Query 012353
Match_columns 465
No_of_seqs 305 out of 2120
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 07:47:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012353.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012353hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2v4w_A Hydroxymethylglutaryl-C 100.0 4.8E-93 1.6E-97 736.8 39.8 449 1-450 2-459 (460)
2 2wya_A Hydroxymethylglutaryl-C 100.0 1.6E-87 5.4E-92 704.1 38.6 450 1-450 2-459 (460)
3 2p8u_A Hydroxymethylglutaryl-C 100.0 1.4E-84 4.8E-89 682.6 40.9 448 2-450 22-478 (478)
4 2f82_A HMG-COA synthase; HMGS1 100.0 7.2E-83 2.5E-87 666.7 41.3 447 2-449 1-450 (450)
5 3v4n_A HMG-COA synthase; hydro 100.0 1.3E-71 4.3E-76 570.6 31.1 382 1-447 4-387 (388)
6 3sqz_A Putative hydroxymethylg 100.0 9.1E-70 3.1E-74 561.2 29.3 385 2-449 34-422 (425)
7 1xpm_A 3-hydroxy-3-methylgluta 100.0 1.2E-68 3.9E-73 551.3 32.2 387 3-450 1-389 (396)
8 4ewp_A 3-oxoacyl-[acyl-carrier 100.0 4.8E-52 1.6E-56 420.9 29.1 307 2-370 11-349 (350)
9 3il3_A 3-oxoacyl-[acyl-carrier 100.0 1.1E-49 3.9E-54 399.1 31.1 305 3-370 8-323 (323)
10 3gwa_A 3-oxoacyl-(acyl-carrier 100.0 1.1E-47 3.8E-52 391.0 32.6 306 3-370 29-365 (365)
11 4efi_A 3-oxoacyl-(acyl-carrier 100.0 2.2E-48 7.4E-53 394.7 27.2 307 4-372 16-345 (354)
12 4dfe_A 3-oxoacyl-[acyl-carrier 100.0 1.5E-47 5E-52 385.5 31.1 305 3-370 10-333 (333)
13 3il6_A 3-oxoacyl-[acyl-carrier 100.0 2.5E-47 8.5E-52 382.0 31.0 301 1-370 1-321 (321)
14 3h78_A PQS biosynthetic enzyme 100.0 5.2E-47 1.8E-51 385.0 31.8 303 2-372 23-353 (359)
15 3s21_A 3-oxoacyl-[ACP] synthas 100.0 1.4E-46 4.9E-51 380.1 30.3 304 3-370 11-345 (345)
16 3led_A 3-oxoacyl-acyl carrier 100.0 1.1E-43 3.7E-48 364.2 28.8 308 3-371 23-392 (392)
17 3s3l_A CERJ; acyltransferase, 100.0 9.8E-44 3.4E-48 360.7 27.2 304 3-372 4-340 (357)
18 2x3e_A 3-oxoacyl-[acyl-carrier 100.0 5E-43 1.7E-47 352.1 26.0 306 1-372 2-325 (331)
19 1hnj_A Beta-ketoacyl-acyl carr 100.0 3.4E-42 1.2E-46 343.7 29.5 305 3-370 1-317 (317)
20 1mzj_A Beta-ketoacylsynthase I 100.0 1.2E-41 4.2E-46 343.1 31.3 306 3-372 10-333 (339)
21 3euo_A Type III pentaketide sy 100.0 8.1E-42 2.8E-46 349.2 26.6 315 3-371 1-379 (379)
22 3ov2_A Curcumin synthase; type 100.0 2.1E-41 7E-46 347.7 29.1 307 3-372 15-388 (393)
23 2ebd_A 3-oxoacyl-[acyl-carrier 100.0 1.1E-40 3.7E-45 331.4 31.4 302 3-370 1-309 (309)
24 1zow_A 3-oxoacyl-[acyl-carrier 100.0 1.2E-40 4E-45 331.9 30.2 305 3-371 1-312 (313)
25 1ted_A PKS18; thiolase fold, s 100.0 2.4E-41 8.2E-46 347.7 25.2 310 3-372 31-392 (393)
26 3e1h_A PKSIIINC, putative unch 100.0 5.5E-41 1.9E-45 349.8 27.0 316 3-372 30-409 (465)
27 1u6e_A 3-oxoacyl-[acyl-carrier 100.0 3.1E-40 1.1E-44 331.9 31.6 306 4-372 12-334 (335)
28 2d3m_A Pentaketide chromone sy 100.0 1.7E-40 6E-45 342.6 26.6 306 2-372 27-404 (406)
29 1u0m_A Putative polyketide syn 100.0 5.8E-41 2E-45 343.6 22.2 306 3-372 8-356 (382)
30 1ee0_A 2-pyrone synthase; poly 100.0 1.3E-40 4.3E-45 343.2 24.4 302 3-372 20-393 (402)
31 1ub7_A 3-oxoacyl-[acyl-carrier 100.0 1.6E-39 5.4E-44 325.1 31.5 303 5-371 2-320 (322)
32 2p0u_A Stilbenecarboxylate syn 100.0 3.9E-40 1.3E-44 340.5 27.3 305 3-372 33-406 (413)
33 3oit_A OS07G0271500 protein; t 100.0 4.8E-40 1.6E-44 336.9 27.6 309 3-372 9-383 (387)
34 3a5r_A Benzalacetone synthase; 100.0 2.4E-40 8.2E-45 339.6 25.0 304 1-372 9-384 (387)
35 1i88_A CHS2, chalcone synthase 100.0 3.7E-40 1.3E-44 338.4 26.1 306 2-372 14-388 (389)
36 3awk_A Chalcone synthase-like 100.0 1.1E-39 3.9E-44 336.0 25.1 302 3-372 28-401 (402)
37 2h84_A Steely1; thiolase-fold, 100.0 2.2E-39 7.6E-44 330.8 26.6 305 3-371 12-373 (374)
38 3v7i_A Putative polyketide syn 100.0 2.7E-39 9.3E-44 332.8 26.8 308 2-370 24-412 (413)
39 1xes_A Dihydropinosylvin synth 100.0 5.1E-39 1.7E-43 332.2 26.5 305 2-372 36-411 (413)
40 3tsy_A Fusion protein 4-coumar 100.0 4.1E-38 1.4E-42 358.2 27.4 310 2-372 601-975 (979)
41 3lma_A Stage V sporulation pro 99.9 7.1E-23 2.4E-27 202.8 20.0 283 4-364 14-314 (347)
42 4dd5_A Acetyl-COA acetyltransf 99.7 1.1E-16 3.9E-21 164.1 20.3 98 48-149 26-123 (396)
43 3ss6_A Acetyl-COA acetyltransf 99.7 6.3E-17 2.2E-21 165.9 18.4 98 48-149 24-121 (394)
44 4e1l_A Acetoacetyl-COA thiolas 99.7 1.3E-16 4.3E-21 163.7 20.6 97 49-149 25-121 (395)
45 1tqy_A Beta-ketoacyl synthase/ 99.7 5.8E-16 2E-20 160.2 23.5 298 1-370 1-416 (424)
46 3o04_A LMO2201 protein, beta-k 99.7 4.6E-15 1.6E-19 152.9 27.8 230 1-258 1-314 (413)
47 2iik_A 3-ketoacyl-COA thiolase 99.7 5.8E-16 2E-20 159.8 18.4 131 14-149 10-147 (418)
48 1j3n_A 3-oxoacyl-(acyl-carrier 99.7 1.1E-14 3.6E-19 149.9 24.4 226 3-256 2-310 (408)
49 2gqd_A 3-oxoacyl-[acyl-carrier 99.7 2.1E-14 7.3E-19 149.0 26.8 227 3-257 28-337 (437)
50 1ox0_A Beta ketoacyl-acyl carr 99.7 2.5E-14 8.4E-19 148.2 26.3 226 4-257 24-332 (430)
51 1e5m_A KAS II, beta ketoacyl a 99.6 3.8E-14 1.3E-18 146.2 26.8 226 4-257 8-317 (416)
52 3svk_A Acetyl-COA acetyltransf 99.6 9.8E-15 3.3E-19 150.1 19.1 97 49-149 28-126 (407)
53 3ho9_A 3-oxoacyl-[acyl-carrier 99.6 2.7E-14 9.1E-19 147.8 22.4 227 3-257 18-328 (427)
54 3goa_A 3-ketoacyl-COA thiolase 99.6 1.2E-14 4E-19 148.6 19.4 97 49-149 23-121 (387)
55 4ddo_A 3-oxoacyl-[acyl-carrier 99.6 1.5E-13 5.1E-18 143.2 26.0 229 2-258 23-345 (451)
56 1wl4_A Acetyl-coenzyme A acety 99.6 4.7E-14 1.6E-18 144.6 21.0 96 50-149 27-122 (397)
57 1ulq_A Putative acetyl-COA ace 99.6 5.2E-14 1.8E-18 144.5 21.4 97 49-149 22-119 (401)
58 2iwz_A 3-oxoacyl-[acyl-carrier 99.6 3.3E-13 1.1E-17 140.1 27.3 227 3-257 21-337 (438)
59 2vu1_A Acetyl-COA acetyltransf 99.6 4E-14 1.4E-18 144.9 20.2 96 50-149 24-119 (392)
60 4ewg_A Beta-ketoacyl synthase; 99.6 5.1E-13 1.7E-17 137.5 28.5 225 3-257 6-315 (412)
61 3kzu_A 3-oxoacyl-(acyl-carrier 99.6 1.1E-13 3.7E-18 143.3 21.9 172 53-251 87-323 (428)
62 2ib8_A Acetyl-COA acetyltransf 99.6 3.7E-13 1.3E-17 137.8 22.9 97 49-149 28-124 (395)
63 2gp6_A 3-oxoacyl-[acyl-carrier 99.6 3.1E-12 1.1E-16 132.5 29.9 226 3-257 28-338 (434)
64 2ix4_A 3-oxoacyl-[acyl-carrier 99.5 3.8E-13 1.3E-17 139.3 22.6 178 53-257 88-330 (431)
65 1afw_A 3-ketoacetyl-COA thiola 99.5 2.6E-13 9E-18 138.8 19.9 97 49-149 31-131 (393)
66 1tqy_B Actinorhodin polyketide 99.5 6E-13 2.1E-17 137.1 22.7 223 3-257 9-315 (415)
67 2wu9_A 3-ketoacyl-COA thiolase 99.5 2.9E-13 9.9E-18 140.4 19.7 97 49-149 51-148 (442)
68 1wdk_C 3-ketoacyl-COA thiolase 99.5 2.9E-13 1E-17 138.4 19.5 96 50-149 27-124 (390)
69 3mqd_A Beta-ketoacyl synthase; 99.5 3.5E-12 1.2E-16 131.9 26.9 224 3-259 23-329 (428)
70 2wge_A 3-oxoacyl-[acyl-carrier 99.5 5.6E-12 1.9E-16 129.9 27.1 226 3-258 12-322 (416)
71 2vba_A 3-oxoacyl-[acyl-carrier 99.5 3.5E-12 1.2E-16 131.0 23.8 222 3-257 2-308 (406)
72 2hg4_A DEBS, 6-deoxyerythronol 99.4 4.6E-11 1.6E-15 134.2 28.3 230 3-258 39-345 (917)
73 2qo3_A Eryaii erythromycin pol 99.4 1.3E-11 4.6E-16 138.5 22.5 180 53-258 95-323 (915)
74 3hhd_A Fatty acid synthase; tr 99.4 4E-11 1.4E-15 135.2 22.8 229 3-257 4-305 (965)
75 4egv_A Acetyl-COA acetyltransf 99.0 1.6E-08 5.6E-13 106.7 18.7 108 37-149 23-145 (520)
76 3zen_D Fatty acid synthase; tr 98.9 1.4E-08 4.7E-13 124.7 18.5 186 53-260 2647-2905(3089)
77 2pff_A Fatty acid synthase sub 98.4 7.9E-07 2.7E-11 101.8 12.2 90 54-149 1013-1136(1688)
78 2vz8_A Fatty acid synthase; tr 98.4 5.8E-06 2E-10 101.6 18.1 230 3-259 2-305 (2512)
79 2uv9_A Fatty acid synthase alp 98.1 7.3E-05 2.5E-09 88.1 20.2 91 53-149 1186-1310(1878)
80 2uv8_A Fatty acid synthase sub 97.9 7.2E-05 2.5E-09 88.3 14.6 91 53-149 1211-1335(1887)
81 3s3l_A CERJ; acyltransferase, 90.8 0.54 1.8E-05 46.6 7.9 96 53-172 236-339 (357)
82 3lma_A Stage V sporulation pro 90.4 0.62 2.1E-05 45.9 7.8 87 53-149 202-310 (347)
83 4e1l_A Acetoacetyl-COA thiolas 90.3 1.2 4E-05 44.7 10.0 93 57-170 296-394 (395)
84 4dd5_A Acetyl-COA acetyltransf 89.0 0.74 2.5E-05 46.3 7.3 95 57-171 297-396 (396)
85 2vu1_A Acetyl-COA acetyltransf 88.0 1.1 3.7E-05 44.9 7.8 94 57-171 292-391 (392)
86 3svk_A Acetyl-COA acetyltransf 87.5 1.3 4.3E-05 44.8 8.0 92 58-171 308-406 (407)
87 2x3e_A 3-oxoacyl-[acyl-carrier 86.5 2.1 7.3E-05 41.5 8.8 81 55-145 224-309 (331)
88 3il3_A 3-oxoacyl-[acyl-carrier 86.2 2.7 9.2E-05 40.8 9.3 84 54-145 223-309 (323)
89 4ewp_A 3-oxoacyl-[acyl-carrier 86.2 2.1 7.1E-05 41.9 8.6 81 55-145 249-335 (350)
90 2ebd_A 3-oxoacyl-[acyl-carrier 86.1 2.2 7.7E-05 40.7 8.6 83 56-145 211-295 (309)
91 1zow_A 3-oxoacyl-[acyl-carrier 86.0 2.8 9.6E-05 40.1 9.2 82 55-145 212-297 (313)
92 3ss6_A Acetyl-COA acetyltransf 85.9 1.6 5.3E-05 43.8 7.6 41 57-102 294-334 (394)
93 3gwa_A 3-oxoacyl-(acyl-carrier 85.8 2.8 9.7E-05 41.4 9.4 84 54-145 265-351 (365)
94 3s21_A 3-oxoacyl-[ACP] synthas 85.8 2.7 9.2E-05 41.1 9.1 83 55-145 246-331 (345)
95 1hnj_A Beta-ketoacyl-acyl carr 85.5 2.4 8.1E-05 40.7 8.5 79 56-145 219-303 (317)
96 4dfe_A 3-oxoacyl-[acyl-carrier 85.5 2.8 9.4E-05 40.8 9.0 83 55-145 234-319 (333)
97 1ulq_A Putative acetyl-COA ace 85.5 2.5 8.4E-05 42.4 8.9 93 57-171 298-399 (401)
98 1mzj_A Beta-ketoacylsynthase I 85.2 3.5 0.00012 40.0 9.6 81 55-145 231-317 (339)
99 1wl4_A Acetyl-coenzyme A acety 84.5 1.6 5.6E-05 43.7 7.0 41 57-102 297-337 (397)
100 3goa_A 3-ketoacyl-COA thiolase 83.5 2.3 8E-05 42.4 7.6 41 57-102 284-324 (387)
101 1ub7_A 3-oxoacyl-[acyl-carrier 83.4 3.2 0.00011 39.9 8.3 83 55-145 220-305 (322)
102 1u6e_A 3-oxoacyl-[acyl-carrier 83.2 4.3 0.00015 39.2 9.2 81 55-145 232-318 (335)
103 3h78_A PQS biosynthetic enzyme 82.9 3.3 0.00011 40.9 8.4 81 54-145 253-337 (359)
104 4egv_A Acetyl-COA acetyltransf 82.7 5.4 0.00018 41.5 10.2 84 55-145 317-407 (520)
105 1wdk_C 3-ketoacyl-COA thiolase 81.6 3 0.0001 41.6 7.5 41 57-102 287-327 (390)
106 1ted_A PKS18; thiolase fold, s 79.1 3.3 0.00011 41.3 6.9 81 56-145 288-376 (393)
107 2ib8_A Acetyl-COA acetyltransf 77.9 5.4 0.00018 39.7 8.1 41 57-102 297-337 (395)
108 3v4n_A HMG-COA synthase; hydro 76.9 1.5 5.2E-05 43.9 3.6 100 53-169 210-320 (388)
109 4efi_A 3-oxoacyl-(acyl-carrier 76.5 2.8 9.5E-05 41.2 5.4 81 54-145 243-329 (354)
110 3sqz_A Putative hydroxymethylg 74.1 1.7 5.9E-05 44.1 3.2 101 53-170 239-351 (425)
111 2iik_A 3-ketoacyl-COA thiolase 71.7 6.7 0.00023 39.5 6.9 41 57-102 315-355 (418)
112 1xpm_A 3-hydroxy-3-methylgluta 70.7 5.8 0.0002 39.6 6.1 27 56-82 208-234 (396)
113 1u0m_A Putative polyketide syn 70.3 5.9 0.0002 39.2 6.1 76 60-145 257-340 (382)
114 2wu9_A 3-ketoacyl-COA thiolase 67.5 9 0.00031 38.9 6.8 25 57-81 317-341 (442)
115 2h84_A Steely1; thiolase-fold, 67.1 8.5 0.00029 37.8 6.4 80 56-145 268-358 (374)
116 1afw_A 3-ketoacetyl-COA thiola 65.4 9.2 0.00031 38.1 6.3 26 56-81 294-319 (393)
117 3ho9_A 3-oxoacyl-[acyl-carrier 59.9 7.3 0.00025 39.2 4.4 78 55-134 292-375 (427)
118 4ddo_A 3-oxoacyl-[acyl-carrier 57.6 6.8 0.00023 39.8 3.8 46 56-102 309-355 (451)
119 3led_A 3-oxoacyl-acyl carrier 57.0 17 0.00059 36.1 6.6 84 53-145 289-377 (392)
120 3kzu_A 3-oxoacyl-(acyl-carrier 56.4 15 0.00053 36.9 6.2 45 56-102 294-339 (428)
121 1j3n_A 3-oxoacyl-(acyl-carrier 54.6 7.2 0.00025 38.9 3.3 78 55-134 275-358 (408)
122 1tqy_B Actinorhodin polyketide 53.1 13 0.00044 37.2 4.9 46 56-102 280-326 (415)
123 4ewg_A Beta-ketoacyl synthase; 51.9 12 0.00042 37.4 4.5 47 54-101 278-325 (412)
124 3hhd_A Fatty acid synthase; tr 51.1 14 0.00048 41.4 5.3 80 54-134 268-353 (965)
125 1e5m_A KAS II, beta ketoacyl a 49.5 14 0.00048 36.9 4.5 78 55-134 281-364 (416)
126 3tsy_A Fusion protein 4-coumar 49.4 21 0.00071 39.8 6.4 75 54-134 863-943 (979)
127 3o04_A LMO2201 protein, beta-k 49.2 15 0.00051 36.6 4.7 47 55-102 277-324 (413)
128 2gqd_A 3-oxoacyl-[acyl-carrier 48.3 15 0.00053 37.0 4.6 47 55-102 301-348 (437)
129 1tqy_A Beta-ketoacyl synthase/ 47.8 14 0.00049 37.0 4.2 78 55-134 283-366 (424)
130 2d3m_A Pentaketide chromone sy 45.0 49 0.0017 32.8 7.7 80 56-145 291-388 (406)
131 1xho_A Chorismate mutase; sout 44.5 36 0.0012 28.8 5.4 60 50-116 42-107 (148)
132 2iwz_A 3-oxoacyl-[acyl-carrier 43.3 16 0.00055 36.9 3.8 47 55-102 301-348 (438)
133 3a5r_A Benzalacetone synthase; 39.7 64 0.0022 31.7 7.6 80 58-145 276-368 (387)
134 2gel_A Putative GRAM negative 39.4 30 0.001 31.6 4.8 59 54-114 35-93 (231)
135 2gp6_A 3-oxoacyl-[acyl-carrier 37.5 39 0.0013 33.9 5.7 77 55-135 302-384 (434)
136 2wge_A 3-oxoacyl-[acyl-carrier 36.8 13 0.00044 37.3 1.8 31 55-85 285-316 (416)
137 2v4w_A Hydroxymethylglutaryl-C 36.5 81 0.0028 32.0 7.8 22 61-82 229-254 (460)
138 1ox0_A Beta ketoacyl-acyl carr 35.5 27 0.00092 35.0 4.0 75 55-134 296-376 (430)
139 2ix4_A 3-oxoacyl-[acyl-carrier 33.8 15 0.0005 37.0 1.7 46 55-101 294-340 (431)
140 1ufy_A Chorismate mutase; shik 32.4 59 0.002 26.7 4.7 48 61-115 27-77 (122)
141 2qo3_A Eryaii erythromycin pol 31.8 66 0.0023 35.7 6.7 80 54-134 285-372 (915)
142 3eno_A Putative O-sialoglycopr 31.5 65 0.0022 31.1 5.9 27 55-81 54-80 (334)
143 1dbf_A Protein (chorismate mut 30.6 50 0.0017 27.3 4.1 49 61-116 28-79 (127)
144 3r6m_A YEAZ, resuscitation pro 30.3 47 0.0016 30.0 4.4 30 55-84 37-66 (213)
145 2f82_A HMG-COA synthase; HMGS1 28.9 1.4E+02 0.0047 30.0 8.0 26 58-83 217-248 (450)
146 1i88_A CHS2, chalcone synthase 24.7 1.7E+02 0.0059 28.5 7.8 83 52-145 270-372 (389)
147 2a6a_A Hypothetical protein TM 24.5 54 0.0018 29.7 3.6 59 54-114 46-104 (218)
148 2ivn_A O-sialoglycoprotein end 24.5 61 0.0021 31.1 4.3 28 55-82 49-76 (330)
149 3v7i_A Putative polyketide syn 23.8 2.3E+02 0.0077 28.1 8.4 81 54-145 306-398 (413)
150 1ee0_A 2-pyrone synthase; poly 22.5 1.5E+02 0.0051 29.1 6.8 87 52-145 275-377 (402)
151 2p8u_A Hydroxymethylglutaryl-C 22.3 1.6E+02 0.0054 29.9 7.1 42 55-101 238-287 (478)
152 2p0u_A Stilbenecarboxylate syn 21.9 2E+02 0.0069 28.3 7.7 79 56-145 296-390 (413)
153 3ibs_A Conserved hypothetical 21.4 95 0.0032 27.0 4.7 91 51-149 31-122 (218)
154 3ven_A O-carbamoyltransferase 20.9 46 0.0016 34.9 2.7 27 56-82 51-77 (576)
155 2vz8_A Fatty acid synthase; tr 20.7 65 0.0022 40.1 4.3 81 54-135 266-352 (2512)
156 3euo_A Type III pentaketide sy 20.4 2.8E+02 0.0097 26.9 8.3 28 234-261 96-127 (379)
No 1
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=100.00 E-value=4.8e-93 Score=736.83 Aligned_cols=449 Identities=50% Similarity=0.887 Sum_probs=414.0
Q ss_pred CCceeEEeEEEEecCCceechHHHHHhcCCChhhhhhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 012353 1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV 80 (465)
Q Consensus 1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 80 (465)
+|++|||.++++|+|+++|+++||++..|.++.++++|+|++++++++++|++++||++|+++||+++|++|++||+||+
T Consensus 2 ~~~~vgI~gig~ylP~~~v~n~el~~~~g~~~~~~~~Gig~r~~~va~~~E~~~~La~~Aa~~AL~~agi~~~dId~Iiv 81 (460)
T 2v4w_A 2 MPKDVGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEV 81 (460)
T ss_dssp CCSSCEEEEEEEECCSEEEEHHHHHHHTTCCTTCCCCCCCCCEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred CCCceEEEEEEEECCCcEecHHHHHHHhCCCHHHeeeeeeeEEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccccCCCCCccc
Q 012353 81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTG 160 (465)
Q Consensus 81 ~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~ 160 (465)
+|+|+++..|+++++|+++||+.|++++.+||+++||+||++||.+|..||++|.+|+++||||++|+++|.++++++|+
T Consensus 82 aT~t~~~~~ps~A~~v~~~LGl~g~~~~~a~Dv~~ACsGg~~AL~~A~~~I~sg~~~~~~aLVVgaE~~s~~~~~~r~t~ 161 (460)
T 2v4w_A 82 GTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIAVYPSGNARPTG 161 (460)
T ss_dssp ECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEECCCSSTTGGGC
T ss_pred EecCCCCCCCcHHHHHHHHhCCCCCCCcEEEEecchhHHHHHHHHHHHHHHHhCCccCCEEEEEecccccccCCCCCccc
Confidence 99999999999999999999985557789999999999999999999999999976679999999999999888889999
Q ss_pred ccceeeeeecCCCCcccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhh-hc----CC
Q 012353 161 GAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL-EG----KQ 235 (465)
Q Consensus 161 GdGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~-~~----~~ 235 (465)
||||+||||++++++.++.+..|+++.+.+|||+|...++||.|||++++++|++.++++|+.|+++..++ +. +|
T Consensus 162 GDGA~A~ll~~~~~l~~~~~~~Gs~~~~l~d~~~p~~~~~~~~mdG~~v~~~av~~l~~~~~~y~~~~~~~l~~~~~~~g 241 (460)
T 2v4w_A 162 GAGAVAMLIGPKAPLALERGLRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSDRP 241 (460)
T ss_dssp EEEEEEEEEESSCSEEECTTCCEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred ccceeEEEeecCCCceEEEcceecceeeeeccCCCCCCCCCeEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccC
Confidence 99999999999887766667889999999999999877789999999999999999999999999886542 34 68
Q ss_pred CCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccC
Q 012353 236 FSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQ 315 (465)
Q Consensus 236 ~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~ 315 (465)
++++|||+|||||||.||+++++++|.+++|...+..+.+..|+.++++.+++.+++|+||++||++.+.+++.|.+||.
T Consensus 242 l~~~did~~v~Hqan~rii~~~~~rL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ekv~ 321 (460)
T 2v4w_A 242 FTLDDLQYMIFHTPFCKMVQKSLARLMFNDFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTK 321 (460)
T ss_dssp CCGGGCSEEEECCSSHHHHHHHHHHHHHHHHHHSCHHHHHHHCGGGGGGTTCCGGGGTTCHHHHHHHHHHHHHHHHHHTG
T ss_pred CCHHHhceEeecCCchHHHHHHHHHcCCCcccccccccccccccchhhhccccccccccchhHHHHHHhhhhhhhHhhcc
Confidence 99999999999999999999999999999888766554455677777788999999999999999999999999999999
Q ss_pred CCcccccccCccchhhHHHHHHHHHHhcCC--CCCCCEEEEEEeccchheeeeEEEEeCCCC-CCchhhHHhhc-cHHHH
Q 012353 316 PSTLIPKQVGNMYTASLYAALASLIHNKHS--ELDGKRVVLFSYGSGLTATMFSLKLSEGHH-PFSLSNILSVM-NVAGK 391 (465)
Q Consensus 316 ~s~~~~~~~GN~~taS~~l~L~~ll~~~~~--~~~G~rill~syGsG~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~ 391 (465)
+++.+++++|||||||+|++|+++|++ ++ +++|+||+|+|||||+++++|+++++++.. .+.++++++.. ++.++
T Consensus 322 ~~l~~~~~~GNt~aASiplaL~s~l~~-~~~~~~~G~rill~syGsG~~s~~fs~~v~~~~~~~~~~~~~~~~~~~~~~~ 400 (460)
T 2v4w_A 322 ASLYLSTHNGNMYTSSLYGCLASLLSH-HSAQELAGSRIGAFSYGSGLAASFFSFRVSQDAAPGSPLDKLVSSTSDLPKR 400 (460)
T ss_dssp GGGHHHHHHCCCGGGHHHHHHHHHHHH-SCHHHHTTCEEEEEEEETTTEEEEEEEEECSCCSTTSHHHHHHHTTTTHHHH
T ss_pred cccchhhccCccHHHHHHHHHHHHHHh-CCcccCCCCEEEEEEecCCcceeEEEEEEeCCcccchhHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 54 678999999999999999999999998321 12356776544 89999
Q ss_pred hccCCcCCHHHHHHHHHHHHHhcCCCCcccCCCCCCCCCCcEEEEeeCCCceeEeeecc
Q 012353 392 LKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 450 (465)
Q Consensus 392 L~~R~~l~~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~v~~~~~R~Y~~~~ 450 (465)
|++|+++|++||++++++||+.|++++|+|.++++.++||+|||++||++|||+|++++
T Consensus 401 L~~R~~~s~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~vd~~~~r~y~~~~ 459 (460)
T 2v4w_A 401 LASRKCVSPEEFTEIMNQREQFYHKVNFSPPGDTNSLFPGTWYLERVDEQHRRKYARRP 459 (460)
T ss_dssp HHTSEEECHHHHHHHHHHHHHHTTCCSBCCCSCGGGSCTTCEEEEEECTTSCEEEEECC
T ss_pred HhCCccCCHHHHHHHHHHHHHhccCCCCCCCCccccCCCCCEEEeEecCCceEeEeecC
Confidence 99999999999999999999999999999999999999999999999999999999987
No 2
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-87 Score=704.05 Aligned_cols=450 Identities=50% Similarity=0.883 Sum_probs=411.1
Q ss_pred CCceeEEeEEEEecCCceechHHHHHhcCCChhhhhhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 012353 1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV 80 (465)
Q Consensus 1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 80 (465)
||++|||.++++|+|+++|+++||++.+|++++||+.|+|+++++|++++||+++||++|+++||+++|++|++||+|||
T Consensus 2 m~~~VgI~~~g~y~P~~~v~~~~l~~~~~~~~~~i~~~~Gi~~r~~~~~~E~~~~ma~~Aa~~al~~a~i~~~~Id~ii~ 81 (460)
T 2wya_A 2 MPKDVGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEV 81 (460)
T ss_dssp CCSSCEEEEEEEECCSEEEEHHHHHHHTTCCTTCCCCCCCCCEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred CCCceEEEEEEEECCCeEEcHHHHHHHhCCCHHHHHHhhCcEEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 89999999999999999999999999999999999988898989999999999999999999999999999999999999
Q ss_pred EeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccccCCCCCccc
Q 012353 81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTG 160 (465)
Q Consensus 81 ~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~ 160 (465)
+|+|+++.+|+++++|+++||+.|++++.+||+++||+||++||.+|.+||++|.++++.++|+++|+..|.+++.++||
T Consensus 82 aT~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~~s~~~~~~d~~~~~~~ 161 (460)
T 2wya_A 82 GTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIAVYPSGNARPTG 161 (460)
T ss_dssp ECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEECCCSSTTGGGC
T ss_pred EeCCCCCCCCchHHHHHHHHhccCCCCeeEechhhhhhhHHHHHHHHHHHHHhccccceEEEEEeccccccccccccccC
Confidence 99999999999999999999986678999999999999999999999999999988677899999999999988899999
Q ss_pred ccceeeeeecCCCCcccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhh-----hcCC
Q 012353 161 GAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL-----EGKQ 235 (465)
Q Consensus 161 GdGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~-----~~~~ 235 (465)
||||+|||+++++++.+..+..++++.+.+|||+|..++++|.+||+++..+|+.+++++|+.+.+++... +..+
T Consensus 162 GdGA~A~l~~~~~~~~~~~~~~~~~~~~~~df~~p~~~s~~~~~dg~~s~~~~~~~g~~v~~~~~~~~~~~~~~~l~~~~ 241 (460)
T 2wya_A 162 GAGAVAMLIGPKAPLALERGLRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSDRP 241 (460)
T ss_dssp EEEEEEEEEESSCSEEECTTCCEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cchHHhhhcccCCcceeecccccccccchhhhhccCCCCCCcccCCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999998766667788889999999999988999999999999999999999999998887652 5578
Q ss_pred CCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccC
Q 012353 236 FSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQ 315 (465)
Q Consensus 236 ~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~ 315 (465)
++++|||+++|||||.+|+++++++|+++++...........++.++++.+++.++.+.+++++|......++.|..+++
T Consensus 242 ~~~~d~d~~v~Hqp~~r~~~k~~~rL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e 321 (460)
T 2wya_A 242 FTLDDLQYMIFHTPFCKMVQKSLARLMFNDFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTK 321 (460)
T ss_dssp CCGGGCSEEEECCSSHHHHHHHHHHHHHHHHHHSCHHHHHHHCGGGGGGTTCCGGGGGTCHHHHHHHHHHHHHHHHHHTG
T ss_pred CCHHHHhhhhhcccchHHHHHHHHHhcchhhhhcccchhhhhhhhhhhhcCCchhhhhhhhHHHHHHHHHHHHHhhcchh
Confidence 89999999999999999999999999988876544433333445556677899999999999999999999999999999
Q ss_pred CCcccccccCccchhhHHHHHHHHHHhc-CCCCCCCEEEEEEeccchheeeeEEEEeCCCCC-Cchhh-HHhhccHHHHh
Q 012353 316 PSTLIPKQVGNMYTASLYAALASLIHNK-HSELDGKRVVLFSYGSGLTATMFSLKLSEGHHP-FSLSN-ILSVMNVAGKL 392 (465)
Q Consensus 316 ~s~~~~~~~GN~~taS~~l~L~~ll~~~-~~~~~G~rill~syGsG~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~L 392 (465)
+++.+.+++|||||||+|++|++++++. +++++||||+|+|||||+++++|+++++++..+ ...++ +.+.+++.++|
T Consensus 322 ~~~~~~~~~GNt~sASiplaL~~ll~~~~~~~~~GdrIll~~fGSGl~s~~fs~~v~~~~~~~~~~~~~~~~~~~~~~~L 401 (460)
T 2wya_A 322 ASLYLSTHNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSQDAAPGSPLDKLVSSTSDLPKRL 401 (460)
T ss_dssp GGGHHHHHHCCCGGGHHHHHHHHHHHHSCHHHHTTCEEEEEEEETTTEEEEEEEEECSCCSTTSHHHHHHHTTTTHHHHH
T ss_pred hhhhHHHhhCCcchhhHHHHHHHHHHhccccCCCCCEEEEEEecCCccceEEEEEEeCCccccchHHHHHHHhhhHHHHH
Confidence 9999999999999999999999999862 345699999999999999999999999984331 12223 46678999999
Q ss_pred ccCCcCCHHHHHHHHHHHHHhcCCCCcccCCCCCCCCCCcEEEEeeCCCceeEeeecc
Q 012353 393 KSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 450 (465)
Q Consensus 393 ~~R~~l~~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~v~~~~~R~Y~~~~ 450 (465)
++|+++|++||++++++|++.|+..+|.|.++.+.++||+|||++||++|||+|++||
T Consensus 402 ~~R~~~s~~~y~~~~~~r~~~~~~~~~~~~~~~~~~~~g~~~l~~i~~~~~R~Y~~~~ 459 (460)
T 2wya_A 402 ASRKCVSPEEFTEIMNQREQFYHKVNFSPPGDTNSLFPGTWYLERVDEQHRRKYARRP 459 (460)
T ss_dssp HTSEEECHHHHHHHHHHHHHHTTCCSBCCCSCGGGSCTTCEEEEEECTTSCEEEEECC
T ss_pred hcCccCCHHHHHHHHHHHHHhccCCCCCCCCcccccCCCcEEeeecCCCceEEEeecc
Confidence 9999999999999999999999999999999999999999999999999999999997
No 3
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-84 Score=682.56 Aligned_cols=448 Identities=51% Similarity=0.877 Sum_probs=408.3
Q ss_pred CceeEEeEEEEecCCceechHHHHHhcCCChhhhhhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEE
Q 012353 2 AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVG 81 (465)
Q Consensus 2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~ 81 (465)
||+|||.+|++|+|+++|++++|++..|++++||..|+|++++.++.++|++.+||++|+++||+++|++|++||+||++
T Consensus 22 ~~~vgI~aig~y~P~~~v~~~el~~~~g~~~~~~~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~li~~ 101 (478)
T 2p8u_A 22 SMDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNLMERNNLSYDCIGRLEVG 101 (478)
T ss_dssp HHCCEEEEEEEECCSEEEEHHHHHHHHTCCTTCCCCCCCCCEEECCCTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEE
T ss_pred CCceEEEEEEEECCCeEecHHHHHHHhCCChhHhecccCceEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 57899999999999999999999999999999998888888888888999999999999999999999999999999999
Q ss_pred eecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccccCCCCCcccc
Q 012353 82 SETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGG 161 (465)
Q Consensus 82 T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~G 161 (465)
|+|+++..|+++++|++.|+++|.++++++|+++||+||+.||++|..||++|.||.++||||++|++.|.++++++|||
T Consensus 102 T~t~~~~~ps~a~~v~~~L~~lG~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Eia~~~~~~~~~~fG 181 (478)
T 2p8u_A 102 TETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGG 181 (478)
T ss_dssp CSCCSCSSSCHHHHHGGGTTTTTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEECCCSSTTGGGCE
T ss_pred ccCCcccCccHHHHHHHHHhhcCCCCceEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeeeecccCCCCCCccc
Confidence 99999999999999998888766788999999999999999999999999999744699999999999998888899999
Q ss_pred cceeeeeecCCCCcccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhh-----hcCCC
Q 012353 162 AAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL-----EGKQF 236 (465)
Q Consensus 162 dGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~-----~~~~~ 236 (465)
|||+||||++++++.++....++++.+.+|||+|.++++||.+||++++.+|+.+++.+++.+.+++... .++++
T Consensus 182 dGA~A~Ll~~~~~~~l~~~~~gs~~~~~~d~~~p~~~~~~~~~dG~~s~~~y~~a~~~~~~~~~~~l~~~~~~~~~~~g~ 261 (478)
T 2p8u_A 182 VGAVALLIGPNAPLIFERGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDF 261 (478)
T ss_dssp EEEEEEEEESSCSEEECTTCCEEEECCCCSEECCCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred ceeEEEEEecCCCceEeeccceecccchhheeeecCCCcceEEcCcchHHHHHHHHHHHHHHHHHHHhhhccccccccCC
Confidence 9999999999987655554578888999999999988889999999999999999999998887776422 15688
Q ss_pred CCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCC
Q 012353 237 SLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQP 316 (465)
Q Consensus 237 ~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~ 316 (465)
.++|||+|+|||||.+|+++++++|.+++|...+....+..|+.+.++..++.+++|+|+++||++...+++.|.+|++|
T Consensus 262 ~~~did~~v~H~~~~ki~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ek~~~~~~~~~~~~k~~~ 341 (478)
T 2p8u_A 262 TLNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFSQKTKA 341 (478)
T ss_dssp CGGGCSEEEECCSSHHHHHHHHHHHHHHHHHHCTTGGGSGGGTTCGGGTTCCGGGCTTCHHHHHHHHHHTHHHHHHHTTG
T ss_pred ChHHcCEEEecCCcHHHHHHHHHHhCcccccccccccccccccccchhccCChhhcccchhHHHHHHHHhHHHHHHhHHH
Confidence 99999999999999999999999998887765544334445777777788999999999999999999999999999999
Q ss_pred CcccccccCccchhhHHHHHHHHHHhcCC--CCCCCEEEEEEeccchheeeeEEEEeCCCC-CCchhhHHhhc-cHHHHh
Q 012353 317 STLIPKQVGNMYTASLYAALASLIHNKHS--ELDGKRVVLFSYGSGLTATMFSLKLSEGHH-PFSLSNILSVM-NVAGKL 392 (465)
Q Consensus 317 s~~~~~~~GN~~taS~~l~L~~ll~~~~~--~~~G~rill~syGsG~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~L 392 (465)
++.+.+++|||||||+|++|++++++ ++ +++|++|+|+|||||++|++++++|+++.. +|.++++++.. ++.++|
T Consensus 342 ~~~~~~~~GN~~saSi~l~L~~ll~~-~~~~~~~Gdrill~s~GsG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L 420 (478)
T 2p8u_A 342 SLLVSNQNGNMYTSSVYGSLASVLAQ-YSPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRL 420 (478)
T ss_dssp GGHHHHHHCCCGGGHHHHHHHHHHHH-SCHHHHTTCEEEEEEEETTTEEEEEEEEECSCCCTTSHHHHHHHTTTTHHHHH
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHh-CCccCCCCCEEEEEEEcchhhhEEEEEEEeCCCCcchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998 66 679999999999999999999999998422 34499999988 999999
Q ss_pred ccCCcCCHHHHHHHHHHHHHhcCCCCcccCCCCCCCCCCcEEEEeeCCCceeEeeecc
Q 012353 393 KSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 450 (465)
Q Consensus 393 ~~R~~l~~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~v~~~~~R~Y~~~~ 450 (465)
++|+.+||+||++++++|++.|++++|+|.++.+.++||+|||++|+++|||+|++++
T Consensus 421 ~~r~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~r~Y~~~~ 478 (478)
T 2p8u_A 421 DSRTGVAPDVFAENMKLREDTHHLVNYIPQGSIDSLFEGTWYLVRVDEKHRRTYARRP 478 (478)
T ss_dssp HTSEECCHHHHHHHHHHHHHHTTCCSBCCCSCSTTSCTTCEEEEEECTTSCEEEEECC
T ss_pred hCCccCCHHHHHHHHHhhHhhcCCCCCCCCCCcccCCCceEEEeEEcCCCeEEEEeCC
Confidence 9999999999999999999999999999999988889999999999999999999864
No 4
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=100.00 E-value=7.2e-83 Score=666.71 Aligned_cols=447 Identities=85% Similarity=1.337 Sum_probs=408.0
Q ss_pred CceeEEeEEEEecCCceechHHHHHhcCCChhhhhhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEE
Q 012353 2 AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVG 81 (465)
Q Consensus 2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~ 81 (465)
||+|||.+|++|+|+++|++++|++..|.+++||++|+|++++++++++|++.+||++|++++|+++|++|++||+||++
T Consensus 1 ~~~v~I~~ig~y~P~~~v~~~~l~~~~g~~~~~~~~g~G~~~~~~~~~~e~~~~La~~Aa~~aL~~agi~~~~Id~li~~ 80 (450)
T 2f82_A 1 AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVG 80 (450)
T ss_dssp CCSCEEEEEEEECCSEEEEHHHHHHHTTCCTTTTTTTSCCCEEECCCTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEE
T ss_pred CCceEEEEEEEECCCeeccHHHHHHHhCCCHHHhhhhhCceeeeeCCCCCCHHHHHHHHHHHHHHHcCcCHHHCCEEEEE
Confidence 78999999999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred eecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccccCCCCCcccc
Q 012353 82 SETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGG 161 (465)
Q Consensus 82 T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~G 161 (465)
|+++++..|+++.+|++.||++|+++++++|+++||+||+.||.+|..||++|.+|+++||||++|++.|.+...+++||
T Consensus 81 t~t~~~~~p~~a~~v~~~lgl~g~~~~~~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~~~~~~~~~~fG 160 (450)
T 2f82_A 81 SETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAVYAEGPARPTGG 160 (450)
T ss_dssp CCCCSCSSSCHHHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEECCSSSTTGGGCE
T ss_pred ecCCCCCCCcHHHHHHHHhCCcCCCCceEEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeeccccCCCCCcccc
Confidence 99999999999999999999866678999999999999999999999999999766799999999999887767789999
Q ss_pred cceeeeeecCCCCcccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCC
Q 012353 162 AAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNA 241 (465)
Q Consensus 162 dGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~di 241 (465)
|||+||||++++++.++.+..++++.+++|||+|.++++||.++|+.++++|++.++.+++.+++++...+++|++++||
T Consensus 161 DGA~A~ll~~~~~~~~~~~~~g~~~~~~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~~~~~~~agl~~~di 240 (450)
T 2f82_A 161 AAAIAMLIGPDAPIVFESKLRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSINDA 240 (450)
T ss_dssp EEEEEEEEESSCSEEEEEEEEEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCGGGC
T ss_pred cceEEEEeccCCceEEEeccceeehhhccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHHhhhccccCCChhhc
Confidence 99999999998765444445677888889999998778899999999999999999999999998764323568999999
Q ss_pred ceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccc
Q 012353 242 DYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIP 321 (465)
Q Consensus 242 d~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~ 321 (465)
|+|++||||.+|+++++++|.+++|...+....+..|+++.++..++.+++|+||++||++.+++++.|++|+.||+.+.
T Consensus 241 d~~v~Hq~~~~i~~~~~~~L~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ek~~~~~~~~~~~~k~~~s~~~~ 320 (450)
T 2f82_A 241 DYFVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKVSQQLAKTYYDAKVQPTTLVP 320 (450)
T ss_dssp SEEEECCSSHHHHHHHHHHHHHHHHHTTCTTCCHHHHHHHGGGTTCCHHHHHTCHHHHHHHHHHHHHHHHHHTGGGCHHH
T ss_pred CEEEecCChHHHHHHHHHHhcccccccccccccccccccccccccccccccccchhHHHHHhhhhHHHHHHhhhHHHHHH
Confidence 99999999999999999999888776655443445566666677889999999999999999999999999999999999
Q ss_pred cccCccchhhHHHHHHHHHHhcCC-CCCCCEEEEEEeccchheeeeEEEEeCCCCCCchhhHHhhccHHHHhccCCcCCH
Q 012353 322 KQVGNMYTASLYAALASLIHNKHS-ELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEFPP 400 (465)
Q Consensus 322 ~~~GN~~taS~~l~L~~ll~~~~~-~~~G~rill~syGsG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~R~~l~~ 400 (465)
+++|||||||+|++|.+++++ ++ +++|++|+|+|||||+++++++++|.++..+|.++++++..++.++|++|+++||
T Consensus 321 ~~~GN~~saSi~l~L~~~l~~-~~~~~~Gd~ill~s~GsG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~ 399 (450)
T 2f82_A 321 KQVGNMYTASLYAAFASLVHN-KHSDLAGKRVVMFSYGSGSTATMFSLRLCENQSPFSLSNIASVMDVGGKLKARHEYAP 399 (450)
T ss_dssp HHHCCCGGGHHHHHHHHHHHH-HGGGCTTCEEEEEEEETTTEEEEEEEEECCCCTTSSHHHHHHHHCHHHHHHTCEECCH
T ss_pred HhcCchHHHHHHHHHHHHHHh-CccCCCCCEEEEEeecCCcccEEEEEEEeCCCcchhHHHHHHhccHHHHHhCCccCCH
Confidence 999999999999999999998 54 7799999999999999999999999985445559999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCcccCCC--CCCCCCCcEEEEeeCCCceeEeeec
Q 012353 401 ENFVEVMKLMEHRYGAKDFVTSKD--SSLLAPGTYYLTEVDSMYRRFYAKK 449 (465)
Q Consensus 401 ~ey~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~L~~v~~~~~R~Y~~~ 449 (465)
+||+++++.|++.|++++|+|.++ .+.++||+|||++|+++|||+|++|
T Consensus 400 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~r~Y~~~ 450 (450)
T 2f82_A 400 EKFVETMKLMEHRYGAKEFVTSKEGILDLLAPGTYYLKEVDSLYRRFYGKK 450 (450)
T ss_dssp HHHHHHHHHHHHHTTCCSEECCCTTTGGGSCTTCEEEEEECTTSCEEEEEC
T ss_pred HHHHHHHHHhHhhcCCCCCCCCCccccccCCCccEEEeEEcCCCeEEEeeC
Confidence 999999999999999999999988 6778899999999999999999975
No 5
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=100.00 E-value=1.3e-71 Score=570.58 Aligned_cols=382 Identities=28% Similarity=0.446 Sum_probs=334.3
Q ss_pred CCceeEEeEEEEecCCceechHHHHHhcCCChhhhhhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 012353 1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV 80 (465)
Q Consensus 1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 80 (465)
+.|+|+|.++++|+|+++|+++++++.+|.+++|+..|+|++++++++++|++.+||++|++++|++++ +++||+||+
T Consensus 4 ~~m~v~I~~~g~y~P~~~v~~~~l~~~~g~~~~~~~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~a~--~~~Id~li~ 81 (388)
T 3v4n_A 4 GSMTIGIDKISFFVPPYYIDMTALAEARNVDPGKFHIGIGQDQMAVNPISQDIVTFAANAAEAILTKED--KEAIDMVIV 81 (388)
T ss_dssp SSCCEEEEEEEEECCSEEEEHHHHHHHTTSCTHHHHTTTCCCEEECCCTTCCHHHHHHHHHHTTCCHHH--HHHEEEEEE
T ss_pred CceeEEEEEEEEECCCeEEcHHHHHHHhCCCHHHHHHHhCceEEEECCCCCCHHHHHHHHHHHHHHhCC--cccCCEEEE
Confidence 468999999999999999999999999999999998888999888999999999999999999999986 899999999
Q ss_pred EeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccccc-CCCCCcc
Q 012353 81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA-EGPARPT 159 (465)
Q Consensus 81 ~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~-~~~~~~t 159 (465)
+|+|+++..|+++.+|+++||+ .++++++|++++|+||+.||.+|..||++|. .++||||++|++++. +++++++
T Consensus 82 ~t~t~~~~~ps~a~~v~~~LGl--~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~--~~~vLVvg~e~~s~~~~~~~~~l 157 (388)
T 3v4n_A 82 GTESSIDESKAAAVVLHRLMGI--QPFARSFEIKEAXYGATAGLQLAKNHVALHP--DKKVLVVAADIAKYGLNSGGEPT 157 (388)
T ss_dssp ECSSCSBSSSCHHHHHHHHTTC--CSSCEEEEEESGGGHHHHHHHHHHHHHHHCT--TCEEEEEEEEEECCCTTCTTGGG
T ss_pred EeccCCCcCccHHHHHHHHcCC--CCCceEeehhhhhhHHHHHHHHHHHHHhcCC--CCEEEEEEehhhcccCCCCCCCc
Confidence 9999999999999999999998 5569999999999999999999999999995 499999999999764 4567899
Q ss_pred cccceeeeeecCCCCc-ccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 012353 160 GGAAAVVMLVGPDAPV-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSL 238 (465)
Q Consensus 160 ~GdGA~A~Ll~~~~~~-~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (465)
|||||+||||++++++ .++.. ...++.+.+|||+|. +..||.++|++++++|++.+++++++++++. |+++
T Consensus 158 fGDGA~A~ll~~~~~il~~~~~-~~~~~~~~~df~~p~-~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~------g~~~ 229 (388)
T 3v4n_A 158 QGAGAVAMLVSSEPRILALKED-NVMLTQDIYDFWRPT-GHPYPMVDGPLSNETYIQSFAQVWDEHKKRT------GLDF 229 (388)
T ss_dssp CEEEEEEEEEEESCSSEEECSC-CEEEECCCCSEECBT-TCSSCEECHHHHHHHHHHHHHHHHHHHHHHH------CCCG
T ss_pred cccceeEEEeecCCCceEEecc-ccccchhccccccCC-CCCCceeccHhHHHHHHHHHHHHHHHHHHHh------CCCH
Confidence 9999999999998864 44432 345667889999998 4668999999999999999999999999987 7999
Q ss_pred CCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCc
Q 012353 239 SNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPST 318 (465)
Q Consensus 239 ~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~ 318 (465)
+|||+|+|||||+||++|+..+++.. ..+ ..++.+....++++
T Consensus 230 ~did~~v~Hqp~~k~~~ka~~ril~~-----------------------~~~--------------~~~~~l~~~~e~~~ 272 (388)
T 3v4n_A 230 ADYDALAFHIPYTKMGKKALLAKISD-----------------------QTE--------------AEQERILARYEESI 272 (388)
T ss_dssp GGCSEEEECCSSHHHHHHHHHHHSTT-----------------------SCH--------------HHHHHHHHHHHHHT
T ss_pred HHCCEEEeCCCcchHHHHHHHHHHhc-----------------------ccH--------------HHHHHhCCCHHHHh
Confidence 99999999999999999998887421 000 00111111222344
Q ss_pred ccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEeCCCCCCchhhHHhhccHHHHhccCCcC
Q 012353 319 LIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEF 398 (465)
Q Consensus 319 ~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~R~~l 398 (465)
.+.+++|||||||+|++|.+++++.+++++|++|+|+|||+|+++++|++++++ +++++++..++.++|++|++|
T Consensus 273 ~~~~~~GN~~sASi~l~L~~~l~~~g~~~~Gd~ill~s~GsG~~ae~~~~~v~~-----~~~~~~~~~~~~~~l~~r~~~ 347 (388)
T 3v4n_A 273 IYSRRVGNLYTGSLYLGLISLLENATTLTAGNQIGLFSYGSGAVAEFFTGELVA-----GYQNHLQKETHLALLDNRTEL 347 (388)
T ss_dssp TTGGGTCCCGGGHHHHHHHHHHHHCSSCCTTCEEEEEEEETTTEEEEEEEEECT-----TGGGSCCHHHHHHHHHTCEEC
T ss_pred hHHHhcCchHHHHHHHHHHHHHHhcCcCCCCCEEEEEEecCcceeEEEEEEEcc-----CHHHHHHhhhHHHHHhCCccC
Confidence 455999999999999999999997456789999999999999999999999999 798888888999999999999
Q ss_pred CHHHHHHHHHHHHHhcCCCCcccCCCCCCCCCCcEEEEeeCCCceeEee
Q 012353 399 PPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYA 447 (465)
Q Consensus 399 ~~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~v~~~~~R~Y~ 447 (465)
||++|+++++. +|+|.++.+.+.+|+|||++|++ |+|+|+
T Consensus 348 ~~~~y~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~-~~r~y~ 387 (388)
T 3v4n_A 348 SIAEYEAMFAE--------TLDTDIDQTLEDELKYSISAINN-TVRSYR 387 (388)
T ss_dssp CHHHHHHHHHC--------CCCTTSCEECCCSSTTCEEEEET-TEEEEC
T ss_pred CHHHHHHHHhc--------cCCCCCccccCCCCCEEEeeeeC-CEeecC
Confidence 99999999863 66888888777899999999999 599996
No 6
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=100.00 E-value=9.1e-70 Score=561.19 Aligned_cols=385 Identities=25% Similarity=0.407 Sum_probs=324.1
Q ss_pred CceeEEeEEEEecCCceechHHHHHhcCCChhhhhhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEE
Q 012353 2 AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVG 81 (465)
Q Consensus 2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~ 81 (465)
+|+|+|.++++|+|+++|+++++++.+|.+++||+.|+|++++++++++|++.+||++|++++|++++ |++||+||++
T Consensus 34 ~m~v~I~~ig~ylP~~~v~n~el~~~~g~~~~~i~~~~Gi~~r~~a~~~e~~~~La~~Aa~~aL~~ag--~~dId~li~~ 111 (425)
T 3sqz_A 34 SMRIGIDKIGFTSSQYVLNMKDLAEARGEDPQKFSKGLLLNALSIAPITDDVVTLAAGSANEILTAED--KEKIDMVILA 111 (425)
T ss_dssp -CCEEEEEEEEECCSEEEEHHHHHHHHTCCHHHHHTTTCCCEEEECCTTSCHHHHHHHHHHTTCCHHH--HHHEEEEEEE
T ss_pred CCeEEEEEEEEECCCcEEcHHHHHHHhCCCHHHHHHHcCeEEEEECCCCCCHHHHHHHHHHHHHHhCC--hhhCCEEEEE
Confidence 58999999999999999999999999999999998888888888989999999999999999999987 9999999999
Q ss_pred eecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccccc-CCCCCccc
Q 012353 82 SETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA-EGPARPTG 160 (465)
Q Consensus 82 T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~-~~~~~~t~ 160 (465)
|+|+++..|+++++|+++||+ .++++++|+++||+||+.||.+|..||++|. .++||||++|++++. +++++++|
T Consensus 112 t~t~~~~~ps~a~~v~~~LGl--~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~--~~~vLVvgae~~s~~~~~~~~~lf 187 (425)
T 3sqz_A 112 TESSVDQSKAGAVYVHSLLGI--QPFARSFEMKEAAYSATAALNYAKLHVEKHP--DTRVLVLASDIAKYGIGTPGESTQ 187 (425)
T ss_dssp CSCCSCSSSCHHHHHHHHTTC--CSSCEEEEECCC-CHHHHHHHHHHHHHHHST--TCEEEEEEEEEECCCTTSGGGGGC
T ss_pred ecccccccchHHHHHHHHhCC--CCCeeEEEEcCHhHHHHHHHHHHHHHHHcCC--CCeEEEEEEehhcccCCCCCCCcc
Confidence 999999999999999999998 5569999999999999999999999999995 499999999999774 34568999
Q ss_pred ccceeeeeecCCCCc-ccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCC
Q 012353 161 GAAAVVMLVGPDAPV-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLS 239 (465)
Q Consensus 161 GdGA~A~Ll~~~~~~-~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (465)
||||+||||++++++ .++.. ...++.+.+|||+|. +..|+.++|++++++|++.+++++++++++. |++++
T Consensus 188 GDGA~A~ll~~~~~il~~~~~-s~~~~~d~~df~~p~-~~~~~~~dG~~~~~~~~~~l~~~~~~~l~~~------gl~~~ 259 (425)
T 3sqz_A 188 GAGSIAMLVKKDPRILILHDE-TLAQTRDIMDFWRPN-YTTTPYVNGMYSTKQYLDMLKTTWAEYQKRF------DVSLT 259 (425)
T ss_dssp EEEEEEEEEEESCSSEEECSC-CEEEECCCCSEECCT-TCSSCEECHHHHHHHHHHHHHHHHHHHHHHH------TCCGG
T ss_pred cceeeEEEeecCCceEEEEee-cccchhhcccccccC-CCcceeeccHhHHHHHHHHHHHHHHHHHHHh------CCCHH
Confidence 999999999998864 44432 445667889999998 4668999999999999999999999999987 79999
Q ss_pred CCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcc
Q 012353 240 NADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTL 319 (465)
Q Consensus 240 did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~ 319 (465)
|||+|+|||||+||++|+.++++.. ..++ ..++.+....++++.
T Consensus 260 Did~~v~Hqp~~k~~~ka~~ril~~-----------------------~~~~-------------~~~~~l~~~~e~~~~ 303 (425)
T 3sqz_A 260 DFAAFCFHLPFPKLALKGFNKIMDK-----------------------QVPS-------------DLQEKLKVNFEASIL 303 (425)
T ss_dssp GCSEEEECCSSHHHHHHHHHHHCCT-----------------------TSCH-------------HHHHHHHHHHHHHHT
T ss_pred HCCEEEECCCcchhHHHHHHHHHhc-----------------------cchH-------------HHHHHhCCCHHHHhh
Confidence 9999999999999999998887410 0000 001111111222333
Q ss_pred cccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEeCCCCCCchhhHHhhccHHHHhccCCcCC
Q 012353 320 IPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEFP 399 (465)
Q Consensus 320 ~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~R~~l~ 399 (465)
+.+++|||||||+|++|.+++++.+++++|++|+|+|||+|+++++|+++|++ ++++++++ ++.++|++|++||
T Consensus 304 ~~~~~GNt~sASi~l~L~~~l~~~g~l~~Gd~ill~s~GsG~~ae~~s~~v~~-----~~~~~~~~-~~~~~l~~r~~~~ 377 (425)
T 3sqz_A 304 YSKQIGNIYTGSLFLGLLSLLENSQNLVAGDKIALFSYGSGAVAEIFTGTLVK-----GFKEQLQT-NRLDKLKRRTPLS 377 (425)
T ss_dssp THHHHBCCGGGHHHHHHHHHHHHCSSCCTTCEEEEEEEETTTEEEEEEEEECT-----TGGGGSCS-CHHHHHHTSEECC
T ss_pred HHhccCccHHHHHHHHHHHHHHhcCCCCCCCEEEEEcccCCcceEEEEEEEcc-----cHHHHHhh-hHHHHHhCCccCC
Confidence 45999999999999999999997346789999999999999999999999999 78888877 9999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCCCC--CCCCCCcEEEEeeCCCceeEeeec
Q 012353 400 PENFVEVMKLMEHRYGAKDFVTSKDS--SLLAPGTYYLTEVDSMYRRFYAKK 449 (465)
Q Consensus 400 ~~ey~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~L~~v~~~~~R~Y~~~ 449 (465)
|+||++++.. ...+...++. .....++|+|++|++ |+|+|++.
