Query 012353
Match_columns 465
No_of_seqs 305 out of 2120
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 01:45:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012353.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012353hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1393 Hydroxymethylglutaryl- 100.0 8E-105 2E-109 766.9 32.0 444 2-450 9-455 (462)
2 PLN02577 hydroxymethylglutaryl 100.0 3E-100 6E-105 787.2 42.1 459 1-465 1-459 (459)
3 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 5.5E-96 1E-100 754.5 39.0 446 4-449 1-454 (454)
4 COG3425 PksG 3-hydroxy-3-methy 100.0 3.6E-82 7.7E-87 624.2 31.3 375 3-448 1-376 (377)
5 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 2.6E-71 5.7E-76 568.0 36.4 377 5-446 1-379 (379)
6 PF08540 HMG_CoA_synt_C: Hydro 100.0 3.9E-62 8.5E-67 473.3 17.3 270 175-449 1-282 (282)
7 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 2E-52 4.3E-57 412.3 27.2 306 3-371 2-323 (323)
8 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 2.4E-51 5.2E-56 415.9 30.6 334 4-407 1-340 (345)
9 PRK04262 hypothetical protein; 100.0 3.3E-51 7.1E-56 415.7 30.8 335 3-407 1-341 (347)
10 PF01154 HMG_CoA_synt_N: Hydro 100.0 7.3E-50 1.6E-54 357.0 13.9 174 1-174 1-174 (174)
11 PRK05963 3-oxoacyl-(acyl carri 100.0 2.1E-47 4.4E-52 384.8 29.3 302 4-370 3-326 (326)
12 PRK12879 3-oxoacyl-(acyl carri 100.0 5.6E-46 1.2E-50 374.1 30.0 308 1-371 1-325 (325)
13 PRK12880 3-oxoacyl-(acyl carri 100.0 3.9E-45 8.5E-50 371.1 28.7 301 3-372 6-340 (353)
14 PRK07204 3-oxoacyl-(acyl carri 100.0 7.9E-45 1.7E-49 366.5 30.0 306 1-370 1-329 (329)
15 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 1.5E-44 3.3E-49 364.0 29.0 304 3-371 1-326 (326)
16 PRK09258 3-oxoacyl-(acyl carri 100.0 1.9E-44 4E-49 365.0 26.6 306 3-370 4-338 (338)
17 PLN02326 3-oxoacyl-[acyl-carri 100.0 9.7E-44 2.1E-48 364.8 28.4 305 2-370 45-379 (379)
18 PRK06840 hypothetical protein; 100.0 2.1E-43 4.5E-48 357.6 29.9 308 1-372 1-337 (339)
19 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 3.6E-43 7.8E-48 352.6 28.8 305 3-370 1-318 (318)
20 cd00830 KAS_III Ketoacyl-acyl 100.0 4.6E-43 9.9E-48 351.8 26.9 301 4-367 1-319 (320)
21 PRK09352 3-oxoacyl-(acyl carri 100.0 4.9E-42 1.1E-46 344.5 29.5 306 3-371 2-319 (319)
22 PRK06816 3-oxoacyl-(acyl carri 100.0 6E-42 1.3E-46 351.4 27.3 312 3-371 1-378 (378)
23 PLN03169 chalcone synthase fam 100.0 8.1E-42 1.7E-46 350.9 25.7 309 2-370 19-388 (391)
24 cd00831 CHS_like Chalcone and 100.0 4.5E-42 9.9E-47 350.7 23.0 307 5-368 2-361 (361)
25 cd00827 init_cond_enzymes "ini 100.0 1.7E-39 3.6E-44 326.6 26.7 304 4-367 1-323 (324)
26 PLN03171 chalcone synthase-lik 100.0 5.4E-39 1.2E-43 330.7 25.3 309 4-372 22-396 (399)
27 PLN03172 chalcone synthase fam 100.0 5.8E-38 1.3E-42 321.7 27.4 308 5-372 17-388 (393)
28 PLN03168 chalcone synthase; Pr 100.0 3.7E-38 8E-43 323.2 23.2 307 5-372 16-387 (389)
29 PLN03170 chalcone synthase; Pr 100.0 5.5E-38 1.2E-42 322.9 21.8 306 5-372 21-392 (401)
30 PRK07515 3-oxoacyl-(acyl carri 100.0 2.6E-37 5.7E-42 316.8 24.7 303 4-369 2-370 (372)
31 PLN03173 chalcone synthase; Pr 100.0 4E-37 8.6E-42 315.3 25.2 308 5-372 17-388 (391)
32 PLN02377 3-ketoacyl-CoA syntha 100.0 6.8E-36 1.5E-40 311.3 28.5 315 2-372 95-479 (502)
33 PLN02854 3-ketoacyl-CoA syntha 100.0 2.5E-35 5.4E-40 307.0 27.0 312 2-372 111-495 (521)
34 PLN02932 3-ketoacyl-CoA syntha 100.0 5.1E-35 1.1E-39 303.1 25.6 311 1-372 64-455 (478)
35 PLN02192 3-ketoacyl-CoA syntha 100.0 4.2E-34 9.1E-39 297.2 25.2 312 2-372 99-483 (511)
36 PLN00415 3-ketoacyl-CoA syntha 100.0 7E-32 1.5E-36 276.5 22.4 318 1-372 56-441 (466)
37 COG3424 BcsA Predicted naringe 100.0 2.4E-31 5.2E-36 252.5 23.3 306 6-372 3-354 (356)
38 cd00327 cond_enzymes Condensin 99.9 3.7E-27 8.1E-32 228.4 15.6 236 53-368 7-254 (254)
39 cd00825 decarbox_cond_enzymes 99.9 1E-23 2.3E-28 212.4 15.1 245 53-368 11-332 (332)
40 PF00195 Chal_sti_synt_N: Chal 99.9 5.6E-23 1.2E-27 193.3 12.1 167 2-173 12-226 (226)
41 PRK06147 3-oxoacyl-(acyl carri 99.8 6.7E-17 1.4E-21 164.2 21.5 303 1-371 1-343 (348)
42 PF08392 FAE1_CUT1_RppA: FAE1/ 99.8 1.2E-17 2.6E-22 161.5 15.0 168 1-174 5-208 (290)
43 PF08541 ACP_syn_III_C: 3-Oxoa 99.7 4.4E-17 9.4E-22 133.0 7.9 88 233-370 3-90 (90)
44 TIGR02845 spore_V_AD stage V s 99.7 4E-15 8.6E-20 145.9 20.9 113 50-173 47-172 (327)
45 PRK08304 stage V sporulation p 99.6 8.6E-14 1.9E-18 136.8 20.7 113 50-173 53-178 (337)
46 cd00834 KAS_I_II Beta-ketoacyl 99.5 5.7E-13 1.2E-17 138.2 21.1 180 52-257 70-311 (406)
47 smart00825 PKS_KS Beta-ketoacy 99.4 3.3E-12 7.1E-17 133.4 17.7 176 54-255 88-313 (424)
48 cd00829 SCP-x_thiolase Thiolas 99.4 8.7E-12 1.9E-16 128.2 19.9 106 38-149 2-107 (375)
49 PRK09051 beta-ketothiolase; Pr 99.4 1.3E-11 2.7E-16 127.5 20.1 98 49-150 23-121 (394)
50 PRK06064 acetyl-CoA acetyltran 99.4 6.1E-11 1.3E-15 122.5 23.7 105 38-148 8-114 (389)
51 PRK12404 stage V sporulation p 99.3 1.3E-10 2.7E-15 114.0 19.0 113 50-173 51-176 (334)
52 cd00828 elong_cond_enzymes "el 99.3 2.5E-10 5.4E-15 118.6 20.1 180 52-257 71-310 (407)
53 cd00833 PKS polyketide synthas 99.3 4.6E-11 9.9E-16 124.5 14.3 178 53-256 87-314 (421)
54 PRK06501 3-oxoacyl-(acyl carri 99.3 1.4E-09 3E-14 113.7 25.0 228 3-257 11-325 (425)
55 cd00751 thiolase Thiolase are 99.3 1.7E-11 3.6E-16 126.6 10.1 97 49-149 18-114 (386)
56 TIGR01930 AcCoA-C-Actrans acet 99.2 3.6E-11 7.8E-16 124.0 11.1 96 50-149 18-113 (386)
57 TIGR03150 fabF beta-ketoacyl-a 99.2 1.1E-09 2.5E-14 113.6 21.7 179 53-257 71-311 (407)
58 PRK06445 acetyl-CoA acetyltran 99.2 9.3E-10 2E-14 113.8 19.2 94 50-149 29-125 (394)
59 PRK08256 lipid-transfer protei 99.2 1.6E-09 3.5E-14 112.1 20.9 104 38-149 7-110 (391)
60 PRK12578 acetyl-CoA acetyltran 99.2 9.6E-11 2.1E-15 120.9 11.8 107 37-149 6-112 (385)
61 PF02797 Chal_sti_synt_C: Chal 99.2 6.7E-11 1.5E-15 105.4 8.7 105 215-371 40-150 (151)
62 PF08545 ACP_syn_III: 3-Oxoacy 99.2 1E-11 2.3E-16 98.9 2.9 61 111-173 1-65 (80)
63 PRK05656 acetyl-CoA acetyltran 99.2 1.5E-10 3.2E-15 119.8 11.6 99 49-151 22-120 (393)
64 PRK08313 acetyl-CoA acetyltran 99.2 1.2E-10 2.7E-15 120.0 10.5 106 37-148 8-115 (386)
65 PRK07103 polyketide beta-ketoa 99.1 1.9E-09 4.1E-14 112.2 18.5 177 53-257 80-317 (410)
66 PRK08235 acetyl-CoA acetyltran 99.1 2.4E-10 5.3E-15 118.0 11.0 98 49-150 22-119 (393)
67 PRK06205 acetyl-CoA acetyltran 99.1 2.2E-10 4.8E-15 118.9 10.6 97 50-150 23-119 (404)
68 PRK07108 acetyl-CoA acetyltran 99.1 2.8E-10 6.1E-15 117.5 11.0 99 49-151 23-122 (392)
69 PRK06059 lipid-transfer protei 99.1 4.5E-10 9.8E-15 116.5 11.1 105 38-149 10-115 (399)
70 PRK09052 acetyl-CoA acetyltran 99.1 5.3E-10 1.1E-14 115.7 11.5 97 50-150 28-126 (399)
71 PRK08722 3-oxoacyl-(acyl carri 99.1 3.2E-08 6.8E-13 103.1 24.5 227 3-257 4-314 (414)
72 PRK05952 3-oxoacyl-(acyl carri 99.1 2.5E-08 5.5E-13 102.6 23.0 223 3-257 2-290 (381)
73 PRK05790 putative acyltransfer 99.1 6.8E-10 1.5E-14 114.9 11.2 96 50-149 23-118 (393)
74 PRK08242 acetyl-CoA acetyltran 99.1 7.4E-10 1.6E-14 114.4 11.4 98 49-150 24-122 (402)
75 PRK09116 3-oxoacyl-(acyl carri 99.1 6.2E-08 1.3E-12 100.6 25.0 223 3-256 2-310 (405)
76 PRK08170 acetyl-CoA acetyltran 99.0 1.2E-09 2.7E-14 114.0 11.3 97 50-150 24-120 (426)
77 PRK07314 3-oxoacyl-(acyl carri 99.0 1.9E-08 4.1E-13 104.8 19.8 228 3-257 2-312 (411)
78 PRK06333 3-oxoacyl-(acyl carri 99.0 1.6E-08 3.6E-13 105.7 19.4 178 53-257 82-324 (424)
79 PRK09185 3-oxoacyl-(acyl carri 99.0 2.3E-08 5.1E-13 103.4 19.9 137 91-256 138-295 (392)
80 PRK06065 acetyl-CoA acetyltran 99.0 1.5E-09 3.2E-14 112.1 10.7 105 37-148 14-120 (392)
81 cd00826 nondecarbox_cond_enzym 99.0 1.9E-09 4.1E-14 111.4 10.8 95 50-149 20-115 (393)
82 PLN02836 3-oxoacyl-[acyl-carri 99.0 4E-08 8.6E-13 103.1 20.3 179 53-257 93-335 (437)
83 PRK08439 3-oxoacyl-(acyl carri 99.0 3.7E-08 8.1E-13 102.4 19.8 163 3-172 2-242 (406)
84 PTZ00050 3-oxoacyl-acyl carrie 99.0 5E-08 1.1E-12 101.9 20.4 177 53-256 77-319 (421)
85 PRK06954 acetyl-CoA acetyltran 99.0 2.9E-09 6.2E-14 110.3 10.8 97 49-150 27-124 (397)
86 PRK06690 acetyl-CoA acetyltran 98.9 5E-08 1.1E-12 99.5 18.7 92 50-150 22-113 (361)
87 PF00108 Thiolase_N: Thiolase, 98.9 5.2E-09 1.1E-13 102.4 10.5 98 49-150 22-119 (264)
88 PRK06158 thiolase; Provisional 98.9 3.7E-09 8.1E-14 109.0 9.7 99 37-145 13-111 (384)
89 PRK07967 3-oxoacyl-(acyl carri 98.9 1.3E-07 2.9E-12 98.1 21.1 163 3-172 2-242 (406)
90 PRK07516 acetyl-CoA acetyltran 98.9 8E-09 1.7E-13 106.8 11.6 107 37-149 7-115 (389)
91 PRK06289 acetyl-CoA acetyltran 98.9 6.7E-09 1.5E-13 107.8 10.5 94 49-149 22-120 (403)
92 cd00832 CLF Chain-length facto 98.9 6.6E-08 1.4E-12 100.3 17.7 175 53-257 71-306 (399)
93 PLN02287 3-ketoacyl-CoA thiola 98.9 1.4E-08 3E-13 106.5 11.4 97 49-149 67-164 (452)
94 PLN02787 3-oxoacyl-[acyl-carri 98.9 2.2E-07 4.7E-12 99.4 20.6 227 3-257 129-441 (540)
95 PRK07661 acetyl-CoA acetyltran 98.8 1.7E-08 3.6E-13 104.3 11.0 97 50-150 24-121 (391)
96 PRK14691 3-oxoacyl-(acyl carri 98.8 3.2E-07 7E-12 93.0 19.6 177 53-257 4-242 (342)
97 PRK07851 acetyl-CoA acetyltran 98.8 3.3E-08 7.2E-13 102.6 11.0 96 50-150 24-121 (406)
98 PRK06157 acetyl-CoA acetyltran 98.7 4.7E-08 1E-12 101.3 10.9 107 37-149 12-118 (398)
99 PRK06519 3-oxoacyl-(acyl carri 98.7 4.1E-07 9E-12 94.1 17.8 219 2-257 5-315 (398)
100 PRK07910 3-oxoacyl-(acyl carri 98.7 7.1E-07 1.5E-11 93.1 19.4 176 54-257 84-322 (418)
101 PRK08963 fadI 3-ketoacyl-CoA t 98.7 5E-08 1.1E-12 102.0 10.3 98 49-150 25-122 (428)
102 PRK06366 acetyl-CoA acetyltran 98.7 8.4E-08 1.8E-12 99.1 10.9 97 50-150 23-119 (388)
103 PRK08131 acetyl-CoA acetyltran 98.7 1.1E-07 2.3E-12 98.6 11.1 97 50-150 23-120 (401)
104 PRK07850 acetyl-CoA acetyltran 98.7 1.4E-07 3E-12 97.4 11.0 97 50-150 23-120 (387)
105 PLN02644 acetyl-CoA C-acetyltr 98.6 1.6E-07 3.5E-12 97.3 11.3 97 50-150 22-118 (394)
106 PRK06365 acetyl-CoA acetyltran 98.6 1.3E-07 2.9E-12 98.8 10.5 107 37-148 21-128 (430)
107 TIGR02446 FadI fatty oxidation 98.6 1.1E-07 2.5E-12 99.2 9.9 97 50-150 28-124 (430)
108 PRK06633 acetyl-CoA acetyltran 98.6 1E-07 2.2E-12 98.3 9.5 97 50-150 24-120 (392)
109 PRK09050 beta-ketoadipyl CoA t 98.6 1.5E-07 3.3E-12 97.5 10.7 97 50-150 23-121 (401)
110 PRK13359 beta-ketoadipyl CoA t 98.6 1.9E-07 4E-12 96.7 11.2 98 50-151 23-122 (400)
111 PTZ00455 3-ketoacyl-CoA thiola 98.6 2.6E-07 5.7E-12 96.7 11.6 100 49-150 44-151 (438)
112 TIGR02430 pcaF beta-ketoadipyl 98.6 3.4E-07 7.3E-12 94.8 10.5 97 50-150 22-120 (400)
113 PRK06504 acetyl-CoA acetyltran 98.6 4.1E-07 8.8E-12 94.0 11.0 97 50-150 23-120 (390)
114 PRK08947 fadA 3-ketoacyl-CoA t 98.5 4.9E-07 1.1E-11 93.4 10.1 97 50-150 24-122 (387)
115 PRK08142 acetyl-CoA acetyltran 98.5 5.6E-07 1.2E-11 92.9 9.7 102 37-148 10-111 (388)
116 PRK09268 acetyl-CoA acetyltran 98.5 9.3E-07 2E-11 92.4 11.0 97 50-150 28-124 (427)
117 PRK07801 acetyl-CoA acetyltran 98.5 8.1E-07 1.8E-11 91.7 10.3 95 51-149 24-119 (382)
118 TIGR02445 fadA fatty oxidation 98.4 7.1E-07 1.5E-11 92.1 9.1 97 50-150 22-120 (385)
119 PF00109 ketoacyl-synt: Beta-k 98.4 1.9E-06 4E-11 83.5 10.4 114 53-172 87-251 (254)
120 PRK07855 lipid-transfer protei 98.4 1.6E-06 3.5E-11 89.5 10.0 100 37-146 9-108 (386)
121 PRK08257 acetyl-CoA acetyltran 98.3 2.9E-06 6.4E-11 90.3 11.2 107 37-149 9-119 (498)
122 TIGR02813 omega_3_PfaA polyket 98.3 2.9E-05 6.2E-10 95.9 20.9 140 92-257 185-351 (2582)
123 PF07451 SpoVAD: Stage V sporu 98.3 7.7E-05 1.7E-09 72.6 19.0 111 53-174 51-174 (329)
124 PRK06066 acetyl-CoA acetyltran 98.3 4.7E-06 1E-10 85.8 10.6 104 37-148 9-114 (385)
125 PRK06025 acetyl-CoA acetyltran 98.3 6.6E-06 1.4E-10 85.2 11.3 98 49-150 25-123 (417)
126 COG0304 FabB 3-oxoacyl-(acyl-c 98.2 2.3E-05 4.9E-10 81.1 14.0 182 52-260 70-315 (412)
127 PRK07937 lipid-transfer protei 98.0 2.8E-05 6.1E-10 79.2 9.8 103 37-148 7-112 (352)
128 KOG1406 Peroxisomal 3-ketoacyl 97.8 2.9E-05 6.3E-10 73.7 5.5 107 35-149 9-117 (408)
129 COG3321 Polyketide synthase mo 97.6 0.0022 4.9E-08 74.2 17.6 174 56-258 94-320 (1061)
130 KOG1394 3-oxoacyl-(acyl-carrie 97.3 0.0011 2.5E-08 65.7 9.0 179 52-259 93-339 (440)
131 COG0183 PaaJ Acetyl-CoA acetyl 97.3 0.001 2.3E-08 68.9 9.0 94 53-150 27-123 (392)
132 KOG1390 Acetyl-CoA acetyltrans 96.2 0.012 2.6E-07 57.8 6.9 96 50-149 27-122 (396)
133 PF13723 Ketoacyl-synt_2: Beta 95.9 0.1 2.2E-06 49.5 11.2 116 52-174 33-172 (218)
134 KOG1391 Acetyl-CoA acetyltrans 95.8 0.013 2.7E-07 55.9 4.9 98 50-152 25-124 (396)
135 KOG1392 Acetyl-CoA acetyltrans 95.1 0.016 3.5E-07 56.0 3.1 84 51-136 64-147 (465)
136 KOG1202 Animal-type fatty acid 94.8 0.57 1.2E-05 53.7 14.1 179 53-255 87-310 (2376)
137 PF08541 ACP_syn_III_C: 3-Oxoa 94.1 0.11 2.4E-06 41.8 5.3 72 65-146 1-77 (90)
138 PRK06025 acetyl-CoA acetyltran 94.0 0.14 3E-06 53.4 7.1 87 220-358 320-406 (417)
139 KOG1389 3-oxoacyl CoA thiolase 93.3 0.2 4.4E-06 49.2 6.3 95 50-149 58-153 (435)
140 PRK06147 3-oxoacyl-(acyl carri 92.1 0.5 1.1E-05 48.2 7.8 90 57-148 236-331 (348)
141 TIGR00748 HMG_CoA_syn_Arc hydr 91.8 0.68 1.5E-05 47.1 8.3 95 52-171 205-307 (345)
142 PRK05656 acetyl-CoA acetyltran 91.4 0.81 1.8E-05 47.5 8.6 27 235-261 305-331 (393)
143 PRK07850 acetyl-CoA acetyltran 90.9 1.5 3.3E-05 45.3 10.0 98 54-171 284-386 (387)
144 PRK06366 acetyl-CoA acetyltran 90.8 0.76 1.6E-05 47.6 7.7 114 19-145 253-372 (388)
145 cd00751 thiolase Thiolase are 90.4 1.4 3E-05 45.5 9.3 27 235-261 299-325 (386)
146 PRK13359 beta-ketoadipyl CoA t 90.3 1.4 3.1E-05 45.8 9.2 93 57-171 298-399 (400)
147 TIGR02430 pcaF beta-ketoadipyl 89.8 1.1 2.5E-05 46.5 7.9 41 57-102 298-338 (400)
148 PRK06205 acetyl-CoA acetyltran 89.8 1.1 2.4E-05 46.6 7.9 41 57-102 300-340 (404)
149 PF02803 Thiolase_C: Thiolase, 89.6 2 4.3E-05 37.0 7.9 96 56-171 23-123 (123)
150 PLN02287 3-ketoacyl-CoA thiola 89.3 1.9 4E-05 45.7 9.2 27 235-261 345-371 (452)
151 PRK06504 acetyl-CoA acetyltran 88.5 3.2 6.9E-05 43.1 10.1 27 235-261 302-328 (390)
152 PRK09050 beta-ketoadipyl CoA t 88.4 2.2 4.8E-05 44.4 8.9 41 57-102 299-339 (401)
153 PRK12578 acetyl-CoA acetyltran 87.9 4.2 9.1E-05 42.0 10.6 38 219-262 261-298 (385)
154 PRK09051 beta-ketothiolase; Pr 87.0 2.8 6.1E-05 43.5 8.6 41 57-102 294-334 (394)
155 PRK08963 fadI 3-ketoacyl-CoA t 86.5 4.2 9.1E-05 42.7 9.8 27 235-261 323-349 (428)
156 PRK07516 acetyl-CoA acetyltran 86.0 5.5 0.00012 41.2 10.2 38 219-262 264-301 (389)
157 PLN02326 3-oxoacyl-[acyl-carri 85.8 3.9 8.5E-05 42.1 9.0 79 57-145 282-365 (379)
158 PRK07204 3-oxoacyl-(acyl carri 85.6 3.3 7E-05 41.6 8.1 81 57-145 232-315 (329)
159 PRK12879 3-oxoacyl-(acyl carri 85.0 3.4 7.4E-05 41.3 8.0 79 57-145 227-310 (325)
160 CHL00203 fabH 3-oxoacyl-acyl-c 84.8 3.5 7.5E-05 41.4 7.9 82 57-145 228-311 (326)
161 PF02801 Ketoacyl-synt_C: Beta 84.5 1.2 2.7E-05 37.7 3.8 77 58-135 28-111 (119)
162 PRK06690 acetyl-CoA acetyltran 84.2 6.1 0.00013 40.5 9.4 95 55-171 258-359 (361)
163 PRK06816 3-oxoacyl-(acyl carri 84.2 6.6 0.00014 40.4 9.8 87 54-149 271-366 (378)
164 PRK08257 acetyl-CoA acetyltran 83.6 5 0.00011 43.0 8.8 37 220-262 297-333 (498)
165 PRK05963 3-oxoacyl-(acyl carri 82.9 4.5 9.9E-05 40.5 7.8 84 54-145 226-312 (326)
166 PF02801 Ketoacyl-synt_C: Beta 82.7 3.7 7.9E-05 34.8 6.1 37 218-260 28-64 (119)
167 PRK09258 3-oxoacyl-(acyl carri 82.5 5.8 0.00013 39.9 8.5 83 55-145 239-324 (338)
168 PRK06840 hypothetical protein; 82.3 6.1 0.00013 39.9 8.5 81 56-145 238-321 (339)
169 PRK06289 acetyl-CoA acetyltran 82.0 8.7 0.00019 39.9 9.7 38 220-263 281-318 (403)
170 PF02803 Thiolase_C: Thiolase, 81.3 6.7 0.00015 33.7 7.1 36 220-261 27-62 (123)
171 TIGR00747 fabH 3-oxoacyl-(acyl 81.2 6.8 0.00015 39.0 8.4 82 55-145 219-304 (318)
172 PTZ00455 3-ketoacyl-CoA thiola 81.1 13 0.00028 39.2 10.7 39 219-263 313-351 (438)
173 PRK06445 acetyl-CoA acetyltran 80.7 10 0.00022 39.3 9.7 95 57-171 294-393 (394)
174 cd00825 decarbox_cond_enzymes 80.5 7.9 0.00017 38.6 8.6 77 55-134 205-286 (332)
175 COG3425 PksG 3-hydroxy-3-methy 80.2 4.6 0.0001 41.3 6.6 97 52-170 206-307 (377)
176 PRK04262 hypothetical protein; 80.0 6.2 0.00013 40.1 7.7 83 53-145 207-294 (347)
177 PRK14691 3-oxoacyl-(acyl carri 79.8 4.8 0.0001 40.9 6.7 48 54-102 205-253 (342)
178 cd00830 KAS_III Ketoacyl-acyl 79.4 6 0.00013 39.3 7.3 84 55-146 223-309 (320)
179 PRK09268 acetyl-CoA acetyltran 78.3 12 0.00026 39.3 9.4 31 52-82 306-336 (427)
180 PRK09352 3-oxoacyl-(acyl carri 76.4 9.2 0.0002 38.0 7.6 81 57-145 221-304 (319)
181 TIGR01835 HMG-CoA-S_prok 3-hyd 76.0 7 0.00015 40.3 6.7 99 55-171 205-315 (379)
182 cd00826 nondecarbox_cond_enzym 75.4 7.7 0.00017 40.2 6.9 28 235-262 283-310 (393)
183 cd00327 cond_enzymes Condensin 74.2 17 0.00037 34.5 8.6 32 53-84 143-174 (254)
184 PRK07937 lipid-transfer protei 73.0 17 0.00037 37.1 8.6 77 18-102 212-289 (352)
185 PRK08242 acetyl-CoA acetyltran 71.1 15 0.00033 38.2 7.9 36 220-261 305-340 (402)
186 PRK08722 3-oxoacyl-(acyl carri 69.6 15 0.00033 38.4 7.5 46 56-102 279-325 (414)
187 PRK06365 acetyl-CoA acetyltran 69.1 61 0.0013 34.1 11.9 38 219-262 297-336 (430)
188 PLN02644 acetyl-CoA C-acetyltr 68.2 22 0.00048 36.9 8.3 27 235-261 305-331 (394)
189 PRK07910 3-oxoacyl-(acyl carri 68.0 15 0.00032 38.5 7.0 46 56-102 287-333 (418)
190 PRK06064 acetyl-CoA acetyltran 67.9 22 0.00047 36.7 8.2 41 57-102 260-300 (389)
191 COG0304 FabB 3-oxoacyl-(acyl-c 67.7 17 0.00037 38.0 7.3 75 57-133 278-356 (412)
192 PRK07515 3-oxoacyl-(acyl carri 67.5 25 0.00054 36.0 8.5 82 54-145 270-357 (372)
193 PRK05790 putative acyltransfer 67.4 26 0.00056 36.3 8.6 86 235-369 305-391 (393)
194 PRK06157 acetyl-CoA acetyltran 67.3 16 0.00035 37.9 7.1 41 57-102 268-310 (398)
195 PRK06954 acetyl-CoA acetyltran 66.6 21 0.00046 37.0 7.8 36 220-261 300-335 (397)
196 PRK05952 3-oxoacyl-(acyl carri 66.5 15 0.00033 37.9 6.7 46 55-101 254-300 (381)
197 TIGR01930 AcCoA-C-Actrans acet 66.0 19 0.00041 37.2 7.3 27 235-261 300-326 (386)
198 cd00834 KAS_I_II Beta-ketoacyl 65.6 17 0.00038 37.3 7.0 80 55-136 275-360 (406)
199 PRK07801 acetyl-CoA acetyltran 65.2 28 0.00061 35.9 8.4 85 235-368 294-379 (382)
200 COG0332 FabH 3-oxoacyl-[acyl-c 65.0 14 0.0003 37.3 5.8 86 52-145 220-308 (323)
201 PLN02787 3-oxoacyl-[acyl-carri 64.6 15 0.00033 39.8 6.5 45 57-102 407-452 (540)
202 KOG1389 3-oxoacyl CoA thiolase 64.2 19 0.00042 35.8 6.4 27 235-261 334-360 (435)
203 cd00832 CLF Chain-length facto 63.9 22 0.00048 36.9 7.4 48 54-102 269-317 (399)
204 PRK06066 acetyl-CoA acetyltran 63.1 9.2 0.0002 39.6 4.3 77 18-102 218-300 (385)
205 TIGR03150 fabF beta-ketoacyl-a 62.9 13 0.00028 38.3 5.5 45 57-102 277-322 (407)
206 PRK09185 3-oxoacyl-(acyl carri 62.9 20 0.00044 37.0 6.8 45 57-102 262-307 (392)
207 cd00829 SCP-x_thiolase Thiolas 62.1 37 0.00079 34.7 8.6 44 54-102 250-293 (375)
208 PRK08142 acetyl-CoA acetyltran 61.8 11 0.00024 39.1 4.6 79 18-102 218-297 (388)
209 PRK09052 acetyl-CoA acetyltran 61.1 40 0.00086 35.1 8.6 27 235-261 311-337 (399)
210 PRK07314 3-oxoacyl-(acyl carri 60.3 18 0.00039 37.5 5.9 45 57-102 278-323 (411)
211 PRK07661 acetyl-CoA acetyltran 60.0 33 0.00071 35.6 7.8 37 219-261 293-329 (391)
212 cd00828 elong_cond_enzymes "el 59.5 27 0.00058 36.1 7.1 47 55-102 274-321 (407)
213 PRK06158 thiolase; Provisional 59.4 13 0.00028 38.4 4.6 43 55-102 254-296 (384)
214 PRK09116 3-oxoacyl-(acyl carri 58.9 28 0.00062 36.2 7.1 45 56-101 276-321 (405)
215 PRK06333 3-oxoacyl-(acyl carri 58.8 25 0.00054 36.7 6.7 46 55-101 288-334 (424)
216 PRK06519 3-oxoacyl-(acyl carri 58.1 31 0.00066 35.9 7.1 45 56-102 281-326 (398)
217 PRK08235 acetyl-CoA acetyltran 56.3 43 0.00092 34.8 7.9 36 220-261 296-331 (393)
218 PTZ00050 3-oxoacyl-acyl carrie 56.1 39 0.00084 35.3 7.6 47 55-102 283-331 (421)
219 PRK08313 acetyl-CoA acetyltran 53.7 22 0.00047 36.8 5.2 79 18-102 216-299 (386)
220 PRK07855 lipid-transfer protei 53.5 19 0.00041 37.3 4.7 41 57-102 268-308 (386)
221 smart00825 PKS_KS Beta-ketoacy 52.6 56 0.0012 33.9 8.2 48 54-102 278-326 (424)
222 PLN02836 3-oxoacyl-[acyl-carri 52.0 46 0.00099 35.0 7.4 47 55-102 299-346 (437)
223 PRK09604 UGMP family protein; 51.8 53 0.0012 33.2 7.6 30 53-82 51-80 (332)
224 TIGR02445 fadA fatty oxidation 51.3 76 0.0016 32.8 8.7 27 235-261 294-320 (385)
225 PRK07851 acetyl-CoA acetyltran 50.9 57 0.0012 34.0 7.8 36 220-261 308-343 (406)
226 PLN03172 chalcone synthase fam 50.7 85 0.0018 32.6 9.0 30 232-261 115-148 (393)
227 PRK08256 lipid-transfer protei 49.0 47 0.001 34.3 6.8 41 57-102 266-306 (391)
228 cd00831 CHS_like Chalcone and 49.0 50 0.0011 33.5 7.0 82 55-145 259-349 (361)
229 PRK06065 acetyl-CoA acetyltran 48.0 33 0.00072 35.6 5.5 63 18-82 224-291 (392)
230 PLN03168 chalcone synthase; Pr 47.5 91 0.002 32.3 8.6 17 232-248 114-130 (389)
231 PLN03173 chalcone synthase; Pr 46.7 1E+02 0.0022 31.9 8.9 17 232-248 115-131 (391)
232 PRK06059 lipid-transfer protei 45.8 1.1E+02 0.0024 31.7 9.0 38 219-262 277-314 (399)
233 PRK06501 3-oxoacyl-(acyl carri 44.9 33 0.00071 35.9 4.9 45 57-102 291-336 (425)
234 cd00833 PKS polyketide synthas 44.2 72 0.0016 32.9 7.4 48 54-102 278-326 (421)
235 cd00827 init_cond_enzymes "ini 43.1 80 0.0017 31.2 7.3 87 53-146 221-313 (324)
236 PRK07108 acetyl-CoA acetyltran 43.0 59 0.0013 33.7 6.4 27 235-261 304-330 (392)
237 KOG1394 3-oxoacyl-(acyl-carrie 42.6 30 0.00066 35.2 3.9 83 18-102 261-348 (440)
238 PF00195 Chal_sti_synt_N: Chal 42.5 96 0.0021 29.6 7.2 34 323-357 156-189 (226)
239 PF07736 CM_1: Chorismate muta 40.6 35 0.00075 29.1 3.4 50 59-115 24-76 (118)
240 cd02185 AroH Chorismate mutase 40.0 48 0.001 28.2 4.1 51 61-115 26-76 (117)
241 PRK08947 fadA 3-ketoacyl-CoA t 39.9 1.5E+02 0.0032 30.7 8.7 27 235-261 296-322 (387)
242 TIGR00329 gcp_kae1 metallohydr 39.2 1.1E+02 0.0023 30.6 7.4 59 54-114 49-107 (305)
243 PRK06633 acetyl-CoA acetyltran 38.9 1.1E+02 0.0024 31.7 7.7 18 235-252 304-321 (392)
244 PF08392 FAE1_CUT1_RppA: FAE1/ 38.4 1.4E+02 0.0029 29.7 7.7 38 218-261 88-129 (290)
245 PF01135 PCMT: Protein-L-isoas 37.8 34 0.00074 32.2 3.4 70 297-367 19-91 (209)
246 PLN02377 3-ketoacyl-CoA syntha 36.9 1.8E+02 0.0038 31.4 8.9 30 232-261 185-218 (502)
247 TIGR03723 bact_gcp putative gl 34.8 1.3E+02 0.0029 30.1 7.3 31 53-83 49-79 (314)
248 TIGR01796 CM_mono_aroH monofun 33.6 64 0.0014 27.4 3.9 50 61-115 26-76 (117)
249 KOG1406 Peroxisomal 3-ketoacyl 33.5 51 0.0011 32.2 3.7 31 54-84 271-301 (408)
250 PLN00415 3-ketoacyl-CoA syntha 33.0 1.6E+02 0.0035 31.3 7.7 28 234-261 149-180 (466)
251 cd01458 vWA_ku Ku70/Ku80 N-ter 32.8 2.8E+02 0.0061 25.7 8.9 97 51-148 23-137 (218)
252 PLN02932 3-ketoacyl-CoA syntha 32.2 2.2E+02 0.0048 30.4 8.7 30 232-261 161-194 (478)
253 PLN03170 chalcone synthase; Pr 31.3 2.1E+02 0.0046 29.7 8.3 30 232-261 119-152 (401)
254 PRK12880 3-oxoacyl-(acyl carri 31.2 1.7E+02 0.0037 29.7 7.5 43 55-102 242-284 (353)
255 PLN02192 3-ketoacyl-CoA syntha 31.1 2.5E+02 0.0054 30.3 8.9 29 233-261 190-222 (511)
256 TIGR02446 FadI fatty oxidation 30.3 2.3E+02 0.0049 29.8 8.4 27 235-261 325-351 (430)
257 PLN02854 3-ketoacyl-CoA syntha 30.2 3.2E+02 0.0069 29.6 9.5 29 233-261 202-234 (521)
258 PRK14878 UGMP family protein; 28.8 1.9E+02 0.0041 29.1 7.2 26 57-82 48-73 (323)
259 PRK08304 stage V sporulation p 28.8 3.5E+02 0.0075 27.5 8.9 82 63-149 216-312 (337)
260 PRK07103 polyketide beta-ketoa 28.2 1.2E+02 0.0026 31.5 6.0 28 58-85 284-312 (410)
261 KOG1390 Acetyl-CoA acetyltrans 28.2 1.2E+02 0.0026 30.5 5.4 82 235-365 308-391 (396)
262 PRK08131 acetyl-CoA acetyltran 27.1 2.5E+02 0.0053 29.2 7.9 27 235-261 310-336 (401)
263 PF05378 Hydant_A_N: Hydantoin 26.9 67 0.0015 29.3 3.3 38 47-84 29-66 (176)
264 COG1214 Inactive homolog of me 26.2 1.3E+02 0.0028 28.5 5.2 60 49-114 33-96 (220)
265 TIGR03722 arch_KAE1 universal 25.5 1.9E+02 0.0041 29.0 6.6 25 58-82 50-74 (322)
266 TIGR02813 omega_3_PfaA polyket 24.9 1.5E+02 0.0033 38.5 6.9 79 57-136 317-403 (2582)
267 KOG2708 Predicted metalloprote 24.9 99 0.0022 29.6 4.0 61 55-119 51-112 (336)
268 PLN03171 chalcone synthase-lik 24.3 4.1E+02 0.0088 27.6 9.0 16 232-247 121-136 (399)
269 cd01452 VWA_26S_proteasome_sub 22.5 2.3E+02 0.005 26.1 6.0 86 52-148 24-118 (187)
270 TIGR03725 bact_YeaZ universal 22.1 1.2E+02 0.0026 28.2 4.1 33 51-83 31-63 (202)
271 PF00814 Peptidase_M22: Glycop 21.5 86 0.0019 30.6 3.1 29 54-82 30-58 (268)
272 cd01461 vWA_interalpha_trypsin 20.6 3.9E+02 0.0084 23.1 7.0 87 54-149 20-110 (171)
273 cd01453 vWA_transcription_fact 20.3 4.7E+02 0.01 23.7 7.6 89 52-148 24-117 (183)
274 PF02887 PK_C: Pyruvate kinase 20.2 5E+02 0.011 21.4 9.1 73 74-148 16-103 (117)
No 1
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=100.00 E-value=8.3e-105 Score=766.91 Aligned_cols=444 Identities=59% Similarity=0.967 Sum_probs=414.3
Q ss_pred CceeEEeEEEEecCCceechHHHHHhcCCChhhhhhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEE
Q 012353 2 AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVG 81 (465)
Q Consensus 2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~ 81 (465)
|.+|||.+|.+|+|.++|+|+||+++.|++.+||++|+||.+|+||.+.||+.+|+.+++++++++.+|+++.|++|.||
T Consensus 9 p~dvGI~aieiyfP~~yV~Q~elEk~d~vs~gKytIGLGq~~MgfcsdrEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVG 88 (462)
T KOG1393|consen 9 PKDVGIIAIEIYFPSQYVDQEELEKFDGVSAGKYTIGLGQTQMGFCSDREDIISLSLTVVSRLMERYNIDPDSIGRLEVG 88 (462)
T ss_pred ccccceeEEEEEcCccccChhhHhhcCCccccceEeccCcceecccCchhhhhhhhHHHHHHHHHHhCCChhhcceEEec
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccccCCCCCcccc
Q 012353 82 SETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGG 161 (465)
Q Consensus 82 T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~G 161 (465)
|||-+|.+||+.+.|+++|+.+||.+++++|..||||||++||.+|.+||+++.||||.+|||++|++.|..+++|||+|
T Consensus 89 TETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDIAvY~~G~aRpTGG 168 (462)
T KOG1393|consen 89 TETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIAVYAKGNARPTGG 168 (462)
T ss_pred ceeccccchHHHHHHHHHhhhcCCCccccccccccccccHHHHHHHhhhhhhcccCCceeEEEEeeEEEecCCCCCCCCC
Confidence 99999999999999999999888999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeecCCCCcccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhh--hcCCCCCC
Q 012353 162 AAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL--EGKQFSLS 239 (465)
Q Consensus 162 dGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~--~~~~~~~~ 239 (465)
+|||||||+|++++.|+++++++||+|+||||+|+..++||+|||++|++||+.+++.||..|++++... ...+..++
T Consensus 169 AgAVAmLIgPnApi~ferglr~thM~hayDFyKPdl~SEyPvVDGklSi~cYl~Ald~cY~~~~kK~~~~~~~~~~~~l~ 248 (462)
T KOG1393|consen 169 AGAVAMLIGPNAPIIFERGLRATHMQHAYDFYKPDLLSEYPVVDGKLSIQCYLSALDRCYTVYRKKIAAQWQKSGSDNLN 248 (462)
T ss_pred cceEEEEEcCCCceEecccchhhhhhhhhhccCCCCCCcCceecCeehHHHHHHHHHHHHHHHHHHHHHHhccccCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999998653 22245578
Q ss_pred CCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcc
Q 012353 240 NADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTL 319 (465)
Q Consensus 240 did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~ 319 (465)
+||+++||.|++||++|.+++|+|+||..++....+.. .+ ...+..+++|+||++||++++++++.|.+|++||+.
T Consensus 249 ~fdy~ifHsP~cKlvqKs~arl~ynDf~~~~~~~~~~~--~~--~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~ 324 (462)
T KOG1393|consen 249 SFDYIIFHSPYCKLVQKSLARLLYNDFLLNPSQLPESA--GL--ESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLL 324 (462)
T ss_pred cCCeEEEeCchhhhHHHHHHHhhhhhhhhccccccccc--cc--cccccccccccchHHHHHHHHHhHHHHHhhccceeE
Confidence 99999999999999999999999999987665432211 11 147888999999999999999999999999999999
Q ss_pred cccccCccchhhHHHHHHHHHHhcC-CCCCCCEEEEEEeccchheeeeEEEEeCCCCCCchhhHHhhccHHHHhccCCcC
Q 012353 320 IPKQVGNMYTASLYAALASLIHNKH-SELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEF 398 (465)
Q Consensus 320 ~~~~~GN~~taS~~l~L~~ll~~~~-~~~~G~rill~syGsG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~R~~l 398 (465)
+++++|||||+|+|.+|+++|...+ ....|+||++||||||+++++|++++..+.++ ..+.+++..++.+||++|+++
T Consensus 325 ~~~~~GNmYTaSly~~l~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~p-~~k~~~~~~d~~~rL~~R~~~ 403 (462)
T KOG1393|consen 325 APRRNGNMYTASLYASLASLLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDATP-LDKIIASLTDLKKRLDSRKCV 403 (462)
T ss_pred eeccCCccccHHHHHHHHHHHhccchhhhhccEEEEEeecCcchhheEEEEecCCCCc-hhhhhHhhhhHHHHhhhcccc
Confidence 9999999999999999999999732 23689999999999999999999999875444 233456678999999999999
Q ss_pred CHHHHHHHHHHHHHhcCCCCcccCCCCCCCCCCcEEEEeeCCCceeEeeecc
Q 012353 399 PPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 450 (465)
Q Consensus 399 ~~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~v~~~~~R~Y~~~~ 450 (465)
+|++|++.|++||+.|++.+|.|.+++++|+||||||++||++|||.|.++|
T Consensus 404 tPe~F~e~melre~~~~~~n~~p~gs~~~Lf~gtyYL~~vd~~~RRsY~~~~ 455 (462)
T KOG1393|consen 404 TPEEFTEIMELREDTHHKVNFVPQGSIESLFPGTYYLKRVDELHRRSYTLKP 455 (462)
T ss_pred CHHHHHHHHHhhhhhcccccCCCCCchhhcCCCceehhhhhHHhhhccccCC
Confidence 9999999999999999999999999999999999999999999999999998
No 2
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=3e-100 Score=787.19 Aligned_cols=459 Identities=85% Similarity=1.326 Sum_probs=420.8
Q ss_pred CCceeEEeEEEEecCCceechHHHHHhcCCChhhhhhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 012353 1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV 80 (465)
Q Consensus 1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 80 (465)
||++|||.++++|+|+++|++++|++.+|.+++|+++||++|+|++++++||+++||++||+++|+++|++|++||+||+
T Consensus 1 ~~~~vgI~gig~Y~P~~~v~n~eLa~~~g~~~~~~~~GI~~r~~ava~~~Ed~~tmA~~AA~~aL~~agid~~~Idlliv 80 (459)
T PLN02577 1 MPKNVGILAMEVYFPPTCVQQEALEAHDGVSKGKYTIGLGQDCMAFCTDVEDVISMSLTVVKSLLEKYNIDPKQIGRLEV 80 (459)
T ss_pred CCCccEEEEEEEeCCCeEEcHHHHHHHhCCCHHHHhhccceeEeccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccccCCCCCccc
Q 012353 81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTG 160 (465)
Q Consensus 81 ~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~ 160 (465)
+|+|+++.+|++|++|+++++++|++++.+||+++||+||++||++|.+||+++.+|+++||||++|+++|..++.++|+
T Consensus 81 aTeT~~d~~ps~A~~v~~ll~~LG~~~~~afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~~~~~e~t~ 160 (459)
T PLN02577 81 GSETVIDKSKSIKTFLMQLFEESGNTDIEGVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVYAEGPARPTG 160 (459)
T ss_pred EcCCCCCCCCchHHHHHHHHHHhCCCCcEEeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhccCCCCCCCC
Confidence 99999999999999998777666678999999999999999999999999999977789999999999999877789999
Q ss_pred ccceeeeeecCCCCcccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 012353 161 GAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240 (465)
Q Consensus 161 GdGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~d 240 (465)
||||+||||++++++.++....++++.+++|||||.+.++||.|||++|+++|++++++|+++++++.....+.+++++|
T Consensus 161 GdGA~A~lv~~~~~~~l~~~~~g~~~~~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~~~d 240 (459)
T PLN02577 161 GAGAVAMLVGPNAPIVFESKYRGSHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFSISD 240 (459)
T ss_pred CcceEEEEEccCCCceeecccccccCcccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCCCHHH
Confidence 99999999999887777766788999999999999987889999999999999999999999999987544445788999
Q ss_pred CceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccc
Q 012353 241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLI 320 (465)
Q Consensus 241 id~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~ 320 (465)
||++||||||+||++|++++|+|+||.++...+++..++.+.++..++.++.|.||++||++..++++.|.+||+||+.+
T Consensus 241 ~d~~vfHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~ 320 (459)
T PLN02577 241 ADYFVFHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLI 320 (459)
T ss_pred cCEEEecCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHH
Confidence 99999999999999999999999988754321122234556667788899999999999999999999999999999999
Q ss_pred ccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEeCCCCCCchhhHHhhccHHHHhccCCcCCH
Q 012353 321 PKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEFPP 400 (465)
Q Consensus 321 ~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~R~~l~~ 400 (465)
++++|||||||+|++|+++|++....++|+||+|||||||+.+++|+++++++..++.+++++.+.+++++|++|++||+
T Consensus 321 ~~~vGN~YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~~~~~~~~~~~~~~~~~~~~L~~R~~ls~ 400 (459)
T PLN02577 321 PKQVGNMYTASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHEGQHPFSLSNIAKVMDVSEKLKSRHEVSP 400 (459)
T ss_pred HHhcCcccchHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeCCCccccHHHHHHhccHHHHHhCCccCCH
Confidence 99999999999999999999874335699999999999999999999999995444446788888899999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCcccCCCCCCCCCCcEEEEeeCCCceeEeeeccCCccccCCCCCCCCC
Q 012353 401 ENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKPADVTNCENGSLANGH 465 (465)
Q Consensus 401 ~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~v~~~~~R~Y~~~~~~~~~~~~~~~~~~~ 465 (465)
+||+++++.|+..++..+|.|..+.+.++||+|||++|+++|||+|++++ +||+++|||
T Consensus 401 ~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~i~~~~~R~Y~~~~------~~~~~~~~~ 459 (459)
T PLN02577 401 EKFVETLKLMEHRYGAKDFVPSKDVSLLAPGTYYLTEVDSLYRRFYDRKA------LNGSIANGH 459 (459)
T ss_pred HHHHHHHHHHHhhccCcCCCcCCcccccCCCceEEeEEcCCcEEEEEecC------CCCccCCCC
Confidence 99999999999999999999999988899999999999999999999987 789999987
No 3
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=100.00 E-value=5.5e-96 Score=754.53 Aligned_cols=446 Identities=61% Similarity=0.990 Sum_probs=406.5
Q ss_pred eeEEeEEEEecCCceechHHHHHhcCCChhhhhhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEee
Q 012353 4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSE 83 (465)
Q Consensus 4 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~ 83 (465)
+|||.+|++|+|+.+|++++|++.+|++++||++||++|+|+|++++||+++||++||+++|++++++|++||+||++|+
T Consensus 1 ~vgI~~ig~y~P~~~v~~~eLa~~~g~~~~k~~~GI~~rr~av~~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~Te 80 (454)
T TIGR01833 1 DVGILALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTE 80 (454)
T ss_pred CcEEEEEEEeCCCeEEcHHHHHHhcCCCHHHheechhheecccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccccCCCCCcccccc
Q 012353 84 TVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAA 163 (465)
Q Consensus 84 s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdG 163 (465)
|+++.+|+++++|+++||++|+++|++||+++||+|+++||++|.+||+++.+|+++||||++|++.|.+.+.++|+|||
T Consensus 81 S~~d~sps~a~~v~~lL~~lG~~~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDia~y~~~~~~~t~GaG 160 (454)
T TIGR01833 81 TIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYAKGNARPTGGAG 160 (454)
T ss_pred CCCCCCCchHHHHHHHHHhcCCCCceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEeccccccCCCeeeccccc
Confidence 99999999999999999877778999999999999999999999999999987889999999999999888889999999
Q ss_pred eeeeeecCCCCcccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhh-h----cCCCCC
Q 012353 164 AVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL-E----GKQFSL 238 (465)
Q Consensus 164 A~A~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~-~----~~~~~~ 238 (465)
|+||||+++|++.++++..++|+.+++|||||...++||.|||++|+.||++++++||..|+++.... . +.+..+
T Consensus 161 AvAmLv~~~~~~~~~~~~~~~~~~~~~DF~rP~~~~~~p~vdg~~S~~~Yl~a~~~~y~~y~~~~~~a~~~~~~~~~~~~ 240 (454)
T TIGR01833 161 AVAMLIGPNAPIVFERGLRGSHMQHAYDFYKPDLASEYPVVDGKLSIQCYLSALDRCYKSYCKKIEKQWGKSGGDRKFTL 240 (454)
T ss_pred eEEEEeccCccceecCccceEEEeecccccCCCCCCcccccCCccCHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCH
Confidence 99999999998778876688999999999999976779999999999999999999999998886431 1 125778
Q ss_pred CCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCc
Q 012353 239 SNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPST 318 (465)
Q Consensus 239 ~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~ 318 (465)
+|||++|||+||+||++|++++++++++...+..+.+..|+.+.++..++.+++|+||+++|.+.+++++.|.+||+||+
T Consensus 241 ~dfd~~~fH~P~~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~ 320 (454)
T TIGR01833 241 NDFDYMVFHSPYCKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSL 320 (454)
T ss_pred hHcCEEeccCCcccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchh
Confidence 99999999999999999999999988887544222223366677778899999999999999999999999999999999
Q ss_pred ccccccCccchhhHHHHHHHHHHhcCC-CCCCCEEEEEEeccchheeeeEEEEeCCCCCC-c-hhhHHhhccHHHHhccC
Q 012353 319 LIPKQVGNMYTASLYAALASLIHNKHS-ELDGKRVVLFSYGSGLTATMFSLKLSEGHHPF-S-LSNILSVMNVAGKLKSR 395 (465)
Q Consensus 319 ~~~~~~GN~~taS~~l~L~~ll~~~~~-~~~G~rill~syGsG~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~L~~R 395 (465)
.+++++|||||||+|++|+++|++... .+.|+||+|||||||+++++|+++++++..++ . ++......++.++|++|
T Consensus 321 ~~~~~vGN~YtaSlyl~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~~~~~~~~~~~~~~~~~~~~~~~L~~R 400 (454)
T TIGR01833 321 LVPNQVGNMYTASLYGCLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVSQDASPGSALDKLIASLSDLKNKLDSR 400 (454)
T ss_pred HHHHhcCchhhhHHHHHHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEEEeCCccccchHHHHHHHHhhHHHHHhcC
Confidence 999999999999999999999987432 56899999999999999999999999943321 1 44555556899999999
Q ss_pred CcCCHHHHHHHHHHHHHhcCCCCcccCCCCCCCCCCcEEEEeeCCCceeEeeec
Q 012353 396 HEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKK 449 (465)
Q Consensus 396 ~~l~~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~v~~~~~R~Y~~~ 449 (465)
+++|++||+++++.|++.|+..+|.|.++.+.++||+|||++||++|||+|++|
T Consensus 401 ~~~s~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~i~~~~~R~Y~~~ 454 (454)
T TIGR01833 401 HCVAPEEFEETMELREQAHHKKNFTPQGSIDLLFPGTWYLERVDSKHRRSYARK 454 (454)
T ss_pred ccCCHHHHHHHHHhhhhhcccccccccccccccCCCcEEEeeecCCceEEeccC
Confidence 999999999999999999999999999999899999999999999999999986
No 4
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=3.6e-82 Score=624.24 Aligned_cols=375 Identities=34% Similarity=0.527 Sum_probs=349.2
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcCCChhhhhhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEe
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T 82 (465)
|+|||.++++|+|.++|+++||++.+|.+++|+++|+++..|+|++.+||++|||++||+++|+++++||++|++|+|||
T Consensus 1 ~~iGI~~~g~y~p~~~i~~~ela~~~g~d~~k~~~gl~~~e~sv~~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgT 80 (377)
T COG3425 1 MMIGIVGIGAYIPRYRIKLEELARAWGVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARNALKRADIDPSKIGAVIVGS 80 (377)
T ss_pred CccccceEEEeccceEeeHHHHHhhcCCChHHhhhccccccccCCCCchhHHHHHHHHHHHHHhccCCCHHHCceEEEec
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccccCC-CCCcccc
Q 012353 83 ETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEG-PARPTGG 161 (465)
Q Consensus 83 ~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~-~~~~t~G 161 (465)
||++|.+|++|++|++.||+ +++++++|+++||++||+||++|.+||.+|.+ +++|||++|++.|.++ ..|+|+|
T Consensus 81 ES~~d~~K~~at~v~~~lg~--~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~--~~~LvI~sD~a~~~~~~~~E~t~G 156 (377)
T COG3425 81 ESGPDAVKPTATIVAEALGL--NPSARAADVEFACYAGTAALQAAIGWVESGMI--SYGLVIGADTAQYAPGDALEYTAG 156 (377)
T ss_pred CCCcccccchHHHHHHHhCC--CCceehhhHHHHHHHHHHHHHHHHHHHHcCCc--cceEEEeehhhccCCCcccCccCC
Confidence 99999999999999999999 89999999999999999999999999999977 8999999999999887 6799999
Q ss_pred cceeeeeecCCCCcccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCC
Q 012353 162 AAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNA 241 (465)
Q Consensus 162 dGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~di 241 (465)
+|||||||++++++..+....++|+.|++|||||.+. .||.++|++|..+|++++..+++.|+++. +++++||
T Consensus 157 AGavA~lIg~n~~~~a~~~~~~syt~d~~DFwRp~~~-~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~------gls~~df 229 (377)
T COG3425 157 AGAVAFLIGKNPPIVAEFEGTGSYTTDTPDFWRPDGQ-PYPYVDGRFSEPAYFKHVENAAKGYMEKT------GLSPDDF 229 (377)
T ss_pred CceEEEEEccCCCeEEEecCceEEecCCCcccccCCC-cccccCceecHHHHHHHHHHHHHHHHHHh------CCChhhh
Confidence 9999999999977766666889999999999999955 89999999999999999999999999998 7889999
Q ss_pred ceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccc
Q 012353 242 DYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIP 321 (465)
Q Consensus 242 d~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~ 321 (465)
|++|||+||+||++|+++.|++ + .++|+||+.++
T Consensus 230 dy~vfH~P~~k~~~ka~k~l~~------------------------~----------------------~e~v~~~l~~~ 263 (377)
T COG3425 230 DYIVFHQPNGKFPKKAAKSLGF------------------------K----------------------EEQVKPGLVYP 263 (377)
T ss_pred CeEEecCCCCchHHHHHHHhCc------------------------c----------------------HhhcCccchhh
Confidence 9999999999999999998842 1 26889999999
Q ss_pred cccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEeCCCCCCchhhHHhhccHHHHhccCCcCCHH
Q 012353 322 KQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEFPPE 401 (465)
Q Consensus 322 ~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~R~~l~~~ 401 (465)
+++||+||||+|++|+++|+++ . ++|+||+++|||||+.+++|++++++ +++++++...+..+|.+|+++|+.
T Consensus 264 ~~vGN~YtgS~~L~Las~L~~a-~-~~G~rIl~~SYGSGa~s~~fs~~v~~-----~~~~~~~~~~~~~~l~~R~~ls~~ 336 (377)
T COG3425 264 QRIGNTYTGSLLLGLASLLDNA-K-LPGDRILLFSYGSGAGSEAFSITVTD-----GIEERRKKLAPTVLLEQRNRLSYI 336 (377)
T ss_pred hhcCcccchhHHHHHHHHHhhc-C-CCCCEEEEEeeCCCcceeEEEEEecc-----cHHHHhhhcchHHHHHhhccCCHH
Confidence 9999999999999999999994 3 79999999999999999999999999 899999899999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcccCCCCCCCCCCcEEEEeeCCCceeEeee
Q 012353 402 NFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAK 448 (465)
Q Consensus 402 ey~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~v~~~~~R~Y~~ 448 (465)
+|+.+++.|.+.....++.+ ...+.|||..|+++ .|.|.+
T Consensus 337 dYe~~~~~~~~~~~~~~~~~------~~~~~~~l~~i~~~-~R~y~~ 376 (377)
T COG3425 337 DYELYFKRRKKIRLGKDNEF------YDSGDYYLEEIDDH-FRRYRY 376 (377)
T ss_pred HHHHHHhhhccccccccccc------ccCCceEEeeccCC-ceeEee
Confidence 99999998777665555544 45688999999995 556643
No 5
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=2.6e-71 Score=567.99 Aligned_cols=377 Identities=29% Similarity=0.449 Sum_probs=331.1
Q ss_pred eEEeEEEEecCCceechHHHHHhcCCChhhhhhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeec
Q 012353 5 VGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSET 84 (465)
Q Consensus 5 vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s 84 (465)
|||.+|++|+|+++|++++|++.+|++++|+..|+|++++++++++||+++|+++|++++|+++ ++++||+|+++|+|
T Consensus 1 iGI~~i~~y~P~~~v~~~ela~~~g~~~~~~~~g~G~~~~~~~~~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s 78 (379)
T TIGR01835 1 IGIDKISFFTPQNYLDMTALAEARGVDPEKFHIGIGQKKMAVPPIDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTES 78 (379)
T ss_pred CCEeEEEEECCCEEeeHHHHHHHhCCCHHHHHhhcCceEEeeCCCCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCC
Confidence 7999999999999999999999999999999999999999999999999999999999999998 89999999999999
Q ss_pred CCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccccCC-CCCcccccc
Q 012353 85 VIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEG-PARPTGGAA 163 (465)
Q Consensus 85 ~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~-~~~~t~GdG 163 (465)
+++.+|+++.+|+++||+ .++++++|++++|+||+.||++|.+||++|.+ ++||||++|+++|... +.++|||||
T Consensus 79 ~~~~~~s~a~~v~~~Lgl--~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~~--~~aLVv~~D~a~~~~~~~~~~~~GdG 154 (379)
T TIGR01835 79 GIDQSKAAAVYVHGLLGL--QPFCRSFELKQACYGATAALQMAKGHVALSPD--RKVLVIASDIAKYGLESPGEPTQGAG 154 (379)
T ss_pred CCCCCCCHHHHHHHHhCC--CCCceEEEeccccHHHHHHHHHHHHHHHcCCC--CeEEEEEeehhhcccCCCCCccccCc
Confidence 999999999999999998 56799999999999999999999999999954 9999999999988653 568999999
Q ss_pred eeeeeecCCCCc-ccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 012353 164 AVVMLVGPDAPV-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD 242 (465)
Q Consensus 164 A~A~Ll~~~~~~-~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did 242 (465)
|+||||++++++ .++. ..+.++.+.+|||+|.+ ..+|.++|++++.+|++.+++++++++++. +++++|||
T Consensus 155 A~A~Ll~~~~~i~~~~~-~~~~~t~~~~df~~p~~-~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~------g~~~~did 226 (379)
T TIGR01835 155 AVAMLVSADPKLLAINE-DSVLYTDDIMDFWRPNY-STTALVDGQYSNEQYLNAFENAWNDYAKRT------GLSLADFA 226 (379)
T ss_pred cEEEEEecCCCeeEEec-cceeeecCCCCccCCCC-CCceeECcHHHHHHHHHHHHHHHHHHHHHh------CCCHHHcC
Confidence 999999998764 3433 23467788899999984 668999999999999999999999999887 78999999
Q ss_pred eeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccccc
Q 012353 243 YFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPK 322 (465)
Q Consensus 243 ~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~ 322 (465)
+++|||||.+|+.+++++++ +.+ +++. .+.+.+.+++|+.+.+
T Consensus 227 ~~i~H~p~~~~~~k~~~~~l-~~~-------------------~~~~-----------------~~~~~~~~~~s~~~~~ 269 (379)
T TIGR01835 227 AFCFHVPFTKMGLKALRHIL-KKN-------------------YEDE-----------------DESVQNAYLESIIYNR 269 (379)
T ss_pred EEEECCCCCcHHHHHHHHHH-hhc-------------------cccc-----------------HHHHHHHhhhhhhhhh
Confidence 99999999999999988873 110 2221 1223445567888889
Q ss_pred ccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEeCCCCCCchhhHHhhccHHHHhccCCcCCHHH
Q 012353 323 QVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEFPPEN 402 (465)
Q Consensus 323 ~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~R~~l~~~e 402 (465)
++|||||||+|++|.+++++.+++++||+|+|+|||||+++++|++++++ ++++...+.++.++|++|+.+++++
T Consensus 270 ~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~~~~~~~-----~~~~~~~~~~~~~~l~~r~~~~~~~ 344 (379)
T TIGR01835 270 EVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFFSGTLVA-----GYRDHLKKERHLALLKNRTNLSYAE 344 (379)
T ss_pred hcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeEEEEEcc-----cHHHHHhcccHHHHHhCCccCCHHH
Confidence 99999999999999999998326789999999999999999999999998 7988888889999999999999999
Q ss_pred HHHHHHHHHHhcCCCCcccCCCCCCCCCCcEEEEeeCCCceeEe
Q 012353 403 FVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFY 446 (465)
Q Consensus 403 y~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~v~~~~~R~Y 446 (465)
|+++++.+.. ++.+.....+|+|||++|++ |+|+|
T Consensus 345 y~~~~~~~~~--------~~~~~~~~~~~~~~l~~~~~-~~r~y 379 (379)
T TIGR01835 345 YEALFEETLP--------TDGDQPGEDRGFFRLAGIND-HKRIY 379 (379)
T ss_pred HHHHHHhccC--------CCCCcccCCCCcEEEEEecc-cEeeC
Confidence 9999986543 11113345689999999999 78888
No 6
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=100.00 E-value=3.9e-62 Score=473.33 Aligned_cols=270 Identities=54% Similarity=0.864 Sum_probs=224.3
Q ss_pred cccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhh---cCCCCCCCCceeeccCCch
Q 012353 175 VAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLE---GKQFSLSNADYFVFHSPYN 251 (465)
Q Consensus 175 ~~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~---~~~~~~~did~~~~H~p~~ 251 (465)
++|++++.|+||+|+||||||+..++||+|||++|++||+++++.||+.|+++..+.. ..+..++|||+++||.||+
T Consensus 1 iv~d~~~~~~~m~~~yDFyKP~~~seyP~VDG~~S~~~Yl~ald~~y~~y~~k~~~~~~~~~~~~~l~~~d~~~fH~Py~ 80 (282)
T PF08540_consen 1 IVFDRGLRGSHMEHVYDFYKPDLSSEYPVVDGKLSIQCYLDALDKCYKRYKEKVEKLANRGNKGTSLDDFDYVCFHSPYC 80 (282)
T ss_dssp EEEETTEEEEEE----SEE-BTTT-SS-EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSST--GGG-SEEEE--SSH
T ss_pred CcccCCCceeehhhchhccCCCCCCCCcEEchHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCccccceEEEecCch
Confidence 3577789999999999999999899999999999999999999999999999975432 3467889999999999999
Q ss_pred HHHHHHHHHhhhhhhcccccch-hhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchh
Q 012353 252 KLVQKSFARLLFNDFMRNASSV-DEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTA 330 (465)
Q Consensus 252 km~~~~~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~ta 330 (465)
||++|++.+|+++|+...+... .+...+.+.++.+++.++++.||+++|++.+.+++.|++||+||+.+++++||||||
T Consensus 81 klv~Ka~~rl~~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~dr~lek~~~~~s~~~~~~kv~psl~~~~~vGN~YTa 160 (282)
T PF08540_consen 81 KLVQKAFARLLYNDFLRNPSSEEFEEIDAELAPFRDLPLEESYFDRDLEKAFMKASKEDFERKVEPSLLYSRQVGNMYTA 160 (282)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCHHHHHHHCCHGGGTT--GGGHCTHHHHHHHHHHHHHHHHHHHCHHHTHHHHHHB--GGG
T ss_pred HHHHHHHHHHHHhhhhhccccccccccchhhhhhccCCcccccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHcCceehH
Confidence 9999999999999998766542 223345566677889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHH-hcCCCCCCCEEEEEEeccchheeeeEEEEeCCCCCCchhh-------HHhhccHHHHhccCCcCCHHH
Q 012353 331 SLYAALASLIH-NKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSN-------ILSVMNVAGKLKSRHEFPPEN 402 (465)
Q Consensus 331 S~~l~L~~ll~-~~~~~~~G~rill~syGsG~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~L~~R~~l~~~e 402 (465)
|+|++|+++|. .....+.|+||+|||||||+++++|++++++ ++++ +.+.+++.+||++|+++||+|
T Consensus 161 Sly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~-----~~~~~~~~~~~i~~~~dl~~rL~~R~~~s~ee 235 (282)
T PF08540_consen 161 SLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQP-----GAEEGSLLNRLIAKALDLKERLDARTKLSPEE 235 (282)
T ss_dssp HHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-T-----TGGGTSHHHHHHHHHHCHHHHHHTSEEE-HHH
T ss_pred HHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeC-----CccccchhhhHHHhhhhHHHHHhcCcCCCHHH
Confidence 99999999993 2234568999999999999999999999999 5555 777889999999999999999
Q ss_pred HHHHHHHHHHhcCCCCcccCCCCCCCCCCcEEEEeeCCCceeEeeec
Q 012353 403 FVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKK 449 (465)
Q Consensus 403 y~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~v~~~~~R~Y~~~ 449 (465)
|++++++|++.|++.+|.|.++++.++||+|||++||++|||+|+||
T Consensus 236 ye~~~~~re~~~~~~~y~p~~~~~~l~~GtyyL~~VD~~~RR~Y~rk 282 (282)
T PF08540_consen 236 YEEILKLREKTYGAKDYTPSGDISSLFPGTYYLTRVDDKHRRTYARK 282 (282)
T ss_dssp HHHHHHHHHHHTTHTSBETTSTGGGSGTTSEEEEEEETTSEEEEEE-
T ss_pred HHHHHHhhhhhccccCCCCCCcccccCCCCEEEcccCCcceEEeccC
Confidence 99999999999999999999999999999999999999999999986
No 7
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=2e-52 Score=412.34 Aligned_cols=306 Identities=21% Similarity=0.223 Sum_probs=262.7
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcCCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV 80 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 80 (465)
++++|.++|.|+|+..++++++++..+.+.+|+ .+||.+||.+ .++|...+||++||++||+++|++|+|||+||+
T Consensus 2 ~~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtGir~R~~a--~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~ 79 (323)
T COG0332 2 MNAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTGIRERRIA--ADDETTSDLAVEAARKALEDAGISPDDIDLIIV 79 (323)
T ss_pred CcceEEEEEeecCCcccChHHHHhccCCCcceeeeecCCceeeec--CCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 678999999999999999999999999999998 4899999965 779999999999999999999999999999999
Q ss_pred EeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc-cccCCCC---
Q 012353 81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-VYAEGPA--- 156 (465)
Q Consensus 81 ~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~y~~~~~--- 156 (465)
+|.||++..|++|+.||+.||+ .++.+||++.+|+|+++||.+|..+|++|.+ |+||||++|+. ++.++.+
T Consensus 80 aT~tpd~~~Ps~A~~vq~~LG~---~~~~afDl~aaCsgf~yaL~~A~~~i~sG~~--k~vLVVg~e~~S~~ld~~dR~t 154 (323)
T COG0332 80 ATSTPDHLFPSTACLVQARLGL---GGAPAFDLQAACSGFLYALSVADGLIRSGGY--KNVLVVGAETLSRILDWTDRDT 154 (323)
T ss_pred EcCCcccCCChHHHHHHHHhCC---CCcceeechhhhHHHHHHHHHHHHHHHcCCC--CEEEEEehhHhhccCCHhhccc
Confidence 9999999999999999999997 5699999999999999999999999999987 99999999998 4555544
Q ss_pred CcccccceeeeeecCCC-CcccccccccccccCcccccccCCC---------CCCcccCCchhHHHHHHHHHHHHHHHHH
Q 012353 157 RPTGGAAAVVMLVGPDA-PVAFESKLRGSHMSHAYDFYKPNLA---------SEYPVVDGKLSQTCYLMALDTCYKCLCS 226 (465)
Q Consensus 157 ~~t~GdGA~A~Ll~~~~-~~~~~~~~~~~~~~~~~df~~p~~~---------~~~p~~dg~~s~~~y~~~~~~~~~~~~~ 226 (465)
..+|||||+|+||++.+ ...+-....++.+....-.+.|... ..+..++|+..++.-.+.+.+++++.++
T Consensus 155 ~vlFgDGAgAvvl~~~~~~~~i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~ 234 (323)
T COG0332 155 CVLFGDGAGAVVLEATEDDNGILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLE 234 (323)
T ss_pred eEEEcCCceEEEEecCCCCcCeeeeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHHHHHHHHHH
Confidence 46799999999999986 3222111222222221112333221 1244689999888888888999988888
Q ss_pred HhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhh
Q 012353 227 KYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLA 306 (465)
Q Consensus 227 ~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~ 306 (465)
+. +++.+|||||++||+|.+|.+.+.++| ++|++ |++.++
T Consensus 235 ~~------~l~~~dId~~vpHQan~ri~~~i~~~l------------------------~~~~~---------k~~~~~- 274 (323)
T COG0332 235 KA------GLTPEDIDWFVPHQANLRIIEAIAKKL------------------------GIPEE---------KVVVTV- 274 (323)
T ss_pred Hc------CCCHHHCCEEccccccHHHHHHHHHHc------------------------CCCHH---------HHhhHH-
Confidence 76 799999999999999999999999998 66654 555677
Q ss_pred hhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEe
Q 012353 307 KPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLS 371 (465)
Q Consensus 307 ~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~ 371 (465)
.++||+++||+|++|..++++ +++++||+|+|.+||+|++|++++++|.
