 405 (465)
Q Consensus 326 ~~~A~~~gavNtv~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~ 405 (465)
++.|+.+||||||+++ +|+|+||||||.||+.+|++.. ..+++|+++|+|+||+|++++++|+..|+
T Consensus 84 ~~~A~~iGavNTi~~~--~g~l~G~NTD~~G~~~~l~~~~-----------~~~~~k~vlI~GAGGagrAia~~La~~G~ 150 (289)
T PRK12548 84 SPAARIIGAVNTIVND--DGKLTGHITDGLGFVRNLREHG-----------VDVKGKKLTVIGAGGAATAIQVQCALDGA 150 (289)
T ss_pred CHHHHHhCceeEEEeE--CCEEEEEecCHHHHHHHHHhcC-----------CCcCCCEEEEECCcHHHHHHHHHHHHCCC
Confidence 9999999999999887 8999999999999999997632 34678999999999999999999999999
Q ss_pred -eEEEEECCH---HHHHHHHHHHCCc-----c--cchhc---ccccCCCCeeEEEecCCCCCCCCCCCCCC
Q 012352 406 -RVVIANRTY---DRARELAETVGGH-----A--LSLAD---LENFNPEDGMILANTTSIGMQPKVDETPI 462 (465)
Q Consensus 406 -~v~i~~R~~---~~a~~la~~~~~~-----~--~~~~~---l~~~~~~~~DilInaT~~gm~~~~~~~p~ 462 (465)
+|+|+||+. ++++++++++... . .++++ +.+ .+..+|+||||||+||.|..+.+|+
T Consensus 151 ~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~-~~~~~DilINaTp~Gm~~~~~~~~~ 220 (289)
T PRK12548 151 KEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKA-EIASSDILVNATLVGMKPNDGETNI 220 (289)
T ss_pred CEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHh-hhccCCEEEEeCCCCCCCCCCCCCC
Confidence 699999997 7899988877421 1 23332 222 3456799999999999987777777
No 15
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=100.00 E-value=1.2e-46 Score=373.04 Aligned_cols=201 Identities=37% Similarity=0.627 Sum_probs=176.6
Q ss_pred CCCcceeeecCCCccccccHHHHHHHHHHcCCCeeEecccc--ccHHHHHHHhhcCCCCeeEeccCchHHHhhhccccCH
Q 012352 250 GPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDT 327 (465)
Q Consensus 250 ~~~~~~~~~iG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~--~~l~~~~~~l~~~~~~G~~vT~P~K~~v~~~~d~~~~ 327 (465)
+.+|++|+|||+||+||+||.|||++|+++|+|+.|.++++ +++.++++.++.++|.|+|||||||++|++++|++++
T Consensus 2 ~~~~~~~~viG~pi~hS~SP~~hn~~~~~~gl~~~y~~~~v~~~~l~~~~~~~~~~~~~G~nVT~P~K~~~~~~~d~~~~ 81 (278)
T PRK00258 2 TGKTRLYAVIGNPIAHSKSPLIHNAAFKQLGLDGVYLAILVPPEDLEDAVKGFFALGGRGANVTVPFKEAAFALADELSE 81 (278)
T ss_pred CCceeEEEEECCchhcccCHHHHHHHHHHcCCCcEEEEEecCHHHHHHHHHHHHhCCCCEEEECcCCHHHHHHHhhcCCH
Confidence 46789999999999999999999999999999999999999 5899999999988999999999999999999999999
Q ss_pred HHHhccceeeEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-e
Q 012352 328 VAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-R 406 (465)
Q Consensus 328 ~A~~~gavNtv~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~-~ 406 (465)
.|+.+||||||+++ +|+|+||||||.||++++++.. +.++.+|+|+|+|+||+|++++++|+.+|+ +
T Consensus 82 ~A~~igavNtv~~~--~g~l~G~NTD~~G~~~~l~~~~----------~~~~~~k~vlVlGaGg~a~ai~~aL~~~g~~~ 149 (278)
T PRK00258 82 RARLIGAVNTLVLE--DGRLIGDNTDGIGFVRALEERL----------GVDLKGKRILILGAGGAARAVILPLLDLGVAE 149 (278)
T ss_pred HHHHhCCceEEEee--CCEEEEEcccHHHHHHHHHhcc----------CCCCCCCEEEEEcCcHHHHHHHHHHHHcCCCE
Confidence 99999999999976 8999999999999999997532 145778999999999999999999999996 9
Q ss_pred EEEEECCHHHHHHHHHHHCCcc-cch-hcccccCCCCeeEEEecCCCCCCCCCCCCCCC
Q 012352 407 VVIANRTYDRARELAETVGGHA-LSL-ADLENFNPEDGMILANTTSIGMQPKVDETPIP 463 (465)
Q Consensus 407 v~i~~R~~~~a~~la~~~~~~~-~~~-~~l~~~~~~~~DilInaT~~gm~~~~~~~p~~ 463 (465)
|+|+||+.+++++++++++... +.+ .+..+ .+.++|+||||||.||.+..+.+|++
T Consensus 150 V~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~-~~~~~DivInaTp~g~~~~~~~~~~~ 207 (278)
T PRK00258 150 ITIVNRTVERAEELAKLFGALGKAELDLELQE-ELADFDLIINATSAGMSGELPLPPLP 207 (278)
T ss_pred EEEEeCCHHHHHHHHHHhhhccceeecccchh-ccccCCEEEECCcCCCCCCCCCCCCC
Confidence 9999999999999998886321 222 12223 45679999999999998765555654
No 16
>PRK01261 aroD 3-dehydroquinate dehydratase; Provisional
Probab=100.00 E-value=2.2e-46 Score=358.21 Aligned_cols=215 Identities=20% Similarity=0.291 Sum_probs=180.9
Q ss_pred cccccc--cccCCCCCCcEEEEeeccCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCCch--hHHHHHHhhCCCcEEEEe
Q 012352 9 ASGSKL--VSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR--ENIKTLIKESPVPTLFTY 84 (465)
Q Consensus 9 ~~~~~~--~~~~~~~~~~~icv~l~~~t~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~--~~l~~l~~~~~~PiI~T~ 84 (465)
-||-|+ .+-+++..+|+|||||+++|.+|++++++.+...++|+||||+|+|.+.+.. ..+...++..+.|+|||+
T Consensus 4 ~~~~~~~v~~~~~g~~~p~Icvpi~~~~~ee~~~~~~~~~~~~aDivE~RlD~l~~~~~~~~~~~~~~l~~~~~p~I~T~ 83 (229)
T PRK01261 4 YSGDKISIGKFVIGNMQPIVVESIFFKDIKEMKERFKTKVLSDKNLYEIRFDLFHDHSIESEPEIISALNEMDIDYIFTY 83 (229)
T ss_pred ccCCeEEEeCeEeCCCCcEEEEEeCCCCHHHHHHHHHHhhcCCCCEEEEEeeccCCCChHHHHHHHHHHhhcCCCEEEEE
Confidence 356554 6889999999999999999999999999988778999999999999875442 222233344589999999
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHHhCCcEEEEeeccccchhHHHHhcCCCCcEEEEEeccCCCCCCHHHHHHHHHHHHH
Q 012352 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQA 164 (465)
Q Consensus 85 R~~~eGG~~~~~~~~~~~~l~~~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~~iI~S~H~f~~tps~~el~~~~~~~~~ 164 (465)
|+. ++ .++++.+++.++||||||++...++ . .+..++++|+||| ||+.++|.+++++|.+
T Consensus 84 R~~--------~~---~~~l~~a~~~~~d~vDIEl~~~~~~----~-~~~~~~kvIvS~H----tp~~eeL~~~l~~m~~ 143 (229)
T PRK01261 84 RGV--------DA---RKYYETAIDKMPPAVDLDINLIGKL----E-FRPRNTMLMVSYH----TNNSDNMPAILDIMNE 143 (229)
T ss_pred cCC--------CH---HHHHHHHHhhCCCEEEEEcccchhh----h-hhcCCCeEEEEeC----CCCHHHHHHHHHHHHH
Confidence 942 21 3678888887799999999873332 1 2357999999999 7889999999999999
Q ss_pred cCCCEEEEEeecCCHHHHHHHHHH----hccCCCCEEEEecCccchhhhhhccccCCccccccccCccCCCCCCCChhhH
Q 012352 165 SGADIVKFATTALDITDVARVFQI----TVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 240 (465)
Q Consensus 165 ~gadivKia~~~~~~~D~~~ll~~----~~~~~~p~i~~~MG~~G~~sRi~~~~~Gs~~tf~~~~~~~~sApGQ~~~~~l 240 (465)
+||||+|+|+||++.+|+++++.. ..+.+.|+|+||||+ ++||+++++|||++||++++++ +||||+++++|
T Consensus 144 ~gaDI~KiAvmp~~~~Dvl~~l~~~~~~~~~~~~p~i~isMG~--~iSRi~~~~fGS~lTyas~~~~--sAPGQi~v~~l 219 (229)
T PRK01261 144 KNPDYVKVACNYNDNKKFVDDLQYILMKKDEKYKPIVFIPMGR--EFLRIFSGYYVSDIVYARYDNE--TAPGQPKRDYY 219 (229)
T ss_pred hCCCEEEEEeCCCChHHHHHHHHHHHHHHhcCCCCEEEEECCc--HHHHHHHHHHCCceEEeeCCCC--CCCCCCCHHHH
Confidence 999999999999999998877753 234578999999999 9999999999999999999975 99999999999
Q ss_pred Hhhhccc
Q 012352 241 LDLYNFR 247 (465)
Q Consensus 241 ~~~~~~~ 247 (465)
+++++..
T Consensus 220 ~~~~~~~ 226 (229)
T PRK01261 220 ESAFIKY 226 (229)
T ss_pred HHHHHHh
Confidence 9999864
No 17
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=100.00 E-value=2.1e-45 Score=361.56 Aligned_cols=194 Identities=27% Similarity=0.419 Sum_probs=168.7
Q ss_pred ccCCCcce-eeecCCCccccccHHHHHHHHHHcCCCeeEeccccccHHHHHHHhhcCCCCeeEeccCchHHHhhhccccC
Q 012352 248 QMGPDTKV-FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD 326 (465)
Q Consensus 248 ~~~~~~~~-~~~iG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~~l~~~~~~l~~~~~~G~~vT~P~K~~v~~~~d~~~ 326 (465)
+++++|++ |+|||+| ||+||.|||++|+++|+|+.|.+++.++++++++.++.++|.|+|||||||++|++++|+++
T Consensus 4 ~~~~~~~~~~gliG~P--~~~Sp~ihn~~f~~~gl~~~Y~~~~~~~l~~~~~~l~~~~~~G~nVT~P~K~~~~~~lD~l~ 81 (272)
T PRK12550 4 MINKDTQLCISLAARP--SNFGTRFHNYLYEALGLNFLYKAFTTTDLTAAIGGVRALGIRGCAVSMPFKEAVIPLVDELD 81 (272)
T ss_pred cCCCCceEEEEEEccc--hhcCHHHHHHHHHHcCCCcEEEecCHhHHHHHHHHHHhcCCCEEEECcCCHHHHHHHhhcCC
Confidence 45677885 9999999 77789999999999999999999998899999999999999999999999999999999999
Q ss_pred HHHHhccceeeEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-
Q 012352 327 TVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA- 405 (465)
Q Consensus 327 ~~A~~~gavNtv~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~- 405 (465)
+.|+.+||||||+++ +|+|+||||||.||+++|++. . .. .+++++|+|+||+|||++++|+++|+
T Consensus 82 ~~A~~iGAVNTi~~~--~g~l~G~NTD~~Gf~~~L~~~-~----------~~-~~~~vlilGaGGaarAi~~aL~~~g~~ 147 (272)
T PRK12550 82 PSAQAIESVNTIVNT--DGHLKAYNTDYIAIAKLLASY-Q----------VP-PDLVVALRGSGGMAKAVAAALRDAGFT 147 (272)
T ss_pred HHHHHhCCeeEEEee--CCEEEEEecCHHHHHHHHHhc-C----------CC-CCCeEEEECCcHHHHHHHHHHHHCCCC
Confidence 999999999999887 899999999999999999763 1 22 25789999999999999999999998
Q ss_pred eEEEEECCHHHHHHHHHHHCCcccchh-cccccCCCCeeEEEecCCCCCCCCC--CCCCCC
Q 012352 406 RVVIANRTYDRARELAETVGGHALSLA-DLENFNPEDGMILANTTSIGMQPKV--DETPIP 463 (465)
Q Consensus 406 ~v~i~~R~~~~a~~la~~~~~~~~~~~-~l~~~~~~~~DilInaT~~gm~~~~--~~~p~~ 463 (465)
+|+|+||+.++++++++.++. ++. ++ ....+|+||||||+||.+.. +.+|++
T Consensus 148 ~i~i~nR~~~~a~~la~~~~~---~~~~~~---~~~~~dlvINaTp~Gm~~~~~~~~~pi~ 202 (272)
T PRK12550 148 DGTIVARNEKTGKALAELYGY---EWRPDL---GGIEADILVNVTPIGMAGGPEADKLAFP 202 (272)
T ss_pred EEEEEeCCHHHHHHHHHHhCC---cchhhc---ccccCCEEEECCccccCCCCccccCCCC
Confidence 899999999999999988742 221 11 12458999999999998654 234554
No 18
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=100.00 E-value=3.5e-45 Score=363.02 Aligned_cols=192 Identities=29% Similarity=0.391 Sum_probs=165.8
Q ss_pred CcceeeecCCCccccccHHHHHHHHHHcCCCeeEeccccc---cHHHHHHHhhcCCCCeeEeccCchHHHhhhccccCHH
Q 012352 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD---DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTV 328 (465)
Q Consensus 252 ~~~~~~~iG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~---~l~~~~~~l~~~~~~G~~vT~P~K~~v~~~~d~~~~~ 328 (465)
.+++|++||+||+||+||.|||++|+++|+|+.|.++++. ++.++++.+ ..+|.|+|||||||+++++++|++++.
T Consensus 4 ~~~~~~liG~Pi~hS~SP~ihn~~f~~~gl~~~y~~~~~~~~~~l~~~~~~~-~~~~~G~nVT~P~K~~~~~~~d~~~~~ 82 (282)
T TIGR01809 4 GPKKAFIIGKPIAHSRSPHLHNAGYEILGLPDKTYEFETCSAEELKEVLSGF-GPQFGGASVTIPLKFAILRFADEHTDR 82 (282)
T ss_pred CCeEEEEEcCCchhccCHHHHHHHHHHcCCCcEEEeeecCCHHHHHHHHHhc-CCCCcEEEECCCCHHHHHHHhhcCCHH
Confidence 3678999999999999999999999999999999999873 688888877 459999999999999999999999999
Q ss_pred HHhccceeeEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-eE
Q 012352 329 AKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RV 407 (465)
Q Consensus 329 A~~~gavNtv~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~-~v 407 (465)
|+.+||||||+++. +|+|+||||||.||+.+|++... ..++++|+|+|+|+||+||+++++|.++|+ +|
T Consensus 83 A~~iGAVNTv~~~~-~g~l~G~NTD~~G~~~~l~~~~~---------~~~~~~k~vlvlGaGGaarai~~aL~~~G~~~i 152 (282)
T TIGR01809 83 ASLIGSVNTLLRTQ-NGIWKGDNTDWDGIAGALANIGK---------FEPLAGFRGLVIGAGGTSRAAVYALASLGVTDI 152 (282)
T ss_pred HHHhCceeEEEEcC-CCcEEEecCCHHHHHHHHHhhCC---------ccccCCceEEEEcCcHHHHHHHHHHHHcCCCeE
Confidence 99999999999853 88999999999999999976310 014678999999999999999999999998 89
Q ss_pred EEEECCHHHHHHHHHHHCCc--ccch---hcccccCCCCeeEEEecCCCCCCC
Q 012352 408 VIANRTYDRARELAETVGGH--ALSL---ADLENFNPEDGMILANTTSIGMQP 455 (465)
Q Consensus 408 ~i~~R~~~~a~~la~~~~~~--~~~~---~~l~~~~~~~~DilInaT~~gm~~ 455 (465)
+|+||+.+++++++++++.. ...+ +++.. .+.++|+||||||+||..
T Consensus 153 ~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~-~~~~~DiVInaTp~g~~~ 204 (282)
T TIGR01809 153 TVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLA-IEKAAEVLVSTVPADVPA 204 (282)
T ss_pred EEEeCCHHHHHHHHHHhhhcCcceeccchhhhhh-cccCCCEEEECCCCCCCC
Confidence 99999999999999988532 1112 23323 346799999999999953
No 19
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=100.00 E-value=3.1e-44 Score=354.55 Aligned_cols=193 Identities=39% Similarity=0.625 Sum_probs=169.9
Q ss_pred ceeeecCCCccccccHHHHHHHHHHcCCCeeEeccccc--cHHHHHHHhhcCCCCeeEeccCchHHHhhhccccCHHHHh
Q 012352 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKS 331 (465)
Q Consensus 254 ~~~~~iG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~--~l~~~~~~l~~~~~~G~~vT~P~K~~v~~~~d~~~~~A~~ 331 (465)
++|||+|+||+||+||.|||++|+++|+|+.|.+++++ +++++++.++.++|.|+|||||||+++++++|++++.|+.
T Consensus 1 ~~~~viG~pi~hS~SP~~hn~~~~~~g~~~~y~~~~v~~~~l~~~~~~~~~~~~~G~nVT~P~K~~~~~~~d~~~~~A~~ 80 (270)
T TIGR00507 1 KLYGVIGNPIAHSKSPLIHNAFFKQLGLEGPYIAFLVPPDDLEDALSGFFALGFKGANVTSPFKEEAFQFLDEIDERAKL 80 (270)
T ss_pred CEEEEECCccccccCHHHHHHHHHHcCCCcEEEEEecCHHHHHHHHHHHHhcCCCEEEECcCCHHHHHHHhhhCCHHHHH
Confidence 47999999999999999999999999999999999984 7999999999899999999999999999999999999999
Q ss_pred ccceeeEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEE
Q 012352 332 IGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIAN 411 (465)
Q Consensus 332 ~gavNtv~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~ 411 (465)
+||||||+++ +|+|+||||||.||+++|++.. ...++|+++|+|+||+|++++++|++.|++|++++
T Consensus 81 ~gavNti~~~--~g~l~g~NTD~~G~~~~l~~~~-----------~~~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~ 147 (270)
T TIGR00507 81 AGAVNTLKLE--DGKLVGYNTDGIGLVSDLERLI-----------PLRPNQRVLIIGAGGAARAVALPLLKADCNVIIAN 147 (270)
T ss_pred hCCceEEEee--CCEEEEEcCCHHHHHHHHHhcC-----------CCccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEe
Confidence 9999999977 8999999999999999997621 23567899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHCCc----ccchhcccccCCCCeeEEEecCCCCCCCCCCCCCC
Q 012352 412 RTYDRARELAETVGGH----ALSLADLENFNPEDGMILANTTSIGMQPKVDETPI 462 (465)
Q Consensus 412 R~~~~a~~la~~~~~~----~~~~~~l~~~~~~~~DilInaT~~gm~~~~~~~p~ 462 (465)
|+.+++++++++++.. ..++++. ...++|+||||||.||.+..++.|+
T Consensus 148 R~~~~~~~la~~~~~~~~~~~~~~~~~---~~~~~DivInatp~gm~~~~~~~~~ 199 (270)
T TIGR00507 148 RTVSKAEELAERFQRYGEIQAFSMDEL---PLHRVDLIINATSAGMSGNIDEPPV 199 (270)
T ss_pred CCHHHHHHHHHHHhhcCceEEechhhh---cccCccEEEECCCCCCCCCCCCCCC
Confidence 9999999999887531 1122221 2346899999999999876655565
No 20
>KOG0692 consensus Pentafunctional AROM protein [Amino acid transport and metabolism]
Probab=99.95 E-value=3.5e-31 Score=267.25 Aligned_cols=399 Identities=17% Similarity=0.078 Sum_probs=316.8
Q ss_pred cccCCCCCCcEEEEeeccCCHHHHHHHHH----hhhhcCCCEEEEEecCCCCCC-chhHHHHHHhhCCCcEEEEeccCCC
Q 012352 15 VSGGMRKNPTLICVPIMGESVDKMVVDMG----KANASGADLVEIRLDGLKNFN-PRENIKTLIKESPVPTLFTYRPIWE 89 (465)
Q Consensus 15 ~~~~~~~~~~~icv~l~~~t~~e~~~~~~----~~~~~~~D~vElRlD~l~~~~-~~~~l~~l~~~~~~PiI~T~R~~~e 89 (465)
.+-+++++.-.+| .+++.+++..+. +..+.+++++|.|.|.+..++ +.+.....+....+|.|++.|.+||
T Consensus 86 ~~~taeKas~iV~----~pdir~i~~~i~~pgSKs~snralllaa~~eg~~~~~n~L~sddt~~m~sal~~L~~~~~~we 161 (595)
T KOG0692|consen 86 SVSTAEKASEIVL----QPDIREISGLIKLPGSKSLSNRALLLAALSEGTTVVDNLLNSDDTNYMLSALKTLGLNVETWE 161 (595)
T ss_pred cchhhhhcchhhc----ChhHHHhhceeeCCCCchhhhhHHHHHHHhccceeccccccccchhhhhhhHHHhccccceec
Confidence 3456667777777 444444443222 223456777777777666554 2222333334467899999999999
Q ss_pred CCC---CCCCHHHHHHHHHHHHHhCCcEEEEeeccccchhHHHHhcCCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHcC
Q 012352 90 GGQ---YDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASG 166 (465)
Q Consensus 90 GG~---~~~~~~~~~~~l~~~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~~iI~S~H~f~~tps~~el~~~~~~~~~~g 166 (465)
+|. .++...++-..++..++++.+|+|.|++..-++...+-+...+.-.||.+.|..+.+| +-.....+++.|
T Consensus 162 ~~~~~vveG~gg~~~~~~~~~~eLylgnagta~r~lt~~aa~v~~k~~~k~~Vl~g~hrmq~rP----i~~LV~~l~q~G 237 (595)
T KOG0692|consen 162 ENNRAVVEGCGGEFSIDSKSDIELYLGNAGTAMRPLTEFAAAVTAKGGNKSYVLDGVHRMQERP----IGDLVVGLKQLG 237 (595)
T ss_pred CCCEEEEEcCCCeeeechhhhhhhccCccchhhhhHHHHHHHhhcCCCCceEEEecCcccccCC----chHHHHHHHhcC
Confidence 998 6777666655677778889999999999877777666555445558999999999999 555567777889
Q ss_pred CCEEEEEeecCCHHHHHHHHHHhccCCCCEEEEecCccchhhhhhccccCCccccccccCccCCCCCCCChhhHHhhh--
Q 012352 167 ADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLY-- 244 (465)
Q Consensus 167 adivKia~~~~~~~D~~~ll~~~~~~~~p~i~~~MG~~G~~sRi~~~~~Gs~~tf~~~~~~~~sApGQ~~~~~l~~~~-- 244 (465)
|||.|++.+...+-|+. ....++..++|+++.-||+.+..+|+++|.++.++||..++..+-|+|+|.....|.+.|
T Consensus 238 adI~~~~~t~~~p~dv~-~~~~~~gg~v~l~g~Vssqy~~~~lm~ap~a~g~vt~~~vdgk~iS~pyv~mt~~lme~fgv 316 (595)
T KOG0692|consen 238 ADIECTLGTNCPPVDVN-ANGGLPGGKVKLSGSVSSQYLTALLMCAPLALGDVTIEIVDGKLISVPYVEMTLKLMERFGV 316 (595)
T ss_pred CceEEeccCCCCceeee-ccCCCcCceeeeeeeehhhHHHHHHHhhhhcCCceEEEeecCccccccchhHHHHHHHHhCc
Confidence 99999999999999997 555666678999999999999999999999999999999996678999999999999999
Q ss_pred cccccCCCcceeeecCCCccccccHHHHHHHHHHcCCCeeEeccccccHHHHHHHhhcCCCCeeE-eccCchHHHhhhcc
Q 012352 245 NFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFS-CTIPHKEAAVKCCD 323 (465)
Q Consensus 245 ~~~~~~~~~~~~~~iG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~~l~~~~~~l~~~~~~G~~-vT~P~K~~v~~~~d 323 (465)
++....+.++.|++.|.|..|+.+|.+||.+|.+--.++.|....++..-+++..-...++.||+ |+.|+|..+...++
T Consensus 317 n~~~s~~~~~~y~i~g~~y~~p~~~~ve~dAssa~yfla~aa~tg~~~tV~~~g~~Slqgda~Fa~vl~pmgc~v~qt~~ 396 (595)
T KOG0692|consen 317 NVEHSTSWDRFYVIGGQKYKSPGNAYVEGDASSASYFLAGAAITGETVTVEGCGTTSLQGDAKFAEVLEPMGCKVSQTEN 396 (595)
T ss_pred CeEecCCCcceEeccCcccCCCCCceeecccccccccceeeeEecceeeeccccceecccccchHhhhccccceeeeecc
Confidence 78888999999999999999999999999999999999888877766555555555567899999 99999999999999
Q ss_pred ccCHHHHhccceeeEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCCCCC---cccccCCcEEEEEccchhHHHHHHHH
Q 012352 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGG---VSSALAGKLFVVIGAGGAGKALAYGA 400 (465)
Q Consensus 324 ~~~~~A~~~gavNtv~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~---~~~~l~~k~vlV~GaGg~g~ai~~~L 400 (465)
+.+..+.-.||+|+..++.-|+...++|+|..+.+.+++..++..++ |.. .......+...|+|.++.+++..+..
T Consensus 397 svtv~gp~~ga~~~~~lr~iD~m~~m~d~~~t~svvA~~~~~~s~gd-ptti~~~as~rvket~r~ia~~~el~klg~~~ 475 (595)
T KOG0692|consen 397 SVTVTGPPRGAFGMRHLRAIDVMNKMPDVAMTLSVVALFAGLRSSGD-PTTIRDVASWRVKETERMIAICTELRKLGATV 475 (595)
T ss_pred cccccCCCCCcccceehhhhcccccccchhHhHhHHHHhhcccCCCC-CcccccccchhHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999998755788999999999999998876543221 110 01112335677889999999999888
Q ss_pred HHCCCeEEEEECCHHHHHHHHHHH
Q 012352 401 KAKGARVVIANRTYDRARELAETV 424 (465)
Q Consensus 401 ~~~G~~v~i~~R~~~~a~~la~~~ 424 (465)
.+.+..++|.+|+ +|.-++++..
T Consensus 476 ~E~~dg~~v~~~~-~k~lk~ae~~ 498 (595)
T KOG0692|consen 476 EEGSDGYCVITPP-EKKLKLAEID 498 (595)
T ss_pred cccCceEEEeCCc-hHhccchhhc
Confidence 8888889999999 7777777654
No 21
>PF08501 Shikimate_dh_N: Shikimate dehydrogenase substrate binding domain; InterPro: IPR013708 This domain is the substrate binding domain of shikimate dehydrogenase []. Shikimate dehydrogenase catalyses the fourth step of the mycobacterial Shikimate pathway, which results in the biosynthesis of chorismate. Chorismate is a precursor of aromatic amino acids, naphthoquinones, menaquinones and mycobactins [, ]. This pathway is an important target for antibacterial agents, especially against Mycobacterium tuberculosis, since it does not occur in mammals.; GO: 0004764 shikimate 3-dehydrogenase (NADP+) activity, 0055114 oxidation-reduction process; PDB: 3U62_A 2EGG_A 1P74_B 1P77_A 3O8Q_A 3TNL_C 3TOZ_G 1NYT_C 1VI2_B 1NPD_A ....
Probab=99.93 E-value=1.3e-26 Score=188.40 Aligned_cols=81 Identities=41% Similarity=0.806 Sum_probs=75.1
Q ss_pred ecCCCccccccHHHHHHHHHHcCCCeeEeccccc--cHHHHHHHhhcCCCCeeEeccCchHHHhhhccccCHHHHhccce
Q 012352 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAV 335 (465)
Q Consensus 258 ~iG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~--~l~~~~~~l~~~~~~G~~vT~P~K~~v~~~~d~~~~~A~~~gav 335 (465)
|+|+|++||+||.|||++|+++|+|+.|.+++++ +++++++.++..+|.|+|||||||+++++++|++++.|+.+|||
T Consensus 1 viG~pi~hS~SP~~hn~~f~~~g~~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~~VT~P~K~~~~~~~D~~~~~A~~igAv 80 (83)
T PF08501_consen 1 VIGNPISHSLSPLIHNAAFEALGLDAVYIPFEVEPEDLEDFLDALRAPNFRGLNVTMPHKEAAIPYLDELSPSAKAIGAV 80 (83)
T ss_dssp EEESSSTT-SHHHHHHHHHHHTTSSEEEEEEETSTTCHHHHHHHHHHTTESEEEE-TTSTTHHGGGSSEE-HHHHHHTS-
T ss_pred CcCCCcccccCHHHHHHHHHHcCCCcEEEEeecCHHHHHHHHHHHhcCCCCeeeecchHHHHHHHHhccCCHHHHHhCCc
Confidence 6899999999999999999999999999999996 99999999999999999999999999999999999999999999
Q ss_pred eeE
Q 012352 336 NCI 338 (465)
Q Consensus 336 Ntv 338 (465)
|||
T Consensus 81 Ntv 83 (83)
T PF08501_consen 81 NTV 83 (83)
T ss_dssp SEE
T ss_pred ccC
Confidence 997
No 22
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=99.82 E-value=9.8e-20 Score=180.24 Aligned_cols=160 Identities=23% Similarity=0.361 Sum_probs=131.7
Q ss_pred eeecCCCccccccHHHHHHHHHHcCCCeeEecc--cc--ccHHHHHHHhhcC-CCCeeEeccCchHHHhh--hccccCHH
Q 012352 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL--LV--DDIAKFFQTYSSN-DFAGFSCTIPHKEAAVK--CCDEVDTV 328 (465)
Q Consensus 256 ~~~iG~pi~hS~SP~~hn~~f~~~gl~~~y~~~--~~--~~l~~~~~~l~~~-~~~G~~vT~P~K~~v~~--~~d~~~~~ 328 (465)
.-++|+.-+.-.--.+|+++|+++|+++.|.++ ++ +++.+.++.++.. ++.|++||+|||+.+.+ ++|.+ +.
T Consensus 38 ~i~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~~l~~~i~~Ln~d~~v~Gi~VqlPlp~~i~~~~~ld~I-~~ 116 (283)
T PRK14192 38 TILVGDDPASATYVRMKGNACRRVGMDSLKVELPQETTTEQLLAKIEELNANPDVHGILLQHPVPAQIDERACFDAI-SL 116 (283)
T ss_pred EEEeCCChhHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCccccCHHHHHhcc-CH
Confidence 445564433333447999999999999999999 55 3788888888644 89999999999999999 99999 88
Q ss_pred HHhccceeeEEEeccCCe------EEEEeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccch-hHHHHHHHHH
Q 012352 329 AKSIGAVNCIIRRQSDGK------LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYGAK 401 (465)
Q Consensus 329 A~~~gavNtv~~~~~~g~------l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg-~g~ai~~~L~ 401 (465)
++.++++||+ + .|+ ++|+||| .|+++.|+.. +.+++||+|+|+|+|| +|++++..|.
T Consensus 117 aKDVdg~n~~-n---~G~l~~~~~~~~p~T~-~gii~~L~~~-----------~i~l~Gk~vvViG~gg~vGkpia~~L~ 180 (283)
T PRK14192 117 AKDVDGVTCL-G---FGRMAMGEAAYGSATP-AGIMRLLKAY-----------NIELAGKHAVVVGRSAILGKPMAMMLL 180 (283)
T ss_pred HHhcCCCCcc-c---cCccccCCCcccCCcH-HHHHHHHHHc-----------CCCCCCCEEEEECCcHHHHHHHHHHHH
Confidence 9999999999 3 466 8999999 9999999863 2578999999999999 9999999999
Q ss_pred HCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCC
Q 012352 402 AKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS 450 (465)
Q Consensus 402 ~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~ 450 (465)
+.|+.|++++|. ++.+++. ..++|+||||||
T Consensus 181 ~~gatVtv~~~~---t~~L~~~---------------~~~aDIvI~AtG 211 (283)
T PRK14192 181 NANATVTICHSR---TQNLPEL---------------VKQADIIVGAVG 211 (283)
T ss_pred hCCCEEEEEeCC---chhHHHH---------------hccCCEEEEccC
Confidence 999999999984 3444432 235688888874
No 23
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=99.43 E-value=2.4e-13 Score=120.62 Aligned_cols=78 Identities=46% Similarity=0.635 Sum_probs=67.1
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCc---ccchhcccccCCCCeeEEEecCCCC
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH---ALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~---~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
.++++++++|+|+||+|++++++|...|+ +|+|+||+.++++++++.++.. ..+++++.+ .+.++|+||||||++
T Consensus 8 ~~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~-~~~~~DivI~aT~~~ 86 (135)
T PF01488_consen 8 GDLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEE-ALQEADIVINATPSG 86 (135)
T ss_dssp STGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCH-HHHTESEEEE-SSTT
T ss_pred CCcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHH-HHhhCCeEEEecCCC
Confidence 46889999999999999999999999999 7999999999999999999533 456777664 456899999999999
Q ss_pred CCC
Q 012352 453 MQP 455 (465)
Q Consensus 453 m~~ 455 (465)
|++
T Consensus 87 ~~~ 89 (135)
T PF01488_consen 87 MPI 89 (135)
T ss_dssp STS
T ss_pred Ccc
Confidence 973
No 24
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=99.12 E-value=5.4e-11 Score=124.12 Aligned_cols=130 Identities=18% Similarity=0.219 Sum_probs=98.0
Q ss_pred cCchHHHhhhccccCHHHHhccceeeEEEec-----cCCeEEEEecc------HHHHH--HHHHhhhccCCCCCCCcccc
Q 012352 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQ-----SDGKLFGYNTD------YVGAI--SAIEDGLRGRLNVSGGVSSA 378 (465)
Q Consensus 312 ~P~K~~v~~~~d~~~~~A~~~gavNtv~~~~-----~~g~l~G~NTD------~~G~~--~~l~~~~~~~~~~~~~~~~~ 378 (465)
+-...+|+.|+++....|+..|+++.++.+. ..||-+-..|. -.+.+ ...++. ..+
T Consensus 110 VlGE~QIlgQVK~A~~~A~~~g~~g~~L~~lf~~A~~~aKrVrteT~I~~~~vSv~~~Av~la~~~-----------~~~ 178 (414)
T PRK13940 110 VLGEPQILGQVKDSYTLSKKNHAIGKELDRVFQKVFATAKRVRSETRIGHCPVSVAFSAITLAKRQ-----------LDN 178 (414)
T ss_pred hcCcHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhccCCCCCCcCHHHHHHHHHHHH-----------hcC
Confidence 4467899999999999999999999887552 11222111221 12211 112222 235
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHC-CcccchhcccccCCCCeeEEEecCCCCC
Q 012352 379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVG-GHALSLADLENFNPEDGMILANTTSIGM 453 (465)
Q Consensus 379 l~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~~~~a~~la~~~~-~~~~~~~~l~~~~~~~~DilInaT~~gm 453 (465)
+.+++++|+|+||+|++++.+|...|+ +|+|+||+.+++++++++++ ....+++++.+ .+.++|+|||||+...
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~-~l~~aDiVI~aT~a~~ 254 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQ-LIKKADIIIAAVNVLE 254 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHH-HhccCCEEEECcCCCC
Confidence 789999999999999999999999998 89999999999999999997 45567777765 5778999999998764
No 25
>PRK08291 ectoine utilization protein EutC; Validated
Probab=99.10 E-value=1.6e-10 Score=117.54 Aligned_cols=107 Identities=21% Similarity=0.212 Sum_probs=84.3
Q ss_pred HhccceeeEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccchhHHHHHHHHHH-CCC-eE
Q 012352 330 KSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKA-KGA-RV 407 (465)
Q Consensus 330 ~~~gavNtv~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg~g~ai~~~L~~-~G~-~v 407 (465)
...|++|+++.+ ++.|.|+|||+.|++.+.. +. ....++++|+|+|+.|++.+.++.. .++ +|
T Consensus 96 ~~tG~~~ai~~d--~~~lt~~rT~a~~~~a~~~--la-----------~~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V 160 (330)
T PRK08291 96 ARTGLVEALLLD--NGYLTDVRTAAAGAVAARH--LA-----------REDASRAAVIGAGEQARLQLEALTLVRPIREV 160 (330)
T ss_pred CCCCceEEEEcC--CchHHHHHHHHHHHHHHHH--hC-----------CCCCCEEEEECCCHHHHHHHHHHHhcCCCCEE
Confidence 356999999765 7889999999999999864 21 1235789999999999999999985 566 89
Q ss_pred EEEECCHHHHHHHHHHHCC----cccchhcccccCCCCeeEEEecCCCC
Q 012352 408 VIANRTYDRARELAETVGG----HALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 408 ~i~~R~~~~a~~la~~~~~----~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
+|++|+.++++++++++.. ....++++.+ .+.++|+||+|||..
T Consensus 161 ~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~-al~~aDiVi~aT~s~ 208 (330)
T PRK08291 161 RVWARDAAKAEAYAADLRAELGIPVTVARDVHE-AVAGADIIVTTTPSE 208 (330)
T ss_pred EEEcCCHHHHHHHHHHHhhccCceEEEeCCHHH-HHccCCEEEEeeCCC
Confidence 9999999999999987742 1122344444 456789999999976
No 26
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=99.07 E-value=2.5e-10 Score=116.01 Aligned_cols=106 Identities=19% Similarity=0.216 Sum_probs=84.0
Q ss_pred hccceeeEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccchhHHHHHHHHH-HCCC-eEE
Q 012352 331 SIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAK-AKGA-RVV 408 (465)
Q Consensus 331 ~~gavNtv~~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg~g~ai~~~L~-~~G~-~v~ 408 (465)
..|++|+++.+ ++.++|+|||+.|++.+.. +. ....++++|+|+|++|+..+.+|. ..+. +|+
T Consensus 94 ~tG~~~ai~~d--~~~lT~~RTaa~~~laa~~--la-----------~~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~ 158 (326)
T TIGR02992 94 RTGLLQALLLD--NGYLTDVRTAAAGAVAARH--LA-----------REDSSVVAIFGAGMQARLQLEALTLVRDIRSAR 158 (326)
T ss_pred CCCCceEEEcC--CchHHHHHHHHHHHHHHHH--hC-----------CCCCcEEEEECCCHHHHHHHHHHHHhCCccEEE
Confidence 45999999766 7889999999999998863 21 113578999999999999999997 4777 899
Q ss_pred EEECCHHHHHHHHHHHCC----cccchhcccccCCCCeeEEEecCCCC
Q 012352 409 IANRTYDRARELAETVGG----HALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 409 i~~R~~~~a~~la~~~~~----~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
|+||+.++++++++++.. ....++++.+ .+.++|+||+|||..
T Consensus 159 V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~-av~~aDiVvtaT~s~ 205 (326)
T TIGR02992 159 IWARDSAKAEALALQLSSLLGIDVTAATDPRA-AMSGADIIVTTTPSE 205 (326)
T ss_pred EECCCHHHHHHHHHHHHhhcCceEEEeCCHHH-HhccCCEEEEecCCC
Confidence 999999999999988742 2223344444 456899999999875
No 27
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=99.06 E-value=7e-10 Score=114.43 Aligned_cols=128 Identities=27% Similarity=0.371 Sum_probs=102.4
Q ss_pred chHHHhhhccccCHHHHhccceeeEEEec-----cCCeE------EEEeccHHHHHHH-H-HhhhccCCCCCCCcccccC
Q 012352 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQ-----SDGKL------FGYNTDYVGAISA-I-EDGLRGRLNVSGGVSSALA 380 (465)
Q Consensus 314 ~K~~v~~~~d~~~~~A~~~gavNtv~~~~-----~~g~l------~G~NTD~~G~~~~-l-~~~~~~~~~~~~~~~~~l~ 380 (465)
...+|++|++.....|++-|.+.+++.+. .-|+- +|.|-=..+.++. + ++. ..+++
T Consensus 109 GE~QILGQVK~Ay~~a~~~g~~g~~L~~lFqkAi~~gKrvRseT~I~~~~VSi~saAv~lA~~~-----------~~~L~ 177 (414)
T COG0373 109 GETQILGQVKDAYAKAQENGTLGKVLNRLFQKAISVGKRVRSETGIGKGAVSISSAAVELAKRI-----------FGSLK 177 (414)
T ss_pred CcHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhhcccCCCCCccchHHHHHHHHHHH-----------hcccc
Confidence 57899999999999999999999987552 12332 3333333333332 2 222 24588
Q ss_pred CcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCCCC
Q 012352 381 GKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGM 453 (465)
Q Consensus 381 ~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~gm 453 (465)
++++||+|+|.||..++.+|.+.|+ +|+|+|||.++|++|+++++..+..++++.. .+.++|+||.+|+...
T Consensus 178 ~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~-~l~~~DvVissTsa~~ 250 (414)
T COG0373 178 DKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALEELLE-ALAEADVVISSTSAPH 250 (414)
T ss_pred cCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHH-hhhhCCEEEEecCCCc
Confidence 9999999999999999999999998 9999999999999999999988888888877 6789999999998764
No 28
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=99.02 E-value=1.7e-09 Score=97.32 Aligned_cols=91 Identities=40% Similarity=0.657 Sum_probs=73.4
Q ss_pred ccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHCCcc--
Q 012352 352 TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHA-- 428 (465)
Q Consensus 352 TD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G-~~v~i~~R~~~~a~~la~~~~~~~-- 428 (465)
||+.||.+++++. +.++++++++|+|+|++|++++..|.+.| .+|++++|+.+++++++++++...
T Consensus 1 td~~g~~~a~~~~-----------~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~ 69 (155)
T cd01065 1 TDGLGFVRALEEA-----------GIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIA 69 (155)
T ss_pred CCHHHHHHHHHhh-----------CCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccc
Confidence 8999999999863 13467899999999999999999999997 589999999999999988876421
Q ss_pred cchhcccccCCCCeeEEEecCCCCCC
Q 012352 429 LSLADLENFNPEDGMILANTTSIGMQ 454 (465)
Q Consensus 429 ~~~~~l~~~~~~~~DilInaT~~gm~ 454 (465)
....+..+ ...++|+||+|||.++.
T Consensus 70 ~~~~~~~~-~~~~~Dvvi~~~~~~~~ 94 (155)
T cd01065 70 IAYLDLEE-LLAEADLIINTTPVGMK 94 (155)
T ss_pred eeecchhh-ccccCCEEEeCcCCCCC
Confidence 12233333 35679999999999875
No 29
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.96 E-value=2.8e-10 Score=119.59 Aligned_cols=133 Identities=29% Similarity=0.405 Sum_probs=101.3
Q ss_pred ccCchHHHhhhccccCHHHHhccceeeEEEec-----cCCeEEEEeccHHHHH-----HHHHhhhccCCCCCCCcccccC
Q 012352 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQ-----SDGKLFGYNTDYVGAI-----SAIEDGLRGRLNVSGGVSSALA 380 (465)
Q Consensus 311 T~P~K~~v~~~~d~~~~~A~~~gavNtv~~~~-----~~g~l~G~NTD~~G~~-----~~l~~~~~~~~~~~~~~~~~l~ 380 (465)
-+-.+.+|++|++..++.|+..|++|+++.+. ..++.++++|+..+.- .+++.... ...++.
T Consensus 110 ~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a~~~~k~v~~~t~i~~~~~Sv~~~Av~~a~~--------~~~~~~ 181 (423)
T PRK00045 110 MVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKAFSVAKRVRTETGIGAGAVSVASAAVELAKQ--------IFGDLS 181 (423)
T ss_pred hhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhHhhhcCCCCCCcCHHHHHHHHHHH--------hhCCcc
Confidence 34468899999999999999999999988320 1456777788854411 12222110 012467
Q ss_pred CcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCCC
Q 012352 381 GKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 381 ~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
+++++|+|+|++|+.++..|...|+ +|++++|+.++++++++.++....+++++.+ .+.++|+||+|||..
T Consensus 182 ~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~-~l~~aDvVI~aT~s~ 253 (423)
T PRK00045 182 GKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPE-ALAEADIVISSTGAP 253 (423)
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHH-HhccCCEEEECCCCC
Confidence 8999999999999999999999998 8999999999999999998765555555554 456799999999865
No 30
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.65 E-value=3.8e-08 Score=99.43 Aligned_cols=133 Identities=29% Similarity=0.387 Sum_probs=94.5
Q ss_pred ccCchHHHhhhccccCHHHHhccceeeEEEec-----cCCe------EEEEeccHHHHHHHHHhhhccCCCCCCCccccc
Q 012352 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQ-----SDGK------LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSAL 379 (465)
Q Consensus 311 T~P~K~~v~~~~d~~~~~A~~~gavNtv~~~~-----~~g~------l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l 379 (465)
-+-...+|+.|+++....|+..|.++.++.+. .-++ -.+.+-=..+.. +++.... ...++
T Consensus 106 ~v~GE~qIlgQvk~A~~~a~~~g~~~~~L~~lf~~a~~~~k~vr~et~i~~~~~sv~~~-Av~~a~~--------~~~~l 176 (311)
T cd05213 106 MVVGETQILGQVKNAYKLAKEAGTSGKLLNRLFQKAIKVGKRVRTETGISRGAVSISSA-AVELAEK--------IFGNL 176 (311)
T ss_pred hhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCcCHHHH-HHHHHHH--------HhCCc
Confidence 44568899999999999999999999887652 0011 111111112221 1221110 01236
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGM 453 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~gm 453 (465)
.+++++|+|+|.+|+.++..|...|+ +|++++|+++++++++++++....+++++.+ .+.++|+||.|||...
T Consensus 177 ~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~-~l~~aDvVi~at~~~~ 250 (311)
T cd05213 177 KGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELLE-LLNEADVVISATGAPH 250 (311)
T ss_pred cCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHH-HHhcCCEEEECCCCCc
Confidence 78999999999999999999998887 8999999999999999999875556655554 4567899999998754
No 31
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.65 E-value=8e-08 Score=90.23 Aligned_cols=98 Identities=27% Similarity=0.358 Sum_probs=72.8
Q ss_pred EEeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-
Q 012352 349 GYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG- 426 (465)
Q Consensus 349 G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~- 426 (465)
|-||-....+..+++.+... +.++++++++|+|+ |++|++++..|.+.|++|++++|+.++++++++.+..
T Consensus 3 G~~~ta~aav~~~~~~l~~~-------~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~ 75 (194)
T cd01078 3 GSNTTAAAAVAAAGKALELM-------GKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRAR 75 (194)
T ss_pred CcHHHHHHHHHHHHHHHHHh-------CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhh
Confidence 44566666666666555321 24678899999996 9999999999999999999999999999999887641
Q ss_pred ---cc--cch---hcccccCCCCeeEEEecCCCCCC
Q 012352 427 ---HA--LSL---ADLENFNPEDGMILANTTSIGMQ 454 (465)
Q Consensus 427 ---~~--~~~---~~l~~~~~~~~DilInaT~~gm~ 454 (465)
.. .++ +++.+ .+.++|+||+|||.|+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~-~~~~~diVi~at~~g~~ 110 (194)
T cd01078 76 FGEGVGAVETSDDAARAA-AIKGADVVFAAGAAGVE 110 (194)
T ss_pred cCCcEEEeeCCCHHHHHH-HHhcCCEEEECCCCCce
Confidence 11 112 22223 35678999999999984
No 32
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=98.63 E-value=8.5e-08 Score=92.48 Aligned_cols=89 Identities=21% Similarity=0.275 Sum_probs=64.2
Q ss_pred HHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC---eEEEEECC----HHHH-------HH
Q 012352 354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA---RVVIANRT----YDRA-------RE 419 (465)
Q Consensus 354 ~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~---~v~i~~R~----~~~a-------~~ 419 (465)
..|+..+++.. +.++++++++|+|+|++|+++++.|...|+ +|+++||+ .+++ +.
T Consensus 9 lAG~~~al~~~-----------g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~ 77 (226)
T cd05311 9 LAGLLNALKLV-----------GKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNE 77 (226)
T ss_pred HHHHHHHHHHh-----------CCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHH
Confidence 35677777652 246889999999999999999999999997 59999999 5554 44
Q ss_pred HHHHHCCcccchhcccccCCCCeeEEEecCCCCCCC
Q 012352 420 LAETVGGHALSLADLENFNPEDGMILANTTSIGMQP 455 (465)
Q Consensus 420 la~~~~~~~~~~~~l~~~~~~~~DilInaT~~gm~~ 455 (465)
+++.++....+. ++.+ .+.++|+|||+||.||.+
T Consensus 78 la~~~~~~~~~~-~l~~-~l~~~dvlIgaT~~G~~~ 111 (226)
T cd05311 78 IAKETNPEKTGG-TLKE-ALKGADVFIGVSRPGVVK 111 (226)
T ss_pred HHHHhccCcccC-CHHH-HHhcCCEEEeCCCCCCCC
Confidence 555553211111 2322 345689999999988864
No 33
>PLN00203 glutamyl-tRNA reductase
Probab=98.58 E-value=8.4e-08 Score=102.82 Aligned_cols=131 Identities=22% Similarity=0.241 Sum_probs=93.4
Q ss_pred CchHHHhhhccccCHHHHhccceeeEEEec-----cCCeEEEEecc------HHH--HHHHHHhhhccCCCCCCCccccc
Q 012352 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQ-----SDGKLFGYNTD------YVG--AISAIEDGLRGRLNVSGGVSSAL 379 (465)
Q Consensus 313 P~K~~v~~~~d~~~~~A~~~gavNtv~~~~-----~~g~l~G~NTD------~~G--~~~~l~~~~~~~~~~~~~~~~~l 379 (465)
-...+|+.|+++....|+..|.++.++.+. ..|+-+-..|. -.+ .+...++.++ ..++
T Consensus 194 lGE~QIlgQVK~A~~~A~~~g~~g~~L~~LF~~Ai~~~KrVRteT~I~~~~vSv~s~Av~la~~~~~---------~~~l 264 (519)
T PLN00203 194 LGEGQILAQVKQVVKVGQGVDGFGRNLSGLFKHAITAGKRVRTETNIASGAVSVSSAAVELALMKLP---------ESSH 264 (519)
T ss_pred hCChHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhcC---------CCCC
Confidence 357799999999999999999999887552 11222211222 111 1111222221 1237
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCc---ccchhcccccCCCCeeEEEecCCCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH---ALSLADLENFNPEDGMILANTTSIGM 453 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~---~~~~~~l~~~~~~~~DilInaT~~gm 453 (465)
.+++++|+|+|++|++++..|...|+ +|+|+||+.++++.++++++.. ..+++++.+ .+.++|+||+|||.+.
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~-al~~aDVVIsAT~s~~ 341 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLA-CAAEADVVFTSTSSET 341 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHH-HHhcCCEEEEccCCCC
Confidence 78999999999999999999999998 8999999999999999988532 234555544 4568999999998774
No 34
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.50 E-value=3.5e-07 Score=89.68 Aligned_cols=84 Identities=23% Similarity=0.330 Sum_probs=65.5
Q ss_pred cCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--------cchhcc----------cccCC
Q 012352 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--------LSLADL----------ENFNP 439 (465)
Q Consensus 379 l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--------~~~~~l----------~~~~~ 439 (465)
..+++++|+||. |+|++++..|++.|++|+++.|+.+++.++++++.... +|+.+. .+ ..
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~-~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKE-RG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHh-cC
Confidence 467899999995 99999999999999999999999999999999986421 233221 11 23
Q ss_pred CCeeEEEecCCCCCCCCCCCCCCC
Q 012352 440 EDGMILANTTSIGMQPKVDETPIP 463 (465)
Q Consensus 440 ~~~DilInaT~~gm~~~~~~~p~~ 463 (465)
..+|++||++|.|.+....+.+++
T Consensus 83 ~~IdvLVNNAG~g~~g~f~~~~~~ 106 (265)
T COG0300 83 GPIDVLVNNAGFGTFGPFLELSLD 106 (265)
T ss_pred CcccEEEECCCcCCccchhhCChH
Confidence 479999999999987644444543
No 35
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.50 E-value=8.3e-07 Score=88.64 Aligned_cols=95 Identities=27% Similarity=0.310 Sum_probs=70.2
Q ss_pred EEEEeccHHH--HHH-HHHhhhccCCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 012352 347 LFGYNTDYVG--AIS-AIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET 423 (465)
Q Consensus 347 l~G~NTD~~G--~~~-~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~ 423 (465)
...+|+...+ .+. +++.. ..++.+++++|+|.|++|++++..|..+|++|++++|+.++.+.+. +
T Consensus 125 va~~n~~~~Ae~ai~~al~~~-----------~~~l~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-~ 192 (287)
T TIGR02853 125 VAIYNSIPTAEGAIMMAIEHT-----------DFTIHGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARIT-E 192 (287)
T ss_pred eEEEccHhHHHHHHHHHHHhc-----------CCCCCCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H
Confidence 5668887544 332 33321 2578899999999999999999999999999999999988765543 3
Q ss_pred HCCcccchhcccccCCCCeeEEEecCCCCCC
Q 012352 424 VGGHALSLADLENFNPEDGMILANTTSIGMQ 454 (465)
Q Consensus 424 ~~~~~~~~~~l~~~~~~~~DilInaT~~gm~ 454 (465)
.+...+.++++.+ .+.++|+|||++|.++.
T Consensus 193 ~g~~~~~~~~l~~-~l~~aDiVint~P~~ii 222 (287)
T TIGR02853 193 MGLIPFPLNKLEE-KVAEIDIVINTIPALVL 222 (287)
T ss_pred CCCeeecHHHHHH-HhccCCEEEECCChHHh
Confidence 3433445555555 45789999999998763
No 36
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.36 E-value=1.1e-06 Score=84.27 Aligned_cols=75 Identities=35% Similarity=0.516 Sum_probs=61.3
Q ss_pred cCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-c--c--cchhc----------ccccCCCCe
Q 012352 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-H--A--LSLAD----------LENFNPEDG 442 (465)
Q Consensus 379 l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~--~--~~~~~----------l~~~~~~~~ 442 (465)
+++|.++|+||+ |+|.++++.|++.|++|+++.|..++.++|+++++. . . .|+.+ +.+ ..++.
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~-~~g~i 82 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPE-EFGRI 82 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHH-hhCcc
Confidence 457899999996 999999999999999999999999999999999983 2 1 23322 122 46789
Q ss_pred eEEEecCCCCCC
Q 012352 443 MILANTTSIGMQ 454 (465)
Q Consensus 443 DilInaT~~gm~ 454 (465)
|+|||++|+...
T Consensus 83 DiLvNNAGl~~g 94 (246)
T COG4221 83 DILVNNAGLALG 94 (246)
T ss_pred cEEEecCCCCcC
Confidence 999999987653
No 37
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.32 E-value=1.3e-06 Score=87.57 Aligned_cols=75 Identities=25% Similarity=0.296 Sum_probs=60.0
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCCCC
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGM 453 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~gm 453 (465)
.++.+++++|+|+|++|++++..|+.+|++|++++|++++. +.++.++...+.++++.+ .+.++|+||||+|..+
T Consensus 148 ~~l~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~-~~~~~~G~~~~~~~~l~~-~l~~aDiVI~t~p~~~ 222 (296)
T PRK08306 148 ITIHGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHL-ARITEMGLSPFHLSELAE-EVGKIDIIFNTIPALV 222 (296)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHcCCeeecHHHHHH-HhCCCCEEEECCChhh
Confidence 45678999999999999999999999999999999998764 344556655455555555 4568999999998764
No 38
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.28 E-value=1.5e-06 Score=91.31 Aligned_cols=127 Identities=29% Similarity=0.418 Sum_probs=87.9
Q ss_pred chHHHhhhccccCHHHHhccceeeEEEec-----cCCe-EE---EEeccH--HHHHH--HHHhhhccCCCCCCCcccccC
Q 012352 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQ-----SDGK-LF---GYNTDY--VGAIS--AIEDGLRGRLNVSGGVSSALA 380 (465)
Q Consensus 314 ~K~~v~~~~d~~~~~A~~~gavNtv~~~~-----~~g~-l~---G~NTD~--~G~~~--~l~~~~~~~~~~~~~~~~~l~ 380 (465)
...+|+.+++.....|+..|.++..+.+. .-++ +. +-+.+. .+... ..++.+ ..+.
T Consensus 111 GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k~vr~~t~i~~~~vSv~~~Av~la~~~~-----------~~l~ 179 (417)
T TIGR01035 111 GETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGKRVRTETDISAGAVSISSAAVELAERIF-----------GSLK 179 (417)
T ss_pred CChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhcCCCCCCcCHHHHHHHHHHHHh-----------CCcc
Confidence 44567888888888888888887654321 0011 11 111111 11111 112211 2467
Q ss_pred CcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCCC
Q 012352 381 GKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 381 ~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
+++++|+|+|.+|+.++..|...|+ +|++++|+.+++++++++++...++++++.+ .+.++|+||+||+..
T Consensus 180 ~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~-~l~~aDvVi~aT~s~ 251 (417)
T TIGR01035 180 GKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEE-YLAEADIVISSTGAP 251 (417)
T ss_pred CCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHH-HHhhCCEEEECCCCC
Confidence 8999999999999999999999996 9999999999999999988765555666555 456799999999765
No 39
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=98.15 E-value=3.1e-06 Score=85.82 Aligned_cols=121 Identities=12% Similarity=0.046 Sum_probs=78.8
Q ss_pred eccCchHHHhhhccccCHHHHhccceeeEEEec-----cCCeE------EEEeccHHHHHH-HHHhhhccCCCCCCCccc
Q 012352 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQ-----SDGKL------FGYNTDYVGAIS-AIEDGLRGRLNVSGGVSS 377 (465)
Q Consensus 310 vT~P~K~~v~~~~d~~~~~A~~~gavNtv~~~~-----~~g~l------~G~NTD~~G~~~-~l~~~~~~~~~~~~~~~~ 377 (465)
--+-...+|+.|+++....|+..|+++.++.+. ..||- +|.+-=-.+.+. .+.+.+ .
T Consensus 102 SmVlGE~QIlGQVK~Ay~~A~~~g~~g~~L~~lf~~A~~~aKrVRteT~I~~~~vSv~s~av~~~~~~-----------~ 170 (338)
T PRK00676 102 SLILGETEIQGQVKRAYLKAARERKLPFALHFLFQKALKEGKVFRSKGGAPYAEVTIESVVQQELRRR-----------Q 170 (338)
T ss_pred hhhcCcHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHh-----------C
Confidence 334467899999999999999999988876442 11222 222211222221 111212 3
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCC
Q 012352 378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS 450 (465)
Q Consensus 378 ~l~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~ 450 (465)
++.+|+|||+|+|.+|+.++.+|.+.|+ +|+|+||+... .. ++.. ..+.+ + ...++|+||.||+
T Consensus 171 ~l~~k~vLvIGaGem~~l~a~~L~~~g~~~i~v~nRt~~~-~~----~~~~--~~~~~-~-~~~~~DvVIs~t~ 235 (338)
T PRK00676 171 KSKKASLLFIGYSEINRKVAYYLQRQGYSRITFCSRQQLT-LP----YRTV--VREEL-S-FQDPYDVIFFGSS 235 (338)
T ss_pred CccCCEEEEEcccHHHHHHHHHHHHcCCCEEEEEcCCccc-cc----hhhh--hhhhh-h-cccCCCEEEEcCC
Confidence 5889999999999999999999999997 89999999743 11 1110 00111 2 2357899999864
No 40
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.14 E-value=4.9e-06 Score=82.00 Aligned_cols=77 Identities=21% Similarity=0.393 Sum_probs=61.8
Q ss_pred cccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--cc----cch---hcc-------cccCC
Q 012352 377 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA----LSL---ADL-------ENFNP 439 (465)
Q Consensus 377 ~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~--~~----~~~---~~l-------~~~~~ 439 (465)
.+.+|+.|||+|+| |.||+++..++++|+++.+|+.+.+...+.++++.. .+ +++ +++ .+ ..
T Consensus 34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~-e~ 112 (300)
T KOG1201|consen 34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKK-EV 112 (300)
T ss_pred hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHH-hc
Confidence 56789999999998 999999999999999999999999888888777752 21 232 222 23 56
Q ss_pred CCeeEEEecCCCCCC
Q 012352 440 EDGMILANTTSIGMQ 454 (465)
Q Consensus 440 ~~~DilInaT~~gm~ 454 (465)
+..|+|||++++-..
T Consensus 113 G~V~ILVNNAGI~~~ 127 (300)
T KOG1201|consen 113 GDVDILVNNAGIVTG 127 (300)
T ss_pred CCceEEEeccccccC
Confidence 789999999998754
No 41
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.12 E-value=2.6e-05 Score=77.48 Aligned_cols=128 Identities=20% Similarity=0.310 Sum_probs=83.2
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHH--hhhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v--~~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+.++++|++.....++- +++.+.++.+ .++.+.|+.|..|.-..+ ...++.+++ .+.+...+..- -|
T Consensus 54 ~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivq~Plp~~i~~~~i~~~I~p-~KDVDGl~~~n----~g 128 (286)
T PRK14175 54 KKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINP-EKDVDGFHPIN----IG 128 (286)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCc-ccCcccCCccc----hH
Confidence 567899999987666654 2566666666 577899999999964322 112222222 12222222220 11
Q ss_pred eEE-EE----eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEEECCHHH
Q 012352 346 KLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYGAKAKGARVVIANRTYDR 416 (465)
Q Consensus 346 ~l~-G~----NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg-~g~ai~~~L~~~G~~v~i~~R~~~~ 416 (465)
+++ |. -.--.|++..|+.. +.+++||+|+|+|.|+ +|+.++..|.+.|+.|++++|....
T Consensus 129 ~l~~~~~~~~PcTp~ai~~ll~~~-----------~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~ 194 (286)
T PRK14175 129 KLYIDEQTFVPCTPLGIMEILKHA-----------DIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKD 194 (286)
T ss_pred hHhcCCCCCCCCcHHHHHHHHHHc-----------CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchh
Confidence 221 11 11245666666653 2578999999999998 9999999999999999999886543
No 42
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.11 E-value=4.9e-06 Score=82.29 Aligned_cols=82 Identities=29% Similarity=0.439 Sum_probs=61.4
Q ss_pred cccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC----Cc-c----cchhcc---cc------c
Q 012352 377 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVG----GH-A----LSLADL---EN------F 437 (465)
Q Consensus 377 ~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~----~~-~----~~~~~l---~~------~ 437 (465)
..+.+|.|+|+||. |+|+++|+.|+..|++++++.|..++.+.+++++. .. . .|+.+. .. .
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR 87 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence 45789999999996 99999999999999999999888888888766553 12 1 232221 11 1
Q ss_pred CCCCeeEEEecCCCCCCCCCC
Q 012352 438 NPEDGMILANTTSIGMQPKVD 458 (465)
Q Consensus 438 ~~~~~DilInaT~~gm~~~~~ 458 (465)
.+++.|+|||++|++.....+
T Consensus 88 ~fg~vDvLVNNAG~~~~~~~~ 108 (282)
T KOG1205|consen 88 HFGRVDVLVNNAGISLVGFLE 108 (282)
T ss_pred hcCCCCEEEecCccccccccc
Confidence 578999999999998743333
No 43
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=98.06 E-value=2.5e-05 Score=73.89 Aligned_cols=91 Identities=22% Similarity=0.291 Sum_probs=67.1
Q ss_pred HHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhc
Q 012352 354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD 433 (465)
Q Consensus 354 ~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~ 433 (465)
+.|...+++..+...- .+.++++|+++|+|.|.+|+.+++.|.+.|++|+++++++++.+.+.+.++...++.++
T Consensus 6 g~Gv~~~~~~~~~~~~-----~~~~l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~~~~ 80 (200)
T cd01075 6 AYGVFLGMKAAAEHLL-----GTDSLEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVVAPEE 80 (200)
T ss_pred HHHHHHHHHHHHHHhc-----CCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEcchh
Confidence 4566555554432110 03578999999999999999999999999999999999999999988877654444433
Q ss_pred ccccCCCCeeEEEecCCCC
Q 012352 434 LENFNPEDGMILANTTSIG 452 (465)
Q Consensus 434 l~~~~~~~~DilInaT~~g 452 (465)
+.. .++|++|.|+.-+
T Consensus 81 l~~---~~~Dv~vp~A~~~ 96 (200)
T cd01075 81 IYS---VDADVFAPCALGG 96 (200)
T ss_pred hcc---ccCCEEEeccccc
Confidence 322 3689999887644
No 44
>PRK06141 ornithine cyclodeaminase; Validated
Probab=98.04 E-value=9.8e-06 Score=82.03 Aligned_cols=72 Identities=22% Similarity=0.270 Sum_probs=56.5
Q ss_pred CCcEEEEEccchhHHHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHCC---cccchhcccccCCCCeeEEEecCCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELAETVGG---HALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~-~G~-~v~i~~R~~~~a~~la~~~~~---~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
..++++|+|+|++|+.++.++.. .+. +|+|+||++++++++++++.. .....++..+ .+.++|+||++|+..
T Consensus 124 ~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~-av~~aDIVi~aT~s~ 200 (314)
T PRK06141 124 DASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEA-AVRQADIISCATLST 200 (314)
T ss_pred CCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHH-HHhcCCEEEEeeCCC
Confidence 46899999999999999987765 565 899999999999999998742 1222233333 456799999999966
No 45
>PRK07340 ornithine cyclodeaminase; Validated
Probab=98.00 E-value=2.1e-05 Score=79.19 Aligned_cols=74 Identities=20% Similarity=0.142 Sum_probs=58.4
Q ss_pred cCCcEEEEEccchhHHHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHCCcc--cchhcccccCCCCeeEEEecCCCCC
Q 012352 379 LAGKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELAETVGGHA--LSLADLENFNPEDGMILANTTSIGM 453 (465)
Q Consensus 379 l~~k~vlV~GaGg~g~ai~~~L~~-~G~-~v~i~~R~~~~a~~la~~~~~~~--~~~~~l~~~~~~~~DilInaT~~gm 453 (465)
...++++|+|+|+.|+..+.++.. .+. +|+|++|++++++++++++.... +..+++.+ .+.++|+||+|||...
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~~~~~-av~~aDiVitaT~s~~ 200 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPLDGEA-IPEAVDLVVTATTSRT 200 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEECCHHH-HhhcCCEEEEccCCCC
Confidence 356899999999999999999975 676 89999999999999999885321 11233444 4568999999999764
No 46
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=98.00 E-value=1.5e-05 Score=73.36 Aligned_cols=58 Identities=26% Similarity=0.304 Sum_probs=45.6
Q ss_pred cccCCcEEEEEccchh-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCCC
Q 012352 377 SALAGKLFVVIGAGGA-GKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~-g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
.++.+|+|+|+|+|++ |+.++..|.+.|++|++++|+.+...+ .+.++|+||+||+..