T Consensus 378 ~~~y~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~r~y~~~ 422 (425)
T 3sqz_A 378 VENYEKIFFE------EAQLDDKGNASFKEYQTGPFALKEILE-HQRIYGKV 422 (425)
T ss_dssp HHHHHHHHTC------CCCCCTTSCEECCCCCCSSEEEEEEET-TEEEEEEC
T ss_pred HHHHHHHHhh------ccccCcccccccccCCCCcEEEeeecC-CEEEeecC
Confidence 9999999831 1111112221 123447899999998 89999874
No 7
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=100.00 E-value=1.2e-68 Score=551.32 Aligned_cols=387 Identities=25% Similarity=0.429 Sum_probs=343.1
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcCCChhhhhhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEe
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T 82 (465)
|+|+|.++++|+|+++|+++++++..|.+++||..++|++++.+++++|++.+|+++|++++|++ ++|++||.||++|
T Consensus 1 m~v~I~~ig~y~P~~~v~~~~l~~~~~~~~~~i~~~~Gi~~r~~~~~~e~~~~la~~Aa~~aL~~--~~~~~Id~li~~t 78 (396)
T 1xpm_A 1 MAIGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTEMAVSPVNQDIVSMGANAAKDIITD--EDKKKIGMVIVAT 78 (396)
T ss_dssp -CEEEEEEEEECCSEEEEHHHHHHHTTSCHHHHHTTTCCSEEEECCTTCCHHHHHHHHHHTTCCH--HHHHHEEEEEEEC
T ss_pred CceEEEEEEEeCCCeEecHHHHHHHhCCCHHHHhhhcCceEEEeCCCCCCHHHHHHHHHHHHHhc--CCHHHCCEEEEEe
Confidence 57999999999999999999999999999999977777777778889999999999999999988 7899999999999
Q ss_pred ecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccccc-CCCCCcccc
Q 012353 83 ETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA-EGPARPTGG 161 (465)
Q Consensus 83 ~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~-~~~~~~t~G 161 (465)
+++++..|+++.+|+..||+ ..++++++++++|+||+.||.+|..+|++|. .++||||++|..++. +++.+++||
T Consensus 79 ~~~~~~~p~~a~~v~~~lGl--~~~~~~~~v~~aC~sg~~Al~~A~~~I~sg~--~~~vLvvg~e~s~~~~~~~~~~~~G 154 (396)
T 1xpm_A 79 ESAVDAAKAAAVQIHNLLGI--QPFARCFEMKEACYAATPAIQLAKDYLATRP--NEKVLVIATDTARYGLNSGGEPTQG 154 (396)
T ss_dssp SSCSBSSSCHHHHHHHHTTC--CSSCEEEEEESTTTTHHHHHHHHHHHHTTCT--TCEEEEEEEEEECCCTTCSSGGGCE
T ss_pred CCCCCCCCCHHHHHHHHhCC--CCCceEEEeccccHHHHHHHHHHHHHHHcCC--CCEEEEEeehhhccccCCCCCcccc
Confidence 99999999999999999998 5569999999999999999999999999995 499999999987663 445689999
Q ss_pred cceeeeeecCCCCc-ccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 012353 162 AAAVVMLVGPDAPV-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240 (465)
Q Consensus 162 dGA~A~Ll~~~~~~-~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~d 240 (465)
|||+||||++++.+ .+..+ .++++.+.++||+|... .++.++|+.++++|++.+.++++.++++. |++++|
T Consensus 155 dGA~A~vl~~~~~i~~~~~~-~g~~~~d~~~~~~p~~~-~~~~~~G~~~~~~~~~~~~~~~~~~L~~a------gl~~~d 226 (396)
T 1xpm_A 155 AGAVAMVIAHNPSILALNED-AVAYTEDVYDFWRPTGH-KYPLVDGALSKDAYIRSFQQSWNEYAKRQ------GKSLAD 226 (396)
T ss_dssp EEEEEEEEEESCSSEEECSC-CEEEECCCCSEECBTTC-SSCEECHHHHHHHHHHHHHHHHHHHHHHH------TCCGGG
T ss_pred cceEEEEeccCCceEEEEec-cccccceEEEeeccCCC-CCeEEEcHHHHHHHHHHHHHHHHHHHHHc------CCCHHH
Confidence 99999999988764 44444 67778888999999743 47889999999999999999999999887 789999
Q ss_pred CceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCccc
Q 012353 241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLI 320 (465)
Q Consensus 241 id~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~ 320 (465)
||+|++|||+++|++++.++|+... ..+.++.|..+++||+.+
T Consensus 227 id~~~~H~~~~~~~~~~~~~l~~~~-------------------------------------~~~~~e~~~~~~~~s~~~ 269 (396)
T 1xpm_A 227 FASLCFHVPFTKMGKKALESIIDNA-------------------------------------DETTQERLRSGYEDAVDY 269 (396)
T ss_dssp CSEEEECCSSHHHHHHHHHTTGGGS-------------------------------------CHHHHHHHHHHHHHHTTG
T ss_pred CCEEEecCCchHHHHHHHHHHHhhc-------------------------------------ccCCHHHHHHHhhhhhhh
Confidence 9999999999999999998884210 023345567788999999
Q ss_pred ccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEeCCCCCCchhhHHhhccHHHHhccCCcCCH
Q 012353 321 PKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGHHPFSLSNILSVMNVAGKLKSRHEFPP 400 (465)
Q Consensus 321 ~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~R~~l~~ 400 (465)
.+++|||||||+|++|.+++++ +++++|++|+|+|||+|+++++|+++|++ +++++++..++.++|++|+++||
T Consensus 270 ~~~~GN~~saSi~l~L~~~l~~-~~l~~Gd~ill~s~GsG~~~~~~~~~v~~-----~~~~~~~~~~~~~~l~~r~~~~~ 343 (396)
T 1xpm_A 270 NRYVGNIYTGSLYLSLISLLEN-RDLQAGETIGLFSYGSGSVGEFYSATLVE-----GYKDHLDQAAHKALLNNRTEVSV 343 (396)
T ss_dssp GGGTCCCGGGHHHHHHHHHHHH-SCCCTTCEEEEEEEETTTEEEEEEEEECT-----TGGGGCCHHHHHHHHHTCEECCH
T ss_pred hhhcCchHHHHHHHHHHHHHHc-CCCCCCCEEEEEEECcchhheEEEEEEcc-----cHHHHhhcccHHHHHhCCccCCH
Confidence 9999999999999999999998 78889999999999999999999999999 79998888899999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCcccCCCCCCCCCCcEEEEeeCCCceeEeeecc
Q 012353 401 ENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSMYRRFYAKKP 450 (465)
Q Consensus 401 ~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~v~~~~~R~Y~~~~ 450 (465)
+||+++++.|++.+. +|.++.+.++||+|||++|+++|||+|.+|.
T Consensus 344 ~~y~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~ 389 (396)
T 1xpm_A 344 DAYETFFKRFDDVEF----DEEQDAVHEDRHIFYLSNIENNVREYHRPEL 389 (396)
T ss_dssp HHHHHHHHHHHTTCC----CTTTTTGGGGTTSCEEEEEETTEEEEECCTT
T ss_pred HHHHHHHHhhhhccc----CCCCccccCCCCCEEEeEecccEEEEEEEec
Confidence 999999999887663 6667777678999999999998877777664
No 8
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=100.00 E-value=4.8e-52 Score=420.94 Aligned_cols=307 Identities=18% Similarity=0.172 Sum_probs=253.2
Q ss_pred CceeEEeEEEEecCCceechHHHHHhcCCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEE
Q 012353 2 AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLE 79 (465)
Q Consensus 2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li 79 (465)
|....|.++|.|+|+++|+|+|+++..+.+.+|+ ++||.+|+++ .++|++.+||++|+++||+++|++|++||+||
T Consensus 11 ~~~srI~g~g~ylP~~~v~n~el~~~~~~~~e~I~~rtGI~~R~~a--~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li 88 (350)
T 4ewp_A 11 PAASRIVAVGAYRPANLVPNEDLIGPIDSSDEWIRQRTGIVTRQRA--TAEETVPVMAVGAAREALERAGLQGSDLDAVI 88 (350)
T ss_dssp CSEEEEEEEEEECCSCEEEHHHHTTTTTCCHHHHHHHHCCSEEECC--CSSCCHHHHHHHHHHHHHHHTTCCGGGCSEEE
T ss_pred CCCCEEEEEEEEcCCCeEcHHHHHHHhCCCHHHHHhccCceEEEEc--CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 5678899999999999999999999999999998 4899999854 78999999999999999999999999999999
Q ss_pred EEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc-cCC---C
Q 012353 80 VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEG---P 155 (465)
Q Consensus 80 ~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~---~ 155 (465)
++|+|+++..|+++++||++||+ +++.+||+++||+|++.||.+|..+|++|.. ++||||++|.++. .++ .
T Consensus 89 ~~t~t~~~~~P~~a~~v~~~LGl---~~~~a~di~~~C~g~~~aL~~A~~~i~~g~~--~~~Lvv~~E~~s~~~d~~~~~ 163 (350)
T 4ewp_A 89 VSTVTFPHATPSAAALVAHEIGA---TPAPAYDVSAACAGYCYGVAQADALVRSGTA--RHVLVVGVERLSDVVDPTDRS 163 (350)
T ss_dssp EECSCCSCSSSCHHHHHHHHTTC---TTSCEEEEECGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEEEGGGGCCTTCTT
T ss_pred EEeccCCCCCCchHHHHHHHhCC---CCceEEEeecchhhHHHHHHHhhhhhhCCCc--cceeEeeeeeceecccccccc
Confidence 99999999999999999999997 5567999999999999999999999999954 9999999999843 333 3
Q ss_pred CCcccccceeeeeecCCCCccccc---ccccccccCc------------ccccccCC---------C--CCCcccCCchh
Q 012353 156 ARPTGGAAAVVMLVGPDAPVAFES---KLRGSHMSHA------------YDFYKPNL---------A--SEYPVVDGKLS 209 (465)
Q Consensus 156 ~~~t~GdGA~A~Ll~~~~~~~~~~---~~~~~~~~~~------------~df~~p~~---------~--~~~p~~dg~~s 209 (465)
...+|||||+|+||++.+...+.. +..|...... .+.++... . ..+..++|+..
T Consensus 164 ~~~lfgDGA~A~vl~~~~~~~~~~~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 243 (350)
T 4ewp_A 164 ISFLLGDGAGAVIVAASDEPGISPSVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSV 243 (350)
T ss_dssp TGGGBCEEEEEEEEEEESSCCBCCCEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHH
T ss_pred cccccccchheeeeecccCCCccceeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhHHH
Confidence 457899999999998765321111 1111111100 00011000 0 01234678777
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCC
Q 012353 210 QTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSG 289 (465)
Q Consensus 210 ~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 289 (465)
++..++.+++++++++++. |++++|||+|++||++.++++++.++| ++|.
T Consensus 244 ~~~a~~~~~~~i~~~L~~~------gl~~~did~~v~Hq~~~~i~~~~~~~L------------------------gl~~ 293 (350)
T 4ewp_A 244 FRWAVWSMAKVAREALDAA------GVEPEDLAAFIPHQANMRIIDEFAKQL------------------------KLPE 293 (350)
T ss_dssp HHHHHHTHHHHHHHHHHHH------TCCGGGEEEEEECCSCHHHHHHHHHHT------------------------TCCT
T ss_pred HHHHHHhhhHHHHHHHHhh------cCChhHhceEEecCCCHHHHHHHHHHc------------------------CcCh
Confidence 7766778888888888876 799999999999999999999999988 7887
Q ss_pred CccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEE
Q 012353 290 DESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLK 369 (465)
Q Consensus 290 ~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~ 369 (465)
++.+.+ ++ +++|||++||+|++|..++++ +++++|++|+|++||+|++|++.+++
T Consensus 294 ~~~~~~--------~l----------------~~~GNtssasi~~~L~~~~~~-g~~~~Gd~vll~~fG~G~t~~~~vlr 348 (350)
T 4ewp_A 294 SVVVAR--------DI----------------ADAGNTSAASIPLAMHRLLEE-NPELSGGLALQIGFGAGLVYGAQVVR 348 (350)
T ss_dssp TSEECC--------TH----------------HHHCBCGGGHHHHHHHHHHHH-CGGGTTSEEEEEEEETTTEEEEEEEE
T ss_pred HhEEec--------cc----------------ccccchHHHHHHHHHHHHHHh-CCCCCcCEEEEEEEchhhEeEEEEEE
Confidence 765421 33 799999999999999999998 88999999999999999999999999
Q ss_pred E
Q 012353 370 L 370 (465)
Q Consensus 370 ~ 370 (465)
|
T Consensus 349 ~ 349 (350)
T 4ewp_A 349 L 349 (350)
T ss_dssp C
T ss_pred e
Confidence 7
No 9
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=100.00 E-value=1.1e-49 Score=399.14 Aligned_cols=305 Identities=17% Similarity=0.191 Sum_probs=256.0
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcCCChhhhh--hhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYT--IGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV 80 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~--~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 80 (465)
|+..|.+++.|+|+.+|+++++++..+.+++|+. +||.+|+ ++.++|++.+|+++|++++|+++|++|++||.||+
T Consensus 8 ~~~~~~~~g~ylP~~~v~n~~l~~~~~~~~~~i~~~tGi~~R~--~a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~ 85 (323)
T 3il3_A 8 MNSRILSTGSYLPSHIRTNADLEKMVDTSDEWIVTRSGIRERR--IAAEDETVATMGFEAAKNAIEAAQINPQDIELIIV 85 (323)
T ss_dssp CEECCCEEEEECCSCEEEHHHHHTTSSCCHHHHHHHTCCCEEE--CCCTTCCHHHHHHHHHHHHHHHHCCCGGGCCEEEE
T ss_pred ccCceeEEEEECCCceEcHHHHHHHhCCCHHHHHHhcCCcEEE--ECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 6789999999999999999999999999999984 6777766 55889999999999999999999999999999999
Q ss_pred EeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc-cCCC---C
Q 012353 81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGP---A 156 (465)
Q Consensus 81 ~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~---~ 156 (465)
+|+++++..|+++.+|+..||+ +++++++++++|+|++.||.+|..+|++|.. ++||||++|.++. .++. .
T Consensus 86 ~t~~~~~~~p~~a~~v~~~lGl---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~vLvvg~e~~s~~~~~~d~~~ 160 (323)
T 3il3_A 86 ATTSHSHAYPSAACQVQGLLNI---DDAISFDLAAACTGFVYALSVADQFIRAGKV--KKALVIGSDLNSRKLDETDRST 160 (323)
T ss_dssp ECSCCSCSSSCHHHHHHHHTTC---SSCEEEEECCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEEEGGGSCCTTCTTT
T ss_pred EeCCCCCCCccHHHHHHHHhCC---CCccEEEECCccHHHHHHHHHHHHHHHCCCC--CEEEEEEeeccccccCcccccc
Confidence 9999988899999999999997 5789999999999999999999999999965 9999999999853 2332 3
Q ss_pred CcccccceeeeeecCCCCcccccccccccccCcccccccC-----CCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhh
Q 012353 157 RPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPN-----LASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL 231 (465)
Q Consensus 157 ~~t~GdGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~-----~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~ 231 (465)
..+|||||+|+||++++...+......+........+.|. ....|..++|+.+++.+.+.+++++++++++.
T Consensus 161 ~~lfGDGA~A~vl~~~~~~~i~~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~--- 237 (323)
T 3il3_A 161 VVLFGDGAGAVILEASEQEGIISTHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEETLLAN--- 237 (323)
T ss_dssp TTTBCEEEEEEEEEEESSCCEEEEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred ccccccceEEEEEEEcCCCCeEEEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHHHHHc---
Confidence 4679999999999976521111001111111111122332 12235567899888888899999999888776
Q ss_pred hcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhh
Q 012353 232 EGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYD 311 (465)
Q Consensus 232 ~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~ 311 (465)
|++++|||+|++||++.++++++.++| +++.++.+. ++
T Consensus 238 ---gl~~~did~~v~Hq~~~~i~~~~~~~l------------------------gl~~ek~~~---------~l------ 275 (323)
T 3il3_A 238 ---NLDKKDLDWLVPHQANLRIITATAKKL------------------------EMDMSQVVV---------TL------ 275 (323)
T ss_dssp ---TCCTTTCCEEEECCSCHHHHHHHHHHT------------------------TCCGGGBCC---------CH------
T ss_pred ---CCCHHHCCEEEEcCCCHHHHHHHHHHc------------------------CcCHHHhhc---------cH------
Confidence 799999999999999999999999988 788776542 34
Q ss_pred hccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEE
Q 012353 312 AKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL 370 (465)
Q Consensus 312 ~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~ 370 (465)
+++|||++||+|++|.+++++ +++++|++|+|++||+|++|++++++|
T Consensus 276 ----------~~~GNt~sasi~~~L~~~~~~-g~~~~Gd~vll~~~G~G~t~~~~~l~~ 323 (323)
T 3il3_A 276 ----------DKYANNSAATVPVALDEAIRD-GRIQRGQLLLLEAFGGGWTWGSALVRF 323 (323)
T ss_dssp ----------HHHCBCGGGHHHHHHHHHHHT-TSSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred ----------hhcCchHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEehhheeEEEEEEC
Confidence 799999999999999999998 889999999999999999999999986
No 10
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=100.00 E-value=1.1e-47 Score=390.95 Aligned_cols=306 Identities=15% Similarity=0.137 Sum_probs=253.6
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc-CCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEE
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD-GASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLE 79 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~-g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li 79 (465)
++++|.+++.|+|+.+|+++++++.. +.+.+|+ ++||.+|++ +.++|+..+|+++|++++|+++|++|++||.||
T Consensus 29 ~~v~I~gig~~lP~~~v~n~~l~~~~~~~~~~~i~~~tGI~~R~~--a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi 106 (365)
T 3gwa_A 29 PRAAIADIAGHLPEQVLTNDVLAQLYPDWPAEKILAKTGIRERRI--AAPRETAADLAYEAARKLFAQGAVGADQVDFVI 106 (365)
T ss_dssp CEEEEEEEEEECCSEEEEHHHHHHHCTTCCHHHHHHHHCCCEEEE--CCTTCCHHHHHHHHHHHHHHTTSCCGGGCCEEE
T ss_pred ccEEEEEEEEeCCCcEEcHHHHHHHccCCCHHHHHHhcCccEEEE--CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 57999999999999999999999998 6788887 478888885 478999999999999999999999999999999
Q ss_pred EEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc-cCCCC--
Q 012353 80 VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGPA-- 156 (465)
Q Consensus 80 ~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~~-- 156 (465)
++|++++...|+++.+|+..||+ ..++.+++++++|+|++.||.+|..+|++|.. ++||||++|.++. .++.+
T Consensus 107 ~~t~~~~~~~p~~a~~v~~~lGl--~~~~~~~~v~~~C~s~~~Al~~A~~~i~~g~~--~~vLvvg~e~~s~~~~~~dr~ 182 (365)
T 3gwa_A 107 LCTQAPDYVLPTSACMLQHRLGI--PTHAGALDVNLGCSGYVYGLSLAKGLVETGAA--RCVLLLTADTYSKYLHPLDKS 182 (365)
T ss_dssp EEESSCSCSBSCHHHHHHHHTTC--CTTSEEEEEECSTTHHHHHHHHHHHHHHTTSC--SEEEEEEEECGGGGSCTTCHH
T ss_pred EEeCCCCCCCCcHHHHHHHHcCC--CCCceEEEecccChHHHHHHHHHHHHHHcCCC--CEEEEEEEchhhccCCccccc
Confidence 99999988899999999999998 45899999999999999999999999999965 9999999999854 23333
Q ss_pred -CcccccceeeeeecCCCCc--ccccccccccccCcccccccCCC----------------------CCCcccCCchhHH
Q 012353 157 -RPTGGAAAVVMLVGPDAPV--AFESKLRGSHMSHAYDFYKPNLA----------------------SEYPVVDGKLSQT 211 (465)
Q Consensus 157 -~~t~GdGA~A~Ll~~~~~~--~~~~~~~~~~~~~~~df~~p~~~----------------------~~~p~~dg~~s~~ 211 (465)
..+|||||+|+||++++.. .+......+.......++.|.++ ..+..++|+..++
T Consensus 183 ~~~lfGDGAaA~vl~~~~~~~~~i~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~ 262 (365)
T 3gwa_A 183 VRTLFGDGASATAVIAEHGELERIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMA 262 (365)
T ss_dssp HHTTBCCEEEEEEEEEECSSSCSEEEEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHH
T ss_pred ccccccceeEEEEEEecCCCCCceEEEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHHHH
Confidence 4679999999999986531 11110111111111111222111 1234567777777
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCc
Q 012353 212 CYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDE 291 (465)
Q Consensus 212 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 291 (465)
...+.+++++++++++. |++++|||+|++||++.++++.+.++| +++.++
T Consensus 263 ~~~~~~~~~i~~~L~~~------gl~~~did~~v~Hq~n~~i~~~~~~~L------------------------gl~~ek 312 (365)
T 3gwa_A 263 FSLAEVPRAADRLLALA------GEPRENIDCFVLHQANRFMLDALRKKM------------------------KIPEHK 312 (365)
T ss_dssp HHHHHHHHHHHHHHHHH------TCCGGGCSEEEECCCCHHHHHHHHHHH------------------------TCCGGG
T ss_pred HHHHHHHHHHHHHHHHc------CCCHHHCCEEEEcCCCHHHHHHHHHHh------------------------CCCHHH
Confidence 77788888888888876 799999999999999999999999998 788776
Q ss_pred cccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEE
Q 012353 292 SYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL 370 (465)
Q Consensus 292 ~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~ 370 (465)
.+. ++ +++|||++||+|++|.+++++ +++++|++|+|++||+|++|++++++|
T Consensus 313 ~~~---------~l----------------~~~GNtssAsipl~L~~~~~~-g~~~~Gd~vll~~fG~G~t~~~~ll~~ 365 (365)
T 3gwa_A 313 FPV---------LM----------------EHCGNTVSSTLPLALETMRAN-GTLARGMRLMLLGFGVGYSWAGCLVNF 365 (365)
T ss_dssp SCC---------CC----------------TTTCBCGGGHHHHHHHHHHHT-TCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHH---------HH----------------hcccchHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEehhheeEEEEEEC
Confidence 542 34 899999999999999999998 889999999999999999999999987
No 11
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=100.00 E-value=2.2e-48 Score=394.70 Aligned_cols=307 Identities=15% Similarity=0.130 Sum_probs=254.5
Q ss_pred eeEEeEEEEecCCceechHHHHHhcCCCh-hhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 012353 4 NVGILAMDIYFPPTCVQQEALEAHDGASK-GKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV 80 (465)
Q Consensus 4 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~-~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 80 (465)
+++|.+++.|+|+++|+++++++..+.++ +|+ .+||.+|+ ++.++|+..+|+++|++++|+++|++|++||.||+
T Consensus 16 ~v~I~~ig~~lP~~~v~n~~l~~~~~~~~~~~i~~~tGI~~R~--~a~~~~~~~~La~~Aa~~aL~~agi~~~~Id~vi~ 93 (354)
T 4efi_A 16 GARIAGVVSCVPSKQVDNDYFVERFDASAVRDVVKMIGVNRRR--WADAQTSAGDLCRKAGEKLLAGLGWQADSIDALIF 93 (354)
T ss_dssp SEEEEEEEEEECSCEEEGGGGTTTSCHHHHHHHHHHHCCSEEE--CCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEE
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHhCCCcHHHHHHhcCCeEEE--EcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 58999999999999999999999887644 777 47888877 45789999999999999999999999999999999
Q ss_pred EeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc-cCCCC---
Q 012353 81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGPA--- 156 (465)
Q Consensus 81 ~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~~--- 156 (465)
+|+++++..|+++.+|++.||+ +.++.+++++++|+|++.||.+|..+|++|.. ++||||++|.++. .++.+
T Consensus 94 ~t~~~~~~~p~~a~~v~~~lGl--~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~--~~vLvvg~e~~s~~~~~~d~~~ 169 (354)
T 4efi_A 94 VSQTPNYRLPATAFVLQAELDL--PASCLALDINLGCSGYPQALWLGMNLIQTGAA--KRVLLAVGDTISKMIDPTDRST 169 (354)
T ss_dssp ECSSCSCSSSCHHHHHHHHTTC--CTTSEEEEECCCTTHHHHHHHHHHHHHHTTSC--SEEEEEEEECGGGGCCTTCHHH
T ss_pred EeCCCCCCCCcHHHHHHHHcCc--CCCccEEeeCcccHHHHHHHHHHHHHHHCCCC--CEEEEEEechhcccCCcccccc
Confidence 9999998899999999999997 56899999999999999999999999999965 9999999999853 33333
Q ss_pred CcccccceeeeeecCCCCcccccccccccccCcccccccCCCC----------------CCcccCCchhHHHHHHHHHHH
Q 012353 157 RPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLAS----------------EYPVVDGKLSQTCYLMALDTC 220 (465)
Q Consensus 157 ~~t~GdGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~~~~----------------~~p~~dg~~s~~~y~~~~~~~ 220 (465)
..+|||||+|+||++++...+......+.......++.|.++. .+..++|+..++...+.++++
T Consensus 170 ~~lfGDGA~A~vl~~~~~~~~~~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~ 249 (354)
T 4efi_A 170 SLLFGDAGTMTALETSNGDAAAHFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNAVPKL 249 (354)
T ss_dssp HTTBCCEEEEEEEEECCSCCEEEEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHHHHHH
T ss_pred ccccccceeEEEEeecCCCCceEEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHHHHHHHHH
Confidence 3689999999999987642110101122222222233332211 134567776666667888888
Q ss_pred HHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHH
Q 012353 221 YKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEK 300 (465)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k 300 (465)
+++++++. |++++|||+|++||++.++++++.++| +++.++.+.
T Consensus 250 i~~~l~~~------gl~~~did~~v~Hq~~~~i~~~~~~~L------------------------gl~~ek~~~------ 293 (354)
T 4efi_A 250 VSRTLDIA------GRDKDSYDAFLFHQANLFMLKHLAKKA------------------------GLPAERVPV------ 293 (354)
T ss_dssp HHHHHHHH------TCCGGGCSEEEECCCCHHHHHHHHHHT------------------------TCCGGGSCC------
T ss_pred HHHHHHHc------CCCHHHCCEEEeCCCCHHHHHHHHHHh------------------------CcCHHHHHH------
Confidence 88888876 799999999999999999999999988 788776542
Q ss_pred HHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEeC
Q 012353 301 VSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 301 ~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~~ 372 (465)
++ +++|||++||+|++|.+++++ +++++|++|+|++||+|++|++++++|.+
T Consensus 294 ---~l----------------~~~GNt~sasi~~~L~~~~~~-g~~~~Gd~vll~~fG~G~t~~~~ll~~~~ 345 (354)
T 4efi_A 294 ---NI----------------GEYGNTSCASIPLLITTELKD-RLKEETLQLGMFGFGVGYSWASAALAVGP 345 (354)
T ss_dssp ---CH----------------HHHCBCGGGHHHHHHHHHSHH-HHHHSCEEEEEEEEETTTEEEEEEEEECC
T ss_pred ---HH----------------hhhCcHHHHHHHHHHHHHHHh-CCCCCCCEEEEEEEchhhhheeeEEEECC
Confidence 34 899999999999999999988 67789999999999999999999999986
No 12
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=100.00 E-value=1.5e-47 Score=385.53 Aligned_cols=305 Identities=17% Similarity=0.180 Sum_probs=254.3
Q ss_pred ceeEEeEEEEecCCceechHHHHHh-----cCCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCc
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAH-----DGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQI 75 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~-----~g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~I 75 (465)
|+|+|.++++|+|+.+++++++++. .+.+.+|+ ++||++|++ +.++|+..+|+++|++++|+++|+++++|
T Consensus 10 m~v~I~g~g~~lP~~~v~~~~l~~~l~~~~~~~~~~~i~~rtgi~~r~~--~~~~~~~~~la~~Aa~~al~~ag~~~~~I 87 (333)
T 4dfe_A 10 IYSRVLGTGSYLPPNRVTNQDLAKRLAEQGIETSDEWIVARTGIHARYF--AEPDVTTSDLAFIASQRAIEAADIDPQSI 87 (333)
T ss_dssp CEEEEEEEEEECCSEEEEHHHHHHHHC---CCCCHHHHHHHHCCSEEEE--CCTTCCHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred cceEEEEEEEECCCcEEcHHHHHHHhccccCCCCHHHhHHhcCceEEEE--cCCCCCHHHHHHHHHHHHHHHcCCCHHHC
Confidence 5799999999999999999999998 56667887 468888774 47899999999999999999999999999
Q ss_pred cEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc-cCC
Q 012353 76 GRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEG 154 (465)
Q Consensus 76 d~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~ 154 (465)
|.|+++|+++++..|+++.+|+..||+ ++++.+++++++|+|++.||.+|..+|++|.. ++||||++|..+. .++
T Consensus 88 d~vi~~t~~~~~~~p~~a~~v~~~lgl--~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~vLvvg~e~~s~~~~~ 163 (333)
T 4dfe_A 88 DLIIVATSTPDFVFPSTACLLQNKLGI--RNHGAAFDVQAVCSGFAYAVATADSFIRSGQH--RTALVIGAETFSRILDF 163 (333)
T ss_dssp CEEEEECSSCSSSBSCHHHHHHHHTTC--CSCCEEEEEECGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEEEGGGGCCT
T ss_pred CEEEEEeCCCCCCCCcHHHHHHHHhCC--CCCCcEEEeCcccHHHHHHHHHHHHHHHcCCC--CEEEEEEeeccccccCc
Confidence 999999999998899999999999998 57899999999999999999999999999965 9999999999843 222
Q ss_pred C---CCcccccceeeeeecCCCCcccccccccccccCcccccc-cCC-------CCCCcccCCchhHHHHHHHHHHHHHH
Q 012353 155 P---ARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYK-PNL-------ASEYPVVDGKLSQTCYLMALDTCYKC 223 (465)
Q Consensus 155 ~---~~~t~GdGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df~~-p~~-------~~~~p~~dg~~s~~~y~~~~~~~~~~ 223 (465)
. ...+|||||+|+||++.+...+......+... ..+.++ |.. ...|..++|+.+++.+.+.+.+++++
T Consensus 164 ~d~~~~~lfGDGA~A~vl~~~~~~~i~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~ 242 (333)
T 4dfe_A 164 KDRTTCVLFGDGAGAVILQASDEPGVLASALHADGS-HSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVE 242 (333)
T ss_dssp TCTTTTTTBCEEEEEEEEEEESSCSEEEEEEEECGG-GGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHH
T ss_pred ccccceeeeccccEEEEEEEcCCCCeEEEEEEEccC-CcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHH
Confidence 2 34679999999999986531111001111111 122222 210 12355688998888888999999988
Q ss_pred HHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHH
Q 012353 224 LCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQ 303 (465)
Q Consensus 224 ~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~ 303 (465)
++++. |++++|||+|++||++.++++.+.++| +++.++.+.
T Consensus 243 ~l~~~------gl~~~did~~~~Hq~~~~i~~~~~~~l------------------------gl~~~~~~~--------- 283 (333)
T 4dfe_A 243 ALEKA------NLSAEQIDWLIPHQANIRIMQSTCRKL------------------------GLPQERMIV--------- 283 (333)
T ss_dssp HHHHT------TCCGGGCSEEEECCSCHHHHHHHHHHT------------------------TCCGGGBCC---------
T ss_pred HHHHc------CCCHHHCCEEEEcCCCHHHHHHHHHHh------------------------CCCHHHhhh---------
Confidence 88876 799999999999999999999999988 788776542
Q ss_pred hhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEE
Q 012353 304 QLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL 370 (465)
Q Consensus 304 ~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~ 370 (465)
++ +++|||++||+|++|.+++++ +++++|++|+|++||+|++|++++++|
T Consensus 284 ~l----------------~~~GNt~sasi~~~L~~~~~~-g~~~~Gd~vll~~~G~G~t~~~~ll~~ 333 (333)
T 4dfe_A 284 TV----------------GEHGNTSAASIPLALDVAVRD-GRIKRGQNVLIEGVGGGFTWGASVIRY 333 (333)
T ss_dssp CH----------------HHHCBCGGGHHHHHHHHHHHT-TCSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred hH----------------HhcCchHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchhheeEEEEEEC
Confidence 23 799999999999999999998 789999999999999999999999987
No 13
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=100.00 E-value=2.5e-47 Score=381.98 Aligned_cols=301 Identities=19% Similarity=0.207 Sum_probs=239.5
Q ss_pred CCceeEEeEEEEecCCceechHHHHHhcCCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEE
Q 012353 1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRL 78 (465)
Q Consensus 1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~l 78 (465)
|+++++|.+++.|+|+++|+++++++..+.+.+|+ ++||.+|++ +.++| ..+|+++|++++|+++|+++++||.|
T Consensus 1 ~~~~~~I~~~g~~lP~~~v~n~~~~~~~~~~~~~i~~~~Gi~~R~~--a~~~e-~~~La~~Aa~~aL~~ag~~~~~Id~l 77 (321)
T 3il6_A 1 MKNYARISCTSRYVPENCVTNHQLSEMMDTSAAWIHSRTGISERRI--VTQEN-TSDLCHQVAKQLLEKSGKQASEIDFI 77 (321)
T ss_dssp -CCEEEEEEEEEECCSCEEEHHHHHHHTTSCHHHHHHHHSCSEEEC--CSSCC-HHHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred CCCcEEEEEEEEECCCcEEcHHHHHHHhCCChhhhhhhcCceEEEE--CCCCC-HHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 88999999999999999999999999999999988 378888874 46677 99999999999999999999999999
Q ss_pred EEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc-cCCC--
Q 012353 79 EVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGP-- 155 (465)
Q Consensus 79 i~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~-- 155 (465)
|++|+++++..|+++.+|++.||+ +++++++++++|+|++.||.+|..+|++|.. ++||||++|.++. .++.
T Consensus 78 i~~t~~~~~~~p~~a~~v~~~lGl---~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~--~~vLvvg~e~~s~~~~~~dr 152 (321)
T 3il6_A 78 LVATVTPDFNMPSVACQVQGAIGA---TEAFAFDISAACSGFVYALSMAEKLVLSGRY--QTGLVIGGETFSKMLDWTDR 152 (321)
T ss_dssp EEECSSCSCSSSCHHHHHHHHTTC---TTCEEEEECCGGGHHHHHHHHHHHHHHTSSC--CCEEEEEEECGGGGSCTTCT
T ss_pred EEEeCCCCcCCCcHHHHHHHHcCC---CCceEEEeCcccHHHHHHHHHHHHHHHCCCC--CEEEEEEEccccccCCcccc
Confidence 999999998899999999999997 4589999999999999999999999999965 9999999999843 3333
Q ss_pred -CCcccccceeeeeecCCCCcccccccccccccCcccccccCCCC------------CCcccCCchhHHHHHHHHHHHHH
Q 012353 156 -ARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLAS------------EYPVVDGKLSQTCYLMALDTCYK 222 (465)
Q Consensus 156 -~~~t~GdGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~~~~------------~~p~~dg~~s~~~y~~~~~~~~~ 222 (465)
...+|||||+|+||++++...+......+.......++.|..+. .|..++|+..++...+.++++++
T Consensus 153 ~~~~lfGDGA~A~vl~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~ 232 (321)
T 3il6_A 153 STAVLFGDGAAGVLIEAAETPHFLNEKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNIL 232 (321)
T ss_dssp TTGGGBCCEEEEEEEEEESSCCEEEEEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHHHHHHH
T ss_pred ccceeeccccEEEEEEEcCCCCEEEEEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHHHHHHH
Confidence 34679999999999987532111111122211111123332211 23345555433332333333332
Q ss_pred HHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHH
Q 012353 223 CLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVS 302 (465)
Q Consensus 223 ~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~ 302 (465)
++ +.++|||+|++||++.++++.+.++| +++.++.+.
T Consensus 233 ----~~-------l~~~did~~v~Hq~~~~i~~~~~~~l------------------------gl~~ek~~~-------- 269 (321)
T 3il6_A 233 ----SL-------VTDETVDYLLLHQANVRIIDKIARKT------------------------KISREKFLT-------- 269 (321)
T ss_dssp ----TT-------CCGGGCSEEEECCSCHHHHHHHHHHH------------------------TCCGGGBCC--------
T ss_pred ----HH-------cCcccCCEEEEcCCCHHHHHHHHHHc------------------------CcCHHHhhh--------
Confidence 22 22789999999999999999999988 888876542
Q ss_pred HhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCC--CEEEEEEeccchheeeeEEEE
Q 012353 303 QQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDG--KRVVLFSYGSGLTATMFSLKL 370 (465)
Q Consensus 303 ~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G--~rill~syGsG~~~~~~~~~~ 370 (465)
++ +++|||++||+|++|.+++++ +++++| ++|++++||+|++|+++++++
T Consensus 270 -~l----------------~~~GNt~sasi~~~L~~~~~~-g~~~~G~~d~vll~~fG~G~t~~~~~l~v 321 (321)
T 3il6_A 270 -NM----------------DKYGNTSAASIPILLDEAVEN-GTLILGSQQRVVLTGFGGGLTWGSLLLTL 321 (321)
T ss_dssp -CG----------------GGTCBCGGGHHHHHHHHHHHT-TSSCTTSCCEEEEEEEETTTEEEEEEEEC
T ss_pred -hH----------------hhcccHHHHHHHHHHHHHHHh-CCCCCCCCCEEEEEEEehhheeEEEEEEC
Confidence 34 899999999999999999998 889999 999999999999999999875
No 14
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=100.00 E-value=5.2e-47 Score=384.98 Aligned_cols=303 Identities=17% Similarity=0.160 Sum_probs=253.6
Q ss_pred CceeEEeEEEEecCCceechHHHHHhcCCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEE
Q 012353 2 AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLE 79 (465)
Q Consensus 2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li 79 (465)
+++++|.+++.|+|+.+++++++++..+.+++|+ ++||.+|+ ++.++|+..+|+++|++++|+++|++|++||.||
T Consensus 23 ~~~~~I~~~g~~~P~~~v~~~~l~~~~~~~~~~i~~~tGi~~R~--~a~~~~~~~~La~~Aa~~aL~~agl~~~dId~vi 100 (359)
T 3h78_A 23 QGNPILAGLGFSLPKRQVSNHDLVGRINTSDEFIVERTGVRTRY--HVEPEQAVSALMVPAARQAIEAAGLLPEDIDLLL 100 (359)
T ss_dssp -CCCEEEEEEEECCSEEEEHHHHTTTSSCCHHHHHHHHCCCEEE--ECCTTCCTHHHHHHHHHHHHHHTTCCGGGCCEEE
T ss_pred CCCcEEEEEEEECCCceEcHHHHHHHhCCCHHHHHHhcCceEEE--EcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEE
Confidence 3579999999999999999999999999999988 46888777 4478999999999999999999999999999999
Q ss_pred EEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc-cCCCC--
Q 012353 80 VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGPA-- 156 (465)
Q Consensus 80 ~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~~-- 156 (465)
++|+++++..|+++.+|++.||+ +++.+++++++|+|++.||.+|..+|++|.. ++||||++|.++. .++.+
T Consensus 101 ~~t~~~~~~~p~~a~~v~~~lGl---~~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~--~~vLvvg~e~~S~~~~~~d~~ 175 (359)
T 3h78_A 101 VNTLSPDHHDPSQACLIQPLLGL---RHIPVLDIRAQASGLLYGLQMARGQILAGLA--RHVLVVCGEVLSKRMDCSDRG 175 (359)
T ss_dssp EECSSCSSSBSCHHHHHHHHHTC---CSCCEEEEECGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEEECGGGCCCSTTT
T ss_pred EEeCCCCCCCCcHHHHHHHHcCC---CCCcEEEECCHhHHHHHHHHHHHHHHHCCCc--CEEEEEEEchhcccCCccccc
Confidence 99999988899999999999997 4788999999999999999999999999965 9999999999843 33333
Q ss_pred C---cccccceeeeeecCCCC--ccc---ccccccccccCcccccccC---------------CCCCCcccCCchhHHHH
Q 012353 157 R---PTGGAAAVVMLVGPDAP--VAF---ESKLRGSHMSHAYDFYKPN---------------LASEYPVVDGKLSQTCY 213 (465)
Q Consensus 157 ~---~t~GdGA~A~Ll~~~~~--~~~---~~~~~~~~~~~~~df~~p~---------------~~~~~p~~dg~~s~~~y 213 (465)
+ .+|||||+|+||++++. ..+ .....+.+.+ ....|. ....|..++|+.+++.+
T Consensus 176 ~~t~~lfGDGAaA~vl~~~~~~~~~i~~~~~~s~g~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~ 252 (359)
T 3h78_A 176 RNLSILLGDGAGAVVVSAGESLEDGLLDLRLGADGNYFD---LLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHA 252 (359)
T ss_dssp HHHHTTBCEEEEEEEEECCSCSSSEEEEEEEEECGGGGG---GEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHH
T ss_pred ccccceecceeEEEEEEecCCCCCceEEEEEEEccCccc---eEEeCCCCCccCCccccccccccCCceEeccHHHHHHH
Confidence 2 56999999999998753 111 1111122211 111121 11224557888888888
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccc
Q 012353 214 LMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESY 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 293 (465)
.+.+++++++++++. |++++|||+|++||++.+|++.+.++| +++.++.+
T Consensus 253 ~~~~~~~i~~~L~~~------gl~~~did~~v~Hq~n~~i~~~~~~~l------------------------gl~~ek~~ 302 (359)
T 3h78_A 253 SQTLVRIAGEMLAAH------ELTLDDIDHVICHQPNLRILDAVQEQL------------------------GIPQHKFA 302 (359)
T ss_dssp HHHHHHHHHHHHHHT------TCCGGGCSEEEECCSCHHHHHHHHHHH------------------------TCCGGGBC
T ss_pred HHHHHHHHHHHHHHc------CCCHHHCCEEEECCCCHHHHHHHHHHh------------------------CcCHHHhh
Confidence 899999999998886 799999999999999999999999998 88877655
Q ss_pred cchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEeC
Q 012353 294 QSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 294 ~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~~ 372 (465)
. ++ +++|||++||+|++|.+++++ +++|++|+|++||+|++|++++++|.+
T Consensus 303 ~---------~l----------------~~~GNt~sAsi~l~L~~~~~~---l~~Gd~vll~~fG~G~t~~~~ll~~~~ 353 (359)
T 3h78_A 303 V---------TV----------------DRLGNMASASTPVTLAMFWPD---IQPGQRVLVLTYGSGATWGAALYRKPE 353 (359)
T ss_dssp C---------CH----------------HHHCBCGGGHHHHHHHHHGGG---SCTTCEEEEEEEETTTEEEEEEEECC-
T ss_pred h---------hh----------------hcccchHHHHHHHHHHHHHHh---CCCCCEEEEEEEchhhhheeeeEEehh
Confidence 2 34 799999999999999999986 689999999999999999999999965
No 15
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=100.00 E-value=1.4e-46 Score=380.11 Aligned_cols=304 Identities=18% Similarity=0.180 Sum_probs=248.9
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc-------CCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcC
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD-------GASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPK 73 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~-------g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~ 73 (465)
++|+|.+++.|+|+.+|+++|+++.. +.+++|+ .+||.+|++ ++++|++.+|+++|++++|+++|++++
T Consensus 11 ~~v~I~~~g~~lP~~~v~n~~l~~~~~~~~~~~~~~~~~i~~~tGi~~R~~--~~~~~~~~~La~~Aa~~al~~ag~~~~ 88 (345)
T 3s21_A 11 QNVSIAGLAHIDAPHTLTSKEINERLQPTYDRLGIKTDVLGDVAGIHARRL--WDQDVQASDAATQAARKALIDANIGIE 88 (345)
T ss_dssp SSEEEEEEEEEECSEEEEHHHHHHHHHHHHHHHTCCCCHHHHTTCCSEEEE--CSSCCCHHHHHHHHHHHHHHHHTCCGG
T ss_pred cceEEEEEEEeCCCcEEcHHHHHHHHhhcccccCCCHHHHHHhhCceeEEE--CCCCCCHHHHHHHHHHHHHHHcCCCHH
Confidence 56999999999999999999998864 6778888 478888774 478999999999999999999999999
Q ss_pred CccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc--
Q 012353 74 QIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-- 151 (465)
Q Consensus 74 ~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-- 151 (465)
+||.||++|+++++..|+++.+|++.||+ .+++.+++++++|+|++.||.+|..+|++|.. ++||||++|..+.
T Consensus 89 ~Id~vi~~t~~~~~~~p~~a~~v~~~lGl--~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~--~~vLvvg~e~~s~~~ 164 (345)
T 3s21_A 89 KIGLLINTSVSRDYLEPSTASIVSGNLGV--SDHCMTFDVANACLAFINGMDIAARMLERGEI--DYALVVDGETANLVY 164 (345)
T ss_dssp GCCEEEECCSCCSCSSSCHHHHHHHHHTC--CTTCEEEECCCGGGHHHHHHHHHHHHHHHTSC--SEEEEEEEECCHHHH
T ss_pred HCCEEEEEeCCCCCCCChHHHHHHHHhCC--CCCceEEeECCcCHHHHHHHHHHHHHHHCCCC--CEEEEEEEcccchhh
Confidence 99999999999998899999999999998 55799999999999999999999999999965 9999999999832
Q ss_pred --c------CC-C--------CCcccccceeeeeecCCCCcccccccccccc---cCcccccccCCCCCCcccCCchhHH
Q 012353 152 --A------EG-P--------ARPTGGAAAVVMLVGPDAPVAFESKLRGSHM---SHAYDFYKPNLASEYPVVDGKLSQT 211 (465)
Q Consensus 152 --~------~~-~--------~~~t~GdGA~A~Ll~~~~~~~~~~~~~~~~~---~~~~df~~p~~~~~~p~~dg~~s~~ 211 (465)
. +. + ...+|||||+|+||++++...-...+.++.+ .+..+++++.. .+..++|+..++
T Consensus 165 ~~~~~~~~~~~~~~~~f~~~~~~~~~GdGA~A~vl~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~g~~v~~ 242 (345)
T 3s21_A 165 EKTLERMTSPDVTEEEFRNELAALTLGCGAAAMVMARSELVPDAPRYKGGVTRSATEWNKLCRGNL--DRMVTDTRLLLI 242 (345)
T ss_dssp HHHHHHHTCTTCCHHHHHHHHGGGGBCCEEEEEEEEEGGGSTTSCEEEEEEEEECGGGTTC-------------CHHHHH
T ss_pred ccccccccCCccchhhhhhhccceeeccceeEEEEecCCCCCCCcceeeeccccCcchhhhccccC--cceEEcHHHHHH
Confidence 1 11 1 1357999999999998653100011122211 12234455432 234678998888
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCc
Q 012353 212 CYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDE 291 (465)
Q Consensus 212 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 291 (465)
.+.+.+.+++++++++. |++++|||+|++||++.++++++.++| +++.++
T Consensus 243 ~~~~~~~~~i~~~l~~~------gl~~~did~~v~Hq~~~~i~~~~~~~l------------------------gl~~ek 292 (345)
T 3s21_A 243 EGIKLAQKTFVAAKQVL------GWAVEELDQFVIHQVSRPHTAAFVKSF------------------------GIDPAK 292 (345)
T ss_dssp HHHHHHHHHHHHHHHHH------CCCGGGCSEEEECCSCHHHHHHHHHHH------------------------TCCGGG
T ss_pred HHHHHHHHHHHHHHHHc------CCCHHHCCEEEeCCCCHHHHHHHHHHc------------------------CcCHHH
Confidence 88888999999888876 799999999999999999999999988 788776
Q ss_pred cccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEE
Q 012353 292 SYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL 370 (465)
Q Consensus 292 ~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~ 370 (465)
.+. ++ +++|||++||+|++|.+++++ +++++|++|+|++||+|++|++++++|
T Consensus 293 ~~~---------~l----------------~~~GNt~sasi~~~L~~~~~~-g~~~~Gd~vll~~~G~G~t~~~~~l~w 345 (345)
T 3s21_A 293 VMT---------IF----------------GEHGNIGPASVPIVLSKLKEL-GRLKKGDRIALLGIGSGLNCSMAEVVW 345 (345)
T ss_dssp BCC---------CH----------------HHHCBCGGGHHHHHHHHHHHH-TCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred cee---------eH----------------hhcCchHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEChhhhheEEEEEC
Confidence 542 34 799999999999999999998 889999999999999999999999987
No 16
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.1e-43 Score=364.22 Aligned_cols=308 Identities=15% Similarity=0.104 Sum_probs=240.0
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc------------------------CCChhhh--hhhhcCeEEecCCC-------
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD------------------------GASKGKY--TIGLGQECMAFCSE------- 49 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~------------------------g~~~~k~--~~Gig~r~~av~~~------- 49 (465)
+++.|.++|.|+|+++|+|+|+++.. +.+.+|+ ++||.+|+++.+..
T Consensus 23 ~~~~I~gig~~~P~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~I~~~tGI~~R~~a~~~~~~~~~~~ 102 (392)
T 3led_A 23 RPAVIAATGLYTPPDSVSNAELVEAFNTYVANFNAANKARIEAGEIEPLQPSSSEFIEKASGIKSRYVVAKPGIVDPDVM 102 (392)
T ss_dssp CCEEEEEEEEECCSEEEEHHHHHHHHHHHHHHHHHHTHHHHHTTSSCCCCCCCHHHHHHHHCCCEEEESCCGGGGCTTTC
T ss_pred CceEEEEEEEeCCCceEcHHHHHHHHhhhhcccccccchhhhcccccccCCCcHHHHHHccCCceEEEecCccccccccc
Confidence 56999999999999999999998642 3456777 58999999764321
Q ss_pred --------C---CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcCh
Q 012353 50 --------V---EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACY 118 (465)
Q Consensus 50 --------~---Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~ 118 (465)
+ +.+.+|+++|++++|+++|++|++||.||++|+++++..|+++..|+..||+ ++.++|++++|+
T Consensus 103 ~~~~~~r~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl----~~~~~dv~~aC~ 178 (392)
T 3led_A 103 RPIIPERSNDELSILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGL----GGFAFDMNVACS 178 (392)
T ss_dssp SCCCCCCCTTSCCHHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTC----CSEEEEEECGGG
T ss_pred ccccccchhcccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCC----CCeEEEECCccH
Confidence 1 1368999999999999999999999999999999998899999999999996 378999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc-cCC---CCCcccccceeeeeecCCCC----cccccccccccccC-c
Q 012353 119 GGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEG---PARPTGGAAAVVMLVGPDAP----VAFESKLRGSHMSH-A 189 (465)
Q Consensus 119 gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~---~~~~t~GdGA~A~Ll~~~~~----~~~~~~~~~~~~~~-~ 189 (465)
|++.||.+|..+|++|.. ++||||++|.++. .++ ....+|||||+|+||++++. ..+......+...+ .
T Consensus 179 g~~~aL~~A~~~i~~g~~--~~vLvvg~E~~S~~~d~~dr~t~~lFGDGA~A~vl~~~~~~~~~~~i~~~~~~s~~~~~~ 256 (392)
T 3led_A 179 SATFGLKTAADFVGGGSV--DAVLMVNPEICSGHLNFRDRDSHFIFGDVATAAIVERADDAQGGWSILGTKLKTQFSNNI 256 (392)
T ss_dssp HHHHHHHHHHHHHHTTSC--SEEEEEEEEEGGGGCCTTCTTTTTTBCEEEEEEEEEEGGGCCSSEEEEEEEEEECCCSSE
T ss_pred HHHHHHHHHHHHHHCCCC--CEEEEEeehhcCCcCCcCcccCCcccccccEEEEEEecCCCCCCCeEEEEEEEEcccccc
Confidence 999999999999999965 9999999999842 232 33578999999999987642 11211111111111 0
Q ss_pred ---cccccc---C---CCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHH
Q 012353 190 ---YDFYKP---N---LASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFAR 260 (465)
Q Consensus 190 ---~df~~p---~---~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~ 260 (465)
..+..+ . ....+..++|+..++...+.+++++++++++. |++++|||+|++||+|.+|++.+.++
T Consensus 257 ~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~------gl~~~dId~~v~Hqan~~i~~~~~~~ 330 (392)
T 3led_A 257 RNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSEMIIEHAREI------GIDPHGLKRMWLHQANINMNEIIGRK 330 (392)
T ss_dssp EBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHHHHHHHHHHT------TCCGGGCSEEEECSSCHHHHHHHHHH
T ss_pred ccCCCcccCCCccccccccceEEechHHHHHHHHHHHHHHHHHHHHHc------CCCHHHCcEEEEcCCCHHHHHHHHHH
Confidence 000011 0 00123456788777777788888888888776 79999999999999999999999988
Q ss_pred hhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHH
Q 012353 261 LLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLI 340 (465)
Q Consensus 261 L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll 340 (465)
|+- + +++.++.+ .++ +++|||++||+|++|..+
T Consensus 331 llg-----------------l----~~~~~k~~---------~~l----------------~~~GNtssAsipl~L~~~- 363 (392)
T 3led_A 331 VLG-----------------R----DPTRDENV---------IIL----------------DDYANTSSAGSIIAFHKH- 363 (392)
T ss_dssp HHT-----------------S----CCCTTTBC---------CCH----------------HHHCBCGGGHHHHHHHHC-
T ss_pred hcC-----------------C----CCCHHHHH---------HHH----------------hhhCccHHHHHHHHHHHH-
Confidence 520 0 23444433 234 899999999999999986
Q ss_pred HhcCCCCCCCEEEEEEeccchheeeeEEEEe
Q 012353 341 HNKHSELDGKRVVLFSYGSGLTATMFSLKLS 371 (465)
Q Consensus 341 ~~~~~~~~G~rill~syGsG~~~~~~~~~~~ 371 (465)
. +++++|++|+|++||+|++|++++++|.
T Consensus 364 -~-~~~~~Gd~vll~gfG~G~t~~~~ll~~~ 392 (392)
T 3led_A 364 -Q-DDMAQGDLGLICSFGAGYSAGTVFVQKR 392 (392)
T ss_dssp -C-TTCCTTCEEEEEEEETTTEEEEEEEEEC
T ss_pred -h-CCCCCCCEEEEEEEChhhEeEEEEEEEC
Confidence 3 5788999999999999999999999984
No 17
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=100.00 E-value=9.8e-44 Score=360.73 Aligned_cols=304 Identities=16% Similarity=0.146 Sum_probs=234.6
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcCCChhhhhhhhcCeEEecCCCCC--CHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVE--DVISMSLTAVTNLLEKYKIDPKQIGRLEV 80 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~E--d~~~la~~Aa~~aL~~agi~~~~Id~li~ 80 (465)
++|+|.+++.|+|+.+++++++++....+..+-++||.+|+ +++++| ++.+|+++|++++|+++|++|++||.||+
T Consensus 4 ~~v~I~g~g~ylP~~~~~~~~~~~~~~~~~~~~~tGi~~r~--~a~~~e~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~ 81 (357)
T 3s3l_A 4 ENLFVSGVAAWLPPLSTAQDAVMAGLLDPARSKLRGIESVT--VASDAEEDAPPRMAARAARAALGRGDVDPADVSLVLH 81 (357)
T ss_dssp SSCEEEEEEEECCCEEEHHHHHHTTSSCHHHHHHHCCCEEE--CCCSSGGGSHHHHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred CceEEEEEEEECCCCCCHHHHHHhcCCcHHHHHHcCceEEE--ecCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 56999999999999888888776543222222247888877 446677 99999999999999999999999999999
Q ss_pred Eeec---CCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCC--EEEEEEecccc--c-c
Q 012353 81 GSET---VIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGR--YGLVVCTDSAV--Y-A 152 (465)
Q Consensus 81 ~T~s---~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~--~aLVVasD~~~--y-~ 152 (465)
+|++ ++. ++.+.+|+.+||+ +++.++|++++|+|++.||.+|..+|++|.+ + +||||++|.++ + .
T Consensus 82 ~t~~~~~~d~--~~~a~~v~~~lG~---~~~~~~~v~~aC~~~~~al~~A~~~i~sg~~--~~~~vLvvg~e~~s~~~~~ 154 (357)
T 3s3l_A 82 SSLWFQGIDL--WPAASYVAHEAVG---RHVPAFGLAQRCNGGMGAIELAGAYLGSGIG--AGHAALLTTGDRFAGPRID 154 (357)
T ss_dssp ECSSCCSSSS--SCHHHHHHHHHTC---SSSCEEEEECGGGHHHHHHHHHHHHHHTTSS--SSSEEEEEEEECCCTTTCC
T ss_pred EeccCCCccc--ccHHHHHHHHhCC---CCCcEEEEcCccHHHHHHHHHHHHHHHcCCC--CCCEEEEEEEecccccccc
Confidence 9984 433 3679999999997 5789999999999999999999999999966 7 99999999986 2 2
Q ss_pred CCC--CCcccccceeeeeecCCCCc-ccccccccccccCcccccccCCC--------CCCcccCCchhHH----------
Q 012353 153 EGP--ARPTGGAAAVVMLVGPDAPV-AFESKLRGSHMSHAYDFYKPNLA--------SEYPVVDGKLSQT---------- 211 (465)
Q Consensus 153 ~~~--~~~t~GdGA~A~Ll~~~~~~-~~~~~~~~~~~~~~~df~~p~~~--------~~~p~~dg~~s~~---------- 211 (465)
++. ...+|||||+|+||++++.. .+......+... ..+++++... ..+..++|+..+.
T Consensus 155 ~~~~~~~~lfGDGA~A~vl~~~~~~~~i~~~~~~s~g~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~ 233 (357)
T 3s3l_A 155 RWNSVDVTMYGDGAAALVLSTRDGFARVLSTATGVDNS-LEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPDLT 233 (357)
T ss_dssp TTTSSSSCCBCCEEEEEEEESSCCSEEEEEEEEEECGG-GGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTTHH
T ss_pred cccccCCcccccccEEEEEecCCCCCeEEEEEEEEccC-hhhhcccCCCCCCCccCcCCccccccchhhhhcccchhhhH
Confidence 332 35789999999999987641 111111112221 1234432210 0112234442222
Q ss_pred -HHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeec-cCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCC
Q 012353 212 -CYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVF-HSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSG 289 (465)
Q Consensus 212 -~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~-H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 289 (465)
.+.+.+.+++++++++. |++++|||+|++ ||++.+ ++.+.++| +++.
T Consensus 234 ~~~~~~~~~~i~~~L~~~------gl~~~did~~v~~hq~~~~-~~~~~~~l------------------------gl~~ 282 (357)
T 3s3l_A 234 HRYIDLLVAAKTQALEDA------GTAIEDIAHAVIPVSRRGT-GHELHDLL------------------------GLPD 282 (357)
T ss_dssp HHHHHHHHHHHHHHHHHT------TCCGGGCSEEECCSCCCCS-SCCHHHHH------------------------TSCG
T ss_pred HHHHHHHHHHHHHHHHHc------CCCHHHCCEEEecCcChHH-HHHHHHHc------------------------CCCH
Confidence 45567777777777776 799999999996 999998 88888888 8888
Q ss_pred CccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEE
Q 012353 290 DESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLK 369 (465)
Q Consensus 290 ~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~ 369 (465)
++.+. ++ .+++|||++||+|++|.+++++ +++++|++|+|++||+|++|++++++
T Consensus 283 ek~~~---------~~---------------~~~~GNt~aAsipl~L~~~~~~-g~l~~Gd~vll~~fG~G~t~~a~ll~ 337 (357)
T 3s3l_A 283 ERTSW---------AY---------------GRTTGHVGAGDQYAGLAHLVEN-ALVQPGDRVLLFGGGAGYTCTAAVVE 337 (357)
T ss_dssp GGBTH---------HH---------------HHHHCBCTTCHHHHHHHHHHHT-TCCCTTCEEEEECCBTTTEEEEEEEE
T ss_pred HHhHH---------Hh---------------ccccccchHhHHHHHHHHHHHc-CCCCCCCEEEEEEEchhhhheeeeEE
Confidence 76542 22 2689999999999999999998 88999999999999999999999999
Q ss_pred EeC
Q 012353 370 LSE 372 (465)
Q Consensus 370 ~~~ 372 (465)
|.+
T Consensus 338 ~~~ 340 (357)
T 3s3l_A 338 ILR 340 (357)
T ss_dssp ECC
T ss_pred ecc
Confidence 975
No 18
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5e-43 Score=352.09 Aligned_cols=306 Identities=18% Similarity=0.181 Sum_probs=248.7
Q ss_pred CCceeEEeEEEEecCCceechHHHHHhcCCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEE
Q 012353 1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRL 78 (465)
Q Consensus 1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~l 78 (465)
|+|+++|.++++|+|+.+++++++++..+.+.+|+ .+||.+|+++ .+ ++..+|+++|++++|+++|+ ++||.|
T Consensus 2 ~~m~~~I~g~g~~~P~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~--~~-~~~~~la~~Aa~~al~~ag~--~~id~v 76 (331)
T 2x3e_A 2 MPRAAVVCGLGSYLPEAVLSNDMLAAELDTSDAWISSRTGVRQRHIA--GD-LGSGDLALRAASAALASAGL--ERVDAV 76 (331)
T ss_dssp --CEEEEEEEEEECCSCEEEHHHHHHHTTCCHHHHHHHHCCCEEECC--TT-CCHHHHHHHHHHHHHHHHTC--SCCSEE
T ss_pred CCceeEEEEEEEECCCcEecHHHHHHHhCCCHHHHHHhhCceEEEec--CC-CCHHHHHHHHHHHHHHhCCc--ccCCEE
Confidence 45789999999999999999999999999888888 4788888754 33 89999999999999999999 899999
Q ss_pred EEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc-cCCCC-
Q 012353 79 EVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGPA- 156 (465)
Q Consensus 79 i~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~~- 156 (465)
+++|+++++..|+++.+|+..||+ +++++++++++|+|++.||..|..+|++|.. ++|||+++|..+. .++.+
T Consensus 77 i~~t~~~~~~~p~~a~~v~~~lgl---~~~~~~~v~~aCas~~~Al~~A~~~i~~g~~--~~vLv~g~e~~s~~~~~~d~ 151 (331)
T 2x3e_A 77 VLATSTGDFCCPATAPRVAARLGL---VGALAFDLSAAATGFVYGLASVGSLISAGLA--DSALLVGVDTFSHTLDPADR 151 (331)
T ss_dssp EEECSSCSEEESCSHHHHHHHTTC---TTSEEEEEECGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECGGGGSCTTCH
T ss_pred EEEeCCCCCCCChHHHHHHHHhCC---CCCcEEEEcCcChHHHHHHHHHHHHHHcCCC--CEEEEEEeeccccCCCcccc
Confidence 999999988789999999999997 3489999999999999999999999999966 9999999998742 23322
Q ss_pred --CcccccceeeeeecCCC--C-cccccccccccccCcccccccCCC---------CCCcccCCchhHHHHHHHHHHHHH
Q 012353 157 --RPTGGAAAVVMLVGPDA--P-VAFESKLRGSHMSHAYDFYKPNLA---------SEYPVVDGKLSQTCYLMALDTCYK 222 (465)
Q Consensus 157 --~~t~GdGA~A~Ll~~~~--~-~~~~~~~~~~~~~~~~df~~p~~~---------~~~p~~dg~~s~~~y~~~~~~~~~ 222 (465)
..+|||||+|+||++.+ . ..+......++......++.|.++ ..|..++|+..++.+.+.+.++++
T Consensus 152 ~~~~~~GdGA~A~vL~~~~~a~~~~i~~~~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~ 231 (331)
T 2x3e_A 152 STRALFGDGAGAVVLRAGDAEEEGALLAFDLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVR 231 (331)
T ss_dssp HHHHHBCCEEEEEEEEEECTTSTTBEEEEEEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHH
T ss_pred ccceeeccccEEEEEEecCCCCCCceEEEEEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHH
Confidence 35799999999998754 2 111100111111111112334322 124567888888877888888888
Q ss_pred HHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHH
Q 012353 223 CLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVS 302 (465)
Q Consensus 223 ~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~ 302 (465)
+++++. |++++|||+|++|+++.++.+++.++| +++.++.+.
