BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012354
(465 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255554300|ref|XP_002518190.1| Coenzyme F420 hydrogenase subunit beta, putative [Ricinus communis]
gi|223542786|gb|EEF44323.1| Coenzyme F420 hydrogenase subunit beta, putative [Ricinus communis]
Length = 458
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/451 (86%), Positives = 421/451 (93%)
Query: 15 LSISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTY 74
LS+ T SS SSS + S +KSVKLREDWR+RS+PIPPGGTYPAKDHCSRCGLCDTY
Sbjct: 8 LSLPTFISSSYSSSKDTNSNSSNKSVKLREDWRQRSRPIPPGGTYPAKDHCSRCGLCDTY 67
Query: 75 YIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQ 134
YI+HV++ACAFLGDGMSRIEGLE VVHGRGR+ DS D+ YLGVHEELLYARKTKPVEGAQ
Sbjct: 68 YISHVRNACAFLGDGMSRIEGLEAVVHGRGRKIDSSDEMYLGVHEELLYARKTKPVEGAQ 127
Query: 135 WTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLN 194
WTGIVTTIAIEMLK MV+AV+CVQSDP+DRLSPRPVLARTP+EVLAAKGVKPTLSPNLN
Sbjct: 128 WTGIVTTIAIEMLKADMVDAVICVQSDPEDRLSPRPVLARTPQEVLAAKGVKPTLSPNLN 187
Query: 195 TLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAA 254
TLALVEA+GVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAA
Sbjct: 188 TLALVEASGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAA 247
Query: 255 SSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALAD 314
S EPETVLHYEFMQDYKVHLKHLDG IEEVPYFCLPA DLVDVIAPSCYSCFDYTNALAD
Sbjct: 248 SDEPETVLHYEFMQDYKVHLKHLDGRIEEVPYFCLPATDLVDVIAPSCYSCFDYTNALAD 307
Query: 315 LVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETV 374
LVVGYMGVPKY G+SMTQHPQY+TVRN+RG+EML LV+ LLEITPTISSGDRRPFVMETV
Sbjct: 308 LVVGYMGVPKYAGVSMTQHPQYVTVRNDRGREMLDLVRGLLEITPTISSGDRRPFVMETV 367
Query: 375 KADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGK 434
KADDNAK+G+GPSQ APKFVGN +AF +NL+GPKGLEFARYSLDYHTIRNYL+ NRAWGK
Sbjct: 368 KADDNAKLGKGPSQSAPKFVGNFLAFILNLIGPKGLEFARYSLDYHTIRNYLYTNRAWGK 427
Query: 435 KRADKHMPSYAKKIVEMYNQNGQIDQMLSSK 465
RA++H PSYAKKIVEMYNQNGQIDQML +K
Sbjct: 428 ARAERHTPSYAKKIVEMYNQNGQIDQMLQNK 458
>gi|225433343|ref|XP_002285592.1| PREDICTED: uncharacterized protein all1601 [Vitis vinifera]
gi|297741879|emb|CBI33314.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/428 (89%), Positives = 416/428 (97%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
KSVKLR+DWR+RS+PIPPGGTYPAKDHCSRCGLCDTYYIAHVK+ACAFLGDGMS+IE LE
Sbjct: 30 KSVKLRDDWRQRSRPIPPGGTYPAKDHCSRCGLCDTYYIAHVKNACAFLGDGMSKIESLE 89
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
+VHGRGR+ SLD+TYLGV+E+LLYARKT+PVEGAQWTGIVTTIAIEMLK GMVEAV+C
Sbjct: 90 PLVHGRGRKAYSLDETYLGVYEQLLYARKTEPVEGAQWTGIVTTIAIEMLKAGMVEAVIC 149
Query: 158 VQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 217
VQSDP+DRLSPRPVLARTP+EVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ
Sbjct: 150 VQSDPEDRLSPRPVLARTPDEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 209
Query: 218 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 277
ALRSVE HLNL+KLYVLGTNCVDNGTREGLDKFL AASSEPETVLHYEFMQDYKVHLKHL
Sbjct: 210 ALRSVEQHLNLDKLYVLGTNCVDNGTREGLDKFLNAASSEPETVLHYEFMQDYKVHLKHL 269
Query: 278 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 337
DGHIEEVPYFCLPAN+LVDVIAPSCYSCFDYTNALADLVVGYMGVPKY G+SMTQHPQY+
Sbjct: 270 DGHIEEVPYFCLPANELVDVIAPSCYSCFDYTNALADLVVGYMGVPKYPGVSMTQHPQYV 329
Query: 338 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 397
TVRNERG+EMLSLV+NLLEI PT SSGDRRPFVMETVKADDNAK+G+GPSQPAPKFVGNL
Sbjct: 330 TVRNERGREMLSLVENLLEIIPTTSSGDRRPFVMETVKADDNAKLGKGPSQPAPKFVGNL 389
Query: 398 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 457
IAF +NL+GPKGLEFARYSLDYHTIRNY++VNR WGK+RAD+HMPSYAKK+V++YNQNG+
Sbjct: 390 IAFILNLIGPKGLEFARYSLDYHTIRNYIYVNRMWGKQRADRHMPSYAKKLVDLYNQNGE 449
Query: 458 IDQMLSSK 465
ID+MLS+K
Sbjct: 450 IDKMLSNK 457
>gi|356534864|ref|XP_003535971.1| PREDICTED: uncharacterized protein all1601-like [Glycine max]
Length = 452
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/428 (88%), Positives = 412/428 (96%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
K L++DWR +SKPIPPGGTYPAKDHCSRCGLCDTYYIAHVK+ACAFLGDGMS+IE LE
Sbjct: 25 KDTSLKQDWRTKSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKNACAFLGDGMSKIERLE 84
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VVHGRGR+ D+LD+TYLGV+EELLYARK PVEGAQWTGIVTTIAIEMLK+GMVEAV+C
Sbjct: 85 PVVHGRGRKTDNLDETYLGVYEELLYARKLNPVEGAQWTGIVTTIAIEMLKSGMVEAVIC 144
Query: 158 VQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 217
VQSDPDDR +PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ
Sbjct: 145 VQSDPDDRFAPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 204
Query: 218 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 277
ALRSVEHHLNL+KLYVLGTNCVDNGTR+GLDKFLKAAS PETVLHYEFMQDYKVHLKHL
Sbjct: 205 ALRSVEHHLNLDKLYVLGTNCVDNGTRQGLDKFLKAASQSPETVLHYEFMQDYKVHLKHL 264
Query: 278 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 337
DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKY+GI MTQHPQY+
Sbjct: 265 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYSGIGMTQHPQYV 324
Query: 338 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 397
TVRNERG+EMLSL++NLLEITPTIS+GDRRPFVMETVKADD AK+GRGPSQPAPKF+GNL
Sbjct: 325 TVRNERGREMLSLIENLLEITPTISTGDRRPFVMETVKADDEAKLGRGPSQPAPKFIGNL 384
Query: 398 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 457
+AF +NL+GPKGLEFARYSLDYHTIRNYLHVNR WGK+RAD+HMP+YAKKIV++YNQNGQ
Sbjct: 385 LAFILNLIGPKGLEFARYSLDYHTIRNYLHVNRMWGKERADRHMPTYAKKIVDLYNQNGQ 444
Query: 458 IDQMLSSK 465
I++MLS+K
Sbjct: 445 IEKMLSNK 452
>gi|297848696|ref|XP_002892229.1| coenzyme F420 hydrogenase family [Arabidopsis lyrata subsp. lyrata]
gi|297338071|gb|EFH68488.1| coenzyme F420 hydrogenase family [Arabidopsis lyrata subsp. lyrata]
Length = 461
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/458 (85%), Positives = 421/458 (91%), Gaps = 2/458 (0%)
Query: 8 AKFSSLPLSISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSR 67
+K S LP S + ++SSS S + + K VKLREDWR++SKPIPPGGTYPAKDHCSR
Sbjct: 6 SKLSLLPPCFSVV--NTSSSRSKDMNTEPKKKVKLREDWREKSKPIPPGGTYPAKDHCSR 63
Query: 68 CGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKT 127
CGLCDTYYIAHVK+ACAFLGDGMSRIE LE VVHGRGR+ DSL+DTY GVH+E LYARK
Sbjct: 64 CGLCDTYYIAHVKEACAFLGDGMSRIESLEPVVHGRGRKPDSLEDTYFGVHQEQLYARKL 123
Query: 128 KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKP 187
KPVEGAQWTGIVTTIAIEMLK+ MVEAVVCVQSDP+DRLSPRPVLARTPEEVLAA+GVKP
Sbjct: 124 KPVEGAQWTGIVTTIAIEMLKSNMVEAVVCVQSDPEDRLSPRPVLARTPEEVLAARGVKP 183
Query: 188 TLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGL 247
TLSPNLNTL L+EA+GVKRLLFCGVGCQVQALRSVE HLNLEKLYVLGTNCVDNGTR+GL
Sbjct: 184 TLSPNLNTLELIEASGVKRLLFCGVGCQVQALRSVEQHLNLEKLYVLGTNCVDNGTRDGL 243
Query: 248 DKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFD 307
DKFLKAAS EPETVLHYEFMQDYKV LKHLDGHIEEVPYF LPANDLVDVIAPSCYSCFD
Sbjct: 244 DKFLKAASKEPETVLHYEFMQDYKVQLKHLDGHIEEVPYFSLPANDLVDVIAPSCYSCFD 303
Query: 308 YTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRR 367
YTNALADLV+GYMGVPKY+G++MT HPQYITVRNERGKEMLSLV+NLLEITPTISSGDRR
Sbjct: 304 YTNALADLVIGYMGVPKYSGLNMTDHPQYITVRNERGKEMLSLVENLLEITPTISSGDRR 363
Query: 368 PFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLH 427
PFV ETVKADDNAK GRGP+QPAP FVGN+IAF ++LVGPKGLEFARYSLDYHTIRNYLH
Sbjct: 364 PFVTETVKADDNAKFGRGPAQPAPIFVGNIIAFILSLVGPKGLEFARYSLDYHTIRNYLH 423
Query: 428 VNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSSK 465
VNR WGK+RA+ HMPSYAKKIVEMYN+NG ID+MLS K
Sbjct: 424 VNRKWGKQRANIHMPSYAKKIVEMYNKNGHIDKMLSRK 461
>gi|449487600|ref|XP_004157707.1| PREDICTED: LOW QUALITY PROTEIN: 7-hydroxymethyl chlorophyll a
reductase, chloroplastic-like [Cucumis sativus]
Length = 459
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/459 (84%), Positives = 430/459 (93%), Gaps = 4/459 (0%)
Query: 6 ANAKFSSLPLSISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHC 65
A A SLPLS+ +C SSSSSSP+ K VKLR+DWR+RS+PIPPGGTYPAK+ C
Sbjct: 3 AIANLCSLPLSLPILC----SSSSSSPNGKEPKQVKLRDDWRQRSRPIPPGGTYPAKEQC 58
Query: 66 SRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYAR 125
SRCGLCDTYYIAHVKDACAFLGDGMSRIE +E VVHGRGR+ D+LD+TY GVHE+LLYAR
Sbjct: 59 SRCGLCDTYYIAHVKDACAFLGDGMSRIEEMEPVVHGRGRKXDTLDETYFGVHEKLLYAR 118
Query: 126 KTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGV 185
K KPVEGAQWTGIVTTIA+EMLK+GMVEAVVCVQSDP+DRLSPRP+LARTPEEVLAA+GV
Sbjct: 119 KIKPVEGAQWTGIVTTIAVEMLKSGMVEAVVCVQSDPEDRLSPRPILARTPEEVLAARGV 178
Query: 186 KPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTRE 245
KPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE HLNLEKLYVLGTNCVDNGTRE
Sbjct: 179 KPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEQHLNLEKLYVLGTNCVDNGTRE 238
Query: 246 GLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSC 305
GLDKFLKAAS+EPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSC
Sbjct: 239 GLDKFLKAASTEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSC 298
Query: 306 FDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGD 365
FDYTNALADLVVGYMGVPKY+GISMTQHPQYITVRNERG+EML LV+ LEITPTIS+G+
Sbjct: 299 FDYTNALADLVVGYMGVPKYSGISMTQHPQYITVRNERGREMLGLVEQYLEITPTISNGN 358
Query: 366 RRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNY 425
RRP VMETVKADD+AK+G+GPSQPAPKF+GN+IAFF+NL+GPKGLEFARYSLDYHTIRN+
Sbjct: 359 RRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIGPKGLEFARYSLDYHTIRNH 418
Query: 426 LHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSS 464
L+V+R WGK+RADKH P+YAKKIV++YNQ G+ID++LS+
Sbjct: 419 LYVSRIWGKQRADKHEPTYAKKIVDLYNQKGEIDRILSN 457
>gi|449433213|ref|XP_004134392.1| PREDICTED: 7-hydroxymethyl chlorophyll a reductase,
chloroplastic-like [Cucumis sativus]
Length = 459
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/459 (84%), Positives = 430/459 (93%), Gaps = 4/459 (0%)
Query: 6 ANAKFSSLPLSISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHC 65
A A SLPLS+ +C SSSSSSP+ K VKLR+DWR+RS+PIPPGGTYPAK+ C
Sbjct: 3 AIANLCSLPLSLPILC----SSSSSSPNGKEPKQVKLRDDWRQRSRPIPPGGTYPAKEQC 58
Query: 66 SRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYAR 125
SRCGLCDTYYIAHVKDACAFLGDGMSRIE +E VVHGRGR+ D+LD+TY GVHE+LLYAR
Sbjct: 59 SRCGLCDTYYIAHVKDACAFLGDGMSRIEEMEPVVHGRGRKTDTLDETYFGVHEKLLYAR 118
Query: 126 KTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGV 185
K KPVEGAQWTGIVTTIA+EMLK+GMVEAVVCVQSDP+DRLSPRP+LARTPEEVLAA+GV
Sbjct: 119 KIKPVEGAQWTGIVTTIAVEMLKSGMVEAVVCVQSDPEDRLSPRPILARTPEEVLAARGV 178
Query: 186 KPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTRE 245
KPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE HLNLEKLYVLGTNCVDNGTRE
Sbjct: 179 KPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEQHLNLEKLYVLGTNCVDNGTRE 238
Query: 246 GLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSC 305
GLDKFLKAAS+EPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSC
Sbjct: 239 GLDKFLKAASTEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSC 298
Query: 306 FDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGD 365
FDYTNALADLVVGYMGVPKY+GISMTQHPQYITVRNERG+EML LV+ LEITPTIS+G+
Sbjct: 299 FDYTNALADLVVGYMGVPKYSGISMTQHPQYITVRNERGREMLGLVEQYLEITPTISNGN 358
Query: 366 RRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNY 425
RRP VMETVKADD+AK+G+GPSQPAPKF+GN+IAFF+NL+GPKGLEFARYSLDYHTIRN+
Sbjct: 359 RRPLVMETVKADDDAKLGKGPSQPAPKFIGNIIAFFLNLIGPKGLEFARYSLDYHTIRNH 418
Query: 426 LHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSS 464
L+V+R WGK+RADKH P+YAKKIV++YNQ G+ID++LS+
Sbjct: 419 LYVSRIWGKQRADKHEPTYAKKIVDLYNQKGEIDRILSN 457
>gi|356577586|ref|XP_003556905.1| PREDICTED: uncharacterized protein all1601-like [Glycine max]
Length = 452
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/465 (82%), Positives = 421/465 (90%), Gaps = 13/465 (2%)
Query: 1 MTCFIANAKFSSLPLSISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYP 60
M+ AK SSL +S++ SS SKD S L++DWR +SKPIPPGGTYP
Sbjct: 1 MSSLFLYAKLSSLSISLTI---------RSSSSKDTS----LKQDWRTKSKPIPPGGTYP 47
Query: 61 AKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEE 120
AKDHCSRCGLCDTYYIAHVK+ACAFLGDGMS IE LE VVHGRGR+ D++D+TYLGV+EE
Sbjct: 48 AKDHCSRCGLCDTYYIAHVKNACAFLGDGMSNIERLEPVVHGRGRKTDNMDETYLGVYEE 107
Query: 121 LLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVL 180
LLYARK +P EGAQWTGIVTTIAIEMLK+GMVEAV+CVQSDPDD+ +PRPVLARTPEEVL
Sbjct: 108 LLYARKLQPAEGAQWTGIVTTIAIEMLKSGMVEAVICVQSDPDDKFAPRPVLARTPEEVL 167
Query: 181 AAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVD 240
AAKGVKPTLSPNLNTLALVEAAGVKRLLFC VGCQVQALRSVEHHLNL+KLYVLGTNCVD
Sbjct: 168 AAKGVKPTLSPNLNTLALVEAAGVKRLLFCVVGCQVQALRSVEHHLNLDKLYVLGTNCVD 227
Query: 241 NGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAP 300
NGTREGLDKFLKAAS PE VLHYEFMQDYKVHLKHLDGHIEEVPYFCLP NDLVDVIAP
Sbjct: 228 NGTREGLDKFLKAASQSPEIVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPTNDLVDVIAP 287
Query: 301 SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPT 360
SCYSCFDYTNAL DLVVGYMGVPK++GI MTQHPQY+TVRN+RG+EMLSL++ LLEITPT
Sbjct: 288 SCYSCFDYTNALVDLVVGYMGVPKHSGIGMTQHPQYVTVRNKRGREMLSLIEKLLEITPT 347
Query: 361 ISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYH 420
IS+G+RRPFVMETVKADD AK+GRGPSQPAPKF+G+L+AF +NLVGPKGLEFARYSLDYH
Sbjct: 348 ISTGNRRPFVMETVKADDEAKLGRGPSQPAPKFIGSLLAFILNLVGPKGLEFARYSLDYH 407
Query: 421 TIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSSK 465
TIRNYLHVNR WGK+RADKHMP+YAKKIV+ YNQNGQI++MLS+K
Sbjct: 408 TIRNYLHVNRMWGKERADKHMPTYAKKIVDSYNQNGQIEKMLSNK 452
>gi|30678943|ref|NP_171956.2| coenzyme F420 hydrogenase beta subunit [Arabidopsis thaliana]
gi|75150253|sp|Q8GS60.1|HCAR_ARATH RecName: Full=7-hydroxymethyl chlorophyll a reductase,
chloroplastic; Flags: Precursor
gi|25083091|gb|AAN72040.1| unknown protein [Arabidopsis thaliana]
gi|26451024|dbj|BAC42618.1| unknown protein [Arabidopsis thaliana]
gi|30387563|gb|AAP31947.1| At1g04620 [Arabidopsis thaliana]
gi|332189601|gb|AEE27722.1| coenzyme F420 hydrogenase beta subunit [Arabidopsis thaliana]
Length = 462
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/428 (88%), Positives = 405/428 (94%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
K VKLREDWR++S+PIPPGGTYPAKDHCS+CGLCDTYYIAHVK+ACAFLGDGMSRIE LE
Sbjct: 35 KKVKLREDWREKSRPIPPGGTYPAKDHCSQCGLCDTYYIAHVKEACAFLGDGMSRIESLE 94
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VVHGRGR+ DSL DTY GVH+E LYARK KPVEGAQWTGIVTTIAIEMLK+ MVEAVVC
Sbjct: 95 PVVHGRGRKADSLQDTYFGVHQEQLYARKLKPVEGAQWTGIVTTIAIEMLKSNMVEAVVC 154
Query: 158 VQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 217
VQSDP+DRLSPRPVLARTPEEVLAA+GVKPTLSPNLNTL L+EA+GVKRLLFCGVGCQVQ
Sbjct: 155 VQSDPEDRLSPRPVLARTPEEVLAARGVKPTLSPNLNTLELIEASGVKRLLFCGVGCQVQ 214
Query: 218 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 277
ALRSVE HLNLEKLYVLGTNCVDNGTR+GLDKFLKAAS EPETVLHYEFMQDYKV LKHL
Sbjct: 215 ALRSVEQHLNLEKLYVLGTNCVDNGTRDGLDKFLKAASKEPETVLHYEFMQDYKVQLKHL 274
Query: 278 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 337
DGHIEEVPYF LPANDLVDVIAPSCYSCFDYTNALADLV+GYMGVPKY+G++MT HPQYI
Sbjct: 275 DGHIEEVPYFSLPANDLVDVIAPSCYSCFDYTNALADLVIGYMGVPKYSGLNMTDHPQYI 334
Query: 338 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 397
TVRNERGKEMLSLV+NLLEITPTISSGDRRPFV ETVKADD AK G+GP+QPAP FVGN+
Sbjct: 335 TVRNERGKEMLSLVENLLEITPTISSGDRRPFVTETVKADDAAKFGQGPAQPAPLFVGNI 394
Query: 398 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 457
IAF +NLVGPKGLEFARYSLDYHTIRNYL+VNR WGK+RA+ HMPSYAKKIVEMYN+NGQ
Sbjct: 395 IAFILNLVGPKGLEFARYSLDYHTIRNYLYVNRKWGKQRANTHMPSYAKKIVEMYNKNGQ 454
Query: 458 IDQMLSSK 465
ID+MLS K
Sbjct: 455 IDKMLSKK 462
>gi|224110688|ref|XP_002315601.1| predicted protein [Populus trichocarpa]
gi|222864641|gb|EEF01772.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/423 (88%), Positives = 401/423 (94%)
Query: 43 REDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHG 102
REDWR+RSKPIPPGG YPAKDHCS+CGLCDTYY+AHVK+ACAFLGDGMS+IEGLE VVHG
Sbjct: 34 REDWRQRSKPIPPGGIYPAKDHCSQCGLCDTYYVAHVKNACAFLGDGMSKIEGLEPVVHG 93
Query: 103 RGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDP 162
RGR+ DS D+ Y GVHEELLYARKTKPVEGAQWTGIVT+IAIEMLK+GMVEAV+CVQSDP
Sbjct: 94 RGRKADSFDEAYFGVHEELLYARKTKPVEGAQWTGIVTSIAIEMLKSGMVEAVICVQSDP 153
Query: 163 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSV 222
+DR SPRPVLARTP+EVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSV
Sbjct: 154 EDRFSPRPVLARTPDEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSV 213
Query: 223 EHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIE 282
EHHLNL+KLYVLGTNCVDNGTREGLDKFLKAAS EPETVLHYEFMQDYKVHLKHLDG IE
Sbjct: 214 EHHLNLDKLYVLGTNCVDNGTREGLDKFLKAASDEPETVLHYEFMQDYKVHLKHLDGRIE 273
Query: 283 EVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNE 342
EVPYFCLPAN+LVDVIAPSCYSCFDYTNALADLVVGYMGVPKY G+SMTQHPQYITVRNE
Sbjct: 274 EVPYFCLPANELVDVIAPSCYSCFDYTNALADLVVGYMGVPKYPGVSMTQHPQYITVRNE 333
Query: 343 RGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFI 402
RG+EM+ LVKNLLEITPTI+SGDRRPFVMETV ADDNAK+G+GPSQP PKF+GN IAF +
Sbjct: 334 RGREMIGLVKNLLEITPTINSGDRRPFVMETVNADDNAKLGKGPSQPLPKFIGNFIAFLL 393
Query: 403 NLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQML 462
NLVGPKGLEFARYSLDYHTIRNYL+ NR WGK RAD+H PSYAKKIVE YN+NGQID ML
Sbjct: 394 NLVGPKGLEFARYSLDYHTIRNYLYTNRTWGKDRADRHTPSYAKKIVESYNKNGQIDLML 453
Query: 463 SSK 465
+K
Sbjct: 454 QNK 456
>gi|2494116|gb|AAB80625.1| Similar to Synechocystis hypothetical protein (gb|D90915)
[Arabidopsis thaliana]
Length = 433
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/428 (85%), Positives = 394/428 (92%), Gaps = 12/428 (2%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
K VKLREDWR++S+PIPPGGTYPAKDHCS+CGLCDTYYIAHVK+ACAFLGDGMSRIE LE
Sbjct: 18 KKVKLREDWREKSRPIPPGGTYPAKDHCSQCGLCDTYYIAHVKEACAFLGDGMSRIESLE 77
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VVHGRGR+ DSL DTY GVH+E LYARK KPVEGAQWTGIVTTIAIEMLK+ MVEAVVC
Sbjct: 78 PVVHGRGRKADSLQDTYFGVHQEQLYARKLKPVEGAQWTGIVTTIAIEMLKSNMVEAVVC 137
Query: 158 VQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 217
VQSDP+DRLSPRPVLARTPEEVLAA+GVKPTLSPNLNTL L+EA+GVKRLLFCGVGCQVQ
Sbjct: 138 VQSDPEDRLSPRPVLARTPEEVLAARGVKPTLSPNLNTLELIEASGVKRLLFCGVGCQVQ 197
Query: 218 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 277
ALRSVE HLNLEKLYVLGTNCVDNGTR+GLDKFLKAAS EPETVLHYEFMQDYK
Sbjct: 198 ALRSVEQHLNLEKLYVLGTNCVDNGTRDGLDKFLKAASKEPETVLHYEFMQDYK------ 251
Query: 278 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 337
VPYF LPANDLVDVIAPSCYSCFDYTNALADLV+GYMGVPKY+G++MT HPQYI
Sbjct: 252 ------VPYFSLPANDLVDVIAPSCYSCFDYTNALADLVIGYMGVPKYSGLNMTDHPQYI 305
Query: 338 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 397
TVRNERGKEMLSLV+NLLEITPTISSGDRRPFV ETVKADD AK G+GP+QPAP FVGN+
Sbjct: 306 TVRNERGKEMLSLVENLLEITPTISSGDRRPFVTETVKADDAAKFGQGPAQPAPLFVGNI 365
Query: 398 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 457
IAF +NLVGPKGLEFARYSLDYHTIRNYL+VNR WGK+RA+ HMPSYAKKIVEMYN+NGQ
Sbjct: 366 IAFILNLVGPKGLEFARYSLDYHTIRNYLYVNRKWGKQRANTHMPSYAKKIVEMYNKNGQ 425
Query: 458 IDQMLSSK 465
ID+MLS K
Sbjct: 426 IDKMLSKK 433
>gi|75144471|sp|Q7XTG7.2|HCAR_ORYSJ RecName: Full=7-hydroxymethyl chlorophyll a reductase,
chloroplastic; Flags: Precursor
gi|38344778|emb|CAE01504.2| OSJNBb0026L04.9 [Oryza sativa Japonica Group]
gi|38347660|emb|CAE04699.2| OSJNBa0041M06.1 [Oryza sativa Japonica Group]
gi|116309054|emb|CAH66165.1| H0107B07.4 [Oryza sativa Indica Group]
Length = 471
Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/461 (81%), Positives = 412/461 (89%), Gaps = 9/461 (1%)
Query: 11 SSLPLSISTICCSSSSSSSSSPSKDGSKSVK--------LREDWRKRSKPIPPGGTYPAK 62
SSLP + CCS SS SSPS + K LREDWR+RSK IPPGG YPAK
Sbjct: 12 SSLPCATKPPCCSVSSVLPSSPSSHQCRGRKTSCGSIRALREDWRERSKAIPPGGVYPAK 71
Query: 63 DHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
DHCS+CGLCDTYYIAHVK+ACAFLGDGMSR+E LE +VHGRGR++D +D+ Y GV+E+LL
Sbjct: 72 DHCSQCGLCDTYYIAHVKNACAFLGDGMSRVEDLEPLVHGRGRKQD-MDEMYFGVYEQLL 130
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
YARK KPVEGAQWTGIVTTIA+EMLK MV+AVVCVQSDPDDRL+P PVLARTP+EV+AA
Sbjct: 131 YARKMKPVEGAQWTGIVTTIAVEMLKANMVDAVVCVQSDPDDRLAPMPVLARTPDEVIAA 190
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNG 242
KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE +L LEKLYVLGTNCVDNG
Sbjct: 191 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEKYLGLEKLYVLGTNCVDNG 250
Query: 243 TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSC 302
TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPA DLVDVIAPSC
Sbjct: 251 TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAKDLVDVIAPSC 310
Query: 303 YSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTIS 362
YSCFDYTN LADLVVGYMGVPKY G+SMTQHPQYITVRN+RG+EMLSLV+ LLE TPT+S
Sbjct: 311 YSCFDYTNGLADLVVGYMGVPKYPGVSMTQHPQYITVRNDRGREMLSLVEGLLESTPTVS 370
Query: 363 SGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTI 422
SG R+PFV+ETVKADD AK GRGPSQPAP FVGN+IAF +NL+GPKGLEFARYSLDYHTI
Sbjct: 371 SGVRQPFVIETVKADDEAKQGRGPSQPAPTFVGNVIAFLLNLIGPKGLEFARYSLDYHTI 430
Query: 423 RNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLS 463
RNYLHVNRAWGK+RA++H+PSYAKKIVE Y+++G+I+ ML
Sbjct: 431 RNYLHVNRAWGKQRAEQHIPSYAKKIVEAYDKDGRIESMLQ 471
>gi|326525733|dbj|BAJ88913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/421 (85%), Positives = 393/421 (93%), Gaps = 1/421 (0%)
Query: 42 LREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVH 101
LREDWR++S+PIPPGG YPAKD CS CGLCDTYYIAHV +ACAFLGDGMSR+E LE VVH
Sbjct: 48 LREDWREKSRPIPPGGVYPAKDKCSNCGLCDTYYIAHVNNACAFLGDGMSRVEDLEPVVH 107
Query: 102 GRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSD 161
GRGR KD++D+ Y GVHE+LLYARKT+PV+GAQWTGI+TTIA+EMLK MV+AVVCVQSD
Sbjct: 108 GRGR-KDTMDEMYYGVHEQLLYARKTEPVQGAQWTGIITTIAVEMLKANMVDAVVCVQSD 166
Query: 162 PDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRS 221
PDDR +PRPVLARTPEEV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRS
Sbjct: 167 PDDRFAPRPVLARTPEEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRS 226
Query: 222 VEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI 281
VE +L LEKLYVLGTNCVDNGTREGLDKFL AASSEPETVLHYEFMQDYKVHLKHLDGHI
Sbjct: 227 VEKYLGLEKLYVLGTNCVDNGTREGLDKFLNAASSEPETVLHYEFMQDYKVHLKHLDGHI 286
Query: 282 EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRN 341
EEVPYF LPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY+G+SMTQHPQYITVRN
Sbjct: 287 EEVPYFSLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYSGVSMTQHPQYITVRN 346
Query: 342 ERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFF 401
ERG+EMLSLV++LLE TPT+SSG R+PFVMETVKADD AKMG+GPS PAP FVGN+IAF
Sbjct: 347 ERGREMLSLVESLLESTPTVSSGARQPFVMETVKADDAAKMGKGPSNPAPIFVGNIIAFL 406
Query: 402 INLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQM 461
+NL+GPKGLEF RYSLDYHTIRNYL+VNRAWG RA++HMPSYAKKIVE YN++G+ID M
Sbjct: 407 LNLIGPKGLEFGRYSLDYHTIRNYLYVNRAWGSSRAEQHMPSYAKKIVEAYNKDGRIDSM 466
Query: 462 L 462
L
Sbjct: 467 L 467
>gi|326528691|dbj|BAJ97367.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 483
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/423 (84%), Positives = 392/423 (92%), Gaps = 1/423 (0%)
Query: 42 LREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVH 101
LREDWR++S+PIPPGG YPAKD CS CGLCDTYYIAHV +ACAFLGDGMSR+E LE VVH
Sbjct: 60 LREDWREKSRPIPPGGVYPAKDKCSNCGLCDTYYIAHVNNACAFLGDGMSRVEDLEPVVH 119
Query: 102 GRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSD 161
GRGR KD++D+ Y GVHE+LLYARKT+PV+GAQWTGI+TTIA+EMLK MV+AVVCVQSD
Sbjct: 120 GRGR-KDTMDEMYYGVHEQLLYARKTEPVQGAQWTGIITTIAVEMLKANMVDAVVCVQSD 178
Query: 162 PDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRS 221
PDDR +PRPVLARTPEEV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRS
Sbjct: 179 PDDRFAPRPVLARTPEEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRS 238
Query: 222 VEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI 281
VE +L LEKLYVLGTNCVDNGTREGLDKFL AASSEPETVLHYEFMQDYKVHLKHLDGHI
Sbjct: 239 VEKYLGLEKLYVLGTNCVDNGTREGLDKFLNAASSEPETVLHYEFMQDYKVHLKHLDGHI 298
Query: 282 EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRN 341
EEVPYF LPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY+G+SMTQHPQYITVRN
Sbjct: 299 EEVPYFSLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYSGVSMTQHPQYITVRN 358
Query: 342 ERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFF 401
ERG+EMLSLV+ LLE TPT+SSG R+PFVMETVKADD AKMG+GPS PAP FVGN+IAF
Sbjct: 359 ERGREMLSLVEGLLESTPTVSSGARQPFVMETVKADDAAKMGKGPSNPAPIFVGNIIAFL 418
Query: 402 INLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQM 461
+NL+GPKGLEF RYSLDYHTIRNYL+VNRAWG RA++HMPSYAKKIVE YN++G+ID M
Sbjct: 419 LNLIGPKGLEFGRYSLDYHTIRNYLYVNRAWGSSRAEQHMPSYAKKIVEAYNKDGRIDSM 478
Query: 462 LSS 464
L
Sbjct: 479 LQQ 481
>gi|357144250|ref|XP_003573225.1| PREDICTED: uncharacterized protein all1601-like [Brachypodium
distachyon]
Length = 466
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/429 (82%), Positives = 394/429 (91%), Gaps = 1/429 (0%)
Query: 35 DGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIE 94
+G +REDWR++S PIPPGG YPAKD CSRCGLCDTYYIAHV ACAFLGDGMSR+E
Sbjct: 35 NGRGKKAVREDWREKSNPIPPGGVYPAKDKCSRCGLCDTYYIAHVNTACAFLGDGMSRVE 94
Query: 95 GLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEA 154
LE +VHGRGR KD++D+ Y GVH++LLY+RKT+PV+GAQWTGIVTTIA+EMLK MV+A
Sbjct: 95 DLEPIVHGRGR-KDTMDELYFGVHDQLLYSRKTQPVQGAQWTGIVTTIAVEMLKANMVDA 153
Query: 155 VVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGC 214
VVCVQSDP+DRL+PRPVLARTPEEV+AAKGVKPTLSPNL+TLALVEAAGVKRLLFCGVGC
Sbjct: 154 VVCVQSDPEDRLAPRPVLARTPEEVIAAKGVKPTLSPNLDTLALVEAAGVKRLLFCGVGC 213
Query: 215 QVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHL 274
QVQALRSVE +L LEKLYVLGTNCVDNGTREGLDKFLKAAS+EPETVLHYEFMQDYKVHL
Sbjct: 214 QVQALRSVEKYLGLEKLYVLGTNCVDNGTREGLDKFLKAASTEPETVLHYEFMQDYKVHL 273
Query: 275 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP 334
KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY+G+SMTQHP
Sbjct: 274 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYSGVSMTQHP 333
Query: 335 QYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFV 394
QYITVRNERG+EMLSLV+ LLE TPT+SSG R FVMETVKADD AKMG+GP+ PAP+FV
Sbjct: 334 QYITVRNERGREMLSLVEGLLESTPTVSSGAREAFVMETVKADDAAKMGKGPANPAPRFV 393
Query: 395 GNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQ 454
GN+IAF +NL+GPKGLEF RYSLDYHTIRNYL+V RAWG RA++HMPSYAKKIVE YN+
Sbjct: 394 GNIIAFLLNLIGPKGLEFGRYSLDYHTIRNYLYVKRAWGSTRAEQHMPSYAKKIVEAYNK 453
Query: 455 NGQIDQMLS 463
+G+ID ML
Sbjct: 454 DGRIDSMLQ 462
>gi|414869973|tpg|DAA48530.1| TPA: hypothetical protein ZEAMMB73_316791 [Zea mays]
Length = 470
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/427 (82%), Positives = 396/427 (92%), Gaps = 2/427 (0%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
++ +REDWR++SKPIPPG YPAKDHCSRCGLCDTYY+AHVK ACAFLGDGMSR+E LE
Sbjct: 43 RAKAVREDWRQKSKPIPPGAVYPAKDHCSRCGLCDTYYVAHVKTACAFLGDGMSRVEDLE 102
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VHGRGR K+ +D+ Y GV+++LLYARKT+PVEGAQWTGIVTTIA+EMLK MV+AVVC
Sbjct: 103 RQVHGRGR-KEGMDEMYFGVYDQLLYARKTEPVEGAQWTGIVTTIAVEMLKANMVDAVVC 161
Query: 158 VQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 217
VQSDPDDRL+PRPVLARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ
Sbjct: 162 VQSDPDDRLAPRPVLARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 221
Query: 218 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 277
ALRSVE +L LEKLYVLGTN DNGTREGLDKFLKAASSEPETV+HYEFMQDYKVHLKHL
Sbjct: 222 ALRSVEKYLGLEKLYVLGTN-FDNGTREGLDKFLKAASSEPETVMHYEFMQDYKVHLKHL 280
Query: 278 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 337
DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY G+SMTQHPQYI
Sbjct: 281 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYAGVSMTQHPQYI 340
Query: 338 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 397
TVRN+RG+EML+LV LLE TPTISSG R+PFVMETVKADD AK+G+GPS+PAP+FVG++
Sbjct: 341 TVRNDRGQEMLNLVAGLLESTPTISSGSRQPFVMETVKADDAAKLGKGPSKPAPRFVGDI 400
Query: 398 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 457
+AF +NLVGPKGLEFARYSLDYHTIRNYLHV RAWGK+RA++H+P YAKKIVE Y+++G+
Sbjct: 401 LAFLLNLVGPKGLEFARYSLDYHTIRNYLHVRRAWGKQRAEQHIPGYAKKIVEAYDKDGR 460
Query: 458 IDQMLSS 464
I+ M++
Sbjct: 461 IEAMVTQ 467
>gi|148906965|gb|ABR16627.1| unknown [Picea sitchensis]
Length = 462
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/464 (76%), Positives = 401/464 (86%), Gaps = 8/464 (1%)
Query: 2 TCFIANAKFSSLPLSISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPA 61
+C +KF L + +S C SSS +S K ++LR+DWR+RS+PI PGG YPA
Sbjct: 7 SCTPFFSKFQPLFVPLSVRCSSSSGASR--------KEIQLRDDWRERSRPITPGGIYPA 58
Query: 62 KDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEEL 121
KDHCS+CGLCDTYYIAHVK AC+FLGDGMS+IE LE VHGRGR++DSLDD Y GVHEE+
Sbjct: 59 KDHCSQCGLCDTYYIAHVKKACSFLGDGMSKIEVLEPRVHGRGRKEDSLDDLYFGVHEEV 118
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLA 181
YARK +P+EGAQWTGIVTTIAIEML++ V+AV+CVQSD +DR SP+P LARTPEEVLA
Sbjct: 119 NYARKIEPLEGAQWTGIVTTIAIEMLRSNKVDAVICVQSDAEDRFSPKPFLARTPEEVLA 178
Query: 182 AKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDN 241
+GVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALR+VE +L LEKLYVLGTNCVDN
Sbjct: 179 GRGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRTVEKYLGLEKLYVLGTNCVDN 238
Query: 242 GTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPS 301
GTREGLDKFLK AS P+TVLHYEFMQDYKVHLKHLDGH EEVPYFCLPA++L DVIAPS
Sbjct: 239 GTREGLDKFLKVASDSPDTVLHYEFMQDYKVHLKHLDGHTEEVPYFCLPADELTDVIAPS 298
Query: 302 CYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTI 361
CYSCFDYTNALADLVVGYMGVPKY GISMTQHPQYITVRNERG+EML + ++LLEITPT+
Sbjct: 299 CYSCFDYTNALADLVVGYMGVPKYPGISMTQHPQYITVRNERGREMLDMARHLLEITPTV 358
Query: 362 SSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHT 421
SSG RR FVMETVKADD AK +G SQP P+FVGN IAF +NL GPKGLEFARYSLDYHT
Sbjct: 359 SSGKRRSFVMETVKADDKAKTAKGNSQPVPRFVGNAIAFILNLFGPKGLEFARYSLDYHT 418
Query: 422 IRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSSK 465
IRNYLHV R WGK+RA+KH+PSYAKKIV MYN NG+ID++L +K
Sbjct: 419 IRNYLHVYRTWGKQRAEKHIPSYAKKIVTMYNDNGEIDKLLFTK 462
>gi|242079547|ref|XP_002444542.1| hypothetical protein SORBIDRAFT_07g023570 [Sorghum bicolor]
gi|241940892|gb|EES14037.1| hypothetical protein SORBIDRAFT_07g023570 [Sorghum bicolor]
Length = 478
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/427 (81%), Positives = 395/427 (92%), Gaps = 1/427 (0%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
++ LREDWR++SKPIPPG YPAKDHCS CGLCDTYY+AHVK ACAFLG+GMSR+E LE
Sbjct: 50 RAKALREDWRQKSKPIPPGAVYPAKDHCSHCGLCDTYYVAHVKTACAFLGEGMSRVEDLE 109
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VHGRGR K+ +D+ Y GV+++LLYARKT+PV+GAQWTGIVTTIA+EMLK +V+AVVC
Sbjct: 110 PQVHGRGR-KEGMDEMYFGVYDQLLYARKTEPVQGAQWTGIVTTIAVEMLKANLVDAVVC 168
Query: 158 VQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 217
VQSDPDDRL+PRPVLARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ
Sbjct: 169 VQSDPDDRLAPRPVLARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 228
Query: 218 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 277
ALRSVE +L LEKLYVLGTNCVDNGTREGLDKFLKAAS+EPETV+HYEFMQDYKVHLKHL
Sbjct: 229 ALRSVEKYLGLEKLYVLGTNCVDNGTREGLDKFLKAASNEPETVMHYEFMQDYKVHLKHL 288
Query: 278 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 337
DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY G+SMTQHPQYI
Sbjct: 289 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYAGVSMTQHPQYI 348
Query: 338 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 397
TVRN+RG+EMLSLV LLE TPTISSG R+PFVMETVKADD AK+G+ PS+PAP+FVG++
Sbjct: 349 TVRNDRGREMLSLVDGLLESTPTISSGSRQPFVMETVKADDAAKLGKDPSKPAPRFVGDI 408
Query: 398 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 457
+AF +NLVGPKGLEFARYSLDYHTIRNYLHV R WGK+RA++H+P YAKKIVE Y+++G+
Sbjct: 409 LAFLLNLVGPKGLEFARYSLDYHTIRNYLHVRRVWGKQRAEQHIPGYAKKIVEAYDKDGR 468
Query: 458 IDQMLSS 464
I+ M++
Sbjct: 469 IEAMVTQ 475
>gi|218192630|gb|EEC75057.1| hypothetical protein OsI_11171 [Oryza sativa Indica Group]
Length = 503
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/493 (75%), Positives = 412/493 (83%), Gaps = 41/493 (8%)
Query: 11 SSLPLSISTICCSSSSSSSSSPSKDGSKSVK--------LREDWRKRSKPIPPGGTYPAK 62
SSLP + CCS SS SSPS + K LREDWR+RSK IPPGG YPAK
Sbjct: 12 SSLPCATKPPCCSVSSVLPSSPSSHQCRGRKTSCGSIRALREDWRERSKAIPPGGVYPAK 71
Query: 63 DHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
DHCS+CGLCDTYYIAHVK+ACAFLGDGMSR+E LE +VHGRGR++D +D+ Y GV+E+LL