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~------------------~l~~aDiVIsat~~~ 98 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKE------------------HTKQADIVIVAVGKP 98 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHH------------------HHhhCCEEEEcCCCC
Confidence 4689999999999996 888999999999999999998643322 234567777777653
No 47
>PRK08618 ornithine cyclodeaminase; Validated
Probab=97.97 E-value=1.4e-05 Score=81.20 Aligned_cols=73 Identities=21% Similarity=0.350 Sum_probs=57.0
Q ss_pred CCcEEEEEccchhHHHHHHHHH-HCCC-eEEEEECCHHHHHHHHHHHCC----cccchhcccccCCCCeeEEEecCCCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAK-AKGA-RVVIANRTYDRARELAETVGG----HALSLADLENFNPEDGMILANTTSIGM 453 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~-~~G~-~v~i~~R~~~~a~~la~~~~~----~~~~~~~l~~~~~~~~DilInaT~~gm 453 (465)
..++++|+|+|++|+..+.++. ..++ +|+|++|++++++++++++.. ....+++..+ .+.++|+||+|||.+.
T Consensus 126 ~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~aDiVi~aT~s~~ 204 (325)
T PRK08618 126 DAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADE-AIEEADIIVTVTNAKT 204 (325)
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHH-HHhcCCEEEEccCCCC
Confidence 4689999999999999988875 4577 899999999999999987642 2223344444 4567999999999773
No 48
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.95 E-value=3.2e-05 Score=70.27 Aligned_cols=70 Identities=36% Similarity=0.413 Sum_probs=46.8
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCC
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~ 451 (465)
..+.+|+++|+|-|..|+.+|++|..+|++|+|+.+++-++-+..-+ +....++ ++ .+..+|++|.+|+-
T Consensus 19 ~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~d-Gf~v~~~---~~-a~~~adi~vtaTG~ 88 (162)
T PF00670_consen 19 LMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAAMD-GFEVMTL---EE-ALRDADIFVTATGN 88 (162)
T ss_dssp S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHT-T-EEE-H---HH-HTTT-SEEEE-SSS
T ss_pred eeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhc-CcEecCH---HH-HHhhCCEEEECCCC
Confidence 56889999999999999999999999999999999999876554321 2222233 33 34578999999975
No 49
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.93 E-value=2.8e-05 Score=78.58 Aligned_cols=80 Identities=31% Similarity=0.412 Sum_probs=62.6
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc---------ccchhccc---c----c--
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH---------ALSLADLE---N----F-- 437 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~---------~~~~~~l~---~----~-- 437 (465)
.++.++.++|+|+ +|+|+++++.|+.+|++|++..|+.+++++.++++... ..|+.++. . +
T Consensus 31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~ 110 (314)
T KOG1208|consen 31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK 110 (314)
T ss_pred ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 4567899999999 59999999999999999999999999999998888531 12332221 1 1
Q ss_pred CCCCeeEEEecCCCCCCCC
Q 012352 438 NPEDGMILANTTSIGMQPK 456 (465)
Q Consensus 438 ~~~~~DilInaT~~gm~~~ 456 (465)
.....|++||++|+...+.
T Consensus 111 ~~~~ldvLInNAGV~~~~~ 129 (314)
T KOG1208|consen 111 KEGPLDVLINNAGVMAPPF 129 (314)
T ss_pred cCCCccEEEeCcccccCCc
Confidence 3567899999999987654
No 50
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=97.88 E-value=4.8e-05 Score=75.37 Aligned_cols=77 Identities=35% Similarity=0.437 Sum_probs=60.1
Q ss_pred cccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC------cc----cchh---cc--------
Q 012352 377 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG------HA----LSLA---DL-------- 434 (465)
Q Consensus 377 ~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~------~~----~~~~---~l-------- 434 (465)
..+.+|.++|+|++ |+|+++|..|+++|++|+|++|+.++.++.+.++.. +. .++. +.
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~ 83 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV 83 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence 45789999999997 999999999999999999999999998888776531 11 1221 11
Q ss_pred cccCCCCeeEEEecCCCCCC
Q 012352 435 ENFNPEDGMILANTTSIGMQ 454 (465)
Q Consensus 435 ~~~~~~~~DilInaT~~gm~ 454 (465)
.+ ..++.|++||+++....
T Consensus 84 ~~-~~GkidiLvnnag~~~~ 102 (270)
T KOG0725|consen 84 EK-FFGKIDILVNNAGALGL 102 (270)
T ss_pred HH-hCCCCCEEEEcCCcCCC
Confidence 11 25789999999988764
No 51
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.87 E-value=3e-05 Score=80.21 Aligned_cols=72 Identities=26% Similarity=0.345 Sum_probs=57.7
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhcccccCCCCeeEEEecCCC
Q 012352 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 379 l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~l~~~~~~~~DilInaT~~ 451 (465)
+.+++|+|+|+|.+|+.++..+..+|++|++++|++++.+.+...++... .+.+++.+ .+.++|+||||+++
T Consensus 165 l~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~-~l~~aDvVI~a~~~ 240 (370)
T TIGR00518 165 VEPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIED-AVKRADLLIGAVLI 240 (370)
T ss_pred CCCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHH-HHccCCEEEEcccc
Confidence 45678999999999999999999999999999999999888887776421 12233444 45679999999865
No 52
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.86 E-value=6e-05 Score=75.28 Aligned_cols=77 Identities=27% Similarity=0.411 Sum_probs=59.5
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc--c----cchhc---cccc------CCC
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH--A----LSLAD---LENF------NPE 440 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~--~----~~~~~---l~~~------~~~ 440 (465)
.++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++.. . .|+.+ +.+. ..+
T Consensus 5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4577899999998 59999999999999999999999999999998887521 1 22221 1110 246
Q ss_pred CeeEEEecCCCCC
Q 012352 441 DGMILANTTSIGM 453 (465)
Q Consensus 441 ~~DilInaT~~gm 453 (465)
..|+|||+++...
T Consensus 85 ~id~vI~nAG~~~ 97 (296)
T PRK05872 85 GIDVVVANAGIAS 97 (296)
T ss_pred CCCEEEECCCcCC
Confidence 7899999998754
No 53
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=97.86 E-value=3.3e-05 Score=71.62 Aligned_cols=74 Identities=30% Similarity=0.408 Sum_probs=59.6
Q ss_pred cCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--cc----cch----------hcccccCCCC
Q 012352 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA----LSL----------ADLENFNPED 441 (465)
Q Consensus 379 l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~--~~----~~~----------~~l~~~~~~~ 441 (465)
+..|.++|.|+| |+|||++..|+..|++|.+++++.+.|++.+..+++ .+ .|+ ++... .++.
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k-~~g~ 90 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEK-SLGT 90 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHH-hcCC
Confidence 456889999998 999999999999999999999999999999999875 22 122 11122 4678
Q ss_pred eeEEEecCCCCC
Q 012352 442 GMILANTTSIGM 453 (465)
Q Consensus 442 ~DilInaT~~gm 453 (465)
.+++|||+++--
T Consensus 91 psvlVncAGItr 102 (256)
T KOG1200|consen 91 PSVLVNCAGITR 102 (256)
T ss_pred CcEEEEcCcccc
Confidence 999999999863
No 54
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.85 E-value=3.9e-05 Score=71.79 Aligned_cols=76 Identities=24% Similarity=0.311 Sum_probs=58.0
Q ss_pred cCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cccchhccc------cc---CCCCeeEE
Q 012352 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HALSLADLE------NF---NPEDGMIL 445 (465)
Q Consensus 379 l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~~~~~~l~------~~---~~~~~Dil 445 (465)
+.|.++||+|+| |+|++.+..|.++|-+|+|++|++++.++..+.... .+.|+.|.. ++ .....++|
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl 82 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL 82 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence 457899999887 999999999999999999999999998887665542 223332211 11 34578999
Q ss_pred EecCCCCCC
Q 012352 446 ANTTSIGMQ 454 (465)
Q Consensus 446 InaT~~gm~ 454 (465)
||++|+.-.
T Consensus 83 iNNAGIqr~ 91 (245)
T COG3967 83 INNAGIQRN 91 (245)
T ss_pred eecccccch
Confidence 999998743
No 55
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.85 E-value=6.8e-05 Score=75.63 Aligned_cols=78 Identities=26% Similarity=0.352 Sum_probs=58.1
Q ss_pred cccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC----C-cc----cchhc---cccc------
Q 012352 377 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVG----G-HA----LSLAD---LENF------ 437 (465)
Q Consensus 377 ~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~----~-~~----~~~~~---l~~~------ 437 (465)
.++++|+++|+|++ |+|++++..|++.|++|+++.|+.++++++.+++. . .. .|+.+ +.++
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~ 89 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA 89 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 45789999999985 99999999999999999999999998888776652 1 11 13222 1110
Q ss_pred CCCCeeEEEecCCCCCC
Q 012352 438 NPEDGMILANTTSIGMQ 454 (465)
Q Consensus 438 ~~~~~DilInaT~~gm~ 454 (465)
..+..|+|||+++....
T Consensus 90 ~~~~iD~li~nAG~~~~ 106 (313)
T PRK05854 90 EGRPIHLLINNAGVMTP 106 (313)
T ss_pred hCCCccEEEECCccccC
Confidence 34578999999987643
No 56
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.83 E-value=8.3e-05 Score=72.89 Aligned_cols=76 Identities=24% Similarity=0.252 Sum_probs=56.7
Q ss_pred ccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC----Ccc----cchhc---cccc-----CCC
Q 012352 378 ALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVG----GHA----LSLAD---LENF-----NPE 440 (465)
Q Consensus 378 ~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~----~~~----~~~~~---l~~~-----~~~ 440 (465)
++++|+++|+|++ |+|++++..|+++|++|++++|+.++++++++++. ... .|+.+ +..+ ..+
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g 84 (263)
T PRK08339 5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIG 84 (263)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence 4678999999985 99999999999999999999999999888877652 111 12211 1110 235
Q ss_pred CeeEEEecCCCCC
Q 012352 441 DGMILANTTSIGM 453 (465)
Q Consensus 441 ~~DilInaT~~gm 453 (465)
..|++||+++...
T Consensus 85 ~iD~lv~nag~~~ 97 (263)
T PRK08339 85 EPDIFFFSTGGPK 97 (263)
T ss_pred CCcEEEECCCCCC
Confidence 6899999998643
No 57
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.78 E-value=8e-05 Score=71.63 Aligned_cols=74 Identities=12% Similarity=0.245 Sum_probs=55.5
Q ss_pred cCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH---CCcc----cch---hccccc------CCC-
Q 012352 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA----LSL---ADLENF------NPE- 440 (465)
Q Consensus 379 l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~---~~~~----~~~---~~l~~~------~~~- 440 (465)
+++|.++|+|++ |+|++++..|++.|++|++++|+.++.+++.+++ +... .+. +++.++ ..+
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 568999999997 9999999999999999999999999988887665 2221 121 111110 345
Q ss_pred CeeEEEecCCCC
Q 012352 441 DGMILANTTSIG 452 (465)
Q Consensus 441 ~~DilInaT~~g 452 (465)
..|++||+++..
T Consensus 83 ~iD~li~nag~~ 94 (227)
T PRK08862 83 APDVLVNNWTSS 94 (227)
T ss_pred CCCEEEECCccC
Confidence 799999999743
No 58
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.78 E-value=3.5e-05 Score=70.23 Aligned_cols=77 Identities=23% Similarity=0.297 Sum_probs=61.0
Q ss_pred ccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-------chhccccc--CCCCeeEEEe
Q 012352 378 ALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-------SLADLENF--NPEDGMILAN 447 (465)
Q Consensus 378 ~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~-------~~~~l~~~--~~~~~DilIn 447 (465)
.+.|+.++++|+| |+|++++..|+..|++|+-+.|+++...+|.++...... .|+.+.+. .....|.+||
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVN 83 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVN 83 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhc
Confidence 4678999999999 999999999999999999999999999999987654322 23333221 2346899999
Q ss_pred cCCCCCC
Q 012352 448 TTSIGMQ 454 (465)
Q Consensus 448 aT~~gm~ 454 (465)
++++...
T Consensus 84 NAgvA~~ 90 (245)
T KOG1207|consen 84 NAGVATN 90 (245)
T ss_pred cchhhhc
Confidence 9988653
No 59
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.77 E-value=9.3e-05 Score=71.74 Aligned_cols=76 Identities=30% Similarity=0.421 Sum_probs=57.2
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---c-------cccC
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---L-------ENFN 438 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---l-------~~~~ 438 (465)
.++++|+++|+|+ |++|++++..|++.|++|++.+|+.++.+++.+.+.. .. .++.+ + .+ .
T Consensus 6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~ 84 (255)
T PRK07523 6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA-E 84 (255)
T ss_pred cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH-h
Confidence 3477899999998 6999999999999999999999999888877766532 11 12211 1 11 3
Q ss_pred CCCeeEEEecCCCCC
Q 012352 439 PEDGMILANTTSIGM 453 (465)
Q Consensus 439 ~~~~DilInaT~~gm 453 (465)
.+..|+|||+++...
T Consensus 85 ~~~~d~li~~ag~~~ 99 (255)
T PRK07523 85 IGPIDILVNNAGMQF 99 (255)
T ss_pred cCCCCEEEECCCCCC
Confidence 456899999988754
No 60
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.74 E-value=9.4e-05 Score=75.37 Aligned_cols=77 Identities=26% Similarity=0.390 Sum_probs=58.2
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCC
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPE 440 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---l~~~------~~~ 440 (465)
.+.+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++. ... .|+.+ +.+. ..+
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG 83 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 356899999999 599999999999999999999999999988877652 221 12211 1110 236
Q ss_pred CeeEEEecCCCCCC
Q 012352 441 DGMILANTTSIGMQ 454 (465)
Q Consensus 441 ~~DilInaT~~gm~ 454 (465)
..|++||+++.+..
T Consensus 84 ~iD~lVnnAG~~~~ 97 (330)
T PRK06139 84 RIDVWVNNVGVGAV 97 (330)
T ss_pred CCCEEEECCCcCCC
Confidence 78999999987654
No 61
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.73 E-value=8.6e-05 Score=73.26 Aligned_cols=73 Identities=18% Similarity=0.262 Sum_probs=52.3
Q ss_pred cCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEECCHHHH---HHHHHHHCCc-c--cchhc---c-------cccCC
Q 012352 379 LAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTYDRA---RELAETVGGH-A--LSLAD---L-------ENFNP 439 (465)
Q Consensus 379 l~~k~vlV~GaG---g~g~ai~~~L~~~G~~v~i~~R~~~~a---~~la~~~~~~-~--~~~~~---l-------~~~~~ 439 (465)
+++|.+||+|++ |+|++++.+|++.|++|+++.|+.+.. +++.++++.. . .|+.+ + .+ ..
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~-~~ 83 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEK-KW 83 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHH-Hh
Confidence 678999999997 899999999999999999999986433 3344443321 1 22211 1 11 34
Q ss_pred CCeeEEEecCCCC
Q 012352 440 EDGMILANTTSIG 452 (465)
Q Consensus 440 ~~~DilInaT~~g 452 (465)
+..|++||++++.
T Consensus 84 g~iD~lVnnAG~~ 96 (271)
T PRK06505 84 GKLDFVVHAIGFS 96 (271)
T ss_pred CCCCEEEECCccC
Confidence 6799999999875
No 62
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.73 E-value=0.0001 Score=71.83 Aligned_cols=73 Identities=25% Similarity=0.353 Sum_probs=56.9
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchh---cc-------cccCCCCee
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLA---DL-------ENFNPEDGM 443 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~---~l-------~~~~~~~~D 443 (465)
+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.++++... .++. ++ .+ ..+..|
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~g~id 82 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVD-AFGKLD 82 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHH-hcCCCC
Confidence 56899999998 599999999999999999999999999988887765321 1221 11 11 346789
Q ss_pred EEEecCCCC
Q 012352 444 ILANTTSIG 452 (465)
Q Consensus 444 ilInaT~~g 452 (465)
+|||+++..
T Consensus 83 ~li~~ag~~ 91 (263)
T PRK06200 83 CFVGNAGIW 91 (263)
T ss_pred EEEECCCCc
Confidence 999999875
No 63
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.71 E-value=0.00013 Score=72.18 Aligned_cols=75 Identities=17% Similarity=0.209 Sum_probs=56.9
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---c-------cccCCC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---L-------ENFNPE 440 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---l-------~~~~~~ 440 (465)
+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++.. .. .|+.+ + .+ ..+
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g 82 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFR-LLG 82 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-HcC
Confidence 56899999998 5999999999999999999999999888887776632 11 22211 1 11 345
Q ss_pred CeeEEEecCCCCCC
Q 012352 441 DGMILANTTSIGMQ 454 (465)
Q Consensus 441 ~~DilInaT~~gm~ 454 (465)
..|+|||+++.+..
T Consensus 83 ~id~li~nAg~~~~ 96 (275)
T PRK05876 83 HVDVVFSNAGIVVG 96 (275)
T ss_pred CCCEEEECCCcCCC
Confidence 78999999987643
No 64
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.69 E-value=0.00014 Score=71.44 Aligned_cols=73 Identities=18% Similarity=0.261 Sum_probs=50.3
Q ss_pred cCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEECCH---HHHHHHHHHHCCc-c--cchhc---c-------cccCC
Q 012352 379 LAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTY---DRARELAETVGGH-A--LSLAD---L-------ENFNP 439 (465)
Q Consensus 379 l~~k~vlV~GaG---g~g~ai~~~L~~~G~~v~i~~R~~---~~a~~la~~~~~~-~--~~~~~---l-------~~~~~ 439 (465)
+++|.++|+|++ |+|++++..|++.|++|+++.|+. +.++++....+.. . .|+.+ + .+ ..
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~ 82 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGK-VW 82 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHh-hc
Confidence 568999999985 899999999999999999999873 2233333322211 1 12211 1 12 34
Q ss_pred CCeeEEEecCCCC
Q 012352 440 EDGMILANTTSIG 452 (465)
Q Consensus 440 ~~~DilInaT~~g 452 (465)
+..|++||+++++
T Consensus 83 g~iD~linnAg~~ 95 (262)
T PRK07984 83 PKFDGFVHSIGFA 95 (262)
T ss_pred CCCCEEEECCccC
Confidence 6789999999875
No 65
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.69 E-value=6.7e-05 Score=77.46 Aligned_cols=70 Identities=31% Similarity=0.431 Sum_probs=55.0
Q ss_pred cEEEEEccchhHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHCCc--c--cchh---cccccCCCCeeEEEecCCCC
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGH--A--LSLA---DLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G-~~v~i~~R~~~~a~~la~~~~~~--~--~~~~---~l~~~~~~~~DilInaT~~g 452 (465)
+++||+|+|++|+.++..|++.| .+|++++|+.++++++.+....+ + ++.. .+.+ .+.+.|+|||+.|-.
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~-li~~~d~VIn~~p~~ 79 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVA-LIKDFDLVINAAPPF 79 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHH-HHhcCCEEEEeCCch
Confidence 57999999999999999999999 59999999999999987765322 1 2332 2333 456779999999854
No 66
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=97.67 E-value=0.00023 Score=57.88 Aligned_cols=52 Identities=33% Similarity=0.533 Sum_probs=41.6
Q ss_pred HHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEEC
Q 012352 354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANR 412 (465)
Q Consensus 354 ~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R 412 (465)
+.|.+..++...+. .+.++.+++++|+|+|++|+.++..|.+.|. +|++++|
T Consensus 3 ~~~~~~~l~~~~~~-------~~~~~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 3 AAGAVALLKAAGKV-------TNKSLKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred hHHHHHHHHHHHHH-------hCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 56677777765431 1245788999999999999999999999865 9999999
No 67
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.66 E-value=0.00014 Score=71.88 Aligned_cols=73 Identities=14% Similarity=0.280 Sum_probs=53.2
Q ss_pred cCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEECCH---HHHHHHHHHHCCc-c--cchhc---c-------cccCC
Q 012352 379 LAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTY---DRARELAETVGGH-A--LSLAD---L-------ENFNP 439 (465)
Q Consensus 379 l~~k~vlV~Ga---Gg~g~ai~~~L~~~G~~v~i~~R~~---~~a~~la~~~~~~-~--~~~~~---l-------~~~~~ 439 (465)
+++|.++|+|+ +|+|++++..|++.|++|+++.|+. ++.+++.++++.. . .|+.+ + .+ ..
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~-~~ 81 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKK-DL 81 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHH-Hc
Confidence 46899999998 4999999999999999999999985 3455555555432 1 22221 1 11 34
Q ss_pred CCeeEEEecCCCC
Q 012352 440 EDGMILANTTSIG 452 (465)
Q Consensus 440 ~~~DilInaT~~g 452 (465)
+..|++||++++.
T Consensus 82 g~iDilVnnAG~~ 94 (274)
T PRK08415 82 GKIDFIVHSVAFA 94 (274)
T ss_pred CCCCEEEECCccC
Confidence 6789999999875
No 68
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.66 E-value=0.00013 Score=71.23 Aligned_cols=74 Identities=32% Similarity=0.364 Sum_probs=56.9
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCeeE
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMI 444 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---l~~~------~~~~~Di 444 (465)
+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.++++... .|+.+ +.+. ..+..|+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 56899999998 699999999999999999999999998888888775321 22211 1110 2457899
Q ss_pred EEecCCCC
Q 012352 445 LANTTSIG 452 (465)
Q Consensus 445 lInaT~~g 452 (465)
|||+++..
T Consensus 84 lv~~ag~~ 91 (261)
T PRK08265 84 LVNLACTY 91 (261)
T ss_pred EEECCCCC
Confidence 99998764
No 69
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.66 E-value=0.00013 Score=70.60 Aligned_cols=75 Identities=29% Similarity=0.387 Sum_probs=57.3
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchh---cc-------cccCC
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLA---DL-------ENFNP 439 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~---~l-------~~~~~ 439 (465)
.+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++. ... .++. ++ .+ ..
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~ 84 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTA-EL 84 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH-Hh
Confidence 467899999998 599999999999999999999999999888887763 111 1221 11 11 24
Q ss_pred CCeeEEEecCCCCC
Q 012352 440 EDGMILANTTSIGM 453 (465)
Q Consensus 440 ~~~DilInaT~~gm 453 (465)
+..|+|||+++...
T Consensus 85 g~id~lv~~ag~~~ 98 (253)
T PRK05867 85 GGIDIAVCNAGIIT 98 (253)
T ss_pred CCCCEEEECCCCCC
Confidence 67899999998653
No 70
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.65 E-value=0.00013 Score=71.18 Aligned_cols=73 Identities=23% Similarity=0.277 Sum_probs=55.5
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---c-------cccCCCCee
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---L-------ENFNPEDGM 443 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---l-------~~~~~~~~D 443 (465)
+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+..+... .++.+ + .+ ..+..|
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~g~id 81 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVA-AFGKID 81 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHH-HhCCCC
Confidence 56899999998 599999999999999999999999998888876554321 12211 1 11 246789
Q ss_pred EEEecCCCC
Q 012352 444 ILANTTSIG 452 (465)
Q Consensus 444 ilInaT~~g 452 (465)
+|||+++..
T Consensus 82 ~li~~Ag~~ 90 (262)
T TIGR03325 82 CLIPNAGIW 90 (262)
T ss_pred EEEECCCCC
Confidence 999999864
No 71
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.00018 Score=70.17 Aligned_cols=75 Identities=27% Similarity=0.318 Sum_probs=56.3
Q ss_pred ccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC----C-cc----cchhc---c-------ccc
Q 012352 378 ALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVG----G-HA----LSLAD---L-------ENF 437 (465)
Q Consensus 378 ~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~----~-~~----~~~~~---l-------~~~ 437 (465)
++++|+++|+|++ |+|++++..|++.|++|++++|+.++.+++.+++. . .. .|+.+ + .+
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~- 83 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA- 83 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH-
Confidence 4678999999995 99999999999999999999999988877766542 1 11 12211 1 11
Q ss_pred CCCCeeEEEecCCCCC
Q 012352 438 NPEDGMILANTTSIGM 453 (465)
Q Consensus 438 ~~~~~DilInaT~~gm 453 (465)
..+..|+|||+++...
T Consensus 84 ~~g~id~li~~Ag~~~ 99 (265)
T PRK07062 84 RFGGVDMLVNNAGQGR 99 (265)
T ss_pred hcCCCCEEEECCCCCC
Confidence 3467899999998753
No 72
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.64 E-value=0.00017 Score=70.39 Aligned_cols=75 Identities=21% Similarity=0.204 Sum_probs=53.8
Q ss_pred cccCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEECCHHH---HHHHHHHHCCc-c--cch---hcc-------ccc
Q 012352 377 SALAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTYDR---ARELAETVGGH-A--LSL---ADL-------ENF 437 (465)
Q Consensus 377 ~~l~~k~vlV~GaG---g~g~ai~~~L~~~G~~v~i~~R~~~~---a~~la~~~~~~-~--~~~---~~l-------~~~ 437 (465)
.++++|.++|+|++ |+|++++..|++.|++|++++|+.+. .++++++++.. . .|+ +++ .+
T Consensus 6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~- 84 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAE- 84 (258)
T ss_pred cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHH-
Confidence 45789999999975 89999999999999999999998543 45555555421 1 122 111 11
Q ss_pred CCCCeeEEEecCCCC
Q 012352 438 NPEDGMILANTTSIG 452 (465)
Q Consensus 438 ~~~~~DilInaT~~g 452 (465)
..+..|++||+++..
T Consensus 85 ~~g~ld~lv~nAg~~ 99 (258)
T PRK07533 85 EWGRLDFLLHSIAFA 99 (258)
T ss_pred HcCCCCEEEEcCccC
Confidence 346789999999764
No 73
>PRK06196 oxidoreductase; Provisional
Probab=97.64 E-value=0.0002 Score=72.06 Aligned_cols=76 Identities=32% Similarity=0.434 Sum_probs=57.1
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-cc--cchhc---cccc------CCCCeeE
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA--LSLAD---LENF------NPEDGMI 444 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~~--~~~~~---l~~~------~~~~~Di 444 (465)
++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++.. .. .++.+ +.++ ..+..|+
T Consensus 23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence 467899999999 5999999999999999999999999988887766532 11 22221 1110 2457899
Q ss_pred EEecCCCCC
Q 012352 445 LANTTSIGM 453 (465)
Q Consensus 445 lInaT~~gm 453 (465)
|||+++...
T Consensus 103 li~nAg~~~ 111 (315)
T PRK06196 103 LINNAGVMA 111 (315)
T ss_pred EEECCCCCC
Confidence 999998753
No 74
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.64 E-value=0.00046 Score=69.04 Aligned_cols=135 Identities=18% Similarity=0.219 Sum_probs=86.4
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHH--hhhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v--~~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+.++++|++.....+.- +++.+.++.+ .++.+.|+.|.+|.-..+ ...++.+++ -+.+...+..- -|
T Consensus 55 ~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p-~KDVDGl~~~N----~g 129 (301)
T PRK14194 55 ILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPSVNGILLQLPLPAHIDEARVLQAINP-LKDVDGFHSEN----VG 129 (301)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhccCc-hhccCccChhh----hh
Confidence 567899999987666643 2577777777 577899999999964211 111111111 11222222210 01
Q ss_pred eE-EEE----eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHH
Q 012352 346 KL-FGY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARE 419 (465)
Q Consensus 346 ~l-~G~----NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~ 419 (465)
++ .|. -.--.|++.-|+.. +.++.||+|.|+|.| -+|+.++..|.+.|+.|++++|+....++
T Consensus 130 ~l~~~~~~~~PcTp~aii~lL~~~-----------~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e 198 (301)
T PRK14194 130 GLSQGRDVLTPCTPSGCLRLLEDT-----------CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKA 198 (301)
T ss_pred HHhcCCCCCCCCcHHHHHHHHHHh-----------CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHH
Confidence 12 111 11246677766653 267899999999997 79999999999999999999887665555
Q ss_pred HHHH
Q 012352 420 LAET 423 (465)
Q Consensus 420 la~~ 423 (465)
++++
T Consensus 199 ~~~~ 202 (301)
T PRK14194 199 LCRQ 202 (301)
T ss_pred HHhc
Confidence 5543
No 75
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.64 E-value=0.00058 Score=67.80 Aligned_cols=133 Identities=18% Similarity=0.246 Sum_probs=83.7
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHH--hhhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v--~~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+.++++|++.....++. +++.+.++.+ .+++..|+.|..|.-..+ ...++.+++ .+.+...+..- -|
T Consensus 55 ~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p-~KDVDGl~~~n----~g 129 (285)
T PRK10792 55 RKACEEVGFVSRSYDLPETTSEAELLALIDELNADPTIDGILVQLPLPAHIDNVKVLERIHP-DKDVDGFHPYN----VG 129 (285)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCc-ccccCccChhh----Hh
Confidence 667999999987666643 3577777777 467899999999964321 111211111 11111111110 01
Q ss_pred eE-EE----EeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEEECCHHHHHH
Q 012352 346 KL-FG----YNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYGAKAKGARVVIANRTYDRARE 419 (465)
Q Consensus 346 ~l-~G----~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg-~g~ai~~~L~~~G~~v~i~~R~~~~a~~ 419 (465)
++ .| .-.--.|++..|+.. +.++.||+|+|+|-|. .|+-++..|.+.|+.|+++.+.....++
T Consensus 130 ~l~~~~~~~~PcTp~av~~ll~~~-----------~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~ 198 (285)
T PRK10792 130 RLAQRIPLLRPCTPRGIMTLLERY-----------GIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRH 198 (285)
T ss_pred HHhCCCCCCCCCCHHHHHHHHHHc-----------CCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHH
Confidence 11 11 112246677766653 2578999999999997 9999999999999999999876544444
Q ss_pred HH
Q 012352 420 LA 421 (465)
Q Consensus 420 la 421 (465)
..
T Consensus 199 ~~ 200 (285)
T PRK10792 199 HV 200 (285)
T ss_pred HH
Confidence 33
No 76
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.63 E-value=0.00014 Score=68.95 Aligned_cols=76 Identities=20% Similarity=0.265 Sum_probs=53.4
Q ss_pred CcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHH-HHHHHHHHHCCcccchh--cccccCCCCeeEEEecCC
Q 012352 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD-RARELAETVGGHALSLA--DLENFNPEDGMILANTTS 450 (465)
Q Consensus 374 ~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~-~a~~la~~~~~~~~~~~--~l~~~~~~~~DilInaT~ 450 (465)
|.+.++++|+|+|+|+|.+|...+..|.+.|++|+|++++.. ...++++. + .+.+. ......+.++|+||.||+
T Consensus 3 Pl~l~l~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~-~--~i~~~~~~~~~~~l~~adlViaaT~ 79 (202)
T PRK06718 3 PLMIDLSNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEE-G--KIRWKQKEFEPSDIVDAFLVIAATN 79 (202)
T ss_pred ceEEEcCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhC-C--CEEEEecCCChhhcCCceEEEEcCC
Confidence 445788999999999999999999999999999999998753 33445443 1 11221 111113567888888886
Q ss_pred CC
Q 012352 451 IG 452 (465)
Q Consensus 451 ~g 452 (465)
-.
T Consensus 80 d~ 81 (202)
T PRK06718 80 DP 81 (202)
T ss_pred CH
Confidence 43
No 77
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.62 E-value=0.00019 Score=69.71 Aligned_cols=76 Identities=28% Similarity=0.333 Sum_probs=57.1
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-----cc----cchhc---cccc------C
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HA----LSLAD---LENF------N 438 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~-----~~----~~~~~---l~~~------~ 438 (465)
.+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++.. .. .++.+ +.+. .
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA 83 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 367899999998 5999999999999999999999999998888777632 11 12211 1110 2
Q ss_pred CCCeeEEEecCCCCC
Q 012352 439 PEDGMILANTTSIGM 453 (465)
Q Consensus 439 ~~~~DilInaT~~gm 453 (465)
.+..|+|||+++...
T Consensus 84 ~g~id~li~~ag~~~ 98 (260)
T PRK07063 84 FGPLDVLVNNAGINV 98 (260)
T ss_pred hCCCcEEEECCCcCC
Confidence 457899999998753
No 78
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.61 E-value=0.00015 Score=70.64 Aligned_cols=73 Identities=18% Similarity=0.216 Sum_probs=52.0
Q ss_pred ccCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-c--c--cchh---cc-------cccCC
Q 012352 378 ALAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-H--A--LSLA---DL-------ENFNP 439 (465)
Q Consensus 378 ~l~~k~vlV~GaG---g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~--~--~~~~---~l-------~~~~~ 439 (465)
.+++|+++|+|++ |+|++++.+|++.|++|+++.|+. +.++..+++.. . . .|+. ++ .+ ..
T Consensus 4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~ 81 (252)
T PRK06079 4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKE-RV 81 (252)
T ss_pred ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHH-Hh
Confidence 3678999999985 999999999999999999999984 44444444422 1 1 2221 11 11 34
Q ss_pred CCeeEEEecCCCC
Q 012352 440 EDGMILANTTSIG 452 (465)
Q Consensus 440 ~~~DilInaT~~g 452 (465)
++.|++||+++..
T Consensus 82 g~iD~lv~nAg~~ 94 (252)
T PRK06079 82 GKIDGIVHAIAYA 94 (252)
T ss_pred CCCCEEEEccccc
Confidence 6799999999865
No 79
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.61 E-value=0.00017 Score=71.19 Aligned_cols=75 Identities=19% Similarity=0.273 Sum_probs=54.3
Q ss_pred cccCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEECCH---HHHHHHHHHHCCc-c--cchh---cc-------ccc
Q 012352 377 SALAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTY---DRARELAETVGGH-A--LSLA---DL-------ENF 437 (465)
Q Consensus 377 ~~l~~k~vlV~Ga---Gg~g~ai~~~L~~~G~~v~i~~R~~---~~a~~la~~~~~~-~--~~~~---~l-------~~~ 437 (465)
.-+++|.++|+|+ +|+|++++..|++.|++|++..|+. +++++++++++.. . .|+. ++ .+
T Consensus 6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~- 84 (272)
T PRK08159 6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEK- 84 (272)
T ss_pred ccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHH-
Confidence 3467899999998 5999999999999999999988873 4556666665531 1 2221 11 12
Q ss_pred CCCCeeEEEecCCCC
Q 012352 438 NPEDGMILANTTSIG 452 (465)
Q Consensus 438 ~~~~~DilInaT~~g 452 (465)
..+..|++||++++.
T Consensus 85 ~~g~iD~lv~nAG~~ 99 (272)
T PRK08159 85 KWGKLDFVVHAIGFS 99 (272)
T ss_pred hcCCCcEEEECCccc
Confidence 346799999999875
No 80
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.60 E-value=0.00064 Score=67.51 Aligned_cols=132 Identities=21% Similarity=0.306 Sum_probs=83.7
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHH--hhhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v--~~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+.++++|++.....+.. +++.+.++.+ .++++.|+.|.+|.-..+ ...++.+++ .+.+...+..- -|
T Consensus 60 ~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p-~KDVDGl~~~N----~g 134 (287)
T PRK14176 60 HKACERVGIRAEDQFLPADTTQEELLELIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDP-AKDADGFHPYN----MG 134 (287)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCc-cccccccChhh----hh
Confidence 567999999987666654 2577777777 577899999999965322 111222221 11111111110 01
Q ss_pred eEE-EE----eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEEECCHHHHHH
Q 012352 346 KLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYGAKAKGARVVIANRTYDRARE 419 (465)
Q Consensus 346 ~l~-G~----NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg-~g~ai~~~L~~~G~~v~i~~R~~~~a~~ 419 (465)
+++ |. -.--.|++..|+.. +.++.||+|+|+|-|. .|+-++..|.+.|+.|+++.......++
T Consensus 135 ~l~~g~~~~~PcTp~av~~ll~~~-----------~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~ 203 (287)
T PRK14176 135 KLMIGDEGLVPCTPHGVIRALEEY-----------GVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKK 203 (287)
T ss_pred hHhcCCCCCCCCcHHHHHHHHHHc-----------CCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHH
Confidence 111 11 11246677767653 2678999999999997 9999999999999999999865444333
Q ss_pred H
Q 012352 420 L 420 (465)
Q Consensus 420 l 420 (465)
.
T Consensus 204 ~ 204 (287)
T PRK14176 204 Y 204 (287)
T ss_pred H
Confidence 3
No 81
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.59 E-value=0.00032 Score=68.75 Aligned_cols=74 Identities=31% Similarity=0.371 Sum_probs=56.8
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC-Ccc--cchhc----------ccccCCCCeeE
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-GHA--LSLAD----------LENFNPEDGMI 444 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~-~~~--~~~~~----------l~~~~~~~~Di 444 (465)
+++++++|+|+ ||+|++++..|++.|++|+++.|+.++.+++.+.++ ... .|+.+ +.+ ..+..|+
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~ 81 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEA-DLGPIDV 81 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHH-HcCCCCE
Confidence 46789999998 599999999999999999999999999888877665 211 23221 111 2357899
Q ss_pred EEecCCCCC
Q 012352 445 LANTTSIGM 453 (465)
Q Consensus 445 lInaT~~gm 453 (465)
+||+++...
T Consensus 82 li~~ag~~~ 90 (273)
T PRK07825 82 LVNNAGVMP 90 (273)
T ss_pred EEECCCcCC
Confidence 999998764
No 82
>PRK06720 hypothetical protein; Provisional
Probab=97.59 E-value=0.00027 Score=65.11 Aligned_cols=77 Identities=25% Similarity=0.387 Sum_probs=56.4
Q ss_pred cccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH---CCcc----cch---hcccc------cCC
Q 012352 377 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA----LSL---ADLEN------FNP 439 (465)
Q Consensus 377 ~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~---~~~~----~~~---~~l~~------~~~ 439 (465)
..+++|.++|+|++ |+|++++..|.+.|++|++++|+.+.++..++++ +... .++ +++.+ ...
T Consensus 12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~ 91 (169)
T PRK06720 12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF 91 (169)
T ss_pred cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 34678999999996 8999999999999999999999988877766655 2211 122 11111 034
Q ss_pred CCeeEEEecCCCCC
Q 012352 440 EDGMILANTTSIGM 453 (465)
Q Consensus 440 ~~~DilInaT~~gm 453 (465)
++.|++||++++..
T Consensus 92 G~iDilVnnAG~~~ 105 (169)
T PRK06720 92 SRIDMLFQNAGLYK 105 (169)
T ss_pred CCCCEEEECCCcCC
Confidence 67999999988654
No 83
>PRK05717 oxidoreductase; Validated
Probab=97.59 E-value=0.00021 Score=69.28 Aligned_cols=76 Identities=26% Similarity=0.364 Sum_probs=57.2
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---c----ccc--CCCCe
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---L----ENF--NPEDG 442 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---l----~~~--~~~~~ 442 (465)
..+++|+++|+|+ |++|++++..|.+.|++|++++|+.++..++.+.++... .++.+ + .+. ..+..
T Consensus 6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5678999999998 699999999999999999999999888888777665321 22211 1 110 23568
Q ss_pred eEEEecCCCC
Q 012352 443 MILANTTSIG 452 (465)
Q Consensus 443 DilInaT~~g 452 (465)
|+|||+++..
T Consensus 86 d~li~~ag~~ 95 (255)
T PRK05717 86 DALVCNAAIA 95 (255)
T ss_pred CEEEECCCcc
Confidence 9999999865
No 84
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.58 E-value=0.00015 Score=72.46 Aligned_cols=78 Identities=29% Similarity=0.394 Sum_probs=58.4
Q ss_pred ccccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Cc--c--cchhc---cccc------C
Q 012352 376 SSALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GH--A--LSLAD---LENF------N 438 (465)
Q Consensus 376 ~~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~--~--~~~~~---l~~~------~ 438 (465)
...+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++. .. . .|+.+ +.+. .
T Consensus 35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 114 (293)
T PRK05866 35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR 114 (293)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 34577899999998 699999999999999999999999999888877652 11 1 12211 1110 2
Q ss_pred CCCeeEEEecCCCCC
Q 012352 439 PEDGMILANTTSIGM 453 (465)
Q Consensus 439 ~~~~DilInaT~~gm 453 (465)
.+..|+|||+++.+.
T Consensus 115 ~g~id~li~~AG~~~ 129 (293)
T PRK05866 115 IGGVDILINNAGRSI 129 (293)
T ss_pred cCCCCEEEECCCCCC
Confidence 457899999998764
No 85
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.57 E-value=9.2e-05 Score=61.04 Aligned_cols=66 Identities=30% Similarity=0.408 Sum_probs=50.5
Q ss_pred EEEEEccchhHHHHHHHHHHCC---CeEEEE-ECCHHHHHHHHHHHCCccc--chhcccccCCCCeeEEEecCCCC
Q 012352 383 LFVVIGAGGAGKALAYGAKAKG---ARVVIA-NRTYDRARELAETVGGHAL--SLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G---~~v~i~-~R~~~~a~~la~~~~~~~~--~~~~l~~~~~~~~DilInaT~~g 452 (465)
++.|+|+|.+|.+++..|.+.| .+|+++ +|+++++++++++++.... +..++ ..++|+||.|.+-.
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~----~~~advvilav~p~ 72 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADDNEEA----AQEADVVILAVKPQ 72 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEEHHHH----HHHTSEEEE-S-GG
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCChHHh----hccCCEEEEEECHH
Confidence 4778899999999999999999 689966 9999999999999875432 22222 23579999988654
No 86
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.57 E-value=0.00016 Score=73.61 Aligned_cols=73 Identities=29% Similarity=0.420 Sum_probs=58.7
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHC-CcccchhcccccCCCCeeEEEecCCCC
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKA-KGA-RVVIANRTYDRARELAETVG-GHALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~-~G~-~v~i~~R~~~~a~~la~~~~-~~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
.++++|+|+|+|| |.+|+.++..|.. .|+ ++++++|+.+++..+++++. ....+ +.+ .+.++|+||.+|+..
T Consensus 151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~---l~~-~l~~aDiVv~~ts~~ 226 (340)
T PRK14982 151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILS---LEE-ALPEADIVVWVASMP 226 (340)
T ss_pred cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHh---HHH-HHccCCEEEECCcCC
Confidence 4688999999999 6899999999975 466 99999999999999998875 22223 333 456789999999875
Q ss_pred C
Q 012352 453 M 453 (465)
Q Consensus 453 m 453 (465)
.
T Consensus 227 ~ 227 (340)
T PRK14982 227 K 227 (340)
T ss_pred c
Confidence 4
No 87
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.56 E-value=0.00046 Score=69.03 Aligned_cols=127 Identities=22% Similarity=0.299 Sum_probs=79.1
Q ss_pred HHHHHHcCCCeeEeccc--c--ccHHHHHHHh-hcCCCCeeEeccCchHHH--hhhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLL--V--DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~--~--~~l~~~~~~l-~~~~~~G~~vT~P~K~~v--~~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
-+.++++|++..-..++ + +++.+.++.+ .++++.|+.|..|+-..+ ...++.+++ .+.+...+.+- -|
T Consensus 54 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p-~KDVDGl~~~n----~g 128 (296)
T PRK14188 54 GKQTKEAGMASFEHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDP-EKDVDGLHVVN----AG 128 (296)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCc-ccccccCChhh----HH
Confidence 56789999997644443 2 3577777777 577899999999964221 111211111 11111111110 01
Q ss_pred eEE-E----EeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEc-cchhHHHHHHHHHHCCCeEEEE-ECCHH
Q 012352 346 KLF-G----YNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIG-AGGAGKALAYGAKAKGARVVIA-NRTYD 415 (465)
Q Consensus 346 ~l~-G----~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~G-aGg~g~ai~~~L~~~G~~v~i~-~R~~~ 415 (465)
++. | .-.--.|++.-|+.. +.+++||+|+|+| +|-+|+.++..|.+.|+.|++| +|+..
T Consensus 129 ~l~~~~~~~~PcTp~ai~~ll~~~-----------~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~ 194 (296)
T PRK14188 129 RLATGETALVPCTPLGCMMLLRRV-----------HGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD 194 (296)
T ss_pred HHhCCCCCCcCCCHHHHHHHHHHh-----------CCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC
Confidence 111 1 011146666666653 2578999999999 6789999999999999999999 58753
No 88
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.56 E-value=0.00048 Score=68.46 Aligned_cols=129 Identities=19% Similarity=0.256 Sum_probs=81.8
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHHh--hhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAV--KCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v~--~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
-+.++++|++.....++- +++.+.++.+ .++++.|+.|..|.-..+- ..++.+++ .+.+...+..- -|
T Consensus 54 ~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p-~KDVDGl~~~n----~g 128 (285)
T PRK14189 54 VKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAP-EKDVDGFHVAN----AG 128 (285)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCc-ccCcccCChhh----hh
Confidence 567999999987666653 3577777777 5678999999999742211 11212211 11122222110 11
Q ss_pred eEE-EE----eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccchh-HHHHHHHHHHCCCeEEEEECCHHHH
Q 012352 346 KLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGA-GKALAYGAKAKGARVVIANRTYDRA 417 (465)
Q Consensus 346 ~l~-G~----NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg~-g~ai~~~L~~~G~~v~i~~R~~~~a 417 (465)
+++ |. -.--.|++.-|+.. +.++.||+|+|+|.|++ |+-++..|.++|+.|+++.+.....
T Consensus 129 ~l~~~~~~~~PcTp~aii~lL~~~-----------~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l 195 (285)
T PRK14189 129 ALMTGQPLFRPCTPYGVMKMLESI-----------GIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDL 195 (285)
T ss_pred HhhCCCCCCcCCCHHHHHHHHHHc-----------CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCH
Confidence 121 11 11246666666653 36789999999999987 9999999999999999997654333
No 89
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.00033 Score=67.14 Aligned_cols=77 Identities=31% Similarity=0.365 Sum_probs=58.3
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---cccc--CCCCeeEEEec
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF--NPEDGMILANT 448 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---l~~~--~~~~~DilIna 448 (465)
.++++++++|+|+ |++|+.++..|++.|++|++++|+.++.+++.+..+... .++.+ +.+. .....|+|||+
T Consensus 5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ 84 (245)
T PRK07060 5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC 84 (245)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence 4567899999998 699999999999999999999999999888887765432 22222 1110 23468999999
Q ss_pred CCCCC
Q 012352 449 TSIGM 453 (465)
Q Consensus 449 T~~gm 453 (465)
++...
T Consensus 85 ag~~~ 89 (245)
T PRK07060 85 AGIAS 89 (245)
T ss_pred CCCCC
Confidence 98754
No 90
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.55 E-value=0.0002 Score=72.25 Aligned_cols=72 Identities=24% Similarity=0.377 Sum_probs=54.9
Q ss_pred cEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcc--------cchhcccccCCCCeeEEEecCCC
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA--------LSLADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~--------~~~~~l~~~~~~~~DilInaT~~ 451 (465)
++|.|+|+|++|+++++.|+..|. +|++++|++++++.++.++.... +...+. + .+.++|+||+|++.
T Consensus 1 ~kI~IIGaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~-~-~l~~aDIVIitag~ 78 (306)
T cd05291 1 RKVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDY-S-DCKDADIVVITAGA 78 (306)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCH-H-HhCCCCEEEEccCC
Confidence 479999999999999999999994 89999999999998888763210 111111 2 34679999999987
Q ss_pred CCCC
Q 012352 452 GMQP 455 (465)
Q Consensus 452 gm~~ 455 (465)
...|
T Consensus 79 ~~~~ 82 (306)
T cd05291 79 PQKP 82 (306)
T ss_pred CCCC
Confidence 6443
No 91
>PRK06194 hypothetical protein; Provisional
Probab=97.55 E-value=0.00029 Score=69.49 Aligned_cols=75 Identities=25% Similarity=0.355 Sum_probs=55.4
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchh---ccccc------CCCC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLA---DLENF------NPED 441 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~---~l~~~------~~~~ 441 (465)
+++|++||+|+ ||+|++++..|.+.|++|++++|+.++.+++.+++. ... .++. ++.+. ..+.
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 56789999998 699999999999999999999999888877776653 111 1221 12110 2356
Q ss_pred eeEEEecCCCCC
Q 012352 442 GMILANTTSIGM 453 (465)
Q Consensus 442 ~DilInaT~~gm 453 (465)
.|+|||+++...
T Consensus 84 id~vi~~Ag~~~ 95 (287)
T PRK06194 84 VHLLFNNAGVGA 95 (287)
T ss_pred CCEEEECCCCCC
Confidence 899999998754
No 92
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=97.54 E-value=0.00031 Score=73.68 Aligned_cols=70 Identities=30% Similarity=0.348 Sum_probs=53.2
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCC
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~ 451 (465)
..+.+++|+|+|.|.+|+.++..|...|++|+++++++.++...+. .+....+++ + .+.++|++|++|+.
T Consensus 208 ~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~-~G~~v~~l~---e-al~~aDVVI~aTG~ 277 (425)
T PRK05476 208 VLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQAAM-DGFRVMTME---E-AAELGDIFVTATGN 277 (425)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh-cCCEecCHH---H-HHhCCCEEEECCCC
Confidence 3468999999999999999999999999999999999988655433 243333333 2 23467888888853
No 93
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.54 E-value=0.0003 Score=68.36 Aligned_cols=76 Identities=25% Similarity=0.346 Sum_probs=51.7
Q ss_pred ccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHH-HHHHHHHHHCCcc----cchh---ccccc------CCCCe
Q 012352 378 ALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYD-RARELAETVGGHA----LSLA---DLENF------NPEDG 442 (465)
Q Consensus 378 ~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~-~a~~la~~~~~~~----~~~~---~l~~~------~~~~~ 442 (465)
++++|+++|+|++ |+|++++..|++.|++|++++|+.. +..+..+..+.+. .|+. ++..+ ..+..
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999999985 9999999999999999999998643 2233333333221 1221 11110 34678
Q ss_pred eEEEecCCCCC
Q 012352 443 MILANTTSIGM 453 (465)
Q Consensus 443 DilInaT~~gm 453 (465)
|++||+++...
T Consensus 85 D~lv~~ag~~~ 95 (251)
T PRK12481 85 DILINNAGIIR 95 (251)
T ss_pred CEEEECCCcCC
Confidence 99999998754
No 94
>PRK08589 short chain dehydrogenase; Validated
Probab=97.54 E-value=0.00028 Score=69.42 Aligned_cols=72 Identities=25% Similarity=0.396 Sum_probs=54.1
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---c-------cccCCC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---L-------ENFNPE 440 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---l-------~~~~~~ 440 (465)
+++|++||+|+ ||+|++++..|++.|++|++++|+ ++.+++++++. ... .|+.+ + .+ ..+
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~g 81 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKE-QFG 81 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHH-HcC
Confidence 56899999999 599999999999999999999999 77777766652 111 12211 1 11 346
Q ss_pred CeeEEEecCCCC
Q 012352 441 DGMILANTTSIG 452 (465)
Q Consensus 441 ~~DilInaT~~g 452 (465)
..|+|||+++..
T Consensus 82 ~id~li~~Ag~~ 93 (272)
T PRK08589 82 RVDVLFNNAGVD 93 (272)
T ss_pred CcCEEEECCCCC
Confidence 789999999875
No 95
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.00032 Score=67.42 Aligned_cols=74 Identities=22% Similarity=0.203 Sum_probs=56.5
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchh---cc-------cccCCCCee
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLA---DL-------ENFNPEDGM 443 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~---~l-------~~~~~~~~D 443 (465)
+.+|+++|+|+ |++|++++..|.+.|++|++++|+.++.+++.++++... .++. ++ .+ ..+..|
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id 82 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAE-AFGRLD 82 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH-HhCCCC
Confidence 46789999998 699999999999999999999999888888877776432 1221 11 11 245789
Q ss_pred EEEecCCCCC
Q 012352 444 ILANTTSIGM 453 (465)
Q Consensus 444 ilInaT~~gm 453 (465)
+|||+++...
T Consensus 83 ~vi~~ag~~~ 92 (249)
T PRK06500 83 AVFINAGVAK 92 (249)
T ss_pred EEEECCCCCC
Confidence 9999997653
No 96
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.52 E-value=0.00034 Score=68.80 Aligned_cols=77 Identities=29% Similarity=0.360 Sum_probs=57.8
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchh---ccccc------CC
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLA---DLENF------NP 439 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~---~l~~~------~~ 439 (465)
.++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++. ... .++. ++... ..
T Consensus 6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDF 85 (278)
T ss_pred eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4577899999998 599999999999999999999999988888877653 111 1221 11110 24
Q ss_pred CCeeEEEecCCCCC
Q 012352 440 EDGMILANTTSIGM 453 (465)
Q Consensus 440 ~~~DilInaT~~gm 453 (465)
+..|+|||+++...
T Consensus 86 g~id~li~~ag~~~ 99 (278)
T PRK08277 86 GPCDILINGAGGNH 99 (278)
T ss_pred CCCCEEEECCCCCC
Confidence 67899999998654
No 97
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=97.52 E-value=0.00023 Score=70.72 Aligned_cols=73 Identities=30% Similarity=0.408 Sum_probs=55.6
Q ss_pred CcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc--------ccch-------hcccc-cCCCCee
Q 012352 381 GKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH--------ALSL-------ADLEN-FNPEDGM 443 (465)
Q Consensus 381 ~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~--------~~~~-------~~l~~-~~~~~~D 443 (465)
++=++|+|++ |+||+-+..|+++|.+|++++||++|.+++++++..+ .+|+ +.+.+ ...-.+-
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~Vg 128 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVG 128 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceE
Confidence 4679999997 9999999999999999999999999999999888532 1233 22222 1123466
Q ss_pred EEEecCCCCC
Q 012352 444 ILANTTSIGM 453 (465)
Q Consensus 444 ilInaT~~gm 453 (465)
+|||+.+...
T Consensus 129 ILVNNvG~~~ 138 (312)
T KOG1014|consen 129 ILVNNVGMSY 138 (312)
T ss_pred EEEecccccC
Confidence 8999977664
No 98
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.00031 Score=71.61 Aligned_cols=76 Identities=24% Similarity=0.344 Sum_probs=57.1
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchh---ccccc------CCC
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLA---DLENF------NPE 440 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~---~l~~~------~~~ 440 (465)
.+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++. ... .|+. ++.+. ..+
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG 84 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence 466899999998 599999999999999999999999998888776652 221 1221 11110 346
Q ss_pred CeeEEEecCCCCC
Q 012352 441 DGMILANTTSIGM 453 (465)
Q Consensus 441 ~~DilInaT~~gm 453 (465)
..|++||+++...
T Consensus 85 ~iD~lInnAg~~~ 97 (334)
T PRK07109 85 PIDTWVNNAMVTV 97 (334)
T ss_pred CCCEEEECCCcCC
Confidence 7899999998764
No 99
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.00031 Score=68.16 Aligned_cols=74 Identities=30% Similarity=0.410 Sum_probs=55.9
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---cccc------CCCCeeEEE
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF------NPEDGMILA 446 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---l~~~------~~~~~DilI 446 (465)
+++|+++|+|+ ||+|++++..|+++|++|+++.|+..+.+++.++++... .++.+ +... ..++.|+||
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 84 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAF 84 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 67899999999 699999999999999999999999988887777664322 12211 1110 235689999
Q ss_pred ecCCCC
Q 012352 447 NTTSIG 452 (465)
Q Consensus 447 naT~~g 452 (465)
|+++..
T Consensus 85 ~~ag~~ 90 (255)
T PRK06057 85 NNAGIS 90 (255)
T ss_pred ECCCcC
Confidence 998764
No 100
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.51 E-value=0.00026 Score=69.23 Aligned_cols=74 Identities=22% Similarity=0.304 Sum_probs=53.9
Q ss_pred ccCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEECC---HHHHHHHHHHHC-Ccc----cchhc---c-------cc
Q 012352 378 ALAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRT---YDRARELAETVG-GHA----LSLAD---L-------EN 436 (465)
Q Consensus 378 ~l~~k~vlV~Ga---Gg~g~ai~~~L~~~G~~v~i~~R~---~~~a~~la~~~~-~~~----~~~~~---l-------~~ 436 (465)
++++|.++|+|+ +|+|+++++.|++.|++|++++|+ .++.+++++++. ... .|+.+ + .+
T Consensus 4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 83 (257)
T PRK08594 4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE 83 (257)
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 467899999997 599999999999999999998764 456677777663 221 22211 1 12
Q ss_pred cCCCCeeEEEecCCCC
Q 012352 437 FNPEDGMILANTTSIG 452 (465)
Q Consensus 437 ~~~~~~DilInaT~~g 452 (465)
..+..|++||+++..
T Consensus 84 -~~g~ld~lv~nag~~ 98 (257)
T PRK08594 84 -EVGVIHGVAHCIAFA 98 (257)
T ss_pred -hCCCccEEEECcccC
Confidence 347799999999764
No 101
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.50 E-value=0.00026 Score=68.02 Aligned_cols=74 Identities=34% Similarity=0.469 Sum_probs=55.0
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC--Cc--c--cchh---ccccc------CCCCe
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG--GH--A--LSLA---DLENF------NPEDG 442 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~--~~--~--~~~~---~l~~~------~~~~~ 442 (465)
+++++++|+|+ |++|++++..|.+.|++|+++.|+.++.+++.+.+. .. . .++. ++... ..+..
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 56789999998 699999999999999999999999998888777654 11 1 1221 11110 23568
Q ss_pred eEEEecCCCC
Q 012352 443 MILANTTSIG 452 (465)
Q Consensus 443 DilInaT~~g 452 (465)
|+||++++..
T Consensus 83 d~vi~~ag~~ 92 (251)
T PRK07231 83 DILVNNAGTT 92 (251)
T ss_pred CEEEECCCCC
Confidence 9999999764
No 102
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.00029 Score=68.21 Aligned_cols=74 Identities=27% Similarity=0.303 Sum_probs=56.0
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---c-------cccCC
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---L-------ENFNP 439 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---l-------~~~~~ 439 (465)
.+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++. ... .++.+ + .+ ..
T Consensus 3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~ 81 (254)
T PRK07478 3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVE-RF 81 (254)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH-hc
Confidence 356899999998 599999999999999999999999999888877663 111 12211 1 11 24
Q ss_pred CCeeEEEecCCCC
Q 012352 440 EDGMILANTTSIG 452 (465)
Q Consensus 440 ~~~DilInaT~~g 452 (465)
+..|+|||+++..
T Consensus 82 ~~id~li~~ag~~ 94 (254)
T PRK07478 82 GGLDIAFNNAGTL 94 (254)
T ss_pred CCCCEEEECCCCC
Confidence 5789999999864
No 103
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.50 E-value=0.00024 Score=69.30 Aligned_cols=74 Identities=19% Similarity=0.221 Sum_probs=54.2
Q ss_pred cCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEECCH--HHHHHHHHHHCCc--c--cchh---cc-------cccCC
Q 012352 379 LAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTY--DRARELAETVGGH--A--LSLA---DL-------ENFNP 439 (465)
Q Consensus 379 l~~k~vlV~Ga---Gg~g~ai~~~L~~~G~~v~i~~R~~--~~a~~la~~~~~~--~--~~~~---~l-------~~~~~ 439 (465)
+++|+++|+|+ +|+|++++..|++.|++|++++|+. +..++++++++.. . .|+. ++ .+ ..
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~-~~ 83 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVRE-HV 83 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHH-Hc
Confidence 56899999996 5999999999999999999998763 5566777666432 1 2221 11 11 34
Q ss_pred CCeeEEEecCCCCC
Q 012352 440 EDGMILANTTSIGM 453 (465)
Q Consensus 440 ~~~DilInaT~~gm 453 (465)
+..|++||++++..
T Consensus 84 g~iD~li~nAG~~~ 97 (256)
T PRK07889 84 DGLDGVVHSIGFAP 97 (256)
T ss_pred CCCcEEEEcccccc
Confidence 67999999998763
No 104
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.0004 Score=67.17 Aligned_cols=77 Identities=30% Similarity=0.453 Sum_probs=57.4
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Cc--c--cchh---ccccc------CC
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GH--A--LSLA---DLENF------NP 439 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~--~--~~~~---~l~~~------~~ 439 (465)
.++++|+++|+|+ |++|++++..|++.|++|+++.|+.++.+++.+++. .. . .++. ++.+. ..
T Consensus 5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA 84 (258)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 4577899999998 699999999999999999999999999888877652 11 1 1221 11110 23
Q ss_pred CCeeEEEecCCCCC
Q 012352 440 EDGMILANTTSIGM 453 (465)
Q Consensus 440 ~~~DilInaT~~gm 453 (465)
+..|+|||+++...
T Consensus 85 ~~~d~li~~ag~~~ 98 (258)
T PRK06949 85 GTIDILVNNSGVST 98 (258)
T ss_pred CCCCEEEECCCCCC
Confidence 56899999998754
No 105
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.49 E-value=0.00042 Score=67.24 Aligned_cols=73 Identities=37% Similarity=0.405 Sum_probs=56.4
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchh---cc-------cccCCCCee
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLA---DL-------ENFNPEDGM 443 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~---~l-------~~~~~~~~D 443 (465)
+.+|+++|+|+ |++|++++..|++.|++|++++|+.++.+++.++++... .++. ++ .+ ..+..|
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id 82 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVE-RFGGID 82 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH-HcCCCC
Confidence 56789999998 699999999999999999999999999888887765321 1221 11 11 245789
Q ss_pred EEEecCCCC
Q 012352 444 ILANTTSIG 452 (465)
Q Consensus 444 ilInaT~~g 452 (465)
++||+++..
T Consensus 83 ~li~~ag~~ 91 (257)
T PRK07067 83 ILFNNAALF 91 (257)
T ss_pred EEEECCCcC
Confidence 999998865
No 106
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.00027 Score=70.73 Aligned_cols=77 Identities=29% Similarity=0.374 Sum_probs=56.0
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC-----Cc--c--cchhc---ccc----c--
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-----GH--A--LSLAD---LEN----F-- 437 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~-----~~--~--~~~~~---l~~----~-- 437 (465)
.++++|+++|+|+ ||+|++++..|++.|++|+++.|+.+++++..+++. .. . .++.+ +.. .
T Consensus 12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 91 (306)
T PRK06197 12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA 91 (306)
T ss_pred ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 3567899999998 699999999999999999999999988776655442 11 1 12221 111 0
Q ss_pred CCCCeeEEEecCCCCC
Q 012352 438 NPEDGMILANTTSIGM 453 (465)
Q Consensus 438 ~~~~~DilInaT~~gm 453 (465)
..+..|+|||+++...
T Consensus 92 ~~~~iD~li~nAg~~~ 107 (306)
T PRK06197 92 AYPRIDLLINNAGVMY 107 (306)
T ss_pred hCCCCCEEEECCcccc
Confidence 2457899999998753
No 107
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.49 E-value=0.00024 Score=65.84 Aligned_cols=72 Identities=25% Similarity=0.302 Sum_probs=49.2
Q ss_pred ccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCCC
Q 012352 376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 376 ~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
+..+.++++.|+|.|.+|++++..|..+|++|+.++|+....... ...+. .+.++++ .+.++|+|+++.|..
T Consensus 31 ~~~l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~~~~---~~~~l~e-ll~~aDiv~~~~plt 102 (178)
T PF02826_consen 31 GRELRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-DEFGV---EYVSLDE-LLAQADIVSLHLPLT 102 (178)
T ss_dssp BS-STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-HHTTE---EESSHHH-HHHH-SEEEE-SSSS
T ss_pred ccccCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhc-ccccc---eeeehhh-hcchhhhhhhhhccc
Confidence 467899999999999999999999999999999999998765422 12221 2222333 234577888877753
No 108
>PLN02253 xanthoxin dehydrogenase
Probab=97.49 E-value=0.00033 Score=68.91 Aligned_cols=75 Identities=21% Similarity=0.337 Sum_probs=56.3
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--c--c--cchhc---cccc------CCCC
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--H--A--LSLAD---LENF------NPED 441 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~--~--~--~~~~~---l~~~------~~~~ 441 (465)
.+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.++++. . . .|+.+ +.+. ..++
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGT 94 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 467899999998 5999999999999999999999998888888777642 1 1 12211 1110 2357
Q ss_pred eeEEEecCCCC
Q 012352 442 GMILANTTSIG 452 (465)
Q Consensus 442 ~DilInaT~~g 452 (465)
.|+|||+++..
T Consensus 95 id~li~~Ag~~ 105 (280)
T PLN02253 95 LDIMVNNAGLT 105 (280)
T ss_pred CCEEEECCCcC
Confidence 89999999764
No 109
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.49 E-value=0.00033 Score=68.52 Aligned_cols=74 Identities=23% Similarity=0.256 Sum_probs=51.6
Q ss_pred ccCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEECCHH---HHHHHHHHHCCcc---cchhc---c-------cccC
Q 012352 378 ALAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTYD---RARELAETVGGHA---LSLAD---L-------ENFN 438 (465)
Q Consensus 378 ~l~~k~vlV~GaG---g~g~ai~~~L~~~G~~v~i~~R~~~---~a~~la~~~~~~~---~~~~~---l-------~~~~ 438 (465)
.+++|.++|+|++ |+|++++..|++.|++|++..|+.. .++++.++++... .|+.+ + .+ .
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~-~ 83 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKE-K 83 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHH-H
Confidence 3678999999995 7999999999999999999988842 3344444433211 22211 1 11 3
Q ss_pred CCCeeEEEecCCCC
Q 012352 439 PEDGMILANTTSIG 452 (465)
Q Consensus 439 ~~~~DilInaT~~g 452 (465)
.+..|++||+++..
T Consensus 84 ~g~iDilVnnag~~ 97 (260)
T PRK06603 84 WGSFDFLLHGMAFA 97 (260)
T ss_pred cCCccEEEEccccC
Confidence 56799999998764
No 110
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.49 E-value=0.00041 Score=67.15 Aligned_cols=76 Identities=28% Similarity=0.357 Sum_probs=56.7
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---cccc------CC
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NP 439 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---l~~~------~~ 439 (465)
..+++|++||+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.. .. .++.+ +.+. ..
T Consensus 5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI 84 (254)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 3467899999998 5999999999999999999999999988888776631 11 12211 1110 24
Q ss_pred CCeeEEEecCCCC
Q 012352 440 EDGMILANTTSIG 452 (465)
Q Consensus 440 ~~~DilInaT~~g 452 (465)
+..|+|||+++..
T Consensus 85 ~~id~vi~~ag~~ 97 (254)
T PRK08085 85 GPIDVLINNAGIQ 97 (254)
T ss_pred CCCCEEEECCCcC
Confidence 5689999999864
No 111
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.48 E-value=0.00022 Score=69.85 Aligned_cols=74 Identities=15% Similarity=0.251 Sum_probs=50.8
Q ss_pred cCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEECCH---HHHHHHHHHHCCc-c--cch---hcc-------cccCC
Q 012352 379 LAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTY---DRARELAETVGGH-A--LSL---ADL-------ENFNP 439 (465)
Q Consensus 379 l~~k~vlV~Ga---Gg~g~ai~~~L~~~G~~v~i~~R~~---~~a~~la~~~~~~-~--~~~---~~l-------~~~~~ 439 (465)
+++|.++|+|+ +|+|++++..|++.|++|++..|+. +.++++.++++.. . .|+ +++ .+ ..