T Consensus 232 ~aL~~a------gl~~~did~~~~H~~~~~~~d~~~~~l------------------------g~~~~~~~~-------- 273 (331)
T 2x3e_A 232 RVLDRV------GWQASDLHHLVPHQANTRILAAVADQL------------------------DLPVERVVS-------- 273 (331)
T ss_dssp HHHHHH------TCCGGGCSEEEECCCCHHHHHHHHHHH------------------------TCCGGGBCC--------
T ss_pred HHHHHc------CCCHHHCCEEEEcCCCHHHHHHHHHHc------------------------CCCHHHHhh--------
Confidence 888876 799999999999999999999988887 666554331
Q ss_pred HhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEeC
Q 012353 303 QQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 303 ~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~~ 372 (465)
++ .++||+++||++++|..++++ +++++|++|++++||+|+++++++++|.+
T Consensus 274 -~~----------------~~~Gnt~sAs~~~~L~~~~~~-~~~~~G~~vll~~~G~G~~~~~~~l~~~~ 325 (331)
T 2x3e_A 274 -NI----------------AEVGNTVAASIPLALAHGLRQ-GILRDGGNMVLTGFGAGLTWGSVALRWPK 325 (331)
T ss_dssp -CH----------------HHHCBCGGGHHHHHHHHHHHT-TCSCTTCEEEEEEEETTTEEEEEEEECCC
T ss_pred -hH----------------hhhCcHHHHHHHHHHHHHHHh-CCCCCCCEEEEEEEeHHhhheeeEEEECC
Confidence 22 699999999999999999998 78899999999999999999999999965
No 19
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=100.00 E-value=3.4e-42 Score=343.71 Aligned_cols=305 Identities=20% Similarity=0.206 Sum_probs=248.0
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcCCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV 80 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 80 (465)
|+++|.++++|+|+.+++++++++..+.+++|+ ..||.+|++ +.++++..+|+++|++++|+++|+++++||.|++
T Consensus 1 ~~~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~~~~Gi~~r~~--~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~ 78 (317)
T 1hnj_A 1 MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHI--AAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVV 78 (317)
T ss_dssp CEEEEEEEEEECCSEEEEHHHHHTTSSCCHHHHHHHHCCCEEEE--CCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEE
T ss_pred CCcEEEEEEEeCCCceecHHHHHHHhCCCHHHHHHHhCceEEEe--cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 478999999999999999999999988888887 468888775 4789999999999999999999999999999999
Q ss_pred EeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc-cCCCC---
Q 012353 81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGPA--- 156 (465)
Q Consensus 81 ~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~~--- 156 (465)
+|+++.+..|+.+.+|+..||+ ++++++++.++|++++.||..|..+|++|.+ +.|||+++|.... .++.+
T Consensus 79 g~~~~~~~~~~~a~~v~~~lgl---~~~~~~~v~~aCas~~~al~~A~~~i~~g~~--~~vlv~g~e~~s~~~~~~d~~~ 153 (317)
T 1hnj_A 79 ATTSATHAFPSAACQIQSMLGI---KGCPAFDVAAACAGFTYALSVADQYVKSGAV--KYALVVGSDVLARTCDPTDRGT 153 (317)
T ss_dssp ECSCCSCSSSCHHHHHHHHHTC---CSSCEEEECCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECHHHHSCTTCHHH
T ss_pred EcCCCCCCCCcHHHHHHHHhCC---CCCeEEeeCcccHHHHHHHHHHHHHHHCCCC--CEEEEEEechhcccCCchhccc
Confidence 9999988889999999999997 3478999999999999999999999999966 9999999998632 22222
Q ss_pred CcccccceeeeeecCCCCcccccccccccccCcccccccCC------CCCCcccCCchhHHHHHHHHHHHHHHHHHHhhh
Q 012353 157 RPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNL------ASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEK 230 (465)
Q Consensus 157 ~~t~GdGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~~------~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~ 230 (465)
..+|||||+|+||++.+...+.....+++......++.|.+ ...|+.++|+..++.+.+.+.+++++++++.
T Consensus 154 ~~~~GdGA~A~vL~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~a-- 231 (317)
T 1hnj_A 154 IIIFGDGAGAAVLAASEEPGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAAN-- 231 (317)
T ss_dssp HTTBCCEEEEEEEEEESSCSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred ceeeccccEEEEEEecCCCceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHc--
Confidence 35799999999998764211110011222211111233331 1234557888887888888888888888776
Q ss_pred hhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhh
Q 012353 231 LEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLY 310 (465)
Q Consensus 231 ~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~ 310 (465)
|++++|||+|++|+++.++.+.+.+.| +++.++.+. +.
T Consensus 232 ----gl~~~did~v~~H~~~~~~~d~i~~~l------------------------g~~~~~~~~---------~~----- 269 (317)
T 1hnj_A 232 ----NLDRSQLDWLVPHQANLRIISATAKKL------------------------GMSMDNVVV---------TL----- 269 (317)
T ss_dssp ----TCCGGGCCEEEECCSCHHHHHHHHHHT------------------------TCCGGGBCC---------CH-----
T ss_pred ----CCCHHHCCEEEEcCCCHHHHHHHHHHc------------------------CCCHHHhHh---------hH-----
Confidence 799999999999999999999887776 565544321 12
Q ss_pred hhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEE
Q 012353 311 DAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL 370 (465)
Q Consensus 311 ~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~ 370 (465)
.++||+++||++++|..++++ +++++|++|++++||+|++|++++++|
T Consensus 270 -----------~~~Gn~~~As~~~~L~~~~~~-~~~~~G~~vll~~~G~G~t~~~~~l~~ 317 (317)
T 1hnj_A 270 -----------DRHGNTSAASVPCALDEAVRD-GRIKPGQLVLLEAFGGGFTWGSALVRF 317 (317)
T ss_dssp -----------HHHCBCGGGHHHHHHHHHHHT-TCSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred -----------hhhCcHHHHHHHHHHHHHHHh-CCCCCCCEEEEEEEchhheeEEEEEEC
Confidence 689999999999999999998 788999999999999999999999986
No 20
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=100.00 E-value=1.2e-41 Score=343.05 Aligned_cols=306 Identities=19% Similarity=0.213 Sum_probs=249.4
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcCCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV 80 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 80 (465)
++++|.++++|+|+.+++++++++..+.+++|+ ..||.+|+ ++.++++..+|+++|++++|+++|+++++||.|++
T Consensus 10 ~~~~I~gig~~~P~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~--~~~~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~ 87 (339)
T 1mzj_A 10 RFSRVLGVGSYRPRREVSNKEVCTWIDSTEEWIETRTGIRSRR--IAEPDETIQVMGVAASRRALEHAGVDPAEIDLVVV 87 (339)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHTTTSSCCHHHHHHHHCCSEEE--CCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEE
T ss_pred CceEEEEEEEeCCCccccHHHHHHHhCCCHHHHHHhcCceEEE--EeCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 469999999999999999999999988888887 46888877 44678999999999999999999999999999999
Q ss_pred EeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc-cCC---CC
Q 012353 81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEG---PA 156 (465)
Q Consensus 81 ~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~---~~ 156 (465)
+|+++++..|+++.+|+..||+ ++++++++.++|+|++.||..|..+|++|.. +.|||+++|..+. .++ ..
T Consensus 88 gt~~~~~~~p~~a~~v~~~lgl---~~~~~~~v~~aCas~~~Al~~A~~~i~~G~~--~~vLv~g~e~~s~~~~~~d~~~ 162 (339)
T 1mzj_A 88 STMTNFVHTPPLSVAIAHELGA---DNAGGFDLSAACAGFCHALSIAADAVESGGS--RHVLVVATERMTDVIDLADRSL 162 (339)
T ss_dssp ECSCCCCCSSCHHHHHHHHHTC---TTCEEEEEECGGGHHHHHHHHHHHHHHHSSC--SCEEEEEEEEGGGGSCSSCTTT
T ss_pred EecCCCCCCChHHHHHHHHhCC---CCccEEEccccchHHHHHHHHHHHHHHCCCC--CEEEEEEEcccccccCcccccc
Confidence 9999988889999999999997 3479999999999999999999999999966 9999999998742 122 23
Q ss_pred CcccccceeeeeecCCCCcccccccccccccCcccccc-----cCC------CCCCcccCCchhHHHHHHHHHHHHHHHH
Q 012353 157 RPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYK-----PNL------ASEYPVVDGKLSQTCYLMALDTCYKCLC 225 (465)
Q Consensus 157 ~~t~GdGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df~~-----p~~------~~~~p~~dg~~s~~~y~~~~~~~~~~~~ 225 (465)
..+|||||+|+||++.+...+......++.. ..|.+. |.. ...|..++|+.+++.+.+.+.+++++++
T Consensus 163 ~~~~GdGA~A~vL~~~~~~~i~~~~~~~~g~-~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL 241 (339)
T 1mzj_A 163 SFLFGDGAGAAVVGPSDVPGIGPVVRGIDGT-GLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREAL 241 (339)
T ss_dssp TTTBCEEEEEEEEEEESSCCBCCCEEEECGG-GGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEeccCceEEEEEecCCCCeEEEEEEEcCC-CCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999876421111000111111 112111 211 1234567888888877788888888887
Q ss_pred HHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCC-ccccchhHHHHHHh
Q 012353 226 SKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGD-ESYQSRDLEKVSQQ 304 (465)
Q Consensus 226 ~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~d~~~~k~~~~ 304 (465)
++. |++++|||+|++|+++.++.+.+.+.| +++.+ +.+. +
T Consensus 242 ~~a------gl~~~did~v~~H~~~~~~~d~i~~~l------------------------g~~~~~~~~~---------~ 282 (339)
T 1mzj_A 242 EVA------GLTVGDLVAFVPHQANLRIIDVLVDRL------------------------GVPEHVVVSR---------D 282 (339)
T ss_dssp HTT------TCCGGGCSEEEECCSCHHHHHHHHHHH------------------------TCCTTSEECC---------T
T ss_pred HHc------CCCHHHCCEEEECCCCHHHHHHHHHHh------------------------CCCccceeee---------h
Confidence 765 799999999999999999999988877 66665 4331 2
Q ss_pred hhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEeC
Q 012353 305 LAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 305 ~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~~ 372 (465)
+ .++||+++||++++|..++++ +++++|++|++++||+|+++++++++|.+
T Consensus 283 ~----------------~~~Gn~~sAs~~~~L~~~~~~-g~~~~G~~vll~~~G~G~t~~~~~l~~~~ 333 (339)
T 1mzj_A 283 A----------------EDTGNTSSASVALALDRLVRS-GAVPGGGPALMIGFGAGLSYAGQALLLPD 333 (339)
T ss_dssp H----------------HHHCBCTTHHHHHHHHHHHHH-TSSCTTCEEEEEEEETTTEEEEEEEECCC
T ss_pred h----------------hhcCchHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchhheeEEEEEEeCC
Confidence 2 689999999999999999998 78899999999999999999999999964
No 21
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=100.00 E-value=8.1e-42 Score=349.21 Aligned_cols=315 Identities=16% Similarity=0.181 Sum_probs=239.8
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc----CCChh-----hh--hhhhcCeEEecCCCC-------------------CC
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD----GASKG-----KY--TIGLGQECMAFCSEV-------------------ED 52 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~----g~~~~-----k~--~~Gig~r~~av~~~~-------------------Ed 52 (465)
++|.|.+++.|+|++.|+|+++++.. ..++. ++ ++||.+|+++..+.. ++
T Consensus 1 ~~v~I~~ig~~~P~~~v~~~e~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~s~~~r~~~~~~~ 80 (379)
T 3euo_A 1 LGLSITGLGVQYPPYSLGPDAIDILSKRYHPESPAMKKVLAINRYTGIDQRSSIGNPDHPLVNKPNPPTVKELHEVFMSD 80 (379)
T ss_dssp CCCEEEEEEEECCSEEECTHHHHHHHHHHCCCCHHHHHHHHHTTSSCCCCEEESSCTTCGGGSSSSCCCHHHHHHHHHHH
T ss_pred CceEEEEEEeeCCCceeCHHHHHHHHHHhcccchhHHHHHHHHHhCCcceeeeeecCcCcccccccCCCHHHHHHHHHHH
Confidence 46899999999999999999996643 23332 23 489999998643211 35
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEee-cCcChhHHHHHHHHHHHH
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS-TNACYGGTAALFNCVNWV 131 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di-~~aC~gg~~AL~~A~~~l 131 (465)
+.+|+++|+++||+++|+++++||+||++|++ .+..|+++.+|+++||+ .+.+.++|+ +++|+||+.||.+|..+|
T Consensus 81 ~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t-~~~~p~~a~~v~~~LGl--~~~~~~~~v~~~~C~~~~~al~~A~~~i 157 (379)
T 3euo_A 81 GVPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSANPGYDHYVAKELGL--SDRLEKVLLHGIGASGGLAALRTAANLC 157 (379)
T ss_dssp THHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCCSSCHHHHHHHHHTC--CTTCEEEEECSCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecC-CCCCCCHHHHHHHHcCC--CCCeeEEEeeCchhhHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999 66799999999999998 455568999 699999999999999999
Q ss_pred Hc----CCCCCCEEEEEEecccc-ccC---------CC---CCcccccceeeeeecCCCCcc-ccc---ccccccc---c
Q 012353 132 ES----SSWDGRYGLVVCTDSAV-YAE---------GP---ARPTGGAAAVVMLVGPDAPVA-FES---KLRGSHM---S 187 (465)
Q Consensus 132 ~s----g~~~~~~aLVVasD~~~-y~~---------~~---~~~t~GdGA~A~Ll~~~~~~~-~~~---~~~~~~~---~ 187 (465)
++ |.. ++||||++|..+ +.+ .. ...+|||||+|+||++++... .+. .+.++.+ .
T Consensus 158 ~a~~~~G~~--~~vLvv~~E~~s~~~~~~~~~~~~~~~d~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~~p 235 (379)
T 3euo_A 158 LGHTARGKP--ARILVLALEVSTTMVRSELESIDALQETRIGIALFSDCASAVILSNGIGEAPGKPAIYDLLGWENRVIP 235 (379)
T ss_dssp HHHHHTTCC--CEEEEEEEECCGGGHHHHHHHHHHHCCCCCHHHHBCCEEEEEEEECCTTCCTTCCCSEEEEEEEEEECT
T ss_pred HhccccCCC--CEEEEEEEEeehhhhcCccccccccHHHhhcceeecCccEEEEEecCCCCccccccceeeeceeEEEec
Confidence 98 855 999999999983 211 12 236799999999999874310 000 1111111 0
Q ss_pred Ccccc--cccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhh-hhcCCCCCCCCceeeccCCchHHHHHHHHHhhhh
Q 012353 188 HAYDF--YKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEK-LEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFN 264 (465)
Q Consensus 188 ~~~df--~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~-~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~ 264 (465)
+..+. |... ...+..++|+..++...+.++.++++++++... +..++++++|||++ +||++.+|++.+.++|
T Consensus 236 ~~~~~~~~~~~-~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~~l~~~gl~~~did~~-~Hq~n~~il~~v~~~L--- 310 (379)
T 3euo_A 236 DSEHDLGFDVD-PMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWA-MHPGGATILSGAESAM--- 310 (379)
T ss_dssp TCGGGEEEEEE-TTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSGGGSEEE-ECCSSHHHHHHHHHHH---
T ss_pred CchhhcCceec-CCCcEEEeChHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHeeEE-eCCCChHHHHHHHHHh---
Confidence 11110 1111 112345678877777778888888888877521 13357889999976 9999999999999998
Q ss_pred hhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcC
Q 012353 265 DFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKH 344 (465)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~ 344 (465)
|+++++...+ ...+ +++|||++||+|++|..++++ +
T Consensus 311 ---------------------gl~~ek~~~s------~~~l----------------~~~GNtssAsi~~~L~~~~~~-g 346 (379)
T 3euo_A 311 ---------------------GLTPEHMRAS------YDRY----------------INHGNSSSATIFSVLNRLREK-D 346 (379)
T ss_dssp ---------------------TCCGGGGHHH------HHHH----------------HHHCBCGGGHHHHHHHHHTSH-H
T ss_pred ---------------------CCCHHHHHHH------HHHH----------------HhcCccHHHHHHHHHHHHHhh-c
Confidence 8887765321 1122 799999999999999999986 5
Q ss_pred --CCCCC----CEEEEEEeccchheeeeEEEEe
Q 012353 345 --SELDG----KRVVLFSYGSGLTATMFSLKLS 371 (465)
Q Consensus 345 --~~~~G----~rill~syGsG~~~~~~~~~~~ 371 (465)
++++| ++|+|++||+|++|++++++|+
T Consensus 347 ~~~l~~Gg~~~d~vll~~fG~G~t~~~~ll~~~ 379 (379)
T 3euo_A 347 MDALAPGGKVKEYVVGCAFGPGINVEMCMLKRR 379 (379)
T ss_dssp HHTTCGGGCCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred ccccCCCCCCCCeEEEEEECcccEeEEEEEEeC
Confidence 56666 9999999999999999999984
No 22
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=100.00 E-value=2.1e-41 Score=347.70 Aligned_cols=307 Identities=16% Similarity=0.162 Sum_probs=235.7
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc---CCChh---------hh--hhhhcCeEEecCCCCC-----------------
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD---GASKG---------KY--TIGLGQECMAFCSEVE----------------- 51 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~---g~~~~---------k~--~~Gig~r~~av~~~~E----------------- 51 (465)
..++|.+|+.|+|+++|+|+|+++.. ..+.+ ++ ++||.+|+++. ++|
T Consensus 15 ~~~~I~~ig~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~--~~e~~~~~~~~~~~~~p~~~ 92 (393)
T 3ov2_A 15 GPATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMCEKTMVKKRYLHL--TEEILKERPKLCSYKEASFD 92 (393)
T ss_dssp SCCEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSC--CHHHHHHSGGGGSSSSCCHH
T ss_pred CCeEEEEEEeeCCCcccCHHHHHHHHHHhhcccchHHHHHHHHHHHHhcCCceEEeec--ChhhhccCcccccCCCCCHH
Confidence 45899999999999999999999874 22222 24 48999998653 333
Q ss_pred --------CHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCce-eEeecCcChhHHH
Q 012353 52 --------DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE-GVDSTNACYGGTA 122 (465)
Q Consensus 52 --------d~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~-~~di~~aC~gg~~ 122 (465)
+..+|+++|+++||+++|+++++||.||++|+++ +..|+++.+|+++||+ ...+. +++++++|+|++.
T Consensus 93 ~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~-~~~p~~a~~v~~~LGl--~~~~~~~~~v~~~C~g~~~ 169 (393)
T 3ov2_A 93 DRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISG-IDMPGADYRLATLLGL--PLTVNRLMIYSQACHMGAA 169 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CCBSCHHHHHHHHHTC--CTTSEEEEEESCCTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CCCCCHHHHHHHHcCC--CCCcceeeEEcCccHHHHH
Confidence 5899999999999999999999999999999999 7799999999999998 44443 8999999999999
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEEecccc--ccCCCC--------CcccccceeeeeecCCCCcccccccccccccCcccc
Q 012353 123 ALFNCVNWVESSSWDGRYGLVVCTDSAV--YAEGPA--------RPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDF 192 (465)
Q Consensus 123 AL~~A~~~l~sg~~~~~~aLVVasD~~~--y~~~~~--------~~t~GdGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df 192 (465)
||.+|..+|++|.. ++||||++|.++ +.++.+ ..+|||||+|+||++++...+.......... ...
T Consensus 170 al~~A~~~i~sg~~--~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~~~~~--~~~ 245 (393)
T 3ov2_A 170 MLRIAKDLAENNRG--ARVLVVACEITVLSFRGPNEGDFEALAGQAGFGDGAGAVVVGADPLEGIEKPIYEIAAA--MQE 245 (393)
T ss_dssp HHHHHHHHHHHSTT--CEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTCCCSEEEEEE--EEE
T ss_pred HHHHHHHHHHcCCC--CEEEEEEEeccchhccCCcccchhhhcccccccCccEEEEEEecCCCcccCceeEEEec--CcE
Confidence 99999999999965 999999999984 433322 2469999999999987532111000000000 001
Q ss_pred cccCCCCC----------CcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCC-CCCceeeccCCchHHHHHHHHHh
Q 012353 193 YKPNLASE----------YPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSL-SNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 193 ~~p~~~~~----------~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~did~~~~H~p~~km~~~~~~~L 261 (465)
..|..... +..+ ++..++...+.+.++++.++++. |++. +|+ +|++||+|.+|++.+.++|
T Consensus 246 ~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~------gl~~~~di-~~v~Hq~n~~i~~~v~~~L 317 (393)
T 3ov2_A 246 TVAESQGAVGGHLRAFGWTFYF-LNQLPAIIADNLGRSLERALAPL------GVREWNDV-FWVAHPGNWAIIDAIEAKL 317 (393)
T ss_dssp ECTTCTTSEEEEEETTEEEEEE-CTTHHHHHHTTSHHHHHHHHGGG------TCCSGGGS-EEEECCCCHHHHHHHHHHH
T ss_pred EecCCcccCceeeeCCceEEEE-CcHHHHHHHHHHHHHHHHHHHHc------CCCcccCc-EEEECCCChHHHHHHHHHc
Confidence 11211100 1112 24444555566777777777665 7886 888 9999999999999999999
Q ss_pred hhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHH
Q 012353 262 LFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIH 341 (465)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~ 341 (465)
|++.++.+.+ ..++ +++|||++||+|++|..+++
T Consensus 318 ------------------------gl~~ek~~~s------~~~l----------------~~~GNtssAsip~~L~~~~~ 351 (393)
T 3ov2_A 318 ------------------------QLSPDKLSTA------RHVF----------------TEYGNMQSATVYFVMDELRK 351 (393)
T ss_dssp ------------------------TCCTTTTHHH------HHHH----------------HHHCBCGGGHHHHHHHHHHH
T ss_pred ------------------------CCCHHHHHHH------HHHH----------------HHhCChHHhHHHHHHHHHHH
Confidence 8888875421 0124 89999999999999999987
Q ss_pred h---cCCCCCC---CEEEEEEeccchheeeeEEEEeC
Q 012353 342 N---KHSELDG---KRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 342 ~---~~~~~~G---~rill~syGsG~~~~~~~~~~~~ 372 (465)
+ .+++++| ++|+|++||+|++|+++++++.+
T Consensus 352 ~~~~~g~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~ 388 (393)
T 3ov2_A 352 RSAVEGRSTTGDGLQWGVLLGFGPGLSIETVVLRSMP 388 (393)
T ss_dssp HHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred hhhhcCCcCCCCCCCeEEEEEECccceeeeeeeEEcc
Confidence 4 2677889 99999999999999999999987
No 23
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=100.00 E-value=1.1e-40 Score=331.40 Aligned_cols=302 Identities=16% Similarity=0.190 Sum_probs=247.3
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcCCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV 80 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 80 (465)
|+++|.++++|+|+.+++++++++..+.+++|+ ..||.+|+++ .+ ++..+|+++|++++|+++|+++++||.|++
T Consensus 1 m~~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~~~~Gi~~r~~~--~~-~~~~~l~~~a~~~al~~ag~~~~~id~v~~ 77 (309)
T 2ebd_A 1 MGTKIIGTGVYLPKNVLTNFDLEKIVDTSDEWITTRTGIKERRIA--KE-ETITYMATQAAKEALREANLSPEELDLIIL 77 (309)
T ss_dssp CCEEEEEEEEECCSEEEEHHHHHTTSSCCHHHHHHHHCCCEEEEC--SS-CCHHHHHHHHHHHHHHHHTCCGGGCSEEEE
T ss_pred CceEEEEEEEECCCceEcHHHHHHHcCCCHHHHHHHhCceeeeec--CC-CCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 468999999999999999999999988888887 3788888865 33 899999999999999999999999999999
Q ss_pred EeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc-cC---CCC
Q 012353 81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AE---GPA 156 (465)
Q Consensus 81 ~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~---~~~ 156 (465)
+|.++++..|+.+.+|+..||+ +.++++++.++|++++.||..|..+|++|.. +.|||+++|.... .+ ...
T Consensus 78 ~~~~~~~~~~~~a~~v~~~lgl---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~vlv~g~e~~s~~~~~~~~~~ 152 (309)
T 2ebd_A 78 ATLTPQKRFPSTACLVQAQLKA---KGVYAFDISAACSGFIYALDIADSFIKSGKA--KNVLVIGAEKLSEAVDWEDRST 152 (309)
T ss_dssp ECSSCSSSSSCHHHHHHHHHTC---TTCEEEEEECGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEEEGGGTCCTTCTTT
T ss_pred EcCCCCCCCCcHHHHHHHHhCC---CCceEEecCccchHHHHHHHHHHHHHHCCCC--CEEEEEEecccccccCccchhh
Confidence 9999988889999999999998 3478999999999999999999999999966 9999999998743 22 223
Q ss_pred CcccccceeeeeecCCCCc-ccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCC
Q 012353 157 RPTGGAAAVVMLVGPDAPV-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQ 235 (465)
Q Consensus 157 ~~t~GdGA~A~Ll~~~~~~-~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~ 235 (465)
..+|||||+|+||++.+.. .+.....++.......+..|. ..++.++|+.+++.+.+.+.+++++++++. +
T Consensus 153 ~~~~gdGaaA~vL~~~~~~~~i~~~~~~~~g~~~~~~~~p~--~~~~~~~g~~~~~~~~~~~~~~i~~al~~a------g 224 (309)
T 2ebd_A 153 CVLFGDGAGAVVVTRSEDKSDILATRMYAEGSLEELLHADN--CGYIRMKGRELFKVAVRSMEEVCREVLEKA------G 224 (309)
T ss_dssp TTTBCEEEEEEEEEECSSSCEEEEEEEEECGGGGGGEEECT--TCCEEECHHHHHHHHHHHHHHHHHHHHHHH------T
T ss_pred ccccccccEEEEEEecCCCCceeEEEEEecCCccceeEeCC--CCeEEEccHHHHHHHHHHHHHHHHHHHHHc------C
Confidence 4689999999999987531 111101122222112233442 234567888777778888888888888876 7
Q ss_pred CCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccC
Q 012353 236 FSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQ 315 (465)
Q Consensus 236 ~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~ 315 (465)
++++|||++++|+++.++.+.+.+.| |++.++.+. ++
T Consensus 225 l~~~did~~~~H~~~~~~~~~~~~~l------------------------g~~~~~~~~---------~~---------- 261 (309)
T 2ebd_A 225 VKPEEVSLVIPHQANVRIINALAEKL------------------------NIPKEKVFV---------NI---------- 261 (309)
T ss_dssp CCGGGCSEEEECCSCHHHHHHHHHHT------------------------TCCGGGBCC---------CH----------
T ss_pred CCHHHCCEEEEcCCCHHHHHHHHHHh------------------------CCCHHHhhh---------hH----------
Confidence 99999999999999999999877766 565544321 12
Q ss_pred CCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEE
Q 012353 316 PSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL 370 (465)
Q Consensus 316 ~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~ 370 (465)
.++||+++||++++|..++++ +++++|+++++++||+|+++++++++|
T Consensus 262 ------~~~Gh~~~As~~~~L~~~~~~-g~~~~G~~~l~~~~G~G~~~~~~~l~~ 309 (309)
T 2ebd_A 262 ------QKYGNTSAASIPIALHEAIKE-GKVKRGDLILMTAMGGGLTWGAVLLRY 309 (309)
T ss_dssp ------HHHCBCGGGHHHHHHHHHHHT-TCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred ------hhhcchHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchhhhhEEEEEEC
Confidence 689999999999999999998 788899999999999999999999986
No 24
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=100.00 E-value=1.2e-40 Score=331.93 Aligned_cols=305 Identities=18% Similarity=0.242 Sum_probs=247.7
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcCCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEE
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV 80 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 80 (465)
|+++|.++++|+|+.+++++++++..+.+++|+ ++||++|++ ..++++..+|+++|++++|+++|+++++||.|++
T Consensus 1 m~~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~--~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~ 78 (313)
T 1zow_A 1 MNVGIKGFGAYAPEKIIDNAYFEQFLDTSDEWISKMTGIKERHW--ADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIV 78 (313)
T ss_dssp CCEEEEEEEEECCSCEEEGGGGGGTSSCCHHHHHHHHCCSEEEC--CCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEE
T ss_pred CceEEEEEEEECCCccccHHHHHHhcCCCHHHHHHhhCceEEEe--cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 468999999999999999999999988888887 478888874 4678999999999999999999999999999999
Q ss_pred EeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-ccCCCC---
Q 012353 81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-YAEGPA--- 156 (465)
Q Consensus 81 ~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-y~~~~~--- 156 (465)
+|+++++..|+++.+|+..||+ ++++++++.++|++++.||..|..+|++|.. +.|||+++|... ..++.+
T Consensus 79 ~~~~~~~~~~~~a~~v~~~lgl---~~~~~~~v~~aCas~~~al~~A~~~i~~g~~--~~vLv~g~e~~s~~~~~~d~~~ 153 (313)
T 1zow_A 79 ATATGDMPFPTVANMLQERLGT---GKVASMDQLAACSGFMYSMITAKQYVQSGDY--HNILVVGADKLSKITDLTDRST 153 (313)
T ss_dssp ECSSCSCSSSCHHHHHHHHHTC---CSCCEEEEECGGGHHHHHHHHHHHHHHTTSC--SCEEEEEEEEGGGTCCTTCHHH
T ss_pred EcCCCCCCCCcHHHHHHHHhCC---CCCcEEEECCcCHHHHHHHHHHHHHHHCCCC--CEEEEEEEcccccccCcccccc
Confidence 9999988889999999999997 3478999999999999999999999999966 999999999863 223222
Q ss_pred CcccccceeeeeecCCCC-cccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCC
Q 012353 157 RPTGGAAAVVMLVGPDAP-VAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQ 235 (465)
Q Consensus 157 ~~t~GdGA~A~Ll~~~~~-~~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~ 235 (465)
..+|||||+|+||++.+. ..+......++......++.|.. ..+..++|+..++.+.+.+.+++++++++. |
T Consensus 154 ~~~~gdGa~A~vl~~~~~~~~i~~~~~~~~g~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~i~~al~~a------g 226 (313)
T 1zow_A 154 AVLFGDGAGAVIIGEVSEGRGIISYEMGSDGTGGKHLYLDKD-TGKLKMNGREVFKFAVRIMGDASTRVVEKA------N 226 (313)
T ss_dssp HTTBCEEEEEEEEEECSTTCEEEEEEEEECGGGGGGEEECTT-TCCEEECHHHHHHHHHHHHHHHHHHHHHHT------T
T ss_pred eeeeccceEEEEEEecCCCCceeEEEEEEcCCCcCeEEecCC-CCeeEeccHHHHHHHHHHHHHHHHHHHHHc------C
Confidence 367999999999987653 11110011122111122344431 123446777776777777888888887775 7
Q ss_pred CCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccC
Q 012353 236 FSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQ 315 (465)
Q Consensus 236 ~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~ 315 (465)
++++|||++++|++++++.+.+.+.| +++.++.+. ++
T Consensus 227 l~~~did~~~~H~~~~~~~d~~~~~l------------------------g~~~~~~~~---------~~---------- 263 (313)
T 1zow_A 227 LTSDDIDLFIPHQANIRIMESARERL------------------------GISKDKMSV---------SV---------- 263 (313)
T ss_dssp CCGGGCSEEEECCSCHHHHHHHHHHH------------------------TCCGGGBCC---------CH----------
T ss_pred CCHHHCCEEEEcCCCHHHHHHHHHHh------------------------CCCHHHHHH---------hH----------
Confidence 99999999999999999999988777 555544321 12
Q ss_pred CCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEe
Q 012353 316 PSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLS 371 (465)
Q Consensus 316 ~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~ 371 (465)
.++||+++||++++|..++++ +++++|+++++++||+|+++++++++|+
T Consensus 264 ------~~~Gh~~~as~~~~L~~~~~~-~~~~~g~~vl~~~~G~G~t~~~~~l~~~ 312 (313)
T 1zow_A 264 ------NKYGNTSAASIPLSIDQELKN-GKLKDDDTIVLVGFGGGLTWGAMTIKWG 312 (313)
T ss_dssp ------HHHCBCGGGHHHHHHHHHHHT-TCCCTTCEEEEEEEETTTEEEEEEEECC
T ss_pred ------hhhCchHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchhhhheEEEEEeC
Confidence 689999999999999999998 7888999999999999999999999985
No 25
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=100.00 E-value=2.4e-41 Score=347.69 Aligned_cols=310 Identities=15% Similarity=0.151 Sum_probs=246.0
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcCCCh---------hhh--hhhhcCeEE-ecCCC--------------------C
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDGASK---------GKY--TIGLGQECM-AFCSE--------------------V 50 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~---------~k~--~~Gig~r~~-av~~~--------------------~ 50 (465)
|+++|.++++|+|+++++++++++..+... +|+ ++||++|++ +.+++ +
T Consensus 31 ~~~~I~~ig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~a~~~~~~~~~~~~~p~~~~~r~~~~~ 110 (393)
T 1ted_A 31 TVAVIEGLATGTPRRVVNQSDAADRVAELFLDPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPATIRDRMHLFY 110 (393)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHHHHHHTC----CCTTHHHHHHHTSCCSEEECSSCTTSTTHHHHTTCSSCHHHHHHHHH
T ss_pred cccEEEEeeeeCCCcccCHHHHHHHHHHhcccccHHHHHHHHHHhCCcCcceeeecChHhcccccccCCCCHHHHHHHHh
Confidence 468999999999999999999999877542 355 589999986 53210 4
Q ss_pred CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEee-cCcChhHHHHHHHHHH
Q 012353 51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS-TNACYGGTAALFNCVN 129 (465)
Q Consensus 51 Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di-~~aC~gg~~AL~~A~~ 129 (465)
++..+|+++|++++|+++|+++++||.||++|+++ +..|+++.+|+..||+ ...+.++++ +++|+|++.||.+|..
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl--~~~~~~~~v~~~aCas~~~Al~~A~~ 187 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTG-FIAPGVDVAIVKELGL--SPSISRVVVNFMGCAAAMNALGTATN 187 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSC-CCSSCHHHHHHHHHTC--CTTCEEEEEESCGGGHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccChHHHHHHHHcCc--CCCcceeEeccchhHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999 6789999999999998 455788998 8999999999999999
Q ss_pred HHHcCCCCCCEEEEEEeccccc-cCC-CC------CcccccceeeeeecCCCCc-----ccccccccccc---cCc--cc
Q 012353 130 WVESSSWDGRYGLVVCTDSAVY-AEG-PA------RPTGGAAAVVMLVGPDAPV-----AFESKLRGSHM---SHA--YD 191 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVasD~~~y-~~~-~~------~~t~GdGA~A~Ll~~~~~~-----~~~~~~~~~~~---~~~--~d 191 (465)
+|++|.. ++||||++|..+. .++ .. ..+|||||+|+||++.+.. .+. .+.+..+ .+. .+
T Consensus 188 ~i~~G~~--~~vLv~g~e~~s~~~~~~~~r~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~-~i~~~~~~~~~d~~~~~ 264 (393)
T 1ted_A 188 YVRAHPA--MKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKV-VVRSSFSQLLDNTEDGI 264 (393)
T ss_dssp HHHHSTT--CEEEEEEEEECGGGCCCCSSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCE-EEEEEEEEECTTCTTSE
T ss_pred HHHcCCC--CEEEEEEEEeccccCCCCCCHHHhhhhhhhcCccEEEEEecCCCccccCccee-eeeccceEEcCCchhhc
Confidence 9999966 9999999998743 222 22 3579999999999876421 100 0112111 111 12
Q ss_pred ccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhccccc
Q 012353 192 FYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNAS 271 (465)
Q Consensus 192 f~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~ 271 (465)
.|++. ...+..++|+..+..+.+.+.++++.++++. |++++|||+|++||++.++++.+.++|
T Consensus 265 ~~~~~-~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~a------gl~~~dId~~~~H~~~~~i~d~~~~~l---------- 327 (393)
T 1ted_A 265 VLGVN-HNGITCELSENLPGYIFSGVAPVVTEMLWDN------GLQISDIDLWAIHPGGPKIIEQSVRSL---------- 327 (393)
T ss_dssp EEEEE-TTEEEEEECTTHHHHHHHHHHHHHHHHHHHT------TCCGGGCSCEEECCSCHHHHHHHHHHH----------
T ss_pred cceec-CCCeEEecCchHHHHHHHHHHHHHHHHHHHc------CCCHhHCCEEEECCCcHHHHHHHHHHc----------
Confidence 33322 1123345677777777788888888888876 799999999999999999999998888
Q ss_pred chhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCC-CCCC
Q 012353 272 SVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSE-LDGK 350 (465)
Q Consensus 272 ~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~-~~G~ 350 (465)
+++.++.+. ...++ +++||+++||+|++|.+++++ +++ ++|+
T Consensus 328 --------------gl~~~k~~~------s~~~~----------------~~~GNt~sAsi~~~L~~~~~~-g~~~~~Gd 370 (393)
T 1ted_A 328 --------------GISAELAAQ------SWDVL----------------ARFGNMLSVSLIFVLETMVQQ-AESAKAIS 370 (393)
T ss_dssp --------------TCCGGGGHH------HHHHH----------------HHHCBCTHHHHHHHHHHHHHS-CSSSSSSE
T ss_pred --------------CCCHHHHHH------HHHHH----------------HhhCCchHhHHHHHHHHHHhc-CccCCCCC
Confidence 777765421 01234 899999999999999999998 777 4999
Q ss_pred EEEEEEeccchheeeeEEEEeC
Q 012353 351 RVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 351 rill~syGsG~~~~~~~~~~~~ 372 (465)
+|++++||+|++|++++++|..
T Consensus 371 ~vll~~~G~G~t~~~~~l~~~~ 392 (393)
T 1ted_A 371 TGVAFAFGPGVTVEGMLFDIIR 392 (393)
T ss_dssp EEEEEEEETTTEEEEEEEEECC
T ss_pred eEEEEEeccchhhhhhheeecc
Confidence 9999999999999999999864
No 26
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=100.00 E-value=5.5e-41 Score=349.77 Aligned_cols=316 Identities=17% Similarity=0.199 Sum_probs=241.5
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcC----CC--hhh---h--hhhhcCeEEecCCCC-------------------CC
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDG----AS--KGK---Y--TIGLGQECMAFCSEV-------------------ED 52 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g----~~--~~k---~--~~Gig~r~~av~~~~-------------------Ed 52 (465)
|++.|.+|++|+|+++|+|+++++..+ .. .+| + .+||.+|+++..+.. ++
T Consensus 30 ~~v~I~gigt~lP~~~v~n~el~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~p~~~~~~~ps~~~r~~~~~~~ 109 (465)
T 3e1h_A 30 LGLSITGLGVQYPPYSLGPDAIDILSKRYHPESPAMKKVLAINRYTGIDQRSSIGNPDHPLVNKPNPPTVKELHEVFMSD 109 (465)
T ss_dssp CCEEEEEEEEECCSSCCBCTHHHHHTCSSSCCCHHHHHHHHHTTTSCCCCBCCSSCTTCGGGSSSSCCCHHHHHHHHHHH
T ss_pred CCEEEEEEEEECCCcEEcHHHHHHHHHHhcccchhHHHHHHHHHhcCCceEEEeecccCcccccccCCCHHHHHHHHHhh
Confidence 679999999999999999999977643 12 234 3 489999997643211 23
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEee-cCcChhHHHHHHHHHHHH
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS-TNACYGGTAALFNCVNWV 131 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di-~~aC~gg~~AL~~A~~~l 131 (465)
+.+|+++|+++||+++|+++++||+||++|++ .+..|+++.+|+++||+ .+.+.+||+ +++|+||+.||.+|..+|
T Consensus 110 a~~La~~Aa~~AL~~agi~~~dId~li~~t~t-~~~~P~~a~~v~~~LGl--~~~~~~~dv~~~~Csgg~~AL~~A~~~i 186 (465)
T 3e1h_A 110 GVPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSANPGYDHYVAKELGL--SDRLEKVLLHGIGCSGGLAALRTAANLC 186 (465)
T ss_dssp THHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCCSSCHHHHHHHHHTC--CTTCEEEEECSCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeC-CCCCCcHHHHHHHHhCC--CCCeeEEEecCCcchHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999 57799999999999998 445558999 799999999999999999
Q ss_pred Hc----CCCCCCEEEEEEecccc-ccC------------CCCCcccccceeeeeecCCCCc-cccc---ccccccc----
Q 012353 132 ES----SSWDGRYGLVVCTDSAV-YAE------------GPARPTGGAAAVVMLVGPDAPV-AFES---KLRGSHM---- 186 (465)
Q Consensus 132 ~s----g~~~~~~aLVVasD~~~-y~~------------~~~~~t~GdGA~A~Ll~~~~~~-~~~~---~~~~~~~---- 186 (465)
++ |.. ++||||++|..+ +.+ .....+|||||+|+||++++.. ..+. ...+...
T Consensus 187 ~a~~~~G~~--~~vLVvg~E~~S~~~~~~~~~~~~~~~d~~t~~LFGDGAaAvVl~~~~~~~~~~~~~~~l~~~~~~~~p 264 (465)
T 3e1h_A 187 LGHTARGKP--ARILVLALEVSTTMVRSELESIDALQETRIGIALFSDCASAVILSNGIGEAPGKPAIYDLLGWENRVIP 264 (465)
T ss_dssp HHHHHTTCC--CEEEEEEEECCGGGHHHHHHHHHHHTCCCCHHHHBCCEEEEEEEECCTTCCTTCCCSEEEEEEEEEECT
T ss_pred hcccccCCC--CEEEEEEEeecchhcCcccccccccccccccccccccceeEEEEEccCCCccccccceeeccceEEEec
Confidence 97 855 999999999983 211 1223679999999999986421 0000 0111111
Q ss_pred --cCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhh-hhcCCCCCCCCceeeccCCchHHHHHHHHHhhh
Q 012353 187 --SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEK-LEGKQFSLSNADYFVFHSPYNKLVQKSFARLLF 263 (465)
Q Consensus 187 --~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~-~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~ 263 (465)
.+... |... ...+..++|+..++...+.+.++++.++++... +..++++++|||++ +||++.+|++.+.++|
T Consensus 265 ~~~~~~~-~~~~-~~g~~~~~g~~V~~~a~~~v~~~i~~~L~~~g~~L~~agl~~~DId~~-~Hqan~rIl~~v~~~L-- 339 (465)
T 3e1h_A 265 DSEHDLG-FDVD-PMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWA-MHPGGATILSGAESAM-- 339 (465)
T ss_dssp TCTTTEE-EEEE-TTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSGGGSEEE-ECCSSHHHHHHHHHHH--
T ss_pred CCccccC-cccc-CCCceEecChHHHHHHHHHHHHHHHHHHHhccccccccCCCHHHceEE-ecCCChHHHHHHHHHh--
Confidence 01111 1111 112345678877777778888999988887431 23457899999977 9999999999999998
Q ss_pred hhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhc
Q 012353 264 NDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNK 343 (465)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~ 343 (465)
+++.++...+ ...+ +++|||++||+|++|..++++.
T Consensus 340 ----------------------gl~~ek~~~s------~~~l----------------~~yGNtsSASip~aL~~~~~~~ 375 (465)
T 3e1h_A 340 ----------------------GLTPEHMRAS------YDRY----------------INHGNSSSATIFSVLNRLREKD 375 (465)
T ss_dssp ----------------------TCCGGGGHHH------HHHH----------------HHHCBCGGGHHHHHHHHHTSTT
T ss_pred ----------------------CcCHHHhHHH------HHHH----------------hcceechHhHHHHHHHHHHHhc
Confidence 8888765321 1223 7999999999999999998762
Q ss_pred -CCCCCC----CEEEEEEeccchheeeeEEEEeC
Q 012353 344 -HSELDG----KRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 344 -~~~~~G----~rill~syGsG~~~~~~~~~~~~ 372 (465)
+++++| ++|+|++||+|++|++++++|..
T Consensus 376 ~g~l~~Gg~~~d~vll~gfG~Glt~~~~llr~~~ 409 (465)
T 3e1h_A 376 MDALAPGGKVKEYVVGCAFGPGINVEMCMLKRRM 409 (465)
T ss_dssp TTSCSSSSCCCSEEEEEEEETTTEEEEEEEEECC
T ss_pred ccccCCCCCCCCEEEEEEEhHHHhhhheeeEEec
Confidence 356666 99999999999999999999976
No 27
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=100.00 E-value=3.1e-40 Score=331.92 Aligned_cols=306 Identities=18% Similarity=0.214 Sum_probs=245.5
Q ss_pred eeEEeEEEEecCCceechHHHHHhcCCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEE
Q 012353 4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVG 81 (465)
Q Consensus 4 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~ 81 (465)
+++|.++++|+|+.+++++++++..+.+.+|+ ..||.+|+++ .++++..+|+++|++++|+++|+++++||.|+++
T Consensus 12 ~~~I~g~g~~~P~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~~--~~~~~~~~la~~A~~~al~~ag~~~~~id~vi~~ 89 (335)
T 1u6e_A 12 SVGLLSVGAYRPERVVTNDEICQHIDSSDEWIYTRTGIKTRRFA--ADDESAASMATEACRRALSNAGLSAADIDGVIVT 89 (335)
T ss_dssp CEEEEEEEEECCSEEEEHHHHTTSSSCCHHHHHHHHCCSEEEEC--CTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEE
T ss_pred ceEEEEEEEECCCceecHHHHHHHhCCCHHHHHHhcCCceEeec--CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 68999999999999999999999988888887 4788888754 6789999999999999999999999999999999
Q ss_pred eecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc-cCC---CCC
Q 012353 82 SETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEG---PAR 157 (465)
Q Consensus 82 T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~---~~~ 157 (465)
|+++++..|+++.+|+..||+ ++++++++.++|+|++.||..|..+|++|.. ++|||+++|..+. .++ ...
T Consensus 90 t~~~~~~~~~~a~~v~~~lgl---~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~--~~vLv~g~e~~s~~~~~~d~~~~ 164 (335)
T 1u6e_A 90 TNTHFLQTPPAAPMVAASLGA---KGILGFDLSAGAAGFGYALGAAADMIRGGGA--ATMLVVGTEKLSPTIDMYDRGNC 164 (335)
T ss_dssp CSCCCCSSSCHHHHHHHHHTC---TTSEEEEEECGGGHHHHHHHHHHHHHHHTSC--SSEEEEEEEECGGGCCTTCTTTT
T ss_pred cCCCCCCCChHHHHHHHHhCC---CCCcEeeeccccHHHHHHHHHHHHHHHcCCC--CEEEEEEEcccccccCccccccc
Confidence 999988889999999999997 4688999999999999999999999999966 9999999998742 222 245
Q ss_pred cccccceeeeeecCCCCcccccccccccccCcccc--------cc--cCCCCCCcccCCchhHHHHHHHHHHHHHHHHHH
Q 012353 158 PTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDF--------YK--PNLASEYPVVDGKLSQTCYLMALDTCYKCLCSK 227 (465)
Q Consensus 158 ~t~GdGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df--------~~--p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~ 227 (465)
.+|||||+|+||++.+...+.....+++......+ |+ |.....+..++|+..+..+.+.+.+++++++++
T Consensus 165 ~~~gDGA~A~vl~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~ 244 (335)
T 1u6e_A 165 FIFADGAAAVVVGETPFQGIGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDA 244 (335)
T ss_dssp TTBCEEEEEEEEEECSSCCBCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEeccccEEEEEEecCCCCeeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999987652111111112221111111 11 111112344677766565567777788888777
Q ss_pred hhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCC-ccccchhHHHHHHhhh
Q 012353 228 YEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGD-ESYQSRDLEKVSQQLA 306 (465)
Q Consensus 228 ~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~d~~~~k~~~~~~ 306 (465)
. |++++|||+|++|+++.++++.+.+.| |++.+ +.+. ++
T Consensus 245 a------gl~~~dId~~~~H~~~~~~~~~~~~~l------------------------g~~~~~~~~~---------~~- 284 (335)
T 1u6e_A 245 A------GVRPDQIDVFVPHQANSRINELLVKNL------------------------QLRPDAVVAN---------DI- 284 (335)
T ss_dssp H------TCCGGGCCEEEECCSCHHHHHHHHHHH------------------------TCCTTCEECC---------TH-
T ss_pred c------CCCHHHCCEEEECCCCHHHHHHHHHHc------------------------CCCchhhhhh---------hh-
Confidence 6 799999999999999999999998887 66654 2221 12
Q ss_pred hhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEeC
Q 012353 307 KPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 307 ~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~~ 372 (465)
.++||+++||++++|.+++++ +++++|+++++++||+|+++++++++|.+
T Consensus 285 ---------------~~~Gnt~sAs~~~~L~~~~~~-~~~~~g~~~l~~~~G~G~t~~~~vl~~~~ 334 (335)
T 1u6e_A 285 ---------------EHTGNTSAASIPLAMAELLTT-GAAKPGDLALLIGYGAGLSYAAQVVRMPK 334 (335)
T ss_dssp ---------------HHHCBCGGGHHHHHHHHHHHH-TSSCTTCEEEEEEEETTTEEEEEEEECCC
T ss_pred ---------------hhhCcHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEehhheeEEEEEEeCC
Confidence 689999999999999999998 77889999999999999999999999854
No 28
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=100.00 E-value=1.7e-40 Score=342.62 Aligned_cols=306 Identities=16% Similarity=0.211 Sum_probs=237.1
Q ss_pred CceeEEeEEEEecCCceechHHHHHhc-C-C--C--------hhhh--hhhhcCeEEecCCC------------------
Q 012353 2 AKNVGILAMDIYFPPTCVQQEALEAHD-G-A--S--------KGKY--TIGLGQECMAFCSE------------------ 49 (465)
Q Consensus 2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~-g-~--~--------~~k~--~~Gig~r~~av~~~------------------ 49 (465)
.++++|.++++|+|+.+++++++++.. + . + .+|+ ++||.+|+++.++.
T Consensus 27 ~~~~~I~~ig~~~P~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~a~~~~~~~~~p~~~~~~~~~~~~ 106 (406)
T 2d3m_A 27 DGTATVMAIGTAHPPHIFPQDTYADVYFRATNSEHKVELKKKFDHICKKTMIGKRYFNYDEEFLKKYPNITSYDEPSLND 106 (406)
T ss_dssp SSCCEEEEEEEECCSEEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHHSCCCEEEESCCHHHHTTCTTTSSSSSSCHHH
T ss_pred CCCeEEEEEeecCCCCccCHHHHHHHHHHhccccchhhHHHHHHHHHhccCCcceEEeeChhhhccCcccccccCCChHH
Confidence 357999999999999999999999865 2 1 1 2345 57999998763220
Q ss_pred -----CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCce-eEeecCcChhHHHH
Q 012353 50 -----VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE-GVDSTNACYGGTAA 123 (465)
Q Consensus 50 -----~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~-~~di~~aC~gg~~A 123 (465)
.++..+|+++|++++|+++|+++++||.||++|+++ +..|+++.+|+..||+ ...+. +++++++|+|++.|
T Consensus 107 r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl--~~~~~~~~~v~~aC~s~~~a 183 (406)
T 2d3m_A 107 RQDICVPGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCG-VDMPSADFQCAKLLGL--HANVNKYCIYMQGAYAGGTV 183 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CEESCHHHHHHHHHTC--CTTCEEEEEESCGGGHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CCCCCHHHHHHHHcCc--CCCcceeeeEcCccHHHHHH
Confidence 168899999999999999999999999999999998 5689999999999998 44565 89999999999999
Q ss_pred HHHHHHHHHcCCCCCCEEEEEEecccc--ccCCCC--------CcccccceeeeeecCCCCccccc---ccccccccCcc
Q 012353 124 LFNCVNWVESSSWDGRYGLVVCTDSAV--YAEGPA--------RPTGGAAAVVMLVGPDAPVAFES---KLRGSHMSHAY 190 (465)
Q Consensus 124 L~~A~~~l~sg~~~~~~aLVVasD~~~--y~~~~~--------~~t~GdGA~A~Ll~~~~~~~~~~---~~~~~~~~~~~ 190 (465)
|.+|..+|++|.. ++||||++|..+ +.++.+ ..+|||||+|+||++++...+.. .+.+..
T Consensus 184 l~~A~~~i~~g~~--~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~l~~~~----- 256 (406)
T 2d3m_A 184 MRYAKDLAENNRG--ARVLVVCAELTIMMLRAPNETHLDNAIGISLFGDGAAALIIGSDPIIGVEKPMFEIVCTK----- 256 (406)
T ss_dssp HHHHHHHHHTSTT--CEEEEEEEECGGGTCCCCCSTTHHHHHHHTTBCCEEEEEEEESSCCTTTCCCCEEEEEEE-----
T ss_pred HHHHHHHHHcCCC--CEEEEEEEEecchheeCCcccchhhhhccceeccceEEEEEecCCCCccCCCceEEEecc-----
Confidence 9999999999965 999999999873 333321 35899999999999875311100 011110
Q ss_pred cccccCCCCC---------CcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCce----eeccCCchHHHHHH
Q 012353 191 DFYKPNLASE---------YPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADY----FVFHSPYNKLVQKS 257 (465)
Q Consensus 191 df~~p~~~~~---------~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~----~~~H~p~~km~~~~ 257 (465)
..+.|..... +....|+..++.+.+.+.++++.++++. |++++ ||+ |++||++.++++.+
T Consensus 257 ~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~a------gl~~~-id~~di~~v~Hq~~~~i~~~~ 329 (406)
T 2d3m_A 257 QTVIPNTEDVIHLHLRETGMMFYLSKGSPMTISNNVEACLIDVFKSV------GITPP-EDWNSLFWIPHPGGRAILDQV 329 (406)
T ss_dssp EEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHTT------TCCCC-SSGGGSEEEECCSCHHHHHHH
T ss_pred cEEcCCCchhcceeeccCceEEEeCchHHHHHHHHHHHHHHHHHHhc------CCCCC-CCccceEEEECCCCHHHHHHH
Confidence 0112221110 0112355666667778888888887765 78877 888 99999999999999
Q ss_pred HHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHH
Q 012353 258 FARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALA 337 (465)
Q Consensus 258 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~ 337 (465)
.++| +++.++.+.++ ..+ +++|||++||+|++|.
T Consensus 330 ~~~l------------------------gl~~~k~~~s~------~~l----------------~~~GNt~sAsi~~~L~ 363 (406)
T 2d3m_A 330 EAKL------------------------KLRPEKFRAAR------TVL----------------WDYGNMVSASVGYILD 363 (406)
T ss_dssp HHHT------------------------TCCTTTTHHHH------HHH----------------HHHCBCGGGHHHHHHH
T ss_pred HHHc------------------------CCCHHHHHHHH------HHH----------------HHcCCchhhHHHHHHH
Confidence 8887 78877654210 123 7999999999999999
Q ss_pred HHHHhcCCCCCC--------CEEEEEEeccchheeeeEEEEeC
Q 012353 338 SLIHNKHSELDG--------KRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 338 ~ll~~~~~~~~G--------~rill~syGsG~~~~~~~~~~~~ 372 (465)
+++++ ++ ++| ++|+|++||+|++|++++++|.+
T Consensus 364 ~~~~~-g~-~~G~~~~g~~~d~vll~~fG~G~t~~~~ll~~~~ 404 (406)
T 2d3m_A 364 EMRRK-SA-AKGLETYGEGLEWGVLLGFGPGITVETILLHSLP 404 (406)
T ss_dssp HHHHH-HH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred HHHHh-cc-ccCCCccCCCcceEEEEEeccchhhhhHHhhhcc
Confidence 99988 55 677 99999999999999999999976
No 29
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=100.00 E-value=5.8e-41 Score=343.58 Aligned_cols=306 Identities=14% Similarity=0.132 Sum_probs=236.3
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcCCC------h---hhh--hhhhcCeEEecCCC-----------------CCCHH
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDGAS------K---GKY--TIGLGQECMAFCSE-----------------VEDVI 54 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~------~---~k~--~~Gig~r~~av~~~-----------------~Ed~~ 54 (465)
|+++|.++++|+|+.+++++++++..+.. . +|+ ++||.+|+++ .+ +++..
T Consensus 8 ~m~~I~gig~~~P~~~v~~~~l~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~--~~~~~~~~~~~~~~r~~~~~~~~~ 85 (382)
T 1u0m_A 8 FMATLCRPSVSVPEHVITMEETLELARRRHTDHPQLPLALRLIENTGVRTRHIV--QPIEDTLEHPGFEDRNKVYEREAK 85 (382)
T ss_dssp --CEECCCEEECCSEEEEHHHHHHHHHHHHTTCTTHHHHHHHHHHTCCCEEEES--SCHHHHTSCCCHHHHHHHHHHHHH
T ss_pred cceEEEEEEEeCCCcccCHHHHHHHHHHhccChhhHHHHHHHHHhcCCCcceee--cChhhhccCCChhHHHHHHHHHHH
Confidence 34899999999999999999999876543 2 234 4799999865 44 67889
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEee-cCcChhHHHHHHHHHHHHHc
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS-TNACYGGTAALFNCVNWVES 133 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di-~~aC~gg~~AL~~A~~~l~s 133 (465)
+|+++|++++|+++|+++++||.||++|+++ +..|+++.+|+..||+ ..++.++++ +++|+|++.||..|..+|++
T Consensus 86 ~la~~Aa~~aL~~agl~~~~id~vi~~t~~~-~~~p~~a~~v~~~lGl--~~~~~~~~v~~~aCss~~~Al~~A~~~i~~ 162 (382)
T 1u0m_A 86 SRVPAVIQRALDDAELLATDIDVIIYVSCTG-FMMPSLTAWLINEMGF--DSTTRQIPIAQLGCAAGGAAINRAHDFCTA 162 (382)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEEECSSS-CCSSCHHHHHHHHTTC--CTTCEEEEECSCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHhCC--CCCcceEEccCCcCHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999998 6789999999999998 455899999 89999999999999999999
Q ss_pred CCCCCCEEEEEEeccccc-cCCCC--------CcccccceeeeeecCCCCcccccccccccc---cCcc--cccccCCCC
Q 012353 134 SSWDGRYGLVVCTDSAVY-AEGPA--------RPTGGAAAVVMLVGPDAPVAFESKLRGSHM---SHAY--DFYKPNLAS 199 (465)
Q Consensus 134 g~~~~~~aLVVasD~~~y-~~~~~--------~~t~GdGA~A~Ll~~~~~~~~~~~~~~~~~---~~~~--df~~p~~~~ 199 (465)
|.. ++||||++|..+. .++.+ ..+|||||+|+||++.+.... .+.+..+ .+.. ..|.... .