Sbjct: 72 DHCSQCGLCDTYYIAHVKNACAFLGDGMSRVEDLEPLVHGRGRKQD-MDEMYFGVYEQLL 130
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQ----------------------- 159
YARK KPVEGAQWTGIVTTIA+EMLK MV+AVVCVQ
Sbjct: 131 YARKMKPVEGAQWTGIVTTIAVEMLKANMVDAVVCVQRHLNNNQILHNCFPLQKDFFHGL 190
Query: 160 ---------SDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFC 210
SDPDDRL+P PVLARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFC
Sbjct: 191 EKTVVCLLCSDPDDRLAPMPVLARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFC 250
Query: 211 GVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY 270
GVGCQVQALRSVE +L LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY
Sbjct: 251 GVGCQVQALRSVEKYLGLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY 310
Query: 271 KVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISM 330
KVHLKHLDGHIEEVPYFCLPA DLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY G+SM
Sbjct: 311 KVHLKHLDGHIEEVPYFCLPAKDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYPGVSM 370
Query: 331 TQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPA 390
TQHPQYITVRN+RG+EMLSLV+ LLE TPT+SSG R+PFV+ETVKADD AK GRGPSQPA
Sbjct: 371 TQHPQYITVRNDRGREMLSLVEGLLESTPTVSSGVRQPFVIETVKADDEAKQGRGPSQPA 430
Query: 391 PKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVE 450
P FVGN+IAF +NL+GPKGLEFARYSLDYHTIRNYLHVNRAWGK+RA++H+PSYAKKIVE
Sbjct: 431 PTFVGNVIAFLLNLIGPKGLEFARYSLDYHTIRNYLHVNRAWGKQRAEQHIPSYAKKIVE 490
Query: 451 MYNQNGQIDQMLS 463
Y+++G+I+ ML
Sbjct: 491 AYDKDGRIESMLQ 503
>gi|212722724|ref|NP_001131424.1| uncharacterized protein LOC100192754 [Zea mays]
gi|194691478|gb|ACF79823.1| unknown [Zea mays]
Length = 470
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/427 (81%), Positives = 395/427 (92%), Gaps = 2/427 (0%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
++ +REDWR++SKPIPPG YPAKDHCSRCGLCDTYY+AHVK ACAFLGDGMSR+E LE
Sbjct: 43 RAKAVREDWRQKSKPIPPGAVYPAKDHCSRCGLCDTYYVAHVKTACAFLGDGMSRVEDLE 102
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VHGRGR K+ +D+ Y GV+++LLYARKT+PVEGAQWTGIVTTIA+EMLK MV+AVVC
Sbjct: 103 RQVHGRGR-KEGMDEMYFGVYDQLLYARKTEPVEGAQWTGIVTTIAVEMLKANMVDAVVC 161
Query: 158 VQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 217
VQSDPDDRL+PRPVLARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ
Sbjct: 162 VQSDPDDRLAPRPVLARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 221
Query: 218 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 277
ALRSVE +L LEKLYVLGTN DNGTREGLDKFLKAASSEPETV+HYEFMQDYKVHLKHL
Sbjct: 222 ALRSVEKYLGLEKLYVLGTN-FDNGTREGLDKFLKAASSEPETVMHYEFMQDYKVHLKHL 280
Query: 278 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 337
DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY G+SMTQHPQYI
Sbjct: 281 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYAGVSMTQHPQYI 340
Query: 338 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNL 397
TVRN+RG+ ML+LV LLE TPTISSG R+PFVMETVKADD AK+G+GPS+PAP+FVG++
Sbjct: 341 TVRNDRGQVMLNLVAGLLESTPTISSGSRQPFVMETVKADDAAKLGKGPSKPAPRFVGDI 400
Query: 398 IAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 457
+AF +NLVGPKGLEFARYSLDYHTIRNYLHV RAWGK+RA++H+P YAKKIVE Y+++G+
Sbjct: 401 LAFLLNLVGPKGLEFARYSLDYHTIRNYLHVRRAWGKQRAEQHIPGYAKKIVEAYDKDGR 460
Query: 458 IDQMLSS 464
I+ M++
Sbjct: 461 IEAMVTQ 467
>gi|414869974|tpg|DAA48531.1| TPA: hypothetical protein ZEAMMB73_316791 [Zea mays]
Length = 512
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/468 (75%), Positives = 398/468 (85%), Gaps = 42/468 (8%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
++ +REDWR++SKPIPPG YPAKDHCSRCGLCDTYY+AHVK ACAFLGDGMSR+E LE
Sbjct: 43 RAKAVREDWRQKSKPIPPGAVYPAKDHCSRCGLCDTYYVAHVKTACAFLGDGMSRVEDLE 102
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VHGRGR K+ +D+ Y GV+++LLYARKT+PVEGAQWTGIVTTIA+EMLK MV+AVVC
Sbjct: 103 RQVHGRGR-KEGMDEMYFGVYDQLLYARKTEPVEGAQWTGIVTTIAVEMLKANMVDAVVC 161
Query: 158 VQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 217
VQSDPDDRL+PRPVLARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ
Sbjct: 162 VQSDPDDRLAPRPVLARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 221
Query: 218 ALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 277
ALRSVE +L LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETV+HYEFMQDYKVHLKHL
Sbjct: 222 ALRSVEKYLGLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVMHYEFMQDYKVHLKHL 281
Query: 278 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 337
DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY G+SMTQHPQYI
Sbjct: 282 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYAGVSMTQHPQYI 341
Query: 338 TVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKM--------------- 382
TVRN+RG+EML+LV LLE TPTISSG R+PFVMETVKADD AK+
Sbjct: 342 TVRNDRGQEMLNLVAGLLESTPTISSGSRQPFVMETVKADDAAKLGTSPNHHLYGILVLS 401
Query: 383 --------------------------GRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYS 416
G+GPS+PAP+FVG+++AF +NLVGPKGLEFARYS
Sbjct: 402 IGIELVVTMTIRLAYIHVNKQTNGSTGKGPSKPAPRFVGDILAFLLNLVGPKGLEFARYS 461
Query: 417 LDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSS 464
LDYHTIRNYLHV RAWGK+RA++H+P YAKKIVE Y+++G+I+ M++
Sbjct: 462 LDYHTIRNYLHVRRAWGKQRAEQHIPGYAKKIVEAYDKDGRIEAMVTQ 509
>gi|168035893|ref|XP_001770443.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678320|gb|EDQ64780.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/446 (74%), Positives = 384/446 (86%), Gaps = 3/446 (0%)
Query: 17 ISTICCSSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYI 76
+ T+ C S S+ + +V DWR+++KPI PG TYPAKDHCS+CGLCDTYYI
Sbjct: 1 MRTLICLVLSVSNVVVLGYATATVDSPSDWREKAKPIKPGSTYPAKDHCSQCGLCDTYYI 60
Query: 77 AHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWT 136
AHVKDACAFLGDGMSRIE LE VHGRGR +S++D + GVH+E+LYARKT+PVEGAQWT
Sbjct: 61 AHVKDACAFLGDGMSRIEVLEPKVHGRGRNPESMEDLFFGVHDEMLYARKTEPVEGAQWT 120
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 196
GIVTTIA+EML+ MV+AV+CVQSDP+DR P PVLARTPEEVLAA+GVKPTLSPNL+TL
Sbjct: 121 GIVTTIAMEMLRKDMVDAVICVQSDPEDRFKPNPVLARTPEEVLAARGVKPTLSPNLSTL 180
Query: 197 ALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASS 256
A VEAAGVKRLLFCGVGCQVQALRSVE HL LEKLYVLGTNCVDNG R+GLDKFLKAAS
Sbjct: 181 AFVEAAGVKRLLFCGVGCQVQALRSVEKHLGLEKLYVLGTNCVDNGPRQGLDKFLKAASD 240
Query: 257 EPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLV 316
+P+TVLHYEFMQDYK L + VPYFCLPA+DL DVIAPSCYSCFDYTN LADLV
Sbjct: 241 DPDTVLHYEFMQDYKALYHKL---LYCVPYFCLPADDLTDVIAPSCYSCFDYTNGLADLV 297
Query: 317 VGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKA 376
VGYMGVPKY G+ MT+HPQYITVRN RGKEML LV+ LL++TPTISSG+R PFVMETVKA
Sbjct: 298 VGYMGVPKYPGVPMTRHPQYITVRNGRGKEMLDLVRPLLDVTPTISSGNRGPFVMETVKA 357
Query: 377 DDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKR 436
DD AK+G+ +QPAP+FVGN+IA+ +NLVGPKGLEF RYSLDYH IRNYLHV+RAWG+KR
Sbjct: 358 DDKAKLGKEKTQPAPRFVGNIIAWLLNLVGPKGLEFGRYSLDYHNIRNYLHVHRAWGQKR 417
Query: 437 ADKHMPSYAKKIVEMYNQNGQIDQML 462
AD+H+PSYAKK+V +YN+NG+ID++L
Sbjct: 418 ADQHIPSYAKKLVSLYNKNGEIDKIL 443
>gi|222628616|gb|EEE60748.1| hypothetical protein OsJ_14296 [Oryza sativa Japonica Group]
Length = 455
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 329/493 (66%), Positives = 366/493 (74%), Gaps = 89/493 (18%)
Query: 11 SSLPLSISTICCSSSSSSSSSPSKDGSKSVK--------LREDWRKRSKPIPPGGTYPAK 62
SSLP + CCS SS SSPS + K LREDWR+RSK IPPGG YPAK
Sbjct: 12 SSLPCATKPPCCSVSSVLPSSPSSHQCRGRKTSCGSIRALREDWRERSKAIPPGGVYPAK 71
Query: 63 DHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
DHCS+CGLCDTYYIAHVK+ACAFLGDGMSR+E LE +VHGRGR++D +D+ Y GV+E+LL
Sbjct: 72 DHCSQCGLCDTYYIAHVKNACAFLGDGMSRVEDLEPLVHGRGRKQD-MDEMYFGVYEQLL 130
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQ----------------------- 159
YARK KPVEGAQWTGIVTTIA+EMLK MV+AVVCVQ
Sbjct: 131 YARKMKPVEGAQWTGIVTTIAVEMLKANMVDAVVCVQRHLNNNQILHNCFPLQKDFFHGL 190
Query: 160 ---------SDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFC 210
SDPDDRL+P PVLARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFC
Sbjct: 191 EKTVVCLLCSDPDDRLAPMPVLARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFC 250
Query: 211 GVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY 270
GVGCQVQALRSVE +L LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY
Sbjct: 251 GVGCQVQALRSVEKYLGLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY 310
Query: 271 KVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISM 330
K VPYFCLPA DLVDVIAPSCY
Sbjct: 311 K------------VPYFCLPAKDLVDVIAPSCY--------------------------- 331
Query: 331 TQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPA 390
RN+RG+EMLSLV+ LLE TPT+SSG R+PFV+ETVKADD AK GRGPSQPA
Sbjct: 332 ---------RNDRGREMLSLVEGLLESTPTVSSGVRQPFVIETVKADDEAKQGRGPSQPA 382
Query: 391 PKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVE 450
P FVGN+IAF +NL+GPKGLEFARYSLDYHTIRNYLHVNRAWGK+RA++H+PSYAKKIVE
Sbjct: 383 PTFVGNVIAFLLNLIGPKGLEFARYSLDYHTIRNYLHVNRAWGKQRAEQHIPSYAKKIVE 442
Query: 451 MYNQNGQIDQMLS 463
Y+++G+I+ ML
Sbjct: 443 AYDKDGRIESMLQ 455
>gi|255079718|ref|XP_002503439.1| predicted protein [Micromonas sp. RCC299]
gi|226518706|gb|ACO64697.1| predicted protein [Micromonas sp. RCC299]
Length = 530
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 283/424 (66%), Positives = 344/424 (81%), Gaps = 2/424 (0%)
Query: 39 SVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLET 98
S + EDWR++SKPI PGG YPAK+HCS+CGLCDTYYIAHVKDACAFLGDGMSRIE LE
Sbjct: 38 SAAIAEDWREKSKPIAPGGNYPAKEHCSQCGLCDTYYIAHVKDACAFLGDGMSRIETLEP 97
Query: 99 VVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCV 158
VHGRGR + D+ LGV +E+ YA++ +PVEGAQWTGIVT+IAIEMLK+G VE VVCV
Sbjct: 98 TVHGRGRDLGN-DEMRLGVVDEVFYAKRNRPVEGAQWTGIVTSIAIEMLKSGKVEGVVCV 156
Query: 159 QSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 218
SDPD+ + PRP+LA T EE+L++KGVKP LSPNL+ LA VEA G+KR+LF GVGC VQA
Sbjct: 157 ASDPDNAMHPRPILATTVEEILSSKGVKPALSPNLSVLAEVEARGLKRVLFIGVGCAVQA 216
Query: 219 LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 278
LRSVE +L LEKLYV+GTNC DNG +E L KFL+ AS +P TV+HYEFMQDY+VHLKH D
Sbjct: 217 LRSVEKYLGLEKLYVMGTNCTDNGRKETLSKFLENASEDPATVVHYEFMQDYQVHLKHTD 276
Query: 279 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 338
G E+VPYFCLPAN L DVIAPSCYSCFDY N LAD+VVGYMGVP Y MT+HPQY+T
Sbjct: 277 GSFEKVPYFCLPANKLKDVIAPSCYSCFDYVNGLADIVVGYMGVPYYH-TDMTRHPQYVT 335
Query: 339 VRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLI 398
VRNERGKEM +++ ++TP++SSG+R+PFVM+TV +DD A +GRGP +PAP VG I
Sbjct: 336 VRNERGKEMFDMIRGDCDVTPSVSSGERKPFVMQTVISDDEATLGRGPEEPAPLPVGKAI 395
Query: 399 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQI 458
A+ + +GPKG EF YSLDYHTIRNYL+V R +G++RA +H+P YA+ +V+ YN G +
Sbjct: 396 AWLLEKIGPKGKEFGMYSLDYHTIRNYLYVKRTFGEERATRHVPDYARLVVDEYNVYGAV 455
Query: 459 DQML 462
D+ L
Sbjct: 456 DERL 459
>gi|384250915|gb|EIE24393.1| hypothetical protein COCSUDRAFT_14021 [Coccomyxa subellipsoidea
C-169]
Length = 436
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 290/417 (69%), Positives = 335/417 (80%), Gaps = 6/417 (1%)
Query: 43 REDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHG 102
+ DWR ++KPI G TYPAK CS CGLCDTYY+AHVKDACAFLGDGMS+IE LE VHG
Sbjct: 24 KADWRSKAKPIKEGSTYPAKQFCSHCGLCDTYYVAHVKDACAFLGDGMSKIESLEEQVHG 83
Query: 103 RGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDP 162
R R DSLDD + GVHE+++YA T PV GAQWTGIVT IAIEML++G VEAVVCVQ+D
Sbjct: 84 RRRDLDSLDDLHFGVHEDMMYALNTPPVPGAQWTGIVTQIAIEMLESGQVEAVVCVQNDE 143
Query: 163 DDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSV 222
DR SP+P +AR E++L AKGVKPTLSPNLNTLA VEA VKRLLF G VQALRSV
Sbjct: 144 ADRFSPKPFVARCKEDILKAKGVKPTLSPNLNTLATVEALDVKRLLFIG----VQALRSV 199
Query: 223 EHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIE 282
E +L LE LYVLGTNCVDNG REGL+KFL AASS+P+TVLHYEFMQDY+VH+KHLDG E
Sbjct: 200 EKYLGLEALYVLGTNCVDNGPREGLEKFLNAASSDPDTVLHYEFMQDYRVHIKHLDGSFE 259
Query: 283 EVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNE 342
VPYFCLPANDL DVIAPSCYSCFDY NALADLVVGYMGVP Y G MT HPQYITVRN
Sbjct: 260 YVPYFCLPANDLTDVIAPSCYSCFDYPNALADLVVGYMGVP-YYGTDMTSHPQYITVRNA 318
Query: 343 RGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFI 402
RG+ M+ VK L+I PT+++GDR PFVM+TV +DD K+G P+ PAP+FVGN IA +
Sbjct: 319 RGRAMMDAVKPRLKILPTMAAGDRTPFVMQTVLSDDAGKLGTAPN-PAPRFVGNAIAKVL 377
Query: 403 NLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQID 459
+GPKGLEF RYS+DYH IRN+++VNR G RA +H P +AK++V MYN+ G+ID
Sbjct: 378 TWLGPKGLEFGRYSIDYHYIRNWIYVNRHMGPARAQRHTPEFAKRLVAMYNEKGEID 434
>gi|302842339|ref|XP_002952713.1| hypothetical protein VOLCADRAFT_93375 [Volvox carteri f.
nagariensis]
gi|300262057|gb|EFJ46266.1| hypothetical protein VOLCADRAFT_93375 [Volvox carteri f.
nagariensis]
Length = 496
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 284/450 (63%), Positives = 354/450 (78%), Gaps = 10/450 (2%)
Query: 24 SSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDAC 83
S +++P+++ S L DWR+RSKPI PG +YPAK +CS CGLCDTYY+AHVKDAC
Sbjct: 46 SDGIDAATPTRELGSSSPLPADWRQRSKPISPGSSYPAKQYCSSCGLCDTYYVAHVKDAC 105
Query: 84 AFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIA 143
AFLGDGMSR+E LE VHGR R + D+ + GV + YA T PVEGAQWTGIVT IA
Sbjct: 106 AFLGDGMSRVERLEERVHGRRRNANDDDELHFGVTRSMSYAVNTPPVEGAQWTGIVTQIA 165
Query: 144 IEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLA--------AKGVKPTLSPNLNT 195
IEML++G VEAVVCVQSD +DR +P+PV+ART E+++ A+GVKPTLSPNLN
Sbjct: 166 IEMLRSGKVEAVVCVQSDENDRFTPKPVVARTVEDIIKVGRGLWGRARGVKPTLSPNLNV 225
Query: 196 LALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAAS 255
LA VEA VK+LLF GVGCQVQALRS+E +L L+KLYVLGTNCVDNG R GLDKFL+AAS
Sbjct: 226 LATVEALQVKKLLFIGVGCQVQALRSIEPYLGLDKLYVLGTNCVDNGPRAGLDKFLRAAS 285
Query: 256 SEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADL 315
+ P+ LHYEFMQDY+VH+KH DG E VPYFCLPA +L DVIAPSCYSCFDYTN LAD+
Sbjct: 286 TRPQEALHYEFMQDYRVHVKHTDGSFEYVPYFCLPAKELNDVIAPSCYSCFDYTNGLADM 345
Query: 316 VVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVK 375
VVGYMGVP Y + M +HPQY+ VRNERG+E+L VK+ LE++PT+S GDRR VM+TV
Sbjct: 346 VVGYMGVP-YLDLDMIRHPQYLVVRNERGQELLDSVKHRLEMSPTVSMGDRRSVVMQTVA 404
Query: 376 ADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKK 435
+DD AK+G PAP+++GNL+A+ +NL+GPKGLEF +YS+DYH IRNYL+V+R WG K
Sbjct: 405 SDDQAKLGE-LRDPAPRWLGNLLAWLLNLIGPKGLEFGKYSIDYHYIRNYLYVHRNWGAK 463
Query: 436 RADKHMPSYAKKIVEMYNQNGQIDQMLSSK 465
RA++H+PS+ K+IV Y+++G + + L+ K
Sbjct: 464 RAEQHIPSFVKEIVRQYDKDGAVTKRLNLK 493
>gi|307102673|gb|EFN50942.1| hypothetical protein CHLNCDRAFT_55433 [Chlorella variabilis]
Length = 454
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 279/430 (64%), Positives = 338/430 (78%), Gaps = 11/430 (2%)
Query: 45 DWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRG 104
DWR +++PIP G +YPAK+HCS CGLCDTYYIAHVK+ACAFLGDGMS+I LE HGR
Sbjct: 18 DWRHKARPIPAGSSYPAKEHCSHCGLCDTYYIAHVKEACAFLGDGMSKIGQLEEQAHGRR 77
Query: 105 RRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDD 164
R + S D+ GV +++LYAR VEGAQWTGIVT IAIEML++G V+AVVCVQS DD
Sbjct: 78 RDQGSEDELRFGVTQQVLYARNAPAVEGAQWTGIVTQIAIEMLESGQVDAVVCVQSQEDD 137
Query: 165 RLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEH 224
R SP+P++AR+ E++LAA+GVKPTLSPNL+ LA VEA VKRLLF GVGCQVQALRS+E
Sbjct: 138 RFSPKPMVARSREDILAARGVKPTLSPNLSVLATVEALDVKRLLFIGVGCQVQALRSIEP 197
Query: 225 HLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFM---------QDYKVHLK 275
HL LEKLYVLGTNCVDNG R+GL+KFL AASS+P+TVLHYEFM DYKVH+K
Sbjct: 198 HLQLEKLYVLGTNCVDNGPRQGLEKFLNAASSDPDTVLHYEFMQARERQAAAADYKVHIK 257
Query: 276 HLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQ 335
H DG E +PYFCLPAN+L DVIAPSCYSCFDY NA ADLV+GYMGVP Y MT H Q
Sbjct: 258 HTDGSFEYIPYFCLPANELNDVIAPSCYSCFDYPNATADLVIGYMGVP-YQNTDMTSHLQ 316
Query: 336 YITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVG 395
Y+TVRN RG+E+L V++ L + P +SSG R FV++TV ADD AK+G+GP PAP++VG
Sbjct: 317 YLTVRNPRGQELLDSVRHRLVVEPPVSSGSRGAFVLQTVLADDQAKLGKGPD-PAPRWVG 375
Query: 396 NLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQN 455
NL+A+ + VGPKGLEFA+YS+DYH IRNY+HV R WG KRA +H+P +A++IV YN
Sbjct: 376 NLLAWVLERVGPKGLEFAKYSVDYHYIRNYIHVMRHWGPKRAAQHIPDFAQRIVAEYNPK 435
Query: 456 GQIDQMLSSK 465
G + + + K
Sbjct: 436 GMVSERAALK 445
>gi|159482986|ref|XP_001699546.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272813|gb|EDO98609.1| predicted protein [Chlamydomonas reinhardtii]
Length = 418
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 277/426 (65%), Positives = 339/426 (79%), Gaps = 13/426 (3%)
Query: 42 LREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVH 101
L DWR+R+KPI PG +YPAK+HCS CGLCDTYY+AHVKDACAFLG GMSRI+ LE VH
Sbjct: 1 LAPDWRERAKPIQPGSSYPAKEHCSNCGLCDTYYVAHVKDACAFLGPGMSRIDELEERVH 60
Query: 102 GRGRRKDSLDDTYLGVHEE--LLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQ 159
GR R +S D+ + GV + YA V GAQWTGIVT IAIEML++G V+AVVCVQ
Sbjct: 61 GRRRDVNSDDELHFGVTAPGGMAYAANVPGVPGAQWTGIVTQIAIEMLQSGKVDAVVCVQ 120
Query: 160 SDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQAL 219
SD +DR +P+PV+ART E+++ A+GVKPTLSPNLN LA VEA VK+LLF GVGCQVQAL
Sbjct: 121 SDENDRFTPKPVVARTVEDIIKARGVKPTLSPNLNVLATVEALQVKKLLFIGVGCQVQAL 180
Query: 220 RSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDG 279
RS+E HL LEKLYVLGTNCVDNG R+GLDKFLKAAS+ P+ LHYEFMQDY+
Sbjct: 181 RSIEPHLGLEKLYVLGTNCVDNGPRKGLDKFLKAASTRPDQALHYEFMQDYRWGY----- 235
Query: 280 HIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITV 339
VPYFCLPAN+L DVIAPSCYSCFDY NALAD+VVGYMGVP Y MT HPQY+ V
Sbjct: 236 ----VPYFCLPANELNDVIAPSCYSCFDYPNALADMVVGYMGVP-YLNKDMTSHPQYVVV 290
Query: 340 RNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIA 399
RN+RG E+L V++ L+ITPT+S+GDRR VM+TV +DD AKMG+ PAP+++GN++A
Sbjct: 291 RNDRGNELLDSVRHRLQITPTVSTGDRRGIVMQTVASDDEAKMGQ-LRDPAPRWLGNMLA 349
Query: 400 FFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQID 459
+ +NL+GPKGLEF +YS+DYH IRNYL+VNR WG KRA++H+PS+AKKIV+ Y+++G +
Sbjct: 350 WLLNLIGPKGLEFGKYSIDYHYIRNYLYVNRKWGAKRAEQHIPSFAKKIVQQYDKDGAVS 409
Query: 460 QMLSSK 465
+ +S K
Sbjct: 410 KRISLK 415
>gi|308805665|ref|XP_003080144.1| unnamed protein product [Ostreococcus tauri]
gi|116058604|emb|CAL54311.1| unnamed protein product [Ostreococcus tauri]
Length = 453
Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust.
Identities = 260/416 (62%), Positives = 325/416 (78%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K ++PI G TYPAK+HCS CGLCDT ++A V+DACAFLG GMSR+E LE VVHGRGRR
Sbjct: 34 KSARPIQNGSTYPAKEHCSECGLCDTEHVARVRDACAFLGQGMSRVETLEPVVHGRGRRA 93
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ LGV +E YA +PV+GAQWTG+VT++A ML++GMVE V+CV SDPD+ +
Sbjct: 94 SPDDEDRLGVVDETFYAAMKRPVDGAQWTGVVTSVAKRMLESGMVEGVICVASDPDEPRA 153
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
PRP+LA T EE+++A+GVKP+LSPNL+ L+ VEA G+KR+LF GVGC V ALR+VE +L
Sbjct: 154 PRPILATTVEEIVSARGVKPSLSPNLSVLSEVEARGLKRILFIGVGCAVSALRAVEPYLG 213
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
+KLYV+G NC DNG E KF++ +S P TVLHYEFM DY+VH KHLDG E+VPYF
Sbjct: 214 FDKLYVMGVNCTDNGRLESFQKFIQLSSENPGTVLHYEFMPDYQVHFKHLDGTYEKVPYF 273
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
CLPANDLVDVIAPSCYSCFDY N LAD+VVGYMG M +HPQY+TVRN RG+EM
Sbjct: 274 CLPANDLVDVIAPSCYSCFDYVNGLADVVVGYMGSEYDPSKPMNEHPQYVTVRNSRGREM 333
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
+ LV++ ++++P+ SSGDRRPFVM+TV ADD AK GRGP +PAP+FVG LIA+ + +GP
Sbjct: 334 IDLVRDDMDVSPSTSSGDRRPFVMQTVVADDEAKFGRGPEKPAPRFVGKLIAWLLTKIGP 393
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLS 463
KG EF YSLDYHTIRNYL+VNR WG +RA +H+P YAK++V Y+ NG + L+
Sbjct: 394 KGKEFGMYSLDYHTIRNYLYVNRVWGAERAREHVPEYAKRVVREYDVNGAVSARLN 449
>gi|303272651|ref|XP_003055687.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463661|gb|EEH60939.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 524
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 263/420 (62%), Positives = 323/420 (76%), Gaps = 14/420 (3%)
Query: 45 DWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRG 104
DWR+++KPI PG +YPAK+HCS CGLCDTYY+AHVKDACAFLGDGMS+IE LE VVHGR
Sbjct: 51 DWREKAKPIAPGSSYPAKEHCSNCGLCDTYYVAHVKDACAFLGDGMSKIETLEPVVHGRA 110
Query: 105 RRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDD 164
R S D++ LGV ++ YAR PV GAQWTG+VT+IAIEML +G V+ V+CV SD +
Sbjct: 111 RDLSS-DESRLGVARDVFYARMEAPVRGAQWTGVVTSIAIEMLASGKVDGVICVASDDAN 169
Query: 165 RLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEH 224
+ P+P+LA T EE+L+++GVKP LSPNL+ LA VEA G+K+LLF GVGC VQALRSVE
Sbjct: 170 PMLPKPILATTAEEILSSRGVKPALSPNLSVLAEVEARGIKKLLFVGVGCAVQALRSVEK 229
Query: 225 HLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 284
+L LE LYV+GTNC DNG +E L KFL AS +P+TV+HYEFMQDY ++V
Sbjct: 230 YLGLEALYVVGTNCTDNGRKETLSKFLDNASEDPKTVIHYEFMQDY-----------QKV 278
Query: 285 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 344
PYFCLPAN L DVIAPSCYSCFDY N LAD+VVGYMGVP + + MT HPQY+TVRNE+G
Sbjct: 279 PYFCLPANKLKDVIAPSCYSCFDYVNGLADIVVGYMGVP-WMNVDMTAHPQYVTVRNEKG 337
Query: 345 KEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINL 404
EM L++ +TP++SSGDRRPFVM+TV +DD A +GRGP +PAP VG IA+ +
Sbjct: 338 AEMFDLIRERAVVTPSVSSGDRRPFVMQTVISDDEATLGRGPEEPAPIAVGKAIAWLLEK 397
Query: 405 VGPKGLEFARYSLDYHTIRNYLHVNRAW-GKKRADKHMPSYAKKIVEMYNQNGQIDQMLS 463
+GPKG EF YSLDYHTIRNYLHV R + G+ RA H+P YA+ +V+ YN+NG ID L+
Sbjct: 398 IGPKGKEFGMYSLDYHTIRNYLHVKRRFGGEARAAAHVPKYARLVVDEYNENGAIDARLA 457
>gi|414869979|tpg|DAA48536.1| TPA: hypothetical protein ZEAMMB73_316791 [Zea mays]
Length = 310
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 260/304 (85%), Positives = 289/304 (95%)
Query: 161 DPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALR 220
DPDDRL+PRPVLARTP+EV+AAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALR
Sbjct: 4 DPDDRLAPRPVLARTPDEVIAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALR 63
Query: 221 SVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGH 280
SVE +L LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETV+HYEFMQDYKVHLKHLDGH
Sbjct: 64 SVEKYLGLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVMHYEFMQDYKVHLKHLDGH 123
Query: 281 IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVR 340
IEEVPYFCLPANDLVDVIAPSCYSCFDYTN LADLVVGYMGVPKY G+SMTQHPQYITVR
Sbjct: 124 IEEVPYFCLPANDLVDVIAPSCYSCFDYTNGLADLVVGYMGVPKYAGVSMTQHPQYITVR 183
Query: 341 NERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAF 400
N+RG+EML+LV LLE TPTISSG R+PFVMETVKADD AK+G+GPS+PAP+FVG+++AF
Sbjct: 184 NDRGQEMLNLVAGLLESTPTISSGSRQPFVMETVKADDAAKLGKGPSKPAPRFVGDILAF 243
Query: 401 FINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQ 460
+NLVGPKGLEFARYSLDYHTIRNYLHV RAWGK+RA++H+P YAKKIVE Y+++G+I+
Sbjct: 244 LLNLVGPKGLEFARYSLDYHTIRNYLHVRRAWGKQRAEQHIPGYAKKIVEAYDKDGRIEA 303
Query: 461 MLSS 464
M++
Sbjct: 304 MVTQ 307
>gi|145342511|ref|XP_001416225.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576450|gb|ABO94518.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 428
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 259/416 (62%), Positives = 317/416 (76%), Gaps = 13/416 (3%)
Query: 50 SKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDS 109
++PI PG YPAK+HCS CGLCDT ++A VK+ACAFLG G SRIE LE VVHGR R
Sbjct: 26 ARPIAPGSAYPAKEHCSECGLCDTAHVARVKEACAFLGPGQSRIETLEPVVHGRARSAAP 85
Query: 110 LDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPR 169
D++ LGV E Y PV+GAQWTGIVT++A+ L++G VE VVCV S DD +PR
Sbjct: 86 SDESRLGVALETFYGAMRTPVDGAQWTGIVTSVALAALRSGAVEGVVCVASREDDSRAPR 145
Query: 170 PVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLE 229
P+LA T EE+L+A+GVKP+LSPNL+ LA VEA G+KR+LF GVGC V ALR+VE HL L+
Sbjct: 146 PILATTEEEILSARGVKPSLSPNLSVLAEVEARGLKRVLFIGVGCAVSALRAVEPHLGLD 205
Query: 230 KLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCL 289
LYV+GTNC DNG EG +KF+ AAS +P+TV+HYEFMQDY +VPYFCL
Sbjct: 206 ALYVVGTNCTDNGRWEGFNKFIDAASDDPDTVMHYEFMQDY------------QVPYFCL 253
Query: 290 PANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 349
PA DL DVIAPSCYSCFDY N LAD+VVGYMGVP Y M +HPQY+TVRNERG+EM+
Sbjct: 254 PAKDLTDVIAPSCYSCFDYVNGLADVVVGYMGVP-YMDKPMDRHPQYVTVRNERGREMID 312
Query: 350 LVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKG 409
L++N +EITP+ SSGDRRPFVM+TV ADD AK+GRGP +PAP+ VG L+A+ + +GPKG
Sbjct: 313 LIRNDMEITPSTSSGDRRPFVMQTVVADDEAKLGRGPDKPAPRVVGKLLAWLLTKIGPKG 372
Query: 410 LEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSSK 465
EF YSLDYHTIRNY++VNRAWG KRA++H+P YAK++V Y+ +G I L K
Sbjct: 373 KEFGMYSLDYHTIRNYMYVNRAWGAKRAEEHVPEYAKRVVREYDVDGAISARLRLK 428
>gi|115457714|ref|NP_001052457.1| Os04g0320100 [Oryza sativa Japonica Group]
gi|113564028|dbj|BAF14371.1| Os04g0320100 [Oryza sativa Japonica Group]
Length = 327
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/311 (81%), Positives = 273/311 (87%), Gaps = 9/311 (2%)
Query: 11 SSLPLSISTICCSSSSSSSSSPSKDGSKSVK--------LREDWRKRSKPIPPGGTYPAK 62
SSLP + CCS SS SSPS + K LREDWR+RSK IPPGG YPAK
Sbjct: 12 SSLPCATKPPCCSVSSVLPSSPSSHQCRGRKTSCGSIRALREDWRERSKAIPPGGVYPAK 71
Query: 63 DHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
DHCS+CGLCDTYYIAHVK+ACAFLGDGMSR+E LE +VHGRGR++D +D+ Y GV+E+LL
Sbjct: 72 DHCSQCGLCDTYYIAHVKNACAFLGDGMSRVEDLEPLVHGRGRKQD-MDEMYFGVYEQLL 130
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
YARK KPVEGAQWTGIVTTIA+EMLK MV+AVVCVQSDPDDRL+P PVLARTP+EV+AA
Sbjct: 131 YARKMKPVEGAQWTGIVTTIAVEMLKANMVDAVVCVQSDPDDRLAPMPVLARTPDEVIAA 190
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNG 242
KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE +L LEKLYVLGTNCVDNG
Sbjct: 191 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEKYLGLEKLYVLGTNCVDNG 250
Query: 243 TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSC 302
TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPA DLVDVIAPSC
Sbjct: 251 TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAKDLVDVIAPSC 310
Query: 303 YSCFDYTNALA 313
YSCFDYTN LA
Sbjct: 311 YSCFDYTNGLA 321
>gi|412986215|emb|CCO17415.1| predicted protein [Bathycoccus prasinos]
Length = 480
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/431 (57%), Positives = 310/431 (71%), Gaps = 17/431 (3%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
++ +PI PG +YPAK+HCS CGLCDT I++VKDACAFLG GMSRIE LE VHG+ RR
Sbjct: 49 RKGQPIKPGQSYPAKEHCSNCGLCDTSLISYVKDACAFLGPGMSRIEKLEEKVHGK-RRN 107
Query: 108 DSLDDTYLGV-------------HEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEA 154
D+ LGV + + YA+K +P+E AQWTGIVT++A+EML+T V+
Sbjct: 108 TETDELRLGVLLNSDTKDNTNNSSQSIFYAKKKQPMEKAQWTGIVTSVALEMLRTKTVDC 167
Query: 155 VVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEA-AGVKRLLFCGVG 213
VV V S D +P P L T E++LA +GVKP+LSPNL A +E +K +L+ GVG
Sbjct: 168 VVAVGSGEADARNPEPKLCFTEEDILACRGVKPSLSPNLKVFAEIETNPEIKNVLYIGVG 227
Query: 214 CQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVH 273
C V ALR VE +L L+ LYVLGTNC DNG +G KF+ A+ +P+ VLHYEFM DYKVH
Sbjct: 228 CSVVALREVEQYLGLDNLYVLGTNCADNGRTDGFYKFVNNATDKPDEVLHYEFMPDYKVH 287
Query: 274 LKHLDGHIEEVPYFCLPANDLVD-VIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQ 332
LK DG E++PYF LPA +L VIA SC SCFDY N LADLVVGYMGV I M
Sbjct: 288 LKMRDGSYEKIPYFSLPAKELSSGVIAESCKSCFDYVNGLADLVVGYMGVDYDESIPMNL 347
Query: 333 HPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPK 392
HPQY+TVRNERG++M+ L+KN L+ITP+ + GDR+PFV++TV +DD A +GRGP + AP+
Sbjct: 348 HPQYVTVRNERGQKMVDLIKNDLQITPSTTRGDRKPFVLQTVISDDEAYLGRGPEKGAPR 407
Query: 393 FVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
FVGNLIA+ +N VGPKG EF YSLDYHTIRNYL+VNR +GK+RA +H+PSYA KIVE Y
Sbjct: 408 FVGNLIAWVLNKVGPKGKEFGMYSLDYHTIRNYLYVNRIYGKERAKEHIPSYAMKIVEEY 467
Query: 453 N-QNGQIDQML 462
+NG I + L
Sbjct: 468 EGKNGDISKRL 478
>gi|434397144|ref|YP_007131148.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Stanieria cyanosphaera PCC 7437]
gi|428268241|gb|AFZ34182.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Stanieria cyanosphaera PCC 7437]
Length = 398
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/406 (55%), Positives = 281/406 (69%), Gaps = 19/406 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYYI +VK+ACAFL ++ LE HGR R
Sbjct: 8 KKAKALKPGSLRPAKELCSECGLCDTYYIHYVKEACAFLN---QQVAELEAQAHGRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D DD Y GVH+E++ ARK +P+ GAQWTGIV+TIA EML G+VE VVCVQ+ +DR
Sbjct: 65 DHEDDWYFGVHQEMMAARKKQPIAGAQWTGIVSTIACEMLTRGLVEGVVCVQNTEEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P+PV+A TPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L
Sbjct: 125 PKPVIATTPEEILAARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEKELG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN +REGL KFL+ S PETV+HYEFMQD++VH KH DG IE+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVSREGLQKFLETTSKSPETVVHYEFMQDFRVHFKHEDGSIEKVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ GKEM
Sbjct: 245 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNQTGKEM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV++ L+ P +S GDR+ V +++ A D A P + ++ I +GP
Sbjct: 297 LELVQDQLDTEPVMSQGDRKQAVQQSIPAYDKAVT-------LPMWAAKMMGVVIEKIGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
KGLE+AR+S+D H RNYL+V R +K D H+P YAK+IV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYVKRHHPEK-LDAHVPEYAKRIVGQYQ 394
>gi|218437110|ref|YP_002375439.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Cyanothece sp. PCC 7424]
gi|218169838|gb|ACK68571.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. PCC 7424]
Length = 397
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/406 (55%), Positives = 281/406 (69%), Gaps = 19/406 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K I PG PAK+ CS CGLCDTYYI +VK+ACAFL ++ LE HGR R
Sbjct: 8 KKAKAIKPGSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQVAELEAQAHGRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D DD Y GVH+E++ A+K +P+EGAQWTGIV+TIA EML G+VE VVCVQ+ P+DR
Sbjct: 65 DRQDDWYFGVHQEMMAAKKKQPIEGAQWTGIVSTIACEMLTRGLVEGVVCVQNTPEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P+LA TPEE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L
Sbjct: 125 PMPILATTPEEILAAKVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEKELG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR+GL KFL+ S P+T++HYEFMQD++VH KH DG IE VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTRDGLQKFLETTSKSPDTIVHYEFMQDFRVHFKHEDGSIETVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC SCFDY N+LADLVVGYMG P Q++ VRN+ G+EM
Sbjct: 245 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWLVVRNDTGREM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV++ +E +SSGDRR V +++ A D P + L+ I +GP
Sbjct: 297 LDLVRDQIETQGVMSSGDRRQAVQQSIPAYDKGVT-------LPMWAAKLMGVVIERIGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
KGLE+AR+S+D H RNYL+V R + +K + H+P YAK+IV Y
Sbjct: 350 KGLEYARFSIDSHYTRNYLYVKRNYPEK-LEAHVPEYAKRIVGQYK 394
>gi|113474585|ref|YP_720646.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta-like protein
[Trichodesmium erythraeum IMS101]
gi|110165633|gb|ABG50173.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Trichodesmium erythraeum IMS101]
Length = 401
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/405 (55%), Positives = 282/405 (69%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYYI +VK+ACAFL + E LE HGR R
Sbjct: 12 KKAKALRPGARRPAKELCSECGLCDTYYIHYVKEACAFLN---QQFENLEMQTHGRIRNL 68
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+ ++TY GV+++++ +RK +P+EGAQWTGIV+TIA EML G+VE VVCVQ+ +DR
Sbjct: 69 EDENETYFGVYQDMIASRKKQPIEGAQWTGIVSTIACEMLNQGIVEGVVCVQNTKEDRFQ 128
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P PV+ARTPEEVLAAK KPTLSPNL+ L +E +G+K++L GVGCQ+QALR+VE L+
Sbjct: 129 PMPVIARTPEEVLAAKVNKPTLSPNLSVLEKIEKSGMKKILAIGVGCQIQALRAVEKKLD 188
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TREGL KFL+ S PETV+HYEFMQD++VH KH DG +E+VP+F
Sbjct: 189 LEKLYVLGTPCVDNVTREGLQKFLETTSKSPETVVHYEFMQDFRVHFKHEDGTVEKVPFF 248
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L L D+ APSC SCFDY N LADLVVGYMG T Q+ITVRNE GK+M
Sbjct: 249 GLNTKKLKDIFAPSCLSCFDYVNGLADLVVGYMGA--------TFGWQWITVRNETGKQM 300
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV N LE P +S GDR V +++ A D A P + L+ I +GP
Sbjct: 301 LDLVMNQLETQPLMSQGDRHQAVQQSIPAYDQAVT-------LPMWAAKLMGVVIEKIGP 353
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+ R+S+D H RNYL+V R + KK D H+P +AKKIVE Y
Sbjct: 354 KGLEYGRFSIDSHFTRNYLYVKRNYPKK-LDAHVPEFAKKIVEQY 397
>gi|428202925|ref|YP_007081514.1| coenzyme F420-reducing hydrogenase subunit beta [Pleurocapsa sp.