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~~ 82 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGK-HW 82 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHH-Hh
Confidence 56899999994 4999999999999999999987653 3334444333321 1 122 111 11 34
Q ss_pred CCeeEEEecCCCCC
Q 012352 440 EDGMILANTTSIGM 453 (465)
Q Consensus 440 ~~~DilInaT~~gm 453 (465)
+..|++||+++++.
T Consensus 83 g~iD~lVnnAG~~~ 96 (261)
T PRK08690 83 DGLDGLVHSIGFAP 96 (261)
T ss_pred CCCcEEEECCccCC
Confidence 67999999998763
No 112
>PRK06182 short chain dehydrogenase; Validated
Probab=97.48 E-value=0.00021 Score=70.17 Aligned_cols=74 Identities=32% Similarity=0.390 Sum_probs=53.5
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---cccc------CCCCeeEEEe
Q 012352 380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF------NPEDGMILAN 447 (465)
Q Consensus 380 ~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---l~~~------~~~~~DilIn 447 (465)
++|+++|+|+ ||+|++++..|.+.|++|+++.|+.++.+++... +... .|+.+ +... ..++.|+|||
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASL-GVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhC-CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3689999998 6999999999999999999999999887776532 2221 12211 1110 2357899999
Q ss_pred cCCCCCC
Q 012352 448 TTSIGMQ 454 (465)
Q Consensus 448 aT~~gm~ 454 (465)
+++.+..
T Consensus 81 ~ag~~~~ 87 (273)
T PRK06182 81 NAGYGSY 87 (273)
T ss_pred CCCcCCC
Confidence 9987643
No 113
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.47 E-value=0.00025 Score=69.09 Aligned_cols=75 Identities=25% Similarity=0.264 Sum_probs=51.3
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cch---hcccccCCCCeeEEEecCC
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSL---ADLENFNPEDGMILANTTS 450 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~---~~l~~~~~~~~DilInaT~ 450 (465)
..+++|+++|+|+ ||+|++++..|++.|++|++++|+............... .++ +++.+ ..++.|++||+++
T Consensus 10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~iDilVnnAG 88 (245)
T PRK12367 10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDK-QLASLDVLILNHG 88 (245)
T ss_pred HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHH-hcCCCCEEEECCc
Confidence 4577899999998 599999999999999999999998632211111111111 122 22333 4567999999998
Q ss_pred CC
Q 012352 451 IG 452 (465)
Q Consensus 451 ~g 452 (465)
.+
T Consensus 89 ~~ 90 (245)
T PRK12367 89 IN 90 (245)
T ss_pred cC
Confidence 75
No 114
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.47 E-value=0.00038 Score=70.27 Aligned_cols=74 Identities=23% Similarity=0.284 Sum_probs=55.6
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---c--c--cchhc---cccc------CCCC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---H--A--LSLAD---LENF------NPED 441 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~--~--~~~~~---l~~~------~~~~ 441 (465)
..+|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++.. . . .++.+ +.++ ....
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 83 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP 83 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 45789999998 6999999999999999999999999999888877631 1 1 12221 1110 2246
Q ss_pred eeEEEecCCCC
Q 012352 442 GMILANTTSIG 452 (465)
Q Consensus 442 ~DilInaT~~g 452 (465)
.|+|||++++.
T Consensus 84 iD~li~nAg~~ 94 (322)
T PRK07453 84 LDALVCNAAVY 94 (322)
T ss_pred ccEEEECCccc
Confidence 89999999864
No 115
>PRK07791 short chain dehydrogenase; Provisional
Probab=97.44 E-value=0.00045 Score=68.66 Aligned_cols=74 Identities=31% Similarity=0.419 Sum_probs=54.5
Q ss_pred cCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCH---------HHHHHHHHHHC---Ccc----cchh---cc----
Q 012352 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTY---------DRARELAETVG---GHA----LSLA---DL---- 434 (465)
Q Consensus 379 l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~---------~~a~~la~~~~---~~~----~~~~---~l---- 434 (465)
+++|+++|+|++ |+|++++..|++.|++|++++|+. ++.+++++++. ... .|+. ++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 568999999985 999999999999999999998875 66777776663 111 1221 11
Q ss_pred ---cccCCCCeeEEEecCCCCC
Q 012352 435 ---ENFNPEDGMILANTTSIGM 453 (465)
Q Consensus 435 ---~~~~~~~~DilInaT~~gm 453 (465)
.+ ..+..|+|||++++..
T Consensus 84 ~~~~~-~~g~id~lv~nAG~~~ 104 (286)
T PRK07791 84 DAAVE-TFGGLDVLVNNAGILR 104 (286)
T ss_pred HHHHH-hcCCCCEEEECCCCCC
Confidence 11 3467899999998753
No 116
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=97.44 E-value=0.00023 Score=71.71 Aligned_cols=45 Identities=24% Similarity=0.298 Sum_probs=38.5
Q ss_pred cccCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Q 012352 377 SALAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTYDRARELAE 422 (465)
Q Consensus 377 ~~l~~k~vlV~Ga---Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~ 422 (465)
.++++|.+||+|+ .|+|++++..|++.|++|++ .|+.++.+++++
T Consensus 5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~ 52 (303)
T PLN02730 5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFET 52 (303)
T ss_pred cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHH
Confidence 5588999999999 69999999999999999988 777666666553
No 117
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.43 E-value=0.00023 Score=72.14 Aligned_cols=45 Identities=27% Similarity=0.564 Sum_probs=41.4
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Q 012352 380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV 424 (465)
Q Consensus 380 ~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~ 424 (465)
.|+.++|+|+ ||+|++++..|++.|++|++++|++++.+++++++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l 97 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSI 97 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
Confidence 5799999998 59999999999999999999999999999887765
No 118
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.43 E-value=0.00032 Score=63.81 Aligned_cols=74 Identities=23% Similarity=0.269 Sum_probs=51.0
Q ss_pred CcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCC
Q 012352 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS 450 (465)
Q Consensus 374 ~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~ 450 (465)
|...++++|+|+|+|+|.+|..-+..|.+.|++|+|++.+ ..+++.+ ++......+.+.+..+.++|+||.+|.
T Consensus 6 P~~l~l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIsp~--~~~~l~~-l~~i~~~~~~~~~~dl~~a~lViaaT~ 79 (157)
T PRK06719 6 PLMFNLHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVSPE--ICKEMKE-LPYITWKQKTFSNDDIKDAHLIYAATN 79 (157)
T ss_pred ceEEEcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCc--cCHHHHh-ccCcEEEecccChhcCCCceEEEECCC
Confidence 4567899999999999999999999999999999999643 3344433 321111111222213567888888875
No 119
>PRK09242 tropinone reductase; Provisional
Probab=97.42 E-value=0.00044 Score=67.08 Aligned_cols=76 Identities=25% Similarity=0.318 Sum_probs=57.6
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC-----Ccc----cchhc----------ccc
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-----GHA----LSLAD----------LEN 436 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~-----~~~----~~~~~----------l~~ 436 (465)
+.+++|+++|+|+ ||+|++++..|.+.|++|++++|+.++.+++.+++. ... .++.+ +.+
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED 84 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 4577899999998 599999999999999999999999998888876652 111 12211 112
Q ss_pred cCCCCeeEEEecCCCCC
Q 012352 437 FNPEDGMILANTTSIGM 453 (465)
Q Consensus 437 ~~~~~~DilInaT~~gm 453 (465)
..+..|+|||+++...
T Consensus 85 -~~g~id~li~~ag~~~ 100 (257)
T PRK09242 85 -HWDGLHILVNNAGGNI 100 (257)
T ss_pred -HcCCCCEEEECCCCCC
Confidence 3467899999998753
No 120
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.41 E-value=0.00035 Score=68.41 Aligned_cols=73 Identities=22% Similarity=0.281 Sum_probs=51.9
Q ss_pred cCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEEC---CHHHHHHHHHHHCCc-c--cchh---cc-------cccCC
Q 012352 379 LAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANR---TYDRARELAETVGGH-A--LSLA---DL-------ENFNP 439 (465)
Q Consensus 379 l~~k~vlV~Ga---Gg~g~ai~~~L~~~G~~v~i~~R---~~~~a~~la~~~~~~-~--~~~~---~l-------~~~~~ 439 (465)
+++|+++|+|+ +|+|++++..|++.|++|++..| +.++.+++.++++.. . .|+. ++ .+ ..
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~~ 82 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQ-HW 82 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHH-Hh
Confidence 56899999994 59999999999999999998864 355666666655421 1 2221 11 11 34
Q ss_pred CCeeEEEecCCCC
Q 012352 440 EDGMILANTTSIG 452 (465)
Q Consensus 440 ~~~DilInaT~~g 452 (465)
+..|++||+++..
T Consensus 83 g~iD~lvnnAG~~ 95 (260)
T PRK06997 83 DGLDGLVHSIGFA 95 (260)
T ss_pred CCCcEEEEccccC
Confidence 6799999999875
No 121
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.00053 Score=67.53 Aligned_cols=73 Identities=27% Similarity=0.340 Sum_probs=54.1
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCeeEEE
Q 012352 381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMILA 446 (465)
Q Consensus 381 ~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---l~~~------~~~~~DilI 446 (465)
+|+++|+|+ ||+|++++..|++.|++|+++.|+.++.+.+.+..+... .++.+ +.+. ..+..|+||
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv 83 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV 83 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 578999998 699999999999999999999999998887766543321 12211 1110 235689999
Q ss_pred ecCCCCC
Q 012352 447 NTTSIGM 453 (465)
Q Consensus 447 naT~~gm 453 (465)
|+++...
T Consensus 84 ~~ag~~~ 90 (277)
T PRK06180 84 NNAGYGH 90 (277)
T ss_pred ECCCccC
Confidence 9998754
No 122
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.41 E-value=0.00025 Score=67.18 Aligned_cols=71 Identities=21% Similarity=0.299 Sum_probs=52.2
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECC-------------------HHHHHHHHHHHCC--ccc-------
Q 012352 379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT-------------------YDRARELAETVGG--HAL------- 429 (465)
Q Consensus 379 l~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~-------------------~~~a~~la~~~~~--~~~------- 429 (465)
+.+++|+|+|+||+|..++..|+..|+ ++++++++ ..|++.+++++.. ..+
T Consensus 19 l~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~ 98 (202)
T TIGR02356 19 LLNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKE 98 (202)
T ss_pred hcCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehh
Confidence 567899999999999999999999998 99999987 3566666666531 011
Q ss_pred --chhcccccCCCCeeEEEecCC
Q 012352 430 --SLADLENFNPEDGMILANTTS 450 (465)
Q Consensus 430 --~~~~l~~~~~~~~DilInaT~ 450 (465)
+.+++.+ .+.++|+||+|+.
T Consensus 99 ~i~~~~~~~-~~~~~D~Vi~~~d 120 (202)
T TIGR02356 99 RVTAENLEL-LINNVDLVLDCTD 120 (202)
T ss_pred cCCHHHHHH-HHhCCCEEEECCC
Confidence 1112222 3567899999974
No 123
>PRK12742 oxidoreductase; Provisional
Probab=97.39 E-value=0.0007 Score=64.60 Aligned_cols=75 Identities=28% Similarity=0.366 Sum_probs=53.8
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHHCCcc--cchhc---cccc--CCCCeeEEEecC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVGGHA--LSLAD---LENF--NPEDGMILANTT 449 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R-~~~~a~~la~~~~~~~--~~~~~---l~~~--~~~~~DilInaT 449 (465)
+++|+++|+|+ ||+|++++..|++.|++|++..| +.++.+++.++++... .++.+ +.+. ..+..|+|||++
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a 83 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA 83 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence 56899999998 69999999999999998877754 6777777777665332 22211 1110 235689999999
Q ss_pred CCCC
Q 012352 450 SIGM 453 (465)
Q Consensus 450 ~~gm 453 (465)
+...
T Consensus 84 g~~~ 87 (237)
T PRK12742 84 GIAV 87 (237)
T ss_pred CCCC
Confidence 8653
No 124
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.00053 Score=67.61 Aligned_cols=73 Identities=22% Similarity=0.283 Sum_probs=53.3
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---cc-------ccCCCCeeEEEe
Q 012352 381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LE-------NFNPEDGMILAN 447 (465)
Q Consensus 381 ~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---l~-------~~~~~~~DilIn 447 (465)
+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+. +... .|+.+ +. +...+..|+|||
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~-~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~ 82 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAE-GLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN 82 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-CceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence 578999998 6999999999999999999999999888777542 2211 22211 11 101246899999
Q ss_pred cCCCCCC
Q 012352 448 TTSIGMQ 454 (465)
Q Consensus 448 aT~~gm~ 454 (465)
+++.+..
T Consensus 83 ~Ag~~~~ 89 (277)
T PRK05993 83 NGAYGQP 89 (277)
T ss_pred CCCcCCC
Confidence 9987754
No 125
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=97.39 E-value=0.00038 Score=67.99 Aligned_cols=73 Identities=23% Similarity=0.236 Sum_probs=48.9
Q ss_pred cCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEECC------HHHHHHHHHHHCC-cc--cchhc---c-------cc
Q 012352 379 LAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRT------YDRARELAETVGG-HA--LSLAD---L-------EN 436 (465)
Q Consensus 379 l~~k~vlV~Ga---Gg~g~ai~~~L~~~G~~v~i~~R~------~~~a~~la~~~~~-~~--~~~~~---l-------~~ 436 (465)
+++|.++|+|+ +|+|+++++.|++.|++|++..|+ .+.++++.+.... .. .|+.+ + .+
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 56899999997 499999999999999999888653 2333334333221 11 22211 1 11
Q ss_pred cCCCCeeEEEecCCCC
Q 012352 437 FNPEDGMILANTTSIG 452 (465)
Q Consensus 437 ~~~~~~DilInaT~~g 452 (465)
..+..|++||+++..
T Consensus 84 -~~g~iD~lv~nag~~ 98 (258)
T PRK07370 84 -KWGKLDILVHCLAFA 98 (258)
T ss_pred -HcCCCCEEEEccccc
Confidence 346799999999865
No 126
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.38 E-value=0.00034 Score=75.71 Aligned_cols=73 Identities=21% Similarity=0.210 Sum_probs=55.4
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--------------cc--cchh---cccccC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--------------HA--LSLA---DLENFN 438 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~--------------~~--~~~~---~l~~~~ 438 (465)
.++|.++|+|+ |++|++++..|++.|++|+++.|+.++++.+.+.+.. .. .++. ++.+ .
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~-a 156 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP-A 156 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH-H
Confidence 45789999998 7999999999999999999999999998877654311 11 1222 2223 4
Q ss_pred CCCeeEEEecCCCC
Q 012352 439 PEDGMILANTTSIG 452 (465)
Q Consensus 439 ~~~~DilInaT~~g 452 (465)
++++|+|||+++..
T Consensus 157 LggiDiVVn~AG~~ 170 (576)
T PLN03209 157 LGNASVVICCIGAS 170 (576)
T ss_pred hcCCCEEEEccccc
Confidence 67899999998765
No 127
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.00055 Score=65.89 Aligned_cols=74 Identities=30% Similarity=0.380 Sum_probs=54.5
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Cc--c--cchhc---ccc----c--CCCC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GH--A--LSLAD---LEN----F--NPED 441 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~--~--~~~~~---l~~----~--~~~~ 441 (465)
+++|+++|+|+ |++|++++..|.+.|++|++++|+.++.+.+.+++. .. . .++.+ +.+ . ..+.
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 56899999998 799999999999999999999999887777766552 11 1 12211 110 0 2356
Q ss_pred eeEEEecCCCC
Q 012352 442 GMILANTTSIG 452 (465)
Q Consensus 442 ~DilInaT~~g 452 (465)
.|+|||+++..
T Consensus 84 id~vi~~ag~~ 94 (250)
T PRK07774 84 IDYLVNNAAIY 94 (250)
T ss_pred CCEEEECCCCc
Confidence 89999999875
No 128
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.37 E-value=0.00046 Score=67.27 Aligned_cols=74 Identities=22% Similarity=0.398 Sum_probs=52.9
Q ss_pred cccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEE-CCHHHHHHHHHHHC----Cc--c--cchhc---c-------cc
Q 012352 377 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIAN-RTYDRARELAETVG----GH--A--LSLAD---L-------EN 436 (465)
Q Consensus 377 ~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~-R~~~~a~~la~~~~----~~--~--~~~~~---l-------~~ 436 (465)
..+++|+++|+|++ |+|++++..|++.|++|+++. |+.++++++++++. .. . .|+.+ + .+
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE 83 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 35778999999995 999999999999999988875 56777776665542 11 1 12211 1 11
Q ss_pred cCCCCeeEEEecCCC
Q 012352 437 FNPEDGMILANTTSI 451 (465)
Q Consensus 437 ~~~~~~DilInaT~~ 451 (465)
..+..|+|||+++.
T Consensus 84 -~~g~id~lv~nAg~ 97 (260)
T PRK08416 84 -DFDRVDFFISNAII 97 (260)
T ss_pred -hcCCccEEEECccc
Confidence 34678999999875
No 129
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.37 E-value=0.00083 Score=64.25 Aligned_cols=76 Identities=29% Similarity=0.427 Sum_probs=56.7
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchh---ccccc------CCCCee
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLA---DLENF------NPEDGM 443 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~---~l~~~------~~~~~D 443 (465)
++++++++|+|+ |++|++++..|.+.|+.|++..|+.++.+++.+.++... .++. ++.+. ..+..|
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVD 82 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 356789999997 699999999999999999999999999888877664321 1221 11110 245789
Q ss_pred EEEecCCCCC
Q 012352 444 ILANTTSIGM 453 (465)
Q Consensus 444 ilInaT~~gm 453 (465)
+|||+++...
T Consensus 83 ~vi~~ag~~~ 92 (245)
T PRK12936 83 ILVNNAGITK 92 (245)
T ss_pred EEEECCCCCC
Confidence 9999998753
No 130
>PRK06484 short chain dehydrogenase; Validated
Probab=97.36 E-value=0.00048 Score=74.11 Aligned_cols=75 Identities=27% Similarity=0.403 Sum_probs=57.9
Q ss_pred ccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchh---ccccc------CCCCee
Q 012352 378 ALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLA---DLENF------NPEDGM 443 (465)
Q Consensus 378 ~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~---~l~~~------~~~~~D 443 (465)
...+|.++|+|++ |+|++++..|++.|++|++++|+.++.+++.++++... .++. ++.++ ..+..|
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 345 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD 345 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 3568999999985 99999999999999999999999999999888776432 2221 11110 346789
Q ss_pred EEEecCCCC
Q 012352 444 ILANTTSIG 452 (465)
Q Consensus 444 ilInaT~~g 452 (465)
+|||+++..
T Consensus 346 ~li~nAg~~ 354 (520)
T PRK06484 346 VLVNNAGIA 354 (520)
T ss_pred EEEECCCCc
Confidence 999999864
No 131
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.00075 Score=65.58 Aligned_cols=75 Identities=31% Similarity=0.357 Sum_probs=55.9
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC----Ccc----cchhc---cccc--CCCCee
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----GHA----LSLAD---LENF--NPEDGM 443 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~----~~~----~~~~~---l~~~--~~~~~D 443 (465)
.+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++. ... .++.+ +.+. ..+..|
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 83 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDID 83 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence 357899999999 599999999999999999999999998888766553 111 12221 1110 346789
Q ss_pred EEEecCCCC
Q 012352 444 ILANTTSIG 452 (465)
Q Consensus 444 ilInaT~~g 452 (465)
++||+++..
T Consensus 84 ~lv~~ag~~ 92 (259)
T PRK06125 84 ILVNNAGAI 92 (259)
T ss_pred EEEECCCCC
Confidence 999998764
No 132
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.00059 Score=65.66 Aligned_cols=73 Identities=23% Similarity=0.321 Sum_probs=54.2
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-----cc----cchhc---c-------cccCCC
Q 012352 381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HA----LSLAD---L-------ENFNPE 440 (465)
Q Consensus 381 ~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~-----~~----~~~~~---l-------~~~~~~ 440 (465)
+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+.. .. .|+.+ + .+ ..+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 80 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRD-ELG 80 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHH-HcC
Confidence 578999987 6999999999999999999999999988877665421 11 12211 1 11 345
Q ss_pred CeeEEEecCCCCCC
Q 012352 441 DGMILANTTSIGMQ 454 (465)
Q Consensus 441 ~~DilInaT~~gm~ 454 (465)
..|++||+++++..
T Consensus 81 ~id~vi~~ag~~~~ 94 (248)
T PRK08251 81 GLDRVIVNAGIGKG 94 (248)
T ss_pred CCCEEEECCCcCCC
Confidence 78999999987643
No 133
>PRK08303 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.00046 Score=69.49 Aligned_cols=73 Identities=33% Similarity=0.453 Sum_probs=52.2
Q ss_pred ccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCH----------HHHHHHHHHH---CCcc----cch---hcc--
Q 012352 378 ALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTY----------DRARELAETV---GGHA----LSL---ADL-- 434 (465)
Q Consensus 378 ~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~----------~~a~~la~~~---~~~~----~~~---~~l-- 434 (465)
.+++|.++|+|++ |+|++++.+|++.|++|++++|+. ++.+++++++ +... .|+ +++
T Consensus 5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~ 84 (305)
T PRK08303 5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA 84 (305)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 4678999999995 999999999999999999999973 4555555544 2211 122 111
Q ss_pred -----cccCCCCeeEEEecC-CC
Q 012352 435 -----ENFNPEDGMILANTT-SI 451 (465)
Q Consensus 435 -----~~~~~~~~DilInaT-~~ 451 (465)
.+ ..+..|++||++ +.
T Consensus 85 ~~~~~~~-~~g~iDilVnnA~g~ 106 (305)
T PRK08303 85 LVERIDR-EQGRLDILVNDIWGG 106 (305)
T ss_pred HHHHHHH-HcCCccEEEECCccc
Confidence 11 346789999998 64
No 134
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.00061 Score=67.28 Aligned_cols=71 Identities=24% Similarity=0.365 Sum_probs=52.1
Q ss_pred CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc-----CCCCeeEE
Q 012352 381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF-----NPEDGMIL 445 (465)
Q Consensus 381 ~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---l~~~-----~~~~~Dil 445 (465)
+|.++|+|+||+|++++..|. .|++|++++|+.++.+++.+++. ... .|+.+ +... ..+..|+|
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l 80 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL 80 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence 478999999999999999996 79999999999988887776653 111 12211 1110 23578999
Q ss_pred EecCCCC
Q 012352 446 ANTTSIG 452 (465)
Q Consensus 446 InaT~~g 452 (465)
||++++.
T Consensus 81 i~nAG~~ 87 (275)
T PRK06940 81 VHTAGVS 87 (275)
T ss_pred EECCCcC
Confidence 9999865
No 135
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.36 E-value=0.0027 Score=63.13 Aligned_cols=131 Identities=19% Similarity=0.252 Sum_probs=82.3
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHH--hhhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v--~~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+.++++|++.....+.- +++.+.++.+ .++.+.|+.|.+|.-..+ ...++.+++ .+.+...+..- -|
T Consensus 53 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p-~KDVDGl~~~n----~g 127 (285)
T PRK14191 53 IKACERVGMDSDLHTLQENTTEAELLSLIKDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDP-NKDVDGFHPLN----IG 127 (285)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCc-cccccccChhh----HH
Confidence 667999999987666653 2577777777 577899999999964211 111222222 11222222110 01
Q ss_pred eE-EEE----eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHH
Q 012352 346 KL-FGY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARE 419 (465)
Q Consensus 346 ~l-~G~----NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~ 419 (465)
++ .|. -.--.|++.-|+.. +.++.||+|+|+|.| -.|+-++..|.+.|+.|+++........+
T Consensus 128 ~l~~g~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~~ 196 (285)
T PRK14191 128 KLCSQLDGFVPATPMGVMRLLKHY-----------HIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLSF 196 (285)
T ss_pred HHhcCCCCCCCCcHHHHHHHHHHh-----------CCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHHH
Confidence 11 111 12245666666653 257899999999999 79999999999999999999654444333
No 136
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.36 E-value=0.00041 Score=65.35 Aligned_cols=74 Identities=23% Similarity=0.248 Sum_probs=58.5
Q ss_pred CCcEEEEEcc--chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cch---h-------cccccCCCCeeEE
Q 012352 380 AGKLFVVIGA--GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSL---A-------DLENFNPEDGMIL 445 (465)
Q Consensus 380 ~~k~vlV~Ga--Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~---~-------~l~~~~~~~~Dil 445 (465)
+.|.|+|+|+ ||+|.+++..+++.|+.|+-+.|..++..+|+.+++-.. .|+ + ++..+..+..|++
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 3588999998 799999999999999999999999999999998887432 122 1 1222245789999
Q ss_pred EecCCCCC
Q 012352 446 ANTTSIGM 453 (465)
Q Consensus 446 InaT~~gm 453 (465)
+|++|..-
T Consensus 86 ~NNAG~~C 93 (289)
T KOG1209|consen 86 YNNAGQSC 93 (289)
T ss_pred EcCCCCCc
Confidence 99998764
No 137
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=97.35 E-value=0.00078 Score=70.50 Aligned_cols=70 Identities=30% Similarity=0.388 Sum_probs=55.0
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCC
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~ 451 (465)
..+.|++|+|+|+|.+|+.++..+...|++|+++++++.++. .+..++...+..+ + .+..+|++|.||+.
T Consensus 198 ~~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~-~A~~~G~~~~~~~---e-~v~~aDVVI~atG~ 267 (413)
T cd00401 198 VMIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICAL-QAAMEGYEVMTME---E-AVKEGDIFVTTTGN 267 (413)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHH-HHHhcCCEEccHH---H-HHcCCCEEEECCCC
Confidence 457899999999999999999999999999999999998865 4555665433332 2 23467999999864
No 138
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=97.34 E-value=0.00035 Score=73.13 Aligned_cols=75 Identities=27% Similarity=0.271 Sum_probs=53.5
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--cc--cchh---cccccCCCCeeEEEecC
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA--LSLA---DLENFNPEDGMILANTT 449 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~--~~--~~~~---~l~~~~~~~~DilInaT 449 (465)
.+++|+++|+|+ ||+|++++..|.+.|++|++++|+.++.++....... .. .++. ++.+ .+++.|++||++
T Consensus 175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~-~l~~IDiLInnA 253 (406)
T PRK07424 175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAE-LLEKVDILIINH 253 (406)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHH-HhCCCCEEEECC
Confidence 467899999998 6999999999999999999999988766443322111 11 1222 2223 356799999999
Q ss_pred CCCC
Q 012352 450 SIGM 453 (465)
Q Consensus 450 ~~gm 453 (465)
+.+.
T Consensus 254 Gi~~ 257 (406)
T PRK07424 254 GINV 257 (406)
T ss_pred CcCC
Confidence 8754
No 139
>PRK06484 short chain dehydrogenase; Validated
Probab=97.34 E-value=0.00048 Score=74.17 Aligned_cols=71 Identities=28% Similarity=0.485 Sum_probs=56.2
Q ss_pred CCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---c-------cccCCCCeeE
Q 012352 380 AGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---L-------ENFNPEDGMI 444 (465)
Q Consensus 380 ~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---l-------~~~~~~~~Di 444 (465)
++|+++|+|++ |+|++++..|+++|++|++++|+.++.+++.++++... .|+.+ + .+ ..+..|+
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~g~iD~ 82 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHR-EFGRIDV 82 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHH-HhCCCCE
Confidence 57899999985 99999999999999999999999999998888875432 22211 1 11 3467899
Q ss_pred EEecCCC
Q 012352 445 LANTTSI 451 (465)
Q Consensus 445 lInaT~~ 451 (465)
|||+++.
T Consensus 83 li~nag~ 89 (520)
T PRK06484 83 LVNNAGV 89 (520)
T ss_pred EEECCCc
Confidence 9999876
No 140
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0008 Score=65.55 Aligned_cols=75 Identities=28% Similarity=0.368 Sum_probs=55.1
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--c--c--cchhc---cccc-----CCCCee
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--H--A--LSLAD---LENF-----NPEDGM 443 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~--~--~--~~~~~---l~~~-----~~~~~D 443 (465)
+++++++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.. . . .|+.+ +.+. ..+..|
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 46789999997 6999999999999999999999999988888776521 1 1 12211 1110 135689
Q ss_pred EEEecCCCCC
Q 012352 444 ILANTTSIGM 453 (465)
Q Consensus 444 ilInaT~~gm 453 (465)
+||++++...
T Consensus 83 ~lv~~ag~~~ 92 (263)
T PRK09072 83 VLINNAGVNH 92 (263)
T ss_pred EEEECCCCCC
Confidence 9999987653
No 141
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.0006 Score=65.96 Aligned_cols=72 Identities=33% Similarity=0.383 Sum_probs=54.5
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchh---cc-------cccCCC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLA---DL-------ENFNPE 440 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~---~l-------~~~~~~ 440 (465)
+.+|+++|+|+ ||+|++++..|+++|++|++++|+.++.+++.+++. ... .++. ++ .+ ..+
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~g 81 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALE-RFG 81 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH-HcC
Confidence 45789999998 599999999999999999999999998888877663 111 1221 11 11 246
Q ss_pred CeeEEEecCCC
Q 012352 441 DGMILANTTSI 451 (465)
Q Consensus 441 ~~DilInaT~~ 451 (465)
..|+|||+++.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 78999999865
No 142
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.32 E-value=0.00088 Score=64.44 Aligned_cols=74 Identities=30% Similarity=0.392 Sum_probs=50.7
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHH-HHHHHHHHHCCcc----cchh---ccc-------ccCCCCe
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-RARELAETVGGHA----LSLA---DLE-------NFNPEDG 442 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~-~a~~la~~~~~~~----~~~~---~l~-------~~~~~~~ 442 (465)
+++|+++|+|+ ||+|++++..|.+.|++|++++|+.. +..+...+.+... .++. ++. + ..+..
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~~ 81 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVE-EFGHI 81 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH-HcCCC
Confidence 67899999998 59999999999999999999999753 2222222333221 1221 111 1 23578
Q ss_pred eEEEecCCCCC
Q 012352 443 MILANTTSIGM 453 (465)
Q Consensus 443 DilInaT~~gm 453 (465)
|+|||+++...
T Consensus 82 d~li~~ag~~~ 92 (248)
T TIGR01832 82 DILVNNAGIIR 92 (248)
T ss_pred CEEEECCCCCC
Confidence 99999998754
No 143
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.31 E-value=0.0011 Score=64.73 Aligned_cols=75 Identities=25% Similarity=0.259 Sum_probs=56.7
Q ss_pred cccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---c-------cccC
Q 012352 377 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---L-------ENFN 438 (465)
Q Consensus 377 ~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---l-------~~~~ 438 (465)
.++.+|+++|+|++ ++|++++..|++.|++|++.+|+.++.+++.+.+. ... .++.+ + .+ .
T Consensus 6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~ 84 (265)
T PRK07097 6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK-E 84 (265)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-h
Confidence 45778999999995 99999999999999999999999988887776652 111 12211 1 11 3
Q ss_pred CCCeeEEEecCCCC
Q 012352 439 PEDGMILANTTSIG 452 (465)
Q Consensus 439 ~~~~DilInaT~~g 452 (465)
.+..|+||++++..
T Consensus 85 ~~~id~li~~ag~~ 98 (265)
T PRK07097 85 VGVIDILVNNAGII 98 (265)
T ss_pred CCCCCEEEECCCCC
Confidence 45689999999875
No 144
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.31 E-value=0.00037 Score=62.70 Aligned_cols=71 Identities=28% Similarity=0.372 Sum_probs=52.9
Q ss_pred cEEEEEccc-hhHHHHHHHHHHCCC-eEEEEECC--HHHHHHHHHHHC---Ccc----cchh---cc-------cccCCC
Q 012352 382 KLFVVIGAG-GAGKALAYGAKAKGA-RVVIANRT--YDRARELAETVG---GHA----LSLA---DL-------ENFNPE 440 (465)
Q Consensus 382 k~vlV~GaG-g~g~ai~~~L~~~G~-~v~i~~R~--~~~a~~la~~~~---~~~----~~~~---~l-------~~~~~~ 440 (465)
|+++|+|++ |+|++++.+|.+.|. +|+++.|+ .++.+++.+++. ... .|+. ++ .+ ..+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIK-RFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHH-HHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccc-ccc
Confidence 689999985 999999999999987 89999999 788888877664 211 1211 11 11 245
Q ss_pred CeeEEEecCCCCC
Q 012352 441 DGMILANTTSIGM 453 (465)
Q Consensus 441 ~~DilInaT~~gm 453 (465)
..|++||+++..-
T Consensus 80 ~ld~li~~ag~~~ 92 (167)
T PF00106_consen 80 PLDILINNAGIFS 92 (167)
T ss_dssp SESEEEEECSCTT
T ss_pred ccccccccccccc
Confidence 7999999998764
No 145
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.00085 Score=64.56 Aligned_cols=74 Identities=34% Similarity=0.481 Sum_probs=55.0
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC--Ccc----cchh---ccccc------CCCCe
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG--GHA----LSLA---DLENF------NPEDG 442 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~--~~~----~~~~---~l~~~------~~~~~ 442 (465)
+++|+++|+|+ |++|++++..|.+.|++|+++.|+.++.++..+.+. ... .++. ++.+. ..+..
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 56899999998 599999999999999999999999988887776652 111 1221 11110 23578
Q ss_pred eEEEecCCCC
Q 012352 443 MILANTTSIG 452 (465)
Q Consensus 443 DilInaT~~g 452 (465)
|+|||+++..
T Consensus 83 d~vi~~ag~~ 92 (252)
T PRK06138 83 DVLVNNAGFG 92 (252)
T ss_pred CEEEECCCCC
Confidence 9999999864
No 146
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.00088 Score=65.41 Aligned_cols=75 Identities=33% Similarity=0.363 Sum_probs=56.4
Q ss_pred ccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Cc--c--cchhc---c-------cccCC
Q 012352 378 ALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GH--A--LSLAD---L-------ENFNP 439 (465)
Q Consensus 378 ~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~--~--~~~~~---l-------~~~~~ 439 (465)
++++++++|+|++ |+|++++..|.++|++|+++.|+.++.+++.+.+. .. . .++.+ + .+ ..
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~ 85 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVE-AF 85 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-Hc
Confidence 4678999999985 89999999999999999999999988888776652 11 1 12211 1 11 24
Q ss_pred CCeeEEEecCCCCC
Q 012352 440 EDGMILANTTSIGM 453 (465)
Q Consensus 440 ~~~DilInaT~~gm 453 (465)
++.|+|||+++...
T Consensus 86 ~~id~vi~~Ag~~~ 99 (263)
T PRK07814 86 GRLDIVVNNVGGTM 99 (263)
T ss_pred CCCCEEEECCCCCC
Confidence 57899999998654
No 147
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.31 E-value=0.0008 Score=65.15 Aligned_cols=76 Identities=30% Similarity=0.393 Sum_probs=56.3
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---cccc------CCC
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPE 440 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---l~~~------~~~ 440 (465)
.+++|++||+|+ |++|++++..|++.|++|++++|++++.+++.+++.. .. .++.+ +.+. ..+
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG 83 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 356899999999 6999999999999999999999999888887776531 11 12221 1110 235
Q ss_pred CeeEEEecCCCCC
Q 012352 441 DGMILANTTSIGM 453 (465)
Q Consensus 441 ~~DilInaT~~gm 453 (465)
..|+||++++...
T Consensus 84 ~~d~vi~~ag~~~ 96 (262)
T PRK13394 84 SVDILVSNAGIQI 96 (262)
T ss_pred CCCEEEECCccCC
Confidence 6899999998754
No 148
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.30 E-value=0.00067 Score=65.99 Aligned_cols=70 Identities=26% Similarity=0.236 Sum_probs=52.2
Q ss_pred EEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--c--c--cchh---ccccc------CCCCeeEEE
Q 012352 383 LFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--H--A--LSLA---DLENF------NPEDGMILA 446 (465)
Q Consensus 383 ~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~--~--~--~~~~---~l~~~------~~~~~DilI 446 (465)
+++|+|++ |+|++++..|++.|++|++++|++++.+++.+++.. . . .|+. ++.++ ..+..|+||
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 68999985 999999999999999999999999988887776631 1 1 1221 11110 346789999
Q ss_pred ecCCCC
Q 012352 447 NTTSIG 452 (465)
Q Consensus 447 naT~~g 452 (465)
|+++..
T Consensus 82 ~naG~~ 87 (259)
T PRK08340 82 WNAGNV 87 (259)
T ss_pred ECCCCC
Confidence 999864
No 149
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.00082 Score=65.43 Aligned_cols=75 Identities=33% Similarity=0.453 Sum_probs=54.4
Q ss_pred ccCCcEEEEEcc-c-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH----CC-cc----cchhc---cccc------
Q 012352 378 ALAGKLFVVIGA-G-GAGKALAYGAKAKGARVVIANRTYDRARELAETV----GG-HA----LSLAD---LENF------ 437 (465)
Q Consensus 378 ~l~~k~vlV~Ga-G-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~----~~-~~----~~~~~---l~~~------ 437 (465)
.+++|+++|+|+ | |+|++++..|++.|++|++.+|+.++.++..+++ +. .. .|+.+ +...
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 356899999997 6 8999999999999999999999988877765544 21 11 12211 1110
Q ss_pred CCCCeeEEEecCCCC
Q 012352 438 NPEDGMILANTTSIG 452 (465)
Q Consensus 438 ~~~~~DilInaT~~g 452 (465)
..+..|+|||+++..
T Consensus 94 ~~g~id~li~~ag~~ 108 (262)
T PRK07831 94 RLGRLDVLVNNAGLG 108 (262)
T ss_pred HcCCCCEEEECCCCC
Confidence 235789999999864
No 150
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.00069 Score=65.42 Aligned_cols=76 Identities=28% Similarity=0.448 Sum_probs=56.2
Q ss_pred cccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Cc--c--cchh---cccc----c--CC
Q 012352 377 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GH--A--LSLA---DLEN----F--NP 439 (465)
Q Consensus 377 ~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~--~--~~~~---~l~~----~--~~ 439 (465)
.++++|+++|+|++ |+|++++..|.+.|++|++++|+.++.+++.+++. .. . .++. ++.. . ..
T Consensus 4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH 83 (252)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45778999999985 99999999999999999999999988888877652 11 1 1221 1111 0 24
Q ss_pred CCeeEEEecCCCC
Q 012352 440 EDGMILANTTSIG 452 (465)
Q Consensus 440 ~~~DilInaT~~g 452 (465)
+..|+|||+++..
T Consensus 84 ~~id~li~~ag~~ 96 (252)
T PRK07035 84 GRLDILVNNAAAN 96 (252)
T ss_pred CCCCEEEECCCcC
Confidence 5689999998753
No 151
>PRK09186 flagellin modification protein A; Provisional
Probab=97.30 E-value=0.00064 Score=65.65 Aligned_cols=46 Identities=33% Similarity=0.444 Sum_probs=41.1
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV 424 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~ 424 (465)
+++|+++|+|+ ||+|++++..|.+.|++|++++|+.++++++++++
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l 48 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESL 48 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHH
Confidence 35789999998 59999999999999999999999999988877665
No 152
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=97.28 E-value=0.00084 Score=67.71 Aligned_cols=72 Identities=24% Similarity=0.317 Sum_probs=54.5
Q ss_pred CcEEEEEccc-hhHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHCC---c--c--cchhc---ccc----c--CCCCe
Q 012352 381 GKLFVVIGAG-GAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGG---H--A--LSLAD---LEN----F--NPEDG 442 (465)
Q Consensus 381 ~k~vlV~GaG-g~g~ai~~~L~~~G-~~v~i~~R~~~~a~~la~~~~~---~--~--~~~~~---l~~----~--~~~~~ 442 (465)
+|+++|+|++ |+|++++..|++.| ++|+++.|+.+++++++++++. . . .|+.+ +.+ . ..+..
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 6799999995 99999999999999 8999999999998888877642 1 1 12211 111 0 24578
Q ss_pred eEEEecCCCC
Q 012352 443 MILANTTSIG 452 (465)
Q Consensus 443 DilInaT~~g 452 (465)
|++||++++.
T Consensus 83 D~lI~nAG~~ 92 (314)
T TIGR01289 83 DALVCNAAVY 92 (314)
T ss_pred CEEEECCCcc
Confidence 9999999864
No 153
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0011 Score=64.39 Aligned_cols=75 Identities=31% Similarity=0.408 Sum_probs=53.5
Q ss_pred cccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHH-HHHHHHHHHC---Ccc----cchh---cc-------ccc
Q 012352 377 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYD-RARELAETVG---GHA----LSLA---DL-------ENF 437 (465)
Q Consensus 377 ~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~-~a~~la~~~~---~~~----~~~~---~l-------~~~ 437 (465)
.++++|+++|+|++ |+|++++..|++.|++|++++|+.+ ..+++.+++. ... .++. ++ .+
T Consensus 4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~- 82 (254)
T PRK06114 4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA- 82 (254)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-
Confidence 35778999999985 9999999999999999999998753 4455555542 111 1221 11 11
Q ss_pred CCCCeeEEEecCCCC
Q 012352 438 NPEDGMILANTTSIG 452 (465)
Q Consensus 438 ~~~~~DilInaT~~g 452 (465)
..+..|+|||+++..
T Consensus 83 ~~g~id~li~~ag~~ 97 (254)
T PRK06114 83 ELGALTLAVNAAGIA 97 (254)
T ss_pred HcCCCCEEEECCCCC
Confidence 346789999999875
No 154
>PRK08643 acetoin reductase; Validated
Probab=97.28 E-value=0.00091 Score=64.73 Aligned_cols=71 Identities=24% Similarity=0.335 Sum_probs=53.3
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---c-------cccCCCCe
Q 012352 381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---L-------ENFNPEDG 442 (465)
Q Consensus 381 ~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---l-------~~~~~~~~ 442 (465)
+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++..++.. .. .++.+ + .+ ..++.
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~~i 80 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVD-TFGDL 80 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HcCCC
Confidence 578999988 5999999999999999999999999888887766531 11 12211 1 11 24578
Q ss_pred eEEEecCCCC
Q 012352 443 MILANTTSIG 452 (465)
Q Consensus 443 DilInaT~~g 452 (465)
|+|||+++..
T Consensus 81 d~vi~~ag~~ 90 (256)
T PRK08643 81 NVVVNNAGVA 90 (256)
T ss_pred CEEEECCCCC
Confidence 9999999764
No 155
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.00057 Score=66.41 Aligned_cols=73 Identities=22% Similarity=0.285 Sum_probs=53.7
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--c--c--cchhc---ccc----c--CCCCeeE
Q 012352 381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--H--A--LSLAD---LEN----F--NPEDGMI 444 (465)
Q Consensus 381 ~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~--~--~--~~~~~---l~~----~--~~~~~Di 444 (465)
+++++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.. . . .|+.+ +.+ . ..+..|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 368999987 6999999999999999999999999998887776532 1 1 12211 111 0 2356899
Q ss_pred EEecCCCCC
Q 012352 445 LANTTSIGM 453 (465)
Q Consensus 445 lInaT~~gm 453 (465)
|||+++...
T Consensus 82 lv~~ag~~~ 90 (257)
T PRK07024 82 VIANAGISV 90 (257)
T ss_pred EEECCCcCC
Confidence 999998653
No 156
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.27 E-value=0.0039 Score=61.81 Aligned_cols=133 Identities=18% Similarity=0.257 Sum_probs=84.3
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHHh--hhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAV--KCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v~--~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+..+++|++.....++- +++.+.++.+ .++.+.|+.|..|.-..+- ..++.+++ .+.+...+..- -|
T Consensus 48 ~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~v~~~I~p-~KDVDGl~~~n----~g 122 (279)
T PRK14178 48 HRACERVGIGSVGIELPGDATTRTVLERIRRLNEDPDINGILVQLPLPKGVDTERVIAAILP-EKDVDGFHPLN----LG 122 (279)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCc-ccCcccCChhh----HH
Confidence 567899999987666654 2577777777 5779999999999643211 11111111 11111111110 01
Q ss_pred eEE-EE----eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHH
Q 012352 346 KLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARE 419 (465)
Q Consensus 346 ~l~-G~----NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~ 419 (465)
+++ |. -.--.|++.-|+.. +.+++||+|+|+|-| -.|+.++..|...|+.|+++.++....++
T Consensus 123 ~l~~~~~~~~PcTp~av~~ll~~~-----------~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~ 191 (279)
T PRK14178 123 RLVSGLPGFAPCTPNGIMTLLHEY-----------KISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKA 191 (279)
T ss_pred HHhCCCCCCCCCCHHHHHHHHHHc-----------CCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHH
Confidence 111 10 11245666666652 267899999999999 79999999999999999999887655444
Q ss_pred HH
Q 012352 420 LA 421 (465)
Q Consensus 420 la 421 (465)
..
T Consensus 192 ~~ 193 (279)
T PRK14178 192 EL 193 (279)
T ss_pred HH
Confidence 33
No 157
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.26 E-value=0.00097 Score=64.74 Aligned_cols=77 Identities=29% Similarity=0.299 Sum_probs=56.0
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Cc--c--cchhc---ccc----c--CC
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GH--A--LSLAD---LEN----F--NP 439 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~--~--~~~~~---l~~----~--~~ 439 (465)
..+++|+++|+|+ |++|++++..|.+.|++|+++.|+.++.+.+.+.+. .. . .++.+ +.. . ..
T Consensus 8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF 87 (259)
T ss_pred hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3467899999997 699999999999999999999999988877766553 11 1 12221 110 0 23
Q ss_pred CCeeEEEecCCCCC
Q 012352 440 EDGMILANTTSIGM 453 (465)
Q Consensus 440 ~~~DilInaT~~gm 453 (465)
+..|+||++++...
T Consensus 88 ~~id~vi~~ag~~~ 101 (259)
T PRK08213 88 GHVDILVNNAGATW 101 (259)
T ss_pred CCCCEEEECCCCCC
Confidence 56899999998643
No 158
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.26 E-value=0.001 Score=63.65 Aligned_cols=75 Identities=27% Similarity=0.359 Sum_probs=54.9
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchh---ccccc------CCCC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLA---DLENF------NPED 441 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~---~l~~~------~~~~ 441 (465)
+++++++|+|+ |++|++++..|++.|++|++++|+.++.+++.+++.. .. .++. ++.+. ..+.
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 56789999998 5999999999999999999999999888777665531 11 1221 11110 2357
Q ss_pred eeEEEecCCCCC
Q 012352 442 GMILANTTSIGM 453 (465)
Q Consensus 442 ~DilInaT~~gm 453 (465)
.|+|||+++...
T Consensus 85 id~vi~~ag~~~ 96 (239)
T PRK07666 85 IDILINNAGISK 96 (239)
T ss_pred ccEEEEcCcccc
Confidence 899999998764
No 159
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.00086 Score=63.97 Aligned_cols=75 Identities=24% Similarity=0.337 Sum_probs=55.4
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC----cc--cchhc---ccc----c--CCCCe
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----HA--LSLAD---LEN----F--NPEDG 442 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~----~~--~~~~~---l~~----~--~~~~~ 442 (465)
+.+++++|+|+ |++|++++..|.+.|++|++++|++++.+++.+.+.. .. .++.+ +.+ . ..+.+
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 45789999998 6899999999999999999999999988888777642 11 12211 111 0 23578
Q ss_pred eEEEecCCCCC
Q 012352 443 MILANTTSIGM 453 (465)
Q Consensus 443 DilInaT~~gm 453 (465)
|+|||+++.+.
T Consensus 84 d~vi~~ag~~~ 94 (237)
T PRK07326 84 DVLIANAGVGH 94 (237)
T ss_pred CEEEECCCCCC
Confidence 99999987654
No 160
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.24 E-value=0.001 Score=64.68 Aligned_cols=76 Identities=24% Similarity=0.312 Sum_probs=53.0
Q ss_pred cccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH---CCcc----cchhc---cccc------CC
Q 012352 377 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA----LSLAD---LENF------NP 439 (465)
Q Consensus 377 ~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~---~~~~----~~~~~---l~~~------~~ 439 (465)
..+++|++||+|++ |+|++++..|++.|++|+++.|+ ++.+++.+.+ +... .++.+ +..+ ..
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF 89 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45788999999995 99999999999999999999998 5555554443 2211 12211 1110 24
Q ss_pred CCeeEEEecCCCCC
Q 012352 440 EDGMILANTTSIGM 453 (465)
Q Consensus 440 ~~~DilInaT~~gm 453 (465)
+..|++||+++...
T Consensus 90 g~id~li~~ag~~~ 103 (258)
T PRK06935 90 GKIDILVNNAGTIR 103 (258)
T ss_pred CCCCEEEECCCCCC
Confidence 57899999998653
No 161
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.00096 Score=64.56 Aligned_cols=72 Identities=26% Similarity=0.390 Sum_probs=52.8
Q ss_pred CcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Cc--c--cchh---cccc----c--CCCCee
Q 012352 381 GKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GH--A--LSLA---DLEN----F--NPEDGM 443 (465)
Q Consensus 381 ~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~--~--~~~~---~l~~----~--~~~~~D 443 (465)
+|+++|+|++ |+|++++..|++.|++|++++|+.++++++.+++. .. . .|+. ++.+ . ..+..|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 4789999985 89999999999999999999999988888776653 11 1 1221 1111 0 245789
Q ss_pred EEEecCCCC
Q 012352 444 ILANTTSIG 452 (465)
Q Consensus 444 ilInaT~~g 452 (465)
+|||+++..
T Consensus 81 ~lI~~ag~~ 89 (252)
T PRK07677 81 ALINNAAGN 89 (252)
T ss_pred EEEECCCCC
Confidence 999998754
No 162
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0013 Score=63.90 Aligned_cols=72 Identities=28% Similarity=0.295 Sum_probs=54.2
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-c--c--cchhc---ccc----c--C-CCCeeEE
Q 012352 382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-H--A--LSLAD---LEN----F--N-PEDGMIL 445 (465)
Q Consensus 382 k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~--~--~~~~~---l~~----~--~-~~~~Dil 445 (465)
|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.++. . . .|+.+ +.+ . . .+..|+|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 67999998 5999999999999999999999999999888877642 1 1 22221 111 0 1 4568999
Q ss_pred EecCCCCC
Q 012352 446 ANTTSIGM 453 (465)
Q Consensus 446 InaT~~gm 453 (465)
||+++...
T Consensus 82 i~~ag~~~ 89 (260)
T PRK08267 82 FNNAGILR 89 (260)
T ss_pred EECCCCCC
Confidence 99998754
No 163
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0012 Score=63.36 Aligned_cols=74 Identities=22% Similarity=0.234 Sum_probs=54.1
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchh---ccccc------CCCCe
Q 012352 380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLA---DLENF------NPEDG 442 (465)
Q Consensus 380 ~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~---~l~~~------~~~~~ 442 (465)
++|+++|+|+ |++|++++..|.+.|++|++++|+.++.+.+.+.+. ... .++. ++... ..+..
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999997 699999999999999999999999988887766542 111 1221 11110 23568
Q ss_pred eEEEecCCCCC
Q 012352 443 MILANTTSIGM 453 (465)
Q Consensus 443 DilInaT~~gm 453 (465)
|+|||+++...
T Consensus 85 d~lv~~ag~~~ 95 (241)
T PRK07454 85 DVLINNAGMAY 95 (241)
T ss_pred CEEEECCCccC
Confidence 99999998754
No 164
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.22 E-value=0.0012 Score=63.83 Aligned_cols=75 Identities=25% Similarity=0.372 Sum_probs=56.3
Q ss_pred cccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Cc--c--cchhc---c-------cccC
Q 012352 377 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GH--A--LSLAD---L-------ENFN 438 (465)
Q Consensus 377 ~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~--~--~~~~~---l-------~~~~ 438 (465)
..+++|+++|+|++ ++|++++..|++.|++|++++|+.++.+++.+++. .. . .++.+ + .. .
T Consensus 7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~ 85 (256)
T PRK06124 7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDA-E 85 (256)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH-h
Confidence 45789999999984 99999999999999999999999988887776552 11 1 12211 1 11 2
Q ss_pred CCCeeEEEecCCCC
Q 012352 439 PEDGMILANTTSIG 452 (465)
Q Consensus 439 ~~~~DilInaT~~g 452 (465)
.+..|+||++++..
T Consensus 86 ~~~id~vi~~ag~~ 99 (256)
T PRK06124 86 HGRLDILVNNVGAR 99 (256)
T ss_pred cCCCCEEEECCCCC
Confidence 45789999998764
No 165
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.0012 Score=63.67 Aligned_cols=73 Identities=25% Similarity=0.304 Sum_probs=52.5
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Cc--c--cchhc---ccccCCCCeeEEEecC
Q 012352 381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GH--A--LSLAD---LENFNPEDGMILANTT 449 (465)
Q Consensus 381 ~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~--~--~~~~~---l~~~~~~~~DilInaT 449 (465)
+|++||+|+ ||+|++++..|++.|++|++..|+.+++.++.+... .. . .++.+ +........|+|||++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 468999998 599999999999999999999999888777765432 11 1 13322 2221123789999999
Q ss_pred CCCC
Q 012352 450 SIGM 453 (465)
Q Consensus 450 ~~gm 453 (465)
+...
T Consensus 82 g~~~ 85 (257)
T PRK09291 82 GIGE 85 (257)
T ss_pred CcCC
Confidence 8653
No 166
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.22 E-value=0.0013 Score=62.94 Aligned_cols=71 Identities=20% Similarity=0.234 Sum_probs=49.6
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchh---cc-------cccCCCCeeEEEe
Q 012352 381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLA---DL-------ENFNPEDGMILAN 447 (465)
Q Consensus 381 ~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~---~l-------~~~~~~~~DilIn 447 (465)
+|+++|+|+ ||+|++++..|++.|++|++.+|+.+...+.....+... .|+. ++ .+ ..+..|++||
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~lv~ 80 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQ-HTDGLRAIIH 80 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHh-hCCCccEEEE
Confidence 478999998 599999999999999999999998765433333333221 1221 11 11 3456899999
Q ss_pred cCCCC
Q 012352 448 TTSIG 452 (465)
Q Consensus 448 aT~~g 452 (465)
+++..
T Consensus 81 ~ag~~ 85 (236)
T PRK06483 81 NASDW 85 (236)
T ss_pred CCccc
Confidence 99864
No 167
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.20 E-value=0.0026 Score=63.14 Aligned_cols=132 Identities=14% Similarity=0.198 Sum_probs=83.4
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHHh--hhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAV--KCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v~--~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
-+.++++|++.....++. +++.+.++.+ .++...|+.|.+|+-..+- ..++.+++ .+.+...+..- -|
T Consensus 53 ~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PlP~~i~~~~i~~~I~p-~KDVDGl~~~n----~g 127 (282)
T PRK14180 53 EKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKP-EKDVDGFHPTN----VG 127 (282)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhhcCc-cccccccChhh----HH
Confidence 567999999987665554 3577777777 5778999999999753221 12222222 11122222110 01
Q ss_pred eE-EEE-----eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHH
Q 012352 346 KL-FGY-----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRAR 418 (465)
Q Consensus 346 ~l-~G~-----NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~ 418 (465)
++ .|. -.--.|++.-|+.. +.+++||+|+|+|-+ =.|+-++..|.+.|+.|+++.+.....+
T Consensus 128 ~l~~g~~~~~~PcTp~aii~lL~~y-----------~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~ 196 (282)
T PRK14180 128 RLQLRDKKCLESCTPKGIMTMLREY-----------GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLK 196 (282)
T ss_pred HHhcCCCCCcCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHH
Confidence 12 221 11246666666653 257899999999998 5999999999999999999976444343
Q ss_pred HH
Q 012352 419 EL 420 (465)
Q Consensus 419 ~l 420 (465)
+.
T Consensus 197 ~~ 198 (282)
T PRK14180 197 SH 198 (282)
T ss_pred HH
Confidence 33
No 168
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.20 E-value=0.0021 Score=63.95 Aligned_cols=124 Identities=22% Similarity=0.336 Sum_probs=78.0
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHH--hhhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v--~~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+.++++|++.....++- +++.+.++.+ .++.+.|+.|..|.-..+ ...++.+++ .+.+...+..- -|
T Consensus 54 ~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivqlPlp~~i~~~~i~~~I~p-~KDVDGl~~~N----~g 128 (284)
T PRK14179 54 ERSALAAGFKSEVVRLPETISQEELLDLIERYNQDPTWHGILVQLPLPKHINEEKILLAIDP-KKDVDGFHPMN----TG 128 (284)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCc-cccccccCHhh----HH
Confidence 578999999987766653 3566777777 577899999999964221 111111111 11111111110 01
Q ss_pred eEE-E----EeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC
Q 012352 346 KLF-G----YNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR 412 (465)
Q Consensus 346 ~l~-G----~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R 412 (465)
+++ | .-.--.|++.-|+.. +.++.||+++|+|. |-+|+-++..|.+.|+.|++|..
T Consensus 129 ~l~~~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s 190 (284)
T PRK14179 129 HLWSGRPVMIPCTPAGIMEMFREY-----------NVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHS 190 (284)
T ss_pred HHhCCCCCCcCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECC
Confidence 111 0 011245666666653 36789999999999 57999999999999999999943
No 169
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0016 Score=63.70 Aligned_cols=76 Identities=20% Similarity=0.258 Sum_probs=54.9
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Cc--c--cchh---ccccc------CCC
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GH--A--LSLA---DLENF------NPE 440 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~--~--~~~~---~l~~~------~~~ 440 (465)
.+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++. .. . .|+. ++... ..+
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFG 85 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 467899999999 599999999999999999999999888777655542 11 1 1221 11110 235
Q ss_pred CeeEEEecCCCCC
Q 012352 441 DGMILANTTSIGM 453 (465)
Q Consensus 441 ~~DilInaT~~gm 453 (465)
..|++||+++...
T Consensus 86 ~iD~vi~~ag~~~ 98 (264)
T PRK07576 86 PIDVLVSGAAGNF 98 (264)
T ss_pred CCCEEEECCCCCC
Confidence 6899999987543
No 170
>PRK06398 aldose dehydrogenase; Validated
Probab=97.18 E-value=0.00055 Score=66.78 Aligned_cols=71 Identities=23% Similarity=0.257 Sum_probs=49.8
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccch---hcc-------cccCCCCeeEEE
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL---ADL-------ENFNPEDGMILA 446 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~---~~l-------~~~~~~~~DilI 446 (465)
++++|+++|+|+ ||+|++++..|++.|++|++++|+..+... +.....|+ +++ .+ ..+..|+||
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~----~~~~~~D~~~~~~i~~~~~~~~~-~~~~id~li 77 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYND----VDYFKVDVSNKEQVIKGIDYVIS-KYGRIDILV 77 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCc----eEEEEccCCCHHHHHHHHHHHHH-HcCCCCEEE
Confidence 467899999998 599999999999999999999998654321 10001122 111 11 346789999
Q ss_pred ecCCCCC
Q 012352 447 NTTSIGM 453 (465)
Q Consensus 447 naT~~gm 453 (465)
|+++...
T Consensus 78 ~~Ag~~~ 84 (258)
T PRK06398 78 NNAGIES 84 (258)
T ss_pred ECCCCCC
Confidence 9998753
No 171
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=97.18 E-value=0.0012 Score=73.71 Aligned_cols=77 Identities=26% Similarity=0.386 Sum_probs=57.1
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC----C-cc----cchh---ccccc------
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----G-HA----LSLA---DLENF------ 437 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~----~-~~----~~~~---~l~~~------ 437 (465)
..+.+|++||+|+ ||+|++++..|.+.|++|++++|+.++++.+.+++. . .. .++. ++.+.
T Consensus 410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~ 489 (676)
T TIGR02632 410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL 489 (676)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 4577899999998 599999999999999999999999988887766553 1 11 1221 11110
Q ss_pred CCCCeeEEEecCCCCC
Q 012352 438 NPEDGMILANTTSIGM 453 (465)
Q Consensus 438 ~~~~~DilInaT~~gm 453 (465)
..++.|+|||+++...
T Consensus 490 ~~g~iDilV~nAG~~~ 505 (676)
T TIGR02632 490 AYGGVDIVVNNAGIAT 505 (676)
T ss_pred hcCCCcEEEECCCCCC
Confidence 3457899999998754
No 172
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.17 E-value=0.0012 Score=63.95 Aligned_cols=74 Identities=26% Similarity=0.287 Sum_probs=53.2
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH---CCc--c--cchhc---c-------cccC
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGH--A--LSLAD---L-------ENFN 438 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~---~~~--~--~~~~~---l-------~~~~ 438 (465)
.++++|+++|+|+ ||+|++++..|++.|++|+++.|+.++. ++.+++ +.. . .++.+ + .+ .
T Consensus 3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~ 80 (258)
T PRK08628 3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVA-K 80 (258)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH-h
Confidence 4578899999998 5999999999999999999999988776 444443 211 1 12211 1 11 2
Q ss_pred CCCeeEEEecCCCC
Q 012352 439 PEDGMILANTTSIG 452 (465)
Q Consensus 439 ~~~~DilInaT~~g 452 (465)
.+..|+|||+++..
T Consensus 81 ~~~id~vi~~ag~~ 94 (258)
T PRK08628 81 FGRIDGLVNNAGVN 94 (258)
T ss_pred cCCCCEEEECCccc
Confidence 35789999999864
No 173
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.17 E-value=0.0015 Score=65.70 Aligned_cols=77 Identities=27% Similarity=0.363 Sum_probs=54.4
Q ss_pred cccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECC-HHHHHHHHHHHC---Ccc----cchh---ccccc-----CC
Q 012352 377 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRT-YDRARELAETVG---GHA----LSLA---DLENF-----NP 439 (465)
Q Consensus 377 ~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~-~~~a~~la~~~~---~~~----~~~~---~l~~~-----~~ 439 (465)
..+++|+++|+|++ |+|++++..|++.|++|++.+|+ .++++++++++. ... .++. ++.+. ..
T Consensus 8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~ 87 (306)
T PRK07792 8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGL 87 (306)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 56889999999985 99999999999999999998874 456666666552 221 1221 11110 13
Q ss_pred CCeeEEEecCCCCC
Q 012352 440 EDGMILANTTSIGM 453 (465)
Q Consensus 440 ~~~DilInaT~~gm 453 (465)
+..|+|||+++...
T Consensus 88 g~iD~li~nAG~~~ 101 (306)
T PRK07792 88 GGLDIVVNNAGITR 101 (306)
T ss_pred CCCCEEEECCCCCC
Confidence 57899999998753
No 174
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.17 E-value=0.0016 Score=62.45 Aligned_cols=76 Identities=37% Similarity=0.411 Sum_probs=55.7
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCC
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPE 440 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---l~~~------~~~ 440 (465)
.+++|+++|+|+ |++|++++..|.+.|++|++++|++++.+.+.+++. ... .++.+ +... ..+
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALG 83 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 356899999998 699999999999999999999999998887776652 111 12211 1110 235
Q ss_pred CeeEEEecCCCCC
Q 012352 441 DGMILANTTSIGM 453 (465)
Q Consensus 441 ~~DilInaT~~gm 453 (465)
..|+|||+++...
T Consensus 84 ~id~vi~~ag~~~ 96 (250)
T PRK12939 84 GLDGLVNNAGITN 96 (250)
T ss_pred CCCEEEECCCCCC
Confidence 7899999998653
No 175
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.17 E-value=0.0017 Score=62.52 Aligned_cols=74 Identities=32% Similarity=0.449 Sum_probs=54.9
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Cc--c--cchhc---c-------cccCCC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GH--A--LSLAD---L-------ENFNPE 440 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~--~--~~~~~---l-------~~~~~~ 440 (465)
+++|+++|+|+ |++|++++..|.+.|++|++++|+.++.+++.+++. .. . .++.+ + .+ ..+
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~ 80 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVE-TFG 80 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH-HcC
Confidence 35789999997 699999999999999999999999998888776652 11 1 12211 1 11 235
Q ss_pred CeeEEEecCCCCC
Q 012352 441 DGMILANTTSIGM 453 (465)
Q Consensus 441 ~~DilInaT~~gm 453 (465)
..|+||++++...
T Consensus 81 ~~d~vi~~a~~~~ 93 (258)
T PRK12429 81 GVDILVNNAGIQH 93 (258)
T ss_pred CCCEEEECCCCCC
Confidence 6899999998654
No 176
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.0014 Score=63.43 Aligned_cols=74 Identities=27% Similarity=0.337 Sum_probs=55.9
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc---c--cchhc---c-------cccCCCC
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH---A--LSLAD---L-------ENFNPED 441 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~---~--~~~~~---l-------~~~~~~~ 441 (465)
.+++++++|+|+ |++|+.++..|.+.|++|+++.|+.+..+++.+.+... . .++.+ + .+ ...+
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~ 86 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVE-RFGG 86 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHH-HhCC
Confidence 367899999998 59999999999999999999999988888877765422 1 12211 1 11 2357
Q ss_pred eeEEEecCCCC
Q 012352 442 GMILANTTSIG 452 (465)
Q Consensus 442 ~DilInaT~~g 452 (465)
.|+||++++..
T Consensus 87 ~d~vi~~ag~~ 97 (264)
T PRK12829 87 LDVLVNNAGIA 97 (264)
T ss_pred CCEEEECCCCC
Confidence 89999998765
No 177
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.15 E-value=0.0011 Score=66.67 Aligned_cols=37 Identities=27% Similarity=0.482 Sum_probs=32.6
Q ss_pred cccCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEECC
Q 012352 377 SALAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRT 413 (465)
Q Consensus 377 ~~l~~k~vlV~GaG---g~g~ai~~~L~~~G~~v~i~~R~ 413 (465)
..+++|.++|+|+| |+|++++..|+++|++|++..|.
T Consensus 4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 35789999999995 99999999999999999996643
No 178
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.14 E-value=0.00079 Score=61.42 Aligned_cols=42 Identities=31% Similarity=0.427 Sum_probs=37.2
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET 423 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~ 423 (465)
+++-++|.|.+|+.++..|.+.|++|+++||++++++++.+.
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~ 43 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEA 43 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHT
T ss_pred CEEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHh
Confidence 478999999999999999999999999999999999988765
No 179
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.14 E-value=0.00056 Score=71.01 Aligned_cols=71 Identities=20% Similarity=0.274 Sum_probs=52.1
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECC-------------------HHHHHHHHHHHC---Cc--ccchh-
Q 012352 379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT-------------------YDRARELAETVG---GH--ALSLA- 432 (465)
Q Consensus 379 l~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~-------------------~~~a~~la~~~~---~~--~~~~~- 432 (465)
+.+++|+|+|+||+|..++..|+..|+ ++++++++ ..|++.+++.+. .. ...+.
T Consensus 133 l~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~ 212 (376)
T PRK08762 133 LLEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQE 212 (376)
T ss_pred HhcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence 456899999999999999999999999 99999998 567777776663 11 11111
Q ss_pred -----cccccCCCCeeEEEecCC
Q 012352 433 -----DLENFNPEDGMILANTTS 450 (465)
Q Consensus 433 -----~l~~~~~~~~DilInaT~ 450 (465)
.+.+ .+.++|+||+||-
T Consensus 213 ~~~~~~~~~-~~~~~D~Vv~~~d 234 (376)
T PRK08762 213 RVTSDNVEA-LLQDVDVVVDGAD 234 (376)
T ss_pred cCChHHHHH-HHhCCCEEEECCC
Confidence 1112 2457899999974
No 180
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0018 Score=62.58 Aligned_cols=76 Identities=34% Similarity=0.430 Sum_probs=53.0
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-c--c--cchh---ccccc------CCCC
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-H--A--LSLA---DLENF------NPED 441 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~--~--~~~~---~l~~~------~~~~ 441 (465)
.++++|+++|+|+ |++|++++..|++.|++|++++|+.+.. ++...+.. . . .++. ++..+ ....