T Consensus 163 g~~--~~vLv~g~e~~s~~~~~~d~~~~~~~~~~lfGDGA~A~vL~~~~~~g~--~i~~~~~~~~~~~~~~~~~~~~~-~ 237 (382)
T 1u0m_A 163 YPE--ANALIVACEFCSLCYQPTDLGVGSLLCNGLFGDGIAAAVVRGRGGTGV--RLERNGSYLIPKTEDWIMYDVKA-T 237 (382)
T ss_dssp STT--CEEEEEEEEEGGGGCCTTCCSHHHHHHHHHBCEEEEEEEEETTTCSEE--EEEEEEEEECSSCTTTEEEEEET-T
T ss_pred CCC--CEEEEEEEeccchhcCcccCCHHHhhccchhcCCcEEEEEeccCCCCc--EEEEeeeEecCChHHhcCceecC-C
Confidence 965 9999999998742 22221 357999999999997653110 1112111 1111 1122110 0
Q ss_pred CCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhh
Q 012353 200 EYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKE 279 (465)
Q Consensus 200 ~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~ 279 (465)
.+....++.....+.+.+. +++.++++. |++++|||+|++|+++.++++.+.++|
T Consensus 238 g~~~~~~~~v~~~~~~~~~-~i~~aL~~a------gl~~~dId~v~~H~~~~~i~d~~~~~l------------------ 292 (382)
T 1u0m_A 238 GFHFLLDKRVPATMEPLAP-ALKELAGEH------GWDASDLDFYIVHAGGPRILDDLSTFL------------------ 292 (382)
T ss_dssp EEEEEECTTTGGGHHHHHH-HHHHHHHTT------SCCSSCCSCCEEECSHHHHHHHHHHHS------------------
T ss_pred ceEEEeCcHHHHHHHHHHH-HHHHHHHHc------CCCHHHCCEEEECCCCHHHHHHHHHHc------------------
Confidence 0111223333344456667 777777665 899999999999999999999988877
Q ss_pred ccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEecc
Q 012353 280 KLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGS 359 (465)
Q Consensus 280 ~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGs 359 (465)
+++.++... ...++ +++||+++||+|++|.+++++ +++++|++|++++||+
T Consensus 293 ------gl~~~k~~~------s~~~~----------------~~~Gnt~sAsi~~~L~~~~~~-g~~~~Gd~vll~~~G~ 343 (382)
T 1u0m_A 293 ------EVDPHAFRF------SRATL----------------TEYGNIASAVVLDALRRLFDE-GGVEEGARGLLAGFGP 343 (382)
T ss_dssp ------CSCGGGGHH------HHHHH----------------HHTCBCTTHHHHHHHHHHHHS-CCCCSSCCCEEEEEET
T ss_pred ------CCCHHHHHH------HHHHH----------------HHhCCchhhHHHHHHHHHHHh-cCCCCCCEEEEEEEcc
Confidence 777665321 01233 899999999999999999998 7889999999999999
Q ss_pred chheeeeEEEEeC
Q 012353 360 GLTATMFSLKLSE 372 (465)
Q Consensus 360 G~~~~~~~~~~~~ 372 (465)
|++|++++++|..
T Consensus 344 G~t~~~~vl~~~~ 356 (382)
T 1u0m_A 344 GITAEMSLGCWQT 356 (382)
T ss_dssp TTEEEEEEEEEEC
T ss_pred cceeEEEEEEEee
Confidence 9999999999986
No 30
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=100.00 E-value=1.3e-40 Score=343.20 Aligned_cols=302 Identities=15% Similarity=0.207 Sum_probs=235.6
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcC--C----------Chhhh--hhhhcCeEEecCCCC------------------
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDG--A----------SKGKY--TIGLGQECMAFCSEV------------------ 50 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g--~----------~~~k~--~~Gig~r~~av~~~~------------------ 50 (465)
++++|.++++|+|+.+|+|+++++..+ . ..+|+ ++||.+|+++ .++
T Consensus 20 ~~~~I~gig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~--~~~~~~~~~p~~~d~~~~~~~ 97 (402)
T 1ee0_A 20 GLATILAIGTATPPNCVAQADYADYYFRVTKSEHMVDLKEKFKRICEKTAIKKRYLA--LTEDYLQENPTMCEFMAPSLN 97 (402)
T ss_dssp CCCEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECS--CCHHHHHHSGGGGSTTSSCHH
T ss_pred CCcEEEEeeecCCCcccCHHHHHHHHHHhhcccchhhhHHHHHHHHHhcCccceeEe--cCchhhccCcccccccCCCHH
Confidence 568999999999999999999998752 1 11355 4899998865 333
Q ss_pred -------CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCce-eEeecCcChhHHH
Q 012353 51 -------EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE-GVDSTNACYGGTA 122 (465)
Q Consensus 51 -------Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~-~~di~~aC~gg~~ 122 (465)
++..+|+++|++++|+++|+++++||.||++|+++ +..|+++.+|++.||+ ...+. +++++++|+|++.
T Consensus 98 ~r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl--~~~~~~~~~v~~aCss~~~ 174 (402)
T 1ee0_A 98 ARQDLVVTGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAG-VDMPGADYQLVKLLGL--SPSVKRYMLYQQGAAAGGT 174 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEECSSC-CEESCHHHHHHHHHTC--CTTCEEEEECSCCTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CCCChHHHHHHHHcCc--CCCcceeeEECchhHHHHH
Confidence 68899999999999999999999999999999987 5689999999999998 45564 9999999999999
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEEecccc--ccCCC--------CCcccccceeeeeecCCCCccccc---ccccccccCc
Q 012353 123 ALFNCVNWVESSSWDGRYGLVVCTDSAV--YAEGP--------ARPTGGAAAVVMLVGPDAPVAFES---KLRGSHMSHA 189 (465)
Q Consensus 123 AL~~A~~~l~sg~~~~~~aLVVasD~~~--y~~~~--------~~~t~GdGA~A~Ll~~~~~~~~~~---~~~~~~~~~~ 189 (465)
||.+|..+|++|.. ++||||++|.++ +.++. ...+|||||+|+||++++...+.. .+.+..
T Consensus 175 al~~A~~~i~~g~~--~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~---- 248 (402)
T 1ee0_A 175 VLRLAKDLAENNKG--SRVLIVCSEITAILFHGPNENHLDSLVAQALFGDGAAALIVGSGPHLAVERPIFEIVSTD---- 248 (402)
T ss_dssp HHHHHHHHHHHSTT--CCEEEEEEECGGGGCCCCCTTCHHHHHHTTTBCCEEEEEEEESSCCTTTCCCCEEEEEEE----
T ss_pred HHHHHHHHHHcCCC--CEEEEEEEeccchhhcCCcccchhhhccceeEecceEEEEEecCCCccccCCceEEEeee----
Confidence 99999999999965 999999999874 32221 246899999999999865311100 011110
Q ss_pred ccccccCCCC----------CCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCC-CCCCceeeccCCchHHHHHHH
Q 012353 190 YDFYKPNLAS----------EYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFS-LSNADYFVFHSPYNKLVQKSF 258 (465)
Q Consensus 190 ~df~~p~~~~----------~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~did~~~~H~p~~km~~~~~ 258 (465)
....|.... .+..+ ++..++.+.+.+.+++++++++. |++ ++|| +|++||++.++++.+.
T Consensus 249 -~~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~------gl~d~~di-~~v~Hq~~~~i~~~~~ 319 (402)
T 1ee0_A 249 -QTILPDTEKAMKLHLREGGLTFQL-HRDVPLMVAKNIENAAEKALSPL------GITDWNSV-FWMVHPGGRAILDQVE 319 (402)
T ss_dssp -EEECTTCGGGEEEEEETTEECCEE-CTTHHHHHHHHHHHHHHHHHGGG------TCCCGGGS-EEEECCSSHHHHHHHH
T ss_pred -eEEcCCchHhcCceeccCceEEEe-cchHHHHHHHHHHHHHHHHHHHc------CCCccccc-eEEECCCCHHHHHHHH
Confidence 011121100 01122 55566677788888888887775 676 7888 8999999999999998
Q ss_pred HHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHH
Q 012353 259 ARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALAS 338 (465)
Q Consensus 259 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ 338 (465)
++| +++.++.+.. ..++ +++|||++||+|++|..
T Consensus 320 ~~l------------------------gl~~ek~~~s------~~~l----------------~~~GNtssAsi~~~L~~ 353 (402)
T 1ee0_A 320 RKL------------------------NLKEDKLRAS------RHVL----------------SEYGNLISACVLFIIDE 353 (402)
T ss_dssp HHT------------------------TCCTTTTHHH------HHHH----------------HHHCBCGGGHHHHHHHH
T ss_pred HHc------------------------CCChHHhHHH------HHHH----------------HhcCCchhhHHHHHHHH
Confidence 888 7887765421 0124 79999999999999999
Q ss_pred HHHhcCCCCCC--------CEEEEEEeccchheeeeEEEEeC
Q 012353 339 LIHNKHSELDG--------KRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 339 ll~~~~~~~~G--------~rill~syGsG~~~~~~~~~~~~ 372 (465)
++++ ++ ++| ++|+|++||+|++|++++++|.+
T Consensus 354 ~~~~-g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~ 393 (402)
T 1ee0_A 354 VRKR-SM-AEGKSTTGEGLDCGVLFGFGPGMTVETVVLRSVR 393 (402)
T ss_dssp HHHH-HH-HTTCSBTBTTBSEEEEEEEETTTEEEEEEEEECB
T ss_pred HHHh-cc-ccCCCCCCCCcceEEEEEecCCcEEEEEEEEEec
Confidence 9987 54 556 99999999999999999999987
No 31
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=100.00 E-value=1.6e-39 Score=325.10 Aligned_cols=303 Identities=20% Similarity=0.208 Sum_probs=245.6
Q ss_pred eEEeEEEEecCCceechHHHHHhcCCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEe
Q 012353 5 VGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (465)
Q Consensus 5 vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T 82 (465)
++|.++++|+|+.+++++++++..+.+++|+ ..||.+|++ +.++++..+|+++|++++|+++|+++++||.|+++|
T Consensus 2 ~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~~~~Gi~~r~~--~~~~~~~~~la~~a~~~al~~ag~~~~~id~vi~~~ 79 (322)
T 1ub7_A 2 SGILALGAYVPERVMTNADFEAYLDTSDEWIVTRTGIKERRV--AAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVAT 79 (322)
T ss_dssp CEEEEEEEECCSEEEEHHHHHTTSSCCHHHHHHHTCCCEEEE--CCTTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEEC
T ss_pred cEEEEEEEECCCceecHHHHHHHhCCCHHHHHHhcCceEEee--cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 6999999999999999999999988888887 467777774 467899999999999999999999999999999999
Q ss_pred ecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc-cCCCC---Cc
Q 012353 83 ETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGPA---RP 158 (465)
Q Consensus 83 ~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~~---~~ 158 (465)
+++++..|+.+.+|+..||+ ++++++++++|++++.||..|..+|++|.. +.|||+++|..+. .++.+ ..
T Consensus 80 ~~~~~~~~~~a~~v~~~lgl----~~~~~~v~~aCas~~~al~~A~~~i~~g~~--~~vlv~g~e~~s~~~~~~d~~~~~ 153 (322)
T 1ub7_A 80 NTPDALFPDTAALVQARFGL----KAFAYDLLAGCPGWIYALAQAHALVEAGLA--QKVLAVGAEALSKIIDWNDRATAV 153 (322)
T ss_dssp SSCSEEESCHHHHHHHHTTC----CCEEEEEECSTTHHHHHHHHHHHHHHTTSC--SEEEEEEEECGGGTSCTTCHHHHT
T ss_pred CCCCCCCCcHHHHHHHHhCC----CCEEEeeCccchHHHHHHHHHHHHHHcCCC--CEEEEEEechhccccChhhcccce
Confidence 99888788999999999996 478999999999999999999999999966 9999999998743 22222 35
Q ss_pred ccccceeeeeecCCCC-cccccccccccccCcccccccCCCC---------CCcccCCchhHHHHHHHHHHHHHHHHHHh
Q 012353 159 TGGAAAVVMLVGPDAP-VAFESKLRGSHMSHAYDFYKPNLAS---------EYPVVDGKLSQTCYLMALDTCYKCLCSKY 228 (465)
Q Consensus 159 t~GdGA~A~Ll~~~~~-~~~~~~~~~~~~~~~~df~~p~~~~---------~~p~~dg~~s~~~y~~~~~~~~~~~~~~~ 228 (465)
+|||||+|+||++.+. ..+......++......++.|.+++ .|..++|+..++.+.+.+.+++++++++.
T Consensus 154 ~~GdGA~A~vL~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~a 233 (322)
T 1ub7_A 154 LFGDGGGAAVVGKVREGYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKA 233 (322)
T ss_dssp TBCCEEEEEEEECCCTTCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeccccEEEEEEecCCCCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHHc
Confidence 7999999999998743 1111001111111111123332221 23456888888888888888888888876
Q ss_pred hhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhh
Q 012353 229 EKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKP 308 (465)
Q Consensus 229 ~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~ 308 (465)
+++++|||+|++|+++.++.+.+.+.| +++.++.+. ++
T Consensus 234 ------gl~~~did~~~~H~~~~~~~d~~~~~l------------------------g~~~~~~~~---------~~--- 271 (322)
T 1ub7_A 234 ------GLTPEDIRLFVPHQANLRIIDAARERL------------------------GLPWERVAV---------NV--- 271 (322)
T ss_dssp ------TCCGGGCSEEEECCSCHHHHHHHHHTT------------------------TCCGGGBCC---------CH---
T ss_pred ------CCCHHHCCEEEEcCCCHHHHHHHHHHc------------------------CCCHHHHHH---------HH---
Confidence 799999999999999999999877666 555544321 12
Q ss_pred hhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEEe
Q 012353 309 LYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKLS 371 (465)
Q Consensus 309 ~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~~ 371 (465)
.++||+++||++++|..++++ +++++|+++++.|||+|.++++++++|.
T Consensus 272 -------------~~~Gh~~~As~~~~l~~~l~~-g~~~~g~~~l~~~~G~G~~~~~~vl~~~ 320 (322)
T 1ub7_A 272 -------------DRYGNTSTASIPLALKEAVDA-GRIREGDHVLLVSFGAGLTWAAAVLTWG 320 (322)
T ss_dssp -------------HHHCBCGGGHHHHHHHHHHHH-TSSCTTCEEEEEEEETTTEEEEEEEECC
T ss_pred -------------HhhCcHHHHHHHHHHHHHHHh-CCCCCCCEEEEEEEChhheeEEEEEEeC
Confidence 689999999999999999998 7889999999999999999999999984
No 32
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=100.00 E-value=3.9e-40 Score=340.52 Aligned_cols=305 Identities=15% Similarity=0.159 Sum_probs=236.4
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcC--C-C---------hhhh--hhhhcCeEEecCCCC------------------
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDG--A-S---------KGKY--TIGLGQECMAFCSEV------------------ 50 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g--~-~---------~~k~--~~Gig~r~~av~~~~------------------ 50 (465)
++++|.++++|+|+.+++++++++..+ . + .+|+ ++||.+|+++. ++
T Consensus 33 ~~~~I~gig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~a~--~~~~~~~~p~~~~~~~~~~~ 110 (413)
T 2p0u_A 33 GPATVLAMGKAVPANVFEQATYPDFFFNITNSNDKPALKAKFQRICDKSGIKKRHFYL--DQKILESNPAMCTYMETSLN 110 (413)
T ss_dssp SCCEEEEEEEECCSEEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHTSSCSEEEESC--CHHHHHTCGGGGSSSSSCHH
T ss_pred CCeEEEEEEeeCCCCccCHHHHHHHHHHhccccchhhhHHHHHHHHHhcCcCceeEee--ChhhhccCcccccccCCChH
Confidence 468999999999999999999998752 1 1 2355 47999998653 33
Q ss_pred -------CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCce-eEeecCcChhHHH
Q 012353 51 -------EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE-GVDSTNACYGGTA 122 (465)
Q Consensus 51 -------Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~-~~di~~aC~gg~~ 122 (465)
++..+|+++|++++|+++|+++++||.||++|+++ +..|+++.+|+..||+ ...+. +++++++|+|++.
T Consensus 111 ~r~~~~~~~~~~La~~Aa~~aL~~agl~~~dId~li~~t~~~-~~~p~~a~~v~~~LGl--~~~~~~~~~v~~aCas~~~ 187 (413)
T 2p0u_A 111 CRQEIAVAQVPKLAKEASMNAIKEWGRPKSEITHIVMATTSG-VNMPGAELATAKLLGL--RPNVRRVMMYQQGAFAGAT 187 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CCBSCHHHHHHHHHTC--CTTCEEEEEESCCTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHCCEEEEEecCC-cccCcHHHHHHHHhCC--CCCcceEeEECCccHHHHH
Confidence 68899999999999999999999999999999998 6789999999999998 45565 9999999999999
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEEeccccc--cCCCC--------CcccccceeeeeecCCCCcccccccccccccCcccc
Q 012353 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVY--AEGPA--------RPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDF 192 (465)
Q Consensus 123 AL~~A~~~l~sg~~~~~~aLVVasD~~~y--~~~~~--------~~t~GdGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df 192 (465)
||.+|..+|++|.. ++||||++|..+. .++.. ..+|||||+|+||++++...+........+. ...
T Consensus 188 AL~~A~~~i~sg~~--~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~--~~~ 263 (413)
T 2p0u_A 188 VLRVAKDLAENNAG--ARVLAICSEVTAVTFRAPSETHIDGLVGSALFGDGAAAVIVGSDPRPGIERPIYEMHWA--GEM 263 (413)
T ss_dssp HHHHHHHHHHHSTT--CEEEEEEEECSTTTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTCCCSEEEEEE--EEE
T ss_pred HHHHHHHHHHhCCC--CEEEEEEEhhcchhccCCCccChhhhcccceeecccEEEEEecCCCccccCCceEEEec--ccE
Confidence 99999999999965 9999999998743 22221 2479999999999986531111000000000 011
Q ss_pred cccCCCCCC----------cccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCC-CCCCceeeccCCchHHHHHHHHHh
Q 012353 193 YKPNLASEY----------PVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFS-LSNADYFVFHSPYNKLVQKSFARL 261 (465)
Q Consensus 193 ~~p~~~~~~----------p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~did~~~~H~p~~km~~~~~~~L 261 (465)
+.|.....+ ..+ ++..++...+.+.+++++++++. |++ .+|| +|++||++.++++.+.++|
T Consensus 264 ~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~------gl~d~~di-~~v~Hq~~~~i~~~~~~~L 335 (413)
T 2p0u_A 264 VLPESDGAIDGHLTEAGLVFHL-LKDVPGLITKNIGGFLKDTKNLV------GASSWNEL-FWAVHPGGPAILDQVEAKL 335 (413)
T ss_dssp ECTTCTTSSEEEEETTEEEEEC-CSCHHHHHHHHHHHHHHHHHHHT------TCCSGGGS-EEEECCSSHHHHHHHHHHT
T ss_pred EeCCChhhcCceEecCceEEEe-ccHHHHHHHHHHHHHHHHHHHHc------CCCCccce-EEEECCCCHHHHHHHHHHh
Confidence 223211110 112 45555666788888888888776 676 7788 8999999999999999888
Q ss_pred hhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHH
Q 012353 262 LFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIH 341 (465)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~ 341 (465)
+++.++.+.+ ..++ +++|||++||+|++|..+++
T Consensus 336 ------------------------gl~~ek~~~s------~~~l----------------~~~GNtssAsi~~~L~~~~~ 369 (413)
T 2p0u_A 336 ------------------------ELEKGKFQAS------RDIL----------------SDYGNMSSASVLFVLDRVRE 369 (413)
T ss_dssp ------------------------TCCGGGGHHH------HHHH----------------HHHCBCGGGHHHHHHHHHHH
T ss_pred ------------------------CCCHHHHHHH------HHHH----------------HHcCcchhhHHHHHHHHHHH
Confidence 7887765421 0124 79999999999999999998
Q ss_pred hcCCCCCC--------CEEEEEEeccchheeeeEEEEeC
Q 012353 342 NKHSELDG--------KRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 342 ~~~~~~~G--------~rill~syGsG~~~~~~~~~~~~ 372 (465)
+ ++ ++| ++|+|++||+|++|++++++|.+
T Consensus 370 ~-g~-~~G~~~~g~~~d~vll~~fG~G~t~~~~ll~~~~ 406 (413)
T 2p0u_A 370 R-SL-ESNKSTFGEGSEWGFLIGFGPGLTVETLLLRALP 406 (413)
T ss_dssp H-HH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred h-cc-ccCCcccCCCcceEEEEEeCccceeeeeeEEEec
Confidence 8 55 677 99999999999999999999986
No 33
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=100.00 E-value=4.8e-40 Score=336.87 Aligned_cols=309 Identities=19% Similarity=0.249 Sum_probs=222.9
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcC---CCh---------hhh--hhhhcCeEEecCCCCC-----------------
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDG---ASK---------GKY--TIGLGQECMAFCSEVE----------------- 51 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g---~~~---------~k~--~~Gig~r~~av~~~~E----------------- 51 (465)
.+++|.+|++|+|+++|+|+|+++..+ .+. .++ .+||.+|+++. ++|
T Consensus 9 ~~~~I~~ig~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~--~~e~~~~~~~~~~~~~p~~~ 86 (387)
T 3oit_A 9 GLAAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQRRYLHH--TEEMLSAHPEFVDRDAPSLD 86 (387)
T ss_dssp SCCEEEEEEEECCSEEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTSSCCEEEESC--CHHHHHHCGGGTCTTSCCHH
T ss_pred CCeEEEEEEeeCCCceecHHHHHHHHHHHhCccchHHHHHHHHHHHHhcCcceeeeec--CHHHhccCccccccCCCCHH
Confidence 469999999999999999999998752 112 134 48999999764 333
Q ss_pred --------CHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCc-eeEeecCcChhHHH
Q 012353 52 --------DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI-EGVDSTNACYGGTA 122 (465)
Q Consensus 52 --------d~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~-~~~di~~aC~gg~~ 122 (465)
+..+|+++|+++||+++|+++++||.||++|+++ +..|+++.+|+++||+ ...+ ++++++++|+|++.
T Consensus 87 ~r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~-~~~p~~a~~v~~~LGl--~~~~~~~~~~~~~C~~~~~ 163 (387)
T 3oit_A 87 ARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSG-AHVPGVDFRLVPLLGL--RPSVRRTMLHLNGCFAGCA 163 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CEESCHHHHHHHHHTC--CTTCEEEEEECCGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CCcccHHHHHHHHhCC--CCCcceeeEECchhHHHHH
Confidence 6899999999999999999999999999999999 6789999999999998 4444 38999999999999
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEEecccc--ccCCCC--------CcccccceeeeeecCCCC-c---cccccccccc---
Q 012353 123 ALFNCVNWVESSSWDGRYGLVVCTDSAV--YAEGPA--------RPTGGAAAVVMLVGPDAP-V---AFESKLRGSH--- 185 (465)
Q Consensus 123 AL~~A~~~l~sg~~~~~~aLVVasD~~~--y~~~~~--------~~t~GdGA~A~Ll~~~~~-~---~~~~~~~~~~--- 185 (465)
||.+|..+|++|.. ++||||++|.++ +.++.+ ..+|||||+|+||+++++ . .+.....++.
T Consensus 164 al~~A~~~i~sg~~--~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~~~~~~~~~p 241 (387)
T 3oit_A 164 ALRLAKDLAENSRG--ARVLVVAAELTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADADDVERPLFEIVSAAQTIIP 241 (387)
T ss_dssp HHHHHHHHHHSSTT--CEEEEEEEECGGGTCCCCCSSSCHHHHHHHHBCCEEEEEEEESSCCSSCCCCEEEEEEEEEECT
T ss_pred HHHHHHHHHhcCCC--CEEEEEEEeccchhccCccccchHhhhcccccccceEEEEEecCCCcccCCceEEEecccEEeC
Confidence 99999999999955 999999999984 333322 246999999999998752 1 0110001110
Q ss_pred -ccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc--eeeccCCchHHHHHHHHHhh
Q 012353 186 -MSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD--YFVFHSPYNKLVQKSFARLL 262 (465)
Q Consensus 186 -~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did--~~~~H~p~~km~~~~~~~L~ 262 (465)
+.+.++......+. +..++ +.......+.+.++++.++++.. .+.|++ |+| +|++||+|.+|++.+.++|
T Consensus 242 ~~~~~~~~~~~~~g~-~~~~~-~~v~~~~~~~~~~~~~~~L~~~~--~~~gl~--d~d~~~~v~Hq~n~~il~~v~~~L- 314 (387)
T 3oit_A 242 ESDHALNMRFTERRL-DGVLG-RQVPGLIGDNVERCLLDMFGPLL--GGDGGG--GWNDLFWAVHPGSSTIMDQVDAAL- 314 (387)
T ss_dssp TCTTSEEEEECSSSE-EEEEC-TTHHHHHHHHHHHHHHHHTGGGC--C--------GGGSEEEECCCCHHHHHHHHHHH-
T ss_pred CChhhccceeecCCe-EEEEC-cHHHHHHHHHHHHHHHHHHHhhc--ccCCCC--cccccEEEECCCCHHHHHHHHHHc-
Confidence 01111110000011 11122 33444445566666666654430 000454 566 9999999999999999998
Q ss_pred hhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHh
Q 012353 263 FNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHN 342 (465)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~ 342 (465)
+++.++...+ ..++ +++|||++||+|++|..+++.
T Consensus 315 -----------------------gl~~ek~~~s------~~~l----------------~~~GNtssAsip~~L~~~~~~ 349 (387)
T 3oit_A 315 -----------------------GLEPGKLAAS------RRVL----------------SDYGNMSGATVIFALDELRRQ 349 (387)
T ss_dssp -----------------------TCCTTTTHHH------HHHH----------------HHHCBCGGGHHHHHHHHHHHC
T ss_pred -----------------------CCCHHHHHHH------HHHH----------------HHhCchHHhHHHHHHHHHHHh
Confidence 8888765421 1124 899999999999999998775
Q ss_pred cCCCCCC------CEEEEEEeccchheeeeEEEEeC
Q 012353 343 KHSELDG------KRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 343 ~~~~~~G------~rill~syGsG~~~~~~~~~~~~ 372 (465)
++++| ++|+|++||+|++|+++++++.+
T Consensus 350 --~~~~G~~g~~~d~vll~~fG~G~t~~~~ll~~~~ 383 (387)
T 3oit_A 350 --RKEAAAAGEWPELGVMMAFGPGMTVDAMLLHATS 383 (387)
T ss_dssp ------------CCEEEEEEEETTTEEEEEEEEECC
T ss_pred --hhccCCCCCCCCEEEEEEecccceeeeeeeEecc
Confidence 46677 89999999999999999999876
No 34
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=100.00 E-value=2.4e-40 Score=339.57 Aligned_cols=304 Identities=17% Similarity=0.251 Sum_probs=233.6
Q ss_pred CCceeEEeEEEEecCCceechHHHHHhc-C-C-C---------hhhh--hhhhcCeEEecCCCC----------------
Q 012353 1 MAKNVGILAMDIYFPPTCVQQEALEAHD-G-A-S---------KGKY--TIGLGQECMAFCSEV---------------- 50 (465)
Q Consensus 1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~-g-~-~---------~~k~--~~Gig~r~~av~~~~---------------- 50 (465)
|.++++|.+++.|+|+.+++|+++++.. . . + .+|+ ++||.+|+++ .++
T Consensus 9 m~~~~~I~gig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~--~~~~~~~~~p~~~~~~~~~ 86 (387)
T 3a5r_A 9 MKKLATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLH--VTEEILKENPNIAAYEATS 86 (387)
T ss_dssp --CCEEEEEEEEECCSCEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTTTCCEEECS--CCHHHHHHCHHHHSSSSSC
T ss_pred cCCCcEEEEeeecCCCcccCHHHHHHHHHHhcccccchhhHHHHHHHHHhCCCCceEEe--cChhhhccCcccccccCCC
Confidence 3345899999999999999999999875 2 2 1 2355 5899999865 333
Q ss_pred ---------CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCce-eEeecCcChhH
Q 012353 51 ---------EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE-GVDSTNACYGG 120 (465)
Q Consensus 51 ---------Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~-~~di~~aC~gg 120 (465)
++..+|+++|++++|+++|+++++||.||++|+++ +..|+++.+|++.||+ ...+. +++++++|+|+
T Consensus 87 ~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl--~~~~~~~~~v~~aC~s~ 163 (387)
T 3a5r_A 87 LNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAG-VDMPGADYQLTKLLDL--DPSVKRFMFYHLGCYAG 163 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CEESCHHHHHHHHTTC--CTTCEEEEEESCCTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHcCc--CCCcceeeeEccccHHH
Confidence 68899999999999999999999999999999987 5689999999999998 44454 99999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEEEecccc--ccCCC-----C---CcccccceeeeeecCCCCccccc---cccccccc
Q 012353 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAV--YAEGP-----A---RPTGGAAAVVMLVGPDAPVAFES---KLRGSHMS 187 (465)
Q Consensus 121 ~~AL~~A~~~l~sg~~~~~~aLVVasD~~~--y~~~~-----~---~~t~GdGA~A~Ll~~~~~~~~~~---~~~~~~~~ 187 (465)
+.||.+|..+|++|.. ++||||++|..+ +.++. . ..+|||||+|+||++++...+.. .+.+..
T Consensus 164 ~~al~~A~~~i~~g~~--~~vLvvg~e~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~-- 239 (387)
T 3a5r_A 164 GTVLRLAKDIAENNKG--ARVLIVCSEMTTTCFRGPSETHLDSMIGQAILGDGAAAVIVGADPDLTVERPIFELVSTA-- 239 (387)
T ss_dssp HHHHHHHHHHHHHSTT--CEEEEEEEECCTTTCCCCCSSCCSSTTHHHHBCCEEEEEEEESSCCTTTCCCCEEEEEEE--
T ss_pred HHHHHHHHHHHHhCCC--CEEEEEEEeccchhhcCCCccchhhccccceeccceeEEEEecCCCccccCCceEEEeee--
Confidence 9999999999999965 999999999873 22221 1 24799999999999865311100 011110
Q ss_pred CcccccccCCCCC----------CcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCC-CCCCceeeccCCchHHHHH
Q 012353 188 HAYDFYKPNLASE----------YPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFS-LSNADYFVFHSPYNKLVQK 256 (465)
Q Consensus 188 ~~~df~~p~~~~~----------~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~did~~~~H~p~~km~~~ 256 (465)
....|..... +..+ ++..++...+.+.+++++++++. |++ ++|| +|++||++.++++.
T Consensus 240 ---~~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~------gl~d~~di-~~v~Hq~~~~i~~~ 308 (387)
T 3a5r_A 240 ---QTIVPESHGAIEGHLLESGLSFHL-YKTVPTLISNNIKTCLSDAFTPL------NISDWNSL-FWIAHPGGPAILDQ 308 (387)
T ss_dssp ---EEECTTCTTSEEEEEETTEEEEEE-CTTHHHHHHHHHHHHHHHHHGGG------TCCCGGGS-EEEECCSCHHHHHH
T ss_pred ---EEEeCCChHhcCceEcCCCeEEEe-cchHHHHHHHHHHHHHHHHHHhc------CCCChhhe-eEEECCCCHHHHHH
Confidence 0112221110 0112 45555666777888888877765 676 7888 89999999999999
Q ss_pred HHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHH
Q 012353 257 SFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAAL 336 (465)
Q Consensus 257 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L 336 (465)
+.++| +++.++.+.. ..++ +++|||++||+|++|
T Consensus 309 ~~~~l------------------------gl~~ek~~~s------~~~l----------------~~~GNtssAsi~~~L 342 (387)
T 3a5r_A 309 VTAKV------------------------GLEKEKLKVT------RQVL----------------KDYGNMSSATVFFIM 342 (387)
T ss_dssp HHHHH------------------------TCCGGGGHHH------HHHH----------------HHHCBCGGGHHHHHH
T ss_pred HHHHc------------------------CCChHHhHHH------HHHH----------------HhcCCcchhHHHHHH
Confidence 99888 7887765321 0124 799999999999999
Q ss_pred HHHHHhcCCCCCC--------CEEEEEEeccchheeeeEEEEeC
Q 012353 337 ASLIHNKHSELDG--------KRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 337 ~~ll~~~~~~~~G--------~rill~syGsG~~~~~~~~~~~~ 372 (465)
..++++ ++ ++| ++|+|++||+|++|++++++|.+
T Consensus 343 ~~~~~~-g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~ 384 (387)
T 3a5r_A 343 DEMRKK-SL-ENGQATTGEGLEWGVLFGFGPGITVETVVLRSVP 384 (387)
T ss_dssp HHHHHH-HH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred HHHHHh-cc-ccCCCCCCCCcceEEEEEecCcceeeehhheecc
Confidence 999987 55 566 99999999999999999999986
No 35
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=100.00 E-value=3.7e-40 Score=338.36 Aligned_cols=306 Identities=16% Similarity=0.180 Sum_probs=235.5
Q ss_pred CceeEEeEEEEecCCceechHHHHHhcC--C--C--------hhhh--hhhhcCeEEecCCCC-----------------
Q 012353 2 AKNVGILAMDIYFPPTCVQQEALEAHDG--A--S--------KGKY--TIGLGQECMAFCSEV----------------- 50 (465)
Q Consensus 2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~g--~--~--------~~k~--~~Gig~r~~av~~~~----------------- 50 (465)
+++++|.+++.|+|+.+++++++++..+ . + .+|+ ++||.+|+++ .++
T Consensus 14 ~~~~~I~g~g~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~--~~~~~~~~~p~~~~~~~~~~ 91 (389)
T 1i88_A 14 EGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMY--LTEEILKENPNVCEYMAPSL 91 (389)
T ss_dssp CSCCEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHHSCCCEEECS--CCHHHHHHCHHHHSSSCSCH
T ss_pred CCCeEEEEEEeeCCCcccCHHHHHHHHHHhcccccchhHHHHHHHHHHhCCCCceeee--cChhhhccCcchhcccCCCh
Confidence 3578999999999999999999998742 1 1 2355 4799998865 333
Q ss_pred --------CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCce-eEeecCcChhHH
Q 012353 51 --------EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE-GVDSTNACYGGT 121 (465)
Q Consensus 51 --------Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~-~~di~~aC~gg~ 121 (465)
++..+|+++|++++|+++|+++++||.||++|+++ +..|+++.+|++.||+ ...+. +++++++|+|++
T Consensus 92 ~~r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl--~~~~~~~~~v~~aC~~~~ 168 (389)
T 1i88_A 92 DARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSG-VDMPGADYQLTKLLGL--RPYVKRYMMYQQGAFAGG 168 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTC--CTTCEEEEEESCCTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCC-CCCchHHHHHHHHcCc--CCCchhheeECCccHHHH
Confidence 68899999999999999999999999999999998 6789999999999998 44565 899999999999
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEEEeccccc--cCCCC--------CcccccceeeeeecCCCCcccccccccccccCccc
Q 012353 122 AALFNCVNWVESSSWDGRYGLVVCTDSAVY--AEGPA--------RPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYD 191 (465)
Q Consensus 122 ~AL~~A~~~l~sg~~~~~~aLVVasD~~~y--~~~~~--------~~t~GdGA~A~Ll~~~~~~~~~~~~~~~~~~~~~d 191 (465)
.||.+|..+|++|.. ++||||++|..+. .++.+ ..+|||||+|+||++.+...+........+. ..
T Consensus 169 ~al~~A~~~i~~g~~--~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~--~~ 244 (389)
T 1i88_A 169 TVLRLAKDLAENNKG--ARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWT--AQ 244 (389)
T ss_dssp HHHHHHHHHHHTSTT--CEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTSCCCEEEEEE--EE
T ss_pred HHHHHHHHHHHcCCC--CEEEEEEEecccHhHcCccccccccccccceEecceEEEEEecCCCCccCCCceEEEee--ee
Confidence 999999999999965 9999999998743 23221 2479999999999986531111000000000 01
Q ss_pred ccccCCCCC----------CcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCC-CCCCceeeccCCchHHHHHHHHH
Q 012353 192 FYKPNLASE----------YPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFS-LSNADYFVFHSPYNKLVQKSFAR 260 (465)
Q Consensus 192 f~~p~~~~~----------~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~did~~~~H~p~~km~~~~~~~ 260 (465)
...|..... +..+ |+..++...+.+.+++++++++. |++ .+|+ +|++||++.++++.+.++
T Consensus 245 ~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~------gl~d~~di-~~v~Hq~~~~i~~~~~~~ 316 (389)
T 1i88_A 245 TIAPDSEGAIDVHLREAGLTFHL-LKDVPGIVSKNITKALVEAFEPL------GISDYNSI-FWIAHPGGPAILDQVEQK 316 (389)
T ss_dssp EECTTCTTSEEEEEETTEEEEEE-CSCHHHHHHHHHHHHHHHHHGGG------TCCCTTSS-EEEECCSCHHHHHHHHHH
T ss_pred EEcCCCcccceeEEecCceEEEe-ccHHHHHHHHHHHHHHHHHHHhc------CCCchhhc-eEEECCCcHHHHHHHHHH
Confidence 122221110 1112 45555666777888888777765 676 7888 899999999999999998
Q ss_pred hhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHH
Q 012353 261 LLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLI 340 (465)
Q Consensus 261 L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll 340 (465)
| +++.++.+..+ .++ +++|||++||+|++|..++
T Consensus 317 l------------------------gl~~ek~~~~~------~~l----------------~~~GNtssAsi~~~L~~~~ 350 (389)
T 1i88_A 317 L------------------------ALKPEKMNATR------EVL----------------SEYGNMSSACVLFILDEMR 350 (389)
T ss_dssp H------------------------TCCGGGGHHHH------HHH----------------HHHCBCGGGHHHHHHHHHH
T ss_pred c------------------------CCCHHHHHHHH------HHH----------------HHhCCchhhHHHHHHHHHH
Confidence 8 88877654210 124 7999999999999999999
Q ss_pred HhcCCCCCC--------CEEEEEEeccchheeeeEEEEeC
Q 012353 341 HNKHSELDG--------KRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 341 ~~~~~~~~G--------~rill~syGsG~~~~~~~~~~~~ 372 (465)
++ ++ ++| ++|+|++||+|++|++++++|.+
T Consensus 351 ~~-g~-~~G~~~~g~~~d~vll~~fG~G~t~~~~ll~~~~ 388 (389)
T 1i88_A 351 KK-ST-QNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVA 388 (389)
T ss_dssp HH-HH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred Hh-cc-ccCCcccCCCCceEEEEEecCccEEEEEEEEecC
Confidence 88 55 677 99999999999999999999976
No 36
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=100.00 E-value=1.1e-39 Score=335.98 Aligned_cols=302 Identities=16% Similarity=0.170 Sum_probs=234.9
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcC--C-C---------hhhh--hhhhcCeEEecCCCC------------------
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDG--A-S---------KGKY--TIGLGQECMAFCSEV------------------ 50 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g--~-~---------~~k~--~~Gig~r~~av~~~~------------------ 50 (465)
.+++|.++++|+|+.+++++++++..+ . + .+|+ ++||.+|+++. ++
T Consensus 28 ~~~~I~g~g~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~a~--~~~~~~~~p~~~~~~~~~~~ 105 (402)
T 3awk_A 28 GPATILAIGTSNPTNIFEQSTYPDFFFDVTNCNDKTELKKKFQRICDKSGIKKRHFHL--TDEILRKNPSICKFKEASLD 105 (402)
T ss_dssp SCEEEEEEEEECCSEEEESTTHHHHHHHHTTCTTCHHHHHHHHHHHHHSSCSEEEESC--CHHHHHHSGGGGSSSSSCHH
T ss_pred CCeEEEEEEecCCCCccCHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCcCceEEee--ChhhhccCcccccccCCChH
Confidence 568999999999999999999988742 1 1 2345 47999998653 33
Q ss_pred -------CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCce-eEeecCcChhHHH
Q 012353 51 -------EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE-GVDSTNACYGGTA 122 (465)
Q Consensus 51 -------Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~-~~di~~aC~gg~~ 122 (465)
++..+|+++|++++|+++|+++++||.||++|+++ +..|+++.+|++.||+ ...+. +++++++|+|++.
T Consensus 106 ~r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl--~~~~~~~~~v~~aC~s~~~ 182 (402)
T 3awk_A 106 PRQDIAVLEVPKLAKEAAISAIKQWGQPKSKITHLVFATTSG-VDMPGADFQLAKLLGL--RPTVKRVMLYQQGAYAGAT 182 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEECSC-CCSSCHHHHHHHHHTC--CTTCEEEEEESCGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CcCChHHHHHHHHcCC--CCccceeeEECCccHHHHH
Confidence 68899999999999999999999999999999998 6789999999999998 44565 8999999999999
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEEeccccc--cCCCC--------CcccccceeeeeecCCCCccccc---ccccccccCc
Q 012353 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVY--AEGPA--------RPTGGAAAVVMLVGPDAPVAFES---KLRGSHMSHA 189 (465)
Q Consensus 123 AL~~A~~~l~sg~~~~~~aLVVasD~~~y--~~~~~--------~~t~GdGA~A~Ll~~~~~~~~~~---~~~~~~~~~~ 189 (465)
||.+|..+|++|.. ++||||++|..+. .++.+ ..+|||||+|+||++++...+.. .+.+..
T Consensus 183 al~~A~~~i~sg~~--~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~---- 256 (402)
T 3awk_A 183 VLRVAKDLAENNKG--ARVLVACSEVTAVTFRAPSETHLDGLVGSALFGDGAAALIVGSDPVPQEEKPLFEIHWAG---- 256 (402)
T ss_dssp HHHHHHHHHHTSTT--CEEEEEEEECTTTTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTCCCCEEEEEEE----
T ss_pred HHHHHHHHHHcCCC--CEEEEEEEeccchhhcCCCccCHHHhhccccccCceEEEEEecCCCccccCCceEEEeee----
Confidence 99999999999965 9999999998743 23222 24799999999999865311100 011100
Q ss_pred ccccccCCCCC----------CcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCC-CCCCceeeccCCchHHHHHHH
Q 012353 190 YDFYKPNLASE----------YPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFS-LSNADYFVFHSPYNKLVQKSF 258 (465)
Q Consensus 190 ~df~~p~~~~~----------~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~did~~~~H~p~~km~~~~~ 258 (465)
....|..... +..+ ++..++...+.+.+++++++++. |++ .+|+ +|++||++.++++.+.
T Consensus 257 -~~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~------gl~d~~di-~~v~Hq~~~~i~~~~~ 327 (402)
T 3awk_A 257 -EAVLPDSDGAINGHLREAGLIFHL-LKDVPGLISKNIDKVLAEPLEYV------HFPSYNDM-FWAVHPGGPAILDQIE 327 (402)
T ss_dssp -EEECTTCTTSEEEEEETTEEEEEE-CTTHHHHHHHHHHHHTHHHHHHT------TCCCGGGE-EEEECCSCHHHHHHHH
T ss_pred -EEeeCCCchhcceEEecCceEEEe-CchHHHHHHHHHHHHHHHHHHhc------CCCCccce-eEEECCCcHHHHHHHH
Confidence 1112221100 1112 45556666778888888887776 665 6777 7999999999999998
Q ss_pred HHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHH
Q 012353 259 ARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALAS 338 (465)
Q Consensus 259 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ 338 (465)
++| +++.++.+.++ .++ +++|||++||+|++|..
T Consensus 328 ~~l------------------------gl~~ek~~~s~------~~l----------------~~~GNtssAsi~~~L~~ 361 (402)
T 3awk_A 328 AKL------------------------GLSTDKMQASR------DVL----------------ASYGNMSSASVLFVLDQ 361 (402)
T ss_dssp HHT------------------------TCCTTTTHHHH------HHH----------------HHHCBCGGGHHHHHHHH
T ss_pred HHc------------------------CCCHHHHHHHH------HHH----------------HHcCCchhhHHHHHHHH
Confidence 888 88887654210 124 79999999999999999
Q ss_pred HHHhcCCCCCC--------CEEEEEEeccchheeeeEEEEeC
Q 012353 339 LIHNKHSELDG--------KRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 339 ll~~~~~~~~G--------~rill~syGsG~~~~~~~~~~~~ 372 (465)
++++ ++ ++| ++|+|++||+|++|+++++++.+
T Consensus 362 ~~~~-g~-~~G~~~~g~g~d~vll~~fG~G~t~~~~ll~~~~ 401 (402)
T 3awk_A 362 IRKN-SE-ELHLPTTGEGFEWGFVIGFGPGLTVETLLLRSIN 401 (402)
T ss_dssp HHHH-HH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred HHhh-cc-ccCCCcCCCCcceEEEEEecccceeeeheeeecc
Confidence 9988 55 677 99999999999999999999864
No 37
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=100.00 E-value=2.2e-39 Score=330.82 Aligned_cols=305 Identities=14% Similarity=0.168 Sum_probs=233.2
Q ss_pred ceeEEeEEEEecCCceechHHHHHhcC--C--C------hhhh--hhhhcCeEEecCCCC--------------------
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHDG--A--S------KGKY--TIGLGQECMAFCSEV-------------------- 50 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~g--~--~------~~k~--~~Gig~r~~av~~~~-------------------- 50 (465)
++++|.++++|+|+.+++++++++..+ . + .+++ ++||++|+++ .++
T Consensus 12 ~~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~--~~~~~~~~~~~~~~~~~~~~~~~ 89 (374)
T 2h84_A 12 NNSFVLGIGISVPGEPISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTRHLV--RDYTKPENSIKFRHLETITDVNN 89 (374)
T ss_dssp CCCEEEEEEEECSSSCEEHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCCCEECCS--SCTTSGGGCGGGGGGCCHHHHHH
T ss_pred CCeEEEEEEEeCCCcccCHHHHHHHHHHhhccChHHHHHHHHHHHhCCcCcceee--cCccccccccccCChHHHHHHHH
Confidence 569999999999999999999998753 2 1 1334 4799988865 344
Q ss_pred ---CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec-CcChhHHHHHHH
Q 012353 51 ---EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFN 126 (465)
Q Consensus 51 ---Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~-~aC~gg~~AL~~ 126 (465)
++..+|+++|++++|+++|+++++||.||++|+++ +..|+++.+|+..||+ ...+.++++. ++|+|++.||.+
T Consensus 90 ~~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~-~~~p~~a~~v~~~lGl--~~~~~~~~v~~~aCss~~~al~~ 166 (374)
T 2h84_A 90 QFKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTG-IIIPDVNFKLIDLLGL--NKDVERVSLNLMGCLAGLSSLRT 166 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTC--CTTCEEEEEESCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CCCCcHHHHHHHHcCc--CCCCceEEecCCcCHHHHHHHHH
Confidence 77899999999999999999999999999999987 5689999999999998 4458999997 899999999999
Q ss_pred HHHHHHcCCCCCCEEEEEEeccccc-c-CCCCC------cccccceeeeeecCCCCc---c-cccccccccc-cCcccc-
Q 012353 127 CVNWVESSSWDGRYGLVVCTDSAVY-A-EGPAR------PTGGAAAVVMLVGPDAPV---A-FESKLRGSHM-SHAYDF- 192 (465)
Q Consensus 127 A~~~l~sg~~~~~~aLVVasD~~~y-~-~~~~~------~t~GdGA~A~Ll~~~~~~---~-~~~~~~~~~~-~~~~df- 192 (465)
|..+|++|.. ++||||++|..+. . ++.++ .+|||||+|+||++.+.. . +.....++.. .+..+.
T Consensus 167 A~~~i~~g~~--~~vLv~g~e~~s~~~~~~~dr~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 244 (374)
T 2h84_A 167 AASLAKASPR--NRILVVCTEVCSLHFSNTDGGDQMVASSIFADGSAAYIIGCNPRIEETPLYEVMCSINRSFPNTENAM 244 (374)
T ss_dssp HHHHHTTCTT--CEEEEEEEECCGGGCCCSSSHHHHHHHHHBCCEEEEEEEESSCCTTCCCCEEEEEEEEEECSSCTTSE
T ss_pred HHHHHHcCCC--CEEEEEEEEecchhhcCCCCHHHHhhhhhhccCcEEEEEecCCCcccCCceeEEeeeeEEeCCCcccc
Confidence 9999999966 9999999998743 2 33332 579999999999986531 0 1110111110 000000
Q ss_pred -cccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCC------CCCCCCceeeccCCchHHHHHHHHHhhhhh
Q 012353 193 -YKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQ------FSLSNADYFVFHSPYNKLVQKSFARLLFND 265 (465)
Q Consensus 193 -~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~------~~~~did~~~~H~p~~km~~~~~~~L~~~~ 265 (465)
|.+.. ..+....++.......+.+.++++.++++. | ++++|||+| +||++.++++.+.++|
T Consensus 245 ~~~~~~-~g~~~~~~~~v~~~~~~~~~~~i~~~L~~a------g~~~~~~l~~~did~~-~H~~~~~i~d~~~~~l---- 312 (374)
T 2h84_A 245 VWDLEK-EGWNLGLDASIPIVIGSGIEAFVDTLLDKA------KLQTSTAISAKDCEFL-IHTGGKSILMNIENSL---- 312 (374)
T ss_dssp EEEEET-TEEEEEECTTHHHHHHHHHHHHHHHHHHHH------TTTSCSCCCSSSSEEE-ECCCCHHHHHHHHHHT----
T ss_pred eeEEec-CcEEEEeCchHHHHHHHHHHHHHHHHHHhc------CCccccCCChhhcCEe-ECCCCHHHHHHHHHHc----
Confidence 11110 000111334444555577777888887776 7 899999999 9999999999998887
Q ss_pred hcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCC
Q 012353 266 FMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHS 345 (465)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~ 345 (465)
|++.++...+ ..++ +++||+++||+|++|.+++++ ++
T Consensus 313 --------------------gl~~~k~~~s------~~~~----------------~~~Gnt~sasi~~~L~~~~~~-~~ 349 (374)
T 2h84_A 313 --------------------GIDPKQTKNT------WDVY----------------HAYGNMSSASVIFVMDHARKS-KS 349 (374)
T ss_dssp --------------------TCCGGGGHHH------HHHH----------------HHHCBCTTHHHHHHHHHHHTC-SC
T ss_pred --------------------CCCHHHHHHH------HHHH----------------HHhCCchhhHHHHHHHHHHhh-cC
Confidence 7777654310 1123 799999999999999999988 55
Q ss_pred CCCCCEEEEEEeccchheeeeEEEEe
Q 012353 346 ELDGKRVVLFSYGSGLTATMFSLKLS 371 (465)
Q Consensus 346 ~~~G~rill~syGsG~~~~~~~~~~~ 371 (465)
+|++|++++||+|++|++++++|.
T Consensus 350 --~Gd~vll~~~G~G~t~~~~ll~~~ 373 (374)
T 2h84_A 350 --LPTYSISLAFGPGLAFEGCFLKNV 373 (374)
T ss_dssp --CCSEEEEEEEETTTEEEEEEEEEC
T ss_pred --CCCeEEEEEeccchhhhhhhheec
Confidence 899999999999999999999985
No 38
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=100.00 E-value=2.7e-39 Score=332.79 Aligned_cols=308 Identities=15% Similarity=0.096 Sum_probs=231.9
Q ss_pred CceeEEeEEEEecCCceechHHHHHhcC----CCh--hh---h--hhhhcCeEEecCCC---------------------
Q 012353 2 AKNVGILAMDIYFPPTCVQQEALEAHDG----ASK--GK---Y--TIGLGQECMAFCSE--------------------- 49 (465)
Q Consensus 2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~g----~~~--~k---~--~~Gig~r~~av~~~--------------------- 49 (465)
+|.+.|.+|++++|++.++|+++.++.+ .++ .+ + ++||.+|++.++.+
T Consensus 24 ~m~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 103 (413)
T 3v7i_A 24 AMAAYLCAPAVIHGEHSVETREIVEEVRGRHPHAPWAPRIDGIAASTGIESRGWMLPLEAAVAPGGGGDLGAAREALVRD 103 (413)
T ss_dssp CCCEEEECCEEEECSEEEEHHHHHHHHHHHCSSCSSGGGHHHHHHHHTCSEEEESSCHHHHHSCCCCCCCHHHHHHC---
T ss_pred CCCeEEEeeEeeCCCcccCHHHHHHHHHHhcccchhHHHHHHHHHhCCcCeeeeecCHHHhccccccccccccccccccc
Confidence 4679999999999999999999887652 111 22 2 47999999876521
Q ss_pred ------------------------------CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHH
Q 012353 50 ------------------------------VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQI 99 (465)
Q Consensus 50 ------------------------------~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~ 99 (465)
.+++.+|+++|+++||+++|+++++||.||++|+++ +..|+++.+|+.+
T Consensus 104 ~~~n~~l~~~~~~~e~i~~rtgi~~R~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~-~~~P~~a~~v~~~ 182 (413)
T 3v7i_A 104 GFTEQDANRAIAALKAVPASQTVQERTAPAWEAVQAYGERAARGALQIAGLDVADVDCLITSNSTT-PALPGLDVALANR 182 (413)
T ss_dssp ---CHHHHHHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSS-CCSSCHHHHHHHH
T ss_pred ccchhhhhhhcCcccceecCCCHHHhCcccccCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCC-CCcCHHHHHHHHH
Confidence 135678999999999999999999999999999998 5689999999999
Q ss_pred hcccCCCCceeEee-cCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc-cCCCC--------Ccccccceeeeee
Q 012353 100 FEKFGNTDIEGVDS-TNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-AEGPA--------RPTGGAAAVVMLV 169 (465)
Q Consensus 100 LGl~g~~~~~~~di-~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-~~~~~--------~~t~GdGA~A~Ll 169 (465)
||+ .+++.++++ +++|+||+.||.+|..+|++|.. ++||||++|.++. .++.+ ..+|||||+|+||
T Consensus 183 LGl--~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~--~~vLvvg~E~~S~~~~~~d~~~~~lv~~~LFGDGAaAvvl 258 (413)
T 3v7i_A 183 LPL--RGDTMLLPATQWACVAGTRSLALAADLVAADPD--RVVLVVISEALSTTYQPADDTLESLIVRLLFADTAVAAVV 258 (413)
T ss_dssp TTC--CTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTT--CEEEEEEEECGGGGCCSSCCSTTHHHHHHHBCCEEEEEEE
T ss_pred hCC--CCCceEEEeeCCccHHHHHHHHHHHHHHhcCCC--CEEEEEEEeccccccCccccchhhhhcceeeccccEEEEE
Confidence 998 566899999 89999999999999999999954 9999999999842 22222 3579999999999
Q ss_pred cCCCC--cccccccccccccCccc-----ccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 012353 170 GPDAP--VAFESKLRGSHMSHAYD-----FYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD 242 (465)
Q Consensus 170 ~~~~~--~~~~~~~~~~~~~~~~d-----f~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did 242 (465)
++++. ..+. +.++......+ -|.......+..++|+. . .+++.+.+++++++++......++++ ||
T Consensus 259 ~~~~~~~~~~~--l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v-~-~~v~~~~~~i~~~L~~~~~~~~~gl~---id 331 (413)
T 3v7i_A 259 TGRPRPESVLR--LDAAWHHTLPGTRDLHRLETRADGTHFVMDRRG-P-RAVQETVTAMWEWLRVRYEDDPSSWH---PD 331 (413)
T ss_dssp ESSCCTTEEEE--EEEEEEEECTTCTTSEEEEEETTEEEEEECTTH-H-HHHHHHHHHHHHHHHHHTSSSCTTCC---CC
T ss_pred EecCCCCCCEE--EEccccEEeCCCccccCccccCCceEEEECcHH-H-HHHHHHHHHHHHHHhhccccccCCCc---ee
Confidence 98763 1121 11221110000 01100000012356652 2 34556777777777621100123565 99
Q ss_pred eeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCC--CCCCccccchhHHHHHHhhhhhhhhhccCCCccc
Q 012353 243 YFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFST--LSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLI 320 (465)
Q Consensus 243 ~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~ 320 (465)
+|++||++.++++.+.++| + ++.++.. ..+.++
T Consensus 332 ~~v~Hq~~~~il~~v~~~L------------------------g~~l~~ek~~------~s~~~l--------------- 366 (413)
T 3v7i_A 332 VLLAHPGGTRVLEYMEQTM------------------------PDEWPSGLLS------YSRDSY--------------- 366 (413)
T ss_dssp EEEEECSSHHHHHHHHHHS------------------------CSSCCSCSTH------HHHHHH---------------
T ss_pred EEEECCCChHHHHHHHHHh------------------------CCCCCHHHhh------ccceEe---------------
Confidence 9999999999999999988 7 8887641 112345
Q ss_pred ccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchheeeeEEEE
Q 012353 321 PKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTATMFSLKL 370 (465)
Q Consensus 321 ~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~~~~~~~ 370 (465)
+ +|||++||+|++|..++ + +++++|++|+|++||+|++|++++++|
T Consensus 367 -~-~GNtssAsi~~~L~~~~-~-~~~~~Gd~vll~~fG~Glt~~~~ll~w 412 (413)
T 3v7i_A 367 -T-SGNRGGAAVFDILRRAH-D-AGQKTGSRAVLYAAAPGLTATALEGEW 412 (413)
T ss_dssp -T-TCBCGGGHHHHHHHHHH-H-HCCCTTCEEEEEEEETTTEEEEEEEEE
T ss_pred -c-eeChHHHHHHHHHHHHH-h-CCCCCCCEEEEEEECHHHhHhhhheEe
Confidence 8 99999999999999999 4 578899999999999999999999998
No 39
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=100.00 E-value=5.1e-39 Score=332.17 Aligned_cols=305 Identities=17% Similarity=0.223 Sum_probs=233.7
Q ss_pred CceeEEeEEEEecCCceechHHHHHhcCC---C---------hhhh--hhhhcCeEEecCC---------------CC--
Q 012353 2 AKNVGILAMDIYFPPTCVQQEALEAHDGA---S---------KGKY--TIGLGQECMAFCS---------------EV-- 50 (465)
Q Consensus 2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~g~---~---------~~k~--~~Gig~r~~av~~---------------~~-- 50 (465)
+++++|.++++|+|+.+|+|+++++..+. + .+|+ ++||.+|+++.++ +.
T Consensus 36 ~~~~~I~gig~~lP~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~a~~~~~~~~~p~~~~~~~~~~~~ 115 (413)
T 1xes_A 36 DGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLD 115 (413)
T ss_dssp CSCEEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHTSCCCEEECSCCHHHHHTCHHHHSSSSSCCHH
T ss_pred CCCeEEEEEeecCCCCccCHHHHHHHHHHhccccchhhhHHHHHHHHhhcCcCceEEeeChhhhccCccccccccCCCHH
Confidence 45789999999999999999999987521 1 1344 4799999865322 00
Q ss_pred -------CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCc-eeEeecCcChhHHH
Q 012353 51 -------EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI-EGVDSTNACYGGTA 122 (465)
Q Consensus 51 -------Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~-~~~di~~aC~gg~~ 122 (465)
++..+|+++|+++||+++|+++++||.||++|+++ +..|+++.+|+..||+ ...+ ++++++++|+|++.
T Consensus 116 ~r~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl--~~~~~~~~~v~~aCas~~~ 192 (413)
T 1xes_A 116 ARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTT-PDLPGADFEVAKLLGL--HPSVKRVGVFQHGCFAGGT 192 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCC-CEESCHHHHHHHHHTC--CTTCEEEEEESCCTTHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccchHHHHHHHHcCc--CCccchhceecCccHHHHH
Confidence 47899999999999999999999999999999998 5689999999999998 4445 49999999999999
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEEecccc--ccCCCC--------CcccccceeeeeecCCCCccccc---ccccccccCc
Q 012353 123 ALFNCVNWVESSSWDGRYGLVVCTDSAV--YAEGPA--------RPTGGAAAVVMLVGPDAPVAFES---KLRGSHMSHA 189 (465)
Q Consensus 123 AL~~A~~~l~sg~~~~~~aLVVasD~~~--y~~~~~--------~~t~GdGA~A~Ll~~~~~~~~~~---~~~~~~~~~~ 189 (465)
||.+|..+|++|.. ++||||++|..+ +.++.. ..+|||||+|+||++.+...+.. .+.+..