T Consensus 275 ---------------~~yGNtsaAsiplaL~~~~~~-g~ik~Gd~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 275 ---------------DKYGNTSAASIPLALDEALRE-GRIKPGDLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred ---------------HHhcccccchHHHHHHHHhhh-CCCCCCCEEEEEeecCcceeeeEEEEeC
Confidence 899999999999999999999 8999999999999999999999999984
No 8
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=2.4e-51 Score=415.89 Aligned_cols=334 Identities=25% Similarity=0.393 Sum_probs=272.9
Q ss_pred eeEEeEEEEecCCceechHHHHHhcCCChhhhh--hhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEE
Q 012353 4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKYT--IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVG 81 (465)
Q Consensus 4 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~--~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~ 81 (465)
+++|.+++.|+|+++|+++++++.++.+++++. +|+.+|+ +++++|+..+|+++|+++||+++|+++++||.|+++
T Consensus 1 ~~~I~g~g~~lP~~~v~n~~l~~~~~~~~~~i~~~~Gi~~r~--v~~~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~ 78 (345)
T TIGR00748 1 MAGIVGYGAYIPMYRIKVEEIARVWGKDPESISNGLPVEEKA--VPGLDEDTATIGVEAARNALKRAKIDPKDIGAVYVG 78 (345)
T ss_pred CccEEEEEEeCCCeeecHHHHHHHhCCCHhHeeeccceeeee--cCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 479999999999999999999999999999884 5666655 668899999999999999999999999999999999
Q ss_pred eecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccccCC-CCCccc
Q 012353 82 SETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEG-PARPTG 160 (465)
Q Consensus 82 T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~-~~~~t~ 160 (465)
|+++++..|+.+..|++.||+ .+++.++|++++|+|++.||.+|..+|++|.. ++||||++|..+..+. ..+.++
T Consensus 79 s~~~~~~~p~~a~~v~~~LGl--~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~--~~vLVv~~d~~~~~~~~~~~~~~ 154 (345)
T TIGR00748 79 SESHPYAVKPTATIVAEAIGA--TPDLTAADLEFACKAGTAGIQACMGLVASGMI--KYGLAIGADTAQGAPGDALEYTA 154 (345)
T ss_pred ecCCCccccchHHHHHHHcCC--CCCceEEEHHHhHHHHHHHHHHHHHHHHcCCC--CEEEEEEEeecccCCCccCcccC
Confidence 999998889999999999998 45788999999999999999999999999966 9999999999865332 235789
Q ss_pred ccceeeeeecCCCCc-ccccccccccccCcccccccCCCCCCcccCCchhH-HHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 012353 161 GAAAVVMLVGPDAPV-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQ-TCYLMALDTCYKCLCSKYEKLEGKQFSL 238 (465)
Q Consensus 161 GdGA~A~Ll~~~~~~-~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~-~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (465)
||||+|+||++.+.. .+.. . ..+..+..|+|++. +..+|...+++.. ..+++.+..+++.++++. ++++
T Consensus 155 GDGAaA~vl~~~~~~~~~~~-~-~~~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~------gl~~ 225 (345)
T TIGR00748 155 GAGGAAYIIGEKNTVAYFEG-T-YSYTTDTPDFWRRE-GEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKL------GLTP 225 (345)
T ss_pred CCceEEEEEccCCcceEeec-c-cceecccccccccC-CCcCCCcCCeecChHHHHHHHHHHHHHHHHHc------CCCH
Confidence 999999999987642 2221 1 12233445777764 2334444443322 235555556667776665 7999
Q ss_pred CCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCc
Q 012353 239 SNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPST 318 (465)
Q Consensus 239 ~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~ 318 (465)
+|||+|++|||+.+|++.+.++| |++.+++.. ++
T Consensus 226 ~did~~i~Hq~~~~~~~~~~~~l------------------------gl~~ek~~~----------------------~~ 259 (345)
T TIGR00748 226 EDFDYAVFHQPNGKFYLVAARML------------------------GFPKEQVKP----------------------GL 259 (345)
T ss_pred HHcCEEEeCCCChHHHHHHHHHc------------------------CCCHHHeec----------------------cc
Confidence 99999999999999999998888 777655431 11
Q ss_pred ccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEeCCCCCCchhhHHh-hccHHHHhccCCc
Q 012353 319 LIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILS-VMNVAGKLKSRHE 397 (465)
Q Consensus 319 ~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~~R~~ 397 (465)
..+++||+++||+|++|.++++. +++|++|+|++||+|++|++++++|++ .++..++ +-++.+.|++|+.
T Consensus 260 -~~~~~GNt~sAsipl~L~~~~~~---~~~Gd~vll~~~G~G~s~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 330 (345)
T TIGR00748 260 -LTPRIGNTYSGATPVGLSAVLDI---AEPGDRILAVSYGSGAGSDAFSIVVQD-----AIEEKRDLAPKVADYIKRKKY 330 (345)
T ss_pred -cccccCchhhhHHHHHHHHHHHh---cCCCCEEEEEEecCCcceeEEEEEEch-----hHHHHhhhhhhHHHHHhcCcc
Confidence 12799999999999999999863 689999999999999999999999998 7877763 2379999999999
Q ss_pred CCHHHHHHHH
Q 012353 398 FPPENFVEVM 407 (465)
Q Consensus 398 l~~~ey~~~~ 407 (465)
+++++|+++.
T Consensus 331 ~~~~~y~~~~ 340 (345)
T TIGR00748 331 IDYALYAKFR 340 (345)
T ss_pred CCHHHHHHHh
Confidence 9999999874
No 9
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=3.3e-51 Score=415.68 Aligned_cols=335 Identities=24% Similarity=0.385 Sum_probs=276.4
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcCCChhhhh--hhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYT--IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV 80 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~--~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 80 (465)
|+|+|.+++.|+|+.+|+++++++..+.+++|+. +|+.+|+ +++++++..+|+++|++++|+++|+++++||.|++
T Consensus 1 ~~v~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~Gi~~R~--~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~ 78 (347)
T PRK04262 1 MMVGIVGYGAYIPRYRIKVEEIARVWGDDPEAIKRGLGVEEKS--VPGPDEDTATIAVEAARNALKRAGIDPKEIGAVYV 78 (347)
T ss_pred CceeEEEEEEeCCCEEecHHHHHHHhCcCHHHHhhccCeeeee--cCCCCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 6799999999999999999999999999999874 6777776 66889999999999999999999999999999999
Q ss_pred EeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccccCC-CCCcc
Q 012353 81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEG-PARPT 159 (465)
Q Consensus 81 ~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~-~~~~t 159 (465)
+|+++++..|+.+.+|++.||+ .+++.++|++++|+|++.||..|..+|++|.. ++||||++|...+... ..+.+
T Consensus 79 ~s~~~~~~~p~~a~~v~~~Lgl--~~~~~~~dv~~~C~~~~~aL~~A~~~i~sg~~--~~aLVv~~e~~~~~~~~~~~~~ 154 (347)
T PRK04262 79 GSESHPYAVKPTATIVAEALGA--TPDLTAADLEFACKAGTAALQAAMGLVKSGMI--KYALAIGADTAQGAPGDALEYT 154 (347)
T ss_pred EecCCCcccccHHHHHHHHcCC--CCCceEEEHHHhHHHHHHHHHHHHHHHHcCCC--CEEEEEEEeeeccCCCCCCCCc
Confidence 9999998889999999999998 45688999999999999999999999999955 9999999999644332 23467
Q ss_pred cccceeeeeecCCCCc-ccccccccccccCcccccccCCCCCCcccCCchhH-HHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 012353 160 GGAAAVVMLVGPDAPV-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQ-TCYLMALDTCYKCLCSKYEKLEGKQFS 237 (465)
Q Consensus 160 ~GdGA~A~Ll~~~~~~-~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~-~~y~~~~~~~~~~~~~~~~~~~~~~~~ 237 (465)
+||||+|+||++++.. .+.. ..++..+..|+|++. +..+|.....++. ..|++.++++++.++++. +++
T Consensus 155 ~GDGA~A~ll~~~~~~~~i~~--~~~~~~d~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~------gl~ 225 (347)
T PRK04262 155 AAAGGAAFIIGKEEVIAEIEA--TYSYTTDTPDFWRRE-GEPYPRHGGRFTGEPAYFKHIISAAKGLMEKL------GLK 225 (347)
T ss_pred CCCCcEEEEEecCcccceeec--cccccccchhhcCCC-CCcCCCcCceecchHHHHHHHHHHHHHHHHHh------CcC
Confidence 8999999999986542 2211 112334556788754 2223433233322 256778888888888876 799
Q ss_pred CCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCC
Q 012353 238 LSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPS 317 (465)
Q Consensus 238 ~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s 317 (465)
++|||+|+|||++.+|++.+.++| +++.++.+. +
T Consensus 226 ~~dId~~v~Hq~n~~~~~~~~~~L------------------------gl~~ek~~~----------------------~ 259 (347)
T PRK04262 226 PSDYDYAVFHQPNGKFPLRVAKML------------------------GFTKEQVKP----------------------G 259 (347)
T ss_pred HHHhceeecCCCchHHHHHHHHHc------------------------CCCHHHhhc----------------------c
Confidence 999999999999999999999988 777665431 1
Q ss_pred cccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEeCCCCCCchhhHH-hhccHHHHhccCC
Q 012353 318 TLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNIL-SVMNVAGKLKSRH 396 (465)
Q Consensus 318 ~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~~R~ 396 (465)
. +.+++|||+|||+|++|.+++++ +++|++|+|++||+|+++++++++|++ .+++.+ ...++.+.|++|+
T Consensus 260 ~-~~~~~GNt~sAsi~~~L~~~~~~---~~~Gd~vll~~~G~G~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~ 330 (347)
T PRK04262 260 L-LTPYIGNTYSGSALLGLAAVLDV---AKPGDRILVVSFGSGAGSDAFSITVTD-----AIEEKRDLAPTVEDYLERKK 330 (347)
T ss_pred c-hhhhhCChHHHHHHHHHHHHHHh---CCCCCEEEEEecCCCcceeeEEEEech-----hHHHhhhccccHHHHHhCCc
Confidence 1 12899999999999999999874 579999999999999999999999998 676654 2347999999999
Q ss_pred cCCHHHHHHHH
Q 012353 397 EFPPENFVEVM 407 (465)
Q Consensus 397 ~l~~~ey~~~~ 407 (465)
.+++++|+++.
T Consensus 331 ~~~~~~y~~~~ 341 (347)
T PRK04262 331 YIDYAVYAKYR 341 (347)
T ss_pred cCCHHHHHHHh
Confidence 99999998763
No 10
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=100.00 E-value=7.3e-50 Score=357.05 Aligned_cols=174 Identities=54% Similarity=0.864 Sum_probs=152.7
Q ss_pred CCceeEEeEEEEecCCceechHHHHHhcCCChhhhhhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 012353 1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV 80 (465)
Q Consensus 1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 80 (465)
+|++|||++|++|+|+++|++++|++++|++++||++||||.+|+|++++||+++||++|++++|++.+++|++|++|+|
T Consensus 1 ~p~~VGI~~i~~y~p~~~v~~~~La~~~g~d~~K~~~glgq~~~av~~~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~v 80 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPRYYVDQEELAEARGVDPGKYTIGLGQEKMAVPPPDEDIVTMAANAAKPLLDRYNIDPDDIGRLIV 80 (174)
T ss_dssp --SSEEEEEEEEE-ESEEEEHHHHHHHTTS-TCHHHTTT--SEEEE--TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEE
T ss_pred CCccccEeEEEEecCceEecHHHHHHHhCCCHHHhhhhcCeeEEEeCCCcccHHHHHHHHHHHHHHHcCCCHHHccEEEE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccccCCCCCccc
Q 012353 81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTG 160 (465)
Q Consensus 81 ~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~ 160 (465)
||||++|.+|+++++||++||+.++++|+++|+++||||||+||++|.+||+++.+||+++|||++|+++|..++.|+|+
T Consensus 81 gTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDiA~y~~g~~e~Tq 160 (174)
T PF01154_consen 81 GTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDIARYDLGSAEPTQ 160 (174)
T ss_dssp E-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEEE--STTTTGGG-
T ss_pred eccccccccccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccccccCCCCccccc
Confidence 99999999999999999999997778899999999999999999999999999999999999999999999988889999
Q ss_pred ccceeeeeecCCCC
Q 012353 161 GAAAVVMLVGPDAP 174 (465)
Q Consensus 161 GdGA~A~Ll~~~~~ 174 (465)
|+|||||||++++|
T Consensus 161 GAGAVAmLi~~nap 174 (174)
T PF01154_consen 161 GAGAVAMLIGPNAP 174 (174)
T ss_dssp EEEEEEEEEECS-S
T ss_pred cceeEEEEecCCCC
Confidence 99999999999875
No 11
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=2.1e-47 Score=384.81 Aligned_cols=302 Identities=18% Similarity=0.188 Sum_probs=247.5
Q ss_pred eeEEeEEEEecCCceechHHHHHhcCCChhhhh--hhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEE
Q 012353 4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKYT--IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVG 81 (465)
Q Consensus 4 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~--~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~ 81 (465)
+++|.+++.|+|+.+|+++++++..|.+++++. +|+.+|+ +++++|++.+||++||+++|+++|+++++||+||++
T Consensus 3 ~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~r~--~~~~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ 80 (326)
T PRK05963 3 SSRIAGFGHAVPDRRVENAEIEAQLGLETGWIERRTGIRCRR--WAAPDETLSDLAASAGDMALSDAGIERSDIALTLLA 80 (326)
T ss_pred ccEEEEEEEECCCCeecHHHHHHHcCCCHHHhhhccCCeEEE--EcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 589999999999999999999999999888874 5666666 557899999999999999999999999999999999
Q ss_pred eecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccccc-CC---CCC
Q 012353 82 SETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA-EG---PAR 157 (465)
Q Consensus 82 T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~-~~---~~~ 157 (465)
|+++++..|+.+.+|+++||+ +++.+||++++|+|++.||++|.++|+++ . ++||||++|..+.. +. ...
T Consensus 81 t~~~d~~~p~~a~~v~~~Lg~---~~~~~~di~~~C~g~~~aL~~A~~~l~~~--~-~~aLVv~~d~~s~~~~~~~~~~~ 154 (326)
T PRK05963 81 TSTPDHLLPPSAPLLAHRLGL---QNSGAIDLAGACAGFLYALVLADGFVRAQ--G-KPVLVVAANILSRRINMAERASA 154 (326)
T ss_pred CCCCCCCCCcHHHHHHHHhCC---CCCceeeccchhhHHHHHHHHHHHHHHcC--C-CeEEEEEechhhccCCccccCce
Confidence 999988899999999999997 46789999999999999999999999987 3 89999999987432 21 234
Q ss_pred cccccceeeeeecCCCC--cccccccccccccCccccc-ccCCCCC-------------CcccCCchhHHHHHHHHHHHH
Q 012353 158 PTGGAAAVVMLVGPDAP--VAFESKLRGSHMSHAYDFY-KPNLASE-------------YPVVDGKLSQTCYLMALDTCY 221 (465)
Q Consensus 158 ~t~GdGA~A~Ll~~~~~--~~~~~~~~~~~~~~~~df~-~p~~~~~-------------~p~~dg~~s~~~y~~~~~~~~ 221 (465)
.+|||||+|+||++++. ..+......++.. .+|++ .|.++.. +...+|+..++.+.+.+.+++
T Consensus 155 ~lfGDgA~A~ll~~~~~~~~~~l~~~~~t~~~-~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (326)
T PRK05963 155 VLFADAAGAVVLAPSAKANSGVLGSQLISDGS-HYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGAS 233 (326)
T ss_pred EEEeecceEEEEEecCCCCCceEEEEEEEcCC-CCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHH
Confidence 67999999999998653 1111111112111 23332 2332211 122467777777788888888
Q ss_pred HHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHH
Q 012353 222 KCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKV 301 (465)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~ 301 (465)
++++++. |++++|||+|++||++.+|++++.++| +++.++..
T Consensus 234 ~~~L~~~------gl~~~did~~~~h~~~~~~~~~~~~~l------------------------~l~~~k~~-------- 275 (326)
T PRK05963 234 QNVLASA------AMTPQDIDRFFPHQANARIVDKVCETI------------------------GIPRAKAA-------- 275 (326)
T ss_pred HHHHHHc------CCCHHHCCEEEeCCCCHHHHHHHHHHc------------------------CCCHHHhh--------
Confidence 8888776 799999999999999999999999888 77766432
Q ss_pred HHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEE
Q 012353 302 SQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL 370 (465)
Q Consensus 302 ~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~ 370 (465)
.++ +++||+++||+|++|..++++ +++++||+|+++++|+|+++++++++|
T Consensus 276 -~~l----------------~~~Gn~~sas~~~~L~~~~~~-~~~~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 276 -STL----------------ETYGNSSAATIPLSLSLANLE-QPLREGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred -hhH----------------HhhCcHHHHHHHHHHHHHHHh-CCCCCCCEEEEEEEehhhhheeeEEeC
Confidence 345 899999999999999999988 788899999999999999999999986
No 12
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=5.6e-46 Score=374.05 Aligned_cols=308 Identities=16% Similarity=0.215 Sum_probs=249.2
Q ss_pred CCceeEEeEEEEecCCceechHHHHHhcCCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEE
Q 012353 1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRL 78 (465)
Q Consensus 1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~l 78 (465)
|+++++|.++++|+|+++++++|+++..+.+.+++ ++|+.+|++ +.++|+..+|+++|++++|+++|+++++||.|
T Consensus 1 ~~~~~~I~~ig~~~P~~~v~~~e~~~~~~~~~~~i~~~~Gi~~r~~--~~~~~~~~~la~~A~~~al~~ag~~~~~Id~l 78 (325)
T PRK12879 1 MMSYARITGIGTYVPPRVLTNDDLETFIDTSDEWIVQRTGIKERRI--AHVEEYTSDLAIKAAERALARAGLDAEDIDLI 78 (325)
T ss_pred CCCCCEEEEEEEECCCcEEcHHHHHHhcCCCHHHhhhccCceEEEE--CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 78999999999999999999999999988777766 478888875 47899999999999999999999999999999
Q ss_pred EEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc-cCC---
Q 012353 79 EVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEG--- 154 (465)
Q Consensus 79 i~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~--- 154 (465)
|++|+++++..|+.+.+|++.||+ +++.+++++++|+|++.||.+|..+|++|.. ++||||++|.++. .+.
T Consensus 79 i~~~~~~~~~~~~~a~~l~~~lg~---~~~~~~~v~~~C~~~~~al~~A~~~l~~g~~--~~~Lvv~~e~~s~~~~~~~~ 153 (325)
T PRK12879 79 IVATTTPDYLFPSTASQVQARLGI---PNAAAFDINAACAGFLYGLETANGLITSGLY--KKVLVIGAERLSKVTDYTDR 153 (325)
T ss_pred EEEcCCCCCCCChHHHHHHHHhCC---CCCcEEEECccchHHHHHHHHHHHHHHcCCC--CEEEEEEehhhcCcCCcccc
Confidence 999999888899999999999997 4578999999999999999999999999965 9999999998732 222
Q ss_pred CCCcccccceeeeeecCCCC-cccccccccccccCcccccccCCCCC----------CcccCCchhHHHHHHHHHHHHHH
Q 012353 155 PARPTGGAAAVVMLVGPDAP-VAFESKLRGSHMSHAYDFYKPNLASE----------YPVVDGKLSQTCYLMALDTCYKC 223 (465)
Q Consensus 155 ~~~~t~GdGA~A~Ll~~~~~-~~~~~~~~~~~~~~~~df~~p~~~~~----------~p~~dg~~s~~~y~~~~~~~~~~ 223 (465)
....+|||||+|+||++++. ..+.....++..+....+++|..++. +..++|+..+...++.+.+++++
T Consensus 154 ~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 233 (325)
T PRK12879 154 TTCILFGDGAGAVVLEATENEPGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQ 233 (325)
T ss_pred CceEEEeecceEEEEEecCCCCCeEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHH
Confidence 22357999999999998763 12111111222211122233322221 22345655555555667778888
Q ss_pred HHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHH
Q 012353 224 LCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQ 303 (465)
Q Consensus 224 ~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~ 303 (465)
++++. ++.++|||+|++||++.++++.+.++| +++.++.+ .
T Consensus 234 ~L~~~------g~~~~did~~~~h~~~~~~~~~~~~~l------------------------g~~~~~~~---------~ 274 (325)
T PRK12879 234 VLEKA------GLTKDDIDWVIPHQANLRIIESLCEKL------------------------GIPMEKTL---------V 274 (325)
T ss_pred HHHHc------CCCHHHCCEEEECCCCHHHHHHHHHHc------------------------CCCHHHhh---------h
Confidence 87775 799999999999999999999998888 77766543 2
Q ss_pred hhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEe
Q 012353 304 QLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLS 371 (465)
Q Consensus 304 ~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~ 371 (465)
++ +++||++++|+|++|.+++++ +.+++|++|+|++||+|+++++++++|+
T Consensus 275 ~~----------------~~~Gn~~sas~~~~L~~~~~~-g~~~~Gd~vll~~~G~G~~~~~~l~~~~ 325 (325)
T PRK12879 275 SV----------------EYYGNTSAATIPLALDLALEQ-GKIKPGDTLLLYGFGAGLTWAALLVKWG 325 (325)
T ss_pred hH----------------hhhCchHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchhhhhEEEEEEeC
Confidence 34 899999999999999999998 7889999999999999999999999984
No 13
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.9e-45 Score=371.08 Aligned_cols=301 Identities=20% Similarity=0.217 Sum_probs=240.1
Q ss_pred ceeEEeEEEEecCCceechHHH-HHhcCCCh---hhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCcc
Q 012353 3 KNVGILAMDIYFPPTCVQQEAL-EAHDGASK---GKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIG 76 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l-~~~~g~~~---~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id 76 (465)
++++|.++++|+|+++|+++++ .+..+.+. .++ .+||.+|+++ .++|++.+||++|+++||+++|++++|||
T Consensus 6 ~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~--~~~e~~~~la~~Aa~~aL~~a~~~~~dId 83 (353)
T PRK12880 6 DKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKKVIGLNTRYIC--DENTCVSDLGKHAANTLLQGLNIDKNSLD 83 (353)
T ss_pred cccEEEEEEEECCCeEecHHHHHHHhcCcchhhhhhhhhccCceEEEeC--CCCCCHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 5689999999999999999975 44443221 233 3788888854 67999999999999999999999999999
Q ss_pred EEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc-cCC-
Q 012353 77 RLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEG- 154 (465)
Q Consensus 77 ~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~- 154 (465)
+||++|+|+++..|+++.+|+++||+ .+++.+||+++||+|++.||++|..|+++|. .+ ||||++|.++. .+.
T Consensus 84 ~lI~~t~t~d~~~P~~a~~v~~~Lg~--~~~~~~~di~~~C~g~~~aL~~A~~~i~~~~--~~-~LVv~~e~~S~~~~~~ 158 (353)
T PRK12880 84 ALIVVTQSPDFFMPSTACYLHQLLNL--SSKTIAFDLGQACAGYLYGLFVAHSLIQSGL--GK-ILLICGDTLSKFIHPK 158 (353)
T ss_pred EEEEEcCCCCCCCCcHHHHHHHHhCC--CCCceEEehhhhhHHHHHHHHHHHHHHHcCC--CC-EEEEEehhhhccCCcc
Confidence 99999999999999999999999998 5688999999999999999999999999994 48 99999998743 222
Q ss_pred --CCCcccccceeeeeecCCCCc-c-cccccccccccCcccccccCCCC----------------------CCcccCCch
Q 012353 155 --PARPTGGAAAVVMLVGPDAPV-A-FESKLRGSHMSHAYDFYKPNLAS----------------------EYPVVDGKL 208 (465)
Q Consensus 155 --~~~~t~GdGA~A~Ll~~~~~~-~-~~~~~~~~~~~~~~df~~p~~~~----------------------~~p~~dg~~ 208 (465)
...++|||||+|+||++++.- . +.....+.+. .....|.++. .+-.++|+.
T Consensus 159 d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~~~~~~---~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 235 (353)
T PRK12880 159 NMNLAPIFGDGVSATLIEKTDFNEAFFELGSDGKYF---DKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGAN 235 (353)
T ss_pred cCCceeeecccceEEEEEecCCCCceEEEEecCCCC---CeEEecCCCcCCCccccccccccccccccccCceEEEcCHH
Confidence 235789999999999875421 1 1111111111 1111221110 112467888
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCC
Q 012353 209 SQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLS 288 (465)
Q Consensus 209 s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~ 288 (465)
.++.+++.++.++++++++. |++.+|||+|++||++.+|++.+.++| +++
T Consensus 236 v~~~~~~~~~~~i~~~L~~~------gl~~~did~~v~HQ~~~~i~~~i~~~L------------------------gl~ 285 (353)
T PRK12880 236 IFNMALECEPKSFKEILEFS------KVDEKDIAFHLFHQSNAYLVDCIKEEL------------------------KLN 285 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHc------CCCHHHCCEEEECCCCHHHHHHHHHHh------------------------CCC
Confidence 88888888888999888876 799999999999999999999999998 777
Q ss_pred CCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEE
Q 012353 289 GDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSL 368 (465)
Q Consensus 289 ~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~ 368 (465)
+++... ..+ +++||++++|+|++|..++++ +++ +++|+++|+|++|+++++
T Consensus 286 ~ek~~~--------~~l----------------~~~GNtssasip~~L~~~~~~-~~~----~~ll~~~G~G~s~g~~ll 336 (353)
T PRK12880 286 DDKVPN--------FIM----------------EKYANLSACSLPALLCELDTP-KEF----KASLSAFGAGLSWGSAVL 336 (353)
T ss_pred HHHhhh--------hhH----------------HhhCCHHHHHHHHHHHHHHHc-CCc----EEEEEEEchhhhheEeEE
Confidence 765320 123 899999999999999999886 443 599999999999999999
Q ss_pred EEeC
Q 012353 369 KLSE 372 (465)
Q Consensus 369 ~~~~ 372 (465)
+|.+
T Consensus 337 ~~~~ 340 (353)
T PRK12880 337 NFKD 340 (353)
T ss_pred EECC
Confidence 9976
No 14
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=7.9e-45 Score=366.48 Aligned_cols=306 Identities=15% Similarity=0.149 Sum_probs=246.6
Q ss_pred CCceeEEeEEEEecCCceechHHHHHhcCCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEE
Q 012353 1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRL 78 (465)
Q Consensus 1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~l 78 (465)
|.++++|.++++|+|+++++++++++..+.+.+++ .+|+.+|+++ . +|+..+|+++|++++|+++|+++++||+|
T Consensus 1 ~~~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~R~~~--~-~~~~~~la~~Aa~~aL~~ag~~~~dId~l 77 (329)
T PRK07204 1 MKRYISIKGIGTYLPKRKVDSLELDKKLDLPEGWVLKKSGVKTRHFV--D-GETSSYMGAEAAKKAVEDAKLTLDDIDCI 77 (329)
T ss_pred CCCCcEEEEEEEeCCCceecHHHHHHhhCCCHhHhhhccCceEEeec--C-CCCHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 77889999999999999999999999999887777 4677777754 4 89999999999999999999999999999
Q ss_pred EEEeecCCCCcccHHHHHHHHhcccCCC-CceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccccc-CCC-
Q 012353 79 EVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA-EGP- 155 (465)
Q Consensus 79 i~~T~s~~~~~ps~a~~l~~~LGl~g~~-~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~-~~~- 155 (465)
|++|+++.+..|+.+.+|++.||+ .. .+.++|++++|+|++.||.+|..++++|.. ++||||++|.++.. +..
T Consensus 78 i~~~~~~~~~~p~~a~~v~~~lgl--~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~--~~~Lvv~~e~~s~~~~~~~ 153 (329)
T PRK07204 78 ICASGTIQQAIPCTASLIQEQLGL--QHSGIPCFDINSTCLSFITALDTISYAIECGRY--KRVLIISSEISSVGLNWGQ 153 (329)
T ss_pred EEECCCCCCCCccHHHHHHHHhCC--CCCCceEEEccchhHHHHHHHHHHHHHHHCCCC--CEEEEEEeccccCCCCccc
Confidence 999999988889999999999997 33 478999999999999999999999999965 99999999997432 222
Q ss_pred --CCcccccceeeeeecCCCC-cccccccccccccCcccc-cccCCC--------------CCCcccCCchhHHHHHHHH
Q 012353 156 --ARPTGGAAAVVMLVGPDAP-VAFESKLRGSHMSHAYDF-YKPNLA--------------SEYPVVDGKLSQTCYLMAL 217 (465)
Q Consensus 156 --~~~t~GdGA~A~Ll~~~~~-~~~~~~~~~~~~~~~~df-~~p~~~--------------~~~p~~dg~~s~~~y~~~~ 217 (465)
...+|||||+|+||++++. ..+......++... .++ ..|.++ ..+..++|+..++...+.+
T Consensus 154 ~~~~~lfGDGAaA~ll~~~~~~~~il~~~~~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (329)
T PRK07204 154 NESCILFGDGAAAVVITKGDHSSRILASHMETYSSG-AHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYL 232 (329)
T ss_pred CcceEEEecccEEEEEEEcCCCCcEEEEEEEEecCC-CCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHHH
Confidence 2356999999999998753 11111011111110 011 001100 0012346666666666778
Q ss_pred HHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchh
Q 012353 218 DTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRD 297 (465)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~ 297 (465)
++++++++++. |++++|||+|++||++.++++.+.++| ++|.++.
T Consensus 233 ~~~i~~~L~~~------gl~~~did~~~~H~~~~~~~~~i~~~l------------------------~l~~e~~----- 277 (329)
T PRK07204 233 MKFIDKLLMDA------GYTLADIDLIVPHQASGPAMRLIRKKL------------------------GVDEERF----- 277 (329)
T ss_pred HHHHHHHHHHc------CCCHHHCCEEEeCCCCHHHHHHHHHHc------------------------CCCHHHh-----
Confidence 88888888776 799999999999999999999998888 7776543
Q ss_pred HHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEE
Q 012353 298 LEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL 370 (465)
Q Consensus 298 ~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~ 370 (465)
+.++ +++||++++|+|++|.+++++ +++++|++|+|+++|+|+++++.+++|
T Consensus 278 ----~~~~----------------~~~Gn~~sas~~~~L~~~~~~-g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 278 ----VTIF----------------EDHGNMIAASIPVALFEAIKQ-KKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred ----hhhH----------------hhhCcHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 2345 899999999999999999998 788999999999999999999999875
No 15
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=1.5e-44 Score=363.99 Aligned_cols=304 Identities=21% Similarity=0.267 Sum_probs=243.6
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcCCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV 80 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 80 (465)
|.|+|.++++|+|+++|+++|+++..+.+..++ ++|+.+|++ ..++++..+|+.+|++++|+++|++|++||.||+
T Consensus 1 ~~v~I~~~g~~lP~~~v~~~e~~~~~~~~~~~i~~~~gi~~r~~--~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~ 78 (326)
T CHL00203 1 MGVHILSTGSSVPNFSVENQQFEDIIETSDHWISTRTGIKKRHL--APSSTSLTKLAAEAANKALDKAHMDPLEIDLIIL 78 (326)
T ss_pred CccEEEEEEEECCCeEEcHHHHHHhcCCChhhEeeccCeEEEEe--CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 578999999999999999999999998766666 578888774 4789999999999999999999999999999999
Q ss_pred EeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc-cCC---CC
Q 012353 81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEG---PA 156 (465)
Q Consensus 81 ~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~---~~ 156 (465)
+|+++.+.. ..+.++++.||+ .++.+++++++|+|++.||.+|..+|++|.. +++|||++|..+. .+. ..
T Consensus 79 ~s~~~~~~~-~~~~~v~~~Lg~---~~~~~~~v~~~Casg~~al~~A~~~i~sg~~--~~~Lvv~~e~~s~~~~~~~~~~ 152 (326)
T CHL00203 79 ATSTPDDLF-GSASQLQAEIGA---TRAVAFDITAACSGFILALVTATQFIQNGSY--KNILVVGADTLSKWIDWSDRKT 152 (326)
T ss_pred EeCCCCCCC-chHHHHHHHhCC---CCCceeeecccchhHHHHHHHHHHHHHcCCC--CEEEEEEehhhhCcCCcccCCc
Confidence 998887654 557899999996 5678899999999999999999999999966 9999999999743 222 23
Q ss_pred CcccccceeeeeecCCCCcc---cccccccccccCcccc-ccc------------CCCCCCcccCCchhHHHHHHHHHHH
Q 012353 157 RPTGGAAAVVMLVGPDAPVA---FESKLRGSHMSHAYDF-YKP------------NLASEYPVVDGKLSQTCYLMALDTC 220 (465)
Q Consensus 157 ~~t~GdGA~A~Ll~~~~~~~---~~~~~~~~~~~~~~df-~~p------------~~~~~~p~~dg~~s~~~y~~~~~~~ 220 (465)
..+|||||+|+||++.+... +.....+.+.... .+ ..| .....+..++|+..+...++.++.+
T Consensus 153 ~~~fgDga~A~ll~~~~~~~~~~~~~~t~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 231 (326)
T CHL00203 153 CILFGDGAGAAIIGASYENSILGFKLCTDGKLNSHL-QLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAV 231 (326)
T ss_pred eEEEcceeeEEEEEEcCCCCeEEEEEEEcCCCcceE-EecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHH
Confidence 46799999999999865311 1111111111100 01 111 1011122356766666666677778
Q ss_pred HHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHH
Q 012353 221 YKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEK 300 (465)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k 300 (465)
++.++++. |++++|||+|++||++.++++.+.++| ++|.++..
T Consensus 232 i~~~L~~~------g~~~~did~~~~hq~~~~~~~~~~~~l------------------------gl~~~k~~------- 274 (326)
T CHL00203 232 IIKCLNAL------NISIDEVDWFILHQANKRILEAIANRL------------------------SVPNSKMI------- 274 (326)
T ss_pred HHHHHHHc------CCCHHHCCEEEECCCCHHHHHHHHHHh------------------------CCCHHHhh-------
Confidence 88887775 799999999999999999999999888 78776543
Q ss_pred HHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEe
Q 012353 301 VSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLS 371 (465)
Q Consensus 301 ~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~ 371 (465)
.++ +++||+++||+|++|.+++++ +++++|++|+|+++|+|+++++++++|+
T Consensus 275 --~~l----------------~~~Gn~~sasi~~~L~~~~~~-g~~~~Gd~vll~~~G~G~s~~~~v~~~~ 326 (326)
T CHL00203 275 --TNL----------------EKYGNTSAASIPLALDEAIQN-NKIQPGQIIVLSGFGAGLTWGAIVLKWK 326 (326)
T ss_pred --hHH----------------HhhCcHHHHHHHHHHHHHHHh-CCCCCCCEEEEEEEchhhhheEEEEEeC
Confidence 345 899999999999999999998 7889999999999999999999999985
No 16
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.9e-44 Score=365.03 Aligned_cols=306 Identities=20% Similarity=0.204 Sum_probs=246.8
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc-------CCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcC
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD-------GASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPK 73 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~-------g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~ 73 (465)
.+|+|.++++|+|+++++++++++.. +.+++++ .+|+.+|++ .+++++..+|+++|++++|+++|++++
T Consensus 4 ~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~--~~~~~~~~~la~~Aa~~aL~~ag~~~~ 81 (338)
T PRK09258 4 SNVAILSLAYELAPVVVTSSEIEERLAPLYERLRLPPGQLEALTGIRERRW--WPEGTQLSDGAIAAGRKALAEAGIDPS 81 (338)
T ss_pred cceEEEEEEecCCCccCcHHHHHHHhhhcccccCCChhHhhhhcCceeEec--CCCCCCHHHHHHHHHHHHHHHcCCCHH
Confidence 46999999999999999999999863 3455656 368888875 477999999999999999999999999
Q ss_pred CccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccccc-
Q 012353 74 QIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA- 152 (465)
Q Consensus 74 ~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~- 152 (465)
+||.|+++|+++++..|+++.+|++.||+ ..++.++|++++|+|++.||.+|..+|++|.. ++||||++|.++..
T Consensus 82 ~Id~li~~s~~~~~~~p~~a~~v~~~lgl--~~~~~~~~v~~~C~~~~~al~~A~~~i~~g~~--~~~Lvv~~e~~s~~~ 157 (338)
T PRK09258 82 DIGLLINTSVCRDYLEPATACRVHHNLGL--PKSCANFDVSNACLGFLNGMLDAANMIELGQI--DYALVVSGESAREIV 157 (338)
T ss_pred HCCEEEEEcCCCCCCCChHHHHHHHHcCC--CCCCceeehhhhhHHHHHHHHHHHHHHHcCCC--CEEEEEEecccchhc
Confidence 99999999999988899999999999998 45788999999999999999999999999955 99999999987321
Q ss_pred ---------CCCC---------CcccccceeeeeecCCCCcccccccccccccCcccccccC-CCCCCcccCCchhHHHH
Q 012353 153 ---------EGPA---------RPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPN-LASEYPVVDGKLSQTCY 213 (465)
Q Consensus 153 ---------~~~~---------~~t~GdGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~-~~~~~p~~dg~~s~~~y 213 (465)
+... ..+|||||+|+||++++...-...+.+..+....+++... ....+..++++..+..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (338)
T PRK09258 158 EATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHPRGHRLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEG 237 (338)
T ss_pred cchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCCCcceeeeeeeecCCCcccccccCccceEEcHHHHHHHH
Confidence 1111 2469999999999986531000112222221111222110 01223456888888888
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccc
Q 012353 214 LMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESY 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 293 (465)
++.+.+++++++++. |++++|||+|++||++.++++.+.++| +++.++.+
T Consensus 238 ~~~~~~~~~~~L~~~------g~~~~did~~i~H~~~~~~~~~~~~~l------------------------gl~~~k~~ 287 (338)
T PRK09258 238 VELAVDTWEAFLAQL------GWAVEQVDRVICHQVGAAHTRAILKAL------------------------GIDPEKVF 287 (338)
T ss_pred HHHHHHHHHHHHHHc------CCCHHHCCEEecCCCCHHHHHHHHHHh------------------------CCCHHHce
Confidence 888888888888776 799999999999999999999999888 77776543
Q ss_pred cchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEE
Q 012353 294 QSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL 370 (465)
Q Consensus 294 ~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~ 370 (465)
.++ +++|||+++|+|++|.+++++ +++++|++|+|++||+|+++++++++|
T Consensus 288 ---------~~~----------------~~~GN~~sas~~~~L~~~~~~-g~~~~Gd~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 288 ---------TTF----------------PTLGNMGPASLPITLAMAAEE-GFLKPGDRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred ---------ehH----------------hhhCCcHHhHHHHHHHHHHHh-CCCCCCCEEEEEEechhHhhHhHeeeC
Confidence 234 799999999999999999988 788999999999999999999999886
No 17
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=9.7e-44 Score=364.78 Aligned_cols=305 Identities=16% Similarity=0.197 Sum_probs=241.0
Q ss_pred CceeEEeEEEEecCCceechHHHHHhcCCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEE
Q 012353 2 AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLE 79 (465)
Q Consensus 2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li 79 (465)
+++++|.+++.|+|+++++++++.+..+.+++++ ++||.+|++ +.++|+..+|+++|+++||+++|++++|||+||
T Consensus 45 ~~~~~I~g~g~~lP~~~v~n~el~~~~~~~~~~i~~~tGi~~R~~--~~~~~~~~~La~~Aa~~aL~~agi~~~dId~li 122 (379)
T PLN02326 45 GSGSKLVGCGSAVPKLLITNDDLSKLVDTSDEWIATRTGIRNRRV--LSGDETLTSLAVEAAKKALEMAGVDPEDVDLVL 122 (379)
T ss_pred cCCcEEEEEEEECCCceecHHHHHHhcCCchhheecccCcceEee--cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 3679999999999999999999999988777776 578888774 468899999999999999999999999999999
Q ss_pred EEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc-cccCCCC--
Q 012353 80 VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-VYAEGPA-- 156 (465)
Q Consensus 80 ~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~y~~~~~-- 156 (465)
++|+++++. ++.+.+|+++||+ .++.++|++++|+|++.||.+|..+|++|.. ++||||++|.. .+.++.+
T Consensus 123 ~~s~~~~~~-~~~a~~v~~~LG~---~~~~~~dv~~~Ca~~~~aL~~A~~~l~~g~~--~~vLVv~~e~~s~~~~~~d~~ 196 (379)
T PLN02326 123 LCTSSPDDL-FGSAPQVQAALGC---TNALAFDLTAACSGFVLGLVTAARFIRGGGY--KNVLVIGADALSRYVDWTDRG 196 (379)
T ss_pred EEeCCCCcc-CcHHHHHHHHhCC---CCCceeeccccchHHHHHHHHHHHHHHcCCC--CEEEEEEechhcCCCCccccC
Confidence 999988775 4678899999997 4789999999999999999999999999955 99999999997 3433322
Q ss_pred -CcccccceeeeeecCCCCc--c---cccccccccccCc----ccc-----cccC-C-------CCCC--cccCCchhHH
Q 012353 157 -RPTGGAAAVVMLVGPDAPV--A---FESKLRGSHMSHA----YDF-----YKPN-L-------ASEY--PVVDGKLSQT 211 (465)
Q Consensus 157 -~~t~GdGA~A~Ll~~~~~~--~---~~~~~~~~~~~~~----~df-----~~p~-~-------~~~~--p~~dg~~s~~ 211 (465)
..+|||||+|+||++++.. . +.....+.+.... .+. ..|. . ...+ ..++|+..+.
T Consensus 197 ~~~lfGDGAaAvlL~~~~~~~~~i~~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~ 276 (379)
T PLN02326 197 TCILFGDGAGAVVLQACDDDEDGLLGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFK 276 (379)
T ss_pred ceEEEcceeEEEEEEEcCCCCCceEEEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHH
Confidence 3579999999999986421 1 1111111111100 000 0000 0 0001 2245655555
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCc
Q 012353 212 CYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDE 291 (465)
Q Consensus 212 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 291 (465)
...+.++++++.++++. |++++|||+|++||++.++++.+.++| |+++++
T Consensus 277 ~~~~~~~~~i~~~L~~~------gl~~~dId~~v~Hq~n~~~~~~~~~~L------------------------gl~~ek 326 (379)
T PLN02326 277 FAVRCVPQVIESALQKA------GLTAESIDWLLLHQANQRIIDAVAQRL------------------------GIPPEK 326 (379)
T ss_pred HHHHHHHHHHHHHHHHc------CCCHHHCCEEEECCCCHHHHHHHHHHc------------------------CCCHHH
Confidence 55566777777777665 799999999999999999999998888 787765
Q ss_pred cccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEE
Q 012353 292 SYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL 370 (465)
Q Consensus 292 ~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~ 370 (465)
+. .++ +++||+++||+|++|.+++++ +++++||+|+|++||+|++|++.+++|
T Consensus 327 ~~---------~~l----------------~~~GNt~sAsi~~~L~~~~~~-g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 327 VI---------SNL----------------ANYGNTSAASIPLALDEAVRS-GKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred ee---------ecH----------------hhcCcHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 43 234 799999999999999999998 788999999999999999999999986
No 18
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=2.1e-43 Score=357.60 Aligned_cols=308 Identities=18% Similarity=0.138 Sum_probs=239.4
Q ss_pred CCceeEEeEEEEecCCceechHHHHHhcCCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEE
Q 012353 1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRL 78 (465)
Q Consensus 1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~l 78 (465)
|||+|+|.++++|+|+..|+++++++..|.+.+++ ++|+.+|+ ++.++|+..+|+++|++++|+++|++|++||.|
T Consensus 1 ~~~~v~I~~~~~~lP~~~v~~~~l~~~~g~~~~~~~~~~Gi~~r~--~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~l 78 (339)
T PRK06840 1 MEMNVGIVGTGVYLPKDVMTAEEIAEKTGIPEEVVIEKFGIYEKP--VPGPEDHTSDMAIAAAKPALKQAGVDPAAIDVV 78 (339)
T ss_pred CCCceEEEEEEEeCCCcccCHHHHHHHhCCCHHHHhhhcCcceEe--eCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 89999999999999999999999999999888877 36777776 557889999999999999999999999999999
Q ss_pred EEEee-cCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHc-CCCCCCEEEEEEecccc-cc---
Q 012353 79 EVGSE-TVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVES-SSWDGRYGLVVCTDSAV-YA--- 152 (465)
Q Consensus 79 i~~T~-s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~s-g~~~~~~aLVVasD~~~-y~--- 152 (465)
|++++ ++++..|+.+.+|++.||+ +++.++++.++|+|++.||.+|..+|++ +.. +++|||++|..+ ..
T Consensus 79 i~~~~~~~~~~~p~~a~~l~~~lGl---~~~~~~~v~~~C~~~~~al~~A~~~l~~~g~~--~~~Lvv~~~~~s~~~~~~ 153 (339)
T PRK06840 79 IYIGSEHKDYPVWSSAPKIQHEIGA---KNAWAFDIMAVCASFPIALKVAKDLLYSDPSI--ENVLLVGGYRNSDLVDYD 153 (339)
T ss_pred EEeccCCCCCCCCchHHHHHHHhCC---CCcccccccccchHHHHHHHHHHHHHhcCCCc--cEEEEEeecccccccCcC
Confidence 97765 4566689999999999997 5688999999999999999999999999 755 899999999863 21
Q ss_pred CCCCC--cccccceeeeeecCCCC-cccccccccccccCcccccccCCCCCCcc-------------cCCchhHHHHH--
Q 012353 153 EGPAR--PTGGAAAVVMLVGPDAP-VAFESKLRGSHMSHAYDFYKPNLASEYPV-------------VDGKLSQTCYL-- 214 (465)
Q Consensus 153 ~~~~~--~t~GdGA~A~Ll~~~~~-~~~~~~~~~~~~~~~~df~~p~~~~~~p~-------------~dg~~s~~~y~-- 214 (465)
+.... .+|||||+|+||++++. ..+......+.......+..|.++...|. +.+...+...+
T Consensus 154 ~~~~~~~~~~GDgAaA~ll~~~~~~~~il~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (339)
T PRK06840 154 NPRTRFMFNFAAGGSAALLKKDAGKNRILGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDE 233 (339)
T ss_pred CCCeeeeccCCCceeEEEEEecCCCCceEEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHh
Confidence 11222 34799999999998764 22211111111111122333333222221 12222232222
Q ss_pred ---HHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCc
Q 012353 215 ---MALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDE 291 (465)
Q Consensus 215 ---~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 291 (465)
..+.+++++++++. |++++|||++++||++.++++.+.++| +++.++
T Consensus 234 ~~~~~~~~~i~~~L~~~------gl~~~did~~~~h~~~~~~~~~~~~~L------------------------gl~~~~ 283 (339)
T PRK06840 234 VSIPNFLKVIREALRKS------GYTPKDIDYLAILHMKRSAHIALLEGL------------------------GLTEEQ 283 (339)
T ss_pred hHHHHHHHHHHHHHHHc------CCCHHHCCEEEECCcCHHHHHHHHHHc------------------------CCCHHH
Confidence 23456666666665 899999999999999999999988888 777654
Q ss_pred cccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEe
Q 012353 292 SYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLS 371 (465)
Q Consensus 292 ~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~ 371 (465)
.+ .+ +++||++++|++++|.+++++ +++++|++|+|+++|+|+++++++++|.
T Consensus 284 ~~----------~~----------------~~~Gn~~sas~~~~L~~~~~~-~~~~~Gd~ill~~~G~G~s~~~~~l~~~ 336 (339)
T PRK06840 284 AI----------YL----------------DEYGHLGQLDQILSLHLALEQ-GKLKDGDLVVLVSAGTGYTWAATVIRWG 336 (339)
T ss_pred eE----------eH----------------HhccchhhhhHHHHHHHHHHc-CCCCCCCEEEEEEEehhhheeEEEEEec
Confidence 32 12 799999999999999999987 7788999999999999999999999997
Q ss_pred C
Q 012353 372 E 372 (465)
Q Consensus 372 ~ 372 (465)
+
T Consensus 337 ~ 337 (339)
T PRK06840 337 P 337 (339)
T ss_pred C
Confidence 5
No 19
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=3.6e-43 Score=352.65 Aligned_cols=305 Identities=19% Similarity=0.233 Sum_probs=247.6
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcCCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV 80 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 80 (465)
|.++|.++++|+|+++++++++++..+.+..++ +.|+.+|+ ++.+++++.+|+.+|++++|+++|+++++||.|++
T Consensus 1 ~~~~I~~i~~~~P~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~--~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~ 78 (318)
T TIGR00747 1 MYAGILGTGSYLPEKVLTNADLEKMVDTSDEWIVTRTGIKERR--IAADDETSSTMGFEAAKRAIENAGISKDDIDLIIV 78 (318)
T ss_pred CCCEEEEEEEECCCceecHHHHHHhcCCchHHeecccCceEEE--ECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 569999999999999999999999988776655 36777776 55789999999999999999999999999999999
Q ss_pred EeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-ccCCC---C
Q 012353 81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-YAEGP---A 156 (465)
Q Consensus 81 ~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-y~~~~---~ 156 (465)
+++++.+..|+.+.+|++.||+ +++++++++++|++++.||+.|..+|++|.. +++|||++|... ..+.. .
T Consensus 79 ~~~~~~~~~~~~a~~l~~~lGl---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~~Lvv~~e~~~~~~~~~~~~~ 153 (318)
T TIGR00747 79 ATTTPDHAFPSAACMVQAYLGI---KGIPAFDLSAACAGFIYALSVAKQYIESGKY--KTVLVVGAEKLSSTLDWTDRGT 153 (318)
T ss_pred ECCCCCCCCChHHHHHHHHhCC---CCCcEeehhhhhHHHHHHHHHHHHHHHcCCC--CEEEEEEehhhcCcCCcCCCCe
Confidence 9999888789999999999997 4578999999999999999999999999966 999999999873 22221 2
Q ss_pred CcccccceeeeeecCCCC-cccccccccccccCcccccccCC------CCCCcccCCchhHHHHHHHHHHHHHHHHHHhh
Q 012353 157 RPTGGAAAVVMLVGPDAP-VAFESKLRGSHMSHAYDFYKPNL------ASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE 229 (465)
Q Consensus 157 ~~t~GdGA~A~Ll~~~~~-~~~~~~~~~~~~~~~~df~~p~~------~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~ 229 (465)
..+|||||+|+||++++. ..+......+.......++.|.. ...+..+++...++.+++.+.+++++++++.
T Consensus 154 ~~~~GDGAaA~lL~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 232 (318)
T TIGR00747 154 CVLFGDGAGAVVLGESEDPGGIISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEAN- 232 (318)
T ss_pred EEEEecceeEEEEeecCCCCcEEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHc-
Confidence 357999999999998763 21111011111111111223321 1223345677677777888888888888776
Q ss_pred hhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhh
Q 012353 230 KLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPL 309 (465)
Q Consensus 230 ~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~ 309 (465)
++.++||++|++|+++.++++++.+.| |++.++.+ .++
T Consensus 233 -----g~~~~di~~~~~h~~~~~~~~~~~~~l------------------------gi~~~k~~---------~~~---- 270 (318)
T TIGR00747 233 -----GLDPEDIDWFVPHQANLRIIEALAKRL------------------------ELDMSQVV---------KTV---- 270 (318)
T ss_pred -----CCCHHHCCEEEECCCCHHHHHHHHHHc------------------------CCCHHHee---------ehH----
Confidence 789999999999999999999999888 78877654 234
Q ss_pred hhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEE
Q 012353 310 YDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL 370 (465)
Q Consensus 310 ~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~ 370 (465)
+++||++++|+|++|++++++ +.+.+||+|++++||+|+++++++++|
T Consensus 271 ------------~~~Gn~~sas~~~~L~~~~~~-~~~~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 271 ------------HKYGNTSAASIPLALDELLRT-GRIKPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred ------------hhhCCHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEehhheeeEEEEEC
Confidence 789999999999999999998 788999999999999999999999986
No 20
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=4.6e-43 Score=351.80 Aligned_cols=301 Identities=21% Similarity=0.226 Sum_probs=244.5
Q ss_pred eeEEeEEEEecCCceechHHHHHhcCCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEE
Q 012353 4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVG 81 (465)
Q Consensus 4 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~ 81 (465)
+++|.++++|+|+++++++++.+..+.+.+++ ..|+.+|+ ++.++++..+|+++|++++|+++|+++++||.||++
T Consensus 1 ~~~I~~i~~~lP~~~~~~~~~~~~~~~~~~~~~~~~Gi~~r~--~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~ 78 (320)
T cd00830 1 NARILGIGSYLPERVVTNDELEKRLDTSDEWIRTRTGIRERR--IADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVA 78 (320)
T ss_pred CCEEEEEEEECCCcEEcHHHHHHHcCCCHHHhhhccCceEEe--eCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 58999999999999999999999998887776 46777777 447789999999999999999999999999999999
Q ss_pred eecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc-cC---CCCC
Q 012353 82 SETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AE---GPAR 157 (465)
Q Consensus 82 T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~---~~~~ 157 (465)
|+++.+..|+.+.+|++.||+ +++.+++++++|++++.||.+|..+|++|.. ++||||++|..+. .+ ....
T Consensus 79 ~~~~~~~~~~~~~~l~~~lg~---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~vLvv~~e~~s~~~~~~~~~~~ 153 (320)
T cd00830 79 TSTPDYLFPATACLVQARLGA---KNAAAFDINAACSGFLYGLSTAAGLIRSGGA--KNVLVVGAETLSRILDWTDRSTA 153 (320)
T ss_pred cCCCCCCCCcHHHHHHHHhCC---CCCcEeeccccchHHHHHHHHHHHHHHcCCC--CEEEEEEehhhccccCcccCCce
Confidence 999888789999999999997 4788999999999999999999999999955 9999999999742 22 2234
Q ss_pred cccccceeeeeecCCCC-cccccccccccccCcccccccCCCC-----------CCcccCCchhHHHHHHHHHHHHHHHH
Q 012353 158 PTGGAAAVVMLVGPDAP-VAFESKLRGSHMSHAYDFYKPNLAS-----------EYPVVDGKLSQTCYLMALDTCYKCLC 225 (465)
Q Consensus 158 ~t~GdGA~A~Ll~~~~~-~~~~~~~~~~~~~~~~df~~p~~~~-----------~~p~~dg~~s~~~y~~~~~~~~~~~~ 225 (465)
.+|||||+|+||++++. ..+......+.......+..|.++. .+..++++..+..+.+.+.++++.++
T Consensus 154 ~~~GDgAaA~ll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 233 (320)
T cd00830 154 VLFGDGAGAVVLEATEEDPGILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEAL 233 (320)
T ss_pred EEEeccceEEEEEecCCCCcEEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHH
Confidence 78999999999998764 2211111112111111111122111 12335677777777788888888888
Q ss_pred HHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhh
Q 012353 226 SKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQL 305 (465)
Q Consensus 226 ~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~ 305 (465)
++. ++.++|||+|++||++.++++++.++| +++.++.+ .++
T Consensus 234 ~~~------g~~~~di~~~~~h~~~~~~~~~~~~~l------------------------gl~~~~~~---------~~~ 274 (320)
T cd00830 234 EKA------GLTPDDIDWFVPHQANLRIIEAVAKRL------------------------GLPEEKVV---------VNL 274 (320)
T ss_pred HHc------CCCHHHCCEEEECCCCHHHHHHHHHHh------------------------CCCHHHhh---------hhH
Confidence 876 799999999999999999999998888 77766432 344
Q ss_pred hhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeE
Q 012353 306 AKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFS 367 (465)
Q Consensus 306 ~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~ 367 (465)
+++||++++|+|++|.+++++ +++++|++|+|+++|+|+++++++
T Consensus 275 ----------------~~~Gn~~sas~~~~L~~~~~~-~~~~~G~~vll~~~G~G~~~~~~l 319 (320)
T cd00830 275 ----------------DRYGNTSAASIPLALDEAIEE-GKLKKGDLVLLLGFGAGLTWGAAL 319 (320)
T ss_pred ----------------HhhCcHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchHHhhHHhh
Confidence 799999999999999999998 788899999999999999998765
No 21
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=4.9e-42 Score=344.53 Aligned_cols=306 Identities=20% Similarity=0.221 Sum_probs=248.3
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcCCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV 80 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 80 (465)
+.|+|.++++|+|+++++++++.+..+.+..++ +.|+.+|++ +.++++..+|+.+|++++|+++|+++++||.|++
T Consensus 2 ~~v~I~ai~~~lP~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~--~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~ 79 (319)
T PRK09352 2 MYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIVTRTGIKERRI--AAPDETTSDLATEAAKKALEAAGIDPEDIDLIIV 79 (319)
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHcCCCHHHhhhhcCeEEEEe--CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 579999999999999999999999988777666 467777764 4688999999999999999999999999999999
Q ss_pred EeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccccc-CCC---C
Q 012353 81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA-EGP---A 156 (465)
Q Consensus 81 ~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~-~~~---~ 156 (465)
+|+++....|+.+.+|+..||+ .++.+++++++|++++.||..|..+|++|.. ++||||++|..+.. +.. .
T Consensus 80 ~~~~~~~~~~~~~~~i~~~lG~---~~~~~~~v~~~Casg~~al~~A~~~i~~g~~--~~vLvv~~e~~s~~~~~~~~~~ 154 (319)
T PRK09352 80 ATTTPDYAFPSTACLVQARLGA---KNAAAFDLSAACSGFVYALSTADQFIRSGAY--KNVLVIGAEKLSRIVDWTDRST 154 (319)
T ss_pred EcCCCCCCCchHHHHHHHHhCC---CCCcEeeccccchhHHHHHHHHHHHHHcCCC--CEEEEEEehhhccccCcccCCc
Confidence 9999887788999999999997 5678899999999999999999999999965 99999999987431 211 2
Q ss_pred CcccccceeeeeecCCCCcccccccccccccCcccccccCCCCC------CcccCCchhHHHHHHHHHHHHHHHHHHhhh
Q 012353 157 RPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASE------YPVVDGKLSQTCYLMALDTCYKCLCSKYEK 230 (465)
Q Consensus 157 ~~t~GdGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~~~~~------~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~ 230 (465)
..+|||||+|+||++++...+......+.......+..|..... +..++|+..++.+.+.+.+++++++++.
T Consensus 155 ~~~~gDGaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~-- 232 (319)
T PRK09352 155 CVLFGDGAGAVVLGASEEPGILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAA-- 232 (319)
T ss_pred eEEEeccceEEEEEEcCCCCeEEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHc--
Confidence 34799999999999875311110011111111112233543322 2235677667777788888888888876
Q ss_pred hhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhh
Q 012353 231 LEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLY 310 (465)
Q Consensus 231 ~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~ 310 (465)
+++++|||+|++|+++.++++.+.+.| ++|.++.. .++
T Consensus 233 ----g~~~~di~~~~~h~~~~~~~~~~~~~l------------------------g~~~~~~~---------~~~----- 270 (319)
T PRK09352 233 ----GLTPEDIDWLVPHQANLRIIDATAKKL------------------------GLPMEKVV---------VTV----- 270 (319)
T ss_pred ----CCCHHHCCEEEECCCCHHHHHHHHHHh------------------------CCCHHHhh---------hhH-----
Confidence 799999999999999999999998888 77766432 234
Q ss_pred hhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEe
Q 012353 311 DAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLS 371 (465)
Q Consensus 311 ~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~ 371 (465)
.++||++++|++++|.+++++ +.+.+|++|+++|||+|+++++++++|+
T Consensus 271 -----------~~~Gn~~~a~~~~~L~~~~~~-g~~~~Gd~vll~s~G~G~~~~~~ll~~~ 319 (319)
T PRK09352 271 -----------DKYGNTSAASIPLALDEAVRD-GRIKRGDLVLLEGFGGGLTWGAALVRWP 319 (319)
T ss_pred -----------HhhCCHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchhheeEEEEEEeC
Confidence 799999999999999999998 7788999999999999999999999984
No 22
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=6e-42 Score=351.43 Aligned_cols=312 Identities=19% Similarity=0.179 Sum_probs=235.1
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcCCCh-------hhh--hhhhcCeEEecCCC---CCCHHHHHHHHHHHHHHHCCC
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDGASK-------GKY--TIGLGQECMAFCSE---VEDVISMSLTAVTNLLEKYKI 70 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~-------~k~--~~Gig~r~~av~~~---~Ed~~~la~~Aa~~aL~~agi 70 (465)
|+|+|.++++|+|+++|+++++++..+..+ .++ .+||.+|+++.++. .++..+|+++|++++|+++|+
T Consensus 1 ~~v~I~gig~~lP~~~v~n~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~La~~A~~~aL~~agi 80 (378)
T PRK06816 1 MNVYITSTGAFLPGEPVSNDEMEAYLGLINGKPSRARRIILRNNGIKTRHYALDPEGRPTHSNAQMAAEAIRDLLDDAGF 80 (378)
T ss_pred CCeEEEeeeecCCCCccCHHHHHHHHhhccCCcHHHHHHHHHhCCCceEEEEECCCCCCCCCHHHHHHHHHHHHHHHcCC
Confidence 679999999999999999999998876421 244 47999999875432 358899999999999999999
Q ss_pred CcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc
Q 012353 71 DPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 71 ~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~ 150 (465)
++++||.||++|++++...|+.+.+|++.||+ +++.+++++++|+|++.||.+|..+|++|.. ++||||++|.++
T Consensus 81 ~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl---~~~~~~~v~~~Cas~~~al~~A~~~i~sg~~--~~vLvv~~E~~s 155 (378)
T PRK06816 81 SLGDIELLACGTSQPDQLMPGHASMVHGELGA---PPIEVVSSAGVCAAGMMALKYAYLSVKAGES--RNAVATASELAS 155 (378)
T ss_pred CHHHCCEEEEEECCCCcCChHHHHHHHhhCCC---CCCceeeecCcCHHHHHHHHHHHHHHHCCCC--CEEEEEeEccch
Confidence 99999999999999887789999999999997 4578999999999999999999999999965 999999999973
Q ss_pred c-cC----------------CCC--------CcccccceeeeeecCCCCc-c--c--ccccccccccCcc----------
Q 012353 151 Y-AE----------------GPA--------RPTGGAAAVVMLVGPDAPV-A--F--ESKLRGSHMSHAY---------- 190 (465)
Q Consensus 151 y-~~----------------~~~--------~~t~GdGA~A~Ll~~~~~~-~--~--~~~~~~~~~~~~~---------- 190 (465)
. .+ .+. ..+|||||+|+||++.+.- . + .....+++..+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~g~~~~ 235 (378)
T PRK06816 156 RWFRASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPDGLSLRIDWIDLRSYAGELPVCMYAGAEKN 235 (378)
T ss_pred hhhhhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCCCceEEEEEEeeecccccCccceecCCccC
Confidence 2 11 111 1268999999999976531 1 1 1111122211110
Q ss_pred -----cccccCCCCCCcccCCchhH--------HHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHH
Q 012353 191 -----DFYKPNLASEYPVVDGKLSQ--------TCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 191 -----df~~p~~~~~~p~~dg~~s~--------~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~ 257 (465)
..|++.. .+.+..+|+..+ +.+...+.++++.++++. |++++|||+|++||++.+|++++
T Consensus 236 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~------gl~~~DId~~v~Hq~n~~~~~~v 308 (378)
T PRK06816 236 EDGSLKGWSDYP-PEEAEAASALSLKQDVRLLNENIVVYTIKPLLELVDKR------NLDPDDIDYFLPHYSSEYFREKI 308 (378)
T ss_pred CCCCccCcccCC-HHHHHhccCchHHhHHHHHHHHhHHHHHHHHHHHHHHc------CCChhhCCEEeeCcccHHHHHHH
Confidence 1121100 011112333333 333334455555555554 89999999999999999999999
Q ss_pred HHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHH
Q 012353 258 FARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALA 337 (465)
Q Consensus 258 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~ 337 (465)
.++|--.+ .|+|+++.+. ++ .++||+++||+|++|.