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGR 89 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 3577899999998 6999999999999999999999997653 33333321 1 1 1221 11110 2356
Q ss_pred eeEEEecCCCCC
Q 012352 442 GMILANTTSIGM 453 (465)
Q Consensus 442 ~DilInaT~~gm 453 (465)
.|+||++++...
T Consensus 90 ~d~vi~~ag~~~ 101 (255)
T PRK06841 90 IDILVNSAGVAL 101 (255)
T ss_pred CCEEEECCCCCC
Confidence 899999998764
No 181
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.14 E-value=0.0013 Score=69.75 Aligned_cols=73 Identities=29% Similarity=0.314 Sum_probs=51.6
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHHC---CcccchhcccccCCCCeeEEEecCCCC
Q 012352 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY-DRARELAETVG---GHALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 379 l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~-~~a~~la~~~~---~~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
+++|+|+|+|+|++|.+++..|++.|++|++++++. +..++..+++. ......+...+ ..+++|+||+++++.
T Consensus 3 ~~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~d~vv~~~g~~ 79 (450)
T PRK14106 3 LKGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEE-FLEGVDLVVVSPGVP 79 (450)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchh-HhhcCCEEEECCCCC
Confidence 568999999999999999999999999999999975 44444444432 22111111112 235689999998765
No 182
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.13 E-value=0.0012 Score=70.02 Aligned_cols=69 Identities=33% Similarity=0.376 Sum_probs=52.7
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCC
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS 450 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~ 450 (465)
..+.||+++|+|.|.+|++++..|..+|++|+++++++.++..... .+....+++++ +..+|+||.+|+
T Consensus 250 ~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~-~G~~~~~leel----l~~ADIVI~atG 318 (476)
T PTZ00075 250 VMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQAAM-EGYQVVTLEDV----VETADIFVTATG 318 (476)
T ss_pred CCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHh-cCceeccHHHH----HhcCCEEEECCC
Confidence 5689999999999999999999999999999999999877644332 34333333332 346788888875
No 183
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.002 Score=63.22 Aligned_cols=74 Identities=20% Similarity=0.245 Sum_probs=53.1
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC-----Ccc----cchhc---c---ccc--CCCC
Q 012352 380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-----GHA----LSLAD---L---ENF--NPED 441 (465)
Q Consensus 380 ~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~-----~~~----~~~~~---l---~~~--~~~~ 441 (465)
.+|+++|+|+ |++|++++..|++.|++|+++.|+.++.+++.+... ... .++.+ + .+. ..+.
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 81 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR 81 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence 3678999998 699999999999999999999999988877765432 111 12211 1 110 2457
Q ss_pred eeEEEecCCCCC
Q 012352 442 GMILANTTSIGM 453 (465)
Q Consensus 442 ~DilInaT~~gm 453 (465)
.|+||++++...
T Consensus 82 id~vv~~ag~~~ 93 (280)
T PRK06914 82 IDLLVNNAGYAN 93 (280)
T ss_pred eeEEEECCcccc
Confidence 899999987643
No 184
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.0013 Score=63.59 Aligned_cols=74 Identities=26% Similarity=0.341 Sum_probs=54.6
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---c-------cccCC
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---L-------ENFNP 439 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---l-------~~~~~ 439 (465)
.+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+. ... .++.+ + .+ ..
T Consensus 4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~-~~ 82 (253)
T PRK06172 4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIA-AY 82 (253)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-Hh
Confidence 367899999998 599999999999999999999999988777665542 111 12211 1 11 23
Q ss_pred CCeeEEEecCCCC
Q 012352 440 EDGMILANTTSIG 452 (465)
Q Consensus 440 ~~~DilInaT~~g 452 (465)
+..|+|||+++..
T Consensus 83 g~id~li~~ag~~ 95 (253)
T PRK06172 83 GRLDYAFNNAGIE 95 (253)
T ss_pred CCCCEEEECCCCC
Confidence 5689999998764
No 185
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.12 E-value=0.0015 Score=63.13 Aligned_cols=71 Identities=23% Similarity=0.449 Sum_probs=53.1
Q ss_pred EEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchh---cccc----c--CCCCeeEEEec
Q 012352 383 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLA---DLEN----F--NPEDGMILANT 448 (465)
Q Consensus 383 ~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~---~l~~----~--~~~~~DilIna 448 (465)
+++|+|+ ||+|++++..|.+.|++|++++|+.++++.+.+.++... .++. ++.+ . ..++.|+|||+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6899997 699999999999999999999999999888877665321 1221 1111 0 23578999999
Q ss_pred CCCCC
Q 012352 449 TSIGM 453 (465)
Q Consensus 449 T~~gm 453 (465)
++...
T Consensus 82 ag~~~ 86 (248)
T PRK10538 82 AGLAL 86 (248)
T ss_pred CCccC
Confidence 98753
No 186
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.12 E-value=0.0012 Score=62.85 Aligned_cols=76 Identities=21% Similarity=0.219 Sum_probs=52.0
Q ss_pred CcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHH-HHHHHHHHHCCccc--chhcccccCCCCeeEEEecCC
Q 012352 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD-RARELAETVGGHAL--SLADLENFNPEDGMILANTTS 450 (465)
Q Consensus 374 ~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~-~a~~la~~~~~~~~--~~~~l~~~~~~~~DilInaT~ 450 (465)
|.+.++++|+|+|+|+|.+|..-+..|.+.|++|+|++.+.. ..+++++.-...++ .+. .. .+.++|+||-||+
T Consensus 2 P~~l~l~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~--~~-dl~~~~lVi~at~ 78 (205)
T TIGR01470 2 PVFANLEGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFD--AD-ILEGAFLVIAATD 78 (205)
T ss_pred CeEEEcCCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCC--HH-HhCCcEEEEECCC
Confidence 345678999999999999999999999999999999988654 34455443211111 111 11 2345778887776
Q ss_pred CC
Q 012352 451 IG 452 (465)
Q Consensus 451 ~g 452 (465)
-.
T Consensus 79 d~ 80 (205)
T TIGR01470 79 DE 80 (205)
T ss_pred CH
Confidence 53
No 187
>PRK05855 short chain dehydrogenase; Validated
Probab=97.12 E-value=0.0014 Score=71.03 Aligned_cols=76 Identities=32% Similarity=0.440 Sum_probs=57.4
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Cc--c--cchhc---c-------cccCC
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GH--A--LSLAD---L-------ENFNP 439 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~--~--~~~~~---l-------~~~~~ 439 (465)
.+.+++++|+|+ ||+|++++..|++.|++|++++|+.++.+++++.+. .. . .|+.+ + .+ ..
T Consensus 312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-~~ 390 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRA-EH 390 (582)
T ss_pred cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH-hc
Confidence 456789999998 699999999999999999999999999888877652 11 1 22221 1 11 34
Q ss_pred CCeeEEEecCCCCCC
Q 012352 440 EDGMILANTTSIGMQ 454 (465)
Q Consensus 440 ~~~DilInaT~~gm~ 454 (465)
+..|+|||++++...
T Consensus 391 g~id~lv~~Ag~~~~ 405 (582)
T PRK05855 391 GVPDIVVNNAGIGMA 405 (582)
T ss_pred CCCcEEEECCccCCC
Confidence 568999999988653
No 188
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.12 E-value=0.0013 Score=63.42 Aligned_cols=74 Identities=20% Similarity=0.315 Sum_probs=55.2
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC----c--c--cchh-----c-------ccc
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----H--A--LSLA-----D-------LEN 436 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~----~--~--~~~~-----~-------l~~ 436 (465)
.+++|+++|+|+ |++|.+++..|++.|++|++++|+.++++++.+++.. . . .++. + +.+
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 467899999988 5899999999999999999999999888887766531 1 1 1221 1 111
Q ss_pred cCCCCeeEEEecCCCC
Q 012352 437 FNPEDGMILANTTSIG 452 (465)
Q Consensus 437 ~~~~~~DilInaT~~g 452 (465)
..+..|+||++++..
T Consensus 89 -~~~~id~vi~~Ag~~ 103 (247)
T PRK08945 89 -QFGRLDGVLHNAGLL 103 (247)
T ss_pred -HhCCCCEEEECCccc
Confidence 245789999998763
No 189
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.12 E-value=0.0048 Score=61.15 Aligned_cols=133 Identities=23% Similarity=0.296 Sum_probs=82.6
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHHh--hhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAV--KCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v~--~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+.++++|++.....++- +++.+.++.+ .+.++.|+.|.+|.-..+- ..++.+++ .+.+...+..- -|
T Consensus 54 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p-~KDVDGl~~~n----~g 128 (278)
T PRK14172 54 EKVANSLGIDFKKIKLDESISEEDLINEIEELNKDNNVHGIMLQLPLPKHLDEKKITNKIDA-NKDIDCLTFIS----VG 128 (278)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCc-ccccCccCHhh----HH
Confidence 578999999987776653 3566777777 4778999999999742211 11111111 11111111110 01
Q ss_pred eEE-EE----eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHH
Q 012352 346 KLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARE 419 (465)
Q Consensus 346 ~l~-G~----NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~ 419 (465)
+++ |. -.--.|++.-|+.. +.++.||+|+|+|-+ =.|+-++..|.+.|+.|+++.+.....++
T Consensus 129 ~l~~g~~~~~PcTp~av~~lL~~~-----------~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~ 197 (278)
T PRK14172 129 KFYKGEKCFLPCTPNSVITLIKSL-----------NIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKE 197 (278)
T ss_pred HHhCCCCCCcCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence 111 11 11245666666653 257899999999998 58999999999999999999754444444
Q ss_pred HH
Q 012352 420 LA 421 (465)
Q Consensus 420 la 421 (465)
+.
T Consensus 198 ~~ 199 (278)
T PRK14172 198 VC 199 (278)
T ss_pred HH
Confidence 43
No 190
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0021 Score=63.20 Aligned_cols=73 Identities=27% Similarity=0.373 Sum_probs=54.0
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchh---cccc----c--CCCCeeEEE
Q 012352 381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLA---DLEN----F--NPEDGMILA 446 (465)
Q Consensus 381 ~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~---~l~~----~--~~~~~DilI 446 (465)
+|+++|+|+ |++|++++..|.+.|++|+++.|+.++...+.+.++... .++. ++.+ . ..+..|+||
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 578999998 699999999999999999999999988887776654321 1221 1111 0 245789999
Q ss_pred ecCCCCC
Q 012352 447 NTTSIGM 453 (465)
Q Consensus 447 naT~~gm 453 (465)
|+++...
T Consensus 83 ~~ag~~~ 89 (275)
T PRK08263 83 NNAGYGL 89 (275)
T ss_pred ECCCCcc
Confidence 9998753
No 191
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.11 E-value=0.00063 Score=70.69 Aligned_cols=68 Identities=28% Similarity=0.375 Sum_probs=48.2
Q ss_pred EEEEccchhHHHHHHHHHHCC-C-eEEEEECCHHHHHHHHHHHCC-c--c--cch---hcccccCCCCeeEEEecCCCC
Q 012352 384 FVVIGAGGAGKALAYGAKAKG-A-RVVIANRTYDRARELAETVGG-H--A--LSL---ADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 384 vlV~GaGg~g~ai~~~L~~~G-~-~v~i~~R~~~~a~~la~~~~~-~--~--~~~---~~l~~~~~~~~DilInaT~~g 452 (465)
|+|+|+|.+|++++..|++.+ . +|++++|+.++++++++.+.. . . ++. +++.+ .+.+.|+||||+|-.
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~-~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAE-LLRGCDVVINCAGPF 78 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHH-HHTTSSEEEE-SSGG
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHH-HHhcCCEEEECCccc
Confidence 689999999999999999887 4 899999999999999887432 1 1 232 22444 356789999998743
No 192
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.11 E-value=0.0017 Score=62.91 Aligned_cols=75 Identities=31% Similarity=0.451 Sum_probs=56.1
Q ss_pred cccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchh---cc-------cccC
Q 012352 377 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLA---DL-------ENFN 438 (465)
Q Consensus 377 ~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~---~l-------~~~~ 438 (465)
..+++|+++|+|++ |+|++++..|.+.|++|++++|+.++.+.+++++. ... .|+. ++ .+ .
T Consensus 7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~-~ 85 (255)
T PRK06113 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALS-K 85 (255)
T ss_pred cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-H
Confidence 45678999999984 99999999999999999999999988887776552 111 2221 11 11 2
Q ss_pred CCCeeEEEecCCCC
Q 012352 439 PEDGMILANTTSIG 452 (465)
Q Consensus 439 ~~~~DilInaT~~g 452 (465)
.+..|+|||+++..
T Consensus 86 ~~~~d~li~~ag~~ 99 (255)
T PRK06113 86 LGKVDILVNNAGGG 99 (255)
T ss_pred cCCCCEEEECCCCC
Confidence 45789999999864
No 193
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.0019 Score=63.35 Aligned_cols=72 Identities=22% Similarity=0.366 Sum_probs=53.4
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCeeEEEe
Q 012352 382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMILAN 447 (465)
Q Consensus 382 k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---l~~~------~~~~~DilIn 447 (465)
|++||+|+ |++|++++..|.+.|++|+++.|+.++.+.+.+..+... .++.+ +.+. ..+..|+|||
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 68999997 699999999999999999999999988887766554221 22221 1110 2356899999
Q ss_pred cCCCCC
Q 012352 448 TTSIGM 453 (465)
Q Consensus 448 aT~~gm 453 (465)
+++...
T Consensus 83 ~ag~~~ 88 (276)
T PRK06482 83 NAGYGL 88 (276)
T ss_pred CCCCCC
Confidence 998764
No 194
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.10 E-value=0.0047 Score=61.36 Aligned_cols=132 Identities=18% Similarity=0.254 Sum_probs=82.8
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHH--hhhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v--~~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+.++++|++.....+.- +++.+.++.+ .++++.|+.|.+|+...+ ...++.+++ .+.+...+..- -|
T Consensus 55 ~k~~~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p-~KDVDGl~~~n----~g 129 (284)
T PRK14177 55 VKACHKVGMGSEMIRLKEQTTTEELLGVIDKLNLDPNVDGILLQHPVPSQIDERAAFDRIAL-EKDVDGVTTLS----FG 129 (284)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCc-ccccccCChhh----HH
Confidence 668999999987666543 3567777777 467999999999975321 111111111 11111111110 01
Q ss_pred eE-EEE----eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHH
Q 012352 346 KL-FGY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARE 419 (465)
Q Consensus 346 ~l-~G~----NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~ 419 (465)
++ .|. -.--.|++.-|+.. +.++.||+|+|+|-+ =.|+-++..|.+.|+.|+++.......++
T Consensus 130 ~l~~g~~~~~PcTp~avi~ll~~y-----------~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~ 198 (284)
T PRK14177 130 KLSMGVETYLPCTPYGMVLLLKEY-----------GIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPS 198 (284)
T ss_pred HHHcCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence 11 111 11246677766653 267899999999998 59999999999999999999754443443
Q ss_pred H
Q 012352 420 L 420 (465)
Q Consensus 420 l 420 (465)
.
T Consensus 199 ~ 199 (284)
T PRK14177 199 I 199 (284)
T ss_pred H
Confidence 3
No 195
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0014 Score=64.24 Aligned_cols=71 Identities=28% Similarity=0.373 Sum_probs=51.0
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchh---cccc----c--CCCCeeEEEecC
Q 012352 382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLA---DLEN----F--NPEDGMILANTT 449 (465)
Q Consensus 382 k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~---~l~~----~--~~~~~DilInaT 449 (465)
|+++|+|+ ||+|++++..|++.|++|++++|+.++.+.+.+. +... .++. ++.+ . ..+..|+|||++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAA-GFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 68999998 5999999999999999999999998887766432 2211 1221 1111 0 235789999999
Q ss_pred CCCC
Q 012352 450 SIGM 453 (465)
Q Consensus 450 ~~gm 453 (465)
+.+.
T Consensus 81 g~~~ 84 (274)
T PRK05693 81 GYGA 84 (274)
T ss_pred CCCC
Confidence 8653
No 196
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0015 Score=61.95 Aligned_cols=74 Identities=26% Similarity=0.269 Sum_probs=53.3
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc--cch---hccccc------CCCCee
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA--LSL---ADLENF------NPEDGM 443 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~--~~~---~~l~~~------~~~~~D 443 (465)
+++|++||+|+ |++|++++..|.+.|++|++++|+.++..+..+++.. .. .++ +++... ..+..|
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLD 84 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence 56899999998 6999999999999999999999998876665554431 11 122 111110 235789
Q ss_pred EEEecCCCC
Q 012352 444 ILANTTSIG 452 (465)
Q Consensus 444 ilInaT~~g 452 (465)
+||++++..
T Consensus 85 ~vi~~ag~~ 93 (239)
T PRK12828 85 ALVNIAGAF 93 (239)
T ss_pred EEEECCccc
Confidence 999998764
No 197
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0013 Score=64.51 Aligned_cols=75 Identities=24% Similarity=0.329 Sum_probs=54.8
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC-----Ccc----cchhc---cccc------C
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-----GHA----LSLAD---LENF------N 438 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~-----~~~----~~~~~---l~~~------~ 438 (465)
.+++|+++|+|+ |++|++++..|.+.|++|++++|+.++.+.+.+++. ... .++.+ +... .
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW 83 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 367899999998 699999999999999999999999888777766542 111 12211 1110 2
Q ss_pred CCCeeEEEecCCCC
Q 012352 439 PEDGMILANTTSIG 452 (465)
Q Consensus 439 ~~~~DilInaT~~g 452 (465)
.+..|+|||+++..
T Consensus 84 ~~~~d~li~~ag~~ 97 (276)
T PRK05875 84 HGRLHGVVHCAGGS 97 (276)
T ss_pred cCCCCEEEECCCcc
Confidence 35689999999754
No 198
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.002 Score=63.13 Aligned_cols=71 Identities=25% Similarity=0.375 Sum_probs=52.1
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc-----cchhc----------ccccCCCCe
Q 012352 382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA-----LSLAD----------LENFNPEDG 442 (465)
Q Consensus 382 k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~-----~~~~~----------l~~~~~~~~ 442 (465)
|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++. ... .|+.+ +.+ ..+..
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHA-AHGSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHH-hcCCC
Confidence 46899988 599999999999999999999999988777766542 111 22211 111 24568
Q ss_pred eEEEecCCCCC
Q 012352 443 MILANTTSIGM 453 (465)
Q Consensus 443 DilInaT~~gm 453 (465)
|+|||+++.+.
T Consensus 80 d~lv~~ag~~~ 90 (272)
T PRK07832 80 DVVMNIAGISA 90 (272)
T ss_pred CEEEECCCCCC
Confidence 99999998653
No 199
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.08 E-value=0.0019 Score=62.13 Aligned_cols=73 Identities=25% Similarity=0.394 Sum_probs=52.1
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEE-EECCHHHHHHHHHHHC---Cc--c--cchh---cc-------cccCCC
Q 012352 380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVI-ANRTYDRARELAETVG---GH--A--LSLA---DL-------ENFNPE 440 (465)
Q Consensus 380 ~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i-~~R~~~~a~~la~~~~---~~--~--~~~~---~l-------~~~~~~ 440 (465)
.+++++|+|+ |++|++++..|.+.|++|++ ..|+.++.+++.+++. .. . .++. ++ .+ ..+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDE-EFG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH-HcC
Confidence 4689999998 59999999999999998766 5888888877766652 21 1 1221 11 11 235
Q ss_pred CeeEEEecCCCCC
Q 012352 441 DGMILANTTSIGM 453 (465)
Q Consensus 441 ~~DilInaT~~gm 453 (465)
..|+|||+++.+.
T Consensus 82 ~id~vi~~ag~~~ 94 (250)
T PRK08063 82 RLDVFVNNAASGV 94 (250)
T ss_pred CCCEEEECCCCCC
Confidence 6899999997653
No 200
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.08 E-value=0.0051 Score=61.01 Aligned_cols=132 Identities=19% Similarity=0.243 Sum_probs=82.3
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHH--hhhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v--~~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+.++++|++..-..++- +++.+.++.+ .+++..|+.|..|....+ ...++.+++ -+.+...+.+- -|
T Consensus 53 ~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p-~KDVDGl~~~n----~g 127 (281)
T PRK14183 53 AKACDRVGIYSITHEMPSTISQKEILETIAMMNNNPNIDGILVQLPLPKHIDTTKILEAIDP-KKDVDGFHPYN----VG 127 (281)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCccCeEEEeCCCCCCCCHHHHHhccCc-hhcccccChhh----hh
Confidence 567899999976555432 3577777777 577899999999975222 112222222 12222222210 11
Q ss_pred eE-EEE----eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHH
Q 012352 346 KL-FGY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARE 419 (465)
Q Consensus 346 ~l-~G~----NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~ 419 (465)
++ .|. -.--.|++.-|++. +.+++||+|+|+|-| -.|+-++..|.+.|+.|+++.......++
T Consensus 128 ~l~~g~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~ 196 (281)
T PRK14183 128 RLVTGLDGFVPCTPLGVMELLEEY-----------EIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKA 196 (281)
T ss_pred HHhcCCCCCCCCcHHHHHHHHHHc-----------CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence 22 111 11145666666653 267899999999998 79999999999999999999754443333
Q ss_pred H
Q 012352 420 L 420 (465)
Q Consensus 420 l 420 (465)
+
T Consensus 197 ~ 197 (281)
T PRK14183 197 H 197 (281)
T ss_pred H
Confidence 3
No 201
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=97.08 E-value=0.0015 Score=68.21 Aligned_cols=70 Identities=33% Similarity=0.401 Sum_probs=52.4
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCC
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~ 451 (465)
..+.+++|+|+|.|.+|+.++..+...|++|+++++++.++.... ..+....+.++ .+..+|++|.+|+.
T Consensus 191 ~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~~v~~lee----al~~aDVVItaTG~ 260 (406)
T TIGR00936 191 LLIAGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGFRVMTMEE----AAKIGDIFITATGN 260 (406)
T ss_pred CCCCcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCCEeCCHHH----HHhcCCEEEECCCC
Confidence 347899999999999999999999999999999999998764433 23333333322 23467888888763
No 202
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.07 E-value=0.0017 Score=62.34 Aligned_cols=74 Identities=24% Similarity=0.337 Sum_probs=54.1
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchh---cccc----c--CCCC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLA---DLEN----F--NPED 441 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~---~l~~----~--~~~~ 441 (465)
+++++++|+|+ ||+|++++..|.+.|++|++++|+.++.+.+.+++. ... .++. ++.+ . ..+.
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46789999998 799999999999999999999999988877766552 111 1221 1110 0 2356
Q ss_pred eeEEEecCCCC
Q 012352 442 GMILANTTSIG 452 (465)
Q Consensus 442 ~DilInaT~~g 452 (465)
.|.|||+++..
T Consensus 83 id~vi~~ag~~ 93 (253)
T PRK08217 83 LNGLINNAGIL 93 (253)
T ss_pred CCEEEECCCcc
Confidence 89999999864
No 203
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=97.07 E-value=0.0014 Score=59.51 Aligned_cols=68 Identities=26% Similarity=0.342 Sum_probs=48.7
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCC
Q 012352 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS 450 (465)
Q Consensus 379 l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~ 450 (465)
+++|++.|+|.|.-|++-+..|.+.|.+|+|..|...+..+.|++-|....++.+. ..++|+|+..+|
T Consensus 2 l~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~~~~eA----v~~aDvV~~L~P 69 (165)
T PF07991_consen 2 LKGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVMSVAEA----VKKADVVMLLLP 69 (165)
T ss_dssp HCTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECCEHHHH----HHC-SEEEE-S-
T ss_pred cCCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeeccHHHH----HhhCCEEEEeCC
Confidence 46899999999999999999999999999999999888888888766554444332 234677776665
No 204
>PRK05599 hypothetical protein; Provisional
Probab=97.07 E-value=0.0016 Score=63.17 Aligned_cols=69 Identities=17% Similarity=0.173 Sum_probs=51.4
Q ss_pred cEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Cc---c--cchhc---c-------cccCCCCe
Q 012352 382 KLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GH---A--LSLAD---L-------ENFNPEDG 442 (465)
Q Consensus 382 k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~---~--~~~~~---l-------~~~~~~~~ 442 (465)
+.++|+|++ |+|++++..|+ .|++|++++|+.++++++++++. .. . .|+.+ + .+ ..+..
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g~i 78 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQE-LAGEI 78 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHH-hcCCC
Confidence 368999996 99999999998 59999999999999998887763 11 1 12211 1 11 34678
Q ss_pred eEEEecCCCC
Q 012352 443 MILANTTSIG 452 (465)
Q Consensus 443 DilInaT~~g 452 (465)
|++||+++..
T Consensus 79 d~lv~nag~~ 88 (246)
T PRK05599 79 SLAVVAFGIL 88 (246)
T ss_pred CEEEEecCcC
Confidence 9999998764
No 205
>PLN02928 oxidoreductase family protein
Probab=97.06 E-value=0.00073 Score=69.41 Aligned_cols=75 Identities=17% Similarity=0.267 Sum_probs=50.3
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHH--------HHHCCcccchhcccccCCCCeeEEEec
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELA--------ETVGGHALSLADLENFNPEDGMILANT 448 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la--------~~~~~~~~~~~~l~~~~~~~~DilIna 448 (465)
..+.+|++.|+|.|.+|+.++..|..+|++|+.++|+..+..... ..+......+.++.+ .+.++|+|+++
T Consensus 155 ~~l~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~e-ll~~aDiVvl~ 233 (347)
T PLN02928 155 DTLFGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYE-FAGEADIVVLC 233 (347)
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHH-HHhhCCEEEEC
Confidence 357899999999999999999999999999999999743221110 000000012233444 34567888888
Q ss_pred CCCC
Q 012352 449 TSIG 452 (465)
Q Consensus 449 T~~g 452 (465)
+|..
T Consensus 234 lPlt 237 (347)
T PLN02928 234 CTLT 237 (347)
T ss_pred CCCC
Confidence 8754
No 206
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.04 E-value=0.0022 Score=62.20 Aligned_cols=73 Identities=25% Similarity=0.358 Sum_probs=53.2
Q ss_pred CcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC-----Ccc----cchhc---c-------cccCCC
Q 012352 381 GKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVG-----GHA----LSLAD---L-------ENFNPE 440 (465)
Q Consensus 381 ~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~-----~~~----~~~~~---l-------~~~~~~ 440 (465)
+|+++|+|++ ++|++++..|++.|++|++++|+..+.+++++++. ... .++.+ + .+ ..+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~-~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDE-IFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHH-HcC
Confidence 5789999984 99999999999999999999999888877766542 111 12211 1 11 235
Q ss_pred CeeEEEecCCCCCC
Q 012352 441 DGMILANTTSIGMQ 454 (465)
Q Consensus 441 ~~DilInaT~~gm~ 454 (465)
..|++||+++....
T Consensus 81 ~id~vv~~ag~~~~ 94 (259)
T PRK12384 81 RVDLLVYNAGIAKA 94 (259)
T ss_pred CCCEEEECCCcCCC
Confidence 78999999976543
No 207
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=97.04 E-value=0.0011 Score=63.23 Aligned_cols=76 Identities=26% Similarity=0.309 Sum_probs=51.8
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC----cc--c--chh---ccc----c--cCC
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----HA--L--SLA---DLE----N--FNP 439 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~----~~--~--~~~---~l~----~--~~~ 439 (465)
++.||+|+++|+ ||+|++++.+|.+.|+.+.++.-+.++.+..++--.. ++ + ++. ++. + ..+
T Consensus 2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f 81 (261)
T KOG4169|consen 2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF 81 (261)
T ss_pred cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence 456899999965 8999999999999999666665556666666543221 11 1 111 111 1 157
Q ss_pred CCeeEEEecCCCCC
Q 012352 440 EDGMILANTTSIGM 453 (465)
Q Consensus 440 ~~~DilInaT~~gm 453 (465)
+..|++||.+++..
T Consensus 82 g~iDIlINgAGi~~ 95 (261)
T KOG4169|consen 82 GTIDILINGAGILD 95 (261)
T ss_pred CceEEEEccccccc
Confidence 88999999998864
No 208
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.00072 Score=66.06 Aligned_cols=69 Identities=28% Similarity=0.366 Sum_probs=49.3
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchh---cc-------cccCCCCeeEEEe
Q 012352 381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLA---DL-------ENFNPEDGMILAN 447 (465)
Q Consensus 381 ~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~---~l-------~~~~~~~~DilIn 447 (465)
+++++|+|+ ||+|++++..|++.|++|++.+|+.++.+... +... .|+. ++ .+ ..+..|+|||
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~~~-~~g~~d~li~ 79 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIP---GVELLELDVTDDASVQAAVDEVIA-RAGRIDVLVN 79 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccC---CCeeEEeecCCHHHHHHHHHHHHH-hCCCCCEEEE
Confidence 578999998 69999999999999999999999977654321 1111 1221 11 11 3457899999
Q ss_pred cCCCCC
Q 012352 448 TTSIGM 453 (465)
Q Consensus 448 aT~~gm 453 (465)
+++.+.
T Consensus 80 ~ag~~~ 85 (270)
T PRK06179 80 NAGVGL 85 (270)
T ss_pred CCCCCC
Confidence 998754
No 209
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.03 E-value=0.003 Score=62.72 Aligned_cols=133 Identities=20% Similarity=0.288 Sum_probs=83.3
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHHhh--hccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVK--CCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v~~--~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+..+++|++.....++- +++.+.++.+ .++.+.|+.|.+|....+-. .++.+++ .+.+...+.+- -|
T Consensus 52 ~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p-~KDVDGl~~~N----~g 126 (282)
T PRK14166 52 AKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIIS-SKDVDGFHPIN----VG 126 (282)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCc-ccCcccCChhh----hH
Confidence 567899999987666553 3566666766 46789999999997532211 2222222 12222222220 11
Q ss_pred eE-EEE-----eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHH
Q 012352 346 KL-FGY-----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRAR 418 (465)
Q Consensus 346 ~l-~G~-----NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~ 418 (465)
++ .|. -.--.|++.-|+.. +.++.||+|+|+|-+ =.|+-++..|.+.|+.|+++.+.....+
T Consensus 127 ~l~~g~~~~~~PcTp~avi~lL~~y-----------~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~ 195 (282)
T PRK14166 127 YLNLGLESGFLPCTPLGVMKLLKAY-----------EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS 195 (282)
T ss_pred HHhcCCCCCCcCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 22 121 11245666666653 257899999999998 5899999999999999999976544444
Q ss_pred HHH
Q 012352 419 ELA 421 (465)
Q Consensus 419 ~la 421 (465)
+..
T Consensus 196 ~~~ 198 (282)
T PRK14166 196 LYT 198 (282)
T ss_pred HHH
Confidence 433
No 210
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.03 E-value=0.0055 Score=61.18 Aligned_cols=133 Identities=17% Similarity=0.216 Sum_probs=82.4
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHHh--hhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAV--KCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v~--~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+.++++|++.....++. +++.+.++.+ .++...|+.|..|.-..+- ..++.+++ .+.+...+..- -|
T Consensus 54 ~k~a~~~Gi~~~~~~l~~~~~e~~l~~~I~~lN~d~~V~GIlvqlPLP~~i~~~~i~~~I~p-~KDVDGl~~~n----~g 128 (294)
T PRK14187 54 QRKAEMLGLRSETILLPSTISESSLIEKINELNNDDSVHGILVQLPVPNHIDKNLIINTIDP-EKDVDGFHNEN----VG 128 (294)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCc-ccCcccCChhh----HH
Confidence 667999999987666653 2566667777 5778999999999752211 11111111 11111111110 11
Q ss_pred eEE-EE------eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHH
Q 012352 346 KLF-GY------NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRA 417 (465)
Q Consensus 346 ~l~-G~------NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a 417 (465)
+++ |. -.--.|++.-|+.. +.++.||+|+|+|-+ =.|+-++..|.+.|+.|+++.......
T Consensus 129 ~l~~g~~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l 197 (294)
T PRK14187 129 RLFTGQKKNCLIPCTPKGCLYLIKTI-----------TRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDL 197 (294)
T ss_pred HHhCCCCCCCccCcCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCH
Confidence 221 11 11245666666653 267899999999998 599999999999999999997654444
Q ss_pred HHHH
Q 012352 418 RELA 421 (465)
Q Consensus 418 ~~la 421 (465)
++..
T Consensus 198 ~~~~ 201 (294)
T PRK14187 198 ADYC 201 (294)
T ss_pred HHHH
Confidence 4443
No 211
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.02 E-value=0.0011 Score=67.77 Aligned_cols=37 Identities=32% Similarity=0.529 Sum_probs=34.0
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCH
Q 012352 378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY 414 (465)
Q Consensus 378 ~l~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~~ 414 (465)
.+++++|+|+|+||.|..++..|+..|+ ++++++++.
T Consensus 21 ~L~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 21 KIREKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred hhcCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 3667899999999999999999999998 999999974
No 212
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.02 E-value=0.0022 Score=61.58 Aligned_cols=73 Identities=22% Similarity=0.325 Sum_probs=53.2
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchh---ccccc------CCCCe
Q 012352 380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLA---DLENF------NPEDG 442 (465)
Q Consensus 380 ~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~---~l~~~------~~~~~ 442 (465)
++|++||+|+ |++|++++..|.+.|++|++++|+.++.+++.+.+. ... .++. ++.+. ...+.
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999998 599999999999999999999999988887766542 111 1221 11110 23568
Q ss_pred eEEEecCCCC
Q 012352 443 MILANTTSIG 452 (465)
Q Consensus 443 DilInaT~~g 452 (465)
|++||+++..
T Consensus 82 d~vi~~ag~~ 91 (250)
T TIGR03206 82 DVLVNNAGWD 91 (250)
T ss_pred CEEEECCCCC
Confidence 9999999763
No 213
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.02 E-value=0.0016 Score=62.13 Aligned_cols=75 Identities=33% Similarity=0.449 Sum_probs=53.8
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Cc--c--cchhc---cccc------CCCC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GH--A--LSLAD---LENF------NPED 441 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~--~--~~~~~---l~~~------~~~~ 441 (465)
+.+++++|+|+ |++|+.++..|.+.|++|++++|++++.+.+.+.+. .. . .++.+ +... ....
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA 82 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 45689999998 699999999999999999999999988777666543 11 1 12211 1110 2356
Q ss_pred eeEEEecCCCCC
Q 012352 442 GMILANTTSIGM 453 (465)
Q Consensus 442 ~DilInaT~~gm 453 (465)
.|.||++++...
T Consensus 83 id~vi~~ag~~~ 94 (246)
T PRK05653 83 LDILVNNAGITR 94 (246)
T ss_pred CCEEEECCCcCC
Confidence 799999987643
No 214
>PRK05650 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.0022 Score=62.83 Aligned_cols=73 Identities=19% Similarity=0.300 Sum_probs=53.1
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCCCeeE
Q 012352 382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPEDGMI 444 (465)
Q Consensus 382 k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---l~~~------~~~~~Di 444 (465)
++++|+|+ ||+|++++..|.+.|++|+++.|+.++++++.+++. ... .++.+ +.+. ..+..|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899988 699999999999999999999999998887766552 111 12211 1110 2357899
Q ss_pred EEecCCCCCC
Q 012352 445 LANTTSIGMQ 454 (465)
Q Consensus 445 lInaT~~gm~ 454 (465)
|||+++....
T Consensus 81 lI~~ag~~~~ 90 (270)
T PRK05650 81 IVNNAGVASG 90 (270)
T ss_pred EEECCCCCCC
Confidence 9999987643
No 215
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.01 E-value=0.0057 Score=60.85 Aligned_cols=133 Identities=16% Similarity=0.263 Sum_probs=83.2
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHHh--hhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAV--KCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v~--~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+.++++|++.....++- +++.+.++.+ .++++.|+.|.+|.-..+- ..++.+++ .+.+...+..- -|
T Consensus 54 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLp~~i~~~~i~~~I~p-~KDVDGl~~~n----~g 128 (284)
T PRK14190 54 KKAAEKVGIYSELYEFPADITEEELLALIDRLNADPRINGILVQLPLPKHIDEKAVIERISP-EKDVDGFHPIN----VG 128 (284)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCc-cccccccCHhh----HH
Confidence 667999999987666654 2577777777 5678999999999753211 11222222 11222222210 01
Q ss_pred eEE-EE----eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHH
Q 012352 346 KLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARE 419 (465)
Q Consensus 346 ~l~-G~----NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~ 419 (465)
+++ |. -.--.|++.-|+.. +.+++||+|+|+|-+ =.|+-++..|.+.|+.|+++.......++
T Consensus 129 ~l~~~~~~~~PcTp~av~~lL~~~-----------~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~ 197 (284)
T PRK14190 129 RMMLGQDTFLPCTPHGILELLKEY-----------NIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAE 197 (284)
T ss_pred HHhcCCCCCCCCCHHHHHHHHHHc-----------CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHH
Confidence 111 10 11245666666653 367899999999998 59999999999999999999665444444
Q ss_pred HH
Q 012352 420 LA 421 (465)
Q Consensus 420 la 421 (465)
..
T Consensus 198 ~~ 199 (284)
T PRK14190 198 LT 199 (284)
T ss_pred HH
Confidence 33
No 216
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.002 Score=61.47 Aligned_cols=70 Identities=20% Similarity=0.264 Sum_probs=51.8
Q ss_pred EEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc--chh---ccccc---CCCCeeEEEecCCCC
Q 012352 383 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL--SLA---DLENF---NPEDGMILANTTSIG 452 (465)
Q Consensus 383 ~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~--~~~---~l~~~---~~~~~DilInaT~~g 452 (465)
+++|+|+ ||+|++++..|.+.|++|++++|+.++.++++++++...+ ++. ++.+. .....|++||+++.+
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~ 80 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPS 80 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCcc
Confidence 5899988 6999999999999999999999999998888777643322 221 12110 112579999998754
No 217
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.01 E-value=0.0044 Score=61.45 Aligned_cols=125 Identities=21% Similarity=0.288 Sum_probs=81.9
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHHhhhccccCHHHHhccceeeEEEeccC---
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSD--- 344 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v~~~~d~~~~~A~~~gavNtv~~~~~~--- 344 (465)
.+.++++|++.....++- +++.+.++.+ .++.+.|+.|..|....+ |+ -+...+++.-.=- |
T Consensus 52 ~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d~~V~GIivqlPLp~~i----~~----~~i~~~I~p~KDV--DGl~ 121 (282)
T PRK14182 52 RKDCEEVGITSVEHHLPATTTQAELLALIARLNADPAVHGILVQLPLPKHV----DE----RAVLDAISPAKDA--DGFH 121 (282)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCC----CH----HHHHhccCcccCc--CCCC
Confidence 567999999987666643 3577777777 577899999999975321 11 1222222222100 1
Q ss_pred ----CeEE-EE-----eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECC
Q 012352 345 ----GKLF-GY-----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRT 413 (465)
Q Consensus 345 ----g~l~-G~-----NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~ 413 (465)
|+++ |. -.--.|++.-|+.. +.+++||+|+|+|-+ =.|+-++..|.+.|+.|+++...
T Consensus 122 ~~n~g~l~~g~~~~~~PcTp~avi~ll~~~-----------~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~ 190 (282)
T PRK14182 122 PFNVGALSIGIAGVPRPCTPAGVMRMLDEA-----------RVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSR 190 (282)
T ss_pred HhHHHHHhCCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC
Confidence 1111 11 11246677767653 267899999999998 59999999999999999999765
Q ss_pred HHHHH
Q 012352 414 YDRAR 418 (465)
Q Consensus 414 ~~~a~ 418 (465)
....+
T Consensus 191 T~nl~ 195 (282)
T PRK14182 191 TADLA 195 (282)
T ss_pred CCCHH
Confidence 44333
No 218
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.01 E-value=0.0041 Score=61.92 Aligned_cols=132 Identities=19% Similarity=0.287 Sum_probs=82.6
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHH--hhhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v--~~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+.++++|++.....++- +++.+.++.+ .+..+.|+.|.+|.-..+ ...++.+++ .+.+...+.+- -|
T Consensus 51 ~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p-~KDVDGl~~~N----~g 125 (287)
T PRK14173 51 DRQAKALGLRSQVEVLPESTSQEELLELIARLNADPEVDGILVQLPLPPHIDFQRVLEAIDP-LKDVDGFHPLN----VG 125 (287)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCc-cccccccChhh----hH
Confidence 567899999987776653 3577777777 467899999999964321 111222221 12222222210 01
Q ss_pred eEE-EE----eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHH
Q 012352 346 KLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARE 419 (465)
Q Consensus 346 ~l~-G~----NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~ 419 (465)
+++ |. -.--.|++.-|+.. +.++.||+|+|+|.+ =.|+-++..|.+.|+.|+++.+.....++
T Consensus 126 ~l~~~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~ 194 (287)
T PRK14173 126 RLWMGGEALEPCTPAGVVRLLKHY-----------GIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPA 194 (287)
T ss_pred HHhcCCCCCCCCCHHHHHHHHHHc-----------CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence 121 11 11245666666652 367899999999998 59999999999999999999655444333
Q ss_pred H
Q 012352 420 L 420 (465)
Q Consensus 420 l 420 (465)
.
T Consensus 195 ~ 195 (287)
T PRK14173 195 V 195 (287)
T ss_pred H
Confidence 3
No 219
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.00 E-value=0.0014 Score=55.14 Aligned_cols=65 Identities=22% Similarity=0.328 Sum_probs=44.3
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccch--hcccccCCCCeeEEEecCC
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL--ADLENFNPEDGMILANTTS 450 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~--~~l~~~~~~~~DilInaT~ 450 (465)
.++++|+|||+|+|.+|..-+..|.+.|++|+|++.+.+..+ + .+.| ....+ .+.++|+||.||+
T Consensus 3 l~l~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~~~~~------~--~i~~~~~~~~~-~l~~~~lV~~at~ 69 (103)
T PF13241_consen 3 LDLKGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEIEFSE------G--LIQLIRREFEE-DLDGADLVFAATD 69 (103)
T ss_dssp E--TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSEHHHH------T--SCEEEESS-GG-GCTTESEEEE-SS
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhhh------h--HHHHHhhhHHH-HHhhheEEEecCC
Confidence 567899999999999999999999999999999999861111 1 1111 11222 3566888888875
No 220
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=97.00 E-value=0.0017 Score=65.93 Aligned_cols=70 Identities=26% Similarity=0.323 Sum_probs=51.3
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCC
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS 450 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~ 450 (465)
..+++|++.|+|.|.+|++++..|...|.+|++.+|+..+..+.+...+....+.. + ...++|+|+.++|
T Consensus 13 ~~L~gktIgIIG~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~---e-aa~~ADVVvLaVP 82 (330)
T PRK05479 13 SLIKGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVA---E-AAKWADVIMILLP 82 (330)
T ss_pred hhhCCCEEEEEeeHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHH---H-HHhcCCEEEEcCC
Confidence 34778999999999999999999999999999999987777777666554322222 1 2234566666665
No 221
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=96.99 E-value=0.0025 Score=61.99 Aligned_cols=75 Identities=28% Similarity=0.389 Sum_probs=52.5
Q ss_pred ccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECC-HHHHHHHHHHHC---Ccc----cchhc---c-------cccC
Q 012352 378 ALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRT-YDRARELAETVG---GHA----LSLAD---L-------ENFN 438 (465)
Q Consensus 378 ~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~-~~~a~~la~~~~---~~~----~~~~~---l-------~~~~ 438 (465)
++++|+++|+|++ |+|++++..|+++|++|++..|+ .+..+.+.+++. ... .++.+ + .+ .
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~-~ 82 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVK-E 82 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH-H
Confidence 4778999999985 99999999999999998888874 455555555542 111 12221 1 11 2
Q ss_pred CCCeeEEEecCCCCC
Q 012352 439 PEDGMILANTTSIGM 453 (465)
Q Consensus 439 ~~~~DilInaT~~gm 453 (465)
.+..|+|||+++...
T Consensus 83 ~g~id~lv~~ag~~~ 97 (261)
T PRK08936 83 FGTLDVMINNAGIEN 97 (261)
T ss_pred cCCCCEEEECCCCCC
Confidence 457899999998653
No 222
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.99 E-value=0.0023 Score=62.04 Aligned_cols=74 Identities=34% Similarity=0.414 Sum_probs=51.7
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCC
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPE 440 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---l~~~------~~~ 440 (465)
.+++|+++|+|+ ||+|++++..|++.|++|++++|+.. ..++.+++. ... .++.+ +.+. ..+
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG 83 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 467899999998 59999999999999999999999853 445555442 111 12211 1110 245
Q ss_pred CeeEEEecCCCC
Q 012352 441 DGMILANTTSIG 452 (465)
Q Consensus 441 ~~DilInaT~~g 452 (465)
..|+|||+++..
T Consensus 84 ~id~lv~nAg~~ 95 (260)
T PRK12823 84 RIDVLINNVGGT 95 (260)
T ss_pred CCeEEEECCccc
Confidence 789999998754
No 223
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=96.99 E-value=0.0012 Score=59.94 Aligned_cols=69 Identities=32% Similarity=0.348 Sum_probs=50.0
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-ccc----------chhcccccCCCCeeEEEecCCC
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HAL----------SLADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~~~----------~~~~l~~~~~~~~DilInaT~~ 451 (465)
+|.|+|+|..|.+++..|+..|.+|++|.|+++..+.+.+.-.. ... -..++.+ .+.++|+||-++|.
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~-a~~~ad~IiiavPs 79 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEE-ALEDADIIIIAVPS 79 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHH-HHTT-SEEEE-S-G
T ss_pred CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHH-HhCcccEEEecccH
Confidence 58999999999999999999999999999999988888765431 110 0123333 35678999999886
Q ss_pred C
Q 012352 452 G 452 (465)
Q Consensus 452 g 452 (465)
.
T Consensus 80 ~ 80 (157)
T PF01210_consen 80 Q 80 (157)
T ss_dssp G
T ss_pred H
Confidence 4
No 224
>PRK08324 short chain dehydrogenase; Validated
Probab=96.99 E-value=0.0026 Score=71.10 Aligned_cols=76 Identities=36% Similarity=0.464 Sum_probs=57.4
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--cc----cchhc---cccc------CCCC
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA----LSLAD---LENF------NPED 441 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~--~~----~~~~~---l~~~------~~~~ 441 (465)
.+.+|+++|+|+ ||+|++++..|.+.|++|++++|+.++.+.+++.++. .. .++.+ +.+. ..++
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~ 498 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGG 498 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 457899999996 7999999999999999999999999998888777653 11 12211 1110 2457
Q ss_pred eeEEEecCCCCC
Q 012352 442 GMILANTTSIGM 453 (465)
Q Consensus 442 ~DilInaT~~gm 453 (465)
.|+|||+++...
T Consensus 499 iDvvI~~AG~~~ 510 (681)
T PRK08324 499 VDIVVSNAGIAI 510 (681)
T ss_pred CCEEEECCCCCC
Confidence 899999998754
No 225
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0021 Score=63.21 Aligned_cols=75 Identities=31% Similarity=0.341 Sum_probs=51.3
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHH-------HHHHHHHHC---Ccc----cchh---ccccc---
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR-------ARELAETVG---GHA----LSLA---DLENF--- 437 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~-------a~~la~~~~---~~~----~~~~---~l~~~--- 437 (465)
+++|+++|+|+ ||+|++++..|++.|++|+++.|+.++ .+++++++. ... .++. ++...
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 56899999998 599999999999999999999998653 333444332 111 1221 11110
Q ss_pred ---CCCCeeEEEecCCCCC
Q 012352 438 ---NPEDGMILANTTSIGM 453 (465)
Q Consensus 438 ---~~~~~DilInaT~~gm 453 (465)
..+..|+|||+++...
T Consensus 84 ~~~~~g~id~li~~ag~~~ 102 (273)
T PRK08278 84 AVERFGGIDICVNNASAIN 102 (273)
T ss_pred HHHHhCCCCEEEECCCCcC
Confidence 2357899999998654
No 226
>PLN02494 adenosylhomocysteinase
Probab=96.98 E-value=0.0018 Score=68.38 Aligned_cols=69 Identities=33% Similarity=0.381 Sum_probs=50.6
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCC
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS 450 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~ 450 (465)
..+.||+++|+|.|.+|+.++..+...|++|+++++++.++... ...+....++++ .+..+|++|.+|+
T Consensus 250 i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA-~~~G~~vv~leE----al~~ADVVI~tTG 318 (477)
T PLN02494 250 VMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQA-LMEGYQVLTLED----VVSEADIFVTTTG 318 (477)
T ss_pred CccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHH-HhcCCeeccHHH----HHhhCCEEEECCC
Confidence 45789999999999999999999999999999999998765432 222322223322 2345688888776
No 227
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0013 Score=63.68 Aligned_cols=70 Identities=23% Similarity=0.314 Sum_probs=49.2
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc--c--cchh---ccccc------CCCCee
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH--A--LSLA---DLENF------NPEDGM 443 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~--~--~~~~---~l~~~------~~~~~D 443 (465)
.+++|+++|+|+ ||+|++++..|++.|++|+++.|+.++. ..+.. . .++. ++.+. ..+..|
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 77 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET-----VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLD 77 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh-----hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 467899999998 5999999999999999999999987651 11111 1 1221 11110 235689
Q ss_pred EEEecCCCC
Q 012352 444 ILANTTSIG 452 (465)
Q Consensus 444 ilInaT~~g 452 (465)
+|||+++..
T Consensus 78 ~vi~~ag~~ 86 (252)
T PRK07856 78 VLVNNAGGS 86 (252)
T ss_pred EEEECCCCC
Confidence 999999864
No 228
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.97 E-value=0.0068 Score=60.35 Aligned_cols=132 Identities=20% Similarity=0.315 Sum_probs=81.8
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHH--hhhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v--~~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
-+.++++|++.....++. +++.+.++.+ .++++.|+.|.+|.-..+ ...++.+++ -+.+...+.. .-|
T Consensus 54 ~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~LN~D~~V~GIlvqlPLP~~id~~~i~~~I~p-~KDVDGl~~~----N~g 128 (288)
T PRK14171 54 IKNAHKIGIDTLLVNLSTTIHTNDLISKINELNLDNEISGIIVQLPLPSSIDKNKILSAVSP-SKDIDGFHPL----NVG 128 (288)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCc-ccccccCCcc----chh
Confidence 567999999987666653 2566666666 467899999999965321 111222221 1112222211 012
Q ss_pred eEE-EE-----eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHH
Q 012352 346 KLF-GY-----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRAR 418 (465)
Q Consensus 346 ~l~-G~-----NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~ 418 (465)
++. |. -.--.|++.-|+.. +.++.||+|+|+|-+ =.|+-++..|.+.|+.|+++.......+
T Consensus 129 ~l~~g~~~~~~PcTp~av~~lL~~y-----------~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~ 197 (288)
T PRK14171 129 YLHSGISQGFIPCTALGCLAVIKKY-----------EPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLS 197 (288)
T ss_pred hhhcCCCCCCcCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 221 11 11245666666653 257899999999998 5899999999999999999975433333
Q ss_pred HH
Q 012352 419 EL 420 (465)
Q Consensus 419 ~l 420 (465)
+.
T Consensus 198 ~~ 199 (288)
T PRK14171 198 SI 199 (288)
T ss_pred HH
Confidence 33
No 229
>PRK06046 alanine dehydrogenase; Validated
Probab=96.97 E-value=0.0015 Score=66.57 Aligned_cols=70 Identities=23% Similarity=0.266 Sum_probs=53.6
Q ss_pred CcEEEEEccchhHHHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHCCc----ccchhcccccCCCCeeEEEecCCCC
Q 012352 381 GKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELAETVGGH----ALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 381 ~k~vlV~GaGg~g~ai~~~L~~-~G~-~v~i~~R~~~~a~~la~~~~~~----~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
.+++.|+|+|+.|+..+.++.. .++ +|+|++|+.++++++++++... ....+++.+ .+. +|+|++|||..
T Consensus 129 ~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~-aDiVv~aTps~ 204 (326)
T PRK06046 129 SKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEE-ACD-CDILVTTTPSR 204 (326)
T ss_pred CCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHH-Hhh-CCEEEEecCCC
Confidence 4789999999999999998874 466 8999999999999999887421 111233333 234 89999999964
No 230
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.96 E-value=0.0022 Score=61.46 Aligned_cols=74 Identities=32% Similarity=0.390 Sum_probs=53.2
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---cccc------CCCC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPED 441 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---l~~~------~~~~ 441 (465)
+.+|+++|+|+ |++|++++..|.+.|++|+++.|+.++...+.+.+.. .. .++.+ +.+. ..+.
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 46789999997 6999999999999999999999998877766655431 11 12211 1110 2346
Q ss_pred eeEEEecCCCC
Q 012352 442 GMILANTTSIG 452 (465)
Q Consensus 442 ~DilInaT~~g 452 (465)
+|+||++++..
T Consensus 84 ~d~vi~~ag~~ 94 (251)
T PRK12826 84 LDILVANAGIF 94 (251)
T ss_pred CCEEEECCCCC
Confidence 89999998654
No 231
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.96 E-value=0.0062 Score=60.50 Aligned_cols=133 Identities=17% Similarity=0.247 Sum_probs=82.8
Q ss_pred HHHHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHHh--hhccccCHHHHhccceeeEEEecc
Q 012352 271 LYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAV--KCCDEVDTVAKSIGAVNCIIRRQS 343 (465)
Q Consensus 271 ~hn~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v~--~~~d~~~~~A~~~gavNtv~~~~~ 343 (465)
.-.+.++++|++.....++- +++.+.++.+ .++.+.|+.|..|.-..+- ..++.+++ .+.+...+..-
T Consensus 50 ~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p-~KDVDGl~~~N---- 124 (282)
T PRK14169 50 NKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDP-DKDVDGFSPVS---- 124 (282)
T ss_pred HHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhhcCc-ccCcccCChhh----
Confidence 33678999999987666654 2566777777 5778999999999653221 12222222 12222222210
Q ss_pred CCeEE-E----EeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHH
Q 012352 344 DGKLF-G----YNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRA 417 (465)
Q Consensus 344 ~g~l~-G----~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a 417 (465)
-|+++ | .-.--.|++.-|+.. +.++.||+|+|+|-+ =.|+-++..|.+.|+.|+++.......
T Consensus 125 ~g~l~~~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l 193 (282)
T PRK14169 125 VGRLWANEPTVVASTPYGIMALLDAY-----------DIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNL 193 (282)
T ss_pred hHHHhcCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCH
Confidence 01111 1 011245666666653 267899999999998 589999999999999999995433333
Q ss_pred HH
Q 012352 418 RE 419 (465)
Q Consensus 418 ~~ 419 (465)
++
T Consensus 194 ~~ 195 (282)
T PRK14169 194 KQ 195 (282)
T ss_pred HH
Confidence 33
No 232
>PRK07201 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.0024 Score=70.79 Aligned_cols=76 Identities=26% Similarity=0.396 Sum_probs=57.4
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchh---ccccc------CCC
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLA---DLENF------NPE 440 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~---~l~~~------~~~ 440 (465)
.+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++. ... .++. ++.+. ..+
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 447 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG 447 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 577899999998 599999999999999999999999999888877652 211 1221 11110 345
Q ss_pred CeeEEEecCCCCC
Q 012352 441 DGMILANTTSIGM 453 (465)
Q Consensus 441 ~~DilInaT~~gm 453 (465)
..|++||+++.+.
T Consensus 448 ~id~li~~Ag~~~ 460 (657)
T PRK07201 448 HVDYLVNNAGRSI 460 (657)
T ss_pred CCCEEEECCCCCC
Confidence 7899999998764
No 233
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.0021 Score=62.08 Aligned_cols=45 Identities=33% Similarity=0.444 Sum_probs=37.3
Q ss_pred CCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEE-CCHHHHHHHHHHH
Q 012352 380 AGKLFVVIGAG-GAGKALAYGAKAKGARVVIAN-RTYDRARELAETV 424 (465)
Q Consensus 380 ~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~-R~~~~a~~la~~~ 424 (465)
++|+++|+|++ |+|++++..|++.|++|++.. |+.++.+++..++
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~ 49 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEI 49 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHH
Confidence 47899999985 999999999999999998874 6677777666554
No 234
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.0011 Score=64.41 Aligned_cols=73 Identities=30% Similarity=0.246 Sum_probs=50.0
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchh---c-------ccccCCCCeeEE
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA---D-------LENFNPEDGMIL 445 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~---~-------l~~~~~~~~Dil 445 (465)
..+++|+++|+|+ ||+|++++..|++.|++|+++.|+.+.. ....+.....++. + +.+ ..+..|+|
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~v 81 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--LPEGVEFVAADLTTAEGCAAVARAVLE-RLGGVDIL 81 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--cCCceeEEecCCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence 3577899999998 5999999999999999999999986542 1111100011221 1 112 34678999
Q ss_pred EecCCCC
Q 012352 446 ANTTSIG 452 (465)
Q Consensus 446 InaT~~g 452 (465)
||+++..
T Consensus 82 i~~ag~~ 88 (260)
T PRK06523 82 VHVLGGS 88 (260)
T ss_pred EECCccc
Confidence 9998854
No 235
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=96.95 E-value=0.0019 Score=65.49 Aligned_cols=73 Identities=14% Similarity=0.171 Sum_probs=52.3
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHCC-c--c--cchh---cccccCCCCeeEEEe
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKG--ARVVIANRTYDRARELAETVGG-H--A--LSLA---DLENFNPEDGMILAN 447 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G--~~v~i~~R~~~~a~~la~~~~~-~--~--~~~~---~l~~~~~~~~DilIn 447 (465)
+++|++||+|+ |++|++++..|.+.| .+|++++|+..+...+.+.+.. . . .++. ++.+ .+.++|+|||
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~-~~~~iD~Vih 80 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTR-ALRGVDYVVH 80 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHH-HHhcCCEEEE
Confidence 35789999998 789999999999886 5899999987776666555532 1 1 1222 2323 3456899999
Q ss_pred cCCCC
Q 012352 448 TTSIG 452 (465)
Q Consensus 448 aT~~g 452 (465)
+++..
T Consensus 81 ~Ag~~ 85 (324)
T TIGR03589 81 AAALK 85 (324)
T ss_pred CcccC
Confidence 98764
No 236
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.94 E-value=0.0037 Score=60.52 Aligned_cols=72 Identities=26% Similarity=0.334 Sum_probs=53.7
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-c--c--cchhc---ccc----c--CCCCeeEE
Q 012352 381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-H--A--LSLAD---LEN----F--NPEDGMIL 445 (465)
Q Consensus 381 ~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~--~--~~~~~---l~~----~--~~~~~Dil 445 (465)
+|+++|+|+ |++|++++..|++.|++|++++|+.++++.+.+.+.. . . .++.+ +.. . ..+..|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 478999998 5999999999999999999999999998888876632 1 1 22211 111 0 23468999
Q ss_pred EecCCCC
Q 012352 446 ANTTSIG 452 (465)
Q Consensus 446 InaT~~g 452 (465)
|++++..
T Consensus 82 i~~ag~~ 88 (257)
T PRK07074 82 VANAGAA 88 (257)
T ss_pred EECCCCC
Confidence 9999764
No 237
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=96.93 E-value=0.0058 Score=61.13 Aligned_cols=134 Identities=17% Similarity=0.214 Sum_probs=82.6
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHHh--hhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAV--KCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v~--~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+.++++|++..-..++- +++.+.++.+ .++++.|+.|.+|.-..+- ..++.+++ .+.+...+..- -|
T Consensus 61 ~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvq~PlP~~id~~~i~~~I~p-~KDVDGl~~~n----~g 135 (299)
T PLN02516 61 RKACAEVGIKSFDVDLPENISEAELISKVHELNANPDVHGILVQLPLPKHINEEKILNEISL-EKDVDGFHPLN----IG 135 (299)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCcCHHHHHhccCc-ccccCccCHhh----Hh
Confidence 567899999976555532 3577777777 5789999999999642211 11111111 11111111110 12
Q ss_pred eEE-E--E----eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHH
Q 012352 346 KLF-G--Y----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRA 417 (465)
Q Consensus 346 ~l~-G--~----NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a 417 (465)
++. | . -.--.|++.-|+.. +.++.||+|+|+|-+ =.|+-++..|.+.|+.|+++.......
T Consensus 136 ~l~~~~~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl 204 (299)
T PLN02516 136 KLAMKGREPLFLPCTPKGCLELLSRS-----------GIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDP 204 (299)
T ss_pred hHhcCCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCH
Confidence 222 1 0 11245666666652 367899999999998 589999999999999999996654444
Q ss_pred HHHHH
Q 012352 418 RELAE 422 (465)
Q Consensus 418 ~~la~ 422 (465)
++...
T Consensus 205 ~~~~~ 209 (299)
T PLN02516 205 ESIVR 209 (299)
T ss_pred HHHHh
Confidence 44443
No 238
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.92 E-value=0.0057 Score=60.74 Aligned_cols=132 Identities=22% Similarity=0.317 Sum_probs=82.0
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHH--hhhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v--~~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+..+++|++.....+.- +++.+.++.+ .++.+.|+.|..|.-..+ ...++.+++ .+.+...+.+- -|
T Consensus 53 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p-~KDVDGl~p~N----~g 127 (284)
T PRK14170 53 QKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISY-DKDVDGFHPVN----VG 127 (284)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCc-ccCcccCChhh----hh
Confidence 567899999987666554 2566677777 577899999999964321 111222222 12222222210 01
Q ss_pred eEE-EE----eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHH
Q 012352 346 KLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARE 419 (465)
Q Consensus 346 ~l~-G~----NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~ 419 (465)
+++ |. -.--.|++.-|+.. +.++.||+|+|+|-| =.|+-++..|.+.|+.|+++.......++
T Consensus 128 ~l~~~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~ 196 (284)
T PRK14170 128 NLFIGKDSFVPCTPAGIIELIKST-----------GTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQ 196 (284)
T ss_pred HHhCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence 111 11 11146666666653 367899999999998 58999999999999999998654443343
Q ss_pred H
Q 012352 420 L 420 (465)
Q Consensus 420 l 420 (465)
.
T Consensus 197 ~ 197 (284)
T PRK14170 197 V 197 (284)
T ss_pred H
Confidence 3
No 239
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.91 E-value=0.0059 Score=61.07 Aligned_cols=133 Identities=22% Similarity=0.278 Sum_probs=82.9
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHH--hhhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v--~~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+.++++|++..-..++. +++.+.++.+ .++.+.|+.|..|.-..+ ...++.+++ -+.+...+..- -|
T Consensus 54 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p-~KDVDGl~~~n----~g 128 (297)
T PRK14186 54 EKACARVGIASFGKHLPADTSQAEVEALIAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDP-DKDADGLHPLN----LG 128 (297)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCc-ccCcccCChhh----HH
Confidence 567899999986555532 3677777777 577899999999974322 112222221 11122222110 01
Q ss_pred eE-EEE----eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHH
Q 012352 346 KL-FGY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARE 419 (465)
Q Consensus 346 ~l-~G~----NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~ 419 (465)
++ .|. -.--.|++.-|+.. +.++.||+|+|+|-+ =.|+-++..|.+.|+.|+++.......++
T Consensus 129 ~l~~~~~~~~PcTp~aii~lL~~~-----------~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~ 197 (297)
T PRK14186 129 RLVKGEPGLRSCTPAGVMRLLRSQ-----------QIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLAS 197 (297)
T ss_pred HHhCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence 11 111 12256677766653 267899999999998 58999999999999999999654444444
Q ss_pred HH
Q 012352 420 LA 421 (465)
Q Consensus 420 la 421 (465)
..
T Consensus 198 ~~ 199 (297)
T PRK14186 198 IT 199 (297)
T ss_pred HH
Confidence 43
No 240
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=96.89 E-value=0.0015 Score=66.12 Aligned_cols=72 Identities=19% Similarity=0.228 Sum_probs=48.0
Q ss_pred CcEEEEEccchhHHHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHCC---cccchhcccccCCCCeeEEEecCCCCC
Q 012352 381 GKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELAETVGG---HALSLADLENFNPEDGMILANTTSIGM 453 (465)
Q Consensus 381 ~k~vlV~GaGg~g~ai~~~L~~-~G~-~v~i~~R~~~~a~~la~~~~~---~~~~~~~l~~~~~~~~DilInaT~~gm 453 (465)
.+++.|+|+|.-|+.-+.++.. ++. +|.|++|++++++++++++.. .....++.++ .+.++|+||.||+...
T Consensus 128 ~~~l~viGaG~QA~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~~~~~~~-av~~aDii~taT~s~~ 204 (313)
T PF02423_consen 128 ARTLGVIGAGVQARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVAVDSAEE-AVRGADIIVTATPSTT 204 (313)
T ss_dssp --EEEEE--SHHHHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEEESSHHH-HHTTSSEEEE----SS
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhccccccceeccchhh-hcccCCEEEEccCCCC
Confidence 4689999999999998888765 567 999999999999999998865 1122234444 4678999999999875
No 241
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.88 E-value=0.002 Score=65.79 Aligned_cols=70 Identities=24% Similarity=0.307 Sum_probs=49.7
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCCC
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
..+.+|++.|+|.|.+|+.++..|...|++|++++|+..... ...++.... ++.+ .+.++|+|+.++|..
T Consensus 146 ~~L~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~--~~~~~~~~~---~l~e-ll~~aDiV~l~lP~t 215 (333)
T PRK13243 146 YDVYGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPEA--EKELGAEYR---PLEE-LLRESDFVSLHVPLT 215 (333)
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChhh--HHHcCCEec---CHHH-HHhhCCEEEEeCCCC
Confidence 467899999999999999999999999999999999865432 222332212 2222 234567777777653
No 242
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=96.88 E-value=0.0033 Score=60.33 Aligned_cols=73 Identities=19% Similarity=0.238 Sum_probs=49.2
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEE-ECCHHHHHHHHHHH---CCcc----cchh---ccccc------CCCC
Q 012352 380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETV---GGHA----LSLA---DLENF------NPED 441 (465)
Q Consensus 380 ~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~-~R~~~~a~~la~~~---~~~~----~~~~---~l~~~------~~~~ 441 (465)
++|.++|+|+ ||+|++++..|++.|++|++. .|+..+.++..+++ +... .++. ++.+. ..+.
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4789999998 699999999999999987774 55666555555443 2111 2221 11110 2457
Q ss_pred eeEEEecCCCC
Q 012352 442 GMILANTTSIG 452 (465)
Q Consensus 442 ~DilInaT~~g 452 (465)
.|+|||+++..