T Consensus 193 AL~~A~~~i~~G~~--~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~---- 266 (413)
T 1xes_A 193 VLRMAKDLAENNRG--ARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTA---- 266 (413)
T ss_dssp HHHHHHHHHHTSTT--CCEEEEEEECTTTTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTSCCSEEEEEEE----
T ss_pred HHHHHHHHHHcCCC--CEEEEEEehhhhhhhcCCCccchhhcccceeEecccEEEEEecCCCccccCCceEEEeee----
Confidence 99999999999965 999999999874 322221 24799999999999865311100 011110
Q ss_pred ccccccCCCCC----------CcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCC-CCCCceeeccCCchHHHHHHH
Q 012353 190 YDFYKPNLASE----------YPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFS-LSNADYFVFHSPYNKLVQKSF 258 (465)
Q Consensus 190 ~df~~p~~~~~----------~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~did~~~~H~p~~km~~~~~ 258 (465)
....|..... +..+ ++..+..+.+.+.+++++++++. |++ ++|+ +|++||++.++++.+.
T Consensus 267 -~~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~------gl~d~~di-~~v~Hq~~~~i~~~~~ 337 (413)
T 1xes_A 267 -QTVVPNSEGAIGGKVREVGLTFQL-KGAVPDLISANIENCMVEAFSQF------KISDWNKL-FWVVHPGGRAILDRVE 337 (413)
T ss_dssp -EEECTTCTTTEEEEEETTEEEEEE-CTTHHHHHHHHHHHHHHHHHGGG------TCCCGGGS-EEEECCSCHHHHHHHH
T ss_pred -eEEcCCChhhcCcEEecCceEEEe-cccHHHHHHHHHHHHHHHHHHhc------CCCCccce-eEEECCCCHHHHHHHH
Confidence 0112221100 0112 45555666677888887777765 676 7788 7999999999999999
Q ss_pred HHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHH
Q 012353 259 ARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALAS 338 (465)
Q Consensus 259 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ 338 (465)
++| +++.++.+.. ..++ +++|||++||+|++|..
T Consensus 338 ~~L------------------------gl~~ek~~~s------~~~l----------------~~~GNtssAsi~~~L~~ 371 (413)
T 1xes_A 338 AKL------------------------NLDPTKLIPT------RHVM----------------SEYGNMSSACVHFILDQ 371 (413)
T ss_dssp HHT------------------------TCCTTTTHHH------HHHH----------------HHHCBCGGGHHHHHHHH
T ss_pred HHc------------------------CCChHHhHHH------HHHH----------------HhcCcCchhhHHHHHHH
Confidence 888 8888765421 1134 79999999999999999
Q ss_pred HHHhcCCCCCC--------CEEEEEEeccchheeeeEEEEeC
Q 012353 339 LIHNKHSELDG--------KRVVLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 339 ll~~~~~~~~G--------~rill~syGsG~~~~~~~~~~~~ 372 (465)
++++ ++ ++| ++|+|++||+|++|++++++|.+
T Consensus 372 ~~~~-g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~ 411 (413)
T 1xes_A 372 TRKA-SL-QNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVP 411 (413)
T ss_dssp HHHH-HH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred HHHh-cc-ccCCCCCCCCcceEEEEEecCCcEEeEEEEEecc
Confidence 9987 54 556 99999999999999999999986
No 40
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=100.00 E-value=4.1e-38 Score=358.21 Aligned_cols=310 Identities=18% Similarity=0.179 Sum_probs=233.8
Q ss_pred CceeEEeEEEEecCCceechHHHHHh---cCCChhh---------h--hhhhcCeEEecCCCCC----------------
Q 012353 2 AKNVGILAMDIYFPPTCVQQEALEAH---DGASKGK---------Y--TIGLGQECMAFCSEVE---------------- 51 (465)
Q Consensus 2 ~~~vgI~~i~~y~P~~~v~~~~l~~~---~g~~~~k---------~--~~Gig~r~~av~~~~E---------------- 51 (465)
.++++|.++|+|+|+.+|+|+|+++. .+.++.| + ++||.+|++. .++|
T Consensus 601 ~~~~~I~g~g~~~P~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~sGI~~r~~~--~~~~~~~~~~~~~~~~~~~~ 678 (979)
T 3tsy_A 601 KGPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIH--LTEEMLEEHPNIGAYMAPSL 678 (979)
T ss_dssp CSCEEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECS--CCHHHHHHCHHHHSSSSCCH
T ss_pred cCCceeecccCCCCCCccCHHHHHHHHHHhccccchHHHHHHHHHHHHhcCcceeeEe--cChhhhhcCcccccccCCCH
Confidence 45799999999999999999999998 5666644 4 4789888854 4444
Q ss_pred ---------CHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHH
Q 012353 52 ---------DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122 (465)
Q Consensus 52 ---------d~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~ 122 (465)
+..+||++|+++||+++|+++++||.||++|++ ++..|++++.|+++||+. ...+.++|+++||+||+.
T Consensus 679 ~~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~-~~~~p~~a~~v~~~lGl~-~~~~~~~~v~~aCsg~~~ 756 (979)
T 3tsy_A 679 NIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTS-GVEMPGADYKLANLLGLE-PSVRRVMLYHQGCYAGGT 756 (979)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESS-CCCSSCHHHHHHHHHTCC-TTCEEEEEESCCTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeC-CCCCCcHHHHHHHHcCCC-cccEEEeeeccccHhHHH
Confidence 478899999999999999999999999999955 567899999999999982 123679999999999999
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEEeccccccC--CCC--------CcccccceeeeeecCCCCcccccccccccccCcccc
Q 012353 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAE--GPA--------RPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDF 192 (465)
Q Consensus 123 AL~~A~~~l~sg~~~~~~aLVVasD~~~y~~--~~~--------~~t~GdGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df 192 (465)
||.+|..+|++|.+ ++||||++|...... ... ..+|||||+|+||++.+...+..............+
T Consensus 757 Al~~A~~~i~sG~~--~~vLvvg~e~~~~~~~~~~~~~~~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~ 834 (979)
T 3tsy_A 757 VLRTAKDLAENNAG--ARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFI 834 (979)
T ss_dssp HHHHHHHHHHTSTT--CEEEEEEEECTTTTCCCCCSSCHHHHHHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEEC
T ss_pred HHHHHHHHHHhCCC--CEEEEEEEEecchheeCCCccCHHHHhhhhhccCceEEEEEecCCCccccCcceEEEeeeeEEe
Confidence 99999999999966 999999999874422 111 146899999999998653211100000000000001
Q ss_pred cccCC-------CCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhh
Q 012353 193 YKPNL-------ASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFND 265 (465)
Q Consensus 193 ~~p~~-------~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~ 265 (465)
..+.. ...+..+.++.......+.+.++++..+++. |++++|||+|++||++.++++++.++|
T Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~a------gl~~~did~~~~Hq~~~~i~~~~~~~l---- 904 (979)
T 3tsy_A 835 PNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPL------GISDWNSLFWIAHPGGPAILDAVEAKL---- 904 (979)
T ss_dssp TTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGG------TCCCGGGSEEEECCSCHHHHHHHHHHH----
T ss_pred cCchhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhc------CCCCcccceEEECCCChHHHHHHHHHc----
Confidence 11110 0011123344455555666777777766655 899999999999999999999999998
Q ss_pred hcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCC
Q 012353 266 FMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHS 345 (465)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~ 345 (465)
+++.++.+.+ +.++ +++|||++||+|++|+++++.
T Consensus 905 --------------------gl~~~k~~~~------~~~l----------------~~~GNtssasi~~~L~~~~~~--- 939 (979)
T 3tsy_A 905 --------------------NLDKKKLEAT------RHVL----------------SEYGNMSSACVLFILDEMRKK--- 939 (979)
T ss_dssp --------------------TCCTTTTHHH------HHHH----------------HHHCBCTTHHHHHHHHHHHHH---
T ss_pred --------------------CCChHHHHHH------HHHH----------------HHcCCcchhhHHHHHHHHHhh---
Confidence 7888765421 1124 899999999999999998874
Q ss_pred CCCCCEE---------EEEEeccchheeeeEEEEeC
Q 012353 346 ELDGKRV---------VLFSYGSGLTATMFSLKLSE 372 (465)
Q Consensus 346 ~~~G~ri---------ll~syGsG~~~~~~~~~~~~ 372 (465)
+++|++| +|++||+|++|++++++|.+
T Consensus 940 ~~~G~~v~~g~~~~~~ll~~~G~G~t~~~~~l~~~~ 975 (979)
T 3tsy_A 940 SLKGERATTGEGLDWGVLFGFGPGLTIETVVLHSIP 975 (979)
T ss_dssp HHHTTCSBTTTTCSEEEEEEECGGGEEEEEEEECCB
T ss_pred hcccccccCCCCcceeEEEEeCCchHHHHHHHHhcc
Confidence 3456555 99999999999999999976
No 41
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=99.90 E-value=7.1e-23 Score=202.79 Aligned_cols=283 Identities=11% Similarity=0.051 Sum_probs=181.1
Q ss_pred eeEEeEEEEecCCceechHHHHHhcCCChhhh--hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEE
Q 012353 4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKY--TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVG 81 (465)
Q Consensus 4 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~ 81 (465)
++.|.+.+..++ ..|.+.-.+...+++ ....|++. .++...+|+++|+++||+++|++++|||.||++
T Consensus 14 ~~~i~~~~~~~g-----~~E~~gpl~~~fd~~~~d~~fG~~t-----~e~a~sdLa~~Aa~~AL~~AGi~~~DID~II~g 83 (347)
T 3lma_A 14 PLFVNSSGTAVG-----PKEKEGPLGHLFDKSYDEMHCNQKN-----WEMAERKLMEDAVQSALSKQNLKKEDIDIFLAG 83 (347)
T ss_dssp CCEEEEEEEEEC-----HHHHHSTTGGGSSEECSSTTTTSSS-----HHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEEE
T ss_pred CCEEEEEeeeeC-----chhhcCCchhhchhhhcccccCCcC-----ccHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 466777776655 445444333333333 13345432 256778999999999999999999999999999
Q ss_pred eecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccccc-C---CC--
Q 012353 82 SETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA-E---GP-- 155 (465)
Q Consensus 82 T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y~-~---~~-- 155 (465)
|.++ +. ..+.++++.||+ ++||+.++|+|++.||.+|..+|++|.+ ++||||++|..+.. + .+
T Consensus 84 t~t~-q~--~~A~~va~~Lgi------pafdV~~ACsg~~~AL~~Aa~~I~sG~~--~~VLVVGaE~~S~aerq~r~p~e 152 (347)
T 3lma_A 84 DLLN-QN--VTANYVARHLKI------PFLCLFGACSTSMESIAISSALIDGGFA--KRALAATSSHNATAERQFRYPTE 152 (347)
T ss_dssp ESSS-SS--TTHHHHHHHHCC------CEEEBCCSTTHHHHHHHHHHHHHHTTSC--SEEEEEEEECGGGTTCCC-----
T ss_pred eCCC-ch--hHHHHHHHHhCC------CEEEecChhHHHHHHHHHHHHHHhcCCC--CEEEEEEeccccchhhhccCcch
Confidence 9998 33 378899999963 5899999999999999999999999976 99999999987421 1 11
Q ss_pred -------CCcccccceeeeeecCCCCcccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHh
Q 012353 156 -------ARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKY 228 (465)
Q Consensus 156 -------~~~t~GdGA~A~Ll~~~~~~~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~ 228 (465)
....++|||+|+||++.+.- +.+.+.-.-.+.|+ +..-|...|. .-..+..+++..++++.
T Consensus 153 ~g~q~p~ta~~t~dGAGA~VL~~~g~~---p~I~~~t~Gkvvd~-----g~~d~~nmg~----amaPaA~~ti~~~l~d~ 220 (347)
T 3lma_A 153 YGGQKPGTATSTVTGSGAVVLSQQPGG---IKITSATVGRVIDL-----GITDSQDMGS----AMAPAAADTIKQHLEDL 220 (347)
T ss_dssp -----------CCCEEEEEEEESSCCS---EEEEEEECCCCBCC-----SCCCTTCHHH----HHHHHHHHHHHHHHHHH
T ss_pred hcccCCchhcEEccceeEEEEEecCCC---Cceeeeeeeeeecc-----CCCCCCCccc----cchHHHHHHHHHHHHHh
Confidence 12346899999999976531 11111111122221 1110111121 00111112334444554
Q ss_pred hhhhcCCCCCCCCceee---ccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhh
Q 012353 229 EKLEGKQFSLSNADYFV---FHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQL 305 (465)
Q Consensus 229 ~~~~~~~~~~~did~~~---~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~ 305 (465)
|++++|+|+|+ +|+.+.+|++++++++ |++.++.|.|=- +
T Consensus 221 ------g~~~~d~D~ivtgdL~q~g~~il~~l~~~~------------------------g~~~~~~~~dcg-------~ 263 (347)
T 3lma_A 221 ------GRTPDDYDLILTGDLSGVGSPILKDLLKEE------------------------GINVGTKHNDCG-------L 263 (347)
T ss_dssp ------TCCGGGCSEEEEESCHHHHHHHHHHHHHHT------------------------TCCCGGGEEEGG-------G
T ss_pred ------CCCHHHcCEEecCChHHHHHHHHHHHHHHc------------------------CCChhHCccccc-------e
Confidence 89999999999 8899999999999888 777777765511 1
Q ss_pred hhhhhhhccCCCcccccccCccchhhHHHHHHHHHHhcCCCCCCCEEEEEEeccchhee
Q 012353 306 AKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELDGKRVVLFSYGSGLTAT 364 (465)
Q Consensus 306 ~~~~~~~~~~~s~~~~~~~GN~~taS~~l~L~~ll~~~~~~~~G~rill~syGsG~~~~ 364 (465)
..|. .... -.-|-.|++.....|...|-+.-+....+||++++.|++++-.
T Consensus 264 --~iy~----~~~~--~~~ggsg~~csa~v~~~~~~~~~~~g~~~ril~~~tGalls~~ 314 (347)
T 3lma_A 264 --MIYT----PDQQ--VFAGGSGCACSAVVTFAHIFKEIEAGRLNRVLVVATGALLSPT 314 (347)
T ss_dssp --TSSC----C-----------CCCCHHHHHHHTHHHHHHTTSCSEEEEEEEEECCCHH
T ss_pred --EEec----CCCc--ccCCCCccccHHHHHHHHHHHHHhcCcccEEEEEecccccCcc
Confidence 1111 0000 1346777788888887765541111356899999999998643
No 42
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=99.73 E-value=1.1e-16 Score=164.07 Aligned_cols=98 Identities=11% Similarity=0.101 Sum_probs=91.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHH
Q 012353 48 SEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (465)
Q Consensus 48 ~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A 127 (465)
.++++..+|+++|++++|+++|+++++||.|++++.++....|.++..|+..||+ ..++++++++.+|++++.||..|
T Consensus 26 ~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl--~~~~p~~~v~~aCss~~~al~~A 103 (396)
T 4dd5_A 26 FKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGI--PVEKPAMTINIVCGSGLRSVSMA 103 (396)
T ss_dssp TTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTC--CTTSCEEEECCGGGHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCC--CCCceEEEeccccHHHHHHHHHH
Confidence 4578999999999999999999999999999999999888889999999999998 55789999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEEeccc
Q 012353 128 VNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~ 149 (465)
..+|++|.+ +.|||+++|..
T Consensus 104 ~~~I~~G~~--~~vLv~g~e~~ 123 (396)
T 4dd5_A 104 SQLIALGDA--DIMLVGGAENM 123 (396)
T ss_dssp HHHHHHTSC--SEEEEEEEEES
T ss_pred HHHHhcCCC--CEEEEEEEecc
Confidence 999999976 99999999875
No 43
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=99.73 E-value=6.3e-17 Score=165.87 Aligned_cols=98 Identities=6% Similarity=0.105 Sum_probs=90.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHH
Q 012353 48 SEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (465)
Q Consensus 48 ~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A 127 (465)
..+++..+|+++|++++|+++|+++++||.|++++.++....+.++..++..||+ ..++++++++.+|++++.||.+|
T Consensus 24 ~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl--~~~~p~~~v~~aCss~~~al~~A 101 (394)
T 3ss6_A 24 LKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGF--PDTVTGYTIQRQCSSGMQAIMSA 101 (394)
T ss_dssp TTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTC--CTTCEEEEEECGGGHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCC--CCCceEEEecCcchHHHHHHHHH
Confidence 3578899999999999999999999999999999999877778899999999998 55789999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEEeccc
Q 012353 128 VNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~ 149 (465)
..+|++|.+ +.|||+++|..
T Consensus 102 ~~~I~~G~~--~~vlv~G~e~~ 121 (394)
T 3ss6_A 102 AMQIQLGVS--EVVVAGGVEAM 121 (394)
T ss_dssp HHHHHHTSC--SEEEEEEEEEC
T ss_pred HHHHhCCCC--CEEEEEEEhhc
Confidence 999999977 99999999875
No 44
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=99.73 E-value=1.3e-16 Score=163.67 Aligned_cols=97 Identities=8% Similarity=0.103 Sum_probs=90.5
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHH
Q 012353 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (465)
Q Consensus 49 ~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~ 128 (465)
.+++..+|+++|++++|+++|+++++||.|++++.++....+.++..++..||+ ..+++++++..+|++++.||..|.
T Consensus 25 ~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl--~~~~p~~~v~~~Css~~~al~~A~ 102 (395)
T 4e1l_A 25 KNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGI--PNSVPSYTVNKLCGSGLKSVQLAA 102 (395)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTC--CTTSCEEEECCGGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCC--CCCceEEEccccchHHHHHHHHHH
Confidence 578899999999999999999999999999999999887788999999999998 557899999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEEeccc
Q 012353 129 NWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 129 ~~l~sg~~~~~~aLVVasD~~ 149 (465)
.+|++|.+ +.|||+++|..
T Consensus 103 ~~I~~G~~--~~vlv~g~e~~ 121 (395)
T 4e1l_A 103 QSITSGEN--DVVIAGGTENM 121 (395)
T ss_dssp HHHHTTSC--SEEEEEEEEET
T ss_pred HHHhCCCC--CEEEEEEEecc
Confidence 99999977 99999999865
No 45
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.72 E-value=5.8e-16 Score=160.17 Aligned_cols=298 Identities=12% Similarity=0.121 Sum_probs=182.9
Q ss_pred CCceeEEeEEEEecCCceechHHHHHhc--CCC---------hhhhhhhhcCeEEecC------CC-----CCCHHHHHH
Q 012353 1 MAKNVGILAMDIYFPPTCVQQEALEAHD--GAS---------KGKYTIGLGQECMAFC------SE-----VEDVISMSL 58 (465)
Q Consensus 1 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~---------~~k~~~Gig~r~~av~------~~-----~Ed~~~la~ 58 (465)
|.++|-|.+++..+|.-. +.+++.+.. |.+ +..+...++- .+.|. ++ -.....|++
T Consensus 1 M~~~vaI~G~g~~~p~g~-~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~-~~~fd~~~~~i~~~~~~~~d~~~~l~l 78 (424)
T 1tqy_A 1 MKRRVVITGVGVRAPGGN-GTRQFWELLTSGRTATRRISFFDPSPYRSQVAA-EADFDPVAEGFGPRELDRMDRASQFAV 78 (424)
T ss_dssp --CCEEEEEEEEEETTEE-SHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEE-CCCCCHHHHTCCHHHHHHSCHHHHHHH
T ss_pred CCCCEEEEeeEEECCCCC-CHHHHHHHHHcCCCceeeCCCcccccCCcceeE-EeccCHhhcCCCHHHHHhcCHHHHHHH
Confidence 556899999999999885 777765543 322 1111000000 00010 00 112468999
Q ss_pred HHHHHHHHHCCCCcCCcc----EEEEEeecCCC---------------------------CcccH-HH----HHHHHhcc
Q 012353 59 TAVTNLLEKYKIDPKQIG----RLEVGSETVID---------------------------KSKSI-KT----FLMQIFEK 102 (465)
Q Consensus 59 ~Aa~~aL~~agi~~~~Id----~li~~T~s~~~---------------------------~~ps~-a~----~l~~~LGl 102 (465)
+|++++|+++|+++++|| .|+++|.++.. ..|+. +. +|+..||+
T Consensus 79 ~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ia~~lgl 158 (424)
T 1tqy_A 79 ACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGA 158 (424)
T ss_dssp HHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHHHHhcCC
Confidence 999999999999999999 68999876532 11222 34 99999997
Q ss_pred cCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc--cc-----------cC------C--------C
Q 012353 103 FGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA--VY-----------AE------G--------P 155 (465)
Q Consensus 103 ~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~--~y-----------~~------~--------~ 155 (465)
. .+++++..+|++++.||..|..+|++|.+ +.|||+++|.. .+ .. . .
T Consensus 159 ---~-gp~~~v~~aCsS~l~Al~~A~~~I~~G~~--d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~ 232 (424)
T 1tqy_A 159 ---E-GPVTMVSTGCTSGLDSVGNAVRAIEEGSA--DVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPFDGTR 232 (424)
T ss_dssp ---C-SCEEEECCGGGHHHHHHHHHHHHHHHTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCCCSCGGGCCCTTBTTC
T ss_pred ---C-CceEeecCcccHHHHHHHHHHHHHHCCCC--CEEEEeeecccCCHHHHHHHHhhccccCCCCCCCCCccCCCCCC
Confidence 2 36799999999999999999999999987 99999999974 10 00 0 1
Q ss_pred CCcccccceeeeeecCCCCc-----cccccccccccc-CcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhh
Q 012353 156 ARPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE 229 (465)
Q Consensus 156 ~~~t~GdGA~A~Ll~~~~~~-----~~~~~~~~~~~~-~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~ 229 (465)
+...+||||+|+||.+.+.. .+...+.|+... +...... |..+|. ....+++..+++.
T Consensus 233 ~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~-------p~~~g~--------~~~~ai~~al~~a- 296 (424)
T 1tqy_A 233 DGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTG-------LKADGR--------EMAETIRVALDES- 296 (424)
T ss_dssp CCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSC-------CCTTCH--------HHHHHHHHHHHHH-
T ss_pred CceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCC-------CCCCHH--------HHHHHHHHHHHHc-
Confidence 23568999999999864210 000012222211 1111111 222342 2333444455554
Q ss_pred hhhcCCCCCCCCceeeccCCchHHHHHHHHHhhhhhhcccccchhhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhh
Q 012353 230 KLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPL 309 (465)
Q Consensus 230 ~~~~~~~~~~did~~~~H~p~~km~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~k~~~~~~~~~ 309 (465)
+++++|||++..|+.++.+.+.+....+ ...+. ...+
T Consensus 297 -----gl~~~dId~ve~Hgtgt~~gD~~E~~al-~~~f~------------------~~~~------------------- 333 (424)
T 1tqy_A 297 -----RTDATDIDYINAHGSGTRQNDRHETAAY-KRALG------------------EHAR------------------- 333 (424)
T ss_dssp -----TCCGGGCCEEECCCCCCHHHHHHHHHHH-HHHTG------------------GGGG-------------------
T ss_pred -----CCCHHHCCEEEecCccCcCcCHHHHHHH-HHHhc------------------ccCC-------------------
Confidence 7999999999999999987654432221 00000 0000
Q ss_pred hhhccCCCcccccccCccchhhHHHHHHHH---HHhcCCC------------------------CCCCEEEEEEeccchh
Q 012353 310 YDAKVQPSTLIPKQVGNMYTASLYAALASL---IHNKHSE------------------------LDGKRVVLFSYGSGLT 362 (465)
Q Consensus 310 ~~~~~~~s~~~~~~~GN~~taS~~l~L~~l---l~~~~~~------------------------~~G~rill~syGsG~~ 362 (465)
++.-+ .+-..+||+.+|+-.+.|..+ |++ +.+ .+.+++++.|||-|.+
T Consensus 334 ---~~~v~-s~k~~~GH~~~AaG~~~l~~~~l~l~~-~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfG~GG~ 408 (424)
T 1tqy_A 334 ---RTPVS-SIKSMVGHSLGAIGSLEIAACVLALEH-GVVPPTANLRTSDPECDLDYVPLEARERKLRSVLTVGSGFGGF 408 (424)
T ss_dssp ---GSCEE-CTHHHHCBCTTTHHHHHHHHHHHHHHH-CEECCBTTCCSBBTTBCSCCCBSSCEECCCSEEEEEEEETTTE
T ss_pred ---CCeee-ccccccccChhhhHHHHHHHHHHHHHc-CCcCCCCCCCCCCCCCCcccCCCcccCCCCCEEEEccccCCce
Confidence 00000 011468999999988777763 333 221 1468899999999888
Q ss_pred eeeeEEEE
Q 012353 363 ATMFSLKL 370 (465)
Q Consensus 363 ~~~~~~~~ 370 (465)
...++++.
T Consensus 409 n~~~vl~~ 416 (424)
T 1tqy_A 409 QSAMVLRD 416 (424)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcc
Confidence 88777764
No 46
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=99.70 E-value=4.6e-15 Score=152.91 Aligned_cols=230 Identities=11% Similarity=0.087 Sum_probs=147.2
Q ss_pred CC-ceeEEeEEEEecCCceechHHHHHhc--CCCh----hhh-hhhhcCeEEe-cCC-------------CCCCHHHHHH
Q 012353 1 MA-KNVGILAMDIYFPPTCVQQEALEAHD--GASK----GKY-TIGLGQECMA-FCS-------------EVEDVISMSL 58 (465)
Q Consensus 1 ~~-~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~-~~Gig~r~~a-v~~-------------~~Ed~~~la~ 58 (465)
|. +.|.|.+++.++|.- .+.+++.+.. |.+. .++ ..+...+... +.. .-.....|++
T Consensus 1 M~~~~v~ItG~g~~~P~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l 79 (413)
T 3o04_A 1 MDKRRVVVTGIGAVTPIG-NDAETSWENAKKGVNGVAKMTRLNPDDFPVKIAAELKDFDVEKYLEKKEARKMDRFTHYAI 79 (413)
T ss_dssp CCCCCEEEEEEEEEBTTB-SSHHHHHHHHHTTCCCEEECCSSCGGGSSCCEEECCSSCCGGGTSCHHHHTTSCHHHHHHH
T ss_pred CCCCCEEEEEeEEECCCC-CCHHHHHHHHHcCCCceeeCCccccccCccccccccCCCChhhccCHHHHhhCCHHHHHHH
Confidence 44 469999999999987 5777765542 2210 001 0001111000 000 1123567999
Q ss_pred HHHHHHHHHCCCCcCCcc----EEEEEeecC-----------------CCCcc---------cHHHHHHHHhcccCCCCc
Q 012353 59 TAVTNLLEKYKIDPKQIG----RLEVGSETV-----------------IDKSK---------SIKTFLMQIFEKFGNTDI 108 (465)
Q Consensus 59 ~Aa~~aL~~agi~~~~Id----~li~~T~s~-----------------~~~~p---------s~a~~l~~~LGl~g~~~~ 108 (465)
+|++++|+++|+++++|| .|+++|.++ ....| ..+.+|+..||+ . .
T Consensus 80 ~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl---~-g 155 (413)
T 3o04_A 80 ASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGA---K-G 155 (413)
T ss_dssp HHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTC---C-S
T ss_pred HHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCC---C-C
Confidence 999999999999999999 999998752 22222 248899999997 2 2
Q ss_pred eeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc---------------c-----------ccCCCCCccccc
Q 012353 109 EGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA---------------V-----------YAEGPARPTGGA 162 (465)
Q Consensus 109 ~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~---------------~-----------y~~~~~~~t~Gd 162 (465)
+++++..+|++++.||..|..+|++|.+ +.|||+++|.. . |.......++||
T Consensus 156 p~~~v~~aCss~~~Al~~A~~~I~~G~~--d~~lvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~~~g~~~gd 233 (413)
T 3o04_A 156 INSTTVTACATATNSIGDAFKVIERGDA--DAMITGGAEAPITKMSLAGFTANKALSLNPDPETACRPFDKDRDGFIIGE 233 (413)
T ss_dssp CEECCCCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSCCTTBTTCCSBCBBC
T ss_pred cceeecchhHHHHHHHHHHHHHHHcCCC--CEEEEeEEcccCCHHHHHHHHhcccccCCCCCCCCcCCCcCCCCCceEec
Confidence 6889999999999999999999999987 99999999972 0 000112346899
Q ss_pred ceeeeeecCCCCc-----cccccccccccc-CcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 012353 163 AAVVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQF 236 (465)
Q Consensus 163 GA~A~Ll~~~~~~-----~~~~~~~~~~~~-~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~ 236 (465)
||+|+||++.+.. .+...+.++... +.+.... |..++ .....+++..+++. |+
T Consensus 234 GAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~-------~~~~~--------~~~~~a~~~al~~a------gl 292 (413)
T 3o04_A 234 GAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITA-------PAPNG--------EGAARAMKMAIDDA------GL 292 (413)
T ss_dssp EEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSS-------CCGGG--------HHHHHHHHHHHHHH------TC
T ss_pred cEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCC-------CCCCH--------HHHHHHHHHHHHHc------CC
Confidence 9999999864210 000012222211 1111111 11222 12334455555554 79
Q ss_pred CCCCCceeeccCCchHHHHHHH
Q 012353 237 SLSNADYFVFHSPYNKLVQKSF 258 (465)
Q Consensus 237 ~~~did~~~~H~p~~km~~~~~ 258 (465)
+++|||++.+|..++.+.+...
T Consensus 293 ~~~dId~ve~HgtgT~~~d~~e 314 (413)
T 3o04_A 293 TPDKVDYINAHGTSTPYNDEYE 314 (413)
T ss_dssp CGGGCCEEECCCCCCHHHHHHH
T ss_pred CHHHcCEEEEeCCcCcccCHHH
Confidence 9999999999999998776543
No 47
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=99.68 E-value=5.8e-16 Score=159.83 Aligned_cols=131 Identities=10% Similarity=0.075 Sum_probs=93.4
Q ss_pred cCCceechHHHHHhcCC---Chhhh----hhhhcCeEEecCCCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCC
Q 012353 14 FPPTCVQQEALEAHDGA---SKGKY----TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVI 86 (465)
Q Consensus 14 ~P~~~v~~~~l~~~~g~---~~~k~----~~Gig~r~~av~~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~ 86 (465)
-|+++++|+++++..+. +..++ ++.++.++. ....+++..+|+++|++++|+++|+++++||.|++++.++.
T Consensus 10 ~P~~~~~n~~~~~~~~~~~~~~v~Ivg~~rt~~g~~~~-~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~ 88 (418)
T 2iik_A 10 GVDLGTENLYFQSMAPQASAADVVVVHGRRTAICRAGR-GGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQP 88 (418)
T ss_dssp -----------------CCTTCEEEEEEEECCCEETTT-STTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSB
T ss_pred CCCccccHHHHHHHhhhccCCCeEEEeeeecCceecCC-CCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCc
Confidence 49999999999987653 32222 234443211 12467899999999999999999999999999999998887
Q ss_pred CCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc
Q 012353 87 DKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 87 ~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~ 149 (465)
...+..+..++..||+ ..+++++++..+|++++.||..|..+|++|.+ +.|||+++|..
T Consensus 89 ~~~~~~a~~~a~~lGl--~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~--d~vLv~G~e~~ 147 (418)
T 2iik_A 89 GAGAIMARIAQFLSDI--PETVPLSTVNRQCSSGLQAVASIAGGIRNGSY--DIGMACGVESM 147 (418)
T ss_dssp GGGHHHHHHHHHHTTC--CTTSCEEEEECGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEEET
T ss_pred cccccHHHHHHHHcCC--CCCceEEEeCCCCHHHHHHHHHHHHHHHCCCC--CEEEEeccccC
Confidence 6566778888899997 45788999999999999999999999999977 99999999864
No 48
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=99.66 E-value=1.1e-14 Score=149.94 Aligned_cols=226 Identities=16% Similarity=0.140 Sum_probs=144.5
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc--CCCh----hhhh-hhhcCeEE---ecCC----------CCCCHHHHHHHHHH
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD--GASK----GKYT-IGLGQECM---AFCS----------EVEDVISMSLTAVT 62 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~~-~Gig~r~~---av~~----------~~Ed~~~la~~Aa~ 62 (465)
+.|-|.++++.+|--. +.+++.+.. |.+. .++. .++..+.- .|.. .-.....|+++|++
T Consensus 2 ~~v~I~G~g~~~p~g~-~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~d~~~~l~~~aa~ 80 (408)
T 1j3n_A 2 RRVVVTGLGALTPIGV-GQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEVDVDPGAYLDRKELRRLDRFVQYALIAAQ 80 (408)
T ss_dssp CCEEEEEEEEEETTEE-SHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCCCCGGGTSCHHHHTTSCHHHHHHHHHHH
T ss_pred CCEEEEEeEEECCCCC-CHHHHHHHHHcCCCeeeeccccCcccCccceEEEEccChhhcCCHHHHHhcCHHHHHHHHHHH
Confidence 5799999999999875 667665432 2211 0110 01100100 0110 01235789999999
Q ss_pred HHHHHCCCCcCCccE----EEEEeecCCCC-------------------------cc-cHHHHHHHHhcccCCCCceeEe
Q 012353 63 NLLEKYKIDPKQIGR----LEVGSETVIDK-------------------------SK-SIKTFLMQIFEKFGNTDIEGVD 112 (465)
Q Consensus 63 ~aL~~agi~~~~Id~----li~~T~s~~~~-------------------------~p-s~a~~l~~~LGl~g~~~~~~~d 112 (465)
++|+++|+++++||. ++++|.++.+. .+ ..+.+|+..||+ . .++++
T Consensus 81 ~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl---~-gp~~~ 156 (408)
T 1j3n_A 81 LALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGF---T-GPSST 156 (408)
T ss_dssp HHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC---C-SCBCC
T ss_pred HHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhCC---C-CceeC
Confidence 999999999999984 77887765321 12 468899999997 2 26789
Q ss_pred ecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc--c----------c-c--------------CCCCCccccccee
Q 012353 113 STNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA--V----------Y-A--------------EGPARPTGGAAAV 165 (465)
Q Consensus 113 i~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~--~----------y-~--------------~~~~~~t~GdGA~ 165 (465)
+.++|++++.||..|..+|++|.+ +.|||+++|.. . + . ...+..++||||+
T Consensus 157 v~~aCsS~l~Al~~A~~~I~~G~~--d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dg~v~geGaa 234 (408)
T 1j3n_A 157 VVTACATGADALGSALRMIQLGEA--DLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAG 234 (408)
T ss_dssp BCCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCCBCBBCEEE
T ss_pred ccCchHHHHHHHHHHHHHHHcCCC--CEEEEeeecccCCHHHHHHHHhcccccCCCCCCCcCcccCcCCCCceEEeeeEE
Confidence 999999999999999999999977 99999999963 1 0 1 0112456899999
Q ss_pred eeeecCCCCc-----cccccccccccc-CcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCC
Q 012353 166 VMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLS 239 (465)
Q Consensus 166 A~Ll~~~~~~-----~~~~~~~~~~~~-~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (465)
|+||++.+.. .+...+.|+... +...... |..++. ....+++..+++. |++++
T Consensus 235 avvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~-------p~~~~~--------~~~~ai~~al~~A------gl~~~ 293 (408)
T 1j3n_A 235 VLVLEAYEHAKKRGARIYAELVGFGRSADAHHITE-------PHPEGK--------GAALAMARALKDA------GIAPE 293 (408)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSC-------CCTTCH--------HHHHHHHHHHHHH------TCCGG
T ss_pred EEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCC-------CCCCHH--------HHHHHHHHHHHHc------CCCHH
Confidence 9999764210 000012222211 1111112 222332 2233444444554 79999
Q ss_pred CCceeeccCCchHHHHH
Q 012353 240 NADYFVFHSPYNKLVQK 256 (465)
Q Consensus 240 did~~~~H~p~~km~~~ 256 (465)
|||++.+|+.++++.+.
T Consensus 294 dId~ve~Hgtgt~~gD~ 310 (408)
T 1j3n_A 294 QVGYINAHGTSTPVGDR 310 (408)
T ss_dssp GCCEEECCCCSCHHHHH
T ss_pred HcCEEEEeCCcCcccCH
Confidence 99999999999987444
No 49
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=99.66 E-value=2.1e-14 Score=148.96 Aligned_cols=227 Identities=13% Similarity=0.120 Sum_probs=146.9
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc--CCCh----hhh-hhhhcCeEEe----cC-----CCC-----CCHHHHHHHHH
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD--GASK----GKY-TIGLGQECMA----FC-----SEV-----EDVISMSLTAV 61 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~-~~Gig~r~~a----v~-----~~~-----Ed~~~la~~Aa 61 (465)
++|-|.++++.+|.. .+.+++.+.. |.+. .++ ..++..+... |. ++. .....|+++|+
T Consensus 28 ~~vaI~G~g~~~P~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~~~l~l~aa 106 (437)
T 2gqd_A 28 KRVVITGMGALSPIG-NDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHIDKKEARRMDRFTQYAIVAA 106 (437)
T ss_dssp CCEEEEEEEEEBTTB-SSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCSSCCGGGTSCSTTTTTSCHHHHHHHHHH
T ss_pred CCEEEEEeeEECCCC-CCHHHHHHHHHcCCCceeeCCccccccCccceeEEeCCCChhcCCCHHHHHhcCHHHHHHHHHH
Confidence 359999999999988 4666665432 2211 011 0011111111 00 111 12578999999
Q ss_pred HHHHHHCCCCcCCcc----EEEEEeecCCC-----------------Cc---------ccHHHHHHHHhcccCCCCceeE
Q 012353 62 TNLLEKYKIDPKQIG----RLEVGSETVID-----------------KS---------KSIKTFLMQIFEKFGNTDIEGV 111 (465)
Q Consensus 62 ~~aL~~agi~~~~Id----~li~~T~s~~~-----------------~~---------ps~a~~l~~~LGl~g~~~~~~~ 111 (465)
+++|+++|+++++|| .|+++|.++.. .. ..++.+|+..||+ .. +++
T Consensus 107 ~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl---~g-p~~ 182 (437)
T 2gqd_A 107 REAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGA---KG-PNG 182 (437)
T ss_dssp HHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC---CS-SEE
T ss_pred HHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCC---CC-ceE
Confidence 999999999999999 99999876531 11 2578899999997 22 678
Q ss_pred eecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc--cc------------------------cCCCCCccccccee
Q 012353 112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA--VY------------------------AEGPARPTGGAAAV 165 (465)
Q Consensus 112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~--~y------------------------~~~~~~~t~GdGA~ 165 (465)
++..+|++++.||..|..+|++|.+ +.|||+++|.. .+ +...+...+||||+
T Consensus 183 ~v~~aCsS~l~Al~~A~~~I~~G~~--d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~~~G~v~geGaa 260 (437)
T 2gqd_A 183 ATVTACATGTNSIGEAFKIVQRGDA--DAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEGRDGFVMGEGAG 260 (437)
T ss_dssp CBCCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSSCTTCTTCCSBCBBCEEE
T ss_pred EecCCccHHHHHHHHHHHHHHcCCC--CEEEEeeeccccCHHHHHHHHhccCccCCCCCccccCCCCCCCCCceeeceEE
Confidence 8999999999999999999999977 99999999963 11 01112356899999
Q ss_pred eeeecCCCCc-----cccccccccccc-CcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCC
Q 012353 166 VMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLS 239 (465)
Q Consensus 166 A~Ll~~~~~~-----~~~~~~~~~~~~-~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (465)
|+||.+.+.. .+...+.|+... +...+.. |..++. ....+++..+++. |++++
T Consensus 261 avvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~-------p~~~~~--------~~~~ai~~Al~~A------gl~p~ 319 (437)
T 2gqd_A 261 ILVIESLESAQARGANIYAEIVGYGTTGDAYHITA-------PAPEGE--------GGSRAMQAAMDDA------GIEPK 319 (437)
T ss_dssp EEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSS-------CCGGGH--------HHHHHHHHHHHHH------TCCGG
T ss_pred EEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCC-------CCCCHH--------HHHHHHHHHHHHc------CCCHh
Confidence 9999764210 000012222221 1111112 212222 2333445555554 79999
Q ss_pred CCceeeccCCchHHHHHH
Q 012353 240 NADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 240 did~~~~H~p~~km~~~~ 257 (465)
|||++.+|+.++++.+.+
T Consensus 320 dId~ve~HgtgT~~~D~~ 337 (437)
T 2gqd_A 320 DVQYLNAHGTSTPVGDLN 337 (437)
T ss_dssp GCCEEECCCCSCHHHHHH
T ss_pred hCCEEEEECCCCcCcCHH
Confidence 999999999999987644
No 50
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=99.65 E-value=2.5e-14 Score=148.24 Aligned_cols=226 Identities=13% Similarity=0.069 Sum_probs=146.0
Q ss_pred eeEEeEEEEecCCceechHHHHHhc--CCCh----hhh-hhhhcCeEEecCC---------C-----CCCHHHHHHHHHH
Q 012353 4 NVGILAMDIYFPPTCVQQEALEAHD--GASK----GKY-TIGLGQECMAFCS---------E-----VEDVISMSLTAVT 62 (465)
Q Consensus 4 ~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~-~~Gig~r~~av~~---------~-----~Ed~~~la~~Aa~ 62 (465)
+|.|.++++.+|.. .+.+++.+.. |.+. .++ ..++..+.-...+ + -.....|+++|++
T Consensus 24 ~v~ItG~g~~~P~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~d~~~~l~l~aa~ 102 (430)
T 1ox0_A 24 RVVVTGYGVTSPIG-NTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDKYFVKKDTNRFDNYSLYALYAAQ 102 (430)
T ss_dssp CEEEEEEEEEBTTB-SSHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCSSCCHHHHCCGGGGGTCCHHHHHHHHHHH
T ss_pred CEEEEEEEEECCCc-CCHHHHHHHHHcCCCeeeeCCcccccCCccceeeeccCCChhhcCCHHHHHhcCHHHHHHHHHHH
Confidence 59999999999987 5776665443 3211 011 0111111111100 0 1124689999999
Q ss_pred HHHHHCCCCcCCcc----EEEEEeecCCC---------------------Ccc-----cHHHHHHHHhcccCCCCceeEe
Q 012353 63 NLLEKYKIDPKQIG----RLEVGSETVID---------------------KSK-----SIKTFLMQIFEKFGNTDIEGVD 112 (465)
Q Consensus 63 ~aL~~agi~~~~Id----~li~~T~s~~~---------------------~~p-----s~a~~l~~~LGl~g~~~~~~~d 112 (465)
++|+++|+++++|| .|+++|.++.. ..| .++.+|+..||+ . .++++
T Consensus 103 ~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl---~-Gp~~~ 178 (430)
T 1ox0_A 103 EAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGA---N-GVCKS 178 (430)
T ss_dssp HHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC---C-SCEEC
T ss_pred HHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcC---C-CceEe
Confidence 99999999999999 58888876531 111 478899999997 2 36899
Q ss_pred ecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-c------------c-----C--------CCCCcccccceee
Q 012353 113 STNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-Y------------A-----E--------GPARPTGGAAAVV 166 (465)
Q Consensus 113 i~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-y------------~-----~--------~~~~~t~GdGA~A 166 (465)
+.++|++++.||..|..+|++|.+ +.|||+++|... . . + ..+...+||||+|
T Consensus 179 v~~aCsS~l~Al~~A~~~I~~G~~--d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pFd~~~~g~~~geGAaa 256 (430)
T 1ox0_A 179 INTACSSSNDAIGDAFRSIKFGFQ--DVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRNGFVMGEGSGM 256 (430)
T ss_dssp CCCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCCSSTTSSSCTTBTTCCSBCBCCEEEE
T ss_pred ecCchHHHHHHHHHHHHHHHcCCC--CEEEEeeeccccCHHHHHHHHhCCCccCCCCCCCCCCCCCCCCCCccccceEEE
Confidence 999999999999999999999977 999999999741 0 0 0 1123568999999
Q ss_pred eeecCCCC-----cccccccccccc-cCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 012353 167 MLVGPDAP-----VAFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240 (465)
Q Consensus 167 ~Ll~~~~~-----~~~~~~~~~~~~-~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~d 240 (465)
+||++.+. ..+...+.|+.. .+......| ..++. ....+++..+++. |++++|
T Consensus 257 vvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p-------~~~~~--------~~~~ai~~al~~A------gl~~~d 315 (430)
T 1ox0_A 257 LVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSP-------HPEGQ--------GAIKAIKLALEEA------EISPEQ 315 (430)
T ss_dssp EEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSC-------CTTCH--------HHHHHHHHHHHHH------TCCGGG
T ss_pred EEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCC-------CCChH--------HHHHHHHHHHHHh------CcCHHH
Confidence 99986421 000001222211 111112222 12232 2233444555554 799999
Q ss_pred CceeeccCCchHHHHHH
Q 012353 241 ADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 241 id~~~~H~p~~km~~~~ 257 (465)
||++..|+.++.+.+..
T Consensus 316 Id~ve~Hgtgt~~~D~~ 332 (430)
T 1ox0_A 316 VAYVNAHGTSTPANEKG 332 (430)
T ss_dssp CCCEECCCCSCHHHHHH
T ss_pred cCEEEEeCCcCcccCHH
Confidence 99999999999987654
No 51
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=99.65 E-value=3.8e-14 Score=146.18 Aligned_cols=226 Identities=11% Similarity=0.081 Sum_probs=145.9
Q ss_pred eeEEeEEEEecCCceechHHHHHhc--CCCh----hhh-hhhhcCeEEecCC-CC-------------CCHHHHHHHHHH
Q 012353 4 NVGILAMDIYFPPTCVQQEALEAHD--GASK----GKY-TIGLGQECMAFCS-EV-------------EDVISMSLTAVT 62 (465)
Q Consensus 4 ~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~-~~Gig~r~~av~~-~~-------------Ed~~~la~~Aa~ 62 (465)
+|.|.++++.+|... +.+++.+.. |.+. .++ ..++..+.....+ .+ .....|+++|++
T Consensus 8 ~v~I~G~g~~~p~g~-~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~~~l~l~aa~ 86 (416)
T 1e5m_A 8 RVVVTGLGAITPIGN-TLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKRMDRFCHFAVCASQ 86 (416)
T ss_dssp CEEEEEEEEEBTTBS-SHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCSCCGGGTSCHHHHHTSCHHHHHHHHHHH
T ss_pred CEEEEeeeEECCCCC-CHHHHHHHHHcCCCeEeeCCccccccCccceeEEeCCCCccccCCHHHHHhcCHHHHHHHHHHH
Confidence 599999999999884 666655442 2211 011 0111111111111 00 123589999999
Q ss_pred HHHHHCCCCcCCcc----EEEEEeecCCC-----------------Cc---------ccHHHHHHHHhcccCCCCceeEe
Q 012353 63 NLLEKYKIDPKQIG----RLEVGSETVID-----------------KS---------KSIKTFLMQIFEKFGNTDIEGVD 112 (465)
Q Consensus 63 ~aL~~agi~~~~Id----~li~~T~s~~~-----------------~~---------ps~a~~l~~~LGl~g~~~~~~~d 112 (465)
++|+++|+++++|| .|+++|.++.. .. ..++.+|+..||+ . .++++
T Consensus 87 ~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl---~-gp~~~ 162 (416)
T 1e5m_A 87 QAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA---K-GPNNC 162 (416)
T ss_dssp HHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC---C-SCEEC
T ss_pred HHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCC---C-CceeC
Confidence 99999999999999 79999876531 11 2478899999997 2 36789
Q ss_pred ecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc-c-c-----------c--------------CCCCCccccccee
Q 012353 113 STNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V-Y-----------A--------------EGPARPTGGAAAV 165 (465)
Q Consensus 113 i~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~-y-----------~--------------~~~~~~t~GdGA~ 165 (465)
+..+|++++.||..|..+|++|.+ +.|||+++|.. . . . ...+...+||||+
T Consensus 163 v~~aCsS~l~Al~~A~~~I~~G~~--d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~geGaa 240 (416)
T 1e5m_A 163 TVTACAAGSNAIGDAFRLVQNGYA--KAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSG 240 (416)
T ss_dssp CCCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTTCCSBCBBCEEE
T ss_pred ccchhHHHHHHHHHHHHHHHcCCC--CEEEEeeecccCCHHHHHHHHHcCCccCCCCCCccccccCccCCCCceeeeeEE
Confidence 999999999999999999999977 99999999963 1 1 0 0012356899999
Q ss_pred eeeecCCCCc-----cccccccccccc-CcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCC
Q 012353 166 VMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLS 239 (465)
Q Consensus 166 A~Ll~~~~~~-----~~~~~~~~~~~~-~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (465)
|+||.+.+.. .+...+.|+... +...+..| ..++. ....+++..+++. |++++
T Consensus 241 avvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p-------~~~~~--------~~~~ai~~al~~a------gl~~~ 299 (416)
T 1e5m_A 241 ILILEELESALARGAKIYGEMVGYAMTCDAYHITAP-------VPDGR--------GATRAIAWALKDS------GLKPE 299 (416)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSC-------CTTCH--------HHHHHHHHHHHHH------TCCGG
T ss_pred EEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCC-------CCCHH--------HHHHHHHHHHHHc------CCCHh
Confidence 9999864210 000012222221 11112222 22332 2233444455554 79999
Q ss_pred CCceeeccCCchHHHHHH
Q 012353 240 NADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 240 did~~~~H~p~~km~~~~ 257 (465)
|||++..|+.++++.+.+
T Consensus 300 dId~ve~Hgtgt~~~D~~ 317 (416)
T 1e5m_A 300 MVSYINAHGTSTPANDVT 317 (416)
T ss_dssp GCCEEECCCCSCHHHHHH
T ss_pred HCCEEEEECCCCcCcCHH
Confidence 999999999999877654
No 52
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=99.62 E-value=9.8e-15 Score=150.09 Aligned_cols=97 Identities=15% Similarity=0.124 Sum_probs=81.6
Q ss_pred CCCCHHHHHHHHHHHHHHH-CCCCcCCccEEEEEeecCCCC-cccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHH
Q 012353 49 EVEDVISMSLTAVTNLLEK-YKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFN 126 (465)
Q Consensus 49 ~~Ed~~~la~~Aa~~aL~~-agi~~~~Id~li~~T~s~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~ 126 (465)
.+++..+|+++|++++|++ +|+++++||.|++++.++... .+.++..++..||+ +..+++++++.+|++++.||..
T Consensus 28 ~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGl--p~~~pa~~v~~~Css~~~Al~~ 105 (407)
T 3svk_A 28 TEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGL--PETTGGVQLNRFCASGLEAVNT 105 (407)
T ss_dssp TTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTC--CTTCEEEEEC---CBSCCHHHH
T ss_pred CCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCC--CCCCceEEecCcChhHHHHHHH
Confidence 4688999999999999999 999999999999999887653 57889999999998 5689999999999999999999
Q ss_pred HHHHHHcCCCCCCEEEEEEeccc
Q 012353 127 CVNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 127 A~~~l~sg~~~~~~aLVVasD~~ 149 (465)
|..+|++|.+ +.|||+++|..
T Consensus 106 A~~~I~sG~~--d~vLv~G~e~~ 126 (407)
T 3svk_A 106 AAQKVRSGWD--DLVLAGGVESM 126 (407)
T ss_dssp HHHHHHHTSC--CEEEEEEEECC
T ss_pred HHHHHHcCCC--CEEEEEEEccc
Confidence 9999999977 99999999865
No 53
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=99.62 E-value=2.7e-14 Score=147.84 Aligned_cols=227 Identities=12% Similarity=0.092 Sum_probs=144.1
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc--CCC---h-hhhh-hhhcCeEEe-cCCC-------------CCCHHHHHHHHH
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD--GAS---K-GKYT-IGLGQECMA-FCSE-------------VEDVISMSLTAV 61 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~---~-~k~~-~Gig~r~~a-v~~~-------------~Ed~~~la~~Aa 61 (465)
++|-|.+++..+|--. +.+++.+.. |.+ + .++. .+...+.-. +.+. -.....|+++|+
T Consensus 18 ~~v~I~G~g~~~p~g~-~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~aa 96 (427)
T 3ho9_A 18 RRVVVTGLGMLSPVGN-TVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAG 96 (427)
T ss_dssp CCEEEEEEEEEBTTBS-SHHHHHHHHHTTCCCEEECCSSCCTTCSCCEEECCSSCCCTTTSCHHHHTTSCHHHHHHHHHH
T ss_pred CCEEEEeeeEECCCCC-CHHHHHHHHHcCCCceeeCCccccccCccceeeEcCCCChhhcCCHHHHhhCCHHHHHHHHHH
Confidence 5699999999999874 677665543 322 1 0110 011111111 1110 012468999999
Q ss_pred HHHHHHCCCCcCCcc----EEEEEeecCC--------------------------CCcccHHHHHHHHhcccCCCCceeE
Q 012353 62 TNLLEKYKIDPKQIG----RLEVGSETVI--------------------------DKSKSIKTFLMQIFEKFGNTDIEGV 111 (465)
Q Consensus 62 ~~aL~~agi~~~~Id----~li~~T~s~~--------------------------~~~ps~a~~l~~~LGl~g~~~~~~~ 111 (465)
+++|+++|+++++|| .++++|.++. ...+.++..|+..||+. .+++
T Consensus 97 ~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~----Gp~~ 172 (427)
T 3ho9_A 97 VQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLR----GPSI 172 (427)
T ss_dssp HHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC----SCEE
T ss_pred HHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCCC----CCee
Confidence 999999999999999 5888887531 11235788999999982 3588
Q ss_pred eecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-------c--------------------cCCCCCcccccce
Q 012353 112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------Y--------------------AEGPARPTGGAAA 164 (465)
Q Consensus 112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y--------------------~~~~~~~t~GdGA 164 (465)
.+..||++++.||..|..+|++|.+ +.|||+++|... + .......++||||
T Consensus 173 ~v~taCsS~l~Al~~A~~~I~~G~~--d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~v~geGA 250 (427)
T 3ho9_A 173 SIATAATSGVHNIGHAARIIAYGDA--DVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGA 250 (427)
T ss_dssp CCCCGGGHHHHHHHHHHHHHHHTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCSBCBBCEE
T ss_pred cccchhHHHHHHHHHHHHHHHcCCC--CEEEEeeecccCCHHHHHHHHhccCcccCCCCCCcccCCccCCCCCceeeeeE
Confidence 8999999999999999999999987 999999999862 0 0111235689999
Q ss_pred eeeeecCCCC-----ccccccccccccc-CcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 012353 165 VVMLVGPDAP-----VAFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSL 238 (465)
Q Consensus 165 ~A~Ll~~~~~-----~~~~~~~~~~~~~-~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (465)
+|+||.+.+. ..+...+.++... +......| ..++. ....+++..+++. |+++
T Consensus 251 aavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p-------~~~~~--------~~~~ai~~al~~A------gl~~ 309 (427)
T 3ho9_A 251 GMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSP-------PENGA--------GAALAMANALRDA------GIEA 309 (427)
T ss_dssp EEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBC-------CTTCH--------HHHHHHHHHHHHH------TCCG
T ss_pred EEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCC-------CCCHH--------HHHHHHHHHHHHc------CCCH
Confidence 9999987421 0000112222211 11112222 12232 2223444455554 7999
Q ss_pred CCCceeeccCCchHHHHHH
Q 012353 239 SNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 239 ~did~~~~H~p~~km~~~~ 257 (465)
+|||++..|..++......
T Consensus 310 ~dId~ve~HgtgT~~~d~~ 328 (427)
T 3ho9_A 310 SQIGYVNAHGTSTPAGDKA 328 (427)
T ss_dssp GGCCEEECCCCSCHHHHHH
T ss_pred HHccEEEecCCcCCCcCHH
Confidence 9999999997666654443
No 54
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=99.62 E-value=1.2e-14 Score=148.63 Aligned_cols=97 Identities=12% Similarity=0.105 Sum_probs=89.2
Q ss_pred CCCCHHHHHHHHHHHHHHHC-CCCcCCccEEEEEeecCCCC-cccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHH
Q 012353 49 EVEDVISMSLTAVTNLLEKY-KIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFN 126 (465)
Q Consensus 49 ~~Ed~~~la~~Aa~~aL~~a-gi~~~~Id~li~~T~s~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~ 126 (465)
.+++..+|+++|++++|+++ |+++++||.|++++.++... .+..+..++..+|+ ...+++++++.+|++++.||.+
T Consensus 23 ~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl--~~~~p~~~v~~aCss~l~Al~~ 100 (387)
T 3goa_A 23 RNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEI--PHSVPAVTVNRLCGSSMQALHD 100 (387)
T ss_dssp TTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTC--CTTSCCEEEECGGGHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCC--CCCCcEeEecCcchHHHHHHHH
Confidence 36789999999999999999 99999999999999988765 67899999999997 5578999999999999999999
Q ss_pred HHHHHHcCCCCCCEEEEEEeccc
Q 012353 127 CVNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 127 A~~~l~sg~~~~~~aLVVasD~~ 149 (465)
|..+|++|.+ +.|||+++|..
T Consensus 101 A~~~I~sG~~--d~vLv~G~e~~ 121 (387)
T 3goa_A 101 AARMIMTGDA--QVCLVGGVEHM 121 (387)
T ss_dssp HHHHHHTTSC--SEEEEEEEECT
T ss_pred HHHHHhCCCC--CEEEEEEEecC
Confidence 9999999977 99999999854
No 55
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=99.60 E-value=1.5e-13 Score=143.16 Aligned_cols=229 Identities=14% Similarity=0.060 Sum_probs=146.7
Q ss_pred CceeEEeEEEEecCCceechHHHHHhc--CCCh----hhhh-hhhcCeEEecCC----------------------CCCC
Q 012353 2 AKNVGILAMDIYFPPTCVQQEALEAHD--GASK----GKYT-IGLGQECMAFCS----------------------EVED 52 (465)
Q Consensus 2 ~~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~~-~Gig~r~~av~~----------------------~~Ed 52 (465)
.+.|-|.++++.+|-- .+.+++.+.. |.+. .++. .++..+.-...+ .-+.
T Consensus 23 ~~~v~ItG~g~~~P~g-~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~g~v~~~~~~~~~~fd~~~~i~~~~~~~~d~ 101 (451)
T 4ddo_A 23 TLRVVVTGIGIVSPLG-CGKELVWQRLIGGGSGLRRLGDDIAGELSAKVGGTVQDVAEDPEGGFDPERSVPHKELRKMDR 101 (451)
T ss_dssp -CCEEEEEEEEEETTE-ESHHHHHHHHHTTCCCEEECCHHHHTTSSCCEEECCCCTTTCTTTCCCGGGTSCHHHHTTSCH
T ss_pred CCCEEEEEeEEECCCC-CCHHHHHHHHHcCCCeeeeCCccccccccCccceEccccccccccccchhhhCCHHHHhhCCH
Confidence 3479999999999987 4677665543 2221 1110 111111111111 1123
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCc-c----EEEEEeecCC--------------------------CCcccHHHHHHHHhc
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQI-G----RLEVGSETVI--------------------------DKSKSIKTFLMQIFE 101 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~I-d----~li~~T~s~~--------------------------~~~ps~a~~l~~~LG 101 (465)
...|+++|++++|+++|+++++| | .|+++|.++. ...+..+..|+..||
T Consensus 102 ~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 181 (451)
T 4ddo_A 102 FIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHR 181 (451)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHhc
Confidence 57899999999999999999999 7 6888876421 123457889999999
Q ss_pred ccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-------c---------------------cC
Q 012353 102 KFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------Y---------------------AE 153 (465)
Q Consensus 102 l~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y---------------------~~ 153 (465)
+ . .+++++..+|++++.||..|..+|++|.+ +.|||+++|... + ..
T Consensus 182 l---~-Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~--d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~ 255 (451)
T 4ddo_A 182 F---R-GPLGCPVTACAASVQAIGDAMRMIRTGEA--DVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFDR 255 (451)
T ss_dssp C---C-SCEECCCCGGGHHHHHHHHHHHHHHHTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGSCCTTBT
T ss_pred C---C-CceeeecCccHHHHHHHHHHHHHHHCCCC--CEEEEeccccccCHHHHHHHHHHhhhccCCCcCcccccccccc
Confidence 7 2 26889999999999999999999999987 999999999842 0 00
Q ss_pred CCCCcccccceeeeeecCCCC-----ccccccccccccc-CcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHH
Q 012353 154 GPARPTGGAAAVVMLVGPDAP-----VAFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSK 227 (465)
Q Consensus 154 ~~~~~t~GdGA~A~Ll~~~~~-----~~~~~~~~~~~~~-~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~ 227 (465)
..+..++||||+|+||.+.+. ..+...+.++... +...+.. |..++. ....+++..+++
T Consensus 256 ~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~-------~~~~~~--------~~~~ai~~al~~ 320 (451)
T 4ddo_A 256 DRDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTA-------GPDDGS--------GAMRAMKLALRM 320 (451)
T ss_dssp TCCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSC-------CCTTCH--------HHHHHHHHHHHH
T ss_pred CCCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCC-------CCCCHH--------HHHHHHHHHHHH
Confidence 112346899999999987421 0000012222221 1111111 112232 222344445555
Q ss_pred hhhhhcCCCCCCCCceeeccCCchHHHHHHH
Q 012353 228 YEKLEGKQFSLSNADYFVFHSPYNKLVQKSF 258 (465)
Q Consensus 228 ~~~~~~~~~~~~did~~~~H~p~~km~~~~~ 258 (465)
. |++++|||++.+|..++.+.+...