T Consensus 309 ~~~l~~~~-------------------~gl~~~k~~~---------~~----------------~~~GNt~sAsipi~L~ 344 (378)
T PRK06816 309 VELLAKAG-------------------FMIPEEKWFT---------NL----------------ATVGNTGSASIYIMLD 344 (378)
T ss_pred HHHHHhcc-------------------CCCChhheEE---------ec----------------cccccccchHHHHHHH
Confidence 98871000 1677776552 44 7999999999999999
Q ss_pred HHHHhcCCCCCCCEEEEEEeccc-hheeeeEEEEe
Q 012353 338 SLIHNKHSELDGKRVVLFSYGSG-LTATMFSLKLS 371 (465)
Q Consensus 338 ~ll~~~~~~~~G~rill~syGsG-~~~~~~~~~~~ 371 (465)
+++++ +++++||+|+++++||| ++.++++++|+
T Consensus 345 ~a~~~-g~~~~Gd~vl~~~~~s~~~~~~~~~~~~~ 378 (378)
T PRK06816 345 ELLNS-GRLKPGQKILCFVPESGRFSTAFMLLTVV 378 (378)
T ss_pred HHHHc-CCCCCCCEEEEEEecccchhheeEEEEEC
Confidence 99998 88999999999999986 99999999984
No 23
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=8.1e-42 Score=350.95 Aligned_cols=309 Identities=17% Similarity=0.188 Sum_probs=236.2
Q ss_pred CceeEEeEEEEecCCceechHHHHHhc----CCChh-------hh--hhhhcCeEEecCCC-------------------
Q 012353 2 AKNVGILAMDIYFPPTCVQQEALEAHD----GASKG-------KY--TIGLGQECMAFCSE------------------- 49 (465)
Q Consensus 2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~----g~~~~-------k~--~~Gig~r~~av~~~------------------- 49 (465)
|.++.|.+|++|+|++.++|+++.+.. +.+.. ++ ++||.+|+++.+.+
T Consensus 19 ~~~~~I~gigt~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r 98 (391)
T PLN03169 19 PGKATILALGKAFPSQLVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPTIKQR 98 (391)
T ss_pred CCCeEEEEEEeeCCCeecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCCHHHH
Confidence 567999999999999999999998852 21222 12 37999999875321
Q ss_pred ----CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCc-eeEeecCcChhHHHHH
Q 012353 50 ----VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI-EGVDSTNACYGGTAAL 124 (465)
Q Consensus 50 ----~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~-~~~di~~aC~gg~~AL 124 (465)
+|.+.+||++|+++||+++|+++++||+||++|++ ++..|+++.+|+++||+ .+.+ +++|+++||+|+++||
T Consensus 99 ~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~~P~~a~~l~~~LGl--~~~~~~~~d~~~gC~g~~~aL 175 (391)
T PLN03169 99 LDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSS-EARLPGGDLYLAKQLGL--SPDVQRVMLYFLGCSGGVAGL 175 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcC-CCCCCcHHHHHHHHhCc--CCcceeeecccChhHHHHHHH
Confidence 56789999999999999999999999999999986 67799999999999998 5555 5899999999999999
Q ss_pred HHHHHHHHcCCCCCCEEEEEEeccccc--cC-----C---CCCcccccceeeeeecCCCCcccccccccccccCcccccc
Q 012353 125 FNCVNWVESSSWDGRYGLVVCTDSAVY--AE-----G---PARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYK 194 (465)
Q Consensus 125 ~~A~~~l~sg~~~~~~aLVVasD~~~y--~~-----~---~~~~t~GdGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df~~ 194 (465)
.+|.+|++++. .++||||++|.++. .. . ....+|||||+|+||++++....+......+... .+ +.
T Consensus 176 ~~A~~~~~~~~--~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~-~~-~i 251 (391)
T PLN03169 176 RVAKDIAENNP--GSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAI-QQ-FL 251 (391)
T ss_pred HHHHHHHHhCC--CCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeee-ee-Ec
Confidence 99999999994 49999999999743 11 1 1246899999999999865310000000000000 01 11
Q ss_pred cCCC---------CCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc--eeeccCCchHHHHHHHHHhhh
Q 012353 195 PNLA---------SEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD--YFVFHSPYNKLVQKSFARLLF 263 (465)
Q Consensus 195 p~~~---------~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did--~~~~H~p~~km~~~~~~~L~~ 263 (465)
|... ..+..+.|+...+...+.++.++++++++. |++++|+| +|++||++.+|++.+.++|
T Consensus 252 p~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~------gl~~~did~~~~v~Hq~n~~il~~v~~~L-- 323 (391)
T PLN03169 252 PGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKA------GLVEKDYNDLFWAVHPGGPAILNRLEKKL-- 323 (391)
T ss_pred CCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHc------CCCCCCCCcceEEecCCCHHHHHHHHHHc--
Confidence 2110 012234567666666678888888888775 78888899 9999999999999999988
Q ss_pred hhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhc
Q 012353 264 NDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNK 343 (465)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~ 343 (465)
+++.++... ...++ +++|||+++|+|+.|..++++
T Consensus 324 ----------------------gl~~ek~~~------s~~~l----------------~~~GNtsSasip~~L~~~~~~- 358 (391)
T PLN03169 324 ----------------------KLAPEKLEC------SRRAL----------------MDYGNVSSNTIVYVLEYMREE- 358 (391)
T ss_pred ----------------------CCCHHHHHH------HHHHH----------------HHhCCchHhHHHHHHHHHHHh-
Confidence 777664320 00234 899999999999999999876
Q ss_pred CCCC---CCCEEEEEEeccchheeeeEEEE
Q 012353 344 HSEL---DGKRVVLFSYGSGLTATMFSLKL 370 (465)
Q Consensus 344 ~~~~---~G~rill~syGsG~~~~~~~~~~ 370 (465)
++++ +|++++|++||+|+++++.+++|
T Consensus 359 ~~~~~~~~gd~~ll~afG~G~s~~~~ll~~ 388 (391)
T PLN03169 359 LKKKGEEDEEWGLILAFGPGITFEGILARN 388 (391)
T ss_pred hcccCCCCCcEEEEEEEcccHhHHHHHHhh
Confidence 5544 68999999999999999999886
No 24
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=4.5e-42 Score=350.67 Aligned_cols=307 Identities=19% Similarity=0.211 Sum_probs=233.5
Q ss_pred eEEeEEEEecCCceechHHHHHhcCC--Ch----------hhh--hhhhcCeEEecCC-CC-------------------
Q 012353 5 VGILAMDIYFPPTCVQQEALEAHDGA--SK----------GKY--TIGLGQECMAFCS-EV------------------- 50 (465)
Q Consensus 5 vgI~~i~~y~P~~~v~~~~l~~~~g~--~~----------~k~--~~Gig~r~~av~~-~~------------------- 50 (465)
+.|.++++|+|++.|+|+++.+..+. +. .++ ++||.+|+++.+. ++
T Consensus 2 ~~I~~~~~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (361)
T cd00831 2 ATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERNDIA 81 (361)
T ss_pred cEEEEEEEeCCCCcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchhhH
Confidence 68999999999999999999998652 21 333 4899999988642 11
Q ss_pred -CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec-CcChhHHHHHHHHH
Q 012353 51 -EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFNCV 128 (465)
Q Consensus 51 -Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~aC~gg~~AL~~A~ 128 (465)
|++.+|+++|++++|+++|+++++||+||++|+++ +..|+++.+|+++||+ .+++.+||++ +||+|++.||++|.
T Consensus 82 ~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~-~~~P~~a~~i~~~lgl--~~~~~~~dv~~~~C~~~~~al~~A~ 158 (361)
T cd00831 82 LEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTG-NPTPSLDAMLINRLGL--RPDVKRYNLGGMGCSAGAIALDLAK 158 (361)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCC-CCCCCHHHHHHHHhCC--CcccchhccccccchhHHHHHHHHH
Confidence 36899999999999999999999999999999887 6699999999999998 5579999998 89999999999999
Q ss_pred HHHHcCCCCCCEEEEEEeccccc--cCCC------CCcccccceeeeeecCCCCccc----ccccccccccCcccc----
Q 012353 129 NWVESSSWDGRYGLVVCTDSAVY--AEGP------ARPTGGAAAVVMLVGPDAPVAF----ESKLRGSHMSHAYDF---- 192 (465)
Q Consensus 129 ~~l~sg~~~~~~aLVVasD~~~y--~~~~------~~~t~GdGA~A~Ll~~~~~~~~----~~~~~~~~~~~~~df---- 192 (465)
++++++. .++||||++|..+. .... ...+|||||+|+||++++.... .....++++....+.
T Consensus 159 ~~~~~~~--~~~aLvv~~e~~s~~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 236 (361)
T cd00831 159 DLLEANP--GARVLVVSTELCSLWYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSEDAM 236 (361)
T ss_pred HHHHHCC--CCEEEEEEeecccceeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeeecCCCce
Confidence 9999995 49999999999743 1111 2467999999999998764210 001222222111110
Q ss_pred -cccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhccccc
Q 012353 193 -YKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNAS 271 (465)
Q Consensus 193 -~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~ 271 (465)
|++.. ..+....++.....+.+.+.++++.++++.+ .+++.+|||+|++||++.++++.+.++|
T Consensus 237 ~~~~~~-~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~----~g~~~~did~~~~H~~~~~i~~~v~~~l---------- 301 (361)
T cd00831 237 GWHLGE-EGLTFVLSRDVPRLVEKNLERVLRKLLARLG----IGLFKLAFDHWCVHPGGRAVLDAVEKAL---------- 301 (361)
T ss_pred EEEEEc-ceEEEEeChhHHHHHHHHHHHHHHHHhcccc----CCCccccceEEEECCCChHHHHHHHHHc----------
Confidence 11110 1111223333445555667777776665530 1688899999999999999999998887
Q ss_pred chhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCE
Q 012353 272 SVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKR 351 (465)
Q Consensus 272 ~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~r 351 (465)
+++.++.. +|+.+.+++|||++||+|++|.+++++ +++++|++
T Consensus 302 --------------gl~~~~~~----------------------~s~~~l~~~GN~~sasi~~~L~~~~~~-g~~~~Gd~ 344 (361)
T cd00831 302 --------------GLSPEDLE----------------------ASRMVLRRYGNMSSSSVLYVLAYMEAK-GRVKRGDR 344 (361)
T ss_pred --------------CCCHHHHH----------------------HHHHHHHHhCCchhccHHHHHHHHHHh-CCCCCCCE
Confidence 77765431 122223899999999999999999998 78889999
Q ss_pred EEEEEeccchheeeeEE
Q 012353 352 VVLFSYGSGLTATMFSL 368 (465)
Q Consensus 352 ill~syGsG~~~~~~~~ 368 (465)
|+|++||+|++++++++
T Consensus 345 vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 345 GLLIAFGPGFTCESAVW 361 (361)
T ss_pred EEEEEEcCCceeeeeeC
Confidence 99999999999998764
No 25
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=1.7e-39 Score=326.57 Aligned_cols=304 Identities=37% Similarity=0.514 Sum_probs=234.3
Q ss_pred eeEEeEEEEecCCceechHHHHHhcCCChhhhhhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEee
Q 012353 4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSE 83 (465)
Q Consensus 4 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~ 83 (465)
.|+|.++++|+|+++|+++++++.++.+.-...+|+.+|+++ .++++..+|+++|++++|+++|+++++||.|+++++
T Consensus 1 ~v~I~~i~~~lP~~~v~~~~~~~~~~~~~~~~~~gi~~r~~~--~~~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~ 78 (324)
T cd00827 1 DVGIEAIGAYLPRYRVDNEELAEGLGVDPGKYTTGIGQRHMA--GDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATE 78 (324)
T ss_pred CccEEEEEecCCceeecHHHHHHHhCCCcceeeeecceeEec--CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 479999999999999999999999887632335799999866 458999999999999999999999999999999999
Q ss_pred cCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccccc---CCCCCccc
Q 012353 84 TVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA---EGPARPTG 160 (465)
Q Consensus 84 s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~---~~~~~~t~ 160 (465)
++....|+.+.+|++.||+ +++.++++.++|++++.||.+|..+|++|.. ++||||++|..... ......+|
T Consensus 79 ~~~~~~~~~~~~i~~~lg~---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~vlvv~~e~~~~~~~~~~~~~~~~ 153 (324)
T cd00827 79 SPIDKGKSAATYLAELLGL---TNAEAFDLKQACYGGTAALQLAANLVESGPW--RYALVVASDIASYLLDEGSALEPTL 153 (324)
T ss_pred CCCCCCccHHHHHHHHcCC---CCCceeehhhhhHHHHHHHHHHHHHHHcCCC--CEEEEEEEHHhhhcccCCCCccccc
Confidence 9887788999999999997 4789999999999999999999999999965 99999999998542 23456889
Q ss_pred ccceeeeeecCCCC---cccccccccccccC------cccccccCC----CCCCcccCC--chhHHHHHHHHHHHHHHHH
Q 012353 161 GAAAVVMLVGPDAP---VAFESKLRGSHMSH------AYDFYKPNL----ASEYPVVDG--KLSQTCYLMALDTCYKCLC 225 (465)
Q Consensus 161 GdGA~A~Ll~~~~~---~~~~~~~~~~~~~~------~~df~~p~~----~~~~p~~dg--~~s~~~y~~~~~~~~~~~~ 225 (465)
||||+|+||++++. ..+......+.... ..++..+.+ .......++ ......+.+.+.++++..+
T Consensus 154 gdgaaA~ll~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (324)
T cd00827 154 GDGAAAMLVSRNPGILAAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKAL 233 (324)
T ss_pred cCceEEEEEecCcccccCCceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHH
Confidence 99999999998864 22221111111111 111111100 000011233 2233445566677777766
Q ss_pred HHhhhhhcCCCCCCCCceeeccCCch-HHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHh
Q 012353 226 SKYEKLEGKQFSLSNADYFVFHSPYN-KLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQ 304 (465)
Q Consensus 226 ~~~~~~~~~~~~~~did~~~~H~p~~-km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~ 304 (465)
++. +++ +||++|++||++. ++++.+.++| +++.++...++. .+
T Consensus 234 ~~~------~~~-~~i~~~~~h~~~~~~~~~~~~~~l------------------------~~~~~~~~~~~~-----~~ 277 (324)
T cd00827 234 DRA------GLS-EDIDYFVPHQPNGKKILEAVAKKL------------------------GGPPEKASQTRW-----IL 277 (324)
T ss_pred HHc------ccc-cccceeeccCchHHHHHHHHHHHc------------------------cchHhhhccchh-----hH
Confidence 665 677 9999999999999 9999998888 454433321100 12
Q ss_pred hhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeE
Q 012353 305 LAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFS 367 (465)
Q Consensus 305 ~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~ 367 (465)
+ +++||+++||+|++|.+++++ +++.+|++|+++|+|+|+++++++
T Consensus 278 ~----------------~~~Gn~~sa~~~~~L~~~~~~-~~~~~Gd~vl~~~~G~G~~~~~~~ 323 (324)
T cd00827 278 L----------------RRVGNMYAASILLGLASLLES-GKLKAGDRVLLFSYGSGFTAEAFV 323 (324)
T ss_pred H----------------HHhCchHHHHHHHHHHHHHhc-CCCCCCCEEEEEEeccchhheecc
Confidence 3 899999999999999999998 788899999999999999998875
No 26
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=5.4e-39 Score=330.66 Aligned_cols=309 Identities=19% Similarity=0.250 Sum_probs=225.3
Q ss_pred eeEEeEEEEecCCceechHHHHHhc-C--CChh---------hh--hhhhcCeEEecCCC--------------------
Q 012353 4 NVGILAMDIYFPPTCVQQEALEAHD-G--ASKG---------KY--TIGLGQECMAFCSE-------------------- 49 (465)
Q Consensus 4 ~vgI~~i~~y~P~~~v~~~~l~~~~-g--~~~~---------k~--~~Gig~r~~av~~~-------------------- 49 (465)
.+.|.++++|+|+++|+|+++++.. . .+.+ ++ ++||.+|+++..+.
T Consensus 22 ~~~I~gigt~~P~~~v~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r~ 101 (399)
T PLN03171 22 LAAVLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPSLDARL 101 (399)
T ss_pred CcEEEEEEeeCCCcccCHHHHHHHHHHHhcccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCCHHHHH
Confidence 4789999999999999999998873 2 1112 34 47999999764320
Q ss_pred ---CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCc-eeEeecCcChhHHHHHH
Q 012353 50 ---VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI-EGVDSTNACYGGTAALF 125 (465)
Q Consensus 50 ---~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~-~~~di~~aC~gg~~AL~ 125 (465)
.|.+.+||++|++++|+++|+++++||+||++|+|+++ .|+++.+|+++||+ ...+ +++++.+||+|+++||.
T Consensus 102 ~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~-~P~~a~~v~~~LGl--~~~~~~~~~~~~gC~g~~~aL~ 178 (399)
T PLN03171 102 DIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH-IPGVDFRLVPLLGL--RPSVRRTMLHLNGCFAGAAALR 178 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC-CCchHHHHHHHhCC--CcccceeeccCCccHHHHHHHH
Confidence 04799999999999999999999999999999999986 89999999999998 4443 36788889999999999
Q ss_pred HHHHHHHcCCCCCCEEEEEEeccccc-cCCCC---------CcccccceeeeeecCCCCc----cccccccccccc----
Q 012353 126 NCVNWVESSSWDGRYGLVVCTDSAVY-AEGPA---------RPTGGAAAVVMLVGPDAPV----AFESKLRGSHMS---- 187 (465)
Q Consensus 126 ~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~~---------~~t~GdGA~A~Ll~~~~~~----~~~~~~~~~~~~---- 187 (465)
+|.+|++++.. ++||||++|.++. .++++ ..+|||||+|+||++++.. .++ +....+.
T Consensus 179 ~A~~li~~~~~--~~vLVv~~e~~s~~~~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~--l~~~~~~~~p~ 254 (399)
T PLN03171 179 LAKDLAENNRG--ARVLVVAAEITLLLFNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFE--IVSAAQAIIPE 254 (399)
T ss_pred HHHHHHHhCCC--CeEEEEEEeccccccCCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceE--EEEeeeEEecC
Confidence 99999999954 9999999999742 22222 2589999999999986431 011 1111110
Q ss_pred --CcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhh---hhcCCCCCCCCceeeccCCchHHHHHHHHHhh
Q 012353 188 --HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEK---LEGKQFSLSNADYFVFHSPYNKLVQKSFARLL 262 (465)
Q Consensus 188 --~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~---~~~~~~~~~did~~~~H~p~~km~~~~~~~L~ 262 (465)
+...+..+.++ ++++++.....+.+.+.++.++++... ....++..+|++++ +||++.+|++.+.++|
T Consensus 255 ~~~~~~~~~~~~g-----~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~-~Hq~~~~il~~v~~~L- 327 (399)
T PLN03171 255 SDDAINMHFTEGG-----LDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWA-VHPGSSAILDQVDAAL- 327 (399)
T ss_pred CchheEEEEEcCC-----ceEEECchhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEE-EcCCcHHHHHHHHHHc-
Confidence 11111112211 233444333334444444444433210 01235778899887 5999999999999988
Q ss_pred hhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHh
Q 012353 263 FNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHN 342 (465)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~ 342 (465)
|++.++.... ..++ +++|||+++|+|++|..++++
T Consensus 328 -----------------------gl~~ek~~~s------~~~l----------------~~yGNtssaSip~~L~~~~~~ 362 (399)
T PLN03171 328 -----------------------GLEPEKLAAS------RRVL----------------SDYGNMFGATVIFALDELRRQ 362 (399)
T ss_pred -----------------------CCCHHHhHHH------HHHH----------------HHhCcchhhhHHHHHHHHHhh
Confidence 7877653210 0134 899999999999999999977
Q ss_pred cCC--CCCC---CEEEEEEeccchheeeeEEEEeC
Q 012353 343 KHS--ELDG---KRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 343 ~~~--~~~G---~rill~syGsG~~~~~~~~~~~~ 372 (465)
++ +++| ++|+|++||+|++|++++++|..
T Consensus 363 -~~~~~~~G~~~d~vll~~fG~Glt~~~~ll~~~~ 396 (399)
T PLN03171 363 -MEEAAAAGAWPELGVMMAFGPGLTVDAMLLHASG 396 (399)
T ss_pred -HhhcCCCCCCcceEEEEEEcccHHHHHHHhhccc
Confidence 43 4677 99999999999999999999864
No 27
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=5.8e-38 Score=321.68 Aligned_cols=308 Identities=17% Similarity=0.229 Sum_probs=225.3
Q ss_pred eEEeEEEEecCCceechHHHHHhcC----C-C-h--h-hh-----hhhhcCeEEecCCC--C------------------
Q 012353 5 VGILAMDIYFPPTCVQQEALEAHDG----A-S-K--G-KY-----TIGLGQECMAFCSE--V------------------ 50 (465)
Q Consensus 5 vgI~~i~~y~P~~~v~~~~l~~~~g----~-~-~--~-k~-----~~Gig~r~~av~~~--~------------------ 50 (465)
+.|.+|++.+|++.++|+++.++.. . + + . ++ ..||..|++.+.+. +
T Consensus 17 ~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~~ 96 (393)
T PLN03172 17 ATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQD 96 (393)
T ss_pred eEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHHHHHH
Confidence 6799999999999999999877652 1 1 1 1 12 37999999876310 0
Q ss_pred ---CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCce-eEeecCcChhHHHHHHH
Q 012353 51 ---EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE-GVDSTNACYGGTAALFN 126 (465)
Q Consensus 51 ---Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~-~~di~~aC~gg~~AL~~ 126 (465)
+...+||++|+++||+++|+++++||+||++|+|+.+ .|+++.+|+++||+ .+.+. .++++.||+|++.||.+
T Consensus 97 ~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~-~P~~a~~l~~~LGl--~~~~~~~~~~~~gC~g~~~aL~~ 173 (393)
T PLN03172 97 MVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGL--KPSVKRFMMYQQGCFAGGTVLRL 173 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-CchHHHHHHHHhCC--CCCceEEeeeCCchHHHHHHHHH
Confidence 1246999999999999999999999999999999876 89999999999998 56664 57889999999999999
Q ss_pred HHHHHHcCCCCCCEEEEEEecccc--ccCC--C------CCcccccceeeeeecCCCCcccc-c--cccccc------cc
Q 012353 127 CVNWVESSSWDGRYGLVVCTDSAV--YAEG--P------ARPTGGAAAVVMLVGPDAPVAFE-S--KLRGSH------MS 187 (465)
Q Consensus 127 A~~~l~sg~~~~~~aLVVasD~~~--y~~~--~------~~~t~GdGA~A~Ll~~~~~~~~~-~--~~~~~~------~~ 187 (465)
|.++++++ ++++||||++|.++ +.+. . +..+|||||+|+||++++...++ + .+.++. ++
T Consensus 174 A~~~~~~~--~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~ 251 (393)
T PLN03172 174 AKDLAENN--AGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSD 251 (393)
T ss_pred HHHHHHcC--CCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCc
Confidence 99999999 55999999999985 2221 1 24679999999999986431110 0 111121 11
Q ss_pred Ccccc-cccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhh
Q 012353 188 HAYDF-YKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDF 266 (465)
Q Consensus 188 ~~~df-~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~ 266 (465)
+.+.+ .+.. +..+. .. +.......+.++.+++.++++. +++..|+++|++||++.+|++.+.++|
T Consensus 252 ~~~~~~i~~~-G~~~~-l~-~~vp~~~~~~i~~~~~~~L~~~------gl~~~di~~~~~Hqgg~~Il~~v~~~L----- 317 (393)
T PLN03172 252 GAIDGHLREV-GLTFH-LL-KDVPGLISKNIEKSLVEAFAPI------GINDWNSIFWIAHPGGPAILDQVEIKL----- 317 (393)
T ss_pred ccccceEEcC-CcEEE-Ee-chHHHHHHHHHHHHHHHHhhhc------CCCccccceEEecCCcHHHHHHHHHHc-----
Confidence 11111 1111 11100 11 2222333355666666665554 778899999999999999999999998
Q ss_pred cccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHh---c
Q 012353 267 MRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHN---K 343 (465)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~---~ 343 (465)
++++++. .+|..+.+++|||+|+|+++.|..+++. .
T Consensus 318 -------------------gl~~~~~----------------------~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~ 356 (393)
T PLN03172 318 -------------------DLKEEKL----------------------RATRHVLSDYGNMSSACVLFILDEMRKKSIEE 356 (393)
T ss_pred -------------------CCCHHHH----------------------HHHHHHHHHhCccHHhHHHHHHHHHHhhhhhc
Confidence 6766542 2222233899999999999999998742 1
Q ss_pred CCCCCC---CEEEEEEeccchheeeeEEEEeC
Q 012353 344 HSELDG---KRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 344 ~~~~~G---~rill~syGsG~~~~~~~~~~~~ 372 (465)
+++++| ++++|++||+|+++++++++|.+
T Consensus 357 g~~~~G~~~~~~ll~afGpG~t~~~~ll~~~~ 388 (393)
T PLN03172 357 GKGSTGEGLEWGVLFGFGPGLTVETVVLHSVP 388 (393)
T ss_pred CCCCCCCCcceEEEEEeCCcceeeeeeeEecc
Confidence 455556 88999999999999999999964
No 28
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=3.7e-38 Score=323.20 Aligned_cols=307 Identities=17% Similarity=0.211 Sum_probs=220.3
Q ss_pred eEEeEEEEecCCceechHHHHHhcC------CCh---hhh-----hhhhcCeEEecCCC---------------------
Q 012353 5 VGILAMDIYFPPTCVQQEALEAHDG------ASK---GKY-----TIGLGQECMAFCSE--------------------- 49 (465)
Q Consensus 5 vgI~~i~~y~P~~~v~~~~l~~~~g------~~~---~k~-----~~Gig~r~~av~~~--------------------- 49 (465)
+.|.+|++.+|+++++|+++.++.. ..+ .++ +.||.+|++.++..
T Consensus 16 ~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~~r~~ 95 (389)
T PLN03168 16 ACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLNVRHD 95 (389)
T ss_pred eEEEEEeccCCCcccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHHHHHH
Confidence 6799999999999999999877652 112 123 47999999876331
Q ss_pred --CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCc-eeEeecCcChhHHHHHHH
Q 012353 50 --VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI-EGVDSTNACYGGTAALFN 126 (465)
Q Consensus 50 --~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~-~~~di~~aC~gg~~AL~~ 126 (465)
.+.+.+||++|+++||+++|++++|||+||++|+|+. ..|+++.+|+++||+ .+.+ +++|++.||+||++||.+
T Consensus 96 ~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~-~~Ps~a~~l~~~LGl--~~~~~r~~d~~~gC~g~~~aL~~ 172 (389)
T PLN03168 96 IVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGV-NMPGADHALAKLLGL--KPTVKRVMMYQTGCFGGASVLRV 172 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC-CCccHHHHHHHHhCc--CCcceeeeeeCCccHHHHHHHHH
Confidence 0146899999999999999999999999999999995 489999999999998 4544 589999999999999999
Q ss_pred HHHHHHcCCCCCCEEEEEEeccccc--cCC--------CCCcccccceeeeeecCCCCcccccccccccccCcccccccC
Q 012353 127 CVNWVESSSWDGRYGLVVCTDSAVY--AEG--------PARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPN 196 (465)
Q Consensus 127 A~~~l~sg~~~~~~aLVVasD~~~y--~~~--------~~~~t~GdGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~ 196 (465)
|.++++++ ++++||||++|.++. .+. ....+|||||+|+||++++.-..+.+....+... ....|+
T Consensus 173 A~~~i~~~--~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~--~~~~p~ 248 (389)
T PLN03168 173 AKDLAENN--KGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAG--ETILPE 248 (389)
T ss_pred HHHHHHhC--CCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeee--eEEEcC
Confidence 99999999 459999999999843 211 1246799999999999864211011111111110 011121
Q ss_pred CCC--CCcc-cCC------chhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhc
Q 012353 197 LAS--EYPV-VDG------KLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFM 267 (465)
Q Consensus 197 ~~~--~~p~-~dg------~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~ 267 (465)
... .+.+ ..| +.......+.+..+++.++++. +....|+++|++||++.++++.+.++|
T Consensus 249 s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~------~~~~~d~~~~v~Hqgg~~Il~~v~~~L------ 316 (389)
T PLN03168 249 SDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCV------GSPDWNEMFWAVHPGGPAILDQVEAKL------ 316 (389)
T ss_pred CCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhc------CCCccccceEEecCCcHHHHHHHHHHc------
Confidence 100 0011 111 1111222234444444444443 455567889999999999999999998
Q ss_pred ccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCC
Q 012353 268 RNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSEL 347 (465)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~ 347 (465)
+++.++...+ ...+ +++|||+|+|+++.|..++++ +++
T Consensus 317 ------------------gl~~ek~~~s------~~vl----------------~~yGNtSSaSv~~vL~~~~~~--~~~ 354 (389)
T PLN03168 317 ------------------KLTKDKMQGS------RDIL----------------SEFGNMSSASVLFVLDQIRQR--SVK 354 (389)
T ss_pred ------------------CCCHHHHHHH------HHHH----------------HHhCccHhhhHHHHHHHHHHH--Hhh
Confidence 7777653211 0123 899999999999999998764 222
Q ss_pred C--------CCEEEEEEeccchheeeeEEEEeC
Q 012353 348 D--------GKRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 348 ~--------G~rill~syGsG~~~~~~~~~~~~ 372 (465)
+ |++++|++||+|+++++++++|..
T Consensus 355 ~g~~~~~~g~~~~ll~afGpG~t~~~~llr~~~ 387 (389)
T PLN03168 355 MGASTLGEGSEFGFFIGFGPGLTLEVLVLRAAA 387 (389)
T ss_pred cCCCCCCCCccEEEEEEEcchhhhhhhhheecc
Confidence 3 289999999999999999999864
No 29
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=5.5e-38 Score=322.94 Aligned_cols=306 Identities=17% Similarity=0.236 Sum_probs=227.2
Q ss_pred eEEeEEEEecCCceechHHHHHhcC-------CCh-h-hh-----hhhhcCeEEecCCC----C----------------
Q 012353 5 VGILAMDIYFPPTCVQQEALEAHDG-------ASK-G-KY-----TIGLGQECMAFCSE----V---------------- 50 (465)
Q Consensus 5 vgI~~i~~y~P~~~v~~~~l~~~~g-------~~~-~-k~-----~~Gig~r~~av~~~----~---------------- 50 (465)
..|.+|++.+|++.++|+++.++.. .+. . ++ ..||..|++.+.+. +
T Consensus 21 ~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~~ 100 (401)
T PLN03170 21 ATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQD 100 (401)
T ss_pred eEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHHHHHH
Confidence 6799999999999999999877652 111 1 23 47999999866311 0
Q ss_pred ---CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCc-eeEeecCcChhHHHHHHH
Q 012353 51 ---EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI-EGVDSTNACYGGTAALFN 126 (465)
Q Consensus 51 ---Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~-~~~di~~aC~gg~~AL~~ 126 (465)
+...+||++|+++||+++|++++|||+||++|+|+.+ .|+++.+|+++||+ .+.+ +++|+++||+|++.||.+
T Consensus 101 ~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~-~Ps~a~~l~~~LGl--~~~~~r~~d~~~gC~G~~~aL~~ 177 (401)
T PLN03170 101 IVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKMLGL--RPSVNRLMMYQQGCFAGGTVLRV 177 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCC-CChHHHHHHHHhCc--CcccHHHHhhcChhHHHHHHHHH
Confidence 1256799999999999999999999999999999976 99999999999998 4554 589999999999999999
Q ss_pred HHHHHHcCCCCCCEEEEEEeccccc--cCCC--------CCcccccceeeeeecCCCCccccc---ccccccccCccccc
Q 012353 127 CVNWVESSSWDGRYGLVVCTDSAVY--AEGP--------ARPTGGAAAVVMLVGPDAPVAFES---KLRGSHMSHAYDFY 193 (465)
Q Consensus 127 A~~~l~sg~~~~~~aLVVasD~~~y--~~~~--------~~~t~GdGA~A~Ll~~~~~~~~~~---~~~~~~~~~~~df~ 193 (465)
|.++++++ ++++||||++|.++. .+.. ...+|||||+|+||++++.-.+.. .+.... ...
T Consensus 178 A~~l~~~~--~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~-----~~~ 250 (401)
T PLN03170 178 AKDLAENN--RGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSAS-----QTI 250 (401)
T ss_pred HHHHHHcC--CCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeecc-----ceE
Confidence 99999999 559999999999742 1111 136899999999999865311110 011110 011
Q ss_pred ccCCCC--CCc-ccCC------chhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhh
Q 012353 194 KPNLAS--EYP-VVDG------KLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFN 264 (465)
Q Consensus 194 ~p~~~~--~~p-~~dg------~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~ 264 (465)
.|.... .+. ..+| +.......+.+..++++++++. |+..+|+++|++||++.+|++.+.++|
T Consensus 251 ~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~------gl~~~di~~~v~Hqgg~~il~~v~~~L--- 321 (401)
T PLN03170 251 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPL------GITDYNSIFWVAHPGGPAILDQVEAKV--- 321 (401)
T ss_pred ecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhc------CCCccccCeEEecCCcHHHHHHHHHHc---
Confidence 221100 000 1122 2233344456666677766665 788899999999999999999999988
Q ss_pred hhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHH---
Q 012353 265 DFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIH--- 341 (465)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~--- 341 (465)
+++.++. .+|+.+.+++|||+|+|+++.|..+++
T Consensus 322 ---------------------gl~~~~~----------------------~~s~~~l~~~GNtsSasv~~vL~~~~~~~~ 358 (401)
T PLN03170 322 ---------------------GLEKERM----------------------RATRHVLSEYGNMSSACVLFILDEMRKRSA 358 (401)
T ss_pred ---------------------CCChHHH----------------------HHHHHHHHHhCccHHhHHHHHHHHHHHhHh
Confidence 7776542 122223389999999999999999984
Q ss_pred hcCCCCCC---CEEEEEEeccchheeeeEEEEeC
Q 012353 342 NKHSELDG---KRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 342 ~~~~~~~G---~rill~syGsG~~~~~~~~~~~~ 372 (465)
+.+++++| ++++|++||+|+++++++++|.+
T Consensus 359 ~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~~~ 392 (401)
T PLN03170 359 EDGQATTGEGFDWGVLFGFGPGLTVETVVLHSVP 392 (401)
T ss_pred hcCCCCCCCCccEEEEEEeCchHhHHhHHheecc
Confidence 22566677 89999999999999999999965
No 30
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.6e-37 Score=316.76 Aligned_cols=303 Identities=16% Similarity=0.129 Sum_probs=227.6
Q ss_pred eeEEeEEEEecCCceechHHHHHhcC------------------------CChhhh--hhhhcCeEEecCCC--------
Q 012353 4 NVGILAMDIYFPPTCVQQEALEAHDG------------------------ASKGKY--TIGLGQECMAFCSE-------- 49 (465)
Q Consensus 4 ~vgI~~i~~y~P~~~v~~~~l~~~~g------------------------~~~~k~--~~Gig~r~~av~~~-------- 49 (465)
+|+|.++++|+|+++|+|+++++.++ .+.+++ .+||..|+++....
T Consensus 2 ~~~I~~~g~~lP~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~ 81 (372)
T PRK07515 2 NVVISGTGLYTPPESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPDRMR 81 (372)
T ss_pred CcEEEEEEeecCCccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCcccccC
Confidence 68999999999999999999987632 123455 47999999764210
Q ss_pred --------C--CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChh
Q 012353 50 --------V--EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYG 119 (465)
Q Consensus 50 --------~--Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~g 119 (465)
. ....+|++.|++++|+++|+++++||.|+++|+++.+..|+.+..|++.||+ . +.+++++++|+|
T Consensus 82 ~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl--~--~~~~~v~~aCas 157 (372)
T PRK07515 82 PRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGI--E--GFAFDMNVACSS 157 (372)
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCC--C--CcEEEecchhHH
Confidence 1 1346899999999999999999999999999998888899999999999997 2 568999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEEEecccc-ccC---CCCCcccccceeeeeecCCCCcc--cccccccccc-cCcccc
Q 012353 120 GTAALFNCVNWVESSSWDGRYGLVVCTDSAV-YAE---GPARPTGGAAAVVMLVGPDAPVA--FESKLRGSHM-SHAYDF 192 (465)
Q Consensus 120 g~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-y~~---~~~~~t~GdGA~A~Ll~~~~~~~--~~~~~~~~~~-~~~~df 192 (465)
++.||..|..+|++|.. ++||||++|..+ +.+ .....+|||||+|+||++.+... -.....++.. .+..+.
T Consensus 158 g~~al~~A~~~i~~g~~--~~vLvv~~e~~s~~~~~~d~~~~~lfGDgAaA~vL~~~~~~~~~~~~~il~~~~~~~~~~~ 235 (372)
T PRK07515 158 ATFGIQTAANAIRSGSA--RRVLVVNPEICSGHLNFRDRDSHFIFGDVATAVIVERADTATSAGGFEILGTRLFTQFSNN 235 (372)
T ss_pred HHHHHHHHHHHHHcCCC--CEEEEEeeecccccccccCCCCCEEecCccEEEEEeeccccccCCCceEEEEEeecccccc
Confidence 99999999999999965 999999999874 222 22347899999999999864210 0000111110 000011
Q ss_pred c----------ccCC---CCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHH
Q 012353 193 Y----------KPNL---ASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFA 259 (465)
Q Consensus 193 ~----------~p~~---~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~ 259 (465)
+ .+.. ...+..++|...++.+.+.+.++++.++++. |++++|||+|++||++.+|.+.+.+
T Consensus 236 ~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~------gl~~~dId~~~~Hq~~~~~~d~~~~ 309 (372)
T PRK07515 236 IRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAEN------GLTPADVKRFWLHQANINMNQLIGK 309 (372)
T ss_pred eecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHc------CCCHHHCCEEEECCCCHHHHHHHHH
Confidence 1 1100 0001124676666677777888888887775 7999999999999999999999887
Q ss_pred HhhhhhhcccccchhhHhhhccCCCCCC--CCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHH
Q 012353 260 RLLFNDFMRNASSVDEAAKEKLGPFSTL--SGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALA 337 (465)
Q Consensus 260 ~L~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~ 337 (465)
+++ ++ +.++. +.++ +++|||++||+|++|.
T Consensus 310 ~ll-----------------------g~~~~~~~~---------~~~~----------------~~~GNt~sasi~~~L~ 341 (372)
T PRK07515 310 KVL-----------------------GRDATPEEA---------PVIL----------------DEYANTSSAGSIIAFH 341 (372)
T ss_pred Hhc-----------------------cCCCChhhc---------eEeH----------------HhcCCchhhHHHHHHH
Confidence 742 32 22221 1123 8999999999999999
Q ss_pred HHHHhcCCCCCCCEEEEEEeccchheeeeEEE
Q 012353 338 SLIHNKHSELDGKRVVLFSYGSGLTATMFSLK 369 (465)
Q Consensus 338 ~ll~~~~~~~~G~rill~syGsG~~~~~~~~~ 369 (465)
.+++ ++++||+|+|++||+|+++++++++
T Consensus 342 ~~~~---~~~~Gd~vll~~~G~G~~~~~~ll~ 370 (372)
T PRK07515 342 KHSD---DLAAGDLGVICSFGAGYSIGSVIVR 370 (372)
T ss_pred HHhc---cCCCCCEEEEEEecccHHHHHHHhc
Confidence 9853 4689999999999999999988765
No 31
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=4e-37 Score=315.34 Aligned_cols=308 Identities=18% Similarity=0.244 Sum_probs=226.0
Q ss_pred eEEeEEEEecCCceechHHHHHhcC------CChh---hh-----hhhhcCeEEecCCC----C----------------
Q 012353 5 VGILAMDIYFPPTCVQQEALEAHDG------ASKG---KY-----TIGLGQECMAFCSE----V---------------- 50 (465)
Q Consensus 5 vgI~~i~~y~P~~~v~~~~l~~~~g------~~~~---k~-----~~Gig~r~~av~~~----~---------------- 50 (465)
+.|.+|++.+|++.++|+++.++.. ..+. ++ ..||..|++.+++. .
T Consensus 17 ~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~~ 96 (391)
T PLN03173 17 ATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLDARQD 96 (391)
T ss_pred eEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHHHHHH
Confidence 6799999999999999999877652 1221 22 47999999876321 0
Q ss_pred ---CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCc-eeEeecCcChhHHHHHHH
Q 012353 51 ---EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI-EGVDSTNACYGGTAALFN 126 (465)
Q Consensus 51 ---Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~-~~~di~~aC~gg~~AL~~ 126 (465)
+.+.+||++|+++||+++|++++|||+||++|+|+.+ .|+++.+|+++||+ .+.+ ++++++.||+|++.||.+
T Consensus 97 ~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~-~P~~a~~l~~~LGl--~~~~~~~~~~~~gC~g~~~aL~~ 173 (391)
T PLN03173 97 MVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGL--RSSVKRFMMYQQGCFAGGTVLRL 173 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-ccHHHHHHHHHhCC--CccceeeehhcCccHHHHHHHHH
Confidence 1256999999999999999999999999999999976 89999999999998 4555 467889999999999999
Q ss_pred HHHHHHcCCCCCCEEEEEEecccc--ccCCC--------CCcccccceeeeeecCCCCccccc---cccccc------cc
Q 012353 127 CVNWVESSSWDGRYGLVVCTDSAV--YAEGP--------ARPTGGAAAVVMLVGPDAPVAFES---KLRGSH------MS 187 (465)
Q Consensus 127 A~~~l~sg~~~~~~aLVVasD~~~--y~~~~--------~~~t~GdGA~A~Ll~~~~~~~~~~---~~~~~~------~~ 187 (465)
|.+|++++ ++++||||++|.++ +.+.. ...+|||||+|+||++++...+.. .+.++. ++
T Consensus 174 A~~~~~~~--~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~ 251 (391)
T PLN03173 174 AKDLAENN--KGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSD 251 (391)
T ss_pred HHHHHHhC--CCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCc
Confidence 99999999 56999999999975 32221 236799999999999754321110 011111 11
Q ss_pred Ccccc-cccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhh
Q 012353 188 HAYDF-YKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDF 266 (465)
Q Consensus 188 ~~~df-~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~ 266 (465)
+.+.+ .++. +..+. .. +.......+.++.+++.++++. |++.+|+|+|++||++.++++.+.++|
T Consensus 252 ~~~~~~i~~~-G~~~~-l~-~~vp~~~~~~~~~~i~~~L~~~------gl~~~di~~~v~Hqgg~~Il~~v~~~L----- 317 (391)
T PLN03173 252 GAIDGHLREV-GLTFH-LL-KDVPGLISKNVEKSLTEAFKPL------GISDWNSLFWIAHPGGPAILDQVEAKL----- 317 (391)
T ss_pred cceeeEEEcC-ceEEE-Ee-cHHHHHHHHHHHHHHHHHHHhc------CCCccccCeEEECCCcHHHHHHHHHHc-----
Confidence 11111 1111 11100 11 2233334456677777777665 788899999999999999999999988
Q ss_pred cccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHh---c
Q 012353 267 MRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHN---K 343 (465)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~---~ 343 (465)
++++++.. +|+...+++|||+|+|+++.|..++++ .
T Consensus 318 -------------------gL~~ekl~----------------------~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~ 356 (391)
T PLN03173 318 -------------------ALKPEKLR----------------------ATRHVLSEYGNMSSACVLFILDEMRKKSAED 356 (391)
T ss_pred -------------------CCChHHHH----------------------HHHHHHHHhCcchhhHHHHHHHHHHHhhhhc
Confidence 77766432 122223899999999999999999963 1
Q ss_pred CCCC--CC-CEEEEEEeccchheeeeEEEEeC
Q 012353 344 HSEL--DG-KRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 344 ~~~~--~G-~rill~syGsG~~~~~~~~~~~~ 372 (465)
+.+. +| +++++++||+|+++++++++|..
T Consensus 357 ~~~~~g~~~~~~l~~afGpG~t~e~~ll~~~~ 388 (391)
T PLN03173 357 GLKSTGEGLEWGVLFGFGPGLTVETVVLHSVA 388 (391)
T ss_pred CCCCCCCCcceEEEEEeCchHHHHHHHHhhcc
Confidence 2222 33 88999999999999999998754
No 32
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=6.8e-36 Score=311.27 Aligned_cols=315 Identities=17% Similarity=0.248 Sum_probs=225.2
Q ss_pred CceeEEeEEEEecCCc--eechHHHHHhc---C-CChh------hh--hhhhcCeEEecCC------C-------CCCHH
Q 012353 2 AKNVGILAMDIYFPPT--CVQQEALEAHD---G-ASKG------KY--TIGLGQECMAFCS------E-------VEDVI 54 (465)
Q Consensus 2 ~~~vgI~~i~~y~P~~--~v~~~~l~~~~---g-~~~~------k~--~~Gig~r~~av~~------~-------~Ed~~ 54 (465)
|..|++...++|.|+. +++.+.+.+.. | .+++ |+ +.|||++ ..+|+ + .|.+.
T Consensus 95 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~-t~~p~~~~~~~~~~~~~~~~~ea~ 173 (502)
T PLN02377 95 PRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGED-TYVPEAMHYIPPRPSMAAAREEAE 173 (502)
T ss_pred CCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCc-cccCchhccCCccchHHHHHHHHH
Confidence 6789999999999875 57888776553 3 3333 22 4799984 33441 1 24588
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec-CcChhHHHHHHHHHHHHHc
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFNCVNWVES 133 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~aC~gg~~AL~~A~~~l~s 133 (465)
+++..|+++||+++|++|+|||.||+ |+|+....|++++.|+++||+ .+++.+||++ +||+||+.||.+|.+++++
T Consensus 174 ~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGl--r~~v~afdL~gmGCsggl~aL~lA~~ll~~ 250 (502)
T PLN02377 174 QVMFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKL--RGNIRSFNLGGMGCSAGVIAVDLAKDMLQV 250 (502)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCC--CCCCeEEecccchhhHHHHHHHHHHHHHHc
Confidence 99999999999999999999999987 899998999999999999998 6689999999 7999999999999999999
Q ss_pred CCCCCCEEEEEEeccccc----cCCCC----CcccccceeeeeecCCCCcc----ccc-ccccccc--c-Ccccc-ccc-
Q 012353 134 SSWDGRYGLVVCTDSAVY----AEGPA----RPTGGAAAVVMLVGPDAPVA----FES-KLRGSHM--S-HAYDF-YKP- 195 (465)
Q Consensus 134 g~~~~~~aLVVasD~~~y----~~~~~----~~t~GdGA~A~Ll~~~~~~~----~~~-~~~~~~~--~-~~~df-~~p- 195 (465)
+ ++++||||++|..+. .+... ..+|||||+|+||++.+... +.. ++..++. . +.++. +.|
T Consensus 251 ~--~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~i~~~~ 328 (502)
T PLN02377 251 H--RNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCVYQEQ 328 (502)
T ss_pred C--CCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccceeeecc
Confidence 9 559999999999732 22222 36799999999999743210 000 1122221 1 12222 222
Q ss_pred --CCCC------CCcccCCchhHHHHHHHH---------------HHHHHHHHHHhhhhhcCC-CCCCCCceeeccCCch
Q 012353 196 --NLAS------EYPVVDGKLSQTCYLMAL---------------DTCYKCLCSKYEKLEGKQ-FSLSNADYFVFHSPYN 251 (465)
Q Consensus 196 --~~~~------~~p~~dg~~s~~~y~~~~---------------~~~~~~~~~~~~~~~~~~-~~~~did~~~~H~p~~ 251 (465)
.++. +.|.+.|+. ...++..+ ...+....++. ++..+ ...+|||+||+||++.
T Consensus 329 d~~G~~g~~ls~dl~~v~g~~-l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~--l~~~~p~~~~didhf~iHqggr 405 (502)
T PLN02377 329 DDAGKTGVSLSKDLMAIAGEA-LKTNITTLGPLVLPISEQLLFFATLVVKKLFNKK--MKPYIPDFKLAFDHFCIHAGGR 405 (502)
T ss_pred ccCCCCCCCCCcchhhHhhHH-HHHHHHHhcccccchHHHHHHHHHHHHHHHHHHH--HhhccCCcHhhcCEEEECCCCH
Confidence 2221 112233221 11111100 01111111111 01111 3468999999999999
Q ss_pred HHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhh
Q 012353 252 KLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTAS 331 (465)
Q Consensus 252 km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS 331 (465)
++++.+.++| ++++++ +|+...++ +++|||+|+|
T Consensus 406 ~IId~v~k~L------------------------gL~~~~------~e~sr~tL----------------~r~GNTSSaS 439 (502)
T PLN02377 406 AVIDELEKNL------------------------QLLPVH------VEASRMTL----------------HRFGNTSSSS 439 (502)
T ss_pred HHHHHHHHHc------------------------CCCccc------chHHHHHH----------------HhcCCchhhH
Confidence 9999999988 666432 44555666 8999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEeC
Q 012353 332 LYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 332 ~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~~ 372 (465)
+|+.|..++++ +++++|++|++++||+|+++++.++++..
T Consensus 440 I~~aL~~~~~~-grik~Gd~VlliaFGsGf~~~s~v~~~~~ 479 (502)
T PLN02377 440 IWYELAYIEAK-GRMRKGNRVWQIAFGSGFKCNSAVWEALR 479 (502)
T ss_pred HHHHHHHHHHc-CCCCCCCeEEEEEEccccEeeeEEEEEec
Confidence 99999999887 88999999999999999999999999876
No 33
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.5e-35 Score=307.01 Aligned_cols=312 Identities=19% Similarity=0.254 Sum_probs=221.8
Q ss_pred CceeEEeEEEEecCCc--eechHHHHHhc---C-CChh------hh--hhhhcCeEEecCCC-------------CCCHH
Q 012353 2 AKNVGILAMDIYFPPT--CVQQEALEAHD---G-ASKG------KY--TIGLGQECMAFCSE-------------VEDVI 54 (465)
Q Consensus 2 ~~~vgI~~i~~y~P~~--~v~~~~l~~~~---g-~~~~------k~--~~Gig~r~~av~~~-------------~Ed~~ 54 (465)
|..|++...++|-|+. +++.+.+.+.. | .+++ |+ +.|+|++.+ +|+. .+.+.
T Consensus 111 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty-~P~~~~~~~~~~~~~~~r~ea~ 189 (521)
T PLN02854 111 SKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETY-LPRGITSRPPNLCMEEARAEAE 189 (521)
T ss_pred CCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccc-cCccccCCCCcchHHHHHHHHH
Confidence 6789999999999875 57887766543 3 3333 22 589998864 3321 12355
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec-CcChhHHHHHHHHHHHHHc
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFNCVNWVES 133 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~aC~gg~~AL~~A~~~l~s 133 (465)
.....|+.++|+++|++|+|||.||+ ++|+++..|+++++|+++||+ ..++.+||++ +||+||+.||.+|.+++++
T Consensus 190 ~v~~~~~~~lL~kaGi~p~dID~LIv-~cS~~~p~PSlAa~I~n~LGl--r~~i~afdLsgmGCSggl~aL~lA~~lL~~ 266 (521)
T PLN02854 190 AVMFGALDSLFSKTGVKPRDIGILIV-NCSLFNPTPSLSAMIVNHYKL--RTDIKSYNLGGMGCSAGLISIDLANDLLKA 266 (521)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCCHHHHHHHHhCC--CCCceEEecccchhhhHHHHHHHHHHHHHh
Confidence 66677899999999999999999998 578888899999999999998 5689999998 8999999999999999999
Q ss_pred CCCCCCEEEEEEecccccc-----CCCC---CcccccceeeeeecCCCCc-c---ccc-ccccccc---cCccc-ccccC
Q 012353 134 SSWDGRYGLVVCTDSAVYA-----EGPA---RPTGGAAAVVMLVGPDAPV-A---FES-KLRGSHM---SHAYD-FYKPN 196 (465)
Q Consensus 134 g~~~~~~aLVVasD~~~y~-----~~~~---~~t~GdGA~A~Ll~~~~~~-~---~~~-~~~~~~~---~~~~d-f~~p~ 196 (465)
+ ++++||||++|..+.. +... ..+|||||+|+||++.+.. . +.. +...++. .+.++ .+.|.
T Consensus 267 ~--~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~~~~~~i~~~~ 344 (521)
T PLN02854 267 N--PNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDKNYNCVYQRE 344 (521)
T ss_pred C--CCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCCCccCeEEecc
Confidence 9 5599999999997521 1112 3679999999999975411 0 000 0112221 11122 22221
Q ss_pred --CCC-------CCcc-----------cCCchhHHHHH--HHHHHHHHHHHHHhhhhhcCCCCC------CCCceeeccC
Q 012353 197 --LAS-------EYPV-----------VDGKLSQTCYL--MALDTCYKCLCSKYEKLEGKQFSL------SNADYFVFHS 248 (465)
Q Consensus 197 --~~~-------~~p~-----------~dg~~s~~~y~--~~~~~~~~~~~~~~~~~~~~~~~~------~did~~~~H~ 248 (465)
.+. +.|. +.|+..+.... ..+....++.+.+ .++++ +||||||+||
T Consensus 345 d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~------~gl~~~~pd~~~didhf~iHq 418 (521)
T PLN02854 345 DDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLK------AKVKPYIPDFKLAFEHFCIHA 418 (521)
T ss_pred CCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHH------cCCCccCCcccccCcEEEECC
Confidence 110 1111 12222211110 0011222222222 35554 6899999999
Q ss_pred CchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccc
Q 012353 249 PYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMY 328 (465)
Q Consensus 249 p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~ 328 (465)
++.++++.+.++| ++++++ +|+...++ +++|||+
T Consensus 419 ggr~IId~v~k~L------------------------gL~~~~------~e~sr~tL----------------~rfGNTS 452 (521)
T PLN02854 419 GGRAVLDELQKNL------------------------QLSDWH------MEPSRMTL----------------HRFGNTS 452 (521)
T ss_pred CCHHHHHHHHHHc------------------------CCCccc------ccchHHHh----------------hhcCChH
Confidence 9999999999998 666432 33444556 8999999
Q ss_pred hhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEeC
Q 012353 329 TASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 329 taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~~ 372 (465)
|+|+|+.|+.+.++ +++++||+|++++||+|++|++.+++|-.
T Consensus 453 SASI~~~L~~~~~k-Grik~GD~Vl~iaFGsGft~~sav~~~~~ 495 (521)
T PLN02854 453 SSSLWYELAYTEAK-GRVSAGDRVWQIAFGSGFKCNSAVWKALR 495 (521)
T ss_pred hhHHHHHHHHHHHc-CCCCCCCEEEEEEEchhhhhhheeeEEec
Confidence 99999999999987 88999999999999999999999999976
No 34
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=5.1e-35 Score=303.09 Aligned_cols=311 Identities=21% Similarity=0.275 Sum_probs=221.6
Q ss_pred CCceeEEeEEEEecCCc--eechHHHHHhc------C-CChh---------hh--hhhhcCeEEecCCCC----------
Q 012353 1 MAKNVGILAMDIYFPPT--CVQQEALEAHD------G-ASKG---------KY--TIGLGQECMAFCSEV---------- 50 (465)
Q Consensus 1 ~~~~vgI~~i~~y~P~~--~v~~~~l~~~~------g-~~~~---------k~--~~Gig~r~~av~~~~---------- 50 (465)
.|..|++...++|-|+. +++.+.+.+.. | .+.+ |+ ++|||+|++. +..-
T Consensus 64 ~~~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~-p~~~~~~~~~~~~~ 142 (478)
T PLN02932 64 RPKPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYI-PEGLQCLPLQQNLA 142 (478)
T ss_pred CCCcEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceee-ccccccCCHHHHHH
Confidence 36789999999999875 57777766543 2 2221 22 4799999864 3221
Q ss_pred ---CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec-CcChhHHHHHHH
Q 012353 51 ---EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFN 126 (465)
Q Consensus 51 ---Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~aC~gg~~AL~~ 126 (465)
|.+.+|+..|+++||+++|++|+|||.||++|+|+. ..|++++.|+++||+ .+++.+||++ +||+||+.||.+
T Consensus 143 ~~~~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~-~~Pslaa~V~~~lGl--r~~i~~fdL~gmGCSggl~aL~l 219 (478)
T PLN02932 143 VSRKETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFN-PTPSLSSILVNKFKL--RDNIKSLNLGGMGCSAGVIAIDA 219 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-CCCcHHHHHHHHhCC--CCCceEEEeccchhhhHHHHHHH
Confidence 248899999999999999999999999999999986 899999999999998 6689999998 899999999999
Q ss_pred HHHHHHcCCCCCCEEEEEEeccccc----cCC----CCCcccccceeeeeecCCCCc------cccccccccccc---Cc
Q 012353 127 CVNWVESSSWDGRYGLVVCTDSAVY----AEG----PARPTGGAAAVVMLVGPDAPV------AFESKLRGSHMS---HA 189 (465)
Q Consensus 127 A~~~l~sg~~~~~~aLVVasD~~~y----~~~----~~~~t~GdGA~A~Ll~~~~~~------~~~~~~~~~~~~---~~ 189 (465)
|.++++++ ++++||||++|..+. .+. -...+|||||+|+||+..+.. .+. ....++.. +.
T Consensus 220 A~~ll~~~--~~~~aLVVstE~~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~-~~v~t~~~ad~~~ 296 (478)
T PLN02932 220 AKSLLQVH--RNTYALVVSTENITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELV-HTVRVHTGADDRS 296 (478)
T ss_pred HHHHHHcC--CCCeEEEEEEeecccccCCCcchhhhccceeecccceEEEEecccccccCcceEEE-eeeeeeeccCCCc
Confidence 99999999 559999999999732 121 124679999999999976421 111 01122211 11
Q ss_pred cc-ccccC---CC-----C-CCccc-----------CCchh------HHHHHHHHHHHHHHHHHHhhhhhcCCCCC---C
Q 012353 190 YD-FYKPN---LA-----S-EYPVV-----------DGKLS------QTCYLMALDTCYKCLCSKYEKLEGKQFSL---S 239 (465)
Q Consensus 190 ~d-f~~p~---~~-----~-~~p~~-----------dg~~s------~~~y~~~~~~~~~~~~~~~~~~~~~~~~~---~ 239 (465)
++ .+.+. +. + +.|.+ .|... +..++..+. +.+.+.. ..+..+ +
T Consensus 297 ~~~v~~~~d~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~---~~~~k~~----~~~~~~~~~~ 369 (478)
T PLN02932 297 YECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVK---KKFFNPK----LKHYIPDFKL 369 (478)
T ss_pred cccceeecccCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhH---HHHHHHH----hhcCcHhHHh
Confidence 11 12221 00 0 11111 11110 011111111 1111110 012222 5
Q ss_pred CCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcc
Q 012353 240 NADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTL 319 (465)
Q Consensus 240 did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~ 319 (465)
+||+||+||++.++++.+.++| |++.+ ++|+...++
T Consensus 370 ~id~f~iHqggr~IIdav~k~L------------------------gL~~~------~~e~s~~tL-------------- 405 (478)
T PLN02932 370 AFEHFCIHAGGRALIDEMEKNL------------------------HLTPL------DVEASRMTL-------------- 405 (478)
T ss_pred hhceEEEccCCHHHHHHHHHHc------------------------CCChH------HHHHHHHHH--------------
Confidence 8999999999999999999988 66653 355666667
Q ss_pred cccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEeC
Q 012353 320 IPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 320 ~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~~ 372 (465)
+++|||+|+|+|+.|+.+..+ +++++||+|++++||+|+++++.+++.-.
T Consensus 406 --~rfGNTSSaSI~~~L~~~ea~-grik~Gd~vl~iaFGsGf~~~s~vw~~~~ 455 (478)
T PLN02932 406 --HRFGNTSSSSIWYELAYTEAK-GRMKKGDRIWQIALGSGFKCNSSVWVALR 455 (478)
T ss_pred --HHhCChhhhHHHHHHHHHHHc-CCCCCCCEEEEEEEeccHHHHHHHHHHhc
Confidence 999999999999999999877 88899999999999999999998887544
No 35
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=4.2e-34 Score=297.19 Aligned_cols=312 Identities=17% Similarity=0.219 Sum_probs=218.0
Q ss_pred CceeEEeEEEEecCCc--eechHHHHHhc---C-CChh------hh--hhhhcCeEEecCC------C-------CCCHH
Q 012353 2 AKNVGILAMDIYFPPT--CVQQEALEAHD---G-ASKG------KY--TIGLGQECMAFCS------E-------VEDVI 54 (465)
Q Consensus 2 ~~~vgI~~i~~y~P~~--~v~~~~l~~~~---g-~~~~------k~--~~Gig~r~~av~~------~-------~Ed~~ 54 (465)
|..|++...++|-|+. .++.+.+.+.. | .+++ |+ ++|+|++.+ +|+ + .+.+.
T Consensus 99 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~-~p~~~~~~~~~~~~~~~~~Ea~ 177 (511)
T PLN02192 99 PRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTY-LPEAVLNVPPNPCMAEARKEAE 177 (511)
T ss_pred CCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccc-CChhhccCCCCccHHHHHHHHH
Confidence 6789999999999876 57777776553 3 3333 22 589998764 332 1 23467
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec-CcChhHHHHHHHHHHHHHc
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFNCVNWVES 133 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~aC~gg~~AL~~A~~~l~s 133 (465)
.+...|+++||+++|++|+|||.||++ +|+....|++++.|+++||+ ..++.+||++ +||+||+.||.+|.+++++
T Consensus 178 ~~~~~Aa~~aL~kaGi~p~DIDiLIv~-~S~~~~~PSlaa~I~n~lGl--r~~i~afdLsgmGCSggl~aLdlA~~lL~a 254 (511)
T PLN02192 178 TVMFGAIDQLLAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL--RGNILSYNLGGMGCSAGLISIDLAKHLLQV 254 (511)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCchHHHHHHHHhCC--CCCceEEEcccchhhhHHHHHHHHHHHHHc
Confidence 889999999999999999999999987 56778899999999999998 5689999998 7999999999999999999
Q ss_pred CCCCCCEEEEEEecccccc--CCCCC------cccccceeeeeecCCCCc------cccccccccccc---Cccc-cccc
Q 012353 134 SSWDGRYGLVVCTDSAVYA--EGPAR------PTGGAAAVVMLVGPDAPV------AFESKLRGSHMS---HAYD-FYKP 195 (465)
Q Consensus 134 g~~~~~~aLVVasD~~~y~--~~~~~------~t~GdGA~A~Ll~~~~~~------~~~~~~~~~~~~---~~~d-f~~p 195 (465)
+ ++++||||++|..+.. .+.++ .+|||||+|+||++.+.. .+.. ...++.. ..++ .+.|
T Consensus 255 ~--~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~-~vrt~~~~dd~~~~~v~~~ 331 (511)
T PLN02192 255 H--PNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVH-TVRTHKGADDKCFACVTQE 331 (511)
T ss_pred C--CCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeee-eEEEEecCChhhccceecc
Confidence 9 5599999999998522 11222 579999999999984311 1110 0111111 1111 1112
Q ss_pred CCC---------CCCcccCCch-h--H--------------HHHHHH-HHHHHHHHHHHhhhhhcCCCCCCCCceeeccC
Q 012353 196 NLA---------SEYPVVDGKL-S--Q--------------TCYLMA-LDTCYKCLCSKYEKLEGKQFSLSNADYFVFHS 248 (465)
Q Consensus 196 ~~~---------~~~p~~dg~~-s--~--------------~~y~~~-~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~ 248 (465)
... .+.|.+-|.. . + ..++.. -++.++...+... .....+||+||+||
T Consensus 332 ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~-----p~~~~~Idhf~iHq 406 (511)
T PLN02192 332 EDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYI-----PDFKLAFEHFCIHA 406 (511)
T ss_pred cccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhcc-----HHHHHhhceEeecc
Confidence 100 0001011100 0 0 000000 0011110011000 00114799999999
Q ss_pred CchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccc
Q 012353 249 PYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMY 328 (465)
Q Consensus 249 p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~ 328 (465)
++.++++.+.++| +++.+ ++|+...++ +++|||+
T Consensus 407 ggr~IId~v~k~L------------------------gL~~~------~~e~sr~tL----------------~rfGNTS 440 (511)
T PLN02192 407 GGRAVLDELEKNL------------------------QLSDW------HMEPSRMTL----------------YRFGNTS 440 (511)
T ss_pred CCHHHHHHHHHHc------------------------CCCch------hhhHHHHHH----------------hHcCChH
Confidence 9999999999988 66542 245556666 9999999
Q ss_pred hhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEeC
Q 012353 329 TASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 329 taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~~ 372 (465)
|+|+|+.|+.+.++ +++++||+|++++||+|+++++.+++|..
T Consensus 441 SaSI~~aL~~~eak-grik~GDrVl~iaFGsGf~~~sav~~~~~ 483 (511)
T PLN02192 441 SSSLWYELAYSEAK-GRIKKGDRTWQIAFGSGFKCNSAVWKALR 483 (511)
T ss_pred HhHHHHHHHHHHHc-CCCCCCCEEEEEEEcchHhhhhhheeeec
Confidence 99999999999887 88999999999999999999999999976
No 36
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=7e-32 Score=276.52 Aligned_cols=318 Identities=17% Similarity=0.235 Sum_probs=214.7
Q ss_pred CCceeEEeEEEEecCCc--eechHHHHHhc---C-CChh------hh--hhhhcCeEEecCC------------CCCCHH
Q 012353 1 MAKNVGILAMDIYFPPT--CVQQEALEAHD---G-ASKG------KY--TIGLGQECMAFCS------------EVEDVI 54 (465)
Q Consensus 1 ~~~~vgI~~i~~y~P~~--~v~~~~l~~~~---g-~~~~------k~--~~Gig~r~~av~~------------~~Ed~~ 54 (465)
.|..|++...++|-|+. +++.+.+.+.. | .+++ |+ ++|||++.+ ++. +.....
T Consensus 56 ~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et~-~p~~~~~~~~~~~~~~~~~e~ 134 (466)
T PLN00415 56 RSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTY-SPRCMLTSPPTPSMYEARHES 134 (466)
T ss_pred CCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCee-eCCccccCCCCCChhhhHHHH
Confidence 36789999999999865 57777765543 2 3333 22 368887643 111 233456
Q ss_pred HHHHH-HHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecC-cChhHHHHHHHHHHHHH
Q 012353 55 SMSLT-AVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTN-ACYGGTAALFNCVNWVE 132 (465)
Q Consensus 55 ~la~~-Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~-aC~gg~~AL~~A~~~l~ 132 (465)
+|++. |++++|+++|++|+|||.||+ ++|+....|+.++.|+++||+ .+++.++|+++ ||+||+.||.+|.++++
T Consensus 135 em~i~~A~~~aL~~aGi~p~dID~LIv-s~T~~~~~Pslaa~l~~~LGL--r~~v~~~dL~gmGCsggv~aL~lA~~ll~ 211 (466)
T PLN00415 135 ELVIFGALNSLFKKTGIEPREVGIFIV-NCSLFNPNPSLSSMIVNRYKL--KTDVKTYNLSGMGCSAGAISVDLATNLLK 211 (466)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-ECcCCCCCchHHHHHHHHhCC--CCCceEEEeccccchHHHHHHHHHHHHHH
Confidence 77777 677889999999999999985 678877799999999999998 67999999995 99999999999999999
Q ss_pred cCCCCCCEEEEEEeccccc--cCCCC------CcccccceeeeeecCCCCc----cccc-ccccccccCcccc-----cc
Q 012353 133 SSSWDGRYGLVVCTDSAVY--AEGPA------RPTGGAAAVVMLVGPDAPV----AFES-KLRGSHMSHAYDF-----YK 194 (465)
Q Consensus 133 sg~~~~~~aLVVasD~~~y--~~~~~------~~t~GdGA~A~Ll~~~~~~----~~~~-~~~~~~~~~~~df-----~~ 194 (465)
++ ++++||||++|.++. -++++ ..+|||||+|+||+.++.. .++. ....+++.+..+- |.
T Consensus 212 a~--~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~vrt~~~~~d~~~~~~~~~ 289 (466)
T PLN00415 212 AN--PNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKGSSDKHYTCAEQK 289 (466)
T ss_pred hC--CCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEEEecCCCChhhhcceeee
Confidence 99 669999999999742 12222 3679999999999986421 1111 1222332211111 11
Q ss_pred cCCCCCCc-ccCCchhHHHHHHHHHHHHHHHHHHhh--------------h-hhcCCCCC--CC----CceeeccCCchH
Q 012353 195 PNLASEYP-VVDGKLSQTCYLMALDTCYKCLCSKYE--------------K-LEGKQFSL--SN----ADYFVFHSPYNK 252 (465)
Q Consensus 195 p~~~~~~p-~~dg~~s~~~y~~~~~~~~~~~~~~~~--------------~-~~~~~~~~--~d----id~~~~H~p~~k 252 (465)
-+ ...+. ..=.+.....--+++...+..+..... + ........ .| +++||+|+++.+
T Consensus 290 ~d-~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd~~~~~~hf~iHpGGra 368 (466)
T PLN00415 290 ED-SKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFKLCFKHFCIHAGGRA 368 (466)
T ss_pred ec-CCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCCccccceeEEecCCcHH
Confidence 11 00000 000011111111222222222211100 0 00001111 23 789999999999
Q ss_pred HHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhH
Q 012353 253 LVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASL 332 (465)
Q Consensus 253 m~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~ 332 (465)
+++.+.+.| +++++ +++||..+.+++|||+|+|+
T Consensus 369 VLdave~~L------------------------gL~~~----------------------~le~Sr~vL~r~GN~SSsSV 402 (466)
T PLN00415 369 LLDAVEKGL------------------------GLSEF----------------------DLEPSRMTLHRFGNTSSSSL 402 (466)
T ss_pred HHHHHHHHc------------------------CCCHH----------------------HHHHHHHHHHHhCCchhhhH
Confidence 999999888 55543 23445555599999999999
Q ss_pred HHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEeC
Q 012353 333 YAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 333 ~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~~ 372 (465)
+..|..+..+ ++.++|+++++++||+|++++.+++++-.