PCC 7327]
gi|427980357|gb|AFY77957.1| coenzyme F420-reducing hydrogenase, beta subunit [Pleurocapsa sp.
PCC 7327]
Length = 397
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/405 (55%), Positives = 280/405 (69%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K+++ + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HGR R
Sbjct: 8 KKARALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIAELEAEAHGRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ DD Y GVH++++ ARK +P+EGAQWTGIV+TIA EML G+VE VVC+Q+ +DR
Sbjct: 65 DNQDDWYFGVHQDMMAARKKQPIEGAQWTGIVSTIACEMLNRGIVEGVVCIQNTTEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P+PVLA+TPEEVLAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L
Sbjct: 125 PKPVLAKTPEEVLAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRTVEKELG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL S P+TV+HYEFMQD+KVH KH DG IE+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTRAGLQKFLDTTSKSPDTVVHYEFMQDFKVHFKHEDGSIEKVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRNE+G+EM
Sbjct: 245 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNEKGREM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L L + L+ P +S GDR+ V +++ A D P + L+ I +GP
Sbjct: 297 LELAREQLDTQPVMSKGDRKQAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL+V R + +K + H+P +AK+IV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYVKRNYPEK-LESHLPEFAKRIVGQY 393
>gi|307151243|ref|YP_003886627.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Cyanothece sp. PCC 7822]
gi|306981471|gb|ADN13352.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. PCC 7822]
Length = 397
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/406 (55%), Positives = 279/406 (68%), Gaps = 19/406 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYYI +VK+ACAFL ++ LE HGR R
Sbjct: 8 KKAKALKPGSRRPAKELCSECGLCDTYYIHYVKEACAFLNQ---QVAELEAAAHGRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+S DD Y GVH+E++ A+K +P+EGAQWTGIV+TIA EML GMVE VVCVQ+ +DR
Sbjct: 65 ESQDDWYFGVHQEMMAAKKKQPIEGAQWTGIVSTIACEMLTRGMVEGVVCVQNTKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P+LA TPE++LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L
Sbjct: 125 PMPILATTPEQILAARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEKQLG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN +REGL KFL+ S PETV+HYEFMQD++VH KH DG IE VP+F
Sbjct: 185 LEKLYVLGTPCVDNVSREGLQKFLETTSKSPETVVHYEFMQDFRVHFKHEDGSIETVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ G+EM
Sbjct: 245 GLKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGREM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV++ +E +SSGDRR V ++ A D P + L+ I +GP
Sbjct: 297 LDLVRDQIETQGVMSSGDRRQAVQNSIPAYDKGVT-------LPMWAAKLMGVVIERIGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
KGLE+AR+S+D H RNYL V R + +K A H+P YAK+IV Y
Sbjct: 350 KGLEYARFSIDSHYTRNYLFVKRNYPEKLA-AHVPEYAKRIVGQYK 394
>gi|22299388|ref|NP_682635.1| hypothetical protein tll1845 [Thermosynechococcus elongatus BP-1]
gi|22295571|dbj|BAC09397.1| tll1845 [Thermosynechococcus elongatus BP-1]
Length = 398
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/409 (55%), Positives = 282/409 (68%), Gaps = 19/409 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
+++ + PG PAK CS CGLCDTYYI +VK+ACAFL + E LE HGR R D
Sbjct: 9 KARALKPGSPRPAKTLCSECGLCDTYYIHYVKEACAFLN---QQFETLEQQSHGRARDLD 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+ D+ Y GVH+E++ ARKT+P+ GAQWTGIV+TIAI +L++G VE VVCVQ+ DR +P
Sbjct: 66 NWDECYFGVHQEMMAARKTEPIPGAQWTGIVSTIAIALLESGRVEGVVCVQNSQSDRFTP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
+PV+ART EE+LAA+ KPTLSPNL+ L VE AG+KRLL GVGCQ+QALR+V+ L L
Sbjct: 126 KPVIARTREEILAARVNKPTLSPNLSVLEQVEQAGLKRLLVIGVGCQIQALRAVQDKLGL 185
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
EKLYVLGT CVDN TR GL KFL+ S PETV++YEFMQD++VH KH DG E VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVIYYEFMQDFRVHFKHSDGSTETVPFFG 245
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L N L DV APSC SCFDY N LADLVVGYMG P Q++ VRNERG+EML
Sbjct: 246 LKTNQLKDVFAPSCMSCFDYVNGLADLVVGYMGAPLGW--------QWLVVRNERGQEML 297
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
LV++ LEI P S+GDR V +++ A D P + L+ I +GPK
Sbjct: 298 DLVRDQLEIQPVTSAGDRHAAVQQSIPAYDKGVT-------LPMWAAKLVGLVIERIGPK 350
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 457
GLE+AR+S+D H RNYL+V R + +K A H+P++AKKIV+ Y Q
Sbjct: 351 GLEYARFSIDSHFTRNYLYVRRNYPQKLA-AHVPAFAKKIVDQYQLPAQ 398
>gi|354566184|ref|ZP_08985357.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Fischerella sp. JSC-11]
gi|353546692|gb|EHC16140.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Fischerella sp. JSC-11]
Length = 399
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/406 (55%), Positives = 279/406 (68%), Gaps = 19/406 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ +++ LE H R R
Sbjct: 10 KKAKALKPGSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQVDELEAQTHTRSRDL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GVH+ ++ ARK +P+ GAQWTGIV+TIAIEML GMVE VVCVQ+ +DR
Sbjct: 67 DNADELYFGVHQSMMAARKQQPIPGAQWTGIVSTIAIEMLNRGMVEGVVCVQNTKEDRFG 126
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P PV+ARTPEE+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+QALR+VE L
Sbjct: 127 PMPVIARTPEEILAARVNKPTLSPNLSVLEQVEKSGMKRLLVIGVGCQIQALRTVEKQLG 186
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL+ S P+TV+HYEFMQD++VH KH DG E VP+F
Sbjct: 187 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPDTVVHYEFMQDFRVHFKHEDGSTETVPFF 246
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRNERG+EM
Sbjct: 247 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNERGREM 298
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LVK+ LE P +S GDR V +++ A D P + L+ I +GP
Sbjct: 299 LELVKDQLETQPVMSKGDRTAAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGP 351
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
KGLE+AR+S+D H RNYL+V R +K ++H+P YAK+IV Y
Sbjct: 352 KGLEYARFSIDSHFTRNYLYVKRNHPEK-LEEHVPEYAKRIVGQYK 396
>gi|443478994|ref|ZP_21068668.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Pseudanabaena biceps PCC 7429]
gi|443015623|gb|ELS30495.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Pseudanabaena biceps PCC 7429]
Length = 398
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/406 (54%), Positives = 284/406 (69%), Gaps = 19/406 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+R+K + PAK+ CS CGLCDT+YI +VKDACAF+ I+ LET HGR R
Sbjct: 8 RRAKGLADTQRRPAKELCSECGLCDTHYIHYVKDACAFI---TQHIDELETQSHGRSRHL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ + Y GVH+E++ ARKT+P+EGAQWTGIV+++AI ML+ G+VE V+CVQS DR +
Sbjct: 65 DNEQELYFGVHQEMVAARKTEPIEGAQWTGIVSSLAIAMLERGLVEGVICVQSSTSDRFT 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P+PV+AR EE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L
Sbjct: 125 PQPVIARNREEILAARVNKPTLSPNLSVLEQIEQSGMKRLLAIGVGCQIQALRTVESKLG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT C DN TR GL KFL S PETV+HYEFMQD+ VH KH DG E+VP+F
Sbjct: 185 LEKLYVLGTPCTDNVTRSGLQKFLDTTSRSPETVVHYEFMQDFNVHFKHSDGSTEQVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L +L DV APSC +CFDYTNALAD+VVGYMG T Q+I VRNE GKEM
Sbjct: 245 GLNTKELKDVFAPSCMTCFDYTNALADIVVGYMGA--------TFGWQWIVVRNETGKEM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L L+K+ L++ P IS GDRR V + + A DNA P ++ +I+F +N VGP
Sbjct: 297 LELIKDQLQVQPVISQGDRRAAVQQGISAYDNA-------MTLPIWLAWIISFVVNKVGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
KGLE+ R+S+D H +RN+L+V R + KK + H+P +AK+IV Y
Sbjct: 350 KGLEYGRFSIDSHFVRNFLYVRRNYPKK-LEAHVPEFAKRIVAHYQ 394
>gi|332710426|ref|ZP_08430373.1| coenzyme F420-reducing hydrogenase, beta subunit [Moorea producens
3L]
gi|332350757|gb|EGJ30350.1| coenzyme F420-reducing hydrogenase, beta subunit [Moorea producens
3L]
Length = 401
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/405 (55%), Positives = 282/405 (69%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K+++ + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LET HGR R
Sbjct: 12 KKARALKPSSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLETKAHGRSRNL 68
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D DD Y GV++++L A+K KP+EGAQWTGIV+TIA+EMLK G VE VVCVQ+ +DR
Sbjct: 69 DHPDDWYFGVNQKMLTAKKIKPIEGAQWTGIVSTIAMEMLKQGKVEGVVCVQNTEEDRFQ 128
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P++ARTPEEVLAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+QALRSV++ L
Sbjct: 129 PMPIIARTPEEVLAARVNKPTLSPNLSVLEQVEQSGMKRLLVIGVGCQIQALRSVQNELG 188
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN REGL KFL+ S PETV+HYEFMQD+++H KH DG IE+VP+F
Sbjct: 189 LEKLYVLGTPCVDNVNREGLQKFLETTSRSPETVVHYEFMQDFRIHFKHEDGSIEKVPFF 248
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV A SC SCFDY N+LADLVVGYMG P Q+I VRN+ G+EM
Sbjct: 249 GLKTNQLKDVFASSCMSCFDYVNSLADLVVGYMGAPFGW--------QWILVRNDIGQEM 300
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV++ LE P +S GDR+ V +++ A D P + ++ I +GP
Sbjct: 301 LDLVQDQLETQPVMSKGDRKQAVQQSIPAYDKGVT-------LPMWAAKMMGVVIEKIGP 353
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL++ R +K + H+P YAK+IVE Y
Sbjct: 354 KGLEYARFSIDSHFTRNYLYLKRNHPQK-LEAHVPEYAKRIVEQY 397
>gi|440684233|ref|YP_007159028.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Anabaena cylindrica PCC 7122]
gi|428681352|gb|AFZ60118.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Anabaena cylindrica PCC 7122]
Length = 397
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/409 (54%), Positives = 284/409 (69%), Gaps = 21/409 (5%)
Query: 45 DWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRG 104
D K++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ RI+ LET H R
Sbjct: 5 DSHKKAKALKPGSVRPAKELCSECGLCDTYYIHYVKEACAFI---TQRIDELETTTHNRP 61
Query: 105 RRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDD 164
R ++ Y GVH+E++ ARK +P+EGAQWTGIV++IAIEML G+VE VVCVQ+ +D
Sbjct: 62 RNLKDENELYFGVHQEMMSARKQEPIEGAQWTGIVSSIAIEMLNRGLVEGVVCVQNTKED 121
Query: 165 RLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEH 224
R P P++ARTP E+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE
Sbjct: 122 RFQPMPIIARTPAEILAAKVNKPTLSPNLSVLEQIEKSGMKRLLVIGVGCQIQALRAVEK 181
Query: 225 HLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 284
L LEKLYVLGT CVDN TR GL KFL+ S PETV+ YEFMQD++VH KH DG E V
Sbjct: 182 KLGLEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVSYEFMQDFRVHFKHEDGSEETV 241
Query: 285 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP-KYTGISMTQHPQYITVRNER 343
P+F L N L D+ APSC SCFDY N+LAD+VVGYMG P K+ Q+I VRN+
Sbjct: 242 PFFGLKTNVLKDIFAPSCMSCFDYVNSLADIVVGYMGAPFKW---------QWIVVRNDT 292
Query: 344 GKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFIN 403
GKEML LVK+ ++ P +S GDR+P V +++ A D A P + L+ I+
Sbjct: 293 GKEMLELVKDQIDTQPVMSKGDRKPAVQQSIPAYDQAVT-------LPMWAAKLMGVVID 345
Query: 404 LVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
+GPKGLE+AR+S+D H RNYL+V R G+K + H+P +AK+IV Y
Sbjct: 346 KIGPKGLEYARFSIDSHFARNYLYVKRNHGEK-LEAHVPEFAKRIVGQY 393
>gi|414079287|ref|YP_007000711.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Anabaena sp.
90]
gi|413972566|gb|AFW96654.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit [Anabaena sp.
90]
Length = 397
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/405 (54%), Positives = 281/405 (69%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ RI+ LET H R R
Sbjct: 8 KKAKALKPGSVRPAKELCSECGLCDTYYIHYVKEACAFI---TQRIDELETTTHNRPRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+ ++ Y GVH+E++ ARK +P+EGAQWTGIV++IAIEML G+VE VVCVQ+ +DR
Sbjct: 65 EDENELYFGVHQEMMSARKQQPIEGAQWTGIVSSIAIEMLNRGLVEGVVCVQNSKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P++ARTPEE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L
Sbjct: 125 PMPIIARTPEEILAAKVNKPTLSPNLSVLEQIEKSGMKRLLVIGVGCQIQALRAVEKKLG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL+ S P+TV+ YEFMQD++VH KH DG E VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPQTVVSYEFMQDFRVHFKHEDGSEETVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L D+ APSC SCFDY N+LAD+VVGYMG P Q+I VRN+ GKEM
Sbjct: 245 GLKTNVLKDIFAPSCMSCFDYVNSLADIVVGYMGAP--------YQWQWIVVRNDTGKEM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LVK+ L P S G+R+P V +++ A D A P + L+ I+ +GP
Sbjct: 297 LELVKDQLHTQPVTSQGNRKPAVQQSIPAYDQAVT-------LPMWAAKLMGVVIDKIGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL+V R G+K + H+P +AK+IV Y
Sbjct: 350 KGLEYARFSIDSHFARNYLYVKRNHGEK-LEAHVPEFAKRIVGQY 393
>gi|427731855|ref|YP_007078092.1| coenzyme F420-reducing hydrogenase subunit beta [Nostoc sp. PCC
7524]
gi|427367774|gb|AFY50495.1| coenzyme F420-reducing hydrogenase, beta subunit [Nostoc sp. PCC
7524]
Length = 397
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/405 (54%), Positives = 283/405 (69%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + G PAK+ CS CGLCDTYYI +VK+ACAF+ +I+ LE H R R
Sbjct: 8 QKAKALKAGSRRPAKELCSECGLCDTYYIHYVKEACAFI---TQQIDTLEEQTHTRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GVH++++ ARK +P+EGAQWTGIV+TIAIEML G+VE VVCVQ+ +DR
Sbjct: 65 DNPDELYFGVHQDMIAARKQQPIEGAQWTGIVSTIAIEMLNRGLVEGVVCVQNSKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P PV+ARTPEE+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+QALR+VE L
Sbjct: 125 PMPVIARTPEEILAARVNKPTLSPNLSILEQVEQSGMKRLLVIGVGCQIQALRAVEKKLG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD+++H KH DG IE+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVHYEFMQDFRIHFKHEDGSIEKVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L D+ APSC SCFDY N+LADLVVGYMG P Q+I VRN+ GKEM
Sbjct: 245 GLKTNQLKDIFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LVK+ L+ P +S G+R+ V + + A D P +V L+ I+ +GP
Sbjct: 297 LDLVKDQLDTQPVMSEGNRKEAVQQGIPAYDKGVT-------LPMWVAKLMGVVIDKIGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL V R +G+K + H+P +AK+IV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLFVKRNYGEK-LEAHVPEFAKRIVGQY 393
>gi|443325346|ref|ZP_21054045.1| coenzyme F420-reducing hydrogenase, beta subunit [Xenococcus sp.
PCC 7305]
gi|442795030|gb|ELS04418.1| coenzyme F420-reducing hydrogenase, beta subunit [Xenococcus sp.
PCC 7305]
Length = 397
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/406 (54%), Positives = 282/406 (69%), Gaps = 19/406 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + G PAK+ CS CGLCDTYYI +VK+ACAFL ++ LE HGR R
Sbjct: 8 KKAKALKTGSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQVAALEEQAHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D +D Y GVH+E++ ARK +P+EGAQWTGIV+++A ML+ G+VE VVCVQ+ +DR
Sbjct: 65 DQENDIYFGVHQEMMAARKKEPIEGAQWTGIVSSLACTMLRRGLVEGVVCVQNTKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P++ARTPEEVLAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L
Sbjct: 125 PFPIIARTPEEVLAAKVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEAELG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN +REGL KFL S PETV+HYEFMQD++VH KH DG +E+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVSREGLQKFLDTTSRSPETVVHYEFMQDFRVHFKHQDGSVEKVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC SCFDY N+LAD+VVGYMG P Q+I VRN+ GKEM
Sbjct: 245 GLKTNKLKDVFAPSCMSCFDYVNSLADIVVGYMGAPFGW--------QWIVVRNDTGKEM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
LSL+++ ++ P +S GDR+ V +++ A D P + ++ I +GP
Sbjct: 297 LSLIQDQIDTQPVMSKGDRKQAVQQSIPAYDKGVT-------LPMWAAKMMGVVIEKIGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
KGLE+AR+S+D H RNYL++ R +K AD H+P YA+KIVE Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYLKRNHPEKLAD-HVPDYARKIVEQYE 394
>gi|428303898|ref|YP_007140723.1| coenzyme F420 hydrogenase [Crinalium epipsammum PCC 9333]
gi|428245433|gb|AFZ11213.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Crinalium epipsammum PCC 9333]
Length = 401
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/405 (55%), Positives = 280/405 (69%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + P PAK+ CS CGLCDTYYI +VK+ACAF+ +I LE HGR R
Sbjct: 8 QKAKALKPSSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQITELEEETHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ DD Y GV+++++ ARKT+P+EGAQWTGIV++IAIEML +GMVE VVCVQ+ +DR
Sbjct: 65 DNPDDWYFGVNQDMMAARKTEPIEGAQWTGIVSSIAIEMLNSGMVEGVVCVQNTKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P PV+ARTPEE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L
Sbjct: 125 PMPVIARTPEEILAAKVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEKKLG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN R GL KFL+ S PETV+HYEFMQD++VH KH DG +E VP+F
Sbjct: 185 LEKLYVLGTPCVDNVNRAGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSVEMVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ G+EM
Sbjct: 245 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGQEM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LVK+ LE P S GDR+ V +++ A D P + L+ I +GP
Sbjct: 297 LDLVKDQLETQPVTSKGDRKEAVQQSIPAYDKGVT-------LPMWAAKLMGVVIERIGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNY+++ R +K D H+P YAK+IV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYIYLKRNHPEK-LDAHVPEYAKRIVGQY 393
>gi|172039575|ref|YP_001806076.1| hypothetical protein cce_4662 [Cyanothece sp. ATCC 51142]
gi|354552165|ref|ZP_08971473.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. ATCC 51472]
gi|171701029|gb|ACB54010.1| unknown [Cyanothece sp. ATCC 51142]
gi|353555487|gb|EHC24875.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. ATCC 51472]
Length = 398
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/405 (55%), Positives = 279/405 (68%), Gaps = 19/405 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + PG PAK+ CS CGLCDTYYI +VK+ACAFL +I LET+ HG+ R +
Sbjct: 9 KAKALKPGSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIAELETIAHGKSRNLE 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ ARK P+EGAQWTGIV+TIA EML+ G+VE VVCVQ+ +DR P
Sbjct: 66 DENDCYFGVHQEMMAARKKDPIEGAQWTGIVSTIACEMLEKGLVEGVVCVQNTKEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
PV+ART EEVLAA+ KPTLSPNL+ L +E + +KRLL GVGCQ+QALR+VE L L
Sbjct: 126 MPVIARTSEEVLAARVNKPTLSPNLSILEQIEKSNLKRLLVIGVGCQIQALRAVEKELGL 185
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
EKLYVLGT CVDN TREGL KFL+ S P+TV+HYEFMQD++VH KH DG +E+VP+F
Sbjct: 186 EKLYVLGTPCVDNVTREGLQKFLETTSQSPDTVVHYEFMQDFRVHFKHEDGSVEKVPFFG 245
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L N L DV APSC SCFDY N+LADLVVGYMG Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAEFGW--------QWIMVRNDTGKEML 297
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
SLV++ + P IS GDR+ V +++ A D P + L+ I VGPK
Sbjct: 298 SLVEDQINTKPVISQGDRKQAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKVGPK 350
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
GLE+AR+S+D H RNYL+V R +K D H+P YAKKIV Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNHPEK-LDNHVPDYAKKIVSQYQ 394
>gi|209524048|ref|ZP_03272599.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Arthrospira maxima CS-328]
gi|376004211|ref|ZP_09781958.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain
containing protein [Arthrospira sp. PCC 8005]
gi|209495423|gb|EDZ95727.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Arthrospira maxima CS-328]
gi|375327417|emb|CCE17711.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain
containing protein [Arthrospira sp. PCC 8005]
Length = 400
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/405 (54%), Positives = 280/405 (69%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + PG PAK CS CGLCDTYYI +VK+ACAFL + +I LE HGR R
Sbjct: 11 QKAKALKPGSRRPAKALCSECGLCDTYYIHYVKEACAFLNE---QIANLEEQAHGRSRNL 67
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ DD Y GVH++++ ARK +P+ GAQWTGIV+TIA EML G+VE VVCVQ+ +DR
Sbjct: 68 DNSDDLYFGVHQDMMAARKKEPIPGAQWTGIVSTIACEMLNQGIVEGVVCVQNTKEDRFG 127
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P+LARTPEEVLAA+ KPTLSPNL+ L VE +G+K+LL GVGCQ+QALR+VE +
Sbjct: 128 PMPILARTPEEVLAARVNKPTLSPNLSVLEEVERSGMKKLLVIGVGCQIQALRAVEKQMG 187
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG E VP+F
Sbjct: 188 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSTETVPFF 247
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L D+ APSC SCFDY N+LADLVVGYMG P Q+I VRN+RG+EM
Sbjct: 248 GLKTNQLKDIFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDRGQEM 299
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L L+++ L+ P S GDRR V +++ A D A P + ++ I +GP
Sbjct: 300 LDLIQDQLDTQPVSSQGDRRAAVQQSIPAYDKAVT-------IPMWAAKMMGVVIERIGP 352
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL+V R + +K + H+P +AK+IV Y
Sbjct: 353 KGLEYARFSIDSHYTRNYLYVKRNYPEK-LENHVPDFAKRIVAQY 396
>gi|409991447|ref|ZP_11274708.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Arthrospira platensis str.
Paraca]
gi|291566576|dbj|BAI88848.1| 3,8-divinyl protochlorophyllide/chlorophyllide reductase
[Arthrospira platensis NIES-39]
gi|409937698|gb|EKN79101.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Arthrospira platensis str.
Paraca]
Length = 400
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/405 (54%), Positives = 279/405 (68%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + PG PAK CS CGLCDTYYI +VK+ACAFL + +I LE HGR R
Sbjct: 11 QKAKALKPGSRRPAKALCSECGLCDTYYIHYVKEACAFLNE---QIANLEEQAHGRSRNL 67
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ DD Y GVH++++ ARK +P+ GAQWTGIV+TIA EML G+VE VVCVQ+ +DR
Sbjct: 68 DNSDDLYFGVHQDMMAARKKEPIPGAQWTGIVSTIACEMLNQGIVEGVVCVQNTKEDRFG 127
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P PVLARTPEEVLAA+ KPTLSPNL+ L VE +G+K+LL GVGCQ+QALR+VE +
Sbjct: 128 PMPVLARTPEEVLAARVNKPTLSPNLSVLEEVERSGMKKLLVIGVGCQIQALRAVEKQMG 187
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG E VP+F
Sbjct: 188 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSTETVPFF 247
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L D+ APSC SCFDY N+LADLVVGYMG P Q+I VRN+RG+EM
Sbjct: 248 GLKTNQLKDIFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDRGQEM 299
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L L+++ L+ P S GDR V +++ A D A P + ++ I +GP
Sbjct: 300 LDLIQDQLDTQPVSSKGDRHQAVQQSIPAYDKAVT-------IPMWAAKMMGVVIERIGP 352
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL+V R + +K D H+P +AK+IV Y
Sbjct: 353 KGLEYARFSIDSHYTRNYLYVKRNYPEK-LDNHVPDFAKRIVAQY 396
>gi|428206145|ref|YP_007090498.1| coenzyme F420 hydrogenase [Chroococcidiopsis thermalis PCC 7203]
gi|428008066|gb|AFY86629.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chroococcidiopsis thermalis PCC 7203]
Length = 398
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/405 (54%), Positives = 280/405 (69%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + G PAK+ CS CGLCDTYYI +VK+ACAFL + + LET H R R
Sbjct: 9 KKAKALKSGSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQFDQLETQTHDRSRNL 65
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GVH+ + ARK +P+ GAQWTGIV+TIAIEML G+VE VVCVQ+ +DR
Sbjct: 66 DNPDELYFGVHQSMTAARKKEPIPGAQWTGIVSTIAIEMLNRGIVEGVVCVQNTKEDRFQ 125
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P++ARTPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L
Sbjct: 126 PMPIIARTPEEILAARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEKQLG 185
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL+ S P+TV+HYEFMQD++VH KH DG +E VP+F
Sbjct: 186 LEKLYVLGTPCVDNVTRAGLQKFLETTSKSPDTVVHYEFMQDFRVHFKHEDGSVETVPFF 245
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC SCFDY N+LADLVVGYMG T Q+I VRN+RG+EM
Sbjct: 246 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGA--------TFGWQWIVVRNDRGREM 297
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV++ LE+ P IS GDR V +++ A D A P + L+ I +GP
Sbjct: 298 LDLVQDKLELQPVISQGDRHQAVQQSIPAYDKAVT-------LPMWAAKLMGVVIERIGP 350
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL+V R + +K + H+P +AK+IV Y
Sbjct: 351 KGLEYARFSIDSHFTRNYLYVKRNYLEK-LEAHVPEFAKRIVGQY 394
>gi|428223919|ref|YP_007108016.1| coenzyme F420 hydrogenase [Geitlerinema sp. PCC 7407]
gi|427983820|gb|AFY64964.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Geitlerinema sp. PCC 7407]
Length = 398
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/406 (54%), Positives = 280/406 (68%), Gaps = 19/406 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HGR R
Sbjct: 8 KKAKALKSSSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAEAHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+ DD Y GVH+ ++ ARK +P+EGAQWTGIV+++AIEML G VE VVCVQ+ DR
Sbjct: 65 EQWDDCYFGVHQTMMAARKQQPIEGAQWTGIVSSLAIEMLNRGWVEGVVCVQNTESDRFG 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P+PV+ARTPEE+LAA+ KPTLSPNL+ L LVE +G+K+LL GVGCQ+QALR+V+ L
Sbjct: 125 PQPVIARTPEEILAARVNKPTLSPNLSVLELVEQSGLKKLLVIGVGCQIQALRAVQDKLG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN +R+GL KFL+ S PETV+HYEFMQD++VH KH DG IE+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVSRDGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSIEKVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L +L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+RG+EM
Sbjct: 245 GLNTKELKDVFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDRGQEM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV + LE P +S GDRR V +++ A + P + L+ I +GP
Sbjct: 297 LDLVMDQLETQPVMSKGDRRAAVQQSIPAYEKGVT-------LPMWAAQLMGVVIEKIGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
KGLE+AR+S+D H RNYL+V R +K AD H+P YA++IV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYVQRNHPEKLAD-HVPDYAQRIVGQYQ 394
>gi|428775162|ref|YP_007166949.1| coenzyme F420 hydrogenase [Halothece sp. PCC 7418]
gi|428689441|gb|AFZ42735.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Halothece sp. PCC 7418]
Length = 398
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/406 (55%), Positives = 280/406 (68%), Gaps = 19/406 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + G PAK CS CGLCDTYYI +VK+ACAFL + +I LE HG+ R
Sbjct: 8 RKAKALKAGSPRPAKALCSECGLCDTYYIHYVKEACAFLHE---QIADLEAQAHGQSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+ DD Y GVH+E++ ARK +P+EGAQWTGIV+ IA EML+ G VE VVCVQ+ P+DR
Sbjct: 65 EKEDDLYFGVHQEMMAARKKEPIEGAQWTGIVSAIACEMLQQGKVEGVVCVQNTPEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P++ARTPEEVLAA+ KPTLSPNL+ L VE +G KRLL GVGCQ+QALR+V+ L
Sbjct: 125 PMPIIARTPEEVLAARVNKPTLSPNLSILEEVEQSGFKRLLVIGVGCQIQALRAVQDKLG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TREGL KFL+ S PETV+HYEFMQD++VH KH DG IE+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTREGLQKFLETTSKSPETVVHYEFMQDFRVHFKHEDGSIEKVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L +L DV APSC SCFDY N+LADLVVGYMG P G Q+I VRN+ GKEM
Sbjct: 245 GLNTKELKDVFAPSCMSCFDYVNSLADLVVGYMGAP--FGY------QWIVVRNDIGKEM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV++ LE S G+R+ V +++ A D P + L+ I VGP
Sbjct: 297 LDLVQDQLETQAVSSKGNRKAAVQQSIPAYDQGVT-------LPMWAAKLMGVVIEQVGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
KGLE+AR+S+D H RNYL+V R + +K D H+P YAK+IVE Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYVKRNYPEK-LDDHVPEYAKRIVEQYE 394
>gi|427736999|ref|YP_007056543.1| coenzyme F420-reducing hydrogenase subunit beta [Rivularia sp. PCC
7116]
gi|427372040|gb|AFY55996.1| coenzyme F420-reducing hydrogenase, beta subunit [Rivularia sp. PCC
7116]
Length = 397
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/405 (54%), Positives = 278/405 (68%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYY+ +VK+ACAFL +I LE H R R
Sbjct: 8 KKAKALKPGSPRPAKELCSECGLCDTYYVHYVKEACAFLN---QQIAELEEQSHSRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GV +E++ ARK +P+ GAQWTGIV++IAIEML G+VE VVCVQ+ +DR
Sbjct: 65 DNADELYFGVQQEMMAARKKEPIPGAQWTGIVSSIAIEMLNRGIVEGVVCVQNTQEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P PV+ARTPEEVLAAK KPTLSPNL+ L VE +G+KRLL GVGCQ+QALR+VE L
Sbjct: 125 PMPVIARTPEEVLAAKVNKPTLSPNLSVLEQVEKSGMKRLLVIGVGCQIQALRAVEKQLG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL+ S P+TV+HYEFMQD++VH KH DG E VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTRAGLQKFLETTSKSPDTVVHYEFMQDFRVHFKHEDGSTETVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC SCFDY N+LAD+VVGYMG P Q+I VRNERGKEM
Sbjct: 245 GLKTNKLKDVFAPSCMSCFDYVNSLADIVVGYMGAPFGW--------QWIVVRNERGKEM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LVK+ +++ +S G+R+ V +++ A D P + L+ I +GP
Sbjct: 297 LDLVKDQIDVQEVMSQGNRQAAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL+ R +K D H+P +AK+IVE Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYTKRNHPEK-LDNHVPEFAKRIVEQY 393
>gi|428314173|ref|YP_007125150.1| coenzyme F420-reducing hydrogenase subunit beta [Microcoleus sp.
PCC 7113]
gi|428255785|gb|AFZ21744.1| coenzyme F420-reducing hydrogenase, beta subunit [Microcoleus sp.