T Consensus 82 id~li~~ag~~ 92 (246)
T PRK12938 82 IDVLVNNAGIT 92 (246)
T ss_pred CCEEEECCCCC
Confidence 89999999764
No 243
>PRK06823 ornithine cyclodeaminase; Validated
Probab=96.87 E-value=0.0028 Score=64.20 Aligned_cols=71 Identities=11% Similarity=0.072 Sum_probs=54.7
Q ss_pred CcEEEEEccchhHHHHHHHHHHC-CC-eEEEEECCHHHHHHHHHHHCC---cccchhcccccCCCCeeEEEecCCCC
Q 012352 381 GKLFVVIGAGGAGKALAYGAKAK-GA-RVVIANRTYDRARELAETVGG---HALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 381 ~k~vlV~GaGg~g~ai~~~L~~~-G~-~v~i~~R~~~~a~~la~~~~~---~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
.+++.|+|+|..|+.-+.++... .. +|+|+||++++++++++.+.. .....++..+ ...++|+|+.||+..
T Consensus 128 ~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~-av~~ADIV~taT~s~ 203 (315)
T PRK06823 128 VSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTTLDAAE-VAHAANLIVTTTPSR 203 (315)
T ss_pred CCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEECCHHH-HhcCCCEEEEecCCC
Confidence 57899999999999988887654 45 899999999999999887642 1112233444 467899999999865
No 244
>PRK08264 short chain dehydrogenase; Validated
Probab=96.87 E-value=0.0018 Score=61.79 Aligned_cols=70 Identities=30% Similarity=0.448 Sum_probs=50.4
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCc--c--cchh---ccccc--CCCCeeEEEe
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH--A--LSLA---DLENF--NPEDGMILAN 447 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~--~--~~~~---~l~~~--~~~~~DilIn 447 (465)
+.+++++|+|+ |++|++++..|.+.|+ +|+++.|+.++.++ .+.. . .++. ++.+. .....|+||+
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 79 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTILVN 79 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence 46789999997 7999999999999999 99999999887654 2211 1 1221 11110 2346899999
Q ss_pred cCCCC
Q 012352 448 TTSIG 452 (465)
Q Consensus 448 aT~~g 452 (465)
+++..
T Consensus 80 ~ag~~ 84 (238)
T PRK08264 80 NAGIF 84 (238)
T ss_pred CCCcC
Confidence 99873
No 245
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.86 E-value=0.0041 Score=60.32 Aligned_cols=76 Identities=24% Similarity=0.306 Sum_probs=50.0
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHH--HHHHHHHHHCCcc----cchh---ccccc------CCC
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD--RARELAETVGGHA----LSLA---DLENF------NPE 440 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~--~a~~la~~~~~~~----~~~~---~l~~~------~~~ 440 (465)
.++++|+++|+|+ ||+|++++..|++.|++|++++|+.. ..+++. ..+... .++. ++.++ ..+
T Consensus 6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK08993 6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT-ALGRRFLSLTADLRKIDGIPALLERAVAEFG 84 (253)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 3577899999998 49999999999999999988887532 122222 223211 1221 11110 345
Q ss_pred CeeEEEecCCCCC
Q 012352 441 DGMILANTTSIGM 453 (465)
Q Consensus 441 ~~DilInaT~~gm 453 (465)
..|++||+++...
T Consensus 85 ~~D~li~~Ag~~~ 97 (253)
T PRK08993 85 HIDILVNNAGLIR 97 (253)
T ss_pred CCCEEEECCCCCC
Confidence 7899999998653
No 246
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=96.86 E-value=0.0026 Score=64.11 Aligned_cols=72 Identities=21% Similarity=0.307 Sum_probs=55.9
Q ss_pred CCcEEEEEccchhHHHHHHHHHHC-CC-eEEEEECCHHHHHHHHHHHCCc----ccchhcccccCCCCeeEEEecCCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAK-GA-RVVIANRTYDRARELAETVGGH----ALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~-G~-~v~i~~R~~~~a~~la~~~~~~----~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
..+++.|+|+|.-|+.-+.++... .. +|.||+|++++++++++++... ....++..+ ...++|+|+.+|+..
T Consensus 116 da~~l~iiGaG~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~e-av~~aDIV~taT~s~ 193 (301)
T PRK06407 116 NVENFTIIGSGFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEA-ALRDADTITSITNSD 193 (301)
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHH-HHhcCCEEEEecCCC
Confidence 358999999999999888887754 56 8999999999999999887532 112233444 467899999999865
No 247
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0036 Score=60.78 Aligned_cols=73 Identities=34% Similarity=0.444 Sum_probs=52.9
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---ccc----c--CCCCeeE
Q 012352 382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LEN----F--NPEDGMI 444 (465)
Q Consensus 382 k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---l~~----~--~~~~~Di 444 (465)
++++|+|+ |++|++++..|.+.|++|++++|+.++.+++.+.+. ... .++.+ +.. . ..+..|+
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 81 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI 81 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 67999998 699999999999999999999999988887766553 111 12211 111 0 2356899
Q ss_pred EEecCCCCCC
Q 012352 445 LANTTSIGMQ 454 (465)
Q Consensus 445 lInaT~~gm~ 454 (465)
|||+++....
T Consensus 82 vi~~ag~~~~ 91 (263)
T PRK06181 82 LVNNAGITMW 91 (263)
T ss_pred EEECCCcccc
Confidence 9999976543
No 248
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=96.86 E-value=0.002 Score=61.50 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=33.3
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECC
Q 012352 378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT 413 (465)
Q Consensus 378 ~l~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~ 413 (465)
.+++++|+|+|+||+|..++..|+..|. ++++++.+
T Consensus 25 ~L~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 25 KLKKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred HHhCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 3667899999999999999999999999 89999987
No 249
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.0032 Score=60.51 Aligned_cols=75 Identities=29% Similarity=0.310 Sum_probs=51.4
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHHC---Ccc----cchh---cccc------cCCC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETVG---GHA----LSLA---DLEN------FNPE 440 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~-~~a~~la~~~~---~~~----~~~~---~l~~------~~~~ 440 (465)
+++|+++|+|+ ||+|++++..|.+.|++|+++.|+. ++.+.+.+++. ... .++. ++.. ...+
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG 83 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 56789999998 6999999999999999999999975 34555555442 111 1221 1111 0235
Q ss_pred CeeEEEecCCCCC
Q 012352 441 DGMILANTTSIGM 453 (465)
Q Consensus 441 ~~DilInaT~~gm 453 (465)
..|+||++++...
T Consensus 84 ~~d~vi~~ag~~~ 96 (248)
T PRK07806 84 GLDALVLNASGGM 96 (248)
T ss_pred CCcEEEECCCCCC
Confidence 6899999987653
No 250
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.85 E-value=0.0064 Score=60.50 Aligned_cols=135 Identities=19% Similarity=0.243 Sum_probs=84.6
Q ss_pred HHHHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHHh--hhccccCHHHHhccceeeEEEecc
Q 012352 271 LYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAV--KCCDEVDTVAKSIGAVNCIIRRQS 343 (465)
Q Consensus 271 ~hn~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v~--~~~d~~~~~A~~~gavNtv~~~~~ 343 (465)
.-.+.++++|++.....++- +++.+.++.+ .++.+.|+.|..|.-..+- ..++.+++ -+.+...+..-
T Consensus 46 ~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~d~~V~GIlvqlPlP~~i~~~~i~~~I~p-~KDVDGl~p~n---- 120 (287)
T PRK14181 46 MKVKKATDLGMVSKAHRLPSDATLSDILKLIHRLNNDPNIHGILVQLPLPKHLDAQAILQAISP-DKDVDGLHPVN---- 120 (287)
T ss_pred HHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCcCHHHHHhccCc-ccCcccCChhh----
Confidence 33678999999987666653 2677777777 5779999999999643221 12222222 12222222210
Q ss_pred CCeEE-EE-----eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHC----CCeEEEEEC
Q 012352 344 DGKLF-GY-----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAK----GARVVIANR 412 (465)
Q Consensus 344 ~g~l~-G~-----NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~----G~~v~i~~R 412 (465)
-|+++ |. -.--.|++..|+.. +.++.||+|+|+|-+ =.|+-++..|.+. ++.|+++.+
T Consensus 121 ~g~l~~g~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs 189 (287)
T PRK14181 121 MGKLLLGETDGFIPCTPAGIIELLKYY-----------EIPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHS 189 (287)
T ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCC
Confidence 11221 21 11245666666653 267899999999998 5899999999988 789999975
Q ss_pred CHHHHHHHH
Q 012352 413 TYDRARELA 421 (465)
Q Consensus 413 ~~~~a~~la 421 (465)
.....++..
T Consensus 190 ~T~~l~~~~ 198 (287)
T PRK14181 190 QSENLTEIL 198 (287)
T ss_pred CCCCHHHHH
Confidence 444444433
No 251
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.0033 Score=61.29 Aligned_cols=73 Identities=15% Similarity=0.121 Sum_probs=51.2
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCC-CeEEEEECCHHH-HHHHHHHHC---C-c--c--cchhc---c----ccc-CCC
Q 012352 380 AGKLFVVIGA-GGAGKALAYGAKAKG-ARVVIANRTYDR-ARELAETVG---G-H--A--LSLAD---L----ENF-NPE 440 (465)
Q Consensus 380 ~~k~vlV~Ga-Gg~g~ai~~~L~~~G-~~v~i~~R~~~~-a~~la~~~~---~-~--~--~~~~~---l----~~~-~~~ 440 (465)
.+++++|+|+ ||+|++++..|++.| ++|+++.|+.++ .+++.+++. . . . .++.+ + .+. ..+
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 3678999998 599999999999986 799999999876 676666552 1 1 1 12211 1 110 125
Q ss_pred CeeEEEecCCCC
Q 012352 441 DGMILANTTSIG 452 (465)
Q Consensus 441 ~~DilInaT~~g 452 (465)
+.|++||+++..
T Consensus 87 ~id~li~~ag~~ 98 (253)
T PRK07904 87 DVDVAIVAFGLL 98 (253)
T ss_pred CCCEEEEeeecC
Confidence 799999988764
No 252
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=96.83 E-value=0.0029 Score=63.90 Aligned_cols=70 Identities=26% Similarity=0.345 Sum_probs=52.4
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCC
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~ 451 (465)
..+++|++.|+|-|.+|++++..|...|++|++++|. .+..+.+...+....++ .+ ...++|+|+...|.
T Consensus 12 ~~LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~-~~s~~~A~~~G~~v~sl---~E-aak~ADVV~llLPd 81 (335)
T PRK13403 12 ELLQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRP-GKSFEVAKADGFEVMSV---SE-AVRTAQVVQMLLPD 81 (335)
T ss_pred hhhCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECc-chhhHHHHHcCCEECCH---HH-HHhcCCEEEEeCCC
Confidence 3478999999999999999999999999999999986 44445555544433333 33 34567888888874
No 253
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.83 E-value=0.0035 Score=60.72 Aligned_cols=73 Identities=26% Similarity=0.392 Sum_probs=49.6
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC-HHHHHHHHHHHCCcc--cchh---cc-------cccCCCCee
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETVGGHA--LSLA---DL-------ENFNPEDGM 443 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~-~~~a~~la~~~~~~~--~~~~---~l-------~~~~~~~~D 443 (465)
.+++|+++|+|+ ||+|++++..|++.|++|++..|+ .+.++++.+. +... .++. ++ .+ ..++.|
T Consensus 4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~-~~~~~~~Dl~~~~~~~~~~~~~~~-~~~~id 81 (255)
T PRK06463 4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK-GVFTIKCDVGNRDQVKKSKEVVEK-EFGRVD 81 (255)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhC-CCeEEEecCCCHHHHHHHHHHHHH-HcCCCC
Confidence 356899999998 599999999999999998887554 4444444432 2111 1221 11 11 245789
Q ss_pred EEEecCCCC
Q 012352 444 ILANTTSIG 452 (465)
Q Consensus 444 ilInaT~~g 452 (465)
+|||+++..
T Consensus 82 ~li~~ag~~ 90 (255)
T PRK06463 82 VLVNNAGIM 90 (255)
T ss_pred EEEECCCcC
Confidence 999999875
No 254
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.82 E-value=0.01 Score=59.16 Aligned_cols=133 Identities=18% Similarity=0.299 Sum_probs=81.2
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHH--hhhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v--~~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+.++++|++.....++- +++.+.++.+ .++.+.|+.|..|.-..+ ...++.+++ .+.+...+.+ .-|
T Consensus 53 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p-~KDVDGl~~~----N~g 127 (293)
T PRK14185 53 VKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDDVDGFIVQLPLPKHISEQKVIEAIDY-RKDVDGFHPI----NVG 127 (293)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCc-ccCcCCCCHh----hHH
Confidence 568999999987655543 2566667777 577899999999975221 111211111 1111111111 001
Q ss_pred eEE-EE----eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHC----CCeEEEEECCHH
Q 012352 346 KLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAK----GARVVIANRTYD 415 (465)
Q Consensus 346 ~l~-G~----NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~----G~~v~i~~R~~~ 415 (465)
+++ |. -.--.|++.-|+.. +.++.||+|+|+|-+ =.|+-++..|.+. ++.|+++.....
T Consensus 128 ~l~~~~~~~~PcTp~av~~lL~~~-----------~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~ 196 (293)
T PRK14185 128 RMSIGLPCFVSATPNGILELLKRY-----------HIETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSK 196 (293)
T ss_pred HHhCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCC
Confidence 221 11 11246666666653 257899999999998 5999999999988 579999965444
Q ss_pred HHHHHH
Q 012352 416 RARELA 421 (465)
Q Consensus 416 ~a~~la 421 (465)
...+..
T Consensus 197 nl~~~~ 202 (293)
T PRK14185 197 NLKKEC 202 (293)
T ss_pred CHHHHH
Confidence 444443
No 255
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.005 Score=59.76 Aligned_cols=73 Identities=22% Similarity=0.353 Sum_probs=50.7
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH---CCcc----cchh---cc-------cccCCC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA----LSLA---DL-------ENFNPE 440 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~---~~~~----~~~~---~l-------~~~~~~ 440 (465)
+.+|+++|+|+ ||+|++++..|.+.|++|++++|+.+. .+..+++ +... .++. ++ .+ ..+
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~~ 81 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKE-KEG 81 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence 56799999997 599999999999999999999998753 3333333 2111 1221 11 11 345
Q ss_pred CeeEEEecCCCCC
Q 012352 441 DGMILANTTSIGM 453 (465)
Q Consensus 441 ~~DilInaT~~gm 453 (465)
..|+||++++...
T Consensus 82 ~id~vi~~ag~~~ 94 (263)
T PRK08226 82 RIDILVNNAGVCR 94 (263)
T ss_pred CCCEEEECCCcCC
Confidence 7899999998643
No 256
>PRK08017 oxidoreductase; Provisional
Probab=96.82 E-value=0.0046 Score=59.64 Aligned_cols=72 Identities=28% Similarity=0.367 Sum_probs=51.2
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---cc----cc---CCCCeeEEEec
Q 012352 382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LE----NF---NPEDGMILANT 448 (465)
Q Consensus 382 k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---l~----~~---~~~~~DilIna 448 (465)
|+++|+|+ |++|++++..|++.|++|+++.|+.++.+.+.+ .+... .++.+ +. .. ..+..|.+||+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-LGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 68999999 899999999999999999999999988766543 23221 12211 11 10 12467999999
Q ss_pred CCCCCC
Q 012352 449 TSIGMQ 454 (465)
Q Consensus 449 T~~gm~ 454 (465)
++.+..
T Consensus 82 ag~~~~ 87 (256)
T PRK08017 82 AGFGVY 87 (256)
T ss_pred CCCCCc
Confidence 987653
No 257
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.82 E-value=0.0039 Score=59.55 Aligned_cols=74 Identities=38% Similarity=0.506 Sum_probs=53.8
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEE-ECCHHHHHHHHHHHCC---cc----cchhc---cccc------CCC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVGG---HA----LSLAD---LENF------NPE 440 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~-~R~~~~a~~la~~~~~---~~----~~~~~---l~~~------~~~ 440 (465)
+.+|+++|+|+ |++|+.++..|++.|++|+++ +|+.++.+.+.+.+.. .. .++.+ +... ..+
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG 82 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 55789999998 799999999999999999888 9998888777665431 11 12221 1110 234
Q ss_pred CeeEEEecCCCC
Q 012352 441 DGMILANTTSIG 452 (465)
Q Consensus 441 ~~DilInaT~~g 452 (465)
..|+||++++..
T Consensus 83 ~id~vi~~ag~~ 94 (247)
T PRK05565 83 KIDILVNNAGIS 94 (247)
T ss_pred CCCEEEECCCcC
Confidence 689999998865
No 258
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.0036 Score=59.48 Aligned_cols=72 Identities=24% Similarity=0.285 Sum_probs=49.7
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---cc---c-cCCCCeeEEEecCCC
Q 012352 382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LE---N-FNPEDGMILANTTSI 451 (465)
Q Consensus 382 k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---l~---~-~~~~~~DilInaT~~ 451 (465)
|+++|+|+ ||+|++++..|++.|++|++++|++++.+++.+.-+... .++.+ +. + ..-.+.|+||++++.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~ 81 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI 81 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence 57999997 699999999999999999999999877665533211111 22221 11 1 111368999999987
Q ss_pred CC
Q 012352 452 GM 453 (465)
Q Consensus 452 gm 453 (465)
..
T Consensus 82 ~~ 83 (225)
T PRK08177 82 SG 83 (225)
T ss_pred cC
Confidence 53
No 259
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=96.82 E-value=0.0037 Score=67.16 Aligned_cols=48 Identities=31% Similarity=0.304 Sum_probs=41.6
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc
Q 012352 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH 427 (465)
Q Consensus 379 l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~ 427 (465)
..+.+|+|+|+|.+|..++..++..|++|+++++++++.+ .++++|..
T Consensus 163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle-~aeslGA~ 210 (509)
T PRK09424 163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAE-QVESMGAE 210 (509)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCe
Confidence 3478999999999999999999999999999999998855 55667765
No 260
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.80 E-value=0.011 Score=58.69 Aligned_cols=131 Identities=17% Similarity=0.265 Sum_probs=81.1
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHH--hhhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v--~~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+.++++|++.....++- +++.+.++.+ .++.+.|+.|.+|.-..+ ...++.+++ .+.+...+..- -|
T Consensus 54 ~k~a~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIlvqlPlP~~id~~~i~~~I~p-~KDVDGl~~~n----~g 128 (284)
T PRK14193 54 HRDCAEVGITSIRRDLPADATQEELNAVIDELNADPACTGYIVQLPLPKHLDENAVLERIDP-AKDADGLHPTN----LG 128 (284)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCc-ccCccCCChhh----hh
Confidence 567899999987666553 3566667777 567899999999974211 111111111 11122222210 01
Q ss_pred eEE-E----EeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHH--CCCeEEEEECCHHHH
Q 012352 346 KLF-G----YNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKA--KGARVVIANRTYDRA 417 (465)
Q Consensus 346 ~l~-G----~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~--~G~~v~i~~R~~~~a 417 (465)
+++ | .-.--.|++.-|+.. +.++.||+|+|+|.+ -.|+-++..|.+ .++.|+++.+.....
T Consensus 129 ~l~~~~~~~~PcTp~av~~ll~~~-----------~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l 197 (284)
T PRK14193 129 RLVLNEPAPLPCTPRGIVHLLRRY-----------DVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDL 197 (284)
T ss_pred HHhCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCH
Confidence 121 1 112246666666653 267899999999998 589999999988 688999997654433
Q ss_pred HH
Q 012352 418 RE 419 (465)
Q Consensus 418 ~~ 419 (465)
++
T Consensus 198 ~~ 199 (284)
T PRK14193 198 AA 199 (284)
T ss_pred HH
Confidence 33
No 261
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.79 E-value=0.0037 Score=60.11 Aligned_cols=74 Identities=24% Similarity=0.384 Sum_probs=51.8
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEE-ECCHHHHHHHHHHHCCcc----cchh---ccccc------CCCC-e
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVGGHA----LSLA---DLENF------NPED-G 442 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~-~R~~~~a~~la~~~~~~~----~~~~---~l~~~------~~~~-~ 442 (465)
+++|+++|+|+ ||+|++++..|.+.|++|++. .|+.++.+.+.++++... .|+. ++.++ ..+. .
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i 82 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPI 82 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 45789999997 599999999999999988775 567777777777665321 1221 11110 2234 8
Q ss_pred eEEEecCCCC
Q 012352 443 MILANTTSIG 452 (465)
Q Consensus 443 DilInaT~~g 452 (465)
|++||+++..
T Consensus 83 d~li~~ag~~ 92 (253)
T PRK08642 83 TTVVNNALAD 92 (253)
T ss_pred eEEEECCCcc
Confidence 9999999753
No 262
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.78 E-value=0.008 Score=60.12 Aligned_cols=132 Identities=18% Similarity=0.238 Sum_probs=83.2
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHH--hhhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v--~~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+.++++|++.....++- +++.+.++.+ .++.+.|+.|.+|.-..+ ...++.+++ -+.+...+..- -|
T Consensus 53 ~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p-~KDVDGl~~~n----~g 127 (297)
T PRK14167 53 QRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADEDVHGILVQMPVPDHVDDREVLRRIDP-AKDVDGFHPEN----VG 127 (297)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCc-ccCcccCChhh----hH
Confidence 668999999987766654 2577777777 577899999999965321 112222222 12222222220 11
Q ss_pred eEE-EEe----ccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHC----CCeEEEEECCHH
Q 012352 346 KLF-GYN----TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAK----GARVVIANRTYD 415 (465)
Q Consensus 346 ~l~-G~N----TD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~----G~~v~i~~R~~~ 415 (465)
+++ |.+ .--.|++.-|+.. +.++.||+|+|+|-+ =.|+-++..|.+. ++.|+++.....
T Consensus 128 ~l~~g~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~ 196 (297)
T PRK14167 128 RLVAGDARFKPCTPHGIQKLLAAA-----------GVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTD 196 (297)
T ss_pred HHhCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCC
Confidence 221 111 2246667766653 257899999999998 5899999999887 789999965444
Q ss_pred HHHHH
Q 012352 416 RAREL 420 (465)
Q Consensus 416 ~a~~l 420 (465)
..++.
T Consensus 197 ~l~~~ 201 (297)
T PRK14167 197 DLAAK 201 (297)
T ss_pred CHHHH
Confidence 33333
No 263
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=96.78 E-value=0.0093 Score=60.91 Aligned_cols=133 Identities=22% Similarity=0.271 Sum_probs=81.6
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHH--hhhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v--~~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+..+++|++..-..+.- +++.+.++.+ .++.+.|+.|..|.-..+ ...++.+++ -+.+...+..- -|
T Consensus 125 ~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~D~~V~GIlVQlPLP~~id~~~i~~aI~P-~KDVDGl~p~N----~G 199 (364)
T PLN02616 125 KKACDSVGINSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSHMDEQNILNAVSI-EKDVDGFHPLN----IG 199 (364)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCc-ccCcccCChhh----hH
Confidence 567999999976444433 2566777777 567899999999975321 111111111 11111111110 01
Q ss_pred eEE-EE------eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHH
Q 012352 346 KLF-GY------NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRA 417 (465)
Q Consensus 346 ~l~-G~------NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a 417 (465)
++. |. -.--.|++.-|+.. +.+++||+|+|+|-+ =.|+-++..|.+.|+.|+++.......
T Consensus 200 ~L~~g~~~~~f~PCTp~avielL~~y-----------~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl 268 (364)
T PLN02616 200 RLAMRGREPLFVPCTPKGCIELLHRY-----------NVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP 268 (364)
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCH
Confidence 221 10 11246677767653 267899999999998 599999999999999999996544444
Q ss_pred HHHH
Q 012352 418 RELA 421 (465)
Q Consensus 418 ~~la 421 (465)
++..
T Consensus 269 ~~~~ 272 (364)
T PLN02616 269 EEIT 272 (364)
T ss_pred HHHH
Confidence 4443
No 264
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.77 E-value=0.0034 Score=67.19 Aligned_cols=74 Identities=20% Similarity=0.248 Sum_probs=52.5
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCCC
Q 012352 378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 378 ~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
.+.+|+|+|+|.||+|++++..|.+.|++|++++|+.....++.++++.....-..-.+ .+.++|+||-+.++.
T Consensus 12 ~~~~~~v~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~-~~~~~d~vV~Spgi~ 85 (473)
T PRK00141 12 QELSGRVLVAGAGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEASD-QLDSFSLVVTSPGWR 85 (473)
T ss_pred cccCCeEEEEccCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCchh-HhcCCCEEEeCCCCC
Confidence 46688999999999999999999999999999999877655554554432211101111 234678888876665
No 265
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.76 E-value=0.0021 Score=66.24 Aligned_cols=36 Identities=28% Similarity=0.377 Sum_probs=33.2
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCH
Q 012352 379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY 414 (465)
Q Consensus 379 l~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~~ 414 (465)
+++++|+|+|+||.|..++..|+..|+ ++++++.+.
T Consensus 26 L~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 26 LFDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 567899999999999999999999999 999998764
No 266
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.76 E-value=0.0037 Score=62.96 Aligned_cols=70 Identities=17% Similarity=0.194 Sum_probs=50.6
Q ss_pred CcEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCCC
Q 012352 381 GKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 381 ~k~vlV~GaGg~g~ai~~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
.+++.|+|+|.+|.+++..|.+.|. +|++++|++++.+.+. ..+.......+..+ .+.++|+||.|+|..
T Consensus 6 ~~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~-~~g~~~~~~~~~~~-~~~~aDvViiavp~~ 77 (307)
T PRK07502 6 FDRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARAR-ELGLGDRVTTSAAE-AVKGADLVILCVPVG 77 (307)
T ss_pred CcEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH-hCCCCceecCCHHH-HhcCCCEEEECCCHH
Confidence 3689999999999999999999985 8999999988766543 33321111112222 345789999999875
No 267
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=96.76 E-value=0.0035 Score=62.99 Aligned_cols=41 Identities=20% Similarity=0.295 Sum_probs=37.7
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET 423 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~ 423 (465)
++.|+|.|.+|.+++..|.+.|.+|+++||++++.+.+.+.
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~ 42 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKED 42 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence 58899999999999999999999999999999998888753
No 268
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.0069 Score=58.20 Aligned_cols=42 Identities=29% Similarity=0.409 Sum_probs=37.9
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 012352 382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAET 423 (465)
Q Consensus 382 k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~ 423 (465)
++++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~ 44 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ 44 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh
Confidence 57999987 6999999999999999999999999988887664
No 269
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=96.76 E-value=0.0025 Score=65.25 Aligned_cols=37 Identities=38% Similarity=0.518 Sum_probs=33.7
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCH
Q 012352 378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY 414 (465)
Q Consensus 378 ~l~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~~ 414 (465)
.+.+++|+|+|+||+|..++..|+..|. +|++++++.
T Consensus 21 ~L~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 21 KLREKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred HhcCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 3567899999999999999999999999 999999873
No 270
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.0062 Score=59.87 Aligned_cols=75 Identities=25% Similarity=0.368 Sum_probs=54.0
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCCC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPED 441 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---l~~~------~~~~ 441 (465)
.+.|+++|+|+ |++|++++..|.+.|++|+++.|+.++.+++.+++. ... .++.+ +..+ ..+.
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 45689999998 699999999999999999999999888777665542 211 12211 1110 2456
Q ss_pred eeEEEecCCCCC
Q 012352 442 GMILANTTSIGM 453 (465)
Q Consensus 442 ~DilInaT~~gm 453 (465)
.|+||++++...
T Consensus 88 id~vi~~Ag~~~ 99 (274)
T PRK07775 88 IEVLVSGAGDTY 99 (274)
T ss_pred CCEEEECCCcCC
Confidence 899999998654
No 271
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.74 E-value=0.0053 Score=59.13 Aligned_cols=71 Identities=24% Similarity=0.332 Sum_probs=51.7
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---ccc----c--CCCCeeE
Q 012352 382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LEN----F--NPEDGMI 444 (465)
Q Consensus 382 k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---l~~----~--~~~~~Di 444 (465)
|+++|+|+ |++|++++..|.+.|++|+++.|+.++.+++.+++.. .. .++.+ +.+ . ..+..|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 57999997 6999999999999999999999998888777665531 11 12211 111 0 2456899
Q ss_pred EEecCCCC
Q 012352 445 LANTTSIG 452 (465)
Q Consensus 445 lInaT~~g 452 (465)
|||+++..
T Consensus 81 vi~~ag~~ 88 (254)
T TIGR02415 81 MVNNAGVA 88 (254)
T ss_pred EEECCCcC
Confidence 99999764
No 272
>PRK12746 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.0038 Score=60.26 Aligned_cols=46 Identities=37% Similarity=0.508 Sum_probs=38.7
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEE-ECCHHHHHHHHHHH
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETV 424 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~-~R~~~~a~~la~~~ 424 (465)
+++++++|+|+ |++|++++..|.+.|++|.+. .|+.++.+++.+.+
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~ 51 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREI 51 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 56789999998 699999999999999988774 79888877776655
No 273
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.0034 Score=60.79 Aligned_cols=76 Identities=26% Similarity=0.340 Sum_probs=54.3
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCe-EEEEECCHHHHHHHHHHHC---Ccc----cchh---ccccc------CC
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVG---GHA----LSLA---DLENF------NP 439 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~-v~i~~R~~~~a~~la~~~~---~~~----~~~~---~l~~~------~~ 439 (465)
.+++|+++|+|+ |++|+.++..|.+.|++ |++++|+.++...+.+.+. ... .++. ++.+. ..
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF 82 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 356899999998 59999999999999997 9999999887776665542 111 1221 11110 23
Q ss_pred CCeeEEEecCCCCC
Q 012352 440 EDGMILANTTSIGM 453 (465)
Q Consensus 440 ~~~DilInaT~~gm 453 (465)
+.+|+|||+++...
T Consensus 83 g~id~li~~ag~~~ 96 (260)
T PRK06198 83 GRLDALVNAAGLTD 96 (260)
T ss_pred CCCCEEEECCCcCC
Confidence 56899999998653
No 274
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=96.72 E-value=0.0055 Score=59.92 Aligned_cols=71 Identities=27% Similarity=0.258 Sum_probs=50.2
Q ss_pred cEEEEEccc-hhHHHHHHHHHHCCCeEEEEE-CCHHHHHHHHHHHCC----cc----cchhccc-------c------cC
Q 012352 382 KLFVVIGAG-GAGKALAYGAKAKGARVVIAN-RTYDRARELAETVGG----HA----LSLADLE-------N------FN 438 (465)
Q Consensus 382 k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~-R~~~~a~~la~~~~~----~~----~~~~~l~-------~------~~ 438 (465)
+.++|+|++ |+|++++..|.+.|++|++.. |+.+++++++++++. .. .++.+.. + ..
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 478999985 999999999999999998875 567777777766631 11 1222211 0 02
Q ss_pred CCCeeEEEecCCCC
Q 012352 439 PEDGMILANTTSIG 452 (465)
Q Consensus 439 ~~~~DilInaT~~g 452 (465)
.+..|+|||+++..
T Consensus 82 ~g~iD~lv~nAG~~ 95 (267)
T TIGR02685 82 FGRCDVLVNNASAF 95 (267)
T ss_pred cCCceEEEECCccC
Confidence 45789999999864
No 275
>PRK06128 oxidoreductase; Provisional
Probab=96.72 E-value=0.0043 Score=61.95 Aligned_cols=75 Identities=25% Similarity=0.300 Sum_probs=51.2
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH--HHHHHHHHHH---CCcc----cchhc---c-------ccc
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY--DRARELAETV---GGHA----LSLAD---L-------ENF 437 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~--~~a~~la~~~---~~~~----~~~~~---l-------~~~ 437 (465)
.+++|++||+|+ ||+|++++..|++.|++|++..|+. ...+++.+.+ +... .++.+ + .+
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~- 130 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVK- 130 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHH-
Confidence 367899999998 5999999999999999998887653 2344444443 2211 12211 1 11
Q ss_pred CCCCeeEEEecCCCCC
Q 012352 438 NPEDGMILANTTSIGM 453 (465)
Q Consensus 438 ~~~~~DilInaT~~gm 453 (465)
..+..|+|||+++...
T Consensus 131 ~~g~iD~lV~nAg~~~ 146 (300)
T PRK06128 131 ELGGLDILVNIAGKQT 146 (300)
T ss_pred HhCCCCEEEECCcccC
Confidence 3457899999998653
No 276
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.71 E-value=0.0036 Score=60.64 Aligned_cols=69 Identities=14% Similarity=0.214 Sum_probs=51.0
Q ss_pred CcEEEEEccchhHHHHHHHHHHCC---C-eEEEEEC-CHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCCC
Q 012352 381 GKLFVVIGAGGAGKALAYGAKAKG---A-RVVIANR-TYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 381 ~k~vlV~GaGg~g~ai~~~L~~~G---~-~v~i~~R-~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
..++.|+|+|.+|++++..|.+.| . ++++++| +++++++++++++.... .+..+ .+.++|+||.++|..
T Consensus 4 ~~kI~iIG~G~mg~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~DiViiavp~~ 77 (245)
T PRK07634 4 KHRILFIGAGRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYNVSTT--TDWKQ-HVTSVDTIVLAMPPS 77 (245)
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHcCcEEe--CChHH-HHhcCCEEEEecCHH
Confidence 468999999999999999998876 3 3788888 57888888887764321 22222 234678999998865
No 277
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=96.69 E-value=0.0078 Score=53.69 Aligned_cols=73 Identities=22% Similarity=0.292 Sum_probs=54.6
Q ss_pred EEEEEcc-chhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCc------ccch-hcccccCCCCeeEEEecCCCC
Q 012352 383 LFVVIGA-GGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH------ALSL-ADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 383 ~vlV~Ga-Gg~g~ai~~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~------~~~~-~~l~~~~~~~~DilInaT~~g 452 (465)
+|.|+|+ |.+|.++++.|...+. ++.++++++++++..+.++... .... ....+ .+.++|+||.+++..
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~-~~~~aDivvitag~~ 80 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYE-ALKDADIVVITAGVP 80 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGG-GGTTESEEEETTSTS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccccc-ccccccEEEEecccc
Confidence 6899999 9999999999999886 7999999999888877666421 0000 11222 457899999999876
Q ss_pred CCCC
Q 012352 453 MQPK 456 (465)
Q Consensus 453 m~~~ 456 (465)
..|.
T Consensus 81 ~~~g 84 (141)
T PF00056_consen 81 RKPG 84 (141)
T ss_dssp SSTT
T ss_pred cccc
Confidence 5443
No 278
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=96.69 E-value=0.004 Score=63.37 Aligned_cols=71 Identities=20% Similarity=0.137 Sum_probs=53.3
Q ss_pred CcEEEEEccchhHHHHHHHHHHC-CC-eEEEEECCHHHHHHHHHHHCC---cccchhcccccCCCCeeEEEecCCCC
Q 012352 381 GKLFVVIGAGGAGKALAYGAKAK-GA-RVVIANRTYDRARELAETVGG---HALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 381 ~k~vlV~GaGg~g~ai~~~L~~~-G~-~v~i~~R~~~~a~~la~~~~~---~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
.+++.|+|+|..|+.-+.++... .. +|+|++|+.++++.+++++.. .....++..+ ...++|+||.|||..
T Consensus 128 ~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~~~~~~e-av~~aDiVitaT~s~ 203 (325)
T TIGR02371 128 SSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRAATDPRE-AVEGCDILVTTTPSR 203 (325)
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEEeCCHHH-HhccCCEEEEecCCC
Confidence 57899999999999987777553 34 899999999999999887642 1112233334 456899999999765
No 279
>PRK09135 pteridine reductase; Provisional
Probab=96.68 E-value=0.007 Score=57.86 Aligned_cols=75 Identities=27% Similarity=0.244 Sum_probs=50.9
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC-HHHHHHHHHHHC----Cc----ccchhc---cccc------CC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETVG----GH----ALSLAD---LENF------NP 439 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~-~~~a~~la~~~~----~~----~~~~~~---l~~~------~~ 439 (465)
..+++++|+|+ |++|+.++..|.+.|++|+++.|+ .++.+.+.+.+. .. ..++.+ +... ..
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35689999998 599999999999999999999885 555555554432 11 112221 1110 23
Q ss_pred CCeeEEEecCCCCC
Q 012352 440 EDGMILANTTSIGM 453 (465)
Q Consensus 440 ~~~DilInaT~~gm 453 (465)
+..|+||++++...
T Consensus 84 ~~~d~vi~~ag~~~ 97 (249)
T PRK09135 84 GRLDALVNNASSFY 97 (249)
T ss_pred CCCCEEEECCCCCC
Confidence 56899999988653
No 280
>PRK06199 ornithine cyclodeaminase; Validated
Probab=96.68 E-value=0.003 Score=65.60 Aligned_cols=71 Identities=20% Similarity=0.187 Sum_probs=55.2
Q ss_pred CcEEEEEccchhHHHHHHHHHH-C-CC-eEEEEECCHHHHHHHHHHHCCc------ccchhcccccCCCCeeEEEecCCC
Q 012352 381 GKLFVVIGAGGAGKALAYGAKA-K-GA-RVVIANRTYDRARELAETVGGH------ALSLADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 381 ~k~vlV~GaGg~g~ai~~~L~~-~-G~-~v~i~~R~~~~a~~la~~~~~~------~~~~~~l~~~~~~~~DilInaT~~ 451 (465)
.+++.|+|+|..|+.-+.++.. + .. +|+||+|++++++++++++... ....++..+ .+.++|+||.||+.
T Consensus 155 a~~l~iiG~G~QA~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~e-av~~ADIVvtaT~s 233 (379)
T PRK06199 155 SKVVGLLGPGVMGKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEE-VVRGSDIVTYCNSG 233 (379)
T ss_pred CCEEEEECCcHHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHH-HHcCCCEEEEccCC
Confidence 4789999999999999999876 4 36 8999999999999999887532 111233444 46789999999975
Q ss_pred C
Q 012352 452 G 452 (465)
Q Consensus 452 g 452 (465)
.
T Consensus 234 ~ 234 (379)
T PRK06199 234 E 234 (379)
T ss_pred C
Confidence 4
No 281
>PRK07589 ornithine cyclodeaminase; Validated
Probab=96.66 E-value=0.0035 Score=64.30 Aligned_cols=70 Identities=19% Similarity=0.260 Sum_probs=53.8
Q ss_pred CcEEEEEccchhHHHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHCCc---ccchhcccccCCCCeeEEEecCCC
Q 012352 381 GKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELAETVGGH---ALSLADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 381 ~k~vlV~GaGg~g~ai~~~L~~-~G~-~v~i~~R~~~~a~~la~~~~~~---~~~~~~l~~~~~~~~DilInaT~~ 451 (465)
.+++.|+|+|.-|+.-+.++.. +.. +|+||+|++++++++++++... ....+++.+ ...++|+|+.||+.
T Consensus 129 a~~l~iiGaG~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~-av~~ADIIvtaT~S 203 (346)
T PRK07589 129 SRTMALIGNGAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIVACRSVAE-AVEGADIITTVTAD 203 (346)
T ss_pred CcEEEEECCcHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcCCcEEEeCCHHH-HHhcCCEEEEecCC
Confidence 4789999999999988877654 456 8999999999999999888532 111233444 46789999999974
No 282
>PRK12937 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.0072 Score=57.78 Aligned_cols=74 Identities=28% Similarity=0.361 Sum_probs=50.0
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHHC---Cc--c--cchhc---cccc------CCC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVG---GH--A--LSLAD---LENF------NPE 440 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R-~~~~a~~la~~~~---~~--~--~~~~~---l~~~------~~~ 440 (465)
+++|+++|+|+ |++|++++..|.++|++++++.| +..+.+++.+++. .. . .++.+ +.+. ..+
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 56789999998 69999999999999998877765 4445555555442 11 1 12211 1110 245
Q ss_pred CeeEEEecCCCC
Q 012352 441 DGMILANTTSIG 452 (465)
Q Consensus 441 ~~DilInaT~~g 452 (465)
+.|+|||+++..
T Consensus 83 ~id~vi~~ag~~ 94 (245)
T PRK12937 83 RIDVLVNNAGVM 94 (245)
T ss_pred CCCEEEECCCCC
Confidence 789999999864
No 283
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=96.66 E-value=0.005 Score=59.30 Aligned_cols=74 Identities=38% Similarity=0.531 Sum_probs=51.5
Q ss_pred cCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHH--HHHHHHHHC----Ccc----cchhc----c-------cc
Q 012352 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDR--ARELAETVG----GHA----LSLAD----L-------EN 436 (465)
Q Consensus 379 l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~--a~~la~~~~----~~~----~~~~~----l-------~~ 436 (465)
+.+|.++|+|++ |+|++++..|++.|++++++.|+.+. .+.+.+... ... .|+.+ + .+
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~ 82 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE 82 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence 467899999997 99999999999999998888777553 344443333 111 23222 1 11
Q ss_pred cCCCCeeEEEecCCCCC
Q 012352 437 FNPEDGMILANTTSIGM 453 (465)
Q Consensus 437 ~~~~~~DilInaT~~gm 453 (465)
..+..|++||+++.+.
T Consensus 83 -~~g~id~lvnnAg~~~ 98 (251)
T COG1028 83 -EFGRIDILVNNAGIAG 98 (251)
T ss_pred -HcCCCCEEEECCCCCC
Confidence 3567999999999875
No 284
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=96.66 E-value=0.015 Score=57.33 Aligned_cols=141 Identities=18% Similarity=0.260 Sum_probs=90.2
Q ss_pred eecCCCccccccHHHHHHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCch-----HHHhhhccccC
Q 012352 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHK-----EAAVKCCDEVD 326 (465)
Q Consensus 257 ~~iG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K-----~~v~~~~d~~~ 326 (465)
-++|+--+....=..-.+..+++|+...+..+.. +++.+.+..+ .++.+.|.-|..|.= +.++..++
T Consensus 36 ilvgddpaS~~YV~~K~k~~~~iGi~~~~~~l~~~~t~~eLl~~I~~lN~D~~v~GIlVQlPLp~hld~~~il~~I~--- 112 (283)
T COG0190 36 ILVGDDPASQVYVRSKKKAAEEIGIASELYDLPEDITEEELLALIDELNADPEVDGILVQLPLPKHLDEQKLLQAID--- 112 (283)
T ss_pred EEeCCCHHHHHHHHHHHHHHHHcCCeeEEEeCCCcCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhhcC---
Confidence 3455543332333455788999999987666642 3677777777 688999999999943 22222221
Q ss_pred HHHHhccceeeEEEeccCCeEE-E----EeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHH
Q 012352 327 TVAKSIGAVNCIIRRQSDGKLF-G----YNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGA 400 (465)
Q Consensus 327 ~~A~~~gavNtv~~~~~~g~l~-G----~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L 400 (465)
+ -+.+..-+.. .-|++. + .-.--.|++..|++. +.++.||+|+|+|.| =.||-++..|
T Consensus 113 p-~KDVDG~hp~----N~g~L~~~~~~~~PCTp~gi~~ll~~~-----------~i~l~Gk~~vVVGrS~iVGkPla~lL 176 (283)
T COG0190 113 P-EKDVDGFHPY----NLGKLAQGEPGFLPCTPAGIMTLLEEY-----------GIDLRGKNVVVVGRSNIVGKPLALLL 176 (283)
T ss_pred c-CCCccccChh----HhcchhcCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcCcHHHHHHH
Confidence 1 0111111111 012332 2 012257888888774 267899999999999 5899999999
Q ss_pred HHCCCeEEEEECCHHH
Q 012352 401 KAKGARVVIANRTYDR 416 (465)
Q Consensus 401 ~~~G~~v~i~~R~~~~ 416 (465)
...++.|+++.+....
T Consensus 177 ~~~naTVtvcHs~T~~ 192 (283)
T COG0190 177 LNANATVTVCHSRTKD 192 (283)
T ss_pred HhCCCEEEEEcCCCCC
Confidence 9999999999765433
No 285
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.66 E-value=0.015 Score=57.89 Aligned_cols=128 Identities=20% Similarity=0.265 Sum_probs=83.2
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHHhhhccccCHHHHhccceeeEEEeccCCeE
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKL 347 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v~~~~d~~~~~A~~~gavNtv~~~~~~g~l 347 (465)
.+.++++|++.....++. +++.+.++.+ .++.+.|+.|..|.-.. +|+ -+...+++.-. +. || +
T Consensus 53 ~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvqlPLP~~----id~----~~i~~~I~p~K-DV-DG-l 121 (286)
T PRK14184 53 ERACEDAGIVSEAFRLPADTTQEELEDLIAELNARPDIDGILLQLPLPKG----LDS----QRCLELIDPAK-DV-DG-F 121 (286)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCcCceEEEecCCCCC----CCH----HHHHhccCccc-Cc-cc-C
Confidence 567999999987666653 3577777777 57789999999996432 211 11222222221 10 11 1
Q ss_pred EEEe-------------ccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHH----CCCeEEE
Q 012352 348 FGYN-------------TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKA----KGARVVI 409 (465)
Q Consensus 348 ~G~N-------------TD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~----~G~~v~i 409 (465)
+-+| .--.|++.-|+.. +.++.||+|+|+|-+ =.|+-++..|.+ .++.|++
T Consensus 122 ~~~N~g~l~~~~~~~~PcTp~av~~lL~~~-----------~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~ 190 (286)
T PRK14184 122 HPENMGRLALGLPGFRPCTPAGVMTLLERY-----------GLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTV 190 (286)
T ss_pred CHhhHHHHhCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEE
Confidence 1111 1245666666653 267899999999998 599999999998 7899999
Q ss_pred EECCHHHHHHHHH
Q 012352 410 ANRTYDRARELAE 422 (465)
Q Consensus 410 ~~R~~~~a~~la~ 422 (465)
+..+....++...
T Consensus 191 ~hs~t~~l~~~~~ 203 (286)
T PRK14184 191 CHSRTPDLAEECR 203 (286)
T ss_pred EeCCchhHHHHHH
Confidence 9876555444433
No 286
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.65 E-value=0.0049 Score=59.91 Aligned_cols=35 Identities=29% Similarity=0.412 Sum_probs=30.8
Q ss_pred ccCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEEC
Q 012352 378 ALAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANR 412 (465)
Q Consensus 378 ~l~~k~vlV~GaG---g~g~ai~~~L~~~G~~v~i~~R 412 (465)
.+++|+++|+|++ |+|++++..|++.|++|++.+|
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~ 40 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYW 40 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEec
Confidence 3678999999994 8999999999999999888754
No 287
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.0047 Score=59.16 Aligned_cols=47 Identities=28% Similarity=0.473 Sum_probs=42.0
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV 424 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~ 424 (465)
++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l 50 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAI 50 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHH
Confidence 367899999998 59999999999999999999999999888877765
No 288
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.64 E-value=0.0037 Score=57.83 Aligned_cols=32 Identities=22% Similarity=0.313 Sum_probs=29.9
Q ss_pred EEEEEccchhHHHHHHHHHHCCC-eEEEEECCH
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY 414 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~~ 414 (465)
+|+|+|+||+|..++..|+..|+ ++++++.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 48999999999999999999999 899999875
No 289
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.64 E-value=0.0036 Score=62.44 Aligned_cols=41 Identities=22% Similarity=0.411 Sum_probs=37.6
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE 422 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~ 422 (465)
++|.|+|+|-+|++++..|++.|++|++++|++++.+.+.+
T Consensus 2 ~~V~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~ 42 (288)
T PRK09260 2 EKLVVVGAGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQ 42 (288)
T ss_pred cEEEEECccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHH
Confidence 57999999999999999999999999999999998887654
No 290
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=96.64 E-value=0.011 Score=60.06 Aligned_cols=132 Identities=17% Similarity=0.223 Sum_probs=81.0
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHHh--hhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAV--KCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v~--~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+.++++|++..-..++- +++.+.++.+ .++.+.|+.|..|.-..+- ..++.+++ -+.+...+.+- -|
T Consensus 108 ~K~a~~~GI~~~~~~l~~~~te~ell~~I~~lN~D~~V~GIlVQlPLP~hid~~~i~~~I~p-~KDVDGl~p~N----~G 182 (345)
T PLN02897 108 IKACEETGIKSLLAELPEDCTEGQILSALRKFNEDTSIHGILVQLPLPQHLDESKILNMVRL-EKDVDGFHPLN----VG 182 (345)
T ss_pred HHHHHhcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCc-ccCccCCCHHH----HH
Confidence 567899999976555543 2577777777 5778999999999742211 11111111 01111111110 01
Q ss_pred eE-EEE------eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHH
Q 012352 346 KL-FGY------NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRA 417 (465)
Q Consensus 346 ~l-~G~------NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a 417 (465)
++ .|. -.--.|++.-|++. +.+++||+|+|+|-+ =.|+-++..|.+.|+.|+++.......
T Consensus 183 ~L~~~~~~~~~~PCTp~avi~LL~~~-----------~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl 251 (345)
T PLN02897 183 NLAMRGREPLFVSCTPKGCVELLIRS-----------GVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDP 251 (345)
T ss_pred HHhcCCCCCCCcCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCH
Confidence 22 111 11245666666653 367899999999998 589999999999999999996543333
Q ss_pred HHH
Q 012352 418 REL 420 (465)
Q Consensus 418 ~~l 420 (465)
++.
T Consensus 252 ~~~ 254 (345)
T PLN02897 252 EQI 254 (345)
T ss_pred HHH
Confidence 333
No 291
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.63 E-value=0.0081 Score=57.74 Aligned_cols=71 Identities=30% Similarity=0.328 Sum_probs=52.6
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc----------ccccCCCCe
Q 012352 381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD----------LENFNPEDG 442 (465)
Q Consensus 381 ~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~----------l~~~~~~~~ 442 (465)
+|++||+|+ |++|++++..|.++|++|+++.|+.++.+.+.+++. ... .++.+ +.+ .....
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~~ 79 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAA-EFGGL 79 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH-hcCCC
Confidence 368999997 699999999999999999999999988888776652 111 12221 111 24568
Q ss_pred eEEEecCCCC
Q 012352 443 MILANTTSIG 452 (465)
Q Consensus 443 DilInaT~~g 452 (465)
|+||++++..
T Consensus 80 d~vi~~a~~~ 89 (255)
T TIGR01963 80 DILVNNAGIQ 89 (255)
T ss_pred CEEEECCCCC
Confidence 9999998754
No 292
>PRK12744 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.008 Score=58.28 Aligned_cols=76 Identities=26% Similarity=0.330 Sum_probs=49.8
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC----CHHHHHHHHHHH---CCcc----cchh---ccccc-----
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR----TYDRARELAETV---GGHA----LSLA---DLENF----- 437 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R----~~~~a~~la~~~---~~~~----~~~~---~l~~~----- 437 (465)
.+++|+++|+|+ ||+|++++..|++.|++|+++.| +.+..+++.+++ +... .|+. ++.+.
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 84 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAK 84 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHH
Confidence 466899999998 59999999999999998655543 344555555444 2111 2222 11110
Q ss_pred -CCCCeeEEEecCCCCC
Q 012352 438 -NPEDGMILANTTSIGM 453 (465)
Q Consensus 438 -~~~~~DilInaT~~gm 453 (465)
..+..|+|||+++...
T Consensus 85 ~~~~~id~li~~ag~~~ 101 (257)
T PRK12744 85 AAFGRPDIAINTVGKVL 101 (257)
T ss_pred HhhCCCCEEEECCcccC
Confidence 2457899999998743
No 293
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.62 E-value=0.0053 Score=59.21 Aligned_cols=71 Identities=27% Similarity=0.413 Sum_probs=55.9
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHH-HHHHHCCccc-----chhcccccCCCCeeEEEecCCCC
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARE-LAETVGGHAL-----SLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~-la~~~~~~~~-----~~~~l~~~~~~~~DilInaT~~g 452 (465)
++++|+|+|-.|+.+|..|.+.|.+|+++.+++++.++ +++++...++ +.+.+.+..+.++|.+|-+|+-.
T Consensus 1 m~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d 77 (225)
T COG0569 1 MKIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGND 77 (225)
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCC
Confidence 46899999999999999999999999999999999888 4445554332 22334444567899999998864
No 294
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.60 E-value=0.0073 Score=63.96 Aligned_cols=74 Identities=31% Similarity=0.378 Sum_probs=53.7
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC--HHHHHHHHHHHCCccc--chhc---c-------cccCCCCe
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT--YDRARELAETVGGHAL--SLAD---L-------ENFNPEDG 442 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~--~~~a~~la~~~~~~~~--~~~~---l-------~~~~~~~~ 442 (465)
.+++++++|+|+ ||+|++++..|++.|++|++++|. .++.+++.++++...+ |+.+ + .+ ..+..
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-~~g~i 285 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAE-RHGGL 285 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHH-hCCCC
Confidence 356899999998 799999999999999999999884 4556666666653322 2211 1 11 23468
Q ss_pred eEEEecCCCC
Q 012352 443 MILANTTSIG 452 (465)
Q Consensus 443 DilInaT~~g 452 (465)
|+|||+++..
T Consensus 286 d~vi~~AG~~ 295 (450)
T PRK08261 286 DIVVHNAGIT 295 (450)
T ss_pred CEEEECCCcC
Confidence 9999999865
No 295
>PRK07985 oxidoreductase; Provisional
Probab=96.59 E-value=0.0049 Score=61.49 Aligned_cols=74 Identities=24% Similarity=0.286 Sum_probs=51.0
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC--HHHHHHHHHHH---CCcc----cchhc---c-------ccc
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT--YDRARELAETV---GGHA----LSLAD---L-------ENF 437 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~--~~~a~~la~~~---~~~~----~~~~~---l-------~~~ 437 (465)
.+++|+++|+|+ ||+|++++..|++.|++|++..|+ .++.+++.+.+ +... .++.+ + .+
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~- 124 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHK- 124 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH-
Confidence 367899999998 599999999999999999988764 34455554433 2211 12211 1 11
Q ss_pred CCCCeeEEEecCCCC
Q 012352 438 NPEDGMILANTTSIG 452 (465)
Q Consensus 438 ~~~~~DilInaT~~g 452 (465)
..+..|++||+++.+
T Consensus 125 ~~g~id~lv~~Ag~~ 139 (294)
T PRK07985 125 ALGGLDIMALVAGKQ 139 (294)
T ss_pred HhCCCCEEEECCCCC
Confidence 346789999998764
No 296
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=96.59 E-value=0.0072 Score=57.64 Aligned_cols=76 Identities=18% Similarity=0.245 Sum_probs=51.4
Q ss_pred CcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHHCCcccchhcccccCCCCeeEEEecCC
Q 012352 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY-DRARELAETVGGHALSLADLENFNPEDGMILANTTS 450 (465)
Q Consensus 374 ~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~-~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~ 450 (465)
|...++++|+|||+|+|..|..=+..|.+.|++|+|++.+. +....+.++-...++. +......+..++++|-||+
T Consensus 5 Pl~~~l~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~-~~~~~~~~~~~~lviaAt~ 81 (210)
T COG1648 5 PLFLDLEGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIE-REFDAEDLDDAFLVIAATD 81 (210)
T ss_pred ceEEEcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhh-cccChhhhcCceEEEEeCC
Confidence 45678999999999999999999999999999999999877 4455555443321211 1111102233667776665
No 297
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=96.58 E-value=0.0039 Score=62.73 Aligned_cols=72 Identities=19% Similarity=0.163 Sum_probs=49.4
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC--C---c--c--cchhc---ccccCCCCeeEEE
Q 012352 380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG--G---H--A--LSLAD---LENFNPEDGMILA 446 (465)
Q Consensus 380 ~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~--~---~--~--~~~~~---l~~~~~~~~DilI 446 (465)
.+|++||+|+ |++|++++..|.+.|++|+++.|+.++......... . . . .++.+ +.+ .+.+.|+||
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~d~vi 82 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFEL-AIDGCETVF 82 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHH-HHcCCCEEE
Confidence 3689999997 789999999999999999999888765544332221 0 1 1 12222 222 244689999
Q ss_pred ecCCCC
Q 012352 447 NTTSIG 452 (465)
Q Consensus 447 naT~~g 452 (465)
|+++..
T Consensus 83 h~A~~~ 88 (325)
T PLN02989 83 HTASPV 88 (325)
T ss_pred EeCCCC
Confidence 999754
No 298
>PRK12743 oxidoreductase; Provisional
Probab=96.58 E-value=0.0078 Score=58.38 Aligned_cols=72 Identities=29% Similarity=0.294 Sum_probs=50.7
Q ss_pred CcEEEEEccc-hhHHHHHHHHHHCCCeEEEEE-CCHHHHHHHHHHH---CCcc----cchhc----------ccccCCCC
Q 012352 381 GKLFVVIGAG-GAGKALAYGAKAKGARVVIAN-RTYDRARELAETV---GGHA----LSLAD----------LENFNPED 441 (465)
Q Consensus 381 ~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~-R~~~~a~~la~~~---~~~~----~~~~~----------l~~~~~~~ 441 (465)
+|+++|+|++ |+|++++..|++.|++|+++. |+.++++.+.+++ +... .++.+ +.+ ..+.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~~ 80 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQ-RLGR 80 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH-HcCC
Confidence 5789999984 999999999999999988875 5667776666554 2211 22221 111 2457
Q ss_pred eeEEEecCCCCC
Q 012352 442 GMILANTTSIGM 453 (465)
Q Consensus 442 ~DilInaT~~gm 453 (465)
.|+||++++...
T Consensus 81 id~li~~ag~~~ 92 (256)
T PRK12743 81 IDVLVNNAGAMT 92 (256)
T ss_pred CCEEEECCCCCC
Confidence 899999988754
No 299
>PRK09134 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.0095 Score=57.77 Aligned_cols=75 Identities=29% Similarity=0.356 Sum_probs=51.2
Q ss_pred ccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHH---CCcc----cchhc---cccc------CC
Q 012352 378 ALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANR-TYDRARELAETV---GGHA----LSLAD---LENF------NP 439 (465)
Q Consensus 378 ~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R-~~~~a~~la~~~---~~~~----~~~~~---l~~~------~~ 439 (465)
...+|+++|+|++ |+|++++..|.+.|++|+++.| +.++.+++.+++ +... .|+.+ +.+. ..
T Consensus 6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL 85 (258)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4567899999995 9999999999999998877654 566666666554 2211 12211 1110 23
Q ss_pred CCeeEEEecCCCC
Q 012352 440 EDGMILANTTSIG 452 (465)
Q Consensus 440 ~~~DilInaT~~g 452 (465)
+..|+|||+++..
T Consensus 86 ~~iD~vi~~ag~~ 98 (258)
T PRK09134 86 GPITLLVNNASLF 98 (258)
T ss_pred CCCCEEEECCcCC
Confidence 5689999999764
No 300
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.58 E-value=0.0037 Score=64.77 Aligned_cols=35 Identities=26% Similarity=0.428 Sum_probs=32.5
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECC
Q 012352 379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT 413 (465)
Q Consensus 379 l~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~ 413 (465)
+.+++|+|+|+||+|..++..|+..|+ ++++++.+
T Consensus 39 l~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 39 LHNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred hcCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 567899999999999999999999998 99999876
No 301
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.57 E-value=0.0063 Score=58.97 Aligned_cols=35 Identities=31% Similarity=0.445 Sum_probs=31.9
Q ss_pred cCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEECC
Q 012352 379 LAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRT 413 (465)
Q Consensus 379 l~~k~vlV~GaG---g~g~ai~~~L~~~G~~v~i~~R~ 413 (465)
+++|+++|+|++ |+|++++..|++.|++|+++.|+
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 567899999994 79999999999999999999887
No 302
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.0065 Score=60.49 Aligned_cols=77 Identities=22% Similarity=0.233 Sum_probs=52.5
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHH-HHHHHHHHHC---Ccc----cchh---ccccc------C
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-RARELAETVG---GHA----LSLA---DLENF------N 438 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~-~a~~la~~~~---~~~----~~~~---~l~~~------~ 438 (465)
..+++|+++|+|+ ||+|++++..|++.|++|++++|+.. ..+.+.+.+. ... .|+. ++.+. .
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~ 121 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE 121 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4577899999998 59999999999999999999998753 3444444432 111 1221 11110 2
Q ss_pred CCCeeEEEecCCCCC
Q 012352 439 PEDGMILANTTSIGM 453 (465)
Q Consensus 439 ~~~~DilInaT~~gm 453 (465)
.+..|+|||+++...
T Consensus 122 ~~~iD~lI~~Ag~~~ 136 (290)
T PRK06701 122 LGRLDILVNNAAFQY 136 (290)
T ss_pred cCCCCEEEECCcccC
Confidence 356899999998653
No 303
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.56 E-value=0.0048 Score=62.72 Aligned_cols=42 Identities=38% Similarity=0.372 Sum_probs=38.3
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET 423 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~ 423 (465)
.++.|+|+|.+|.+++..|++.|.+|++++|++++.+.+.+.
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~ 46 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAAE 46 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHh
Confidence 379999999999999999999999999999999988887753
No 304
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.55 E-value=0.0063 Score=57.61 Aligned_cols=36 Identities=19% Similarity=0.404 Sum_probs=33.4
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECC
Q 012352 378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT 413 (465)
Q Consensus 378 ~l~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~ 413 (465)
.+..++|+|+|+||+|..++..|+..|+ ++++++++
T Consensus 18 ~L~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 18 KLEQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HHhCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3677899999999999999999999999 89999987
No 305
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=96.54 E-value=0.0017 Score=63.25 Aligned_cols=73 Identities=23% Similarity=0.210 Sum_probs=50.1
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchh---cc-------cccCCCCeeEE
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA---DL-------ENFNPEDGMIL 445 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~---~l-------~~~~~~~~Dil 445 (465)
..+++|+++|+|+ ||+|++++..|++.|++|++.+|+.++...- .......++. ++ .+ ..+..|+|
T Consensus 5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~-~~g~id~l 81 (266)
T PRK06171 5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHE--NYQFVPTDVSSAEEVNHTVAEIIE-KFGRIDGL 81 (266)
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccccC--ceEEEEccCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence 3567899999997 5999999999999999999999987654211 0000011221 11 11 34678999
Q ss_pred EecCCCC
Q 012352 446 ANTTSIG 452 (465)
Q Consensus 446 InaT~~g 452 (465)
||+++..
T Consensus 82 i~~Ag~~ 88 (266)
T PRK06171 82 VNNAGIN 88 (266)
T ss_pred EECCccc
Confidence 9999864
No 306
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=96.53 E-value=0.0064 Score=65.26 Aligned_cols=47 Identities=28% Similarity=0.278 Sum_probs=39.9
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH 427 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~ 427 (465)
.+.+|+|+|+|.+|.+++..+..+|++|++++++.++.+ .++.++..
T Consensus 163 p~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle-~a~~lGa~ 209 (511)
T TIGR00561 163 PPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKE-QVQSMGAE 209 (511)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCe
Confidence 457999999999999999999999999999999998754 45556654
No 307
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed
Probab=96.53 E-value=0.05 Score=51.77 Aligned_cols=119 Identities=19% Similarity=0.229 Sum_probs=75.9
Q ss_pred EEEeeccCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCCchhHHHHHHhhCCCcEEEEeccCCCCCCCCCCHHHHHHHHH
Q 012352 26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLR 105 (465)
Q Consensus 26 icv~l~~~t~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~~l~ 105 (465)
+...+...+.+++...++.+...|+.++|+|++-- +..+.++.+.+..+.++++=. | .....++ .+
T Consensus 12 ~~~v~r~~~~~~~~~~~~a~~~gGi~~iEvt~~~~---~~~~~i~~l~~~~~~~~~iGa-----G---TV~~~~~---~~ 77 (206)
T PRK09140 12 LIAILRGITPDEALAHVGALIEAGFRAIEIPLNSP---DPFDSIAALVKALGDRALIGA-----G---TVLSPEQ---VD 77 (206)
T ss_pred EEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCCc---cHHHHHHHHHHHcCCCcEEeE-----E---ecCCHHH---HH
Confidence 44458899999999999999999999999997533 234567777666655544321 1 1122233 34
Q ss_pred HHHHhCCcEEEEeeccccchhHHHHhcCCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEE
Q 012352 106 LAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKF 172 (465)
Q Consensus 106 ~~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~~iI~S~H~f~~tps~~el~~~~~~~~~~gadivKi 172 (465)
.+.+.|++++=.= ..+.++.+. .+..+..++.+.| || +| +.++.++|+|++|+
T Consensus 78 ~a~~aGA~fivsp-~~~~~v~~~---~~~~~~~~~~G~~----t~--~E----~~~A~~~Gad~vk~ 130 (206)
T PRK09140 78 RLADAGGRLIVTP-NTDPEVIRR---AVALGMVVMPGVA----TP--TE----AFAALRAGAQALKL 130 (206)
T ss_pred HHHHcCCCEEECC-CCCHHHHHH---HHHCCCcEEcccC----CH--HH----HHHHHHcCCCEEEE
Confidence 6777888885331 122222222 2346778888877 33 23 45566799999997
No 308
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.52 E-value=0.0048 Score=65.29 Aligned_cols=73 Identities=18% Similarity=0.130 Sum_probs=48.6
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH---CCcccchhcccccCCC-CeeEEEecCCCC
Q 012352 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSLADLENFNPE-DGMILANTTSIG 452 (465)
Q Consensus 379 l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~---~~~~~~~~~l~~~~~~-~~DilInaT~~g 452 (465)
+++|+++|+|.|++|++++..|++.|++|++++++........+++ +.....-....+ ... .+|+||++.++.
T Consensus 3 ~~~k~v~v~G~g~~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~~-~~~~~~d~vV~s~gi~ 79 (447)
T PRK02472 3 YQNKKVLVLGLAKSGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHPLE-LLDEDFDLMVKNPGIP 79 (447)
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCCHH-HhcCcCCEEEECCCCC
Confidence 4679999999999999999999999999999998754333333333 222110000111 112 389999988765
No 309
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.51 E-value=0.0066 Score=60.53 Aligned_cols=41 Identities=27% Similarity=0.331 Sum_probs=36.3
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE 422 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~ 422 (465)
++|.|+|+|-+|.+++..|+..|.+|+++++++++.+...+
T Consensus 4 ~kIaViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~ 44 (287)
T PRK08293 4 KNVTVAGAGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKE 44 (287)
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence 57999999999999999999999999999999887665543
No 310
>PRK07069 short chain dehydrogenase; Validated
Probab=96.51 E-value=0.0068 Score=58.19 Aligned_cols=69 Identities=23% Similarity=0.379 Sum_probs=49.7
Q ss_pred EEEEcc-chhHHHHHHHHHHCCCeEEEEECC-HHHHHHHHHHHCC----c-c----cchhc---c-------cccCCCCe
Q 012352 384 FVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETVGG----H-A----LSLAD---L-------ENFNPEDG 442 (465)
Q Consensus 384 vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~-~~~a~~la~~~~~----~-~----~~~~~---l-------~~~~~~~~ 442 (465)
++|+|+ ||+|++++..|.+.|++|+++.|+ .++.+++.+++.. . . .++.+ + .+ ..+..