T Consensus 403 ~yvL~~~~~~-~~~~~Gdrvl~iaFGpGf~~es~v~~~~~ 441 (466)
T PLN00415 403 WYELAYVEAK-CRVKRGDRVWQLAFGSGFKCNSIVWRALR 441 (466)
T ss_pred HHHHHHHHhh-ccCCCCCEEEEEEEcCcchhhHhHHHHhc
Confidence 9999999876 67889999999999999999999998865
No 37
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.4e-31 Score=252.48 Aligned_cols=306 Identities=17% Similarity=0.246 Sum_probs=223.5
Q ss_pred EEeEEEEecCCceechHHHHHhc----CCC-hhh----hh--hhhcCeEEecCCC---------------CCCHHHHHHH
Q 012353 6 GILAMDIYFPPTCVQQEALEAHD----GAS-KGK----YT--IGLGQECMAFCSE---------------VEDVISMSLT 59 (465)
Q Consensus 6 gI~~i~~y~P~~~v~~~~l~~~~----g~~-~~k----~~--~Gig~r~~av~~~---------------~Ed~~~la~~ 59 (465)
-|.+++.++|++.+.|.|+...+ ..+ -+. +. .+|..|+...|.+ -|.++.++++
T Consensus 3 ~i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~~l~v~ 82 (356)
T COG3424 3 VIASVATALPPYRYNQSEITDSFAELPFQEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAVPLGVD 82 (356)
T ss_pred eeeecccCCCccccchHHHHHHHHHhccccchHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHHHHHHH
Confidence 58899999999999998775543 111 111 22 3455555443322 1458999999
Q ss_pred HHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec-CcChhHHHHHHHHHHHHHcCCCCC
Q 012353 60 AVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFNCVNWVESSSWDG 138 (465)
Q Consensus 60 Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~aC~gg~~AL~~A~~~l~sg~~~~ 138 (465)
|+++||+..++.|+|||+|+++|+|+.. .|++..+|+.+||+ ++++.-+-+. .||++|.+||..|.+|++++ |.
T Consensus 83 a~r~aL~~~~l~pedId~vv~vtsTG~~-~Ps~dari~~~Lgl--~p~~~Rvpv~glGCaaga~glara~~y~ra~--P~ 157 (356)
T COG3424 83 ALRRALDGSPLRPEDIDAVVTVTSTGLA-TPSLDARIVGELGL--SPDTRRVPVWGLGCAAGAAGLARARDYCRAA--PD 157 (356)
T ss_pred HHHHHhccCCCCHHHCcEEEEEeecccc-CCChhHHHHhhcCC--CCccceeeeecchhhhhhhHHHHHHHHHhhC--cc
Confidence 9999999999999999999999999975 89999999999999 7888888885 79999999999999999999 66
Q ss_pred CEEEEEEeccccc----cCCC--C---CcccccceeeeeecCCCCc----cccccccccccc---Ccccc--cccCCCCC
Q 012353 139 RYGLVVCTDSAVY----AEGP--A---RPTGGAAAVVMLVGPDAPV----AFESKLRGSHMS---HAYDF--YKPNLASE 200 (465)
Q Consensus 139 ~~aLVVasD~~~y----~~~~--~---~~t~GdGA~A~Ll~~~~~~----~~~~~~~~~~~~---~~~df--~~p~~~~~ 200 (465)
.+|||||.|.|+. .+.+ + ..+||||++|+|++.+.+. ...+.+.++.+. +..|. |--. ...
T Consensus 158 ~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~-d~G 236 (356)
T COG3424 158 ANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIMGWDVG-DQG 236 (356)
T ss_pred ceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccccCCccccccceeec-CCc
Confidence 9999999999943 2221 1 3579999999999987541 111223444432 11111 1000 111
Q ss_pred CcccCCchhHHHHH-HHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhh
Q 012353 201 YPVVDGKLSQTCYL-MALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKE 279 (465)
Q Consensus 201 ~p~~dg~~s~~~y~-~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~ 279 (465)
+-.+-.+. +-.++ .-+...+..++... +++.+||+.|+.|.+++|++++..+.|
T Consensus 237 ~~~vlSrd-lp~lIe~~l~~~V~~fL~~~------~ls~~dI~~w~~HPGG~KVida~~~sL------------------ 291 (356)
T COG3424 237 LKVVLSRD-LPNLIESYLAPNVTTFLATH------GLSIEDIEAWVVHPGGPKVIDAYEESL------------------ 291 (356)
T ss_pred EEEEEcCc-hhHHHHHHhhhhHHHHHHHc------CCchhhhceeeeCCCCchHHHHHHHhc------------------
Confidence 11110000 01122 22344455555554 799999999999999999999999988
Q ss_pred ccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEecc
Q 012353 280 KLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGS 359 (465)
Q Consensus 280 ~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGs 359 (465)
|++++. + +.|+...+++|||.|||++..|...+++ . .++|.+.+++++|+
T Consensus 292 ------gls~e~------l----------------~~s~~~L~~~GNMSSatvLfVL~d~l~~-~-~~~g~~Gl~~A~GP 341 (356)
T COG3424 292 ------GLSPEA------L----------------ELSWDVLREYGNMSSATVLFVLEDTLQK-A-PKSGSRGLMFAMGP 341 (356)
T ss_pred ------CCCHHH------H----------------HHHHHHHHHhCCccchhhHHHHHHHHHh-c-CCCCcceeeeecCC
Confidence 666543 2 2233344999999999999999999998 2 57999999999999
Q ss_pred chheeeeEEEEeC
Q 012353 360 GLTATMFSLKLSE 372 (465)
Q Consensus 360 G~~~~~~~~~~~~ 372 (465)
|++.+..+++|..
T Consensus 342 Gf~sElvL~~w~~ 354 (356)
T COG3424 342 GFCSELVLLDWEG 354 (356)
T ss_pred cceeeeeeEEeec
Confidence 9999999999975
No 38
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.95 E-value=3.7e-27 Score=228.43 Aligned_cols=236 Identities=15% Similarity=0.086 Sum_probs=180.3
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHH
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVE 132 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~ 132 (465)
..+|+.+|++++|+++|+++++||.|+++|+++....|+.+.+|+..||+ . +..++++.++|++++.||..|..+|+
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~--~-~~~~~~i~~~C~s~~~al~~A~~~i~ 83 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGI--S-GGPAYSVNQACATGLTALALAVQQVQ 83 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCC--C-CCCcceeccHhHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999988789999999999997 3 78899999999999999999999999
Q ss_pred cCCCCCCEEEEEEeccccccCCCCCcccccceeeeeecCCCCc-cc--c--cccccccccCcccccccCCCCCCcccCCc
Q 012353 133 SSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPV-AF--E--SKLRGSHMSHAYDFYKPNLASEYPVVDGK 207 (465)
Q Consensus 133 sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGA~A~Ll~~~~~~-~~--~--~~~~~~~~~~~~df~~p~~~~~~p~~dg~ 207 (465)
+|.. ++|||+++|. .++||||+|+||++++.. .. . ....+...... +. ...
T Consensus 84 ~g~~--~~~lv~~~e~---------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~-----~~--~~~------ 139 (254)
T cd00327 84 NGKA--DIVLAGGSEE---------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFD-----GA--SMV------ 139 (254)
T ss_pred CCCC--CEEEEEecce---------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCC-----CC--CCC------
Confidence 9966 9999999998 689999999999986421 00 0 00111111100 00 000
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCC
Q 012353 208 LSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTL 287 (465)
Q Consensus 208 ~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i 287 (465)
...+.+.+.++++.++++. ++.++|+|++++|+++.++.+.+.+.+.+..
T Consensus 140 --~~~~~~~~~~~i~~~l~~a------g~~~~did~~~~h~~~~~~~~~~~~~~~~~~---------------------- 189 (254)
T cd00327 140 --PAVSGEGLARAARKALEGA------GLTPSDIDYVEAHGTGTPIGDAVELALGLDP---------------------- 189 (254)
T ss_pred --CCCChHHHHHHHHHHHHHc------CCCHHHCCEEEccCCcCccccHHHHHHHHHH----------------------
Confidence 0112345566666666665 7889999999999999999999887773211
Q ss_pred CCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCC-------CCCEEEEEEeccc
Q 012353 288 SGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSEL-------DGKRVVLFSYGSG 360 (465)
Q Consensus 288 ~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~-------~G~rill~syGsG 360 (465)
++.. . -+......++||+++||.++.|..++.. .+.. +|++++++++|.|
T Consensus 190 --~~~~-------------------~-~~~~~~~~~~G~~~~as~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~g~G 246 (254)
T cd00327 190 --DGVR-------------------S-PAVSATLIMTGHPLGAAGLAILDELLLM-LEHEFIPPTPREPRTVLLLGFGLG 246 (254)
T ss_pred --hCCC-------------------C-CceeccccccccchHHHHHHHHHHHHHH-HhCCCcCCCCCCcCEEEEeeEcCC
Confidence 1000 0 0111223799999999999999999876 3333 7999999999999
Q ss_pred hheeeeEE
Q 012353 361 LTATMFSL 368 (465)
Q Consensus 361 ~~~~~~~~ 368 (465)
.+++++++
T Consensus 247 g~~~~~~l 254 (254)
T cd00327 247 GTNAAVVL 254 (254)
T ss_pred CcceEEEC
Confidence 99988753
No 39
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.91 E-value=1e-23 Score=212.37 Aligned_cols=245 Identities=14% Similarity=0.087 Sum_probs=176.2
Q ss_pred HHHHHHHHHHHHHHHCCCC----cCCccEEEEEeecCCCC---------------------cccHHHHHHHHhcccCCCC
Q 012353 53 VISMSLTAVTNLLEKYKID----PKQIGRLEVGSETVIDK---------------------SKSIKTFLMQIFEKFGNTD 107 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~----~~~Id~li~~T~s~~~~---------------------~ps~a~~l~~~LGl~g~~~ 107 (465)
..+|++.|++++|+++|++ +++||.|+++|+++.+. .|+.+..|+..||+ +
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl----~ 86 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGI----H 86 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCC----C
Confidence 7899999999999999999 99999999999887764 67889999999997 4
Q ss_pred ceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc--cC--------------------CCCCccccccee
Q 012353 108 IEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY--AE--------------------GPARPTGGAAAV 165 (465)
Q Consensus 108 ~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y--~~--------------------~~~~~t~GdGA~ 165 (465)
.+++++.++|++++.||..|..+|++|.. +++||+++|.... .. .....++||||+
T Consensus 87 g~~~~v~~~cas~~~al~~A~~~i~~g~~--~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaa 164 (332)
T cd00825 87 GPAYDVSAACAGSLHALSLAADAVQNGKQ--DIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAG 164 (332)
T ss_pred CCccccccHhHHHHHHHHHHHHHHHcCCC--CEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEE
Confidence 56788899999999999999999999976 9999999998621 00 012356899999
Q ss_pred eeeecCCCCcc-----cccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 012353 166 VMLVGPDAPVA-----FESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240 (465)
Q Consensus 166 A~Ll~~~~~~~-----~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~d 240 (465)
|+||++.+... +...+.+..+. ..+..... + ....+.+.++++.++++. +++++|
T Consensus 165 A~vL~~~~~a~~~~~~~~~~i~~~~~~-----~~~~~~~~-~--------~~~~~~~~~~i~~al~~a------gl~~~d 224 (332)
T cd00825 165 ALVVEELEHALARGAHIYAEIVGTAAT-----IDGAGMGA-F--------APSAEGLARAAKEALAVA------GLTVWD 224 (332)
T ss_pred EEEECcHHHHHHCCCeEEEEEEEEEEc-----cCCCCCCC-C--------CcCHHHHHHHHHHHHHHc------CCCHhH
Confidence 99999864310 00001111110 11110000 0 011234555666666665 799999
Q ss_pred CceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccc
Q 012353 241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLI 320 (465)
Q Consensus 241 id~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~ 320 (465)
||++++|+++.++.+.+.+++....+ +.. -.+...+
T Consensus 225 id~~~~h~~~~~~~~~~e~~~~~~~~-------------------~~~-------------------------~~~~~~~ 260 (332)
T cd00825 225 IDYLVAHGTGTPIGDVKELKLLRSEF-------------------GDK-------------------------SPAVSAT 260 (332)
T ss_pred CCEEEccCCCCCCCCHHHHHHHHHHh-------------------CCC-------------------------CceeECC
Confidence 99999999999988888776642211 000 0011122
Q ss_pred ccccCccchhhHHHHHHHHHHhcCCCC-------------------------CCCEEEEEEeccchheeeeEE
Q 012353 321 PKQVGNMYTASLYAALASLIHNKHSEL-------------------------DGKRVVLFSYGSGLTATMFSL 368 (465)
Q Consensus 321 ~~~~GN~~taS~~l~L~~ll~~~~~~~-------------------------~G~rill~syGsG~~~~~~~~ 368 (465)
..++||+++||.++.|...+.. .+.. +|++++++++|.|.+++++++
T Consensus 261 ~~~~G~~~aas~~~~l~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 261 KAMTGNLSSAAVVLAVDEAVLM-LEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred CcccccchhHhHHHHHHHHHHH-HhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 3799999999999999998765 2322 689999999999999988753
No 40
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.89 E-value=5.6e-23 Score=193.33 Aligned_cols=167 Identities=22% Similarity=0.305 Sum_probs=130.3
Q ss_pred CceeEEeEEEEecCCceechHHHHHhc----CCCh-----hhh-----hhhhcCeEEecCCC------------------
Q 012353 2 AKNVGILAMDIYFPPTCVQQEALEAHD----GASK-----GKY-----TIGLGQECMAFCSE------------------ 49 (465)
Q Consensus 2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~----g~~~-----~k~-----~~Gig~r~~av~~~------------------ 49 (465)
+....|.+||+.+|+++++|+++.+.. +.+. +++ ..||..|++.++.+
T Consensus 12 ~g~A~Il~IgTA~P~~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ps~~~ 91 (226)
T PF00195_consen 12 PGPAYILSIGTAVPPHRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFADPSLAE 91 (226)
T ss_dssp SSSEEEEEEEEE-SSEEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSSS-HHH
T ss_pred CCCeEEEEEEEeCCCceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccCccHHH
Confidence 356899999999999999999987752 3222 233 47999999876421
Q ss_pred -----CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec-CcChhHHHH
Q 012353 50 -----VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAA 123 (465)
Q Consensus 50 -----~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~aC~gg~~A 123 (465)
.+....|+.+|++++|+++|++++||++||+.|+|+.. .|++..+|.++||| ++++.-+.+. .||+||+.|
T Consensus 92 R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~-~PglD~~l~~~LgL--~~~v~R~~i~~~GC~gg~~~ 168 (226)
T PF00195_consen 92 RNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIA-APGLDARLINRLGL--RPDVQRTPIFGMGCAGGAAG 168 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSE-CS-HHHHHHHHHT----TTSEEEEEES-GGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcC-CCchhHHHHhcCCC--CCCcEEEEEeccchhhHHHH
Confidence 14578999999999999999999999999999999975 99999999999999 7888888886 799999999
Q ss_pred HHHHHHHHHcCCCCCCEEEEEEecccc--cc-C-CCC------CcccccceeeeeecCCC
Q 012353 124 LFNCVNWVESSSWDGRYGLVVCTDSAV--YA-E-GPA------RPTGGAAAVVMLVGPDA 173 (465)
Q Consensus 124 L~~A~~~l~sg~~~~~~aLVVasD~~~--y~-~-~~~------~~t~GdGA~A~Ll~~~~ 173 (465)
|..|.++.+++ |+.+||||+.|.++ |. + ... ..+|||||+|+||+.+|
T Consensus 169 L~~A~~~~~~~--p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 169 LRRAKDIARAN--PGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHS--TT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHhCC--ccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 99999999999 78999999999995 32 1 111 25699999999999875
No 41
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.76 E-value=6.7e-17 Score=164.23 Aligned_cols=303 Identities=14% Similarity=0.037 Sum_probs=192.3
Q ss_pred CCceeEEeEEEEecCCce------------echHHHHHhcCCC-hhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHH
Q 012353 1 MAKNVGILAMDIYFPPTC------------VQQEALEAHDGAS-KGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLL 65 (465)
Q Consensus 1 ~~~~vgI~~i~~y~P~~~------------v~~~~l~~~~g~~-~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL 65 (465)
|..+|.|.+++...|--. +++.+.....+.+ .+++ .+|+..+++ ...+....|+..|++++|
T Consensus 1 ~~~~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~r~~~La~~Al~~aL 77 (348)
T PRK06147 1 MMRALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETRFIDPPGGEWLIGAPVPLPPPW---RGPERLAEMAAPAIAEAL 77 (348)
T ss_pred CCCceEEEecceeecCcCCHHHHHHHHHcccccccccccccCCCCCceEeecCcCCccc---CchHHHHHHHHHHHHHHH
Confidence 567899999999988765 2222223333332 3444 245555553 346788999999999999
Q ss_pred HHCC-CCcCCccEEEEEee-----cCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCC
Q 012353 66 EKYK-IDPKQIGRLEVGSE-----TVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGR 139 (465)
Q Consensus 66 ~~ag-i~~~~Id~li~~T~-----s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~ 139 (465)
++++ +++++|+++++.++ ++.+..++.+..+++.||+ .....++++..+|.+++.||..|..+|++|.+ +
T Consensus 78 ~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~--~~~~~~~~i~~~casg~~Al~~A~~~i~~G~~--~ 153 (348)
T PRK06147 78 EGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGL--RLEPGSAVIARGRVSGAVALAQARRLIAAGGC--P 153 (348)
T ss_pred HhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCC--CCCCCcccccccchHHHHHHHHHHHHHHcCCC--C
Confidence 9999 79999999998655 3445556778899999997 34456799999999999999999999999977 9
Q ss_pred EEEEEEeccccc-------c--------CCCCCcccccceeeeeecCCCCc-cccccccc-ccccCccccc-ccCCCCCC
Q 012353 140 YGLVVCTDSAVY-------A--------EGPARPTGGAAAVVMLVGPDAPV-AFESKLRG-SHMSHAYDFY-KPNLASEY 201 (465)
Q Consensus 140 ~aLVVasD~~~y-------~--------~~~~~~t~GdGA~A~Ll~~~~~~-~~~~~~~~-~~~~~~~df~-~p~~~~~~ 201 (465)
.+||+++|...- . +.....++|+||+++||++.+.. .-...+.+ .+..+ .+.+ ... . -
T Consensus 154 ~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~~G~v~GEGA~a~vLe~~~~A~~rga~i~a~g~~~~-~~~~~~~~-~--~ 229 (348)
T PRK06147 154 RVLVAGVDSLLTGPTLAHYEARDRLLTSQNSNGFIPGEAAAAVLLGRPAGGEAPGLPLLGLGLGRE-PAPVGESE-D--L 229 (348)
T ss_pred EEEEEeeccccCHHHHHHHHHhhccCCCCCCCceeeeceEEEEEEccHhhhhcCCCceEEEEEeec-CCCcccCC-C--C
Confidence 999999997521 0 11223579999999999985421 00001111 11111 1111 110 0 0
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhcc
Q 012353 202 PVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKL 281 (465)
Q Consensus 202 p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 281 (465)
| .+| +.+.++++..+++. ++.++|||+++.|..+.+...+.....+ ... |...
T Consensus 230 p-~~g--------~gl~~ai~~AL~~a------gl~~~dId~v~ah~~gt~~~d~~e~~A~-~~~-----------f~~~ 282 (348)
T PRK06147 230 P-LRG--------DGLTQAIRAALAEA------GCGLEDMDYRIADLNGEQYRFKEAALAE-MRL-----------FRVR 282 (348)
T ss_pred C-CCh--------HHHHHHHHHHHHHc------CCCHHHCCEEEcCCCCCccchHHHHHHH-HHH-----------hhhc
Confidence 1 122 23445555555554 7899999999999987665443322110 000 0000
Q ss_pred CCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHh-cCCCCCCCEEEEEEeccc
Q 012353 282 GPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHN-KHSELDGKRVVLFSYGSG 360 (465)
Q Consensus 282 ~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~-~~~~~~G~rill~syGsG 360 (465)
. ...+. ......+||+++|+-.+.++..+.. .....+|.+++++|-.-.
T Consensus 283 ~--~~~~~----------------------------~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~~d~ 332 (348)
T PRK06147 283 K--EFFDL----------------------------WHPAECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLSDDD 332 (348)
T ss_pred c--CCCce----------------------------ecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEecCCC
Confidence 0 00110 0112679999999988888764432 123568999999998765
Q ss_pred hheeeeEEEEe
Q 012353 361 LTATMFSLKLS 371 (465)
Q Consensus 361 ~~~~~~~~~~~ 371 (465)
-.-++++++-+
T Consensus 333 g~r~a~~l~~~ 343 (348)
T PRK06147 333 GARAALVLEYR 343 (348)
T ss_pred CceEEEEEecc
Confidence 55577777644
No 42
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=99.76 E-value=1.2e-17 Score=161.49 Aligned_cols=168 Identities=21% Similarity=0.311 Sum_probs=137.0
Q ss_pred CCceeEEeEEEEecCCc--eechHHHHHhcC----CChh------hh--hhhhcCeEEecCCC-------------CCCH
Q 012353 1 MAKNVGILAMDIYFPPT--CVQQEALEAHDG----ASKG------KY--TIGLGQECMAFCSE-------------VEDV 53 (465)
Q Consensus 1 ~~~~vgI~~i~~y~P~~--~v~~~~l~~~~g----~~~~------k~--~~Gig~r~~av~~~-------------~Ed~ 53 (465)
.|.+|++...+.|-|+. .++.+.+.+... .+++ |+ +.|||++.+. |+. .+.+
T Consensus 5 R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~-P~~~~~~p~~~s~~~a~~Ea 83 (290)
T PF08392_consen 5 RPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYL-PPALHEIPPDPSLAAAREEA 83 (290)
T ss_pred CCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccC-CcccccCCCcccHHHHHHHH
Confidence 36789999999999875 588888777542 2332 33 5899998753 321 1235
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec-CcChhHHHHHHHHHHHHH
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFNCVNWVE 132 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~aC~gg~~AL~~A~~~l~ 132 (465)
..++..|++++|+++|++|+|||.||+.+++. .+.||++++|.+++|+ ..++..+++. +||++|+.+|++|.++++
T Consensus 84 e~v~f~av~~LL~ktgv~p~dIdiLVvncs~f-~ptPSLsamIvnr~~m--r~di~~~nLsGMGCsAgliai~lA~~lL~ 160 (290)
T PF08392_consen 84 EMVIFGAVDDLLAKTGVKPSDIDILVVNCSLF-NPTPSLSAMIVNRYGM--RSDIKSYNLSGMGCSAGLIAIDLAKDLLQ 160 (290)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEECcCC-CcCCcHHHHHHHHhCC--CcCeeeecccCCcchhhHHHHHHHHHHHH
Confidence 67888999999999999999999999877664 7799999999999999 7899999996 899999999999999999
Q ss_pred cCCCCCCEEEEEEecccccc--CCC------CCcccccceeeeeecCCCC
Q 012353 133 SSSWDGRYGLVVCTDSAVYA--EGP------ARPTGGAAAVVMLVGPDAP 174 (465)
Q Consensus 133 sg~~~~~~aLVVasD~~~y~--~~~------~~~t~GdGA~A~Ll~~~~~ 174 (465)
.+ |+.+||||++|+.... .++ ...+|++||+|+||+..+.
T Consensus 161 ~~--p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~ 208 (290)
T PF08392_consen 161 AH--PNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPS 208 (290)
T ss_pred hC--CCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCcc
Confidence 99 7799999999998421 222 2467999999999998864
No 43
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.70 E-value=4.4e-17 Score=133.03 Aligned_cols=88 Identities=24% Similarity=0.331 Sum_probs=73.4
Q ss_pred cCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhh
Q 012353 233 GKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDA 312 (465)
Q Consensus 233 ~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~ 312 (465)
++|++++|||++++||++.++.+...+.+ +++.++.+. ++
T Consensus 3 ~~g~~~~did~~i~hq~~~~~~~~~~~~l------------------------gi~~~~~~~---------~~------- 42 (90)
T PF08541_consen 3 RAGLSPDDIDHFIPHQASKKILDSIAKRL------------------------GIPPERFPD---------NL------- 42 (90)
T ss_dssp HTT--GGGESEEEE-SSSHHHHHHHHHHH------------------------TS-GGGBE----------TH-------
T ss_pred cccCCHHHCCEEEeCCCCHHHHHHHHHHc------------------------CCcHHHHHH---------HH-------
Confidence 45899999999999999999999988887 788776652 34
Q ss_pred ccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEE
Q 012353 313 KVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL 370 (465)
Q Consensus 313 ~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~ 370 (465)
+++||++++|+|++|++++++ +++++||+|+++++|+|+++++++++|
T Consensus 43 ---------~~~Gn~~sa~~~~~L~~~~~~-g~~~~Gd~vl~~~~G~G~~~~~~~~~~ 90 (90)
T PF08541_consen 43 ---------AEYGNTGSASIPINLADALEE-GRIKPGDRVLLVGFGAGFSWGAAVLRW 90 (90)
T ss_dssp ---------HHH-B-GGGHHHHHHHHHHHT-TSSCTTEEEEEEEEETTTEEEEEEEE-
T ss_pred ---------hccCcchhhhHHHHHHHHHHc-CCCCCCCEEEEEEEEhhheeEEEEEEC
Confidence 899999999999999999999 789999999999999999999999987
No 44
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.68 E-value=4e-15 Score=145.86 Aligned_cols=113 Identities=14% Similarity=0.069 Sum_probs=95.3
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~ 129 (465)
++...+|+.+|+++||+++|++++|||.|++++. +. .+..+.++++.||+ +.+++.+||+++..||.+|..
T Consensus 47 EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl-~~--Q~~~As~vA~~LGI------P~fdV~~ACSTf~~AL~lAa~ 117 (327)
T TIGR02845 47 EKAERKLMEDAVNLALKKANLKKDDVDFFLAGDL-LN--QIITANFVARDLGI------PFLGLYGACSTSMETLALGAM 117 (327)
T ss_pred chhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCC-CC--cccHHHHHHHHhCC------CEEEEeccCHHHHHHHHHHHH
Confidence 4577899999999999999999999999999873 32 34578899999995 359999999999999999999
Q ss_pred HHHcCCCCCCEEEEEEecccc-------cc-CC-----CCCcccccceeeeeecCCC
Q 012353 130 WVESSSWDGRYGLVVCTDSAV-------YA-EG-----PARPTGGAAAVVMLVGPDA 173 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVasD~~~-------y~-~~-----~~~~t~GdGA~A~Ll~~~~ 173 (465)
+|++|.+ ++||||+|+... |. ++ +.-.+|||||+|+||++..
T Consensus 118 lI~SG~a--d~VLVV~Ssh~S~AErqfr~p~eyg~q~~~ta~~tgdGAGA~vl~~~~ 172 (327)
T TIGR02845 118 LVDGGFA--DRVLAATSSHYATAERQFRYPTEYGVQKPPTAQWTVTGAGAVLLASTG 172 (327)
T ss_pred HHhCCCC--CEEEEEEecccchhhhhcccccccccCCCCeeeEEEcccEEEEEeecC
Confidence 9999977 999999998763 32 22 1234699999999999874
No 45
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.60 E-value=8.6e-14 Score=136.84 Aligned_cols=113 Identities=14% Similarity=0.083 Sum_probs=95.4
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~ 129 (465)
++...+|+.+|++++|+++|++++|||.|++++.. ..+..+.++++.||+ +++++.++|+++..||.+|..
T Consensus 53 EkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll---~Q~~sAs~vA~~LGI------Pa~dV~gACST~~~AL~lAa~ 123 (337)
T PRK08304 53 EKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLL---NQIISANFAARELGI------PFLGLYGACSTMMESLALGSM 123 (337)
T ss_pred cccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCC---CCcchHHHHHHHhCC------cEEEEeccCHHHHHHHHHHHH
Confidence 55678999999999999999999999999999752 134678899999984 589999999999999999999
Q ss_pred HHHcCCCCCCEEEEEEeccc-------cccC--C----CCCcccccceeeeeecCCC
Q 012353 130 WVESSSWDGRYGLVVCTDSA-------VYAE--G----PARPTGGAAAVVMLVGPDA 173 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVasD~~-------~y~~--~----~~~~t~GdGA~A~Ll~~~~ 173 (465)
+|++|.+ ++||||+|+.. +|.. + +.-..+++||.|+||++..
T Consensus 124 lI~SG~a--d~VLVV~Ssh~s~aerqfr~P~eyg~qrp~taqwtvtGAGA~i~~~~~ 178 (337)
T PRK08304 124 LIDGGFA--DRVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAVLLSREG 178 (337)
T ss_pred HHhcCCC--CEEEEEEcchhhhhhhhccCchhccccCCCcceEEeeccEEEEEecCC
Confidence 9999977 99999999986 2321 1 2234579999999999875
No 46
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.54 E-value=5.7e-13 Score=138.16 Aligned_cols=180 Identities=14% Similarity=0.136 Sum_probs=118.7
Q ss_pred CHHHHHHHHHHHHHHHCCCCcCCccE----EEEEeecCCC--------------------------CcccHHHHHHHHhc
Q 012353 52 DVISMSLTAVTNLLEKYKIDPKQIGR----LEVGSETVID--------------------------KSKSIKTFLMQIFE 101 (465)
Q Consensus 52 d~~~la~~Aa~~aL~~agi~~~~Id~----li~~T~s~~~--------------------------~~ps~a~~l~~~LG 101 (465)
....|++.|++++|+++|+++++||. +++++.++.. ..+..+.+|+..||
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 35689999999999999999876664 5666655321 12457788999999
Q ss_pred ccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc--c-----------cC--------------C
Q 012353 102 KFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV--Y-----------AE--------------G 154 (465)
Q Consensus 102 l~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~--y-----------~~--------------~ 154 (465)
+ +..++.+..+|++++.||..|..+|++|.+ +.|||+++|... + .. .
T Consensus 150 l----~g~~~~v~~acas~~~Al~~A~~~i~~G~~--d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~ 223 (406)
T cd00834 150 L----RGPNYTVSTACASGAHAIGDAARLIRLGRA--DVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKD 223 (406)
T ss_pred C----CCcccccchHHHHHHHHHHHHHHHHHcCCC--CEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCC
Confidence 7 235678889999999999999999999987 999999999763 0 00 0
Q ss_pred CCCcccccceeeeeecCCCCc-----ccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhh
Q 012353 155 PARPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE 229 (465)
Q Consensus 155 ~~~~t~GdGA~A~Ll~~~~~~-----~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~ 229 (465)
....++||||+|+||++.+.. .+...+.+.... .|.+... .|..++ ..+.+++++.+++.
T Consensus 224 ~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~--~d~~~~~----~~~~~~--------~~~~~~i~~al~~a- 288 (406)
T cd00834 224 RDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGAS--SDAYHIT----APDPDG--------EGAARAMRAALADA- 288 (406)
T ss_pred CCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEec--ccCCCCC----CCCCCc--------HHHHHHHHHHHHHc-
Confidence 112468999999999875421 010012222111 1111100 011112 22333444444444
Q ss_pred hhhcCCCCCCCCceeeccCCchHHHHHH
Q 012353 230 KLEGKQFSLSNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 230 ~~~~~~~~~~did~~~~H~p~~km~~~~ 257 (465)
++.++|||++.+|..++...+..
T Consensus 289 -----gi~~~dId~v~~h~tgt~~~d~~ 311 (406)
T cd00834 289 -----GLSPEDIDYINAHGTSTPLNDAA 311 (406)
T ss_pred -----CCCHHHCCEEecccccCccccHH
Confidence 78999999999999888766554
No 47
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.44 E-value=3.3e-12 Score=133.38 Aligned_cols=176 Identities=18% Similarity=0.164 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHCCCCcCCcc----EEEEEeecCCCC-------------------cccHHHHHHHHhcccCCCCcee
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIG----RLEVGSETVIDK-------------------SKSIKTFLMQIFEKFGNTDIEG 110 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id----~li~~T~s~~~~-------------------~ps~a~~l~~~LGl~g~~~~~~ 110 (465)
..|++.|++++|+++|+++++|| .|++++.++.+. .+..+..|+..||+. .++
T Consensus 88 ~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~----g~~ 163 (424)
T smart00825 88 QRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR----GPS 163 (424)
T ss_pred HHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC----CCc
Confidence 45999999999999999999998 788888765432 345677899999972 256
Q ss_pred EeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc------------c-c-CC--------CCCcccccceeeee
Q 012353 111 VDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV------------Y-A-EG--------PARPTGGAAAVVML 168 (465)
Q Consensus 111 ~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~------------y-~-~~--------~~~~t~GdGA~A~L 168 (465)
+.+..+|++++.||..|..+|++|.+ +.|||+++|... + . .. .+..++||||+|+|
T Consensus 164 ~~v~~acasg~~Al~~A~~~I~~G~~--d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaalV 241 (424)
T smart00825 164 VTVDTACSSSLVALHLACQSLRSGEC--DMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVVV 241 (424)
T ss_pred cccccHhHHHHHHHHHHHHHHHcCCC--CeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCCCcccccceEEEEE
Confidence 88899999999999999999999987 999999999631 0 0 00 12345799999999
Q ss_pred ecCCCCc-----ccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCce
Q 012353 169 VGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADY 243 (465)
Q Consensus 169 l~~~~~~-----~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~ 243 (465)
|++.... .+...+.+..... |-... ....| ++ ..+..+++..+++. |+.++|||+
T Consensus 242 Le~~e~A~~~g~~i~a~I~g~~~~~--~~~~~--~~~~~--~~--------~~~~~a~~~al~~A------gl~~~dId~ 301 (424)
T smart00825 242 LKRLSDALRDGDPILAVIRGSAVNQ--DGRSN--GLTAP--SG--------PAQARLIRQALARA------GVDPADVDY 301 (424)
T ss_pred EccHHHHHHCCCeEEEEEEEEEEeC--CCCCC--CCCCc--CH--------HHHHHHHHHHHHHh------CCCHHHccE
Confidence 9975321 0000012221110 10000 00001 11 12223444444444 789999999
Q ss_pred eeccCCchHHHH
Q 012353 244 FVFHSPYNKLVQ 255 (465)
Q Consensus 244 ~~~H~p~~km~~ 255 (465)
+..|..+++..+
T Consensus 302 i~~h~tgt~~~d 313 (424)
T smart00825 302 VEAHGTGTPLGD 313 (424)
T ss_pred EEeeCCCCCCCC
Confidence 999987776433
No 48
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.43 E-value=8.7e-12 Score=128.16 Aligned_cols=106 Identities=15% Similarity=0.129 Sum_probs=91.1
Q ss_pred hhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcC
Q 012353 38 GLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNAC 117 (465)
Q Consensus 38 Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC 117 (465)
|+|+..+.- ..+.+..+|+++|++++|+++|+++++||.|++++..+....+..+..++..||+ +.+.++++.++|
T Consensus 2 G~g~t~~~~-~~~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl---~~~~~~~v~~~c 77 (375)
T cd00829 2 GVGMTPFGR-RSDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGL---LGKPATRVEAAG 77 (375)
T ss_pred eeeecCccc-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCC---CCcceeeEeCcc
Confidence 556555432 2377899999999999999999999999999999887655456788999999997 477899999999
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc
Q 012353 118 YGGTAALFNCVNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 118 ~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~ 149 (465)
.++..+|..|..+|++|.+ +.|||+++|..
T Consensus 78 ~sg~~al~~Aa~~I~sG~~--~~vlv~g~e~~ 107 (375)
T cd00829 78 ASGSAAVRAAAAAIASGLA--DVVLVVGAEKM 107 (375)
T ss_pred HHHHHHHHHHHHHHHhCCC--CEEEEEEEeec
Confidence 9999999999999999976 99999999964
No 49
>PRK09051 beta-ketothiolase; Provisional
Probab=99.42 E-value=1.3e-11 Score=127.54 Aligned_cols=98 Identities=12% Similarity=0.128 Sum_probs=85.2
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCc-ccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHH
Q 012353 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKS-KSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (465)
Q Consensus 49 ~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~-ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A 127 (465)
.+++..+|+.+|++++|+++|++|++||.|++++.++.... +..+..+...+|+ ..++++++++++|++|..|+..|
T Consensus 23 ~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl--~~~~p~~~V~~aCaSg~~Al~~A 100 (394)
T PRK09051 23 KDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGV--PQETPAFNVNRLCGSGLQAIVSA 100 (394)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCC--CCCCceEEecccchHHHHHHHHH
Confidence 47789999999999999999999999999999998875543 3455566677787 44688999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEEecccc
Q 012353 128 VNWVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~~ 150 (465)
..+|++|.+ +.|||+++|..+
T Consensus 101 ~~~I~sG~~--d~vLvvG~E~mS 121 (394)
T PRK09051 101 AQAILLGDA--DVAIGGGAESMS 121 (394)
T ss_pred HHHHHcCCC--CEEEEEeehhcc
Confidence 999999977 999999999763
No 50
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.40 E-value=6.1e-11 Score=122.54 Aligned_cols=105 Identities=22% Similarity=0.163 Sum_probs=88.1
Q ss_pred hhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCC--cccHHHHHHHHhcccCCCCceeEeecC
Q 012353 38 GLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK--SKSIKTFLMQIFEKFGNTDIEGVDSTN 115 (465)
Q Consensus 38 Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~--~ps~a~~l~~~LGl~g~~~~~~~di~~ 115 (465)
|.++..+. ...+++..+|+++|++++|+++|+++++||.|++++.++... .+..+..++..||+ +.+.++++.+
T Consensus 8 G~~~tp~~-~~~~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl---~~~~~~~v~~ 83 (389)
T PRK06064 8 GVGQTKFG-ELWDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGL---APIPATRVEA 83 (389)
T ss_pred Ecccccce-ecCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCC---CCCCeeEEeC
Confidence 45544332 124678999999999999999999999999999988765442 36678889999997 3577899999
Q ss_pred cChhHHHHHHHHHHHHHcCCCCCCEEEEEEecc
Q 012353 116 ACYGGTAALFNCVNWVESSSWDGRYGLVVCTDS 148 (465)
Q Consensus 116 aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~ 148 (465)
+|.+++.||..|..+|++|.+ +.|||+++|.
T Consensus 84 aCasg~~ai~~A~~~I~sG~~--~~vLv~G~e~ 114 (389)
T PRK06064 84 ACASGGAALRQAYLAVASGEA--DVVLAAGVEK 114 (389)
T ss_pred CcHHHHHHHHHHHHHHHCCCC--CEEEEEEEEe
Confidence 999999999999999999977 9999999985
No 51
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.32 E-value=1.3e-10 Score=113.99 Aligned_cols=113 Identities=17% Similarity=0.162 Sum_probs=88.4
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~ 129 (465)
++...+|+.+|++.||+++|++++|||.+++++.+. ...| ++++++.||+ + .+++.+||+++..||.+|..
T Consensus 51 EkAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~n-Q~ip--ssfvar~LGI---P---~~gV~gACSTg~eAL~lAa~ 121 (334)
T PRK12404 51 EKAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMN-QITP--TSFAARTLGI---P---YLGLFGACSTSMEGLALAAL 121 (334)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CcCc--HHHHHHHhCC---C---ccceeecCHHHHHHHHHHHH
Confidence 455678999999999999999999999999998882 3333 4599999985 3 48999999999999999999
Q ss_pred HHHcCCCCCCEEEEEEeccc-------cccC--CCCCc-c---cccceeeeeecCCC
Q 012353 130 WVESSSWDGRYGLVVCTDSA-------VYAE--GPARP-T---GGAAAVVMLVGPDA 173 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVasD~~-------~y~~--~~~~~-t---~GdGA~A~Ll~~~~ 173 (465)
+|++|.+ ++|||++|-.. +|.. +.-+| | -=-||.|+||++..
T Consensus 122 ~VaSG~A--d~VLavtsSH~~~aErqfR~P~eyG~Qrp~taqwTvTgaga~~l~~~~ 176 (334)
T PRK12404 122 IVNSGGA--KYVLTGASSHNAAVEKQFRYPTEYGGQKPPTAQWTVTGAGAAILSKTG 176 (334)
T ss_pred HHHcCCC--CEEEEEeCcccchhhhhccCcccccCcCCCcccEEEEceEEEEEecCC
Confidence 9999987 99999998764 3321 11121 1 13456688898764
No 52
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.28 E-value=2.5e-10 Score=118.61 Aligned_cols=180 Identities=14% Similarity=0.100 Sum_probs=115.7
Q ss_pred CHHHHHHHHHHHHHHHCCCCcCC-cc----EEEEEeecCC----------------------CCc--ccHHHHHHHHhcc
Q 012353 52 DVISMSLTAVTNLLEKYKIDPKQ-IG----RLEVGSETVI----------------------DKS--KSIKTFLMQIFEK 102 (465)
Q Consensus 52 d~~~la~~Aa~~aL~~agi~~~~-Id----~li~~T~s~~----------------------~~~--ps~a~~l~~~LGl 102 (465)
....|++.|++++|+++|+++++ ++ .++++|..+. ... ...+..|...||+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 45678999999999999998755 33 2455554321 111 3567788999986
Q ss_pred cCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc------c------c-C-----CC--------C
Q 012353 103 FGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV------Y------A-E-----GP--------A 156 (465)
Q Consensus 103 ~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~------y------~-~-----~~--------~ 156 (465)
...+++.+..+|++++.||..|..+|++|.+ +.+||+++|... | . . .. .
T Consensus 151 ---~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~--d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~~ 225 (407)
T cd00828 151 ---SHGPIKTPVGACATALEALDLAVEAIRSGKA--DIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETRD 225 (407)
T ss_pred ---CCCCCcCcccHHHHHHHHHHHHHHHHHcCCC--CEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCCCC
Confidence 2345688899999999999999999999987 999999999753 1 0 0 01 1
Q ss_pred CcccccceeeeeecCCCCc-----ccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhh
Q 012353 157 RPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL 231 (465)
Q Consensus 157 ~~t~GdGA~A~Ll~~~~~~-----~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~ 231 (465)
..+.|+||+++||++.+.. .+...+.|.... .|-.. .. .+. ++ +.+.++++..+++.
T Consensus 226 G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~--~d~~~---~~-~~~-~~--------~~~~~a~~~Al~~A--- 287 (407)
T cd00828 226 GFVEAEGAGVLVLERAELALARGAPIYGRVAGTAST--TDGAG---RS-VPA-GG--------KGIARAIRTALAKA--- 287 (407)
T ss_pred cEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEec--cCCCC---CC-CCC-Ch--------HHHHHHHHHHHHHc---
Confidence 2357999999999985321 010011222111 11000 00 011 12 23334445454544
Q ss_pred hcCCCCCCCCceeeccCCchHHHHHH
Q 012353 232 EGKQFSLSNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 232 ~~~~~~~~did~~~~H~p~~km~~~~ 257 (465)
++.++|||++..|..++...+.+
T Consensus 288 ---gi~~~dId~i~~hgtgt~~~D~~ 310 (407)
T cd00828 288 ---GLSLDDLDVISAHGTSTPANDVA 310 (407)
T ss_pred ---CCCHHHcCEEecccccCccccHH
Confidence 78999999999999888765554
No 53
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.27 E-value=4.6e-11 Score=124.46 Aligned_cols=178 Identities=15% Similarity=0.120 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCccE----EEEEeecCCCC-------------------cccHHHHHHHHhcccCCCCce
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQIGR----LEVGSETVIDK-------------------SKSIKTFLMQIFEKFGNTDIE 109 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~Id~----li~~T~s~~~~-------------------~ps~a~~l~~~LGl~g~~~~~ 109 (465)
...|++.|++++|+++|+++++++. |++++.++.+. .+..+..+...||+ ..+
T Consensus 87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl----~g~ 162 (421)
T cd00833 87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDL----RGP 162 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCC----CCC
Confidence 4789999999999999999888774 77777654320 13467789999997 236
Q ss_pred eEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-------c---------------cCCCCCcccccceeee
Q 012353 110 GVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------Y---------------AEGPARPTGGAAAVVM 167 (465)
Q Consensus 110 ~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y---------------~~~~~~~t~GdGA~A~ 167 (465)
++.+..+|++++.||..|..+|++|.+ +.+||+++|... + .......++||||+|+
T Consensus 163 ~~~v~~acas~~~Al~~A~~~I~~G~~--d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaal 240 (421)
T cd00833 163 SLTVDTACSSSLVALHLACQSLRSGEC--DLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGVV 240 (421)
T ss_pred ceeeccHhHHHHHHHHHHHHHHHcCCC--CeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCCCCeeeeceEEEE
Confidence 788899999999999999999999987 999999999742 0 0011235689999999
Q ss_pred eecCCCCc-----ccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 012353 168 LVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD 242 (465)
Q Consensus 168 Ll~~~~~~-----~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did 242 (465)
||++.+.. .+...+.+.... .|.+... ...| + .+.+..+++..+++. |+.++|||
T Consensus 241 vL~~~~~A~~~g~~~~a~i~g~~~~--~~~~~~~--~~~p--~--------~~~~~~a~~~al~~A------gi~~~did 300 (421)
T cd00833 241 VLKRLSDALRDGDRIYAVIRGSAVN--QDGRTKG--ITAP--S--------GEAQAALIRRAYARA------GVDPSDID 300 (421)
T ss_pred EEeeHHHHHHCCCeEEEEEEEEEEc--CCCCCCC--CcCC--C--------HHHHHHHHHHHHHHh------CCCHHHCc
Confidence 99975321 000011222111 1111100 0001 1 123334555555554 78999999
Q ss_pred eeeccCCchHHHHH
Q 012353 243 YFVFHSPYNKLVQK 256 (465)
Q Consensus 243 ~~~~H~p~~km~~~ 256 (465)
++.+|..++...+.
T Consensus 301 ~i~~hgtgt~~~D~ 314 (421)
T cd00833 301 YVEAHGTGTPLGDP 314 (421)
T ss_pred EEEeeCCCCCCCCH
Confidence 99999988765543
No 54
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.27 E-value=1.4e-09 Score=113.67 Aligned_cols=228 Identities=15% Similarity=0.099 Sum_probs=134.3
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc--CCC---h-hhhh-hhhcCeE---EecCCC-----CCCHHHHHHHHHHHHHHH
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD--GAS---K-GKYT-IGLGQEC---MAFCSE-----VEDVISMSLTAVTNLLEK 67 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~---~-~k~~-~Gig~r~---~av~~~-----~Ed~~~la~~Aa~~aL~~ 67 (465)
|.|.|.++|+..|--. +.+++.+.. |.+ + .++. .++..+. +-+.+. ......|++.|++++|++
T Consensus 11 ~~VvITG~G~vs~~G~-~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~aa~~Al~d 89 (425)
T PRK06501 11 PIVAVTGMGVVTSLGQ-GKADNWAALTAGESGIHTITRFPTEGLRTRIAGTVDFLPESPFGASALSEALARLAAEEALAQ 89 (425)
T ss_pred cCEEEEeeeEECCCCC-CHHHHHHHHHcCCCceEcCCcccccCCCCceEEEEeecccccccccCHHHHHHHHHHHHHHHH
Confidence 3599999999998765 556554442 221 1 1110 1111100 000000 112356889999999999
Q ss_pred CCCCcCCcc------------------EEEEEeecC---------------CC-------CcccHHHHHHHHhcccCCCC
Q 012353 68 YKIDPKQIG------------------RLEVGSETV---------------ID-------KSKSIKTFLMQIFEKFGNTD 107 (465)
Q Consensus 68 agi~~~~Id------------------~li~~T~s~---------------~~-------~~ps~a~~l~~~LGl~g~~~ 107 (465)
+|+++.+++ .++.++... .. ..++.+..|+..||+ +
T Consensus 90 Agl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl----~ 165 (425)
T PRK06501 90 AGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSIADRLADRFGT----R 165 (425)
T ss_pred cCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHHHHHHHHHhCC----C
Confidence 998643321 122222111 11 234688899999997 3
Q ss_pred ceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc---------------c-ccCC-----------CCCccc
Q 012353 108 IEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA---------------V-YAEG-----------PARPTG 160 (465)
Q Consensus 108 ~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~---------------~-y~~~-----------~~~~t~ 160 (465)
..++++..+|++++.||..|..+|++|.+ +.+||+++|.. . ..+. ....++
T Consensus 166 G~~~~i~~aCaS~~~Al~~A~~~I~~G~~--d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~r~G~v~ 243 (425)
T PRK06501 166 GLPISLSTACASGATAIQLGVEAIRRGET--DRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFSKDRDGFVM 243 (425)
T ss_pred CCceeecCccHHHHHHHHHHHHHHHcCCC--CEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCCCCCCCCeee
Confidence 45689999999999999999999999987 99999999941 0 0111 112468
Q ss_pred ccceeeeeecCCCCc-----ccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCC
Q 012353 161 GAAAVVMLVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQ 235 (465)
Q Consensus 161 GdGA~A~Ll~~~~~~-----~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~ 235 (465)
|+||+|+||++.... .+...+.++... ...+... .+..++. .+..++++.+++. +
T Consensus 244 GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~-~d~~~~~-----~~~~~~~--------~~~~ai~~AL~~a------g 303 (425)
T PRK06501 244 AEGAGALVLESLESAVARGAKILGIVAGCGEK-ADSFHRT-----RSSPDGS--------PAIGAIRAALADA------G 303 (425)
T ss_pred eccEEEEEECcHHHHHHCCCeEEEEEEEEEEc-cCCCCCC-----CCCCCHH--------HHHHHHHHHHHHc------C
Confidence 999999999985321 111111122111 0111111 0111221 2334444444443 7
Q ss_pred CCCCCCceeeccCCchHHHHHH
Q 012353 236 FSLSNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 236 ~~~~did~~~~H~p~~km~~~~ 257 (465)
+.++|||++.+|..++.....+
T Consensus 304 i~p~dId~i~~Hgtgt~~~d~~ 325 (425)
T PRK06501 304 LTPEQIDYINAHGTSTPENDKM 325 (425)
T ss_pred CCHHHcCEEEecCccCcchHHH
Confidence 8999999999999988876654
No 55
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.26 E-value=1.7e-11 Score=126.59 Aligned_cols=97 Identities=10% Similarity=0.126 Sum_probs=87.5
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHH
Q 012353 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (465)
Q Consensus 49 ~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~ 128 (465)
.+++..+|+++|++++|+++|++++|||.|++++.++....|..+..++..||+ ..++.++++.++|.+++.||.+|.
T Consensus 18 ~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl--~~~~~~~~v~~~c~s~~~al~~A~ 95 (386)
T cd00751 18 KDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGL--PESVPATTVNRVCGSGLQAVALAA 95 (386)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCC--CCCCchhhhccccHHHHHHHHHHH
Confidence 368899999999999999999999999999999887766677778889999997 345789999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEEeccc
Q 012353 129 NWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 129 ~~l~sg~~~~~~aLVVasD~~ 149 (465)
.+|++|.+ +.|||+++|..
T Consensus 96 ~~I~sG~~--~~vLv~g~e~~ 114 (386)
T cd00751 96 QSIAAGEA--DVVVAGGVESM 114 (386)
T ss_pred HHHHCCCC--CeEEEeeeecc
Confidence 99999987 99999999975
No 56
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.24 E-value=3.6e-11 Score=124.04 Aligned_cols=96 Identities=13% Similarity=0.167 Sum_probs=86.7
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~ 129 (465)
+++..+|+.+|++++|+++|++++|||.|++++.++....|..+..++..+|+ ..++.++++.++|++++.||..|..
T Consensus 18 ~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl--~~~~~~~~v~~~Casg~~al~~A~~ 95 (386)
T TIGR01930 18 DVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGL--PESVPAYTVNRQCASGLQAVILAAQ 95 (386)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCC--CCCceeeeecchhhHHHHHHHHHHH
Confidence 58899999999999999999999999999999887665557778889999997 3457899999999999999999999
Q ss_pred HHHcCCCCCCEEEEEEeccc
Q 012353 130 WVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVasD~~ 149 (465)
+|++|.+ +.|||+++|..
T Consensus 96 ~I~sG~~--~~vLv~g~e~~ 113 (386)
T TIGR01930 96 LIRAGEA--DVVVAGGVESM 113 (386)
T ss_pred HHHCCCC--CEEEEEEehhh
Confidence 9999987 99999999975
No 57
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.23 E-value=1.1e-09 Score=113.60 Aligned_cols=179 Identities=16% Similarity=0.144 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCccE----EEEEeecCCC-----------------Ccc---------cHHHHHHHHhcc
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQIGR----LEVGSETVID-----------------KSK---------SIKTFLMQIFEK 102 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~Id~----li~~T~s~~~-----------------~~p---------s~a~~l~~~LGl 102 (465)
...|++.|++++|+++|+++++||. +++++..+.. ..| ..+.+|...||+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 3679999999999999999988886 6677643211 011 245678888887
Q ss_pred cCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc----------------ccCC-----------C
Q 012353 103 FGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV----------------YAEG-----------P 155 (465)
Q Consensus 103 ~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~----------------y~~~-----------~ 155 (465)
. ...+.+..+|++++.||..|..+|++|.+ +.+||+++|... +... .
T Consensus 151 ~----g~~~~v~~acaSg~~Al~~A~~~I~~G~~--d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~ 224 (407)
T TIGR03150 151 K----GPNHAVVTACATGTHAIGDAFRLIQRGDA--DVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDR 224 (407)
T ss_pred C----CcccccccHHHHHHHHHHHHHHHHhcCCC--CEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCC
Confidence 2 34566778999999999999999999977 999999999621 1000 0
Q ss_pred CCcccccceeeeeecCCCCc-----ccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhh
Q 012353 156 ARPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEK 230 (465)
Q Consensus 156 ~~~t~GdGA~A~Ll~~~~~~-----~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~ 230 (465)
...+.||||+|+||.+.+.. .+...+.+.... .|-+... -|..++. ....+++..+++.
T Consensus 225 ~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~--~d~~~~~----~~~~~~~--------~~~~ai~~Al~~A-- 288 (407)
T TIGR03150 225 DGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMS--GDAYHIT----APAPEGE--------GAARAMRAALKDA-- 288 (407)
T ss_pred CcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEC--CCCCCCC----CCCCCcH--------HHHHHHHHHHHHc--
Confidence 12457999999999875421 000012222111 1111100 0111221 1223444444443
Q ss_pred hhcCCCCCCCCceeeccCCchHHHHHH
Q 012353 231 LEGKQFSLSNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 231 ~~~~~~~~~did~~~~H~p~~km~~~~ 257 (465)
+++++|||++..|-.++...+.+
T Consensus 289 ----gi~~~dId~ve~h~tgt~~~D~~ 311 (407)
T TIGR03150 289 ----GINPEDVDYINAHGTSTPLGDKA 311 (407)
T ss_pred ----CCCHhHCCEEeCcCCCCCCCCHH
Confidence 78999999999999998554443
No 58
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.20 E-value=9.3e-10 Score=113.85 Aligned_cols=94 Identities=10% Similarity=0.114 Sum_probs=77.9
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcc---cHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSK---SIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFN 126 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~p---s~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~ 126 (465)
+.+..+|+.+|++++|+++|++|++||.|++++..+....+ +....+...++ .+++++++.++|++|..|+..
T Consensus 29 ~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~----~~~p~~~V~~~CaSg~~ai~~ 104 (394)
T PRK06445 29 NIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP----YNIPAMAVDRQCASSLTTVSI 104 (394)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC----CCCcchhhhhhhHHHHHHHHH
Confidence 56799999999999999999999999999999988754323 22222333332 468899999999999999999
Q ss_pred HHHHHHcCCCCCCEEEEEEeccc
Q 012353 127 CVNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 127 A~~~l~sg~~~~~~aLVVasD~~ 149 (465)
|...|++|.+ +.|||+++|..
T Consensus 105 A~~~I~sG~~--d~vLv~G~e~m 125 (394)
T PRK06445 105 GAMEIATGMA--DIVIAGGVEHM 125 (394)
T ss_pred HHHHHHcCCC--CEEEEeeeccc
Confidence 9999999987 99999999955
No 59
>PRK08256 lipid-transfer protein; Provisional
Probab=99.20 E-value=1.6e-09 Score=112.06 Aligned_cols=104 Identities=22% Similarity=0.139 Sum_probs=81.6
Q ss_pred hhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcC
Q 012353 38 GLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNAC 117 (465)
Q Consensus 38 Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC 117 (465)
|.++..+.-....++..+|++.|++++|+++|+++++||.+++++..+.... ...+...+|+ ..++++++..+|
T Consensus 7 G~~~t~~~~~~~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl---~~~~~~~v~~~c 80 (391)
T PRK08256 7 GVGMTPFEKPGASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGM---TGIPIVNVNNNC 80 (391)
T ss_pred eccccccccCCCCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCC---CCCCCccccccc
Confidence 4554444321124678999999999999999999999999999877654322 2245667886 446678899999
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc
Q 012353 118 YGGTAALFNCVNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 118 ~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~ 149 (465)
.+++.||..|..+|++|.+ +.|||+++|..
T Consensus 81 aSg~~ai~~A~~~I~sG~~--d~vLv~g~e~~ 110 (391)
T PRK08256 81 STGSTALFLARQAVRSGAA--DCALALGFEQM 110 (391)
T ss_pred HHHHHHHHHHHHHHHCCCC--CEEEEEEEeec
Confidence 9999999999999999987 99999887753
No 60
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.20 E-value=9.6e-11 Score=120.91 Aligned_cols=107 Identities=17% Similarity=0.156 Sum_probs=89.8
Q ss_pred hhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCc
Q 012353 37 IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNA 116 (465)
Q Consensus 37 ~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~a 116 (465)
.|+|+..+.- ..+++..+|+++|++++|+++|+++++||.||+++.++....+..+..++..||+ ++..++++.++
T Consensus 6 vG~g~t~~~~-~~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl---~~~~~~~v~~~ 81 (385)
T PRK12578 6 IGVGNSKFGR-RDDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGL---TGKVPLRVEAM 81 (385)
T ss_pred Eeecccceee-cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCC---CCCCeeEEecc
Confidence 4667665432 3578899999999999999999999999999999877643233457789999997 44567999999
Q ss_pred ChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc
Q 012353 117 CYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 117 C~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~ 149 (465)
|.+++.||..|...|++|.+ +.||||++|..
T Consensus 82 casg~~al~~A~~~I~sG~~--~~vLvvg~e~~ 112 (385)
T PRK12578 82 CATGLAASLTAYTAVASGLV--DMAIAVGVDKM 112 (385)
T ss_pred CHHHHHHHHHHHHHHHCCCC--CEEEEEEEeec
Confidence 99999999999999999977 99999999874
No 61
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.19 E-value=6.7e-11 Score=105.45 Aligned_cols=105 Identities=19% Similarity=0.260 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCcccc
Q 012353 215 MALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQ 294 (465)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 294 (465)
+.+...+..++++. ++...|+.+|++|++++++++.+.+.| +++.+
T Consensus 40 ~~i~~~~~~~L~~~------g~~~~~~~~wavHPGG~~ILd~v~~~L------------------------~L~~~---- 85 (151)
T PF02797_consen 40 DNIPPFVEDLLARH------GLSDWDILFWAVHPGGRKILDAVEEAL------------------------GLSPE---- 85 (151)
T ss_dssp HHHHHHHHHHHHGG------TCCSGGGSEEEEE-SSHHHHHHHHHHH------------------------TS-GG----
T ss_pred HHHHHHHHHHHhhh------cccccccceeeecCChHHHHHHHHHHc------------------------CCCHH----
Confidence 45666777777665 555446668999999999999999998 66654
Q ss_pred chhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHh---cCCCC---CCCEEEEEEeccchheeeeEE
Q 012353 295 SRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHN---KHSEL---DGKRVVLFSYGSGLTATMFSL 368 (465)
Q Consensus 295 d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~---~~~~~---~G~rill~syGsG~~~~~~~~ 368 (465)
++++|..+.+++|||+|++++..|..+++. .+... .++++++++||+|++.+++++
T Consensus 86 ------------------~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lL 147 (151)
T PF02797_consen 86 ------------------QLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLL 147 (151)
T ss_dssp ------------------GGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEE
T ss_pred ------------------HHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEE
Confidence 344555566999999999999999999882 12222 248999999999999999999
Q ss_pred EEe
Q 012353 369 KLS 371 (465)
Q Consensus 369 ~~~ 371 (465)
+-.
T Consensus 148 r~~ 150 (151)
T PF02797_consen 148 RSV 150 (151)
T ss_dssp EE-
T ss_pred eeC
Confidence 854
No 62
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.18 E-value=1e-11 Score=98.93 Aligned_cols=61 Identities=23% Similarity=0.199 Sum_probs=49.9
Q ss_pred EeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc-cCCC---CCcccccceeeeeecCCC
Q 012353 111 VDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGP---ARPTGGAAAVVMLVGPDA 173 (465)
Q Consensus 111 ~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~---~~~t~GdGA~A~Ll~~~~ 173 (465)
||++++|.|++.||++|..+|+++.. ++||||++|...- .+.. ..++|||||+|+||++++
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~--~~~Lvv~~d~~s~~~~~~~~~~~~~~gDgAaA~vl~~~~ 65 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRA--KNALVVGGDRLSRIVDRTDRQTAFIFGDGAAAVVLSRDE 65 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS---SEEEEEEEEEGGGGSHTTHHHHHTTB-EEEEEEEEEEES
T ss_pred CcccccchHHHHHHHHHHHHHhhccC--CEEEEEeeccccccccccccCcceeecchheEEEEEecC
Confidence 79999999999999999999999966 9999999999843 3322 346899999999999973
No 63
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.17 E-value=1.5e-10 Score=119.76 Aligned_cols=99 Identities=11% Similarity=0.125 Sum_probs=87.9
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHH
Q 012353 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (465)
Q Consensus 49 ~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~ 128 (465)
.+++..+|+.+|++++|+++|+++++||.|++++.++....+..+..++..+|+ ...+++++++++|++|..|+.+|.
T Consensus 22 ~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl--~~~~p~~~V~~~Casg~~ai~~A~ 99 (393)
T PRK05656 22 ANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGL--PHSVPAMTLNKVCGSGLKALHLAA 99 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCC--CCCcceEEecccchhHHHHHHHHH
Confidence 367899999999999999999999999999999988654456677889999997 334789999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEEeccccc
Q 012353 129 NWVESSSWDGRYGLVVCTDSAVY 151 (465)
Q Consensus 129 ~~l~sg~~~~~~aLVVasD~~~y 151 (465)
.+|++|.+ +.|||+++|..+.
T Consensus 100 ~~I~sG~~--d~vLv~G~E~ms~ 120 (393)
T PRK05656 100 QAIRCGDA--EVIIAGGQENMSL 120 (393)
T ss_pred HHHHcCCC--CEEEEEEEhhhcc
Confidence 99999977 9999999998743
No 64
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.16 E-value=1.2e-10 Score=120.04 Aligned_cols=106 Identities=17% Similarity=0.109 Sum_probs=86.6
Q ss_pred hhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCc--ccHHHHHHHHhcccCCCCceeEeec
Q 012353 37 IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKS--KSIKTFLMQIFEKFGNTDIEGVDST 114 (465)
Q Consensus 37 ~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~--ps~a~~l~~~LGl~g~~~~~~~di~ 114 (465)
+|+|+..+.....+++..+|+++|++++|+++|++++|||.|+++| +++... ...+..|++.||+ ....++++.
T Consensus 8 vG~g~t~~~~~~~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl---~~~~~~~v~ 83 (386)
T PRK08313 8 LGTGQTKYVAKRQDVSMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGA---TGKPLIRVH 83 (386)
T ss_pred EEeecCCcCccCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCC---CCCceEEEe
Confidence 4677655411135788999999999999999999999999999987 443321 1234689999997 456789999
Q ss_pred CcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecc
Q 012353 115 NACYGGTAALFNCVNWVESSSWDGRYGLVVCTDS 148 (465)
Q Consensus 115 ~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~ 148 (465)
++|.++..+++.|..+|++|.+ ++||||++|.
T Consensus 84 ~~casg~~al~~A~~~I~sG~~--~~vLVvg~e~ 115 (386)
T PRK08313 84 TAGSVGGSTAVVAASLVQSGVY--RRVLAVAWEK 115 (386)
T ss_pred ccCHHHHHHHHHHHHHHHCCCC--CEEEEEEEEE
Confidence 9999999999999999999977 9999999985
No 65
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.14 E-value=1.9e-09 Score=112.20 Aligned_cols=177 Identities=18% Similarity=0.122 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHHHHCCCC---cCCccEEEEEeec---------------CCCCcc---------cHHHHHHHHhcccCC
Q 012353 53 VISMSLTAVTNLLEKYKID---PKQIGRLEVGSET---------------VIDKSK---------SIKTFLMQIFEKFGN 105 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~---~~~Id~li~~T~s---------------~~~~~p---------s~a~~l~~~LGl~g~ 105 (465)
...|++.|++++|+++|++ +++|+.++.++.. +....| ..+..|...||+.
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~-- 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR-- 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC--
Confidence 4579999999999999986 4566665543321 111112 2556788899972
Q ss_pred CCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc-c------c-----------cCCC-----------C
Q 012353 106 TDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------Y-----------AEGP-----------A 156 (465)
Q Consensus 106 ~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~------y-----------~~~~-----------~ 156 (465)
.+++.+..+|++++.||..|..+|++|.+ +.|||+++|.. . + ...+ +
T Consensus 158 --G~~~tv~~acas~~~Al~~A~~~I~~G~~--d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~d 233 (410)
T PRK07103 158 --GEGFTVGGASASGQLAVIQAARLVQSGSV--DACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRD 233 (410)
T ss_pred --CCcccccchhHHHHHHHHHHHHHHHcCCC--CEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCCC
Confidence 34577899999999999999999999987 99999998742 0 0 0000 1
Q ss_pred CcccccceeeeeecCCCCc-----ccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhh
Q 012353 157 RPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL 231 (465)
Q Consensus 157 ~~t~GdGA~A~Ll~~~~~~-----~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~ 231 (465)
..+.|+||+|+||++.+.. .+...+.|+.... |-+.. .-| ++ ....++++..+++.
T Consensus 234 G~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~--d~~~~----~~p--~~--------~~~~~a~~~Al~~A--- 294 (410)
T PRK07103 234 GFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRL--DANRG----PDP--SL--------EGEMRVIRAALRRA--- 294 (410)
T ss_pred CeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEec--CCCCC----CCC--CH--------HHHHHHHHHHHHHc---
Confidence 2357999999999975321 1111122222211 11110 011 11 11123334444443
Q ss_pred hcCCCCCCCCceeeccCCchHHHHHH
Q 012353 232 EGKQFSLSNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 232 ~~~~~~~~did~~~~H~p~~km~~~~ 257 (465)
++.++|||++..|..++...+..
T Consensus 295 ---gi~~~dId~v~~hgtgt~~~D~~ 317 (410)
T PRK07103 295 ---GLGPEDIDYVNPHGTGSPLGDET 317 (410)
T ss_pred ---CCCHHHCCEEEccCCCCCCCCHH
Confidence 78999999999999998865544
No 66
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.13 E-value=2.4e-10 Score=118.00 Aligned_cols=98 Identities=8% Similarity=0.047 Sum_probs=85.3
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHH
Q 012353 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (465)
Q Consensus 49 ~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~ 128 (465)
.+++..+|+.+|++++|+++|++|++||.||+++.++.......+..++..+|+ ..++++++++++|++|..||.+|.
T Consensus 22 ~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl--~~~~p~~~V~~~CaSg~~Al~~A~ 99 (393)
T PRK08235 22 KDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGI--PWEVQTETVNKVCASGLRAVTLAD 99 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCC--CCCcceeehhhhhhHHHHHHHHHH
Confidence 378899999999999999999999999999999887532233455567888997 457899999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEEecccc
Q 012353 129 NWVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 129 ~~l~sg~~~~~~aLVVasD~~~ 150 (465)
.+|++|.+ +.|||+++|..+
T Consensus 100 ~~I~sG~~--d~vLvvG~E~ms 119 (393)
T PRK08235 100 QIIRAGDA--SVIVAGGMESMS 119 (393)
T ss_pred HHHHCCCC--CEEEEEeeeccc
Confidence 99999977 999999999764
No 67
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.13 E-value=2.2e-10 Score=118.85 Aligned_cols=97 Identities=15% Similarity=0.161 Sum_probs=89.1
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~ 129 (465)
+++..+|+.+|++++|+++|+++++||.|++++.++....+..+..++..+|+ ..++++++++++|.+|..||..|..
