Your job contains 1 sequence.
>012354
MTCFIANAKFSSLPLSISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYP
AKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEE
LLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVL
AAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVD
NGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAP
SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPT
ISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYH
TIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSSK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012354
(465 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2197848 - symbol:HCAR "7-hydroxymethyl chlorop... 2035 1.7e-210 1
TIGR_CMR|DET_0214 - symbol:DET_0214 "iron-sulfur cluster-... 131 1.9e-05 1
UNIPROTKB|Q3ACD9 - symbol:CHY_1362 "Coenzyme F420 hydroge... 117 0.00059 1
TIGR_CMR|CHY_1362 - symbol:CHY_1362 "coenzyme F420 hydrog... 117 0.00059 1
>TAIR|locus:2197848 [details] [associations]
symbol:HCAR "7-hydroxymethyl chlorophyll a (HMChl)
reductase" species:3702 "Arabidopsis thaliana" [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0050454 "coenzyme F420
hydrogenase activity" evidence=ISS] [GO:0015994 "chlorophyll
metabolic process" evidence=IDA] [GO:0033354 "chlorophyll cycle"
evidence=IDA] [GO:0090415 "7-hydroxymethyl chlorophyll a reductase
activity" evidence=IDA] Pfam:PF04422 Pfam:PF04432 EMBL:CP002684
GO:GO:0009507 GO:GO:0046872 GO:GO:0051536 EMBL:AC002376
EMBL:AK117982 EMBL:BT002029 EMBL:BT006603 IPI:IPI00538009
PIR:H86178 RefSeq:NP_171956.2 UniGene:At.42441 STRING:Q8GS60
PRIDE:Q8GS60 EnsemblPlants:AT1G04620.1 GeneID:839472
KEGG:ath:AT1G04620 TAIR:At1g04620 eggNOG:COG1035
HOGENOM:HOG000148137 InParanoid:Q8GS60 KO:K00441 OMA:YVLGTPC
PhylomeDB:Q8GS60 ProtClustDB:CLSN2690690
BioCyc:MetaCyc:AT1G04620-MONOMER Genevestigator:Q8GS60
GO:GO:0090415 GO:GO:0033354 InterPro:IPR007516 InterPro:IPR007525
Uniprot:Q8GS60
Length = 462
Score = 2035 (721.4 bits), Expect = 1.7e-210, P = 1.7e-210
Identities = 377/426 (88%), Positives = 404/426 (94%)
Query: 40 VKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETV 99
VKLREDWR++S+PIPPGGTYPAKDHCS+CGLCDTYYIAHVK+ACAFLGDGMSRIE LE V
Sbjct: 37 VKLREDWREKSRPIPPGGTYPAKDHCSQCGLCDTYYIAHVKEACAFLGDGMSRIESLEPV 96
Query: 100 VHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQ 159
VHGRGR+ DSL DTY GVH+E LYARK KPVEGAQWTGIVTTIAIEMLK+ MVEAVVCVQ
Sbjct: 97 VHGRGRKADSLQDTYFGVHQEQLYARKLKPVEGAQWTGIVTTIAIEMLKSNMVEAVVCVQ 156
Query: 160 SDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQAL 219
SDP+DRLSPRPVLARTPEEVLAA+GVKPTLSPNLNTL L+EA+GVKRLLFCGVGCQVQAL
Sbjct: 157 SDPEDRLSPRPVLARTPEEVLAARGVKPTLSPNLNTLELIEASGVKRLLFCGVGCQVQAL 216
Query: 220 RSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDG 279
RSVE HLNLEKLYVLGTNCVDNGTR+GLDKFLKAAS EPETVLHYEFMQDYKV LKHLDG
Sbjct: 217 RSVEQHLNLEKLYVLGTNCVDNGTRDGLDKFLKAASKEPETVLHYEFMQDYKVQLKHLDG 276
Query: 280 HIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITV 339
HIEEVPYF LPANDLVDVIAPSCYSCFDYTNALADLV+GYMGVPKY+G++MT HPQYITV
Sbjct: 277 HIEEVPYFSLPANDLVDVIAPSCYSCFDYTNALADLVIGYMGVPKYSGLNMTDHPQYITV 336
Query: 340 RNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIA 399