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~i 80 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAAD-AMGGL 80 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHH-HcCCc
Confidence 789987 699999999999999999999998 7777777665531 1 0 12211 1 11 24568
Q ss_pred eEEEecCCCCC
Q 012352 443 MILANTTSIGM 453 (465)
Q Consensus 443 DilInaT~~gm 453 (465)
|+|||+++...
T Consensus 81 d~vi~~ag~~~ 91 (251)
T PRK07069 81 SVLVNNAGVGS 91 (251)
T ss_pred cEEEECCCcCC
Confidence 99999987653
No 311
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=96.51 E-value=0.0051 Score=62.76 Aligned_cols=41 Identities=20% Similarity=0.218 Sum_probs=37.1
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHH
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRA 417 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a 417 (465)
..+.++++.|+|.|.+|++++..|...|++|+.++|+++..
T Consensus 142 ~~l~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~ 182 (330)
T PRK12480 142 KPVKNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKD 182 (330)
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHh
Confidence 45789999999999999999999999999999999987653
No 312
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=96.51 E-value=0.0077 Score=61.24 Aligned_cols=69 Identities=33% Similarity=0.461 Sum_probs=52.9
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchh---cccccCCCCeeEEEecCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLA---DLENFNPEDGMILANTTS 450 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~---~l~~~~~~~~DilInaT~ 450 (465)
.+++|+|+|+||.|..++..++..|++|+.++|+++| .+++.+++... +... .... ..+.+|++|++++
T Consensus 166 pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K-~e~a~~lGAd~~i~~~~~~~~~~-~~~~~d~ii~tv~ 238 (339)
T COG1064 166 PGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEK-LELAKKLGADHVINSSDSDALEA-VKEIADAIIDTVG 238 (339)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHH-HHHHHHhCCcEEEEcCCchhhHH-hHhhCcEEEECCC
Confidence 3789999999999999999999999999999999988 45677787543 3322 1111 1123899999988
No 313
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=96.50 E-value=0.0049 Score=64.46 Aligned_cols=87 Identities=21% Similarity=0.265 Sum_probs=56.9
Q ss_pred HHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEcc-----------------chhHHHHHHHHHHCCCeEEEEECCHHH
Q 012352 354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGA-----------------GGAGKALAYGAKAKGARVVIANRTYDR 416 (465)
Q Consensus 354 ~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~Ga-----------------Gg~g~ai~~~L~~~G~~v~i~~R~~~~ 416 (465)
..-++..+++.+.. .++++|+++|+|+ |.+|++++.+|..+|++|+++.++..
T Consensus 170 ~~~I~~~~~~~~~~---------~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~- 239 (399)
T PRK05579 170 PEEIVAAAERALSP---------KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN- 239 (399)
T ss_pred HHHHHHHHHHHhhh---------cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-
Confidence 44455555554421 3578999999987 45999999999999999999988752
Q ss_pred HHHHHHHHCCcccchh---c----ccccCCCCeeEEEecCCCCCC
Q 012352 417 ARELAETVGGHALSLA---D----LENFNPEDGMILANTTSIGMQ 454 (465)
Q Consensus 417 a~~la~~~~~~~~~~~---~----l~~~~~~~~DilInaT~~gm~ 454 (465)
.+. ..+...+++. + +.+ ..+.+|++||+++++-+
T Consensus 240 ~~~---~~~~~~~dv~~~~~~~~~v~~-~~~~~DilI~~Aav~d~ 280 (399)
T PRK05579 240 LPT---PAGVKRIDVESAQEMLDAVLA-ALPQADIFIMAAAVADY 280 (399)
T ss_pred ccC---CCCcEEEccCCHHHHHHHHHH-hcCCCCEEEEccccccc
Confidence 110 0011112222 1 122 35679999999988754
No 314
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=96.50 E-value=0.0044 Score=61.67 Aligned_cols=44 Identities=32% Similarity=0.425 Sum_probs=40.0
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG 426 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~ 426 (465)
+|-+||.|.||..++..|.+.|+.++++||+++++.+++...+.
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga 45 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGA 45 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCC
Confidence 68899999999999999999999999999999998777766654
No 315
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=96.50 E-value=0.0049 Score=71.21 Aligned_cols=73 Identities=16% Similarity=0.184 Sum_probs=56.5
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCC-Ce-------------EEEEECCHHHHHHHHHHH-CCcc--cch---hcccccCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKG-AR-------------VVIANRTYDRARELAETV-GGHA--LSL---ADLENFNP 439 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G-~~-------------v~i~~R~~~~a~~la~~~-~~~~--~~~---~~l~~~~~ 439 (465)
..|+|+|+|+|.+|+.++..|++.. ++ |+|++++.++++++++.+ +... +++ +++.+ .+
T Consensus 568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~-~v 646 (1042)
T PLN02819 568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLK-YV 646 (1042)
T ss_pred cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHH-hh
Confidence 4679999999999999999998754 24 999999999999999887 3222 222 33433 34
Q ss_pred CCeeEEEecCCCCC
Q 012352 440 EDGMILANTTSIGM 453 (465)
Q Consensus 440 ~~~DilInaT~~gm 453 (465)
.++|+||+++|..+
T Consensus 647 ~~~DaVIsalP~~~ 660 (1042)
T PLN02819 647 SQVDVVISLLPASC 660 (1042)
T ss_pred cCCCEEEECCCchh
Confidence 67999999999764
No 316
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.49 E-value=0.025 Score=56.60 Aligned_cols=135 Identities=19% Similarity=0.240 Sum_probs=84.0
Q ss_pred HHHHHHcCCCeeEecccc----ccHHHHHHHh-hcCCCCeeEeccCchHHHhh--hccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVK--CCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~~----~~l~~~~~~l-~~~~~~G~~vT~P~K~~v~~--~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+.++++|++.....++. +++.+.++.+ .++.+.|+.|..|.-..+-. .++.+++ -+.+...+..- -|
T Consensus 53 ~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~Plp~~id~~~i~~~I~p-~KDVDGl~~~n----~g 127 (295)
T PRK14174 53 AKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDP-AKDVDGFHPEN----LG 127 (295)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCc-cccccccChhh----HH
Confidence 667999999987776664 2577777777 57789999999997521110 1111111 11111111110 12
Q ss_pred eEE-EE--e----ccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHH----CCCeEEEEECC
Q 012352 346 KLF-GY--N----TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKA----KGARVVIANRT 413 (465)
Q Consensus 346 ~l~-G~--N----TD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~----~G~~v~i~~R~ 413 (465)
+++ |+ + .--.|++.-|+.. +.++.||+|+|+|-+ =.|+-++..|.+ .|+.|+++..+
T Consensus 128 ~l~~~~~~~~~~PcTp~ail~ll~~y-----------~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~ 196 (295)
T PRK14174 128 RLVMGHLDKCFVSCTPYGILELLGRY-----------NIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSA 196 (295)
T ss_pred HHhcCCCCCCcCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCC
Confidence 221 21 1 2245666656542 257899999999998 589999888887 67899999887
Q ss_pred HHHHHHHHHH
Q 012352 414 YDRARELAET 423 (465)
Q Consensus 414 ~~~a~~la~~ 423 (465)
....++...+
T Consensus 197 t~~l~~~~~~ 206 (295)
T PRK14174 197 TKDIPSYTRQ 206 (295)
T ss_pred chhHHHHHHh
Confidence 7665555443
No 317
>PLN00015 protochlorophyllide reductase
Probab=96.48 E-value=0.0066 Score=60.98 Aligned_cols=68 Identities=28% Similarity=0.368 Sum_probs=50.1
Q ss_pred EEEcc-chhHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHCC---cc----cchhc---ccc----c--CCCCeeEEE
Q 012352 385 VVIGA-GGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGG---HA----LSLAD---LEN----F--NPEDGMILA 446 (465)
Q Consensus 385 lV~Ga-Gg~g~ai~~~L~~~G-~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---l~~----~--~~~~~DilI 446 (465)
+|+|+ +|+|++++..|++.| ++|+++.|+.+++++++++++. .. .|+.+ +.+ . ..+..|+||
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 57887 599999999999999 8999999999998888877642 11 12211 111 0 235689999
Q ss_pred ecCCCC
Q 012352 447 NTTSIG 452 (465)
Q Consensus 447 naT~~g 452 (465)
|++++.
T Consensus 81 nnAG~~ 86 (308)
T PLN00015 81 CNAAVY 86 (308)
T ss_pred ECCCcC
Confidence 999874
No 318
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.47 E-value=0.0026 Score=60.58 Aligned_cols=71 Identities=28% Similarity=0.224 Sum_probs=48.2
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccch----hcccccCCCCeeEEEecCCCC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL----ADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~----~~l~~~~~~~~DilInaT~~g 452 (465)
+++|+++|+|+ |++|++++..|++.|++|++++|+.... ...++.....++ +++.+ ..+..|+|||+++..
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~D~~~~~~~~~~-~~~~id~lv~~ag~~ 78 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD--LSGNFHFLQLDLSDDLEPLFD-WVPSVDILCNTAGIL 78 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc--cCCcEEEEECChHHHHHHHHH-hhCCCCEEEECCCCC
Confidence 56789999998 5999999999999999999999985431 111110001222 22222 346789999998753
No 319
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=96.44 E-value=0.01 Score=60.64 Aligned_cols=70 Identities=20% Similarity=0.284 Sum_probs=51.8
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEEC---CHHHHHHHHHHHCCcccchhc--c--cccCCCCeeEEEecCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANR---TYDRARELAETVGGHALSLAD--L--ENFNPEDGMILANTTSI 451 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R---~~~~a~~la~~~~~~~~~~~~--l--~~~~~~~~DilInaT~~ 451 (465)
.+++|+|+|+|++|..++..++..|++|++++| ++++. +++++++...+...+ + .. ....+|++|++++.
T Consensus 172 ~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~-~~~~~~Ga~~v~~~~~~~~~~~-~~~~~d~vid~~g~ 248 (355)
T cd08230 172 NPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKA-DIVEELGATYVNSSKTPVAEVK-LVGEFDLIIEATGV 248 (355)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCCEEecCCccchhhhh-hcCCCCEEEECcCC
Confidence 478999999999999999999999999999998 45554 467778765433211 1 01 22468999999974
No 320
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=96.43 E-value=0.01 Score=56.62 Aligned_cols=70 Identities=23% Similarity=0.281 Sum_probs=48.8
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHHC---Cc--c--cchhc---c-------cccCCCCe
Q 012352 382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVG---GH--A--LSLAD---L-------ENFNPEDG 442 (465)
Q Consensus 382 k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R-~~~~a~~la~~~~---~~--~--~~~~~---l-------~~~~~~~~ 442 (465)
|.+||+|+ |++|+.++..|++.|++|+++.| +.++.+++.+++. .. . .++.+ + .+ ..+..
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~i 79 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEA-ELGPI 79 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHH-HcCCC
Confidence 57899997 69999999999999998888877 7766666554432 11 1 12211 1 11 24568
Q ss_pred eEEEecCCCC
Q 012352 443 MILANTTSIG 452 (465)
Q Consensus 443 DilInaT~~g 452 (465)
|+|||+++..
T Consensus 80 d~vi~~ag~~ 89 (242)
T TIGR01829 80 DVLVNNAGIT 89 (242)
T ss_pred cEEEECCCCC
Confidence 9999998865
No 321
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=96.42 E-value=0.0055 Score=59.88 Aligned_cols=36 Identities=25% Similarity=0.352 Sum_probs=32.4
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECC
Q 012352 378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT 413 (465)
Q Consensus 378 ~l~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~ 413 (465)
.+++++|+|+|+||.|..++..|+..|+ ++++++.+
T Consensus 29 ~L~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 29 KLKAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred HhcCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 3567899999999999999999999998 99999754
No 322
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.41 E-value=0.014 Score=55.61 Aligned_cols=74 Identities=35% Similarity=0.495 Sum_probs=50.1
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHH-HHHHHHHHHC---Ccc--c--chhc---c-------cccCC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-RARELAETVG---GHA--L--SLAD---L-------ENFNP 439 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~-~a~~la~~~~---~~~--~--~~~~---l-------~~~~~ 439 (465)
+++|+++|+|+ |++|++++..|.+.|++|++..|+.. +.+.+.+.+. ... + ++.+ + .+ ..
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~ 81 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKA-EF 81 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-Hc
Confidence 45789999998 69999999999999999988877654 3444544442 111 1 2211 1 11 23
Q ss_pred CCeeEEEecCCCCC
Q 012352 440 EDGMILANTTSIGM 453 (465)
Q Consensus 440 ~~~DilInaT~~gm 453 (465)
...|.||++++...
T Consensus 82 ~~id~vi~~ag~~~ 95 (248)
T PRK05557 82 GGVDILVNNAGITR 95 (248)
T ss_pred CCCCEEEECCCcCC
Confidence 46899999998654
No 323
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.41 E-value=0.0066 Score=60.63 Aligned_cols=40 Identities=30% Similarity=0.331 Sum_probs=36.6
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELA 421 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la 421 (465)
++|.|+|+|.+|.+++..|+..|.+|++++|++++.+.+.
T Consensus 5 ~kI~vIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 44 (292)
T PRK07530 5 KKVGVIGAGQMGNGIAHVCALAGYDVLLNDVSADRLEAGL 44 (292)
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 6799999999999999999999999999999998877644
No 324
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=96.40 E-value=0.0052 Score=59.26 Aligned_cols=34 Identities=29% Similarity=0.446 Sum_probs=30.9
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEEC
Q 012352 379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANR 412 (465)
Q Consensus 379 l~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R 412 (465)
+.+++|+|+|+||+|..++..|+..|+ ++++++.
T Consensus 19 L~~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~ 53 (228)
T cd00757 19 LKNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDD 53 (228)
T ss_pred HhCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 567899999999999999999999999 9998853
No 325
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=96.40 E-value=0.0045 Score=61.78 Aligned_cols=40 Identities=20% Similarity=0.221 Sum_probs=36.2
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE 422 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~ 422 (465)
+|.|+|.|-+|.+++..|++.|.+|++++|++++.+.+.+
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~ 40 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGYQLHVTTIGPEVADELLA 40 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH
Confidence 3789999999999999999999999999999998877654
No 326
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=96.39 E-value=0.0079 Score=60.35 Aligned_cols=41 Identities=17% Similarity=0.293 Sum_probs=37.8
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET 423 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~ 423 (465)
++.|+|.|-+|.+++..|.+.|.+|+++||++++.+++.+.
T Consensus 3 ~Ig~IGlG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~ 43 (296)
T PRK15461 3 AIAFIGLGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDK 43 (296)
T ss_pred eEEEEeeCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHc
Confidence 68999999999999999999999999999999998887653
No 327
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=96.36 E-value=0.012 Score=56.38 Aligned_cols=75 Identities=31% Similarity=0.459 Sum_probs=51.2
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEE-ECCHHHHHHHHHHHCC---cc----cchh---ccccc------CCC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVGG---HA----LSLA---DLENF------NPE 440 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~-~R~~~~a~~la~~~~~---~~----~~~~---~l~~~------~~~ 440 (465)
+++|+++|+|+ |++|++++..|++.|++|++. .|++++.+++.+++.. .. .++. .+.+. ..+
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG 83 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 56899999997 599999999999999987765 4566776666655421 11 1221 11110 235
Q ss_pred CeeEEEecCCCCC
Q 012352 441 DGMILANTTSIGM 453 (465)
Q Consensus 441 ~~DilInaT~~gm 453 (465)
..|+||++++...
T Consensus 84 ~id~vi~~ag~~~ 96 (247)
T PRK12935 84 KVDILVNNAGITR 96 (247)
T ss_pred CCCEEEECCCCCC
Confidence 6899999998753
No 328
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.35 E-value=0.0034 Score=63.55 Aligned_cols=40 Identities=18% Similarity=0.135 Sum_probs=35.9
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHH
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDR 416 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~ 416 (465)
..+.+|++.|+|.|.+|+.++..|..+|++|+.++|+.++
T Consensus 132 ~~l~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~ 171 (312)
T PRK15469 132 YHREDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKS 171 (312)
T ss_pred CCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 3577899999999999999999999999999999987643
No 329
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=96.34 E-value=0.0073 Score=60.86 Aligned_cols=41 Identities=32% Similarity=0.401 Sum_probs=37.8
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET 423 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~ 423 (465)
++.|+|+|.+|.+++..|++.|.+|++++|++++.+++.+.
T Consensus 3 kI~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~ 43 (325)
T PRK00094 3 KIAVLGAGSWGTALAIVLARNGHDVTLWARDPEQAAEINAD 43 (325)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHc
Confidence 68999999999999999999999999999999988887764
No 330
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.32 E-value=0.0088 Score=63.39 Aligned_cols=66 Identities=29% Similarity=0.404 Sum_probs=47.7
Q ss_pred EEEEEc-cchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCC
Q 012352 383 LFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 383 ~vlV~G-aGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~ 451 (465)
++.|+| .|++|.+++..|.+.|.+|++++|+++++.+++.+++.... .+..+ ...++|+||-|+|.
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~--~~~~e-~~~~aDvVIlavp~ 68 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYA--NDNID-AAKDADIVIISVPI 68 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeec--cCHHH-HhccCCEEEEecCH
Confidence 588997 69999999999999999999999999888777777653211 11111 22345666666664
No 331
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=96.31 E-value=0.027 Score=54.44 Aligned_cols=90 Identities=21% Similarity=0.210 Sum_probs=62.0
Q ss_pred HHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEE-EEEC----------CHHHHHHHHH
Q 012352 354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANR----------TYDRARELAE 422 (465)
Q Consensus 354 ~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~-i~~R----------~~~~a~~la~ 422 (465)
+.|...+++..+... +.++.+++++|.|.|.+|+.++..|.+.|++|+ |.+. +.+...++.+
T Consensus 11 g~Gv~~~~~~~~~~~-------~~~l~~~~v~I~G~G~VG~~~a~~L~~~g~~vv~v~D~~g~~~~~~Gld~~~l~~~~~ 83 (227)
T cd01076 11 GRGVAYATREALKKL-------GIGLAGARVAIQGFGNVGSHAARFLHEAGAKVVAVSDSDGTIYNPDGLDVPALLAYKK 83 (227)
T ss_pred hHHHHHHHHHHHHhc-------CCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHHHH
Confidence 567777766544321 246889999999999999999999999999877 7777 7777766665
Q ss_pred HHCC-------cccchhcccccCCCCeeEEEecCCCCC
Q 012352 423 TVGG-------HALSLADLENFNPEDGMILANTTSIGM 453 (465)
Q Consensus 423 ~~~~-------~~~~~~~l~~~~~~~~DilInaT~~gm 453 (465)
+.+. ..++.+++- ..++|++|-|+.-+.
T Consensus 84 ~~g~l~~~~~~~~~~~~~i~---~~~~Dvlip~a~~~~ 118 (227)
T cd01076 84 EHGSVLGFPGAERITNEELL---ELDCDILIPAALENQ 118 (227)
T ss_pred hcCCcccCCCceecCCccce---eecccEEEecCccCc
Confidence 5442 111112221 136899999986543
No 332
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.31 E-value=0.0054 Score=59.57 Aligned_cols=75 Identities=23% Similarity=0.227 Sum_probs=53.0
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH-CCcc--cchhc----ccccCC-CCeeEEEe
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV-GGHA--LSLAD----LENFNP-EDGMILAN 447 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~-~~~~--~~~~~----l~~~~~-~~~DilIn 447 (465)
...+.++++|+|+ |++|+.++..|.+.|++|+.+.|+.+++.++.... +... .++.+ +.+ .+ .++|+||+
T Consensus 13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~-~~~~~~d~vi~ 91 (251)
T PLN00141 13 ENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVE-AIGDDSDAVIC 91 (251)
T ss_pred ccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHH-HhhcCCCEEEE
Confidence 3456789999997 79999999999999999999999988766543221 1111 13322 222 34 46899999
Q ss_pred cCCCC
Q 012352 448 TTSIG 452 (465)
Q Consensus 448 aT~~g 452 (465)
+++..
T Consensus 92 ~~g~~ 96 (251)
T PLN00141 92 ATGFR 96 (251)
T ss_pred CCCCC
Confidence 98764
No 333
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.30 E-value=0.016 Score=55.54 Aligned_cols=74 Identities=27% Similarity=0.430 Sum_probs=48.2
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHH---CCc--c--cchh----------cccccCC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETV---GGH--A--LSLA----------DLENFNP 439 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R-~~~~a~~la~~~---~~~--~--~~~~----------~l~~~~~ 439 (465)
+++++++|+|+ |++|++++..|++.|+++++..| +.+...+....+ +.. . .++. ++.+ ..
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~ 82 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATID-RY 82 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHH-Hc
Confidence 56789999998 58999999999999998877664 344444333322 211 1 1221 1111 24
Q ss_pred CCeeEEEecCCCCC
Q 012352 440 EDGMILANTTSIGM 453 (465)
Q Consensus 440 ~~~DilInaT~~gm 453 (465)
...|.||++++.+.
T Consensus 83 ~~~d~vi~~ag~~~ 96 (252)
T PRK06077 83 GVADILVNNAGLGL 96 (252)
T ss_pred CCCCEEEECCCCCC
Confidence 57899999998754
No 334
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=96.28 E-value=0.015 Score=59.07 Aligned_cols=71 Identities=21% Similarity=0.275 Sum_probs=52.4
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcc-cchhc--cccc--CCCCeeEEEecCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLAD--LENF--NPEDGMILANTTSI 451 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~-~~~~~--l~~~--~~~~~DilInaT~~ 451 (465)
.+++|+|+|+|++|.+++..++..|+ +|+++++++++.+ ++.+++... ++..+ +.+. ..+.+|++|++++.
T Consensus 169 ~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~-~a~~lGa~~vi~~~~~~~~~~~~~~g~~D~vid~~G~ 245 (343)
T PRK09880 169 QGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLS-LAREMGADKLVNPQNDDLDHYKAEKGYFDVSFEVSGH 245 (343)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHH-HHHHcCCcEEecCCcccHHHHhccCCCCCEEEECCCC
Confidence 47899999999999999999999999 7999999988854 666787532 33211 1110 12358999999875
No 335
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=96.28 E-value=0.011 Score=59.96 Aligned_cols=75 Identities=19% Similarity=0.267 Sum_probs=55.9
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcc-----cchh-cccccCCCCeeEEEecCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA-----LSLA-DLENFNPEDGMILANTTSI 451 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~-----~~~~-~l~~~~~~~~DilInaT~~ 451 (465)
.+++|.|+|+|.+|.++++.|+..|. ++.+++++.++++..+.++.... ..+. .-.+ .+.++|+||.+++.
T Consensus 5 ~~~ki~iiGaG~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~-~~~~adivIitag~ 83 (315)
T PRK00066 5 QHNKVVLVGDGAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYS-DCKDADLVVITAGA 83 (315)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHH-HhCCCCEEEEecCC
Confidence 46799999999999999999999996 79999999988887776664210 1110 1112 35789999999988
Q ss_pred CCCC
Q 012352 452 GMQP 455 (465)
Q Consensus 452 gm~~ 455 (465)
.-.|
T Consensus 84 ~~k~ 87 (315)
T PRK00066 84 PQKP 87 (315)
T ss_pred CCCC
Confidence 5544
No 336
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=96.27 E-value=0.0075 Score=61.34 Aligned_cols=41 Identities=32% Similarity=0.460 Sum_probs=37.0
Q ss_pred cccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHH
Q 012352 375 VSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD 415 (465)
Q Consensus 375 ~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~ 415 (465)
.+.++.||++-|+|.|.+|+++++.++..|++|..++|.+.
T Consensus 140 ~~~~l~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~ 180 (324)
T COG1052 140 LGFDLRGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN 180 (324)
T ss_pred cccCCCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 34578999999999999999999999988999999999864
No 337
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.27 E-value=0.025 Score=56.60 Aligned_cols=131 Identities=18% Similarity=0.287 Sum_probs=80.6
Q ss_pred HHHHHHcCCCeeEeccc--c--ccHHHHHHHh-hcCCCCeeEeccCchHHH--hhhccccCHHHHhccceeeEEEeccCC
Q 012352 273 NEAFKSVGFNGVFVHLL--V--DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVAKSIGAVNCIIRRQSDG 345 (465)
Q Consensus 273 n~~f~~~gl~~~y~~~~--~--~~l~~~~~~l-~~~~~~G~~vT~P~K~~v--~~~~d~~~~~A~~~gavNtv~~~~~~g 345 (465)
.+.++++|++.....++ + +++.+.++.+ .++.+.|+.|.+|.-..+ -..++.+++ .+.+...+..- -|
T Consensus 55 ~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p-~KDVDGl~~~n----~g 129 (297)
T PRK14168 55 IKTAHRLGFHEIQDNQSVDITEEELLALIDKYNNDDSIHGILVQLPLPKHINEKKVLNAIDP-DKDVDGFHPVN----VG 129 (297)
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCc-cccccccChhh----HH
Confidence 66789999997655443 2 3577777777 577899999999963211 111222221 12222222210 01
Q ss_pred eE-EEE------eccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHC----CCeEEEEECC
Q 012352 346 KL-FGY------NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAK----GARVVIANRT 413 (465)
Q Consensus 346 ~l-~G~------NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~----G~~v~i~~R~ 413 (465)
++ .|. -.--.|++.-|+.. +.++.||+|+|+|-+ =.|+-++..|.+. ++.|+++.+.
T Consensus 130 ~l~~~~~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~ 198 (297)
T PRK14168 130 RLMIGGDEVKFLPCTPAGIQEMLVRS-----------GVETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTR 198 (297)
T ss_pred HHhcCCCCCCCcCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCC
Confidence 11 111 11246666666653 367899999999998 5999999999988 6899999654
Q ss_pred HHHHHH
Q 012352 414 YDRARE 419 (465)
Q Consensus 414 ~~~a~~ 419 (465)
....++
T Consensus 199 T~~l~~ 204 (297)
T PRK14168 199 SKNLAR 204 (297)
T ss_pred CcCHHH
Confidence 333333
No 338
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.26 E-value=0.01 Score=59.70 Aligned_cols=41 Identities=24% Similarity=0.297 Sum_probs=37.4
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE 422 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~ 422 (465)
++|.|+|+|-+|.+++..|+..|++|++++++.++.+.+.+
T Consensus 5 ~~I~vIGaG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~ 45 (311)
T PRK06130 5 QNLAIIGAGTMGSGIAALFARKGLQVVLIDVMEGALERARG 45 (311)
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence 57999999999999999999999999999999988877655
No 339
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=96.26 E-value=0.011 Score=56.57 Aligned_cols=70 Identities=23% Similarity=0.351 Sum_probs=49.7
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEE-EECCHHHHHHHHHHHC---Cc--c--cchhc---c-------cccCCCCe
Q 012352 382 KLFVVIGA-GGAGKALAYGAKAKGARVVI-ANRTYDRARELAETVG---GH--A--LSLAD---L-------ENFNPEDG 442 (465)
Q Consensus 382 k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i-~~R~~~~a~~la~~~~---~~--~--~~~~~---l-------~~~~~~~~ 442 (465)
|+++|+|+ |++|++++..|.++|++|++ +.|+.++.+++..++. .. . .++.+ + .+ ..+..
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~-~~~~i 80 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQ-HDEPL 80 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHH-hCCCC
Confidence 57999998 69999999999999998876 5788887777665542 11 1 12211 1 11 24678
Q ss_pred eEEEecCCCC
Q 012352 443 MILANTTSIG 452 (465)
Q Consensus 443 DilInaT~~g 452 (465)
|+|||+++..
T Consensus 81 d~vi~~ag~~ 90 (247)
T PRK09730 81 AALVNNAGIL 90 (247)
T ss_pred CEEEECCCCC
Confidence 9999999864
No 340
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=96.26 E-value=0.012 Score=58.52 Aligned_cols=67 Identities=21% Similarity=0.213 Sum_probs=47.3
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCCC
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
+|.|+|.|-+|.+++.+|.+.|.+|++++|++++.+.+.+. +.......+. + ...++|+||-|+|..
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~-g~~~~~~~~~-~-~~~~aDlVilavp~~ 68 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIER-GLVDEASTDL-S-LLKDCDLVILALPIG 68 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-CCcccccCCH-h-HhcCCCEEEEcCCHH
Confidence 58899999999999999999999999999998887766442 2100000111 1 234678888887743
No 341
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.25 E-value=0.0032 Score=57.69 Aligned_cols=65 Identities=23% Similarity=0.266 Sum_probs=48.4
Q ss_pred EEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---ccccCCCCeeEEEecCCCC
Q 012352 384 FVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENFNPEDGMILANTTSIG 452 (465)
Q Consensus 384 vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---l~~~~~~~~DilInaT~~g 452 (465)
|+|+|+ |.+|+.++..|.+.|++|+++.|++++.++ ..+... .++.+ +.+ .+.++|.||++.+..
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~-al~~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKA-ALKGADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHH-HHTTSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhh-hhhhcchhhhhhhhh
Confidence 689997 899999999999999999999999998777 111122 23322 333 456789999988643
No 342
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.24 E-value=0.01 Score=60.26 Aligned_cols=40 Identities=30% Similarity=0.323 Sum_probs=35.9
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELA 421 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la 421 (465)
++|.|+|+|-||+.++..++..|++|++++++++..+.+.
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~ 47 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEAALR 47 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 6899999999999999999999999999999988765543
No 343
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=96.23 E-value=0.013 Score=59.95 Aligned_cols=73 Identities=16% Similarity=0.071 Sum_probs=52.9
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--c--c--cchh---cccccCCCCeeEEEec
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--H--A--LSLA---DLENFNPEDGMILANT 448 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~--~--~--~~~~---~l~~~~~~~~DilIna 448 (465)
-+++++||+|+ |.+|+.++..|.+.|++|+++.|+.++.+.+...+.. . . .++. ++.+ .+.++|.||++
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~d~Vih~ 86 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDE-AVKGCDGVFHV 86 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHH-HHcCCCEEEEC
Confidence 45789999997 7899999999999999999999998877766555421 1 1 1222 1222 24568999999
Q ss_pred CCCC
Q 012352 449 TSIG 452 (465)
Q Consensus 449 T~~g 452 (465)
++..
T Consensus 87 A~~~ 90 (353)
T PLN02896 87 AASM 90 (353)
T ss_pred Cccc
Confidence 8754
No 344
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.22 E-value=0.012 Score=58.15 Aligned_cols=36 Identities=22% Similarity=0.357 Sum_probs=32.7
Q ss_pred ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECC
Q 012352 378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT 413 (465)
Q Consensus 378 ~l~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~ 413 (465)
.+.+++|+|+|.||+|..++..|+..|+ ++++++.+
T Consensus 27 kL~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 27 LFADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred HhcCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3678899999999999999999999998 99998865
No 345
>PRK12827 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.013 Score=55.91 Aligned_cols=75 Identities=27% Similarity=0.384 Sum_probs=50.4
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC----CHHHHHHHHHHHC---Ccc----cchhc---cccc------
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR----TYDRARELAETVG---GHA----LSLAD---LENF------ 437 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R----~~~~a~~la~~~~---~~~----~~~~~---l~~~------ 437 (465)
+++++++|+|+ |++|++++..|.+.|++|+++.| +.++.+++.+++. ... .++.+ +...
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE 83 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 56789999998 69999999999999999888654 4555566655542 111 12211 1110
Q ss_pred CCCCeeEEEecCCCCC
Q 012352 438 NPEDGMILANTTSIGM 453 (465)
Q Consensus 438 ~~~~~DilInaT~~gm 453 (465)
.....|.||++++...
T Consensus 84 ~~~~~d~vi~~ag~~~ 99 (249)
T PRK12827 84 EFGRLDILVNNAGIAT 99 (249)
T ss_pred HhCCCCEEEECCCCCC
Confidence 2356899999997653
No 346
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=96.22 E-value=0.0079 Score=57.86 Aligned_cols=38 Identities=32% Similarity=0.457 Sum_probs=34.2
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY 414 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~ 414 (465)
..+++|+++|+|+ |++|++++..|.+.|++|++++|+.
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~ 42 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF 42 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch
Confidence 3467899999998 5899999999999999999999986
No 347
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=96.21 E-value=0.0081 Score=61.29 Aligned_cols=73 Identities=19% Similarity=0.091 Sum_probs=49.0
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC--Cc--c--cchh---ccccc-CCCCeeEEEec
Q 012352 380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG--GH--A--LSLA---DLENF-NPEDGMILANT 448 (465)
Q Consensus 380 ~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~--~~--~--~~~~---~l~~~-~~~~~DilIna 448 (465)
++|++||+|+ |++|++++..|.+.|++|++++|+........+.++ .. . .++. ++.+. ...++|+|||+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 5789999997 789999999999999999999998765444333222 11 1 1221 22221 11246999999
Q ss_pred CCCC
Q 012352 449 TSIG 452 (465)
Q Consensus 449 T~~g 452 (465)
++..
T Consensus 83 A~~~ 86 (349)
T TIGR02622 83 AAQP 86 (349)
T ss_pred Cccc
Confidence 9754
No 348
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.21 E-value=0.0092 Score=59.23 Aligned_cols=66 Identities=17% Similarity=0.221 Sum_probs=48.2
Q ss_pred cEEEEEccchhHHHHHHHHHHCCC----eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCC
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGA----RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS 450 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~----~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~ 450 (465)
+++.+||+|-+|.+++..|.+.|. +|++++|+.++++.+.++++.... .+..+ ...++|+||-|.+
T Consensus 3 ~~IgfIG~G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~--~~~~e-~~~~aDiIiLavk 72 (272)
T PRK12491 3 KQIGFIGCGNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITIT--TNNNE-VANSADILILSIK 72 (272)
T ss_pred CeEEEECccHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEEe--CCcHH-HHhhCCEEEEEeC
Confidence 479999999999999999998873 699999999999888876653221 11111 1234577776665
No 349
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=96.21 E-value=0.01 Score=60.41 Aligned_cols=71 Identities=18% Similarity=0.212 Sum_probs=56.4
Q ss_pred CcEEEEEccchhHHHHHHHHHHC-CC-eEEEEECCHHHHHHHHHHHCCc----ccchhcccccCCCCeeEEEecCCCC
Q 012352 381 GKLFVVIGAGGAGKALAYGAKAK-GA-RVVIANRTYDRARELAETVGGH----ALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 381 ~k~vlV~GaGg~g~ai~~~L~~~-G~-~v~i~~R~~~~a~~la~~~~~~----~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
-+.+.|||+|..|+.-+.++... ++ +|.|++|+++.+++++..+... +...++..+ .+.++|+||.||+.-
T Consensus 130 a~~laiIGaG~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~-av~~aDiIvt~T~s~ 206 (330)
T COG2423 130 ASTLAIIGAGAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEE-AVEGADIVVTATPST 206 (330)
T ss_pred CcEEEEECCcHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHH-HhhcCCEEEEecCCC
Confidence 46899999999999999998764 66 8999999999999999877532 223344444 567899999999864
No 350
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.20 E-value=0.0099 Score=56.28 Aligned_cols=44 Identities=27% Similarity=0.425 Sum_probs=36.2
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHH-HHHHHHHHHC
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD-RARELAETVG 425 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~-~a~~la~~~~ 425 (465)
+++.|+|+|.+|.+++..|+..|++|+|.+|+.+ +.+.+++.++
T Consensus 2 ~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~ 46 (211)
T COG2085 2 MIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALG 46 (211)
T ss_pred cEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhc
Confidence 5789999999999999999999999999966554 5555566554
No 351
>PRK07041 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.016 Score=54.92 Aligned_cols=69 Identities=32% Similarity=0.415 Sum_probs=50.0
Q ss_pred EEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC--Cc--c--cchh---ccccc--CCCCeeEEEecCCCC
Q 012352 385 VVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG--GH--A--LSLA---DLENF--NPEDGMILANTTSIG 452 (465)
Q Consensus 385 lV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~--~~--~--~~~~---~l~~~--~~~~~DilInaT~~g 452 (465)
+|+|+ ||+|++++..|++.|++|+++.|+.++++.+.+.++ .. . .++. ++.+. ..+.+|++||+++..
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 47877 599999999999999999999999988888776662 21 1 1221 11110 245689999999875
Q ss_pred C
Q 012352 453 M 453 (465)
Q Consensus 453 m 453 (465)
.
T Consensus 81 ~ 81 (230)
T PRK07041 81 P 81 (230)
T ss_pred C
Confidence 4
No 352
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.19 E-value=0.01 Score=56.84 Aligned_cols=41 Identities=32% Similarity=0.575 Sum_probs=37.1
Q ss_pred EEEEEc-cchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 012352 383 LFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAET 423 (465)
Q Consensus 383 ~vlV~G-aGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~ 423 (465)
++.|+| +|.+|.+++..|.+.|.+|++++|++++++.+++.
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~ 43 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK 43 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence 588997 79999999999999999999999999998887764
No 353
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.18 E-value=0.015 Score=56.02 Aligned_cols=72 Identities=19% Similarity=0.227 Sum_probs=48.9
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHHC---Cc--c--cchhc----------ccccCCCC
Q 012352 381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETVG---GH--A--LSLAD----------LENFNPED 441 (465)
Q Consensus 381 ~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~-~~a~~la~~~~---~~--~--~~~~~----------l~~~~~~~ 441 (465)
+|+++|+|+ |++|++++..|++.|++|++++|+. +..++..+.+. .. . .++.+ +.+ ..+.
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~ 80 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQA-AWGR 80 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH-hcCC
Confidence 368999988 6999999999999999999998864 44444444432 11 1 12211 111 2357
Q ss_pred eeEEEecCCCCC
Q 012352 442 GMILANTTSIGM 453 (465)
Q Consensus 442 ~DilInaT~~gm 453 (465)
.|+||++++...
T Consensus 81 id~vi~~ag~~~ 92 (256)
T PRK12745 81 IDCLVNNAGVGV 92 (256)
T ss_pred CCEEEECCccCC
Confidence 899999997653
No 354
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.012 Score=55.80 Aligned_cols=70 Identities=23% Similarity=0.327 Sum_probs=49.5
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchh---cccc----cCCCCeeEEEecCCC
Q 012352 382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLA---DLEN----FNPEDGMILANTTSI 451 (465)
Q Consensus 382 k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~---~l~~----~~~~~~DilInaT~~ 451 (465)
|+++|+|+ |++|++++..|.+.|++|+++.|+.++.+++... +... .++. ++.+ ......|++|++++.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQAL-GAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhc-cceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 57899987 6999999999999999999999998887776542 2221 2221 1111 111358999999876
Q ss_pred C
Q 012352 452 G 452 (465)
Q Consensus 452 g 452 (465)
.
T Consensus 81 ~ 81 (222)
T PRK06953 81 Y 81 (222)
T ss_pred c
Confidence 4
No 355
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.019 Score=54.15 Aligned_cols=71 Identities=20% Similarity=0.305 Sum_probs=50.7
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-cc--cchh---ccccc--CCCCeeEEEecCCC
Q 012352 381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA--LSLA---DLENF--NPEDGMILANTTSI 451 (465)
Q Consensus 381 ~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~~--~~~~---~l~~~--~~~~~DilInaT~~ 451 (465)
.|+++|+|+ |++|++++..|.+. ++|++++|+.++.+++.+.... .. .++. ++.+. ...+.|+||++++.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 468999998 68999999999998 9999999998887777654422 11 2222 22211 22368999999876
Q ss_pred C
Q 012352 452 G 452 (465)
Q Consensus 452 g 452 (465)
.
T Consensus 82 ~ 82 (227)
T PRK08219 82 A 82 (227)
T ss_pred C
Confidence 4
No 356
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.16 E-value=0.0095 Score=57.70 Aligned_cols=35 Identities=23% Similarity=0.374 Sum_probs=32.1
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECC
Q 012352 379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT 413 (465)
Q Consensus 379 l~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~ 413 (465)
+++++|+|+|.||+|..++..|+..|+ ++++++.+
T Consensus 9 L~~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D 44 (231)
T cd00755 9 LRNAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFD 44 (231)
T ss_pred HhCCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 567899999999999999999999999 99999864
No 357
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=96.16 E-value=0.0096 Score=59.87 Aligned_cols=72 Identities=21% Similarity=0.167 Sum_probs=48.9
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC-----C--cc--cchhc---ccccCCCCeeEEE
Q 012352 380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-----G--HA--LSLAD---LENFNPEDGMILA 446 (465)
Q Consensus 380 ~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~-----~--~~--~~~~~---l~~~~~~~~DilI 446 (465)
.+|+++|+|+ |.+|+.++..|.+.|++|++..|+..+.+.+..... . .. .++.+ +.+ .+.++|+||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~d~vi 82 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQ-AIEGCDAVF 82 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHH-HHhCCCEEE
Confidence 4789999997 789999999999999999988888765444332211 1 11 12211 222 245689999
Q ss_pred ecCCCC
Q 012352 447 NTTSIG 452 (465)
Q Consensus 447 naT~~g 452 (465)
++++..
T Consensus 83 h~A~~~ 88 (322)
T PLN02986 83 HTASPV 88 (322)
T ss_pred EeCCCc
Confidence 998753
No 358
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.15 E-value=0.014 Score=58.35 Aligned_cols=39 Identities=23% Similarity=0.319 Sum_probs=35.9
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHH
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL 420 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~l 420 (465)
++|.|+|+|-+|.+++..|+..|++|+++++++++.+..
T Consensus 4 ~~I~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~ 42 (291)
T PRK06035 4 KVIGVVGSGVMGQGIAQVFARTGYDVTIVDVSEEILKNA 42 (291)
T ss_pred cEEEEECccHHHHHHHHHHHhcCCeEEEEeCCHHHHHHH
Confidence 689999999999999999999999999999999887654
No 359
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.15 E-value=0.012 Score=57.90 Aligned_cols=44 Identities=27% Similarity=0.446 Sum_probs=39.1
Q ss_pred cEEEEEccchhHHHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHC
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKG---ARVVIANRTYDRARELAETVG 425 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G---~~v~i~~R~~~~a~~la~~~~ 425 (465)
.++.|+|+|.+|.+++..|.+.| .+|++++|++++++.+.+.++
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g 49 (267)
T PRK11880 3 KKIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYG 49 (267)
T ss_pred CEEEEEechHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcC
Confidence 36899999999999999999988 589999999999888887665
No 360
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.14 E-value=0.013 Score=58.95 Aligned_cols=40 Identities=30% Similarity=0.325 Sum_probs=36.8
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE 422 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~ 422 (465)
+|.|+|.|-+|.+++..|.+.|.+|+++||++++.+.+.+
T Consensus 2 ~Ig~IGlG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~ 41 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAE 41 (301)
T ss_pred EEEEEcccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence 5889999999999999999999999999999999888754
No 361
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=96.14 E-value=0.014 Score=59.12 Aligned_cols=68 Identities=22% Similarity=0.275 Sum_probs=45.3
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCC
Q 012352 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY-DRARELAETVGGHALSLADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 379 l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~-~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~ 451 (465)
+++|++.|+|.|.+|.+++..|.+.|.+|+++.|.. ++.+.+. +.+....+ ..+ ...++|+||.++|-
T Consensus 1 l~~kkIgiIG~G~mG~AiA~~L~~sG~~Viv~~~~~~~~~~~a~-~~Gv~~~s---~~e-a~~~ADiVvLaVpp 69 (314)
T TIGR00465 1 LKGKTVAIIGYGSQGHAQALNLRDSGLNVIVGLRKGGASWKKAT-EDGFKVGT---VEE-AIPQADLIMNLLPD 69 (314)
T ss_pred CCcCEEEEEeEcHHHHHHHHHHHHCCCeEEEEECcChhhHHHHH-HCCCEECC---HHH-HHhcCCEEEEeCCc
Confidence 357899999999999999999999999887766553 3333333 33432222 112 23456777777763
No 362
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.13 E-value=0.014 Score=58.91 Aligned_cols=39 Identities=26% Similarity=0.217 Sum_probs=35.2
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHH
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL 420 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~l 420 (465)
++|.|+|+|-+|.+++..|++.|++|++++|+++..+..
T Consensus 3 ~~V~VIG~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~ 41 (308)
T PRK06129 3 GSVAIIGAGLIGRAWAIVFARAGHEVRLWDADPAAAAAA 41 (308)
T ss_pred cEEEEECccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHH
Confidence 469999999999999999999999999999998876654
No 363
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.13 E-value=0.013 Score=58.90 Aligned_cols=40 Identities=20% Similarity=0.228 Sum_probs=36.5
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE 422 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~ 422 (465)
++.++|.|.+|.+++..|.+.|.+|+++||++++++.+.+
T Consensus 2 ~Ig~IGlG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~ 41 (299)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGK 41 (299)
T ss_pred EEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 5789999999999999999999999999999999887753
No 364
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.12 E-value=0.014 Score=62.65 Aligned_cols=73 Identities=23% Similarity=0.279 Sum_probs=51.6
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCCCC
Q 012352 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGM 453 (465)
Q Consensus 379 l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~gm 453 (465)
+.+++|+|+|.|++|++++..|...|++|+++++.+.+.+.+ ++.+.....-....+ .+..+|+||.+.++..
T Consensus 10 ~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l-~~~g~~~~~~~~~~~-~l~~~D~VV~SpGi~~ 82 (488)
T PRK03369 10 LPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPH-AERGVATVSTSDAVQ-QIADYALVVTSPGFRP 82 (488)
T ss_pred cCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HhCCCEEEcCcchHh-HhhcCCEEEECCCCCC
Confidence 357899999999999999999999999999999876655443 333432211111111 2346799999988764
No 365
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=96.11 E-value=0.0077 Score=64.49 Aligned_cols=83 Identities=20% Similarity=0.277 Sum_probs=60.1
Q ss_pred ccCCcEEEEEccch-hHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCc-----c----cchhc---ccccCCC--C
Q 012352 378 ALAGKLFVVIGAGG-AGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH-----A----LSLAD---LENFNPE--D 441 (465)
Q Consensus 378 ~l~~k~vlV~GaGg-~g~ai~~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~-----~----~~~~~---l~~~~~~--~ 441 (465)
.++||+|+|+|+|| +|+.+|..+++.+. ++.+++|++-+...+..++... . .++.| +.. .+. +
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~-~~~~~k 325 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVER-AMEGHK 325 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHH-HHhcCC
Confidence 46899999999975 99999999999998 9999999999988887777542 0 12222 222 223 4
Q ss_pred eeEEEecCCCCCCCCCCCCC
Q 012352 442 GMILANTTSIGMQPKVDETP 461 (465)
Q Consensus 442 ~DilInaT~~gm~~~~~~~p 461 (465)
.|+|++|+..=.-|.....|
T Consensus 326 vd~VfHAAA~KHVPl~E~nP 345 (588)
T COG1086 326 VDIVFHAAALKHVPLVEYNP 345 (588)
T ss_pred CceEEEhhhhccCcchhcCH
Confidence 89999998765444333334
No 366
>PRK07574 formate dehydrogenase; Provisional
Probab=96.10 E-value=0.0082 Score=62.46 Aligned_cols=38 Identities=24% Similarity=0.296 Sum_probs=35.6
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY 414 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~ 414 (465)
..+.+|++.|+|.|.+|+.++..|+..|++|+.++|+.
T Consensus 188 ~~L~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~ 225 (385)
T PRK07574 188 YDLEGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHR 225 (385)
T ss_pred eecCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCC
Confidence 45889999999999999999999999999999999986
No 367
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=96.09 E-value=0.01 Score=59.21 Aligned_cols=41 Identities=22% Similarity=0.272 Sum_probs=36.9
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE 422 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~ 422 (465)
.++.|+|.|.+|.+++..|++.|.+|++++|++++.+.+.+
T Consensus 3 ~~IgviG~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~ 43 (296)
T PRK11559 3 MKVGFIGLGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIA 43 (296)
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH
Confidence 36899999999999999999999999999999998877653
No 368
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit. This model describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea. The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.
Probab=96.08 E-value=0.63 Score=51.17 Aligned_cols=210 Identities=14% Similarity=0.136 Sum_probs=139.6
Q ss_pred CHHHHHHHHHhhhhcCCCEEEEE----ecC---CCCCCchhHHHHHHhhC-CCcEEEEeccCCCCCCCCCCHHHHHHHHH
Q 012352 34 SVDKMVVDMGKANASGADLVEIR----LDG---LKNFNPRENIKTLIKES-PVPTLFTYRPIWEGGQYDGDENERVDVLR 105 (465)
Q Consensus 34 t~~e~~~~~~~~~~~~~D~vElR----lD~---l~~~~~~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~~~~~~~l~ 105 (465)
+.++.+.-++.+...|.+.+|.- .|. |-.-++.+.++.+++.. +.++..-+|..+-=|...-.++-..+.++
T Consensus 19 ~t~dkl~ia~~L~~~Gv~~IE~~GGatfd~~~~f~~e~~~e~l~~l~~~~~~~~l~~L~Rg~N~~G~~~ypddvv~~~v~ 98 (582)
T TIGR01108 19 RTEDMLPIAEKLDDVGYWSLEVWGGATFDACIRFLNEDPWERLRELKKALPNTPLQMLLRGQNLLGYRHYADDVVERFVK 98 (582)
T ss_pred CHHHHHHHHHHHHHcCCCEEEecCCcccccccccCCCCHHHHHHHHHHhCCCCEEEEEEccccccccccCchhhHHHHHH
Confidence 44555555555566799999994 452 22335666787776543 56777778977776765556666677888
Q ss_pred HHHHhCCcEEEEeeccc--cchhHHHHhcCCCCcEEEEEe-ccCCCCC--CHHHHHHHHHHHHHcCCCEEEEEeec--CC
Q 012352 106 LAMELGADYIDVELQVA--REFNDSIRGKKPEKCKVIVSS-HNYQYTP--SVEDLSNLVARIQASGADIVKFATTA--LD 178 (465)
Q Consensus 106 ~~~~~~~~~iDiEl~~~--~~~~~~l~~~~~~~~~iI~S~-H~f~~tp--s~~el~~~~~~~~~~gadivKia~~~--~~ 178 (465)
.+.+.|++.+-|=.... +.....+..++..+..+.++. +.+ +| +.+.+.+..+++.+.|||.+=|+=|. -+
T Consensus 99 ~a~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G~~v~~~i~~t~--~p~~~~~~~~~~~~~~~~~Gad~I~i~Dt~G~~~ 176 (582)
T TIGR01108 99 KAVENGMDVFRIFDALNDPRNLQAAIQAAKKHGAHAQGTISYTT--SPVHTLETYLDLAEELLEMGVDSICIKDMAGILT 176 (582)
T ss_pred HHHHCCCCEEEEEEecCcHHHHHHHHHHHHHcCCEEEEEEEecc--CCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcC
Confidence 99999999887754332 222223333344455565542 233 55 67889999999999999998888665 57
Q ss_pred HHHHHHHHHHhcc-CCCCEEE--EecCccchhhhhhccccCCccccccccCccCCCCCCCChhhHHhhhcc
Q 012352 179 ITDVARVFQITVH-SQVPIIG--LVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF 246 (465)
Q Consensus 179 ~~D~~~ll~~~~~-~~~p~i~--~~MG~~G~~sRi~~~~~Gs~~tf~~~~~~~~sApGQ~~~~~l~~~~~~ 246 (465)
|.++.++.+.+.. .+.|+-. .+.-.++..+-+..-.-|....=+++.. .....||+++.++-..++.
T Consensus 177 P~~v~~lv~~lk~~~~~pi~~H~Hnt~Gla~An~laAveaGa~~vd~ai~G-lG~~tGn~~le~vv~~L~~ 246 (582)
T TIGR01108 177 PKAAYELVSALKKRFGLPVHLHSHATTGMAEMALLKAIEAGADGIDTAISS-MSGGTSHPPTETMVAALRG 246 (582)
T ss_pred HHHHHHHHHHHHHhCCCceEEEecCCCCcHHHHHHHHHHhCCCEEEecccc-ccccccChhHHHHHHHHHh
Confidence 8999999887654 3556543 4555556666666666777666566654 3457899999998877663
No 369
>cd07937 DRE_TIM_PC_TC_5S Pyruvate carboxylase and Transcarboxylase 5S, carboxyltransferase domain. This family includes the carboxyltransferase domains of pyruvate carboxylase (PC) and the transcarboxylase (TC) 5S subunit. Transcarboxylase 5S is a cobalt-dependent metalloenzyme subunit of the biotin-dependent transcarboxylase multienzyme complex. Transcarboxylase 5S transfers carbon dioxide from the 1.3S biotin to pyruvate in the second of two carboxylation reactions catalyzed by TC. The first reaction involves the transfer of carbon dioxide from methylmalonyl-CoA to the 1.3S biotin, and is catalyzed by the 12S subunit. These two steps allow a carboxylate group to be transferred from oxaloacetate to propionyl-CoA to yield pyruvate and methylmalonyl-CoA. The catalytic domain of transcarboxylase 5S has a canonical TIM-barrel fold with a large C-terminal extension that forms a funnel leading to the active site. Transcarboxylase 5S forms a homodimer and there are six dimers per complex
Probab=96.07 E-value=1.4 Score=43.70 Aligned_cols=212 Identities=14% Similarity=0.090 Sum_probs=130.9
Q ss_pred CHHHHHHHHHhhhhcCCCEEEEEecCC-------CCCCchhHHHHHHhh-CCCcEEEEeccCCCCCCCCCCHHHHHHHHH
Q 012352 34 SVDKMVVDMGKANASGADLVEIRLDGL-------KNFNPRENIKTLIKE-SPVPTLFTYRPIWEGGQYDGDENERVDVLR 105 (465)
Q Consensus 34 t~~e~~~~~~~~~~~~~D~vElRlD~l-------~~~~~~~~l~~l~~~-~~~PiI~T~R~~~eGG~~~~~~~~~~~~l~ 105 (465)
+.++.+.-+..+.+.|+|.+|.=--.- ...++.+.++.+.+. .+.++..-+|..+.-|..+.+.+-..+.++
T Consensus 19 ~~~~~~~ia~~L~~~Gv~~iE~G~~a~~~~~~~~~~~~~~e~i~~~~~~~~~~~l~~~~r~~~~~~~~~~p~~~~~~di~ 98 (275)
T cd07937 19 RTEDMLPIAEALDEAGFFSLEVWGGATFDVCMRFLNEDPWERLRELRKAMPNTPLQMLLRGQNLVGYRHYPDDVVELFVE 98 (275)
T ss_pred cHHHHHHHHHHHHHcCCCEEEccCCcchhhhccccCCCHHHHHHHHHHhCCCCceehhcccccccCccCCCcHHHHHHHH
Confidence 344444445555677999999874321 122445566666543 356788778876666654445555667788
Q ss_pred HHHHhCCcEEEEeecccc--chhHHHHhcCCCCcEEEEEecc-CCCCCCHHHHHHHHHHHHHcCCCEEEEEeec--CCHH
Q 012352 106 LAMELGADYIDVELQVAR--EFNDSIRGKKPEKCKVIVSSHN-YQYTPSVEDLSNLVARIQASGADIVKFATTA--LDIT 180 (465)
Q Consensus 106 ~~~~~~~~~iDiEl~~~~--~~~~~l~~~~~~~~~iI~S~H~-f~~tps~~el~~~~~~~~~~gadivKia~~~--~~~~ 180 (465)
.+.+.|+++|-|-....+ ...+.+..++..+..+...... +....+.+.+.+..+++.+.|+|.+-++=+. -+|+
T Consensus 99 ~~~~~g~~~iri~~~~~~~~~~~~~i~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~ 178 (275)
T cd07937 99 KAAKNGIDIFRIFDALNDVRNLEVAIKAVKKAGKHVEGAICYTGSPVHTLEYYVKLAKELEDMGADSICIKDMAGLLTPY 178 (275)
T ss_pred HHHHcCCCEEEEeecCChHHHHHHHHHHHHHCCCeEEEEEEecCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCHH
Confidence 889999999888544322 1222233344456677665543 2223356789999999999999999888444 4689
Q ss_pred HHHHHHHHhccC-CCCEEEEecCcc--chhhhhhccccCCccccccccCccCCCCCCCChhhHHhhhcc
Q 012352 181 DVARVFQITVHS-QVPIIGLVMGER--GLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF 246 (465)
Q Consensus 181 D~~~ll~~~~~~-~~p~i~~~MG~~--G~~sRi~~~~~Gs~~tf~~~~~~~~sApGQ~~~~~l~~~~~~ 246 (465)
++.++++.+.+. +.|+-..+=-.. +...=+..-..|..+.=+++.. ..--.|+.+++++...++.
T Consensus 179 ~v~~lv~~l~~~~~~~l~~H~Hnd~GlA~aN~laA~~aGa~~vd~sv~G-lG~~aGN~~~E~l~~~L~~ 246 (275)
T cd07937 179 AAYELVKALKKEVGLPIHLHTHDTSGLAVATYLAAAEAGVDIVDTAISP-LSGGTSQPSTESMVAALRG 246 (275)
T ss_pred HHHHHHHHHHHhCCCeEEEEecCCCChHHHHHHHHHHhCCCEEEEeccc-ccCCcCChhHHHHHHHHHc
Confidence 999998886642 455555442222 3333333434565555455543 2234899999887766653
No 370
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=96.07 E-value=0.015 Score=54.03 Aligned_cols=41 Identities=24% Similarity=0.319 Sum_probs=34.3
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET 423 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~ 423 (465)
+|.|+|+|-+|++++..++..|++|++++++++..+...+.
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~ 41 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGYEVTLYDRSPEALERARKR 41 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhH
Confidence 58899999999999999999999999999999887665443
No 371
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=96.07 E-value=0.015 Score=55.84 Aligned_cols=71 Identities=34% Similarity=0.347 Sum_probs=49.7
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEE-ECCHHHHHHHHHHHC---Ccc----cchh---cc-------cccCCCCe
Q 012352 382 KLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVG---GHA----LSLA---DL-------ENFNPEDG 442 (465)
Q Consensus 382 k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~-~R~~~~a~~la~~~~---~~~----~~~~---~l-------~~~~~~~~ 442 (465)
|+++|+|+ ||+|++++..|++.|++|+++ .|+.++++++.+++. ... .++. ++ .+ ..+..
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~~i 81 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQS-AFGRL 81 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHH-hcCCC
Confidence 68999998 499999999999999987765 577777777665542 111 1221 11 11 23578
Q ss_pred eEEEecCCCCC
Q 012352 443 MILANTTSIGM 453 (465)
Q Consensus 443 DilInaT~~gm 453 (465)
|+||++++...
T Consensus 82 d~li~~ag~~~ 92 (248)
T PRK06947 82 DALVNNAGIVA 92 (248)
T ss_pred CEEEECCccCC
Confidence 99999998753
No 372
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.07 E-value=0.026 Score=50.39 Aligned_cols=39 Identities=26% Similarity=0.263 Sum_probs=34.8
Q ss_pred cccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHH
Q 012352 377 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYD 415 (465)
Q Consensus 377 ~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~ 415 (465)
.+++||+++|+|-+ -.|+.++..|.+.|+.|++++++..
T Consensus 24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~ 63 (140)
T cd05212 24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI 63 (140)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc
Confidence 67899999999998 7999999999999999999987543
No 373
>PLN03139 formate dehydrogenase; Provisional
Probab=96.06 E-value=0.0082 Score=62.46 Aligned_cols=39 Identities=26% Similarity=0.301 Sum_probs=35.8
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHH
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD 415 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~ 415 (465)
..+.+|++.|+|.|.+|+.++..|...|++|..++|+..
T Consensus 195 ~~L~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~ 233 (386)
T PLN03139 195 YDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKM 233 (386)
T ss_pred cCCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 468899999999999999999999999999999999753
No 374
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.05 E-value=0.02 Score=61.29 Aligned_cols=74 Identities=28% Similarity=0.297 Sum_probs=49.4
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHH---CCcccchhcccccCCCCeeEEEecCCCC
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY-DRARELAETV---GGHALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~-~~a~~la~~~---~~~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
..+.+++|+|+|+|++|.+++..|++.|++|+++++.. +....+.+.+ +.....-... . ....+|+||-++++.
T Consensus 12 ~~~~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~-~-~~~~~D~Vv~s~Gi~ 89 (480)
T PRK01438 12 SDWQGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGP-T-LPEDTDLVVTSPGWR 89 (480)
T ss_pred cCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc-c-ccCCCCEEEECCCcC
Confidence 45678999999999999999999999999999998543 3444444433 2211100011 1 123589999887664
No 375
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.05 E-value=0.0048 Score=54.11 Aligned_cols=45 Identities=33% Similarity=0.421 Sum_probs=36.0
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEE-EEECCHHHHHHHHHHHCC
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGG 426 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~~v~-i~~R~~~~a~~la~~~~~ 426 (465)
-++-|||+|..|.+++.+|.+.|++|. +++|+.+.++.++..++.
T Consensus 11 l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~ 56 (127)
T PF10727_consen 11 LKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGA 56 (127)
T ss_dssp -EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccc
Confidence 479999999999999999999999765 568999888888877754
No 376
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=96.04 E-value=0.016 Score=62.20 Aligned_cols=42 Identities=26% Similarity=0.314 Sum_probs=39.1
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET 423 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~ 423 (465)
.++-+||.|-||+.++..|.+.|++|+|+||++++++.+.+.
T Consensus 7 ~~IG~IGLG~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~ 48 (493)
T PLN02350 7 SRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVER 48 (493)
T ss_pred CCEEEEeeHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHh
Confidence 368999999999999999999999999999999999998764
No 377
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=95.98 E-value=0.0092 Score=60.38 Aligned_cols=38 Identities=37% Similarity=0.454 Sum_probs=35.0
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY 414 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~ 414 (465)
..+.||++.|+|.|.+|++++..++.+|++|..++|+.
T Consensus 141 ~~L~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~~ 178 (311)
T PRK08410 141 GEIKGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSG 178 (311)
T ss_pred cccCCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCCc
Confidence 35789999999999999999999999999999999964
No 378
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.98 E-value=0.019 Score=54.69 Aligned_cols=46 Identities=37% Similarity=0.583 Sum_probs=40.7
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV 424 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~ 424 (465)
+++|+++|+|+ |++|.+++..|.+.|++|+++.|+.++.+.+.+.+
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTL 49 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 46789999998 58999999999999999999999999888776554
No 379
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.017 Score=55.32 Aligned_cols=71 Identities=28% Similarity=0.323 Sum_probs=50.5
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC----Cc--c--cchhc---cccc---CCCCeeEEE
Q 012352 382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----GH--A--LSLAD---LENF---NPEDGMILA 446 (465)
Q Consensus 382 k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~----~~--~--~~~~~---l~~~---~~~~~DilI 446 (465)
|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+. .. . .++.+ +.+. .....|++|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv 81 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL 81 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence 68999997 699999999999999999999999988877766542 11 1 12211 1110 122469999
Q ss_pred ecCCCC
Q 012352 447 NTTSIG 452 (465)
Q Consensus 447 naT~~g 452 (465)
++++..
T Consensus 82 ~~ag~~ 87 (243)
T PRK07102 82 IAVGTL 87 (243)
T ss_pred ECCcCC
Confidence 998753
No 380
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=95.97 E-value=0.0076 Score=61.29 Aligned_cols=120 Identities=21% Similarity=0.253 Sum_probs=70.0
Q ss_pred cHHHHHHHhhcCCCCeeEeccCchHHHhhhccccCHHHHhccceeeEEEec--cCCeEE-----EEeccH-----HHHHH
Q 012352 292 DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQ--SDGKLF-----GYNTDY-----VGAIS 359 (465)
Q Consensus 292 ~l~~~~~~l~~~~~~G~~vT~P~K~~v~~~~d~~~~~A~~~gavNtv~~~~--~~g~l~-----G~NTD~-----~G~~~ 359 (465)
+..+..+.+++.++... ...|...+++..+..+--.+....-+|.|-... ..| +. |.|+.. .|++-
T Consensus 35 ~~~~l~~~~~~~d~~~~-~~~~v~~~~l~~~~~Lk~I~~~g~Gvd~id~~~~~~~g-i~V~nap~~na~~vAE~~~~~~L 112 (324)
T COG0111 35 DEEELLEALADADALIV-SVTPVTEEVLAAAPNLKAIGRAGAGVDNIDLEAATKRG-ILVVNAPGGNAISVAELVLALLL 112 (324)
T ss_pred chHHHHhhcccCcEEEE-ecCCCCHHHHhhCCCceEEEEccccccccCHHHHhhcC-CEEEeCCCcchHHHHHHHHHHHH
Confidence 33445566667776666 666777777776654444444333444442110 011 22 344442 23333
Q ss_pred HHHhhhc------cCCCCCC--CcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 012352 360 AIEDGLR------GRLNVSG--GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT 413 (465)
Q Consensus 360 ~l~~~~~------~~~~~~~--~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~ 413 (465)
++.+.+. +.+.|.. -.+..+.||++-|+|.|.+|+.++..+..+|.+|..+++.
T Consensus 113 ~~~R~~~~~~~~~~~g~W~~~~~~g~el~gkTvGIiG~G~IG~~va~~l~afgm~v~~~d~~ 174 (324)
T COG0111 113 ALARRIPDADASQRRGEWDRKAFRGTELAGKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPY 174 (324)
T ss_pred HHhcCchhhHHHHHcCCccccccccccccCCEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 3222110 0011111 1245788999999999999999999999999999999993
No 381
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=95.96 E-value=0.02 Score=59.32 Aligned_cols=103 Identities=17% Similarity=0.086 Sum_probs=62.1
Q ss_pred EEEEeccHHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHH--HHHHHHHCCCeEEEEECCHH--------
Q 012352 347 LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKA--LAYGAKAKGARVVIANRTYD-------- 415 (465)
Q Consensus 347 l~G~NTD~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~a--i~~~L~~~G~~v~i~~R~~~-------- 415 (465)
.+-.|+--.|..+..++.+.-... .....-.+|++||+|++ |+|.| ++.+| ..|++++++.+..+
T Consensus 10 ~i~~~~hp~gc~~~v~~qi~~~~~---~~~~~~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~t 85 (398)
T PRK13656 10 FICTTAHPVGCEANVKEQIEYVKA---QGPIANGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGT 85 (398)
T ss_pred eeECCCCCHHHHHHHHHHHHHHHh---cCCcCCCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccc
Confidence 555667778877776554320000 00112346899999996 89998 89999 99998877774321
Q ss_pred -------HHHHHHHHHCCcc----cch----------hcccccCCCCeeEEEecCCCCCC
Q 012352 416 -------RARELAETVGGHA----LSL----------ADLENFNPEDGMILANTTSIGMQ 454 (465)
Q Consensus 416 -------~a~~la~~~~~~~----~~~----------~~l~~~~~~~~DilInaT~~gm~ 454 (465)
..++++++.+... .+. +.+.+ ..++.|+|||+.+.+..