T Consensus 23 ~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl--~~~~p~~~V~~~CaSg~~Al~~A~~ 100 (404)
T PRK06205 23 DVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGL--PVTVPGMQLDRRCGSGLQAVITAAM 100 (404)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCC--CCCCceeehhhhhhHHHHHHHHHHH
Confidence 68899999999999999999999999999999998877777888889999997 4468899999999999999999999
Q ss_pred HHHcCCCCCCEEEEEEecccc
Q 012353 130 WVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVasD~~~ 150 (465)
+|++|.+ +.|||+++|..+
T Consensus 101 ~I~sG~~--d~vLv~G~E~ms 119 (404)
T PRK06205 101 QVQTGAA--DVVIAGGAESMS 119 (404)
T ss_pred HHHcCCC--CEEEEeeehhhc
Confidence 9999977 999999999874
No 68
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.12 E-value=2.8e-10 Score=117.46 Aligned_cols=99 Identities=12% Similarity=0.134 Sum_probs=89.2
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCccc-HHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHH
Q 012353 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKS-IKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (465)
Q Consensus 49 ~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps-~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A 127 (465)
.++...+|+.+|++++|+++|++|++||.|++++.++....++ .+..+...+|+ +.++++++++++|++|..||.+|
T Consensus 23 ~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl--~~~~p~~~V~~aCaSg~~Al~~A 100 (392)
T PRK07108 23 NMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGL--PVTVPGMTVNRFCSSGLQTIALA 100 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCC--CCCCceeeecchhhHHHHHHHHH
Confidence 4677899999999999999999999999999999887766554 78888888997 45689999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEEeccccc
Q 012353 128 VNWVESSSWDGRYGLVVCTDSAVY 151 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~~y 151 (465)
..+|++|.+ +.+||++.|.++.
T Consensus 101 ~~~I~sG~~--d~vlagGvE~ms~ 122 (392)
T PRK07108 101 AQRVIAGEG--DVFVAGGVESISC 122 (392)
T ss_pred HHHHHCCCC--CEEEEEEEeccCC
Confidence 999999977 9999999998853
No 69
>PRK06059 lipid-transfer protein; Provisional
Probab=99.09 E-value=4.5e-10 Score=116.46 Aligned_cols=105 Identities=16% Similarity=0.104 Sum_probs=87.2
Q ss_pred hhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCC-cccHHHHHHHHhcccCCCCceeEeecCc
Q 012353 38 GLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNA 116 (465)
Q Consensus 38 Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~a 116 (465)
|.+...+. ..+++..+|+++|++++|+++|+++++||.|++++..+... .+..+..|++.||+ .+++++++.++
T Consensus 10 g~~~t~~~--r~~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~---~~~~~~~v~~~ 84 (399)
T PRK06059 10 GAGMHPWG--KWGRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGW---NGAPVSSSYAA 84 (399)
T ss_pred EecccccC--CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCC---CCCceecccch
Confidence 44444332 23577899999999999999999999999999887665433 34567889999996 45778999999
Q ss_pred ChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc
Q 012353 117 CYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 117 C~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~ 149 (465)
|++++.||.+|..+|++|.+ +.||||++|..
T Consensus 85 Casg~~al~~A~~~I~sG~~--~~vLvvg~e~~ 115 (399)
T PRK06059 85 CASGSQALQSARAQILAGLC--DVALVVGADTT 115 (399)
T ss_pred hHHHHHHHHHHHHHHHCCCC--CEEEEEEEccc
Confidence 99999999999999999977 99999999964
No 70
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.09 E-value=5.3e-10 Score=115.66 Aligned_cols=97 Identities=12% Similarity=0.098 Sum_probs=83.6
Q ss_pred CCCHHHHHHHHHHHHHHHC-CCCcCCccEEEEEeecCCCCcccHHHHH-HHHhcccCCCCceeEeecCcChhHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKY-KIDPKQIGRLEVGSETVIDKSKSIKTFL-MQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~a-gi~~~~Id~li~~T~s~~~~~ps~a~~l-~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A 127 (465)
+++..+|+.+|++++|+++ |+++++||.||+++.++....+.....+ ...+|+ ...+++++|+++|.+|..|+..|
T Consensus 28 ~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl--~~~~p~~~V~~aCaSg~~Al~~A 105 (399)
T PRK09052 28 NTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGL--PNSVGGVTVNRFCASGLQAVAMA 105 (399)
T ss_pred CCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCC--CCCCceeeecchhhHHHHHHHHH
Confidence 5789999999999999997 9999999999999888765555555554 445576 33588999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEEecccc
Q 012353 128 VNWVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~~ 150 (465)
..+|++|.+ +.|||+++|..+
T Consensus 106 ~~~I~sG~~--d~vLv~G~E~mS 126 (399)
T PRK09052 106 ADRIRVGEA--DVMIAAGVESMS 126 (399)
T ss_pred HHHHHCCCC--CEEEEEEEeccc
Confidence 999999977 999999999764
No 71
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.08 E-value=3.2e-08 Score=103.14 Aligned_cols=227 Identities=15% Similarity=0.136 Sum_probs=134.8
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc--CCC---h-hhhh-hhhcCeEEecCC---------C----CCC-HHHHHHHHH
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD--GAS---K-GKYT-IGLGQECMAFCS---------E----VED-VISMSLTAV 61 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~---~-~k~~-~Gig~r~~av~~---------~----~Ed-~~~la~~Aa 61 (465)
++|-|.++++..|--. +.+++.+.. |.+ + .++. ..+..+.-...+ . .-| ...+++.|+
T Consensus 4 ~~VvItG~g~~~p~g~-~~~~~w~~L~~g~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l~a~ 82 (414)
T PRK08722 4 RRVVVTGMGMLSPVGN-TVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEYMSKKDARKMDLFIQYGIAAG 82 (414)
T ss_pred CCEEEEeeEEECCCCC-CHHHHHHHHHhCCCeeeecCccccccCCCceeEEcCCCChhHcCCHHHHhhcCHHHHHHHHHH
Confidence 5799999999999874 666665542 221 1 1110 011001000000 0 001 235888999
Q ss_pred HHHHHHCCCCcCCcc----EEEEEeecCCC-----------------Cc--------c-cHHHHHHHHhcccCCCCceeE
Q 012353 62 TNLLEKYKIDPKQIG----RLEVGSETVID-----------------KS--------K-SIKTFLMQIFEKFGNTDIEGV 111 (465)
Q Consensus 62 ~~aL~~agi~~~~Id----~li~~T~s~~~-----------------~~--------p-s~a~~l~~~LGl~g~~~~~~~ 111 (465)
.++|+++|+++.+.+ .|+++|..+.. .. + .++.+|...+|+.| +.+
T Consensus 83 ~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~G----p~~ 158 (414)
T PRK08722 83 IQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRG----PNI 158 (414)
T ss_pred HHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCCC----Ccc
Confidence 999999999754333 35666653211 01 1 36778888999732 456
Q ss_pred eecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-------cc---------C---CCCC--------cccccce
Q 012353 112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------YA---------E---GPAR--------PTGGAAA 164 (465)
Q Consensus 112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y~---------~---~~~~--------~t~GdGA 164 (465)
.+..+|++++.||..|..+|++|.. +.+||+++|... |. + ...+ ...||||
T Consensus 159 ti~~aCas~~~Al~~A~~~i~~G~~--d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~~~gEGa 236 (414)
T PRK08722 159 AISTACTTGLHNIGHAARMIAYGDA--DAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGA 236 (414)
T ss_pred ccccccHHHHHHHHHHHHHHHcCCC--CEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCCCceEeeceE
Confidence 7789999999999999999999987 999999999741 10 0 0112 2369999
Q ss_pred eeeeecCCCCc-----ccccccccccc-cCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 012353 165 VVMLVGPDAPV-----AFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSL 238 (465)
Q Consensus 165 ~A~Ll~~~~~~-----~~~~~~~~~~~-~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (465)
+++||.+.... .+...+.+... .+...+..|. .+++ ....+++..+++. ++++
T Consensus 237 aalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~-------~~~~--------~~~~a~~~Al~~a------gi~~ 295 (414)
T PRK08722 237 GMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPS-------EDGS--------GGALAMEAAMRDA------GVTG 295 (414)
T ss_pred EEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCC-------cchH--------HHHHHHHHHHHHc------CCCH
Confidence 99999975321 01001222211 1222222332 1232 1122333333433 7899
Q ss_pred CCCceeeccCCchHHHHHH
Q 012353 239 SNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 239 ~did~~~~H~p~~km~~~~ 257 (465)
+|||++..|..++...+.+
T Consensus 296 ~did~ie~hgtgt~~~D~~ 314 (414)
T PRK08722 296 EQIGYVNAHGTSTPAGDVA 314 (414)
T ss_pred HHcCEEEccCccCCCCCHH
Confidence 9999999999988766654
No 72
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.07 E-value=2.5e-08 Score=102.58 Aligned_cols=223 Identities=14% Similarity=0.176 Sum_probs=131.7
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc--CCC---h-hhhh--hhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCc--
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD--GAS---K-GKYT--IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDP-- 72 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~---~-~k~~--~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~-- 72 (465)
++|-|.++|+..|--. .+++.+.. |.+ + ..|. ....-.... ........++..|++++|+++|+++
T Consensus 2 ~rVvITG~G~vsp~G~--~~~~~~~l~~G~sgi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~Al~dagl~~~~ 77 (381)
T PRK05952 2 MKVVVTGIGLVSALGD--LEQSWQRLLQGKSGIKLHQPFPELPPLPLGLIG--NQPSSLEDLTKTVVTAALKDAGLTPPL 77 (381)
T ss_pred CeEEEEeeEEECcccC--HHHHHHHHHcCCCCeEeCCcccccccccceeec--cccccccHHHHHHHHHHHHhcCCCCCC
Confidence 4799999999999886 55544432 221 1 0110 000000000 0011233467789999999999864
Q ss_pred CCccEEEEEeecCC--------------------CCc--------c-cHHHHHHHHhcccCCCCceeEeecCcChhHHHH
Q 012353 73 KQIGRLEVGSETVI--------------------DKS--------K-SIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAA 123 (465)
Q Consensus 73 ~~Id~li~~T~s~~--------------------~~~--------p-s~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~A 123 (465)
++++ |+++|..+. +.. | ..+..|...+|+.| +.+.+..+|++++.|
T Consensus 78 ~~~G-v~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~G----p~~ti~~aCasg~~A 152 (381)
T PRK05952 78 TDCG-VVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQG----PVLAPMAACATGLWA 152 (381)
T ss_pred CCEE-EEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCC----ccccccchhHHHHHH
Confidence 4454 455664321 101 1 24667888898733 456778999999999
Q ss_pred HHHHHHHHHcCCCCCCEEEEEEeccc-c------cc------CC--------CCCcccccceeeeeecCCCCc-----cc
Q 012353 124 LFNCVNWVESSSWDGRYGLVVCTDSA-V------YA------EG--------PARPTGGAAAVVMLVGPDAPV-----AF 177 (465)
Q Consensus 124 L~~A~~~l~sg~~~~~~aLVVasD~~-~------y~------~~--------~~~~t~GdGA~A~Ll~~~~~~-----~~ 177 (465)
|..|..+|++|.. +.+||.++|.. . +. .. .+....|+||+++||++.+.. .+
T Consensus 153 i~~A~~~i~~G~~--d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r~G~v~gEGaa~lvLe~~~~A~~rg~~i 230 (381)
T PRK05952 153 IAQGVELIQTGQC--QRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQREGLVLGEGGAILVLESAELAQKRGAKI 230 (381)
T ss_pred HHHHHHHHHcCCC--CEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCCCCccccccEEEEEEeeHHHHHhCCCce
Confidence 9999999999977 99999999962 1 10 01 112457999999999975321 11
Q ss_pred cccccccccc-CcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHH
Q 012353 178 ESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQK 256 (465)
Q Consensus 178 ~~~~~~~~~~-~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~ 256 (465)
...+.|.... +...... |..+++ ...++++..+++. ++.++|||++..|...++..+.
T Consensus 231 ~a~I~g~~~~~d~~~~~~-------~~~~~~--------~~~~ai~~Al~~a------gi~p~dId~i~~hgtgt~~~D~ 289 (381)
T PRK05952 231 YGQILGFGLTCDAYHMSA-------PEPDGK--------SAIAAIQQCLARS------GLTPEDIDYIHAHGTATRLNDQ 289 (381)
T ss_pred EEEEEEEEecCCCCCCCC-------CCCCHH--------HHHHHHHHHHHHh------CCCHHHeeEEEccCCCCCCCcH
Confidence 1112222211 1111111 112222 2233444444444 7889999999999998877665
Q ss_pred H
Q 012353 257 S 257 (465)
Q Consensus 257 ~ 257 (465)
+
T Consensus 290 ~ 290 (381)
T PRK05952 290 R 290 (381)
T ss_pred H
Confidence 4
No 73
>PRK05790 putative acyltransferase; Provisional
Probab=99.07 E-value=6.8e-10 Score=114.92 Aligned_cols=96 Identities=9% Similarity=0.102 Sum_probs=82.2
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~ 129 (465)
+++..+|+++|++++|+++|+++++||.|++++.++....+..+..++..+|+ ..++.++++.++|+++..||..|..
T Consensus 23 ~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl--~~~~~~~~v~~~Casg~~al~~A~~ 100 (393)
T PRK05790 23 DVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGL--PVEVPALTINKVCGSGLKAVALAAQ 100 (393)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCC--CCCCceeeecccchHHHHHHHHHHH
Confidence 58899999999999999999999999999999876543334445556667786 3357889999999999999999999
Q ss_pred HHHcCCCCCCEEEEEEeccc
Q 012353 130 WVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVasD~~ 149 (465)
+|++|.+ +.|||+++|..
T Consensus 101 ~I~sG~~--d~vLv~G~e~~ 118 (393)
T PRK05790 101 AIRAGDA--DIVVAGGQESM 118 (393)
T ss_pred HHHcCCC--CEEEEEeeecc
Confidence 9999977 99999999975
No 74
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.07 E-value=7.4e-10 Score=114.44 Aligned_cols=98 Identities=13% Similarity=0.118 Sum_probs=85.5
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCc-ccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHH
Q 012353 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKS-KSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (465)
Q Consensus 49 ~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~-ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A 127 (465)
.+..+.+|+..|++++|+++|++|++||.||+++.++.... +..+......+|+ ..++++++|+++|++|+.||.+|
T Consensus 24 ~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl--~~~~pa~~Vn~aCaSg~~Ai~~A 101 (402)
T PRK08242 24 HEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGL--PETVPGVQINRFCASGLEAVNLA 101 (402)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCC--CCCCCeEEEcchhhhHHHHHHHH
Confidence 46789999999999999999999999999999999875432 3455556677787 46799999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEEecccc
Q 012353 128 VNWVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~~ 150 (465)
..+|++|.. +.+||+++|..+
T Consensus 102 ~~~I~sG~~--d~vLv~G~E~mS 122 (402)
T PRK08242 102 AAKVRSGWD--DLVIAGGVESMS 122 (402)
T ss_pred HHHHHcCCC--CEEEEEEEEccC
Confidence 999999977 999999999874
No 75
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.05 E-value=6.2e-08 Score=100.64 Aligned_cols=223 Identities=13% Similarity=0.102 Sum_probs=131.2
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc--CCC---h-hhhh--hhhcCeEEecCCC-------------C-CCHHHHHHHH
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD--GAS---K-GKYT--IGLGQECMAFCSE-------------V-EDVISMSLTA 60 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~---~-~k~~--~Gig~r~~av~~~-------------~-Ed~~~la~~A 60 (465)
++|-|.+||+..|--. +.+++.+.. |.+ + .++. .++..+.-...++ . ....-|++.|
T Consensus 2 ~~VvITG~g~vtp~G~-~~~~~~~~L~~g~s~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~~~~~al~a 80 (405)
T PRK09116 2 RRVVVTGMGGVTALGE-DWQTIAARLKAGRNAVRRMPEWDRYDGLNTRLAAPIDDFELPAHYTRKKIRSMGRVSLMATRA 80 (405)
T ss_pred CCEEEEeeEEECCCCC-CHHHHHHHHHcCCCCEEeCCchhhccCCCCceEEEecCcChhHhcCHHHHhhCCHHHHHHHHH
Confidence 6899999999999874 566554432 221 1 0010 0111111111110 0 1235689999
Q ss_pred HHHHHHHCCCCc------CCccEEEEEeecCCC-----------------Cc--------c-cHHHHHHHHhcccCCCCc
Q 012353 61 VTNLLEKYKIDP------KQIGRLEVGSETVID-----------------KS--------K-SIKTFLMQIFEKFGNTDI 108 (465)
Q Consensus 61 a~~aL~~agi~~------~~Id~li~~T~s~~~-----------------~~--------p-s~a~~l~~~LGl~g~~~~ 108 (465)
++++|+++|++. +++ .|+++|..+.. .. | ..+..|...+|+.|
T Consensus 81 a~~Al~dAGl~~~~~~~~~r~-Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G---- 155 (405)
T PRK09116 81 SELALEDAGLLGDPILTDGRM-GIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGLKG---- 155 (405)
T ss_pred HHHHHHHcCCCCccccCCCcE-EEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCCCC----
Confidence 999999999832 233 34566643210 11 2 25677888999733
Q ss_pred eeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc------c------c--C-C---CCC--------ccccc
Q 012353 109 EGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV------Y------A--E-G---PAR--------PTGGA 162 (465)
Q Consensus 109 ~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~------y------~--~-~---~~~--------~t~Gd 162 (465)
+.+-+..+|++++.||..|..+|++|.. +.+||.++|... + . . . ..+ ...|+
T Consensus 156 p~~ti~~acas~~~Al~~A~~~I~~G~~--d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~~G~v~gE 233 (405)
T PRK09116 156 RVIPTSSACTSGSQGIGYAYEAIKYGYQ--TVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANRDGLVIGE 233 (405)
T ss_pred CcccccchhhhHHHHHHHHHHHHHcCCC--CEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCCCCEeeec
Confidence 4566789999999999999999999987 999999999631 1 0 0 0 112 34699
Q ss_pred ceeeeeecCCCCc-----cccccccccccc-CcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 012353 163 AAVVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQF 236 (465)
Q Consensus 163 GA~A~Ll~~~~~~-----~~~~~~~~~~~~-~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~ 236 (465)
||+++||++.... .+...+.|.... +......| ++ +.+..+++..+++. ++
T Consensus 234 Ga~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p---------~~--------~~~~~ai~~AL~~A------gi 290 (405)
T PRK09116 234 GAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQP---------QA--------ETMQIAMELALKDA------GL 290 (405)
T ss_pred cEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCC---------CH--------HHHHHHHHHHHHHh------CC
Confidence 9999999974311 111012222111 11111111 11 22334555555554 78
Q ss_pred CCCCCceeeccCCchHHHHH
Q 012353 237 SLSNADYFVFHSPYNKLVQK 256 (465)
Q Consensus 237 ~~~did~~~~H~p~~km~~~ 256 (465)
.++|||++.+|...+...+.
T Consensus 291 ~p~dId~I~~Hgtgt~~~D~ 310 (405)
T PRK09116 291 APEDIGYVNAHGTATDRGDI 310 (405)
T ss_pred CHHHcCEEECcCccCCCCCH
Confidence 99999999999987765444
No 76
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=99.03 E-value=1.2e-09 Score=113.99 Aligned_cols=97 Identities=11% Similarity=0.119 Sum_probs=85.9
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~ 129 (465)
+.+..+|+.+|++++|+++|+++++||.|++++.++....+..+..++..+|+ ..++++++++++|++++.||.+|..
T Consensus 24 ~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl--~~~~p~~~v~~~CaSg~~al~~A~~ 101 (426)
T PRK08170 24 PFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGC--GEKVPAWTVQRNCASGMQALDSAAA 101 (426)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCc--CCCceeeeccchhhHHHHHHHHHHH
Confidence 46889999999999999999999999999999877544445677889999997 4468899999999999999999999
Q ss_pred HHHcCCCCCCEEEEEEecccc
Q 012353 130 WVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVasD~~~ 150 (465)
+|++|.+ +.|||+++|..+
T Consensus 102 ~I~sG~~--d~vLv~G~E~ms 120 (426)
T PRK08170 102 NIALGRA--DLVLAGGVEAMS 120 (426)
T ss_pred HHHCCCC--CEEEEEEEeccc
Confidence 9999977 999999999763
No 77
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.02 E-value=1.9e-08 Score=104.75 Aligned_cols=228 Identities=14% Similarity=0.117 Sum_probs=135.5
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc--CCC---h-hhhh-hhhcCeEEe-cC--------CCC-----CCHHHHHHHHH
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD--GAS---K-GKYT-IGLGQECMA-FC--------SEV-----EDVISMSLTAV 61 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~---~-~k~~-~Gig~r~~a-v~--------~~~-----Ed~~~la~~Aa 61 (465)
++|-|.+++..+|--. +.+++.+.. |.+ + .++. .+...+... ++ ++. .....|++.|+
T Consensus 2 ~~v~ItG~g~~~p~g~-~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~aa 80 (411)
T PRK07314 2 RRVVVTGLGAVSPLGN-DVESTWKNLLAGKSGIGPITHFDTSDLAVKIAGEVKDFNPDDYMSRKEARRMDRFIQYGIAAA 80 (411)
T ss_pred CcEEEEcceEECCCcC-CHHHHHHHHHhCCCcEEECCcccccCCCccEEEEeCCcChhhcCCHHHhhcCCHHHHHHHHHH
Confidence 6799999999999764 666654432 221 0 1110 000000000 10 110 12467899999
Q ss_pred HHHHHHCCCCcCCcc----EEEEEeecCCC-----------------C--------c-ccHHHHHHHHhcccCCCCceeE
Q 012353 62 TNLLEKYKIDPKQIG----RLEVGSETVID-----------------K--------S-KSIKTFLMQIFEKFGNTDIEGV 111 (465)
Q Consensus 62 ~~aL~~agi~~~~Id----~li~~T~s~~~-----------------~--------~-ps~a~~l~~~LGl~g~~~~~~~ 111 (465)
+++|+++|++++++| .++++|..+.. . . ...+.+|...||+. -..+
T Consensus 81 ~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~----Gp~~ 156 (411)
T PRK07314 81 KQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAK----GPNH 156 (411)
T ss_pred HHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCCC----Cccc
Confidence 999999999998888 47777653210 0 1 12556788899873 2445
Q ss_pred eecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-------c---------cCC-----------CCCcccccce
Q 012353 112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------Y---------AEG-----------PARPTGGAAA 164 (465)
Q Consensus 112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y---------~~~-----------~~~~t~GdGA 164 (465)
-+..+|++++.||..|..+|++|.+ +.|||.++|... + ... .+....||||
T Consensus 157 tv~~acaSgl~Al~~A~~~I~~G~~--d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dG~~~geGA 234 (411)
T PRK07314 157 SIVTACATGAHAIGDAARLIAYGDA--DVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMGEGA 234 (411)
T ss_pred cchhhhHHHHHHHHHHHHHHhcCCC--CEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCCCCEeEEceE
Confidence 6678999999999999999999987 999999998631 0 000 0124579999
Q ss_pred eeeeecCCCCc-----ccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCC
Q 012353 165 VVMLVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLS 239 (465)
Q Consensus 165 ~A~Ll~~~~~~-----~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (465)
+|+||.+.+.. .+...+.|.... .|-+... .|...+. ....+++..+++. ++.++
T Consensus 235 aavvL~~~~~A~~~g~~~~a~I~g~~~~--~d~~~~~----~~~~~~~--------~~~~a~~~Al~~a------gi~~~ 294 (411)
T PRK07314 235 GILVLEELEHAKARGAKIYAEVVGYGMT--GDAYHMT----APAPDGE--------GAARAMKLALKDA------GINPE 294 (411)
T ss_pred EEEEEeeHHHHHHCCCeEEEEEEEEEEc--CCCCCCC----CCCCCcH--------HHHHHHHHHHHHc------CCCHH
Confidence 99999875311 100012222111 1111111 1111221 1112334444443 79999
Q ss_pred CCceeeccCCchHHHHHH
Q 012353 240 NADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 240 did~~~~H~p~~km~~~~ 257 (465)
|||++..|..++...+..
T Consensus 295 dId~v~~hgtgt~~~d~~ 312 (411)
T PRK07314 295 DIDYINAHGTSTPAGDKA 312 (411)
T ss_pred HCCEEEccccCCccccHH
Confidence 999999999988766554
No 78
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.02 E-value=1.6e-08 Score=105.66 Aligned_cols=178 Identities=13% Similarity=0.088 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCc-c----EEEEEeecCCC---------------------Ccc-----cHHHHHHHHhc
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQI-G----RLEVGSETVID---------------------KSK-----SIKTFLMQIFE 101 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~I-d----~li~~T~s~~~---------------------~~p-----s~a~~l~~~LG 101 (465)
...|++.|++++|+++|++++++ + .++++|..+.. ..+ ..+.+|...||
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 161 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG 161 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence 35689999999999999987766 2 46667654321 011 24567888898
Q ss_pred ccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-------------cc----CC---C------
Q 012353 102 KFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------------YA----EG---P------ 155 (465)
Q Consensus 102 l~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------------y~----~~---~------ 155 (465)
+. -+++-+..+|++++.||..|..+|++|.+ +.+||+++|... +. .. .
T Consensus 162 l~----Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~--d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~ 235 (424)
T PRK06333 162 FK----GPLGAPVTACAAGVQAIGDAARLIRSGEA--DVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDR 235 (424)
T ss_pred CC----CCCccccchhHHHHHHHHHHHHHHHcCCC--CEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCC
Confidence 73 34556789999999999999999999987 999999999730 10 00 0
Q ss_pred --CCcccccceeeeeecCCCC-----ccccccccccccc-CcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHH
Q 012353 156 --ARPTGGAAAVVMLVGPDAP-----VAFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSK 227 (465)
Q Consensus 156 --~~~t~GdGA~A~Ll~~~~~-----~~~~~~~~~~~~~-~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~ 227 (465)
+..+.|+||+++||.+... ..+...+.|.... +...+.. |..++. .+.++++..+++
T Consensus 236 ~~~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~-------~~~~~~--------~~~~a~~~Al~~ 300 (424)
T PRK06333 236 DRDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTA-------GPEDGE--------GARRAMLIALRQ 300 (424)
T ss_pred CCCCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCC-------CCCCcH--------HHHHHHHHHHHH
Confidence 1235799999999987421 1111112222221 1111111 112332 122333334343
Q ss_pred hhhhhcCCCCCCCCceeeccCCchHHHHHH
Q 012353 228 YEKLEGKQFSLSNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 228 ~~~~~~~~~~~~did~~~~H~p~~km~~~~ 257 (465)
. ++.++|||++..|-.++...+.+
T Consensus 301 A------gi~p~dId~i~~hgtgt~~~D~~ 324 (424)
T PRK06333 301 A------GIPPEEVQHLNAHATSTPVGDLG 324 (424)
T ss_pred c------CCCHHHCCEEeccCCCCccchHH
Confidence 3 78999999999999988865543
No 79
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.01 E-value=2.3e-08 Score=103.44 Aligned_cols=137 Identities=17% Similarity=0.169 Sum_probs=89.3
Q ss_pred cHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc--------------------
Q 012353 91 SIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------------------- 150 (465)
Q Consensus 91 s~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------------------- 150 (465)
..+.+|+..||+. -+++.+..+|++++.||..|..+|++|.+ +.|||+++|...
T Consensus 138 ~~a~~ia~~lgl~----Gp~~~i~~acas~~~Al~~A~~~I~~G~~--d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~P 211 (392)
T PRK09185 138 SLADFLRAYLGLS----GPAYTISTACSSSAKVFASARRLLEAGLC--DAAIVGGVDSLCRLTLNGFNSLESLSPQPCRP 211 (392)
T ss_pred HHHHHHHHHhCCC----CCcccccChhHHHHHHHHHHHHHHHcCCC--CEEEEeeccccChHHHHHHHhccccCCCccCC
Confidence 4778899999973 25677888999999999999999999987 999999998531
Q ss_pred ccCCCCCcccccceeeeeecCCCCcccccccccccc-cCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhh
Q 012353 151 YAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE 229 (465)
Q Consensus 151 y~~~~~~~t~GdGA~A~Ll~~~~~~~~~~~~~~~~~-~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~ 229 (465)
|+......+.||||+++||++.....+. +.|.-. .+.+.... |..++. ...++++..+++.
T Consensus 212 fd~~~~G~~~gEGaa~vVLe~~~~~~~~--I~g~g~~~d~~~~~~-------~~~~~~--------~~~~a~~~Al~~A- 273 (392)
T PRK09185 212 FSANRDGINIGEAAAFFLLEREDDAAVA--LLGVGESSDAHHMSA-------PHPEGL--------GAILAMQQALADA- 273 (392)
T ss_pred CcCCCCccceeceEEEEEEEEcCCCcEE--EEEEEEeCCCCCCCC-------CCCCHH--------HHHHHHHHHHHHc-
Confidence 0011123568999999999987321111 222211 11111111 111221 1223344444443
Q ss_pred hhhcCCCCCCCCceeeccCCchHHHHH
Q 012353 230 KLEGKQFSLSNADYFVFHSPYNKLVQK 256 (465)
Q Consensus 230 ~~~~~~~~~~did~~~~H~p~~km~~~ 256 (465)
++.++|||++..|..+++..+.
T Consensus 274 -----gl~~~dId~v~~hgtgt~~~D~ 295 (392)
T PRK09185 274 -----GLAPADIGYINLHGTATPLNDA 295 (392)
T ss_pred -----CCCHHHccEEEeCCCCCcCCCH
Confidence 7999999999999998875553
No 80
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.01 E-value=1.5e-09 Score=112.08 Aligned_cols=105 Identities=15% Similarity=0.060 Sum_probs=87.8
Q ss_pred hhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCC--cccHHHHHHHHhcccCCCCceeEeec
Q 012353 37 IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK--SKSIKTFLMQIFEKFGNTDIEGVDST 114 (465)
Q Consensus 37 ~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~--~ps~a~~l~~~LGl~g~~~~~~~di~ 114 (465)
+|+|+..+.- ..+++..+|+++|++++|+++|++++|||.+++++. +... .+..+..+++.||+ .+..++++.
T Consensus 14 vG~g~t~~~~-~~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~-~~~~~~~~~~a~~l~~~lG~---~~~~~~~V~ 88 (392)
T PRK06065 14 IGAGLTLFRR-RLLETPQELAWEAASKALDEAGLELKDIDCVVIGSA-PDAFDGVHMKGEYLSHGSGG---IRKPVSRVY 88 (392)
T ss_pred EEecccCCcC-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecc-CCcccccccHHHHHHHHcCC---CCCCeEEEe
Confidence 5777766543 357889999999999999999999999999999863 2222 45578889999997 346788999
Q ss_pred CcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecc
Q 012353 115 NACYGGTAALFNCVNWVESSSWDGRYGLVVCTDS 148 (465)
Q Consensus 115 ~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~ 148 (465)
++|.+|..||..|...|++|.+ +.||||++|.
T Consensus 89 ~~gasG~~al~~A~~~I~sG~a--d~vLVvg~e~ 120 (392)
T PRK06065 89 VGGATGVMTAIAGWYHVASGLC--QKVLAVAEEK 120 (392)
T ss_pred cCchhHHHHHHHHHHHHhCCCC--CEEEEEEeec
Confidence 9999999999999999999988 9999999886
No 81
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=98.99 E-value=1.9e-09 Score=111.44 Aligned_cols=95 Identities=12% Similarity=0.059 Sum_probs=83.0
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHH-HHHHHhcccCCCCceeEeecCcChhHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKT-FLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~-~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~ 128 (465)
.+.+.+|+.+|++++|++++++|++||.||+++.++....+..+. .+++.+|+ .++++++++++|++|+.||..|.
T Consensus 20 ~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~---~~~p~~~V~~~Casg~~al~~A~ 96 (393)
T cd00826 20 NDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGL---QEAPAIGMNNLCGSGLRALALAM 96 (393)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCC---CCCcEEEecchhHHHHHHHHHHH
Confidence 466799999999999999999999999999999887654445554 36777774 67889999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEEeccc
Q 012353 129 NWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 129 ~~l~sg~~~~~~aLVVasD~~ 149 (465)
.+|++|.+ +.+||+++|..
T Consensus 97 ~~I~sG~~--~~vlv~g~e~~ 115 (393)
T cd00826 97 QLIAGGDA--NCILAGGFEKM 115 (393)
T ss_pred HHHHCCCC--CEEEEEeeecc
Confidence 99999977 99999999986
No 82
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=98.98 E-value=4e-08 Score=103.14 Aligned_cols=179 Identities=15% Similarity=0.106 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHHHCCCCcC-----CccEEEEEeecCCC-----------------Cc--------c-cHHHHHHHHhc
Q 012353 53 VISMSLTAVTNLLEKYKIDPK-----QIGRLEVGSETVID-----------------KS--------K-SIKTFLMQIFE 101 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~-----~Id~li~~T~s~~~-----------------~~--------p-s~a~~l~~~LG 101 (465)
...|++.|+.++|+++|+++. +...|+++|..+.. .. + ..+.+|...+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 457899999999999998542 35567777653221 01 1 24567888888
Q ss_pred ccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-------c----------cC-----------
Q 012353 102 KFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------Y----------AE----------- 153 (465)
Q Consensus 102 l~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y----------~~----------- 153 (465)
+. -.++.+.++|++++.||..|..+|++|.+ +.+||.++|... + ..
T Consensus 173 l~----Gp~~tv~~acaSg~~Al~~A~~~I~~G~~--d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~ 246 (437)
T PLN02836 173 FQ----GPNHAAVTACATGAHSIGDAFRMIQFGDA--DVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDC 246 (437)
T ss_pred CC----CceeceeChhHHHHHHHHHHHHHHHcCCC--CEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCccc
Confidence 72 35677889999999999999999999987 899999988630 0 00
Q ss_pred CCCCcccccceeeeeecCCCCc-----ccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHh
Q 012353 154 GPARPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKY 228 (465)
Q Consensus 154 ~~~~~t~GdGA~A~Ll~~~~~~-----~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~ 228 (465)
..+..+.|+||+|+||++.... .+...+.|+... .|-+.. .-|..+++ ....+++..+++.
T Consensus 247 ~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~--~d~~~~----~~p~~~~~--------~~~~a~~~Al~~A 312 (437)
T PLN02836 247 DRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMS--GDAHHI----TQPHEDGR--------GAVLAMTRALQQS 312 (437)
T ss_pred CCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeec--CCCCCC----cCCCcchH--------HHHHHHHHHHHHc
Confidence 0112457999999999975321 000012222211 111100 01212232 1222333333433
Q ss_pred hhhhcCCCCCCCCceeeccCCchHHHHHH
Q 012353 229 EKLEGKQFSLSNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 229 ~~~~~~~~~~~did~~~~H~p~~km~~~~ 257 (465)
|+.++|||++..|-.++.+.+..
T Consensus 313 ------gi~~~dId~ve~hgtgt~~~D~~ 335 (437)
T PLN02836 313 ------GLHPNQVDYVNAHATSTPLGDAV 335 (437)
T ss_pred ------CCCHhHcCEEEccCCcCcCcCHH
Confidence 78999999999999988765544
No 83
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.98 E-value=3.7e-08 Score=102.42 Aligned_cols=163 Identities=15% Similarity=0.131 Sum_probs=105.4
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc--CCC---h-hhhh-hhhcCeEEe-cC--------CC-----CCCHHHHHHHHH
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD--GAS---K-GKYT-IGLGQECMA-FC--------SE-----VEDVISMSLTAV 61 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~---~-~k~~-~Gig~r~~a-v~--------~~-----~Ed~~~la~~Aa 61 (465)
+.|-|.++|+..|--. +.+++.+.. |.+ + ..|. .+...+.-. ++ ++ -.....|++.|+
T Consensus 2 ~~v~ItG~g~vsp~G~-~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~Aa 80 (406)
T PRK08439 2 KRVVVTGIGMINSLGL-NKESSFKAICNGECGIKKITLFDASDFPVQIAGEITDFDPTEVMDPKEVKKADRFIQLGLKAA 80 (406)
T ss_pred CCEEEEeeEEECCCcC-CHHHHHHHHHcCCCceEeCCCccccCCCCceeEEcCCcChhhcCCHHHHhhcCHHHHHHHHHH
Confidence 5799999999999875 555554432 221 1 1110 000000000 10 00 012467899999
Q ss_pred HHHHHHCCCCcCCccE----EEEEeecCCC-------------------------Ccc-cHHHHHHHHhcccCCCCceeE
Q 012353 62 TNLLEKYKIDPKQIGR----LEVGSETVID-------------------------KSK-SIKTFLMQIFEKFGNTDIEGV 111 (465)
Q Consensus 62 ~~aL~~agi~~~~Id~----li~~T~s~~~-------------------------~~p-s~a~~l~~~LGl~g~~~~~~~ 111 (465)
+++|+++|+++++++. +++++..+.. ..+ ..+.+|...+|+. -+.+
T Consensus 81 ~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~----Gp~~ 156 (406)
T PRK08439 81 REAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLK----GPNL 156 (406)
T ss_pred HHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCCC----CCcc
Confidence 9999999998877653 4555432110 011 4677899999983 2456
Q ss_pred eecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc-c------c------c---C---CC--------CCcccccce
Q 012353 112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------Y------A---E---GP--------ARPTGGAAA 164 (465)
Q Consensus 112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~------y------~---~---~~--------~~~t~GdGA 164 (465)
.+..+|++++.||..|..+|++|.+ +.+||+++|.. . + . . .. ...+.|+||
T Consensus 157 ~~~~acas~~~Al~~A~~~i~~G~~--d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGa 234 (406)
T PRK08439 157 SSVTACAAGTHAIIEAVKTIMLGGA--DKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRDGFVMGEGA 234 (406)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCC--CEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCCCcEEeeCce
Confidence 6779999999999999999999987 99999999963 0 1 0 0 00 123579999
Q ss_pred eeeeecCC
Q 012353 165 VVMLVGPD 172 (465)
Q Consensus 165 ~A~Ll~~~ 172 (465)
+++||++.
T Consensus 235 ~~lvLe~~ 242 (406)
T PRK08439 235 GALVLEEY 242 (406)
T ss_pred EEEEEccH
Confidence 99999975
No 84
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=98.97 E-value=5e-08 Score=101.94 Aligned_cols=177 Identities=15% Similarity=0.222 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHHHCCCC-cCCccE----EEEEeecCCCC-----------------cc---------cHHHHHHHHhc
Q 012353 53 VISMSLTAVTNLLEKYKID-PKQIGR----LEVGSETVIDK-----------------SK---------SIKTFLMQIFE 101 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~-~~~Id~----li~~T~s~~~~-----------------~p---------s~a~~l~~~LG 101 (465)
...|++.|++++|+++|++ +++++. +++++..+... .| ..+.+|...+|
T Consensus 77 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 156 (421)
T PTZ00050 77 ATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHK 156 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhC
Confidence 4789999999999999998 665543 44555432210 01 24556777888
Q ss_pred ccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-----------------ccCC---CC-----
Q 012353 102 KFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-----------------YAEG---PA----- 156 (465)
Q Consensus 102 l~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-----------------y~~~---~~----- 156 (465)
+. -+++.+..+|++++.||..|..+|++|.+ +.+||+++|... +... ..
T Consensus 157 l~----Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~--d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~ 230 (421)
T PTZ00050 157 LK----GPSGSAVTACATGAHCIGEAFRWIKYGEA--DIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDK 230 (421)
T ss_pred CC----CcccccccHhHHHHHHHHHHHHHHHcCCC--CEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcC
Confidence 73 24567789999999999999999999987 999999998620 0000 01
Q ss_pred ---CcccccceeeeeecCCCCc-----cccccccccccc-CcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHH
Q 012353 157 ---RPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSK 227 (465)
Q Consensus 157 ---~~t~GdGA~A~Ll~~~~~~-----~~~~~~~~~~~~-~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~ 227 (465)
....|+||+|+||.+.... .+...+.|.... +...+..| ..++. ....+++..+++
T Consensus 231 ~~~G~~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p-------~~~~~--------~~~~ai~~Al~~ 295 (421)
T PTZ00050 231 DRAGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAP-------HPDGR--------GARRCMENALKD 295 (421)
T ss_pred CCCCEeeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCC-------CCChH--------HHHHHHHHHHHh
Confidence 1346999999999875321 110012222211 11111112 12232 122333444444
Q ss_pred -hhhhhcCCCCCCCCceeeccCCchHHHHH
Q 012353 228 -YEKLEGKQFSLSNADYFVFHSPYNKLVQK 256 (465)
Q Consensus 228 -~~~~~~~~~~~~did~~~~H~p~~km~~~ 256 (465)
. |+.++|||++..|..++.+.+.
T Consensus 296 ~A------gi~~~dId~ie~hgtgt~~~D~ 319 (421)
T PTZ00050 296 GA------NININDVDYVNAHATSTPIGDK 319 (421)
T ss_pred cc------CCChhhCCEEECCCccCCCCCH
Confidence 3 7899999999999988866543
No 85
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=98.96 E-value=2.9e-09 Score=110.28 Aligned_cols=97 Identities=12% Similarity=0.121 Sum_probs=80.3
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccC-CCCceeEeecCcChhHHHHHHHH
Q 012353 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG-NTDIEGVDSTNACYGGTAALFNC 127 (465)
Q Consensus 49 ~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g-~~~~~~~di~~aC~gg~~AL~~A 127 (465)
.+.+..+|+.+|++++|+++|++|++||.|++|+..+.... .+...+..|++ | +.++++++++++|++|..|+..|
T Consensus 27 ~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~--~~~~~~~~l~a-g~~~~~p~~~V~~aCaSG~~Av~~A 103 (397)
T PRK06954 27 ASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQG--QAPARQAALGA-GLPLSVGCTTVNKMCGSGMRAAMFA 103 (397)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccc--hHHHHHHHHcC-CCCCCccEeeccccchHHHHHHHHH
Confidence 36778999999999999999999999999999987755432 22333344543 2 33589999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEEecccc
Q 012353 128 VNWVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~~ 150 (465)
..+|++|.+ +.+||+++|..+
T Consensus 104 ~~~I~sG~~--d~vLv~G~E~ms 124 (397)
T PRK06954 104 HDMLVAGSV--DVIVAGGMESMT 124 (397)
T ss_pred HHHHHCCCC--CEEEEEeeeccC
Confidence 999999977 999999999874
No 86
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=98.94 E-value=5e-08 Score=99.49 Aligned_cols=92 Identities=13% Similarity=0.165 Sum_probs=76.5
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~ 129 (465)
+..+.+|+..|++.+++ |++ ++||.|++|+..+.. ...+..+...+|+ ...++++.+.++|++|+.|+..|..
T Consensus 22 ~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~~--~~~~r~~~~~~Gl--~~~~p~~tV~~~CaSG~~Ai~~a~~ 94 (361)
T PRK06690 22 DYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGPG--GNVARLSALEAGL--GLHIPGVTIDRQCGAGLEAIRTACH 94 (361)
T ss_pred CCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCCc--chHHHHHHHHcCC--CCCCCceehhhhhhHHHHHHHHHHH
Confidence 45689999999999865 896 899999999776542 3344457778887 4478999999999999999999999
Q ss_pred HHHcCCCCCCEEEEEEecccc
Q 012353 130 WVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVasD~~~ 150 (465)
+|++|.. +.+||++.|..+
T Consensus 95 ~I~sG~~--d~~l~gG~E~ms 113 (361)
T PRK06690 95 FIQGGAG--KCYIAGGVESTS 113 (361)
T ss_pred HHHCCCC--CEEEEecccccc
Confidence 9999977 999999999763
No 87
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=98.93 E-value=5.2e-09 Score=102.42 Aligned_cols=98 Identities=18% Similarity=0.141 Sum_probs=84.8
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHH
Q 012353 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (465)
Q Consensus 49 ~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~ 128 (465)
.+.+..+|+..|++.+|++++++|++||.|++|+..+....+.++..+.-..|+ +..++++.|+++|.+|..||.+|.
T Consensus 22 ~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl--~~~vp~~~V~~~CaSG~~Av~~a~ 99 (264)
T PF00108_consen 22 ADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGL--PESVPATTVNRACASGLQAVHLAA 99 (264)
T ss_dssp TTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS---TTSEEEEEE-GGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhccc--ccccceeeehhhhhHHHHHHHHhh
Confidence 467899999999999999999999999999999988866666777777778888 678899999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEEecccc
Q 012353 129 NWVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 129 ~~l~sg~~~~~~aLVVasD~~~ 150 (465)
..|++|.. +.+|+++.|.++
T Consensus 100 ~~I~sG~~--dvvlagGvE~mS 119 (264)
T PF00108_consen 100 MAIASGEA--DVVLAGGVESMS 119 (264)
T ss_dssp HHHHTTS---SEEEEEEEEETT
T ss_pred hhhcCCCc--cEEEEecccccc
Confidence 99999977 999999999984
No 88
>PRK06158 thiolase; Provisional
Probab=98.92 E-value=3.7e-09 Score=109.02 Aligned_cols=99 Identities=10% Similarity=-0.020 Sum_probs=82.9
Q ss_pred hhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCc
Q 012353 37 IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNA 116 (465)
Q Consensus 37 ~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~a 116 (465)
+|+|+..+.- .++++..+|+.+|++++|+++|+++++||.|++++.. +..|+ ..|++.||+ +...++++..+
T Consensus 13 vG~g~t~~~~-~~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~--~~~~~--~~la~~lGl---~~~~~~~~~~g 84 (384)
T PRK06158 13 VGAATAGLGE-APGLSAMELLAQAAHRALADAGLTMADVDGLFTASPD--DALWG--LSVAEYLGI---RPRFVDGTMIG 84 (384)
T ss_pred EEeeecccee-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCC--CCCcH--HHHHHHcCC---CCeeeccccCc
Confidence 5888776542 4578899999999999999999999999999998743 22333 579999997 45677888899
Q ss_pred ChhHHHHHHHHHHHHHcCCCCCCEEEEEE
Q 012353 117 CYGGTAALFNCVNWVESSSWDGRYGLVVC 145 (465)
Q Consensus 117 C~gg~~AL~~A~~~l~sg~~~~~~aLVVa 145 (465)
|.++..+|..|..+|++|.+ +.|||+.
T Consensus 85 ~~s~~~al~~A~~~I~sG~~--d~vLV~~ 111 (384)
T PRK06158 85 GSSFLAHLLPAALALEAGLC--DVALICY 111 (384)
T ss_pred cHHHHHHHHHHHHHHHcCCC--CEEEEee
Confidence 99999999999999999987 9999983
No 89
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.91 E-value=1.3e-07 Score=98.11 Aligned_cols=163 Identities=14% Similarity=0.133 Sum_probs=103.6
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc--CC---Ch-hhh-hhhhcCeEEecCC-------------CCCCHHHHHHHHHH
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD--GA---SK-GKY-TIGLGQECMAFCS-------------EVEDVISMSLTAVT 62 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~---~~-~k~-~~Gig~r~~av~~-------------~~Ed~~~la~~Aa~ 62 (465)
+.|-|.+||+..|--. +.+++.+.. |. .+ ..| ..+...+.....+ .-.....|++.|++
T Consensus 2 ~rVvITG~G~vsp~G~-~~~~~w~~l~~G~sgi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~a~~aa~ 80 (406)
T PRK07967 2 RRVVITGLGIVSSIGN-NQQEVLASLREGRSGITFSPEFAEMGMRSQVWGNVKLDPTGLIDRKVMRFMGDASAYAYLAME 80 (406)
T ss_pred CcEEEEcceEECCCCC-CHHHHHHHHHcCCCceeECCcccccCCCCceEEEcCCChhhcCCHHHhhcCCHHHHHHHHHHH
Confidence 6799999999999874 666654443 22 11 111 1111111111100 01124568999999
Q ss_pred HHHHHCCCCcCCcc----EEEEEeecCCC------------------C--------cc-cHHHHHHHHhcccCCCCceeE
Q 012353 63 NLLEKYKIDPKQIG----RLEVGSETVID------------------K--------SK-SIKTFLMQIFEKFGNTDIEGV 111 (465)
Q Consensus 63 ~aL~~agi~~~~Id----~li~~T~s~~~------------------~--------~p-s~a~~l~~~LGl~g~~~~~~~ 111 (465)
++|+++|+++.+++ .|+++|..+.. . .+ ..+.+|...+|+.| +++
T Consensus 81 ~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~G----p~~ 156 (406)
T PRK07967 81 QAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKG----VNY 156 (406)
T ss_pred HHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCCCC----Ccc
Confidence 99999998754322 24455532211 0 01 26677889999732 456
Q ss_pred eecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc------cc----------CC---CCC--------cccccce
Q 012353 112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV------YA----------EG---PAR--------PTGGAAA 164 (465)
Q Consensus 112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~------y~----------~~---~~~--------~t~GdGA 164 (465)
-+..+|++++.||..|..+|++|.. +.+||.++|... |. .. ..+ ...|+||
T Consensus 157 tvs~aCas~~~Ai~~A~~~ir~G~~--d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G~v~gEGa 234 (406)
T PRK07967 157 SISSACATSAHCIGNAVEQIQLGKQ--DIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVIAGGG 234 (406)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCC--CEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCCceeeeceE
Confidence 6789999999999999999999987 999999998631 10 00 112 2469999
Q ss_pred eeeeecCC
Q 012353 165 VVMLVGPD 172 (465)
Q Consensus 165 ~A~Ll~~~ 172 (465)
+++||++.
T Consensus 235 a~lvLe~~ 242 (406)
T PRK07967 235 GVVVVEEL 242 (406)
T ss_pred EEEEEeeH
Confidence 99999874
No 90
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=98.91 E-value=8e-09 Score=106.81 Aligned_cols=107 Identities=17% Similarity=0.153 Sum_probs=82.9
Q ss_pred hhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCC--cccHHHHHHHHhcccCCCCceeEeec
Q 012353 37 IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK--SKSIKTFLMQIFEKFGNTDIEGVDST 114 (465)
Q Consensus 37 ~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~--~ps~a~~l~~~LGl~g~~~~~~~di~ 114 (465)
+|.++..+.- ..+++..+|+++|++++|+++|+++++||.|++++..+... ....+..+...+|+ ..+.++++.
T Consensus 7 vg~g~tpfgr-~~~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl---~~~p~~~v~ 82 (389)
T PRK07516 7 VGWAHTPFGK-LDAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPAL---RFKPATRVE 82 (389)
T ss_pred EeCCcceeee-cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCC---CCCceeeec
Confidence 3555554432 35788999999999999999999999999999987643211 11122233344554 567889999
Q ss_pred CcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc
Q 012353 115 NACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 115 ~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~ 149 (465)
++|++++.||..|..+|++|.+ +.|||+++|..
T Consensus 83 ~~CaSg~~Al~~A~~~I~sG~~--d~vLvvg~e~~ 115 (389)
T PRK07516 83 NACATGSAAVYAALDAIEAGRA--RIVLVVGAEKM 115 (389)
T ss_pred cccHHHHHHHHHHHHHHHCCCC--CEEEEEEehhh
Confidence 9999999999999999999987 99999999975
No 91
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=98.89 E-value=6.7e-09 Score=107.84 Aligned_cols=94 Identities=16% Similarity=0.141 Sum_probs=76.6
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCc-----ccHHHHHHHHhcccCCCCceeEeecCcChhHHHH
Q 012353 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKS-----KSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAA 123 (465)
Q Consensus 49 ~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~-----ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~A 123 (465)
.+++..+|+++|++++|+++|+++++||.||+++++++... +..... ..+++ .+++++++.++|.+++.|
T Consensus 22 ~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~--~~~~~---~g~~~~~v~~~Casg~~a 96 (403)
T PRK06289 22 EGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPAT--VHPAL---WGVPASRHEAACASGSVA 96 (403)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHH--HhhcC---CCCceeecccccHHHHHH
Confidence 57889999999999999999999999999999988765322 111111 22243 245789999999999999
Q ss_pred HHHHHHHHHcCCCCCCEEEEEEeccc
Q 012353 124 LFNCVNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 124 L~~A~~~l~sg~~~~~~aLVVasD~~ 149 (465)
|..|..+|++|.+ ++|||+++|..
T Consensus 97 l~~Aa~~I~sG~~--~~VLvvg~e~~ 120 (403)
T PRK06289 97 TLAAMADLRAGRY--DVALVVGVELM 120 (403)
T ss_pred HHHHHHHHHcCCC--CEEEEEEEEec
Confidence 9999999999987 99999998874
No 92
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.89 E-value=6.6e-08 Score=100.30 Aligned_cols=175 Identities=13% Similarity=0.062 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCcc----EEEEEeecCCC-----------------Ccc---------cHHHHHHHHhcc
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQIG----RLEVGSETVID-----------------KSK---------SIKTFLMQIFEK 102 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~Id----~li~~T~s~~~-----------------~~p---------s~a~~l~~~LGl 102 (465)
..-|++.|++++|+++|+++++++ .|+++|..+.. ..| ..+.+|...+|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 356889999999999999876543 35666654321 001 245678888987
Q ss_pred cCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-------c------c--CC---CC--------
Q 012353 103 FGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------Y------A--EG---PA-------- 156 (465)
Q Consensus 103 ~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y------~--~~---~~-------- 156 (465)
.| +++-+..+|++++.||..|..+|++| . +.+||.++|... + . .. ..
T Consensus 151 ~G----p~~ti~~acaS~~~Al~~A~~~i~~G--~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~~ 223 (399)
T cd00832 151 RG----PSGVVVAEQAGGLDALAQARRLVRRG--T-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAA 223 (399)
T ss_pred CC----CcccccchhHHHHHHHHHHHHHHHcC--C-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCCC
Confidence 32 45567899999999999999999999 6 799999998731 1 0 00 11
Q ss_pred CcccccceeeeeecCCCCc-----ccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhh
Q 012353 157 RPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL 231 (465)
Q Consensus 157 ~~t~GdGA~A~Ll~~~~~~-----~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~ 231 (465)
..+.|+||+++||++.... .+...+.|..+. .|-.. . +. . ...+..+++..++..
T Consensus 224 G~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~--~d~~~---~---~~-~--------~~~~~~a~~~al~~a--- 283 (399)
T cd00832 224 GYVPGEGGAILVLEDAAAARERGARVYGEIAGYAAT--FDPPP---G---SG-R--------PPGLARAIRLALADA--- 283 (399)
T ss_pred CEeeeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEc--CCCCC---C---CC-C--------HHHHHHHHHHHHHHc---
Confidence 1356999999999875321 111112222221 11000 0 00 1 122334444444443
Q ss_pred hcCCCCCCCCceeeccCCchHHHHHH
Q 012353 232 EGKQFSLSNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 232 ~~~~~~~~did~~~~H~p~~km~~~~ 257 (465)
+++++||||+..|...++..+..
T Consensus 284 ---g~~~~~i~~v~~hgtgt~~~D~~ 306 (399)
T cd00832 284 ---GLTPEDVDVVFADAAGVPELDRA 306 (399)
T ss_pred ---CCCHHHccEEEeccCcCCCCCHH
Confidence 79999999999999887765544
No 93
>PLN02287 3-ketoacyl-CoA thiolase
Probab=98.86 E-value=1.4e-08 Score=106.46 Aligned_cols=97 Identities=11% Similarity=0.153 Sum_probs=83.3
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCccc-HHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHH
Q 012353 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKS-IKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (465)
Q Consensus 49 ~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps-~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A 127 (465)
.+.+..+|+.+|++++|+++|++++|||.|++++.++....+. .+..+...+|+ ...+++++++.+|.+|..|+..|
T Consensus 67 ~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl--~~~~pa~~V~~~CaSG~~Ai~~A 144 (452)
T PLN02287 67 KDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGF--PETVPVRTVNRQCSSGLQAVADV 144 (452)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCC--CCCcceEEEeccCchHHHHHHHH
Confidence 3678999999999999999999999999999998876554444 33456677787 44588999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEEeccc
Q 012353 128 VNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~ 149 (465)
...|++|.+ +.|||++.|..
T Consensus 145 a~~I~sG~~--dvvLv~GvE~m 164 (452)
T PLN02287 145 AAAIKAGFY--DIGIGAGVESM 164 (452)
T ss_pred HHHHHcCCC--CeEEEEeEEec
Confidence 999999977 99999999876
No 94
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=98.86 E-value=2.2e-07 Score=99.42 Aligned_cols=227 Identities=16% Similarity=0.184 Sum_probs=133.8
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc--C---CCh-hhhh-hhh-----cC-eEEe---cCCC----CCC-HHHHHHHHH
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD--G---ASK-GKYT-IGL-----GQ-ECMA---FCSE----VED-VISMSLTAV 61 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g---~~~-~k~~-~Gi-----g~-r~~a---v~~~----~Ed-~~~la~~Aa 61 (465)
+.|.|.++|+.+|--. +.+++.+.. | +.+ .++. ..+ |+ +.+. +.++ .-| ..-|++.|+
T Consensus 129 ~rVvITG~G~vtp~G~-~~~~~w~~L~~G~s~i~~~~~f~~~~~~~~~ag~i~~f~~~~~l~~k~~r~md~~~~~al~Aa 207 (540)
T PLN02787 129 RRVVVTGMGVVSPLGH-DPDVFYNNLLEGVSGISEIERFDCSQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 207 (540)
T ss_pred CCEEEEeeEEECCCCC-CHHHHHHHHHcCCCcccccCccchhhCCccccccccccChhhcCCHHHHHhCCHHHHHHHHHH
Confidence 4699999999999874 666655443 2 211 1110 000 10 0000 0000 112 346889999
Q ss_pred HHHHHHCCCCcCC---cc----EEEEEeecCCC----------------Ccc---------cHHHHHHHHhcccCCCCce
Q 012353 62 TNLLEKYKIDPKQ---IG----RLEVGSETVID----------------KSK---------SIKTFLMQIFEKFGNTDIE 109 (465)
Q Consensus 62 ~~aL~~agi~~~~---Id----~li~~T~s~~~----------------~~p---------s~a~~l~~~LGl~g~~~~~ 109 (465)
+++|+++|++++. ++ .|+++|..+.. ..| ..+.+|...+|+. -+
T Consensus 208 ~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl~----Gp 283 (540)
T PLN02787 208 KKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWM----GP 283 (540)
T ss_pred HHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCCC----CC
Confidence 9999999997642 21 45667654321 001 2356788888873 34
Q ss_pred eEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc--c-----c------c---CC---CCC--------ccccc
Q 012353 110 GVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA--V-----Y------A---EG---PAR--------PTGGA 162 (465)
Q Consensus 110 ~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~--~-----y------~---~~---~~~--------~t~Gd 162 (465)
.+.+..||++++.||..|..+|++|.. +.+||.++|.. . + . +. ..+ .+.|+
T Consensus 284 ~~tistACASs~~Ai~~A~~~Ir~G~a--D~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~rdGfv~GE 361 (540)
T PLN02787 284 NYSISTACATSNFCILNAANHIIRGEA--DVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNRDGFVMGE 361 (540)
T ss_pred ccccccccccHHHHHHHHHHHHHcCCC--CEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCCCCccccc
Confidence 567789999999999999999999987 99999999963 1 1 0 00 112 34799
Q ss_pred ceeeeeecCCCC-----cccccccccccc-cCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 012353 163 AAVVMLVGPDAP-----VAFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQF 236 (465)
Q Consensus 163 GA~A~Ll~~~~~-----~~~~~~~~~~~~-~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~ 236 (465)
||+++||++... ..+...+.|... .+.+....| ..+|+- +..+++..+++. |+
T Consensus 362 GAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p-------~p~g~g--------~~~am~~AL~~A------Gl 420 (540)
T PLN02787 362 GAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEP-------HPEGAG--------VILCIEKALAQS------GV 420 (540)
T ss_pred ceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCC-------CcCHHH--------HHHHHHHHHHHc------CC
Confidence 999999997431 111111222221 222222222 224432 222334444443 79
Q ss_pred CCCCCceeeccCCchHHHHHH
Q 012353 237 SLSNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 237 ~~~did~~~~H~p~~km~~~~ 257 (465)
+++||||+..|...++..+.+
T Consensus 421 ~p~dIdyInaHGTGT~~gD~~ 441 (540)
T PLN02787 421 SKEDVNYINAHATSTKAGDLK 441 (540)
T ss_pred CHHHCcEEEccCccCCCCCHH
Confidence 999999999999888765543
No 95
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=98.83 E-value=1.7e-08 Score=104.30 Aligned_cols=97 Identities=8% Similarity=0.017 Sum_probs=84.4
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCC-cccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~ 128 (465)
+.+..+|+.+|++++|+++|+.+++||.+++++..+... .+.++..++..+|+ +..++++.+.++|.+|..|+..|.
T Consensus 24 ~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl--~~~~p~~~V~~aCaSG~~Al~~A~ 101 (391)
T PRK07661 24 TVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGL--PYTVPAITINRYCSSGLQSIAYGA 101 (391)
T ss_pred CCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCC--CCCcceeehhhhhhHHHHHHHHHH
Confidence 457899999999999999988889999999997765433 36677779999997 335899999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEEecccc
Q 012353 129 NWVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 129 ~~l~sg~~~~~~aLVVasD~~~ 150 (465)
..|++|.+ +.+||+++|..+
T Consensus 102 ~~I~sG~~--d~vLv~G~E~ms 121 (391)
T PRK07661 102 ERIMLGHS--EAVIAGGAESMS 121 (391)
T ss_pred HHHHcCCC--CEEEEEEEeecc
Confidence 99999977 999999999764
No 96
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.82 E-value=3.2e-07 Score=93.01 Aligned_cols=177 Identities=12% Similarity=0.068 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHHHCCC--CcCCccEEEEEeecCCC-----------------Ccc---------cHHHHHHHHhcccC
Q 012353 53 VISMSLTAVTNLLEKYKI--DPKQIGRLEVGSETVID-----------------KSK---------SIKTFLMQIFEKFG 104 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi--~~~~Id~li~~T~s~~~-----------------~~p---------s~a~~l~~~LGl~g 104 (465)
...|+..|++++|+++|+ ++++++.++ ||..+.. ..| ..+.+|...+|+.|
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~~-G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~G 82 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATII-GAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKG 82 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEEE-ecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCC
Confidence 456899999999999996 566776554 5543221 011 35677888888732
Q ss_pred CCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-------c----------cCCC---CC-------
Q 012353 105 NTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------Y----------AEGP---AR------- 157 (465)
Q Consensus 105 ~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y----------~~~~---~~------- 157 (465)
+.+-+..+|++++.||..|..+|++|.. +.+||.++|... + ...+ .+
T Consensus 83 ----p~~ti~~aCaSg~~Al~~A~~~I~~G~~--d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~ 156 (342)
T PRK14691 83 ----PIGAPVTACAAGVQAIGDAVRMIRNNEA--DVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARD 156 (342)
T ss_pred ----CccccccHhHHHHHHHHHHHHHHHcCCC--CEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCC
Confidence 4566789999999999999999999987 999999998631 1 0001 12
Q ss_pred -cccccceeeeeecCCCCc-----cccccccccccc-CcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhh
Q 012353 158 -PTGGAAAVVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEK 230 (465)
Q Consensus 158 -~t~GdGA~A~Ll~~~~~~-----~~~~~~~~~~~~-~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~ 230 (465)
.+.||||+++||.+.... .+...+.+.... +......| ..++ .....+++..+++.
T Consensus 157 G~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p-------~p~~--------~~~~~ai~~AL~~A-- 219 (342)
T PRK14691 157 GFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSG-------AEDG--------DGAYRAMKIALRQA-- 219 (342)
T ss_pred CccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCC-------CCCH--------HHHHHHHHHHHHHc--
Confidence 347999999999875321 010112222111 11111111 1122 12223444444444
Q ss_pred hhcCCCCCCCCceeeccCCchHHHHHH
Q 012353 231 LEGKQFSLSNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 231 ~~~~~~~~~did~~~~H~p~~km~~~~ 257 (465)
+++++|||++..|-.+++..+.+
T Consensus 220 ----gl~p~dIdyIeaHgtgT~~~D~~ 242 (342)
T PRK14691 220 ----GITPEQVQHLNAHATSTPVGDLG 242 (342)
T ss_pred ----CCCHHHCCEEEecCCCCcCCCHH
Confidence 78999999999999998876554
No 97
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=98.78 E-value=3.3e-08 Score=102.63 Aligned_cols=96 Identities=10% Similarity=0.110 Sum_probs=82.3
Q ss_pred CCCHHHHHHHHHHHHHHHC-CCCcCCccEEEEEeecCC-CCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKY-KIDPKQIGRLEVGSETVI-DKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~a-gi~~~~Id~li~~T~s~~-~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A 127 (465)
+.+..+|+.+|++++|+++ |+++++||.|++++..+. ...+..+..+...+|+ ..++++.+.++|++|..|+..|
T Consensus 24 ~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl---~~~p~~~v~~~caSG~~av~~A 100 (406)
T PRK07851 24 DMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGY---DFLPGTTVNRYCSSSLQTTRMA 100 (406)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCC---CCCCeeeeeccchhHHHHHHHH
Confidence 5678999999999999997 999999999999864432 2234566789999997 3478889999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEEecccc
Q 012353 128 VNWVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~~ 150 (465)
...|++|.+ +.|||+++|..+
T Consensus 101 a~~I~sG~~--d~vLv~G~e~~s 121 (406)
T PRK07851 101 FHAIKAGEG--DVFISAGVETVS 121 (406)
T ss_pred HHHHHCCCC--CEEEEeeEEecc
Confidence 999999987 999999999863
No 98
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.75 E-value=4.7e-08 Score=101.30 Aligned_cols=107 Identities=20% Similarity=0.174 Sum_probs=85.1
Q ss_pred hhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCc
Q 012353 37 IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNA 116 (465)
Q Consensus 37 ~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~a 116 (465)
+|.+...+.- ..+.+..+|+.+|++++|+++|+++++||.|++++.............+.+.+|+ . ..+++.+.++
T Consensus 12 vG~g~tp~~~-~~~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl--~-~~~~~~v~~~ 87 (398)
T PRK06157 12 LGMGCTKFGE-RWDAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRL--P-NIPVTRVENF 87 (398)
T ss_pred EEeccccccc-cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCC--C-CCCEEEEecc
Confidence 3555444321 2356789999999999999999999999999998765332222334678889997 3 4778889999
Q ss_pred ChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc
Q 012353 117 CYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 117 C~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~ 149 (465)
|.+++.||..|...|++|.+ +.|||+++|..
T Consensus 88 c~sg~~ai~~A~~~I~sG~~--d~vlv~G~e~~ 118 (398)
T PRK06157 88 CATGSEAFRGAVYAVASGAY--DIALALGVEKL 118 (398)
T ss_pred cHHHHHHHHHHHHHHHCCCC--CEEEEEEEeec
Confidence 99999999999999999977 99999999975
No 99
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.74 E-value=4.1e-07 Score=94.09 Aligned_cols=219 Identities=12% Similarity=0.043 Sum_probs=131.6
Q ss_pred CceeEEeEEEEecCCceechHHHHHhc--CCCh-----hh---hhhh-hcC---eEEecCCC----C-CCHHHHHHHHHH
Q 012353 2 AKNVGILAMDIYFPPTCVQQEALEAHD--GASK-----GK---YTIG-LGQ---ECMAFCSE----V-EDVISMSLTAVT 62 (465)
Q Consensus 2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~-----~k---~~~G-ig~---r~~av~~~----~-Ed~~~la~~Aa~ 62 (465)
+++|-|.+||+..|--. +.+++.+.. |.+. .. +..+ +++ +.. ++.. . .....|++.|++
T Consensus 5 ~~rVvITGiG~vsp~G~-~~e~~w~aL~~G~sg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~r~~~r~~~~a~~Aa~ 82 (398)
T PRK06519 5 PNDVVITGIGLVSSLGE-GLDAHWNALSAGRPQPNVDTETFAPYPVHPLPEIDWSQQ-IPKRGDQRQMETWQRLGTYAAG 82 (398)
T ss_pred CCCEEEEcceEECCCCC-CHHHHHHHHHcCCCCCCCCcccccCcCcccccccChhhc-CCchhhhhccCHHHHHHHHHHH
Confidence 35799999999998765 555554443 3321 00 0000 010 000 1110 1 125668999999
Q ss_pred HHHHHCCCCcC-----CccEEEEEeecCCC-----------------------------Ccc---------cHHHHHHHH
Q 012353 63 NLLEKYKIDPK-----QIGRLEVGSETVID-----------------------------KSK---------SIKTFLMQI 99 (465)
Q Consensus 63 ~aL~~agi~~~-----~Id~li~~T~s~~~-----------------------------~~p---------s~a~~l~~~ 99 (465)
++|+++|+++. +++ |+++|..+.. ..| ..+..|...