T Consensus 321 A------gl~~~dId~ve~Hgtgt~~~d~~E 345 (451)
T 4ddo_A 321 G------DVAPEQVDYVNAHATSTPVGDAGE 345 (451)
T ss_dssp H------TCCGGGCCEEECCCCSCHHHHHHH
T ss_pred c------CCCHHHcCEEEecCCcCcccCHHH
Confidence 4 799999999999999988776543
No 56
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=99.60 E-value=4.7e-14 Score=144.64 Aligned_cols=96 Identities=9% Similarity=0.055 Sum_probs=87.9
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~ 129 (465)
+++..+|+++|++++|+++|+++++||.+++++.++....+..+.+|+..||+ ....+++++..+|++++.||..|..
T Consensus 27 ~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl--~~~~p~~~v~~aCaSg~~Ai~~A~~ 104 (397)
T 1wl4_A 27 AVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGI--PYSVPAWSCQMICGSGLKAVCLAVQ 104 (397)
T ss_dssp TSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTC--CTTSCEEEECCGGGHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCC--CCCccEEEecCcChhHHHHHHHHHH
Confidence 67889999999999999999999999999999988766667899999999997 4468899999999999999999999
Q ss_pred HHHcCCCCCCEEEEEEeccc
Q 012353 130 WVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVasD~~ 149 (465)
+|++|.+ +.|||+++|..
T Consensus 105 ~I~~G~~--d~vlagG~e~~ 122 (397)
T 1wl4_A 105 SIGIGDS--SIVVAGGMENM 122 (397)
T ss_dssp HHHTTSC--SEEEEEEEEES
T ss_pred HHHCCCC--CEEEEEEEeec
Confidence 9999977 99999999864
No 57
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=99.60 E-value=5.2e-14 Score=144.46 Aligned_cols=97 Identities=8% Similarity=0.132 Sum_probs=89.1
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCC-cccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHH
Q 012353 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (465)
Q Consensus 49 ~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A 127 (465)
.+++..+|+++|++++|+++|+++++||.|++++.++... .+..+..|+..||+ ..+.++++++++|++++.||..|
T Consensus 22 ~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl--~~~~p~~~v~~aCas~~~Al~~A 99 (401)
T 1ulq_A 22 ASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGF--PVEVAGCTVNRLCGSGLEAVAQA 99 (401)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTC--CTTCEEEEEECGGGHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCC--CCCccEeeccccchHHHHHHHHH
Confidence 5788999999999999999999999999999999887665 57899999999997 45789999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEEeccc
Q 012353 128 VNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~ 149 (465)
..+|++|.+ +.|||+++|..
T Consensus 100 ~~~I~~G~~--d~vLv~G~e~~ 119 (401)
T 1ulq_A 100 ARAIWAGEG--KVYIGSGVESM 119 (401)
T ss_dssp HHHHHTTSC--SEEEEEEEEES
T ss_pred HHHHHCCCC--CEEEEEEEeec
Confidence 999999977 99999999864
No 58
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=99.59 E-value=3.3e-13 Score=140.07 Aligned_cols=227 Identities=13% Similarity=0.118 Sum_probs=145.3
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc--CCCh----hhhh-hhhcCeEEecCC--------------------CCCCHHH
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD--GASK----GKYT-IGLGQECMAFCS--------------------EVEDVIS 55 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~~-~Gig~r~~av~~--------------------~~Ed~~~ 55 (465)
++|-|.++++.+|.- .+.+++.+.. |.+. .++. .++-.+.....+ .-.....
T Consensus 21 ~~v~ItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~d~~~~ 99 (438)
T 2iwz_A 21 RRVVITGIGLVTPLG-VGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEGQFNEQNFVSKSDIKSMSSPTI 99 (438)
T ss_dssp CCEEEEEEEEEETTE-ESHHHHHHHHHTTCCCEEECCSGGGTTSSCCEEECCCBSSSTTSBCGGGTSCHHHHTTSCHHHH
T ss_pred CCEEEEeeeEECCCC-CCHHHHHHHHHcCCCccccCCchhcccCccceeeeeccccccccCChhhcCCHHHHHhcCHHHH
Confidence 469999999999977 5777765543 2211 0110 011111111110 0122578
Q ss_pred HHHHHHHHHHHHCCCCc-CCcc----EEEEEeecCCC-----------------C--------cc-cHHHHHHHHhcccC
Q 012353 56 MSLTAVTNLLEKYKIDP-KQIG----RLEVGSETVID-----------------K--------SK-SIKTFLMQIFEKFG 104 (465)
Q Consensus 56 la~~Aa~~aL~~agi~~-~~Id----~li~~T~s~~~-----------------~--------~p-s~a~~l~~~LGl~g 104 (465)
|+++|++++|+++|+++ ++|| .|+++|.++.. . .+ .++.+|+..||+
T Consensus 100 l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl-- 177 (438)
T 2iwz_A 100 MAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKL-- 177 (438)
T ss_dssp HHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhCC--
Confidence 99999999999999998 8887 58888876532 1 12 478899999997
Q ss_pred CCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc-c-c-----------c-----CC--------CCCc
Q 012353 105 NTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V-Y-----------A-----EG--------PARP 158 (465)
Q Consensus 105 ~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~-y-----------~-----~~--------~~~~ 158 (465)
.. +++++.++|++++.||..|..+|++|.+ +.|||+++|.. . + . .. ....
T Consensus 178 -~g-p~~~v~taCsS~l~Al~~A~~~I~~G~~--d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pfd~~~~G~ 253 (438)
T 2iwz_A 178 -KG-PNHAVSTACTTGAHAVGDSFRFIAHGDA--DVMVAGGTDSCISPLSLAGFSRARALSTNSDPKLACRPFHPKRDGF 253 (438)
T ss_dssp -CS-CEECBCCGGGHHHHHHHHHHHHHHHTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCCSCTTTSCCTTCTTCCSB
T ss_pred -CC-ceeeecCchhHHHHHHHHHHHHHHcCCC--CEEEEEeeehhcCHHHHHHHHhcCCcCCCCCCCcccccCCCCCCCE
Confidence 22 6889999999999999999999999977 99999999963 1 0 0 01 1235
Q ss_pred ccccceeeeeecCCCCc-----cccccccccccc-CcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhh
Q 012353 159 TGGAAAVVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLE 232 (465)
Q Consensus 159 t~GdGA~A~Ll~~~~~~-----~~~~~~~~~~~~-~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~ 232 (465)
.+||||+|+||++.+.. .+...+.++... +...+..|. .++. ....+++..+++.
T Consensus 254 ~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~-------~~~~--------~~~~ai~~Al~~A---- 314 (438)
T 2iwz_A 254 VMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPD-------PEGE--------GALRCMAAALKDA---- 314 (438)
T ss_dssp CBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCC-------TTCH--------HHHHHHHHHHHHH----
T ss_pred EeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCC-------CCHH--------HHHHHHHHHHHHc----
Confidence 68999999999864210 000012222211 111122221 2232 2233444454554
Q ss_pred cCCCCCCCCceeeccCCchHHHHHH
Q 012353 233 GKQFSLSNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 233 ~~~~~~~did~~~~H~p~~km~~~~ 257 (465)
|++++|||++..|+.++.+.+.+
T Consensus 315 --gl~p~dId~ve~HgtgT~~gD~~ 337 (438)
T 2iwz_A 315 --GVQPEEISYINAHATSTPLGDAA 337 (438)
T ss_dssp --TCCGGGCCEEECCCCSCHHHHHH
T ss_pred --CCCHHHcCEEEecCCCCcccCHH
Confidence 79999999999999999876644
No 59
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=99.59 E-value=4e-14 Score=144.87 Aligned_cols=96 Identities=8% Similarity=0.051 Sum_probs=87.2
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~ 129 (465)
+++..+|+++|++++|+++|+++++||.+++++.++....+..+..|+..||+ ....+++.+..+|++++.||..|..
T Consensus 24 ~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl--~~~~p~~~v~~aCaSgl~Al~~A~~ 101 (392)
T 2vu1_A 24 NTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGV--PQEATAWGMNQLCGSGLRAVALGMQ 101 (392)
T ss_dssp TCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTC--CTTSEEEEEECGGGHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCC--CCCceEEEecccchHHHHHHHHHHH
Confidence 67899999999999999999999999999999888766567899999999998 3347899999999999999999999
Q ss_pred HHHcCCCCCCEEEEEEeccc
Q 012353 130 WVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVasD~~ 149 (465)
+|++|.+ +.|||+++|..
T Consensus 102 ~I~~G~~--d~vlvgG~e~~ 119 (392)
T 2vu1_A 102 QIATGDA--SIIVAGGMESM 119 (392)
T ss_dssp HHHTTSC--SCEEEEEEEES
T ss_pred HHHCCCC--CEEEEEEEecc
Confidence 9999977 99999999864
No 60
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=99.59 E-value=5.1e-13 Score=137.55 Aligned_cols=225 Identities=12% Similarity=0.096 Sum_probs=145.8
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc--CCC---h-hhhh-h-hhcCeEEecCC----C----------CCCHHHHHHHH
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD--GAS---K-GKYT-I-GLGQECMAFCS----E----------VEDVISMSLTA 60 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~---~-~k~~-~-Gig~r~~av~~----~----------~Ed~~~la~~A 60 (465)
++|-|.++++.+|-- .+.+++.+.. |.+ + ..+. . ++..+.....+ . -.....|+++|
T Consensus 6 ~~v~ItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~a 84 (412)
T 4ewg_A 6 KRVVITGMGGVTALG-SRWDEIEAALKAGRNAVRRMPDWDYFESLHTRLAAPLPGFAQPADWPRKKTRSMGRVSMYAVRA 84 (412)
T ss_dssp CCEEEEEEEEEBTTB-SSHHHHHHHHHHTCCCCEECGGGGGSSSCCCCEEBCCSCCCCCTTSCHHHHTTCCHHHHHHHHH
T ss_pred CEEEEEeeEEECCCc-CCHHHHHHHHHcCCCceeeCCccccccCCccceeeecCCCChhhhCCHHHHhhCCHHHHHHHHH
Confidence 469999999999986 4677665543 322 1 0111 0 11111111110 0 12256799999
Q ss_pred HHHHHHHCCC-CcCCcc----EEEEEeecCC--------------------------CCcccHHHHHHHHhcccCCCCce
Q 012353 61 VTNLLEKYKI-DPKQIG----RLEVGSETVI--------------------------DKSKSIKTFLMQIFEKFGNTDIE 109 (465)
Q Consensus 61 a~~aL~~agi-~~~~Id----~li~~T~s~~--------------------------~~~ps~a~~l~~~LGl~g~~~~~ 109 (465)
++++|+++|+ ++++|| .++++|.++. ...+.++..|+..||+ . .+
T Consensus 85 a~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl---~-gp 160 (412)
T 4ewg_A 85 SELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDL---K-GR 160 (412)
T ss_dssp HHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTTC---C-SC
T ss_pred HHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhCC---C-CC
Confidence 9999999999 778888 7888876632 1124578899999997 2 36
Q ss_pred eEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc------cc------C--------------CCCCcccccc
Q 012353 110 GVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV------YA------E--------------GPARPTGGAA 163 (465)
Q Consensus 110 ~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~------y~------~--------------~~~~~t~GdG 163 (465)
++.+..+|++++.||..|..+|++|.+ +.|||+++|... +. . ..+...+|||
T Consensus 161 ~~~v~~aCsS~l~Al~~A~~~I~~G~~--d~~LvgG~e~~s~~~~~~~~~~~~l~~~~~~p~~~~rpfd~~~~G~~~geG 238 (412)
T 4ewg_A 161 IVPTSSACASGSQAIGYAYENIAMGKQ--TLMLAGGAEELSGPAVAVFDTLYATSTRNDEPHLTPRPFDAKRDGLVVGEG 238 (412)
T ss_dssp EEECCCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCHHHHHHHHTTTCBCCCTTCGGGCCCTTBTTCCCBCBBCE
T ss_pred cccccchhHHHHHHHHHHHHHHHcCCC--CEEEEeccccCCHHHHHHHHHhhccccCCCCCCCCCCCCCCCCCCCceECe
Confidence 889999999999999999999999987 999999999752 10 0 0112458999
Q ss_pred eeeeeecCCCC-----ccccccccccccc-CcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 012353 164 AVVMLVGPDAP-----VAFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFS 237 (465)
Q Consensus 164 A~A~Ll~~~~~-----~~~~~~~~~~~~~-~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 237 (465)
|+|+||.+.+. ..+...+.|+... +...+..| ++ .....+++..+++. |++
T Consensus 239 AaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p---------~~--------~~~~~ai~~Al~~A------gl~ 295 (412)
T 4ewg_A 239 AATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQP---------TA--------STMARAMQLALEDA------KLD 295 (412)
T ss_dssp EEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSC---------CH--------HHHHHHHHHHHHHT------TCC
T ss_pred EEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCC---------CH--------HHHHHHHHHHHHHc------CCC
Confidence 99999987421 0011112222221 11112222 11 23334555555554 799
Q ss_pred CCCCceeeccCCchHHHHHH
Q 012353 238 LSNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 238 ~~did~~~~H~p~~km~~~~ 257 (465)
++|||++..|..++.+.+..
T Consensus 296 ~~dId~ve~Hgtgt~~~D~~ 315 (412)
T 4ewg_A 296 ANAIAYVNAHGTSTDRGDVA 315 (412)
T ss_dssp GGGEEEEECCCCCCHHHHHH
T ss_pred HHHCCEEEccCCCCccccHH
Confidence 99999999999999877654
No 61
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=99.58 E-value=1.1e-13 Score=143.26 Aligned_cols=172 Identities=15% Similarity=0.131 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHHHHCCCCcCC-cc----EEEEEeecC--------------------------CCCcccHHHHHHHHhc
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQ-IG----RLEVGSETV--------------------------IDKSKSIKTFLMQIFE 101 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~-Id----~li~~T~s~--------------------------~~~~ps~a~~l~~~LG 101 (465)
...|+++|++++|+++|+++++ || .++++|..+ ....+..+..|+..||
T Consensus 87 ~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 166 (428)
T 3kzu_A 87 FIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHK 166 (428)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHHcC
Confidence 5789999999999999999998 87 577777532 2233457889999999
Q ss_pred ccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-------------ccC---------------
Q 012353 102 KFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------------YAE--------------- 153 (465)
Q Consensus 102 l~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------------y~~--------------- 153 (465)
+. .+++.+..+|++++.||..|..+|++|.+ +.|||+++|... ...
T Consensus 167 l~----Gp~~~v~taCsS~l~Al~~A~~~I~~G~~--d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~ 240 (428)
T 3kzu_A 167 LR----GPNHSVVTACATGTHAIGDAARLIAFGDA--DVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDE 240 (428)
T ss_dssp CC----SCEECBCCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGTCCTTBT
T ss_pred CC----CceeeecCccHHHHHHHHHHHHHHHCCCC--CEEEEeeecCcCCHHHHHHHHHccccccCccCCcccccCCccc
Confidence 72 26788999999999999999999999987 999999999720 000
Q ss_pred CCCCcccccceeeeeecCCCCc-----cccccccccccc-CcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHH
Q 012353 154 GPARPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSK 227 (465)
Q Consensus 154 ~~~~~t~GdGA~A~Ll~~~~~~-----~~~~~~~~~~~~-~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~ 227 (465)
..+..++||||+|+||.+.+.. .+...+.++... +...... |..++. ....+++..+++
T Consensus 241 ~~~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~-------p~~~~~--------~~~~ai~~al~~ 305 (428)
T 3kzu_A 241 DRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITA-------PTESGE--------GAQRCMVAALKR 305 (428)
T ss_dssp TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSS-------CCTTCH--------HHHHHHHHHHHH
T ss_pred CCCceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCC-------CCCCHH--------HHHHHHHHHHHH
Confidence 0123468999999999874210 000012222211 1111112 222332 222344445555
Q ss_pred hhhhhcCCCCCCCCceeeccCCch
Q 012353 228 YEKLEGKQFSLSNADYFVFHSPYN 251 (465)
Q Consensus 228 ~~~~~~~~~~~~did~~~~H~p~~ 251 (465)
. |++++|||++..|..++
T Consensus 306 A------gl~~~dId~ve~HgtgT 323 (428)
T 3kzu_A 306 A------GIVPDEIDYINAHGTST 323 (428)
T ss_dssp H------TCCGGGCCEEECCCCSS
T ss_pred c------CCCHHHeeEEEecCCcc
Confidence 4 79999999999994444
No 62
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=99.55 E-value=3.7e-13 Score=137.84 Aligned_cols=97 Identities=9% Similarity=0.026 Sum_probs=88.6
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHH
Q 012353 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (465)
Q Consensus 49 ~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~ 128 (465)
.+++..+|+++|++++|+++|+++++||.+++++.++....+..+..|+..||+ ..+.+++++..+|++++.||..|.
T Consensus 28 ~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl--~~~~p~~~v~~aCaS~~~Al~~A~ 105 (395)
T 2ib8_A 28 SLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGL--PISTPCTTINKVCASGMKAIMMAS 105 (395)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTC--CTTCCEEEEECGGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCC--CCCceEEEecccccHHHHHHHHHH
Confidence 358899999999999999999999999999999988777678899999999997 456889999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEEeccc
Q 012353 129 NWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 129 ~~l~sg~~~~~~aLVVasD~~ 149 (465)
.+|++|.+ +.|||+++|..
T Consensus 106 ~~I~~G~~--d~vlvgG~e~~ 124 (395)
T 2ib8_A 106 QSLMCGHQ--DVMVAGGMESM 124 (395)
T ss_dssp HHHHTTSC--SEEEEEEEEEG
T ss_pred HHHHCCCC--CEEEEEeeecc
Confidence 99999977 99999999853
No 63
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=99.55 E-value=3.1e-12 Score=132.52 Aligned_cols=226 Identities=11% Similarity=0.059 Sum_probs=142.6
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc--CCCh----hhhh---hhhcCeEEecCCCC-------------CCHHHHHHHH
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD--GASK----GKYT---IGLGQECMAFCSEV-------------EDVISMSLTA 60 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~~---~Gig~r~~av~~~~-------------Ed~~~la~~A 60 (465)
++|-|.++++.+|--. +.+++.+.. |.+. .++. .++..+.-.+.+++ .....|+++|
T Consensus 28 ~~vaI~G~g~~~p~g~-~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~d~~~~l~l~a 106 (434)
T 2gp6_A 28 PYVVVTGIAMTTALAT-DAETTWKLLLDRQSGIRTLDDPFVEEFDLPVRIGGHLLEEFDHQLTRIELRRMGYLQRMSTVL 106 (434)
T ss_dssp CCEEEEEEEEECSSCS-SHHHHHHHHHTTCCCEEECCCHHHHHHCCSCCEEECCSCCSTTSSCHHHHHTCCHHHHHHHHH
T ss_pred CCEEEEeeEEeCCCCC-CHHHHHHHHHcCCCeeeeCCccccccccCccceeEEcCCchhhhCCHHHHHhCCHHHHHHHHH
Confidence 4699999999999885 777765543 3221 1111 12222221221111 1247899999
Q ss_pred HHHHHHHCCCC---cCCccEEEEEeecCCC-----------------Ccc---------cHHHHHHHHhcccCCCCceeE
Q 012353 61 VTNLLEKYKID---PKQIGRLEVGSETVID-----------------KSK---------SIKTFLMQIFEKFGNTDIEGV 111 (465)
Q Consensus 61 a~~aL~~agi~---~~~Id~li~~T~s~~~-----------------~~p---------s~a~~l~~~LGl~g~~~~~~~ 111 (465)
++++|+++|++ +++|+ |+++|.++.+ ..| .++.+|+..||+ . .+++
T Consensus 107 a~~ALedAG~~~~~~~~ig-v~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl---~-Gp~~ 181 (434)
T 2gp6_A 107 SRRLWENAGSPEVDTNRLM-VSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHA---K-AGVM 181 (434)
T ss_dssp HHHHHHHTTCCCCCTTSEE-EEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCC---C-SCEE
T ss_pred HHHHHHhcCCCccCCCceE-EEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcC---C-CCeE
Confidence 99999999984 55665 6777776543 111 468899999997 2 4679
Q ss_pred eecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-------------ccC-------C--------CCCcccccc
Q 012353 112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------------YAE-------G--------PARPTGGAA 163 (465)
Q Consensus 112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------------y~~-------~--------~~~~t~GdG 163 (465)
++.++|++++.||..|..+|++|.+ +.|||+++|... ... + .+...+|||
T Consensus 182 ~v~~aCsS~l~Al~~A~~~I~~G~~--d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~~g~v~gdG 259 (434)
T 2gp6_A 182 TPVSACASGAEAIARAWQQIVLGEA--DAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDGFVFGEG 259 (434)
T ss_dssp CEECGGGHHHHHHHHHHHHHHHTSC--SEEEEEEECCCCCHHHHHHHHTTTSSCCCCTTCTTTSCCSSBTTCCCCCBBCC
T ss_pred EeCCCCcHHHHHHHHHHHHHHcCCC--CEEEEeeeccccCHHHHHHHHHHHHHhcCCCCCCCCceecccccCCCcceecc
Confidence 9999999999999999999999977 999999999741 100 0 112468999
Q ss_pred eeeeeecCCCC-----cccccccccccc-cCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 012353 164 AVVMLVGPDAP-----VAFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFS 237 (465)
Q Consensus 164 A~A~Ll~~~~~-----~~~~~~~~~~~~-~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 237 (465)
|+|+||.+.+. ..+...+.++.. .+...+..|. .++ .....+++..+++. |++
T Consensus 260 AaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~-------~~~--------~~~~~ai~~al~~A------gl~ 318 (434)
T 2gp6_A 260 GALLLIETEEHAKARGANILARIMGASITSDGFHMVAPD-------PNG--------ERAGHAITRAIQLA------GLA 318 (434)
T ss_dssp EEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCC-------TTC--------HHHHHHHHHHHHHT------TCC
T ss_pred eEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCC-------CCh--------HHHHHHHHHHHHHc------CCC
Confidence 99999986421 000001222221 1111122221 122 12333445555554 799
Q ss_pred CCCCceeeccCCchHHHHHH
Q 012353 238 LSNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 238 ~~did~~~~H~p~~km~~~~ 257 (465)
++|||++.+|...+.+.+.+
T Consensus 319 ~~dId~ve~Hgtgt~~~D~~ 338 (434)
T 2gp6_A 319 PGDIDHVNAHATGTQVGDLA 338 (434)
T ss_dssp TTTEEEEECCCCSCHHHHHH
T ss_pred HHHcCEEEEeCCcCccchHH
Confidence 99999999998777765443
No 64
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=99.55 E-value=3.8e-13 Score=139.29 Aligned_cols=178 Identities=13% Similarity=0.094 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHHHCCC-CcCCcc----EEEEEeecCC-----------------CCc---------ccHHHHHHHHhc
Q 012353 53 VISMSLTAVTNLLEKYKI-DPKQIG----RLEVGSETVI-----------------DKS---------KSIKTFLMQIFE 101 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi-~~~~Id----~li~~T~s~~-----------------~~~---------ps~a~~l~~~LG 101 (465)
...|+++|++++|+++|+ ++++|| .|++++.++. ... ..++.+|+..||
T Consensus 88 ~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 167 (431)
T 2ix4_A 88 FIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYG 167 (431)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHHC
Confidence 458999999999999999 988888 5777776542 111 247889999999
Q ss_pred ccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc-------------c---------------C
Q 012353 102 KFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY-------------A---------------E 153 (465)
Q Consensus 102 l~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y-------------~---------------~ 153 (465)
+ . .+++++.++|++++.||..|..+|++|.+ +.|||+++|...- . .
T Consensus 168 l---~-gp~~~v~taCsS~l~Al~~A~~~I~~G~~--d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~ 241 (431)
T 2ix4_A 168 F---Q-GPNHAAVTACATGAHSIGDATRMIQFGDA--DVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDC 241 (431)
T ss_dssp C---C-SCEECBCCGGGHHHHHHHHHHHHHHHTSC--SEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCTTBT
T ss_pred C---C-CceeCccChhHHHHHHHHHHHHHHHcCCC--CEEEEeeeccccCHHHHHHHHhccccCccccCCcccccccCCC
Confidence 7 2 26799999999999999999999999977 9999999996410 0 0
Q ss_pred CCCCcccccceeeeeecCCCCc-----cccccccccccc-CcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHH
Q 012353 154 GPARPTGGAAAVVMLVGPDAPV-----AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSK 227 (465)
Q Consensus 154 ~~~~~t~GdGA~A~Ll~~~~~~-----~~~~~~~~~~~~-~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~ 227 (465)
..+..++||||+|+||.+.+.. .+...+.++... +...+..|. .++ .....+++..+++
T Consensus 242 ~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~-------~~~--------~~~~~ai~~al~~ 306 (431)
T 2ix4_A 242 DRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPP-------EDG--------KGAVLAMTRALRQ 306 (431)
T ss_dssp TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCC-------TTC--------HHHHHHHHHHHHH
T ss_pred CCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCC-------CCH--------HHHHHHHHHHHHH
Confidence 1123568999999999864210 000012222211 111122221 122 1233344555555
Q ss_pred hhhhhcCCCCCCCCceeeccCCchHHHHHH
Q 012353 228 YEKLEGKQFSLSNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 228 ~~~~~~~~~~~~did~~~~H~p~~km~~~~ 257 (465)
. |++++|||++..|..++.+.+.+
T Consensus 307 a------gl~~~dId~ve~HgtgT~~~D~~ 330 (431)
T 2ix4_A 307 S------GLCPNQIDYVNAHATSTPIGDAV 330 (431)
T ss_dssp H------TCCGGGCCEEECCCCSCHHHHHH
T ss_pred c------CCCHHHcCEEEEeCCcCcccCHH
Confidence 4 79999999999999998876654
No 65
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=99.54 E-value=2.6e-13 Score=138.84 Aligned_cols=97 Identities=11% Similarity=0.110 Sum_probs=88.9
Q ss_pred CCCCHHHHHHHHHHHHHHHCC----CCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeecCcChhHHHHH
Q 012353 49 EVEDVISMSLTAVTNLLEKYK----IDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAAL 124 (465)
Q Consensus 49 ~~Ed~~~la~~Aa~~aL~~ag----i~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL 124 (465)
.+++..+|+++|++++|+++| +++++||.|++++.++....+..+.+|+..||+ ..+.++++++.+|++++.||
T Consensus 31 ~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~va~~lGl--~~~~p~~~v~~aCasg~~Al 108 (393)
T 1afw_A 31 KDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGI--PYSTPFVALNRQCSSGLTAV 108 (393)
T ss_dssp TTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTC--CTTSCEEEEECGGGHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHHHHHcCC--CCCceEEEEcCcCHHHHHHH
Confidence 478899999999999999999 999999999999988876667889999999997 45788999999999999999
Q ss_pred HHHHHHHHcCCCCCCEEEEEEeccc
Q 012353 125 FNCVNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 125 ~~A~~~l~sg~~~~~~aLVVasD~~ 149 (465)
..|..+|++|.+ +.|||+++|..
T Consensus 109 ~~A~~~I~~G~~--d~vLv~G~e~~ 131 (393)
T 1afw_A 109 NDIANKIKVGQI--DIGLALGVESM 131 (393)
T ss_dssp HHHHHHHHTTSC--SEEEEEEEEEH
T ss_pred HHHHHHHHCCCC--CEEEEEEEEec
Confidence 999999999977 99999999853
No 66
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.53 E-value=6e-13 Score=137.12 Aligned_cols=223 Identities=12% Similarity=-0.010 Sum_probs=144.9
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc--CCCh----hhhh-hhhcCeEEecC---------CCC-----CCHHHHHHHHH
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD--GASK----GKYT-IGLGQECMAFC---------SEV-----EDVISMSLTAV 61 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~~-~Gig~r~~av~---------~~~-----Ed~~~la~~Aa 61 (465)
+.|-|.+++..+|.-. +.+++.+.. |.+. .++. .++..+.-... ++. .....|+++|+
T Consensus 9 ~~v~I~G~g~~~p~g~-~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~d~~~~l~l~aa 87 (415)
T 1tqy_B 9 KSVLITGVGVVAPNGL-GLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPGRLLPQTDPSTRLALTAA 87 (415)
T ss_dssp -CEEEEEEEEEETTEE-SHHHHHHHHHTTCCCEEECTTTTGGGSSCCEEECCCSCCHHHHSCTTTGGGCCHHHHHHHHHH
T ss_pred CCEEEEeeEEECCCCC-CHHHHHHHHHcCCCcEEECCcccccCCCcceEEEeCCCCchhcCCHHHHHhcCHHHHHHHHHH
Confidence 4699999999999885 777665542 2211 1110 11111111110 111 12578999999
Q ss_pred HHHHHHCCCCcCCcc----EEEEEeecCCC--------------------------CcccHHHHHHHHhcccCCCCceeE
Q 012353 62 TNLLEKYKIDPKQIG----RLEVGSETVID--------------------------KSKSIKTFLMQIFEKFGNTDIEGV 111 (465)
Q Consensus 62 ~~aL~~agi~~~~Id----~li~~T~s~~~--------------------------~~ps~a~~l~~~LGl~g~~~~~~~ 111 (465)
+++|+++|+++++|| .|+++|.++.. ..+.++.+|+..||+. .+++
T Consensus 88 ~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~----gp~~ 163 (415)
T 1tqy_B 88 DWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMR----GPSS 163 (415)
T ss_dssp HHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCC----SSCE
T ss_pred HHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhCCC----CceE
Confidence 999999999999999 89999875532 1356788999999982 3678
Q ss_pred eecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc-c------------cc----C---------CCCCccccccee
Q 012353 112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------------YA----E---------GPARPTGGAAAV 165 (465)
Q Consensus 112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~-~------------y~----~---------~~~~~t~GdGA~ 165 (465)
.+..+|++++.||..|..+|++| + +.|||+++|.. . .. . ......+||||+
T Consensus 164 ~v~~aCsS~l~Al~~A~~~I~~G-~--d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~pfd~~~~G~~~geGaa 240 (415)
T 1tqy_B 164 ALVAEQAGGLDALGHARRTIRRG-T--PLVVSGGVDSALDPWGWVSQIASGRISTATDPDRAYLPFDERAAGYVPGEGGA 240 (415)
T ss_dssp EEECGGGHHHHHHHHHHHHHHHT-C--SEEEEEEEECCCSHHHHHHHHTTSCBCCCSCGGGSCCTTSTTCCCBCBBCEEE
T ss_pred eecCCccHHHHHHHHHHHHHHcC-C--CEEEEeeecCcCCHHHHHHHHhccCccCCCCCCCCcCCCCCCCCCcceeeeEE
Confidence 89999999999999999999999 9 99999999983 1 01 0 011356899999
Q ss_pred eeeecCCCCc------cccccccccccc-CcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 012353 166 VMLVGPDAPV------AFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSL 238 (465)
Q Consensus 166 A~Ll~~~~~~------~~~~~~~~~~~~-~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (465)
|+||.+.+.. .+...+.|+... +...+..|. . +. .+ +++..+++. |+++
T Consensus 241 avvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~-------~-~~------~~----ai~~al~~A------gl~~ 296 (415)
T 1tqy_B 241 ILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRP-------A-GL------ER----AIRLALNDA------GTGP 296 (415)
T ss_dssp EEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCC-------C-SH------HH----HHHHHHHHH------TCCG
T ss_pred EEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCC-------H-HH------HH----HHHHHHHHc------CCCH
Confidence 9999864210 000012222211 111122232 1 21 12 334444444 7999
Q ss_pred CCCceeeccCCchHHHHHH
Q 012353 239 SNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 239 ~did~~~~H~p~~km~~~~ 257 (465)
+|||++..|..++++.+.+
T Consensus 297 ~dId~ve~Hgtgt~~~D~~ 315 (415)
T 1tqy_B 297 EDVDVVFADGAGVPELDAA 315 (415)
T ss_dssp GGCCEEECCCCCSHHHHHH
T ss_pred hHCCEEEEeCCCCcCcCHH
Confidence 9999999999999877654
No 67
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=99.53 E-value=2.9e-13 Score=140.40 Aligned_cols=97 Identities=13% Similarity=0.158 Sum_probs=86.8
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCC-cccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHH
Q 012353 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (465)
Q Consensus 49 ~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A 127 (465)
.+++..+|+++|++++|+++|+++++||.|++++.++... .+..+..|+..||+ ....++++++.+|++++.||..|
T Consensus 51 ~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl--~~~~p~~~v~~aCaSg~~Al~~A 128 (442)
T 2wu9_A 51 KDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGF--PETVAVRTVNRQCSSGLQAVADV 128 (442)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTC--CTTSCEEEEECGGGHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCC--CCCceEEEeCCcCHHHHHHHHHH
Confidence 3788999999999999999999999999999998876542 35678899999997 45788999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEEeccc
Q 012353 128 VNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~ 149 (465)
..+|++|.+ +.|||+++|..
T Consensus 129 ~~~I~sG~~--d~vLvgG~e~~ 148 (442)
T 2wu9_A 129 AAAIKAGFY--DIGIGAGLESM 148 (442)
T ss_dssp HHHHHTTSC--SEEEEEEEEET
T ss_pred HHHHHCCCC--CEEEEEEEeec
Confidence 999999977 99999999864
No 68
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=99.53 E-value=2.9e-13 Score=138.36 Aligned_cols=96 Identities=14% Similarity=0.126 Sum_probs=87.1
Q ss_pred CCCHHHHHHHHHHHHHHHC-CCCcCCccEEEEEeecCCCC-cccHHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHH
Q 012353 50 VEDVISMSLTAVTNLLEKY-KIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (465)
Q Consensus 50 ~Ed~~~la~~Aa~~aL~~a-gi~~~~Id~li~~T~s~~~~-~ps~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A 127 (465)
+++..+|+++|++++|+++ |+++++||.|++++.++... .+..+.+|+..||+ ....+++++..+|++++.||..|
T Consensus 27 ~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl--~~~~p~~~v~~aCaS~~~Al~~A 104 (390)
T 1wdk_C 27 NTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQI--PHTSAAQTVSRLCGSSMSALHTA 104 (390)
T ss_dssp TCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSS--CTTSEEEEEECGGGHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCC--CCCccEEEEcccchhHHHHHHHH
Confidence 6789999999999999999 99999999999998887654 36789999999997 56788999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEEeccc
Q 012353 128 VNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~ 149 (465)
..+|++|.+ +.|||+++|..
T Consensus 105 ~~~I~~G~~--d~vlvgG~e~~ 124 (390)
T 1wdk_C 105 AQAIMTGNG--DVFVVGGVEHM 124 (390)
T ss_dssp HHHHHTTSC--SEEEEEEEEET
T ss_pred HHHHHcCCC--CEEEEeeeecc
Confidence 999999977 99999999964
No 69
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=99.52 E-value=3.5e-12 Score=131.94 Aligned_cols=224 Identities=13% Similarity=0.120 Sum_probs=144.9
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc--CCCh----hhh-hhhhcCeEEecC-------------CCCCCHHHHHHHHHH
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD--GASK----GKY-TIGLGQECMAFC-------------SEVEDVISMSLTAVT 62 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~-~~Gig~r~~av~-------------~~~Ed~~~la~~Aa~ 62 (465)
++|.|.++++.+|-- .+.+++.+.. |.+. ..+ ..++..+.-..+ ..-.....|++.|++
T Consensus 23 ~~V~ItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~~~fd~~~~i~~~~~~~~d~~~~l~~~aa~ 101 (428)
T 3mqd_A 23 RRVVVTGMGIVSSIG-SNTEEVTASLREAKSGISRAEEYAELGFRCQVHGAPDIDIESLVDRRAMRFHGRGTAWNHIAMD 101 (428)
T ss_dssp CCEEEEEEEEEBTTB-SSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEECCCCCHHHHSCTGGGTTCCHHHHHHHHHHH
T ss_pred CCEEEEeeEEECCCc-CCHHHHHHHHHcCCCcceeCCcccccCCCcccccccCCChhhcCCHHHHhhCCHHHHHHHHHHH
Confidence 369999999999987 4777665543 3221 011 112221111110 011236789999999
Q ss_pred HHHHHCCCCcCCcc----EEEEEeecCCCC--------------------------cccHHHHHHHHhcccCCCCceeEe
Q 012353 63 NLLEKYKIDPKQIG----RLEVGSETVIDK--------------------------SKSIKTFLMQIFEKFGNTDIEGVD 112 (465)
Q Consensus 63 ~aL~~agi~~~~Id----~li~~T~s~~~~--------------------------~ps~a~~l~~~LGl~g~~~~~~~d 112 (465)
++|+++|+++++|| .|+++|.++... .+.++..|+..||+ ..+++.
T Consensus 102 ~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl----~gp~~t 177 (428)
T 3mqd_A 102 QAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKI----KGINYS 177 (428)
T ss_dssp HHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTC----CSCEEC
T ss_pred HHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCC----CCceee
Confidence 99999999999998 688888765422 23578899999997 237889
Q ss_pred ecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc---------------------------cCCCCCccccccee
Q 012353 113 STNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY---------------------------AEGPARPTGGAAAV 165 (465)
Q Consensus 113 i~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y---------------------------~~~~~~~t~GdGA~ 165 (465)
+..+|++++.||..|..+|++|.+ +.|||+++|.... +...+..++||||+
T Consensus 178 v~~aCsSgl~Ai~~A~~~I~~G~~--d~alvgG~e~~s~~~~~~~~~~~~ls~~~~~~p~~~~rpfd~~~~G~v~gEGAa 255 (428)
T 3mqd_A 178 ISSACATSNHCIGNAYEMIQYGKQ--DRMFAGGCEDLDWTLSVLFDAMGAMSSKYNDTPSTASRAYDKNRDGFVIAGGAG 255 (428)
T ss_dssp CCCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCHHHHHHHHHTTCBCCTTTTSGGGSCCTTBTTCCSBCBBCEEE
T ss_pred ecCccHHHHHHHHHHHHHHHcCCC--CEEEEEeecccchHHHHHHHHhhhhcccccCCcccccCcccCCCCCcccccceE
Confidence 999999999999999999999977 9999999997510 01112356899999
Q ss_pred eeeecCCCC-----ccccccccccccc-CcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCC
Q 012353 166 VMLVGPDAP-----VAFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLS 239 (465)
Q Consensus 166 A~Ll~~~~~-----~~~~~~~~~~~~~-~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (465)
|+||.+.+. ..+...+.|+... +...+..| ++.- -.+++++++ + +++ +
T Consensus 256 avvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P---------~~~~----~~~ai~~Al----~--------gl~-~ 309 (428)
T 3mqd_A 256 VLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAP---------SGEG----AIRCMKMAL----S--------TVT-S 309 (428)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSC---------CSHH----HHHHHHHHH----T--------TCC-S
T ss_pred EEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCC---------CHHH----HHHHHHHHH----h--------CCc-c
Confidence 999987421 0111112222221 11122222 2211 122333322 2 478 9
Q ss_pred CCceeeccCCchHHHHHHHH
Q 012353 240 NADYFVFHSPYNKLVQKSFA 259 (465)
Q Consensus 240 did~~~~H~p~~km~~~~~~ 259 (465)
|||++..|..++.+.+.+..
T Consensus 310 dId~ve~HgtgT~~~D~~E~ 329 (428)
T 3mqd_A 310 KIDYINPHATSTPAGDAPEI 329 (428)
T ss_dssp CCCEEECCCCSCHHHHHHHH
T ss_pred ccCEEEEeCCCCCCcCHHHH
Confidence 99999999999988776543
No 70
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=99.51 E-value=5.6e-12 Score=129.90 Aligned_cols=226 Identities=14% Similarity=0.072 Sum_probs=144.0
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc--CCC---h-hhhh---hhhcCeEEecCCCC-------------CCHHHHHHHH
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD--GAS---K-GKYT---IGLGQECMAFCSEV-------------EDVISMSLTA 60 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~---~-~k~~---~Gig~r~~av~~~~-------------Ed~~~la~~A 60 (465)
++|-|.++++.+|-- .+.+++.+.. |.+ + .++. .++..+.-.+.+++ .....|+++|
T Consensus 12 ~~vaI~G~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~d~~~~l~l~a 90 (416)
T 2wge_A 12 PSVVVTAVTATTSIS-PDIESTWKGLLAGESGIHALEDEFVTKWDLAVKIGGHLKDPVDSHMGRLDMRRMSYVQRMGKLL 90 (416)
T ss_dssp CCEEEEEEEEEESSC-SSHHHHHHHHHTTCCCCEECCCHHHHHHTCSCCEEBCCSSCGGGGCCHHHHHHSCHHHHHHHHH
T ss_pred CcEEEEeeEEECCCC-CCHHHHHHHHHcCCCEEEeCCccccccccCCccEEEEeCCchhhhCCHHHHHhcCHHHHHHHHH
Confidence 469999999999998 5777765543 322 1 0111 12222222222111 1135799999
Q ss_pred HHHHHHHCCCCcCCccE----EEEEeecCCCC-----------------cc---------cHHHHHHHHhcccCCCCcee
Q 012353 61 VTNLLEKYKIDPKQIGR----LEVGSETVIDK-----------------SK---------SIKTFLMQIFEKFGNTDIEG 110 (465)
Q Consensus 61 a~~aL~~agi~~~~Id~----li~~T~s~~~~-----------------~p---------s~a~~l~~~LGl~g~~~~~~ 110 (465)
++++|+++|+ +++|. |+++|.++... .| .++.+|+..||+ +.++
T Consensus 91 a~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl----~gp~ 164 (416)
T 2wge_A 91 GGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGA----RAGV 164 (416)
T ss_dssp HHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC----CSCE
T ss_pred HHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhcc----CCCc
Confidence 9999999998 34442 78888765431 22 468899999997 2468
Q ss_pred EeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-c-----------cC---------------CCCCcccccc
Q 012353 111 VDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-Y-----------AE---------------GPARPTGGAA 163 (465)
Q Consensus 111 ~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-y-----------~~---------------~~~~~t~GdG 163 (465)
+++..+|++++.||..|..+|++|.+ +.|||+++|... . .. ..+...+|||
T Consensus 165 ~~v~~aCsS~l~Al~~A~~~I~~G~~--d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~pfd~~~dg~v~geG 242 (416)
T 2wge_A 165 MTPVSACSSGSEAIAHAWRQIVMGDA--DVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDGFVFGEA 242 (416)
T ss_dssp ECCCCGGGHHHHHHHHHHHHHHTTSC--SEEEEEECCCCCCHHHHHHHHTTTCBCCCTTSGGGSCCTTBTTCCCBCBBCE
T ss_pred ccccCchHHHHHHHHHHHHHHHcCCC--CEEEEeeecCccchHHHHHHHhcchhhccccCCcccccccccCCCCccccCc
Confidence 99999999999999999999999977 999999999741 1 00 1123568999
Q ss_pred eeeeeecCCCC-----cccccccccccc-cCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 012353 164 AVVMLVGPDAP-----VAFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFS 237 (465)
Q Consensus 164 A~A~Ll~~~~~-----~~~~~~~~~~~~-~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 237 (465)
|+|+||.+.+. ..+...+.++.. .+...+..| ..++. ....+++..+++. |++
T Consensus 243 aaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p-------~~~~~--------~~~~ai~~al~~a------gl~ 301 (416)
T 2wge_A 243 GALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAP-------AADGV--------RAGRAMTRSLELA------GLS 301 (416)
T ss_dssp EEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSC-------CTTCH--------HHHHHHHHHHHHH------TCC
T ss_pred eEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCC-------CCChH--------HHHHHHHHHHHHc------CCC
Confidence 99999986421 000001222211 111112222 12232 2333445555554 799
Q ss_pred CCCCceeeccCCchHHHHHHH
Q 012353 238 LSNADYFVFHSPYNKLVQKSF 258 (465)
Q Consensus 238 ~~did~~~~H~p~~km~~~~~ 258 (465)
++|||++.+|..++.+.+.+.
T Consensus 302 ~~dId~ve~HgtgT~~gD~~E 322 (416)
T 2wge_A 302 PADIDHVNAHGTATPIGDAAE 322 (416)
T ss_dssp GGGCCEEECCCCCCHHHHHHH
T ss_pred HHHCCEEEECCCCCcCCCHHH
Confidence 999999999999998776553
No 71
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...
Probab=99.49 E-value=3.5e-12 Score=131.04 Aligned_cols=222 Identities=14% Similarity=0.129 Sum_probs=142.1
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc--CCCh----hhh-hhhhcCeEEe---cCCC---------C-CCHHHHHHHHHH
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD--GASK----GKY-TIGLGQECMA---FCSE---------V-EDVISMSLTAVT 62 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~----~k~-~~Gig~r~~a---v~~~---------~-Ed~~~la~~Aa~ 62 (465)
++|-|.++++.+|-- .+.+++.+.. |.+. .++ ..++..+... |... . .....|+++|++
T Consensus 2 ~~v~ItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~fd~~~~~~~~~~~~~d~~~~l~l~aa~ 80 (406)
T 2vba_A 2 KRAVITGLGIVSSIG-NNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKLDTTGLIDRKVVRFMSDASIYAFLSME 80 (406)
T ss_dssp CCEEEEEEEEEBTTB-SSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEECCCCCCTTSSCHHHHTTCCHHHHHHHHHHH
T ss_pred CCEEEEeeEEECCCC-CCHHHHHHHHHcCCCeEEeCCcccccCCccceEEEecCChhhcCCHHHHHhcCHHHHHHHHHHH
Confidence 579999999999988 5777765542 3321 111 1121111111 1110 1 125789999999
Q ss_pred HHHHHCCCCcCCccE-----EEEEeecCCC-------------C--------------cccHHHHHHHHhcccCCCCcee
Q 012353 63 NLLEKYKIDPKQIGR-----LEVGSETVID-------------K--------------SKSIKTFLMQIFEKFGNTDIEG 110 (465)
Q Consensus 63 ~aL~~agi~~~~Id~-----li~~T~s~~~-------------~--------------~ps~a~~l~~~LGl~g~~~~~~ 110 (465)
++|+++|+++++||. |+++|.++.. . ...++.+|+..||+ . .++
T Consensus 81 ~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl---~-Gp~ 156 (406)
T 2vba_A 81 QAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKI---H-GVN 156 (406)
T ss_dssp HHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTC---C-SCE
T ss_pred HHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhccC---C-Cce
Confidence 999999999988886 8888876542 1 12467889999997 2 368
Q ss_pred EeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-c-----------c-------CC--------CCCcccccc
Q 012353 111 VDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-Y-----------A-------EG--------PARPTGGAA 163 (465)
Q Consensus 111 ~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-y-----------~-------~~--------~~~~t~GdG 163 (465)
+.+..+|++++.||..|..+|++|.+ +.+||+++|... . . ++ .+...+|||
T Consensus 157 ~~v~taCsS~l~Al~~A~~~I~~G~~--d~alvgG~e~~~~~~~~~~~~~~~ls~~~~~~p~~~~~pfd~~~~G~v~gEG 234 (406)
T 2vba_A 157 YSISSACATSAHCIGNAVEQIQLGKQ--DIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGG 234 (406)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTCCSBCBBCE
T ss_pred eeeccchhHHHHHHHHHHHHHHcCCC--CEEEEeeeccccChHHHHHhhccccccccCCCCccccCcCcCCCCceEeece
Confidence 99999999999999999999999987 999999999752 1 0 01 123568999
Q ss_pred eeeeeecCCCC-----ccccccccccccc-CcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 012353 164 AVVMLVGPDAP-----VAFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFS 237 (465)
Q Consensus 164 A~A~Ll~~~~~-----~~~~~~~~~~~~~-~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 237 (465)
|+|+||.+.+. ..+...+.|+... +...+..| ++. ....+++..+++ ++
T Consensus 235 aaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p---------~~~--------~~~~ai~~al~~------ag-- 289 (406)
T 2vba_A 235 GGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAP---------SGE--------GAVRCMKMAMHG------VD-- 289 (406)
T ss_dssp EEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSC---------CSH--------HHHHHHHHHHTT------CC--
T ss_pred EEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCC---------CHH--------HHHHHHHHHHhh------CC--
Confidence 99999986421 0010112222221 11112222 121 222333333333 25
Q ss_pred CCCCceeeccCCchHHHHHH
Q 012353 238 LSNADYFVFHSPYNKLVQKS 257 (465)
Q Consensus 238 ~~did~~~~H~p~~km~~~~ 257 (465)
+|||++..|..++.+.+.+
T Consensus 290 -~dId~ve~HgtgT~~gD~~ 308 (406)
T 2vba_A 290 -TPIDYLNSHGTSTPVGDVK 308 (406)
T ss_dssp -SCCCEEECCCCSCHHHHHH
T ss_pred -CCccEEEeeCccCcccCHH
Confidence 8999999999999876654
No 72
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=99.42 E-value=4.6e-11 Score=134.21 Aligned_cols=230 Identities=15% Similarity=0.117 Sum_probs=145.7
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc--CC------Chhh-hhhhhcCeEEecCC-------------CC-----CCHHH
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD--GA------SKGK-YTIGLGQECMAFCS-------------EV-----EDVIS 55 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~------~~~k-~~~Gig~r~~av~~-------------~~-----Ed~~~ 55 (465)
..|-|.||++-+|...-+.+++.+.. |. +..+ +......+.-.+.+ +. .....
T Consensus 39 ~~iaIvG~~~~~Pgg~~~~~~~w~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~l~~~~~fD~~~f~i~~~ea~~mdp~~r 118 (917)
T 2hg4_A 39 EPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWEPDPDARLGGMLAAAGDFDAGFFGISPREALAMDPQQR 118 (917)
T ss_dssp CCEEEEEEEEEBTTTBCSHHHHHHHHHTTCCCCEECCGGGCCCCCSSCCEEBCCTTTTEECTGGGTCCHHHHHHSCHHHH
T ss_pred CCEEEEeceEECCCCCCCHHHHHHHHHcCCCccccCCcccccCCCCCcceeeEecCccccChhhcCCCHHHHHhcCHHHH
Confidence 46999999999997665666654432 22 1121 10000011111111 00 12468
Q ss_pred HHHHHHHHHHHHCCCCcCCccE----EEEEeecCCCCc-------------------ccHHHHHHHHhcccCCCCceeEe
Q 012353 56 MSLTAVTNLLEKYKIDPKQIGR----LEVGSETVIDKS-------------------KSIKTFLMQIFEKFGNTDIEGVD 112 (465)
Q Consensus 56 la~~Aa~~aL~~agi~~~~Id~----li~~T~s~~~~~-------------------ps~a~~l~~~LGl~g~~~~~~~d 112 (465)
|+++|+.++|+++|+++++|+. |++|+.+.++.. ..++..|...||+. .+++.
T Consensus 119 l~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~----Gps~t 194 (917)
T 2hg4_A 119 IMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLE----GPAMT 194 (917)
T ss_dssp HHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTCC----SCEEE
T ss_pred HHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCCC----CCeEe
Confidence 9999999999999999999985 788887765431 13677899999982 26788
Q ss_pred ecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-------cc-------CC--------CCCcccccceeeeeec
Q 012353 113 STNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------YA-------EG--------PARPTGGAAAVVMLVG 170 (465)
Q Consensus 113 i~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y~-------~~--------~~~~t~GdGA~A~Ll~ 170 (465)
+..+|++++.||..|...|++|.+ +.|||+++|... +. ++ .+...+||||+|+||.
T Consensus 195 v~taCsSsl~Al~~A~~~I~~G~~--d~aLvgGv~~~~~p~~~~~~~~~~~ls~~g~~~pFd~~adG~~~gEGagavVL~ 272 (917)
T 2hg4_A 195 VDTACSSGLTALHLAMESLRRDEC--GLALAGGVTVMSSPGAFTEFRSQGGLAADGRCKPFSKAADGFGLAEGAGVLVLQ 272 (917)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCSTHHHHHHTTSSCBCTTSCCCTTBTTCCCBCBBCEEEEEEEE
T ss_pred ecCCcHHHHHHHHHHHHHHHcCCC--CEEEEeEeccccChhhhHhhhhccCcCCccccCcccccccCCCCcceEEEEEEe
Confidence 999999999999999999999977 999999999752 11 01 1124589999999997
Q ss_pred CCCC-----cccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceee
Q 012353 171 PDAP-----VAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFV 245 (465)
Q Consensus 171 ~~~~-----~~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~ 245 (465)
+.+. ..+...+.|+...+ |-... +...| ++ +....+++..+++. |++++|||++.
T Consensus 273 ~l~~A~~~g~~i~a~I~G~~~~~--dg~~~--~~~~P--~~--------~~q~~ai~~Al~~A------gl~p~dId~ve 332 (917)
T 2hg4_A 273 RLSAARREGRPVLAVLRGSAVNQ--DGASN--GLTAP--SG--------PAQQRVIRRALENA------GVRAGDVDYVE 332 (917)
T ss_dssp EHHHHHHTTCCCCEEEEEEEEEE--CCSCS--SSSCC--CH--------HHHHHHHHHHHHHH------TCCGGGCCEEE
T ss_pred eHHHHHhCCCCeEEEEEEEEEec--CCCcc--CCCCC--CH--------HHHHHHHHHHHHHc------CCCHHHCCEEe
Confidence 6421 00111123332211 11111 11112 11 22333444444554 79999999999
Q ss_pred ccCCchHHHHHHH
Q 012353 246 FHSPYNKLVQKSF 258 (465)
Q Consensus 246 ~H~p~~km~~~~~ 258 (465)
.|..++.+.+.+.
T Consensus 333 aHgtgT~~gD~~E 345 (917)
T 2hg4_A 333 AHGTGTRLGDPIE 345 (917)
T ss_dssp CCCCCCTTHHHHH
T ss_pred eccCCCccCcHHH
Confidence 9999998776543
No 73
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=99.40 E-value=1.3e-11 Score=138.50 Aligned_cols=180 Identities=14% Similarity=0.069 Sum_probs=124.5
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCccE----EEEEeecCCCCc-----------------c-cHHHHHHHHhcccCCCCcee
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQIGR----LEVGSETVIDKS-----------------K-SIKTFLMQIFEKFGNTDIEG 110 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~Id~----li~~T~s~~~~~-----------------p-s~a~~l~~~LGl~g~~~~~~ 110 (465)
...|+++|+.++|+++|+++++||. |++++.++++.. + .++.+|+..||+. .++
T Consensus 95 ~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~----Gps 170 (915)
T 2qo3_A 95 QQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGLE----GPS 170 (915)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTBC----SCE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCCC----CCE
Confidence 4689999999999999999999994 888888766531 1 4678999999982 268
Q ss_pred EeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccccc----------------------cCCCCCcccccceeeee
Q 012353 111 VDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY----------------------AEGPARPTGGAAAVVML 168 (465)
Q Consensus 111 ~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~y----------------------~~~~~~~t~GdGA~A~L 168 (465)
+.+..+|++++.||..|..+|++|.+ +.|||+++|...- +...+...+||||+|+|
T Consensus 171 ~tv~taCsSsl~Al~~A~~~I~~G~~--d~aLvgGve~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~v~gEGagavV 248 (915)
T 2qo3_A 171 ISVDTACSSSLVALHLAVESLRKGES--SMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGADGFGFSEGVTLVL 248 (915)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHTTSC--SSEEEEEEECCSSTHHHHHHHTTTCBCSSCCCCTTBTTCCCBCBBCEEEEEE
T ss_pred EEECCCCHHHHHHHHHHHHHHHcCCC--CEEEEeEehhhcCHHHHHHHhhhcccCCCCCcccccCCCCceeecCceEEEE
Confidence 88999999999999999999999977 9999999997521 01112356899999999
Q ss_pred ecCCCCc-----ccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCce
Q 012353 169 VGPDAPV-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADY 243 (465)
Q Consensus 169 l~~~~~~-----~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~ 243 (465)
|.+.+.. .+...+.|+...+ |-... +...| ++ .....+++..+++. |++++|||+
T Consensus 249 L~~~~~A~~~g~~i~a~I~G~~~~~--dg~~~--~~~~p--~~--------~~~~~~i~~Al~~A------gl~p~dId~ 308 (915)
T 2qo3_A 249 LERLSEARRNGHEVLAVVRGSALNQ--DGASN--GLSAP--SG--------PAQRRVIRQALESC------GLEPGDVDA 308 (915)
T ss_dssp EEEHHHHHHTTCCCCEEEEEEEEEE--CCSCS--STTCC--CH--------HHHHHHHHHHHHHT------TCCGGGCCE
T ss_pred EeEhHHhhhCCCCeEEEEEEEEEec--CCCcc--CCCCC--CH--------HHHHHHHHHHHHHc------CCCHHHCcE
Confidence 9864210 0101122332211 11111 00112 22 22333444455554 899999999
Q ss_pred eeccCCchHHHHHHH
Q 012353 244 FVFHSPYNKLVQKSF 258 (465)
Q Consensus 244 ~~~H~p~~km~~~~~ 258 (465)
+..|..++.+.+.+.
T Consensus 309 ve~HgtgT~~gD~~E 323 (915)
T 2qo3_A 309 VEAHGTGTALGDPIE 323 (915)
T ss_dssp EECCCCCCTTTHHHH
T ss_pred EEecCCCCccCCHHH
Confidence 999999888766553
No 74
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=99.36 E-value=4e-11 Score=135.22 Aligned_cols=229 Identities=15% Similarity=0.181 Sum_probs=146.9
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc--CCC-----hhhhhh---hhcCeEEe------cCCC----------CCC-HHH
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD--GAS-----KGKYTI---GLGQECMA------FCSE----------VED-VIS 55 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~-----~~k~~~---Gig~r~~a------v~~~----------~Ed-~~~ 55 (465)
.+|-|.||++.+|.- .+.+++.+.. |.+ +.++.. +...+.-. |... .-| ...
T Consensus 4 ~~IaIvGmg~r~P~~-~~~~~~W~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~i~~~ea~~mDp~~r 82 (965)
T 3hhd_A 4 EEVVIAGMSGKLPES-ENLQEFWDNLIGGVDMVTDDDRRWKAGLYGLPRRSGKLKDLSRFDASFFGVHPKQAHTMDPQLR 82 (965)
T ss_dssp CCEEEEEEEEEBTTB-SSHHHHHHHHHTTCCCEECSSSSSCTTGGGCCSCEECCSCSSCCCTTTTTCCHHHHHTSCHHHH
T ss_pred CCEEEEeeeEECCCC-CCHHHHHHHHHcCCCcccCCCcccccccccCcccccccCChhhcChhhcCCCHHHHhhcCHHHH
Confidence 578999999999986 5777765543 321 111111 10011000 1000 012 356
Q ss_pred HHHHHHHHHHHHCCCCcCCcc----EEEEEeecCCC-------------------CcccHHHHHHHHhcccCCCCceeEe
Q 012353 56 MSLTAVTNLLEKYKIDPKQIG----RLEVGSETVID-------------------KSKSIKTFLMQIFEKFGNTDIEGVD 112 (465)
Q Consensus 56 la~~Aa~~aL~~agi~~~~Id----~li~~T~s~~~-------------------~~ps~a~~l~~~LGl~g~~~~~~~d 112 (465)
|+++|+.++|+++|+++++|+ .+++++.+.++ ..+.++..|...||+. -+++.
T Consensus 83 L~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~----GPs~t 158 (965)
T 3hhd_A 83 LLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFR----GPSIA 158 (965)
T ss_dssp HHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCC----SCEEE
T ss_pred HHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCCC----CCeee
Confidence 999999999999999999999 78888776543 1235788999999982 26888
Q ss_pred ecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-------c-------cCC--------CCCcccccceeeeeec
Q 012353 113 STNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------Y-------AEG--------PARPTGGAAAVVMLVG 170 (465)
Q Consensus 113 i~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y-------~~~--------~~~~t~GdGA~A~Ll~ 170 (465)
+..||++++.||..|...|++|.+ +.|||.++|... + .++ .+...+||||+|+||.
T Consensus 159 vdtACSSsl~Al~~A~~~I~~G~~--d~aLagGv~~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~~~gEGagavvL~ 236 (965)
T 3hhd_A 159 LDTACSSSLMALQNAYQAIHSGQC--PAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYCRSEGVVAVLLT 236 (965)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCCHHHHHHHHHHTCBCTTCCCCTTBTTCCSBCBBCEEEEEEEE
T ss_pred ecCchHHHHHHHHHHHHHHHcCCC--CEEEEeeeccccCHHHHHHHHhccCcCCCCccccchhccCCccccceEEEEEEe
Confidence 999999999999999999999987 999999999752 0 011 1235689999999998
Q ss_pred CCCCc-ccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccCC
Q 012353 171 PDAPV-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSP 249 (465)
Q Consensus 171 ~~~~~-~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~p 249 (465)
+.... .+...+.|+...+ |-.... +...|. + .....+++..+++. |++++|||++-.|-.