T Consensus 86 agwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~lie~I~e-~~G~IDiLVnSaA~~~r 144 (398)
T PRK13656 86 AGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQKVIELIKQ-DLGQVDLVVYSLASPRR 144 (398)
T ss_pred cccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-hcCCCCEEEECCccCCC
Confidence 1233444444321 122 11222 45789999999988743
No 382
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.96 E-value=0.024 Score=48.07 Aligned_cols=66 Identities=29% Similarity=0.311 Sum_probs=48.5
Q ss_pred EEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-----cchhcccccCCCCeeEEEecCC
Q 012352 384 FVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-----LSLADLENFNPEDGMILANTTS 450 (465)
Q Consensus 384 vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-----~~~~~l~~~~~~~~DilInaT~ 450 (465)
++|+|.|..|+.++..|.+.+.+|+++.+++++.+.+.++. ... .+.+.+.+..+.+++.+|-+|+
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~-~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEG-VEVIYGDATDPEVLERAGIEKADAVVILTD 71 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT-SEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcc-cccccccchhhhHHhhcCccccCEEEEccC
Confidence 68999999999999999996669999999999988887654 221 1222233334567888888775
No 383
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.0045 Score=58.83 Aligned_cols=37 Identities=27% Similarity=0.329 Sum_probs=33.1
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHH
Q 012352 380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR 416 (465)
Q Consensus 380 ~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~ 416 (465)
.+|+++|+|+ |++|++++..|++.|++|+++.|+.++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~ 39 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID 39 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 3688999998 599999999999999999999998764
No 384
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.93 E-value=0.027 Score=53.49 Aligned_cols=75 Identities=36% Similarity=0.413 Sum_probs=48.5
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHHC---Cc--c--cchhc---cccc------CCC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVG---GH--A--LSLAD---LENF------NPE 440 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R-~~~~a~~la~~~~---~~--~--~~~~~---l~~~------~~~ 440 (465)
+..|++||+|+ |++|++++..|.+.|++|++..| +.+..+.+.+.+. .. . .++.+ +.+. ...
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 83 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence 34689999998 69999999999999998776544 4545455544432 11 1 12211 1110 235
Q ss_pred CeeEEEecCCCCC
Q 012352 441 DGMILANTTSIGM 453 (465)
Q Consensus 441 ~~DilInaT~~gm 453 (465)
+.|++||+++...
T Consensus 84 ~id~vi~~ag~~~ 96 (249)
T PRK12825 84 RIDILVNNAGIFE 96 (249)
T ss_pred CCCEEEECCccCC
Confidence 6899999998543
No 385
>PRK06436 glycerate dehydrogenase; Provisional
Probab=95.93 E-value=0.01 Score=59.87 Aligned_cols=38 Identities=34% Similarity=0.496 Sum_probs=35.0
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY 414 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~ 414 (465)
..+.+|++.|+|.|.+|++++..|+.+|++|+.++|+.
T Consensus 118 ~~L~gktvgIiG~G~IG~~vA~~l~afG~~V~~~~r~~ 155 (303)
T PRK06436 118 KLLYNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSY 155 (303)
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 45789999999999999999999999999999999974
No 386
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=95.92 E-value=0.015 Score=57.68 Aligned_cols=45 Identities=24% Similarity=0.404 Sum_probs=38.1
Q ss_pred cEEEEEccchhHHHHHHHHHHCC----CeEEEEECCH-HHHHHHHHHHCC
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKG----ARVVIANRTY-DRARELAETVGG 426 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G----~~v~i~~R~~-~~a~~la~~~~~ 426 (465)
.++.+||+|.+|.+++..|.+.| .+|++++|+. ++++.+++.++.
T Consensus 4 mkI~~IG~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~ 53 (279)
T PRK07679 4 QNISFLGAGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGV 53 (279)
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCc
Confidence 47999999999999999999987 5899999976 467888776653
No 387
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=95.92 E-value=0.017 Score=62.23 Aligned_cols=40 Identities=20% Similarity=0.181 Sum_probs=36.5
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELA 421 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la 421 (465)
++|.|||+|-+|.+++..|+..|++|++++|++++.+.+.
T Consensus 5 ~kIavIG~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~ 44 (495)
T PRK07531 5 MKAACIGGGVIGGGWAARFLLAGIDVAVFDPHPEAERIIG 44 (495)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 4799999999999999999999999999999999877653
No 388
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=95.91 E-value=0.016 Score=57.08 Aligned_cols=46 Identities=28% Similarity=0.446 Sum_probs=41.8
Q ss_pred cEEEEEccchhHHHHHHHHHHCC----CeEEEEECCHHHHHHHHHHHCCc
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKG----ARVVIANRTYDRARELAETVGGH 427 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G----~~v~i~~R~~~~a~~la~~~~~~ 427 (465)
.++.++|+|.||.+++..|.+.| .+|++++|+.++.+.++++++..
T Consensus 2 ~~IgfIG~G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~~l~~~~g~~ 51 (266)
T COG0345 2 MKIGFIGAGNMGEAILSGLLKSGALPPEEIIVTNRSEEKRAALAAEYGVV 51 (266)
T ss_pred ceEEEEccCHHHHHHHHHHHhcCCCCcceEEEeCCCHHHHHHHHHHcCCc
Confidence 46899999999999999999999 38999999999999999999754
No 389
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=95.90 E-value=0.014 Score=58.34 Aligned_cols=70 Identities=20% Similarity=0.206 Sum_probs=46.9
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH---C--Cc--cc--chhc---ccccCCCCeeEEEe
Q 012352 381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV---G--GH--AL--SLAD---LENFNPEDGMILAN 447 (465)
Q Consensus 381 ~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~---~--~~--~~--~~~~---l~~~~~~~~DilIn 447 (465)
+|++||+|+ |.+|+.++..|.+.|++|+++.|+..+........ + .. .+ ++.+ +.. .+.++|+||+
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~d~Vih 82 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDS-VVDGCEGVFH 82 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHH-HHcCCCEEEE
Confidence 689999996 89999999999999999999888765433222111 1 01 11 2211 222 2456899999
Q ss_pred cCCC
Q 012352 448 TTSI 451 (465)
Q Consensus 448 aT~~ 451 (465)
+++.
T Consensus 83 ~A~~ 86 (322)
T PLN02662 83 TASP 86 (322)
T ss_pred eCCc
Confidence 9865
No 390
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=95.90 E-value=0.023 Score=56.66 Aligned_cols=67 Identities=16% Similarity=0.186 Sum_probs=48.1
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc------c---chhcccccCCCCeeEEEecCCCC
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA------L---SLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~------~---~~~~l~~~~~~~~DilInaT~~g 452 (465)
++.|+|+|.+|..++..|++.|.+|+++.|+.++.+.+.+. +... . ...+..+ ...+|+||-|++..
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~--~~~~d~vila~k~~ 77 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGHDVTLVARRGAHLDALNEN-GLRLEDGEITVPVLAADDPAE--LGPQDLVILAVKAY 77 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHc-CCcccCCceeecccCCCChhH--cCCCCEEEEecccc
Confidence 58999999999999999999999999999988877776542 2110 0 0111211 25688888888743
No 391
>PRK06487 glycerate dehydrogenase; Provisional
Probab=95.88 E-value=0.0091 Score=60.60 Aligned_cols=37 Identities=38% Similarity=0.476 Sum_probs=34.4
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT 413 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~ 413 (465)
..+.+|++.|+|.|.+|++++..+..+|++|..++|.
T Consensus 144 ~~l~gktvgIiG~G~IG~~vA~~l~~fgm~V~~~~~~ 180 (317)
T PRK06487 144 VELEGKTLGLLGHGELGGAVARLAEAFGMRVLIGQLP 180 (317)
T ss_pred cccCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCC
Confidence 3578999999999999999999999999999999986
No 392
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=95.84 E-value=0.022 Score=57.83 Aligned_cols=69 Identities=32% Similarity=0.456 Sum_probs=53.0
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-cccchhcccccCCCCeeEEEecCCC
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HALSLADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~~~~~~~l~~~~~~~~DilInaT~~ 451 (465)
.-+.||.|+|.|-|-.||.++..+...|++|.|+.-++-+|-+.+ ..+ .+.++++. ....|++|.||+-
T Consensus 205 ~liaGK~vVV~GYG~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~--MdGf~V~~m~~A----a~~gDifiT~TGn 274 (420)
T COG0499 205 VLLAGKNVVVAGYGWVGRGIAMRLRGMGARVIVTEVDPIRALEAA--MDGFRVMTMEEA----AKTGDIFVTATGN 274 (420)
T ss_pred eeecCceEEEecccccchHHHHHhhcCCCeEEEEecCchHHHHHh--hcCcEEEEhHHh----hhcCCEEEEccCC
Confidence 457899999999999999999999999999999999988775543 222 33344333 3356888888874
No 393
>cd00452 KDPG_aldolase KDPG and KHG aldolase. This family belongs to the class I adolases whose reaction mechanism involves Schiff base formation between a substrate carbonyl and lysine residue in the active site. 2-keto-3-deoxy-6-phosphogluconate (KDPG) aldolase, is best known for its role in the Entner-Doudoroff pathway of bacteria, where it catalyzes the reversible cleavage of KDPG to pyruvate and glyceraldehyde-3-phosphate. 2-keto-4-hydroxyglutarate (KHG) aldolase, which has enzymatic specificity toward glyoxylate, forming KHG in the presence of pyruvate, and is capable of regulating glyoxylate levels in the glyoxylate bypass, an alternate pathway when bacteria are grown on acetate carbon sources.
Probab=95.84 E-value=0.17 Score=47.30 Aligned_cols=118 Identities=21% Similarity=0.273 Sum_probs=68.7
Q ss_pred EEEeeccCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCCchhHHHHHHhhCCCcEEEEeccCCCCCCCCCCHHHHHHHHH
Q 012352 26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLR 105 (465)
Q Consensus 26 icv~l~~~t~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~~l~ 105 (465)
++..+...+.+++...++.+...|++++|+|...-. ..+.++.+.+..+. +.+. +|.. ...++ +.
T Consensus 6 ~~~i~r~~~~~~~~~~~~~l~~~G~~~vev~~~~~~---~~~~i~~l~~~~~~-~~iG------ag~v--~~~~~---~~ 70 (190)
T cd00452 6 LVAVLRGDDAEDALALAEALIEGGIRAIEITLRTPG---ALEAIRALRKEFPE-ALIG------AGTV--LTPEQ---AD 70 (190)
T ss_pred EEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCChh---HHHHHHHHHHHCCC-CEEE------EEeC--CCHHH---HH
Confidence 445588999999999999999999999999976322 23355555554431 2222 1221 21222 34
Q ss_pred HHHHhCCcEEEEeeccccchhHHHHhcCCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEE
Q 012352 106 LAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKF 172 (465)
Q Consensus 106 ~~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~~iI~S~H~f~~tps~~el~~~~~~~~~~gadivKi 172 (465)
.++..|++++=.- ....++.+. .+..+.++|.-.. +.+| ..++.+.|||++|+
T Consensus 71 ~a~~~Ga~~i~~p-~~~~~~~~~---~~~~~~~~i~gv~------t~~e----~~~A~~~Gad~i~~ 123 (190)
T cd00452 71 AAIAAGAQFIVSP-GLDPEVVKA---ANRAGIPLLPGVA------TPTE----IMQALELGADIVKL 123 (190)
T ss_pred HHHHcCCCEEEcC-CCCHHHHHH---HHHcCCcEECCcC------CHHH----HHHHHHCCCCEEEE
Confidence 5667788887321 112222222 2234566666433 2233 44455789999998
No 394
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=95.83 E-value=0.0094 Score=57.33 Aligned_cols=63 Identities=27% Similarity=0.421 Sum_probs=45.9
Q ss_pred chhHHHHHHHHHHCCCeEEEEECCHHH----HHHHHHHHCCccc--ch---hcc-------cccCC-CCeeEEEecCCCC
Q 012352 390 GGAGKALAYGAKAKGARVVIANRTYDR----ARELAETVGGHAL--SL---ADL-------ENFNP-EDGMILANTTSIG 452 (465)
Q Consensus 390 Gg~g~ai~~~L~~~G~~v~i~~R~~~~----a~~la~~~~~~~~--~~---~~l-------~~~~~-~~~DilInaT~~g 452 (465)
+|+|++++.+|++.|++|++.+|+.++ .+++.++++...+ ++ +++ .+ .. +..|++||+++..
T Consensus 6 ~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~~g~iD~lV~~a~~~ 84 (241)
T PF13561_consen 6 SGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVE-RFGGRIDILVNNAGIS 84 (241)
T ss_dssp SHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHH-HHCSSESEEEEEEESC
T ss_pred CChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHh-hcCCCeEEEEeccccc
Confidence 599999999999999999999999998 4455555554322 22 111 12 34 7899999998765
Q ss_pred C
Q 012352 453 M 453 (465)
Q Consensus 453 m 453 (465)
.
T Consensus 85 ~ 85 (241)
T PF13561_consen 85 P 85 (241)
T ss_dssp T
T ss_pred c
Confidence 4
No 395
>PRK06123 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.023 Score=54.49 Aligned_cols=72 Identities=28% Similarity=0.358 Sum_probs=48.7
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEE-CCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCCCe
Q 012352 381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETVG---GHA----LSLAD---LENF------NPEDG 442 (465)
Q Consensus 381 ~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~-R~~~~a~~la~~~~---~~~----~~~~~---l~~~------~~~~~ 442 (465)
+|.+||+|+ |++|++++..|++.|++|++.. |++++.+++.+.+. ... .++.+ +.+. ..+..
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 468999998 5899999999999999877775 56666666655442 211 12211 1110 23578
Q ss_pred eEEEecCCCC
Q 012352 443 MILANTTSIG 452 (465)
Q Consensus 443 DilInaT~~g 452 (465)
|+|||+++..
T Consensus 82 d~li~~ag~~ 91 (248)
T PRK06123 82 DALVNNAGIL 91 (248)
T ss_pred CEEEECCCCC
Confidence 9999999764
No 396
>PLN02650 dihydroflavonol-4-reductase
Probab=95.80 E-value=0.015 Score=59.41 Aligned_cols=71 Identities=17% Similarity=0.162 Sum_probs=49.8
Q ss_pred CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC--C---c--c--cchhc---ccccCCCCeeEEE
Q 012352 380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG--G---H--A--LSLAD---LENFNPEDGMILA 446 (465)
Q Consensus 380 ~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~--~---~--~--~~~~~---l~~~~~~~~DilI 446 (465)
++|++||+|+ |.+|+.++..|.+.|.+|+++.|+.++...+..... . . . .++.+ +.+ .+.++|.||
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~-~~~~~d~Vi 82 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDD-AIRGCTGVF 82 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHH-HHhCCCEEE
Confidence 4679999998 789999999999999999999998766655543321 1 1 1 12221 222 345689999
Q ss_pred ecCCC
Q 012352 447 NTTSI 451 (465)
Q Consensus 447 naT~~ 451 (465)
++++.
T Consensus 83 H~A~~ 87 (351)
T PLN02650 83 HVATP 87 (351)
T ss_pred EeCCC
Confidence 99864
No 397
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=95.79 E-value=0.024 Score=56.27 Aligned_cols=69 Identities=19% Similarity=0.256 Sum_probs=53.4
Q ss_pred CCcEEEEEccchhHHHHHHHHHHC--CCeEE-EEECCHHHHHHHHHHHCC-cc-cchhcccccCCCCeeEEEecCCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAK--GARVV-IANRTYDRARELAETVGG-HA-LSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~--G~~v~-i~~R~~~~a~~la~~~~~-~~-~~~~~l~~~~~~~~DilInaT~~g 452 (465)
+..++-|+|.|.+|+..+..|... ++++. +++|+++++++++++++. .. .+++++ +...|+||.|||..
T Consensus 5 ~~irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~~~~eel----l~~~D~Vvi~tp~~ 78 (271)
T PRK13302 5 PELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPVVPLDQL----ATHADIVVEAAPAS 78 (271)
T ss_pred CeeEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCcccCCHHHH----hcCCCEEEECCCcH
Confidence 346899999999999999999863 66654 889999999999988863 22 244444 23579999999865
No 398
>PRK07680 late competence protein ComER; Validated
Probab=95.78 E-value=0.016 Score=57.34 Aligned_cols=42 Identities=31% Similarity=0.381 Sum_probs=37.5
Q ss_pred EEEEEccchhHHHHHHHHHHCCC----eEEEEECCHHHHHHHHHHH
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGA----RVVIANRTYDRARELAETV 424 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~----~v~i~~R~~~~a~~la~~~ 424 (465)
++.|+|+|.+|.+++..|.+.|. +|++++|++++++.+++++
T Consensus 2 ~I~iIG~G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~ 47 (273)
T PRK07680 2 NIGFIGTGNMGTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERY 47 (273)
T ss_pred EEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHc
Confidence 48899999999999999998883 7999999999998888765
No 399
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=95.77 E-value=0.017 Score=57.74 Aligned_cols=68 Identities=21% Similarity=0.322 Sum_probs=44.6
Q ss_pred EEEEccc-hhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHC----Cccc---------chhc---ccccCCC--Cee
Q 012352 384 FVVIGAG-GAGKALAYGAKAKGA-RVVIANRTYDRARELAETVG----GHAL---------SLAD---LENFNPE--DGM 443 (465)
Q Consensus 384 vlV~GaG-g~g~ai~~~L~~~G~-~v~i~~R~~~~a~~la~~~~----~~~~---------~~~~---l~~~~~~--~~D 443 (465)
|||+|+| -+|+.++..|.+.+. +|++++|++.+...+..++. ...+ ++.+ +.. .+. +.|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~-~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNR-IFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHH-HTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHH-HHhhcCCC
Confidence 6899996 599999999999997 89999999999999888872 1101 2211 222 223 789
Q ss_pred EEEecCCCC
Q 012352 444 ILANTTSIG 452 (465)
Q Consensus 444 ilInaT~~g 452 (465)
+|++|+..=
T Consensus 80 iVfHaAA~K 88 (293)
T PF02719_consen 80 IVFHAAALK 88 (293)
T ss_dssp EEEE-----
T ss_pred EEEEChhcC
Confidence 999998764
No 400
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.74 E-value=0.012 Score=59.28 Aligned_cols=35 Identities=37% Similarity=0.437 Sum_probs=32.2
Q ss_pred CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHH
Q 012352 381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD 415 (465)
Q Consensus 381 ~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~ 415 (465)
+.++.|+|+|.+|.+++..|.+.|.+|++++|+..
T Consensus 4 ~m~I~iiG~G~~G~~lA~~l~~~G~~V~~~~r~~~ 38 (308)
T PRK14619 4 PKTIAILGAGAWGSTLAGLASANGHRVRVWSRRSG 38 (308)
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 46899999999999999999999999999999753
No 401
>PRK08605 D-lactate dehydrogenase; Validated
Probab=95.74 E-value=0.011 Score=60.30 Aligned_cols=40 Identities=28% Similarity=0.263 Sum_probs=34.9
Q ss_pred cccCCcEEEEEccchhHHHHHHHH-HHCCCeEEEEECCHHH
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDR 416 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L-~~~G~~v~i~~R~~~~ 416 (465)
..+.++++.|+|.|.+|++++..| ...|++|+.++|+..+
T Consensus 142 ~~l~g~~VgIIG~G~IG~~vA~~L~~~~g~~V~~~d~~~~~ 182 (332)
T PRK08605 142 RSIKDLKVAVIGTGRIGLAVAKIFAKGYGSDVVAYDPFPNA 182 (332)
T ss_pred ceeCCCEEEEECCCHHHHHHHHHHHhcCCCEEEEECCCccH
Confidence 468899999999999999999999 5578899999988654
No 402
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=95.74 E-value=0.02 Score=58.27 Aligned_cols=38 Identities=24% Similarity=0.304 Sum_probs=34.2
Q ss_pred cccCCcEEEEEccchhHHHHHHHHH-HCCCeEEEEECCH
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAK-AKGARVVIANRTY 414 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~-~~G~~v~i~~R~~ 414 (465)
..+.||++.|+|.|.+|++++..+. .+|++|..++|..
T Consensus 141 ~~L~gktvGIiG~G~IG~~va~~l~~~fgm~V~~~~~~~ 179 (323)
T PRK15409 141 TDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRH 179 (323)
T ss_pred CCCCCCEEEEEcccHHHHHHHHHHHhcCCCEEEEECCCC
Confidence 4578999999999999999999997 8899999998864
No 403
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=95.73 E-value=0.016 Score=56.78 Aligned_cols=64 Identities=17% Similarity=0.187 Sum_probs=47.3
Q ss_pred EEEEEccchhHHHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHC-Cccc-chhcccccCCCCeeEEEecCC
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGA---RVVIANRTYDRARELAETVG-GHAL-SLADLENFNPEDGMILANTTS 450 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~---~v~i~~R~~~~a~~la~~~~-~~~~-~~~~l~~~~~~~~DilInaT~ 450 (465)
++.|+|+|.+|++++..|.+.|. .+.+++|+.++++++++.++ .... +..++ ..++|+||-|++
T Consensus 2 ~IgiIG~G~mG~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~~~----~~~aDvVilav~ 70 (258)
T PRK06476 2 KIGFIGTGAITEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVRIAKDNQAV----VDRSDVVFLAVR 70 (258)
T ss_pred eEEEECcCHHHHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCceEeCCHHHH----HHhCCEEEEEeC
Confidence 58899999999999999998884 47899999999999988764 2221 22211 234677777766
No 404
>PLN00198 anthocyanidin reductase; Provisional
Probab=95.72 E-value=0.017 Score=58.60 Aligned_cols=73 Identities=19% Similarity=0.141 Sum_probs=48.5
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH--HHC----Ccc--cchhc---ccccCCCCeeEE
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAE--TVG----GHA--LSLAD---LENFNPEDGMIL 445 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~--~~~----~~~--~~~~~---l~~~~~~~~Dil 445 (465)
+.++++++|+|+ |.+|+.++..|.+.|++|+++.|+......+.. .+. ... .++.+ +.+ .+.++|+|
T Consensus 6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~d~v 84 (338)
T PLN00198 6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEA-PIAGCDLV 84 (338)
T ss_pred CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHH-HHhcCCEE
Confidence 355789999996 689999999999999999888887644333221 111 111 12222 222 34578999
Q ss_pred EecCCC
Q 012352 446 ANTTSI 451 (465)
Q Consensus 446 InaT~~ 451 (465)
||+++.
T Consensus 85 ih~A~~ 90 (338)
T PLN00198 85 FHVATP 90 (338)
T ss_pred EEeCCC
Confidence 999874
No 405
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.70 E-value=0.04 Score=50.27 Aligned_cols=55 Identities=33% Similarity=0.371 Sum_probs=39.0
Q ss_pred HHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHH
Q 012352 355 VGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRAREL 420 (465)
Q Consensus 355 ~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~l 420 (465)
.|++..|+.. +.+++||+|+|+|.+ -.|+-++..|.+.|+.|+++.......++.
T Consensus 21 ~aii~lL~~~-----------~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~ 76 (160)
T PF02882_consen 21 LAIIELLEYY-----------GIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEI 76 (160)
T ss_dssp HHHHHHHHHT-----------T-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHH
T ss_pred HHHHHHHHhc-----------CCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccce
Confidence 5666666652 257899999999998 599999999999999999998765444333
No 406
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=95.70 E-value=0.018 Score=59.74 Aligned_cols=38 Identities=18% Similarity=0.394 Sum_probs=35.2
Q ss_pred ccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 012352 376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT 413 (465)
Q Consensus 376 ~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~ 413 (465)
+..+.+|++.|+|.|.+|+.++..|..+|++|..+++.
T Consensus 111 g~~L~gktvGIIG~G~IG~~vA~~l~a~G~~V~~~dp~ 148 (378)
T PRK15438 111 GFSLHDRTVGIVGVGNVGRRLQARLEALGIKTLLCDPP 148 (378)
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCc
Confidence 36789999999999999999999999999999999874
No 407
>PLN02214 cinnamoyl-CoA reductase
Probab=95.69 E-value=0.021 Score=58.30 Aligned_cols=73 Identities=22% Similarity=0.120 Sum_probs=49.0
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHH-HHHHC---Cc--c--cchhc---ccccCCCCeeEEE
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRAREL-AETVG---GH--A--LSLAD---LENFNPEDGMILA 446 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~l-a~~~~---~~--~--~~~~~---l~~~~~~~~DilI 446 (465)
+++++++|+|+ |.+|+.++..|.+.|++|+.+.|+.++.... ...+. .. . .++.+ +.+ .+.++|+||
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~d~Vi 86 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKA-AIDGCDGVF 86 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHH-HHhcCCEEE
Confidence 56789999998 7999999999999999999999986643221 11221 11 1 12222 222 345689999
Q ss_pred ecCCCC
Q 012352 447 NTTSIG 452 (465)
Q Consensus 447 naT~~g 452 (465)
++++..
T Consensus 87 h~A~~~ 92 (342)
T PLN02214 87 HTASPV 92 (342)
T ss_pred EecCCC
Confidence 998653
No 408
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.69 E-value=0.03 Score=53.88 Aligned_cols=41 Identities=22% Similarity=0.183 Sum_probs=35.7
Q ss_pred CcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 012352 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY 414 (465)
Q Consensus 374 ~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~ 414 (465)
|.+..+++++|||+|+|.+|..=+..|.+.|++|+|++-+.
T Consensus 18 pi~l~~~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i 58 (223)
T PRK05562 18 FISLLSNKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKF 58 (223)
T ss_pred eeEEECCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 45667889999999999999888889999999999998764
No 409
>PRK06545 prephenate dehydrogenase; Validated
Probab=95.68 E-value=0.021 Score=58.87 Aligned_cols=69 Identities=23% Similarity=0.347 Sum_probs=46.7
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccc--hhcccccCCCCeeEEEecCCCC
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS--LADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~--~~~l~~~~~~~~DilInaT~~g 452 (465)
+++.|+|.|-+|.+++.+|.+.|.++.+++++..+... ....+....+ ..++.+ ...++|+||-|+|..
T Consensus 1 ~~I~iIG~GliG~siA~~L~~~G~~v~i~~~~~~~~~~-~~a~~~~~~~~~~~~~~~-~~~~aDlVilavP~~ 71 (359)
T PRK06545 1 RTVLIVGLGLIGGSLALAIKAAGPDVFIIGYDPSAAQL-ARALGFGVIDELAADLQR-AAAEADLIVLAVPVD 71 (359)
T ss_pred CeEEEEEeCHHHHHHHHHHHhcCCCeEEEEeCCCHHHH-HHHhcCCCCcccccCHHH-HhcCCCEEEEeCCHH
Confidence 46899999999999999999999988889888765333 2222221111 112222 345678888888764
No 410
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea. Catalysis of the enzymes proceeds via a Schiff-base mechanism like other class I aldolases, although this subfamily is clearly divergent based on sequence similarity to other class I and class II (metal dependent) aldolase subfamilies.
Probab=95.67 E-value=0.21 Score=48.20 Aligned_cols=156 Identities=17% Similarity=0.110 Sum_probs=85.2
Q ss_pred CHHHHHHHHHhhhhcCCCEEEEEecCCCCCCchhHHHHHHhhCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHhCCc
Q 012352 34 SVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGAD 113 (465)
Q Consensus 34 t~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~~l~~~~~~~~~ 113 (465)
+.++..+-++++.+.|+|.+=+..-+++.. .... ....|++..++...-=|.-..+.+......+.+++.|++
T Consensus 19 ~~~d~~~~~~~~~~~g~~av~v~~~~~~~~------~~~~-~~~~~~i~~~~~~~~i~~p~~~~~~~~~~v~~a~~~Ga~ 91 (235)
T cd00958 19 GLEDPEETVKLAAEGGADAVALTKGIARAY------GREY-AGDIPLIVKLNGSTSLSPKDDNDKVLVASVEDAVRLGAD 91 (235)
T ss_pred cccCHHHHHHHHHhcCCCEEEeChHHHHhc------cccc-CCCCcEEEEECCCCCCCCCCCCchhhhcCHHHHHHCCCC
Confidence 344444445555566888887653332211 0111 124577766663211111022335555567889999999
Q ss_pred EEEEeeccccc-------hhHHHHh-cCCCCcEEEEEeccCCC----CCCHHHHHHHHHHHHHcCCCEEEEEeecCCHHH
Q 012352 114 YIDVELQVARE-------FNDSIRG-KKPEKCKVIVSSHNYQY----TPSVEDLSNLVARIQASGADIVKFATTALDITD 181 (465)
Q Consensus 114 ~iDiEl~~~~~-------~~~~l~~-~~~~~~~iI~S~H~f~~----tps~~el~~~~~~~~~~gadivKia~~~~~~~D 181 (465)
.+|+.++.... ...++.. .+..+.++|+--|.... .-+.+++.+..+.+.+.|||++|+-. +. |
T Consensus 92 ~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~g~~~iie~~~~g~~~~~~~~~~~i~~~~~~a~~~GaD~Ik~~~-~~---~ 167 (235)
T cd00958 92 AVGVTVYVGSEEEREMLEELARVAAEAHKYGLPLIAWMYPRGPAVKNEKDPDLIAYAARIGAELGADIVKTKY-TG---D 167 (235)
T ss_pred EEEEEEecCCchHHHHHHHHHHHHHHHHHcCCCEEEEEeccCCcccCccCHHHHHHHHHHHHHHCCCEEEecC-CC---C
Confidence 99998865421 2223332 24568899996553110 01234555557778889999999942 23 3
Q ss_pred HHHHHHHhccCCCCEEEEe
Q 012352 182 VARVFQITVHSQVPIIGLV 200 (465)
Q Consensus 182 ~~~ll~~~~~~~~p~i~~~ 200 (465)
...+-++.+..+.|+++++
T Consensus 168 ~~~~~~i~~~~~~pvv~~G 186 (235)
T cd00958 168 AESFKEVVEGCPVPVVIAG 186 (235)
T ss_pred HHHHHHHHhcCCCCEEEeC
Confidence 3333444444567875553
No 411
>PRK12330 oxaloacetate decarboxylase; Provisional
Probab=95.66 E-value=1.8 Score=46.67 Aligned_cols=231 Identities=15% Similarity=0.114 Sum_probs=150.8
Q ss_pred ccccccCCCCCCcE-EEEeeccCCHHHHHHHHHhhhhcCCCEEEEE----ecC---CCCCCchhHHHHHHhhC-CCcEEE
Q 012352 12 SKLVSGGMRKNPTL-ICVPIMGESVDKMVVDMGKANASGADLVEIR----LDG---LKNFNPRENIKTLIKES-PVPTLF 82 (465)
Q Consensus 12 ~~~~~~~~~~~~~~-icv~l~~~t~~e~~~~~~~~~~~~~D~vElR----lD~---l~~~~~~~~l~~l~~~~-~~PiI~ 82 (465)
.+|..-++++.+-. +++.+ +.++++.-++.+-+.|.+.+|.= .|- |..-++.+.|+.+++.. +.|+-.
T Consensus 5 i~i~DTTLRDG~QSl~atr~---~t~d~l~ia~~ld~~G~~siE~~GGatfd~~~rfl~Edpwerlr~lr~~~~nt~lqm 81 (499)
T PRK12330 5 IGVTELALRDAHQSLMATRM---AMEDMVGACEDIDNAGYWSVECWGGATFDACIRFLNEDPWERLRTFRKLMPNSRLQM 81 (499)
T ss_pred cEEEECCccchhhcccCccC---CHHHHHHHHHHHHhcCCCEEEecCCcchhhhhcccCCCHHHHHHHHHHhCCCCeEEE
Confidence 45666677776655 33444 55566665666556799999996 562 22336677888887654 567777
Q ss_pred EeccCCCCCCCCCCHHHHHHHHHHHHHhCCcEEEEeecccc--chhHHHHhcCCC--CcEEEEEeccCCCCCCHHHHHHH
Q 012352 83 TYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAR--EFNDSIRGKKPE--KCKVIVSSHNYQYTPSVEDLSNL 158 (465)
Q Consensus 83 T~R~~~eGG~~~~~~~~~~~~l~~~~~~~~~~iDiEl~~~~--~~~~~l~~~~~~--~~~iI~S~H~f~~tps~~el~~~ 158 (465)
-+|..+==|..+..++-....++.+.+.|+|.+-|=....+ .....+...+.. ....-++|-.. .--+.+.+.+.
T Consensus 82 L~Rg~N~vGy~~y~ddvv~~fv~~a~~~Gidi~RIfd~lndv~nl~~ai~~vk~ag~~~~~~i~yt~s-p~~t~e~~~~~ 160 (499)
T PRK12330 82 LLRGQNLLGYRHYEDEVVDRFVEKSAENGMDVFRVFDALNDPRNLEHAMKAVKKVGKHAQGTICYTVS-PIHTVEGFVEQ 160 (499)
T ss_pred EEcccccCCccCcchhHHHHHHHHHHHcCCCEEEEEecCChHHHHHHHHHHHHHhCCeEEEEEEEecC-CCCCHHHHHHH
Confidence 79977777776777777778899999999999887433221 111112222222 23234444211 11146679999
Q ss_pred HHHHHHcCCCEEEEEeec--CCHHHHHHHHHHhccC---CCCEEEEe--cCccchhhhhhccccCCccccccccCccCCC
Q 012352 159 VARIQASGADIVKFATTA--LDITDVARVFQITVHS---QVPIIGLV--MGERGLISRILCAKFGGFLTFGTLENGIVSA 231 (465)
Q Consensus 159 ~~~~~~~gadivKia~~~--~~~~D~~~ll~~~~~~---~~p~i~~~--MG~~G~~sRi~~~~~Gs~~tf~~~~~~~~sA 231 (465)
.+++.+.|||.+=|+=|+ -+|.++.++...+... +.|+-..+ .-.++..+=+..-.-|....=+++.. .+-+
T Consensus 161 a~~l~~~Gad~I~IkDtaGll~P~~~~~LV~~Lk~~~~~~ipI~~H~Hnt~GlA~An~laAieAGad~vDtai~G-lg~~ 239 (499)
T PRK12330 161 AKRLLDMGADSICIKDMAALLKPQPAYDIVKGIKEACGEDTRINLHCHSTTGVTLVSLMKAIEAGVDVVDTAISS-MSLG 239 (499)
T ss_pred HHHHHHcCCCEEEeCCCccCCCHHHHHHHHHHHHHhCCCCCeEEEEeCCCCCcHHHHHHHHHHcCCCEEEeeccc-cccc
Confidence 999999999999888666 5789999999887643 46766544 33344555555666676666566664 3567
Q ss_pred CCCCChhhHHhhhccc
Q 012352 232 PGQPTIKDLLDLYNFR 247 (465)
Q Consensus 232 pGQ~~~~~l~~~~~~~ 247 (465)
+||++.+++-..++-.
T Consensus 240 aGn~atE~vv~~L~~~ 255 (499)
T PRK12330 240 PGHNPTESLVEMLEGT 255 (499)
T ss_pred ccchhHHHHHHHHHhc
Confidence 8999999988877743
No 412
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=95.65 E-value=0.023 Score=56.55 Aligned_cols=72 Identities=19% Similarity=0.136 Sum_probs=50.4
Q ss_pred CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-HHCCcccchhcc-cccCCCCeeEEEecCCCCC
Q 012352 381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE-TVGGHALSLADL-ENFNPEDGMILANTTSIGM 453 (465)
Q Consensus 381 ~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~-~~~~~~~~~~~l-~~~~~~~~DilInaT~~gm 453 (465)
.++|+|+|.|.+|++++..|.+.|..+.|++++...+..... +++.......+. .. ...++|+||-|+|+..
T Consensus 3 ~~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~-~~~~aD~VivavPi~~ 76 (279)
T COG0287 3 SMKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAE-AAAEADLVIVAVPIEA 76 (279)
T ss_pred CcEEEEECCchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccchhhh-hcccCCEEEEeccHHH
Confidence 368999999999999999999999999888888766544433 343211000111 12 3456899999999863
No 413
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=95.64 E-value=0.057 Score=51.47 Aligned_cols=70 Identities=30% Similarity=0.365 Sum_probs=47.6
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHH-HHHHHHHHHC---Cc--c--cchhc---c-------cccCCCCe
Q 012352 382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-RARELAETVG---GH--A--LSLAD---L-------ENFNPEDG 442 (465)
Q Consensus 382 k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~-~a~~la~~~~---~~--~--~~~~~---l-------~~~~~~~~ 442 (465)
|+++|+|+ |++|++++..|.+.|++|++..|+.. .++++...+. .. . .++.+ + .+ ..+..
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~~~i 81 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEE-EEGPV 81 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHH-HcCCC
Confidence 68999987 59999999999999999999999843 3444444332 11 1 12211 1 11 24568
Q ss_pred eEEEecCCCC
Q 012352 443 MILANTTSIG 452 (465)
Q Consensus 443 DilInaT~~g 452 (465)
|++||+++..
T Consensus 82 d~vi~~ag~~ 91 (245)
T PRK12824 82 DILVNNAGIT 91 (245)
T ss_pred CEEEECCCCC
Confidence 9999999865
No 414
>PLN02686 cinnamoyl-CoA reductase
Probab=95.61 E-value=0.024 Score=58.54 Aligned_cols=45 Identities=24% Similarity=0.230 Sum_probs=38.6
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELA 421 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la 421 (465)
...++|+|||+|+ |.+|++++..|.+.|++|+++.|+.++.+.+.
T Consensus 49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR 94 (367)
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 3467899999998 79999999999999999999899887766653
No 415
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=95.61 E-value=0.034 Score=58.79 Aligned_cols=69 Identities=23% Similarity=0.339 Sum_probs=52.1
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-----chhcccccCCCCeeEEEecCCC
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-----SLADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~-----~~~~l~~~~~~~~DilInaT~~ 451 (465)
+++|+|+|.+|+.++..|.+.|.+|++++|++++.+.+.+..+...+ +...+.+..+.++|.+|.+++-
T Consensus 2 ~viIiG~G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~ 75 (453)
T PRK09496 2 KIIIVGAGQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDS 75 (453)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCC
Confidence 68999999999999999999999999999999998888764432221 1122333235678888888764
No 416
>PLN02256 arogenate dehydrogenase
Probab=95.59 E-value=0.03 Score=56.45 Aligned_cols=69 Identities=23% Similarity=0.256 Sum_probs=47.8
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
++.++.|+|.|.+|.+++..|.+.|.+|++++|+.. .+.+..++... +.+..+....++|+||-|+|..
T Consensus 35 ~~~kI~IIG~G~mG~slA~~L~~~G~~V~~~d~~~~--~~~a~~~gv~~--~~~~~e~~~~~aDvVilavp~~ 103 (304)
T PLN02256 35 RKLKIGIVGFGNFGQFLAKTFVKQGHTVLATSRSDY--SDIAAELGVSF--FRDPDDFCEEHPDVVLLCTSIL 103 (304)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECccH--HHHHHHcCCee--eCCHHHHhhCCCCEEEEecCHH
Confidence 467899999999999999999999999999999864 34455554321 2222221112468888888754
No 417
>PLN02688 pyrroline-5-carboxylate reductase
Probab=95.56 E-value=0.022 Score=55.86 Aligned_cols=40 Identities=30% Similarity=0.372 Sum_probs=35.4
Q ss_pred EEEEEccchhHHHHHHHHHHCCC----eEEEE-ECCHHHHHHHHH
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGA----RVVIA-NRTYDRARELAE 422 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~----~v~i~-~R~~~~a~~la~ 422 (465)
++.++|.|.+|.+++..|.+.|+ +|+++ +|++++++.+.+
T Consensus 2 kI~~IG~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~ 46 (266)
T PLN02688 2 RVGFIGAGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQS 46 (266)
T ss_pred eEEEECCcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHH
Confidence 47899999999999999999987 89999 999998877653
No 418
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=95.55 E-value=0.046 Score=54.31 Aligned_cols=44 Identities=27% Similarity=0.431 Sum_probs=40.7
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET 423 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~ 423 (465)
..+++=.||-|-+|.+++..|...|++|+||||+.++.+.+.+.
T Consensus 34 s~~~iGFIGLG~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~ 77 (327)
T KOG0409|consen 34 SKTRIGFIGLGNMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEA 77 (327)
T ss_pred ccceeeEEeeccchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHh
Confidence 46789999999999999999999999999999999999988764
No 419
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=95.53 E-value=0.026 Score=48.03 Aligned_cols=68 Identities=24% Similarity=0.229 Sum_probs=52.4
Q ss_pred EEEEEccchhHHHHHHHHHHCC--Ce-EEEEECCHHHHHHHHHHHCCcc-cchhcccccCCCCeeEEEecCCCC
Q 012352 383 LFVVIGAGGAGKALAYGAKAKG--AR-VVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G--~~-v~i~~R~~~~a~~la~~~~~~~-~~~~~l~~~~~~~~DilInaT~~g 452 (465)
++.|+|+|.+|+.-...+.+.. .+ +.++++++++++.++++++... .+++++-+ ..+.|+++-+||..
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~~~~~~~~ll~--~~~~D~V~I~tp~~ 73 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIPVYTDLEELLA--DEDVDAVIIATPPS 73 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSEEESSHHHHHH--HTTESEEEEESSGG
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhcccchhHHHHHHH--hhcCCEEEEecCCc
Confidence 5899999999999988888773 45 4589999999999999887653 24444432 13689999999875
No 420
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=95.50 E-value=0.033 Score=59.50 Aligned_cols=40 Identities=30% Similarity=0.374 Sum_probs=37.7
Q ss_pred EEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 012352 384 FVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET 423 (465)
Q Consensus 384 vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~ 423 (465)
+-|+|.|-||.+++..|++.|++|+++||++++.+++.+.
T Consensus 2 IG~IGLG~MG~~mA~nL~~~G~~V~v~drt~~~~~~l~~~ 41 (467)
T TIGR00873 2 IGVIGLAVMGSNLALNMADHGFTVSVYNRTPEKTDEFLAE 41 (467)
T ss_pred EEEEeeHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhh
Confidence 6789999999999999999999999999999999998876
No 421
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=95.49 E-value=0.085 Score=50.61 Aligned_cols=93 Identities=17% Similarity=0.175 Sum_probs=58.1
Q ss_pred HHHHHHHHHhhhccCCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCH----------HHHHHHHH
Q 012352 354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY----------DRARELAE 422 (465)
Q Consensus 354 ~~G~~~~l~~~~~~~~~~~~~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~~----------~~a~~la~ 422 (465)
+.|...+++..+... +.++++++++|.|.|..|+.++..|.+.|+ .|.|.+.+. +..+...+
T Consensus 3 g~Gv~~~~~~~~~~~-------~~~l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~ 75 (217)
T cd05211 3 GYGVVVAMKAAMKHL-------GDSLEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVA 75 (217)
T ss_pred hhHHHHHHHHHHHHc-------CCCcCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHh
Confidence 466666665544321 256889999999999999999999999998 677777766 44433332
Q ss_pred HHCCcccch-hcc--cccCCCCeeEEEecCCCCC
Q 012352 423 TVGGHALSL-ADL--ENFNPEDGMILANTTSIGM 453 (465)
Q Consensus 423 ~~~~~~~~~-~~l--~~~~~~~~DilInaT~~gm 453 (465)
..+....+- +.+ .++...++|++|=|+.-+.
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~~DVlipaA~~~~ 109 (217)
T cd05211 76 LGGSARVKVQDYFPGEAILGLDVDIFAPCALGNV 109 (217)
T ss_pred hCCccccCcccccCcccceeccccEEeeccccCc
Confidence 221111110 111 1111136899999887553
No 422
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=95.47 E-value=0.028 Score=61.04 Aligned_cols=70 Identities=26% Similarity=0.296 Sum_probs=48.0
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCCC
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
..+.+|++.|+|.|.+|+.++..|..+|++|+.++|+.... .+..++....+ +.+ .+.++|+|+.+.|..
T Consensus 136 ~~l~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~--~~~~~g~~~~~---l~e-ll~~aDiV~l~lP~t 205 (526)
T PRK13581 136 VELYGKTLGIIGLGRIGSEVAKRAKAFGMKVIAYDPYISPE--RAAQLGVELVS---LDE-LLARADFITLHTPLT 205 (526)
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCChh--HHHhcCCEEEc---HHH-HHhhCCEEEEccCCC
Confidence 45789999999999999999999999999999999854321 11222322222 222 234567777776654
No 423
>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively.
Probab=95.46 E-value=0.43 Score=47.71 Aligned_cols=84 Identities=26% Similarity=0.370 Sum_probs=57.9
Q ss_pred EEEEeeccCCHHHHHHHHHhhhhcCCCEEEEEec----------CCCCCCc-hhHHHHHHhhCCCcEEEEeccCCCCCCC
Q 012352 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLD----------GLKNFNP-RENIKTLIKESPVPTLFTYRPIWEGGQY 93 (465)
Q Consensus 25 ~icv~l~~~t~~e~~~~~~~~~~~~~D~vElRlD----------~l~~~~~-~~~l~~l~~~~~~PiI~T~R~~~eGG~~ 93 (465)
.+.+.|.+.+.++...-++.+...|+|.||+=+- +..+.+. .+.++.+++..+.|+.+-++..
T Consensus 91 p~ivsi~g~~~~~~~~~a~~~~~~G~d~iElN~~cP~~~~~g~~~~~~~~~~~eiv~~vr~~~~~Pv~vKl~~~------ 164 (296)
T cd04740 91 PVIASIAGSTVEEFVEVAEKLADAGADAIELNISCPNVKGGGMAFGTDPEAVAEIVKAVKKATDVPVIVKLTPN------ 164 (296)
T ss_pred cEEEEEecCCHHHHHHHHHHHHHcCCCEEEEECCCCCCCCCcccccCCHHHHHHHHHHHHhccCCCEEEEeCCC------
Confidence 3668999999999999888887889999999543 2221110 1234445444588998887631
Q ss_pred CCCHHHHHHHHHHHHHhCCcEEEE
Q 012352 94 DGDENERVDVLRLAMELGADYIDV 117 (465)
Q Consensus 94 ~~~~~~~~~~l~~~~~~~~~~iDi 117 (465)
.++-.++.+.+.+.|+|+|++
T Consensus 165 ---~~~~~~~a~~~~~~G~d~i~~ 185 (296)
T cd04740 165 ---VTDIVEIARAAEEAGADGLTL 185 (296)
T ss_pred ---chhHHHHHHHHHHcCCCEEEE
Confidence 224556777788889999887
No 424
>PRK06932 glycerate dehydrogenase; Provisional
Probab=95.46 E-value=0.023 Score=57.60 Aligned_cols=38 Identities=26% Similarity=0.357 Sum_probs=34.6
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY 414 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~ 414 (465)
..+.||++.|+|.|.+|++++..++.+|++|+.++|..
T Consensus 143 ~~l~gktvgIiG~G~IG~~va~~l~~fg~~V~~~~~~~ 180 (314)
T PRK06932 143 TDVRGSTLGVFGKGCLGTEVGRLAQALGMKVLYAEHKG 180 (314)
T ss_pred cccCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCc
Confidence 35789999999999999999999999999999998863
No 425
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.45 E-value=0.035 Score=55.71 Aligned_cols=73 Identities=29% Similarity=0.363 Sum_probs=54.6
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcccc-------hhcc----ccc-CCCCeeEEE
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALS-------LADL----ENF-NPEDGMILA 446 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~~~-------~~~l----~~~-~~~~~DilI 446 (465)
.+.+|||+|||.+|..+...++..|+ +|++++-.+.|. ++|+++|...+. .+++ ... .-..+|+.|
T Consensus 169 ~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rl-e~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~ 247 (354)
T KOG0024|consen 169 KGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRL-ELAKKFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTF 247 (354)
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHH-HHHHHhCCeEEeeccccccHHHHHHHHHhhccccCCCeEE
Confidence 46799999999999999999999999 999999988874 566779865321 1121 110 113489999
Q ss_pred ecCCCCC
Q 012352 447 NTTSIGM 453 (465)
Q Consensus 447 naT~~gm 453 (465)
+|+++.+
T Consensus 248 dCsG~~~ 254 (354)
T KOG0024|consen 248 DCSGAEV 254 (354)
T ss_pred EccCchH
Confidence 9998764
No 426
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=95.44 E-value=0.023 Score=59.00 Aligned_cols=38 Identities=26% Similarity=0.406 Sum_probs=35.1
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY 414 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~ 414 (465)
..+.+|++.|+|.|.+|+.++..|..+|++|.++++..
T Consensus 112 ~~l~gktvGIIG~G~IG~~va~~l~a~G~~V~~~Dp~~ 149 (381)
T PRK00257 112 VDLAERTYGVVGAGHVGGRLVRVLRGLGWKVLVCDPPR 149 (381)
T ss_pred CCcCcCEEEEECCCHHHHHHHHHHHHCCCEEEEECCcc
Confidence 57889999999999999999999999999999998753
No 427
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=95.44 E-value=0.023 Score=57.74 Aligned_cols=46 Identities=30% Similarity=0.348 Sum_probs=38.7
Q ss_pred ccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Q 012352 376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELA 421 (465)
Q Consensus 376 ~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la 421 (465)
+..+.+|+|.|+|.|.+|+++++.|..+|+.+.-.+|+..+.+...
T Consensus 157 g~~~~gK~vgilG~G~IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~~ 202 (336)
T KOG0069|consen 157 GYDLEGKTVGILGLGRIGKAIAKRLKPFGCVILYHSRTQLPPEEAY 202 (336)
T ss_pred cccccCCEEEEecCcHHHHHHHHhhhhccceeeeecccCCchhhHH
Confidence 4567899999999999999999999999977888888776655443
No 428
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=95.44 E-value=0.054 Score=57.24 Aligned_cols=73 Identities=25% Similarity=0.231 Sum_probs=55.8
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-cc-----cchhcccccCCCCeeEEEecCCC
Q 012352 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA-----LSLADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 379 l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~~-----~~~~~l~~~~~~~~DilInaT~~ 451 (465)
...++++|+|.|..|+.++..|.+.|.+|+++++++++.+.+.+++.. .. .+.+.+.+..+.++|.+|.+++-
T Consensus 229 ~~~~~iiIiG~G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~~ 307 (453)
T PRK09496 229 KPVKRVMIVGGGNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTND 307 (453)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCCC
Confidence 456899999999999999999999999999999999998888776522 11 12222333346678999888763
No 429
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=95.44 E-value=0.041 Score=55.99 Aligned_cols=74 Identities=18% Similarity=0.268 Sum_probs=51.7
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHC------C-c-ccc-hhcccccCCCCeeEEEecC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVG------G-H-ALS-LADLENFNPEDGMILANTT 449 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~~~~a~~la~~~~------~-~-~~~-~~~l~~~~~~~~DilInaT 449 (465)
+.+++.|+|+|.+|.++++.++..|. +|+++++++++++.-+-++. . . .+. ..+. + .+.++|+||+++
T Consensus 5 ~~~KI~IIGaG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~-~-~l~~aDiVI~ta 82 (321)
T PTZ00082 5 KRRKISLIGSGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY-E-DIAGSDVVIVTA 82 (321)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH-H-HhCCCCEEEECC
Confidence 45789999999999999999999996 99999999886543221111 0 1 011 1222 2 357899999999
Q ss_pred CCCCCC
Q 012352 450 SIGMQP 455 (465)
Q Consensus 450 ~~gm~~ 455 (465)
+.+-.+
T Consensus 83 g~~~~~ 88 (321)
T PTZ00082 83 GLTKRP 88 (321)
T ss_pred CCCCCC
Confidence 886544
No 430
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=95.43 E-value=0.034 Score=54.93 Aligned_cols=67 Identities=18% Similarity=0.296 Sum_probs=50.5
Q ss_pred EEEEEccchhHHHHHHHHHHCC--Ce-EEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCCC
Q 012352 383 LFVVIGAGGAGKALAYGAKAKG--AR-VVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G--~~-v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
++.|+|.|.+|+.++..+.+.+ ++ +.+++|+.++++.+++.++... +.++++ .+.++|+||.|||..
T Consensus 3 rIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~~--~~~~~e-ll~~~DvVvi~a~~~ 72 (265)
T PRK13304 3 KIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAKA--CLSIDE-LVEDVDLVVECASVN 72 (265)
T ss_pred EEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCee--ECCHHH-HhcCCCEEEEcCChH
Confidence 6899999999999999998764 54 7789999999999988765432 223333 125689999998754
No 431
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.42 E-value=0.024 Score=57.05 Aligned_cols=67 Identities=24% Similarity=0.310 Sum_probs=48.1
Q ss_pred EEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc--chh---cccccCCCCeeEEEecCCC
Q 012352 383 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL--SLA---DLENFNPEDGMILANTTSI 451 (465)
Q Consensus 383 ~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~--~~~---~l~~~~~~~~DilInaT~~ 451 (465)
+++|+|+ |-+|+.++.+|.+.|++|+++.|+.+++..+.. .+...+ ++. .+.+ .+.++|.||++++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~-~~v~~v~~Dl~d~~~l~~-al~g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKE-WGAELVYGDLSLPETLPP-SFKGVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhh-cCCEEEECCCCCHHHHHH-HHCCCCEEEECCCC
Confidence 6899997 789999999999999999999999876654432 222221 222 2333 45678999998753
No 432
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=95.40 E-value=0.0094 Score=60.47 Aligned_cols=38 Identities=24% Similarity=0.162 Sum_probs=33.4
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHH
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD 415 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~ 415 (465)
++++|+|||+|+ |++|++++..|.+.|++|+++.|+..
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~ 41 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS 41 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence 456899999997 78999999999999999999988653
No 433
>PLN02306 hydroxypyruvate reductase
Probab=95.35 E-value=0.027 Score=58.74 Aligned_cols=39 Identities=26% Similarity=0.228 Sum_probs=34.8
Q ss_pred cccCCcEEEEEccchhHHHHHHHHH-HCCCeEEEEECCHH
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAK-AKGARVVIANRTYD 415 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~-~~G~~v~i~~R~~~ 415 (465)
..+.+|++.|+|.|.+|++++..|. .+|++|..++|+..
T Consensus 161 ~~L~gktvGIiG~G~IG~~vA~~l~~~fGm~V~~~d~~~~ 200 (386)
T PLN02306 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQS 200 (386)
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhcCCCEEEEECCCCc
Confidence 4578999999999999999999985 88999999998753
No 434
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.
Probab=95.33 E-value=0.95 Score=42.29 Aligned_cols=130 Identities=17% Similarity=0.131 Sum_probs=78.9
Q ss_pred cEEEEeeccCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCCchhHHHHHHhh-CCCcEEEEeccCCCCCCCCCCHHHHHH
Q 012352 24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-SPVPTLFTYRPIWEGGQYDGDENERVD 102 (465)
Q Consensus 24 ~~icv~l~~~t~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~-~~~PiI~T~R~~~eGG~~~~~~~~~~~ 102 (465)
+.||+.|-..+.++..+-++.+... +|++|+-..+..... .+.++.+++. .+.|++...-.. +.+ . .
T Consensus 1 ~~~~~a~d~~~~~~~~~~~~~l~~~-i~~ieig~~~~~~~g-~~~i~~i~~~~~~~~i~~~~~v~-~~~-------~--~ 68 (202)
T cd04726 1 PLLQVALDLLDLEEALELAKKVPDG-VDIIEAGTPLIKSEG-MEAVRALREAFPDKIIVADLKTA-DAG-------A--L 68 (202)
T ss_pred CceEEEEcCCCHHHHHHHHHHhhhc-CCEEEcCCHHHHHhC-HHHHHHHHHHCCCCEEEEEEEec-ccc-------H--H
Confidence 5789999999999999988887665 999999666554322 2467777665 478887754322 111 1 2
Q ss_pred HHHHHHHhCCcEEEEeeccccchhHHHH-hcCCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEE
Q 012352 103 VLRLAMELGADYIDVELQVAREFNDSIR-GKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKF 172 (465)
Q Consensus 103 ~l~~~~~~~~~~iDiEl~~~~~~~~~l~-~~~~~~~~iI~S~H~f~~tps~~el~~~~~~~~~~gadivKi 172 (465)
.++.+.+.|++++=+-.....+..+++. ..+..+.++++..+... | ..+.. + +...|+|++|+
T Consensus 69 ~~~~~~~aGad~i~~h~~~~~~~~~~~i~~~~~~g~~~~v~~~~~~-t--~~e~~---~-~~~~~~d~v~~ 132 (202)
T cd04726 69 EAEMAFKAGADIVTVLGAAPLSTIKKAVKAAKKYGKEVQVDLIGVE-D--PEKRA---K-LLKLGVDIVIL 132 (202)
T ss_pred HHHHHHhcCCCEEEEEeeCCHHHHHHHHHHHHHcCCeEEEEEeCCC-C--HHHHH---H-HHHCCCCEEEE
Confidence 3466778899988764433221112222 22335777776544321 2 22332 2 55568898888
No 435
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=95.30 E-value=0.045 Score=56.25 Aligned_cols=71 Identities=23% Similarity=0.297 Sum_probs=52.2
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cch---hcccccCCCCeeEEEecCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSL---ADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~---~~l~~~~~~~~DilInaT~~ 451 (465)
.+++|+|.|+|++|.+++..++..|++|+++.++.++...++++++... ++. +++.+ ..+.+|++|++++.
T Consensus 183 ~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~-~~~~~D~vid~~g~ 257 (360)
T PLN02586 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKA-AIGTMDYIIDTVSA 257 (360)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHh-hcCCCCEEEECCCC
Confidence 4789999999999999999999999998888777776667777777532 221 12222 22358999999874
No 436
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.29 E-value=0.053 Score=54.75 Aligned_cols=71 Identities=18% Similarity=0.283 Sum_probs=51.6
Q ss_pred EEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCc-cc------chhcccccCCCCeeEEEecCCCCC
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH-AL------SLADLENFNPEDGMILANTTSIGM 453 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~-~~------~~~~l~~~~~~~~DilInaT~~gm 453 (465)
++.|+|+|.+|.++++.|+..|. +|++++|+.++++..+..+... .. ...+. + .+.++|++|.|++...
T Consensus 2 kI~IIGaG~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~-~-~l~~aDiViita~~~~ 79 (308)
T cd05292 2 KVAIVGAGFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDY-A-DCKGADVVVITAGANQ 79 (308)
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCH-H-HhCCCCEEEEccCCCC
Confidence 58999999999999999999994 8999999998887544444311 00 00111 2 3567999999999875
Q ss_pred CC
Q 012352 454 QP 455 (465)
Q Consensus 454 ~~ 455 (465)
.+
T Consensus 80 ~~ 81 (308)
T cd05292 80 KP 81 (308)
T ss_pred CC
Confidence 43
No 437
>cd00945 Aldolase_Class_I Class I aldolases. The class I aldolases use an active-site lysine which stablilzes a reaction intermediates via Schiff base formation, and have TIM beta/alpha barrel fold. The members of this family include 2-keto-3-deoxy-6-phosphogluconate (KDPG) and 2-keto-4-hydroxyglutarate (KHG) aldolases, transaldolase, dihydrodipicolinate synthase sub-family, Type I 3-dehydroquinate dehydratase, DeoC and DhnA proteins, and metal-independent fructose-1,6-bisphosphate aldolase. Although structurally similar, the class II aldolases use a different mechanism and are believed to have an independent evolutionary origin.
Probab=95.29 E-value=1.9 Score=39.59 Aligned_cols=152 Identities=16% Similarity=0.131 Sum_probs=91.5
Q ss_pred CHHHHHHHHHhhhhcCCCEEEEEecCCCCCCchhHHHHHHhhC---CCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHh
Q 012352 34 SVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKES---PVPTLFTYRPIWEGGQYDGDENERVDVLRLAMEL 110 (465)
Q Consensus 34 t~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~---~~PiI~T~R~~~eGG~~~~~~~~~~~~l~~~~~~ 110 (465)
+.+.+.+.++.+...|+|.+++-- +.++.+.+.. +.|+++.+-.... . ...++-.+..+.+.+.
T Consensus 11 d~~~~~~~~~~~~~~gv~gi~~~g---------~~i~~~~~~~~~~~~~v~~~v~~~~~--~--~~~~~~~~~a~~a~~~ 77 (201)
T cd00945 11 TLEDIAKLCDEAIEYGFAAVCVNP---------GYVRLAADALAGSDVPVIVVVGFPTG--L--TTTEVKVAEVEEAIDL 77 (201)
T ss_pred CHHHHHHHHHHHHHhCCcEEEECH---------HHHHHHHHHhCCCCCeEEEEecCCCC--C--CcHHHHHHHHHHHHHc
Confidence 677777777777788999999875 2344443332 4788876543211 1 2246677888999999
Q ss_pred CCcEEEEeeccc-------c---chhHHHHhcCCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEeecC---
Q 012352 111 GADYIDVELQVA-------R---EFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTAL--- 177 (465)
Q Consensus 111 ~~~~iDiEl~~~-------~---~~~~~l~~~~~~~~~iI~S~H~f~~tps~~el~~~~~~~~~~gadivKia~~~~--- 177 (465)
|+|.+.+-.... + ++.+.+...-..+..+++- +....+.+.+++.+..+.+...|+|.+|......
T Consensus 78 Gad~i~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~pv~iy-~~p~~~~~~~~~~~~~~~~~~~g~~~iK~~~~~~~~~ 156 (201)
T cd00945 78 GADEIDVVINIGSLKEGDWEEVLEEIAAVVEAADGGLPLKVI-LETRGLKTADEIAKAARIAAEAGADFIKTSTGFGGGG 156 (201)
T ss_pred CCCEEEEeccHHHHhCCCHHHHHHHHHHHHHHhcCCceEEEE-EECCCCCCHHHHHHHHHHHHHhCCCEEEeCCCCCCCC
Confidence 999999865432 1 2333443221135555553 3323333556777777777789999999876422
Q ss_pred -CHHHHHHHHHHhccCCCCEEEEe
Q 012352 178 -DITDVARVFQITVHSQVPIIGLV 200 (465)
Q Consensus 178 -~~~D~~~ll~~~~~~~~p~i~~~ 200 (465)
+.+.+..+.+... .+.|+++.+
T Consensus 157 ~~~~~~~~i~~~~~-~~~~v~~~g 179 (201)
T cd00945 157 ATVEDVKLMKEAVG-GRVGVKAAG 179 (201)
T ss_pred CCHHHHHHHHHhcc-cCCcEEEEC
Confidence 5666655554432 134555543
No 438
>PRK06924 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.031 Score=53.77 Aligned_cols=43 Identities=30% Similarity=0.463 Sum_probs=35.8
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHH
Q 012352 382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETV 424 (465)
Q Consensus 382 k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~-~~a~~la~~~ 424 (465)
|+++|+|+ ||+|++++..|++.|++|++++|+. ++.+++.+..
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~ 46 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQY 46 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhcc
Confidence 57999997 6999999999999999999999987 5555555444
No 439
>PRK07578 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.028 Score=52.26 Aligned_cols=62 Identities=19% Similarity=0.196 Sum_probs=42.3
Q ss_pred EEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccc---hhcccccCCCCeeEEEecCCCCC
Q 012352 383 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS---LADLENFNPEDGMILANTTSIGM 453 (465)
Q Consensus 383 ~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~---~~~l~~~~~~~~DilInaT~~gm 453 (465)
+++|+|+ ||+|++++..|++. ++|++++|+.+. +.....+ ++++-+ ..++.|+|||+++.+.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~-------~~~D~~~~~~~~~~~~-~~~~id~lv~~ag~~~ 67 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSGD-------VQVDITDPASIRALFE-KVGKVDAVVSAAGKVH 67 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCc-------eEecCCChHHHHHHHH-hcCCCCEEEECCCCCC
Confidence 6899998 59999999999988 999999997541 1000001 111112 3457899999998653
No 440
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=95.28 E-value=0.047 Score=58.39 Aligned_cols=41 Identities=27% Similarity=0.495 Sum_probs=38.3
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET 423 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~ 423 (465)
++.|+|.|-+|.+++..|++.|++|+++||++++.+++.+.
T Consensus 3 ~IgvIGLG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~ 43 (470)
T PTZ00142 3 DIGLIGLAVMGQNLALNIASRGFKISVYNRTYEKTEEFVKK 43 (470)
T ss_pred EEEEEeEhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHh
Confidence 58899999999999999999999999999999999888764
No 441
>PRK08328 hypothetical protein; Provisional
Probab=95.28 E-value=0.017 Score=55.92 Aligned_cols=36 Identities=31% Similarity=0.554 Sum_probs=32.5
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCH
Q 012352 379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY 414 (465)
Q Consensus 379 l~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~~ 414 (465)
+.+++|+|+|+||.|..++..|+..|+ ++++++.+.
T Consensus 25 L~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~ 61 (231)
T PRK08328 25 LKKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQT 61 (231)
T ss_pred HhCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 567899999999999999999999999 999998553
No 442
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea. Catalysis of the enzymes proceeds via a Schiff-base mechanism like other class I aldolases, although this subfamily is clearly divergent based on sequence similarity to other class I and class II (metal dependent) aldolase subfamilies.
Probab=95.26 E-value=0.59 Score=45.01 Aligned_cols=138 Identities=18% Similarity=0.201 Sum_probs=86.1
Q ss_pred EEeec--cCCHHHHHHHHHhhhhcCCCEE--EEEecCCCCCCchhHHHHHH---hhCCCcEEEEeccCCCCCCCC--CCH
Q 012352 27 CVPIM--GESVDKMVVDMGKANASGADLV--EIRLDGLKNFNPRENIKTLI---KESPVPTLFTYRPIWEGGQYD--GDE 97 (465)
Q Consensus 27 cv~l~--~~t~~e~~~~~~~~~~~~~D~v--ElRlD~l~~~~~~~~l~~l~---~~~~~PiI~T~R~~~eGG~~~--~~~ 97 (465)
|+++. ..+.+....+++++...|+|.+ .+|...+......+.++.++ +...+|+|+.... +|.... .+.
T Consensus 65 ~~~i~~p~~~~~~~~~~v~~a~~~Ga~~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~g~~~iie~~~--~g~~~~~~~~~ 142 (235)
T cd00958 65 STSLSPKDDNDKVLVASVEDAVRLGADAVGVTVYVGSEEEREMLEELARVAAEAHKYGLPLIAWMYP--RGPAVKNEKDP 142 (235)
T ss_pred CCCCCCCCCCchhhhcCHHHHHHCCCCEEEEEEecCCchHHHHHHHHHHHHHHHHHcCCCEEEEEec--cCCcccCccCH
Confidence 44454 4677778888888889999988 77766443211122344443 3468999987654 233221 233
Q ss_pred HHHHHHHHHHHHhCCcEEEEeeccccchhHHHHhcCCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEE
Q 012352 98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIV 170 (465)
Q Consensus 98 ~~~~~~l~~~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~~iI~S~H~f~~tps~~el~~~~~~~~~~gadiv 170 (465)
++..+..+.+.+.|+|||=+-.....+.++++... -..+++++=.. ...+.++..+.++++.+.|++-+
T Consensus 143 ~~i~~~~~~a~~~GaD~Ik~~~~~~~~~~~~i~~~--~~~pvv~~GG~--~~~~~~~~l~~~~~~~~~Ga~gv 211 (235)
T cd00958 143 DLIAYAARIGAELGADIVKTKYTGDAESFKEVVEG--CPVPVVIAGGP--KKDSEEEFLKMVYDAMEAGAAGV 211 (235)
T ss_pred HHHHHHHHHHHHHCCCEEEecCCCCHHHHHHHHhc--CCCCEEEeCCC--CCCCHHHHHHHHHHHHHcCCcEE
Confidence 33333466788899999999654434455555532 34567776321 23466778899999999999855
No 443
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=95.23 E-value=0.022 Score=56.84 Aligned_cols=37 Identities=24% Similarity=0.270 Sum_probs=34.0
Q ss_pred EEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Q 012352 386 VIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE 422 (465)
Q Consensus 386 V~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~ 422 (465)
++|.|-+|.+++..|.+.|.+|++|+|++++.+.+.+
T Consensus 1 ~IGlG~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~ 37 (288)
T TIGR01692 1 FIGLGNMGGPMAANLLKAGHPVRVFDLFPDAVEEAVA 37 (288)
T ss_pred CCcccHhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence 5799999999999999999999999999999888764
No 444
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=95.21 E-value=0.063 Score=52.99 Aligned_cols=71 Identities=31% Similarity=0.324 Sum_probs=51.0
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCe-EEEEECCHHHHHHHHHHHCCcc-cchhc----cccc-CCCCeeEEEecCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHA-LSLAD----LENF-NPEDGMILANTTSI 451 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~~-v~i~~R~~~~a~~la~~~~~~~-~~~~~----l~~~-~~~~~DilInaT~~ 451 (465)
.+++|+|+|+|++|..++..++..|++ |+++++++++. +++++++... ++..+ +.+. ....+|++|++++.