T Consensus 83 ~Al~dAGl~~~~~~~~r~G-vivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~ 161 (398)
T PRK06519 83 LALDDAGIKGNEELLSTMD-MIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSNLLAGNISIV 161 (398)
T ss_pred HHHHHcCCCCCCCCccceE-EEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhhHHHHHHHHH
Confidence 99999998543 333 4555544320 011 256678888
Q ss_pred hcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc-c------c------cCC---C--------
Q 012353 100 FEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------Y------AEG---P-------- 155 (465)
Q Consensus 100 LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~------y------~~~---~-------- 155 (465)
+|+.| +.+.+..+|++++.||..|..+|++|.. +.+||.++|.. . | ... +
T Consensus 162 ~gl~G----p~~ti~~acaSg~~Ai~~A~~~I~~G~~--d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~~d~~~~~ 235 (398)
T PRK06519 162 HKVTG----SSRTFMGEESAGVSAIEIAFARIASGQS--DHALVGGAYNAERPDMLLLYELGGLLLKGGWAPVWSRGGED 235 (398)
T ss_pred hCCCC----ccccccCCccHHHHHHHHHHHHHHcCCC--CEEEEeeeccccCHHHHHHHHHcCccCCCCCCchhccCccC
Confidence 99733 4567889999999999999999999977 99999999863 1 1 000 0
Q ss_pred -CCcccccceeeeeecCCCCc-----ccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhh
Q 012353 156 -ARPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE 229 (465)
Q Consensus 156 -~~~t~GdGA~A~Ll~~~~~~-----~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~ 229 (465)
.-...|.||+++||++.+.. .+...+.|..+ |.. +. .+ ..+.++++..++..
T Consensus 236 r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~----d~~--------~~-~~--------~~~~~am~~AL~~A- 293 (398)
T PRK06519 236 GGGFILGSGGAFLVLESREHAEARGARPYARISGVES----DRA--------RR-AP--------GDLEASLERLLKPA- 293 (398)
T ss_pred CCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEee----cCC--------CC-Ch--------HHHHHHHHHHHHHC-
Confidence 11346999999999985421 11111223211 111 11 11 12334555555544
Q ss_pred hhhcCCCCCCCCceeeccCCchHHHHHH
Q 012353 230 KLEGKQFSLSNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 230 ~~~~~~~~~~did~~~~H~p~~km~~~~ 257 (465)
++ ++||||+..|...+++.+.+
T Consensus 294 -----gl-~~~IdyI~ahgtgT~~~D~~ 315 (398)
T PRK06519 294 -----GG-LAAPTAVISGATGAHPATAE 315 (398)
T ss_pred -----CC-cccCCEEEeCCCCCCCccHH
Confidence 78 79999999999888766554
No 100
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.74 E-value=7.1e-07 Score=93.11 Aligned_cols=176 Identities=11% Similarity=0.134 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHHCCC---CcCCccEEEEEeecCCC-----------------Cc--------c-cHHHHHHHHhcccC
Q 012353 54 ISMSLTAVTNLLEKYKI---DPKQIGRLEVGSETVID-----------------KS--------K-SIKTFLMQIFEKFG 104 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi---~~~~Id~li~~T~s~~~-----------------~~--------p-s~a~~l~~~LGl~g 104 (465)
.-|++.|++++|+++|+ ++++++. +++|..+.. .. + ..+.+|...+|+.
T Consensus 84 ~~~~l~aa~~AledAg~~~~~~~r~Gv-~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~- 161 (418)
T PRK07910 84 QRMSTVLGRRVWENAGSPEVDTNRLMV-SIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAK- 161 (418)
T ss_pred HHHHHHHHHHHHHHcCCCCCCcccEEE-EEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCC-
Confidence 45888999999999996 4555654 455543211 00 1 2455667777762
Q ss_pred CCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-------c-------c------CCCCC-------
Q 012353 105 NTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------Y-------A------EGPAR------- 157 (465)
Q Consensus 105 ~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y-------~------~~~~~------- 157 (465)
-..+.+..+|++++.||..|..+|++|.. +.+||.++|... | . ....+
T Consensus 162 ---G~~~ti~taCaS~~~Al~~A~~~I~~G~~--d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~~ 236 (418)
T PRK07910 162 ---AGVITPVSACASGSEAIAQAWRQIVLGEA--DIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRD 236 (418)
T ss_pred ---CCcccccchhHHHHHHHHHHHHHHHcCCC--CEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCCC
Confidence 23456789999999999999999999977 999999999731 1 0 00112
Q ss_pred -cccccceeeeeecCCCCc-----cccccccccccc-CcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhh
Q 012353 158 -PTGGAAAVVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEK 230 (465)
Q Consensus 158 -~t~GdGA~A~Ll~~~~~~-----~~~~~~~~~~~~-~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~ 230 (465)
...|+||+++||.+.... .+...+.|+... +.+.+..|. .+|. ...++++..+++.
T Consensus 237 G~v~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~-------~~~~--------~~~~a~~~Al~~a-- 299 (418)
T PRK07910 237 GFVFGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPD-------PNGE--------RAGHAMTRAIELA-- 299 (418)
T ss_pred CEeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCC-------CCHH--------HHHHHHHHHHHHh--
Confidence 347999999999875321 111112222221 111111121 1221 1223344444443
Q ss_pred hhcCCCCCCCCceeeccCCchHHHHHH
Q 012353 231 LEGKQFSLSNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 231 ~~~~~~~~~did~~~~H~p~~km~~~~ 257 (465)
+++++|||++..|..+++..+.+
T Consensus 300 ----gi~~~did~ie~hgtgt~~~D~~ 322 (418)
T PRK07910 300 ----GLTPGDIDHVNAHATGTSVGDVA 322 (418)
T ss_pred ----CCCHHHCCEEEcCCcCCCCCCHH
Confidence 78999999999999888765543
No 101
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.72 E-value=5e-08 Score=101.98 Aligned_cols=98 Identities=18% Similarity=0.231 Sum_probs=84.1
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHH
Q 012353 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (465)
Q Consensus 49 ~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~ 128 (465)
.+.+..+|+.+|++.+|+++|++|++||.+++|+..+.-..+.++..+...+|+ +..++++.++++|++|+.|+..|.
T Consensus 25 ~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl--~~~~P~~tV~~aCaSG~~Ai~~Aa 102 (428)
T PRK08963 25 HGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGM--NVHTDAYSVSRACATSFQAVANVA 102 (428)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCC--CCCCcceeehhhhHHHHHHHHHHH
Confidence 466789999999999999999999999999999865433234456567788897 446889999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEEecccc
Q 012353 129 NWVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 129 ~~l~sg~~~~~~aLVVasD~~~ 150 (465)
..|++|.+ +.|||++.|..+
T Consensus 103 ~~I~sG~~--dvvLvgG~Esms 122 (428)
T PRK08963 103 ESIMAGTI--DIGIAGGADSSS 122 (428)
T ss_pred HHHHCCCC--CEEEEecccccC
Confidence 99999977 999999999764
No 102
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.69 E-value=8.4e-08 Score=99.12 Aligned_cols=97 Identities=8% Similarity=0.039 Sum_probs=81.1
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~ 129 (465)
+.+..+|+.+|++++|+++|+++++||.+++++..+.......+..+...+|+ +.+++++.+.++|.+++.|+..|..
T Consensus 23 ~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl--~~~~p~~~v~~~caSg~~av~~Aa~ 100 (388)
T PRK06366 23 KIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGL--PFGVTKYTVNVVCASGMLAVESAAR 100 (388)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCC--CCCCcceeeechhhHHHHHHHHHHH
Confidence 36789999999999999999999999999998764322123446678888997 4457888888999999999999999
Q ss_pred HHHcCCCCCCEEEEEEecccc
Q 012353 130 WVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVasD~~~ 150 (465)
.|++|.+ +.|||++.|..+
T Consensus 101 ~I~sG~~--d~vla~G~e~ms 119 (388)
T PRK06366 101 EIMLGER--DLVIAGGMENMS 119 (388)
T ss_pred HHhcCCC--CEEEEEeeEccc
Confidence 9999977 999998889753
No 103
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.68 E-value=1.1e-07 Score=98.58 Aligned_cols=97 Identities=15% Similarity=0.173 Sum_probs=83.6
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCC-cccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~ 128 (465)
+.+..+|+.+|++++|+++|+++++||.+++|+..+.-. .+.++..+...+|+ +..++++.+.++|++|..|+..|.
T Consensus 23 ~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl--p~~~p~~tV~~~CaSG~~Ai~~A~ 100 (401)
T PRK08131 23 SVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGL--PVTVPGQTVNRLCASGLAAVIDAA 100 (401)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCC--CCCCceeeeechhhhHHHHHHHHH
Confidence 677899999999999999999999999999998753322 34556667788887 446889999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEEecccc
Q 012353 129 NWVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 129 ~~l~sg~~~~~~aLVVasD~~~ 150 (465)
..|++|.+ +.+||++.|..+
T Consensus 101 ~~I~sG~~--dvvlagG~Esms 120 (401)
T PRK08131 101 RAITCGEG--DLYLAGGVESMS 120 (401)
T ss_pred HHHHCCCC--CEEEEEEecCCC
Confidence 99999977 999999999764
No 104
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=98.65 E-value=1.4e-07 Score=97.43 Aligned_cols=97 Identities=10% Similarity=0.085 Sum_probs=81.1
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCc-ccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKS-KSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~-ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~ 128 (465)
+.++.+|+.+|++.+|+++|++|++||.+++|+....... ...+-.+...+|+ ..+++++.+.++|++|..|+..|.
T Consensus 23 ~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl--~~~~p~~tV~~~CaSG~~A~~~A~ 100 (387)
T PRK07850 23 GLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGL--PYHVGATTIDCQCGSAQQANHLVA 100 (387)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCC--CCCCceEEEecccccHHHHHHHHH
Confidence 5578999999999999999999999999999875432221 2244455666887 446899999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEEecccc
Q 012353 129 NWVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 129 ~~l~sg~~~~~~aLVVasD~~~ 150 (465)
..|++|.. +.+||++.|.++
T Consensus 101 ~~I~sG~~--dvvla~G~E~mS 120 (387)
T PRK07850 101 GLIAAGAI--DVGIACGVEAMS 120 (387)
T ss_pred HHHHCCCC--CEEEEEeEecCC
Confidence 99999977 999999999984
No 105
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=98.65 E-value=1.6e-07 Score=97.25 Aligned_cols=97 Identities=10% Similarity=0.042 Sum_probs=80.7
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~ 129 (465)
+.+..+|+++|++.+|+++|+++++||.|++++.......+..+..+...+|+ +.+++++.+.++|.+++.|+..|..
T Consensus 22 ~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl--~~~~p~~~v~~~caSg~~av~~Aa~ 99 (394)
T PLN02644 22 SLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGL--PPSTICTTVNKVCASGMKAVMLAAQ 99 (394)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCC--CCCCceEEEeccchHHHHHHHHHHH
Confidence 46789999999999999999999999999988654322223344457788897 4567778889999999999999999
Q ss_pred HHHcCCCCCCEEEEEEecccc
Q 012353 130 WVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVasD~~~ 150 (465)
.|++|.+ +.|||++.|..+
T Consensus 100 ~I~sG~~--d~vlv~G~E~~s 118 (394)
T PLN02644 100 SIQLGIN--DVVVAGGMESMS 118 (394)
T ss_pred HHHcCCC--CEEEEEeEEecC
Confidence 9999977 999999988764
No 106
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.64 E-value=1.3e-07 Score=98.81 Aligned_cols=107 Identities=8% Similarity=-0.057 Sum_probs=82.8
Q ss_pred hhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHH-HHHHHHhcccCCCCceeEeecC
Q 012353 37 IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIK-TFLMQIFEKFGNTDIEGVDSTN 115 (465)
Q Consensus 37 ~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a-~~l~~~LGl~g~~~~~~~di~~ 115 (465)
.|++...+.-...+.+..+|+++|++.+|+++|+++++||.+++++.+........+ ..+...||+ +..+++.+.+
T Consensus 21 vG~g~Tpfgr~~~~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl---~~~~~~~v~~ 97 (430)
T PRK06365 21 VAAGVTKFDKASPYMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGL---VPKPSKRIEG 97 (430)
T ss_pred EEeeecCccccCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCC---CCCceEEEeC
Confidence 455555433212356778999999999999999999999998877544322222222 346789997 3477888999
Q ss_pred cChhHHHHHHHHHHHHHcCCCCCCEEEEEEecc
Q 012353 116 ACYGGTAALFNCVNWVESSSWDGRYGLVVCTDS 148 (465)
Q Consensus 116 aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~ 148 (465)
+|.++..|+..|...|++|.+ +.|||+++|.
T Consensus 98 ~~aSg~~ai~~A~~~I~sG~~--~~vLv~G~e~ 128 (430)
T PRK06365 98 GGATGGLAFQAGYEEIASGRM--DCVAVYGFET 128 (430)
T ss_pred CcHHHHHHHHHHHHHHHcCCC--CEEEEEEeee
Confidence 999999999999999999977 9999999884
No 107
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.64 E-value=1.1e-07 Score=99.22 Aligned_cols=97 Identities=20% Similarity=0.243 Sum_probs=80.6
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~ 129 (465)
+.+..+|+.+|++.+|+++++++++||.+++++..+....+.++-.+.-..|+ ...++++.+.++|++|..|+..|..
T Consensus 28 ~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl--~~~~p~~~V~~~CaSG~~A~~~a~~ 105 (430)
T TIGR02446 28 GIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGM--NVHTDAYSVTRACATSFQSAVNVAE 105 (430)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCC--CCCCchhhhhhhhhHHHHHHHHHHH
Confidence 56889999999999999999999999999999765432222333333333587 4478999999999999999999999
Q ss_pred HHHcCCCCCCEEEEEEecccc
Q 012353 130 WVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVasD~~~ 150 (465)
.|++|.+ +.+||++.|..+
T Consensus 106 ~I~sG~~--dvvla~G~E~mS 124 (430)
T TIGR02446 106 SIMAGAI--DIGIAGGADSSS 124 (430)
T ss_pred HHHCCCC--CEEEEeeeEccc
Confidence 9999977 999999999985
No 108
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=98.64 E-value=1e-07 Score=98.32 Aligned_cols=97 Identities=10% Similarity=0.132 Sum_probs=83.7
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~ 129 (465)
+..+.+|+.+|++.+|+++|++|++||.|++|+..+.......+..+...+|+ +..++++.+.++|.+|+.|+..|..
T Consensus 24 ~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl--~~~~p~~~V~~~CaSG~~Ai~~A~~ 101 (392)
T PRK06633 24 TTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGI--PKEVPGYTINKVCGSGLKSVALAAN 101 (392)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCC--CCCccchhhcchhHHHHHHHHHHHH
Confidence 66799999999999999999999999999999765433334556667778887 4468999999999999999999999
Q ss_pred HHHcCCCCCCEEEEEEecccc
Q 012353 130 WVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVasD~~~ 150 (465)
.|++|.+ +.+||++.|..+
T Consensus 102 ~I~sG~~--dvvla~G~E~ms 120 (392)
T PRK06633 102 SIMTGDN--EIVIAGGQENMS 120 (392)
T ss_pred HHHcCCC--CEEEEcccccCC
Confidence 9999977 999999999874
No 109
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.63 E-value=1.5e-07 Score=97.48 Aligned_cols=97 Identities=8% Similarity=0.114 Sum_probs=84.4
Q ss_pred CCCHHHHHHHHHHHHHHH-CCCCcCCccEEEEEeecCCCC-cccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEK-YKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~-agi~~~~Id~li~~T~s~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A 127 (465)
+.++.+|+..|++.+|++ +|+++++||.|++|+..+... .+..+-.+...+|+ +.+++++.|.++|++|..|+..|
T Consensus 23 ~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl--~~~vP~~tV~~aCaSG~~Ai~~A 100 (401)
T PRK09050 23 SVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGL--PVSVPGTTINRLCGSGMDAVGTA 100 (401)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCC--CCCCceEEEecccccHHHHHHHH
Confidence 677899999999999996 799999999999997654322 34566678889998 56799999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEEecccc
Q 012353 128 VNWVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~~ 150 (465)
...|++|.. +.+||++.|.++
T Consensus 101 ~~~I~sG~~--dvvlagGvEsmS 121 (401)
T PRK09050 101 ARAIKAGEA--ELMIAGGVESMS 121 (401)
T ss_pred HHHHHCCCC--CEEEEecccccc
Confidence 999999977 999999999875
No 110
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.63 E-value=1.9e-07 Score=96.73 Aligned_cols=98 Identities=11% Similarity=0.116 Sum_probs=85.2
Q ss_pred CCCHHHHHHHHHHHHHHH-CCCCcCCccEEEEEeecCCCC-cccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEK-YKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~-agi~~~~Id~li~~T~s~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A 127 (465)
+.++.+|+..|++.+|++ ++++|++||.||+|+..+... .+..+..+...+|+ +.+++++.|.++|++|+.|+.+|
T Consensus 23 ~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl--~~~vp~~tV~~~CaSG~~Av~~A 100 (400)
T PRK13359 23 SVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGL--PHGVPGSTINRLCGSGMDAVGVA 100 (400)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCC--CCCCceEEEeccchhHHHHHHHH
Confidence 457899999999999997 599999999999997764322 36678888889998 55699999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEEeccccc
Q 012353 128 VNWVESSSWDGRYGLVVCTDSAVY 151 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~~y 151 (465)
...|++|.. +.+|+++.|..+.
T Consensus 101 ~~~I~sG~~--divlagGvEsmS~ 122 (400)
T PRK13359 101 ARAIKSGEA--ALMIAGGVESMSR 122 (400)
T ss_pred HHHHHcCCC--CEEEEeeeeccCC
Confidence 999999977 9999999998753
No 111
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.61 E-value=2.6e-07 Score=96.70 Aligned_cols=100 Identities=16% Similarity=0.118 Sum_probs=81.1
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCcCC--ccEEEEEeecCCC--CcccHHHHHHHHhccc----CCCCceeEeecCcChhH
Q 012353 49 EVEDVISMSLTAVTNLLEKYKIDPKQ--IGRLEVGSETVID--KSKSIKTFLMQIFEKF----GNTDIEGVDSTNACYGG 120 (465)
Q Consensus 49 ~~Ed~~~la~~Aa~~aL~~agi~~~~--Id~li~~T~s~~~--~~ps~a~~l~~~LGl~----g~~~~~~~di~~aC~gg 120 (465)
.+.+..+|+.+|++++|+++|+++++ ||.+++++..... ..+..+..+...+|+. |...++++.+.++|.+|
T Consensus 44 ~~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG 123 (438)
T PTZ00455 44 ENKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEGACASG 123 (438)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEECcCHHH
Confidence 35678999999999999999999999 9999998764322 2344566666555541 12567888999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEEEecccc
Q 012353 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 121 ~~AL~~A~~~l~sg~~~~~~aLVVasD~~~ 150 (465)
..|+..|...|++|.+ +.|||++.|..+
T Consensus 124 ~~Ai~~A~~~I~sG~~--dvvlv~G~E~ms 151 (438)
T PTZ00455 124 GLAVQSAWEALLAGTS--DIALVVGVEVQT 151 (438)
T ss_pred HHHHHHHHHHHHCCCC--CEEEEEEEeecc
Confidence 9999999999999977 999999999864
No 112
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=98.55 E-value=3.4e-07 Score=94.83 Aligned_cols=97 Identities=10% Similarity=0.120 Sum_probs=83.9
Q ss_pred CCCHHHHHHHHHHHHHHH-CCCCcCCccEEEEEeecCCC-CcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEK-YKIDPKQIGRLEVGSETVID-KSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~-agi~~~~Id~li~~T~s~~~-~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A 127 (465)
+.++.+|+.+|++.+|++ +++++++||.|++|+....- ..+..+..+...+|+ ..+++++.|.++|.+|+.|+..|
T Consensus 22 ~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl--~~~~p~~~V~~~CaSG~~Ai~~a 99 (400)
T TIGR02430 22 SVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGL--PVSVPGTTVNRLCGSGLDAIGMA 99 (400)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCC--CCCCceEEeechhhhHHHHHHHH
Confidence 667899999999999995 69999999999999765322 134567778899998 44699999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEEecccc
Q 012353 128 VNWVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~~ 150 (465)
...|++|.. +.+||++.|..+
T Consensus 100 ~~~I~sG~~--d~~la~G~E~ms 120 (400)
T TIGR02430 100 ARAIKAGEA--DLLIAGGVESMS 120 (400)
T ss_pred HHHHHCCCC--CEEEEecccccc
Confidence 999999977 999999999884
No 113
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=98.55 E-value=4.1e-07 Score=93.96 Aligned_cols=97 Identities=12% Similarity=0.151 Sum_probs=78.8
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCC-cccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~ 128 (465)
+.++.+|+.+|++.+|+++++++++||.+++++..+... .+..+....-.-|+ ..+++++.+.++|++|..|+..|.
T Consensus 23 ~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl--~~~vP~~tV~~~CaSG~~Ai~~A~ 100 (390)
T PRK06504 23 GWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKL--PESVPGTSIDRQCGSSQQALHFAA 100 (390)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCC--CCCCceEEEechhhHHHHHHHHHH
Confidence 667899999999999999999999999999997653221 23333222222365 457899999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEEecccc
Q 012353 129 NWVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 129 ~~l~sg~~~~~~aLVVasD~~~ 150 (465)
..|++|.+ +.+||++.|..+
T Consensus 101 ~~I~sG~~--dvvLagGvEsmS 120 (390)
T PRK06504 101 QAVMSGTM--DIVIAAGVESMT 120 (390)
T ss_pred HHHHCCCC--CEEEEeeeeecC
Confidence 99999977 999999999874
No 114
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.50 E-value=4.9e-07 Score=93.38 Aligned_cols=97 Identities=13% Similarity=0.092 Sum_probs=81.8
Q ss_pred CCCHHHHHHHHHHHHHHH-CCCCcCCccEEEEEeecCCCC-cccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEK-YKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~-agi~~~~Id~li~~T~s~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A 127 (465)
+.+..+|+..|++.+|++ +|+++++||.+++++...... .+..+..+...+|+ +..++++.+.++|++|..|+..|
T Consensus 24 ~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl--~~~~p~~~V~~~caSG~~Ai~~A 101 (387)
T PRK08947 24 NVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGI--PHSVPAVTVNRLCGSSMQALHDA 101 (387)
T ss_pred CCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCC--CCCCcceeeechhHHHHHHHHHH
Confidence 667899999999999997 699999999999997653322 23455567777887 44688899999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEEecccc
Q 012353 128 VNWVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~~ 150 (465)
...|++|.+ +.|||++.|..+
T Consensus 102 ~~~I~sG~~--d~vlv~G~E~ms 122 (387)
T PRK08947 102 ARAIMTGDG--DVFLIGGVEHMG 122 (387)
T ss_pred HHHHHCCCC--CEEEEccccccc
Confidence 999999987 999999999764
No 115
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.47 E-value=5.6e-07 Score=92.88 Aligned_cols=102 Identities=5% Similarity=-0.052 Sum_probs=81.3
Q ss_pred hhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCc
Q 012353 37 IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNA 116 (465)
Q Consensus 37 ~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~a 116 (465)
+|+|+..+.. .++.+..+|+.+|++++|+++|++++|||.+++.+..+. .....+.+.||+ ...+...+.++
T Consensus 10 vG~g~t~~~~-~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~----~~~~~~~~~lGl---~~~~~~~v~~g 81 (388)
T PRK08142 10 VGAYEHPTRK-APDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDAPG----LGPASMVDYLGL---KLRHVDSTETG 81 (388)
T ss_pred EEEeecccee-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCC----ccHHHHHHhCCC---CCeeeccccCC
Confidence 5778776653 356778999999999999999999999999875322211 112458899997 33566777899
Q ss_pred ChhHHHHHHHHHHHHHcCCCCCCEEEEEEecc
Q 012353 117 CYGGTAALFNCVNWVESSSWDGRYGLVVCTDS 148 (465)
Q Consensus 117 C~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~ 148 (465)
|.++..++..|...|++|.+ +.||||+.|.
T Consensus 82 g~s~~~a~~~A~~~I~sG~~--d~vLvvg~e~ 111 (388)
T PRK08142 82 GSSYLAHVGHAAQAIAAGKC--SVALITLAGR 111 (388)
T ss_pred cHHHHHHHHHHHHHHHcCCC--CEEEEEeeee
Confidence 99999999999999999988 9999999775
No 116
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.46 E-value=9.3e-07 Score=92.37 Aligned_cols=97 Identities=13% Similarity=0.142 Sum_probs=78.4
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~ 129 (465)
+.+..+|+.+|++.+|+++|+++++||.+++|+..+....+..+..+.-..|+ ....+++.+.++|++|+.|+..|..
T Consensus 28 ~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl--~~~~p~~~V~~~CaSG~~ai~~A~~ 105 (427)
T PRK09268 28 DASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSAL--SPYTPAYDLQQACGTGLEAAILVAN 105 (427)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCC--CCCCceeeeechhhHHHHHHHHHHH
Confidence 56789999999999999999999999999999765422122334443333444 3457889999999999999999999
Q ss_pred HHHcCCCCCCEEEEEEecccc
Q 012353 130 WVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVasD~~~ 150 (465)
.|++|.. +.+||++.|..+
T Consensus 106 ~I~sG~~--d~vlvgG~E~ms 124 (427)
T PRK09268 106 KIALGQI--DSGIAGGVDTTS 124 (427)
T ss_pred HHHCCCC--CEEEEeeEEccC
Confidence 9999977 999999999764
No 117
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=98.45 E-value=8.1e-07 Score=91.67 Aligned_cols=95 Identities=13% Similarity=0.132 Sum_probs=74.2
Q ss_pred CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecC-CCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHH
Q 012353 51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETV-IDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (465)
Q Consensus 51 Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~-~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~ 129 (465)
.+..+|+.+|++++|+++|+++++||.|++++... ....+..+....-.+|+ ...+.++.+.++|.+++.|+..|..
T Consensus 24 ~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl--~~~~p~~~v~~acaSg~~Av~~Aa~ 101 (382)
T PRK07801 24 VHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGL--PEEVPGVTVDRQCGSSQQAIHFAAQ 101 (382)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCC--CCCCceeeecchhhhHHHHHHHHHH
Confidence 67899999999999999999999999999985421 11112223322224565 3457788889999999999999999
Q ss_pred HHHcCCCCCCEEEEEEeccc
Q 012353 130 WVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVasD~~ 149 (465)
.|++|.+ +.|||++.|..
T Consensus 102 ~I~sG~~--d~vLv~G~e~m 119 (382)
T PRK07801 102 AVMSGTQ--DLVVAGGVQNM 119 (382)
T ss_pred HHHCCCC--CEEEEcchhhh
Confidence 9999987 99999988854
No 118
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.43 E-value=7.1e-07 Score=92.06 Aligned_cols=97 Identities=14% Similarity=0.116 Sum_probs=79.0
Q ss_pred CCCHHHHHHHHHHHHHHH-CCCCcCCccEEEEEeecCCCC-cccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEK-YKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~-agi~~~~Id~li~~T~s~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A 127 (465)
+.++.+|+.+|++.+|++ +|++|++||.+++|+...... ....+..+.-..|+ ...++++.++++|++|..|+..|
T Consensus 22 ~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~--~~~~p~~tV~~~CaSG~~Ai~~A 99 (385)
T TIGR02445 22 NTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQI--PHTSAAVTVNRLCGSSMQALHDA 99 (385)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCC--CCCcchhhhhhhhHHHHHHHHHH
Confidence 667899999999999997 599999999999997753221 22344444445566 45588899999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEEecccc
Q 012353 128 VNWVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~~ 150 (465)
...|++|.. +.+||++.|.++
T Consensus 100 a~~I~sG~~--d~vlagG~E~ms 120 (385)
T TIGR02445 100 ARAIMTGDA--DVCLVGGVEHMG 120 (385)
T ss_pred HHHHHCCCC--CEEEEeeehhcc
Confidence 999999977 999999999764
No 119
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.38 E-value=1.9e-06 Score=83.50 Aligned_cols=114 Identities=23% Similarity=0.215 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCcc-----EEEEEeecCCC---------------Cc--------c-cHHHHHHHHhccc
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQIG-----RLEVGSETVID---------------KS--------K-SIKTFLMQIFEKF 103 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~Id-----~li~~T~s~~~---------------~~--------p-s~a~~l~~~LGl~ 103 (465)
..-|++.|+.+||+++|+++.+++ .|++||..+.+ .. + ..+..|+..+|+.
T Consensus 87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~ 166 (254)
T PF00109_consen 87 QSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGLR 166 (254)
T ss_dssp HHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-
T ss_pred hhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCCC
Confidence 468999999999999999885332 24567665521 11 1 2567899999983
Q ss_pred CCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc-c------c------cC-CC--------CCcccc
Q 012353 104 GNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------Y------AE-GP--------ARPTGG 161 (465)
Q Consensus 104 g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~------y------~~-~~--------~~~t~G 161 (465)
-+++-+..+|++++.||..|..+|++|.+ +.|||.++|.. . + .. .+ .....|
T Consensus 167 ----G~~~tv~~acaSgl~Al~~A~~~I~~G~~--d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~~G~v~g 240 (254)
T PF00109_consen 167 ----GPSYTVSTACASGLAALEAAYRAIRSGEA--DVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFADGFVLG 240 (254)
T ss_dssp ----SSEEEEE-GGGHHHHHHHHHHHHHHTTSS--SEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB-SB-BB
T ss_pred ----Cccccccccccccccccchhccccccccc--cccccccccccccccccccccccccccccccccccCCCCCCEEEE
Confidence 24566789999999999999999999987 99999999943 1 1 11 11 124589
Q ss_pred cceeeeeecCC
Q 012353 162 AAAVVMLVGPD 172 (465)
Q Consensus 162 dGA~A~Ll~~~ 172 (465)
+||+++||.+.
T Consensus 241 EGa~~~vLe~~ 251 (254)
T PF00109_consen 241 EGAGALVLERL 251 (254)
T ss_dssp -EEEEEEEEEH
T ss_pred CceEEEEEEEh
Confidence 99999999763
No 120
>PRK07855 lipid-transfer protein; Provisional
Probab=98.37 E-value=1.6e-06 Score=89.52 Aligned_cols=100 Identities=9% Similarity=0.003 Sum_probs=78.8
Q ss_pred hhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCc
Q 012353 37 IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNA 116 (465)
Q Consensus 37 ~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~a 116 (465)
+|+|+..+.- .++.+..+|+.+|++++|+++|++++|||.+++.+.. ..+. ..|.+.||+ ........+.++
T Consensus 9 vG~g~t~~~r-~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~~--~~l~~~lGl--~~~~~~~~v~~g 80 (386)
T PRK07855 9 VGIGATEFSK-NSGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMD---TNPE--IAVARALGI--GELKFFSRIHYG 80 (386)
T ss_pred EEeeeccccc-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCc---cccH--HHHHHHCCC--CCCcceeeecCC
Confidence 5777665432 2456789999999999999999999999999874432 1222 568899997 332344577899
Q ss_pred ChhHHHHHHHHHHHHHcCCCCCCEEEEEEe
Q 012353 117 CYGGTAALFNCVNWVESSSWDGRYGLVVCT 146 (465)
Q Consensus 117 C~gg~~AL~~A~~~l~sg~~~~~~aLVVas 146 (465)
|.++..+|..|...|++|.+ +.|||+++
T Consensus 81 g~sg~~~~~~A~~~I~sG~~--d~vLv~g~ 108 (386)
T PRK07855 81 GGAACATVQQAAMAVATGVA--DVVVCYRA 108 (386)
T ss_pred cHHHHHHHHHHHHHHHCCCC--CEEEEEee
Confidence 99999999999999999988 99999876
No 121
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.33 E-value=2.9e-06 Score=90.27 Aligned_cols=107 Identities=11% Similarity=0.069 Sum_probs=83.3
Q ss_pred hhhcCeEEecCCCCC--CHHHHHHHHHHHHHHHCCCC--cCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEe
Q 012353 37 IGLGQECMAFCSEVE--DVISMSLTAVTNLLEKYKID--PKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVD 112 (465)
Q Consensus 37 ~Gig~r~~av~~~~E--d~~~la~~Aa~~aL~~agi~--~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~d 112 (465)
+|+||..+.-..++. +..+|+.+|++++|+++|++ +++||.|++++.... ........|++.||+ .+ .....
T Consensus 9 VGvG~t~~~~~~~~~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~-~~~~~~~~la~~lGl--~p-~~~~~ 84 (498)
T PRK08257 9 VGVGQVTERPDDPAYGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSW-RYRDPPGLLAERLGA--DP-ARTVY 84 (498)
T ss_pred EEeeecccccCCcccCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccc-cccCHHHHHHHHcCC--CC-cceeE
Confidence 588886654212232 78999999999999999999 999999998755322 122345789999997 33 34455
Q ss_pred ecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc
Q 012353 113 STNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 113 i~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~ 149 (465)
...+|.++..+|..|...|++|.+ +.|||+++|..
T Consensus 85 ~~~GG~s~~~~v~~Aa~~IasG~a--dvVLv~G~E~~ 119 (498)
T PRK08257 85 SPVGGNSPQRLVNEAALRIAAGEA--DVALVAGAEAQ 119 (498)
T ss_pred ecCCCHHHHHHHHHHHHHHHCCCC--CEEEEeeeeec
Confidence 667888999999999999999987 99999999975
No 122
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.33 E-value=2.9e-05 Score=95.90 Aligned_cols=140 Identities=13% Similarity=0.044 Sum_probs=87.7
Q ss_pred HHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-------cc-------CCC--
Q 012353 92 IKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------YA-------EGP-- 155 (465)
Q Consensus 92 ~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y~-------~~~-- 155 (465)
++.+|...||+.| +++-+..||++++.||..|..+|++|.+ +.+||.++|... +. ++.
T Consensus 185 ~A~RIS~~f~L~G----ps~tVdtACsSSL~Al~~A~~~L~~G~~--D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~cr 258 (2582)
T TIGR02813 185 ISGRIANRFDLGG----MNCVVDAACAGSLAAIRMALSELLEGRS--EMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQ 258 (2582)
T ss_pred HHHHHHHHhCCCC----CcccccchhHHHHHHHHHHHHHHHcCCC--CEEEEecceeeCCHHHHHHHHhccCcCCCCCcc
Confidence 5778889999833 4567889999999999999999999987 999998887631 11 111
Q ss_pred ------CCcccccceeeeeecCCCCc-----ccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHH
Q 012353 156 ------ARPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCL 224 (465)
Q Consensus 156 ------~~~t~GdGA~A~Ll~~~~~~-----~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~ 224 (465)
+....|+|++++||.+-... .+..-+.|+...+ |-.... ..-|..+|+ .+++++.
T Consensus 259 pFD~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~--DG~~~~--itaP~~~gq----------~~~i~~A 324 (2582)
T TIGR02813 259 PFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASS--DGKFKS--IYAPRPEGQ----------AKALKRA 324 (2582)
T ss_pred CCCCCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcC--CCCCCC--CcCCCHHHH----------HHHHHHH
Confidence 12457999999999874321 1111123332221 101000 001222232 2233333
Q ss_pred HHHhhhhhcCCCCCCCCceeeccCCchHHHHHH
Q 012353 225 CSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 225 ~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~ 257 (465)
++.. |++++||+|+-.|..+++..+.+
T Consensus 325 l~~A------gi~p~~I~yIeaHGTGT~~gD~~ 351 (2582)
T TIGR02813 325 YDDA------GFAPHTCGLIEAHGTGTAAGDVA 351 (2582)
T ss_pred HHHc------CCCHHHCCEEEecCCCCCCCCHH
Confidence 3333 89999999999999888776654
No 123
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.30 E-value=7.7e-05 Score=72.63 Aligned_cols=111 Identities=18% Similarity=0.118 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHH
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVE 132 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~ 132 (465)
-..|..+|++.+|+++++.++|||.++-|--...- -.+++.++.|++ +.+-+=.||+....+|.+|..+|.
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~---i~s~f~ar~l~i------Pf~GlygACST~~e~l~laa~~vd 121 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQI---ISSSFAARDLGI------PFLGLYGACSTMMESLALAAMLVD 121 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCC---CHHHHHHHHHT--------EEEB--CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhh---HHHHHHHHhcCC------CccchhhHHHHHHHHHHHHHHHHh
Confidence 46888999999999999999999999865433322 357789999984 567788999999999999999999
Q ss_pred cCCCCCCEEEEEEeccc-------cccC--CCCC-cc---cccceeeeeecCCCC
Q 012353 133 SSSWDGRYGLVVCTDSA-------VYAE--GPAR-PT---GGAAAVVMLVGPDAP 174 (465)
Q Consensus 133 sg~~~~~~aLVVasD~~-------~y~~--~~~~-~t---~GdGA~A~Ll~~~~~ 174 (465)
+|.. ++||+.+|-.. +|.. +.-+ +| -=-||.|+||++...
T Consensus 122 gg~a--~~vla~tSSH~~tAERQfR~P~EyG~Qrp~tAqwTVTGaGa~il~~~~~ 174 (329)
T PF07451_consen 122 GGFA--DYVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAAILSKEGS 174 (329)
T ss_dssp TTS---SEEEEEEEE-CCHHHHHT---GGGT----TT--EE--EEEEEEEESS--
T ss_pred CCCc--ceEEEEeccccchhhhhccCchhccCCCCCcccEEEeceEEEEEecCCC
Confidence 9987 99999887654 3321 1111 11 234566889988753
No 124
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=98.26 E-value=4.7e-06 Score=85.81 Aligned_cols=104 Identities=13% Similarity=0.086 Sum_probs=75.6
Q ss_pred hhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCC-CCc-CCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec
Q 012353 37 IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYK-IDP-KQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST 114 (465)
Q Consensus 37 ~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~ag-i~~-~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~ 114 (465)
+|+|+..+.-..++.+..+|+.+|++++|+++| +++ +|||.+++++.............+.+.||+. ....+-+
T Consensus 9 vG~g~t~~~~~~~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~---~~~~~~v- 84 (385)
T PRK06066 9 VGIGWYGFRPTTPEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGA---MRPTMTV- 84 (385)
T ss_pred EEeeecCCcCCCCCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccC---CCCeEEE-
Confidence 577776654213478899999999999999999 997 7999998754211111111223466888862 2223333
Q ss_pred CcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecc
Q 012353 115 NACYGGTAALFNCVNWVESSSWDGRYGLVVCTDS 148 (465)
Q Consensus 115 ~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~ 148 (465)
|.++..++..|...|++|.+ +.|||++.+.
T Consensus 85 --~~sg~~a~~~A~~aV~sG~~--d~vLv~g~~~ 114 (385)
T PRK06066 85 --AGDGLQGLAHAVMHINSGLA--NVVVVEAHSK 114 (385)
T ss_pred --eCcHHHHHHHHHHHHHcCCC--CEEEEEEEee
Confidence 88999999999999999988 9999999874
No 125
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=98.25 E-value=6.6e-06 Score=85.17 Aligned_cols=98 Identities=11% Similarity=0.075 Sum_probs=86.1
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCC-cccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHH
Q 012353 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (465)
Q Consensus 49 ~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A 127 (465)
.+-++.+|+..+.+.+|++++++|++||-||+|...+.-. .+.++-...-..|+ +..++++.|+..|.+|+.|+.+|
T Consensus 25 ~~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~agl--p~~vp~~tvnr~C~Sgl~ai~~a 102 (417)
T PRK06025 25 AHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGY--DIKASGVTLDRFCGGGITSVNLA 102 (417)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCC--CCCCCeeeeccccchHHHHHHHH
Confidence 3678999999999999999999999999999998765433 35677777777788 67899999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEEecccc
Q 012353 128 VNWVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~~ 150 (465)
...|++|.. +.+|+.+.|.++
T Consensus 103 a~~I~~G~~--~~~laGG~EsmS 123 (417)
T PRK06025 103 AAQIMSGME--DLVIAGGTEMMS 123 (417)
T ss_pred HHHHHcCCC--CEEEEeeeeccC
Confidence 999999966 999999999985
No 126
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.20 E-value=2.3e-05 Score=81.10 Aligned_cols=182 Identities=16% Similarity=0.189 Sum_probs=116.3
Q ss_pred CHHHHHHHHHHHHHHHCCCC-cCCcc---EEEEEeecCCCC--------------------------cc-cHHHHHHHHh
Q 012353 52 DVISMSLTAVTNLLEKYKID-PKQIG---RLEVGSETVIDK--------------------------SK-SIKTFLMQIF 100 (465)
Q Consensus 52 d~~~la~~Aa~~aL~~agi~-~~~Id---~li~~T~s~~~~--------------------------~p-s~a~~l~~~L 100 (465)
....+++.|+.+||+++|++ ...++ .++++|..+... .+ ..+..|+..+
T Consensus 70 ~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~ 149 (412)
T COG0304 70 RFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVF 149 (412)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHh
Confidence 46789999999999999997 33343 123444332110 11 3566788888
Q ss_pred cccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc-------cc------cC---C---CCC----
Q 012353 101 EKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-------VY------AE---G---PAR---- 157 (465)
Q Consensus 101 Gl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-------~y------~~---~---~~~---- 157 (465)
|+.| +.+.+..||+++..|+..|..+|+.|.. +.+|+.++|.. .| .. . ..+
T Consensus 150 g~~G----~~~~~~tACatg~~AIg~A~~~I~~G~a--d~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~ 223 (412)
T COG0304 150 GLKG----PNYTPVTACATGAHAIGDAVRLIRLGKA--DVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDK 223 (412)
T ss_pred CCCC----CcCChhhhHHhHHHHHHHHHHHHHcCCC--CEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCC
Confidence 8733 3456789999999999999999999977 99999999773 01 01 1 112
Q ss_pred ----cccccceeeeeecCCCC-----cccccccccccc-cCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHH
Q 012353 158 ----PTGGAAAVVMLVGPDAP-----VAFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSK 227 (465)
Q Consensus 158 ----~t~GdGA~A~Ll~~~~~-----~~~~~~~~~~~~-~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~ 227 (465)
...|.||+++||+.-.- ..+.-.+.|... .+.++.-.|. | +|.-- . .+++..++.
T Consensus 224 ~RdGfv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~-----p--~g~Ga----~----~am~~AL~~ 288 (412)
T COG0304 224 NRDGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPA-----P--DGEGA----I----RAMRAALAD 288 (412)
T ss_pred CCCCEEEecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCC-----C--CCchH----H----HHHHHHHHH
Confidence 35799999999987541 112111333322 2334444443 2 34321 1 344444444
Q ss_pred hhhhhcCCCCCCCCceeeccCCchHHHHHHHHH
Q 012353 228 YEKLEGKQFSLSNADYFVFHSPYNKLVQKSFAR 260 (465)
Q Consensus 228 ~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~ 260 (465)
. |++++||||+..|-..++..++.-..
T Consensus 289 A------gl~~~~idYinaHgTsT~~nD~~E~~ 315 (412)
T COG0304 289 A------GLTPEDIDYINAHGTSTPANDKAESL 315 (412)
T ss_pred c------CCCHhHCCEEeCCCccCCCccHHHHH
Confidence 4 89999999999999888776665433
No 127
>PRK07937 lipid-transfer protein; Provisional
Probab=98.00 E-value=2.8e-05 Score=79.22 Aligned_cols=103 Identities=14% Similarity=0.052 Sum_probs=69.6
Q ss_pred hhhcCeEEecCCCCCCH-HHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcc--cHHHHHHHHhcccCCCCceeEee
Q 012353 37 IGLGQECMAFCSEVEDV-ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSK--SIKTFLMQIFEKFGNTDIEGVDS 113 (465)
Q Consensus 37 ~Gig~r~~av~~~~Ed~-~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~p--s~a~~l~~~LGl~g~~~~~~~di 113 (465)
+|+|+..+....+..+. .+|+.+|++++|+++|++++|||.++.++. ..... .....+...+|+ .+.....-+
T Consensus 7 vG~g~t~~~~~~~~~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~~--~~~~~~~~~~~~~~~~~G~--~~~~~~~~v 82 (352)
T PRK07937 7 VGFAQAPHVRRTDGTTNGVEMLMPCFAELYAELGITKSDIGFWCSGSS--DYLAGRAFSFISAIDSIGA--VPPINESHV 82 (352)
T ss_pred EEeeccccccCCCCCCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcc--ccccccccchhhHHhhccC--CCCCceEEe
Confidence 57777665432222333 899999999999999999999998864432 21111 112334455675 233233333
Q ss_pred cCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecc
Q 012353 114 TNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDS 148 (465)
Q Consensus 114 ~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~ 148 (465)
. .+|..||..|...|++|.+ +.|||++.+.
T Consensus 83 ~---~~g~~a~~~A~~aI~sG~~--d~VLv~g~~k 112 (352)
T PRK07937 83 E---MDAAWALYEAWVKLLTGEV--DTALVYGFGK 112 (352)
T ss_pred c---CcHHHHHHHHHHHHhcCCC--CEEEEEEecc
Confidence 3 3577799999999999988 9999999874
No 128
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=97.80 E-value=2.9e-05 Score=73.65 Aligned_cols=107 Identities=20% Similarity=0.171 Sum_probs=84.9
Q ss_pred hhhhhcCeEEecCC--CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEe
Q 012353 35 YTIGLGQECMAFCS--EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVD 112 (465)
Q Consensus 35 ~~~Gig~r~~av~~--~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~d 112 (465)
|..|+|..++--|. ++-|-.+|+.+|..++|+++++..++|+--+++-..++.....-| .-.+|+ +.++.+.
T Consensus 9 yvvgvgmtkf~kpg~~~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdstcgqra---iyevgm---tgipi~n 82 (408)
T KOG1406|consen 9 YVVGVGMTKFEKPGRVADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDSTCGQRA---IYEVGM---TGIPIYN 82 (408)
T ss_pred EEEecceeeecCCCcccCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCCccchHH---HHhccc---cCcceee
Confidence 45788888753322 345789999999999999999999999887776655544332222 226775 7789999
Q ss_pred ecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc
Q 012353 113 STNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 113 i~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~ 149 (465)
++|+|+.|..||.+|...|++|.. +.||..+-|.+
T Consensus 83 vnnncatgssalflakqiiesgn~--dcvlalgfekm 117 (408)
T KOG1406|consen 83 VNNNCATGSSALFLAKQIIESGNS--DCVLALGFEKM 117 (408)
T ss_pred ccCccccCchHHHHHHHHHhcCCc--ceEEeechhhh
Confidence 999999999999999999999976 99999998887
No 129
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.58 E-value=0.0022 Score=74.24 Aligned_cols=174 Identities=14% Similarity=0.108 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHCCCCcCCcc----EEEEEeecCCCCcc-------------------cHHHHHHHHhcccCCCCceeEe
Q 012353 56 MSLTAVTNLLEKYKIDPKQIG----RLEVGSETVIDKSK-------------------SIKTFLMQIFEKFGNTDIEGVD 112 (465)
Q Consensus 56 la~~Aa~~aL~~agi~~~~Id----~li~~T~s~~~~~p-------------------s~a~~l~~~LGl~g~~~~~~~d 112 (465)
|..+.+.++|+++|+++..+. .|+.+....++... -+++.|...|++.| +.+.
T Consensus 94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~G----Ps~~ 169 (1061)
T COG3321 94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSG----PSVT 169 (1061)
T ss_pred HHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcCCC----CCcc
Confidence 889999999999999999888 46666655544322 26778899999843 5677
Q ss_pred ecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc-----c--ccC-------CC--------CCcccccceeeeeec
Q 012353 113 STNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-----V--YAE-------GP--------ARPTGGAAAVVMLVG 170 (465)
Q Consensus 113 i~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-----~--y~~-------~~--------~~~t~GdGA~A~Ll~ 170 (465)
|..+|++.+.|+.+|+..|.+|.+ ..+|+-+.... . +.. +. +....|.|+++++|.
T Consensus 170 vdtaCSSsLvAvhlA~~sL~~Ge~--d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~vvLK 247 (1061)
T COG3321 170 VDTACSSSLVAVHLACQSLRLGEC--DLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGVVVLK 247 (1061)
T ss_pred ccchhhHHHHHHHHHHHHHHcCCC--CEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEEEeeeEEEEEEE
Confidence 899999999999999999999976 88888777664 1 111 11 123579999999998
Q ss_pred CCCCc-----ccccccccccccCc---ccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 012353 171 PDAPV-----AFESKLRGSHMSHA---YDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD 242 (465)
Q Consensus 171 ~~~~~-----~~~~~~~~~~~~~~---~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did 242 (465)
+-... .|..-+.|+-..+. ..+..|+ + .+-...++..++. +++.+.+|+
T Consensus 248 rl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~---------~--------~aQ~~v~~~al~~------a~i~p~tv~ 304 (1061)
T COG3321 248 RLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPN---------L--------EAQADVIREALAD------AGIDPATVQ 304 (1061)
T ss_pred EhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCC---------H--------HHHHHHHHHHHHh------cCCCcccCc
Confidence 74321 11111222221110 0111111 1 1222233333333 379999999
Q ss_pred eeeccCCchHHHHHHH
Q 012353 243 YFVFHSPYNKLVQKSF 258 (465)
Q Consensus 243 ~~~~H~p~~km~~~~~ 258 (465)
|+=.|...+.+.+-+.
T Consensus 305 yvEaHgTGT~lGDpiE 320 (1061)
T COG3321 305 YVEAHGTGTPLGDPIE 320 (1061)
T ss_pred EEEecCCCCCCcCHHH
Confidence 9999999888776553
No 130
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.29 E-value=0.0011 Score=65.67 Aligned_cols=179 Identities=18% Similarity=0.237 Sum_probs=113.8
Q ss_pred CHHHHHHHHHHHHHHHCCCCcC---Ccc----EEEEEeecCC---------------------CCcc-----cHHHHHHH
Q 012353 52 DVISMSLTAVTNLLEKYKIDPK---QIG----RLEVGSETVI---------------------DKSK-----SIKTFLMQ 98 (465)
Q Consensus 52 d~~~la~~Aa~~aL~~agi~~~---~Id----~li~~T~s~~---------------------~~~p-----s~a~~l~~ 98 (465)
+...||+.|+.++|+++++-+. +.| .|.+||.-+. +..| -.+.+|.-
T Consensus 93 ~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm 172 (440)
T KOG1394|consen 93 KFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSM 172 (440)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhh
Confidence 3578999999999999987654 223 2334443221 1122 23567888
Q ss_pred HhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-------c---------cCCC---CCc-
Q 012353 99 IFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------Y---------AEGP---ARP- 158 (465)
Q Consensus 99 ~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y---------~~~~---~~~- 158 (465)
++|+-| +...++.||+.+.+++-.|.++|+.|.. +..|.-++|.+. | .+.+ +||
T Consensus 173 ~~gl~G----pnhsvSTACATg~h~igda~n~Ir~Gda--DvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPf 246 (440)
T KOG1394|consen 173 KYGLRG----PNHSVSTACATGNHCIGDAFNFIRLGDA--DVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPF 246 (440)
T ss_pred hhcCcC----CchhhHhhhhhccchHHHHHHHHHhCcc--ceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCC
Confidence 888743 3345789999999999999999999955 777777778751 1 1111 233
Q ss_pred -------ccccceeeeeecCC-------CCcccccccccc-cccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHH
Q 012353 159 -------TGGAAAVVMLVGPD-------APVAFESKLRGS-HMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKC 223 (465)
Q Consensus 159 -------t~GdGA~A~Ll~~~-------~~~~~~~~~~~~-~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~ 223 (465)
..|.||+.+|++.= +++ ...+.|. .+.|.+...-|. .||.-. .. |+++
T Consensus 247 D~~RdGFVmGEGagvlvlEelEHA~~RgA~I--~AE~lGygls~Da~HiT~P~-------~dG~Ga----~~----am~r 309 (440)
T KOG1394|consen 247 DKKRDGFVMGEGAGVLVLEELEHAKKRGAPI--YAEVLGYGLSSDAYHITSPD-------PDGAGA----VL----AMER 309 (440)
T ss_pred ccCCCceeeccceeEEehHhHHHHHHcCCce--eHHhhcCcccccccccCCCC-------CCcchH----HH----HHHH
Confidence 46999999998752 222 1112332 233455444443 356432 12 3333
Q ss_pred HHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHH
Q 012353 224 LCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFA 259 (465)
Q Consensus 224 ~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~ 259 (465)
.++.. |+.++||||+-.|..++.+.+.+-.
T Consensus 310 aL~~A------gl~pe~i~YvNAHATST~~GD~aE~ 339 (440)
T KOG1394|consen 310 ALKDA------GLSPEDIDYVNAHATSTPLGDAAEA 339 (440)
T ss_pred HHHHc------CCChhhcCeeecccccCcCchHHHH
Confidence 33333 8999999999999988887776543
No 131
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.27 E-value=0.001 Score=68.86 Aligned_cols=94 Identities=14% Similarity=0.123 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHHC--CCCcCCccEEEEEeecCCC-CcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHH
Q 012353 53 VISMSLTAVTNLLEKY--KIDPKQIGRLEVGSETVID-KSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~a--gi~~~~Id~li~~T~s~~~-~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~ 129 (465)
..++.....+..+++. ++++.+||.+++++..+.- .....+..+...+|+ ..+++++.++.+|.+|..|+..|..
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl--~~~~p~~~V~~~c~SG~~Av~~A~~ 104 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGL--PGSVPAVTVNRACASGLAAVRLAAQ 104 (392)
T ss_pred HHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCC--CCCCCceEEeccchhHHHHHHHHHH
Confidence 4444444444444432 5676678888988666552 355778889999998 4468999999999999999999999
Q ss_pred HHHcCCCCCCEEEEEEecccc
Q 012353 130 WVESSSWDGRYGLVVCTDSAV 150 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVasD~~~ 150 (465)
.|++|.. +.||+++.|..+
T Consensus 105 ~I~sG~~--dvvlagG~E~mS 123 (392)
T COG0183 105 AIASGEA--DVVLAGGVEKMS 123 (392)
T ss_pred HHHCCCC--CEEEEEeeeecc
Confidence 9999976 999999999874
No 132
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=96.24 E-value=0.012 Score=57.79 Aligned_cols=96 Identities=9% Similarity=0.085 Sum_probs=75.7
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~ 129 (465)
.-.+.+|+..|.+.+|+++++++++++-+|++....-...-..+-..+---|| +.++.+..++.-|++|+-|+.+|..
T Consensus 27 sl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGl--p~sv~~tTvNkvCaSgmKAv~laaQ 104 (396)
T KOG1390|consen 27 SLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGL--PYSVPATTVNKVCASGMKAVILAAQ 104 (396)
T ss_pred cCchhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCC--CcceeeEeehhhhhhhHHHHHHHHH
Confidence 45688999999999999999999999999988765443332333333333455 5678889999999999999999999
Q ss_pred HHHcCCCCCCEEEEEEeccc
Q 012353 130 WVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVasD~~ 149 (465)
-|+.|.. +.|+..+.|.+
T Consensus 105 sI~~G~~--divVaGGmEsM 122 (396)
T KOG1390|consen 105 SIQTGHA--DIVVAGGMESM 122 (396)
T ss_pred HHhcCCc--cEEEecccchh
Confidence 9999955 77777777776
No 133
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=95.86 E-value=0.1 Score=49.54 Aligned_cols=116 Identities=16% Similarity=0.090 Sum_probs=79.2
Q ss_pred CHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCC---------------Cccc-----HHHHHHHHhcccCCCCceeE
Q 012353 52 DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVID---------------KSKS-----IKTFLMQIFEKFGNTDIEGV 111 (465)
Q Consensus 52 d~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~---------------~~ps-----~a~~l~~~LGl~g~~~~~~~ 111 (465)
...-|++.++..++.+. .++|.+|++|..++- .+|. +=..+...+.+.-.......
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~~~~t 108 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNTGPNT 108 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCCCceE
Confidence 38899999999998652 467899999877642 2341 11122333333111334556
Q ss_pred eecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc---cccCCC-CCcccccceeeeeecCCCC
Q 012353 112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA---VYAEGP-ARPTGGAAAVVMLVGPDAP 174 (465)
Q Consensus 112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~---~y~~~~-~~~t~GdGA~A~Ll~~~~~ 174 (465)
-+..+=.++-.||.-|..+++.| . +.||||+.|-. .|.... .+.....-|+|++|++...
T Consensus 109 al~a~~~sf~~aLleA~~~l~~~-~--~~VLlv~~De~~p~~y~~~~~~~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 109 ALAAGEDSFEAALLEAAAQLAEG-A--EPVLLVCYDEPLPEPYQEFRPERDPPFPYALALVLSPGDS 172 (218)
T ss_pred EEecCcchHHHHHHHHHHHHHcC-C--CCEEEEEeCCCCChhhhhcccccCCCcCEEEEEEecCCCC
Confidence 66777789999999999999998 5 89999999986 233322 2344466789999998764
No 134
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=95.84 E-value=0.013 Score=55.94 Aligned_cols=98 Identities=13% Similarity=0.137 Sum_probs=76.9
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcc-cC-CCCceeEeecCcChhHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK-FG-NTDIEGVDSTNACYGGTAALFNC 127 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl-~g-~~~~~~~di~~aC~gg~~AL~~A 127 (465)
+-+..+|.+.|++.+|+.+++.++.+|.+|++..-. +.+.+.||.+..|| .| +.+.+++.|+-=|.+|..++-++
T Consensus 25 g~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~a---SSsDgIYl~RHvGL~~GvP~e~pALtiNRLCGSGFQsiVNg 101 (396)
T KOG1391|consen 25 GLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLA---SSSDGIYLARHVGLRVGVPKETPALTINRLCGSGFQSIVNG 101 (396)
T ss_pred CcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeee---ccCCceEeeeccccccCCcCccCceeehhhhcccHHHHHhh
Confidence 456789999999999999999999999999875421 22334567777776 11 34677889999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEEecccccc
Q 012353 128 VNWVESSSWDGRYGLVVCTDSAVYA 152 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~~y~ 152 (465)
+.-|.-|.. +-||.-++|.++-.
T Consensus 102 aQ~I~vgea--~ivL~GGtEnMSq~ 124 (396)
T KOG1391|consen 102 AQEICVGEA--EIVLCGGTENMSQA 124 (396)
T ss_pred HHHhhcCcc--eEEEecCccccccC
Confidence 999999865 77777777777443
No 135
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=95.15 E-value=0.016 Score=56.00 Aligned_cols=84 Identities=17% Similarity=0.135 Sum_probs=69.0
Q ss_pred CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHH
Q 012353 51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNW 130 (465)
Q Consensus 51 Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~ 130 (465)
--+.+|+.+|...+|++..++.+.||.||+||.-..-....++-.-+-.-|. +..+++..+..+|-+.-.|+-+...+
T Consensus 64 lmphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agf--sdktpahtvtmacissn~amttgmgl 141 (465)
T KOG1392|consen 64 LMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGF--SDKTPAHTVTMACISSNVAMTTGMGL 141 (465)
T ss_pred hchhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCC--CCCCccceeeeehhccchhhhcccee
Confidence 3468999999999999999999999999999976655443455444444565 56788888999999999999999999
Q ss_pred HHcCCC
Q 012353 131 VESSSW 136 (465)
Q Consensus 131 l~sg~~ 136 (465)
|++|.+
T Consensus 142 iatg~~ 147 (465)
T KOG1392|consen 142 IATGNA 147 (465)
T ss_pred EeeCCc
Confidence 999976
No 136
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=94.82 E-value=0.57 Score=53.69 Aligned_cols=179 Identities=17% Similarity=0.237 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCccE----EEEE---eecCCCC--cc------cHHHHHHHHhcccCCCCceeEe-----
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQIGR----LEVG---SETVIDK--SK------SIKTFLMQIFEKFGNTDIEGVD----- 112 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~Id~----li~~---T~s~~~~--~p------s~a~~l~~~LGl~g~~~~~~~d----- 112 (465)
-+-|-.+|...++-++||+|.++.. +.++ ++|.... .| +....+-..+- |+=..+||
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfa---NRiSytFDfqGPS 163 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFA---NRISYTFDFQGPS 163 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhh---cceeEEEeccCCc
Confidence 5789999999999999999987652 2222 2222111 11 11112222332 22223444
Q ss_pred --ecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc-------cc-------cCCCCC--------cccccceeeee
Q 012353 113 --STNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-------VY-------AEGPAR--------PTGGAAAVVML 168 (465)
Q Consensus 113 --i~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-------~y-------~~~~~~--------~t~GdGA~A~L 168 (465)
+..+|++.+.||+.|.+-+++|++ ..+||-+.... .| .+++.+ .--.||.+|+|
T Consensus 164 ~s~DtacsSsl~al~~a~~~~r~gqc--d~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avl 241 (2376)
T KOG1202|consen 164 FSVDTACSSSLMALQNAFQDIRSGQC--DAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVL 241 (2376)
T ss_pred hhhhhhhHHHHHHHHHHHHhhhccCC--chhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEEE
Confidence 446999999999999999999988 88988887764 11 122211 12478999999
Q ss_pred ecCCCCc-ccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeecc
Q 012353 169 VGPDAPV-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFH 247 (465)
Q Consensus 169 l~~~~~~-~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H 247 (465)
|.+.... .+-..+.... .+ -|-++.. +-.|| +|+... .-+++.|.+ .|+.++++-|+=.|
T Consensus 242 lqrk~~ArRvYAtilnar-tN-TDGfKEq-GvTfP--~G~~Q~----qLi~e~Yse----------~Gl~P~sv~YvEAH 302 (2376)
T KOG1202|consen 242 LQRKSLARRVYATILNAR-TN-TDGFKEQ-GVTFP--SGDMQE----QLIRETYSE----------AGLNPESVVYVEAH 302 (2376)
T ss_pred EehhHHHHHHHHHhhccc-cC-CCchhhc-CccCC--CcHHHH----HHHHHHHHh----------cCCCcccEEEEEec
Confidence 9887431 1100010000 11 2334443 45566 465431 234444433 38999999999999
Q ss_pred CCchHHHH
Q 012353 248 SPYNKLVQ 255 (465)
Q Consensus 248 ~p~~km~~ 255 (465)
..++|..+
T Consensus 303 GtGTkVGD 310 (2376)
T KOG1202|consen 303 GTGTKVGD 310 (2376)
T ss_pred cCCCCCCC
Confidence 98887654
No 137
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=94.13 E-value=0.11 Score=41.80 Aligned_cols=72 Identities=15% Similarity=0.098 Sum_probs=40.9
Q ss_pred HHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec----CcChhHHHHHHHHHHHHHcCC-CCCC
Q 012353 65 LEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST----NACYGGTAALFNCVNWVESSS-WDGR 139 (465)
Q Consensus 65 L~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~----~aC~gg~~AL~~A~~~l~sg~-~~~~ 139 (465)
|+++|++++|||.+++...+ +.....+.+.||+ ++.....++. .+|++-..+| ...++.+. .||+
T Consensus 1 L~~~g~~~~did~~i~hq~~-----~~~~~~~~~~lgi--~~~~~~~~~~~~Gn~~sa~~~~~L---~~~~~~g~~~~Gd 70 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQAS-----KKILDSIAKRLGI--PPERFPDNLAEYGNTGSASIPINL---ADALEEGRIKPGD 70 (90)
T ss_dssp HHHTT--GGGESEEEE-SSS-----HHHHHHHHHHHTS---GGGBE-THHHH-B-GGGHHHHHH---HHHHHTTSSCTTE
T ss_pred CccccCCHHHCCEEEeCCCC-----HHHHHHHHHHcCC--cHHHHHHHHhccCcchhhhHHHHH---HHHHHcCCCCCCC
Confidence 68999999999999985533 3344458889997 4332222332 2333333344 34455442 2778
Q ss_pred EEEEEEe
Q 012353 140 YGLVVCT 146 (465)
Q Consensus 140 ~aLVVas 146 (465)
++|+++.
T Consensus 71 ~vl~~~~ 77 (90)
T PF08541_consen 71 RVLLVGF 77 (90)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999884
No 138
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=94.02 E-value=0.14 Score=53.39 Aligned_cols=87 Identities=15% Similarity=0.179 Sum_probs=56.3
Q ss_pred HHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHH
Q 012353 220 CYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLE 299 (465)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~ 299 (465)
+.++++++. |++++|||++-+|++|..+.....+.+ +++.+++..+
T Consensus 320 Ai~~aL~~A------Gl~~~DID~~ei~eaFa~~~l~~~~~l------------------------g~~~~~vN~~---- 365 (417)
T PRK06025 320 AAKKVLAKA------GLTKDDIDLWEINEAFAVVAEKFIRDL------------------------DLDRDKVNVN---- 365 (417)
T ss_pred HHHHHHHHc------CCCHHHCcEEEEchHHHHHHHHHHHHc------------------------CCChhhcccc----
Confidence 445555554 799999999999999998888777776 4443322111
Q ss_pred HHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEec
Q 012353 300 KVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYG 358 (465)
Q Consensus 300 k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syG 358 (465)
--.+.+.+-+|+++...+...+..+.++ + .+.| .+.+++.|
T Consensus 366 ---------------GG~ia~GHp~GaTGa~~v~~ll~qL~~~-g-~~~G-l~~~c~~G 406 (417)
T PRK06025 366 ---------------GGAIALGHPIGATGSILIGTVLDELERR-G-LKRG-LVTMCAAG 406 (417)
T ss_pred ---------------CCHHhcCCchhHHHHHHHHHHHHHHHHh-C-CCeE-EEEEEeec
Confidence 0112234678888988888888888765 3 3445 34444443
No 139
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=93.32 E-value=0.2 Score=49.22 Aligned_cols=95 Identities=15% Similarity=0.225 Sum_probs=75.7
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHh-cccCCCCceeEeecCcChhHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIF-EKFGNTDIEGVDSTNACYGGTAALFNCV 128 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~L-Gl~g~~~~~~~di~~aC~gg~~AL~~A~ 128 (465)
+...-+|-..+.+..+++.+++|+.|+-|+++|...+-.. ...+.++..+ |+ +..++..-++--|++|+.|+...+
T Consensus 58 dt~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~g-a~e~R~a~~~ag~--P~tvpv~tvNRqCsSGLqaVadiA 134 (435)
T KOG1389|consen 58 DTRPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSG-ASECRMAAFYAGF--PETVPVRTVNRQCSSGLQAVADIA 134 (435)
T ss_pred cCChHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcc-hHHHHHHHHHcCC--CcccchhhhhhhhhhHHHHHHHHH
Confidence 3445688888899999999999999999999998876533 5666666655 44 445666667789999999999999
Q ss_pred HHHHcCCCCCCEEEEEEeccc
Q 012353 129 NWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 129 ~~l~sg~~~~~~aLVVasD~~ 149 (465)
.-|++|.+ +-.|-.+.|.+
T Consensus 135 ~~Ir~G~y--dIGla~GvESM 153 (435)
T KOG1389|consen 135 AKIRAGFY--DIGLAAGVESM 153 (435)
T ss_pred HHHhcCce--eeecccchhhh
Confidence 99999988 77777777766
No 140
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=92.11 E-value=0.5 Score=48.17 Aligned_cols=90 Identities=9% Similarity=-0.050 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEE-EeecCCCCcccHHHHHHHHhcccCCCCceeEeec---CcChhHHHHHHH--HHHH
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEV-GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST---NACYGGTAALFN--CVNW 130 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~-~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~---~aC~gg~~AL~~--A~~~ 130 (465)
..+|.+++|+++|++|++||.|+. +|.+.. .....+..+.+.+|.. ....+....+ .-|-+...++.+ +...
T Consensus 236 l~~ai~~AL~~agl~~~dId~v~ah~~gt~~-~d~~e~~A~~~~f~~~-~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~ 313 (348)
T PRK06147 236 LTQAIRAALAEAGCGLEDMDYRIADLNGEQY-RFKEAALAEMRLFRVR-KEFFDLWHPAECIGEIGAAIGPALLGVALAA 313 (348)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEcCCCCCcc-chHHHHHHHHHHhhhc-cCCCceecchHhhcchHHHHHHHHHHHHHHH
Confidence 457899999999999999999884 344432 2334455567777631 1122222222 234444444444 4455
Q ss_pred HHcCCCCCCEEEEEEecc
Q 012353 131 VESSSWDGRYGLVVCTDS 148 (465)
Q Consensus 131 l~sg~~~~~~aLVVasD~ 148 (465)
++.|..|+.++||.+++-
T Consensus 314 ~~~g~~~g~~~L~~s~~d 331 (348)
T PRK06147 314 SRKGYGPGPNVLCHLSDD 331 (348)
T ss_pred HHcCcCCCCcEEEEecCC
Confidence 667777889999999764
No 141
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=91.78 E-value=0.68 Score=47.13 Aligned_cols=95 Identities=16% Similarity=0.147 Sum_probs=63.5
Q ss_pred CHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCC-Cce-eE---eecC-cChhHHHHHH
Q 012353 52 DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIE-GV---DSTN-ACYGGTAALF 125 (465)
Q Consensus 52 d~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~-~~~-~~---di~~-aC~gg~~AL~ 125 (465)
.....+..+++++|+++|++++|||.+++...++ ..-..+.+.||+ .+ .+. .+ +++| ++++-..+|.