T Consensus 237 ~l~~A~~i~a~I~g~~~n~--dg~~~~-~~t~P~--~--------~~q~~~i~~Al~~A------gl~p~dIdyvEaHgT 297 (965)
T 3hhd_A 237 KKSLARRVYATILNAGTNT--DGFKEQ-GVTFPS--G--------DIQEQLIRSLYQSA------GVAPESFEYIEAHGT 297 (965)
T ss_dssp EGGGCSSCSEEEEEEEEEE--CCCCTT-CTTSCC--H--------HHHHHHHHHHHHHT------TCCGGGEEEEECCCC
T ss_pred cHHHcCcccEEEEeeeccC--CCCCCC-CCcCCC--H--------HHHHHHHHHHHHHh------CCCHHHhccccccCC
Confidence 75321 1111133333211 111111 111121 1 12223444444444 899999999999998
Q ss_pred chHHHHHH
Q 012353 250 YNKLVQKS 257 (465)
Q Consensus 250 ~~km~~~~ 257 (465)
++.+.+.+
T Consensus 298 gT~~gD~~ 305 (965)
T 3hhd_A 298 GTKVGDPQ 305 (965)
T ss_dssp CCTTHHHH
T ss_pred CCCCCCHH
Confidence 88776654
No 75
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=98.97 E-value=1.6e-08 Score=106.75 Aligned_cols=108 Identities=9% Similarity=0.017 Sum_probs=81.7
Q ss_pred hhhcCeEEecC---CCCCCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecC------------CCCcccHHHHHHHHhc
Q 012353 37 IGLGQECMAFC---SEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETV------------IDKSKSIKTFLMQIFE 101 (465)
Q Consensus 37 ~Gig~r~~av~---~~~Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~------------~~~~ps~a~~l~~~LG 101 (465)
+|+|+...... ....++.+|+++|++.+|+++|+++++||.+|.+.... .......+..+...||
T Consensus 23 VGvG~t~~r~~~g~~~~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~~va~~lG 102 (520)
T 4egv_A 23 VGVGQFTERIDLDGYRGMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPRSVARNIG 102 (520)
T ss_dssp EEEEEEEC--------CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHHHHHHHHT
T ss_pred EEeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHHHHHHHcC
Confidence 57775432111 13568999999999999999999999988776443211 1123456778999999
Q ss_pred ccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc
Q 012353 102 KFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 102 l~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~ 149 (465)
+ +...++.+.++|+++..++..|+..|++|.+ +.||+++.|.+
T Consensus 103 l---~~~~~~~~~~~caSg~~av~~AA~aI~aG~a--dvvlAgG~EsM 145 (520)
T 4egv_A 103 A---DPAHAVLEVIGGQSPQHLATEFGGKIAAGEN--DVVLIFGSENT 145 (520)
T ss_dssp C---CCSEEEECCSSTTHHHHHHHHHHHHHHTTSC--SEEEEEEEECC
T ss_pred C---CCceEEEecCCCHHHHHHHHHHHHHHHcCCC--CEEEEEEEEec
Confidence 7 4467788889999999999999999999977 99999999875
No 76
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=98.93 E-value=1.4e-08 Score=124.73 Aligned_cols=186 Identities=9% Similarity=0.000 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCcc--------EEEEEeecCCC------------------------CcccHHHHHHH-H
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQIG--------RLEVGSETVID------------------------KSKSIKTFLMQ-I 99 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~Id--------~li~~T~s~~~------------------------~~ps~a~~l~~-~ 99 (465)
...|++.|+.++|+++|+++++|+ .+++|+..+.. .....++.+.. .
T Consensus 2647 ~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~~ 2726 (3089)
T 3zen_D 2647 VALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQSY 2726 (3089)
T ss_dssp HHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHHH
Confidence 578999999999999999999885 57777754210 01234556654 4
Q ss_pred hcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc------c------c------------CCC
Q 012353 100 FEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV------Y------A------------EGP 155 (465)
Q Consensus 100 LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~------y------~------------~~~ 155 (465)
||+ ..+++.+..+|++++.||..|..+|++|.+ +.+||.++|... + . ++.
T Consensus 2727 lGl----~GPs~tV~tACSSsl~Al~~A~~~IrsG~~--d~aLaGGve~ls~~~~~~f~~~~als~~~~~~~~~~sp~~~ 2800 (3089)
T 3zen_D 2727 VGG----YGAMVHPVGACATAAVSVEEGVDKIKLGKA--DLVIAGGFDDLTLEAIIGFGDMAATADTEMMRAKGISDSKF 2800 (3089)
T ss_dssp TCC----CSCEECCBCTTCHHHHHHHHHHHHHHTTSC--SEEEEEEEECCCHHHHHHHHHHTCBCCHHHHHHTTCCTTTS
T ss_pred cCC----CCCceeeccchhhHHHHHHHHHHHHHCCCC--CeeEEeeecccCHHHHHHHHHhhhhhcchhhhhccCCcccc
Confidence 586 247899999999999999999999999987 999999999741 0 0 111
Q ss_pred --------CCcccccceeeeeecCCCC-----cccccccccccc-cCcccccccCCCCC-Cc-ccCCchhHHHHHHHHHH
Q 012353 156 --------ARPTGGAAAVVMLVGPDAP-----VAFESKLRGSHM-SHAYDFYKPNLASE-YP-VVDGKLSQTCYLMALDT 219 (465)
Q Consensus 156 --------~~~t~GdGA~A~Ll~~~~~-----~~~~~~~~~~~~-~~~~df~~p~~~~~-~p-~~dg~~s~~~y~~~~~~ 219 (465)
+..+.||||+|+||.+... ..+..-+.++.. .+-...-.|.++.. +. ..+++. .
T Consensus 2801 crpFd~~~dG~v~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~aP~~g~~~a~~~~q~----------~ 2870 (3089)
T 3zen_D 2801 SRANDRRRLGFLEAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIPAPGLGALGAARGGRE----------S 2870 (3089)
T ss_dssp CCSSBTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSSCCCCGGGGGSTTGGG----------S
T ss_pred cCccccCCCCEEEeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCccCCchhHHhHhhhhHH----------H
Confidence 1234699999999987421 000000122221 11111111111100 00 011221 2
Q ss_pred HHHHHHHHhhhhhcCCCCCCCCceeeccCCchHHHHHHHHH
Q 012353 220 CYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFAR 260 (465)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~did~~~~H~p~~km~~~~~~~ 260 (465)
+++..+++. |++++|||++..|..++++.+.+...
T Consensus 2871 ai~~AL~~A------Gl~p~DIdyVEaHGTGT~lgD~~E~~ 2905 (3089)
T 3zen_D 2871 TLARSLAQL------GVGADDIAVISKHDTSTLANDPNETE 2905 (3089)
T ss_dssp HHHHHHHTT------TCCGGGEEEEECCCCCCTTHHHHHHH
T ss_pred HHHHHHHHc------CCCHHHeeEEEEecCCcccccHHHHH
Confidence 334444443 89999999999999999877765443
No 77
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=98.44 E-value=7.9e-07 Score=101.78 Aligned_cols=90 Identities=14% Similarity=0.032 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHCCCC-cCCc----c----EEEEEeecCCCC-----------------------cc-cHHHHHHH-H
Q 012353 54 ISMSLTAVTNLLEKYKID-PKQI----G----RLEVGSETVIDK-----------------------SK-SIKTFLMQ-I 99 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~-~~~I----d----~li~~T~s~~~~-----------------------~p-s~a~~l~~-~ 99 (465)
..|++.|+.+||+++|++ |.++ + .+++||..+... .+ ..+++|.. .
T Consensus 1013 qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~~ 1092 (1688)
T 2pff_A 1013 TLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLL 1092 (1688)
T ss_dssp TTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHHH
Confidence 468999999999999997 6542 2 345555443310 12 34556666 5
Q ss_pred hcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc
Q 012353 100 FEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 100 LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~ 149 (465)
||+ ..+++.+..||++++.||..|...|++|.+ +.+||.++|..
T Consensus 1093 LGl----~GPs~TVdtACASSL~AL~lA~~aIrsGea--DvaLVGGvE~m 1136 (1688)
T 2pff_A 1093 ISS----SGPIKTPVGACATSVESVDIGVETILSGKA--RICIVGGYDDF 1136 (1688)
T ss_dssp CCC----CCCCCCCCCTTTTTHHHHHHHHHHHHTTTC--SCBCCCCCCCC
T ss_pred cCC----cCCeEEecCCCchHHHHHHHHHHHHHCCCC--CEEEEeeeccC
Confidence 776 236788899999999999999999999987 99999999974
No 78
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.36 E-value=5.8e-06 Score=101.65 Aligned_cols=230 Identities=16% Similarity=0.170 Sum_probs=141.6
Q ss_pred ceeEEeEEEEecCCceechHHHHHhc--CCC-----hhhhhh---hhcCeEEecCCC-----------------CCC-HH
Q 012353 3 KNVGILAMDIYFPPTCVQQEALEAHD--GAS-----KGKYTI---GLGQECMAFCSE-----------------VED-VI 54 (465)
Q Consensus 3 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~-----~~k~~~---Gig~r~~av~~~-----------------~Ed-~~ 54 (465)
..|-|.||++-+|.- -+.+++.+.. |.+ +.++.. +.. ++..+..+ .-| ..
T Consensus 2 ~~iaI~G~~~~~p~~-~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~fd~~~f~i~~~ea~~~dpq~ 79 (2512)
T 2vz8_A 2 EEVVIAGMSGKLPES-ENLEEFWANLIGGVDMVTADDRRWKAGLYGLP-RRMGKLKDLSRFDASFFGVHSKQANTMDPQL 79 (2512)
T ss_dssp CCEEEEEEEEEBTTB-SSHHHHHHHHHTTCCCEEECSSSSCTTGGGCC-SEEECCSCSSCCCTTTTTCCHHHHHTSCHHH
T ss_pred CCEEEEeeeeeCCCC-CCHHHHHHHHHcCCccccCCCcccccccccCc-ccceecCCcccCCHhhcCCCHHHHHhcCHHH
Confidence 468999999999984 5777765542 221 111111 111 11111110 012 35
Q ss_pred HHHHHHHHHHHHHCCCCcCCcc----EEEEEeecCCCC------------------cc-cHHHHHHHHhcccCCCCceeE
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIG----RLEVGSETVIDK------------------SK-SIKTFLMQIFEKFGNTDIEGV 111 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id----~li~~T~s~~~~------------------~p-s~a~~l~~~LGl~g~~~~~~~ 111 (465)
-|+++++.++|+++|+++++++ .|++|+.+.++. .+ ..+.+|...||+. -+++
T Consensus 80 rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l~----Gps~ 155 (2512)
T 2vz8_A 80 RMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFK----GPSI 155 (2512)
T ss_dssp HHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTCC----SCEE
T ss_pred HHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCCC----CCce
Confidence 6899999999999999876553 466676543220 11 2677899999983 3567
Q ss_pred eecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEecccc-------c------c-CCC--------CCcccccceeeeee
Q 012353 112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------Y------A-EGP--------ARPTGGAAAVVMLV 169 (465)
Q Consensus 112 di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~~-------y------~-~~~--------~~~t~GdGA~A~Ll 169 (465)
.+..||++++.||..|+..|++|.+ +.+||.+++... + . ++. +....|+|++++||
T Consensus 156 tv~tACsSsl~Al~~A~~~l~~g~~--d~al~gG~~~~~~p~~~~~~~~~~~ls~~g~c~~Fd~~adG~~~gEG~~~~vL 233 (2512)
T 2vz8_A 156 TIDTACSSSLLALQSAYQAIRGGEC--SAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEGTGYCRAEAVVAVLL 233 (2512)
T ss_dssp EEECTTSTHHHHHHHHHHHHHTSSC--SEEEEEEEECCCCHHHHHHHHHTTCBCTTCSCCSSSTTCCCBCBBCEEEEEEE
T ss_pred eeccHhHHHHHHHHHHHHHHHcCCC--CeeEEeEeccccCHHHHHHHccCCCCCCCCCCCCCCCCCCCcceeeeEEEEEE
Confidence 7889999999999999999999987 999999999741 1 0 111 12457999999999
Q ss_pred cCCCC-cccccccccccccCcccccccCCCCCCcccCCchhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCceeeccC
Q 012353 170 GPDAP-VAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHS 248 (465)
Q Consensus 170 ~~~~~-~~~~~~~~~~~~~~~~df~~p~~~~~~p~~dg~~s~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~did~~~~H~ 248 (465)
.+-.. ..+..-+.|+... .|-++.. +...| +|. ....+++..++ .+|++++||+|+-.|.
T Consensus 234 k~l~~A~~i~a~i~g~~~n--~dg~~~~-~~t~P--~~~--------~q~~~i~~al~------~ag~~p~~i~yveaHG 294 (2512)
T 2vz8_A 234 TKKSLARRVYATILNAGTN--TDGSKEQ-GVTFP--SGD--------VQEQLIRSLYA------PAGPDPESLEYIEAHG 294 (2512)
T ss_dssp EEGGGCSCCSEEEEEEEEE--ECCCCTT-CSSSC--CHH--------HHHHHHHTTSG------GGSSCTTSCCEEECCC
T ss_pred EEHHHCCcccEEEEEEEEc--CCCCCCC-CCCCC--CHH--------HHHHHHHHHHH------HcCCCHHHCCEEEeec
Confidence 87532 1121123343322 1212211 11123 221 12223333323 3489999999999999
Q ss_pred CchHHHHHHHH
Q 012353 249 PYNKLVQKSFA 259 (465)
Q Consensus 249 p~~km~~~~~~ 259 (465)
.++++.+.+-.
T Consensus 295 TgT~~gD~~E~ 305 (2512)
T 2vz8_A 295 TGTKVGDPQEL 305 (2512)
T ss_dssp CCCTTHHHHHH
T ss_pred CCCCCCCHHHH
Confidence 99988876543
No 79
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=98.15 E-value=7.3e-05 Score=88.13 Aligned_cols=91 Identities=18% Similarity=0.085 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHHCCCC-cCCc----c----EEEEEeecCC-------------------CC-----cccHHHHHHHH
Q 012353 53 VISMSLTAVTNLLEKYKID-PKQI----G----RLEVGSETVI-------------------DK-----SKSIKTFLMQI 99 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~-~~~I----d----~li~~T~s~~-------------------~~-----~ps~a~~l~~~ 99 (465)
..-|++.++..+|+++|++ |.++ + .+++|+..+. +. .-.++++|...
T Consensus 1186 ~~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~ 1265 (1878)
T 2uv9_A 1186 VTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNML 1265 (1878)
T ss_dssp HHHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHH
Confidence 3568999999999999998 6652 2 4556655432 00 11356677774
Q ss_pred -hcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc
Q 012353 100 -FEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 100 -LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~ 149 (465)
||+. -+++.+..||++++.||..|+..|++|.+ +.+||.+.|..
T Consensus 1266 ~lg~~----GP~~tv~tACASsl~Al~~A~~~I~sG~a--dvalvGGvd~~ 1310 (1878)
T 2uv9_A 1266 LLSST----GPIKTPVGACATAVESLDVGYDTIMQGKA--RVCLVGGFDDF 1310 (1878)
T ss_dssp TCCCC----CCBCCBCCGGGHHHHHHHHHHHHHTTTSC--SEEEEEEEECC
T ss_pred hcCCC----CCeEEEcCcchHHHHHHHHHHHHHHcCCC--CEEEEeeeccC
Confidence 8863 25677889999999999999999999988 99999999975
No 80
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=97.93 E-value=7.2e-05 Score=88.29 Aligned_cols=91 Identities=16% Similarity=0.080 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHHCCC-CcCC----cc----EEEEEeecCC---------C---------------CcccHHHHHHHH
Q 012353 53 VISMSLTAVTNLLEKYKI-DPKQ----IG----RLEVGSETVI---------D---------------KSKSIKTFLMQI 99 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi-~~~~----Id----~li~~T~s~~---------~---------------~~ps~a~~l~~~ 99 (465)
..-|++.++..+|+++|+ +|.+ |+ .+++|+..+. + ..-..+.+|...
T Consensus 1211 ~~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~ 1290 (1887)
T 2uv8_A 1211 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1290 (1887)
T ss_dssp HHHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHH
Confidence 456899999999999999 4766 22 4455655332 0 011356677774
Q ss_pred -hcccCCCCceeEeecCcChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc
Q 012353 100 -FEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 100 -LGl~g~~~~~~~di~~aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~ 149 (465)
||+. -+++.+..||++++.||..|...|++|.+ +.+||.++|..
T Consensus 1291 ~lgl~----GP~~tv~tACASsl~Al~~A~~~I~sG~a--dvaLvGGvd~~ 1335 (1887)
T 2uv8_A 1291 LISSS----GPIKTPVGACATSVESVDIGVETILSGKA--RICIVGGYDDF 1335 (1887)
T ss_dssp TTCCC----SCCCCCCCGGGHHHHHHHHHHHHHHTTSC--SEEEEEEEECC
T ss_pred HcCCc----cceEEeecccccHHHHHHHHHHHHHcCCC--CEEEEeeeccC
Confidence 8863 25677889999999999999999999988 99999999974
No 81
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=90.76 E-value=0.54 Score=46.62 Aligned_cols=96 Identities=18% Similarity=0.096 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEee----cC-cChhHHHHHHHH
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS----TN-ACYGGTAALFNC 127 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di----~~-aC~gg~~AL~~A 127 (465)
.+....++++++|+++|++++|||.+++....... .. .++++||+ ...-...++ +| ++++-..+|..+
T Consensus 236 ~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~~----~~~~~lgl--~~ek~~~~~~~~~GNt~aAsipl~L~~~ 308 (357)
T 3s3l_A 236 YIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-GH----ELHDLLGL--PDERTSWAYGRTTGHVGAGDQYAGLAHL 308 (357)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-SC----CHHHHHTS--CGGGBTHHHHHHHCBCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HH----HHHHHcCC--CHHHhHHHhccccccchHhHHHHHHHHH
Confidence 34556778999999999999999999963333322 22 36788997 332222233 22 333333344433
Q ss_pred HHHHHcCC-CCCCEEEEEEeccccccCCCCCcccccc--eeeeeecCC
Q 012353 128 VNWVESSS-WDGRYGLVVCTDSAVYAEGPARPTGGAA--AVVMLVGPD 172 (465)
Q Consensus 128 ~~~l~sg~-~~~~~aLVVasD~~~y~~~~~~~t~GdG--A~A~Ll~~~ 172 (465)
++.|. .+|+++|+++ ||.| ..|+||.-.
T Consensus 309 ---~~~g~l~~Gd~vll~~--------------fG~G~t~~a~ll~~~ 339 (357)
T 3s3l_A 309 ---VENALVQPGDRVLLFG--------------GGAGYTCTAAVVEIL 339 (357)
T ss_dssp ---HHTTCCCTTCEEEEEC--------------CBTTTEEEEEEEEEC
T ss_pred ---HHcCCCCCCCEEEEEE--------------EchhhhheeeeEEec
Confidence 44443 2678888887 6776 457777654
No 82
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=90.44 E-value=0.62 Score=45.91 Aligned_cols=87 Identities=21% Similarity=0.145 Sum_probs=54.4
Q ss_pred HHHHHHHHH---HHHHHHCCCCcCCccEEEEEeecCCCCcc---cHHHHHHHHhcccCCC-------CceeEeec-C---
Q 012353 53 VISMSLTAV---TNLLEKYKIDPKQIGRLEVGSETVIDKSK---SIKTFLMQIFEKFGNT-------DIEGVDST-N--- 115 (465)
Q Consensus 53 ~~~la~~Aa---~~aL~~agi~~~~Id~li~~T~s~~~~~p---s~a~~l~~~LGl~g~~-------~~~~~di~-~--- 115 (465)
-..|+-.|+ .+.|+++|++|+|+|+|+.+ |... .+...|.+++|+ .. .+..||-. +
T Consensus 202 g~amaPaA~~ti~~~l~d~g~~~~d~D~ivtg-----dL~q~g~~il~~l~~~~g~--~~~~~~~dcg~~iy~~~~~~~~ 274 (347)
T 3lma_A 202 GSAMAPAAADTIKQHLEDLGRTPDDYDLILTG-----DLSGVGSPILKDLLKEEGI--NVGTKHNDCGLMIYTPDQQVFA 274 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEE-----SCHHHHHHHHHHHHHHTTC--CCGGGEEEGGGTSSCC------
T ss_pred cccchHHHHHHHHHHHHHhCCCHHHcCEEecC-----ChHHHHHHHHHHHHHHcCC--ChhHCccccceEEecCCCcccC
Confidence 344444444 88999999999999999963 3222 234456666665 21 22334432 4
Q ss_pred -----cChhHHHHHHHHHHHHHcCCCCCCEEEEEEeccc
Q 012353 116 -----ACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 116 -----aC~gg~~AL~~A~~~l~sg~~~~~~aLVVasD~~ 149 (465)
||++.+..=.+-.. |+.|.+ +++|+|++-..
T Consensus 275 ggsg~~csa~v~~~~~~~~-~~~g~~--~ril~~~tGal 310 (347)
T 3lma_A 275 GGSGCACSAVVTFAHIFKE-IEAGRL--NRVLVVATGAL 310 (347)
T ss_dssp ---CCCCHHHHHHHTHHHH-HHTTSC--SEEEEEEEEEC
T ss_pred CCCccccHHHHHHHHHHHH-HhcCcc--cEEEEEecccc
Confidence 77665544444333 778977 99999998765
No 83
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=90.26 E-value=1.2 Score=44.71 Aligned_cols=93 Identities=14% Similarity=0.175 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCce--e--Eeec--CcChhHHHHHHHHHHH
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE--G--VDST--NACYGGTAALFNCVNW 130 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~--~--~di~--~aC~gg~~AL~~A~~~ 130 (465)
...|++++|+++|++|+|||.+.+. |........+.+.||+. ...+. + ..++ .+|+|....+.....+
T Consensus 296 ~~~ai~~al~~agl~~~dId~ve~~-----d~fa~~~~~~~~~lg~~-~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L 369 (395)
T 4e1l_A 296 PIPATRKALKKAGLSINDIDLIEAN-----EAFAAQALAVKNELQID-SSKLNVNGGAIALGHPIGASGARILVTLIYEM 369 (395)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEEC-----CSBHHHHHHHHHHHTCC-GGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec-----ChhHHHHHHHHHHhCCC-CCCCCcCCchhhcCCcHHHHHHHHHHHHHHHH
Confidence 3578999999999999999999962 22334455678888861 11111 1 1122 2566555555554444
Q ss_pred HHcCCCCCCEEEEEEeccccccCCCCCcccccceeeeeec
Q 012353 131 VESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVG 170 (465)
Q Consensus 131 l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGA~A~Ll~ 170 (465)
-..+ +++.|+... .+|..+.|+||+
T Consensus 370 ~~~~---~~~gl~~~c------------~ggG~g~a~~~e 394 (395)
T 4e1l_A 370 QKRK---VETGLATLC------------IGGGQGISMVVS 394 (395)
T ss_dssp HHHT---CSEEEEEEE------------SSTTEEEEEEEE
T ss_pred HhcC---CCEEEEEEc------------cCCCceEEEEEe
Confidence 3333 377776542 245556777765
No 84
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=88.99 E-value=0.74 Score=46.25 Aligned_cols=95 Identities=16% Similarity=0.263 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCC-CCcee--EeecC--cChhHHHHHHHHHHHH
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGN-TDIEG--VDSTN--ACYGGTAALFNCVNWV 131 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~-~~~~~--~di~~--aC~gg~~AL~~A~~~l 131 (465)
...|++++|+++|++|+|||.+.+. |........+.+.||+... -++.+ .-+++ +|+|....+ .+...|
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ve~~-----d~f~~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~-~~~~~L 370 (396)
T 4dd5_A 297 PVPATKKALEAANMTIEDIDLVEAN-----EAFAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILT-TLLYEM 370 (396)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEC-----CSBHHHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec-----ChHHHHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHH-HHHHHH
Confidence 4678899999999999999999952 2233444567788886210 01111 11222 444444333 334444
Q ss_pred HcCCCCCCEEEEEEeccccccCCCCCcccccceeeeeecC
Q 012353 132 ESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP 171 (465)
Q Consensus 132 ~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGA~A~Ll~~ 171 (465)
+.. .+++.|+... .+|..++|+||++
T Consensus 371 ~~~--~~~~gl~~~c------------~ggG~g~a~~~e~ 396 (396)
T 4dd5_A 371 KRR--DAKTGLATLC------------IGGGMGTTLIVKR 396 (396)
T ss_dssp HHH--TCSEEEEEEE------------ETTTEEEEEEEEC
T ss_pred Hhc--CCCeEEEEEc------------ccCCceeEEEEeC
Confidence 444 2378877542 3455667787753
No 85
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=87.99 E-value=1.1 Score=44.92 Aligned_cols=94 Identities=13% Similarity=0.073 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCc--e--eEeec--CcChhHHHHHHHHHHH
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI--E--GVDST--NACYGGTAALFNCVNW 130 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~--~--~~di~--~aC~gg~~AL~~A~~~ 130 (465)
...|++++|+++|++++|||.+.+. |.....+-.+.+.||+.. ..+ . ..-++ .+++|....+..+ .-
T Consensus 292 ~~~a~~~al~~agl~~~dId~ie~~-----d~f~~~~l~~~~~lg~~~-~~vn~~gg~~~~GHp~gAsG~~~~~~~~-~~ 364 (392)
T 2vu1_A 292 PIPASRKALERAGWKIGDLDLVEAN-----EAFAAQACAVNKDLGWDP-SIVNVNGGAIAIGHPIGASGARILNTLL-FE 364 (392)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEC-----CSBHHHHHHHHHHHCCCG-GGBSTTCCHHHHCCCGGGHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec-----cccHHHHHHHHHHcCCCc-ccCCCCccHhhhCCChhhHHHHHHHHHH-HH
Confidence 3678999999999999999999963 333333444678888621 111 1 11122 2444444444444 44
Q ss_pred HHcCCCCCCEEEEEEeccccccCCCCCcccccceeeeeecC
Q 012353 131 VESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP 171 (465)
Q Consensus 131 l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGA~A~Ll~~ 171 (465)
|+.. +++++|+..+ .+|..+.|+||++
T Consensus 365 L~~~--~~~~gl~~~~------------~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 365 MKRR--GARKGLATLC------------IGGGMGVAMCIES 391 (392)
T ss_dssp HHHH--TCSEEEEEEE------------ETTTEEEEEEEEC
T ss_pred Hhcc--CCCEEEEEEe------------cccchheEEEEEe
Confidence 5544 3478877432 1344556777764
No 86
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=87.52 E-value=1.3 Score=44.78 Aligned_cols=92 Identities=13% Similarity=0.185 Sum_probs=52.7
Q ss_pred HHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCC-c------eeEeecCcChhHHHHHHHHHHH
Q 012353 58 LTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTD-I------EGVDSTNACYGGTAALFNCVNW 130 (465)
Q Consensus 58 ~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~-~------~~~di~~aC~gg~~AL~~A~~~ 130 (465)
..|++++|+++|++++|||.+.+. +..........+.||+ ... + ..+-.-.+++|....+..+..
T Consensus 308 ~~a~~~al~~Agl~~~dId~~e~h-----daf~~~~l~~~~~lg~--~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~- 379 (407)
T 3svk_A 308 TPATRKVLDRAGLTIDDIDLFELN-----EAFASVVLKFQKDLNI--PDEKLNVNGGAIAMGHPLGATGAMITGTMVDE- 379 (407)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEC-----CSBHHHHHHHHHHHTC--CGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEe-----ChhHHHHHHHHHHhCC--CCCCCCCCCcHhheeCcHHHHHHHHHHHHHHH-
Confidence 578999999999999999999974 2222233345677886 211 1 011111244444444444444
Q ss_pred HHcCCCCCCEEEEEEeccccccCCCCCcccccceeeeeecC
Q 012353 131 VESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP 171 (465)
Q Consensus 131 l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGA~A~Ll~~ 171 (465)
|+.. ++++.|+... .+|..++|+||++
T Consensus 380 L~~~--~~~~gl~~~c------------~ggG~g~a~~~e~ 406 (407)
T 3svk_A 380 LERR--NARRALITLC------------IGGGMGVATIIER 406 (407)
T ss_dssp HHHH--TCCEEEEEEE------------CSSSCEEEEEEEE
T ss_pred HHhc--CCCEEEEEee------------ccCcceEEEEEEc
Confidence 4433 2377776442 2455567777754
No 87
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=86.50 E-value=2.1 Score=41.46 Aligned_cols=81 Identities=11% Similarity=0.089 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCC-Cce-eEe-ecC-cChhHHHHHHHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIE-GVD-STN-ACYGGTAALFNCVNW 130 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~-~~~-~~d-i~~-aC~gg~~AL~~A~~~ 130 (465)
....++.+++|+++|++++|||.++...... .+--.+.+.||+ .. ++. .++ ++| .+++...+|. .+
T Consensus 224 ~~~~~~i~~aL~~agl~~~did~~~~H~~~~-----~~~d~~~~~lg~--~~~~~~~~~~~~Gnt~sAs~~~~L~---~~ 293 (331)
T 2x3e_A 224 TQMSDSVRRVLDRVGWQASDLHHLVPHQANT-----RILAAVADQLDL--PVERVVSNIAEVGNTVAASIPLALA---HG 293 (331)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECCCCH-----HHHHHHHHHHTC--CGGGBCCCHHHHCBCGGGHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH-----HHHHHHHHHcCC--CHHHHhhhHhhhCcHHHHHHHHHHH---HH
Confidence 4566788999999999999999988643221 122348889997 32 222 122 222 3333333443 33
Q ss_pred HHcCC-CCCCEEEEEE
Q 012353 131 VESSS-WDGRYGLVVC 145 (465)
Q Consensus 131 l~sg~-~~~~~aLVVa 145 (465)
++.+. .+|+++|+++
T Consensus 294 ~~~~~~~~G~~vll~~ 309 (331)
T 2x3e_A 294 LRQGILRDGGNMVLTG 309 (331)
T ss_dssp HHTTCSCTTCEEEEEE
T ss_pred HHhCCCCCCCEEEEEE
Confidence 45553 3678999887
No 88
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=86.20 E-value=2.7 Score=40.81 Aligned_cols=84 Identities=14% Similarity=0.040 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec--CcChhHHHHHHHHHHHH
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST--NACYGGTAALFNCVNWV 131 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~--~aC~gg~~AL~~A~~~l 131 (465)
+....++++++|+++|++++|||.++...-. +.+-..+++.||+ +..-....+. ..|++...-+.++ .++
T Consensus 223 ~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~-----~~i~~~~~~~lgl--~~ek~~~~l~~~GNt~sasi~~~L~-~~~ 294 (323)
T 3il3_A 223 VRELSNVVEETLLANNLDKKDLDWLVPHQAN-----LRIITATAKKLEM--DMSQVVVTLDKYANNSAATVPVALD-EAI 294 (323)
T ss_dssp HHHHHHHHHHHHHTTTCCTTTCCEEEECCSC-----HHHHHHHHHHTTC--CGGGBCCCHHHHCBCGGGHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC-----HHHHHHHHHHcCc--CHHHhhccHhhcCchHHHHHHHHHH-HHH
Confidence 3444567889999999999999998864332 2345578889997 3322222232 3444444333332 234
Q ss_pred HcCC-CCCCEEEEEE
Q 012353 132 ESSS-WDGRYGLVVC 145 (465)
Q Consensus 132 ~sg~-~~~~~aLVVa 145 (465)
+.|. .+|+++|+++
T Consensus 295 ~~g~~~~Gd~vll~~ 309 (323)
T 3il3_A 295 RDGRIQRGQLLLLEA 309 (323)
T ss_dssp HTTSSCTTCEEEEEE
T ss_pred HcCCCCCCCEEEEEE
Confidence 5543 3778998887
No 89
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=86.15 E-value=2.1 Score=41.92 Aligned_cols=81 Identities=11% Similarity=0.123 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCc-eeEee---cC-cChhHHHHHHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI-EGVDS---TN-ACYGGTAALFNCVN 129 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~-~~~di---~~-aC~gg~~AL~~A~~ 129 (465)
....++++++|+++|++++|||.+++... .+.+-..+++.||+ +..- ....+ +| ++++-..+|..
T Consensus 249 ~~~~~~i~~~L~~~gl~~~did~~v~Hq~-----~~~i~~~~~~~Lgl--~~~~~~~~~l~~~GNtssasi~~~L~~--- 318 (350)
T 4ewp_A 249 WSMAKVAREALDAAGVEPEDLAAFIPHQA-----NMRIIDEFAKQLKL--PESVVVARDIADAGNTSAASIPLAMHR--- 318 (350)
T ss_dssp HTHHHHHHHHHHHHTCCGGGEEEEEECCS-----CHHHHHHHHHHTTC--CTTSEECCTHHHHCBCGGGHHHHHHHH---
T ss_pred HhhhHHHHHHHHhhcCChhHhceEEecCC-----CHHHHHHHHHHcCc--ChHhEEecccccccchHHHHHHHHHHH---
Confidence 44557789999999999999999886432 23445568899998 3332 22122 22 33333334433
Q ss_pred HHHcCC-CCCCEEEEEE
Q 012353 130 WVESSS-WDGRYGLVVC 145 (465)
Q Consensus 130 ~l~sg~-~~~~~aLVVa 145 (465)
+++.|. .+|+++|+++
T Consensus 319 ~~~~g~~~~Gd~vll~~ 335 (350)
T 4ewp_A 319 LLEENPELSGGLALQIG 335 (350)
T ss_dssp HHHHCGGGTTSEEEEEE
T ss_pred HHHhCCCCCcCEEEEEE
Confidence 344442 2678998887
No 90
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=86.13 E-value=2.2 Score=40.67 Aligned_cols=83 Identities=11% Similarity=0.102 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCce-eEeecCcChhHHHHHHHHHHHHHcC
Q 012353 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE-GVDSTNACYGGTAALFNCVNWVESS 134 (465)
Q Consensus 56 la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~-~~di~~aC~gg~~AL~~A~~~l~sg 134 (465)
...++.+++|+++|++++|||.++...... ..-..+.+.||+. ...+. .+.-...|.+....+.++ ..++.+
T Consensus 211 ~~~~~i~~al~~agl~~~did~~~~H~~~~-----~~~~~~~~~lg~~-~~~~~~~~~~~Gh~~~As~~~~L~-~~~~~g 283 (309)
T 2ebd_A 211 SMEEVCREVLEKAGVKPEEVSLVIPHQANV-----RIINALAEKLNIP-KEKVFVNIQKYGNTSAASIPIALH-EAIKEG 283 (309)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEECCSCH-----HHHHHHHHHTTCC-GGGBCCCHHHHCBCGGGHHHHHHH-HHHHTT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcCCCH-----HHHHHHHHHhCCC-HHHhhhhHhhhcchHHHHHHHHHH-HHHHcC
Confidence 456789999999999999999988643221 1223478889872 11222 111112333333333332 334444
Q ss_pred C-CCCCEEEEEE
Q 012353 135 S-WDGRYGLVVC 145 (465)
Q Consensus 135 ~-~~~~~aLVVa 145 (465)
. .+|+++|+++
T Consensus 284 ~~~~G~~~l~~~ 295 (309)
T 2ebd_A 284 KVKRGDLILMTA 295 (309)
T ss_dssp CCCTTCEEEEEE
T ss_pred CCCCCCEEEEEE
Confidence 3 2678998887
No 91
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=85.97 E-value=2.8 Score=40.11 Aligned_cols=82 Identities=11% Similarity=0.047 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCce-eEeecC--cChhHHHHHHHHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE-GVDSTN--ACYGGTAALFNCVNWV 131 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~-~~di~~--aC~gg~~AL~~A~~~l 131 (465)
.-..++.+++|+++|++++|||.++...... ..--.+.+.||+. ..+.. .+.... .+++...+|.. ++
T Consensus 212 ~~~~~~i~~al~~agl~~~did~~~~H~~~~-----~~~d~~~~~lg~~-~~~~~~~~~~~Gh~~~as~~~~L~~---~~ 282 (313)
T 1zow_A 212 RIMGDASTRVVEKANLTSDDIDLFIPHQANI-----RIMESARERLGIS-KDKMSVSVNKYGNTSAASIPLSIDQ---EL 282 (313)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEECCSCH-----HHHHHHHHHHTCC-GGGBCCCHHHHCBCGGGHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH-----HHHHHHHHHhCCC-HHHHHHhHhhhCchHHHHHHHHHHH---HH
Confidence 3556788999999999999999988643321 2223467888872 11222 111112 33334444433 34
Q ss_pred HcCC-CCCCEEEEEE
Q 012353 132 ESSS-WDGRYGLVVC 145 (465)
Q Consensus 132 ~sg~-~~~~~aLVVa 145 (465)
+.+. .+|+++|+++
T Consensus 283 ~~~~~~~g~~vl~~~ 297 (313)
T 1zow_A 283 KNGKLKDDDTIVLVG 297 (313)
T ss_dssp HTTCCCTTCEEEEEE
T ss_pred HcCCCCCCCEEEEEE
Confidence 5543 2678998887
No 92
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=85.94 E-value=1.6 Score=43.78 Aligned_cols=41 Identities=15% Similarity=0.097 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcc
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
...|++++|+++|++|+|||.+.+. +........+.+.||+
T Consensus 294 ~~~a~~~al~~agl~~~dId~ve~~-----d~fa~~~~~~~~~lg~ 334 (394)
T 3ss6_A 294 PAPAIRKGLEKVDWSLEDADLLEIN-----EAFAAQYLAVEKELDL 334 (394)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEC-----CSBHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeC-----CchHHHHHHHHHHhCC
Confidence 3678899999999999999999952 2223445567888886
No 93
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=85.84 E-value=2.8 Score=41.42 Aligned_cols=84 Identities=11% Similarity=-0.028 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec--CcChhHHHHHHHHHHHH
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST--NACYGGTAALFNCVNWV 131 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~--~aC~gg~~AL~~A~~~l 131 (465)
.....++++++|+++|++++|||.++.... .+.+-..+++.||+ +..-....+. ..|++...-+.+ ..++
T Consensus 265 ~~~~~~~i~~~L~~~gl~~~did~~v~Hq~-----n~~i~~~~~~~Lgl--~~ek~~~~l~~~GNtssAsipl~L-~~~~ 336 (365)
T 3gwa_A 265 LAEVPRAADRLLALAGEPRENIDCFVLHQA-----NRFMLDALRKKMKI--PEHKFPVLMEHCGNTVSSTLPLAL-ETMR 336 (365)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEECCC-----CHHHHHHHHHHHTC--CGGGSCCCCTTTCBCGGGHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHHHHHHHHhCC--CHHHHHHHHhcccchHHHHHHHHH-HHHH
Confidence 344557788999999999999999986432 23345678899998 3322222232 344443333322 2345
Q ss_pred HcCC-CCCCEEEEEE
Q 012353 132 ESSS-WDGRYGLVVC 145 (465)
Q Consensus 132 ~sg~-~~~~~aLVVa 145 (465)
+.|. .+|+++|+++
T Consensus 337 ~~g~~~~Gd~vll~~ 351 (365)
T 3gwa_A 337 ANGTLARGMRLMLLG 351 (365)
T ss_dssp HTTCCCTTCEEEEEE
T ss_pred HcCCCCCCCEEEEEE
Confidence 5553 3678999887
No 94
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=85.75 E-value=2.7 Score=41.11 Aligned_cols=83 Identities=5% Similarity=-0.040 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEee--cCcChhHHHHHHHHHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS--TNACYGGTAALFNCVNWVE 132 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di--~~aC~gg~~AL~~A~~~l~ 132 (465)
....++.+++|+++|++++|||.++.... .+.+-..+++.||+ ...-....+ -..|++...-+.++. +++
T Consensus 246 ~~~~~~i~~~l~~~gl~~~did~~v~Hq~-----~~~i~~~~~~~lgl--~~ek~~~~l~~~GNt~sasi~~~L~~-~~~ 317 (345)
T 3s21_A 246 KLAQKTFVAAKQVLGWAVEELDQFVIHQV-----SRPHTAAFVKSFGI--DPAKVMTIFGEHGNIGPASVPIVLSK-LKE 317 (345)
T ss_dssp HHHHHHHHHHHHHHCCCGGGCSEEEECCS-----CHHHHHHHHHHHTC--CGGGBCCCHHHHCBCGGGHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEeCCC-----CHHHHHHHHHHcCc--CHHHceeeHhhcCchHHHHHHHHHHH-HHH
Confidence 34456778999999999999999986432 22344568889998 332211222 133444333333322 344
Q ss_pred cCC-CCCCEEEEEE
Q 012353 133 SSS-WDGRYGLVVC 145 (465)
Q Consensus 133 sg~-~~~~~aLVVa 145 (465)
.|. .+|+++|+++
T Consensus 318 ~g~~~~Gd~vll~~ 331 (345)
T 3s21_A 318 LGRLKKGDRIALLG 331 (345)
T ss_dssp HTCCCTTCEEEEEE
T ss_pred cCCCCCCCEEEEEE
Confidence 442 3778999887
No 95
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=85.54 E-value=2.4 Score=40.73 Aligned_cols=79 Identities=16% Similarity=0.085 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEee----c-CcChhHHHHHHHHHHH
Q 012353 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS----T-NACYGGTAALFNCVNW 130 (465)
Q Consensus 56 la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di----~-~aC~gg~~AL~~A~~~ 130 (465)
...++.+++|+++|++++|||.++...... .+--.+.+.||+ ... ....+ + ..+++...+|. .+
T Consensus 219 ~~~~~i~~aL~~agl~~~did~v~~H~~~~-----~~~d~i~~~lg~--~~~-~~~~~~~~~Gn~~~As~~~~L~---~~ 287 (317)
T 1hnj_A 219 ELAHIVDETLAANNLDRSQLDWLVPHQANL-----RIISATAKKLGM--SMD-NVVVTLDRHGNTSAASVPCALD---EA 287 (317)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEECCSCH-----HHHHHHHHHTTC--CGG-GBCCCHHHHCBCGGGHHHHHHH---HH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcCCCH-----HHHHHHHHHcCC--CHH-HhHhhHhhhCcHHHHHHHHHHH---HH
Confidence 456788999999999999999988643211 122357888987 222 11222 2 23333343443 33
Q ss_pred HHcCC-CCCCEEEEEE
Q 012353 131 VESSS-WDGRYGLVVC 145 (465)
Q Consensus 131 l~sg~-~~~~~aLVVa 145 (465)
++.+. .+|+++|+++
T Consensus 288 ~~~~~~~~G~~vll~~ 303 (317)
T 1hnj_A 288 VRDGRIKPGQLVLLEA 303 (317)
T ss_dssp HHTTCSCTTCEEEEEE
T ss_pred HHhCCCCCCCEEEEEE
Confidence 45543 3788999987
No 96
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=85.52 E-value=2.8 Score=40.79 Aligned_cols=83 Identities=14% Similarity=0.006 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec--CcChhHHHHHHHHHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST--NACYGGTAALFNCVNWVE 132 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~--~aC~gg~~AL~~A~~~l~ 132 (465)
....++.+++|+++|++++|||.++..... +.+-..+++.||+ ...-....+. ..|++...-+.+ ..+++
T Consensus 234 ~~~~~~i~~~l~~~gl~~~did~~~~Hq~~-----~~i~~~~~~~lgl--~~~~~~~~l~~~GNt~sasi~~~L-~~~~~ 305 (333)
T 4dfe_A 234 NVLEKVAVEALEKANLSAEQIDWLIPHQAN-----IRIMQSTCRKLGL--PQERMIVTVGEHGNTSAASIPLAL-DVAVR 305 (333)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEECCSC-----HHHHHHHHHHTTC--CGGGBCCCHHHHCBCGGGHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCCC-----HHHHHHHHHHhCC--CHHHhhhhHHhcCchHHHHHHHHH-HHHHH
Confidence 455677889999999999999998864322 2345678889997 3322222222 233333332222 23455
Q ss_pred cCC-CCCCEEEEEE
Q 012353 133 SSS-WDGRYGLVVC 145 (465)
Q Consensus 133 sg~-~~~~~aLVVa 145 (465)
.|. .+|+++|+++
T Consensus 306 ~g~~~~Gd~vll~~ 319 (333)
T 4dfe_A 306 DGRIKRGQNVLIEG 319 (333)
T ss_dssp TTCSCTTCEEEEEE
T ss_pred cCCCCCCCEEEEEE
Confidence 553 3678898887
No 97
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=85.51 E-value=2.5 Score=42.42 Aligned_cols=93 Identities=13% Similarity=0.183 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEe-------ec--CcChhHHHHHHHH
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVD-------ST--NACYGGTAALFNC 127 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~d-------i~--~aC~gg~~AL~~A 127 (465)
...|++++|+++|++++|||.+.+.-. .........+.||+. .+-..+. ++ .+++|. ..+-.+
T Consensus 298 ~~~a~~~al~~Agl~~~dId~ie~hea-----fa~~~l~~~~~lg~~--~~~~~vn~~Gg~~a~GHp~gAsG~-~~~~~~ 369 (401)
T 1ulq_A 298 PVPATRKALERAGLSFSDLGLIELNEA-----FAAQALAVLREWSLS--MEDQRLNPNGGAIALGHPLGASGA-RILTTL 369 (401)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEECCS-----BHHHHHHHHHHHTCC--TTCTTBSTTCCHHHHCCCHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEecc-----hHHHHHHHHHHcCCC--CCCCccCCCCcccccCCCcchHHH-HHHHHH
Confidence 368999999999999999999987511 111222233557751 1111111 22 234343 334444
Q ss_pred HHHHHcCCCCCCEEEEEEeccccccCCCCCcccccceeeeeecC
Q 012353 128 VNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGP 171 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVasD~~~y~~~~~~~t~GdGA~A~Ll~~ 171 (465)
...|+.+ +.+++|+... .+|...+|+||++
T Consensus 370 ~~~L~~~--~~~~gl~~~~------------~ggG~~~a~v~~~ 399 (401)
T 1ulq_A 370 VHEMRRR--KVQFGLATMC------------IGVGQGIAVVVEG 399 (401)
T ss_dssp HHHHHHT--TCSEEEEEEE------------ETTTEEEEEEEEE
T ss_pred HHHHhhc--CCCEEEEEee------------cCCcccEEEEEEe
Confidence 4455555 3488887542 2444556777754
No 98
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=85.17 E-value=3.5 Score=40.04 Aligned_cols=81 Identities=16% Similarity=0.106 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCC-ceeE---eecC-cChhHHHHHHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTD-IEGV---DSTN-ACYGGTAALFNCVN 129 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~-~~~~---di~~-aC~gg~~AL~~A~~ 129 (465)
....++.+++|+++|++++|||.++...... .+--.+.+.||+ ... -... +++| .+++...+|. .
T Consensus 231 ~~~~~~i~~aL~~agl~~~did~v~~H~~~~-----~~~d~i~~~lg~--~~~~~~~~~~~~~Gn~~sAs~~~~L~---~ 300 (339)
T 1mzj_A 231 ADVVPAAREALEVAGLTVGDLVAFVPHQANL-----RIIDVLVDRLGV--PEHVVVSRDAEDTGNTSSASVALALD---R 300 (339)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCSEEEECCSCH-----HHHHHHHHHHTC--CTTSEECCTHHHHCBCTTHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCCH-----HHHHHHHHHhCC--CccceeeehhhhcCchHHHHHHHHHH---H
Confidence 4566788999999999999999988643221 122358889997 332 1111 1222 3333333443 3
Q ss_pred HHHcCC-CCCCEEEEEE
Q 012353 130 WVESSS-WDGRYGLVVC 145 (465)
Q Consensus 130 ~l~sg~-~~~~~aLVVa 145 (465)
+++.+. .+|+++|+++
T Consensus 301 ~~~~g~~~~G~~vll~~ 317 (339)
T 1mzj_A 301 LVRSGAVPGGGPALMIG 317 (339)
T ss_dssp HHHHTSSCTTCEEEEEE
T ss_pred HHHcCCCCCCCEEEEEE
Confidence 345543 2678999887
No 99
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=84.47 E-value=1.6 Score=43.67 Aligned_cols=41 Identities=7% Similarity=0.184 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcc
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
...|++++|+++|++++|||.+.+. +......-.+.+.||+
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ie~~-----d~f~~~~l~~~~~lg~ 337 (397)
T 1wl4_A 297 PIPAIKQAVTKAGWSLEDVDIFEIN-----EAFAAVSAAIVKELGL 337 (397)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEC-----CSBHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEe-----cccHHHHHHHHHHcCC
Confidence 4678999999999999999999952 2222334457788886
No 100
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=83.53 E-value=2.3 Score=42.41 Aligned_cols=41 Identities=12% Similarity=0.054 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcc
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
...|++++|+++|++|+|||.+.+.-.. ........+.||+
T Consensus 284 ~~~a~~~al~~agl~~~did~ve~h~~f-----~~~~~~~~~~lg~ 324 (387)
T 3goa_A 284 PVPASKLALKKAGLSASDIDVFEMNEAF-----AAQILPCIKDLGL 324 (387)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCSB-----HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEeCcc-----hHHHHHHHHHhCC
Confidence 4688999999999999999999864221 1223345566775
No 101
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=83.40 E-value=3.2 Score=39.95 Aligned_cols=83 Identities=17% Similarity=0.118 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCC-Cce-eEeecCcChhHHHHHHHHHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIE-GVDSTNACYGGTAALFNCVNWVE 132 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~-~~~-~~di~~aC~gg~~AL~~A~~~l~ 132 (465)
....++.+++|+++|++++|||.++...... ..--.+.+.||+ .. .+. .+.....|.+....+.++ ..++
T Consensus 220 ~~~~~~i~~al~~agl~~~did~~~~H~~~~-----~~~d~~~~~lg~--~~~~~~~~~~~~Gh~~~As~~~~l~-~~l~ 291 (322)
T 1ub7_A 220 RVMNTATLEAIEKAGLTPEDIRLFVPHQANL-----RIIDAARERLGL--PWERVAVNVDRYGNTSTASIPLALK-EAVD 291 (322)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECCSCH-----HHHHHHHHTTTC--CGGGBCCCHHHHCBCGGGHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH-----HHHHHHHHHcCC--CHHHHHHHHHhhCcHHHHHHHHHHH-HHHH
Confidence 4566788999999999999999988643221 112247888886 22 222 111112343333333333 3345
Q ss_pred cCC-CCCCEEEEEE
Q 012353 133 SSS-WDGRYGLVVC 145 (465)
Q Consensus 133 sg~-~~~~~aLVVa 145 (465)
.+. .+|+++|+++
T Consensus 292 ~g~~~~g~~~l~~~ 305 (322)
T 1ub7_A 292 AGRIREGDHVLLVS 305 (322)
T ss_dssp HTSSCTTCEEEEEE
T ss_pred hCCCCCCCEEEEEE
Confidence 553 2678898887
No 102
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=83.18 E-value=4.3 Score=39.21 Aligned_cols=81 Identities=14% Similarity=0.142 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCC-ceeEee---cC-cChhHHHHHHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTD-IEGVDS---TN-ACYGGTAALFNCVN 129 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~-~~~~di---~~-aC~gg~~AL~~A~~ 129 (465)
....++++++|+++|++++|||.++...... ..--.+.+.||+ ... .....+ +| .+++...+|. .
T Consensus 232 ~~~~~~i~~al~~agl~~~dId~~~~H~~~~-----~~~~~~~~~lg~--~~~~~~~~~~~~~Gnt~sAs~~~~L~---~ 301 (335)
T 1u6e_A 232 FKMGDVGRRAMDAAGVRPDQIDVFVPHQANS-----RINELLVKNLQL--RPDAVVANDIEHTGNTSAASIPLAMA---E 301 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEECCSCH-----HHHHHHHHHHTC--CTTCEECCTHHHHCBCGGGHHHHHHH---H
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCCH-----HHHHHHHHHcCC--CchhhhhhhhhhhCcHHHHHHHHHHH---H
Confidence 4556788999999999999999988643321 223347888997 332 111112 22 3333333333 3
Q ss_pred HHHcCC-CCCCEEEEEE
Q 012353 130 WVESSS-WDGRYGLVVC 145 (465)
Q Consensus 130 ~l~sg~-~~~~~aLVVa 145 (465)
+++.+. .+|+++|+++
T Consensus 302 ~~~~~~~~~g~~~l~~~ 318 (335)
T 1u6e_A 302 LLTTGAAKPGDLALLIG 318 (335)
T ss_dssp HHHHTSSCTTCEEEEEE
T ss_pred HHHcCCCCCCCEEEEEE
Confidence 344442 2678999887
No 103
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=82.94 E-value=3.3 Score=40.89 Aligned_cols=81 Identities=11% Similarity=0.015 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec--C--cChhHHHHHHHHHH
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST--N--ACYGGTAALFNCVN 129 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~--~--aC~gg~~AL~~A~~ 129 (465)
.....++++++|+++|++++|||.++...-. +.+-..+++.||+ ...-....+. . ++++-..+|..+.
T Consensus 253 ~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n-----~~i~~~~~~~lgl--~~ek~~~~l~~~GNt~sAsi~l~L~~~~- 324 (359)
T 3h78_A 253 SQTLVRIAGEMLAAHELTLDDIDHVICHQPN-----LRILDAVQEQLGI--PQHKFAVTVDRLGNMASASTPVTLAMFW- 324 (359)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEEECCSC-----HHHHHHHHHHHTC--CGGGBCCCHHHHCBCGGGHHHHHHHHHG-
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCC-----HHHHHHHHHHhCc--CHHHhhhhhhcccchHHHHHHHHHHHHH-
Confidence 3445578899999999999999998864322 3345678889998 3322222232 3 3334444444433
Q ss_pred HHHcCCCCCCEEEEEE
Q 012353 130 WVESSSWDGRYGLVVC 145 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVa 145 (465)
+. ..+|+++|+++
T Consensus 325 --~~-l~~Gd~vll~~ 337 (359)
T 3h78_A 325 --PD-IQPGQRVLVLT 337 (359)
T ss_dssp --GG-SCTTCEEEEEE
T ss_pred --Hh-CCCCCEEEEEE
Confidence 33 33779999887
No 104
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=82.73 E-value=5.4 Score=41.52 Aligned_cols=84 Identities=13% Similarity=0.005 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCC----Cce--eEeecC-cChhHHHHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT----DIE--GVDSTN-ACYGGTAALFNC 127 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~----~~~--~~di~~-aC~gg~~AL~~A 127 (465)
.-...|++++|+++|++++|||.+.+. +-.+...-...+.||+.... ++. ...+++ ..++|+.++-.+
T Consensus 317 ~~~~~a~~~al~~agl~~~did~~E~~-----dAF~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~ 391 (520)
T 4egv_A 317 PASVTAVNEALRVAGIGLDDVAAFDLY-----SCFPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEA 391 (520)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEEEC-----CSSSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCHHHCCEEEEe-----CCcHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHH
Confidence 345678999999999999999999985 33455666778889872110 110 111232 234566777777
Q ss_pred HHHHHcCCCCCCEEEEEE
Q 012353 128 VNWVESSSWDGRYGLVVC 145 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVa 145 (465)
..-|+.+ .+++.|+.+
T Consensus 392 v~~lr~~--~~~~~L~~~ 407 (520)
T 4egv_A 392 VNEMRDK--PGQFALVGA 407 (520)
T ss_dssp HHHHHHS--TTCEEEEEE
T ss_pred HHHHhcC--CCCceEEeC
Confidence 7777877 569999864
No 105
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=81.60 E-value=3 Score=41.64 Aligned_cols=41 Identities=10% Similarity=0.149 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcc
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
...|++++|+++|++|+|||.+.+. +........+.+.||+
T Consensus 287 ~~~a~~~al~~Agl~~~dId~ve~~-----d~f~~~~~~~~~~lg~ 327 (390)
T 1wdk_C 287 PVPATQKALKRAGLNMADIDFIELN-----EAFAAQALPVLKDLKV 327 (390)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEC-----CSBHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCChhhCcEEEec-----cCCHHHHHHHHHHcCC
Confidence 3679999999999999999999853 1121233455677775
No 106
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=79.11 E-value=3.3 Score=41.26 Aligned_cols=81 Identities=10% Similarity=-0.012 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCC-Cce----eE-eecCcChhHHHHHHHHHH
Q 012353 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIE----GV-DSTNACYGGTAALFNCVN 129 (465)
Q Consensus 56 la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~-~~~----~~-di~~aC~gg~~AL~~A~~ 129 (465)
...++.+++|+++|++++|||.++..... ..+--.+.+.||+ .. .+. .+ +++| |++...-+. -..
T Consensus 288 ~~~~~i~~aL~~agl~~~dId~~~~H~~~-----~~i~d~~~~~lgl--~~~k~~~s~~~~~~~GN-t~sAsi~~~-L~~ 358 (393)
T 1ted_A 288 GVAPVVTEMLWDNGLQISDIDLWAIHPGG-----PKIIEQSVRSLGI--SAELAAQSWDVLARFGN-MLSVSLIFV-LET 358 (393)
T ss_dssp HHHHHHHHHHHHTTCCGGGCSCEEECCSC-----HHHHHHHHHHHTC--CGGGGHHHHHHHHHHCB-CTHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHcCCCHhHCCEEEECCCc-----HHHHHHHHHHcCC--CHHHHHHHHHHHHhhCC-chHhHHHHH-HHH
Confidence 44567789999999999999998863322 1233457888997 32 221 12 2233 333333232 234
Q ss_pred HHHcCCC--CCCEEEEEE
Q 012353 130 WVESSSW--DGRYGLVVC 145 (465)
Q Consensus 130 ~l~sg~~--~~~~aLVVa 145 (465)
+++.+.. +|+++|+++
T Consensus 359 ~~~~g~~~~~Gd~vll~~ 376 (393)
T 1ted_A 359 MVQQAESAKAISTGVAFA 376 (393)
T ss_dssp HHHSCSSSSSSEEEEEEE
T ss_pred HHhcCccCCCCCeEEEEE
Confidence 4566653 678899887
No 107
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=77.86 E-value=5.4 Score=39.71 Aligned_cols=41 Identities=15% Similarity=0.197 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcc
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
...|++++|+++|++++|||.+.+. |.....+-...+.||+
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ie~~-----D~f~~~~l~~~e~lg~ 337 (395)
T 2ib8_A 297 PVYAASMVLKDVGLKKEDIAMWEVN-----EAFSLVVLANIKMLEI 337 (395)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEEC-----CSBHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEc-----cccHHHHHHHHHHcCC
Confidence 4679999999999999999999952 3222223233344886
No 108
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=76.88 E-value=1.5 Score=43.92 Aligned_cols=100 Identities=12% Similarity=-0.042 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHH-------HHHHHHhcccCCC-Cc-eeEeecCcChhHHHH
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIK-------TFLMQIFEKFGNT-DI-EGVDSTNACYGGTAA 123 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a-------~~l~~~LGl~g~~-~~-~~~di~~aC~gg~~A 123 (465)
......++.+++|+++|++++|||.+++..-..-...++.. ..+.+.||+ .. .. ..++--..|+++..-
T Consensus 210 ~~~~~~~~~~~~l~~~g~~~~did~~v~Hqp~~k~~~ka~~ril~~~~~~~~~~l~~--~~e~~~~~~~~~GN~~sASi~ 287 (388)
T 3v4n_A 210 YIQSFAQVWDEHKKRTGLDFADYDALAFHIPYTKMGKKALLAKISDQTEAEQERILA--RYEESIIYSRRVGNLYTGSLY 287 (388)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGCSEEEECCSSHHHHHHHHHHHSTTSCHHHHHHHHH--HHHHHTTTGGGTCCCGGGHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCCEEEeCCCcchHHHHHHHHHHhcccHHHHHHhCC--CHHHHhhHHHhcCchHHHHHH
Confidence 35666778899999999999999999875522110001111 235666765 11 11 111212334444443
Q ss_pred HHHHHHHHHc-C-CCCCCEEEEEEeccccccCCCCCcccccceeeeee
Q 012353 124 LFNCVNWVES-S-SWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLV 169 (465)
Q Consensus 124 L~~A~~~l~s-g-~~~~~~aLVVasD~~~y~~~~~~~t~GdGA~A~Ll 169 (465)
+.++.. ++. | ..+|+++|+++ ||.|..+-+.
T Consensus 288 l~L~~~-l~~~g~~~~Gd~ill~s--------------~GsG~~ae~~ 320 (388)
T 3v4n_A 288 LGLISL-LENATTLTAGNQIGLFS--------------YGSGAVAEFF 320 (388)
T ss_dssp HHHHHH-HHHCSSCCTTCEEEEEE--------------EETTTEEEEE
T ss_pred HHHHHH-HHhcCcCCCCCEEEEEE--------------ecCcceeEEE
Confidence 333332 333 3 23788999888 8888887544
No 109
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=76.47 E-value=2.8 Score=41.25 Aligned_cols=81 Identities=9% Similarity=-0.036 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEee---c-CcChhHHHHHHHHH-
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS---T-NACYGGTAALFNCV- 128 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di---~-~aC~gg~~AL~~A~- 128 (465)
.....++++++|+++|++++|||.++...- .+.+-..+++.||+ ...-....+ + .++++-..+|..+.