PCC 7113]
Length = 402
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/393 (56%), Positives = 274/393 (69%), Gaps = 19/393 (4%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HGR R D+ DD Y GV++
Sbjct: 24 PAKELCSECGLCDTYYIHYVKEACAFLN---QQIAELEEEAHGRSRHLDNPDDWYFGVNQ 80
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEV 179
++ ARKT+P+EGAQWTGIV+TIAIEML G+VE VVCVQ+ +DR P P++ARTPEE+
Sbjct: 81 NMMAARKTEPIEGAQWTGIVSTIAIEMLNRGIVEGVVCVQNTKEDRFQPMPIIARTPEEI 140
Query: 180 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCV 239
LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L LEKLYVLGT CV
Sbjct: 141 LAARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEKQLGLEKLYVLGTPCV 200
Query: 240 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIA 299
DN TR+GL KFL S PETV+HYEFMQD++VH KH DG E VP+F L N L DV A
Sbjct: 201 DNVTRDGLQKFLDTTSRSPETVVHYEFMQDFRVHFKHEDGSTETVPFFGLKTNQLKDVFA 260
Query: 300 PSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITP 359
PSC SCFDY N+LADLVVGYMG P Q+I VRN+ G+EML LV+N LE P
Sbjct: 261 PSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGQEMLDLVQNQLETQP 312
Query: 360 TISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDY 419
+S GDRR V +++ A D P + L+ I +GP+GLE+AR+S+D
Sbjct: 313 VMSKGDRRNAVQQSIPAYDKGVT-------LPMWAAKLMGVVIERIGPQGLEYARFSIDS 365
Query: 420 HTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
H RNYL+V R +K ++H+P YAK+IV Y
Sbjct: 366 HFTRNYLYVKRNHPEK-LEEHVPEYAKRIVGQY 397
>gi|282898594|ref|ZP_06306582.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Cylindrospermopsis raciborskii CS-505]
gi|281196462|gb|EFA71371.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Cylindrospermopsis raciborskii CS-505]
Length = 401
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/407 (55%), Positives = 282/407 (69%), Gaps = 21/407 (5%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K+SK + PG PAK+ CS CGLCDTYYI +VK+ACAF+ RIE LE H R R
Sbjct: 10 KKSKALKPGSRRPAKELCSECGLCDTYYIHYVKEACAFI---TQRIEELEVNTHQRCRDL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D ++ Y GVH+E++ ARK P+ GAQWTGIV+TIAIEML G+VE VVCVQ+ +DR
Sbjct: 67 DKENELYFGVHQEMMAARKQVPIVGAQWTGIVSTIAIEMLNRGLVEGVVCVQNSQEDRFQ 126
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P++ARTPE +LAAK KPTLSPNL+ L +E +G+K+LL GVGCQ+QALR+VE L
Sbjct: 127 PMPIIARTPEAILAAKVNKPTLSPNLSVLEEIEQSGMKKLLVIGVGCQIQALRAVEKQLG 186
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL+ S P TV+ YEFMQD++VH KH DG E+VP+F
Sbjct: 187 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPGTVVSYEFMQDFRVHFKHEDGSEEKVPFF 246
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP-QYITVRNERGKE 346
L N L D+ APSC SCFDY N+LADLVVGYMG P +P Q+I VRN+ GK+
Sbjct: 247 GLKTNILKDIFAPSCMSCFDYVNSLADLVVGYMGAP---------YPWQWIVVRNDTGKQ 297
Query: 347 MLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVG 406
ML LVK LEI P +S G+R+P V + +KA D+A P +V L+ I+ +G
Sbjct: 298 MLDLVKEQLEIQPVMSQGNRQPAVQQGIKAYDDAVT-------LPMWVAQLMGIVIDRIG 350
Query: 407 PKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
PKGLE+ ++S+D H RNYL+V R +K + H+P +AK+IV YN
Sbjct: 351 PKGLEYGKFSIDSHFARNYLYVKRHHPQK-LEAHVPEFAKRIVAQYN 396
>gi|218246210|ref|YP_002371581.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Cyanothece sp. PCC 8801]
gi|257059259|ref|YP_003137147.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Cyanothece sp. PCC 8802]
gi|218166688|gb|ACK65425.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. PCC 8801]
gi|256589425|gb|ACV00312.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. PCC 8802]
Length = 401
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/405 (54%), Positives = 278/405 (68%), Gaps = 19/405 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + PG PAK+ CS CGLCDTYYI +VK+ACAFL +S LE + HGR R D
Sbjct: 12 KAKGLKPGSRRPAKELCSECGLCDTYYIHYVKEACAFLNQQISE---LEEIAHGRSRNLD 68
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GV++++ ARK +P+EGAQWTGIV+ IA EML G+VE VVCVQ+ P+DR P
Sbjct: 69 DENDWYFGVYQQMTAARKKQPIEGAQWTGIVSAIACEMLTQGLVEGVVCVQNTPEDRFQP 128
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
P++A+T EE+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+QALR+VE L L
Sbjct: 129 MPIIAKTTEEILAARVNKPTLSPNLSILEQVEQSGMKRLLVIGVGCQIQALRAVEKKLGL 188
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
EKLY+LGT CVDN TREGL FL+ S PETV+HYEFMQD++VH KH DG IE+VP+F
Sbjct: 189 EKLYILGTPCVDNVTREGLQTFLQTTSKSPETVIHYEFMQDFRVHFKHEDGSIEKVPFFG 248
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L N L DV APSC SCFDY N+LADLVVGYMG Q+I VRNE G+EML
Sbjct: 249 LKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAEFGW--------QWIMVRNETGREML 300
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
+LV+ ++ P IS GDR+ V +++ A D P + L+ I +GPK
Sbjct: 301 ALVEEQIDTKPVISQGDRKQAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGPK 353
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
GLE+AR+S+D H RNYL++ R +K AD H+P YAK+IV Y
Sbjct: 354 GLEYARFSIDSHFTRNYLYLKRNHPEKLAD-HVPEYAKRIVNQYQ 397
>gi|427711257|ref|YP_007059881.1| coenzyme F420-reducing hydrogenase subunit beta [Synechococcus sp.
PCC 6312]
gi|427375386|gb|AFY59338.1| coenzyme F420-reducing hydrogenase, beta subunit [Synechococcus sp.
PCC 6312]
Length = 404
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/405 (54%), Positives = 277/405 (68%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K I PAK+ CS CGLCDTYYI +VK+ACAF+ + + LET HGR R
Sbjct: 14 KKAKAIAANSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQFDTLETQTHGRSRDL 70
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GVH+E++ ARKT P+ GAQWTGIV++IAI ML G VE VVCVQ+ P+DR
Sbjct: 71 DNWDECYFGVHQEMITARKTDPIPGAQWTGIVSSIAIAMLNQGWVEGVVCVQNTPEDRFQ 130
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
PRP++ARTP E+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L
Sbjct: 131 PRPIIARTPAEILAARVNKPTLSPNLSVLEEIEKSGLKRLLVIGVGCQIQALRAVEDKLG 190
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL S P+TV++YEFMQD++VH KH DG E VP+F
Sbjct: 191 LEKLYVLGTPCVDNVTRAGLQKFLDTTSRSPDTVIYYEFMQDFRVHFKHEDGSTETVPFF 250
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L +L DV APSC SCFDY N LADLVVGYMG P Q+ITVRN+ G+EM
Sbjct: 251 GLNTKELKDVFAPSCMSCFDYVNGLADLVVGYMGAPFGW--------QWITVRNQTGREM 302
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
LSLV++ LE P IS G+R+ V +++ A D P + L+ I VGP
Sbjct: 303 LSLVQDQLETQPMISQGNRQAAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKVGP 355
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL+ R + K A H+P +AKKIV+ Y
Sbjct: 356 KGLEYARFSIDSHFTRNYLYTLRNYPSKLA-AHVPEFAKKIVDQY 399
>gi|427717858|ref|YP_007065852.1| coenzyme F420 hydrogenase [Calothrix sp. PCC 7507]
gi|427350294|gb|AFY33018.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Calothrix sp. PCC 7507]
Length = 402
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/405 (54%), Positives = 280/405 (69%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + P PAK+ CS CGLCDTYYI +VK ACAF+ +I LET H R R
Sbjct: 12 KKAKALKPTSRRPAKELCSECGLCDTYYIHYVKSACAFIN---QQIGELETQTHTRPRNL 68
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GVH++++ ARK +P+EGAQWTGIV++IAIEML G+VE VVCVQ+ +DR
Sbjct: 69 DNPDELYFGVHQDMMAARKQEPIEGAQWTGIVSSIAIEMLNRGIVEGVVCVQNTKEDRFQ 128
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P PV+ARTPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L
Sbjct: 129 PMPVIARTPEEILAARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEKQLG 188
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL+ S P+TV+HYEFMQD++VH KH DG E VP+F
Sbjct: 189 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPDTVVHYEFMQDFRVHFKHEDGSTETVPFF 248
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ GKEM
Sbjct: 249 GLKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEM 300
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LVK+ ++ P +S G+R+ V +++ A D P + L+ I +GP
Sbjct: 301 LDLVKDQIDTQPVMSQGNRKEAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGP 353
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL+V R +G+K + H+P +AK+IV Y
Sbjct: 354 KGLEYARFSIDSHFTRNYLYVKRNYGEK-LEAHVPEFAKRIVGQY 397
>gi|427706065|ref|YP_007048442.1| coenzyme F420 hydrogenase [Nostoc sp. PCC 7107]
gi|427358570|gb|AFY41292.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Nostoc sp. PCC 7107]
Length = 397
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/405 (54%), Positives = 282/405 (69%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + P PAK+ CS CGLCDTYYI +VK+ACAF+ +I+ LE H R R
Sbjct: 8 KKAKALKPTSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQIDTLEAQAHSRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ ++ Y GVH++++ ARK +P+EGAQWTGIV+TIAIEML G+VE VVCVQ+ +DR
Sbjct: 65 DNPEELYFGVHQDMMAARKQQPIEGAQWTGIVSTIAIEMLNRGLVEGVVCVQNTKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P PV+ARTPEE+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+QALR+VE L
Sbjct: 125 PMPVIARTPEEILAARVNKPTLSPNLSILEQVEKSGMKRLLVIGVGCQIQALRAVEKQLG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL+ S P+TV+HYEFMQD+++H KH DG IE+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPDTVVHYEFMQDFRIHFKHSDGSIEKVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ GKEM
Sbjct: 245 GLKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LVK+ ++ P +S G+R+ V + + A D P +V ++ I+ +GP
Sbjct: 297 LDLVKDQIDTQPVMSQGNRQEAVQQGIPAYDKGVT-------LPMWVAKMMGVVIDKIGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL+V R +K + H+P +AK+IV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYVKRNHHEK-LEAHVPEFAKRIVGQY 393
>gi|254412391|ref|ZP_05026165.1| Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminal
domain family protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196180701|gb|EDX75691.1| Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminal
domain family protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 414
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/398 (56%), Positives = 275/398 (69%), Gaps = 19/398 (4%)
Query: 55 PGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTY 114
PG PAK+ CS CGLCDTYYI +VK+ACAFL +I LET HGR R D+ DD Y
Sbjct: 32 PGTIRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIPELETQTHGRSRNLDNPDDWY 88
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
GV++ ++ ARK +P+EGAQWTGIV+TIAIEML +G VE VVCVQ+ +DR P P++AR
Sbjct: 89 FGVNQNMMAARKLQPIEGAQWTGIVSTIAIEMLTSGKVEGVVCVQNTKEDRFQPMPIIAR 148
Query: 175 TPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVL 234
TPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L LEKLYVL
Sbjct: 149 TPEEILAARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEKELGLEKLYVL 208
Query: 235 GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL 294
GT CVDN TR GL KFL+ S P+TV+HYEFMQD++VH KH DG IE+VP+F L +L
Sbjct: 209 GTPCVDNVTRAGLQKFLETTSKSPDTVVHYEFMQDFQVHFKHEDGSIEKVPFFGLNTKEL 268
Query: 295 VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNL 354
DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+RG+EML LV+N
Sbjct: 269 KDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDRGQEMLDLVQNQ 320
Query: 355 LEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFAR 414
LE S GDR V +++ A D P + L+ I +GPKGLE+AR
Sbjct: 321 LETQSVTSKGDRHQAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGPKGLEYAR 373
Query: 415 YSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
+S+D H RNYL+V R +K A H+P +AK+IV Y
Sbjct: 374 FSIDSHFTRNYLYVKRHHPEKLA-AHIPEFAKRIVGQY 410
>gi|428780667|ref|YP_007172453.1| coenzyme F420-reducing hydrogenase subunit beta [Dactylococcopsis
salina PCC 8305]
gi|428694946|gb|AFZ51096.1| coenzyme F420-reducing hydrogenase, beta subunit [Dactylococcopsis
salina PCC 8305]
Length = 398
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/405 (55%), Positives = 278/405 (68%), Gaps = 21/405 (5%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK CS CGLCDT+YI +VK+ACAFL + +I LE HG+ R
Sbjct: 9 KAKGLKPNSPRPAKALCSECGLCDTHYIHYVKEACAFLNE---QIAALEAEAHGKSRDLT 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
DD Y GVH+E++ AR +P+EGAQWTGIV++IA EML G VE VVCVQ+ PDDR P
Sbjct: 66 QEDDLYFGVHQEMMAARNKEPIEGAQWTGIVSSIACEMLTQGKVEGVVCVQNHPDDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
P++ARTPEEVLAA+ KPTLSPNL+ L VE +G KRLL GVGCQ+QALRSV+ + L
Sbjct: 126 MPIIARTPEEVLAARVNKPTLSPNLSILEQVEQSGFKRLLAIGVGCQIQALRSVQDKIGL 185
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
EKLYVLGT CVDN TREGL KFL+ S PETV+HYEFMQD++VH KH DG IE+VP+F
Sbjct: 186 EKLYVLGTPCVDNVTREGLQKFLETTSKSPETVVHYEFMQDFRVHFKHEDGSIEKVPFFG 245
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP-KYTGISMTQHPQYITVRNERGKEM 347
L L DV APSC SCFDY N+LADLVVGYMG P +Y Q++ VRN+ GKEM
Sbjct: 246 LNTKKLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFQY---------QWLVVRNDIGKEM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L+LV + LE P S G+R+ V +++ A D P + L+ I +GP
Sbjct: 297 LNLVADQLETQPVSSQGNRKAAVQQSIPAYDQGVT-------LPMWAAKLMGVVIEKIGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL+V R + +K D H+P +AK+IVE Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYVKRNYPEKLED-HVPEFAKRIVEQY 393
>gi|126655028|ref|ZP_01726467.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Cyanothece sp. CCY0110]
gi|126622507|gb|EAZ93212.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Cyanothece sp. CCY0110]
Length = 398
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/405 (54%), Positives = 280/405 (69%), Gaps = 19/405 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ +I LET+ HG+ R +
Sbjct: 9 KAKALKPGSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQIAELETIAHGKSRNLE 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ ARK +P+EGAQWTGIV++IA EML G+VE VVCVQ+ +DR P
Sbjct: 66 DENDCYFGVHQEMMAARKKEPIEGAQWTGIVSSIACEMLDKGIVEGVVCVQNTKEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
PV+ART EEVLAA+ KPTLSPNL+ L ++ + +KRLL GVGCQ+QALR+VE L L
Sbjct: 126 MPVIARTSEEVLAARVNKPTLSPNLSILEQIKESNLKRLLVIGVGCQIQALRTVEKELGL 185
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
+KLYVLGT CVDN TREGL KFL+ S P+TV+HYEFMQD++VH KH DG IE+VP+F
Sbjct: 186 KKLYVLGTPCVDNVTREGLQKFLETTSQSPDTVVHYEFMQDFRVHFKHEDGSIEKVPFFG 245
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L N L DV APSC SCFDY N+LADLVVGYMG Q+I VRN++GKEM
Sbjct: 246 LKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAEFGW--------QWIMVRNDKGKEMF 297
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
+LV++ + P IS GDR+ V +++ A D P + L+ I VGPK
Sbjct: 298 ALVEDQINTKPVISQGDRKQAVQQSIPAYDKGVT-------LPMWAAKLMGVVIERVGPK 350
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
GLE+AR+S+D H RNYL+V R +K D H+P+YAKKIV Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNHPEK-LDNHVPNYAKKIVSQYQ 394
>gi|282898451|ref|ZP_06306441.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Raphidiopsis brookii D9]
gi|281196617|gb|EFA71523.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Raphidiopsis brookii D9]
Length = 401
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/410 (54%), Positives = 281/410 (68%), Gaps = 21/410 (5%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K+SK + PG PAK+ CS CGLCDTYYI +VK+ACAF+ RIE LE H R R
Sbjct: 10 KKSKALKPGSRRPAKELCSECGLCDTYYIHYVKEACAFI---TQRIEELEVNTHQRCRDL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D ++ Y GVH+E++ ARK P+ GAQWTGIV+TIAIEML G+VE VVCVQ+ +DR
Sbjct: 67 DKENELYFGVHQEMMAARKQVPIVGAQWTGIVSTIAIEMLNCGLVEGVVCVQNSQEDRFQ 126
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P++ARTPE +LAAK KPTLSPNL+ L +E +G+K+LL GVGCQ+QALR+VE L
Sbjct: 127 PMPIIARTPEAILAAKVNKPTLSPNLSVLEEIEQSGMKKLLVIGVGCQIQALRAVEKQLG 186
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL+ S P TV+ YEFMQD++VH KH DG E+VP+F
Sbjct: 187 LEKLYVLGTPCVDNVTRTGLQKFLETTSHSPGTVVSYEFMQDFRVHFKHEDGSEEKVPFF 246
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP-QYITVRNERGKE 346
L N L D+ APSC SCFDY N+LADLVVGYMG P +P Q+I VRN GKE
Sbjct: 247 GLKTNILKDIFAPSCMSCFDYVNSLADLVVGYMGAP---------YPWQWIVVRNNTGKE 297
Query: 347 MLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVG 406
ML LVK LEI P +S G+R+P V + +KA D+A P +V L+ I+ +G
Sbjct: 298 MLDLVKEQLEIQPVMSQGNRQPAVQQGIKAYDDAVT-------LPMWVAQLMGIVIDRIG 350
Query: 407 PKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNG 456
PKGLE+ ++S+D H RNYL+V R K + H+P +AK+IV Y+ G
Sbjct: 351 PKGLEYGKFSIDSHFARNYLYVKRHHPHK-LEAHVPEFAKRIVAQYDLPG 399
>gi|428768872|ref|YP_007160662.1| coenzyme F420 hydrogenase [Cyanobacterium aponinum PCC 10605]
gi|428683151|gb|AFZ52618.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanobacterium aponinum PCC 10605]
Length = 397
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/405 (54%), Positives = 277/405 (68%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + G PAKD CS CGLCDTYYI +VK+ACAF+ +I LET+ HGR R
Sbjct: 8 RKAKALKQGSRRPAKDLCSECGLCDTYYIHYVKEACAFIN---QQITELETIAHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
++ +D Y GVH+E++ A+K +P+EGAQWTGIV+TIA EML G+VE VVCVQ+ +DR
Sbjct: 65 NNENDLYFGVHQEMMSAKKIEPIEGAQWTGIVSTIACEMLTQGLVEGVVCVQNSDEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P+P++A T EE+L AK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L
Sbjct: 125 PKPIIATTTEEILGAKVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEDKLG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL+ S P+TV+ YEFMQD++VH KH DG +E+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTRAGLQKFLETTSKSPDTVVAYEFMQDFRVHFKHEDGSVEKVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ G+EM
Sbjct: 245 GLKTNQLKDVFAPSCMTCFDYVNSLADLVVGYMGAPF--------GWQWIVVRNDIGREM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LVKN L P IS GDR V ++ A D P + L+ I VGP
Sbjct: 297 LDLVKNQLHTQPVISRGDRTQAVQNSIPAYDQGVT-------LPMWAAKLMGVVIEKVGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL+V R + +K D H+P YA+KIV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYVKRNYPEKLKD-HVPEYAEKIVSQY 393
>gi|298492095|ref|YP_003722272.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
domain-containing protein ['Nostoc azollae' 0708]
gi|298234013|gb|ADI65149.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
['Nostoc azollae' 0708]
Length = 399
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/407 (53%), Positives = 281/407 (69%), Gaps = 21/407 (5%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ +I+ LET H R R
Sbjct: 10 KKAKALKPGSVRPAKELCSECGLCDTYYIHYVKEACAFI---TQKIDQLETTTHNRPRNL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+ ++ Y GVH+E++ ARK +P+EGAQWTGIV++IAIEML G+VE VVCVQ+ +DR
Sbjct: 67 EDENELYFGVHQEMMSARKLQPIEGAQWTGIVSSIAIEMLNRGLVEGVVCVQNTKEDRFQ 126
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P++ART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR++E L
Sbjct: 127 PMPIIARTTEEILAAKVNKPTLSPNLSVLEQIEESGMKRLLVIGVGCQIQALRAIEKKLG 186
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL+ S P TV+ YEFMQD++VH KH DG E VP+F
Sbjct: 187 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPATVVSYEFMQDFRVHFKHEDGSEETVPFF 246
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP-QYITVRNERGKE 346
L N L D+ APSC SCFDY N+LAD+VVGYMG P P Q+I VRN+ G+E
Sbjct: 247 GLKTNILKDIFAPSCMSCFDYVNSLADIVVGYMGAP---------FPWQWILVRNDTGQE 297
Query: 347 MLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVG 406
ML LVK+ LE P + GDR+P V + ++A D A P +V L+ I+ +G
Sbjct: 298 MLELVKDQLETQPVMFQGDRKPAVQQGIEAYDKAVT-------LPMWVAKLMGVVIDKIG 350
Query: 407 PKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
PKGLE+ R+S+D H RNYL+V R +K + H+P +A++IV YN
Sbjct: 351 PKGLEYGRFSIDSHFARNYLYVKRNHPEK-LEAHLPEFARRIVGQYN 396
>gi|17229093|ref|NP_485641.1| hypothetical protein all1601 [Nostoc sp. PCC 7120]
gi|20141923|sp|P46015.2|Y1601_ANASP RecName: Full=Uncharacterized protein all1601
gi|17135421|dbj|BAB77967.1| all1601 [Nostoc sp. PCC 7120]
Length = 397
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/405 (54%), Positives = 280/405 (69%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + P PAK+ CS CGLCDTYYI +VK+ACAF+ +I+ LE H R R
Sbjct: 8 QKAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFI---TQQIDTLEEQAHQRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GVH++++ A+K +P+ GAQWTGIV++IAIEML G+VE VVCVQ+ +DR
Sbjct: 65 DNPDELYFGVHQDMIAAKKQQPIAGAQWTGIVSSIAIEMLNHGLVEGVVCVQNSKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P PV+ARTPEE+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+QALR+VE L
Sbjct: 125 PMPVIARTPEEILAARVNKPTLSPNLSILEQVEKSGMKRLLVIGVGCQIQALRAVEKKLG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD+++H KH DG IE+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVHYEFMQDFRIHFKHEDGSIEKVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ GKEM
Sbjct: 245 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWILVRNDTGKEM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV+N L+ P +S G+R+ V + + A D P +V ++ I+ +GP
Sbjct: 297 LDLVQNQLDTQPVMSEGNRQEAVQQGISAYDKGVT-------LPMWVAKIMGVVIDKIGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL V R +K A H+P +AK+IV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLFVKRNHPEKLA-AHVPEFAKRIVGQY 393
>gi|425452531|ref|ZP_18832348.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|389765618|emb|CCI08525.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
Length = 397
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/404 (54%), Positives = 278/404 (68%), Gaps = 19/404 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLDRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L L
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
EKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG IE VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSIEMVPFFG 245
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIMVRNDTGKEML 297
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
LVK+ L +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLNTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|166366747|ref|YP_001659020.1| coenzyme F420 hydrogenase subunit beta [Microcystis aeruginosa
NIES-843]
gi|166089120|dbj|BAG03828.1| coenzyme F420 hydrogenase subunit beta [Microcystis aeruginosa
NIES-843]
Length = 397
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/404 (54%), Positives = 279/404 (69%), Gaps = 19/404 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAEAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLDRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L L
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
EKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG IE VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSIEMVPFFG 245
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEML 297
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
LVK+ L+ +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLDTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|186685427|ref|YP_001868623.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Nostoc
punctiforme PCC 73102]
gi|186467879|gb|ACC83680.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Nostoc punctiforme PCC 73102]
Length = 397
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/405 (53%), Positives = 277/405 (68%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + P PAK+ CS CGLCDTYYI +VK+ACAF+ +I LE H R R
Sbjct: 8 KKAKALKPTSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQIGELEVETHTRSRHL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GVH++++ ARK +P+EGAQWTGIV++IAIEML G+VE VVCVQ+ +DR
Sbjct: 65 DNPDELYFGVHQDMIAARKQQPIEGAQWTGIVSSIAIEMLNRGLVEGVVCVQNTKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P++ARTPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L
Sbjct: 125 PMPIIARTPEEILAARVNKPTLSPNLSVLEQIEKSGMKRLLVIGVGCQIQALRAVEKQLG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN R GL KFL+ S PETV+HYEFMQD++VH KH DG E VP+F
Sbjct: 185 LEKLYVLGTPCVDNVNRAGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSSETVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ GKEM
Sbjct: 245 GLKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV++ L+ P S G+R+ V +++ A D P + L+ I +GP
Sbjct: 297 LDLVQDQLDTQPVTSKGNRKEAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL+V R +K + H+P +AK+IVE Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYVKRNHPEK-LEAHVPEFAKRIVEQY 393
>gi|220907665|ref|YP_002482976.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Cyanothece sp. PCC 7425]
gi|219864276|gb|ACL44615.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. PCC 7425]
Length = 402
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/405 (54%), Positives = 273/405 (67%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K+++ + PAK+ CS CGLCDTYYI +VK ACAFL + + LE+ H R R
Sbjct: 13 KKARALKSSSRRPAKELCSECGLCDTYYIHYVKTACAFLN---QQFDQLESQTHDRPRNL 69
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
++ Y GVH+E++ ARKT+P+ GAQWTGIV+TIAIEML G+VE VVCVQ+ +DR
Sbjct: 70 ADDNELYFGVHQEMMAARKTEPIPGAQWTGIVSTIAIEMLSRGLVEGVVCVQNTAEDRFQ 129
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P+PV+ARTP E+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+QALRSVE L
Sbjct: 130 PKPVIARTPAEILAARVNKPTLSPNLSVLEQVEQSGMKRLLVIGVGCQIQALRSVEQQLG 189
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL+ S P+TV+HYEFMQD++VH KH DG E VP+F
Sbjct: 190 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPQTVVHYEFMQDFRVHFKHEDGSEETVPFF 249
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC SCFDY N LADLVVGYMG P Q++ VRN+RG+EM
Sbjct: 250 GLKTNQLKDVFAPSCMSCFDYVNGLADLVVGYMGAPFGW--------QWLVVRNDRGREM 301
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LVK+ LE P +S GDRR V +++ A D P + L+ I +GP
Sbjct: 302 LELVKDQLETQPVMSQGDRRAAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGP 354
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL V R + K H+P +AK+IV Y
Sbjct: 355 KGLEYARFSIDSHFTRNYLFVKRNYRDKLV-AHVPEFAKRIVNQY 398
>gi|443669256|ref|ZP_21134490.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunitfamily protein
[Microcystis aeruginosa DIANCHI905]
gi|159027297|emb|CAO86839.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330451|gb|ELS45165.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunitfamily protein
[Microcystis aeruginosa DIANCHI905]
Length = 397
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/404 (54%), Positives = 279/404 (69%), Gaps = 19/404 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VKDACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKDACAFLH---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLDRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L L
Sbjct: 126 QPILARTIEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
EKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH +H DG IE VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFQHEDGSIEMVPFFG 245
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEML 297
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
LVK+ L +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLNTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
GLE+AR+S+D H RNYL+V R + +K A+ H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLAN-HVPEYAKKIVEQY 393
>gi|119487009|ref|ZP_01620881.1| hypothetical protein L8106_18871 [Lyngbya sp. PCC 8106]
gi|119455938|gb|EAW37072.1| hypothetical protein L8106_18871 [Lyngbya sp. PCC 8106]
Length = 400
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/406 (53%), Positives = 278/406 (68%), Gaps = 19/406 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + PG PAK+ CS CGLCDTYY+ +V++ACAF+ +I LET HG+ R
Sbjct: 11 RKAKALKPGSRRPAKELCSECGLCDTYYVHYVREACAFIN---QQITQLETQTHGQSRNL 67
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
++ DD Y GVH+ ++ ARK +P+EGAQWTGIV++IA EML G+VE VVCVQ+ +DR
Sbjct: 68 ENDDDLYFGVHQTMMAARKKQPIEGAQWTGIVSSIACEMLTQGIVEGVVCVQNTKEDRFQ 127
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P PV+ARTPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L
Sbjct: 128 PMPVIARTPEEILAARVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKELG 187
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG IE+VP+F
Sbjct: 188 LEKLYVLGTPCVDNVTRAGLQKFLETTSKSPETVVHYEFMQDFRVHFKHEDGSIEKVPFF 247
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L +L D+ APSC SCFDY N+LADLVVGYMG P Q+I VRN+ GKEM
Sbjct: 248 GLNTKELKDIFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEM 299
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV L+ P S G R+P V +++ A D P + L+ I +GP
Sbjct: 300 LDLVSGQLDTQPVHSEGKRQPAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGP 352
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
KGLE+AR+S+D H RNYL+V R +K + H+P +AK+IV Y
Sbjct: 353 KGLEYARFSIDSHFTRNYLYVKRNHPEK-LEAHVPEFAKRIVGQYE 397
>gi|434391958|ref|YP_007126905.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Gloeocapsa sp. PCC 7428]
gi|428263799|gb|AFZ29745.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Gloeocapsa sp. PCC 7428]
Length = 401
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/398 (55%), Positives = 274/398 (68%), Gaps = 19/398 (4%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
PAK+ CS CGLCDTYYI +VK+ACAFL +I LET H R R D+ D+ Y GVH+
Sbjct: 23 PAKELCSECGLCDTYYIHYVKEACAFLN---QQIAELETRSHTRARNLDNSDELYFGVHQ 79
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEV 179
+++ ARKT+P+ GAQWTGIV++IAI ML G+VE VVCVQ+ +DR P P++ARTPEE+
Sbjct: 80 DMMAARKTEPILGAQWTGIVSSIAIAMLNRGVVEGVVCVQNTKEDRFQPMPIIARTPEEI 139
Query: 180 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCV 239
LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+QALR+VE L LEKLYVLGT CV
Sbjct: 140 LAARVNKPTLSPNLSILEQVEQSGMKRLLVIGVGCQIQALRAVEKQLGLEKLYVLGTPCV 199
Query: 240 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIA 299
DN TR GL KFL+ S P+TV+HYEFMQD++VH KH DG E VP+F L N L DV A
Sbjct: 200 DNVTRAGLQKFLETTSRSPDTVVHYEFMQDFRVHFKHEDGSEETVPFFGLKTNQLKDVFA 259
Query: 300 PSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITP 359
PSC SCFDY N+LADLVVGYMG P Q+I VRN+RG+EML LV++ LE P
Sbjct: 260 PSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDRGQEMLDLVQDQLETQP 311
Query: 360 TISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDY 419
+S GDR V +++ A D P + L+ I +GPKGLE+AR+S+D
Sbjct: 312 VMSKGDRTAAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGPKGLEYARFSIDS 364
Query: 420 HTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 457
H RNYL+V R + +K A H+P +AK+IV Y Q
Sbjct: 365 HFTRNYLYVKRHYPEKLA-AHVPEFAKRIVNQYKLPSQ 401
>gi|390438179|ref|ZP_10226671.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389838407|emb|CCI30795.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 397
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/404 (54%), Positives = 279/404 (69%), Gaps = 19/404 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLNRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L L
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
EKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH +G IE VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHENGSIEMVPFFG 245
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIMVRNDTGKEML 297
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
LVK+ L+ +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLDTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|425442236|ref|ZP_18822491.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389716834|emb|CCH98976.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 397
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/404 (54%), Positives = 279/404 (69%), Gaps = 19/404 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLNRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L L
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
EKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG +E VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSMEMVPFFG 245
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIMVRNDTGKEML 297
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
LVK+ L+ +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLDTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|425447724|ref|ZP_18827707.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389731640|emb|CCI04319.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 397
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/404 (54%), Positives = 278/404 (68%), Gaps = 19/404 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLARGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L L
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
EKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH +H DG IE VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFQHEDGSIEMVPFFG 245
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEML 297
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
LVK+ L +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLNTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|425457410|ref|ZP_18837113.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389801237|emb|CCI19572.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 397
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/404 (54%), Positives = 278/404 (68%), Gaps = 19/404 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLDRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L L
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
EKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH +H DG IE VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFQHEDGSIEMVPFFG 245
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEML 297
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
LVK+ L +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLNTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|425438251|ref|ZP_18818656.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389676634|emb|CCH94392.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
Length = 397
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/404 (54%), Positives = 277/404 (68%), Gaps = 19/404 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLNRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L L
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
EKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH +H DG IE VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFQHEDGSIEMVPFFG 245
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNNTGKEML 297
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
LVK+ L +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLNTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|425465794|ref|ZP_18845101.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|389831913|emb|CCI24943.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 397
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/404 (54%), Positives = 279/404 (69%), Gaps = 19/404 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAEAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLNRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L L
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
EKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG +E VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSMEMVPFFG 245
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIMVRNDTGKEML 297
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
LVK+ L+ +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLDTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|425460813|ref|ZP_18840294.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389826458|emb|CCI23007.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 397
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/404 (54%), Positives = 278/404 (68%), Gaps = 19/404 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLDRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L L
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
EKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG +E VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSMEMVPFFG 245
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIMVRNDTGKEML 297
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
LVK+ L +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLNTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|425468516|ref|ZP_18847529.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389884813|emb|CCI34912.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 397
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/404 (54%), Positives = 278/404 (68%), Gaps = 19/404 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKSNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLNRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L L
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
EKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG IE VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSIEMVPFFG 245
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIMVRNDTGKEML 297
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
LVK+ L+ +SSGDR+ V ++ A D +G + P + ++ I +GPK
Sbjct: 298 ELVKDQLDTQDVMSSGDRKQAVQNSIPAYD-----KGVT--LPMWAAKMMGVVIEKIGPK 350
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|422301428|ref|ZP_16388796.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389790684|emb|CCI13466.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 397
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/404 (54%), Positives = 275/404 (68%), Gaps = 19/404 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLH---QQIADLEAEAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y GVH+E++ A+K + + GAQWTGIV+TIA EML G+VE VVCVQ+ +DR P
Sbjct: 66 QENDLYFGVHQEMMAAKKKQAIPGAQWTGIVSTIACEMLNRGLVEGVVCVQNTAEDRFQP 125
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
+P+LART EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L L
Sbjct: 126 QPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALRAVEKKLGL 185
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
EKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG IE VP+F
Sbjct: 186 EKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSIEMVPFFG 245
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 246 LKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEML 297
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
LVK L+ +SSGDR+ V ++ A D P + ++ I +GPK
Sbjct: 298 ELVKAQLDTQDVMSSGDRKQAVQNSIPAYDKGVT-------LPMWAAKMMGVVIEKIGPK 350
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
GLE+AR+S+D H RNYL+V R + +K A H+P YAKKIVE Y
Sbjct: 351 GLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYAKKIVEQY 393
>gi|411116284|ref|ZP_11388772.1| coenzyme F420-reducing hydrogenase, beta subunit [Oscillatoriales
cyanobacterium JSC-12]
gi|410713775|gb|EKQ71275.1| coenzyme F420-reducing hydrogenase, beta subunit [Oscillatoriales
cyanobacterium JSC-12]
Length = 403
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/411 (53%), Positives = 274/411 (66%), Gaps = 19/411 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K+++ + P PAK+ CS CGLCDTYYI +VK+ACAFL I LE HGR R
Sbjct: 12 KKARALKPSSRRPAKELCSECGLCDTYYIHYVKEACAFL---TQHIAELEIEAHGRSRDL 68
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+S DD Y GVH++++ ARK P+ GAQWTGIV++IAI+ML GMVE VVCVQ+ +DR
Sbjct: 69 ESQDDWYFGVHQDMMAARKKDPIPGAQWTGIVSSIAIQMLTRGMVEGVVCVQNTEEDRFQ 128
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P+PV+ART +E+LAA+ KPTLSPNL+ L +E + +KRLL GVGCQ+QALR+VE L
Sbjct: 129 PKPVIARTTDEILAARVNKPTLSPNLSVLEQIEQSNMKRLLVIGVGCQIQALRTVEKQLG 188
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL S P TV+HYEFMQD++VH KH DG E VP+F
Sbjct: 189 LEKLYVLGTPCVDNVTRAGLQKFLDTTSRSPSTVIHYEFMQDFRVHFKHEDGSTEMVPFF 248
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+RG+EM
Sbjct: 249 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDRGQEM 300
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV++ + P +S GDR+ V ++ A D P + L+ I VGP
Sbjct: 301 LDLVRDQIATQPVMSQGDRKQAVQNSIPAYDKGVT-------LPMWAAKLMGVVIERVGP 353
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQI 458
KGLE+AR+S+D H RNYL+V R +K + H+P YAK+IV Y G+
Sbjct: 354 KGLEYARFSIDSHFTRNYLYVKRHHPEK-LESHVPEYAKRIVSQYKLPGRF 403
>gi|75910412|ref|YP_324708.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta-like protein
[Anabaena variabilis ATCC 29413]
gi|75704137|gb|ABA23813.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Anabaena variabilis ATCC 29413]
Length = 397
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/405 (53%), Positives = 277/405 (68%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + P PAK+ CS CGLCDTYYI +VK+ACAF+ +I+ LE H R R
Sbjct: 8 KKAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFI---TQQIDTLEEQAHQRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D D+ Y GVH++++ ARK +P+ GAQWTGIV++IAIEML G+VE VVCVQ+ +DR
Sbjct: 65 DHPDELYFGVHQDMIAARKQQPIPGAQWTGIVSSIAIEMLNRGLVEGVVCVQNSKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P PV+ARTPEE+LAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+QALR+VE L
Sbjct: 125 PMPVIARTPEEILAARVNKPTLSPNLSILEQVEKSGMKRLLVIGVGCQIQALRAVEKKLG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL+ S P+TV+HYEFMQD+++H H DG IE+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPQTVVHYEFMQDFRIHFTHEDGSIEKVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN GKEM
Sbjct: 245 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWILVRNNTGKEM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV++ L+ P +S G+R+ V + + A D P +V ++ I+ +GP
Sbjct: 297 LDLVQDQLDTQPVMSQGNRQEAVQQGISAYDKGVT-------LPMWVAKMMGVVIDKIGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL V R +K + H+P +AK+IV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLFVKRNHPEK-LEAHVPEFAKRIVGQY 393
>gi|428215878|ref|YP_007089022.1| coenzyme F420-reducing hydrogenase subunit beta [Oscillatoria
acuminata PCC 6304]
gi|428004259|gb|AFY85102.1| coenzyme F420-reducing hydrogenase, beta subunit [Oscillatoria
acuminata PCC 6304]
Length = 401
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/406 (53%), Positives = 274/406 (67%), Gaps = 19/406 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
++SK + PG PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG R
Sbjct: 11 QKSKALKPGSRPPAKELCSECGLCDTYYIHYVKEACAFLNQ---QIATLEESAHGLSRNL 67
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
++ D+ Y GVH+ ++ ARK +P+ GAQWTGIV+TIA ML G+VE VVCVQ+ P+DR
Sbjct: 68 ENPDELYFGVHQHMMAARKQEPIAGAQWTGIVSTIACSMLDRGLVEGVVCVQNTPEDRFG 127
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P+LART EVLAAK KPTLSPNL+ L VE +G+KRLL GVGCQ+QALRSV+ L
Sbjct: 128 PMPILARTKAEVLAAKVNKPTLSPNLSVLEQVEQSGMKRLLVIGVGCQIQALRSVQKELG 187
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN +REGL KFL+ S PETV+HYEFMQD+++H KH DG IE+VP+F
Sbjct: 188 LEKLYVLGTPCVDNVSREGLQKFLETTSKSPETVVHYEFMQDFRIHFKHEDGSIEKVPFF 247
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L +L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ G+EM
Sbjct: 248 GLNTKELKDVFAPSCLSCFDYVNSLADLVVGYMGAPYGW--------QWIVVRNQTGQEM 299
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV LE P +S GDR V +++ A + P + L+ I +GP
Sbjct: 300 LDLVTEQLETQPVMSRGDRHAAVQQSIPAYEKGVT-------LPMWAAKLMGVAIERIGP 352
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
KGLE+AR+S+D H RNYL+V R +K + H+P +AK+IV Y
Sbjct: 353 KGLEYARFSIDSHFTRNYLYVKRNHPEK-LEAHVPEFAKQIVSQYQ 397
>gi|416384585|ref|ZP_11684662.1| Coenzyme F420-reducing hydrogenase-like protein [Crocosphaera
watsonii WH 0003]
gi|357265028|gb|EHJ13841.1| Coenzyme F420-reducing hydrogenase-like protein [Crocosphaera
watsonii WH 0003]
Length = 404
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/405 (53%), Positives = 278/405 (68%), Gaps = 19/405 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
+++ + G PAK+ CS CGLCDTYYI +V+ ACAF+ +I LET +HG+ R D
Sbjct: 15 KARGLKRGSRRPAKELCSDCGLCDTYYIHYVRKACAFIN---QQITELETSIHGKSRNLD 71
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+ D+ Y GVH+E++ ARK P+EGAQWTGIV+T+A EML+ G+VE VVCVQ+ +DR P
Sbjct: 72 NEDECYFGVHQEMISARKKVPIEGAQWTGIVSTLACEMLERGLVEGVVCVQNTKEDRFGP 131
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
PV+ART EEVLAA+ KPTLSPNL+ L +E + +KRLL GVGCQ+QALR+VE L L
Sbjct: 132 MPVIARTSEEVLAARVNKPTLSPNLSILEQIEKSNLKRLLVIGVGCQIQALRAVEKELGL 191
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
EKLYVLGT CVDN +REGL KFL+ S P+TV+HYEFMQD++VH KH DG +E+VP+F
Sbjct: 192 EKLYVLGTPCVDNVSREGLQKFLETTSRSPDTVVHYEFMQDFRVHFKHEDGSVEKVPFFG 251
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L N L DV APSC SCFDY N+LADLVVGYMG Q+I VRNE GKEML
Sbjct: 252 LKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAEFGW--------QWIMVRNETGKEML 303
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
L+++ + P IS G+R+ V +++ A D P + L+ I VGPK
Sbjct: 304 GLIEDQINTKPVISHGNRKQAVQQSIPAYDQGVT-------LPMWAAKLMGVVIERVGPK 356
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
GLE+AR+S+D H RNYL++ R KK + H+P+YAKKIV Y
Sbjct: 357 GLEYARFSIDSHFTRNYLYLKRNHPKK-LENHVPNYAKKIVSQYQ 400
>gi|428772990|ref|YP_007164778.1| coenzyme F420 hydrogenase [Cyanobacterium stanieri PCC 7202]
gi|428687269|gb|AFZ47129.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanobacterium stanieri PCC 7202]
Length = 398
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/406 (53%), Positives = 277/406 (68%), Gaps = 19/406 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ +I LET HGR R
Sbjct: 8 KKAKALKPGSRRPAKELCSECGLCDTYYIHYVKEACAFI---HQQIAELETQAHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ +D Y GV++E++ A+K +P+ GAQWTGIV+ IA +ML G+VE VVCVQ+ +DR
Sbjct: 65 DNENDLYFGVYQEMITAQKKEPIAGAQWTGIVSAIACKMLTEGLVEGVVCVQNSENDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P+P++A T EE+L A+ KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR VE L
Sbjct: 125 PKPIIATTTEEILGARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALREVEDKLG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TREGL KFL S P+TV+ YEFMQD++VH KH DG +E+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTREGLQKFLDTTSDSPDTVVAYEFMQDFRVHFKHEDGRVEKVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEM
Sbjct: 245 GLKTNQLKDVFAPSCMTCFDYVNSLADLVVGYMGSPF--------GWQWIVVRNDTGKEM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV++ L+ P +S G+R+ V ++ A D P + L+ I VGP
Sbjct: 297 LDLVQDQLKTQPVMSKGNRKQAVQNSIPAYDKGVT-------LPMWAAKLMGVVIEKVGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
+GLE+AR+S+D H RNYL+V R + +K D H+PSYAKKIV Y
Sbjct: 350 QGLEYARFSIDSHFTRNYLYVKRNYPEK-LDAHVPSYAKKIVSQYQ 394
>gi|443315201|ref|ZP_21044705.1| coenzyme F420-reducing hydrogenase, beta subunit [Leptolyngbya sp.