RNERGKEMLSLV+NLLEITPTISSGDRRPFV ETVKADD AK G+GP+QPAP FVGN+IA
Sbjct: 337 RNERGKEMLSLVENLLEITPTISSGDRRPFVTETVKADDAAKFGQGPAQPAPLFVGNIIA 396
Query: 400 FFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQID 459
F +NLVGPKGLEFARYSLDYHTIRNYL+VNR WGK+RA+ HMPSYAKKIVEMYN+NGQID
Sbjct: 397 FILNLVGPKGLEFARYSLDYHTIRNYLYVNRKWGKQRANTHMPSYAKKIVEMYNKNGQID 456
Query: 460 QMLSSK 465
+MLS K
Sbjct: 457 KMLSKK 462
>TIGR_CMR|DET_0214 [details] [associations]
symbol:DET_0214 "iron-sulfur cluster-binding
protein/coenzyme F420-reducing hydrogenase, beta subunit, putative"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0009055
"electron carrier activity" evidence=ISS] [GO:0050454 "coenzyme
F420 hydrogenase activity" evidence=ISS] InterPro:IPR001450
InterPro:IPR017896 Pfam:PF12838 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 Pfam:PF04422 Pfam:PF04432 GO:GO:0009055
GO:GO:0051536 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG1035 KO:K00441 InterPro:IPR007516 InterPro:IPR007525
RefSeq:YP_180962.1 ProteinModelPortal:Q3Z9Y7 STRING:Q3Z9Y7
GeneID:3230468 KEGG:det:DET0214 PATRIC:21607505
HOGENOM:HOG000275506 OMA:GYEIFNE ProtClustDB:CLSK797888
BioCyc:DETH243164:GJNF-214-MONOMER Uniprot:Q3Z9Y7
Length = 428
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 50/190 (26%), Positives = 80/190 (42%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 196
GI TT+ L+TG+++ + + P L+P +ART EE+ A G K P
Sbjct: 109 GIATTLLAYALETGLIDGALVSIAPPFSPLTPTGFIARTAEELKQAAGSK--YCPVAANT 166
Query: 197 ALVE-AAGVKRLLFCGVGCQVQALRSVEHHLNL--EKLYV-LGTNCVDNGTREGLDKFLK 252
A+ E AA R G+ C +QA+R E + E++ + LG C + +G + LK
Sbjct: 167 AISEIAARPGRYAVAGLPCHIQAIRKAERQNPVLQERIVLHLGIVCSSTMSFKGTEYILK 226
Query: 253 AASSEPETVLHYEFMQDY---KVHLKHLDGHIEEVPYFCLPANDLVDVIAPS-CYSCFDY 308
++V + + + L+ G +P P C C D
Sbjct: 227 KQGINKDSVTSLSYRTNGWPGNMRLETCGGTTLRLPLKAYHPYHGHGFFTPRRCLICNDQ 286
Query: 309 TNALADLVVG 318
N LAD+ +G
Sbjct: 287 LNELADISLG 296
>UNIPROTKB|Q3ACD9 [details] [associations]
symbol:CHY_1362 "Coenzyme F420 hydrogenase, beta subunit"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008152 "metabolic process" evidence=ISS] [GO:0016491
"oxidoreductase activity" evidence=ISS] [GO:0055114
"oxidation-reduction process" evidence=ISS] InterPro:IPR001450
InterPro:IPR017896 Pfam:PF00037 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 Pfam:PF04422 Pfam:PF04432 GO:GO:0009055
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0016491 GO:GO:0051536
eggNOG:COG1035 KO:K00441 InterPro:IPR007516 InterPro:IPR007525
RefSeq:YP_360195.1 ProteinModelPortal:Q3ACD9 STRING:Q3ACD9
GeneID:3727015 KEGG:chy:CHY_1362 PATRIC:21275857
HOGENOM:HOG000273756 OMA:WHENGAI ProtClustDB:CLSK841834
BioCyc:CHYD246194:GJCN-1361-MONOMER Uniprot:Q3ACD9
Length = 400
Score = 117 (46.2 bits), Expect = 0.00059, P = 0.00059
Identities = 80/316 (25%), Positives = 137/316 (43%)
Query: 62 KDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLD-DTYLGVHEE 120
+D CS CG+C + I C G + +E E G R D Y G +
Sbjct: 47 RDKCSECGIC--FRI------CP--GSDVPLLE-FEKHFFGSNRNPTLTDLGFYRGSY-- 93
Query: 121 LLYA-RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEV 179