T Consensus 205 ~~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~-----~~~~~~~~~lgl--~~ek~~~~~~~~~~GNt~sAsipl~L~ 277 (345)
T TIGR00748 205 AYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNG-----KFYLVAARMLGF--PKEQVKPGLLTPRIGNTYSGATPVGLS 277 (345)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCCh-----HHHHHHHHHcCC--CHHHeeccccccccCchhhhHHHHHHH
Confidence 4677788999999999999999999999754332 233457888997 32 222 11 4443 6666666776
Q ss_pred HHHHHHHcCCCCCCEEEEEEeccccccCCCCCcccccce--eeeeecC
Q 012353 126 NCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAA--VVMLVGP 171 (465)
Q Consensus 126 ~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGA--~A~Ll~~ 171 (465)
.+...++ +|+++|+++ ||.|. .++++.-
T Consensus 278 ~~~~~~~----~Gd~vll~~--------------~G~G~s~~~~~~~~ 307 (345)
T TIGR00748 278 AVLDIAE----PGDRILAVS--------------YGSGAGSDAFSIVV 307 (345)
T ss_pred HHHHhcC----CCCEEEEEE--------------ecCCcceeEEEEEE
Confidence 6654322 678898887 67666 5666543
No 142
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=91.42 E-value=0.81 Score=47.47 Aligned_cols=27 Identities=15% Similarity=0.130 Sum_probs=22.9
Q ss_pred CCCCCCCceeeccCCchHHHHHHHHHh
Q 012353 235 QFSLSNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 235 ~~~~~did~~~~H~p~~km~~~~~~~L 261 (465)
|++++|||++-.|-.|.-......+.|
T Consensus 305 gl~~~dId~~e~~d~f~~~~~~~~e~l 331 (393)
T PRK05656 305 GWSLAELDLIEANEAFAAQSLAVGKEL 331 (393)
T ss_pred CCCHHHCCEEEecCccHHHHHHHHHHh
Confidence 799999999999999887776666666
No 143
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=90.89 E-value=1.5 Score=45.33 Aligned_cols=98 Identities=17% Similarity=0.191 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhccc-C--CCC--ceeEeecCcChhHHHHHHHHH
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKF-G--NTD--IEGVDSTNACYGGTAALFNCV 128 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~-g--~~~--~~~~di~~aC~gg~~AL~~A~ 128 (465)
..-...|++++|+++|++++|||.+.+. |..+...-...+.||+. . |++ ..++-.-.+|+|....+..+.
T Consensus 284 ~~~~~~a~~~al~~agl~~~did~~ei~-----d~F~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~ 358 (387)
T PRK07850 284 LDGPVQATAKVLEKAGMKIGDIDLVEIN-----EAFASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALH 358 (387)
T ss_pred cchHHHHHHHHHHHcCCCHHHcCeeeec-----ccchHHHHHHHHHcCCCCCCcCCCCchhhcCCCcchhHHHHHHHHHH
Confidence 3445789999999999999999999973 22222233344677741 0 111 111111134444444444444
Q ss_pred HHHHcCCCCCCEEEEEEeccccccCCCCCcccccceeeeeecC
Q 012353 129 NWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP 171 (465)
Q Consensus 129 ~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGA~A~Ll~~ 171 (465)
.+ +.. .+++.|+..+ ..|..+.||||+.
T Consensus 359 qL-~~~--~~~~g~~~~c------------~~gg~g~a~~~e~ 386 (387)
T PRK07850 359 EL-ERT--DKSTALITMC------------AGGALSTGTIIER 386 (387)
T ss_pred HH-Hhc--CCCeEEEEEc------------cccCceeEEEEEe
Confidence 44 433 3477766532 2456667777764
No 144
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=90.84 E-value=0.76 Score=47.62 Aligned_cols=114 Identities=13% Similarity=0.061 Sum_probs=64.1
Q ss_pred echHHHHHhcCCChh-hhhhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHH
Q 012353 19 VQQEALEAHDGASKG-KYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLM 97 (465)
Q Consensus 19 v~~~~l~~~~g~~~~-k~~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~ 97 (465)
|..++.++..+..|- ++ .|.++.. . +.++.....+.|++++|+++|++++|||.+.+. |......-.-.
T Consensus 253 l~See~A~~l~~~pv~~I-~g~~~~~--~--~~~~~~~~~~~A~~~al~~Agl~~~DiDv~Ei~-----daFa~~~l~~l 322 (388)
T PRK06366 253 MASEKAINEYGLKPIARI-TGYESAS--L--DPLDFVEAPIPATRKLLEKQNKSIDYYDLVEHN-----EAFSIASIIVR 322 (388)
T ss_pred EecHHHHHHcCCCcCEEE-EEEEEEe--c--CHHHhcccHHHHHHHHHHHcCCCHHHcceeecc-----chhHHHHHHHH
Confidence 444555555554443 44 2444332 1 123333445789999999999999999999862 22223334455
Q ss_pred HHhcccC---CCCceeEeec--CcChhHHHHHHHHHHHHHcCCCCCCEEEEEE
Q 012353 98 QIFEKFG---NTDIEGVDST--NACYGGTAALFNCVNWVESSSWDGRYGLVVC 145 (465)
Q Consensus 98 ~~LGl~g---~~~~~~~di~--~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVa 145 (465)
+.||+-+ |++-=.+-.+ -+|+|....+.++..+-..+ +++.|+..
T Consensus 323 e~lgl~g~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~~---~~~g~~~~ 372 (388)
T PRK06366 323 DQLKIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALKTRH---MKTGLATL 372 (388)
T ss_pred HHhCCCCCccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhcC---CCeEEEEE
Confidence 6677521 1111122223 37777777777777765543 36666543
No 145
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=90.44 E-value=1.4 Score=45.53 Aligned_cols=27 Identities=11% Similarity=0.272 Sum_probs=22.2
Q ss_pred CCCCCCCceeeccCCchHHHHHHHHHh
Q 012353 235 QFSLSNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 235 ~~~~~did~~~~H~p~~km~~~~~~~L 261 (465)
|++++|||++-.|-+|.-+.....+.|
T Consensus 299 gi~~~did~~e~~d~f~~~~~~~~e~l 325 (386)
T cd00751 299 GLTLDDIDLIEINEAFAAQALACLKEL 325 (386)
T ss_pred CCCHHHcCEEEeechhHHHHHHHHHHh
Confidence 789999999999999987666655555
No 146
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=90.32 E-value=1.4 Score=45.78 Aligned_cols=93 Identities=15% Similarity=0.196 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecC---------cChhHHHHHHHH
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTN---------ACYGGTAALFNC 127 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~---------aC~gg~~AL~~A 127 (465)
...|++++|+++|++|+|||.+.+ .|......-...+.||+. ..-..+..+. +++|...-+..+
T Consensus 298 ~~~A~~~al~~AGl~~~DID~iei-----~dafa~~~l~~~e~lg~~--~~~~pvN~~GG~la~GHp~gasG~~~v~e~~ 370 (400)
T PRK13359 298 PAPATQKLLARLGMTLDQFDVIEL-----NEAFASQGLAVLRELGLA--DDDARVNPNGGAIALGHPLGASGARLVTTAL 370 (400)
T ss_pred HHHHHHHHHHHhCCCHHHcCcCcc-----CcHhHHHHHHHHHHcCCC--CCCCCEECCCchhhcCCchhHHHHHHHHHHH
Confidence 368999999999999999999983 222223334456778762 1112233322 333444334444
Q ss_pred HHHHHcCCCCCCEEEEEEeccccccCCCCCcccccceeeeeecC
Q 012353 128 VNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP 171 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGA~A~Ll~~ 171 (465)
..+ +.. ++++.|+..+ ..|..+.||||++
T Consensus 371 ~qL-~~~--~~~~g~~~~c------------~~gG~g~a~~ie~ 399 (400)
T PRK13359 371 YQL-ERT--GGRFALCTMC------------IGVGQGIAIAIER 399 (400)
T ss_pred HHH-hhc--CCCeEEEEEc------------ccCCceeEEEEEe
Confidence 443 333 3567666442 2455667777764
No 147
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=89.77 E-value=1.1 Score=46.53 Aligned_cols=41 Identities=12% Similarity=0.149 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcc
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
...|++++|+++|++|+|||.+.+ .|..+...-...+.||+
T Consensus 298 ~~~a~~~al~~Agl~~~DID~~ei-----~D~f~~~~l~~~e~lG~ 338 (400)
T TIGR02430 298 PVPATQKLLARAGLSIDQFDVIEL-----NEAFAAQALAVLRELGL 338 (400)
T ss_pred HHHHHHHHHHHhCCCHHHCCCccc-----CcHHHHHHHHHHHHcCC
Confidence 358899999999999999999983 23233334456677886
No 148
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=89.76 E-value=1.1 Score=46.60 Aligned_cols=41 Identities=10% Similarity=0.131 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcc
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
...|++++|+++|++|+|||.+.+. |......-...+.||+
T Consensus 300 ~~~a~~~al~~Agl~~~Did~~ei~-----d~f~~~~l~~~e~lg~ 340 (404)
T PRK06205 300 PVPATEKALARAGLTLDDIDLIELN-----EAFAAQVLAVLKEWGF 340 (404)
T ss_pred HHHHHHHHHHHcCCCHHHCCEeeec-----cHHHHHHHHHHHHhCc
Confidence 4689999999999999999999852 2222223334566775
No 149
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=89.56 E-value=2 Score=36.97 Aligned_cols=96 Identities=17% Similarity=0.217 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccC---CCCceeEeec--CcChhHHHHHHHHHHH
Q 012353 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG---NTDIEGVDST--NACYGGTAALFNCVNW 130 (465)
Q Consensus 56 la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g---~~~~~~~di~--~aC~gg~~AL~~A~~~ 130 (465)
=.+.|++++|+++|++++|||.+.+.- ..-...-...+.||+.. |++-=.+-+. .+|+|...-+..+..+
T Consensus 23 ~p~~A~~~al~~ag~~~~did~~Ei~E-----aFA~~~l~~~~~lg~~~~~vN~~GG~la~GHP~gasG~r~~~~l~~~L 97 (123)
T PF02803_consen 23 GPVPAARKALERAGLTPDDIDVIEINE-----AFAAQVLAFLEALGLDPEKVNPNGGALALGHPLGASGARLVVELAHQL 97 (123)
T ss_dssp THHHHHHHHHHHHT--GGGESEEEE-------SBHHHHHHHHHHHTTGGGGBSTT--HHHH-BHTTTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCccccchhhccc-----hhhhHHHHhhccccccccccCcccccccccccccccccchhhhhHHHH
Confidence 345799999999999999999998732 12233445677787610 1111122222 4777777777777776
Q ss_pred HHcCCCCCCEEEEEEeccccccCCCCCcccccceeeeeecC
Q 012353 131 VESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP 171 (465)
Q Consensus 131 l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGA~A~Ll~~ 171 (465)
-..+ +++.|+-.+ ..|..+.|+||++
T Consensus 98 ~~~~---~~~gla~~~------------~ggG~g~a~ller 123 (123)
T PF02803_consen 98 RRRG---GRYGLAAIC------------AGGGQGSAVLLER 123 (123)
T ss_dssp HHHT---TSEEEEEEE------------ETTTEEEEEEEEE
T ss_pred HHhc---hhhhhHHhc------------ccceeeEEEEEEC
Confidence 5544 366665442 2456667777753
No 150
>PLN02287 3-ketoacyl-CoA thiolase
Probab=89.34 E-value=1.9 Score=45.70 Aligned_cols=27 Identities=15% Similarity=0.310 Sum_probs=22.6
Q ss_pred CCCCCCCceeeccCCchHHHHHHHHHh
Q 012353 235 QFSLSNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 235 ~~~~~did~~~~H~p~~km~~~~~~~L 261 (465)
|++++|||++=+|-+|.-+.-..++.|
T Consensus 345 gl~~~DID~~Ei~daFa~~~l~~~e~l 371 (452)
T PLN02287 345 GLELDDIDLFEINEAFASQFVYCCKKL 371 (452)
T ss_pred CCCHHHCCEEEecchHHHHHHHHHHHc
Confidence 799999999999999887766666666
No 151
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=88.48 E-value=3.2 Score=43.08 Aligned_cols=27 Identities=4% Similarity=0.180 Sum_probs=24.3
Q ss_pred CCCCCCCceeeccCCchHHHHHHHHHh
Q 012353 235 QFSLSNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 235 ~~~~~did~~~~H~p~~km~~~~~~~L 261 (465)
|++++|||.+=+|-+|.-......+.|
T Consensus 302 gl~~~Did~~Ei~d~Fa~~~l~~~e~l 328 (390)
T PRK06504 302 GMKIDDIDLYEVNEAFASVPLAWLKAT 328 (390)
T ss_pred CCCHHHCCEEEecccchHHHHHHHHHh
Confidence 799999999999999998888777777
No 152
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=88.42 E-value=2.2 Score=44.41 Aligned_cols=41 Identities=12% Similarity=0.138 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcc
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
...|++++|+++|++++|||.+.+ .|......-...+.||+
T Consensus 299 ~~~a~~~al~~Agl~~~DId~~ei-----~D~f~~~~l~~~e~lg~ 339 (401)
T PRK09050 299 PAPATRKLLARLGLTIDQFDVIEL-----NEAFAAQGLAVLRQLGL 339 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCcccc-----CcHhHHHHHHHHHHcCC
Confidence 357999999999999999999984 22222333445677886
No 153
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=87.90 E-value=4.2 Score=41.97 Aligned_cols=38 Identities=5% Similarity=0.038 Sum_probs=30.1
Q ss_pred HHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhh
Q 012353 219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLL 262 (465)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~ 262 (465)
.+.+..+++. |++++|||++-+|-+|+.+...+.+.|.
T Consensus 261 ~a~~~al~~A------gi~~~DiD~~ei~d~ft~~~l~~le~lG 298 (385)
T PRK12578 261 LAARQAYNMA------KVTPNDIEVATVHDAFTIAEIMGYEDLG 298 (385)
T ss_pred HHHHHHHHHc------CCCHHHCCEEEecCcChHHHHHHHHHcC
Confidence 3444444444 7899999999999999999888888884
No 154
>PRK09051 beta-ketothiolase; Provisional
Probab=86.95 E-value=2.8 Score=43.51 Aligned_cols=41 Identities=10% Similarity=0.122 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcc
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
...|++++|+++|++++|||.+.+. +......-...+.||+
T Consensus 294 ~~~a~~~al~~agi~~~did~~ei~-----d~f~~~~~~~~e~lg~ 334 (394)
T PRK09051 294 PVPATQKALERAGLTVADLDVIEAN-----EAFAAQACAVTRELGL 334 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec-----CccHHHHHHHHHHhCC
Confidence 3688999999999999999999872 2222334455677886
No 155
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=86.51 E-value=4.2 Score=42.70 Aligned_cols=27 Identities=7% Similarity=0.231 Sum_probs=23.3
Q ss_pred CCCCCCCceeeccCCchHHHHHHHHHh
Q 012353 235 QFSLSNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 235 ~~~~~did~~~~H~p~~km~~~~~~~L 261 (465)
|++++|||.+-.|-+|.-+.-..++.|
T Consensus 323 Gl~~~DiD~~Ei~d~Fa~~~l~~~e~l 349 (428)
T PRK08963 323 GLTLADLTLIDMHEAFAAQTLANLQMF 349 (428)
T ss_pred CCCHHHCCEEEEccccHHHHHHHHHHh
Confidence 799999999999999998777766665
No 156
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=86.02 E-value=5.5 Score=41.22 Aligned_cols=38 Identities=5% Similarity=0.110 Sum_probs=29.7
Q ss_pred HHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhh
Q 012353 219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLL 262 (465)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~ 262 (465)
.+.+..+++. |++++|||.+-.|-+|+-+..-..+.|.
T Consensus 264 ~a~~~a~~~a------gl~~~did~~e~~d~f~~~~~~~~e~lg 301 (389)
T PRK07516 264 RAWQRALAQA------GVTLDDLSFVETHDCFTIAELIEYEAMG 301 (389)
T ss_pred HHHHHHHHHc------CCCHHHCCEEEEecCCCHHHHHHHHHcC
Confidence 3444454544 7899999999999999998888888774
No 157
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=85.84 E-value=3.9 Score=42.14 Aligned_cols=79 Identities=14% Similarity=0.019 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec--C--cChhHHHHHHHHHHHHH
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST--N--ACYGGTAALFNCVNWVE 132 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~--~--aC~gg~~AL~~A~~~l~ 132 (465)
...+++++|+++|++++|||.+++..-+ +.+-..+++.||+ ..+-....+. . ++++-..+|. .+++
T Consensus 282 ~~~~i~~~L~~~gl~~~dId~~v~Hq~n-----~~~~~~~~~~Lgl--~~ek~~~~l~~~GNt~sAsi~~~L~---~~~~ 351 (379)
T PLN02326 282 VPQVIESALQKAGLTAESIDWLLLHQAN-----QRIIDAVAQRLGI--PPEKVISNLANYGNTSAASIPLALD---EAVR 351 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCCC-----HHHHHHHHHHcCC--CHHHeeecHhhcCcHHHHHHHHHHH---HHHH
Confidence 4456788899999999999998874432 2333458999998 4332222332 2 3333333333 3345
Q ss_pred cCC-CCCCEEEEEE
Q 012353 133 SSS-WDGRYGLVVC 145 (465)
Q Consensus 133 sg~-~~~~~aLVVa 145 (465)
.+. .+|+++|+++
T Consensus 352 ~g~~~~Gd~vll~~ 365 (379)
T PLN02326 352 SGKVKKGDVIATAG 365 (379)
T ss_pred cCCCCCCCEEEEEE
Confidence 543 2778898887
No 158
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=85.58 E-value=3.3 Score=41.61 Aligned_cols=81 Identities=6% Similarity=-0.036 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec--CcChhHHHHHHHHHHHHHcC
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST--NACYGGTAALFNCVNWVESS 134 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~--~aC~gg~~AL~~A~~~l~sg 134 (465)
...+.+++|+++|++++|||.+++...+. ..-..+++.||+ +.......+. ..|++...-+.++ .+++++
T Consensus 232 ~~~~i~~~L~~~gl~~~did~~~~H~~~~-----~~~~~i~~~l~l--~~e~~~~~~~~~Gn~~sas~~~~L~-~~~~~g 303 (329)
T PRK07204 232 LMKFIDKLLMDAGYTLADIDLIVPHQASG-----PAMRLIRKKLGV--DEERFVTIFEDHGNMIAASIPVALF-EAIKQK 303 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCCCCH-----HHHHHHHHHcCC--CHHHhhhhHhhhCcHHHHHHHHHHH-HHHHcC
Confidence 44778899999999999999998744332 234578999997 3322221221 2333333323332 345555
Q ss_pred C-CCCCEEEEEE
Q 012353 135 S-WDGRYGLVVC 145 (465)
Q Consensus 135 ~-~~~~~aLVVa 145 (465)
. .+|+++|+++
T Consensus 304 ~~~~Gd~vll~~ 315 (329)
T PRK07204 304 KVQRGNKILLLG 315 (329)
T ss_pred CCCCCCEEEEEE
Confidence 3 3778888887
No 159
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=84.98 E-value=3.4 Score=41.26 Aligned_cols=79 Identities=16% Similarity=0.014 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEee---cC-cChhHHHHHHHHHHHHH
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS---TN-ACYGGTAALFNCVNWVE 132 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di---~~-aC~gg~~AL~~A~~~l~ 132 (465)
..++.+++|+++|++++|||.+++..- .+..-..+++.||+ +..-....+ +| +|++...+| ..+++
T Consensus 227 ~~~~i~~~L~~~g~~~~did~~~~h~~-----~~~~~~~~~~~lg~--~~~~~~~~~~~~Gn~~sas~~~~L---~~~~~ 296 (325)
T PRK12879 227 MPKGARQVLEKAGLTKDDIDWVIPHQA-----NLRIIESLCEKLGI--PMEKTLVSVEYYGNTSAATIPLAL---DLALE 296 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHcCC--CHHHhhhhHhhhCchHHHHHHHHH---HHHHH
Confidence 346788999999999999999997532 33445678999997 322111122 22 222333333 34456
Q ss_pred cCC-CCCCEEEEEE
Q 012353 133 SSS-WDGRYGLVVC 145 (465)
Q Consensus 133 sg~-~~~~~aLVVa 145 (465)
.+. .+|+++|+++
T Consensus 297 ~g~~~~Gd~vll~~ 310 (325)
T PRK12879 297 QGKIKPGDTLLLYG 310 (325)
T ss_pred cCCCCCCCEEEEEE
Confidence 653 2778998887
No 160
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=84.77 E-value=3.5 Score=41.45 Aligned_cols=82 Identities=6% Similarity=0.010 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec-CcChhHHHHHHHHHHHHHcCC
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFNCVNWVESSS 135 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~aC~gg~~AL~~A~~~l~sg~ 135 (465)
...+.+++|+++|++++|||.+++..-+ +..-..+.+.||+ +..-....+. .|-.+...-+..-..+++.+.
T Consensus 228 ~~~~i~~~L~~~g~~~~did~~~~hq~~-----~~~~~~~~~~lgl--~~~k~~~~l~~~Gn~~sasi~~~L~~~~~~g~ 300 (326)
T CHL00203 228 VPAVIIKCLNALNISIDEVDWFILHQAN-----KRILEAIANRLSV--PNSKMITNLEKYGNTSAASIPLALDEAIQNNK 300 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCCC-----HHHHHHHHHHhCC--CHHHhhhHHHhhCcHHHHHHHHHHHHHHHhCC
Confidence 4456889999999999999999874433 3344568999998 3222122232 222222222222223345543
Q ss_pred -CCCCEEEEEE
Q 012353 136 -WDGRYGLVVC 145 (465)
Q Consensus 136 -~~~~~aLVVa 145 (465)
.+|+++|+++
T Consensus 301 ~~~Gd~vll~~ 311 (326)
T CHL00203 301 IQPGQIIVLSG 311 (326)
T ss_pred CCCCCEEEEEE
Confidence 3788898887
No 161
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=84.52 E-value=1.2 Score=37.74 Aligned_cols=77 Identities=16% Similarity=0.214 Sum_probs=47.1
Q ss_pred HHHHHHHHHHCCCCcCCccEEEE-EeecCCCCcccHHHHHHHHhcccC-CCCceeEeec-----CcChhHHHHHHHHHHH
Q 012353 58 LTAVTNLLEKYKIDPKQIGRLEV-GSETVIDKSKSIKTFLMQIFEKFG-NTDIEGVDST-----NACYGGTAALFNCVNW 130 (465)
Q Consensus 58 ~~Aa~~aL~~agi~~~~Id~li~-~T~s~~~~~ps~a~~l~~~LGl~g-~~~~~~~di~-----~aC~gg~~AL~~A~~~ 130 (465)
.++.+++|++++++|++||.|.. +|.++. ..+.-+..+.+.|+-.. ...+..-.++ ....+|+..|..+.-.
T Consensus 28 ~~~i~~al~~agi~~~~I~~i~~hg~Gt~~-~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~ 106 (119)
T PF02801_consen 28 ARAIRRALADAGISPEDIDYIEAHGTGTPL-GDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALLA 106 (119)
T ss_dssp HHHHHHHHHHHTS-GGGEEEEE----SSHH-HHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccccccceeeeeecccccc-chhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHHH
Confidence 67799999999999999999984 444432 23456667888887411 0124433333 2456667777777777
Q ss_pred HHcCC
Q 012353 131 VESSS 135 (465)
Q Consensus 131 l~sg~ 135 (465)
++.+.
T Consensus 107 l~~~~ 111 (119)
T PF02801_consen 107 LEHGT 111 (119)
T ss_dssp HHHTE
T ss_pred HhcCC
Confidence 76653
No 162
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=84.22 E-value=6.1 Score=40.53 Aligned_cols=95 Identities=14% Similarity=0.183 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCC-c------eeEeecCcChhHHHHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTD-I------EGVDSTNACYGGTAALFNC 127 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~-~------~~~di~~aC~gg~~AL~~A 127 (465)
.-...|++++|+++|++++|||.+.+. +......-...+.||+ ... + .++-.-.|+.|........
T Consensus 258 ~~~~~a~~~al~~Agl~~~Did~~ei~-----eafa~~~~~~~e~lgl--~~~~vn~~GG~la~Ghp~GatG~~~~~~~~ 330 (361)
T PRK06690 258 TGPIFAVNKLLNEMNMKVEDIDYFEIN-----EAFASKVVACAKELQI--PYEKLNVNGGAIALGHPYGASGAMLVTRLF 330 (361)
T ss_pred hHHHHHHHHHHHHcCCCHHHcCEeeec-----chhHHHHHHHHHhcCC--CchhcccCCcHHhccCchhhhHHHHHHHHH
Confidence 345679999999999999999999762 2222334445677776 211 0 0111123666666666666
Q ss_pred HHHHHcCCCCCCEEEEEEeccccccCCCCCcccccceeeeeecC
Q 012353 128 VNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP 171 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGA~A~Ll~~ 171 (465)
..+-+.+ +++.|+..+ ..|-.++|+||++
T Consensus 331 ~ql~~~~---~~~g~~~~c------------~~gG~g~a~~~e~ 359 (361)
T PRK06690 331 YQAKRED---MKYGIATLG------------IGGGIGLALLFEK 359 (361)
T ss_pred HHHHHhC---CCEEEEEEc------------ccCcceeEEEEEe
Confidence 5554433 366655431 2344567777764
No 163
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=84.19 E-value=6.6 Score=40.42 Aligned_cols=87 Identities=11% Similarity=0.132 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHh-----cccCCCCce-eE-eec-CcChhHHHHHH
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIF-----EKFGNTDIE-GV-DST-NACYGGTAALF 125 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~L-----Gl~g~~~~~-~~-di~-~aC~gg~~AL~ 125 (465)
......+.+++|+++|+.++|||.++...-+ +..--.+.++| |+. ..++. .+ +++ .+|++...+|.
T Consensus 271 ~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n-----~~~~~~v~~~l~~~~~gl~-~~k~~~~~~~~GNt~sAsipi~L~ 344 (378)
T PRK06816 271 VVYTIKPLLELVDKRNLDPDDIDYFLPHYSS-----EYFREKIVELLAKAGFMIP-EEKWFTNLATVGNTGSASIYIMLD 344 (378)
T ss_pred HHHHHHHHHHHHHHcCCChhhCCEEeeCccc-----HHHHHHHHHHHHhccCCCC-hhheEEeccccccccchHHHHHHH
Confidence 3455788899999999999999999864332 23334566666 651 12222 22 222 35555555665
Q ss_pred HHHHHHHcCC-CCCCEEEEEEeccc
Q 012353 126 NCVNWVESSS-WDGRYGLVVCTDSA 149 (465)
Q Consensus 126 ~A~~~l~sg~-~~~~~aLVVasD~~ 149 (465)
.+ ++.|. .+|+++++++.+..
T Consensus 345 ~a---~~~g~~~~Gd~vl~~~~~s~ 366 (378)
T PRK06816 345 EL---LNSGRLKPGQKILCFVPESG 366 (378)
T ss_pred HH---HHcCCCCCCCEEEEEEeccc
Confidence 44 44443 37889999887654
No 164
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=83.56 E-value=5 Score=43.01 Aligned_cols=37 Identities=16% Similarity=0.078 Sum_probs=29.8
Q ss_pred HHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhh
Q 012353 220 CYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLL 262 (465)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~ 262 (465)
+.+..+++. |++++|||.+=+|..|+-+....++.|.
T Consensus 297 aa~~a~~~A------Gi~~~Did~~elydcF~~~~~~~~E~LG 333 (498)
T PRK08257 297 AGRRALALA------GLGIDDIDAFDLYSCFPSAVQVAARELG 333 (498)
T ss_pred HHHHHHHHh------CCCHHHCCEEEeccCCHHHHHHHHHHcC
Confidence 444444444 7999999999999999999988888883
No 165
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=82.87 E-value=4.5 Score=40.49 Aligned_cols=84 Identities=14% Similarity=0.060 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec--CcChhHHHHHHHHHHHH
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST--NACYGGTAALFNCVNWV 131 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~--~aC~gg~~AL~~A~~~l 131 (465)
.....++.+++|+++|++++|||.+++..-+ +..-..+.+.||+ +..-....+. ..|++...-+.+ ..++
T Consensus 226 ~~~~~~~~~~~L~~~gl~~~did~~~~h~~~-----~~~~~~~~~~l~l--~~~k~~~~l~~~Gn~~sas~~~~L-~~~~ 297 (326)
T PRK05963 226 VRMMSGASQNVLASAAMTPQDIDRFFPHQAN-----ARIVDKVCETIGI--PRAKAASTLETYGNSSAATIPLSL-SLAN 297 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEeCCCC-----HHHHHHHHHHcCC--CHHHhhhhHHhhCcHHHHHHHHHH-HHHH
Confidence 4445667889999999999999998873322 3445567889997 3322111222 234333333322 2334
Q ss_pred HcCC-CCCCEEEEEE
Q 012353 132 ESSS-WDGRYGLVVC 145 (465)
Q Consensus 132 ~sg~-~~~~~aLVVa 145 (465)
+.+. .+|+++|+++
T Consensus 298 ~~~~~~~Gd~vll~~ 312 (326)
T PRK05963 298 LEQPLREGERLLFAA 312 (326)
T ss_pred HhCCCCCCCEEEEEE
Confidence 4442 3778999888
No 166
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=82.74 E-value=3.7 Score=34.80 Aligned_cols=37 Identities=16% Similarity=0.100 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHH
Q 012353 218 DTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFAR 260 (465)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~ 260 (465)
.+++++.+++. +++++|||++..|....+..+..-..
T Consensus 28 ~~~i~~al~~a------gi~~~~I~~i~~hg~Gt~~~D~~E~~ 64 (119)
T PF02801_consen 28 ARAIRRALADA------GISPEDIDYIEAHGTGTPLGDAAEAE 64 (119)
T ss_dssp HHHHHHHHHHH------TS-GGGEEEEE----SSHHHHHHHHH
T ss_pred HHHHHHHHhhh------ccccccceeeeeeccccccchhhhhh
Confidence 33444444544 78999999999999999987765443
No 167
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=82.52 E-value=5.8 Score=39.90 Aligned_cols=83 Identities=6% Similarity=-0.024 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEee--cCcChhHHHHHHHHHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS--TNACYGGTAALFNCVNWVE 132 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di--~~aC~gg~~AL~~A~~~l~ 132 (465)
....++.+++|+++|++++|||.+++... .+..-..+.+.||+ +..-....+ -..|++...-+.++ .+++
T Consensus 239 ~~~~~~~~~~L~~~g~~~~did~~i~H~~-----~~~~~~~~~~~lgl--~~~k~~~~~~~~GN~~sas~~~~L~-~~~~ 310 (338)
T PRK09258 239 ELAVDTWEAFLAQLGWAVEQVDRVICHQV-----GAAHTRAILKALGI--DPEKVFTTFPTLGNMGPASLPITLA-MAAE 310 (338)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecCCC-----CHHHHHHHHHHhCC--CHHHceehHhhhCCcHHhHHHHHHH-HHHH
Confidence 45556788999999999999999987543 23345578899998 332222222 23444444333333 2345
Q ss_pred cCC-CCCCEEEEEE
Q 012353 133 SSS-WDGRYGLVVC 145 (465)
Q Consensus 133 sg~-~~~~~aLVVa 145 (465)
.+. .+|+++|+++
T Consensus 311 ~g~~~~Gd~vll~~ 324 (338)
T PRK09258 311 EGFLKPGDRVALLG 324 (338)
T ss_pred hCCCCCCCEEEEEE
Confidence 543 2778888887
No 168
>PRK06840 hypothetical protein; Validated
Probab=82.31 E-value=6.1 Score=39.86 Aligned_cols=81 Identities=16% Similarity=0.098 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCC-CceeE-eecCcChhHHHHHHHHHHHHHc
Q 012353 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEGV-DSTNACYGGTAALFNCVNWVES 133 (465)
Q Consensus 56 la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~-~~~~~-di~~aC~gg~~AL~~A~~~l~s 133 (465)
...++.+++|+++|++++|||.++.... .+.+-..+++.||+ .. +...+ ++.| |++. .-+.+-..++++
T Consensus 238 ~~~~~i~~~L~~~gl~~~did~~~~h~~-----~~~~~~~~~~~Lgl--~~~~~~~~~~~Gn-~~sa-s~~~~L~~~~~~ 308 (339)
T PRK06840 238 NFLKVIREALRKSGYTPKDIDYLAILHM-----KRSAHIALLEGLGL--TEEQAIYLDEYGH-LGQL-DQILSLHLALEQ 308 (339)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCc-----CHHHHHHHHHHcCC--CHHHeEeHHhccc-hhhh-hHHHHHHHHHHc
Confidence 3457889999999999999999876432 23334468899997 32 22211 2222 2222 222222344555
Q ss_pred CC-CCCCEEEEEE
Q 012353 134 SS-WDGRYGLVVC 145 (465)
Q Consensus 134 g~-~~~~~aLVVa 145 (465)
+. .+|+++|+++
T Consensus 309 ~~~~~Gd~ill~~ 321 (339)
T PRK06840 309 GKLKDGDLVVLVS 321 (339)
T ss_pred CCCCCCCEEEEEE
Confidence 53 2788898887
No 169
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=81.98 E-value=8.7 Score=39.93 Aligned_cols=38 Identities=11% Similarity=0.064 Sum_probs=30.2
Q ss_pred HHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhh
Q 012353 220 CYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLF 263 (465)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~ 263 (465)
+.+..+++. |++++|||.+-+|-+|.-+.-..++.|.|
T Consensus 281 aa~~a~~~A------gi~~~Didv~el~D~fa~~~l~~le~lGl 318 (403)
T PRK06289 281 AVLDAYRRA------GVGLDDLDGFEVHDCFTPSEYLAIDHIGL 318 (403)
T ss_pred HHHHHHHHc------CCCHHHCeEEeeeccchHHHHHHHHHcCC
Confidence 444444544 79999999999999999998888888843
No 170
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=81.33 E-value=6.7 Score=33.71 Aligned_cols=36 Identities=8% Similarity=0.099 Sum_probs=25.1
Q ss_pred HHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHh
Q 012353 220 CYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L 261 (465)
+.+.++++. +++++|+|.+=+|-+|.-..-...+.|
T Consensus 27 A~~~al~~a------g~~~~did~~Ei~EaFA~~~l~~~~~l 62 (123)
T PF02803_consen 27 AARKALERA------GLTPDDIDVIEINEAFAAQVLAFLEAL 62 (123)
T ss_dssp HHHHHHHHH------T--GGGESEEEE--SBHHHHHHHHHHH
T ss_pred HHHHHHHHh------CCCccccchhhccchhhhHHHHhhccc
Confidence 444555555 799999999999999998888877777
No 171
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=81.24 E-value=6.8 Score=39.00 Aligned_cols=82 Identities=16% Similarity=0.118 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCC-CceeEeec--CcChhHHHHHHHHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEGVDST--NACYGGTAALFNCVNWV 131 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~-~~~~~di~--~aC~gg~~AL~~A~~~l 131 (465)
....++.+++|+++|+++++|+.+++... .+..-..+.+.||+ +. +.. ..+. ..|.+...-+.++ .++
T Consensus 219 ~~~~~~~~~~l~~~g~~~~di~~~~~h~~-----~~~~~~~~~~~lgi--~~~k~~-~~~~~~Gn~~sas~~~~L~-~~~ 289 (318)
T TIGR00747 219 RKMGDVVEETLEANGLDPEDIDWFVPHQA-----NLRIIEALAKRLEL--DMSQVV-KTVHKYGNTSAASIPLALD-ELL 289 (318)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHcCC--CHHHee-ehHhhhCCHHHHHHHHHHH-HHH
Confidence 34566788999999999999999996432 33455678999998 32 222 2221 2343333333332 344
Q ss_pred HcCC-CCCCEEEEEE
Q 012353 132 ESSS-WDGRYGLVVC 145 (465)
Q Consensus 132 ~sg~-~~~~~aLVVa 145 (465)
+++. .+|+++|+++
T Consensus 290 ~~~~~~~Gd~vll~~ 304 (318)
T TIGR00747 290 RTGRIKPGDLLLLVA 304 (318)
T ss_pred HcCCCCCCCEEEEEE
Confidence 5542 3778999887
No 172
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=81.11 E-value=13 Score=39.21 Aligned_cols=39 Identities=10% Similarity=-0.056 Sum_probs=30.5
Q ss_pred HHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhh
Q 012353 219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLF 263 (465)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~ 263 (465)
.+.+.++++. |++++|||.+=+|-+|.-+.-..++.|.|
T Consensus 313 ~A~~~a~~~A------Gl~~~DiD~~Ei~daFa~~~l~~~e~lGl 351 (438)
T PTZ00455 313 AAAQKALSMA------GVKPSDLQVAEVHDCFTIAELLMYEALGI 351 (438)
T ss_pred HHHHHHHHHc------CCCHHHCcEeeecccChHHHHHHHHHcCC
Confidence 3444454554 89999999999999999988888888843
No 173
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=80.71 E-value=10 Score=39.31 Aligned_cols=95 Identities=14% Similarity=0.131 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccC---CC--CceeEeecCcChhHHHHHHHHHHHH
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG---NT--DIEGVDSTNACYGGTAALFNCVNWV 131 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g---~~--~~~~~di~~aC~gg~~AL~~A~~~l 131 (465)
...|++++|+++|++++|||.+.+.- ..........+.||+.. |+ ...++-.-.+|+|...-+..+..+-
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d-----~f~~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~ 368 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE-----AFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQ 368 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc-----cchHHHHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHH
Confidence 46799999999999999999998733 22233445567777620 01 1112222246777666666766664
Q ss_pred HcCCCCCCEEEEEEeccccccCCCCCcccccceeeeeecC
Q 012353 132 ESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP 171 (465)
Q Consensus 132 ~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGA~A~Ll~~ 171 (465)
..+ +++.|+... -.|.-+.||||++
T Consensus 369 ~~~---~~~gl~~~~------------~~gg~g~a~~~e~ 393 (394)
T PRK06445 369 IKG---KDYGVATLC------------VGGGQGGAVVLER 393 (394)
T ss_pred hcC---CCEEEEEEc------------ccCChhhEEEEEc
Confidence 333 366666541 1344556777653
No 174
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=80.46 E-value=7.9 Score=38.56 Aligned_cols=77 Identities=12% Similarity=-0.081 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCcee----Eeec-CcChhHHHHHHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEG----VDST-NACYGGTAALFNCVN 129 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~----~di~-~aC~gg~~AL~~A~~ 129 (465)
....++++++|+++|+.++|||.++..........+-....+...++. ..... -.++ ..++++...|..+..
T Consensus 205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~---~~~~~~~~~~~~G~~~aas~~~~l~~~~~ 281 (332)
T cd00825 205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGD---KSPAVSATKAMTGNLSSAAVVLAVDEAVL 281 (332)
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCC---CCceeECCCcccccchhHhHHHHHHHHHH
Confidence 445578999999999999999999976544433222223333333431 11111 1333 355556666666666
Q ss_pred HHHcC
Q 012353 130 WVESS 134 (465)
Q Consensus 130 ~l~sg 134 (465)
.++.+
T Consensus 282 ~~~~~ 286 (332)
T cd00825 282 MLEHG 286 (332)
T ss_pred HHhcC
Confidence 55554
No 175
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=80.24 E-value=4.6 Score=41.28 Aligned_cols=97 Identities=10% Similarity=-0.049 Sum_probs=62.0
Q ss_pred CHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccC---CCCceeE-eecC-cChhHHHHHHH
Q 012353 52 DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG---NTDIEGV-DSTN-ACYGGTAALFN 126 (465)
Q Consensus 52 d~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g---~~~~~~~-di~~-aC~gg~~AL~~ 126 (465)
.-.....+|++.++++.|+.++|.|.+++.+-.+-. ...++..||... .+..... .++| -|.+...+|..
T Consensus 206 ~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k~-----~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las 280 (377)
T COG3425 206 AYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGKF-----PKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLAS 280 (377)
T ss_pred HHHHHHHHHHHHHHHHhCCChhhhCeEEecCCCCch-----HHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHH
Confidence 356777899999999999999999999987654433 233444444310 1233333 3544 55555555554
Q ss_pred HHHHHHcCCCCCCEEEEEEeccccccCCCCCcccccceeeeeec
Q 012353 127 CVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVG 170 (465)
Q Consensus 127 A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGA~A~Ll~ 170 (465)
...-.. .+|+++|+++ +|-||++-..+
T Consensus 281 ~L~~a~---~~G~rIl~~S--------------YGSGa~s~~fs 307 (377)
T COG3425 281 LLDNAK---LPGDRILLFS--------------YGSGAGSEAFS 307 (377)
T ss_pred HHhhcC---CCCCEEEEEe--------------eCCCcceeEEE
Confidence 444333 2679999988 78888776554
No 176
>PRK04262 hypothetical protein; Provisional
Probab=79.98 E-value=6.2 Score=40.07 Aligned_cols=83 Identities=14% Similarity=0.145 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCce-eE---eecC-cChhHHHHHHHH
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE-GV---DSTN-ACYGGTAALFNC 127 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~-~~---di~~-aC~gg~~AL~~A 127 (465)
......++.+++|+++|++++|||.+++..- .+.+-..+++.||+. ..++. .+ +++| ++++-..+|..+
T Consensus 207 ~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~-----n~~~~~~~~~~Lgl~-~ek~~~~~~~~~~GNt~sAsi~~~L~~~ 280 (347)
T PRK04262 207 YFKHIISAAKGLMEKLGLKPSDYDYAVFHQP-----NGKFPLRVAKMLGFT-KEQVKPGLLTPYIGNTYSGSALLGLAAV 280 (347)
T ss_pred HHHHHHHHHHHHHHHhCcCHHHhceeecCCC-----chHHHHHHHHHcCCC-HHHhhccchhhhhCChHHHHHHHHHHHH
Confidence 3456778899999999999999999987522 223444678889872 12222 11 2222 344444455444
Q ss_pred HHHHHcCCCCCCEEEEEE
Q 012353 128 VNWVESSSWDGRYGLVVC 145 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVa 145 (465)
.. . ..+|+++|+++
T Consensus 281 ~~---~-~~~Gd~vll~~ 294 (347)
T PRK04262 281 LD---V-AKPGDRILVVS 294 (347)
T ss_pred HH---h-CCCCCEEEEEe
Confidence 33 2 22778998887
No 177
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=79.77 E-value=4.8 Score=40.95 Aligned_cols=48 Identities=17% Similarity=0.190 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhcc
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
..-...|.+++|+++|++|+|||.|. ++|.|+. .-+.-...|.+.||.
T Consensus 205 ~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~-~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 205 GDGAYRAMKIALRQAGITPEQVQHLNAHATSTPV-GDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcC-CCHHHHHHHHHHhCC
Confidence 45567899999999999999999987 4455543 244566778888884
No 178
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=79.37 E-value=6 Score=39.27 Aligned_cols=84 Identities=13% Similarity=0.083 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec--CcChhHHHHHHHHHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST--NACYGGTAALFNCVNWVE 132 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~--~aC~gg~~AL~~A~~~l~ 132 (465)
....++.+++|+++|++++|||.+++... .+..-..+.+.||+ +..-....+. ..|.+...-+.+ ..+++
T Consensus 223 ~~~~~~i~~~l~~~g~~~~di~~~~~h~~-----~~~~~~~~~~~lgl--~~~~~~~~~~~~Gn~~sas~~~~L-~~~~~ 294 (320)
T cd00830 223 RLMPESIEEALEKAGLTPDDIDWFVPHQA-----NLRIIEAVAKRLGL--PEEKVVVNLDRYGNTSAASIPLAL-DEAIE 294 (320)
T ss_pred HhhHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHhCC--CHHHhhhhHHhhCcHHHHHHHHHH-HHHHH
Confidence 44567889999999999999999987543 33444568889997 3221111222 234333333333 33455
Q ss_pred cCC-CCCCEEEEEEe
Q 012353 133 SSS-WDGRYGLVVCT 146 (465)
Q Consensus 133 sg~-~~~~~aLVVas 146 (465)
.+. .+|+++|+++.
T Consensus 295 ~~~~~~G~~vll~~~ 309 (320)
T cd00830 295 EGKLKKGDLVLLLGF 309 (320)
T ss_pred cCCCCCCCEEEEEEE
Confidence 553 26889988873
No 179
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=78.33 E-value=12 Score=39.25 Aligned_cols=31 Identities=16% Similarity=0.223 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHHHHCCCCcCCccEEEEEe
Q 012353 52 DVISMSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (465)
Q Consensus 52 d~~~la~~Aa~~aL~~agi~~~~Id~li~~T 82 (465)
+.......|++++++++|++++|||.+.+.-
T Consensus 306 ~~~~~~~~a~~~a~~~AGl~~~Did~~Ei~d 336 (427)
T PRK09268 306 GLLMAPAYAVPRLLARNGLTLQDFDFYEIHE 336 (427)
T ss_pred hhhccHHHHHHHHHHHcCCCHHHCCEEEecc
Confidence 3445566799999999999999999999743
No 180
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=76.37 E-value=9.2 Score=38.02 Aligned_cols=81 Identities=12% Similarity=0.014 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec--CcChhHHHHHHHHHHHHHcC
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST--NACYGGTAALFNCVNWVESS 134 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~--~aC~gg~~AL~~A~~~l~sg 134 (465)
..++.+++|+++|++++|||.++.... .+..-..+.+.||+ +..-....+. ..|.+.. -+.+-..+++++
T Consensus 221 ~~~~i~~~l~~~g~~~~di~~~~~h~~-----~~~~~~~~~~~lg~--~~~~~~~~~~~~Gn~~~a~-~~~~L~~~~~~g 292 (319)
T PRK09352 221 LAKVAREALEAAGLTPEDIDWLVPHQA-----NLRIIDATAKKLGL--PMEKVVVTVDKYGNTSAAS-IPLALDEAVRDG 292 (319)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHhCC--CHHHhhhhHHhhCCHHHHH-HHHHHHHHHHcC
Confidence 445788899999999999999987432 33445678889997 3221111121 2233333 233333445555
Q ss_pred C-CCCCEEEEEE
Q 012353 135 S-WDGRYGLVVC 145 (465)
Q Consensus 135 ~-~~~~~aLVVa 145 (465)
. .+|+++|+++
T Consensus 293 ~~~~Gd~vll~s 304 (319)
T PRK09352 293 RIKRGDLVLLEG 304 (319)
T ss_pred CCCCCCEEEEEE
Confidence 3 3688999887
No 181
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=76.00 E-value=7 Score=40.32 Aligned_cols=99 Identities=12% Similarity=0.051 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCC----------ceeEeecCcChhHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTD----------IEGVDSTNACYGGTAAL 124 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~----------~~~~di~~aC~gg~~AL 124 (465)
....++.+++|+++|+.++|||.+++..-.+-...++... +.+.+++ ... ....+--..|+++..-|
T Consensus 205 ~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~~~~-~l~~~~~--~~~~~~~~~~~~s~~~~~~~GN~~sas~~l 281 (379)
T TIGR01835 205 NAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKALRH-ILKKNYE--DEDESVQNAYLESIIYNREVGNLYTGSLYL 281 (379)
T ss_pred HHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHHHHH-HHhhccc--ccHHHHHHHhhhhhhhhhhcCchHhHHHHH
Confidence 3456778899999999999999999865333222222222 3344443 110 00111112344433333
Q ss_pred HHHHHHHHcC--CCCCCEEEEEEeccccccCCCCCcccccceeeeeecC
Q 012353 125 FNCVNWVESS--SWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP 171 (465)
Q Consensus 125 ~~A~~~l~sg--~~~~~~aLVVasD~~~y~~~~~~~t~GdGA~A~Ll~~ 171 (465)
.++ ++++.+ ..+|+++++++ +|.|++|.+.+-
T Consensus 282 ~L~-~~l~~~~~~~~Gd~ill~s--------------~GsG~~ae~~~~ 315 (379)
T TIGR01835 282 GLA-SLLENAFEDTTGDKIGLFS--------------YGSGAVAEFFSG 315 (379)
T ss_pred HHH-HHHHhcccCCCCCEEEEEE--------------ecCCcceeeEEE
Confidence 333 334443 23789999887 788988877654
No 182
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=75.40 E-value=7.7 Score=40.23 Aligned_cols=28 Identities=11% Similarity=0.121 Sum_probs=25.0
Q ss_pred CCCCCCCceeeccCCchHHHHHHHHHhh
Q 012353 235 QFSLSNADYFVFHSPYNKLVQKSFARLL 262 (465)
Q Consensus 235 ~~~~~did~~~~H~p~~km~~~~~~~L~ 262 (465)
|++++|||.+=+|-+|.-+.--..+.|.
T Consensus 283 gi~~~DID~~Ei~d~Fa~~~l~~~e~lg 310 (393)
T cd00826 283 GLGIGDLDLIEAHDAFAANACATNEALG 310 (393)
T ss_pred CCCHHHcCeeehhhhhHHHHHHHHHHhC
Confidence 7899999999999999988888888774
No 183
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=74.21 E-value=17 Score=34.50 Aligned_cols=32 Identities=19% Similarity=0.104 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCccEEEEEeec
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSET 84 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s 84 (465)
......++.+++|+++|++++|||.++.....
T Consensus 143 ~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~ 174 (254)
T cd00327 143 SGEGLARAARKALEGAGLTPSDIDYVEAHGTG 174 (254)
T ss_pred ChHHHHHHHHHHHHHcCCCHHHCCEEEccCCc
Confidence 34556788999999999999999998864433
No 184
>PRK07937 lipid-transfer protein; Provisional
Probab=73.00 E-value=17 Score=37.08 Aligned_cols=77 Identities=9% Similarity=-0.027 Sum_probs=39.3
Q ss_pred eechHHHHHhcCCChhhhhhhhcCeEEecCCCCCCHHHHHHHHHHHHHHH-CCCCcCCccEEEEEeecCCCCcccHHHHH
Q 012353 18 CVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEK-YKIDPKQIGRLEVGSETVIDKSKSIKTFL 96 (465)
Q Consensus 18 ~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~-agi~~~~Id~li~~T~s~~~~~ps~a~~l 96 (465)
.|..++.++..+..|-++. |.++..-.......|.. ...++++++++ +|++|+|||.+.+. |..+......
T Consensus 212 vl~s~~~A~~l~~~pv~I~-g~~~~~~~~~~~~~d~~--~~~~~~~a~~~aAgi~~~diD~~Ei~-----D~F~~~~l~~ 283 (352)
T PRK07937 212 VLAAGDRARELRERPAWIT-GIEHRIESPSLGARDLT--RSPSTALAAEAATGGDAGGVDVAELH-----APFTHQELIL 283 (352)
T ss_pred EEecHHHHHHcCCCcEEEE-EEEEeeCCccccccccc--cHHHHHHHHHHhcCCCHHHCCEEEEe-----CCChHHHHHH
Confidence 3455566666555554442 33332100000111221 12334455555 59999999999873 2233344456
Q ss_pred HHHhcc
Q 012353 97 MQIFEK 102 (465)
Q Consensus 97 ~~~LGl 102 (465)
.+.||+
T Consensus 284 ~e~lGl 289 (352)
T PRK07937 284 REALGL 289 (352)
T ss_pred HHHcCC
Confidence 677886
No 185
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=71.08 E-value=15 Score=38.19 Aligned_cols=36 Identities=14% Similarity=0.287 Sum_probs=28.4
Q ss_pred HHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHh
Q 012353 220 CYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L 261 (465)
+.+..+++. |++++|||++-+|-+|.-+...+.+.|
T Consensus 305 a~~~al~~A------Gl~~~DID~~ei~daFa~~~l~~~e~l 340 (402)
T PRK08242 305 ATRKALAKA------GLTVDDIDLFELNEAFASVVLRFMQAL 340 (402)
T ss_pred HHHHHHHHc------CCCHHHCCEEEecchhhHHHHHHHHHh
Confidence 445555554 899999999999999998777777766
No 186
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=69.57 E-value=15 Score=38.36 Aligned_cols=46 Identities=13% Similarity=0.110 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhcc
Q 012353 56 MSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 56 la~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
....|.+++|+++|++|++||.|. ++|.|+.. -+.-...|.+.||-
T Consensus 279 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~-D~~E~~al~~~fg~ 325 (414)
T PRK08722 279 GGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAG-DVAEIKGIKRALGE 325 (414)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEccCccCCCC-CHHHHHHHHHHhcc
Confidence 456788999999999999999997 45555432 34556678888874
No 187
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=69.10 E-value=61 Score=34.06 Aligned_cols=38 Identities=16% Similarity=0.201 Sum_probs=29.8
Q ss_pred HHHHHHHHHhhhhhcCCCC--CCCCceeeccCCchHHHHHHHHHhh
Q 012353 219 TCYKCLCSKYEKLEGKQFS--LSNADYFVFHSPYNKLVQKSFARLL 262 (465)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~--~~did~~~~H~p~~km~~~~~~~L~ 262 (465)
.+.+.+.++. |++ ++|||.+-+|-+|.-+..-.++.|.
T Consensus 297 ~a~~~a~~~A------Gl~~~~~DiD~~Ei~D~Fa~~~l~~lE~lG 336 (430)
T PRK06365 297 MAAKEAYEMA------GITDPLNDLDLIELHDAYTSSEIQTYEDLG 336 (430)
T ss_pred HHHHHHHHHc------CCCCCHHHCCEEEeecCCcHHHHHHHHHcC
Confidence 3445555554 787 7999999999999998888888874
No 188
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=68.24 E-value=22 Score=36.87 Aligned_cols=27 Identities=15% Similarity=0.314 Sum_probs=23.5
Q ss_pred CCCCCCCceeeccCCchHHHHHHHHHh
Q 012353 235 QFSLSNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 235 ~~~~~did~~~~H~p~~km~~~~~~~L 261 (465)
|++++|||++=+|-+|.-+.....+.|
T Consensus 305 gi~~~Did~~Ei~d~f~~~~l~~~e~l 331 (394)
T PLN02644 305 GLEASQVDYYEINEAFSVVALANQKLL 331 (394)
T ss_pred CCCHHHCCEEEeCcHHHHHHHHHHHHh
Confidence 799999999999999988777777766
No 189
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=67.96 E-value=15 Score=38.46 Aligned_cols=46 Identities=13% Similarity=0.128 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhcc
Q 012353 56 MSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 56 la~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
-..+|.+++|+++|++|+|||.|. ++|.|+.- -+.-...|++.||.
T Consensus 287 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~-D~~E~~Al~~~fg~ 333 (418)
T PRK07910 287 RAGHAMTRAIELAGLTPGDIDHVNAHATGTSVG-DVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCC-CHHHHHHHHHHhCC
Confidence 367899999999999999999997 45555432 34556678888884
No 190
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=67.89 E-value=22 Score=36.74 Aligned_cols=41 Identities=17% Similarity=0.132 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcc
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
...|++++|+++|++++|||.+.+.-... .......+.||+
T Consensus 260 ~~~a~~~al~~aGi~~~did~~e~~d~ft-----~~~~~~~e~lgl 300 (389)
T PRK06064 260 AVVAAEKAYKMAGIEPKDIDVAEVHDCFT-----IAEILAYEDLGF 300 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCCCc-----HHHHHHHHHcCC
Confidence 45799999999999999999998643222 123334566665
No 191
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=67.69 E-value=17 Score=37.96 Aligned_cols=75 Identities=15% Similarity=0.259 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhcccCCCCceeEee---cCcChhHHHHHHHHHHHHH
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS---TNACYGGTAALFNCVNWVE 132 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di---~~aC~gg~~AL~~A~~~l~ 132 (465)
+..|.+.+|+++|++|++||.|- ++|.|+.. -+.-+..|.+.||-+ ..+...... ..-|-|+.-++..+..++.
T Consensus 278 a~~am~~AL~~Agl~~~~idYinaHgTsT~~n-D~~E~~ai~~vfg~~-~~~~~vsstKs~tGH~lGAaGaveai~~~l~ 355 (412)
T COG0304 278 AIRAMRAALADAGLTPEDIDYINAHGTSTPAN-DKAESLAIKRVFGEH-AKSLPVSSTKSLTGHTLGAAGAVEAIISLLA 355 (412)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCCCccCCCc-cHHHHHHHHHHhccc-ccCceeeecccccccChhhHHHHHHHHHHHH
Confidence 34888999999999999999997 66777653 556677788888842 122222222 2345566666666665554
Q ss_pred c
Q 012353 133 S 133 (465)
Q Consensus 133 s 133 (465)
-
T Consensus 356 l 356 (412)
T COG0304 356 L 356 (412)
T ss_pred H
Confidence 3
No 192
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=67.46 E-value=25 Score=35.98 Aligned_cols=82 Identities=12% Similarity=0.194 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHH-hcccCCCCce---eE-eec-CcChhHHHHHHHH
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQI-FEKFGNTDIE---GV-DST-NACYGGTAALFNC 127 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~-LGl~g~~~~~---~~-di~-~aC~gg~~AL~~A 127 (465)
.+...++.+++|+++|++++|||.+++...+.. +--.+.+. ||+. .+.-. .+ +++ .+|++-..+|..+
T Consensus 270 ~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~~~-----~~d~~~~~llg~~-~~~~~~~~~~~~~GNt~sasi~~~L~~~ 343 (372)
T PRK07515 270 CPMVAEHIVEHLAENGLTPADVKRFWLHQANIN-----MNQLIGKKVLGRD-ATPEEAPVILDEYANTSSAGSIIAFHKH 343 (372)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH-----HHHHHHHHhccCC-CChhhceEeHHhcCCchhhHHHHHHHHH
Confidence 444678899999999999999999887433221 11223444 6741 11211 12 222 3555555566555
Q ss_pred HHHHHcCCCCCCEEEEEE
Q 012353 128 VNWVESSSWDGRYGLVVC 145 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVa 145 (465)
...+ .+|+++|+++
T Consensus 344 ~~~~----~~Gd~vll~~ 357 (372)
T PRK07515 344 SDDL----AAGDLGVICS 357 (372)
T ss_pred hccC----CCCCEEEEEE
Confidence 3322 2678888877
No 193
>PRK05790 putative acyltransferase; Provisional
Probab=67.40 E-value=26 Score=36.27 Aligned_cols=86 Identities=16% Similarity=0.169 Sum_probs=52.6
Q ss_pred CCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhcc
Q 012353 235 QFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKV 314 (465)
Q Consensus 235 ~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~ 314 (465)
|++++|||++-+|-+|.-+.--..+.|. +....+ |.+
T Consensus 305 gi~~~did~~e~~d~f~~~~l~~~e~lg------------------------~~~~pv-----------N~~-------- 341 (393)
T PRK05790 305 GWSLADLDLIEINEAFAAQALAVEKELG------------------------LDPEKV-----------NVN-------- 341 (393)
T ss_pred CCCHHHCCEEEeCcHHHHHHHHHHHHhC------------------------CChhhc-----------CCC--------
Confidence 7899999999999999877766666662 221110 110
Q ss_pred CCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEE-eccchheeeeEEE
Q 012353 315 QPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFS-YGSGLTATMFSLK 369 (465)
Q Consensus 315 ~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~s-yGsG~~~~~~~~~ 369 (465)
-+ .--+||...||=..-+.+++.+- + ..|.|.++.+ .|.|....+++++
T Consensus 342 -GG---~l~~Ghp~gatG~~~~~e~~~qL-~-~~~~~~gl~~~~~~~g~g~~~~~e 391 (393)
T PRK05790 342 -GG---AIALGHPIGASGARILVTLLHEM-K-RRGAKKGLATLCIGGGQGVALIVE 391 (393)
T ss_pred -cc---hhhhCcchhhhHHHHHHHHHHHH-H-hcCCCeEEEEEeccCCceeEEEEE
Confidence 00 03579998888777777776651 1 1345555554 4555555555554
No 194
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=67.25 E-value=16 Score=37.93 Aligned_cols=41 Identities=15% Similarity=0.064 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHCCCC--cCCccEEEEEeecCCCCcccHHHHHHHHhcc
Q 012353 57 SLTAVTNLLEKYKID--PKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 57 a~~Aa~~aL~~agi~--~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
...|++++++++|++ ++|||.+.+. |......-...+.||+
T Consensus 268 ~~~aa~~a~~~AGl~~~~~Did~~Ei~-----D~Fs~~~l~~~e~lGl 310 (398)
T PRK06157 268 TRIAARKAYREAGITDPREELSMAEVH-----DCFSITELVTMEDLGL 310 (398)
T ss_pred HHHHHHHHHHHcCCCCchhcCCEEEEe-----cCChHHHHHHHHHcCC
Confidence 567999999999997 7999999863 2222334445667776
No 195
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=66.64 E-value=21 Score=37.02 Aligned_cols=36 Identities=11% Similarity=0.233 Sum_probs=27.5
Q ss_pred HHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHh
Q 012353 220 CYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L 261 (465)
+.+.++++. |++++|||++=+|-+|.-+.-...+.|
T Consensus 300 a~~~al~~a------gl~~~Did~~ei~d~fa~~~l~~~e~l 335 (397)
T PRK06954 300 AIRKLFEKN------GWRAAEVDLFEINEAFAVVTMAAMKEH 335 (397)
T ss_pred HHHHHHHHc------CCCHHHCCEEehhhHHHHHHHHHHHHh
Confidence 444455554 799999999999999988776666666
No 196
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=66.51 E-value=15 Score=37.92 Aligned_cols=46 Identities=15% Similarity=0.387 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhc
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFE 101 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LG 101 (465)
....+|.+++|+++|++|+|||.|. ++|.|+.- .+.-...|++.+|
T Consensus 254 ~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~-D~~E~~al~~~fg 300 (381)
T PRK05952 254 KSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLN-DQREANLIQALFP 300 (381)
T ss_pred HHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCC-cHHHHHHHHHHcC
Confidence 4567899999999999999999997 45555432 3344555777776
No 197
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=65.98 E-value=19 Score=37.20 Aligned_cols=27 Identities=22% Similarity=0.389 Sum_probs=22.5
Q ss_pred CCCCCCCceeeccCCchHHHHHHHHHh
Q 012353 235 QFSLSNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 235 ~~~~~did~~~~H~p~~km~~~~~~~L 261 (465)
|++++|||++-+|-.|.-+..-..+.|
T Consensus 300 gi~~~did~~e~~d~fa~~~~~~~e~l 326 (386)
T TIGR01930 300 GLSISDIDLFEINEAFAAQVLACIKEL 326 (386)
T ss_pred CCCHHHCCeeehcchhHHHHHHHHHHh
Confidence 799999999999999987666666665
No 198
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=65.56 E-value=17 Score=37.32 Aligned_cols=80 Identities=10% Similarity=0.151 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEE-EeecCCCCcccHHHHHHHHhcccCCCCceeEee----c-CcChhHHHHHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEV-GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS----T-NACYGGTAALFNCV 128 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~-~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di----~-~aC~gg~~AL~~A~ 128 (465)
.-..++++++|+++|++++|||.|.. +|.|+. ..+.-+..|.+.++.. ...+..-.. + ..+++|+..|..+.
T Consensus 275 ~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~-~d~~E~~al~~~~~~~-~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~ 352 (406)
T cd00834 275 EGAARAMRAALADAGLSPEDIDYINAHGTSTPL-NDAAESKAIKRVFGEH-AKKVPVSSTKSMTGHLLGAAGAVEAIATL 352 (406)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecccccCcc-ccHHHHHHHHHHhccc-CCCCceeCcchhhccchhhhhHHHHHHHH
Confidence 44557899999999999999999884 444442 2334455677777631 012322222 2 24566666777777
Q ss_pred HHHHcCCC
Q 012353 129 NWVESSSW 136 (465)
Q Consensus 129 ~~l~sg~~ 136 (465)
..++.+..
T Consensus 353 ~~l~~~~i 360 (406)
T cd00834 353 LALRDGVL 360 (406)
T ss_pred HHHhcCCc
Confidence 77777754
No 199
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=65.15 E-value=28 Score=35.85 Aligned_cols=85 Identities=15% Similarity=0.157 Sum_probs=54.1
Q ss_pred CCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhcc
Q 012353 235 QFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKV 314 (465)
Q Consensus 235 ~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~ 314 (465)
|++++|||++=+|-+|.-+.....+.| |+..+.+..+ -..
T Consensus 294 gi~~~did~~e~~d~Fa~~~~~~~e~l------------------------G~~~~pvN~~-------GG~--------- 333 (382)
T PRK07801 294 GLSIDDIDVVEINEAFAPVVLAWLKET------------------------GADPAKVNPN-------GGA--------- 333 (382)
T ss_pred CCCHHHcCEeeecccchHHHHHHHHHh------------------------CCCchhcCCC-------cch---------
Confidence 789999999999999999888887777 3332211110 001
Q ss_pred CCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEE-eccchheeeeEE
Q 012353 315 QPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFS-YGSGLTATMFSL 368 (465)
Q Consensus 315 ~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~s-yGsG~~~~~~~~ 368 (465)
--+||...||=..-+.+++.+- + ..|.|+++.+ .|.|.+..+.++
T Consensus 334 -------l~~Ghp~gasG~~~~~e~~~qL-~-~~~~~~gl~~~~gggg~~~~~vl 379 (382)
T PRK07801 334 -------IALGHPLGATGAKLMTTLLHEL-E-RTGGRYGLQTMCEGGGTANVTII 379 (382)
T ss_pred -------hhhcCcHHHHHHHHHHHHHHHH-H-hcCCCEEEEEEcccccceeEEEE
Confidence 3578988888777777776651 1 2456667666 444444444433
No 200
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=64.98 E-value=14 Score=37.30 Aligned_cols=86 Identities=13% Similarity=0.070 Sum_probs=52.0
Q ss_pred CHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec--CcChhHHHHHHHHHH
Q 012353 52 DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST--NACYGGTAALFNCVN 129 (465)
Q Consensus 52 d~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~--~aC~gg~~AL~~A~~ 129 (465)
-++.+..++.+++|++++++++|||.++..-. ...+-..+.++||+ ...-....+. ..+++...-|.+. .
T Consensus 220 ~av~~~~~~~~~~L~~~~l~~~dId~~vpHQa-----n~ri~~~i~~~l~~--~~~k~~~~~~~yGNtsaAsiplaL~-~ 291 (323)
T COG0332 220 FAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQA-----NLRIIEAIAKKLGI--PEEKVVVTVDKYGNTSAASIPLALD-E 291 (323)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEccccc-----cHHHHHHHHHHcCC--CHHHHhhHHHHhcccccchHHHHHH-H
Confidence 36788888999999999999999999986322 22344568888887 3333333332 2333332222222 2
Q ss_pred HHHcCCC-CCCEEEEEE
Q 012353 130 WVESSSW-DGRYGLVVC 145 (465)
Q Consensus 130 ~l~sg~~-~~~~aLVVa 145 (465)
.++.|.. +|..+|+++
T Consensus 292 ~~~~g~ik~Gd~ill~~ 308 (323)
T COG0332 292 ALREGRIKPGDLVLLEA 308 (323)
T ss_pred HhhhCCCCCCCEEEEEe
Confidence 2444432 566777665
No 201
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=64.59 E-value=15 Score=39.76 Aligned_cols=45 Identities=11% Similarity=0.185 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhcc
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
.+.|.+++|+++|++|++||.|. ++|.|+.- -+.-...|.+.||-
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~g-D~~E~~Ai~~~Fg~ 452 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAG-DLKEYQALMRCFGQ 452 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCC-CHHHHHHHHHHhCC
Confidence 45789999999999999999987 56666543 23445567888874
No 202
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=64.22 E-value=19 Score=35.81 Aligned_cols=27 Identities=11% Similarity=0.253 Sum_probs=20.6
Q ss_pred CCCCCCCceeeccCCchHHHHHHHHHh
Q 012353 235 QFSLSNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 235 ~~~~~did~~~~H~p~~km~~~~~~~L 261 (465)
|+..+|||+|=..-.|..-.--..++|
T Consensus 334 GL~v~did~FEINEAFAsQ~~yc~~KL 360 (435)
T KOG1389|consen 334 GLEVDDIDLFEINEAFASQALYCRNKL 360 (435)
T ss_pred CCcccccceeehhHHHHHHHHHHHHHh
Confidence 899999999988777766555555555
No 203
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=63.90 E-value=22 Score=36.87 Aligned_cols=48 Identities=10% Similarity=0.040 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhcc
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
..-..+|.+++|+++|++|++||.|. ++|.|+.. -+.-...|.+.||.
T Consensus 269 ~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~-D~~E~~al~~~fg~ 317 (399)
T cd00832 269 PPGLARAIRLALADAGLTPEDVDVVFADAAGVPEL-DRAEAAALAAVFGP 317 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCC-CHHHHHHHHHHhCC
Confidence 34456789999999999999999987 44555432 34555668888874
No 204
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=63.13 E-value=9.2 Score=39.59 Aligned_cols=77 Identities=13% Similarity=0.108 Sum_probs=44.5
Q ss_pred eechHHHHHhcCCChhhhhhhhcCeE--EecCCCCCCHHHHHH--HHHHHHHHHCCCC--cCCccEEEEEeecCCCCccc
Q 012353 18 CVQQEALEAHDGASKGKYTIGLGQEC--MAFCSEVEDVISMSL--TAVTNLLEKYKID--PKQIGRLEVGSETVIDKSKS 91 (465)
Q Consensus 18 ~v~~~~l~~~~g~~~~k~~~Gig~r~--~av~~~~Ed~~~la~--~Aa~~aL~~agi~--~~~Id~li~~T~s~~~~~ps 91 (465)
.|..++.++..+..|-++ .|+++.. ..+ ..++...+.. .|++++++++|++ ++|||.+.+. |....