PCC 6406]
gi|442785212|gb|ELR95048.1| coenzyme F420-reducing hydrogenase, beta subunit [Leptolyngbya sp.
PCC 6406]
Length = 400
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/406 (54%), Positives = 274/406 (67%), Gaps = 20/406 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + PG PAKD CS CGLCDTYYI +VKDACAFL + LET HGR R
Sbjct: 9 QKAKALRPGARRPAKDLCSECGLCDTYYIHYVKDACAFLN---QQFPTLETQTHGRSRDL 65
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+S DD Y GVH++++ ARK +P+EGAQWTGIV+TIAIEML G+VE VVCVQ+ DR
Sbjct: 66 ESEDDCYFGVHQDMMAARKQEPIEGAQWTGIVSTIAIEMLNRGLVEGVVCVQNTDRDRFQ 125
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P++ARTPEE+LAA+ KPTLSPNL+ L V +G+KRLL GVGCQ+QALR+VE L
Sbjct: 126 PMPIIARTPEEILAARVNKPTLSPNLSVLEQVAQSGMKRLLVIGVGCQIQALRAVESQLG 185
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LE+LYVLGT CVDN TR GL KFL S PETV+HYEFMQD++VH KH DG E VP+F
Sbjct: 186 LEQLYVLGTPCVDNVTRAGLQKFLDTTSRSPETVVHYEFMQDFRVHFKHEDGSTETVPFF 245
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L +L DV APSC SCFDY N LADLVVGYMG P Q+I VRN+RG+ M
Sbjct: 246 GLNTRELKDVFAPSCMSCFDYVNGLADLVVGYMGAPFGW--------QWIVVRNDRGQAM 297
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFIN-LVG 406
L V + L+ P S G+R V +++ A D P + L+ I+ ++G
Sbjct: 298 LETVMDQLDTQPVASQGNRVDAVQQSIAAYDKGVT-------LPMWAAKLLGIVIDKVLG 350
Query: 407 PKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
PKGLE+AR+S+D H RNYL+ R + +K A H+P +AK+IV Y
Sbjct: 351 PKGLEYARFSIDSHFTRNYLYTRRNYPEKLA-AHVPEFAKRIVSRY 395
>gi|434404674|ref|YP_007147559.1| coenzyme F420-reducing hydrogenase, beta subunit [Cylindrospermum
stagnale PCC 7417]
gi|428258929|gb|AFZ24879.1| coenzyme F420-reducing hydrogenase, beta subunit [Cylindrospermum
stagnale PCC 7417]
Length = 399
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/405 (53%), Positives = 276/405 (68%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + P PAK+ CS CGLCDTYYI +VK+ACAF+ +I LET H R R
Sbjct: 10 KKAKALKPTSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQIGELETQTHNRPRNL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+ ++ Y GVH++++ ARK +P+EGAQWTGIV++IAIEML G+VE VVCVQ+ +DR
Sbjct: 67 EDENEVYFGVHQDMMAARKQEPIEGAQWTGIVSSIAIEMLNRGLVEGVVCVQNTKEDRFQ 126
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P++ARTPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L
Sbjct: 127 PMPIIARTPEEILAARVNKPTLSPNLSVLEQIEKSGMKRLLVIGVGCQIQALRAVEKQLG 186
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL S P+TV+ YEFMQD++VH KH DG E VP+F
Sbjct: 187 LEKLYVLGTPCVDNVTRAGLQKFLDTTSRSPDTVVSYEFMQDFRVHFKHEDGSTETVPFF 246
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ GKEM
Sbjct: 247 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPF--------RWQWIVVRNDTGKEM 298
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV++ L+ P +S G+R+ V +++ A D P + L+ I +GP
Sbjct: 299 LDLVQDQLDTQPVMSQGNRKEAVQQSIPAYDKGVT-------LPMWAAKLMGVVIERIGP 351
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL+V R +K + H+P +AK+IV Y
Sbjct: 352 KGLEYARFSIDSHFTRNYLYVKRNHPEK-LEAHVPEFAKRIVGQY 395
>gi|443311444|ref|ZP_21041072.1| coenzyme F420-reducing hydrogenase, beta subunit [Synechocystis sp.
PCC 7509]
gi|442778482|gb|ELR88747.1| coenzyme F420-reducing hydrogenase, beta subunit [Synechocystis sp.
PCC 7509]
Length = 401
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/405 (53%), Positives = 272/405 (67%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + P PAK+ CS CGLCDTYY+ +VKDACAF+ +I LET H R R
Sbjct: 12 KKAKALKPSSRRPAKELCSECGLCDTYYVHYVKDACAFIN---QQIAELETQTHTRSRNL 68
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D D+ Y GV++ ++ ARKT P+EGAQWTGIV++IAIEML G+VE VVCVQ+ +DR
Sbjct: 69 DDADELYFGVNQGMMAARKTDPIEGAQWTGIVSSIAIEMLTKGLVEGVVCVQNTKEDRFQ 128
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P++ARTPE++L A+ KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L
Sbjct: 129 PMPIIARTPEDILKARVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRAVEKQLG 188
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL S P TV+ YEFMQDY+VH KH DG E VP+F
Sbjct: 189 LEKLYVLGTPCVDNVTRAGLQKFLDTTSKSPGTVVSYEFMQDYRVHFKHEDGSTETVPFF 248
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN G+EM
Sbjct: 249 GLKTNQLKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNNTGQEM 300
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV++ L++ +SSGDR V +++ A D P + ++ I +GP
Sbjct: 301 LDLVQDQLQVQEVMSSGDRTAAVQQSIPAYDKGVT-------LPMWAAKMMGVVIEKIGP 353
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL+V R +K + H+P +AKKIV Y
Sbjct: 354 KGLEYARFSIDSHFTRNYLYVQRQHPEK-LNAHVPEFAKKIVAQY 397
>gi|334119192|ref|ZP_08493279.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Microcoleus vaginatus FGP-2]
gi|333458663|gb|EGK87280.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Microcoleus vaginatus FGP-2]
Length = 400
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/405 (53%), Positives = 275/405 (67%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
++SK + PG PAK+ CS CGLCDTYYI +VK++CAFL I LE +HGR R
Sbjct: 10 QKSKALKPGSRRPAKELCSECGLCDTYYIHYVKESCAFL---TQHIAELEEEIHGRSRNL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ DD Y GV + ++ ARK +P+EGAQWTGIV+TIAIEML+ G+VE VVCVQ+ +DR
Sbjct: 67 DNPDDWYFGVSQNMMAARKKEPIEGAQWTGIVSTIAIEMLEKGIVEGVVCVQNTKEDRFQ 126
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P++AR EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L
Sbjct: 127 PMPIIARNREEILAAKVNKPTLSPNLSVLEQIEQSGMKRLLVIGVGCQIQALRTVEKKLG 186
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN +R GL KFL S PETV+ YEFMQD+ VH KH DG E+VP+F
Sbjct: 187 LEKLYVLGTPCVDNVSRAGLQKFLDTTSRSPETVVSYEFMQDFNVHFKHEDGSEEQVPFF 246
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L +L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ G+EM
Sbjct: 247 GLNTKELKDVFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGQEM 298
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV + L P +S G+R+ V +++ A + P + L+ FI +GP
Sbjct: 299 LDLVTDQLNTQPVMSKGNRKEAVQQSIPAYEKGVT-------LPMWAAKLMGVFIERIGP 351
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL+V R + +K + H+P YAK+IV Y
Sbjct: 352 KGLEYARFSIDSHFTRNYLYVKRNYPEK-LEAHVPEYAKRIVGQY 395
>gi|434386930|ref|YP_007097541.1| coenzyme F420-reducing hydrogenase, beta subunit [Chamaesiphon
minutus PCC 6605]
gi|428017920|gb|AFY94014.1| coenzyme F420-reducing hydrogenase, beta subunit [Chamaesiphon
minutus PCC 6605]
Length = 397
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/405 (53%), Positives = 276/405 (68%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + P PAK+ CS CGLCDT+YI +VK ACAFL +I LET HGR R
Sbjct: 8 QKAKALKPNSKRPAKELCSECGLCDTHYIHYVKTACAFLN---QQIPTLETQTHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D DD Y GVH++++ ARK +P+ GAQWTGIV+TIAIEML+ G+VE VVCVQ+ P+DR
Sbjct: 65 DKEDDLYFGVHQQMMAARKIEPIPGAQWTGIVSTIAIEMLEQGLVEGVVCVQNTPEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P++ART E+LAAK KPTLSPNL+ L + +G+K+LL GVGCQ+QALR+VE L
Sbjct: 125 PMPIIARTRAEILAAKVNKPTLSPNLSILEQIAESGLKKLLVIGVGCQIQALRAVEKELG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LE+LYVLGT C DN TR GL KFL+ S PETV++YEFMQD+ VH KH DG E VP+F
Sbjct: 185 LEQLYVLGTPCTDNVTRAGLQKFLETTSRSPETVVYYEFMQDFNVHFKHEDGSTELVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L +L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+RG++M
Sbjct: 245 GLNTKELKDVFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDRGQQM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV N +E +S GDR V +++ A D A P +V ++ I+ +GP
Sbjct: 297 LDLVNNAIETQAVMSKGDRTAAVQQSIPAYDKAVT-------LPMWVAKIMGVVIDKIGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL R + +K ++H+P +AKKIV+ Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLFTKRNYPEK-LEQHVPEFAKKIVDRY 393
>gi|119512109|ref|ZP_01631202.1| hypothetical protein N9414_07474 [Nodularia spumigena CCY9414]
gi|119463267|gb|EAW44211.1| hypothetical protein N9414_07474 [Nodularia spumigena CCY9414]
Length = 397
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/405 (53%), Positives = 277/405 (68%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PAK+ CS CGLCDTYYI +VK+ACAF+ +I GLE H R R
Sbjct: 8 KKAKALKSTSRRPAKELCSECGLCDTYYIHYVKEACAFIN---QQIGGLEEQTHKRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ ++ Y GVH++++ ARK +P+EGAQWTGIV+TIAIEML G+VE VVCVQ+ +DR
Sbjct: 65 DNENELYFGVHQDMIAARKQQPIEGAQWTGIVSTIAIEMLNRGLVEGVVCVQNTKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P PV+ARTPEE+LAA+ KPTLSPNL+ L +E +G+ RLL GVGCQ+QALR+VE L
Sbjct: 125 PMPVIARTPEEILAARVNKPTLSPNLSVLEQIEKSGMTRLLVIGVGCQIQALRAVEKELG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL FL+ S P+TV+HYEFMQD++VH KH DG E VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTRAGLQTFLETTSRSPDTVVHYEFMQDFRVHFKHEDGSSETVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEM
Sbjct: 245 GLKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV++ L+ P +S G+R+ V +++ A D P + L+ I +GP
Sbjct: 297 LDLVQDQLDTQPVMSQGNRKEAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL+V R + +K A H+P +AK+IV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEFAKRIVGGY 393
>gi|428216898|ref|YP_007101363.1| coenzyme F420 hydrogenase [Pseudanabaena sp. PCC 7367]
gi|427988680|gb|AFY68935.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Pseudanabaena sp. PCC 7367]
Length = 396
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/404 (53%), Positives = 278/404 (68%), Gaps = 19/404 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++KP+ PAK CS CGLCDTYYI +VK+ACAF+ I+ LE HGR R D
Sbjct: 7 KAKPLKNTTRRPAKALCSECGLCDTYYIHYVKEACAFI---TQHIDELEVESHGRSRDLD 63
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+ ++ Y GVH++++ A+K +P+ GAQWTGIV++IAI+ML+ +VE VVCVQS DR P
Sbjct: 64 NENELYFGVHQDMIAAQKKEPIAGAQWTGIVSSIAIQMLEHKLVEGVVCVQSASHDRFQP 123
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
+PV+ART EVLAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L L
Sbjct: 124 KPVIARTAAEVLAARVNKPTLSPNLSVLEEIEQSGIKRLLVIGVGCQIQALRTVEKELGL 183
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
EKLYVLGT CVDN +R GLDKFL S PETV+HYEFMQD+ VH KH DG IE VP+F
Sbjct: 184 EKLYVLGTPCVDNVSRAGLDKFLNTTSRSPETVVHYEFMQDFNVHFKHEDGSIEMVPFFG 243
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L +L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ GKEML
Sbjct: 244 LNTKELKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEML 295
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
LV++ L+ P +SGDR V + + A DNA P ++ +I+F +N +GPK
Sbjct: 296 DLVQDQLKTQPVDASGDRAAAVQQGIAAYDNATT-------IPIWLAWIISFVVNKIGPK 348
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
GLE+ R+S+D H IRNYL+ R + +K A H+P +AK+IV Y
Sbjct: 349 GLEYGRFSIDSHFIRNYLYTRRNYPQKLA-AHVPEFAKRIVARY 391
>gi|67921512|ref|ZP_00515030.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit,
N-terminal:Coenzyme F420 hydrogenase/dehydrogenase beta
subunit, C-terminal [Crocosphaera watsonii WH 8501]
gi|67856624|gb|EAM51865.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit,
N-terminal:Coenzyme F420 hydrogenase/dehydrogenase beta
subunit, C-terminal [Crocosphaera watsonii WH 8501]
Length = 404
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/405 (53%), Positives = 278/405 (68%), Gaps = 19/405 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
+++ + G PAK+ CS CGLCDTYYI +V+ ACAF+ +I LET +HG+ R D
Sbjct: 15 KARGLKRGSRRPAKELCSDCGLCDTYYIHYVRKACAFIN---QQITELETSIHGKSRNLD 71
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+ ++ Y GVH+E++ ARK P+EGAQWTGIV+T+A EML+ G+VE VVCVQ+ +DR P
Sbjct: 72 NENECYFGVHQEMISARKKVPIEGAQWTGIVSTLACEMLERGLVEGVVCVQNTKEDRFDP 131
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
PV+ART EEVLAA+ KPTLSPNL+ L +E + +KRLL GVGCQ+QALR+VE L L
Sbjct: 132 MPVIARTSEEVLAARVNKPTLSPNLSILEQIEKSNLKRLLVIGVGCQIQALRAVEKELGL 191
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
EKLYVLGT CVDN +REGL KFL+ S P+TV+HYEFMQD++VH KH DG +E+VP+F
Sbjct: 192 EKLYVLGTPCVDNVSREGLQKFLETTSRSPDTVVHYEFMQDFRVHFKHEDGSVEKVPFFG 251
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L N L DV APSC SCFDY N+LADLVVGYMG Q+I VRNE GKEML
Sbjct: 252 LKTNKLKDVFAPSCMSCFDYVNSLADLVVGYMGAEFGW--------QWIMVRNETGKEML 303
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
L+++ + P IS G+R+ V +++ A D P + L+ I VGPK
Sbjct: 304 GLIEDQINTKPVISHGNRKQAVQQSIPAYDQGVT-------LPMWAAKLMGVVIERVGPK 356
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
GLE+AR+S+D H RNYL++ R KK + H+P+YAKKIV Y
Sbjct: 357 GLEYARFSIDSHFTRNYLYLKRNHPKK-LENHVPNYAKKIVSQYQ 400
>gi|300869262|ref|ZP_07113854.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Oscillatoria sp. PCC 6506]
gi|300332718|emb|CBN59052.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Oscillatoria sp. PCC 6506]
Length = 400
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/405 (53%), Positives = 274/405 (67%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + P PAK+ CS CGLCDTYYI +VK+ACAFL I LE +HGR R
Sbjct: 10 KKAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFL---TQHIAELEAEIHGRSRNL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ DD Y GV++ ++ ARK +P+EGAQWTGIV+TIAIEML G+VE VVCVQ+ +DR
Sbjct: 67 DNPDDWYFGVNQTMMAARKKEPIEGAQWTGIVSTIAIEMLNRGIVEGVVCVQNTKEDRFQ 126
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P++A TPEE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L
Sbjct: 127 PMPIIATTPEEILAAKVNKPTLSPNLSVLEQIEKSGMKRLLVIGVGCQIQALRTVEKKLG 186
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN +R+GL KFL+ S ETV+ YEFMQD+ VH KH DG E+VP+F
Sbjct: 187 LEKLYVLGTPCVDNVSRDGLQKFLETTSRSHETVVSYEFMQDFNVHFKHEDGTTEKVPFF 246
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L +L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ G+EM
Sbjct: 247 GLNTKELKDVFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGQEM 298
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV L P +S G+R P V +++ A + P + L+ FI +GP
Sbjct: 299 LDLVMEQLNTQPVMSQGNRMPAVQQSIPAYEKGVT-------LPMWAAKLMGVFIEKIGP 351
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL+V R +K + H+P YAK+IV Y
Sbjct: 352 KGLEYARFSIDSHFTRNYLYVKRNHPEK-LEAHVPEYAKRIVGQY 395
>gi|428220142|ref|YP_007104312.1| coenzyme F420-reducing hydrogenase subunit beta [Synechococcus sp.
PCC 7502]
gi|427993482|gb|AFY72177.1| coenzyme F420-reducing hydrogenase, beta subunit [Synechococcus sp.
PCC 7502]
Length = 396
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/393 (54%), Positives = 269/393 (68%), Gaps = 19/393 (4%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
PAK CS CGLCDTYYI +VK+ACAF+ I+ LE H R R D+ + Y GVH+
Sbjct: 18 PAKALCSECGLCDTYYIHYVKEACAFI---TQHIQELEVQTHRRDRNLDNEQELYFGVHQ 74
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEV 179
E++ ARKT P+ GAQWTGIV++IAIEML +G VE VVCVQ+ DR +P+P++A TPEE+
Sbjct: 75 EMIAARKTDPIAGAQWTGIVSSIAIEMLTSGKVEGVVCVQASDSDRFTPKPIIATTPEEI 134
Query: 180 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCV 239
LAA+ KPTLSPNL+ L LVE +G+KRLL GVGCQ+QALR+VE L LEKLYVLGT CV
Sbjct: 135 LAARVNKPTLSPNLSVLELVERSGMKRLLVIGVGCQIQALRTVEKQLGLEKLYVLGTPCV 194
Query: 240 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIA 299
DN R GL KFL S P TV+ YEFMQD+ VH KH DG E VP+F L +L DV A
Sbjct: 195 DNVNRAGLQKFLDTTSRSPSTVVSYEFMQDFNVHFKHEDGSTEMVPFFGLNTKELKDVFA 254
Query: 300 PSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITP 359
PSC +CFDY N+LADLVVGYMG P Q+I VRN+ GKEML V++ LE P
Sbjct: 255 PSCMTCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGKEMLESVQSQLESQP 306
Query: 360 TISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDY 419
+SSGDR V + + A DNA P +V ++I F +N +GPKGLE+ R+S+D
Sbjct: 307 VMSSGDRHSAVQQGIAAYDNATT-------LPMWVASIINFVVNKIGPKGLEYGRFSIDS 359
Query: 420 HTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
H IRNYL+ R + +K + H+P +AK+I+ Y
Sbjct: 360 HFIRNYLYTKRNYPQK-LEAHVPEFAKRIIAQY 391
>gi|56750204|ref|YP_170905.1| hypothetical protein syc0195_d [Synechococcus elongatus PCC 6301]
gi|81300168|ref|YP_400376.1| coenzyme F420 hydrogenase [Synechococcus elongatus PCC 7942]
gi|56685163|dbj|BAD78385.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81169049|gb|ABB57389.1| coenzyme F420 hydrogenase [Synechococcus elongatus PCC 7942]
Length = 401
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/406 (52%), Positives = 275/406 (67%), Gaps = 19/406 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+R++ + PG PAKD CS CGLCDT Y+ +VK+ACAFL + E LE VHGR R
Sbjct: 8 RRARALKPGSRRPAKDLCSECGLCDTSYVHYVKEACAFLN---QQFEPLEQQVHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
++ D+ Y GVH+ + A+K +P+EGAQWTGIV+ +A ML+ G VE VVCVQ+ P DR
Sbjct: 65 ENPDELYFGVHQSMTAAQKREPIEGAQWTGIVSALACRMLEQGWVEGVVCVQNSPSDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P PV+ART +E+LAA+ KPTLSPNLN L L+E +G+KRLL GVGCQ+QALR+V+ L
Sbjct: 125 PMPVIARTTDEILAARVNKPTLSPNLNILDLIEQSGLKRLLVIGVGCQIQALRAVQDKLG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
L+KLYVLGT CVDN +R GL KFL+ S PETV+HYEFMQD+++H KH DG IE VP+F
Sbjct: 185 LDKLYVLGTPCVDNVSRAGLQKFLETTSRSPETVVHYEFMQDFRIHFKHEDGSIEMVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L +L DV APSC SCFDYTN LADLVVGYMG P Q++ VRNE G+EM
Sbjct: 245 GLKTKELKDVFAPSCLSCFDYTNGLADLVVGYMGAPFGW--------QWLVVRNEIGQEM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L+++ L + P SSGDRR V ++ A + P + L+ I +GP
Sbjct: 297 FDLIQDDLRLQPVQSSGDRRAAVQNSIPAYEQGVQ-------LPMWAAKLMGLVIERIGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
KGLE+AR+S+D H RN L+V R + +K A+ H+P +AK+IV Y
Sbjct: 350 KGLEYARFSIDSHFTRNALYVRRNYPEK-AETHIPEFAKRIVSQYQ 394
>gi|158335991|ref|YP_001517165.1| coenzyme F420 hydrogenase subunit beta [Acaryochloris marina
MBIC11017]
gi|158306232|gb|ABW27849.1| coenzyme F420 hydrogenase beta subunit [Acaryochloris marina
MBIC11017]
Length = 399
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/406 (52%), Positives = 271/406 (66%), Gaps = 19/406 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PAK+ CS CGLCDTYYI +VK+ACAFL ++ LE HGR R
Sbjct: 10 KKAKALKSTSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQVAELEEKAHGRSRDL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ DD Y GV +++ ARK P+ GAQWTGIV+TI +EMLK G V+ VVC+Q+ +DR
Sbjct: 67 DNEDDWYFGVSNQMMTARKVDPIPGAQWTGIVSTIGMEMLKQGKVDGVVCIQNTDEDRFQ 126
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P+P++ARTPEEVLAA+ KPTLSPNL+ L +E +G+KRL GVGCQ QALRSV+ L
Sbjct: 127 PKPIIARTPEEVLAARVNKPTLSPNLSVLEQIEQSGLKRLCVIGVGCQTQALRSVQDSLG 186
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN R GL FL+ S P+TV+HYEFMQD+++H KH DG IE VP+F
Sbjct: 187 LEKLYVLGTPCVDNVNRAGLQTFLETTSRSPDTVVHYEFMQDFRIHFKHEDGSIETVPFF 246
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L D+ APSC SCFDYTN+LADLVVGYMG P Q++ VRNE G+EM
Sbjct: 247 GLKTNKLKDIFAPSCMSCFDYTNSLADLVVGYMGSP--------YGWQWLVVRNETGQEM 298
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV + LE P IS GDR V ++ A D P + L+ I+ +GP
Sbjct: 299 LDLVMDQLETQPVISEGDRHAAVQNSIPAYDKGVT-------LPMWAAKLMGVVIDKIGP 351
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
+GLE+AR+S+D H RNYL+V R + K D H+P YAK+IV Y+
Sbjct: 352 RGLEYARFSIDSHFTRNYLYVKRNYPDK-VDAHVPEYAKRIVSQYD 396
>gi|443322535|ref|ZP_21051555.1| coenzyme F420-reducing hydrogenase, beta subunit [Gloeocapsa sp.
PCC 73106]
gi|442787696|gb|ELR97409.1| coenzyme F420-reducing hydrogenase, beta subunit [Gloeocapsa sp.