T Consensus 243 ~~~~~~~i~~~l~~~gl~~~did~~v~Hq~-----~~~i~~~~~~~Lgl--~~ek~~~~l~~~GNt~sasi~~~L~~~~~ 315 (354)
T 4efi_A 243 LNAVPKLVSRTLDIAGRDKDSYDAFLFHQA-----NLFMLKHLAKKAGL--PAERVPVNIGEYGNTSCASIPLLITTELK 315 (354)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEECCC-----CHHHHHHHHHHTTC--CGGGSCCCHHHHCBCGGGHHHHHHHHHSH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEeCCC-----CHHHHHHHHHHhCc--CHHHHHHHHhhhCcHHHHHHHHHHHHHHH
Confidence 455567788999999999999999987432 22344568899998 332211222 2 24445555555443
Q ss_pred -HHHHcCCCCCCEEEEEE
Q 012353 129 -NWVESSSWDGRYGLVVC 145 (465)
Q Consensus 129 -~~l~sg~~~~~~aLVVa 145 (465)
..++ +|+++|+++
T Consensus 316 ~g~~~----~Gd~vll~~ 329 (354)
T 4efi_A 316 DRLKE----ETLQLGMFG 329 (354)
T ss_dssp HHHHH----SCEEEEEEE
T ss_pred hCCCC----CCCEEEEEE
Confidence 2344 557888887
No 110
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=74.08 E-value=1.7 Score=44.08 Aligned_cols=101 Identities=13% Similarity=0.036 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccH--------HHHHHHHhcccCCCC-c-eeEeecCcChhHHH
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSI--------KTFLMQIFEKFGNTD-I-EGVDSTNACYGGTA 122 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~--------a~~l~~~LGl~g~~~-~-~~~di~~aC~gg~~ 122 (465)
......++.+++|+++|++++|||.+++..-.+-...++. ...+++.||+ ... . ..++-...|+++..
T Consensus 239 ~~~~l~~~~~~~l~~~gl~~~Did~~v~Hqp~~k~~~ka~~ril~~~~~~~~~~~l~~--~~e~~~~~~~~~GNt~sASi 316 (425)
T 3sqz_A 239 YLDMLKTTWAEYQKRFDVSLTDFAAFCFHLPFPKLALKGFNKIMDKQVPSDLQEKLKV--NFEASILYSKQIGNIYTGSL 316 (425)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCSSHHHHHHHHHHHCCTTSCHHHHHHHHH--HHHHHHTTHHHHBCCGGGHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCCEEEECCCcchhHHHHHHHHHhccchHHHHHHhCC--CHHHHhhHHhccCccHHHHH
Confidence 3556667888999999999999999998652211000011 1145566665 211 1 11111123444443
Q ss_pred HHHHHHHHHHc-C-CCCCCEEEEEEeccccccCCCCCcccccceeeeeec
Q 012353 123 ALFNCVNWVES-S-SWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVG 170 (465)
Q Consensus 123 AL~~A~~~l~s-g-~~~~~~aLVVasD~~~y~~~~~~~t~GdGA~A~Ll~ 170 (465)
-|.++.. ++. | ..+|+++|+++ ||.|.+|-+.+
T Consensus 317 ~l~L~~~-l~~~g~l~~Gd~ill~s--------------~GsG~~ae~~s 351 (425)
T 3sqz_A 317 FLGLLSL-LENSQNLVAGDKIALFS--------------YGSGAVAEIFT 351 (425)
T ss_dssp HHHHHHH-HHHCSSCCTTCEEEEEE--------------EETTTEEEEEE
T ss_pred HHHHHHH-HHhcCCCCCCCEEEEEc--------------ccCCcceEEEE
Confidence 3333332 333 2 23789999888 88888875543
No 111
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=71.74 E-value=6.7 Score=39.48 Aligned_cols=41 Identities=12% Similarity=0.170 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcc
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
...|++++|+++|++++|||.+.+...+. .......+.||+
T Consensus 315 ~~~a~~~al~~Agl~~~dId~vE~h~af~-----~~~~~~~~~lg~ 355 (418)
T 2iik_A 315 PAYAIPVALQKAGLTVSDVDIFEINEAFA-----SQAAYCVEKLRL 355 (418)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEECCSBH-----HHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCHHHCCeeeeeccch-----HHHHHHHHHcCC
Confidence 35699999999999999999998754222 223344566776
No 112
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=70.68 E-value=5.8 Score=39.58 Aligned_cols=27 Identities=4% Similarity=-0.113 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHCCCCcCCccEEEEEe
Q 012353 56 MSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (465)
Q Consensus 56 la~~Aa~~aL~~agi~~~~Id~li~~T 82 (465)
...++.+++|+++|++++|||.+++..
T Consensus 208 ~~~~~~~~~L~~agl~~~did~~~~H~ 234 (396)
T 1xpm_A 208 SFQQSWNEYAKRQGKSLADFASLCFHV 234 (396)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecC
Confidence 466788999999999999999998753
No 113
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=70.34 E-value=5.9 Score=39.22 Aligned_cols=76 Identities=18% Similarity=0.120 Sum_probs=45.4
Q ss_pred HHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCC-Ccee----E-eecC-cChhHHHHHHHHHHHHH
Q 012353 60 AVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEG----V-DSTN-ACYGGTAALFNCVNWVE 132 (465)
Q Consensus 60 Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~-~~~~----~-di~~-aC~gg~~AL~~A~~~l~ 132 (465)
+.+++|+++|++++|||.++...... .+--.+.+.||+ .. .+.. + .++| ++++...+| ..+++
T Consensus 257 ~i~~aL~~agl~~~dId~v~~H~~~~-----~i~d~~~~~lgl--~~~k~~~s~~~~~~~Gnt~sAsi~~~L---~~~~~ 326 (382)
T 1u0m_A 257 ALKELAGEHGWDASDLDFYIVHAGGP-----RILDDLSTFLEV--DPHAFRFSRATLTEYGNIASAVVLDAL---RRLFD 326 (382)
T ss_dssp HHHHHHHTTSCCSSCCSCCEEECSHH-----HHHHHHHHHSCS--CGGGGHHHHHHHHHTCBCTTHHHHHHH---HHHHH
T ss_pred HHHHHHHHcCCCHHHCCEEEECCCCH-----HHHHHHHHHcCC--CHHHHHHHHHHHHHhCCchhhHHHHHH---HHHHH
Confidence 88999999999999999988643321 223357888987 32 2221 1 1222 333333333 34455
Q ss_pred cCC-CCCCEEEEEE
Q 012353 133 SSS-WDGRYGLVVC 145 (465)
Q Consensus 133 sg~-~~~~~aLVVa 145 (465)
.+. .+|+++|+++
T Consensus 327 ~g~~~~Gd~vll~~ 340 (382)
T 1u0m_A 327 EGGVEEGARGLLAG 340 (382)
T ss_dssp SCCCCSSCCCEEEE
T ss_pred hcCCCCCCEEEEEE
Confidence 552 2677888877
No 114
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=67.48 E-value=9 Score=38.92 Aligned_cols=25 Identities=12% Similarity=0.244 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHCCCCcCCccEEEEE
Q 012353 57 SLTAVTNLLEKYKIDPKQIGRLEVG 81 (465)
Q Consensus 57 a~~Aa~~aL~~agi~~~~Id~li~~ 81 (465)
...|++++|+++|++++|||.+.+.
T Consensus 317 ~~~A~~~Al~~AGl~~~DId~iE~h 341 (442)
T 2wu9_A 317 PAVAIPAAVKAAGLELDDIDLFEIN 341 (442)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEEC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEe
Confidence 4589999999999999999999864
No 115
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=67.05 E-value=8.5 Score=37.80 Aligned_cols=80 Identities=19% Similarity=0.101 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHCC------CCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCC-Ccee-Eee---cCcChhHHHHH
Q 012353 56 MSLTAVTNLLEKYK------IDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEG-VDS---TNACYGGTAAL 124 (465)
Q Consensus 56 la~~Aa~~aL~~ag------i~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~-~~~~-~di---~~aC~gg~~AL 124 (465)
....+.+++|+++| ++++|||.+ .. .++ ..+--.+.+.||+ .. ++.. .++ -..|++...-+
T Consensus 268 ~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H-~~~----~~i~d~~~~~lgl--~~~k~~~s~~~~~~~Gnt~sasi~~ 339 (374)
T 2h84_A 268 GIEAFVDTLLDKAKLQTSTAISAKDCEFL-IH-TGG----KSILMNIENSLGI--DPKQTKNTWDVYHAYGNMSSASVIF 339 (374)
T ss_dssp HHHHHHHHHHHHHTTTSCSCCCSSSSEEE-EC-CCC----HHHHHHHHHHTTC--CGGGGHHHHHHHHHHCBCTTHHHHH
T ss_pred HHHHHHHHHHHhcCCccccCCChhhcCEe-EC-CCC----HHHHHHHHHHcCC--CHHHHHHHHHHHHHhCCchhhHHHH
Confidence 34567789999999 999999999 43 222 1233458888997 32 2221 122 12333333222
Q ss_pred HHHHHHHHcCCCCCCEEEEEE
Q 012353 125 FNCVNWVESSSWDGRYGLVVC 145 (465)
Q Consensus 125 ~~A~~~l~sg~~~~~~aLVVa 145 (465)
.+ ..+++.+. +|+++|+++
T Consensus 340 ~L-~~~~~~~~-~Gd~vll~~ 358 (374)
T 2h84_A 340 VM-DHARKSKS-LPTYSISLA 358 (374)
T ss_dssp HH-HHHHTCSC-CCSEEEEEE
T ss_pred HH-HHHHhhcC-CCCeEEEEE
Confidence 22 23345666 789999887
No 116
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=65.36 E-value=9.2 Score=38.08 Aligned_cols=26 Identities=19% Similarity=0.275 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHCCCCcCCccEEEEE
Q 012353 56 MSLTAVTNLLEKYKIDPKQIGRLEVG 81 (465)
Q Consensus 56 la~~Aa~~aL~~agi~~~~Id~li~~ 81 (465)
-...|++++|+++|++++|||.+...
T Consensus 294 ~~~~a~~~al~~Agl~~~dId~ve~h 319 (393)
T 1afw_A 294 GPAYAIPKVLEATGLQVQDIDIFEIN 319 (393)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred hHHHHHHHHHHHcCCCHHHCCEEEEe
Confidence 34689999999999999999999864
No 117
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=59.95 E-value=7.3 Score=39.24 Aligned_cols=78 Identities=17% Similarity=0.172 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhcccCCCCceeEe----ecC-cChhHHHHHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVD----STN-ACYGGTAALFNCV 128 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~d----i~~-aC~gg~~AL~~A~ 128 (465)
.-...|++++|+++|++|+|||.|+ ++|.|+.- .+.....+.+.||.. ...+..-. +++ ..++|+..+-.+.
T Consensus 292 ~~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~~-d~~e~~a~~~~~g~~-~~~~~v~s~k~~~GH~~gAsG~~~~i~~~ 369 (427)
T 3ho9_A 292 AGAALAMANALRDAGIEASQIGYVNAHGTSTPAG-DKAEAQAVKTIFGEA-ASRVLVSSTKSMTGHLLGAAGAVESIYSI 369 (427)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHH-HHHHHHHHHHHHGGG-GGTSEEECTHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEecCCcCCCc-CHHHHHHHHHHhccc-CCCeEEecchHhhccCHHHHHHHHHHHHH
Confidence 3456789999999999999999998 45655432 345566678888751 12222211 222 3345555555555
Q ss_pred HHHHcC
Q 012353 129 NWVESS 134 (465)
Q Consensus 129 ~~l~sg 134 (465)
..|+.+
T Consensus 370 ~~l~~~ 375 (427)
T 3ho9_A 370 LALRDQ 375 (427)
T ss_dssp HHHHHT
T ss_pred HHHhcC
Confidence 556655
No 118
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=57.62 E-value=6.8 Score=39.83 Aligned_cols=46 Identities=15% Similarity=0.194 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHCCCCcCCccEEEE-EeecCCCCcccHHHHHHHHhcc
Q 012353 56 MSLTAVTNLLEKYKIDPKQIGRLEV-GSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 56 la~~Aa~~aL~~agi~~~~Id~li~-~T~s~~~~~ps~a~~l~~~LGl 102 (465)
-...|++++|+++|++|+|||.|+. +|.|+. ..+.-...+.+.+|.
T Consensus 309 ~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~-~d~~E~~al~~~~~~ 355 (451)
T 4ddo_A 309 GAMRAMKLALRMGDVAPEQVDYVNAHATSTPV-GDAGEIEALKTVFGV 355 (451)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCSCHH-HHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEecCCcCcc-cCHHHHHHHHHHhCC
Confidence 4568899999999999999999984 344432 123334456777764
No 119
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=57.02 E-value=17 Score=36.15 Aligned_cols=84 Identities=13% Similarity=0.201 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHh-ccc-CCCCce-eEeecCcCh--hHHHHHHHH
Q 012353 53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIF-EKF-GNTDIE-GVDSTNACY--GGTAALFNC 127 (465)
Q Consensus 53 ~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~L-Gl~-g~~~~~-~~di~~aC~--gg~~AL~~A 127 (465)
++....++++++|+++|++++|||.++...- .+.+-..++++| |+. ....+. .++--..|+ +-..+|..+
T Consensus 289 a~~~~~~~i~~~L~~~gl~~~dId~~v~Hqa-----n~~i~~~~~~~llgl~~~~~k~~~~l~~~GNtssAsipl~L~~~ 363 (392)
T 3led_A 289 VVPLVSEMIIEHAREIGIDPHGLKRMWLHQA-----NINMNEIIGRKVLGRDPTRDENVIILDDYANTSSAGSIIAFHKH 363 (392)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEEECSS-----CHHHHHHHHHHHHTSCCCTTTBCCCHHHHCBCGGGHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCcEEEEcCC-----CHHHHHHHHHHhcCCCCCHHHHHHHHhhhCccHHHHHHHHHHHH
Confidence 4555667789999999999999999886322 223444566664 741 012211 111113333 333444432
Q ss_pred HHHHHcCCCCCCEEEEEE
Q 012353 128 VNWVESSSWDGRYGLVVC 145 (465)
Q Consensus 128 ~~~l~sg~~~~~~aLVVa 145 (465)
.....+|+++|+++
T Consensus 364 ----~~~~~~Gd~vll~g 377 (392)
T 3led_A 364 ----QDDMAQGDLGLICS 377 (392)
T ss_dssp ----CTTCCTTCEEEEEE
T ss_pred ----hCCCCCCCEEEEEE
Confidence 11122678888887
No 120
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=56.37 E-value=15 Score=36.85 Aligned_cols=45 Identities=13% Similarity=0.157 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHCCCCcCCccEEEE-EeecCCCCcccHHHHHHHHhcc
Q 012353 56 MSLTAVTNLLEKYKIDPKQIGRLEV-GSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 56 la~~Aa~~aL~~agi~~~~Id~li~-~T~s~~~~~ps~a~~l~~~LGl 102 (465)
-...|++++|+++|++|+|||.++. +|.| ...+.....+.+.||.
T Consensus 294 ~~~~ai~~al~~Agl~~~dId~ve~HgtgT--~~d~~e~~al~~~~g~ 339 (428)
T 3kzu_A 294 GAQRCMVAALKRAGIVPDEIDYINAHGTST--MADTIELGAVERVVGE 339 (428)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCSS--TTHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHcCCCHHHeeEEEecCCcc--hhhHHHHHHHHHHhcc
Confidence 4568899999999999999999984 4555 2344455567777875
No 121
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=54.64 E-value=7.2 Score=38.93 Aligned_cols=78 Identities=14% Similarity=0.190 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEE-EeecCCCCcccHHHHHHHHhcccCCCCceeEe----ecC-cChhHHHHHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEV-GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVD----STN-ACYGGTAALFNCV 128 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~-~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~d----i~~-aC~gg~~AL~~A~ 128 (465)
.-...|.+++|+++|++|+|||.|.. +|.|+. .-+.....+.+.||.. ...+..-. +++ ..++|+..|-.+.
T Consensus 275 ~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~-gD~~E~~al~~~~g~~-~~~~~v~s~k~~~GH~~~AsG~~~li~~~ 352 (408)
T 1j3n_A 275 KGAALAMARALKDAGIAPEQVGYINAHGTSTPV-GDRAEVLAIKRVFGDH-AKRLMVSSTKSMIGHLLGAAGAVEAIATV 352 (408)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHH-HHHHHHHHHHHHHHHH-HTTCEEECTHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcc-cCHHHHHHHHHHhcCc-CCCceEECchhhhccCHHHHHHHHHHHHH
Confidence 34567899999999999999999984 344432 1223345567777751 12232221 222 3344555555555
Q ss_pred HHHHcC
Q 012353 129 NWVESS 134 (465)
Q Consensus 129 ~~l~sg 134 (465)
-.|+.+
T Consensus 353 l~l~~~ 358 (408)
T 1j3n_A 353 QALYHG 358 (408)
T ss_dssp HHHHHT
T ss_pred HHHhcC
Confidence 555554
No 122
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=53.07 E-value=13 Score=37.18 Aligned_cols=46 Identities=11% Similarity=0.073 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHCCCCcCCccEEEE-EeecCCCCcccHHHHHHHHhcc
Q 012353 56 MSLTAVTNLLEKYKIDPKQIGRLEV-GSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 56 la~~Aa~~aL~~agi~~~~Id~li~-~T~s~~~~~ps~a~~l~~~LGl 102 (465)
-...|.+++|+++|++|+|||.|.. +|.|+.- .+.-...+.+.+|.
T Consensus 280 ~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~-D~~E~~al~~~~g~ 326 (415)
T 1tqy_B 280 GLERAIRLALNDAGTGPEDVDVVFADGAGVPEL-DAAEARAIGRVFGR 326 (415)
T ss_dssp SHHHHHHHHHHHHTCCGGGCCEEECCCCCSHHH-HHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCCHhHCCEEEEeCCCCcCc-CHHHHHHHHHHhCC
Confidence 4567899999999999999999984 4544321 23345557777763
No 123
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=51.89 E-value=12 Score=37.35 Aligned_cols=47 Identities=21% Similarity=0.175 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhc
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFE 101 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LG 101 (465)
..-...|.+++|+++|++|+|||.|. ++|.|+.- .+.-...|.+.+|
T Consensus 278 ~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~-D~~E~~al~~~~~ 325 (412)
T 4ewg_A 278 ASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRG-DVAESQATARTFG 325 (412)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHH-HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCccc-cHHHHHHHHHHcC
Confidence 56677899999999999999999998 45555432 3344555777776
No 124
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=51.13 E-value=14 Score=41.43 Aligned_cols=80 Identities=13% Similarity=0.081 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhcccCCCCceeEee----cC-cChhHHHHHHHH
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS----TN-ACYGGTAALFNC 127 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di----~~-aC~gg~~AL~~A 127 (465)
..-...+.+++|+++|++|+|||.|. ++|.|+.- -|.-...|.+.|+-.....+..-.+ ++ -.++|+.+|-.+
T Consensus 268 ~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~g-D~~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~ 346 (965)
T 3hhd_A 268 GDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVG-DPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKV 346 (965)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCTTH-HHHHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHhccccccCCCCCCC-CHHHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHHH
Confidence 34567889999999999999999998 55666532 3455666777886311112222122 21 345566666666
Q ss_pred HHHHHcC
Q 012353 128 VNWVESS 134 (465)
Q Consensus 128 ~~~l~sg 134 (465)
.-.|+.+
T Consensus 347 ~l~l~~~ 353 (965)
T 3hhd_A 347 LLSLEHG 353 (965)
T ss_dssp HHHHHHT
T ss_pred HHHHhcC
Confidence 6666655
No 125
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=49.47 E-value=14 Score=36.94 Aligned_cols=78 Identities=12% Similarity=0.115 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEE-EeecCCCCcccHHHHHHHHhcccCCCCceeEe----ecC-cChhHHHHHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEV-GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVD----STN-ACYGGTAALFNCV 128 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~-~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~d----i~~-aC~gg~~AL~~A~ 128 (465)
.-...|.+++|+++|++|+|||.|+. +|.|+.- .+.-...|.+.||.. ...+..-. +++ ..++|+..+-.+.
T Consensus 281 ~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~~-D~~E~~al~~~~g~~-~~~~~v~s~k~~~GH~~gAaG~~~~i~~~ 358 (416)
T 1e5m_A 281 RGATRAIAWALKDSGLKPEMVSYINAHGTSTPAN-DVTETRAIKQALGNH-AYNIAVSSTKSMTGHLLGGSGGIEAVATV 358 (416)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHH-HHHHHHHHHHHHGGG-GGGSEEECTHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEEECCCCcCc-CHHHHHHHHHHHccc-CCCCeeeCcchhhcccHHHHHHHHHHHHH
Confidence 34577899999999999999999984 4544421 223344567777741 11232211 222 2234555555555
Q ss_pred HHHHcC
Q 012353 129 NWVESS 134 (465)
Q Consensus 129 ~~l~sg 134 (465)
..|+.+
T Consensus 359 ~~l~~~ 364 (416)
T 1e5m_A 359 MAIAED 364 (416)
T ss_dssp HHHHHT
T ss_pred HHHhcC
Confidence 555554
No 126
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=49.43 E-value=21 Score=39.82 Aligned_cols=75 Identities=7% Similarity=-0.141 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCcee----E-eec-CcChhHHHHHHHH
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEG----V-DST-NACYGGTAALFNC 127 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~----~-di~-~aC~gg~~AL~~A 127 (465)
.....++++++|+++|++++|||.++..... ..+--.+.++||+. ...+.. + +++ .++++-..+|..+
T Consensus 863 ~~~~~~~~~~al~~agl~~~did~~~~Hq~~-----~~i~~~~~~~lgl~-~~k~~~~~~~l~~~GNtssasi~~~L~~~ 936 (979)
T 3tsy_A 863 SENVEKCLTQAFDPLGISDWNSLFWIAHPGG-----PAILDAVEAKLNLD-KKKLEATRHVLSEYGNMSSACVLFILDEM 936 (979)
T ss_dssp HHHHHHHHHHHHGGGTCCCGGGSEEEECCSC-----HHHHHHHHHHHTCC-TTTTHHHHHHHHHHCBCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCcccceEEECCCC-----hHHHHHHHHHcCCC-hHHHHHHHHHHHHcCCcchhhHHHHHHHH
Confidence 3445678888999999999999998764222 23445688899982 122221 2 233 3666666777777
Q ss_pred HHHHHcC
Q 012353 128 VNWVESS 134 (465)
Q Consensus 128 ~~~l~sg 134 (465)
..-++.|
T Consensus 937 ~~~~~~G 943 (979)
T 3tsy_A 937 RKKSLKG 943 (979)
T ss_dssp HHHHHHT
T ss_pred Hhhhccc
Confidence 6655544
No 127
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=49.25 E-value=15 Score=36.65 Aligned_cols=47 Identities=11% Similarity=0.233 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhcc
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LGl 102 (465)
.-...|++++|+++|++|+|||.++ ++|.|+.. .+.-...|.+.|+.
T Consensus 277 ~~~~~a~~~al~~agl~~~dId~ve~HgtgT~~~-d~~e~~al~~~~~~ 324 (413)
T 3o04_A 277 EGAARAMKMAIDDAGLTPDKVDYINAHGTSTPYN-DEYETQAIKTVFGE 324 (413)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHH-HHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCccc-CHHHHHHHHHHhcc
Confidence 3456889999999999999999998 45655522 23444556777775
No 128
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=48.27 E-value=15 Score=36.98 Aligned_cols=47 Identities=17% Similarity=0.268 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEE-EeecCCCCcccHHHHHHHHhcc
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEV-GSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~-~T~s~~~~~ps~a~~l~~~LGl 102 (465)
.-...|++++|+++|++|+|||.|+. +|.|+.- .+.-...|.+.||.
T Consensus 301 ~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~~-D~~E~~al~~~fg~ 348 (437)
T 2gqd_A 301 EGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVG-DLNEVKAIKNTFGE 348 (437)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHH-HHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHcCCCHhhCCEEEEECCCCcCc-CHHHHHHHHHHHhc
Confidence 34577899999999999999999984 4444321 23344456777875
No 129
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=47.76 E-value=14 Score=36.97 Aligned_cols=78 Identities=13% Similarity=0.120 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEE-EeecCCCCcccHHHHHHHHhcccCCCCceeEe----ecC-cChhHHHHHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEV-GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVD----STN-ACYGGTAALFNCV 128 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~-~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~d----i~~-aC~gg~~AL~~A~ 128 (465)
.-...+.+++|+++|++|+|||.|+. +|.|+. ..+.-...|.+.||.. ...+..-. +++ ..++|+..|..+.
T Consensus 283 ~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~-gD~~E~~al~~~f~~~-~~~~~v~s~k~~~GH~~~AaG~~~l~~~~ 360 (424)
T 1tqy_A 283 REMAETIRVALDESRTDATDIDYINAHGSGTRQ-NDRHETAAYKRALGEH-ARRTPVSSIKSMVGHSLGAIGSLEIAACV 360 (424)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHH-HHHHHHHHHHHHTGGG-GGGSCEECTHHHHCBCTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecCccCcC-cCHHHHHHHHHHhccc-CCCCeeeccccccccChhhhHHHHHHHHH
Confidence 34568899999999999999999984 444432 1123344566777641 11222211 222 2344555555555
Q ss_pred HHHHcC
Q 012353 129 NWVESS 134 (465)
Q Consensus 129 ~~l~sg 134 (465)
..|+.+
T Consensus 361 l~l~~~ 366 (424)
T 1tqy_A 361 LALEHG 366 (424)
T ss_dssp HHHHHC
T ss_pred HHHHcC
Confidence 556655
No 130
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=45.00 E-value=49 Score=32.76 Aligned_cols=80 Identities=8% Similarity=-0.004 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHCCCCcCCccE----EEEEeecCCCCcccHHHHHHHHhcccCCCCcee----Ee-ec-CcChhHHHHHH
Q 012353 56 MSLTAVTNLLEKYKIDPKQIGR----LEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEG----VD-ST-NACYGGTAALF 125 (465)
Q Consensus 56 la~~Aa~~aL~~agi~~~~Id~----li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~----~d-i~-~aC~gg~~AL~ 125 (465)
....+.+++|+++|++++ ||. +++.... +.+--.+.+.||+. ..++.. ++ ++ .++++...+|.
T Consensus 291 ~~~~~i~~~L~~agl~~~-id~~di~~v~Hq~~-----~~i~~~~~~~lgl~-~~k~~~s~~~l~~~GNt~sAsi~~~L~ 363 (406)
T 2d3m_A 291 NVEACLIDVFKSVGITPP-EDWNSLFWIPHPGG-----RAILDQVEAKLKLR-PEKFRAARTVLWDYGNMVSASVGYILD 363 (406)
T ss_dssp HHHHHHHHHHHTTTCCCC-SSGGGSEEEECCSC-----HHHHHHHHHHTTCC-TTTTHHHHHHHHHHCBCGGGHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCC-CCccceEEEECCCC-----HHHHHHHHHHcCCC-HHHHHHHHHHHHHcCCchhhHHHHHHH
Confidence 344678899999999988 888 7653322 22234588889972 223322 12 22 34455555555
Q ss_pred HHHHHHHcCCCCC--------CEEEEEE
Q 012353 126 NCVNWVESSSWDG--------RYGLVVC 145 (465)
Q Consensus 126 ~A~~~l~sg~~~~--------~~aLVVa 145 (465)
.+..-=. . +| +++|+++
T Consensus 364 ~~~~~g~-~--~G~~~~g~~~d~vll~~ 388 (406)
T 2d3m_A 364 EMRRKSA-A--KGLETYGEGLEWGVLLG 388 (406)
T ss_dssp HHHHHHH-H--TTCSBTTTTCSEEEEEE
T ss_pred HHHHhcc-c--cCCCccCCCcceEEEEE
Confidence 4432211 1 44 7888877
No 131
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=44.50 E-value=36 Score=28.84 Aligned_cols=60 Identities=10% Similarity=-0.020 Sum_probs=38.0
Q ss_pred CCCHHHHHHHHH----HHHHHHCCCCcCCccEEEEEeecCCC--CcccHHHHHHHHhcccCCCCceeEeecCc
Q 012353 50 VEDVISMSLTAV----TNLLEKYKIDPKQIGRLEVGSETVID--KSKSIKTFLMQIFEKFGNTDIEGVDSTNA 116 (465)
Q Consensus 50 ~Ed~~~la~~Aa----~~aL~~agi~~~~Id~li~~T~s~~~--~~ps~a~~l~~~LGl~g~~~~~~~di~~a 116 (465)
.++..+--.+|+ +.++++++++++||--|+| |.|++- ..|+.+.. .+|. .+++.++.++-
T Consensus 42 e~Nt~e~I~~At~ELl~eii~~N~l~~eDIvSv~F-TvT~DL~A~FPA~aaR---~~Gw---~~VPLmc~qEm 107 (148)
T 1xho_A 42 SDNTADEIVAETQKLLKEMAEKNGLEEDDIISIIF-TVTKDLDAAFPAIAAR---NMGW---TSTALMCMNEI 107 (148)
T ss_dssp SSSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEE-EECTTCCSSCTHHHHH---HTTC---TTSEEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEE-EeCCccCccChHHHHH---HcCC---CccchhhcccC
Confidence 344444444444 4555788999999999887 555542 24554433 5574 78888887653
No 132
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=43.35 E-value=16 Score=36.86 Aligned_cols=47 Identities=13% Similarity=0.299 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEE-EeecCCCCcccHHHHHHHHhcc
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEV-GSETVIDKSKSIKTFLMQIFEK 102 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~-~T~s~~~~~ps~a~~l~~~LGl 102 (465)
.-...|.+++|+++|++|+|||.|.. +|.|+. ..+.-...|.+.||.
T Consensus 301 ~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~-gD~~E~~al~~~fg~ 348 (438)
T 2iwz_A 301 EGALRCMAAALKDAGVQPEEISYINAHATSTPL-GDAAENKAIKHLFKD 348 (438)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHH-HHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEecCCCCcc-cCHHHHHHHHHHHhc
Confidence 44678899999999999999999984 444442 112234456677774
No 133
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=39.72 E-value=64 Score=31.66 Aligned_cols=80 Identities=9% Similarity=0.027 Sum_probs=43.9
Q ss_pred HHHHHHHHHHCCCC-cCCccEEEEEeecCCCCcccHHHHHHHHhcccCCC-Ccee----E-eec-CcChhHHHHHHHHHH
Q 012353 58 LTAVTNLLEKYKID-PKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEG----V-DST-NACYGGTAALFNCVN 129 (465)
Q Consensus 58 ~~Aa~~aL~~agi~-~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~-~~~~----~-di~-~aC~gg~~AL~~A~~ 129 (465)
.++++++|+++|++ .++| .+++... .+.+-..+++.||+ .. ++.. + +++ .++++-..+|..+..
T Consensus 276 ~~~i~~~L~~~gl~d~~di-~~v~Hq~-----~~~i~~~~~~~lgl--~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~ 347 (387)
T 3a5r_A 276 KTCLSDAFTPLNISDWNSL-FWIAHPG-----GPAILDQVTAKVGL--EKEKLKVTRQVLKDYGNMSSATVFFIMDEMRK 347 (387)
T ss_dssp HHHHHHHHGGGTCCCGGGS-EEEECCS-----CHHHHHHHHHHHTC--CGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCChhhe-eEEECCC-----CHHHHHHHHHHcCC--ChHHhHHHHHHHHhcCCcchhHHHHHHHHHHH
Confidence 35778889999997 7788 5544222 22334458888997 33 2221 1 222 355555556655543
Q ss_pred HH-HcC-CCCC---CEEEEEE
Q 012353 130 WV-ESS-SWDG---RYGLVVC 145 (465)
Q Consensus 130 ~l-~sg-~~~~---~~aLVVa 145 (465)
-= +.| ..+| +++|+++
T Consensus 348 ~g~~~G~~~~G~~~d~vll~~ 368 (387)
T 3a5r_A 348 KSLENGQATTGEGLEWGVLFG 368 (387)
T ss_dssp HHHHTTCSBTTTTCSEEEEEE
T ss_pred hccccCCCCCCCCcceEEEEE
Confidence 22 212 0112 7888887
No 134
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=39.43 E-value=30 Score=31.58 Aligned_cols=59 Identities=14% Similarity=0.072 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST 114 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~ 114 (465)
...-..+.+++|+++|++++|||.|.|+.--+.+..--++...++-|.+ ..+++.+-++
T Consensus 35 ~~~l~~~i~~~L~~a~~~~~did~Iav~~GPGsftglRig~~~ak~la~--~~~~Pl~~V~ 93 (231)
T 2gel_A 35 TQRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVRIGIGIAQGLAL--GANLPMIGVS 93 (231)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEEEECCSSCHHHHHHHHHHHHHHHH--TTTCCEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCChhHhHHHHHHHHHHHHH--HcCCCEEEec
Confidence 3446678999999999999999999986543322111223334444443 2344555443
No 135
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=37.52 E-value=39 Score=33.92 Aligned_cols=77 Identities=9% Similarity=0.000 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEE-eecCCCCcccHHHHHHHHhcccCCCCceeE----eecC-cChhHHHHHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVG-SETVIDKSKSIKTFLMQIFEKFGNTDIEGV----DSTN-ACYGGTAALFNCV 128 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~-T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~----di~~-aC~gg~~AL~~A~ 128 (465)
.-...+++++|+++|++|+|||.++.. |.|+. ..+.-...|.+.||- ..+..- .+++ ..++|+..+..+.
T Consensus 302 ~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~-~D~~E~~al~~~fg~---~~~~v~s~k~~~GH~~gAaG~~~~i~~~ 377 (434)
T 2gp6_A 302 ERAGHAITRAIQLAGLAPGDIDHVNAHATGTQV-GDLAEGRAINNALGG---NRPAVYAPKSALGHSVGAVGAVESILTV 377 (434)
T ss_dssp HHHHHHHHHHHHHTTCCTTTEEEEECCCCSCHH-HHHHHHHHHHHHHTT---CCCEECCTHHHHCBCTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcc-chHHHHHHHHHHhcc---CCCCcccchhhhcCchhhhHHHHHHHHH
Confidence 345678999999999999999999854 33321 012223345556652 122211 1222 2344555555555
Q ss_pred HHHHcCC
Q 012353 129 NWVESSS 135 (465)
Q Consensus 129 ~~l~sg~ 135 (465)
..|+.+.
T Consensus 378 ~~l~~~~ 384 (434)
T 2gp6_A 378 LALRDQV 384 (434)
T ss_dssp HHHHHSC
T ss_pred HHHhcCc
Confidence 5566654
No 136
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=36.76 E-value=13 Score=37.32 Aligned_cols=31 Identities=26% Similarity=0.307 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEE-EeecC
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEV-GSETV 85 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~-~T~s~ 85 (465)
.-...|.+++|+++|++++|||.++. +|.|+
T Consensus 285 ~~~~~ai~~al~~agl~~~dId~ve~HgtgT~ 316 (416)
T 2wge_A 285 VRAGRAMTRSLELAGLSPADIDHVNAHGTATP 316 (416)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCCCH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCCCc
Confidence 35677899999999999999999984 45554
No 137
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=36.55 E-value=81 Score=32.02 Aligned_cols=22 Identities=5% Similarity=0.083 Sum_probs=18.2
Q ss_pred HHHHHHH----CCCCcCCccEEEEEe
Q 012353 61 VTNLLEK----YKIDPKQIGRLEVGS 82 (465)
Q Consensus 61 a~~aL~~----agi~~~~Id~li~~T 82 (465)
++++|++ +|+.++|||.+++..
T Consensus 229 ~~~~l~~~~~~~gl~~~did~~v~Hq 254 (460)
T 2v4w_A 229 IQNQWKQAGSDRPFTLDDLQYMIFHT 254 (460)
T ss_dssp HHHHHHHTTCCCCCCGGGCSEEEECC
T ss_pred HHHHHHhhccccCCCHHHhceEeecC
Confidence 5666777 899999999999854
No 138
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=35.50 E-value=27 Score=35.03 Aligned_cols=75 Identities=15% Similarity=0.251 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEE-EeecCCCCcccHHHHHHHHhcccCCCCceeEe----ecC-cChhHHHHHHHHH
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEV-GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVD----STN-ACYGGTAALFNCV 128 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~-~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~d----i~~-aC~gg~~AL~~A~ 128 (465)
.-...|.+++|+++|++|+|||.|+. +|.|+.- .+.-...+.+.+|- .+..-. +++ .+++|+..+-.+.
T Consensus 296 ~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~-D~~E~~al~~~~g~----~~~v~s~k~~~GH~~gAaG~~~~i~~~ 370 (430)
T 1ox0_A 296 QGAIKAIKLALEEAEISPEQVAYVNAHGTSTPAN-EKGESGAIVAVLGK----EVPVSSTKSFTGHLLGAAGAVEAIVTI 370 (430)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHH-HHHHHHHHHHHHCS----SSEEECTHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCHHHcCEEEEeCCcCccc-CHHHHHHHHHHhCC----CceecccccccccchhhHHHHHHHHHH
Confidence 35567899999999999999999984 3444321 22333446666762 222111 122 2344555555555
Q ss_pred HHHHcC
Q 012353 129 NWVESS 134 (465)
Q Consensus 129 ~~l~sg 134 (465)
..|+.+
T Consensus 371 ~~l~~~ 376 (430)
T 1ox0_A 371 EAMRHN 376 (430)
T ss_dssp HHHHHT
T ss_pred HHHhcC
Confidence 556655
No 139
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=33.76 E-value=15 Score=37.03 Aligned_cols=46 Identities=20% Similarity=0.238 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhc
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFE 101 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LG 101 (465)
.-...|++++|+++|++++|||.++ ++|.|+.. .+.....+...++
T Consensus 294 ~~~~~ai~~al~~agl~~~dId~ve~HgtgT~~~-D~~E~~al~~~~~ 340 (431)
T 2ix4_A 294 KGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIG-DAVEARAIKTVFS 340 (431)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHH-HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCccc-CHHHHHHHHHHHc
Confidence 4457789999999999999999998 44555432 2334445666665
No 140
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=32.36 E-value=59 Score=26.68 Aligned_cols=48 Identities=8% Similarity=0.040 Sum_probs=32.0
Q ss_pred HHHHHHHCCCCc-CCccEEEEEeecCCCC--cccHHHHHHHHhcccCCCCceeEeecC
Q 012353 61 VTNLLEKYKIDP-KQIGRLEVGSETVIDK--SKSIKTFLMQIFEKFGNTDIEGVDSTN 115 (465)
Q Consensus 61 a~~aL~~agi~~-~~Id~li~~T~s~~~~--~ps~a~~l~~~LGl~g~~~~~~~di~~ 115 (465)
...+++++++++ +||--|+| |.|++-. .|+.+ ++.+|. .+++-++.+.
T Consensus 27 l~~i~~~N~l~~~~divSv~F-T~T~DL~a~FPA~a---aR~~g~---~~VpL~c~qE 77 (122)
T 1ufy_A 27 LLKMLEANGIQSYEELAAVIF-TVTEDLTSAFPAEA---ARQIGM---HRVPLLSARE 77 (122)
T ss_dssp HHHHHHHHTCCCGGGEEEEEE-EECTTCCSCCHHHH---HHHTTG---GGSCEEEEEC
T ss_pred HHHHHHhcCCCChHhEEEEEE-EeCCccCccChHHH---HHHcCC---Cccchhhccc
Confidence 345567889999 99999887 5555432 34433 345575 6788887765
No 141
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=31.85 E-value=66 Score=35.74 Aligned_cols=80 Identities=13% Similarity=0.161 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhcccCC--CCceeEe----ecC-cChhHHHHHH
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEKFGN--TDIEGVD----STN-ACYGGTAALF 125 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LGl~g~--~~~~~~d----i~~-aC~gg~~AL~ 125 (465)
..-...+.+++|+++|++|+|||.|+ ++|.|+. ..|.-...|.+.+|.... ..+..-. +++ ..++|+..|.
T Consensus 285 ~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~~-gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~li 363 (915)
T 2qo3_A 285 GPAQRRVIRQALESCGLEPGDVDAVEAHGTGTAL-GDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLL 363 (915)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCTT-THHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCcc-CCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHH
Confidence 45567889999999999999999998 4455553 245556667888874100 1121111 122 2345555666
Q ss_pred HHHHHHHcC
Q 012353 126 NCVNWVESS 134 (465)
Q Consensus 126 ~A~~~l~sg 134 (465)
.+.-.|+.+
T Consensus 364 k~~l~L~~~ 372 (915)
T 2qo3_A 364 KVVLALRNG 372 (915)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHhcC
Confidence 666666655
No 142
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=31.50 E-value=65 Score=31.11 Aligned_cols=27 Identities=26% Similarity=0.272 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEE
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVG 81 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~ 81 (465)
+.-..+++.+|+++|++++|||.|.++
T Consensus 54 ~~l~~~i~~~L~~ag~~~~did~Iav~ 80 (334)
T 3eno_A 54 EVIDTVISRALEKAKISIHDIDLIGFS 80 (334)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 455688999999999999999999874
No 143
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=30.60 E-value=50 Score=27.30 Aligned_cols=49 Identities=8% Similarity=0.015 Sum_probs=32.5
Q ss_pred HHHHHHHCCCCcCCccEEEEEeecCCC--CcccHHHHHHHHh-cccCCCCceeEeecCc
Q 012353 61 VTNLLEKYKIDPKQIGRLEVGSETVID--KSKSIKTFLMQIF-EKFGNTDIEGVDSTNA 116 (465)
Q Consensus 61 a~~aL~~agi~~~~Id~li~~T~s~~~--~~ps~a~~l~~~L-Gl~g~~~~~~~di~~a 116 (465)
...++++++++++||--|+| |.|++- ..|+.+. +.+ | ..+++.++.++-
T Consensus 28 l~~i~~~N~l~~~dIvSv~F-T~T~DL~a~FPA~aa---R~~~g---w~~VpL~c~qEm 79 (127)
T 1dbf_A 28 LEKIIEENHTKPEDVVQMLL-SATPDLHAVFPAKAV---RELSG---WQYVPVTCMQEM 79 (127)
T ss_dssp HHHHHHHHCCCGGGEEEEEE-EECTTCCSSCTHHHH---HTSTT---CTTSCEEEEECC
T ss_pred HHHHHHHcCCCHHHEEEEEE-EeCCccCccChHHHH---hccCC---CCccchhhcccC
Confidence 34556788999999999887 555542 2455443 345 6 477888887653
No 144
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=30.30 E-value=47 Score=30.01 Aligned_cols=30 Identities=17% Similarity=0.283 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEeec
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSET 84 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T~s 84 (465)
+.-....+++|+++|++++|||.|.|+.--
T Consensus 37 ~~L~p~i~~~L~~a~~~~~dld~Iav~~GP 66 (213)
T 3r6m_A 37 KKVLPMVDEVLKEAGLTLQDLDALAFGRGP 66 (213)
T ss_dssp HHHHHHHHHHHHTTTCCTTTCSEEEEEEES
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEEecCC
Confidence 344478899999999999999999986543
No 145
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=28.91 E-value=1.4e+02 Score=30.03 Aligned_cols=26 Identities=8% Similarity=-0.020 Sum_probs=20.1
Q ss_pred HHHHHHHHH------HCCCCcCCccEEEEEee
Q 012353 58 LTAVTNLLE------KYKIDPKQIGRLEVGSE 83 (465)
Q Consensus 58 ~~Aa~~aL~------~agi~~~~Id~li~~T~ 83 (465)
.++.+.+|+ ++|++++|||.+++...
T Consensus 217 ~~~~~~~l~~~~~~~~agl~~~did~~v~Hq~ 248 (450)
T 2f82_A 217 DSCYKHLCNKFEKLEGKEFSINDADYFVFHSP 248 (450)
T ss_dssp HHHHHHHHHHHHHHHSSCCCGGGCSEEEECCS
T ss_pred HHHHHHHHHHhhhccccCCChhhcCEEEecCC
Confidence 356677775 88999999999987543
No 146
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=24.68 E-value=1.7e+02 Score=28.46 Aligned_cols=83 Identities=13% Similarity=0.095 Sum_probs=46.9
Q ss_pred CHHHHHH----HHHHHHHHHCCCC-cCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCC-cee----E-eec-CcChh
Q 012353 52 DVISMSL----TAVTNLLEKYKID-PKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTD-IEG----V-DST-NACYG 119 (465)
Q Consensus 52 d~~~la~----~Aa~~aL~~agi~-~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~-~~~----~-di~-~aC~g 119 (465)
++...+. .+++++|+++|++ .++| .+++.. . .+.+-..+++.||+ ... +.. + +++ .++++
T Consensus 270 ~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq-~----~~~i~~~~~~~lgl--~~ek~~~~~~~l~~~GNtssAs 341 (389)
T 1i88_A 270 DVPGIVSKNITKALVEAFEPLGISDYNSI-FWIAHP-G----GPAILDQVEQKLAL--KPEKMNATREVLSEYGNMSSAC 341 (389)
T ss_dssp CHHHHHHHHHHHHHHHHHGGGTCCCTTSS-EEEECC-S----CHHHHHHHHHHHTC--CGGGGHHHHHHHHHHCBCGGGH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchhhc-eEEECC-C----cHHHHHHHHHHcCC--CHHHHHHHHHHHHHhCCchhhH
Confidence 4555544 5677888999997 7777 555422 1 22334458889998 332 222 1 222 35555
Q ss_pred HHHHHHHHHHHHHcCCCCC--------CEEEEEE
Q 012353 120 GTAALFNCVNWVESSSWDG--------RYGLVVC 145 (465)
Q Consensus 120 g~~AL~~A~~~l~sg~~~~--------~~aLVVa 145 (465)
-..+|..+..-=. . +| +++|+++
T Consensus 342 i~~~L~~~~~~g~-~--~G~~~~g~~~d~vll~~ 372 (389)
T 1i88_A 342 VLFILDEMRKKST-Q--NGLKTTGEGLEWGVLFG 372 (389)
T ss_dssp HHHHHHHHHHHHH-H--TTCSBTTTTCSEEEEEE
T ss_pred HHHHHHHHHHhcc-c--cCCcccCCCCceEEEEE
Confidence 5556655543221 1 44 7888877
No 147
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=24.52 E-value=54 Score=29.71 Aligned_cols=59 Identities=14% Similarity=0.054 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCceeEeec
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST 114 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di~ 114 (465)
.+......+++|+++|++++|||.|.|+.--+.+..=-++...++-|.+ .-+++.+-++
T Consensus 46 se~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTGlRiG~~~Ak~La~--~~~iPl~gVs 104 (218)
T 2a6a_A 46 AEILPVVVKKLLDELDLKVKDLDVVGVGIGPGGLTGLRVGIATVVGLVS--PYDIPVAPLN 104 (218)
T ss_dssp GGHHHHHHHHHHHHHTCCGGGCSEEEEECCSSCHHHHHHHHHHHHHHHG--GGTCCEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCchHhHHHHHHHHHHHHH--HcCCCEEEeC
Confidence 3444567889999999999999999986543322111133334444443 2345555553
No 148
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=24.48 E-value=61 Score=31.14 Aligned_cols=28 Identities=7% Similarity=0.116 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHCCCCcCCccEEEEEe
Q 012353 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (465)
Q Consensus 55 ~la~~Aa~~aL~~agi~~~~Id~li~~T 82 (465)
+....+.+++|+++|++++|||.|.+++
T Consensus 49 ~~l~~~i~~~L~~agi~~~did~Ia~~~ 76 (330)
T 2ivn_A 49 RLMKPLLRKALSEAGVSLDDIDVIAFSQ 76 (330)
T ss_dssp HHHHHHHHHHHHHHTCCTTTCCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEEC
Confidence 4456789999999999999999998754
No 149
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=23.75 E-value=2.3e+02 Score=28.13 Aligned_cols=81 Identities=9% Similarity=0.019 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHH------HCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhc--ccCCCCc----eeEeecCcChhHH
Q 012353 54 ISMSLTAVTNLLE------KYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFE--KFGNTDI----EGVDSTNACYGGT 121 (465)
Q Consensus 54 ~~la~~Aa~~aL~------~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LG--l~g~~~~----~~~di~~aC~gg~ 121 (465)
+.-...+++++|+ ++|++ ||.+++..-. +.+-..+++.|| +. .... ..++ -..+++.+
T Consensus 306 v~~~~~~i~~~L~~~~~~~~~gl~---id~~v~Hq~~-----~~il~~v~~~Lg~~l~-~ek~~~s~~~l~-~GNtssAs 375 (413)
T 3v7i_A 306 VQETVTAMWEWLRVRYEDDPSSWH---PDVLLAHPGG-----TRVLEYMEQTMPDEWP-SGLLSYSRDSYT-SGNRGGAA 375 (413)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTCC---CCEEEEECSS-----HHHHHHHHHHSCSSCC-SCSTHHHHHHHT-TCBCGGGH
T ss_pred HHHHHHHHHHHHhhccccccCCCc---eeEEEECCCC-----hHHHHHHHHHhCCCCC-HHHhhccceEec-eeChHHHH
Confidence 3335567888999 88886 9998764322 345567889999 82 2222 2444 33444443
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEEE
Q 012353 122 AALFNCVNWVESSSWDGRYGLVVC 145 (465)
Q Consensus 122 ~AL~~A~~~l~sg~~~~~~aLVVa 145 (465)
.-+.+...+ +....+|+++|+++
T Consensus 376 i~~~L~~~~-~~~~~~Gd~vll~~ 398 (413)
T 3v7i_A 376 VFDILRRAH-DAGQKTGSRAVLYA 398 (413)
T ss_dssp HHHHHHHHH-HHCCCTTCEEEEEE
T ss_pred HHHHHHHHH-hCCCCCCCEEEEEE
Confidence 333333333 43333788988887
No 150
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=22.49 E-value=1.5e+02 Score=29.10 Aligned_cols=87 Identities=13% Similarity=0.038 Sum_probs=47.1
Q ss_pred CHHHHHH----HHHHHHHHHCCCC-cCCccEEEEEeecCCCCcccHHHHHHHHhcccCCCCcee----E-eec-CcChhH
Q 012353 52 DVISMSL----TAVTNLLEKYKID-PKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEG----V-DST-NACYGG 120 (465)
Q Consensus 52 d~~~la~----~Aa~~aL~~agi~-~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~----~-di~-~aC~gg 120 (465)
++...+. ++++++|+++|++ .++| .+++... .+.+-..+++.||+. ...+.. + +++ .++++-
T Consensus 275 ~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~-----~~~i~~~~~~~lgl~-~ek~~~s~~~l~~~GNtssAsi 347 (402)
T 1ee0_A 275 DVPLMVAKNIENAAEKALSPLGITDWNSV-FWMVHPG-----GRAILDQVERKLNLK-EDKLRASRHVLSEYGNLISACV 347 (402)
T ss_dssp THHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCS-----SHHHHHHHHHHTTCC-TTTTHHHHHHHHHHCBCGGGHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCCccccc-eEEECCC-----CHHHHHHHHHHcCCC-hHHhHHHHHHHHhcCCchhhHH
Confidence 4444444 5778888999997 7778 5554222 223444588899972 123322 1 222 355555
Q ss_pred HHHHHHHHHHH-HcC-CCCC---CEEEEEE
Q 012353 121 TAALFNCVNWV-ESS-SWDG---RYGLVVC 145 (465)
Q Consensus 121 ~~AL~~A~~~l-~sg-~~~~---~~aLVVa 145 (465)
..+|..+..-= +.| ..+| +++|+++
T Consensus 348 ~~~L~~~~~~g~~~G~~~~G~~~d~vll~~ 377 (402)
T 1ee0_A 348 LFIIDEVRKRSMAEGKSTTGEGLDCGVLFG 377 (402)
T ss_dssp HHHHHHHHHHHHHTTCSBTBTTBSEEEEEE
T ss_pred HHHHHHHHHhccccCCCCCCCCcceEEEEE
Confidence 55665554322 212 0122 7888877
No 151
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=22.30 E-value=1.6e+02 Score=29.92 Aligned_cols=42 Identities=5% Similarity=-0.014 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHH--------HCCCCcCCccEEEEEeecCCCCcccHHHHHHHHhc
Q 012353 55 SMSLTAVTNLLE--------KYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFE 101 (465)
Q Consensus 55 ~la~~Aa~~aL~--------~agi~~~~Id~li~~T~s~~~~~ps~a~~l~~~LG 101 (465)
.-+.+..++.|+ ++|+.++|||.+++..-.. .+-..++++|+
T Consensus 238 ~~~~~~~~~~l~~~~~~~~~~~g~~~~did~~v~H~~~~-----ki~~~~~~~L~ 287 (478)
T 2p8u_A 238 DRCYSVYCKKIHAQWQKEGNDKDFTLNDFGFMIFHSPYC-----KLVQKSLARML 287 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCCGGGCSEEEECCSSH-----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccccccccCCChHHcCEEEecCCcH-----HHHHHHHHHhC
Confidence 344456677776 6799999999999855322 22334555665
No 152
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=21.92 E-value=2e+02 Score=28.33 Aligned_cols=79 Identities=8% Similarity=-0.025 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHCCCC-cCCccEEEEEeecCCCCcccHHHHHHHHhcccCCC-Ccee----E-eec-CcChhHHHHHHHH
Q 012353 56 MSLTAVTNLLEKYKID-PKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEG----V-DST-NACYGGTAALFNC 127 (465)
Q Consensus 56 la~~Aa~~aL~~agi~-~~~Id~li~~T~s~~~~~ps~a~~l~~~LGl~g~~-~~~~----~-di~-~aC~gg~~AL~~A 127 (465)
...++++++|+++|++ .++| .+++... .+.+-..+++.||+ .. .+.. + +++ .++++-..+|..+
T Consensus 296 ~~~~~i~~~L~~~gl~d~~di-~~v~Hq~-----~~~i~~~~~~~Lgl--~~ek~~~s~~~l~~~GNtssAsi~~~L~~~ 367 (413)
T 2p0u_A 296 NIGGFLKDTKNLVGASSWNEL-FWAVHPG-----GPAILDQVEAKLEL--EKGKFQASRDILSDYGNMSSASVLFVLDRV 367 (413)
T ss_dssp HHHHHHHHHHHHTTCCSGGGS-EEEECCS-----SHHHHHHHHHHTTC--CGGGGHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCccce-EEEECCC-----CHHHHHHHHHHhCC--CHHHHHHHHHHHHHcCcchhhHHHHHHHHH
Confidence 3345777889999997 6777 5554221 22334458889997 33 2221 1 222 3555555566555
Q ss_pred HHHHHcCCCCC--------CEEEEEE
Q 012353 128 VNWVESSSWDG--------RYGLVVC 145 (465)
Q Consensus 128 ~~~l~sg~~~~--------~~aLVVa 145 (465)
..--. . +| +++|+++
T Consensus 368 ~~~g~-~--~G~~~~g~~~d~vll~~ 390 (413)
T 2p0u_A 368 RERSL-E--SNKSTFGEGSEWGFLIG 390 (413)
T ss_dssp HHHHH-H--TTCSBTTTTCSEEEEEE
T ss_pred HHhcc-c--cCCcccCCCcceEEEEE
Confidence 43221 1 44 7888877
No 153
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=21.37 E-value=95 Score=27.03 Aligned_cols=91 Identities=9% Similarity=0.067 Sum_probs=56.3
Q ss_pred CCHHHHHHHHHHHHHHHCCCCcCCccEEEEEeecCCCCccc-HHHHHHHHhcccCCCCceeEeecCcChhHHHHHHHHHH
Q 012353 51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKS-IKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (465)
Q Consensus 51 Ed~~~la~~Aa~~aL~~agi~~~~Id~li~~T~s~~~~~ps-~a~~l~~~LGl~g~~~~~~~di~~aC~gg~~AL~~A~~ 129 (465)
.+-.+.+..++..+++.. ..+.|+.+.+++.......+. ....+...+.-. . ......+......||..|..
T Consensus 31 ~~r~~~ak~~~~~~~~~~--~~~~v~lv~F~~~~~~~~~~~~~~~~~~~~l~~l--~---~~~~~~g~T~l~~al~~a~~ 103 (218)
T 3ibs_A 31 PSRLEKAKRLISRLVDEL--DNDKVGMIVFAGDAFTQLPITSDYISAKMFLESI--S---PSLISKQGTAIGEAINLATR 103 (218)
T ss_dssp SCHHHHHHHHHHHHHHTC--SSCEEEEEEESSSEEEEEEEESCHHHHHHHHHTC--C---GGGCCSCSCCHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHhC--CCCeEEEEEECCCceEeCCCCCCHHHHHHHHHhc--C---cccCCCCCCcHHHHHHHHHH
Confidence 457788999999999874 456788888765432211111 233455555421 1 11112455667789999998
Q ss_pred HHHcCCCCCCEEEEEEeccc
Q 012353 130 WVESSSWDGRYGLVVCTDSA 149 (465)
Q Consensus 130 ~l~sg~~~~~~aLVVasD~~ 149 (465)
.+.... ...+++|+-+|-.
T Consensus 104 ~l~~~~-~~~~~ivllTDG~ 122 (218)
T 3ibs_A 104 SFTPQE-GVGRAIIVITDGE 122 (218)
T ss_dssp TSCSCS-SCCEEEEEEECCT
T ss_pred HHhhCC-CCCcEEEEEcCCC
Confidence 887653 2478888888865
No 154
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=20.86 E-value=46 Score=34.88 Aligned_cols=27 Identities=11% Similarity=0.151 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHCCCCcCCccEEEEEe
Q 012353 56 MSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (465)
Q Consensus 56 la~~Aa~~aL~~agi~~~~Id~li~~T 82 (465)
+=..|++.||+.+|++++|||.|.+..
T Consensus 51 fP~~AI~~cL~~AGi~~~DID~Va~~~ 77 (576)
T 3ven_A 51 APVQAAAFCLAQAGLTVDDLDAVAFGW 77 (576)
T ss_dssp CCHHHHHHHHHHHTCCGGGCSEEEESS
T ss_pred CCHHHHHHHHHHcCCCHHHCcEEEEEC
Confidence 345678899999999999999999743
No 155
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=20.66 E-value=65 Score=40.07 Aligned_cols=81 Identities=14% Similarity=0.089 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHCCCCcCCccEEE-EEeecCCCCcccHHHHHHHHhcccCCCCceeEee----cC-cChhHHHHHHHH
Q 012353 54 ISMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS----TN-ACYGGTAALFNC 127 (465)
Q Consensus 54 ~~la~~Aa~~aL~~agi~~~~Id~li-~~T~s~~~~~ps~a~~l~~~LGl~g~~~~~~~di----~~-aC~gg~~AL~~A 127 (465)
..-..++.+++|+++|++|++||.|. +||.|+.- -|.-+..|.+.||-.....+..-.+ ++ -+++|+.+|.-+
T Consensus 266 ~~~q~~~i~~al~~ag~~p~~i~yveaHGTgT~~g-D~~E~~al~~~f~~~~~~~~~igS~Ks~iGH~~~AaG~~~~ik~ 344 (2512)
T 2vz8_A 266 GDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKVG-DPQELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKV 344 (2512)
T ss_dssp HHHHHHHHHTTSGGGSSCTTSCCEEECCCCCCTTH-HHHHHHHHHHHHCSCSSSCCEEECHHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEeecCCCCCC-CHHHHHHHHHHhcccCCCCceeecccccccccccccchhHHHHH
Confidence 44567788999999999999999998 66766542 4556677888887311112222222 22 345566666666
Q ss_pred HHHHHcCC
Q 012353 128 VNWVESSS 135 (465)
Q Consensus 128 ~~~l~sg~ 135 (465)
.-.|+.+.
T Consensus 345 ~l~l~~~~ 352 (2512)
T 2vz8_A 345 LLSLEHGV 352 (2512)
T ss_dssp HHHHTTTB
T ss_pred HHHHHCCC
Confidence 66666553
No 156
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=20.42 E-value=2.8e+02 Score=26.85 Aligned_cols=28 Identities=7% Similarity=-0.088 Sum_probs=18.0
Q ss_pred CCCCCCCCceeeccCC----chHHHHHHHHHh
Q 012353 234 KQFSLSNADYFVFHSP----YNKLVQKSFARL 261 (465)
Q Consensus 234 ~~~~~~did~~~~H~p----~~km~~~~~~~L 261 (465)
+|+.++|||.+++-+. .+.+...+..+|
T Consensus 96 ag~~~~dId~li~~t~t~~~~p~~a~~v~~~L 127 (379)
T 3euo_A 96 ARLVPAQITHMVSTTCTDSANPGYDHYVAKEL 127 (379)
T ss_dssp HTCCGGGCCEEEEECSSCCCSSCHHHHHHHHH
T ss_pred cCCCHHHCCEEEEEecCCCCCCCHHHHHHHHc
Confidence 4899999999987542 233344455555
Done!