T Consensus 218 vl~s~~~a~~l~~~pv~I-~g~g~~~~~~~~--~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~-----D~Ft~ 289 (385)
T PRK06066 218 VLASEEVAKKLTDDPVWI-KGIGWSTESSNL--ETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVD-----DRYSY 289 (385)
T ss_pred EEeCHHHHHhcCCCCEEE-EEEEEecCCccc--ccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEe-----cCChH
Confidence 345556666555555544 3444321 111 1233333443 7999999999997 6999999874 32323
Q ss_pred HHHHHHHHhcc
Q 012353 92 IKTFLMQIFEK 102 (465)
Q Consensus 92 ~a~~l~~~LGl 102 (465)
......+.||+
T Consensus 290 ~~l~~~e~lG~ 300 (385)
T PRK06066 290 KELQHIEALRL 300 (385)
T ss_pred HHHHHHHHcCC
Confidence 33445566775
No 205
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=62.92 E-value=13 Score=38.33 Aligned_cols=45 Identities=18% Similarity=0.348 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhcc
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
..+|++++|+++|++++|||.+. ++|.|+. ..+.-...+.+.||.
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~-~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPL-GDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCC-CCHHHHHHHHHHhcc
Confidence 56789999999999999999997 4455543 234556667788873
No 206
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=62.88 E-value=20 Score=37.04 Aligned_cols=45 Identities=18% Similarity=0.346 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhcc
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
..+|.+++|+++|++|+|||.+. ++|.|+.- -+.-...|.+.+|.
T Consensus 262 ~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~-D~~E~~al~~~f~~ 307 (392)
T PRK09185 262 AILAMQQALADAGLAPADIGYINLHGTATPLN-DAMESRAVAAVFGD 307 (392)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeCCCCCcCC-CHHHHHHHHHHhCC
Confidence 35889999999999999999987 45555432 23445667788873
No 207
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=62.14 E-value=37 Score=34.67 Aligned_cols=44 Identities=11% Similarity=0.043 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcc
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
..-...|++++|+++|++++|||.+.+..+.+ ...-...+.||+
T Consensus 250 ~~~~~~a~~~al~~Agl~~~did~~ei~d~F~-----~~~l~~~e~lGl 293 (375)
T cd00829 250 LDAARLAARRAYKMAGITPDDIDVAELYDCFT-----IAELLALEDLGF 293 (375)
T ss_pred cHHHHHHHHHHHHHcCCCHHHCCEEEecCcCh-----HHHHHHHHHcCC
Confidence 34455899999999999999999998744332 233344556665
No 208
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=61.84 E-value=11 Score=39.07 Aligned_cols=79 Identities=10% Similarity=0.006 Sum_probs=43.7
Q ss_pred eechHHHHHhcCCChhhhhhhhcCeEEecCCCCCC-HHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHH
Q 012353 18 CVQQEALEAHDGASKGKYTIGLGQECMAFCSEVED-VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFL 96 (465)
Q Consensus 18 ~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~Ed-~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l 96 (465)
.|+.++.++..+.++-++ .|.++..-.......| .......|++++++++|++|+|||.+.+..+.+ ...-..
T Consensus 218 vl~s~~~A~~l~~~~v~I-~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~elyD~Fs-----~~~~~~ 291 (388)
T PRK08142 218 VVVRPEIARSLKRPLVKV-LGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFT-----ITVLMQ 291 (388)
T ss_pred EEecHHHHhhcCCCCEEE-EEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEeccch-----HHHHHH
Confidence 345556665555444444 2333321111011222 234456899999999999999999988754332 222334
Q ss_pred HHHhcc
Q 012353 97 MQIFEK 102 (465)
Q Consensus 97 ~~~LGl 102 (465)
.+.||+
T Consensus 292 ~E~lGl 297 (388)
T PRK08142 292 LEDLGF 297 (388)
T ss_pred HHHcCC
Confidence 456665
No 209
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=61.06 E-value=40 Score=35.06 Aligned_cols=27 Identities=7% Similarity=0.193 Sum_probs=23.0
Q ss_pred CCCCCCCceeeccCCchHHHHHHHHHh
Q 012353 235 QFSLSNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 235 ~~~~~did~~~~H~p~~km~~~~~~~L 261 (465)
|++++|||++-.|-+|.-......+.|
T Consensus 311 gi~~~did~~ei~D~f~~~~l~~~e~l 337 (399)
T PRK09052 311 GLKQDDLDWIELNEAFAAQSLAVIRDL 337 (399)
T ss_pred CCCHHHcCEEEeCcHHHHHHHHHHHHh
Confidence 789999999999999988777666666
No 210
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=60.33 E-value=18 Score=37.52 Aligned_cols=45 Identities=20% Similarity=0.324 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhcc
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
...|++++|+++|++++|||.+. ++|.|+.. .+.-...|.+.||.
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~-d~~E~~al~~~~~~ 323 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPAG-DKAETQAIKRVFGE 323 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCccc-cHHHHHHHHHHhcc
Confidence 45789999999999999999997 45555432 33445567788874
No 211
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=59.96 E-value=33 Score=35.56 Aligned_cols=37 Identities=11% Similarity=0.124 Sum_probs=28.3
Q ss_pred HHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHh
Q 012353 219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L 261 (465)
.+.+..+++. |++++|||++-.|-+|.-+.....+.|
T Consensus 293 ~a~~~al~~a------gl~~~did~~ei~d~f~~~~l~~~e~l 329 (391)
T PRK07661 293 AAIPKALKLA------GLELSDIGLFELNEAFASQSIQVIREL 329 (391)
T ss_pred HHHHHHHHHc------CCCHHHCCEEEeCCHHHHHHHHHHHHc
Confidence 3444455554 799999999999999988777776666
No 212
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=59.50 E-value=27 Score=36.10 Aligned_cols=47 Identities=11% Similarity=0.112 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEE-EeecCCCCcccHHHHHHHHhcc
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEV-GSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~-~T~s~~~~~ps~a~~l~~~LGl 102 (465)
.-..+|.+++|+++|++|++||.|.. +|.|+. .-+.-...+.+.++.
T Consensus 274 ~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~-~D~~E~~ai~~~~~~ 321 (407)
T cd00828 274 KGIARAIRTALAKAGLSLDDLDVISAHGTSTPA-NDVAESRAIAEVAGA 321 (407)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEecccccCcc-ccHHHHHHHHHHHhc
Confidence 55578899999999999999999874 455543 234455667777774
No 213
>PRK06158 thiolase; Provisional
Probab=59.38 E-value=13 Score=38.45 Aligned_cols=43 Identities=7% Similarity=0.056 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcc
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
.-...|++++++++|++|+|||.+.+.-+.+ ...-...+.||+
T Consensus 254 ~~~~~aa~~A~~~AGi~p~DId~~ElyD~Fs-----~~~l~~~E~lG~ 296 (384)
T PRK06158 254 TAAAESGPRAFAMAGLTPADIDVVELYDAFT-----INTILFLEDLGF 296 (384)
T ss_pred hHHHHHHHHHHHHcCCCHHHCcEEEecCCch-----HHHHHHHHHcCC
Confidence 4456899999999999999999998744332 222233456665
No 214
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=58.94 E-value=28 Score=36.19 Aligned_cols=45 Identities=18% Similarity=0.200 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhc
Q 012353 56 MSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFE 101 (465)
Q Consensus 56 la~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LG 101 (465)
-...+.+++|++++++|++||.|. ++|.|+.. -+.-+..|.+.||
T Consensus 276 ~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~-D~~E~~Ai~~~fg 321 (405)
T PRK09116 276 TMQIAMELALKDAGLAPEDIGYVNAHGTATDRG-DIAESQATAAVFG 321 (405)
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEECcCccCCCC-CHHHHHHHHHHhC
Confidence 345889999999999999999997 55666432 3456667888887
No 215
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=58.76 E-value=25 Score=36.66 Aligned_cols=46 Identities=15% Similarity=0.198 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhc
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFE 101 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LG 101 (465)
.-..+|.+++|+++|++|++||.|. ++|.|+.- .+.-...+.+.||
T Consensus 288 ~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~-D~~E~~al~~~fg 334 (424)
T PRK06333 288 EGARRAMLIALRQAGIPPEEVQHLNAHATSTPVG-DLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEeccCCCCccc-hHHHHHHHHHHhC
Confidence 3456889999999999999999997 45555432 3344556778887
No 216
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=58.11 E-value=31 Score=35.91 Aligned_cols=45 Identities=9% Similarity=-0.115 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhcc
Q 012353 56 MSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 56 la~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
-..+|.+++|+++|+ +++||.|. ++|.|+.. -..-...|.+.|+.
T Consensus 281 ~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~-D~~E~~Ai~~~f~~ 326 (398)
T PRK06519 281 DLEASLERLLKPAGG-LAAPTAVISGATGAHPA-TAEEKAALEAALAG 326 (398)
T ss_pred HHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCc-cHHHHHHHHHHcCC
Confidence 346799999999999 89999987 45655532 23445567777774
No 217
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=56.34 E-value=43 Score=34.76 Aligned_cols=36 Identities=14% Similarity=0.177 Sum_probs=27.9
Q ss_pred HHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHh
Q 012353 220 CYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L 261 (465)
+.+..+++. |++++|||++-+|-+|.-+.....+.|
T Consensus 296 a~~~al~~a------gl~~~did~~e~~d~f~~~~l~~~e~l 331 (393)
T PRK08235 296 AINALLEKT------GKTVEDIDLFEINEAFAAVALASTEIA 331 (393)
T ss_pred HHHHHHHHh------CCCHHHCCeehhcchhHHHHHHHHHHh
Confidence 444454554 799999999999999988777777776
No 218
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=56.12 E-value=39 Score=35.33 Aligned_cols=47 Identities=15% Similarity=0.186 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHH-CCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhcc
Q 012353 55 SMSLTAVTNLLEK-YKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 55 ~la~~Aa~~aL~~-agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
.-...|++++|++ +|++++|||.|. ++|.|+.. .+.-...+.+.+|.
T Consensus 283 ~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~-D~~E~~al~~~~~~ 331 (421)
T PTZ00050 283 RGARRCMENALKDGANININDVDYVNAHATSTPIG-DKIELKAIKKVFGD 331 (421)
T ss_pred HHHHHHHHHHHHhccCCChhhCCEEECCCccCCCC-CHHHHHHHHHHhcc
Confidence 3456789999999 999999999997 44555332 23334457777773
No 219
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=53.68 E-value=22 Score=36.78 Aligned_cols=79 Identities=11% Similarity=0.040 Sum_probs=43.5
Q ss_pred eechHHHHHhcCCChh-hhhhhhcCeE--EecCCCCCCHHHHHHHHHHHHHHHCCCC--cCCccEEEEEeecCCCCcccH
Q 012353 18 CVQQEALEAHDGASKG-KYTIGLGQEC--MAFCSEVEDVISMSLTAVTNLLEKYKID--PKQIGRLEVGSETVIDKSKSI 92 (465)
Q Consensus 18 ~v~~~~l~~~~g~~~~-k~~~Gig~r~--~av~~~~Ed~~~la~~Aa~~aL~~agi~--~~~Id~li~~T~s~~~~~ps~ 92 (465)
.|..++.++..+.++- ++ .|.+... ..+...+.........|++++++++|++ ++|||.+.+..+.+ ..
T Consensus 216 vl~s~e~a~~l~~~~~~~I-~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~F~-----~~ 289 (386)
T PRK08313 216 VIGDEEAADAAAGRPVAWI-HGTAMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVPFS-----WF 289 (386)
T ss_pred EEecHHHHHhcCCCCCeEE-EEEEEEecCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccCCh-----HH
Confidence 3455566655554444 44 3444321 1111111122344558999999999997 69999998743322 22
Q ss_pred HHHHHHHhcc
Q 012353 93 KTFLMQIFEK 102 (465)
Q Consensus 93 a~~l~~~LGl 102 (465)
.-...+.||+
T Consensus 290 ~~~~~e~lGl 299 (386)
T PRK08313 290 EPMWLENLGF 299 (386)
T ss_pred HHHHHHHcCC
Confidence 3334566665
No 220
>PRK07855 lipid-transfer protein; Provisional
Probab=53.47 E-value=19 Score=37.27 Aligned_cols=41 Identities=7% Similarity=0.011 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcc
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
...|++++++++|++++|||.+.+.-+. +...-...+.||+
T Consensus 268 ~~~aa~~a~~~AGi~~~DiDv~El~D~F-----t~~~l~~~E~lG~ 308 (386)
T PRK07855 268 MGLVARQLWAQSGLGPADIDTAILYDHF-----TPFVLMQLEELGF 308 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEeccCC-----cHHHHHHHHHcCC
Confidence 3479999999999999999999864332 2223334456665
No 221
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=52.64 E-value=56 Score=33.87 Aligned_cols=48 Identities=17% Similarity=0.271 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEEE-EeecCCCCcccHHHHHHHHhcc
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLEV-GSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li~-~T~s~~~~~ps~a~~l~~~LGl 102 (465)
......|++++|+++|++++|||.+.. +|.|+.- ...-...|...||.
T Consensus 278 ~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~-d~~E~~al~~~~~~ 326 (424)
T smart00825 278 GPAQARLIRQALARAGVDPADVDYVEAHGTGTPLG-DPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCC-CHHHHHHHHHHHhc
Confidence 344567899999999999999999874 4555431 23344567777764
No 222
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=51.96 E-value=46 Score=35.02 Aligned_cols=47 Identities=15% Similarity=0.274 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEE-EeecCCCCcccHHHHHHHHhcc
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEV-GSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~-~T~s~~~~~ps~a~~l~~~LGl 102 (465)
.-...|++++|+++|++|++||.|.. +|.|+.. -+.-...+.+.+|-
T Consensus 299 ~~~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~-D~~E~~ai~~~~~~ 346 (437)
T PLN02836 299 RGAVLAMTRALQQSGLHPNQVDYVNAHATSTPLG-DAVEARAIKTVFSE 346 (437)
T ss_pred HHHHHHHHHHHHHcCCCHhHcCEEEccCCcCcCc-CHHHHHHHHHHhcc
Confidence 33567899999999999999999974 4555432 33445557777763
No 223
>PRK09604 UGMP family protein; Validated
Probab=51.80 E-value=53 Score=33.19 Aligned_cols=30 Identities=10% Similarity=0.181 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCccEEEEEe
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~Id~li~~T 82 (465)
-.+......+++|+++++++++||.|.++.
T Consensus 51 H~~~l~~~i~~~L~~~~~~~~did~iavt~ 80 (332)
T PRK09604 51 HVENIVPLIEEALKEAGLTLEDIDAIAVTA 80 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 356667788999999999999999998754
No 224
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=51.27 E-value=76 Score=32.81 Aligned_cols=27 Identities=19% Similarity=0.348 Sum_probs=24.6
Q ss_pred CCCCCCCceeeccCCchHHHHHHHHHh
Q 012353 235 QFSLSNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 235 ~~~~~did~~~~H~p~~km~~~~~~~L 261 (465)
|++++|||++=+|-+|.-+.-...+.|
T Consensus 294 Gi~p~DId~~Ei~daFa~~~l~~~e~l 320 (385)
T TIGR02445 294 GLSISDIDVFELNEAFAAQALPCLKDL 320 (385)
T ss_pred CCCHHHcCEEEEccccHHHHHHHHHHc
Confidence 799999999999999999888888877
No 225
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=50.85 E-value=57 Score=33.96 Aligned_cols=36 Identities=17% Similarity=0.179 Sum_probs=27.1
Q ss_pred HHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHh
Q 012353 220 CYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L 261 (465)
+.+..+++. +++++|||++=.|-+|.-+.-...+.|
T Consensus 308 a~~~al~~A------gi~~~did~~ei~d~f~~~~l~~le~l 343 (406)
T PRK07851 308 ASKQALARA------GMSIDDIDLVEINEAFAAQVLPSAREL 343 (406)
T ss_pred HHHHHHHHh------CCCHHHCCeehhhhHHHHHHHHHHHHh
Confidence 444444544 789999999999999988777666666
No 226
>PLN03172 chalcone synthase family protein; Provisional
Probab=50.73 E-value=85 Score=32.58 Aligned_cols=30 Identities=13% Similarity=-0.063 Sum_probs=18.9
Q ss_pred hcCCCCCCCCceeeccC----CchHHHHHHHHHh
Q 012353 232 EGKQFSLSNADYFVFHS----PYNKLVQKSFARL 261 (465)
Q Consensus 232 ~~~~~~~~did~~~~H~----p~~km~~~~~~~L 261 (465)
+++|+.++|||++++.+ ..+.+--.+.++|
T Consensus 115 ~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~L 148 (393)
T PLN03172 115 KEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLL 148 (393)
T ss_pred HHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHh
Confidence 34589999999987544 2344444455555
No 227
>PRK08256 lipid-transfer protein; Provisional
Probab=49.02 E-value=47 Score=34.32 Aligned_cols=41 Identities=15% Similarity=0.180 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcc
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
...|++++++++|++++|||.+.+.-. .+...-...+.||+
T Consensus 266 ~~~a~~~a~~~ag~~~~DiD~~ei~d~-----f~~~~l~~le~lg~ 306 (391)
T PRK08256 266 TRAAAQQVYEQAGIGPEDIDVVELHDC-----FSANELLTYEALGL 306 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeeccC-----CcHHHHHHHHHcCC
Confidence 457999999999999999999986322 22333445566776
No 228
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=48.97 E-value=50 Score=33.54 Aligned_cols=82 Identities=11% Similarity=0.019 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHC--CCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCce----eE-eec-CcChhHHHHHHH
Q 012353 55 SMSLTAVTNLLEKY--KIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE----GV-DST-NACYGGTAALFN 126 (465)
Q Consensus 55 ~la~~Aa~~aL~~a--gi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~----~~-di~-~aC~gg~~AL~~ 126 (465)
....++++++|+++ |++++|||.+++..-+. .+-..+.+.||+. ..++. .+ +++ .++++-..+|..
T Consensus 259 ~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~~-----~i~~~v~~~lgl~-~~~~~~s~~~l~~~GN~~sasi~~~L~~ 332 (361)
T cd00831 259 KNLERVLRKLLARLGIGLFKLAFDHWCVHPGGR-----AVLDAVEKALGLS-PEDLEASRMVLRRYGNMSSSSVLYVLAY 332 (361)
T ss_pred HHHHHHHHHHhccccCCCccccceEEEECCCCh-----HHHHHHHHHcCCC-HHHHHHHHHHHHHhCCchhccHHHHHHH
Confidence 34556788999999 99999999998754332 3344688889972 12221 12 222 233444444444
Q ss_pred HHHHHHcCC-CCCCEEEEEE
Q 012353 127 CVNWVESSS-WDGRYGLVVC 145 (465)
Q Consensus 127 A~~~l~sg~-~~~~~aLVVa 145 (465)
+ ++.+. .+|+++|+++
T Consensus 333 ~---~~~g~~~~Gd~vll~~ 349 (361)
T cd00831 333 M---EAKGRVKRGDRGLLIA 349 (361)
T ss_pred H---HHhCCCCCCCEEEEEE
Confidence 3 44443 2678888887
No 229
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=48.02 E-value=33 Score=35.55 Aligned_cols=63 Identities=14% Similarity=-0.000 Sum_probs=35.7
Q ss_pred eechHHHHHhcCCChhhhhhhhcCe--EEecCCCCCCH-HHHHHHHHHHHHHHCCCCc--CCccEEEEEe
Q 012353 18 CVQQEALEAHDGASKGKYTIGLGQE--CMAFCSEVEDV-ISMSLTAVTNLLEKYKIDP--KQIGRLEVGS 82 (465)
Q Consensus 18 ~v~~~~l~~~~g~~~~k~~~Gig~r--~~av~~~~Ed~-~~la~~Aa~~aL~~agi~~--~~Id~li~~T 82 (465)
.|..+|.++..+.++-++ .|.+.. ...... .+.. ......|++++++++|+++ +|||.+.+.-
T Consensus 224 vl~s~e~A~~l~~~~v~I-~g~~~~~~~~~~~~-~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D 291 (392)
T PRK06065 224 VLASEDLARRYTDTPVWV-EGVGWTLDNTEWPN-RDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYD 291 (392)
T ss_pred EEeCHHHHHhcCCCCEEE-EEEEEecCcccccc-ccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecC
Confidence 345556666555555444 233321 111111 1111 2223579999999999985 9999998743
No 230
>PLN03168 chalcone synthase; Provisional
Probab=47.51 E-value=91 Score=32.27 Aligned_cols=17 Identities=18% Similarity=0.040 Sum_probs=13.9
Q ss_pred hcCCCCCCCCceeeccC
Q 012353 232 EGKQFSLSNADYFVFHS 248 (465)
Q Consensus 232 ~~~~~~~~did~~~~H~ 248 (465)
+++|+.++|||++|+.+
T Consensus 114 ~~ag~~~~dId~lI~~T 130 (389)
T PLN03168 114 KEWGGRKSDITHIVFAT 130 (389)
T ss_pred HHcCCCHHHCCEEEEEC
Confidence 44589999999998765
No 231
>PLN03173 chalcone synthase; Provisional
Probab=46.72 E-value=1e+02 Score=31.93 Aligned_cols=17 Identities=18% Similarity=0.085 Sum_probs=13.4
Q ss_pred hcCCCCCCCCceeeccC
Q 012353 232 EGKQFSLSNADYFVFHS 248 (465)
Q Consensus 232 ~~~~~~~~did~~~~H~ 248 (465)
+++|+.++|||++++.+
T Consensus 115 ~~ag~~~~dId~li~~t 131 (391)
T PLN03173 115 KEWGQPKSKITHLVFCT 131 (391)
T ss_pred HHcCCCHHHCCEEEEEc
Confidence 44589999999987764
No 232
>PRK06059 lipid-transfer protein; Provisional
Probab=45.84 E-value=1.1e+02 Score=31.70 Aligned_cols=38 Identities=5% Similarity=-0.074 Sum_probs=29.4
Q ss_pred HHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhh
Q 012353 219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLL 262 (465)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~ 262 (465)
.+.+.+.++. |++++|||.+-+|-+|.-+.-...+.|.
T Consensus 277 ~a~~~a~~~a------gl~~~Did~~El~d~f~~~~l~~~e~lG 314 (399)
T PRK06059 277 QILDAAYAEA------GIGPEDLSLAEVYDLSTALELDWYEHLG 314 (399)
T ss_pred HHHHHHHHHc------CCCHHHCcEEeecccChHHHHHHHHHcC
Confidence 3444454544 7999999999999999988877777773
No 233
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=44.88 E-value=33 Score=35.94 Aligned_cols=45 Identities=22% Similarity=0.292 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEE-EeecCCCCcccHHHHHHHHhcc
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEV-GSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~-~T~s~~~~~ps~a~~l~~~LGl 102 (465)
...|.+++|+++|++|++||.|.. +|.|+. ..+.-..-|.+.+|.
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~-~d~~E~~al~~~~~~ 336 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPE-NDKMEYLGLSAVFGE 336 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcc-hHHHHHHHHHHHhcc
Confidence 557889999999999999999884 454443 234445556666763
No 234
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=44.22 E-value=72 Score=32.89 Aligned_cols=48 Identities=17% Similarity=0.239 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEEE-EeecCCCCcccHHHHHHHHhcc
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLEV-GSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li~-~T~s~~~~~ps~a~~l~~~LGl 102 (465)
..-...|++++|+++|++++|||.+.. +|.|+.- .+.-...|...++.
T Consensus 278 ~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~-D~~E~~al~~~f~~ 326 (421)
T cd00833 278 GEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLG-DPIEVEALAKVFGG 326 (421)
T ss_pred HHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCC-CHHHHHHHHHHHhc
Confidence 445568999999999999999999874 4444322 23344567777763
No 235
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=43.11 E-value=80 Score=31.20 Aligned_cols=87 Identities=13% Similarity=0.053 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCce-----eEeecCcChhHHHHHHHH
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE-----GVDSTNACYGGTAALFNC 127 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~-----~~di~~aC~gg~~AL~~A 127 (465)
......++++++|++.+++ ++|+.++...-+. +..-..+.+.|++. ..++. .++--..|+++..-+.++
T Consensus 221 ~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~----~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~Gn~~sa~~~~~L~ 294 (324)
T cd00827 221 AHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG----KKILEAVAKKLGGP-PEKASQTRWILLRRVGNMYAASILLGLA 294 (324)
T ss_pred HhHHHHHHHHHHHHHcccc-cccceeeccCchH----HHHHHHHHHHccch-HhhhccchhhHHHHhCchHHHHHHHHHH
Confidence 4566678888999999999 9999888644333 14455678888851 11221 122223333333333333
Q ss_pred HHHHHcCC-CCCCEEEEEEe
Q 012353 128 VNWVESSS-WDGRYGLVVCT 146 (465)
Q Consensus 128 ~~~l~sg~-~~~~~aLVVas 146 (465)
.. ++.+. .+|+++|+++.
T Consensus 295 ~~-~~~~~~~~Gd~vl~~~~ 313 (324)
T cd00827 295 SL-LESGKLKAGDRVLLFSY 313 (324)
T ss_pred HH-HhcCCCCCCCEEEEEEe
Confidence 32 34442 26788988874
No 236
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=43.01 E-value=59 Score=33.72 Aligned_cols=27 Identities=11% Similarity=0.205 Sum_probs=20.6
Q ss_pred CCCCCCCceeeccCCchHHHHHHHHHh
Q 012353 235 QFSLSNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 235 ~~~~~did~~~~H~p~~km~~~~~~~L 261 (465)
|++++|||++-.|-+|.-..-...+.|
T Consensus 304 gl~~~Did~~ei~eafa~~~l~~~e~l 330 (392)
T PRK07108 304 GLKVDDIDLWELNEAFAVQVLYCRDTL 330 (392)
T ss_pred CCCHHHcCchHhhhHHHHHHHHHHHhc
Confidence 799999999999988876554444444
No 237
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=42.65 E-value=30 Score=35.16 Aligned_cols=83 Identities=18% Similarity=0.246 Sum_probs=48.2
Q ss_pred eechHHHHHhc--CCCh--hhhhhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccH
Q 012353 18 CVQQEALEAHD--GASK--GKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSI 92 (465)
Q Consensus 18 ~v~~~~l~~~~--g~~~--~k~~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~ 92 (465)
.+-.|+|+.+. |... +-.--|+-...+.+..|+.|- .=|+.|.+++|+++|+.|++||.|= ++|+|+.- -..-
T Consensus 261 vlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG-~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~G-D~aE 338 (440)
T KOG1394|consen 261 VLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDG-AGAVLAMERALKDAGLSPEDIDYVNAHATSTPLG-DAAE 338 (440)
T ss_pred EEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCc-chHHHHHHHHHHHcCCChhhcCeeecccccCcCc-hHHH
Confidence 45567776553 3221 111123333333333444442 2244566788999999999999985 77888753 2244
Q ss_pred HHHHHHHhcc
Q 012353 93 KTFLMQIFEK 102 (465)
Q Consensus 93 a~~l~~~LGl 102 (465)
+..|.+.|+.
T Consensus 339 ~~Ai~~vf~~ 348 (440)
T KOG1394|consen 339 AEAIKRVFGE 348 (440)
T ss_pred HHHHHHHhcc
Confidence 5568888875
No 238
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=42.48 E-value=96 Score=29.62 Aligned_cols=34 Identities=21% Similarity=0.073 Sum_probs=20.1
Q ss_pred ccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEe
Q 012353 323 QVGNMYTASLYAALASLIHNKHSELDGKRVVLFSY 357 (465)
Q Consensus 323 ~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~sy 357 (465)
-++-||++.-..+|..+-+-. +..+|.+|++++.
T Consensus 156 ~i~~~GC~gg~~~L~~A~~~~-~~~p~a~VLvv~v 189 (226)
T PF00195_consen 156 PIFGMGCAGGAAGLRRAKDIA-RANPGARVLVVCV 189 (226)
T ss_dssp EEES-GGGHHHHHHHHHHHHH-HHSTT-EEEEEEE
T ss_pred EEeccchhhHHHHHHHHHHHH-hCCccceEEEEEE
Confidence 457777777777775443321 1258999999764
No 239
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=40.61 E-value=35 Score=29.09 Aligned_cols=50 Identities=12% Similarity=0.112 Sum_probs=28.7
Q ss_pred HHHHHHHHHCCCCcCCccEEEEEeecCCCC--cccHHHHHHHHh-cccCCCCceeEeecC
Q 012353 59 TAVTNLLEKYKIDPKQIGRLEVGSETVIDK--SKSIKTFLMQIF-EKFGNTDIEGVDSTN 115 (465)
Q Consensus 59 ~Aa~~aL~~agi~~~~Id~li~~T~s~~~~--~ps~a~~l~~~L-Gl~g~~~~~~~di~~ 115 (465)
+-...++++++++++||-.|+| |.|++-. .|+.+ .+.+ |. .+++.+..+.
T Consensus 24 eLl~~i~~~N~l~~~dIvSi~F-T~T~DL~a~fPA~a---~R~~~g~---~~Vpl~c~~E 76 (118)
T PF07736_consen 24 ELLEEILERNELSPEDIVSIIF-TVTPDLDAAFPAAA---ARELPGW---DDVPLMCAQE 76 (118)
T ss_dssp HHHHHHHHHTT--GGGEEEEEE-EE-TT--SS-TCHH---HHHTTTG---TTSEEEEEE-
T ss_pred HHHHHHHHHcCCCHHHEEEEEE-EeCCCcCccChHHH---HHccCCC---CccceeccCc
Confidence 3345566788999999999987 5565432 34433 4455 64 6777776653
No 240
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=39.97 E-value=48 Score=28.20 Aligned_cols=51 Identities=10% Similarity=0.060 Sum_probs=33.1
Q ss_pred HHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecC
Q 012353 61 VTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTN 115 (465)
Q Consensus 61 a~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~ 115 (465)
...++++.+++++||--|+| |.|++-.+ ..-+..++.+|. ..+++.++.+.
T Consensus 26 l~~i~~~N~l~~edivSv~F-T~T~DL~a-~FPA~aaR~~~~--~~~Vplmc~qE 76 (117)
T cd02185 26 LEEIIERNNIKPEDIISVIF-TVTPDLDA-AFPAKAARELGG--WKYVPLMCAQE 76 (117)
T ss_pred HHHHHHHcCCCHHHEEEEEE-EeCCcccc-cChHHHHHhcCC--CCCcceeecCc
Confidence 44556788999999999988 55554322 233455677753 46777776654
No 241
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=39.88 E-value=1.5e+02 Score=30.71 Aligned_cols=27 Identities=19% Similarity=0.335 Sum_probs=24.7
Q ss_pred CCCCCCCceeeccCCchHHHHHHHHHh
Q 012353 235 QFSLSNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 235 ~~~~~did~~~~H~p~~km~~~~~~~L 261 (465)
|++++|||++=+|-+|.-+.-...+.|
T Consensus 296 gl~~~DId~~El~d~F~~~~l~~~e~l 322 (387)
T PRK08947 296 GLSISDIDVFELNEAFAAQSLPCLKDL 322 (387)
T ss_pred CCCHHHCCEEEecccchHHHHHHHHHc
Confidence 789999999999999999888888877
No 242
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=39.22 E-value=1.1e+02 Score=30.58 Aligned_cols=59 Identities=8% Similarity=0.030 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST 114 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~ 114 (465)
........+++|+++|++++|||.|.++..=+....--++...++-|.. .-+++.+.++
T Consensus 49 ~~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tglrvg~~~Ak~la~--~~~~p~~~v~ 107 (305)
T TIGR00329 49 AENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGSLRVGATFARSLAL--SLDKPLIGVN 107 (305)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhhHHHHHHHHHHHHH--HhCCCEeecc
Confidence 4555667899999999999999999885433322222233334444433 2234444443
No 243
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=38.93 E-value=1.1e+02 Score=31.70 Aligned_cols=18 Identities=6% Similarity=0.287 Sum_probs=15.6
Q ss_pred CCCCCCCceeeccCCchH
Q 012353 235 QFSLSNADYFVFHSPYNK 252 (465)
Q Consensus 235 ~~~~~did~~~~H~p~~k 252 (465)
|++++|||++-.|-+|.-
T Consensus 304 Gl~p~DID~~ei~dafa~ 321 (392)
T PRK06633 304 GWSVNDLEVIEVNEAFAA 321 (392)
T ss_pred CCCHHHcCeeehhhHHHH
Confidence 799999999999977754
No 244
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=38.41 E-value=1.4e+02 Score=29.75 Aligned_cols=38 Identities=21% Similarity=0.145 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhhhhhcCCCCCCCCceeeccC----CchHHHHHHHHHh
Q 012353 218 DTCYKCLCSKYEKLEGKQFSLSNADYFVFHS----PYNKLVQKSFARL 261 (465)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~did~~~~H~----p~~km~~~~~~~L 261 (465)
-.++++++++. |+.++|||.+|... |.+.+..-+..++
T Consensus 88 f~av~~LL~kt------gv~p~dIdiLVvncs~f~ptPSLsamIvnr~ 129 (290)
T PF08392_consen 88 FGAVDDLLAKT------GVKPSDIDILVVNCSLFNPTPSLSAMIVNRY 129 (290)
T ss_pred HHHHHHHHHHc------CCCHHHCCEEEEECcCCCcCCcHHHHHHHHh
Confidence 34555555554 89999999987543 6666666666666
No 245
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=37.81 E-value=34 Score=32.17 Aligned_cols=70 Identities=17% Similarity=0.205 Sum_probs=38.2
Q ss_pred hHHHHHHhhhhhhhhhccCCCccc---ccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeE
Q 012353 297 DLEKVSQQLAKPLYDAKVQPSTLI---PKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFS 367 (465)
Q Consensus 297 ~~~k~~~~~~~~~~~~~~~~s~~~---~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~ 367 (465)
.+..++..+..+.|-..-....-| +-.+|+-.+-|.|...+.+++. =.+++|++|+=.+-|||+.+..+.
T Consensus 19 ~v~~A~~~VpR~~Fvp~~~~~~aY~d~~l~i~~~~~is~P~~~a~~l~~-L~l~pg~~VLeIGtGsGY~aAlla 91 (209)
T PF01135_consen 19 RVLDAFRAVPREDFVPPAFRDLAYEDRPLPIGCGQTISAPSMVARMLEA-LDLKPGDRVLEIGTGSGYQAALLA 91 (209)
T ss_dssp HHHHHHHHS-GGGCSSCGGGGGTTSSS-EEEETTEEE--HHHHHHHHHH-TTC-TT-EEEEES-TTSHHHHHHH
T ss_pred HHHHHHHhCCHHHhCchhhhcCCCCCCCeeecceeechHHHHHHHHHHH-HhcCCCCEEEEecCCCcHHHHHHH
Confidence 344555555555554331111111 1234554666777777777776 357899999999999999876654
No 246
>PLN02377 3-ketoacyl-CoA synthase
Probab=36.89 E-value=1.8e+02 Score=31.36 Aligned_cols=30 Identities=10% Similarity=0.164 Sum_probs=20.3
Q ss_pred hcCCCCCCCCceeeccC----CchHHHHHHHHHh
Q 012353 232 EGKQFSLSNADYFVFHS----PYNKLVQKSFARL 261 (465)
Q Consensus 232 ~~~~~~~~did~~~~H~----p~~km~~~~~~~L 261 (465)
+++|++++|||.+++.. |.+.+.-.+.++|
T Consensus 185 ~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~L 218 (502)
T PLN02377 185 ANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKY 218 (502)
T ss_pred HHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHh
Confidence 34589999999998822 3455555666666
No 247
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=34.81 E-value=1.3e+02 Score=30.09 Aligned_cols=31 Identities=10% Similarity=0.111 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCccEEEEEee
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSE 83 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~Id~li~~T~ 83 (465)
-.+......+++|++++++.++||.|.++.-
T Consensus 49 H~~~l~~~i~~~l~~~~~~~~~id~iav~~G 79 (314)
T TIGR03723 49 HLEAIPPLIEEALAEAGLTLSDIDAIAVTAG 79 (314)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecC
Confidence 3455667789999999999999999998543
No 248
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=33.60 E-value=64 Score=27.43 Aligned_cols=50 Identities=14% Similarity=0.141 Sum_probs=31.8
Q ss_pred HHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHh-cccCCCCceeEeecC
Q 012353 61 VTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIF-EKFGNTDIEGVDSTN 115 (465)
Q Consensus 61 a~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~L-Gl~g~~~~~~~di~~ 115 (465)
...++++.+++++||--++| |.|++-.+ ..-+..++.+ |. .+++.++.++
T Consensus 26 l~~ii~~N~l~~edivSv~F-T~T~DL~a-~FPA~aaR~~~Gw---~~Vplmc~qE 76 (117)
T TIGR01796 26 LTELMERNELTPEDLISVIF-TVTEDLHA-DFPAAAARGLPGW---TDVPVMCAQE 76 (117)
T ss_pred HHHHHHHcCCCHHHEEEEEE-EecCcccc-cChHHHHHhccCC---CCcceeccCc
Confidence 34556788999999999888 55554322 2223445566 75 6777776653
No 249
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=33.50 E-value=51 Score=32.15 Aligned_cols=31 Identities=19% Similarity=0.294 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEEEEeec
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSET 84 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li~~T~s 84 (465)
.+|...|++++.++.|+.|+||+.|...-+.
T Consensus 271 fdm~~~aa~~l~aksgltpndvqvielhdcf 301 (408)
T KOG1406|consen 271 FDMTRLAAKRLFAKSGLTPNDVQVIELHDCF 301 (408)
T ss_pred chHHHHHHHHHHHHcCCCcccceEEEeeccc
Confidence 5889999999999999999999999876554
No 250
>PLN00415 3-ketoacyl-CoA synthase
Probab=32.99 E-value=1.6e+02 Score=31.29 Aligned_cols=28 Identities=14% Similarity=0.235 Sum_probs=17.6
Q ss_pred CCCCCCCCceeeccC----CchHHHHHHHHHh
Q 012353 234 KQFSLSNADYFVFHS----PYNKLVQKSFARL 261 (465)
Q Consensus 234 ~~~~~~did~~~~H~----p~~km~~~~~~~L 261 (465)
+|++++|||+++... +.+.+--.+..++
T Consensus 149 aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~L 180 (466)
T PLN00415 149 TGIEPREVGIFIVNCSLFNPNPSLSSMIVNRY 180 (466)
T ss_pred cCCCHHHCCEEEEECcCCCCCchHHHHHHHHh
Confidence 389999999988543 3344444444444
No 251
>cd01458 vWA_ku Ku70/Ku80 N-terminal domain. The Ku78 heterodimer (composed of Ku70 and Ku80) contributes to genomic integrity through its ability to bind DNA double-strand breaks (DSB) in a preferred orientation. DSB's are repaired by either homologues recombination or non-homologues end joining and facilitate repair by the non-homologous end-joining pathway (NHEJ). The Ku heterodimer is required for accurate process that tends to preserve the sequence at the junction. Ku78 is found in all three kingdoms of life. However, only the eukaryotic proteins have a vWA domain fused to them at their N-termini. The vWA domain is not involved in DNA binding but may very likey mediate Ku78's interactions with other proteins. Members of this subgroup lack the conserved MIDAS motif.
Probab=32.82 E-value=2.8e+02 Score=25.75 Aligned_cols=97 Identities=11% Similarity=0.135 Sum_probs=57.6
Q ss_pred CCHHHHHHHHHHHHHHHC--CCCcCCccEEEEEeecCCC------------CcccHHHHHHHHhcccCCCCceeEee---
Q 012353 51 EDVISMSLTAVTNLLEKY--KIDPKQIGRLEVGSETVID------------KSKSIKTFLMQIFEKFGNTDIEGVDS--- 113 (465)
Q Consensus 51 Ed~~~la~~Aa~~aL~~a--gi~~~~Id~li~~T~s~~~------------~~ps~a~~l~~~LGl~g~~~~~~~di--- 113 (465)
.+..++|..++.+++++- .-+-+.|++|+++|..... ........|...+.+. .+....+..
T Consensus 23 ~s~l~~a~~~i~~~~~~ki~~~~~D~vGlilf~t~~~~~~~~~~~i~v~~~l~~~~~~~l~~l~~~~-~~~~~~~~~~~~ 101 (218)
T cd01458 23 ESPFEEALKCIRQLMKSKIISSPKDLVGVVFYGTEESKNPVGYENIYVLLDLDTPGAERVEDLKELI-EPGGLSFAGQVG 101 (218)
T ss_pred CChHHHHHHHHHHHHHhceeCCCCCeEEEEEEcccCCCCcCCCCceEEeecCCCCCHHHHHHHHHHh-hcchhhhcccCC
Confidence 578999999999999862 2344689999999874111 1123344555555541 111111111
Q ss_pred cCcChhHHHHHHHHHHHHHcCC-CCCCEEEEEEecc
Q 012353 114 TNACYGGTAALFNCVNWVESSS-WDGRYGLVVCTDS 148 (465)
Q Consensus 114 ~~aC~gg~~AL~~A~~~l~sg~-~~~~~aLVVasD~ 148 (465)
.........||..|..++..+. ....+.+|+-+|-
T Consensus 102 ~~~~~~l~~aL~~a~~~~~~~~~~~~~k~IvL~TDg 137 (218)
T cd01458 102 DSGQVSLSDALWVCLDLFSKGKKKKSHKRIFLFTNN 137 (218)
T ss_pred CCCCccHHHHHHHHHHHHHhccccccccEEEEECCC
Confidence 1234567789999999998621 0125666666663
No 252
>PLN02932 3-ketoacyl-CoA synthase
Probab=32.21 E-value=2.2e+02 Score=30.44 Aligned_cols=30 Identities=20% Similarity=0.236 Sum_probs=20.0
Q ss_pred hcCCCCCCCCceeeccC----CchHHHHHHHHHh
Q 012353 232 EGKQFSLSNADYFVFHS----PYNKLVQKSFARL 261 (465)
Q Consensus 232 ~~~~~~~~did~~~~H~----p~~km~~~~~~~L 261 (465)
+++|++++|||.+|... |.+.+.-.+.++|
T Consensus 161 ~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~l 194 (478)
T PLN02932 161 RNTGISPSDIGILVVNSSTFNPTPSLSSILVNKF 194 (478)
T ss_pred HHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHh
Confidence 34589999999997543 4555555555555
No 253
>PLN03170 chalcone synthase; Provisional
Probab=31.34 E-value=2.1e+02 Score=29.72 Aligned_cols=30 Identities=13% Similarity=-0.067 Sum_probs=18.7
Q ss_pred hcCCCCCCCCceeeccC--C--chHHHHHHHHHh
Q 012353 232 EGKQFSLSNADYFVFHS--P--YNKLVQKSFARL 261 (465)
Q Consensus 232 ~~~~~~~~did~~~~H~--p--~~km~~~~~~~L 261 (465)
+++|+.++|||++++-+ + .+.+--.+.++|
T Consensus 119 ~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~L 152 (401)
T PLN03170 119 KEWGQPKSKITHLVFCTTSGVDMPGADYQLTKML 152 (401)
T ss_pred HHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHh
Confidence 44589999999987533 2 334444455555
No 254
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=31.18 E-value=1.7e+02 Score=29.74 Aligned_cols=43 Identities=14% Similarity=0.121 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcc
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
.....+.+++|+++|++++|||.+++..- .+.+--.+.++||+
T Consensus 242 ~~~~~~i~~~L~~~gl~~~did~~v~HQ~-----~~~i~~~i~~~Lgl 284 (353)
T PRK12880 242 ECEPKSFKEILEFSKVDEKDIAFHLFHQS-----NAYLVDCIKEELKL 284 (353)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHhCC
Confidence 33445788999999999999999997432 33445578999998
No 255
>PLN02192 3-ketoacyl-CoA synthase
Probab=31.13 E-value=2.5e+02 Score=30.31 Aligned_cols=29 Identities=7% Similarity=0.139 Sum_probs=19.9
Q ss_pred cCCCCCCCCceeecc----CCchHHHHHHHHHh
Q 012353 233 GKQFSLSNADYFVFH----SPYNKLVQKSFARL 261 (465)
Q Consensus 233 ~~~~~~~did~~~~H----~p~~km~~~~~~~L 261 (465)
++|++++|||.+|.. .|.+.+.-.+.+++
T Consensus 190 kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~l 222 (511)
T PLN02192 190 KTSVKPKDIGILIVNCSLFNPTPSLSAMVINHY 222 (511)
T ss_pred HcCCCHHHCCEEEEECCCCCCCchHHHHHHHHh
Confidence 348999999998854 34555555566655
No 256
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=30.28 E-value=2.3e+02 Score=29.83 Aligned_cols=27 Identities=11% Similarity=0.217 Sum_probs=23.9
Q ss_pred CCCCCCCceeeccCCchHHHHHHHHHh
Q 012353 235 QFSLSNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 235 ~~~~~did~~~~H~p~~km~~~~~~~L 261 (465)
|++++|||.+=+|-+|.-..-...+.|
T Consensus 325 gl~~~Did~~Ei~daFa~~~l~~~e~l 351 (430)
T TIGR02446 325 GLALSDLTLIDMHEAFAAQTLANVQMF 351 (430)
T ss_pred CCCHHHCCEEEeccccHHHHHHHHHHh
Confidence 799999999999999998877777766
No 257
>PLN02854 3-ketoacyl-CoA synthase
Probab=30.25 E-value=3.2e+02 Score=29.62 Aligned_cols=29 Identities=7% Similarity=0.093 Sum_probs=18.8
Q ss_pred cCCCCCCCCceeeccC----CchHHHHHHHHHh
Q 012353 233 GKQFSLSNADYFVFHS----PYNKLVQKSFARL 261 (465)
Q Consensus 233 ~~~~~~~did~~~~H~----p~~km~~~~~~~L 261 (465)
++|++++|||.+|... |.+.+.-.+.++|
T Consensus 202 kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~L 234 (521)
T PLN02854 202 KTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHY 234 (521)
T ss_pred HcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHh
Confidence 3489999999999732 3344444555555
No 258
>PRK14878 UGMP family protein; Provisional
Probab=28.85 E-value=1.9e+02 Score=29.11 Aligned_cols=26 Identities=23% Similarity=0.252 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEe
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGS 82 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T 82 (465)
-..+.+++|+++|++++|||.|.++.
T Consensus 48 l~~~i~~~l~~a~~~~~did~Iavt~ 73 (323)
T PRK14878 48 APELLRKALEKAGISIEDIDAVAVSQ 73 (323)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 34788999999999999999998754
No 259
>PRK08304 stage V sporulation protein AD; Validated
Probab=28.77 E-value=3.5e+02 Score=27.52 Aligned_cols=82 Identities=15% Similarity=0.135 Sum_probs=43.0
Q ss_pred HHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcc-----cCCCCceeEee-cC---------cChhHHHHHHHH
Q 012353 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK-----FGNTDIEGVDS-TN---------ACYGGTAALFNC 127 (465)
Q Consensus 63 ~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl-----~g~~~~~~~di-~~---------aC~gg~~AL~~A 127 (465)
+=|++.|.+|++-|+|+.|=-..+ ...+...|..+-|. +..+.+..||. ++ ||++-+.. -.-
T Consensus 216 ~h~~d~~~~~~~yDli~tGDlg~v--G~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v~~-~~~ 292 (337)
T PRK08304 216 QHFKDTGRSPEDYDLIVTGDLGRV--GREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVVTY-GYL 292 (337)
T ss_pred HHHHHcCCChhhccEEEEcchHHH--HHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHHHHH-HHH
Confidence 335678999999999996521111 11122222222232 00123456662 12 34332222 222
Q ss_pred HHHHHcCCCCCCEEEEEEeccc
Q 012353 128 VNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~ 149 (465)
...|+.|.+ +++|+|++-..
T Consensus 293 ~~~~~~g~~--~rvl~v~tGaL 312 (337)
T PRK08304 293 LKELQKGKL--KRVLVVATGAL 312 (337)
T ss_pred HHHHhcCCc--eEEEEEEchhh
Confidence 345678988 99999997654
No 260
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=28.24 E-value=1.2e+02 Score=31.47 Aligned_cols=28 Identities=14% Similarity=0.364 Sum_probs=23.6
Q ss_pred HHHHHHHHHHCCCCcCCccEEE-EEeecC
Q 012353 58 LTAVTNLLEKYKIDPKQIGRLE-VGSETV 85 (465)
Q Consensus 58 ~~Aa~~aL~~agi~~~~Id~li-~~T~s~ 85 (465)
.++++++|+++|++|+|||.|. ++|.|+
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~hgtgt~ 312 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPHGTGSP 312 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEccCCCCC
Confidence 5889999999999999999987 455554
No 261
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=28.20 E-value=1.2e+02 Score=30.52 Aligned_cols=82 Identities=17% Similarity=0.326 Sum_probs=50.7
Q ss_pred CCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhcc
Q 012353 235 QFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKV 314 (465)
Q Consensus 235 ~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~ 314 (465)
|+..+|+|+|=+.-.|.-......+.| +++++++..+
T Consensus 308 G~~~sdVd~~EiNEAFs~v~lA~iK~L------------------------gldP~kVNv~------------------- 344 (396)
T KOG1390|consen 308 GLEQSDVDYWEINEAFSVVVLANIKKL------------------------GLDPSKVNVH------------------- 344 (396)
T ss_pred CcchhhhhHHhhhhhhhHHHHHHHHHh------------------------CCCHhhccCC-------------------
Confidence 899999999988877776666665555 6666553211
Q ss_pred CCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEe--ccchheee
Q 012353 315 QPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSY--GSGLTATM 365 (465)
Q Consensus 315 ~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~sy--GsG~~~~~ 365 (465)
--...+.+-+| |+.+.+...|...|++ .|-++++.+. |.|.++++
T Consensus 345 GGAValGHPlG-~SGaRi~~tL~~~L~~-----~~g~~GvAaiCnGGGgasa~ 391 (396)
T KOG1390|consen 345 GGAVALGHPLG-MSGARILVTLLHTLEQ-----KGGKIGVAAICNGGGGASAM 391 (396)
T ss_pred CceeecCCCcC-CcchhHHHHHHHHHHh-----hCCceeEEEEecCCCceeeE
Confidence 00111233444 5567899999999887 2445555554 65554443
No 262
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=27.08 E-value=2.5e+02 Score=29.25 Aligned_cols=27 Identities=15% Similarity=0.285 Sum_probs=22.8
Q ss_pred CCCCCCCceeeccCCchHHHHHHHHHh
Q 012353 235 QFSLSNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 235 ~~~~~did~~~~H~p~~km~~~~~~~L 261 (465)
|++++|||.+=+|-+|.-..-...+.|
T Consensus 310 gl~~~did~~ei~d~Fa~~~l~~~e~l 336 (401)
T PRK08131 310 GLTLDDMDIIEINEAFASQVLGCLKGL 336 (401)
T ss_pred CCCHHHCCeehhccHHHHHHHHHHHHc
Confidence 789999999999999988766666666
No 263
>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family.
Probab=26.92 E-value=67 Score=29.28 Aligned_cols=38 Identities=32% Similarity=0.423 Sum_probs=30.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeec
Q 012353 47 CSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSET 84 (465)
Q Consensus 47 ~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s 84 (465)
+...+|+..=..+|.+++++..++++++|+.|.++|+.
T Consensus 29 ~Tt~~d~~~gi~~al~~l~~~~~~~~~~i~~v~~gTT~ 66 (176)
T PF05378_consen 29 PTTPDDPAEGILEALDALLEESGIDPSDIDRVRHGTTV 66 (176)
T ss_pred CCCCcCHHHHHHHHHHhhhcccCCChhhCcEEEeccHH
Confidence 34457888888888889999989999999999998843
No 264
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=26.20 E-value=1.3e+02 Score=28.49 Aligned_cols=60 Identities=12% Similarity=0.101 Sum_probs=41.2
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEe----ecCCCCcccHHHHHHHHhcccCCCCceeEeec
Q 012353 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGS----ETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST 114 (465)
Q Consensus 49 ~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T----~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~ 114 (465)
....-.+....+.+.+|.++++++.|||.|+|+. -|+.. ++.-+++-|.+ .-+++.+-++
T Consensus 33 ~~r~hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlR----IG~~~AkgLA~--~l~iplvgvs 96 (220)
T COG1214 33 LKRNHAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLR----IGVAFAKGLAL--ALNIPLVGVS 96 (220)
T ss_pred ccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchh----hHHHHHHHHHH--HcCCCEEEeC
Confidence 3455677888899999999999999999999863 34444 33334444444 3456666653
No 265
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=25.50 E-value=1.9e+02 Score=29.03 Aligned_cols=25 Identities=12% Similarity=0.194 Sum_probs=21.3
Q ss_pred HHHHHHHHHHCCCCcCCccEEEEEe
Q 012353 58 LTAVTNLLEKYKIDPKQIGRLEVGS 82 (465)
Q Consensus 58 ~~Aa~~aL~~agi~~~~Id~li~~T 82 (465)
..+.+++|+++|++++|||.|.++.
T Consensus 50 ~~~i~~~l~~~~~~~~did~Iavt~ 74 (322)
T TIGR03722 50 PKLIKEALEEAGVSLEDIDAVAFSQ 74 (322)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEec
Confidence 3448999999999999999998754
No 266
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=24.93 E-value=1.5e+02 Score=38.46 Aligned_cols=79 Identities=16% Similarity=0.172 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhcccCC--CCceeEee----cC-cChhHHHHHHHHH
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEKFGN--TDIEGVDS----TN-ACYGGTAALFNCV 128 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LGl~g~--~~~~~~di----~~-aC~gg~~AL~~A~ 128 (465)
-.++.+++|+++|++|++||.|. +||.|+.- -|.-...|.+.||.... ..+..-.+ ++ -+++|+.+|..+.
T Consensus 317 q~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~g-D~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~ 395 (2582)
T TIGR02813 317 QAKALKRAYDDAGFAPHTCGLIEAHGTGTAAG-DVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAV 395 (2582)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCCCCCCC-CHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHH
Confidence 36889999999999999999997 55666542 34556668888874110 12332222 22 4556666666666
Q ss_pred HHHHcCCC
Q 012353 129 NWVESSSW 136 (465)
Q Consensus 129 ~~l~sg~~ 136 (465)
-.++.+..
T Consensus 396 lal~~~~i 403 (2582)
T TIGR02813 396 LALHHKVL 403 (2582)
T ss_pred HHHhcCCc
Confidence 66666644
No 267
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=24.91 E-value=99 Score=29.62 Aligned_cols=61 Identities=16% Similarity=0.164 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcc-cHHHHHHHHhcccCCCCceeEeecCcChh
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSK-SIKTFLMQIFEKFGNTDIEGVDSTNACYG 119 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~p-s~a~~l~~~LGl~g~~~~~~~di~~aC~g 119 (465)
.-...-++.+|++++++.+|||.+.+ |--|-.-.| +..+.+++-|-++ .+.+.+.+ |-|-|
T Consensus 51 ~~il~Lv~~al~ea~v~~~diD~icy-TKGPGmgaPL~~vaivaRtlsll--w~kPlv~V-NHCig 112 (336)
T KOG2708|consen 51 AWILGLVKQALEEAGVTSDDIDCICY-TKGPGMGAPLSVVAIVARTLSLL--WNKPLVGV-NHCIG 112 (336)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEE-cCCCCCCCchhhHHHHHHHHHHH--hCCCcccc-hhhhh
Confidence 34445578889999999999999876 555555455 3344566666652 34343333 45654
No 268
>PLN03171 chalcone synthase-like protein; Provisional
Probab=24.31 E-value=4.1e+02 Score=27.56 Aligned_cols=16 Identities=6% Similarity=-0.076 Sum_probs=12.8
Q ss_pred hcCCCCCCCCceeecc
Q 012353 232 EGKQFSLSNADYFVFH 247 (465)
Q Consensus 232 ~~~~~~~~did~~~~H 247 (465)
+++++.++|||++++.
T Consensus 121 ~~ag~~~~dId~li~~ 136 (399)
T PLN03171 121 AEWGRPAADITHLVVT 136 (399)
T ss_pred HHcCCCHHHCCEEEEE
Confidence 3458999999999873
No 269
>cd01452 VWA_26S_proteasome_subunit 26S proteasome plays a major role in eukaryotic protein breakdown, especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes, often using covalent modification of proteins by ubiquitylation. It consists of a 20S proteolytic core particle (CP) and a 19S regulatory particle (RP). The CP is an ATP independent peptidase consisting of hydrolyzing activities. One or both ends of CP carry the RP that confers both ubiquitin and ATP dependence to the 26S proteosome. The RP's proposed functions include recognition of substrates and translocation of these to CP for proteolysis. The RP can dissociate into a stable lid and base subcomplexes. The base is composed of three non-ATPase subunits (Rpn 1, 2 and 10). A single residue in the vWA domain of Rpn10 has been implicated to be responsible for stabilizing the lid-base association.
Probab=22.55 E-value=2.3e+02 Score=26.15 Aligned_cols=86 Identities=5% Similarity=-0.045 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHHHH----HHCCCCcCCccEEEEEeecCCCCcccHHH--HHHHHhcccCCCCceeEeecCcChhHHHHHH
Q 012353 52 DVISMSLTAVTNLL----EKYKIDPKQIGRLEVGSETVIDKSKSIKT--FLMQIFEKFGNTDIEGVDSTNACYGGTAALF 125 (465)
Q Consensus 52 d~~~la~~Aa~~aL----~~agi~~~~Id~li~~T~s~~~~~ps~a~--~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~ 125 (465)
+-.+.+..++..++ +.. .-+.|+.|.++...+.-..|.+.. .+...|.- + +.. +-.....||+
T Consensus 24 nRL~aak~~i~~~~~~f~~~n--p~~~vGlv~fag~~a~v~~plT~D~~~~~~~L~~-----i---~~~-g~~~l~~AL~ 92 (187)
T cd01452 24 TRFQAQADAVNLICQAKTRSN--PENNVGLMTMAGNSPEVLVTLTNDQGKILSKLHD-----V---QPK-GKANFITGIQ 92 (187)
T ss_pred CHHHHHHHHHHHHHHHHHhcC--CCccEEEEEecCCceEEEECCCCCHHHHHHHHHh-----C---CCC-CcchHHHHHH
Confidence 34566666666664 432 335899999988554444443322 23334421 1 112 3345678999
Q ss_pred HHHHHHHcCCC--CCCE-EEEEEecc
Q 012353 126 NCVNWVESSSW--DGRY-GLVVCTDS 148 (465)
Q Consensus 126 ~A~~~l~sg~~--~~~~-aLVVasD~ 148 (465)
+|...++.... ..++ +++++++.
T Consensus 93 ~A~~~L~~~~~~~~~~rivi~v~S~~ 118 (187)
T cd01452 93 IAQLALKHRQNKNQKQRIVAFVGSPI 118 (187)
T ss_pred HHHHHHhcCCCcCCcceEEEEEecCC
Confidence 99998865422 1124 66666664
No 270
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=22.06 E-value=1.2e+02 Score=28.16 Aligned_cols=33 Identities=15% Similarity=0.298 Sum_probs=27.1
Q ss_pred CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEee
Q 012353 51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSE 83 (465)
Q Consensus 51 Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~ 83 (465)
..-.+......+++|++++++++|||.|.++.-
T Consensus 31 ~~h~~~l~~~i~~~l~~~~~~~~~i~~iav~~G 63 (202)
T TIGR03725 31 RNHSEILLPMIEELLAEAGLSLQDLDAIAVGVG 63 (202)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC
Confidence 345666777899999999999999999998643
No 271
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=21.48 E-value=86 Score=30.62 Aligned_cols=29 Identities=17% Similarity=0.155 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEEEEe
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li~~T 82 (465)
.+......+++|++++++++|||.|.++.
T Consensus 30 ~~~L~~~i~~~l~~~~~~~~did~iavt~ 58 (268)
T PF00814_consen 30 SENLPPLIEELLKEAGISLSDIDAIAVTR 58 (268)
T ss_dssp HHHHHHHHHHHHHHHTS-GGGESEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 35556788999999999999999998754
No 272
>cd01461 vWA_interalpha_trypsin_inhibitor vWA_interalpha trypsin inhibitor (ITI): ITI is a glycoprotein composed of three polypeptides- two heavy chains and one light chain (bikunin). Bikunin confers the protease-inhibitor function while the heavy chains are involved in rendering stability to the extracellular matrix by binding to hyaluronic acid. The heavy chains carry the VWA domain with a conserved MIDAS motif. Although the exact role of the VWA domains remains unknown, it has been speculated to be involved in mediating protein-protein interactions with the components of the extracellular matrix.
Probab=20.61 E-value=3.9e+02 Score=23.12 Aligned_cols=87 Identities=13% Similarity=0.100 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHCCCCc-CCccEEEEEeecCCCC---cccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHH
Q 012353 54 ISMSLTAVTNLLEKYKIDP-KQIGRLEVGSETVIDK---SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~-~~Id~li~~T~s~~~~---~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~ 129 (465)
.+.+.+++..++.. +.+ +.|..+.+++...... .+.....+.+.+... .. +.. .++.....||..|..
T Consensus 20 ~~~~~~al~~~l~~--l~~~~~~~l~~Fs~~~~~~~~~~~~~~~~~~~~~~~~l--~~---~~~-~g~T~l~~al~~a~~ 91 (171)
T cd01461 20 IEQTKEALLTALKD--LPPGDYFNIIGFSDTVEEFSPSSVSATAENVAAAIEYV--NR---LQA-LGGTNMNDALEAALE 91 (171)
T ss_pred HHHHHHHHHHHHHh--CCCCCEEEEEEeCCCceeecCcceeCCHHHHHHHHHHH--Hh---cCC-CCCcCHHHHHHHHHH
Confidence 56777777777776 433 3587777766532211 111122333333210 11 111 566778889999998
Q ss_pred HHHcCCCCCCEEEEEEeccc
Q 012353 130 WVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVasD~~ 149 (465)
.+.... ...+.+|+-+|-.
T Consensus 92 ~l~~~~-~~~~~iillTDG~ 110 (171)
T cd01461 92 LLNSSP-GSVPQIILLTDGE 110 (171)
T ss_pred hhccCC-CCccEEEEEeCCC
Confidence 887632 2367777777754
No 273
>cd01453 vWA_transcription_factor_IIH_type Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins contain a VWA domain. The p44 subunit of TFIIH functions as a DNA helicase in RNA polymerase II transcription initiation and DNA repair, and its transcriptional activity is dependent on its C-terminal Zn-binding domains. The function of the vWA domain is unclear, but may be involved in complex assembly. The MIDAS motif is not conserved in this sub-group.
Probab=20.34 E-value=4.7e+02 Score=23.68 Aligned_cols=89 Identities=10% Similarity=0.094 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHHHHHC--CCCcCCccEEEEEeecCCCCccc--HHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHH
Q 012353 52 DVISMSLTAVTNLLEKY--KIDPKQIGRLEVGSETVIDKSKS--IKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (465)
Q Consensus 52 d~~~la~~Aa~~aL~~a--gi~~~~Id~li~~T~s~~~~~ps--~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A 127 (465)
+-.+-+..++++.+++. .-.-+.|++|.+...++.-.+|- ....+...|. + . +. ..|-.....||..|
T Consensus 24 tRl~~ak~~~~~fi~~~~~~~~~~~vglv~f~~~~a~~~~PlT~D~~~~~~~L~----~-~--~~-~~G~t~l~~aL~~A 95 (183)
T cd01453 24 SRLAVVLKLLELFIEEFFDQNPISQLGIISIKNGRAEKLTDLTGNPRKHIQALK----T-A--RE-CSGEPSLQNGLEMA 95 (183)
T ss_pred hHHHHHHHHHHHHHHHHhhcCccccEEEEEEcCCccEEEECCCCCHHHHHHHhh----c-c--cC-CCCchhHHHHHHHH
Confidence 45666777777776642 12235699999843332222332 1223445553 1 1 11 13335777899999
Q ss_pred HHHHHcCC-CCCCEEEEEEecc
Q 012353 128 VNWVESSS-WDGRYGLVVCTDS 148 (465)
Q Consensus 128 ~~~l~sg~-~~~~~aLVVasD~ 148 (465)
...+.... ...+++||+.+|.
T Consensus 96 ~~~l~~~~~~~~~~iiil~sd~ 117 (183)
T cd01453 96 LESLKHMPSHGSREVLIIFSSL 117 (183)
T ss_pred HHHHhcCCccCceEEEEEEcCC
Confidence 99997521 1236788887774
No 274
>PF02887 PK_C: Pyruvate kinase, alpha/beta domain; InterPro: IPR015795 Pyruvate kinase (2.7.1.40 from EC) (PK) catalyses the final step in glycolysis [], the conversion of phosphoenolpyruvate to pyruvate with concomitant phosphorylation of ADP to ATP: ADP + phosphoenolpyruvate = ATP + pyruvate The enzyme, which is found in all living organisms, requires both magnesium and potassium ions for its activity. In vertebrates, there are four tissue-specific isozymes: L (liver), R (red cells), M1 (muscle, heart and brain), and M2 (early foetal tissue). In plants, PK exists as cytoplasmic and plastid isozymes, while most bacteria and lower eukaryotes have one form, except in certain bacteria, such as Escherichia coli, that have two isozymes. All isozymes appear to be tetramers of identical subunits of ~500 residues. PK helps control the rate of glycolysis, along with phosphofructokinase (IPR000023 from INTERPRO) and hexokinase (IPR001312 from INTERPRO). PK possesses allosteric sites for numerous effectors, yet the isozymes respond differently, in keeping with their different tissue distributions []. The activity of L-type (liver) PK is increased by fructose-1,6-bisphosphate (F1,6BP) and lowered by ATP and alanine (gluconeogenic precursor), therefore when glucose levels are high, glycolysis is promoted, and when levels are low, gluconeogenesis is promoted. L-type PK is also hormonally regulated, being activated by insulin and inhibited by glucagon, which covalently modifies the PK enzyme. M1-type (muscle, brain) PK is inhibited by ATP, but F1,6BP and alanine have no effect, which correlates with the function of muscle and brain, as opposed to the liver. The structure of several pyruvate kinases from various organisms have been determined [, ]. The protein comprises three-four domains: a small N-terminal helical domain (absent in bacterial PK), a beta/alpha-barrel domain, a beta-barrel domain (inserted within the beta/alpha-barrel domain), and a 3-layer alpha/beta/alpha sandwich domain. This entry represents the 3-layer alpha/beta/alpha sandwich domain. This domain has a similar topology to the archaeal hypothetical protein, MTH1675 from Methanobacterium thermoautotrophicum.; PDB: 3QTG_B 1VP8_A 1T57_C 3N25_A 1AQF_C 2G50_B 1F3X_G 1A5U_F 1A49_E 1F3W_C ....
Probab=20.16 E-value=5e+02 Score=21.43 Aligned_cols=73 Identities=8% Similarity=-0.036 Sum_probs=47.4
Q ss_pred CccEEEEEeecCCCC---------cc----cHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCC--CC
Q 012353 74 QIGRLEVGSETVIDK---------SK----SIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSW--DG 138 (465)
Q Consensus 74 ~Id~li~~T~s~~~~---------~p----s~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~--~~ 138 (465)
++..|++.|.|+.-. .| +....+.+.|.+ ...+..+-+...-...-..+..+..++....+ +|
T Consensus 16 ~ak~Ivv~T~sG~ta~~isk~RP~~pIiavt~~~~~~r~l~l--~~GV~p~~~~~~~~~~~~~~~~a~~~~~~~g~~~~g 93 (117)
T PF02887_consen 16 NAKAIVVFTESGRTARLISKYRPKVPIIAVTPNESVARQLSL--YWGVYPVLIEEFDKDTEELIAEALEYAKERGLLKPG 93 (117)
T ss_dssp TESEEEEE-SSSHHHHHHHHT-TSSEEEEEESSHHHHHHGGG--STTEEEEECSSHSHSHHHHHHHHHHHHHHTTSS-TT
T ss_pred CCCEEEEECCCchHHHHHHhhCCCCeEEEEcCcHHHHhhhhc--ccceEEEEeccccccHHHHHHHHHHHHHHcCCCCCC
Confidence 477899999887321 11 233458888888 56777766665554466677777776654322 77
Q ss_pred CEEEEEEecc
Q 012353 139 RYGLVVCTDS 148 (465)
Q Consensus 139 ~~aLVVasD~ 148 (465)
+.++|+++..
T Consensus 94 d~vVv~~g~~ 103 (117)
T PF02887_consen 94 DKVVVVAGMP 103 (117)
T ss_dssp SEEEEEEESS
T ss_pred CEEEEEeCCC
Confidence 8999998854
Done!