PCC 73106]
Length = 397
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/405 (52%), Positives = 273/405 (67%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
++++ + PG PAK+ CS CGLCDT+YI +VK+ACAFL +I LE HGR R
Sbjct: 8 QKARALKPGSRRPAKELCSECGLCDTHYIHYVKEACAFLN---QQIAALEATFHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ ++ Y GVH++++ ARK +P+EGAQWTGIV+ IA ML G VE VVCVQ+ +DR
Sbjct: 65 DNENELYFGVHQQMIAARKKEPIEGAQWTGIVSAIACTMLTQGKVEGVVCVQNTKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P+LA TPEE+LAA+ KPTLSPNL+ L +E +G+KR+L GVGCQ+QALR+VE L
Sbjct: 125 PMPILATTPEEILAARVNKPTLSPNLSILEQIEKSGMKRVLAIGVGCQIQALRTVEKKLG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TREGL KFL S PETV+HYEFMQD++VH KH DG +E+VP+F
Sbjct: 185 LEKLYVLGTPCVDNVTREGLQKFLDTTSRSPETVVHYEFMQDFQVHFKHEDGSVEKVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC SCFDY N+LADLVVGYMG P Q++ VRN+ G+EM
Sbjct: 245 GLKTNQLKDVFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWLVVRNDTGQEM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV LE +S GDR V +++ A D P + L+ I +GP
Sbjct: 297 LDLVWEQLETQAVMSKGDRHQAVQQSIPAYDKGVT-------LPMWAAKLMGVVIEKIGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL++ R + KK + +P YA+KIV Y
Sbjct: 350 KGLEYARFSIDSHFTRNYLYLKRNYPKK-LESQVPEYAQKIVNQY 393
>gi|86605899|ref|YP_474662.1| coenzyme F420 hydrogenase/dehydrogenase family protein
[Synechococcus sp. JA-3-3Ab]
gi|86554441|gb|ABC99399.1| coenzyme F420 hydrogenase/dehydrogenase family protein
[Synechococcus sp. JA-3-3Ab]
Length = 402
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/410 (53%), Positives = 282/410 (68%), Gaps = 26/410 (6%)
Query: 50 SKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGR---- 105
++PI G YPAK+ CS+CGLCDT Y+AHVK+ACAFL +R LE HGR R
Sbjct: 9 ARPIR-SGHYPAKELCSQCGLCDTRYVAHVKEACAFLNQQFTR---LEEQTHGRSRESLR 64
Query: 106 -RKDSLDDT-YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPD 163
+ D++ D+ Y GV+E + AR+ P+ GAQWTGIV++I ++ L +G+VE VVCVQ+DP
Sbjct: 65 SKSDAVSDSDYFGVYEAMYTARRRDPIPGAQWTGIVSSIGMKALSSGLVEGVVCVQADPR 124
Query: 164 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE 223
DR PRPVLARTPE VLAA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+QALR+VE
Sbjct: 125 DRFQPRPVLARTPEAVLAARVNKPTLSPNLSVLEQVEQSGLKRLLVIGVGCQIQALRAVE 184
Query: 224 HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEE 283
+L LEKLYVLGT CVDN +R GL KFL+ S P+TV+HYEFMQD+ VH KH DG +E+
Sbjct: 185 KNLGLEKLYVLGTPCVDNVSRAGLQKFLETTSRSPQTVVHYEFMQDFHVHFKHEDGSVEK 244
Query: 284 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNER 343
VP+F L +L DV APSC +CFDY N+LADLVVGYMG P Q++ VRN R
Sbjct: 245 VPFFGLKTKELKDVFAPSCLTCFDYVNSLADLVVGYMGSPFGW--------QWLLVRNAR 296
Query: 344 GKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFIN 403
G+E+L LV LE P IS G RR V + ++A + A P ++ L+A I
Sbjct: 297 GRELLDLVWEELETQPVISRGSRRAAVQQGIQAYEQAL-------SLPMWLAQLLAVAIQ 349
Query: 404 LVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
GP+GLE+AR+S+D H +RNYL+V R + K ++H+P +A++IVE Y
Sbjct: 350 RFGPRGLEYARFSIDSHFVRNYLYVRRHYPHK-LEQHVPPFARRIVEQYQ 398
>gi|359460880|ref|ZP_09249443.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Acaryochloris sp. CCMEE 5410]
Length = 397
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/406 (52%), Positives = 271/406 (66%), Gaps = 19/406 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + PAK+ CS CGLCDTYYI +VK+ACAFL ++ LE HGR R
Sbjct: 8 KKAKALKSTSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQVAELEEKAHGRSRDL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ DD Y GV +++ ARK P+ GAQWTGIV+TI +EMLK G V+ VVC+Q+ +DR
Sbjct: 65 DNEDDWYFGVSNQMMTARKVDPIPGAQWTGIVSTIGMEMLKQGKVDGVVCIQNTDEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P+P++ARTPEEVLAA+ KPTLSPNL+ L +E +G+KRL GVGCQ QALRSV+ L
Sbjct: 125 PKPIIARTPEEVLAARVNKPTLSPNLSVLEQIEQSGLKRLCVIGVGCQTQALRSVQDSLG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN R GL FL+ S P+TV+HYEFMQD+++H KH DG IE VP+F
Sbjct: 185 LEKLYVLGTPCVDNVNRAGLQTFLETTSRSPDTVVHYEFMQDFRIHFKHEDGSIETVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L D+ APSC SCFDYTN+LADLVVGYMG P Q++ VRNE G+EM
Sbjct: 245 GLKTNKLKDIFAPSCMSCFDYTNSLADLVVGYMGSPYGW--------QWLVVRNETGQEM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV + LE P IS GDR V ++ A D P + L+ I+ +GP
Sbjct: 297 LDLVMDQLETQPVISEGDRHAAVQNSIPAYDKGVT-------LPMWAAKLMGVVIDKIGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
+GLE+AR+S+D H RNYL+V R + K D H+P YAK+IV Y+
Sbjct: 350 RGLEYARFSIDSHFTRNYLYVKRNYPDK-VDAHVPEYAKRIVSQYD 394
>gi|407961454|dbj|BAM54694.1| hypothetical protein BEST7613_5763 [Bacillus subtilis BEST7613]
Length = 405
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/405 (54%), Positives = 275/405 (67%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ + + LE HGR R
Sbjct: 15 QKAKGLKPGSPRPAKELCSDCGLCDTYYIHYVKEACAFIN---QQFDHLEEQTHGRSREL 71
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ Y GVH+++L A+K +P+ GAQWTGIV+TI EML G+VE VVCVQ+ P+DR
Sbjct: 72 GKEDEVYFGVHQKMLTAQKKEPIPGAQWTGIVSTIGCEMLNKGLVEGVVCVQNTPEDRFQ 131
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P+ V+ARTP EVLAAK KPTLSPNL+ L VE +G+KRLL GVGCQ+QALR+VE L
Sbjct: 132 PQVVIARTPAEVLAAKVNKPTLSPNLSVLEEVEKSGLKRLLVIGVGCQIQALRAVEKQLG 191
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN +R GL KFL+ S PETV++YEFMQD++VH KH DG E VP+F
Sbjct: 192 LEKLYVLGTPCVDNVSRAGLQKFLETTSRSPETVVYYEFMQDFRVHFKHEDGSTELVPFF 251
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L +V APSC SCFDY N LADLVVGYMG P Q++ VRN+ G+EM
Sbjct: 252 GLKTNQLKEVFAPSCMSCFDYVNGLADLVVGYMGAPFGW--------QWLVVRNQTGQEM 303
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV++ L I SSGDR V + + A D A P +V ++ I+ +GP
Sbjct: 304 LDLVQDQLHIGQVSSSGDRHQAVQQGITAYDKAVT-------LPMWVAKIMGLVIDKIGP 356
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
GLE+AR+S+D H RNYL+V R +K AD H+P +AKKIVE Y
Sbjct: 357 TGLEYARFSIDSHFTRNYLYVKRNHPEKLAD-HVPPFAKKIVEQY 400
>gi|428318671|ref|YP_007116553.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Oscillatoria nigro-viridis PCC 7112]
gi|428242351|gb|AFZ08137.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Oscillatoria nigro-viridis PCC 7112]
Length = 400
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/405 (53%), Positives = 275/405 (67%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
++SK + PG PAK+ CS CGLCDTYYI +VK++CAFL I LE +HGR R
Sbjct: 10 QKSKALKPGSRRPAKELCSECGLCDTYYIHYVKESCAFL---TQHIAELEAEIHGRSRNL 66
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
++ DD Y GV + ++ ARK +P+EGAQWTGIV+TIAIEML+ G+VE VVCVQ+ +DR
Sbjct: 67 NNPDDWYFGVSQNMMAARKKEPIEGAQWTGIVSTIAIEMLEKGIVEGVVCVQNTKEDRFQ 126
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P++A EE+LAAK KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR+VE L
Sbjct: 127 PMPIIATNREEILAAKVNKPTLSPNLSVLEQIEKSGMKRLLVIGVGCQIQALRTVEKKLG 186
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN +R GL KFL S PETV+ YEFMQD+KVH KH DG E+VP+F
Sbjct: 187 LEKLYVLGTPCVDNVSRAGLQKFLDTTSRSPETVVSYEFMQDFKVHFKHEDGSEEKVPFF 246
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L +L DV APSC SCFDY N+LADLVVGYMG P Q+I VRN+ G+EM
Sbjct: 247 GLNTKELKDVFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDTGQEM 298
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV + L P +S G+R+ V +++ A + P + L+ FI +GP
Sbjct: 299 LDLVTDQLNTQPVMSKGNRKEAVQQSIPAYEKGVT-------LPMWAAKLMGVFIERIGP 351
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL+V R + +K + H+P YAK+IV Y
Sbjct: 352 KGLEYARFSIDSHFTRNYLYVKRNYPEK-LEAHVPEYAKRIVGQY 395
>gi|16331168|ref|NP_441896.1| hypothetical protein slr1923 [Synechocystis sp. PCC 6803]
gi|383322911|ref|YP_005383764.1| hypothetical protein SYNGTI_2002 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326080|ref|YP_005386933.1| hypothetical protein SYNPCCP_2001 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491964|ref|YP_005409640.1| hypothetical protein SYNPCCN_2001 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437232|ref|YP_005651956.1| hypothetical protein SYNGTS_2003 [Synechocystis sp. PCC 6803]
gi|451815324|ref|YP_007451776.1| hypothetical protein MYO_120210 [Synechocystis sp. PCC 6803]
gi|1653662|dbj|BAA18574.1| slr1923 [Synechocystis sp. PCC 6803]
gi|339274264|dbj|BAK50751.1| hypothetical protein SYNGTS_2003 [Synechocystis sp. PCC 6803]
gi|359272230|dbj|BAL29749.1| hypothetical protein SYNGTI_2002 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275400|dbj|BAL32918.1| hypothetical protein SYNPCCN_2001 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278570|dbj|BAL36087.1| hypothetical protein SYNPCCP_2001 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451781293|gb|AGF52262.1| hypothetical protein MYO_120210 [Synechocystis sp. PCC 6803]
Length = 398
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/406 (53%), Positives = 275/406 (67%), Gaps = 19/406 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + PG PAK+ CS CGLCDTYYI +VK+ACAF+ + + LE HGR R
Sbjct: 8 QKAKGLKPGSPRPAKELCSDCGLCDTYYIHYVKEACAFIN---QQFDHLEEQTHGRSREL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ Y GVH+++L A+K +P+ GAQWTGIV+TI EML G+VE VVCVQ+ P+DR
Sbjct: 65 GKEDEVYFGVHQKMLTAQKKEPIPGAQWTGIVSTIGCEMLNKGLVEGVVCVQNTPEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P+ V+ARTP EVLAAK KPTLSPNL+ L VE +G+KRLL GVGCQ+QALR+VE L
Sbjct: 125 PQVVIARTPAEVLAAKVNKPTLSPNLSVLEEVEKSGLKRLLVIGVGCQIQALRAVEKQLG 184
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN +R GL KFL+ S PETV++YEFMQD++VH KH DG E VP+F
Sbjct: 185 LEKLYVLGTPCVDNVSRAGLQKFLETTSRSPETVVYYEFMQDFRVHFKHEDGSTELVPFF 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L +V APSC SCFDY N LADLVVGYMG P Q++ VRN+ G+EM
Sbjct: 245 GLKTNQLKEVFAPSCMSCFDYVNGLADLVVGYMGAPFGW--------QWLVVRNQTGQEM 296
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV++ L I SSGDR V + + A D A P +V ++ I+ +GP
Sbjct: 297 LDLVQDQLHIGQVSSSGDRHQAVQQGITAYDKAVT-------LPMWVAKIMGLVIDKIGP 349
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
GLE+AR+S+D H RNYL+V R +K AD H+P +AKKIVE Y
Sbjct: 350 TGLEYARFSIDSHFTRNYLYVKRNHPEKLAD-HVPPFAKKIVEQYK 394
>gi|170079232|ref|YP_001735870.1| putative coenzyme F420 hydrogenase/dehydrogenase subunit beta
[Synechococcus sp. PCC 7002]
gi|169886901|gb|ACB00615.1| putative coenzyme F420 hydrogenase/dehydrogenase, beta subunit
[Synechococcus sp. PCC 7002]
Length = 399
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/406 (52%), Positives = 269/406 (66%), Gaps = 19/406 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K +P G PAK CS CGLCDT++I +VK+ACAFL + + LET VHGR R
Sbjct: 9 KKAKGLPRGSVRPAKALCSDCGLCDTHFIHYVKEACAFLN---QQFDKLETKVHGRKRDL 65
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D + Y GVH++++ ARKT+P+EGAQWTGIV+++A +ML+ +VE VVCVQS PDDR
Sbjct: 66 DQEQEMYFGVHQKMVAARKTEPIEGAQWTGIVSSLACKMLEEKLVEGVVCVQSSPDDRFQ 125
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P++A TPEE+LAA+ KPTLSPNL L +E G K+LL GVGCQ+QALR+V+ L
Sbjct: 126 PMPIIATTPEEILAARVNKPTLSPNLTILEQIEQGGFKKLLVIGVGCQIQALRAVQDKLG 185
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLG CVDN TR GL KFL S PETV++YEFMQD+KVH KH DG E VP+F
Sbjct: 186 LEKLYVLGLPCVDNVTRAGLQKFLDTTSRSPETVVYYEFMQDFKVHFKHEDGSTETVPFF 245
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L DV APSC SCFDYTN LADLVVGYMG P Q++ VRNE G+EM
Sbjct: 246 GLKTNQLKDVFAPSCMSCFDYTNGLADLVVGYMGAPFGW--------QWMVVRNETGQEM 297
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
LV + +E P S GDRR V ++ A D P + L+ I +GP
Sbjct: 298 FDLVADQIETQPVSSKGDRRAAVQNSIPAYDKGVT-------LPMWAAKLMGIVIEKIGP 350
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
KGLE+A++S+D H RNYL+ R + K + H+P +AKKIV Y
Sbjct: 351 KGLEYAKFSIDSHFTRNYLYTRRNYPGK-LEAHVPEFAKKIVAQYE 395
>gi|428302019|ref|YP_007140325.1| coenzyme F420 hydrogenase [Calothrix sp. PCC 6303]
gi|428238563|gb|AFZ04353.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Calothrix sp. PCC 6303]
Length = 404
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/413 (51%), Positives = 278/413 (67%), Gaps = 26/413 (6%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
K++K + G PAK+ CS CGLCDTY++ +VK+ACAF+ +I LE HGR R
Sbjct: 8 KKAKALKAGSRRPAKELCSECGLCDTYFVHYVKNACAFIN---QQIGALEQQTHGRERLT 64
Query: 108 -------DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQS 160
++ D+ Y GVH++++ ARK +P+EGAQWTGIV++IAIEML GMVE VVCVQ+
Sbjct: 65 SRQLPILENPDELYFGVHQQMMAARKVEPIEGAQWTGIVSSIAIEMLNRGMVEGVVCVQN 124
Query: 161 DPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALR 220
+DR P PV+ARTPEE+LAA+ KPTLSPNL+ L +E +G+KRLL GVGCQ+QALR
Sbjct: 125 TKEDRFQPMPVIARTPEEILAARVNKPTLSPNLSVLEEIEKSGMKRLLVIGVGCQIQALR 184
Query: 221 SVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGH 280
+VE L LEKLYVLGT CVDN TR GL KFL S P+TV++YEFMQD++VH KH DG
Sbjct: 185 AVEKQLGLEKLYVLGTPCVDNVTRAGLQKFLDTTSKSPDTVVYYEFMQDFRVHFKHEDGS 244
Query: 281 IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVR 340
+E VP+F L +L DV APSC SCFDY N+LADLVVGYMG P Q++ VR
Sbjct: 245 LETVPFFGLNTKELKDVFAPSCMSCFDYVNSLADLVVGYMGAPFGW--------QWLIVR 296
Query: 341 NERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAF 400
N+ GKEML LV++ +E P S G R+ V +++ A D P + L+
Sbjct: 297 NDTGKEMLELVQDQIETQPVTSQGKRQEAVQQSIPAYDKGVT-------LPMWAAKLMGV 349
Query: 401 FINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
I +GPKGLE+AR+S+D H RNYL+V R +K + H+P +AK+IV+ Y
Sbjct: 350 VIEKIGPKGLEYARFSIDSHFTRNYLYVKRHHPEK-LESHVPEFAKQIVKQYK 401
>gi|86608737|ref|YP_477499.1| coenzyme F420 hydrogenase/dehydrogenase family protein
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557279|gb|ABD02236.1| coenzyme F420 hydrogenase/dehydrogenase family protein
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 402
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/410 (53%), Positives = 277/410 (67%), Gaps = 26/410 (6%)
Query: 50 SKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGR---R 106
++PI G YPAK+ CS+CGLCDT Y+AHVK+ACAFL +++ LE HGR R R
Sbjct: 9 ARPIR-SGRYPAKELCSQCGLCDTRYVAHVKEACAFLNQQLTQ---LEEQTHGRSRESLR 64
Query: 107 KDSL---DDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPD 163
SL D Y GV+E + ARK P+ GAQWTGIV++I ++ L TG+VE VVCVQ+D
Sbjct: 65 SGSLAVTDTDYFGVYEAMYTARKRDPIPGAQWTGIVSSIGMKALTTGLVEGVVCVQADER 124
Query: 164 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE 223
DR PRP+LARTPE V AA+ KPTLSPNL+ L VE +G+KRLL GVGCQ+QALR+VE
Sbjct: 125 DRFQPRPILARTPEAVWAARVNKPTLSPNLSVLEQVEQSGLKRLLVIGVGCQIQALRAVE 184
Query: 224 HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEE 283
L LEKLYVLGT CVDN +R GL KFL+ S P+TV+HYEFMQD+ +H KH DG +E+
Sbjct: 185 KKLGLEKLYVLGTPCVDNVSRAGLQKFLETTSRSPQTVVHYEFMQDFHIHFKHEDGSVEK 244
Query: 284 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNER 343
VP+F L +L DV APSC SCFDY NALADLVVGYMG P Q++ VRN+R
Sbjct: 245 VPFFGLKTKELKDVFAPSCLSCFDYVNALADLVVGYMGSPLGW--------QWLLVRNQR 296
Query: 344 GKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFIN 403
G+E+L LV LE P IS G RR V + + A D A P ++ L+ I
Sbjct: 297 GQELLDLVWEELETQPVISQGSRRAAVQQGIPAYDQAL-------SLPMWLARLLGAAIQ 349
Query: 404 LVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
GP+GLE+AR+S+D H RNYL+V R + +K ++H+P +A++IVE Y
Sbjct: 350 RFGPRGLEYARFSIDSHFTRNYLYVRRHYPQK-LEQHVPPFARRIVEQYQ 398
>gi|449016811|dbj|BAM80213.1| similar to coenzyme F420-reducing hydrogenase, beta subunit
[Cyanidioschyzon merolae strain 10D]
Length = 508
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/405 (53%), Positives = 267/405 (65%), Gaps = 29/405 (7%)
Query: 58 TYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGV 117
YPAK CS CGLCDT YI +V+D+CAFL I LE VHGR R DS D+ Y GV
Sbjct: 118 VYPAKSLCSHCGLCDTRYITYVRDSCAFLNQ---HIAELEQKVHGRSRALDSEDELYFGV 174
Query: 118 HEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPE 177
+ +L ARK KP+ GAQWTGIV+++AI ML++G+VE VVCVQS DDR P PV+AR
Sbjct: 175 FQSMLVARKKKPIAGAQWTGIVSSLAIAMLESGLVEGVVCVQSSKDDRFKPVPVIARNRA 234
Query: 178 EVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTN 237
E+LAA+ KPTLSPNL+ L VE +G+KRLLF GVGCQV+ALRSV+ + LEKLYVLGT
Sbjct: 235 EILAARVNKPTLSPNLSVLDAVERSGIKRLLFIGVGCQVEALRSVQDRIGLEKLYVLGTP 294
Query: 238 CVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI--------EEVPYFCL 289
CVDN TR GL KFL SS PETV++YEFMQD++VH KH D I E VP+F L
Sbjct: 295 CVDNVTRAGLQKFLDTTSSSPETVVYYEFMQDFRVHFKHDDSVIGGPGRKWDEIVPFFAL 354
Query: 290 PANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 349
+L +V APSC SCFDY N LADLVVGYMG P Q++ RNE G EML
Sbjct: 355 NTQELKEVFAPSCLSCFDYVNGLADLVVGYMGAPF--------GWQWLVARNETGLEMLE 406
Query: 350 LVKNL--LEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L + + LE P + GDRR V +++ A D A P+++ +A I +GP
Sbjct: 407 LARQVCGLEEGPVDACGDRRAAVQQSITAYDRALT-------LPRWIAEFLAIIIGKIGP 459
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+AR+S+D H RNYL+V R + +K D H+P YAK+IV Y
Sbjct: 460 KGLEYARFSIDSHFTRNYLYVRRRYPEK-LDAHVPEYAKRIVSQY 503
>gi|427701554|ref|YP_007044776.1| coenzyme F420-reducing hydrogenase subunit beta [Cyanobium gracile
PCC 6307]
gi|427344722|gb|AFY27435.1| coenzyme F420-reducing hydrogenase, beta subunit [Cyanobium gracile
PCC 6307]
Length = 406
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/405 (50%), Positives = 273/405 (67%), Gaps = 19/405 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
R++P+ G PAKD CS CGLCD+ ++A+V+ ACAFL R E +E HGR RR D
Sbjct: 17 RARPLAKGSPKPAKDLCSDCGLCDSRWVAYVRRACAFL---EQRFEAMEEQAHGRSRRLD 73
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
D+ Y GVH+ ++ AR +P+EGAQWTGIV+ I + L++G+V+AV+CVQ PDDR +P
Sbjct: 74 DEDELYFGVHQRMVTARLRQPIEGAQWTGIVSRIGVRALESGLVDAVLCVQQSPDDRFTP 133
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
PVLARTP+EVLAA+ KPTLSPNL L + +G++RLL GVGCQ+QALR+V+ L L
Sbjct: 134 VPVLARTPQEVLAARVNKPTLSPNLEVLEQLPGSGIERLLAIGVGCQIQALRAVQATLPL 193
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
+KLYVLG CVDN +R+GL FL++AS P+TV+HYEFMQD+++H +H DG E VP+F
Sbjct: 194 QKLYVLGLPCVDNVSRQGLQTFLESASRSPDTVVHYEFMQDFRIHFRHSDGQEETVPFFG 253
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L L DV APSC SCFDYTNA ADLVVGYMG T Q++TVRN G+E+L
Sbjct: 254 LDTPALKDVFAPSCLSCFDYTNAGADLVVGYMGA--------TFGRQWVTVRNPLGQELL 305
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
LV+ L++ P SSGDRR V + + A + A P ++ L+ F+ GPK
Sbjct: 306 DLVEPELDLAPVTSSGDRRQAVQQGIDAYEKALK-------LPMWLAELVGVFVQRFGPK 358
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
GLE+ R+S+D H RN L + R +K D H+P++A++IV Y
Sbjct: 359 GLEYGRFSIDSHFTRNALWLQRHHPEK-VDAHIPAFARRIVARYR 402
>gi|318040250|ref|ZP_07972206.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Synechococcus sp. CB0101]
Length = 404
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/405 (49%), Positives = 274/405 (67%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+R+KP+ G YPAKD CS+CGLCD+ ++A+VKD+CAFL R + +E HGR R
Sbjct: 15 ERAKPLAKGSVYPAKDLCSQCGLCDSRWVAYVKDSCAFLN---QRFDAMEAAAHGRSRDL 71
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GV + +L AR +P++GAQWTGIV+ I + L+TG+V+AV+CV DDR +
Sbjct: 72 DNEDELYFGVQQRMLTARLQQPLDGAQWTGIVSRIGVRALETGLVDAVLCVGQSEDDRFT 131
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P LARTPEEVL+A+ KPTLSPNL L + +G+KRLL GVGCQ+QALR+V+ L
Sbjct: 132 PVPRLARTPEEVLSARVNKPTLSPNLEVLEQLPGSGIKRLLAIGVGCQIQALRAVQPTLP 191
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
L++L+VLG CVDN +R+GL FL++ S P+TV+HYEFMQD+++H +H DG E VP+F
Sbjct: 192 LDELFVLGLPCVDNVSRQGLQTFLESTVSSPDTVVHYEFMQDFRIHFRHSDGREETVPFF 251
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L L DV APSC SCFDYTNA ADLVVGYMG T Q++TVRN +G+++
Sbjct: 252 GLDTPKLKDVFAPSCLSCFDYTNAGADLVVGYMGA--------TFGRQWLTVRNPKGQQL 303
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV+ L++ P SSG R+ V + ++A D A P +V NLI FF+ GP
Sbjct: 304 LDLVEAELDVAPVSSSGQRQAAVQQGIEAYDKAVK-------LPIWVANLIGFFVERFGP 356
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+ R+S+D H RN + + R K + H+P++A++I+ Y
Sbjct: 357 KGLEYGRFSIDSHFTRNAVWLRRHHPDK-VEAHIPAFARRIISRY 400
>gi|87303404|ref|ZP_01086192.1| hypothetical protein WH5701_10265 [Synechococcus sp. WH 5701]
gi|87282052|gb|EAQ74014.1| hypothetical protein WH5701_10265 [Synechococcus sp. WH 5701]
Length = 394
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/405 (49%), Positives = 273/405 (67%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+R++P+ G PA+D CS CGLCDT ++A+V+DACAFL G R+E L HGR R
Sbjct: 5 ERARPLAKGSVKPARDLCSECGLCDTGWVAYVRDACAFLTQGFDRMEEL---AHGRRRDL 61
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+ D+ Y GV+E +L AR P+EGAQWTGIV+ I + L++G+V+AV+CVQ PDDR +
Sbjct: 62 ANDDELYFGVYERMLTARLQPPIEGAQWTGIVSRIGVRALESGLVDAVLCVQQSPDDRFT 121
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P PVLARTPEEVLAA+ KPTLSPNL L + +G++RLL GVGCQ+QALR+V+ L
Sbjct: 122 PVPVLARTPEEVLAARVNKPTLSPNLEVLQQLPGSGIRRLLAIGVGCQIQALRAVQDTLP 181
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
L++LYVLG CVDN +R GL FL++AS +TV+HYEFMQD+++H +H DG E VP+F
Sbjct: 182 LDELYVLGMPCVDNVSRSGLQTFLESASRSADTVVHYEFMQDFRIHFRHSDGSEETVPFF 241
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L +L V APSC SCFDYTNA ADLVVGYMG + Q++ VRN +G+++
Sbjct: 242 GLDTPNLKSVFAPSCLSCFDYTNAGADLVVGYMGA--------SFGRQWLVVRNPKGQQL 293
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV+ L+ P S G+RR V + ++A D A P ++ ++ FF+N GP
Sbjct: 294 LDLVEAELDTAPVTSQGNRRAAVQQGIEAYDKAVK-------LPLWLAEVVGFFVNRFGP 346
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
KGLE+ R+S+D H RN + V R +AD+H+P++AK I+ Y
Sbjct: 347 KGLEYGRFSIDSHFTRNAIWVRRH-HPDQADRHIPAFAKAIISRY 390
>gi|88808927|ref|ZP_01124436.1| hypothetical protein WH7805_04526 [Synechococcus sp. WH 7805]
gi|88786869|gb|EAR18027.1| hypothetical protein WH7805_04526 [Synechococcus sp. WH 7805]
Length = 402
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/405 (49%), Positives = 269/405 (66%), Gaps = 19/405 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
+++PIP PAKD CS CGLCD+ ++A+V+ ACAFL +G+E HGR R D
Sbjct: 13 QARPIPRDRIRPAKDLCSDCGLCDSRWVAYVRQACAFLHQD---FDGMERKAHGRTRNLD 69
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
D+ Y GV + +L AR P++GAQWTGIV+ + + L++G+V+AV+CVQ PDDR +P
Sbjct: 70 QEDELYFGVQQRMLTARLQTPIDGAQWTGIVSRLGVRALESGLVDAVLCVQQSPDDRFTP 129
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
PVLARTP EVLAA+ KPTLS NL+ L + +G+KRLL GVGCQVQALR+V+ L L
Sbjct: 130 MPVLARTPAEVLAARVNKPTLSNNLSVLEQLPGSGIKRLLAIGVGCQVQALRAVQDTLPL 189
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
+ LYVLG CVDN +REGL FL++AS+ P+TV+HYEFMQD+++H +H DGH+E VP+F
Sbjct: 190 DALYVLGLPCVDNVSREGLQTFLESASASPDTVVHYEFMQDFRIHFRHSDGHVETVPFFG 249
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L L DV APSC SCFDY NA ADLVVGYMG Q++ VRN RG+E+L
Sbjct: 250 LDTPALKDVFAPSCLSCFDYVNAGADLVVGYMGAEFGR--------QWLVVRNSRGEELL 301
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
LV+ L+ P S GDRR V + + A D A P ++ L+ + + VGPK
Sbjct: 302 KLVEAELDQAPVSSRGDRRQAVQQGIDAYDKALR-------LPMWLAELVGWIVQRVGPK 354
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
GLE+ R+S+D H RN L + R + ++H+P++A++IVE Y
Sbjct: 355 GLEYGRFSIDSHFTRNALWLRRH-HPEMVERHLPAFARRIVERYR 398
>gi|148239886|ref|YP_001225273.1| coenzyme F420-reducing hydrogenase subunit beta [Synechococcus sp.
WH 7803]
gi|147848425|emb|CAK23976.1| Coenzyme F420-reducing hydrogenase, beta subunit [Synechococcus sp.
WH 7803]
Length = 402
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/405 (49%), Positives = 269/405 (66%), Gaps = 19/405 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
+++PIP PAKD CS CGLCD+ ++A+V+ ACAFL +G+E HGR R D
Sbjct: 13 QARPIPRDRIRPAKDLCSDCGLCDSRWVAYVRQACAFLHQDF---DGMERKAHGRARDLD 69
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
D+ Y GV + +L AR P+ GAQWTGIV+ + + L+TG+V+AV+CVQ PDDR +P
Sbjct: 70 QEDELYFGVQQRMLTARLQTPIAGAQWTGIVSRLGVRALETGLVDAVLCVQQSPDDRFTP 129
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
PVLARTPEEVLAA+ KPTLS NL+ L + +G+KRLL GVGCQVQALR+V+ L L
Sbjct: 130 MPVLARTPEEVLAARVNKPTLSNNLSVLEQLPGSGIKRLLAIGVGCQVQALRAVQDTLPL 189
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
E LYVLG CVDN +REGL FL++AS+ P+TV+HYEFMQD+++H +H DG +E VP+F
Sbjct: 190 EALYVLGLPCVDNVSREGLQTFLESASATPDTVVHYEFMQDFRIHFRHSDGRVETVPFFG 249
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L L DV APSC SCFDY NA ADLVVGYMG Q++ VRN RG+++L
Sbjct: 250 LDTPALKDVFAPSCLSCFDYVNAGADLVVGYMGAEFGR--------QWLVVRNSRGEDLL 301
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
LV+ L+ P +S GDRR V + + A D A P ++ ++ + + VGPK
Sbjct: 302 KLVEAELDQAPVMSRGDRRQAVQQGIDAYDKALR-------LPMWLAEVVGWIVQRVGPK 354
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
GLE+ R+S+D H RN L + R + ++H+P++A++IVE Y
Sbjct: 355 GLEYGRFSIDSHFTRNALWLRRH-HPEVVERHLPAFARRIVERYR 398
>gi|37520447|ref|NP_923824.1| hypothetical protein gll0878 [Gloeobacter violaceus PCC 7421]
gi|35211441|dbj|BAC88819.1| gll0878 [Gloeobacter violaceus PCC 7421]
Length = 391
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/400 (51%), Positives = 265/400 (66%), Gaps = 19/400 (4%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
P PA + CS CGLCDT Y+ + K ACAF+ M + LE+ HGR R D+ +
Sbjct: 7 PKPKNRPALELCSECGLCDTSYLRYAKWACAFITQHM---DELESKTHGRERDLDNEREL 63
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
Y GVH ++ ARK KPVEGAQWTGIV+TI + L++G+V+AV+CV +D DR +PRP+LA
Sbjct: 64 YFGVHRQMYAARKRKPVEGAQWTGIVSTIGVRALESGLVDAVLCVGADKIDRFTPRPLLA 123
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYV 233
RTPEEVLAA+ KPTLSPNL+ L + G+KRLL GVGCQ+QALR+V+ L LE LYV
Sbjct: 124 RTPEEVLAARVNKPTLSPNLSVLDEIPKLGIKRLLAIGVGCQIQALRTVQDKLGLEALYV 183
Query: 234 LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 293
LGT CVDN TR+GL FL + S P TV+HYEFMQD+++H KH DG IE+VP+F L
Sbjct: 184 LGTPCVDNVTRQGLQTFLDSTSRSPATVVHYEFMQDFRIHFKHEDGSIEKVPFFGLDTKA 243
Query: 294 LVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKN 353
L +V APSC SCFDY N LADLVVGYMG Q+I RNE+G+ +L LV++
Sbjct: 244 LKEVFAPSCLSCFDYVNGLADLVVGYMGA--------QFGWQWIVERNEKGRVLLDLVRD 295
Query: 354 LLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFA 413
LE T + SG R V + ++A D A P +V ++ I+ +GP+GLE+A
Sbjct: 296 ELEFTDIVESGKRFAAVQQGIEAYDKAVT-------LPMWVAKVMGAVIDKIGPRGLEYA 348
Query: 414 RYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
R+S+D H RNYL+V R + K D+H+P YAKKIV Y
Sbjct: 349 RFSIDSHFARNYLYVRRRYPGK-FDRHIPRYAKKIVSRYK 387
>gi|317970406|ref|ZP_07971796.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Synechococcus sp. CB0205]
Length = 405
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/404 (48%), Positives = 270/404 (66%), Gaps = 19/404 (4%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
R++P+ G TYPAKD CS+CGLCD+ ++A+VKD+CAFL R E +ET HGR R +
Sbjct: 16 RARPLAKGSTYPAKDLCSQCGLCDSRWVAYVKDSCAFLN---QRFEAMETAAHGRSRDLE 72
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+ D+ Y GV + +L AR +P++GAQWTGI + I + L++G+V+AV+CV DDR +P
Sbjct: 73 NEDELYFGVQQRMLTARLQQPIDGAQWTGIASRIGVLALESGLVDAVLCVGQSEDDRFTP 132
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
P LARTPEEVL+A+ KPTLSPNL L + +G+++LL GVGCQ+QALR+VE L L
Sbjct: 133 VPRLARTPEEVLSARVNKPTLSPNLEVLEQLPGSGIRKLLAIGVGCQIQALRAVESTLPL 192
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
++LYVLG C DN +REGL FL+ S PETV+HYEFMQD+++H +H DG E VP+F
Sbjct: 193 DQLYVLGLPCTDNVSREGLQTFLETTVSSPETVVHYEFMQDFRIHFRHSDGREETVPFFG 252
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
L L +V APSC SCFDYTNA ADLVVGYMG T Q++TVRN RG+++L
Sbjct: 253 LDTPKLKNVFAPSCLSCFDYTNAGADLVVGYMGA--------TFGRQWLTVRNPRGQQLL 304
Query: 349 SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
LV+ L++ P S G R+ V + ++A D A P ++ +I F+ GP+
Sbjct: 305 DLVEAELDVAPVTSRGQRQAAVQQGIEAYDKALK-------LPIWLAKIIGCFVGRFGPQ 357
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
GLE+ R+S+D H RN L + R +K + H+P++A++I+ Y
Sbjct: 358 GLEYGRFSIDSHFTRNALWLRRNHPEK-VEAHIPAFAQRIISRY 400
>gi|452822609|gb|EME29627.1| coenzyme F420 hydrogenase beta subunit [Galdieria sulphuraria]
Length = 485
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/402 (50%), Positives = 267/402 (66%), Gaps = 27/402 (6%)
Query: 59 YPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVH 118
YPAK CS CGLCDT +I +VKD+CAFL +S LE VHG+ R + ++ Y GVH
Sbjct: 98 YPAKSLCSHCGLCDTRFIHYVKDSCAFLNQHISE---LEYTVHGKSRDLEVENELYFGVH 154
Query: 119 EELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEE 178
++ AR+ +P+ GAQW+GIVT+IA +L+TG V+ +VCV++D DR P+PVLA TPEE
Sbjct: 155 LNMIAARRKQPLPGAQWSGIVTSIATRLLETGKVQGIVCVRNDEQDRFQPKPVLATTPEE 214
Query: 179 VLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNC 238
+ A++ KPTLSPNL+ L VEA+G R+ GVGCQV+ALRSV+ L LEKLYVLGT C
Sbjct: 215 IYASRVNKPTLSPNLSVLDTVEASGFTRIGVIGVGCQVEALRSVQSKLGLEKLYVLGTPC 274
Query: 239 VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI--------EEVPYFCLP 290
VDN TR+GLDKFL+ S+ P+TV+HYEFMQD++VH KH D + E VP+F L
Sbjct: 275 VDNVTRKGLDKFLRTTSTSPDTVVHYEFMQDFRVHFKHDDKVVGGPGKQWTETVPFFGLK 334
Query: 291 ANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSL 350
N+L D+ APSC SCFDY N+LADLVVGYMG P Q+I VRNE G EML L
Sbjct: 335 TNELKDIFAPSCLSCFDYVNSLADLVVGYMGAPF--------GWQWIVVRNEIGMEMLDL 386
Query: 351 VKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGL 410
V + +E P SSG+R V ++ A D P ++ L+ I+ +GPKGL
Sbjct: 387 VSSQIETMPLSSSGNRLQAVQNSIPAYDKG-------MTLPMWIAQLLGVVIDKLGPKGL 439
Query: 411 EFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
E+AR+S+D H RNYL++ R + +H+P YA++I+E Y
Sbjct: 440 EYARFSIDSHFTRNYLYMKRNF-PNILQRHVPEYARRIIEQY 480
>gi|116073059|ref|ZP_01470321.1| coenzyme F420 hydrogenase [Synechococcus sp. RS9916]
gi|116068364|gb|EAU74116.1| coenzyme F420 hydrogenase [Synechococcus sp. RS9916]
Length = 381
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/393 (50%), Positives = 262/393 (66%), Gaps = 19/393 (4%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
PAKD CS CGLCD+ ++A+V+ ACAFL EG+E HGR R D+ D+ Y GV +
Sbjct: 3 PAKDLCSDCGLCDSRWVAYVRQACAFL---HQDFEGMERRYHGRSRDLDNEDELYFGVQQ 59
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEV 179
+L AR +P+EGAQWTGIV+ + ++ LKTG+V+AV+CVQ PDDR +P PVLARTPEEV
Sbjct: 60 RMLTARLRQPIEGAQWTGIVSHLGVQALKTGLVDAVLCVQQSPDDRFTPMPVLARTPEEV 119
Query: 180 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCV 239
+AA+ KPTLS NL+ L + +G+KRLL GVGCQ+QALRSV+ L L++LYVLG CV
Sbjct: 120 MAARVNKPTLSNNLSVLEQLPGSGIKRLLAIGVGCQIQALRSVQDTLPLDELYVLGLPCV 179
Query: 240 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIA 299
DN +REGL+ FL +AS P+TV+HYEFMQD+++H +H DG E VP+F L L DV A
Sbjct: 180 DNVSREGLNTFLNSASDSPDTVVHYEFMQDFRIHFRHRDGREETVPFFGLDTPKLKDVFA 239
Query: 300 PSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITP 359
PSC SCFDYTNA ADLVVGYMG Q++ VRN RG ++L LV+ L+
Sbjct: 240 PSCLSCFDYTNAGADLVVGYMGAEFGR--------QWLVVRNARGAQLLKLVEADLDTAS 291
Query: 360 TISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDY 419
S GDRR V + + A D A P +V + + + +GPKGLE+ R+S+D
Sbjct: 292 VTSRGDRRAAVQQGIDAYDKAL-------KLPMWVAEAVGWVVQRIGPKGLEYGRFSIDS 344
Query: 420 HTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
H RN L V R + +H+P++A+KIVE Y
Sbjct: 345 HFTRNALWVRRNHSDQYT-RHLPAFARKIVERY 376
>gi|254432879|ref|ZP_05046582.1| coenzyme F420 hydrogenase [Cyanobium sp. PCC 7001]
gi|197627332|gb|EDY39891.1| coenzyme F420 hydrogenase [Cyanobium sp. PCC 7001]
Length = 381
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/395 (50%), Positives = 263/395 (66%), Gaps = 19/395 (4%)
Query: 59 YPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVH 118
YPAKD CS+CGLCD+ ++A+V+ +CAFL R E +E HGR R D+ D+ Y GVH
Sbjct: 2 YPAKDLCSQCGLCDSRWVAYVRQSCAFL---HQRFEAMEAAAHGRSRDLDNEDELYFGVH 58
Query: 119 EELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEE 178
+ ++ AR +P+EGAQWTGIV+ I + L+TG+V+AV+CV DR +P P LARTPEE
Sbjct: 59 QRMVTARLARPLEGAQWTGIVSRIGVRALETGLVDAVLCVGQSEHDRFTPVPRLARTPEE 118
Query: 179 VLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNC 238
VL+A+ KPTLSPNL L + +G++RLL GVGCQ+QALR+V+ L L+ LYVLG C
Sbjct: 119 VLSARVNKPTLSPNLEVLEQLPGSGIRRLLAIGVGCQIQALRAVQPTLPLDALYVLGLPC 178
Query: 239 VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVI 298
VDN +R GL FL++ S PETV+HYEFMQD+++H +H DG E VP+F L L DV
Sbjct: 179 VDNVSRAGLQTFLESTVSSPETVVHYEFMQDFRIHFRHSDGRTETVPFFGLDTPKLKDVF 238
Query: 299 APSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEIT 358
APSC SCFDYTNA ADLVVGYMG Q+ITVRN G+++L LV+ L++
Sbjct: 239 APSCLSCFDYTNAGADLVVGYMGAEFGR--------QWITVRNPLGQQLLDLVEPELDVA 290
Query: 359 PTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLD 418
P S GDRR V + ++A D A P+++ LI F+ GPKGLE+ R+S+D
Sbjct: 291 PVTSRGDRRAAVQQGIEAYDKAVK-------LPRWLAELIGVFVQRFGPKGLEYGRFSID 343
Query: 419 YHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
H RN L V R +K A+ H+P++A++IV Y
Sbjct: 344 SHFTRNALWVRRHHPEK-AEAHIPAFARRIVSRYR 377
>gi|423065981|ref|ZP_17054771.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Arthrospira platensis C1]
gi|406712480|gb|EKD07665.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Arthrospira platensis C1]
Length = 330
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/326 (58%), Positives = 234/326 (71%), Gaps = 11/326 (3%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + PG PAK CS CGLCDTYYI +VK+ACAFL + +I LE HGR R
Sbjct: 11 QKAKALKPGSRRPAKALCSECGLCDTYYIHYVKEACAFLNE---QIANLEEQAHGRSRNL 67
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ DD Y GVH++++ ARK +P+ GAQWTGIV+TIA EML +VE VVCVQ+ +DR
Sbjct: 68 DNSDDLYFGVHQDMMAARKKEPIPGAQWTGIVSTIACEMLNQSIVEGVVCVQNTKEDRFG 127
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P+LARTPEEVLAA+ KPTLSPNL+ L VE +G+K+LL GVGCQ+QALR+VE +
Sbjct: 128 PMPILARTPEEVLAARVNKPTLSPNLSVLEEVERSGMKKLLVIGVGCQIQALRAVEKQMG 187
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD++VH KH DG E VP+F
Sbjct: 188 LEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVHYEFMQDFRVHFKHEDGSTETVPFF 247
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L N L D+ APSC SCFDY N+LADLVVGYMG P Q+I VRN+RG+EM
Sbjct: 248 GLKTNQLKDIFAPSCLSCFDYVNSLADLVVGYMGAPFGW--------QWIVVRNDRGQEM 299
Query: 348 LSLVKNLLEITPTISSGDRRPFVMET 373
L L+++ L+ P S GDRR V ++
Sbjct: 300 LDLIQDQLDTQPVSSQGDRRAAVQQS 325
>gi|194477230|ref|YP_002049409.1| hypothetical protein PCC_0785 [Paulinella chromatophora]
gi|171192237|gb|ACB43199.1| hypothetical protein PCC_0785 [Paulinella chromatophora]
Length = 404
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/405 (48%), Positives = 271/405 (66%), Gaps = 19/405 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+R++P+ G PAKD CS CGLCD+ ++A+V+ AC FL R E +E HGR R
Sbjct: 15 ERTRPLSKGKVKPAKDLCSECGLCDSRWVAYVRHACPFLNQ---RFETMELETHGRIRNL 71
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ + Y GVH +L AR KP+ GAQWTGIV+ + I+ LKTG+V+AV+CVQ DR +
Sbjct: 72 DNEKELYFGVHNRMLTARLKKPIAGAQWTGIVSQLGIQALKTGLVDAVLCVQQGEQDRFT 131
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P P+LARTPEEVLAA+ K TLSPNL L + +G+K+LL GVGCQVQALR+V+ L
Sbjct: 132 PVPILARTPEEVLAARVNKATLSPNLEALEQLSGSGIKKLLAIGVGCQVQALRAVQSTLP 191
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
L++LYVLG CVDN +R GL FL++ S P TV+HYEFMQD+ +H H +G E + +F
Sbjct: 192 LDELYVLGMPCVDNVSRTGLQTFLESTSKSPNTVVHYEFMQDFYIHFHHSNGSKETISFF 251
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L + D+ APSC SCFDY NA ADLV+GYMG K+ Q++TVRN RG+++
Sbjct: 252 GLDTPKVKDIFAPSCLSCFDYVNAGADLVIGYMGA-KFGY-------QWLTVRNTRGEKL 303
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
LSL+++ L+I P SSGDR V + + A + A P ++ +L+A+++ +GP
Sbjct: 304 LSLIESQLDILPVDSSGDRHSAVQQGIDAYNKA-------LKLPIWIASLVAWWVKYIGP 356
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
+GLE++R+S+D H RN L + R +K A++H+P++AKKIV Y
Sbjct: 357 QGLEYSRFSIDSHFTRNALWLWRHHSEK-AEQHIPAFAKKIVSRY 400
>gi|255635378|gb|ACU18042.1| unknown [Glycine max]
Length = 199
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 175/199 (87%), Positives = 195/199 (97%)
Query: 267 MQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYT 326
MQDYK+HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKY+
Sbjct: 1 MQDYKIHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYS 60
Query: 327 GISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGP 386
GI MTQHPQY+TVRNERG+EMLSL++NLLEITPTIS+GDRRPFVMETVKADD AK+GRGP
Sbjct: 61 GIGMTQHPQYVTVRNERGREMLSLIENLLEITPTISTGDRRPFVMETVKADDEAKLGRGP 120
Query: 387 SQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAK 446
SQPAPKF+GNL+AF +NL+GPKGLEFARYSLDYHTIRNYLHVNR WGK+RAD+HMP+YAK
Sbjct: 121 SQPAPKFIGNLLAFILNLIGPKGLEFARYSLDYHTIRNYLHVNRMWGKERADRHMPTYAK 180
Query: 447 KIVEMYNQNGQIDQMLSSK 465
KIV++YNQNGQI++MLS+K
Sbjct: 181 KIVDLYNQNGQIEKMLSNK 199
>gi|148241873|ref|YP_001227030.1| coenzyme F420-reducing hydrogenase subunit beta [Synechococcus sp.
RCC307]
gi|147850183|emb|CAK27677.1| Coenzyme F420-reducing hydrogenase, beta subunit [Synechococcus sp.