T Consensus 120 ~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~-~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~ 197 (280)
T TIGR03366 120 KGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRR-ELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGA 197 (280)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCC
Confidence 578999999999999999999999994 88888888775 5677777532 22211 1111 12358999999863
No 445
>PRK12331 oxaloacetate decarboxylase; Provisional
Probab=95.19 E-value=4.9 Score=42.84 Aligned_cols=231 Identities=13% Similarity=0.155 Sum_probs=147.1
Q ss_pred ccccccCCCCCCcEE-EEeeccCCHHHHHHHHHhhhhcCCCEEEEE----ecC---CCCCCchhHHHHHHhhC-CCcEEE
Q 012352 12 SKLVSGGMRKNPTLI-CVPIMGESVDKMVVDMGKANASGADLVEIR----LDG---LKNFNPRENIKTLIKES-PVPTLF 82 (465)
Q Consensus 12 ~~~~~~~~~~~~~~i-cv~l~~~t~~e~~~~~~~~~~~~~D~vElR----lD~---l~~~~~~~~l~~l~~~~-~~PiI~ 82 (465)
.+|..-++++..-.. .+.+.- ++.+.-++.+...|.+.+|.- .|. |-..++.+.++.+++.. +.++..
T Consensus 4 V~I~DtTlRDG~Qs~~~~~~~t---~dkl~ia~~Ld~~Gv~~IE~~ggatf~~~~~f~~e~p~e~l~~l~~~~~~~~l~~ 80 (448)
T PRK12331 4 IKITETVLRDGQQSLIATRMTT---EEMLPILEKLDNAGYHSLEMWGGATFDACLRFLNEDPWERLRKIRKAVKKTKLQM 80 (448)
T ss_pred cEEEECCCCccccCcCCcccCH---HHHHHHHHHHHHcCCCEEEecCCccchhhhccCCCCHHHHHHHHHHhCCCCEEEE
Confidence 355566677666554 444444 444444445556699999994 442 22335666787776553 455555
Q ss_pred EeccCCCCCCCCCCHHHHHHHHHHHHHhCCcEEEEeecccc--chhHHHHhcCCCCcEE--EEEeccCCCCCCHHHHHHH
Q 012352 83 TYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAR--EFNDSIRGKKPEKCKV--IVSSHNYQYTPSVEDLSNL 158 (465)
Q Consensus 83 T~R~~~eGG~~~~~~~~~~~~l~~~~~~~~~~iDiEl~~~~--~~~~~l~~~~~~~~~i--I~S~H~f~~tps~~el~~~ 158 (465)
-+|..+--|..+..++-..+.++.+++.|++.|-|=....+ ...+.+..++..+..+ -+||-+ ..--+.+.+.+.
T Consensus 81 l~r~~N~~G~~~~pddvv~~~v~~A~~~Gvd~irif~~lnd~~n~~~~v~~ak~~G~~v~~~i~~t~-~p~~~~~~~~~~ 159 (448)
T PRK12331 81 LLRGQNLLGYRNYADDVVESFVQKSVENGIDIIRIFDALNDVRNLETAVKATKKAGGHAQVAISYTT-SPVHTIDYFVKL 159 (448)
T ss_pred EeccccccccccCchhhHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHHHHHcCCeEEEEEEeec-CCCCCHHHHHHH
Confidence 58877777776667777778889999999999888654322 1112222233334443 345443 211256778999
Q ss_pred HHHHHHcCCCEEEEEeec--CCHHHHHHHHHHhcc-CCCCEEEEe--cCccchhhhhhccccCCccccccccCccCCCCC
Q 012352 159 VARIQASGADIVKFATTA--LDITDVARVFQITVH-SQVPIIGLV--MGERGLISRILCAKFGGFLTFGTLENGIVSAPG 233 (465)
Q Consensus 159 ~~~~~~~gadivKia~~~--~~~~D~~~ll~~~~~-~~~p~i~~~--MG~~G~~sRi~~~~~Gs~~tf~~~~~~~~sApG 233 (465)
.+++.+.|+|.+=|+=|. -+|.++.++...+.. .+.|+-..+ .-.+|..+=+..-..|....=+++.. .+...|
T Consensus 160 a~~l~~~Gad~I~i~Dt~G~l~P~~v~~lv~alk~~~~~pi~~H~Hnt~GlA~AN~laAieaGad~vD~sv~g-lg~gaG 238 (448)
T PRK12331 160 AKEMQEMGADSICIKDMAGILTPYVAYELVKRIKEAVTVPLEVHTHATSGIAEMTYLKAIEAGADIIDTAISP-FAGGTS 238 (448)
T ss_pred HHHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHhcCCeEEEEecCCCCcHHHHHHHHHHcCCCEEEeeccc-cCCCcC
Confidence 999999999998888665 478999999888654 356665433 44455566666666676666566653 234478
Q ss_pred CCChhhHHhhhccc
Q 012352 234 QPTIKDLLDLYNFR 247 (465)
Q Consensus 234 Q~~~~~l~~~~~~~ 247 (465)
|++.+++-..++-.
T Consensus 239 N~~tE~lv~~L~~~ 252 (448)
T PRK12331 239 QPATESMVAALQDL 252 (448)
T ss_pred CHhHHHHHHHHHhc
Confidence 99999988777643
No 446
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.13 E-value=0.05 Score=54.36 Aligned_cols=39 Identities=26% Similarity=0.281 Sum_probs=36.0
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHH
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL 420 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~l 420 (465)
++|.|+|+|-+|+.++..|+..|++|++++++++..+..
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~ 44 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGVDVLVFETTEELATAG 44 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence 479999999999999999999999999999999987763
No 447
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.12 E-value=0.04 Score=50.52 Aligned_cols=75 Identities=24% Similarity=0.346 Sum_probs=57.9
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc----ch---hccc------ccCCCCeeE
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL----SL---ADLE------NFNPEDGMI 444 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~----~~---~~l~------~~~~~~~Di 444 (465)
.++-.++|+|. .|.|++.+..|+..|+.+.+.+--..+..+.+++++.+.+ ++ +++. ....+..|.
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 45667788854 6999999999999999999999988999999999987531 21 1211 114678999
Q ss_pred EEecCCCCC
Q 012352 445 LANTTSIGM 453 (465)
Q Consensus 445 lInaT~~gm 453 (465)
+|||+++..
T Consensus 87 ~vncagia~ 95 (260)
T KOG1199|consen 87 LVNCAGIAY 95 (260)
T ss_pred eeeccceee
Confidence 999998764
No 448
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.10 E-value=0.044 Score=54.78 Aligned_cols=73 Identities=19% Similarity=0.197 Sum_probs=55.5
Q ss_pred cEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc--c----------cchhcccc------cCCCCe
Q 012352 382 KLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH--A----------LSLADLEN------FNPEDG 442 (465)
Q Consensus 382 k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~--~----------~~~~~l~~------~~~~~~ 442 (465)
++++|+|.. |+|++++..++.+|++|+++.|+.++..+++.+++.. . .+++.++. ......
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 689999775 9999999999999999999999999999998887631 1 12222211 023568
Q ss_pred eEEEecCCCCCC
Q 012352 443 MILANTTSIGMQ 454 (465)
Q Consensus 443 DilInaT~~gm~ 454 (465)
|.+|||++....
T Consensus 114 d~l~~cAG~~v~ 125 (331)
T KOG1210|consen 114 DNLFCCAGVAVP 125 (331)
T ss_pred ceEEEecCcccc
Confidence 999999987643
No 449
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=95.09 E-value=0.074 Score=54.67 Aligned_cols=70 Identities=23% Similarity=0.273 Sum_probs=49.7
Q ss_pred cEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcccch--h-c----cccc-CCCCeeEEEecCCC
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSL--A-D----LENF-NPEDGMILANTTSI 451 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~~~~--~-~----l~~~-~~~~~DilInaT~~ 451 (465)
.+|+|+|+|.+|..++..+...|+ +|++++++++|.+...+..+...+.. + + ..+. ....+|++|.|++.
T Consensus 170 ~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~G~ 248 (350)
T COG1063 170 GTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVGS 248 (350)
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHhCCCCCCEEEECCCC
Confidence 389999999999999988999998 89999999999655444355432211 1 1 1111 12369999999984
No 450
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=95.05 E-value=0.043 Score=59.60 Aligned_cols=71 Identities=30% Similarity=0.343 Sum_probs=47.8
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCCC
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
..+.+|++.|+|.|.+|++++..|..+|++|+.++|.... +.+.+++.... +++.+ .+.++|+|+.+.|..
T Consensus 134 ~~l~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~--~~~~~~g~~~~--~~l~e-ll~~aDvV~l~lPlt 204 (525)
T TIGR01327 134 TELYGKTLGVIGLGRIGSIVAKRAKAFGMKVLAYDPYISP--ERAEQLGVELV--DDLDE-LLARADFITVHTPLT 204 (525)
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCh--hHHHhcCCEEc--CCHHH-HHhhCCEEEEccCCC
Confidence 4578999999999999999999999999999999985321 11223332211 12222 234567777766643
No 451
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=95.05 E-value=0.046 Score=54.98 Aligned_cols=69 Identities=25% Similarity=0.347 Sum_probs=51.9
Q ss_pred EEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcc-------cc-hhcccccCCCCeeEEEecCCCCC
Q 012352 384 FVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA-------LS-LADLENFNPEDGMILANTTSIGM 453 (465)
Q Consensus 384 vlV~GaGg~g~ai~~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~-------~~-~~~l~~~~~~~~DilInaT~~gm 453 (465)
+.|+|+|++|.++++.|+..|. ++++++++.++++..+.++.... +. ..+ .+ .+.++|++|.+++..-
T Consensus 1 i~iiGaG~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~-~l~~aDiVIitag~p~ 78 (300)
T cd00300 1 ITIIGAGNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD-YA-DAADADIVVITAGAPR 78 (300)
T ss_pred CEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC-HH-HhCCCCEEEEcCCCCC
Confidence 4699999999999999999994 79999999999888877664211 10 011 12 4567999999998754
Q ss_pred C
Q 012352 454 Q 454 (465)
Q Consensus 454 ~ 454 (465)
.
T Consensus 79 ~ 79 (300)
T cd00300 79 K 79 (300)
T ss_pred C
Confidence 3
No 452
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.04 E-value=0.046 Score=55.45 Aligned_cols=41 Identities=22% Similarity=0.303 Sum_probs=37.1
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET 423 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~ 423 (465)
++.|+|+|.+|.+++..|++.|.+|++++|+++..+.+.+.
T Consensus 2 kI~IiGaGa~G~ala~~L~~~g~~V~l~~r~~~~~~~i~~~ 42 (326)
T PRK14620 2 KISILGAGSFGTAIAIALSSKKISVNLWGRNHTTFESINTK 42 (326)
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHc
Confidence 48899999999999999999999999999999888777653
No 453
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.02 E-value=0.061 Score=54.46 Aligned_cols=71 Identities=20% Similarity=0.256 Sum_probs=52.2
Q ss_pred cEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcc-------cch-hcccccCCCCeeEEEecCCC
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA-------LSL-ADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~-------~~~-~~l~~~~~~~~DilInaT~~ 451 (465)
.+|.|+|+|.+|.++++.|+..|. ++.+++++.++++..+.++.... +.. .+. + .+.++|+||.+++.
T Consensus 4 ~Ki~IiGaG~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy-~-~~~~adivvitaG~ 81 (312)
T cd05293 4 NKVTVVGVGQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDY-S-VTANSKVVIVTAGA 81 (312)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCH-H-HhCCCCEEEECCCC
Confidence 489999999999999999998885 79999998888777666553210 110 111 2 35679999999887
Q ss_pred CCC
Q 012352 452 GMQ 454 (465)
Q Consensus 452 gm~ 454 (465)
.-.
T Consensus 82 ~~k 84 (312)
T cd05293 82 RQN 84 (312)
T ss_pred CCC
Confidence 543
No 454
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=95.00 E-value=0.08 Score=53.92 Aligned_cols=67 Identities=12% Similarity=0.089 Sum_probs=46.9
Q ss_pred CCcEEEEEccchhHHHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS 450 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~-~G~-~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~ 450 (465)
.+.+|+|+|+|++|..++..++. .|. +|++++++++|.+.+ ++.+.. ...+++.+ . ..+|++|++++
T Consensus 163 ~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a-~~~~~~-~~~~~~~~-~-~g~d~viD~~G 231 (341)
T cd08237 163 DRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLF-SFADET-YLIDDIPE-D-LAVDHAFECVG 231 (341)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHH-hhcCce-eehhhhhh-c-cCCcEEEECCC
Confidence 36799999999999998887775 565 899999998886554 333321 11222222 1 24899999998
No 455
>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase. at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase.
Probab=94.99 E-value=0.56 Score=44.11 Aligned_cols=130 Identities=19% Similarity=0.157 Sum_probs=83.4
Q ss_pred EEEEeeccCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCCchhHHHHHHhhC-CCcEEEEeccCCCCCCCCCCHHHHHHH
Q 012352 25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKES-PVPTLFTYRPIWEGGQYDGDENERVDV 103 (465)
Q Consensus 25 ~icv~l~~~t~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~~~~~~~ 103 (465)
++||.+-..+.++.+.-++.+ ..+.|++|+-.-++.... .+.++.+++.. +.++++..... +-| .+ .
T Consensus 1 ~l~~alD~~~~~~a~~~~~~l-~~~v~~iev~~~l~~~~g-~~~i~~l~~~~~~~~i~~d~k~~-d~~-------~~--~ 68 (206)
T TIGR03128 1 KLQLALDLLDIEEALELAEKV-ADYVDIIEIGTPLIKNEG-IEAVKEMKEAFPDRKVLADLKTM-DAG-------EY--E 68 (206)
T ss_pred CeEEEecCCCHHHHHHHHHHc-ccCeeEEEeCCHHHHHhC-HHHHHHHHHHCCCCEEEEEEeec-cch-------HH--H
Confidence 478999999999999988877 778999999644444332 24677776654 45677665432 111 11 3
Q ss_pred HHHHHHhCCcEEEEeeccccchhHHHH-hcCCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEE
Q 012352 104 LRLAMELGADYIDVELQVAREFNDSIR-GKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKF 172 (465)
Q Consensus 104 l~~~~~~~~~~iDiEl~~~~~~~~~l~-~~~~~~~~iI~S~H~f~~tps~~el~~~~~~~~~~gadivKi 172 (465)
.+.+.+.|+|+|=+-.........++. ..+..+.++++..++.. +..+....+.++|+|++|+
T Consensus 69 ~~~~~~~Gad~i~vh~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~------t~~~~~~~~~~~g~d~v~~ 132 (206)
T TIGR03128 69 AEQAFAAGADIVTVLGVADDATIKGAVKAAKKHGKEVQVDLINVK------DKVKRAKELKELGADYIGV 132 (206)
T ss_pred HHHHHHcCCCEEEEeccCCHHHHHHHHHHHHHcCCEEEEEecCCC------ChHHHHHHHHHcCCCEEEE
Confidence 566778899998765554322222222 22346889998766531 2344455567789999988
No 456
>PRK07455 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=94.98 E-value=0.16 Score=47.63 Aligned_cols=118 Identities=21% Similarity=0.215 Sum_probs=65.7
Q ss_pred EEEeeccCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCCchhHHHHHHhhCCCcEEEEeccCCCCCCCCCCHHHHHHHHH
Q 012352 26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLR 105 (465)
Q Consensus 26 icv~l~~~t~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~~l~ 105 (465)
++..+...+.++....++.+...|+.++|+|..-... .+.++.+++.. |.+ .. .+|.. ... ++ ++
T Consensus 14 ~~~v~r~~~~~~~~~~~~~~~~~Gv~~vqlr~k~~~~---~e~~~~~~~~~--~~~-~~----g~gtv-l~~-d~---~~ 78 (187)
T PRK07455 14 AIAVIRAPDLELGLQMAEAVAAGGMRLIEITWNSDQP---AELISQLREKL--PEC-II----GTGTI-LTL-ED---LE 78 (187)
T ss_pred EEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCH---HHHHHHHHHhC--CCc-EE----eEEEE-EcH-HH---HH
Confidence 4445889999999999999999999999999765432 23344443322 321 01 11221 122 34 34
Q ss_pred HHHHhCCcEEEEeeccccchhHHHHhcCCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEE
Q 012352 106 LAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKF 172 (465)
Q Consensus 106 ~~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~~iI~S~H~f~~tps~~el~~~~~~~~~~gadivKi 172 (465)
.|++.|++++=+-- ...++.+ .... .+...|.-.| ||+ | +.++.+.|+|++|+
T Consensus 79 ~A~~~gAdgv~~p~-~~~~~~~-~~~~--~~~~~i~G~~----t~~--e----~~~A~~~Gadyv~~ 131 (187)
T PRK07455 79 EAIAAGAQFCFTPH-VDPELIE-AAVA--QDIPIIPGAL----TPT--E----IVTAWQAGASCVKV 131 (187)
T ss_pred HHHHcCCCEEECCC-CCHHHHH-HHHH--cCCCEEcCcC----CHH--H----HHHHHHCCCCEEEE
Confidence 56778899872211 1111221 1111 1223333355 332 3 45555689999998
No 457
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=94.98 E-value=0.054 Score=52.51 Aligned_cols=43 Identities=28% Similarity=0.518 Sum_probs=37.8
Q ss_pred EEEEEccc-hhHHHHHHHHHH----CCCeEEEEECCHHHHHHHHHHHC
Q 012352 383 LFVVIGAG-GAGKALAYGAKA----KGARVVIANRTYDRARELAETVG 425 (465)
Q Consensus 383 ~vlV~GaG-g~g~ai~~~L~~----~G~~v~i~~R~~~~a~~la~~~~ 425 (465)
.++|+|++ |+|++++..|++ .|++|++++|+.++++++++++.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~ 49 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIG 49 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHH
Confidence 58899985 999999999987 78999999999999988887763
No 458
>PLN02712 arogenate dehydrogenase
Probab=94.96 E-value=0.07 Score=59.55 Aligned_cols=71 Identities=23% Similarity=0.208 Sum_probs=48.3
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-chhcccccCCCCeeEEEecCCCC
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~-~~~~l~~~~~~~~DilInaT~~g 452 (465)
..+.++++.|||.|.+|++++.+|.+.|.+|++++|+... +.+.+++.... +.+++. ...+|+||-|+|..
T Consensus 365 ~~~~~~kIgIIGlG~mG~slA~~L~~~G~~V~~~dr~~~~--~~a~~~Gv~~~~~~~el~---~~~aDvVILavP~~ 436 (667)
T PLN02712 365 NDGSKLKIAIVGFGNFGQFLAKTMVKQGHTVLAYSRSDYS--DEAQKLGVSYFSDADDLC---EEHPEVILLCTSIL 436 (667)
T ss_pred CCCCCCEEEEEecCHHHHHHHHHHHHCcCEEEEEECChHH--HHHHHcCCeEeCCHHHHH---hcCCCEEEECCChH
Confidence 4467789999999999999999999999999999998643 22334443211 122211 12357777777654
No 459
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.95 E-value=0.058 Score=57.45 Aligned_cols=72 Identities=18% Similarity=0.198 Sum_probs=47.4
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHH-----HHHHHHHCCcccchhcccccCCCCeeEEEecCCCC
Q 012352 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRA-----RELAETVGGHALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 379 l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a-----~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
+.+|+|+|+|.|+.|++++..|.+.|++|++++++.... ..+ +..+.....-....+ .+.++|+||.+.++.
T Consensus 12 ~~~~~i~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~~~~~l-~~~gi~~~~~~~~~~-~~~~~dlVV~Spgi~ 88 (458)
T PRK01710 12 IKNKKVAVVGIGVSNIPLIKFLVKLGAKVTAFDKKSEEELGEVSNEL-KELGVKLVLGENYLD-KLDGFDVIFKTPSMR 88 (458)
T ss_pred hcCCeEEEEcccHHHHHHHHHHHHCCCEEEEECCCCCccchHHHHHH-HhCCCEEEeCCCChH-HhccCCEEEECCCCC
Confidence 457899999999999999999999999999999764211 122 122222111111112 245689999986554
No 460
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily. The DRE-TIM metallolyase superfamily includes 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".
Probab=94.88 E-value=3.9 Score=39.73 Aligned_cols=200 Identities=15% Similarity=0.147 Sum_probs=125.1
Q ss_pred CHHHHHHHHHhhhhcCCCEEEEEecCCC----C-CCchhHHHHHHhhC-CCcEEEEeccCCCCCCCCCCHHHHHHHHHHH
Q 012352 34 SVDKMVVDMGKANASGADLVEIRLDGLK----N-FNPRENIKTLIKES-PVPTLFTYRPIWEGGQYDGDENERVDVLRLA 107 (465)
Q Consensus 34 t~~e~~~~~~~~~~~~~D~vElRlD~l~----~-~~~~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~~~~~~~l~~~ 107 (465)
+.++.++-++.+.+.|+|.||+=.=--. - .++.+.++.+.+.. +.++.+-.|.. .+.++.+
T Consensus 17 s~e~~~~i~~~L~~~GV~~IEvg~~~~~~~~p~~~~~~~~i~~l~~~~~~~~~~~l~~~~-------------~~~i~~a 83 (265)
T cd03174 17 STEDKLEIAEALDEAGVDSIEVGSGASPKAVPQMEDDWEVLRAIRKLVPNVKLQALVRNR-------------EKGIERA 83 (265)
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccCcCccccccCCCHHHHHHHHHhccCCcEEEEEccCc-------------hhhHHHH
Confidence 5666677677777789999997432111 0 12334566665544 45665556641 3356677
Q ss_pred HHhCCcEEEEeeccc----------------cchhHHHHhcCCCCcEEEEEe-ccCCCCCCHHHHHHHHHHHHHcCCCEE
Q 012352 108 MELGADYIDVELQVA----------------REFNDSIRGKKPEKCKVIVSS-HNYQYTPSVEDLSNLVARIQASGADIV 170 (465)
Q Consensus 108 ~~~~~~~iDiEl~~~----------------~~~~~~l~~~~~~~~~iI~S~-H~f~~tps~~el~~~~~~~~~~gadiv 170 (465)
.+.|++.|-+=+... +...+.+...+..+..+.++. ..+.+.-+.+++.+.++++.++|+|.+
T Consensus 84 ~~~g~~~i~i~~~~s~~~~~~~~~~~~~~~~~~~~~~i~~a~~~G~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~i 163 (265)
T cd03174 84 LEAGVDEVRIFDSASETHSRKNLNKSREEDLENAEEAIEAAKEAGLEVEGSLEDAFGCKTDPEYVLEVAKALEEAGADEI 163 (265)
T ss_pred HhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEeecCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 788888888866544 112223333455688888888 445421256789999999999999998
Q ss_pred EEEeec--CCHHHHHHHHHHhccC-C-CCEEEEecCcc--chhhhhhccccCCccccccccCccCCCCCCCChhhHHhhh
Q 012352 171 KFATTA--LDITDVARVFQITVHS-Q-VPIIGLVMGER--GLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLY 244 (465)
Q Consensus 171 Kia~~~--~~~~D~~~ll~~~~~~-~-~p~i~~~MG~~--G~~sRi~~~~~Gs~~tf~~~~~~~~sApGQ~~~~~l~~~~ 244 (465)
-++=+. -+|+++.++++.+... + .|+-..+=-.. |...=+..-..|..+.=+++.+ ..-..|+.+++++...+
T Consensus 164 ~l~Dt~G~~~P~~v~~li~~l~~~~~~~~~~~H~Hn~~gla~an~laA~~aG~~~id~s~~G-~G~~~Gn~~~e~~~~~l 242 (265)
T cd03174 164 SLKDTVGLATPEEVAELVKALREALPDVPLGLHTHNTLGLAVANSLAALEAGADRVDGSVNG-LGERAGNAATEDLVAAL 242 (265)
T ss_pred EechhcCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCCChHHHHHHHHHHcCCCEEEecccc-ccccccCccHHHHHHHH
Confidence 887433 5789999998886543 2 55555443333 3344444445565555556654 23568999999887766
Q ss_pred ccc
Q 012352 245 NFR 247 (465)
Q Consensus 245 ~~~ 247 (465)
+..
T Consensus 243 ~~~ 245 (265)
T cd03174 243 EGL 245 (265)
T ss_pred Hhc
Confidence 643
No 461
>cd00959 DeoC 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family. DERA belongs to the class I aldolases and catalyzes a reversible aldol reaction between acetaldehyde and glyceraldehyde 3-phosphate to generate 2-deoxyribose 5-phosphate. DERA is unique in catalyzing the aldol reaction between two aldehydes, and its broad substrate specificity confers considerable utility as a biocatalyst, offering an environmentally benign alternative to chiral transition metal catalysis of the asymmetric aldol reaction.
Probab=94.85 E-value=1.8 Score=40.95 Aligned_cols=145 Identities=17% Similarity=0.126 Sum_probs=88.0
Q ss_pred cCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCCchhHHHHHHhhCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHhC
Q 012352 32 GESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELG 111 (465)
Q Consensus 32 ~~t~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~~l~~~~~~~ 111 (465)
..+.+++.+-++++.+.++|.+=+.--+++ ..+..+.. ....+-|.-....|. .+.+.+..-.+.|++.|
T Consensus 13 ~~t~~~i~~~~~~a~~~~~~av~v~p~~v~------~~~~~l~~-~~~~v~~~~~fp~g~---~~~~~k~~eve~A~~~G 82 (203)
T cd00959 13 DATEEDIRKLCDEAKEYGFAAVCVNPCFVP------LAREALKG-SGVKVCTVIGFPLGA---TTTEVKVAEAREAIADG 82 (203)
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcHHHHH------HHHHHcCC-CCcEEEEEEecCCCC---CcHHHHHHHHHHHHHcC
Confidence 447888888787777777888776522221 12222222 223444454445544 24466666688999999
Q ss_pred CcEEEEeeccc-------cchhHHHH---hc-CCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEE--ee--c
Q 012352 112 ADYIDVELQVA-------REFNDSIR---GK-KPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFA--TT--A 176 (465)
Q Consensus 112 ~~~iDiEl~~~-------~~~~~~l~---~~-~~~~~~iI~S~H~f~~tps~~el~~~~~~~~~~gadivKia--~~--~ 176 (465)
+|-||+=++.. +...+++. .. +.-..|+|+-.... +.+++....+-+.++|||++|.- .. .
T Consensus 83 Adevdvv~~~g~~~~~~~~~~~~ei~~v~~~~~g~~lkvI~e~~~l----~~~~i~~a~ria~e~GaD~IKTsTG~~~~~ 158 (203)
T cd00959 83 ADEIDMVINIGALKSGDYEAVYEEIAAVVEACGGAPLKVILETGLL----TDEEIIKACEIAIEAGADFIKTSTGFGPGG 158 (203)
T ss_pred CCEEEEeecHHHHhCCCHHHHHHHHHHHHHhcCCCeEEEEEecCCC----CHHHHHHHHHHHHHhCCCEEEcCCCCCCCC
Confidence 99999976653 11233333 22 21224444433222 35678888888999999999997 33 3
Q ss_pred CCHHHHHHHHHHhc
Q 012352 177 LDITDVARVFQITV 190 (465)
Q Consensus 177 ~~~~D~~~ll~~~~ 190 (465)
.+++|+..+.+...
T Consensus 159 at~~~v~~~~~~~~ 172 (203)
T cd00959 159 ATVEDVKLMKEAVG 172 (203)
T ss_pred CCHHHHHHHHHHhC
Confidence 57788877777655
No 462
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.85 E-value=0.053 Score=56.56 Aligned_cols=40 Identities=25% Similarity=0.263 Sum_probs=34.9
Q ss_pred ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHH
Q 012352 378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRA 417 (465)
Q Consensus 378 ~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a 417 (465)
..++++++|+|+ |.+|+.++..|.+.|++|+++.|+..+.
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~ 97 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGI 97 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhc
Confidence 356789999998 7899999999999999999999987653
No 463
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=94.84 E-value=0.044 Score=55.98 Aligned_cols=74 Identities=16% Similarity=0.149 Sum_probs=48.5
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHH-HH---HHHCC----c--c--cchh---cccccCCCCe
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARE-LA---ETVGG----H--A--LSLA---DLENFNPEDG 442 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~-la---~~~~~----~--~--~~~~---~l~~~~~~~~ 442 (465)
+++++|+|+|+ |-+|+.++..|.+.|.+|+.++|....... +. ...+. . . .++. ++.. .+.++
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~-~~~~~ 91 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQK-ACKNV 91 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHH-HhhCC
Confidence 56789999997 789999999999999999999885432221 11 11110 0 1 1222 2222 34568
Q ss_pred eEEEecCCCCC
Q 012352 443 MILANTTSIGM 453 (465)
Q Consensus 443 DilInaT~~gm 453 (465)
|+||+++..+.
T Consensus 92 d~ViHlAa~~~ 102 (348)
T PRK15181 92 DYVLHQAALGS 102 (348)
T ss_pred CEEEECccccC
Confidence 99999997653
No 464
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=94.84 E-value=0.036 Score=48.72 Aligned_cols=33 Identities=27% Similarity=0.577 Sum_probs=29.7
Q ss_pred CcEEEEEccchhHHHHHHHHHHCCC-eEEEEECC
Q 012352 381 GKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT 413 (465)
Q Consensus 381 ~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~ 413 (465)
+++|+|+|+|++|..++..|+..|+ ++++++.+
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDD 35 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCc
Confidence 4789999999999999999999999 99999853
No 465
>PRK10637 cysG siroheme synthase; Provisional
Probab=94.82 E-value=0.06 Score=57.44 Aligned_cols=41 Identities=17% Similarity=0.272 Sum_probs=36.2
Q ss_pred CcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 012352 374 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY 414 (465)
Q Consensus 374 ~~~~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~ 414 (465)
|.+.++++|+|||+|+|.+|..=+..|.+.|++|+|++.+.
T Consensus 5 P~~~~l~~~~vlvvGgG~vA~rk~~~ll~~ga~v~visp~~ 45 (457)
T PRK10637 5 PIFCQLRDRDCLLVGGGDVAERKARLLLDAGARLTVNALAF 45 (457)
T ss_pred ceEEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 45678999999999999999888889999999999998764
No 466
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=94.80 E-value=0.1 Score=52.76 Aligned_cols=70 Identities=23% Similarity=0.302 Sum_probs=51.8
Q ss_pred CcEEEEEcc-chhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcc-cchh------cccccCCCCeeEEEecCC
Q 012352 381 GKLFVVIGA-GGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLA------DLENFNPEDGMILANTTS 450 (465)
Q Consensus 381 ~k~vlV~Ga-Gg~g~ai~~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~-~~~~------~l~~~~~~~~DilInaT~ 450 (465)
+.+|+|.|+ |++|.+++..++..|+ +|+++.+++++.+.+.++++... ++.. .+.+.....+|+++++++
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g 233 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVG 233 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCC
Confidence 379999998 8999999998899999 89999999998877777677532 2211 111111246899999876
No 467
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=94.76 E-value=0.13 Score=52.24 Aligned_cols=69 Identities=28% Similarity=0.251 Sum_probs=49.3
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhcccccCCCCeeEEEecCCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~l~~~~~~~~DilInaT~~g 452 (465)
.+.+|+|.|+|++|.+++..++..|++|+++.+++++ .+++++++... ++..+.. ...+|+++.+++.+
T Consensus 165 ~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~-~~~a~~~Ga~~vi~~~~~~---~~~~d~~i~~~~~~ 234 (329)
T TIGR02822 165 PGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAA-RRLALALGAASAGGAYDTP---PEPLDAAILFAPAG 234 (329)
T ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHH-HHHHHHhCCceeccccccC---cccceEEEECCCcH
Confidence 3789999999999999888888899999999999888 56778887643 2221111 12467667666543
No 468
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=94.72 E-value=0.041 Score=55.87 Aligned_cols=33 Identities=30% Similarity=0.227 Sum_probs=30.1
Q ss_pred cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH
Q 012352 382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY 414 (465)
Q Consensus 382 k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~ 414 (465)
|++||+|+ |.+|+.++..|.+.|++|++++|..
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~ 34 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRS 34 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCC
Confidence 58999998 7899999999999999999999875
No 469
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=94.72 E-value=0.069 Score=60.30 Aligned_cols=68 Identities=21% Similarity=0.256 Sum_probs=46.6
Q ss_pred cEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCC
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~ 451 (465)
+++.|+|+|.+|.+++..|.+.|. +|++++|++++.+.+. +++.......+..+ .+.++|+||-|+|.
T Consensus 4 ~~I~IIG~G~mG~ala~~l~~~G~~~~V~~~d~~~~~~~~a~-~~g~~~~~~~~~~~-~~~~aDvVilavp~ 73 (735)
T PRK14806 4 GRVVVIGLGLIGGSFAKALRERGLAREVVAVDRRAKSLELAV-SLGVIDRGEEDLAE-AVSGADVIVLAVPV 73 (735)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCCEEEEEECChhHHHHHH-HCCCCCcccCCHHH-HhcCCCEEEECCCH
Confidence 679999999999999999999983 8999999988866543 33321001112222 23456777777764
No 470
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=94.72 E-value=0.066 Score=52.67 Aligned_cols=71 Identities=24% Similarity=0.383 Sum_probs=51.8
Q ss_pred EEEEcc-chhHHHHHHHHHHCC----CeEEEEECCHHHHHHHHHHHCCc---c--cc---hhcccccCCCCeeEEEecCC
Q 012352 384 FVVIGA-GGAGKALAYGAKAKG----ARVVIANRTYDRARELAETVGGH---A--LS---LADLENFNPEDGMILANTTS 450 (465)
Q Consensus 384 vlV~Ga-Gg~g~ai~~~L~~~G----~~v~i~~R~~~~a~~la~~~~~~---~--~~---~~~l~~~~~~~~DilInaT~ 450 (465)
+.|+|+ |.+|..+++.|+..| .+|+++++++++++..+.++... . .. .+++.+ .+.++|+||.+++
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~-~~~~aDiVv~t~~ 79 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYE-AFKDADVVIITAG 79 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHH-HhCCCCEEEECCC
Confidence 469999 789999999999888 48999999988887766655311 0 01 122233 4678999999998
Q ss_pred CCCCC
Q 012352 451 IGMQP 455 (465)
Q Consensus 451 ~gm~~ 455 (465)
.+-.+
T Consensus 80 ~~~~~ 84 (263)
T cd00650 80 VGRKP 84 (263)
T ss_pred CCCCc
Confidence 86554
No 471
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=94.72 E-value=0.041 Score=53.60 Aligned_cols=36 Identities=22% Similarity=0.333 Sum_probs=32.5
Q ss_pred cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCH
Q 012352 379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY 414 (465)
Q Consensus 379 l~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~~ 414 (465)
+++++|+|+|+||+|..++..|+..|+ ++++++++.
T Consensus 22 L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 22 LKASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred HhCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 567899999999999999999999998 999988653
No 472
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=94.70 E-value=0.026 Score=55.37 Aligned_cols=68 Identities=18% Similarity=0.168 Sum_probs=45.8
Q ss_pred EEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCCCC
Q 012352 384 FVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGM 453 (465)
Q Consensus 384 vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~gm 453 (465)
|||+|+ |.+|+.++..|.+.|++|+.++|+..+...+... ......-..+.+ .+.+.|+||++++..+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~D~Vvh~a~~~~ 69 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWE-GYKPWAPLAESE-ALEGADAVINLAGEPI 69 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccce-eeecccccchhh-hcCCCCEEEECCCCCc
Confidence 589987 7899999999999999999999987764332110 000000011222 4567899999998644
No 473
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=94.70 E-value=0.075 Score=50.81 Aligned_cols=45 Identities=27% Similarity=0.389 Sum_probs=37.8
Q ss_pred EEEEEccchhHHHHHHHHHHC--CC-eEEEEECCHHHHHHHHHHHCCc
Q 012352 383 LFVVIGAGGAGKALAYGAKAK--GA-RVVIANRTYDRARELAETVGGH 427 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~--G~-~v~i~~R~~~~a~~la~~~~~~ 427 (465)
++.++|.|.+|..++..+.+- ++ -+.+++|+.++++++.+.++..
T Consensus 2 ~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~ 49 (255)
T COG1712 2 KVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRR 49 (255)
T ss_pred eEEEEeccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCC
Confidence 578999999999999888643 35 6889999999999998887653
No 474
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.68 E-value=0.058 Score=53.56 Aligned_cols=38 Identities=26% Similarity=0.330 Sum_probs=34.9
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHH
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARE 419 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~ 419 (465)
+++.|+|+|-+|.+++..|+..|++|+++++++++.+.
T Consensus 4 ~kI~VIG~G~mG~~ia~~la~~g~~V~~~d~~~~~~~~ 41 (282)
T PRK05808 4 QKIGVIGAGTMGNGIAQVCAVAGYDVVMVDISDAAVDR 41 (282)
T ss_pred cEEEEEccCHHHHHHHHHHHHCCCceEEEeCCHHHHHH
Confidence 57999999999999999999999999999999988753
No 475
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=94.67 E-value=0.046 Score=57.46 Aligned_cols=38 Identities=26% Similarity=0.334 Sum_probs=35.4
Q ss_pred cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 012352 377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY 414 (465)
Q Consensus 377 ~~l~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~ 414 (465)
..+.||++.|+|.|.+|+.++..+..+|++|+.++|+.
T Consensus 147 ~~L~gktvGIiG~G~IG~~vA~~~~~fGm~V~~~d~~~ 184 (409)
T PRK11790 147 FEVRGKTLGIVGYGHIGTQLSVLAESLGMRVYFYDIED 184 (409)
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 46889999999999999999999999999999999864
No 476
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=94.66 E-value=0.099 Score=54.17 Aligned_cols=71 Identities=27% Similarity=0.376 Sum_probs=51.8
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchh---cccccCCCCeeEEEecCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLA---DLENFNPEDGMILANTTSI 451 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~---~l~~~~~~~~DilInaT~~ 451 (465)
.+++++|.|+|++|.+++..++..|++|+++.++.++-.+++++++... ++.. .+.+ ....+|++|++++.
T Consensus 178 ~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~-~~~~~D~vid~~G~ 252 (375)
T PLN02178 178 SGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKE-AVGTMDFIIDTVSA 252 (375)
T ss_pred CCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHH-hhCCCcEEEECCCc
Confidence 4789999999999999999999999998888887666556667777532 2221 2222 22358999999864
No 477
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=94.64 E-value=0.063 Score=53.58 Aligned_cols=39 Identities=31% Similarity=0.404 Sum_probs=34.8
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE 422 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~ 422 (465)
+++|+|+|.+|..++..|++.|.+|+++.| .++.+++.+
T Consensus 2 kI~IiG~G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~ 40 (305)
T PRK12921 2 RIAVVGAGAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRE 40 (305)
T ss_pred eEEEECCCHHHHHHHHHHHHCCCceEEEec-HHHHHHHHh
Confidence 589999999999999999999999999999 777776654
No 478
>PLN02427 UDP-apiose/xylose synthase
Probab=94.64 E-value=0.058 Score=55.86 Aligned_cols=75 Identities=19% Similarity=0.178 Sum_probs=50.6
Q ss_pred cccCCcEEEEEcc-chhHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHHH----C--Ccc--cchh---cccccCCCCee
Q 012352 377 SALAGKLFVVIGA-GGAGKALAYGAKAKG-ARVVIANRTYDRARELAETV----G--GHA--LSLA---DLENFNPEDGM 443 (465)
Q Consensus 377 ~~l~~k~vlV~Ga-Gg~g~ai~~~L~~~G-~~v~i~~R~~~~a~~la~~~----~--~~~--~~~~---~l~~~~~~~~D 443 (465)
..++.++|||+|+ |-+|+.++..|.+.| .+|+.++|+.++...+.... . ... .++. .+.+ .+.++|
T Consensus 10 ~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~-~~~~~d 88 (386)
T PLN02427 10 KPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEG-LIKMAD 88 (386)
T ss_pred CcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHH-HhhcCC
Confidence 3455678999997 789999999999985 79999999877665543221 0 011 1221 2223 345689
Q ss_pred EEEecCCCC
Q 012352 444 ILANTTSIG 452 (465)
Q Consensus 444 ilInaT~~g 452 (465)
+|||+++..
T Consensus 89 ~ViHlAa~~ 97 (386)
T PLN02427 89 LTINLAAIC 97 (386)
T ss_pred EEEEccccc
Confidence 999999753
No 479
>PRK08507 prephenate dehydrogenase; Validated
Probab=94.64 E-value=0.074 Score=52.63 Aligned_cols=66 Identities=17% Similarity=0.193 Sum_probs=46.7
Q ss_pred EEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCCC
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
++.|+|.|.+|.+++..|.+.|. +|++++|++++.+.+. +.+... ...+..+ ..++|+||-|+|..
T Consensus 2 ~I~iIG~G~mG~sla~~l~~~g~~~~v~~~d~~~~~~~~~~-~~g~~~-~~~~~~~--~~~aD~Vilavp~~ 69 (275)
T PRK08507 2 KIGIIGLGLMGGSLGLALKEKGLISKVYGYDHNELHLKKAL-ELGLVD-EIVSFEE--LKKCDVIFLAIPVD 69 (275)
T ss_pred EEEEEccCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHH-HCCCCc-ccCCHHH--HhcCCEEEEeCcHH
Confidence 58899999999999999999885 7999999998877654 333210 0111222 12378888888764
No 480
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=94.61 E-value=0.073 Score=47.34 Aligned_cols=38 Identities=29% Similarity=0.469 Sum_probs=34.0
Q ss_pred EEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Q 012352 384 FVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE 422 (465)
Q Consensus 384 vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~ 422 (465)
++|+|+|++|.-.++.|++.|.+|+++.|.. +++.+.+
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~ 38 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKE 38 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHH
T ss_pred CEEECcCHHHHHHHHHHHHCCCceEEEEccc-cHHhhhh
Confidence 6899999999999999999999999999998 7777543
No 481
>PTZ00117 malate dehydrogenase; Provisional
Probab=94.58 E-value=0.094 Score=53.25 Aligned_cols=73 Identities=18% Similarity=0.192 Sum_probs=50.9
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHC--Cc------ccc-hhcccccCCCCeeEEEecC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVG--GH------ALS-LADLENFNPEDGMILANTT 449 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G-~~v~i~~R~~~~a~~la~~~~--~~------~~~-~~~l~~~~~~~~DilInaT 449 (465)
+.+++.|+|+|.+|..+++.++..| .++.++++++++++..+-++. .. .+. ..+. + .+.++|+||.+.
T Consensus 4 ~~~KI~IIGaG~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~-~-~l~~ADiVVita 81 (319)
T PTZ00117 4 KRKKISMIGAGQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNY-E-DIKDSDVVVITA 81 (319)
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCH-H-HhCCCCEEEECC
Confidence 4578999999999999999999989 499999998876554332221 10 011 1122 2 356899999999
Q ss_pred CCCCC
Q 012352 450 SIGMQ 454 (465)
Q Consensus 450 ~~gm~ 454 (465)
+.+-.
T Consensus 82 g~~~~ 86 (319)
T PTZ00117 82 GVQRK 86 (319)
T ss_pred CCCCC
Confidence 77544
No 482
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=94.57 E-value=0.05 Score=54.34 Aligned_cols=71 Identities=27% Similarity=0.352 Sum_probs=56.7
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc----chhcccccCCCCeeEEEecCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL----SLADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~----~~~~l~~~~~~~~DilInaT~~ 451 (465)
..-+|.|+|.|-+|-..++-...+|++|+|.+++.+|.+.+-+.++.+.. ....+.+ ...++|+||++.=+
T Consensus 167 ~~~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee-~v~~aDlvIgaVLI 241 (371)
T COG0686 167 LPAKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEE-AVKKADLVIGAVLI 241 (371)
T ss_pred CCccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHH-HhhhccEEEEEEEe
Confidence 34579999999888888888889999999999999999999998886532 2234444 56788999988633
No 483
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=94.55 E-value=0.1 Score=53.63 Aligned_cols=71 Identities=24% Similarity=0.355 Sum_probs=51.4
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCc-ccchh------cccccCCCCeeEEEecCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH-ALSLA------DLENFNPEDGMILANTTSI 451 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~-~~~~~------~l~~~~~~~~DilInaT~~ 451 (465)
.+++|+|.|+|++|..++..++..|+ +|+++.+++++.+ ++++++.. .++.. ++.+...+.+|++|++++.
T Consensus 191 ~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~-~a~~~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~ 269 (371)
T cd08281 191 PGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLA-LARELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGS 269 (371)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHH-HHHHcCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCC
Confidence 36799999999999999999999999 7999999988855 55777753 22221 1221112358999999864
No 484
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=94.55 E-value=0.15 Score=50.89 Aligned_cols=69 Identities=19% Similarity=0.208 Sum_probs=50.6
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhcccccCCCCeeEEEecCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~l~~~~~~~~DilInaT~~ 451 (465)
.+.+++|.|+|++|.+++..++..|++|+++.++.++.+.+. .++... ..+.+.. ....+|+++++++.
T Consensus 155 ~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~--~~~~~d~vid~~g~ 224 (319)
T cd08242 155 PGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLALAR-RLGVETVLPDEAES--EGGGFDVVVEATGS 224 (319)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEeCccccc--cCCCCCEEEECCCC
Confidence 467899999999999999999999999999998888766554 476432 2222211 22458999998754
No 485
>PLN02712 arogenate dehydrogenase
Probab=94.53 E-value=0.097 Score=58.44 Aligned_cols=69 Identities=22% Similarity=0.218 Sum_probs=46.4
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG 452 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~g 452 (465)
..+++.|+|.|.+|++++..|.+.|.+|++++|+..+ ..+.+++... ..+..+....++|+||-|+|..
T Consensus 51 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~--~~A~~~Gv~~--~~d~~e~~~~~aDvViLavP~~ 119 (667)
T PLN02712 51 TQLKIAIIGFGNYGQFLAKTLISQGHTVLAHSRSDHS--LAARSLGVSF--FLDPHDLCERHPDVILLCTSII 119 (667)
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHcCCEE--eCCHHHHhhcCCCEEEEcCCHH
Confidence 3468999999999999999999999999999998544 3355555321 1111110112367777777643
No 486
>PLN02240 UDP-glucose 4-epimerase
Probab=94.51 E-value=0.069 Score=54.17 Aligned_cols=35 Identities=26% Similarity=0.401 Sum_probs=31.3
Q ss_pred cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC
Q 012352 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT 413 (465)
Q Consensus 379 l~~k~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~ 413 (465)
+.+|+++|+|+ |++|+.++..|.+.|++|++++|.
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~ 38 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNL 38 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 56789999987 789999999999999999999764
No 487
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=94.50 E-value=0.05 Score=57.15 Aligned_cols=40 Identities=25% Similarity=0.249 Sum_probs=36.9
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE 422 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~ 422 (465)
+|.|+|.|-+|..++..|++.|++|++++|++++.+.+.+
T Consensus 2 kI~vIGlG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~ 41 (411)
T TIGR03026 2 KIAVIGLGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNK 41 (411)
T ss_pred EEEEECCCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhc
Confidence 5889999999999999999999999999999999887764
No 488
>PRK14041 oxaloacetate decarboxylase; Provisional
Probab=94.49 E-value=5.6 Score=42.61 Aligned_cols=228 Identities=14% Similarity=0.136 Sum_probs=140.2
Q ss_pred cccccCCCCCCcEE-EEeeccCCHHHHHHHHHhhhhcCCCEEEE----EecC---CCCCCchhHHHHHHhhC-CCcEEEE
Q 012352 13 KLVSGGMRKNPTLI-CVPIMGESVDKMVVDMGKANASGADLVEI----RLDG---LKNFNPRENIKTLIKES-PVPTLFT 83 (465)
Q Consensus 13 ~~~~~~~~~~~~~i-cv~l~~~t~~e~~~~~~~~~~~~~D~vEl----RlD~---l~~~~~~~~l~~l~~~~-~~PiI~T 83 (465)
+|..-++++..-.. .+.+ +.++.+.-++.+.+.|.+.+|. ..|. |-+.++.+.++.+++.. +.++-.-
T Consensus 4 ~I~DtTlRDG~Qs~~~~~~---~t~dkl~Ia~~Ld~~Gv~~IE~~ggatfd~~~~Fl~e~p~e~l~~l~~~~~~~~l~~l 80 (467)
T PRK14041 4 MFVDTTLRDGHQSLIATRM---RTEDMLPALEAFDRMGFYSMEVWGGATFDVCVRFLNENPWERLKEIRKRLKNTKIQML 80 (467)
T ss_pred EEEECCCCccccCcCCccC---CHHHHHHHHHHHHHcCCCEEEecCCccchhhhcccCCCHHHHHHHHHHhCCCCEEEEE
Confidence 44555566655443 3333 4455555555555679999999 3332 12224566777776543 4556555
Q ss_pred eccCCCCCCCCCCHHHHHHHHHHHHHhCCcEEEEeecccc--chhHHHHhcCCCCcEEEEEecc-CCCCC--CHHHHHHH
Q 012352 84 YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAR--EFNDSIRGKKPEKCKVIVSSHN-YQYTP--SVEDLSNL 158 (465)
Q Consensus 84 ~R~~~eGG~~~~~~~~~~~~l~~~~~~~~~~iDiEl~~~~--~~~~~l~~~~~~~~~iI~S~H~-f~~tp--s~~el~~~ 158 (465)
+|..+--|.....++-...+++.+++.|++.+-|=....+ ...+.+..++..+..+...... | .| +.+.+.+.
T Consensus 81 ~r~~N~~G~~~~~dDvv~~fv~~A~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G~~v~~~i~~t~--~p~~t~e~~~~~ 158 (467)
T PRK14041 81 LRGQNLVGYRHYADDVVELFVKKVAEYGLDIIRIFDALNDIRNLEKSIEVAKKHGAHVQGAISYTV--SPVHTLEYYLEF 158 (467)
T ss_pred eccccccCcccccchhhHHHHHHHHHCCcCEEEEEEeCCHHHHHHHHHHHHHHCCCEEEEEEEecc--CCCCCHHHHHHH
Confidence 7876666653444444556788899999998887544332 1222222233345555533332 3 24 56779999
Q ss_pred HHHHHHcCCCEEEEEeec--CCHHHHHHHHHHhcc-CCCCEEEE--ecCccchhhhhhccccCCccccccccCccCCCCC
Q 012352 159 VARIQASGADIVKFATTA--LDITDVARVFQITVH-SQVPIIGL--VMGERGLISRILCAKFGGFLTFGTLENGIVSAPG 233 (465)
Q Consensus 159 ~~~~~~~gadivKia~~~--~~~~D~~~ll~~~~~-~~~p~i~~--~MG~~G~~sRi~~~~~Gs~~tf~~~~~~~~sApG 233 (465)
.+++.+.|||.+=|+=|. -+|.++.++...++. .+.|+-.. +.-.+|..+=+..-..|....=+++.. .+...|
T Consensus 159 a~~l~~~Gad~I~i~Dt~G~l~P~~v~~Lv~~lk~~~~vpI~~H~Hnt~GlA~AN~laAieaGad~vD~sv~~-~g~gag 237 (467)
T PRK14041 159 ARELVDMGVDSICIKDMAGLLTPKRAYELVKALKKKFGVPVEVHSHCTTGLASLAYLAAVEAGADMFDTAISP-FSMGTS 237 (467)
T ss_pred HHHHHHcCCCEEEECCccCCcCHHHHHHHHHHHHHhcCCceEEEecCCCCcHHHHHHHHHHhCCCEEEeeccc-cCCCCC
Confidence 999999999998888665 578999999887654 35666543 344445555666666676655556553 233457
Q ss_pred CCChhhHHhhhcc
Q 012352 234 QPTIKDLLDLYNF 246 (465)
Q Consensus 234 Q~~~~~l~~~~~~ 246 (465)
|++.+++-..++-
T Consensus 238 N~atE~lv~~L~~ 250 (467)
T PRK14041 238 QPPFESMYYAFRE 250 (467)
T ss_pred ChhHHHHHHHHHh
Confidence 9999998877764
No 489
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=94.46 E-value=0.076 Score=53.74 Aligned_cols=73 Identities=19% Similarity=0.119 Sum_probs=52.5
Q ss_pred CCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHH--HHHHHCC-c----c--cchhc---ccccCCCCeeEEE
Q 012352 380 AGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARE--LAETVGG-H----A--LSLAD---LENFNPEDGMILA 446 (465)
Q Consensus 380 ~~k~vlV~GaG-g~g~ai~~~L~~~G~~v~i~~R~~~~a~~--la~~~~~-~----~--~~~~~---l~~~~~~~~DilI 446 (465)
.+++|+|+||+ -+|..++..|.++|+.|.-.-|++++-+. ...++.+ . . .|+.+ +.. .+.+.|.|+
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~-ai~gcdgVf 83 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDK-AIDGCDGVF 83 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHH-HHhCCCEEE
Confidence 46899999996 59999999999999999999999887444 3444432 1 1 12222 233 467899999
Q ss_pred ecCCCCC
Q 012352 447 NTTSIGM 453 (465)
Q Consensus 447 naT~~gm 453 (465)
++++--.
T Consensus 84 H~Asp~~ 90 (327)
T KOG1502|consen 84 HTASPVD 90 (327)
T ss_pred EeCccCC
Confidence 9886543
No 490
>PRK08309 short chain dehydrogenase; Provisional
Probab=94.43 E-value=0.11 Score=48.06 Aligned_cols=42 Identities=21% Similarity=0.199 Sum_probs=37.4
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Q 012352 383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV 424 (465)
Q Consensus 383 ~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~ 424 (465)
+++|+|+.|++.+++..|.+.|++|.+..|+.++++.+...+
T Consensus 2 ~vlVtGGtG~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l 43 (177)
T PRK08309 2 HALVIGGTGMLKRVSLWLCEKGFHVSVIARREVKLENVKRES 43 (177)
T ss_pred EEEEECcCHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHh
Confidence 589999888989999999999999999999999888877655
No 491
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=94.41 E-value=0.15 Score=52.34 Aligned_cols=71 Identities=23% Similarity=0.313 Sum_probs=52.6
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cch---hcccccCCCCeeEEEecCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSL---ADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~---~~l~~~~~~~~DilInaT~~ 451 (465)
.+.+++|.|+|++|.+++..++..|++++++.++.++...+.++++... +.. +.+.+ ....+|++|++++.
T Consensus 180 ~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~-~~~~~D~vid~~g~ 254 (357)
T PLN02514 180 SGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQE-AADSLDYIIDTVPV 254 (357)
T ss_pred CCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHH-hcCCCcEEEECCCc
Confidence 4678999999999999999999999998888888888777777777532 211 11222 12358999999874
No 492
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=94.40 E-value=0.14 Score=49.16 Aligned_cols=71 Identities=25% Similarity=0.406 Sum_probs=50.3
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc-ccchhc------ccccCCCCeeEEEecCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-ALSLAD------LENFNPEDGMILANTTSI 451 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~-~~~~~~------l~~~~~~~~DilInaT~~ 451 (465)
.+++++|+|+|++|++++..+...|.+|+++.+++++.+.+ ..++.. .++..+ +.....+.+|++|++++.
T Consensus 134 ~~~~vli~g~~~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~ 211 (271)
T cd05188 134 PGDTVLVLGAGGVGLLAAQLAKAAGARVIVTDRSDEKLELA-KELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGG 211 (271)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCC
Confidence 46799999999999999999999999999999998776655 445432 122111 100023468999999875
No 493
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=94.34 E-value=0.13 Score=52.00 Aligned_cols=71 Identities=20% Similarity=0.311 Sum_probs=51.6
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCe-EEEEECCHHHHHHHHHHHCCcc-cchh-----ccccc-CCCCeeEEEecCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHA-LSLA-----DLENF-NPEDGMILANTTSI 451 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~~-v~i~~R~~~~a~~la~~~~~~~-~~~~-----~l~~~-~~~~~DilInaT~~ 451 (465)
.+.+++|+|+|++|.+++..++..|++ |+++++++++.+ ++.+++... ++.. .+.+. ....+|++|++++.
T Consensus 163 ~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~-~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~d~vid~~g~ 241 (339)
T cd08239 163 GRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLE-LAKALGADFVINSGQDDVQEIRELTSGAGADVAIECSGN 241 (339)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHhCCCEEEcCCcchHHHHHHHhCCCCCCEEEECCCC
Confidence 378999999999999999999999996 999999988854 456777532 2221 12111 12368999999864
No 494
>PRK09282 pyruvate carboxylase subunit B; Validated
Probab=94.33 E-value=4.4 Score=44.74 Aligned_cols=228 Identities=15% Similarity=0.155 Sum_probs=143.6
Q ss_pred cccccCCCCCCcEEEEeeccCCHHHHHHHHHhhhhcCCCEEEEE----ecC---CCCCCchhHHHHHHhhC-CCcEEEEe
Q 012352 13 KLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIR----LDG---LKNFNPRENIKTLIKES-PVPTLFTY 84 (465)
Q Consensus 13 ~~~~~~~~~~~~~icv~l~~~t~~e~~~~~~~~~~~~~D~vElR----lD~---l~~~~~~~~l~~l~~~~-~~PiI~T~ 84 (465)
+|..-++++..-... -+.=+.++.+.-+..+...|.+.+|.- .|. |-.-++.+.++.+++.. +.++-.-+
T Consensus 5 ~i~DtTlRDG~Qs~~--atr~~t~d~l~ia~~l~~~G~~~iE~~ggatfd~~~rfl~edp~e~l~~l~~~~~~~~l~~l~ 82 (592)
T PRK09282 5 KITDTTLRDAHQSLL--ATRMRTEDMLPIAEKLDKVGFWSLEVWGGATFDVCIRYLNEDPWERLRKLKKALPNTPLQMLL 82 (592)
T ss_pred EEEECCCCccccccC--CccCCHHHHHHHHHHHHHcCCCEEEecCCccchhhcccCCccHHHHHHHHHHhCCCCEEEEEe
Confidence 455556666654442 122344455555555556799999995 552 22235667787776553 56777778
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHHhCCcEEEEeeccc--cchhHHHHhcCCCCcEEE--EEeccCCCCC--CHHHHHHH
Q 012352 85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVA--REFNDSIRGKKPEKCKVI--VSSHNYQYTP--SVEDLSNL 158 (465)
Q Consensus 85 R~~~eGG~~~~~~~~~~~~l~~~~~~~~~~iDiEl~~~--~~~~~~l~~~~~~~~~iI--~S~H~f~~tp--s~~el~~~ 158 (465)
|..+-=|..+-.++-..+.++.+.+.|++.+=|=.... +...+.+..++..+..+- +||- + .| +.+.+.+.
T Consensus 83 Rg~N~~gy~~ypd~vv~~~v~~A~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G~~v~~~i~~t-~--~p~~t~~~~~~~ 159 (592)
T PRK09282 83 RGQNLVGYRHYPDDVVEKFVEKAAENGIDIFRIFDALNDVRNMEVAIKAAKKAGAHVQGTISYT-T--SPVHTIEKYVEL 159 (592)
T ss_pred ccccccccccccchhhHHHHHHHHHCCCCEEEEEEecChHHHHHHHHHHHHHcCCEEEEEEEec-c--CCCCCHHHHHHH
Confidence 87666666556666777788999999999877754332 222222332333444444 3332 2 34 56789999
Q ss_pred HHHHHHcCCCEEEEEeec--CCHHHHHHHHHHhcc-CCCCEEE--EecCccchhhhhhccccCCccccccccCccCCCCC
Q 012352 159 VARIQASGADIVKFATTA--LDITDVARVFQITVH-SQVPIIG--LVMGERGLISRILCAKFGGFLTFGTLENGIVSAPG 233 (465)
Q Consensus 159 ~~~~~~~gadivKia~~~--~~~~D~~~ll~~~~~-~~~p~i~--~~MG~~G~~sRi~~~~~Gs~~tf~~~~~~~~sApG 233 (465)
.+++.+.|+|.+=|+=|. -+|.++.++.+.+.. .+.|+-. .+...++..+=+..-..|..+.=+++.. ...-.|
T Consensus 160 a~~l~~~Gad~I~i~Dt~G~~~P~~~~~lv~~lk~~~~~pi~~H~Hnt~Gla~An~laAv~aGad~vD~ai~g-~g~~ag 238 (592)
T PRK09282 160 AKELEEMGCDSICIKDMAGLLTPYAAYELVKALKEEVDLPVQLHSHCTSGLAPMTYLKAVEAGVDIIDTAISP-LAFGTS 238 (592)
T ss_pred HHHHHHcCCCEEEECCcCCCcCHHHHHHHHHHHHHhCCCeEEEEEcCCCCcHHHHHHHHHHhCCCEEEeeccc-cCCCcC
Confidence 999999999998888665 468999998887654 3555443 4455556666666666676655555553 223357
Q ss_pred CCChhhHHhhhcc
Q 012352 234 QPTIKDLLDLYNF 246 (465)
Q Consensus 234 Q~~~~~l~~~~~~ 246 (465)
|+++.++...++.
T Consensus 239 n~~~e~vv~~L~~ 251 (592)
T PRK09282 239 QPPTESMVAALKG 251 (592)
T ss_pred CHhHHHHHHHHHh
Confidence 9998888776664
No 495
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=94.32 E-value=0.12 Score=51.79 Aligned_cols=66 Identities=17% Similarity=0.130 Sum_probs=45.2
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCCe-EEEEECCHHHHHHHHHHHCCcccchhcccccCCCCeeEEEecCCC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI 451 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~~-v~i~~R~~~~a~~la~~~~~~~~~~~~l~~~~~~~~DilInaT~~ 451 (465)
.+++++|+|+|++|..++..++..|++ |.+++++.++.+.. ..+ ..++..+ . ....+|++|+|++.
T Consensus 144 ~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a-~~~--~~i~~~~--~-~~~g~Dvvid~~G~ 210 (308)
T TIGR01202 144 KVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGA-TGY--EVLDPEK--D-PRRDYRAIYDASGD 210 (308)
T ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhh-hhc--cccChhh--c-cCCCCCEEEECCCC
Confidence 356899999999999999988899995 77778877775432 222 1122111 1 12357999999875
No 496
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=94.30 E-value=0.1 Score=52.08 Aligned_cols=38 Identities=29% Similarity=0.296 Sum_probs=35.1
Q ss_pred cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHH
Q 012352 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARE 419 (465)
Q Consensus 382 k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~ 419 (465)
++|.|+|+|-+|.+++..|+..|++|+++++++++.+.
T Consensus 5 ~~V~vIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~ 42 (295)
T PLN02545 5 KKVGVVGAGQMGSGIAQLAAAAGMDVWLLDSDPAALSR 42 (295)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHH
Confidence 67999999999999999999999999999999988653
No 497
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=94.26 E-value=0.095 Score=56.58 Aligned_cols=40 Identities=25% Similarity=0.304 Sum_probs=36.6
Q ss_pred CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHH
Q 012352 381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL 420 (465)
Q Consensus 381 ~k~vlV~GaGg~g~ai~~~L~~~G~~v~i~~R~~~~a~~l 420 (465)
-++|.|+|+|-||+.|+..|+..|++|++++|++++++..
T Consensus 5 ~~kV~VIGaG~MG~gIA~~la~aG~~V~l~d~~~e~l~~~ 44 (503)
T TIGR02279 5 VVTVAVIGAGAMGAGIAQVAASAGHQVLLYDIRAEALARA 44 (503)
T ss_pred ccEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 3679999999999999999999999999999999988754
No 498
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=94.25 E-value=0.024 Score=56.59 Aligned_cols=67 Identities=21% Similarity=0.167 Sum_probs=45.9
Q ss_pred EEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchh---cccccCCCCeeEEEecCCC
Q 012352 383 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLA---DLENFNPEDGMILANTTSI 451 (465)
Q Consensus 383 ~vlV~Ga-Gg~g~ai~~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~---~l~~~~~~~~DilInaT~~ 451 (465)
+++|+|+ |.+|+.++..|.+.|++|++++|+.++...+.. .+... .++. ++.+ .+..+|+||++++.
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~l~~-~~~~~d~vi~~a~~ 74 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEG-LDVEIVEGDLRDPASLRK-AVAGCRALFHVAAD 74 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccccc-CCceEEEeeCCCHHHHHH-HHhCCCEEEEecee
Confidence 6899987 789999999999999999999998766443321 11111 1222 2333 34567999998753
No 499
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=94.20 E-value=0.056 Score=56.16 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=31.2
Q ss_pred CcEEEEEc-cchhHHHHHHHHHHCCCeEEEEECCH
Q 012352 381 GKLFVVIG-AGGAGKALAYGAKAKGARVVIANRTY 414 (465)
Q Consensus 381 ~k~vlV~G-aGg~g~ai~~~L~~~G~~v~i~~R~~ 414 (465)
.+++.|+| .|.+|.+++.+|.+.|..|++++|+.
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~ 132 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD 132 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence 47899998 89999999999999999999999864
No 500
>PLN02740 Alcohol dehydrogenase-like
Probab=94.17 E-value=0.13 Score=53.22 Aligned_cols=71 Identities=18% Similarity=0.279 Sum_probs=51.4
Q ss_pred CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCc-ccchh--------cccccCCCCeeEEEecC
Q 012352 380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH-ALSLA--------DLENFNPEDGMILANTT 449 (465)
Q Consensus 380 ~~k~vlV~GaGg~g~ai~~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~-~~~~~--------~l~~~~~~~~DilInaT 449 (465)
.+++|+|+|+|++|.+++..++..|+ +|+++.+++++.+. +++++.. .++.. .+.+...+.+|++|+++
T Consensus 198 ~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~-a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~ 276 (381)
T PLN02740 198 AGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEK-GKEMGITDFINPKDSDKPVHERIREMTGGGVDYSFECA 276 (381)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHH-HHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECC
Confidence 47899999999999999999999999 79999999888554 4667643 22211 11111112689999998
Q ss_pred CC
Q 012352 450 SI 451 (465)
Q Consensus 450 ~~ 451 (465)
+.
T Consensus 277 G~ 278 (381)
T PLN02740 277 GN 278 (381)
T ss_pred CC
Confidence 85
Done!