+ YA + ++GA G+VT + + L+ G+++ + + + LA++ +E+
Sbjct: 94 VGYAGEEIIRIKGASG-GVVTALLVYALEKGIIDCAIVAGFNKEKPWLTEAKLAKSKKEI 152
Query: 180 LAAKGVKPTLSPNLNTLALVEA--AGVKRLLFCGVGCQVQALRSVEHH-LNLE---KLYV 233
+ A K + P +N L EA AG +R+ G+ C + A+R ++++ + + K+ +
Sbjct: 153 IDAAQSKYAVVP-VNML-FREAVKAGCQRVGIVGLPCHIHAVRKMQYYDIPRDIAGKIKL 210
Query: 234 -LGTNCVDN----GTREGLDKFLKAASSEPETVLHY---EFMQDYKVHLKHLDGHI---- 281
+G C GTR L ++ E L Y E+ + V L H D I
Sbjct: 211 AIGLFCASQFYFEGTRHILVEWCGVDDMEEIANLEYRGGEWPGHFVVKL-HSDKTITIDR 269
Query: 282 EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVG-YMGVPKYTGISMTQHPQYITVR 340
Y L N D C C D+++ LAD+ VG Y P G + + + VR
Sbjct: 270 HRYVYHMLMPNYKRD----RCEMCIDWSSELADIAVGDYWASPTI-GDNFSG-TSALLVR 323
Query: 341 NERGKEMLSLVKNLLE 356
+ G+E L+K+ +E
Sbjct: 324 SLPGEE---LIKSAVE 336
>TIGR_CMR|CHY_1362 [details] [associations]
symbol:CHY_1362 "coenzyme F420 hydrogenase beta subunit
family protein" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0008152 "metabolic process" evidence=ISS] [GO:0016491
"oxidoreductase activity" evidence=ISS] InterPro:IPR001450
InterPro:IPR017896 Pfam:PF00037 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 Pfam:PF04422 Pfam:PF04432 GO:GO:0009055
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0016491 GO:GO:0051536
eggNOG:COG1035 KO:K00441 InterPro:IPR007516 InterPro:IPR007525
RefSeq:YP_360195.1 ProteinModelPortal:Q3ACD9 STRING:Q3ACD9
GeneID:3727015 KEGG:chy:CHY_1362 PATRIC:21275857
HOGENOM:HOG000273756 OMA:WHENGAI ProtClustDB:CLSK841834
BioCyc:CHYD246194:GJCN-1361-MONOMER Uniprot:Q3ACD9
Length = 400
Score = 117 (46.2 bits), Expect = 0.00059, P = 0.00059
Identities = 80/316 (25%), Positives = 137/316 (43%)
Query: 62 KDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLD-DTYLGVHEE 120
+D CS CG+C + I C G + +E E G R D Y G +
Sbjct: 47 RDKCSECGIC--FRI------CP--GSDVPLLE-FEKHFFGSNRNPTLTDLGFYRGSY-- 93
Query: 121 LLYA-RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEV 179
+ YA + ++GA G+VT + + L+ G+++ + + + LA++ +E+
Sbjct: 94 VGYAGEEIIRIKGASG-GVVTALLVYALEKGIIDCAIVAGFNKEKPWLTEAKLAKSKKEI 152
Query: 180 LAAKGVKPTLSPNLNTLALVEA--AGVKRLLFCGVGCQVQALRSVEHH-LNLE---KLYV 233
+ A K + P +N L EA AG +R+ G+ C + A+R ++++ + + K+ +
Sbjct: 153 IDAAQSKYAVVP-VNML-FREAVKAGCQRVGIVGLPCHIHAVRKMQYYDIPRDIAGKIKL 210
Query: 234 -LGTNCVDN----GTREGLDKFLKAASSEPETVLHY---EFMQDYKVHLKHLDGHI---- 281
+G C GTR L ++ E L Y E+ + V L H D I
Sbjct: 211 AIGLFCASQFYFEGTRHILVEWCGVDDMEEIANLEYRGGEWPGHFVVKL-HSDKTITIDR 269
Query: 282 EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVG-YMGVPKYTGISMTQHPQYITVR 340
Y L N D C C D+++ LAD+ VG Y P G + + + VR
Sbjct: 270 HRYVYHMLMPNYKRD----RCEMCIDWSSELADIAVGDYWASPTI-GDNFSG-TSALLVR 323
Query: 341 NERGKEMLSLVKNLLE 356
+ G+E L+K+ +E
Sbjct: 324 SLPGEE---LIKSAVE 336
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 465 436 0.00088 118 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 621 (66 KB)
Total size of DFA: 283 KB (2149 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.54u 0.12s 36.66t Elapsed: 00:00:02
Total cpu time: 36.54u 0.12s 36.66t Elapsed: 00:00:02
Start: Fri May 10 07:18:24 2013 End: Fri May 10 07:18:26 2013