RCC307]
Length = 397
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/406 (48%), Positives = 269/406 (66%), Gaps = 19/406 (4%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++KP+ G PAKD CS CGLCD+ ++A+V+ ACAF+ + E LE HGR R
Sbjct: 7 QKAKPMARGTLRPAKDLCSDCGLCDSRWVAYVRQACAFI---HQQFESLERKAHGRSRDL 63
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GV E + A+ +P+EGAQWTGIV+T+ + L+ +V+AV+CVQ P+DR +
Sbjct: 64 DNEDELYFGVTERMFCAQLQQPLEGAQWTGIVSTLGVRALEQNLVDAVLCVQQSPEDRFT 123
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN 227
P PVLARTP+EVLAA+ KPTLS NL+ L + +G+KRLL GVGCQ QALR+V+ L
Sbjct: 124 PMPVLARTPQEVLAARVNKPTLSNNLSVLEQLPGSGIKRLLAIGVGCQTQALRAVQDSLG 183
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
LE+LYVLG CVDN +REGL FL++ S PETV+HYEFMQD+++H +H DG E VP+F
Sbjct: 184 LEELYVLGMPCVDNVSREGLQTFLESTSRSPETVVHYEFMQDFRIHFRHSDGSTETVPFF 243
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
L L DV APSC SCFDY NA ADLVVGYMG P Q++ VRN+RG+++
Sbjct: 244 GLDTPKLKDVFAPSCLSCFDYVNACADLVVGYMGAPF--------QWQWLVVRNQRGQKL 295
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGP 407
L LV+ L+ P +SSG R V + + A D A P+++ ++ + VGP
Sbjct: 296 LDLVEAELKTQPVMSSGQRAQAVQQGIDAYDKALR-------LPRWLAEVVGVVVQRVGP 348
Query: 408 KGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
KGLE+AR+S+D H RN + R +K A +H+P++A+KIV Y
Sbjct: 349 KGLEYARFSIDSHFTRNATWLRRHHPEKLA-QHLPAFAQKIVSRYR 393
>gi|87124766|ref|ZP_01080614.1| hypothetical protein RS9917_01052 [Synechococcus sp. RS9917]
gi|86167645|gb|EAQ68904.1| hypothetical protein RS9917_01052 [Synechococcus sp. RS9917]
Length = 386
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/398 (48%), Positives = 262/398 (65%), Gaps = 19/398 (4%)
Query: 56 GGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYL 115
G PA+D CS CGLCD+ ++A+VK ACAFL E +E HGR R D D+ Y
Sbjct: 4 GTVRPARDLCSDCGLCDSRWVAYVKRACAFLHQDF---EAMERRSHGRSRDLDQEDELYF 60
Query: 116 GVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLART 175
GVHE ++ AR P++GAQWTGIV+ + + L+ G+V+AV+CVQ P+DR +P PVLART
Sbjct: 61 GVHERMVTARMRAPIDGAQWTGIVSHLGAKALERGLVDAVLCVQQSPEDRFTPVPVLART 120
Query: 176 PEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLG 235
PEEV+AA+ KPTLS NL+ L + +G++ LL GVGCQ+QALR+VE L L+ LYVLG
Sbjct: 121 PEEVMAARVNKPTLSNNLSVLEQLPGSGIRNLLAIGVGCQIQALRAVEDTLPLDALYVLG 180
Query: 236 TNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLV 295
CVDN +R+GL FL++AS PETV+HYEFMQD+++H +H DG E VP+F L L
Sbjct: 181 LPCVDNVSRQGLQTFLESASDSPETVVHYEFMQDFRIHFRHRDGRQETVPFFGLDTPRLK 240
Query: 296 DVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLL 355
DV APSC SCFDY NA ADLVVGYMG +Y Q++ VRN+RG +L L++ L
Sbjct: 241 DVFAPSCLSCFDYVNAGADLVVGYMGA-EYGR-------QWLVVRNQRGAALLDLIEADL 292
Query: 356 EITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARY 415
++ P S GDRR V + + A D A P ++ L+ + + +GPKGLE+ R+
Sbjct: 293 DLAPVTSRGDRRAAVQQGIDAYDKAVR-------LPMWLAELVGWVVQRIGPKGLEYGRF 345
Query: 416 SLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
S+D H RN L + R + D+H+P++A++IVE Y
Sbjct: 346 SIDSHFTRNALWLRRH-HPEVVDRHLPAFARRIVERYR 382
>gi|254422838|ref|ZP_05036556.1| Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminal
domain family protein [Synechococcus sp. PCC 7335]
gi|196190327|gb|EDX85291.1| Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminal
domain family protein [Synechococcus sp. PCC 7335]
Length = 353
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/362 (52%), Positives = 243/362 (67%), Gaps = 16/362 (4%)
Query: 91 SRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTG 150
++ LE HGR R D++D+ Y GVH++++ ARK P+EGAQWTGIV+T+AIEML G
Sbjct: 3 QQVSDLEAANHGRARDLDNVDELYFGVHQKMVAARKLAPIEGAQWTGIVSTLAIEMLDRG 62
Query: 151 MVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFC 210
+VE VVCVQ+ DDR P PV+ARTPEE+LAA+ KPTLSPNL+ L +E +G+KR+L
Sbjct: 63 LVEGVVCVQNTEDDRFQPMPVIARTPEEILAARVNKPTLSPNLSVLDQIERSGMKRVLVI 122
Query: 211 GVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDY 270
GVGCQ+QALR+V+ + LEKLYVLG CVDN TR GL KFL+ S PETV+ YEFMQD+
Sbjct: 123 GVGCQIQALRAVQDQIGLEKLYVLGMPCVDNVTRAGLQKFLETTSRSPETVVAYEFMQDF 182
Query: 271 KVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISM 330
+VH KH DG E+VP+F L N L DV APSC SCFDYTN+LAD+VVGYMG P
Sbjct: 183 QVHFKHEDGSEEKVPFFGLKTNKLKDVFAPSCMSCFDYTNSLADIVVGYMGAPFGW---- 238
Query: 331 TQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPA 390
Q+I VRNE G +M L+ ++E P SSGDR V ++ A D
Sbjct: 239 ----QWIVVRNETGAQMFELLDGIIETQPVESSGDRTQAVQNSIPAYDKGVT-------L 287
Query: 391 PKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVE 450
P + L+ I +GPKGLE+AR+S+D H RNYL+ R +K A H+P +AK+IV
Sbjct: 288 PMWAAKLMGVVIEKIGPKGLEYARFSIDSHFTRNYLYTRRNHPEKLA-AHVPEFAKRIVG 346
Query: 451 MY 452
Y
Sbjct: 347 QY 348
>gi|223996811|ref|XP_002288079.1| hypothetical protein THAPSDRAFT_14482 [Thalassiosira pseudonana
CCMP1335]
gi|220977195|gb|EED95522.1| hypothetical protein THAPSDRAFT_14482 [Thalassiosira pseudonana
CCMP1335]
Length = 419
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 205/426 (48%), Positives = 266/426 (62%), Gaps = 39/426 (9%)
Query: 59 YPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSR-IEGLETVVHGRGRR----------K 107
+PAK+HCS+CGLC+T Y+ HV DACAFLG+GM R I+G+E VHGR R
Sbjct: 1 FPAKNHCSKCGLCETKYVTHVIDACAFLGEGMKRNIDGMEERVHGRRRNLNDFMSNNDDN 60
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
++ D+ GV + + K + AQWTG VT IA+ ML+ GMV+AVVC+ S DD S
Sbjct: 61 NTADEARFGVMHSPMVLARGKQIPNAQWTGCVTGIAVSMLEAGMVDAVVCIASSGDDGWS 120
Query: 168 -PRPVLARTPEEVLAAKGVKPTLSPNLNTLALVE-AAGVKRLLFCGVGCQVQALRSVEHH 225
P P+LART EEV+ +GVKP L+P+L L +E + VKRLLFCGVGC VQA R++EH
Sbjct: 121 NPEPILARTVEEVIRGRGVKPALAPSLRVLEELERSTDVKRLLFCGVGCAVQAFRAIEHE 180
Query: 226 LNLEKLYVLGTNCVDN-----GTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDG- 279
L LE++YVLGTNC DN RE L + + S E +T+L YEFMQD++VH+K+ +G
Sbjct: 181 LPLEEVYVLGTNCADNSPTPEAAREFLRRIVPDVSRE-KTILGYEFMQDFRVHVKY-EGI 238
Query: 280 ----HIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQ 335
E +PYF LP + I+ SC +CFDYTNALAD+VVGYM P + SM Q Q
Sbjct: 239 NKILSYERLPYFSLPGDVAEFAISDSCLACFDYTNALADVVVGYMAAPLDSN-SMEQSYQ 297
Query: 336 YITVRNERGKEMLSLVKNLLEI------TPTISSGDRRPFVMETVKADDNAKM---GRGP 386
ITVRN RG+ M V++ LE + SG FV TV AD+ + G
Sbjct: 298 TITVRNSRGELM---VQSALEAGRLTLGSVATGSGSHESFVSATVSADNVVQAMVGGELK 354
Query: 387 SQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAK 446
++ P+FVGN++A + VGPKG+ FARYSLDYH +RNYLHV WG+ +P YA
Sbjct: 355 TEGMPRFVGNIVASVMRAVGPKGVNFARYSLDYHLLRNYLHVIDEWGEG-GKSMVPEYAT 413
Query: 447 KIVEMY 452
IV+ Y
Sbjct: 414 TIVKKY 419
>gi|219113003|ref|XP_002186085.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582935|gb|ACI65555.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 536
Score = 361 bits (927), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 195/420 (46%), Positives = 267/420 (63%), Gaps = 22/420 (5%)
Query: 52 PIPPGG---TYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
PI P G +PAK+HCS+CGLC+T Y+A VK+ACAFL GMSRI+ LET VHGR RRK
Sbjct: 102 PIDPEGRPYKFPAKEHCSKCGLCETSYVARVKEACAFLEPGMSRIDTLETKVHGR-RRKT 160
Query: 109 SLDDTYL-------GVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSD 161
+ D T + GV + L + + GAQWTG+V++IAI ML+T V+AV CV S+
Sbjct: 161 TDDKTIVQADERRFGVQYQPLRLARGISMPGAQWTGVVSSIAISMLETRQVDAVACVASN 220
Query: 162 PDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEA-AGVKRLLFCGVGCQVQALR 220
+ +P P+LA+T +EVL +GVKP+L+P+LN L V+ ++RLLFCGVGC VQALR
Sbjct: 221 EETWSNPNPILAQTTDEVLKGRGVKPSLAPSLNILDEVKNDPSIRRLLFCGVGCSVQALR 280
Query: 221 SVEHHLNLEKLYVLGTNCVDNGTREGLDKFL--KAASSEPETVLHYEFMQDYKVHLKHLD 278
S+E+ L +E +++LGTNCVDN G K A ++V YEFMQD++VH+K +
Sbjct: 281 SIENELGIE-IFILGTNCVDNSPSPGAAAAFIEKGAKVFSDSVRGYEFMQDFRVHVKTEE 339
Query: 279 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 338
++ +PYFCLP IA SC SCFDYTNALAD+VVGYM P M + Q +T
Sbjct: 340 TYL-TIPYFCLPGTIAESSIAKSCRSCFDYTNALADVVVGYMAAPLDGKSRMDESWQTVT 398
Query: 339 VRNERGKEML--SLVKNLLEITPTI-SSGDRRPFVMETVKADDNAKM---GRGPSQPAPK 392
VRNERG +M+ ++ + LE+ + SGD + + T K+D + G+ P
Sbjct: 399 VRNERGNQMVETAITQGRLEVGDIVRGSGDHQQLAIATTKSDALVQAMVGGKVQENGMPL 458
Query: 393 FVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
++GN++A + V KG+ FARYS+DYH +RNY HV WG+ RA P +A +IV+ Y
Sbjct: 459 WLGNIMATVLRKVSAKGIAFARYSIDYHIVRNYFHVLNEWGEHRARSSTPQFALEIVDEY 518
>gi|397613578|gb|EJK62303.1| hypothetical protein THAOC_17090 [Thalassiosira oceanica]
Length = 472
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 202/434 (46%), Positives = 269/434 (61%), Gaps = 29/434 (6%)
Query: 50 SKPIPPGG---TYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSR-IEGLETVVHGRGR 105
S+PI P G +PAKDHCSRCGLC+T Y+++V DACAF+ GM R I+GLE VHGR R
Sbjct: 30 SRPINPDGWPEKFPAKDHCSRCGLCETSYVSNVLDACAFINGGMKRNIDGLEETVHGRTR 89
Query: 106 RKDSLDDTYLGVHEELLYARKTKP-------VEGAQWTGIVTTIAIEMLKTGMVEAVVCV 158
D+ + + EE + ++P V GAQWTG V++IA+ ML++ V+AVVC+
Sbjct: 90 CIDNSINGDDSIAEERRFGVMSRPMMLGRGKVAGAQWTGAVSSIAVSMLESKKVDAVVCI 149
Query: 159 QSDPDDRLS-PRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQV 216
+ D S P P+LART ++VL +GVKP L+P+L L L +K+LL+CGVGC V
Sbjct: 150 ATGSDGGWSNPEPILARTVDDVLRGRGVKPALAPSLRILDELKSDESIKKLLYCGVGCSV 209
Query: 217 QALRSVEHHLNLEKLYVLGTNCVDNG-TREGLDKFLKAA--SSEPETVLHYEFMQDYKVH 273
QA R++E L L+K+YVLGT C DN T + FLK S VL YEFMQD++VH
Sbjct: 210 QAFRAIEDELGLDKVYVLGTACADNSPTPKAARDFLKKGIPSIGDSNVLAYEFMQDFRVH 269
Query: 274 LKHLDGH---IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISM 330
+K D +++PYF L + IA SC +CFDYTNALAD+VVGYMG P M
Sbjct: 270 VKVGDEKSPSYKKLPYFSLEPSVAEFAIADSCLACFDYTNALADVVVGYMGAPLVD--DM 327
Query: 331 TQHPQYITVRNERGKEML--SLVKNLLEITPTI-SSGDRRPFVMETVKADDNA--KMGRG 385
++ Q ITVRN RG+EM+ ++ LE+ T G F M TV A+DN KM G
Sbjct: 328 DRNMQTITVRNNRGEEMIRCAIDGERLELGGTARGEGTHEKFAMSTV-ANDNLVNKMTGG 386
Query: 386 --PSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPS 443
+ P FVGN+IA +GPKG+ FARYS+DYH +RNYLH R +G+ RAD +P
Sbjct: 387 DVKEKGMPPFVGNIIASIATKLGPKGVAFARYSIDYHILRNYLHCLREFGRDRADTMIPE 446
Query: 444 YAKKIVEMYNQNGQ 457
Y + I++ Y ++ Q
Sbjct: 447 YTRVIIKEYEESDQ 460
>gi|440755865|ref|ZP_20935066.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunit family
protein [Microcystis aeruginosa TAIHU98]
gi|440173087|gb|ELP52545.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunit family
protein [Microcystis aeruginosa TAIHU98]
Length = 295
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/307 (55%), Positives = 209/307 (68%), Gaps = 16/307 (5%)
Query: 146 MLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVK 205
ML G+VE VVCVQ+ +DR P+P+LART EE+LAAK KPTLSPNL+ L +E +G+K
Sbjct: 1 MLDRGLVEGVVCVQNTAEDRFQPQPILARTTEEILAAKVNKPTLSPNLSVLEEIEKSGMK 60
Query: 206 RLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYE 265
RLL GVGCQ+QALR+VE L LEKLYVLGT CVDN TR GL KFL+ S PETV+HYE
Sbjct: 61 RLLVIGVGCQIQALRAVEKKLGLEKLYVLGTPCVDNVTRSGLQKFLETTSRSPETVVHYE 120
Query: 266 FMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKY 325
FMQD++VH KH DG +E VP+F L N L DV APSC +CFDY N+LADLVVGYMG P
Sbjct: 121 FMQDFRVHFKHEDGSMEMVPFFGLKTNKLKDVFAPSCMTCFDYVNSLADLVVGYMGAPF- 179
Query: 326 TGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRG 385
Q+I VRN+ GKEML LVK+ L +SSGDR+ V ++ A D
Sbjct: 180 -------GWQWIVVRNDTGKEMLELVKDQLNTQDVMSSGDRKQAVQNSIPAYDKGVT--- 229
Query: 386 PSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYA 445
P + ++ I +GPKGLE+AR+S+D H RNYL+V R + +K A H+P YA
Sbjct: 230 ----LPMWAAKMMGVVIEKIGPKGLEYARFSIDSHFTRNYLYVKRNYPEKLA-AHVPEYA 284
Query: 446 KKIVEMY 452
KKIVE Y
Sbjct: 285 KKIVEQY 291
>gi|147799603|emb|CAN75143.1| hypothetical protein VITISV_038427 [Vitis vinifera]
Length = 240
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/167 (87%), Positives = 160/167 (95%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
KSVKLR+DWR+RS+PIPPGGTYPAKDHCSRCGLCDTYYIAHVK+ACAFLGDGMS+IE LE
Sbjct: 30 KSVKLRDDWRQRSRPIPPGGTYPAKDHCSRCGLCDTYYIAHVKNACAFLGDGMSKIESLE 89
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
+VHGRGR+ SLD+TYLGV+E+LLYARKT+PVEGAQWTGIVTTIAIEMLK GMVEAV+C
Sbjct: 90 PLVHGRGRKDYSLDETYLGVYEQLLYARKTEPVEGAQWTGIVTTIAIEMLKAGMVEAVIC 149
Query: 158 VQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGV 204
VQSDP+DRLSPRPVLARTP+EVLAAKGVKPTLSPNLNTLALVE GV
Sbjct: 150 VQSDPEDRLSPRPVLARTPDEVLAAKGVKPTLSPNLNTLALVEIDGV 196
>gi|556606|gb|AAA50354.1| ORF, partial [Nostoc sp. PCC 7120]
Length = 265
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 147/264 (55%), Positives = 186/264 (70%), Gaps = 10/264 (3%)
Query: 48 KRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRK 107
+++K + P PAK+ CS CGLCDTYYI +VK+ACAF+ +I+ LE R R
Sbjct: 8 QKAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFI---TQQIDTLEEQARQRSRNL 64
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D+ D+ Y GVH++++ A+K +P+ GAQWTGIV++IAIEML G+VE VVCVQ+ +DR
Sbjct: 65 DNPDELYFGVHQDMIAAKKQQPIAGAQWTGIVSSIAIEMLNHGLVEGVVCVQNSKEDRFQ 124
Query: 168 PRPVLARTPEEVLAAKGVKPTLS---PNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEH 224
P PV+ARTP ++ KPTLS P N+ +G+KRLL GVGCQ+QALR+VE
Sbjct: 125 PMPVIARTPRRNTSSCVNKPTLSQTFPYWNS----RKSGMKRLLVIGVGCQIQALRAVEK 180
Query: 225 HLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 284
L LEKLYVLGT CVDN TR GL KFL+ S PETV+HYEFMQD+++H KH DG IE+V
Sbjct: 181 KLGLEKLYVLGTPCVDNVTRAGLQKFLETTSRSPETVVHYEFMQDFRIHFKHEDGSIEKV 240
Query: 285 PYFCLPANDLVDVIAPSCYSCFDY 308
P+F L N L DV APSC SCFDY
Sbjct: 241 PFFGLKTNQLKDVFAPSCMSCFDY 264
>gi|381160641|ref|ZP_09869873.1| coenzyme F420-reducing hydrogenase, beta subunit [Thiorhodovibrio
sp. 970]
gi|380878705|gb|EIC20797.1| coenzyme F420-reducing hydrogenase, beta subunit [Thiorhodovibrio
sp. 970]
Length = 453
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 228/422 (54%), Gaps = 42/422 (9%)
Query: 32 PSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMS 91
P+K + L +D R R +P CS CGLCD+ + + +C F+
Sbjct: 43 PAKGLREPTLLSKDERLRGRP----------KLCSDCGLCDSQFKPLMASSCTFV---RQ 89
Query: 92 RIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGM 151
+ +E +HGR RR+ D+ G+ + AR +P GAQW+G+VT++ +L+TG
Sbjct: 90 HVPEIEQRLHGRERREG--DELRFGIFRAMYGARMRQPASGAQWSGMVTSLGAALLETGQ 147
Query: 152 VEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCG 211
VE V+ + P R +PRPVLARTP+ V A+ G KP LSPNL L V AAG+KRL F G
Sbjct: 148 VEGVITAAAAPGTRFAPRPVLARTPDAVRASAGNKPCLSPNLALLDEVRAAGIKRLAFIG 207
Query: 212 VGCQVQALRSVE----HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFM 267
GCQVQ LR+ E + LE L V+G C DN T L FL S PET++HYEFM
Sbjct: 208 TGCQVQILRAAEPQLREQMGLEHLDVIGIPCSDNVTYPDLQFFLTQVSRSPETIVHYEFM 267
Query: 268 QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTG 327
QDY++ ++H DG IE V + P + L V +C SCFDY N+LAD+ +GYMG
Sbjct: 268 QDYRLWMRHDDGDIERVNFIDFPMDKLDGVFPSACLSCFDYANSLADITIGYMGA----- 322
Query: 328 ISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPS 387
Q++ VR ERG+ ML L+K LE S+GDR + ++ + P
Sbjct: 323 ---RLGWQWVLVRTERGQAMLDLIKPQLEFRELDSAGDRNRGMPRYIRM-----LAEPPG 374
Query: 388 QPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKK 447
+P PK + LIAF GP+GLEFAR ++ +RN ++ H P + ++
Sbjct: 375 KP-PKPIRRLIAFLQRRRGPRGLEFARAVIEMKLLRNLQYLR---------SHFPRFEQR 424
Query: 448 IV 449
+V
Sbjct: 425 VV 426
>gi|347756039|ref|YP_004863602.1| Coenzyme F420-reducing hydrogenase subunit beta [Candidatus
Chloracidobacterium thermophilum B]
gi|347588556|gb|AEP13085.1| Coenzyme F420-reducing hydrogenase, beta subunit [Candidatus
Chloracidobacterium thermophilum B]
Length = 433
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/394 (39%), Positives = 233/394 (59%), Gaps = 18/394 (4%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
CS CG+C + HVK+ACAFL + + + LE V G RR + D+ Y G ++++L
Sbjct: 20 CSDCGICTSSLRPHVKEACAFL---VQKYDELELTVQGHARRAGT-DEVYFGPYKKILRV 75
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG 184
R+ +P+ GAQWTG+VTTIA+ L+ G+VE V+ ++P P+PVLARTPEEVLA +G
Sbjct: 76 RRQRPIAGAQWTGVVTTIAMRALEQGLVEGVILTGTEPGTLNKPQPVLARTPEEVLACRG 135
Query: 185 VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTR 244
K LSP L + AAG+KR++ G CQ ALR +E L ++L+ LG C DN T
Sbjct: 136 NKFGLSPTLEKIDDAIAAGLKRVMVVGTPCQFHALRVIESTLPFDELWCLGILCSDNTTH 195
Query: 245 EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVIAPSCY 303
E FLK+ S P+TV+H EFM D+++ ++H +G +E++ + +P +++ D+IAPSC
Sbjct: 196 ENYMTFLKSVSRSPDTVVHMEFMPDFRLWMRHTNGEVEKLNFVEIPMHEIGPDLIAPSCR 255
Query: 304 SCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISS 363
CF+YTN+LADL VGYMG Q++ +RN +G +L L+++ +E++ S
Sbjct: 256 VCFNYTNSLADLSVGYMG-------GGMPDNQWLLIRNAKGWRLLDLIRDDVELSEPTES 308
Query: 364 GDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIR 423
G R M+ +++G+ ++ AP+ V LIAF GP+GLEFAR ++
Sbjct: 309 GS-RALAMKGFL----SQLGKPYTKGAPRPVKKLIAFLQRRFGPRGLEFARTRVEMKLAE 363
Query: 424 NYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 457
V R G + A +P YA +E Y G+
Sbjct: 364 GLFTVRRKAGHREA-LLVPRYAYVPLEKYVLPGE 396
>gi|163848106|ref|YP_001636150.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Chloroflexus
aurantiacus J-10-fl]
gi|222526003|ref|YP_002570474.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Chloroflexus sp. Y-400-fl]
gi|10198145|gb|AAG15211.1|AF288460_4 FrhB [Chloroflexus aurantiacus]
gi|163669395|gb|ABY35761.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chloroflexus aurantiacus J-10-fl]
gi|222449882|gb|ACM54148.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chloroflexus sp. Y-400-fl]
Length = 429
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 151/391 (38%), Positives = 221/391 (56%), Gaps = 19/391 (4%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
CS CG+C + +C F+ + R E +E +HGR RR D+ G++ +L
Sbjct: 38 CSDCGICTGELRPFMAQSCVFVNN---RAEEIERRLHGRNRRDG--DELLFGIYRDLRVF 92
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG 184
R PV AQW+G VT++ +L+ G+VE V+ + P R +P P+LARTP+EV A +G
Sbjct: 93 RMRPPVPDAQWSGAVTSLGALLLEHGLVEGVITTGAVPGTRYAPLPILARTPDEVRATRG 152
Query: 185 VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTR 244
KP L+P L+ L V +G++R+ + G GCQV ALR++E L LE+LYV+G C DN T
Sbjct: 153 NKPCLAPTLDVLTQVRQSGLRRIAYIGTGCQVHALRAIEDQLGLERLYVIGIPCTDNTTY 212
Query: 245 EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL---VDVIAPS 301
L +FL+ S PETV+H+EFMQD+++ LKH DG +E+V + L + L + V P+
Sbjct: 213 PDLQRFLQVVSRSPETVIHHEFMQDFRIWLKHEDGSVEKVNFVDLDVDRLGGQLGVFPPA 272
Query: 302 CYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTI 361
C SCFDY N L+DL +GYMG P + + Q+ +R ERG E+ L+++ +E I
Sbjct: 273 CLSCFDYQNGLSDLTIGYMGAP----LPPDERWQWTLIRTERGAELYDLLRSHVEEREPI 328
Query: 362 SSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHT 421
S GDR T +M R P + P + L+AF GPKGLEFAR ++
Sbjct: 329 SGGDR------TRGMPAYIQMLRQPRKRPPWPIRQLVAFIQRRSGPKGLEFARSVIEMKL 382
Query: 422 IRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
+RN V G+ + +P Y + + Y
Sbjct: 383 LRNLQFVRERHGRL-ERRIVPGYVYRALARY 412
>gi|193214920|ref|YP_001996119.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Chloroherpeton thalassium
ATCC 35110]
gi|193088397|gb|ACF13672.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chloroherpeton thalassium ATCC 35110]
Length = 418
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/399 (39%), Positives = 232/399 (58%), Gaps = 19/399 (4%)
Query: 65 CSRCGLCD--TYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
CS CGLC ++ +C F + + GLE+ + GR R +S +++ G+ ++
Sbjct: 24 CSSCGLCSVKSWPAKESIQSCVF---RVGWLGGLESELFGRERNPNSFEESRFGITKKRF 80
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
A+ P+ AQW+GI+T I + L++G VE VV VQ+ DD P+PVLA + +V A
Sbjct: 81 VAQLKNPIPHAQWSGIITRICTKALESGFVEGVVAVQNSQDDIFVPKPVLATSTADVFKA 140
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSV---EHHLNLEKLYVLGTNCV 239
KG KP L+P L +L +KRLL G C V LR +L ++YVLG C
Sbjct: 141 KGNKPALAPALLSLGEAYEKKLKRLLVVGAPCHVHILRDFVKRSPYLKDAEIYVLGIPCT 200
Query: 240 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAN-DLVDVI 298
DN E L L+ SS +T+ HYEFMQD++VHLKH +G IE+VPYF LP + V
Sbjct: 201 DNVKPEKLRWILERISSSHQTLCHYEFMQDFQVHLKHDNGRIEKVPYFSLPQELSQIGVF 260
Query: 299 APSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEIT 358
APSC SCFDY N+L+DL VGY+G P + Q++ +R E+G+E+L V++ L+
Sbjct: 261 APSCMSCFDYVNSLSDLTVGYLGAP----FMPNEKRQWVLLRTEKGEELLKFVEDELDTY 316
Query: 359 PTISSGDRRPFV-METVKADDNAKMG-RGPSQPA---PKFVGNLIAFFINLVGPKGLEFA 413
P +SGD R V M + + K+G + P++ P +VG LI + ++ GPKGLEFA
Sbjct: 317 PEETSGDAREAVKMNVERTIEQLKLGNKAPAKTGRRIPIWVGKLITYMMSKKGPKGLEFA 376
Query: 414 RYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
RY++D+H +RNY +V + +K + +P + K++E Y
Sbjct: 377 RYTIDFHILRNYYYVKLFYPEK-FETIVPKHVYKVLEEY 414
>gi|288940912|ref|YP_003443152.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Allochromatium vinosum DSM
180]
gi|288896284|gb|ADC62120.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Allochromatium vinosum DSM 180]
Length = 423
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 166/424 (39%), Positives = 223/424 (52%), Gaps = 30/424 (7%)
Query: 30 SSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDG 89
+ PSK + L D R + +P CS CGLCD+ + AC F+ +
Sbjct: 11 TGPSKGLATISLLSSDERLKGRP----------KLCSDCGLCDSTLKGRMSSACIFVRNQ 60
Query: 90 MSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKT 149
+ IE +HGR RR D D+ G+H AR +P AQW+GIVT++ +L+
Sbjct: 61 TAEIE---QRLHGRARRPD--DERRFGIHRTQYAARMRRPNPQAQWSGIVTSLGARLLEQ 115
Query: 150 GMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLF 209
G VEAV+ + P R PVLARTP EVLA G KP LSPNL L V G+KRL F
Sbjct: 116 GRVEAVITTGAAPGTRFKSEPVLARTPAEVLATAGNKPCLSPNLRLLDQVREQGIKRLAF 175
Query: 210 CGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQD 269
G CQV LR+VE L LEKLYV+G C DN T L+ FL S P+T++HYEFMQD
Sbjct: 176 IGTSCQVHMLRAVEAELGLEKLYVIGIPCSDNVTYPDLEYFLTQVSRSPQTIVHYEFMQD 235
Query: 270 YKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGIS 329
+ + ++H DGH E V Y P + L + SC SCFDY N L DL VGYMG
Sbjct: 236 FSLWMRHEDGHKERVNYIDFPMDKLHGIFPSSCLSCFDYPNTLCDLTVGYMGA------- 288
Query: 330 MTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQP 389
Q++ R E G+E+ L++ LEI SSGDR + + A++ + P
Sbjct: 289 -ELGWQWVLARTEIGEELFELIRPDLEIGELTSSGDRTRGMPHYI-----ARLTQPPGAK 342
Query: 390 APKF-VGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKI 448
P F V L+A+ G KGLEFAR ++ +RN +V + + A + +P + +
Sbjct: 343 KPPFLVRKLVAYMQRKKGSKGLEFARAIIEMKLLRNLNYVRSKFPRFEA-RVVPEHVYQT 401
Query: 449 VEMY 452
+E Y
Sbjct: 402 LEPY 405
>gi|344342959|ref|ZP_08773829.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Marichromatium purpuratum 984]
gi|343805511|gb|EGV23407.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Marichromatium purpuratum 984]
Length = 420
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 161/436 (36%), Positives = 232/436 (53%), Gaps = 34/436 (7%)
Query: 23 SSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDA 82
S++ + PSK + L D R + +P CS CGLCD+ + A
Sbjct: 3 QSAAPVAEGPSKGMGQISLLSNDDRLKGRP----------RLCSDCGLCDSALKPQMTQA 52
Query: 83 CAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTI 142
C F+ + + + +E + GR R D+ G + AR P GAQW+G+VTT+
Sbjct: 53 CMFVNN---QTDAIEQRLFGRSRGDG--DELLFGCYRATYAARMRAPRPGAQWSGMVTTL 107
Query: 143 AIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAA 202
+L+ G VEAV+ + P R +P+LARTPEEVLA G KP+LSPNL L LV
Sbjct: 108 GARLLERGEVEAVITTAAAPGTRFKAQPILARTPEEVLATAGNKPSLSPNLGLLDLVREQ 167
Query: 203 GVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVL 262
G+KRL F G GCQV ALR++E L LE LYV+G C DN + L+ FL+ S P TV+
Sbjct: 168 GIKRLAFIGTGCQVHALRAIEAELGLEALYVIGIPCSDNVSYPDLEYFLEQISRSPATVV 227
Query: 263 HYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGV 322
H+EFMQD+ + L+H DG +E V Y P + L + +C SCFDY NAL+DL +GYMG
Sbjct: 228 HHEFMQDFSLWLRHEDGTVERVNYIDFPMDKLHGIFPSACLSCFDYPNALSDLTIGYMGA 287
Query: 323 PKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRR---PFVMETVKADDN 379
Q++ R ERG++M +++ LE GDR P ME + N
Sbjct: 288 --------ELGWQWVMARTERGEQMFEMLRPDLEFGTLTEGGDRTRGMPRFMERL----N 335
Query: 380 AKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADK 439
G G +P P + L+ + GP+GLEFAR ++ +RN HV R+ +++ +
Sbjct: 336 HPPGTG--RP-PLLIRKLVVWLQRNRGPRGLEFARAVIEMKLLRNLNHV-RSKFERQESR 391
Query: 440 HMPSYAKKIVEMYNQN 455
+P + + + Y ++
Sbjct: 392 VVPGFVYRALAPYAEH 407
>gi|309790871|ref|ZP_07685415.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Oscillochloris trichoides DG-6]
gi|308227158|gb|EFO80842.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Oscillochloris trichoides DG6]
Length = 408
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/391 (38%), Positives = 224/391 (57%), Gaps = 19/391 (4%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
CS CG+C + Y + C F+ + R E +E +HGR R + D+ G++
Sbjct: 20 CSDCGICSSSYRPMLPQVCMFVEN---RAEQIERKLHGRNR--NDGDELLFGIYRSRHVI 74
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG 184
R KP AQW+G+VT++ +L+ GMVEAV+ + P +P PVLARTPEEV A+
Sbjct: 75 RMAKPNLDAQWSGVVTSLGALLLERGMVEAVITTMAVPGTHHAPLPVLARTPEEVRASAR 134
Query: 185 VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTR 244
KP LSPNL+ L V +GVKRL F G CQV ALR++E HL LEKLYV+G C DN
Sbjct: 135 NKPCLSPNLDLLDQVRESGVKRLAFIGTSCQVHALRAIEDHLGLEKLYVIGIPCTDNVAY 194
Query: 245 EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL---VDVIAPS 301
L +FL+ AS P+T++H+EFMQD++V ++H DGHIE++ Y L + L + + +
Sbjct: 195 PDLLRFLQIASKSPDTIVHHEFMQDFRVWMRHEDGHIEKINYVDLDVSALGGELAIFPAA 254
Query: 302 CYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTI 361
C SCFDY N+LAD+ VGY+ P + + Q+ VR + G+E+ L++ LE+
Sbjct: 255 CLSCFDYQNSLADITVGYLSAP----LPPPERWQWTMVRTKAGEELFELIRPFLEVGTLS 310
Query: 362 SSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHT 421
G+R+ V E V +M + P + P + LIA+ GP+G+EFAR ++
Sbjct: 311 ERGNRQVGVSEYV------RMLKRPRKRPPFPIRKLIAWMQRNRGPRGMEFARSVIEMKL 364
Query: 422 IRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
+RN +V A G+ + +P Y + + Y
Sbjct: 365 LRNLQYVRDAHGRLE-RRIVPDYVYRALATY 394
>gi|390950184|ref|YP_006413943.1| coenzyme F420-reducing hydrogenase subunit beta [Thiocystis
violascens DSM 198]
gi|390426753|gb|AFL73818.1| coenzyme F420-reducing hydrogenase, beta subunit [Thiocystis
violascens DSM 198]
Length = 421
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 160/435 (36%), Positives = 226/435 (51%), Gaps = 34/435 (7%)
Query: 23 SSSSSSSSSPSKDGSKSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDA 82
++++ PSK + L D R + +P CS CGLCD+ + A
Sbjct: 4 AATAPLEEGPSKGFGQITLLSHDDRLKGRP----------RLCSDCGLCDSALKPSMPQA 53
Query: 83 CAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTI 142
C F+ + R + +E +HGR R+ D D+ G++ AR +P AQW+GIVT +
Sbjct: 54 CMFVDN---RTQAIEQRLHGRNRQPD--DELRFGIYRAQYAARMRRPNPQAQWSGIVTAL 108
Query: 143 AIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAA 202
+L+ G VEAV+ + P R +P+LART EVLA G KP LSPNL+ L V
Sbjct: 109 GARLLEQGKVEAVITTGAAPGTRFKAQPILARTAAEVLATAGNKPCLSPNLSLLDSVREQ 168
Query: 203 GVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVL 262
G+KRL G CQV ALR+VE L LE+LYV+G C DN E L FL S PETV+
Sbjct: 169 GIKRLALIGTSCQVHALRAVEAELGLEQLYVIGIPCSDNVAYEDLTYFLTQVSRSPETVV 228
Query: 263 HYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGV 322
H+EFMQD+ + ++H DGH+E + + P + L + +C SCFDY NAL+DL VGYMG
Sbjct: 229 HHEFMQDFSLWMRHEDGHVERLNFVDFPMDKLHGIFPSACLSCFDYPNALSDLTVGYMGA 288
Query: 323 PKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRR---PFVMETVKADDN 379
Q++ R ERG+E+ L++ LEI GDRR P ME +
Sbjct: 289 --------ELGWQWVLARTERGEELFELMRPDLEIGELTERGDRRRGMPRFMERLTHPPG 340
Query: 380 AKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADK 439
AK P + L+A GP GLEFAR ++ +RN +V + + +
Sbjct: 341 AKR-------PPFLIRKLVAMLQRRKGPGGLEFARAVIEMKLLRNLNYVRGKFARLEP-R 392
Query: 440 HMPSYAKKIVEMYNQ 454
+P + + +E Y +
Sbjct: 393 VVPYHVYQTLEPYAE 407
>gi|147799602|emb|CAN75142.1| hypothetical protein VITISV_038426 [Vitis vinifera]
Length = 366
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/250 (58%), Positives = 164/250 (65%), Gaps = 50/250 (20%)
Query: 200 EAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPE 259
+AAGVKRLLFCGVGCQVQALRSVE HLNL+KLYVLGTNCVDNGTREGLDKFL AASSEPE
Sbjct: 94 KAAGVKRLLFCGVGCQVQALRSVEQHLNLDKLYVLGTNCVDNGTREGLDKFLNAASSEPE 153
Query: 260 TVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGY 319
TVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAN+LVDVIAPSCYSCFDYTNALA+
Sbjct: 154 TVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANELVDVIAPSCYSCFDYTNALAE----- 208
Query: 320 MGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDN 379
KY + + + + IT + G + K D
Sbjct: 209 ----KYCNVLLLREVTWYAY-----------------ITSGLGGGIHGCAKIPWSKHDTT 247
Query: 380 AKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKK---- 435
+ + SQ +GPKGLEFARYSLDYHTIRNY++VNR WGK+
Sbjct: 248 STI--CDSQ----------------IGPKGLEFARYSLDYHTIRNYIYVNRMWGKQSGVC 289
Query: 436 --RADKHMPS 443
R H P+
Sbjct: 290 KTRVQGHSPT 299
>gi|219850322|ref|YP_002464755.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Chloroflexus aggregans DSM
9485]
gi|219544581|gb|ACL26319.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chloroflexus aggregans DSM 9485]
Length = 429
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/391 (39%), Positives = 220/391 (56%), Gaps = 19/391 (4%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
CS CG+C + +C F+ + R E +E +HGR R D+ G++ EL
Sbjct: 38 CSDCGICTGDLRPLMAQSCVFVNN---RAEEIERRLHGRNRHDG--DELLFGIYRELHVF 92
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG 184
R PV GAQW+G VT++ +L+ G+VE V+ + P R +P P+LARTP+EV A +G
Sbjct: 93 RMKPPVPGAQWSGAVTSLGALLLERGLVEGVITTGAVPGTRYAPLPILARTPDEVRATRG 152
Query: 185 VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTR 244
KP L+P L+ L V AG++R+ + G GCQV ALR++E L LE+LYV+G C DN T
Sbjct: 153 NKPCLAPTLDVLTQVRQAGLRRIAYIGTGCQVHALRAIEDQLGLERLYVIGIPCTDNTTY 212
Query: 245 EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL---VDVIAPS 301
L +FL+ S P+TV+H+EFMQD+++ LKH DG +E+V + L L + V P+
Sbjct: 213 PDLQRFLQVVSRSPDTVVHHEFMQDFRIWLKHEDGSVEKVNFVDLDVARLGGEIGVFPPA 272
Query: 302 CYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTI 361
C SCFDY N L+DL +GYMG P + + Q+ VR ERG E+ +L++ +E I
Sbjct: 273 CLSCFDYQNGLSDLTIGYMGAP----LPPDERWQWTLVRTERGVELFNLLRPYIEERAPI 328
Query: 362 SSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHT 421
S GDR T +M R P + P + L+AF GPKGLEFAR ++
Sbjct: 329 SGGDR------TRGMPAYIQMLRKPRRRPPWPIRQLVAFIQRRSGPKGLEFARSVIEMKL 382
Query: 422 IRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
+RN V G+ + +P Y + + Y
Sbjct: 383 LRNLQFVRERHGRL-ERRIVPGYVYRALARY 412
>gi|344337911|ref|ZP_08768844.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thiocapsa marina 5811]
gi|343801965|gb|EGV19906.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thiocapsa marina 5811]
Length = 428
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 214/394 (54%), Gaps = 26/394 (6%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
CS CG CD+ + C F+ + + G+E +HGR R+ ++ G++ + A
Sbjct: 36 CSDCGFCDSSLKLLMSQTCTFVRN---QTRGIEQRLHGRSRQGG--EEGRFGIYRAMYAA 90
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG 184
R +P AQW+G+VTT+ +L+ G V+AV+ + P R +P+LARTP+EVLA G
Sbjct: 91 RMARPNPHAQWSGMVTTLGARLLEQGKVDAVITTAAAPGTRFKAQPILARTPQEVLATAG 150
Query: 185 VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTR 244
KP LSP L+ + V G+KRL G GCQV LR+ E L LE+LYV+G C DN +
Sbjct: 151 NKPCLSPALSLIDAVREQGIKRLAVVGTGCQVHQLRAAEAELGLERLYVIGIPCSDNVSY 210
Query: 245 EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYS 304
L+ FL S PETV+H+EFMQD+ + ++H DGH+E + Y P + L + SC S
Sbjct: 211 PDLEYFLTQVSKSPETVVHHEFMQDFSLWMRHEDGHVERLNYIDFPMDKLHGIFPSSCLS 270
Query: 305 CFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSG 364
CFDY N L+D+ +GYMG P Q++ VR G+E+ +++ LEI SG
Sbjct: 271 CFDYANTLSDITIGYMGAPLGW--------QWVMVRTPTGEELFEMLRPELEIGALTESG 322
Query: 365 DRR---PFVMETVKADDNAKMGRGPSQPAPKF-VGNLIAFFINLVGPKGLEFARYSLDYH 420
DR P ME ++ P Q P + L+A GPKGLEFAR ++
Sbjct: 323 DRNRGMPRYME--------RLSHPPGQKRPPMPIRKLVAMLQRTRGPKGLEFARAVIEMK 374
Query: 421 TIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQ 454
+RN +V R+ K + +P + + +E Y +
Sbjct: 375 LLRNLNYV-RSKFPKFESRVVPYHVYETLEPYAE 407
>gi|189347280|ref|YP_001943809.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Chlorobium limicola DSM 245]
gi|189341427|gb|ACD90830.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chlorobium limicola DSM 245]
Length = 416
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 162/415 (39%), Positives = 221/415 (53%), Gaps = 30/415 (7%)
Query: 54 PPGGTYPAKDH--CSRCGLC--DTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDS 109
PP P D CSRCGLC + + A +C F + E + GR R
Sbjct: 4 PPKLENPRFDEPLCSRCGLCMGNAWATAESLKSCVF---NTGWLGAHEERLFGRTRNMHD 60
Query: 110 LDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPR 169
D+ G+ E A KP+EGAQW+GI+T I+ E L+TG+V+ VV +Q P+
Sbjct: 61 ADELRFGISRERFNAVMKKPLEGAQWSGIITAISTEALQTGLVDGVVTLQGT---TFQPK 117
Query: 170 PVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALR---SVEHHL 226
VLA T EE+ AA+G KP LSP L L VK+LL G C V LR + L
Sbjct: 118 AVLATTAEEIHAARGNKPVLSPVLQALHTAWKKKVKKLLVVGASCHVHVLRDFAATHPWL 177
Query: 227 NLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPY 286
+ +L V+G C DN L + S P+TVL++EFMQDYKVH+ H G +E++P+
Sbjct: 178 DGIELLVVGIPCTDNLEPAHLKWVFRHISRSPDTVLNFEFMQDYKVHIVHSTGKVEKIPF 237
Query: 287 FCLPANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGK 345
F LPA L V V + SC SCFDY N+LAD+ VGY G P YT Q+I +R ++GK
Sbjct: 238 FSLPAAVLKVGVFSNSCMSCFDYINSLADITVGYFGAP-YTA---DGKEQWILIRTDKGK 293
Query: 346 EMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMG-------RGPSQPAPKFVGNLI 398
++ LVKN + + P SGD VKA +G G + P F G L+
Sbjct: 294 KLFDLVKNDISVRPETGSGDS----FGAVKASIQPTIGPILQPHLLGDRRSMPLFFGKLL 349
Query: 399 AFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
+ GP+G+EFARYS+D H +RNY V R + +R D +P + + +V++YN
Sbjct: 350 SALKAKKGPRGIEFARYSIDIHALRNYFFV-RHYTPERLDVLVPEHIRHLVKLYN 403
>gi|86751131|ref|YP_487627.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Rhodopseudomonas palustris HaA2]
gi|86574159|gb|ABD08716.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Rhodopseudomonas palustris HaA2]
Length = 410
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/392 (35%), Positives = 213/392 (54%), Gaps = 15/392 (3%)
Query: 62 KDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEEL 121
++ C+ CG+ AC F+ +E VHGR R D+ + G H +
Sbjct: 22 RELCTDCGVSRMSDPKQCGQACQFIKPDYP---AMELQVHGRNRDPSKPDEAFFGPHRRM 78
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLA 181
L A +P EGAQWTGI T IA +L+TG V+AV+ + DP D+ P PVL +PE +
Sbjct: 79 LQAAMKQPREGAQWTGITTRIAERLLETGAVDAVLTMAPDPADKWKPMPVLVTSPEGMAQ 138
Query: 182 AKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDN 241
+G++ +P+L L AAG KR+ G+ CQV ALRS+E L E+LYV+GT C DN
Sbjct: 139 CRGMRMGYAPSLALLEPARAAGYKRIAVIGIPCQVYALRSLERKLGFERLYVIGTPCSDN 198
Query: 242 GTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVIAP 300
T E +FL S PET+ + EF DY V L+ DG ++ +P+ LP + L D
Sbjct: 199 TTTENFHEFLDLLSDRPETITYLEFRADYHVELRFTDGRVQAIPFLLLPISKLKPDFFPI 258
Query: 301 SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPT 360
+C +C DYTN LAD+ VGYM + Q++ VRN+RG+E+L L+ + + ++
Sbjct: 259 TCRTCVDYTNTLADITVGYMA---------GRGEQWLLVRNQRGEELLDLLGDEVRLSEP 309
Query: 361 ISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYH 420
S+G+R V +K + A G P + P ++ + + + VGP+GLEF R ++
Sbjct: 310 TSAGNRTAPVKGFLKNTELAAGGL-PVRGMPNWLRPFMGWLMPKVGPRGLEFGRARVEMK 368
Query: 421 TIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
+ LH+ R + K++ +P++ +V+ Y
Sbjct: 369 AVETVLHLRRNY-KQKIKNMVPAHVWALVKPY 399
>gi|374623268|ref|ZP_09695781.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Ectothiorhodospira sp. PHS-1]
gi|373942382|gb|EHQ52927.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Ectothiorhodospira sp. PHS-1]
Length = 398
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 216/396 (54%), Gaps = 17/396 (4%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
P +D C+ CGL T AC F+ R + LET VHGR R D D+ + G +
Sbjct: 8 PHRDLCTDCGLSRTADPRRCGRACQFI---HPRYDRLETQVHGRARNPDQEDELFFGPYR 64
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEV 179
+L A P +GAQWTGI T I +L+TG V+AV+ + +DP DR P+P+L E++
Sbjct: 65 RMLQAAMNTPRDGAQWTGITTRIGERLLETGQVDAVLTMTADPQDRWRPQPILVTRAEDM 124
Query: 180 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCV 239
+G++ +P L L A G +RL G+ CQ+ ALR++E L+L+ L+V+GT C
Sbjct: 125 ARCRGMRMGYAPLLAHLEPALAQGYRRLAVIGLPCQIYALRAIEPELDLDALHVIGTPCS 184
Query: 240 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVI 298
DN T E +FL + PETV + EF DY V L+ DG ++ +P+ LP + L D
Sbjct: 185 DNTTTEHFHEFLALLADRPETVTYLEFRADYHVELRFEDGRVQTIPFLKLPISKLPRDFF 244
Query: 299 APSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEIT 358
+C +C DYTN LAD+ VGYM + Q++ VRNE+G+ +L L+ + +
Sbjct: 245 PLTCQTCVDYTNVLADITVGYMA---------GRGEQWLVVRNEKGEALLDLLGDEVRTA 295
Query: 359 PTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLD 418
P S+G R+ V +K + A G P + P + L AF + +GP+GLEFAR ++
Sbjct: 296 PCTSAGKRQGPVKGFMKNTERAAGGL-PLRGMPDWARPLAAFLMPRIGPRGLEFARARVE 354
Query: 419 YHTIRNYLHVNRAWGKKRADKHM-PSYAKKIVEMYN 453
+ LH+ RA + KHM P + ++V+ Y
Sbjct: 355 MKAVETVLHLRRAQPGRM--KHMIPDHVWQLVKPYE 388
>gi|39934573|ref|NP_946849.1| coenzyme F420 hydrogenase subunit beta [Rhodopseudomonas palustris
CGA009]
gi|39648422|emb|CAE26943.1| possible coenzyme F420 hydrogenase beta subunit [Rhodopseudomonas
palustris CGA009]
Length = 409
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 219/405 (54%), Gaps = 15/405 (3%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP ++ C+ CG+ AC F+ +E VHGR R + D+
Sbjct: 13 PPLNAPAERELCTDCGVSRMSDPKQCGQACQFIKPDYP---AMERRVHGRNRDAATGDEA 69
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
+ G + ++ A +P EGAQWTGI TTIA +L+TG V+AV+ + DP D+ P PVL
Sbjct: 70 FFGPYRRMVQAAMKQPREGAQWTGITTTIAQRLLETGAVDAVIAMAPDPSDKWKPMPVLV 129
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYV 233
PE + +G++ +P+L + AAG KRL GV CQ+ ALR ++ L LEKLYV
Sbjct: 130 TKPEGMAQCRGMRMGYAPSLALIEPAIAAGYKRLAVIGVPCQIYALRRLQDQLGLEKLYV 189
Query: 234 LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 293
+GT C DN T E FL S +PET+ + EF DY V L+ DG+++ +P+ LP +
Sbjct: 190 IGTPCSDNTTTEAFHGFLDLLSDKPETITYLEFRADYHVELRFDDGNVKAIPFLLLPISK 249
Query: 294 L-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 352
L D +C +C DYTN LAD+ VGYMG + Q++ VRNERG+E+L L+
Sbjct: 250 LPPDFFPITCRTCVDYTNTLADITVGYMG---------GRGEQWLLVRNERGEELLKLLG 300
Query: 353 NLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEF 412
+ + ++ S+G+R V +K + A G P + P ++ + + + VGP+G+EF
Sbjct: 301 DDVRLSEPTSAGNRVAPVKGFLKNTELAAGGL-PVRGMPNWLRPFMGWLMPKVGPRGIEF 359
Query: 413 ARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 457
AR ++ + LH+ R + K + +P++ +V+ Y Q
Sbjct: 360 ARARVEMKAVETVLHLRRHY-KHKMKNMIPAHVWALVKPYGLEPQ 403
>gi|345873334|ref|ZP_08825247.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thiorhodococcus drewsii AZ1]
gi|343917293|gb|EGV28098.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thiorhodococcus drewsii AZ1]
Length = 424
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/392 (38%), Positives = 218/392 (55%), Gaps = 20/392 (5%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
CS CGLCD+ + AC F+ + + + +E +HGR R+ D+ G+H A
Sbjct: 36 CSDCGLCDSALSQMMPQACVFVRN---QTQSIEQRLHGRNRQPG--DELRFGIHRAQYAA 90
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG 184
R +P AQW+G++TT+ +L+ G VEAV+ + P R PVLARTPEEVLA G
Sbjct: 91 RMRRPNPKAQWSGMITTLGARLLEQGKVEAVITTGAAPGTRFKAEPVLARTPEEVLATAG 150
Query: 185 VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTR 244
KP LSPNLN + + G+KRL F G CQV +LR++E L LE+LYV+G C DN T
Sbjct: 151 NKPCLSPNLNLIDQIRDQGIKRLAFIGTSCQVHSLRAIEAELGLERLYVIGIPCSDNVTY 210
Query: 245 EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYS 304
L+ FL S P+TV+H+EFMQD+ + L+H +G +E V Y P + L + +C S
Sbjct: 211 PDLEYFLTQISRSPKTVVHHEFMQDFSLWLRHENGKVERVNYIDFPMDKLHGIFPSACLS 270
Query: 305 CFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSG 364
CFDY N+L DL VGYMG Q++ VR E G+E+L L+K LE + G
Sbjct: 271 CFDYPNSLCDLTVGYMGA--------ELGWQWVLVRTETGEELLELLKPDLEFSELTEGG 322
Query: 365 DRRPFVMETVKADDNAKMGRGPSQPAPKF-VGNLIAFFINLVGPKGLEFARYSLDYHTIR 423
DR + + + A++ P P F + L+A+ GPKGLEFAR ++ +R
Sbjct: 323 DRSRGMPKFI-----ARLTHPPGAKKPPFLIRRLVAYLQRKKGPKGLEFARAIIEMKLLR 377
Query: 424 NYLHVNRAWGKKRADKHMPSYAKKIVEMYNQN 455
N +V + + + + +P + + +E Y +
Sbjct: 378 NLNYVRSKFARVES-RVVPYHVYQALEPYAET 408
>gi|91978240|ref|YP_570899.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Rhodopseudomonas palustris BisB5]
gi|91684696|gb|ABE40998.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Rhodopseudomonas palustris BisB5]
Length = 410
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/400 (35%), Positives = 214/400 (53%), Gaps = 15/400 (3%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP ++ C+ CG+ AC F+ +E VHGR R D+
Sbjct: 14 PPLNDPAPRELCTDCGVSRMSDPKQCGQACQFIKPDYP---AMELQVHGRNRDPSRPDEF 70
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
+ G +L A +P +GAQWTGI T I +L+TG V+AV+ + DP D+ P PVL
Sbjct: 71 FFGPFRRMLQAAMKEPRDGAQWTGITTRIGERLLETGAVDAVLTMAQDPADKWKPMPVLV 130
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYV 233
PE + +G++ +P+L L AAG KR+ G+ CQV ALRS+E L E+LYV
Sbjct: 131 TKPEGMAQCRGMRMGYAPSLALLEPARAAGYKRIAVIGIPCQVYALRSLEQKLGFERLYV 190
Query: 234 LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 293
+GT C DN T E FL S +PET+ + EF DY V L+ DG ++E+P+ LP +
Sbjct: 191 IGTPCSDNTTTENFHGFLDLLSDKPETITYLEFRADYHVELRFTDGRVQEIPFLLLPISK 250
Query: 294 L-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 352
L D +C +C DYTN LAD+ VGYM + Q++ VRNERG+E+L+L+
Sbjct: 251 LKPDFFPITCRTCVDYTNTLADITVGYMA---------GRGEQWLLVRNERGEELLNLLG 301
Query: 353 NLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEF 412
+ + ++ S+G+R V +K + A G P + P ++ + + + VGP+GLEF
Sbjct: 302 DEVRLSEPTSAGNRTAPVKGFLKNTELAAGGL-PVRGMPNWLRPFMGWLMPKVGPRGLEF 360
Query: 413 ARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
R ++ + LH+ R + K++ +P++ +V+ Y
Sbjct: 361 GRARVEMKAVETVLHLRRNY-KQKIKNMVPAHVWALVKPY 399
>gi|316935327|ref|YP_004110309.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315603041|gb|ADU45576.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Rhodopseudomonas palustris DX-1]
Length = 407
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/405 (36%), Positives = 219/405 (54%), Gaps = 17/405 (4%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP ++ C+ CG+ AC F+ +E VHGR S D+
Sbjct: 13 PPLNQPAERELCTDCGVSRMSDPKQCGQACQFIKPDYPT---MERRVHGRD--SGSGDEA 67
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
+ G + +L A +P EGAQWTGI TTIA +L+TG V+AV+ + DP D+ P PVL
Sbjct: 68 FFGPYRRMLQAAMKQPREGAQWTGITTTIAQRLLETGAVDAVIAMAPDPSDKWKPMPVLV 127
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYV 233
PE + +G++ +P+L L AAG KRL GV CQ+ ALR ++ L LEKLYV
Sbjct: 128 TKPEGMAQCRGMRMGYAPSLALLEPAIAAGYKRLAVIGVPCQIYALRRLQDQLGLEKLYV 187
Query: 234 LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 293
+GT C DN T E FL S +PET+ + EF DY V ++ DG ++ VP+ LP +
Sbjct: 188 IGTPCSDNTTTEAFHGFLDLLSDKPETITYLEFCADYHVEMRFDDGKVKRVPFLLLPISK 247
Query: 294 L-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 352
L D +C +C DYTN LAD+ VGYMG + Q++ VRNERG+E+L L+
Sbjct: 248 LPPDFFPITCRTCVDYTNTLADITVGYMG---------GRGEQWLLVRNERGEELLRLLG 298
Query: 353 NLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEF 412
+ ++++ S+G+R V +K + A G P + P ++ L+ + + VGP+G+EF
Sbjct: 299 DEVKLSEPTSAGNRVAPVKGFLKNTELAAGGL-PVRGMPNWLRPLMGWLMPKVGPRGIEF 357
Query: 413 ARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 457
AR ++ + LH+ R + K + +P++ +V+ Y Q
Sbjct: 358 ARARVEMKAVETVLHLRRHY-KHKMKNMIPAHVWALVKPYGLEPQ 401
>gi|115523321|ref|YP_780232.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
[Rhodopseudomonas palustris BisA53]
gi|115517268|gb|ABJ05252.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Rhodopseudomonas palustris BisA53]
Length = 409
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 213/401 (53%), Gaps = 15/401 (3%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP +D C+ CG+ + AC F+ + +E VHGR R D+
Sbjct: 14 PPLAEAAPRDLCTDCGVSRSSDPKQCGQACQFIKPDYT---AMELQVHGRNRDSARPDEE 70
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
+ G +L A +P EGAQWTGI + + +L+TG VEAV+ + DP D+ P PV+
Sbjct: 71 FFGPFRRMLRAAMKQPREGAQWTGITSRLGERLLETGAVEAVLTMAQDPADKWKPMPVIV 130
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYV 233
P+ + +G++ +P L+ L A G KR+ G+ CQ+ ALR +E L EK+YV
Sbjct: 131 TDPKAMAQCRGMRMGYAPLLSLLEPARARGFKRIAVIGIPCQIYALRQLEKSLGFEKIYV 190
Query: 234 LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 293
+GT C DN T E FL S +P+T+ + EF DY V L+ DG ++E+P+ LP +
Sbjct: 191 VGTPCSDNTTTENFHGFLDLLSDQPDTITYLEFRADYHVELRFDDGRVKEIPFLLLPISK 250
Query: 294 LVDVIAP-SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 352
L P +C +C DYTN LAD+ VGYMG Q Q++ VRNERG+E+L L+
Sbjct: 251 LPSTFFPITCRTCVDYTNTLADITVGYMG---------GQGEQWLLVRNERGEEILKLLG 301
Query: 353 NLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEF 412
+ ++++ S+G R V +K + A G P + P ++ + + + VGP+GLEF
Sbjct: 302 DEVKLSEPGSAGKRAAPVKGFLKNTELAAGGL-PVRGMPNWLRPFMGWLMPKVGPRGLEF 360
Query: 413 ARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
AR L+ + LH+ R + +R +P + +V+ Y
Sbjct: 361 ARARLEMKAVETVLHLRRNY-PQRMKNMIPDHVWALVKPYG 400
>gi|192290086|ref|YP_001990691.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
domain-containing protein [Rhodopseudomonas palustris
TIE-1]
gi|192283835|gb|ACF00216.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Rhodopseudomonas palustris TIE-1]
Length = 409
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 142/405 (35%), Positives = 218/405 (53%), Gaps = 15/405 (3%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP ++ C+ CG+ AC F+ +E VHGR R + D+
Sbjct: 13 PPLNAPAERELCTDCGVSRMSDPKQCGQACQFIKPDYP---AMERRVHGRNRDAATGDEA 69
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
+ G + ++ A +P E AQWTGI TTIA +L+TG V+AV+ + DP D+ P PVL
Sbjct: 70 FFGPYRRMVQAAMKQPREEAQWTGITTTIAQRLLETGAVDAVIAMAPDPSDKWKPMPVLV 129
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYV 233
PE + +G++ +P+L + AAG KRL GV CQ+ ALR ++ L LEKLYV
Sbjct: 130 TKPEGMAQCRGMRMGYAPSLALIEPAIAAGYKRLAVIGVPCQIYALRRLQDQLGLEKLYV 189
Query: 234 LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 293
+GT C DN T E FL S +PET+ + EF DY V L+ DG+++ +P+ LP +
Sbjct: 190 IGTPCSDNTTTEAFHGFLDLLSDKPETITYLEFRADYHVELRFDDGNVKAIPFLLLPISK 249
Query: 294 L-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 352
L D +C +C DYTN LAD+ VGYMG + Q++ VRNERG+E+L L+
Sbjct: 250 LPPDFFPITCRTCVDYTNTLADITVGYMG---------GRGEQWLLVRNERGEELLKLLG 300
Query: 353 NLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEF 412
+ + ++ S+G+R V +K + A G P + P ++ + + + VGP+G+EF
Sbjct: 301 DDVRLSEPTSAGNRVAPVKGFLKNTELAAGGL-PVRGMPNWLRPFMGWLMPKVGPRGIEF 359
Query: 413 ARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 457
AR ++ + LH+ R + K + +P++ +V+ Y Q
Sbjct: 360 ARARVEMKAVETVLHLRRHY-KHKMKNMIPAHVWALVKPYGLEPQ 403
>gi|209963491|ref|YP_002296406.1| coenzyme F420 hydrogenase [Rhodospirillum centenum SW]
gi|209956957|gb|ACI97593.1| coenzyme F420 hydrogenase [Rhodospirillum centenum SW]
Length = 423
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 144/395 (36%), Positives = 209/395 (52%), Gaps = 17/395 (4%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
C+ CG+ T AC F+ + G+ET VHGR R + + G ++ A
Sbjct: 25 CTDCGISRTTTPGRCGHACQFIRPDYA---GMETQVHGRSRDPSRPGELHFGPFRRMVRA 81
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG 184
P GAQWTGI T IA +L+TG V+AV+ + DPDD+ P PVL PE + +G
Sbjct: 82 AMATPRPGAQWTGITTRIAERLLETGAVDAVLTMAPDPDDKWRPVPVLVTKPEGMARCRG 141
Query: 185 VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTR 244
++ +P L L G +RL G+ CQV ALR +E L E+LYV+G C DN T
Sbjct: 142 MRMGYAPLLALLEPARERGYRRLAVVGIPCQVHALRRLEAELGFERLYVIGIPCSDNTTT 201
Query: 245 EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVIAPSCY 303
E +FL S PET+ + EF D+ V L+ DG ++E+P+ LP + L D +C
Sbjct: 202 ERFHQFLNLLSDRPETITYLEFRADFYVELRFDDGRVKEIPFLLLPISKLPTDFFPLTCR 261
Query: 304 SCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISS 363
+C DYTN LAD+ VGYMG Q Q++ VRNERG+E+LSL+ + + ++ S+
Sbjct: 262 TCVDYTNVLADITVGYMG---------GQGEQWLLVRNERGEELLSLLGDEVRLSEPGSA 312
Query: 364 GDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIR 423
G R+ V ++ A G P + P ++ L+ + + VGPKGLEFAR ++
Sbjct: 313 GKRQGPVKGFIENTKRAAGGL-PLRQMPDWLRPLVGWLMPKVGPKGLEFARARVEMKASE 371
Query: 424 NYLHVNRAWGKKRADKHM-PSYAKKIVEMYNQNGQ 457
LH+ R + R KHM P + ++V Y +
Sbjct: 372 TVLHLRRE--QPRRMKHMVPPHVWELVRPYGLEAE 404
>gi|90422756|ref|YP_531126.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Rhodopseudomonas palustris BisB18]
gi|90104770|gb|ABD86807.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Rhodopseudomonas palustris BisB18]
Length = 409
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/410 (34%), Positives = 221/410 (53%), Gaps = 22/410 (5%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP A++ C+ CG+ T AC F+ +E VHGR R D+
Sbjct: 14 PPLAEPVARELCTDCGVSRTSDPKQCGQACQFIKPDYP---AMELRVHGRVRDPAKPDEA 70
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
+ G ++ A +P +GAQWTGI T I +L+TG V+AV+ + DPDD+ P PV+
Sbjct: 71 FFGPFRRMVRAAMKQPRQGAQWTGITTMIGERLLQTGAVDAVLTMAQDPDDKWKPMPVIV 130
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYV 233
E + A +G++ +P L+ L AG KR+ G+ CQ+ ALR +E L EKLY
Sbjct: 131 TKAEGMKACRGMRMGYAPLLSLLEPARDAGHKRIAVIGIPCQIYALRQLEQKLGFEKLYA 190
Query: 234 LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 293
+GT C DN T E +FL S +P+++ + EF DY V L+ DG ++E+P+ LP +
Sbjct: 191 IGTPCSDNTTTESFHQFLDLLSDKPDSITYLEFRADYHVELRFDDGRVKEIPFLLLPISK 250
Query: 294 L-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 352
L D +C +C DYTN LAD+ VGYMG Q Q++ +RNERG+E+L ++
Sbjct: 251 LPPDFFPMTCRTCVDYTNTLADITVGYMG---------GQGEQWLLIRNERGEELLRVLG 301
Query: 353 NLLEITPTISSGDRRPFVMETVKADDNAKMGRG--PSQPAPKFVGNLIAFFINLVGPKGL 410
+ + ++ S+G R V +K N ++ G P + P ++ L+ + + VGP+GL
Sbjct: 302 DEVRLSEPGSAGKRTAPVKGFMK---NVELAAGGLPVRGMPNWLRPLMGWLMPKVGPRGL 358
Query: 411 EFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN---QNGQ 457
EFAR ++ I + LH+ R + +R +P++ +V+ Y Q+G+
Sbjct: 359 EFARTRVEMKAIESVLHLRRQY-PQRIKNMVPAHVWALVKPYGIEPQDGE 407
>gi|383757271|ref|YP_005436256.1| hypothetical protein RGE_14160 [Rubrivivax gelatinosus IL144]
gi|381377940|dbj|BAL94757.1| hypothetical protein RGE_14160 [Rubrivivax gelatinosus IL144]
Length = 413
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 213/399 (53%), Gaps = 23/399 (5%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
PA+ C+ CG+ + AC F+ + +ET V GR R D+ + G
Sbjct: 20 PARTLCTDCGVSRSSDPRRCGRACQFIQPDYA---AMETRVQGRPRDPGRADELHFGPFR 76
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEV 179
+ A +P +GAQWTGI T +A +L+TG V+AV+ + DP+DR P P L P E+
Sbjct: 77 RMWRAALKRPSDGAQWTGITTRLAERLLETGAVDAVLTMAPDPEDRWRPVPTLVTKPGEL 136
Query: 180 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCV 239
+G++ +P L+ L AAG KRL G+ CQV ALR++E L LE+LYV+GT C
Sbjct: 137 ARCRGMRMGYAPLLSLLEPAVAAGHKRLAVIGIPCQVYALRALEQELGLEQLYVIGTPCS 196
Query: 240 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVI 298
DN T E +FL + +PE++ + EF DY V ++ DG VP+ LP + L D
Sbjct: 197 DNTTTENFHRFLGLLTPKPESITYLEFRADYHVEIRFDDGRQRRVPFLQLPLSQLPTDFF 256
Query: 299 APSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEIT 358
+C +C DY+N LAD+ VGYMG + Q++ VRNERG+++L L+ + + +
Sbjct: 257 PLTCRTCVDYSNVLADITVGYMG---------GEGEQWLLVRNERGEKILGLLGDEVTLA 307
Query: 359 PTISSGDR----RPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFAR 414
S+G R + F+ T +A + R PS ++ ++ + + VGP+GLEFAR
Sbjct: 308 EPGSAGKREGPVKGFLANTERAAGGLPLRRMPS-----WLRPIVGWLMPKVGPRGLEFAR 362
Query: 415 YSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
L+ + LH+ R K + +P + K+VE Y
Sbjct: 363 ARLEMKAVETVLHLRREQPAKMKN-MVPPHVWKLVEPYG 400
>gi|332527610|ref|ZP_08403657.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Rubrivivax benzoatilyticus JA2]
gi|332112013|gb|EGJ11990.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Rubrivivax benzoatilyticus JA2]
Length = 404
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 212/400 (53%), Gaps = 15/400 (3%)
Query: 55 PGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTY 114
P P + C+ CG+ + AC F+ + +ET VHGR R D+ Y
Sbjct: 6 PHDAAPTRTLCTDCGVSRSADPRRCGRACQFIQPDYA---AMETRVHGRPRDPARADERY 62
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
G + A +P EGAQWTGI T +A +L+TG V+AV+ + DP+DR P P L
Sbjct: 63 FGPFRRMWRAALKRPSEGAQWTGITTRLAERLLETGAVDAVLTMAPDPEDRWRPVPTLVT 122
Query: 175 TPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVL 234
P ++ +G++ +P L+ L AAG KRL G+ CQV ALR++E L LE+LYV+
Sbjct: 123 KPGDLARCRGMRMGYAPLLSLLEPAVAAGHKRLAVIGIPCQVYALRALEQELGLEQLYVI 182
Query: 235 GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL 294
GT C DN T E +FL + +PE++ + EF DY V ++ DG VP+ LP + L
Sbjct: 183 GTPCSDNTTTENFHRFLGLLTPKPESITYLEFRADYHVEIRFDDGRQRRVPFLQLPLSQL 242
Query: 295 -VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKN 353
D +C +C DY+N LAD+ VGYMG + Q++ VRNERG+++L L+ +
Sbjct: 243 PTDFFPLTCRTCVDYSNVLADITVGYMG---------GEGEQWLLVRNERGEKILGLLGD 293
Query: 354 LLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFA 413
+ + S+G R V + + A G P + P ++ ++ + + VGP+GLEFA
Sbjct: 294 EVTLAEPGSAGKREGPVKGFLANTERAAGGL-PLRRMPAWLRPIVGWLMPKVGPRGLEFA 352
Query: 414 RYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
R L+ + LH+ R K + +P + ++V+ Y
Sbjct: 353 RARLEMKAVETVLHLRREQPAKMKN-MVPPHVWELVQPYG 391
>gi|402851269|ref|ZP_10899434.1| hydrogenase [Rhodovulum sp. PH10]
gi|402498471|gb|EJW10218.1| hydrogenase [Rhodovulum sp. PH10]
Length = 413
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 134/368 (36%), Positives = 198/368 (53%), Gaps = 14/368 (3%)
Query: 62 KDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEEL 121
+D C+ CG+ T AC FL +E VHGR R D+ + G +++
Sbjct: 27 RDLCTDCGVSRTARPGDCGHACQFLKPDYP---AMERRVHGRARDPARPDERFFGPFQQM 83
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLA 181
+ A P GAQWTGI T + +L+TGMV+AV+ + DP D P+PVL PE +
Sbjct: 84 VRAALKAPRPGAQWTGITTRLGERLLETGMVDAVLTMAPDPSDVWRPKPVLVTKPEAMAQ 143
Query: 182 AKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDN 241
+G++ +P L L A G +++ G+ CQ+ ALR++E L EK+YV+GT C DN
Sbjct: 144 CRGMRMGWAPLLALLEPARAQGFEKIAVIGIPCQIHALRALEDDLGFEKIYVVGTPCSDN 203
Query: 242 GTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLV-DVIAP 300
T E +FL + +P T+ + EF DY V L+ DG + VP+ LP + L D
Sbjct: 204 TTTERFHEFLALLADDPSTITYLEFRADYCVELRFSDGSEKRVPFLMLPLSKLPRDFFPL 263
Query: 301 SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPT 360
+C +C DYTN LAD+ VGYMG + Q++ VRN+RG E+LSL+ + + P
Sbjct: 264 TCRTCVDYTNTLADITVGYMG---------GEGEQWLLVRNDRGAEILSLLGDEVRTAPP 314
Query: 361 ISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYH 420
S+G R V +K + A G P + P F+ L+A+ + +GP+GLEFAR ++
Sbjct: 315 GSAGKRAAPVKGFLKNTERAAGGL-PVRGTPNFLRPLVAWLMPKIGPRGLEFARARVEMK 373
Query: 421 TIRNYLHV 428
I LH+
Sbjct: 374 AIETILHL 381
>gi|312114853|ref|YP_004012449.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Rhodomicrobium vannielii ATCC
17100]
gi|311219982|gb|ADP71350.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Rhodomicrobium vannielii ATCC 17100]
Length = 417
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 214/405 (52%), Gaps = 15/405 (3%)
Query: 62 KDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEEL 121
+D C+ CG+ + AC F+ + +E VHGR R D+ + G ++ +
Sbjct: 20 RDLCTDCGVSRSSDPRRCGRACQFIKPDYPK---MEARVHGRTRNPQREDERFFGPYKRM 76
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLA 181
A +P EGAQWTGI T I +L+TG V+AV+ + +D DR P+P L ++
Sbjct: 77 ARAAMKRPREGAQWTGITTRIGERLLETGAVDAVLTMVADDADRWRPKPALITRAADMAK 136
Query: 182 AKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDN 241
A+G++ +P L L AG KR+ GV CQ+ ALR +E L E++Y +GT C DN
Sbjct: 137 ARGMRMGYAPLLALLEPAREAGHKRIAVIGVPCQIFALRGIEQELGFERVYAIGTPCSDN 196
Query: 242 GTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVIAP 300
T E KFL S +PET+ + EF DY V L+ +G ++E+P+ LP + L D
Sbjct: 197 TTTENFHKFLNLLSDKPETITYLEFRADYHVELRFENGKVKEIPFLLLPISKLPADFFPL 256
Query: 301 SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPT 360
+C +C DYTN+L+D+ VGYM Q Q++ VRNE G+E+L L+ + + ++
Sbjct: 257 TCRTCVDYTNSLSDITVGYMA---------GQGQQWLIVRNETGEELLRLLGDEVSLSEP 307
Query: 361 ISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYH 420
++G R V +K + A G P + P + + + + VGP+GLEFAR ++
Sbjct: 308 GTAGKRDGPVKGFLKNTELAAGGL-PMRSMPNWARPIAGWLMPKVGPRGLEFARARVEMK 366
Query: 421 TIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQMLSSK 465
+ LH+ RA KR +P + +VE Y + + +SSK
Sbjct: 367 AVETVLHL-RAKLPKRIHNMVPEHVWALVERYGLVPSLSERVSSK 410
>gi|159045808|ref|YP_001534602.1| putative coenzyme F420 hydrogenase [Dinoroseobacter shibae DFL 12]
gi|157913568|gb|ABV95001.1| putative coenzyme F420 hydrogenase [Dinoroseobacter shibae DFL 12]
Length = 409
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 212/404 (52%), Gaps = 21/404 (5%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
P G + C+ CGL T A AC F+ + +E VHGR R D+
Sbjct: 12 PTPGPAAQRKLCTDCGLSRTKDAAKCGQACQFIQPDYPK---MEAQVHGRARDPGRGDEQ 68
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
+ G + + A P GAQWTG+ T +A ++L+ G V+AV+ + DP+D PRPV+
Sbjct: 69 FFGPYRRMYRAALHAPKPGAQWTGLTTRLAQKLLEDGAVDAVLGMGPDPEDSWRPRPVII 128
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYV 233
P E+ +G++ +P L+ L G++RL G+ CQV ALR++E L E+LYV
Sbjct: 129 TDPAEMAHLRGMRMGYAPLLSLLEPAAKTGLRRLAIIGIPCQVYALRAMEAELGFERLYV 188
Query: 234 LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 293
+GT C DN T E +FL S PE + + EF DY V L+ +DG ++P+ LP +D
Sbjct: 189 IGTPCSDNTTTENFHQFLARLSPRPEDITYLEFRADYHVELRFIDGSRRDIPFLKLPLSD 248
Query: 294 LVDVIAP-SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 352
L + P +C +C DYTN LAD+ VGYM + Q++ VRN RG+E+L +
Sbjct: 249 LPNDFFPMTCRTCVDYTNTLADITVGYMA---------GEGDQWLIVRNARGQEILDRLG 299
Query: 353 NLLEITPTISSGDRRPFVMETVK--ADDNAKMGRG-PSQPAPKFVGNLIAFFINLVGPKG 409
+ + + S+G R +VK A++ A+ G P + P + ++ + + +GPKG
Sbjct: 300 DEVRLETPGSAGKR----AGSVKGFAENTARAAGGLPLRKMPDWARGIVGWLMPRIGPKG 355
Query: 410 LEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
LEFAR ++ + LH+ RA KR +P + ++ E Y
Sbjct: 356 LEFARARVEMKAVETVLHLRRA-HPKRMRAMIPDHVWRLAEPYG 398
>gi|119356035|ref|YP_910679.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Chlorobium
phaeobacteroides DSM 266]
gi|119353384|gb|ABL64255.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chlorobium phaeobacteroides DSM 266]
Length = 428
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 138/379 (36%), Positives = 207/379 (54%), Gaps = 37/379 (9%)
Query: 65 CSRCGLC--DTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
CS+CGLC + + + ++C F +E E + GR R D D+ G+ +
Sbjct: 31 CSKCGLCMGNAWPVKESLESCVF---RCGWVENHEKRIFGRVRNPDDSDELRFGISLKRF 87
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
A KPV GAQW+GI+T I+ L+T +V+AV+ + +P L P+ VLA+T +++ A
Sbjct: 88 NATLKKPVNGAQWSGIITRISTMALQTNLVDAVLTLHGEP---LQPKAVLAKTAQDIHEA 144
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE----HHLNLEKLYVLGTNC 238
+G KP LSP L L +RLL G C V +R + +L+ LY++G C
Sbjct: 145 RGNKPVLSPVLQALHTAYREKTRRLLVVGAACHVHMVRDFTRKSPYFADLD-LYIVGIPC 203
Query: 239 VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDV 297
DN L + S PETV+++EFMQDY+VH+ H G +E++P+FCLP+ + V V
Sbjct: 204 TDNLEPSHLQWVFRNISKNPETVINFEFMQDYRVHILHKAGKVEKIPFFCLPSAVMKVGV 263
Query: 298 IAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEI 357
SC SCFDY N+L+D+ VGY+G P S + Q+I VR ERG+++L L+ + +E
Sbjct: 264 FPNSCLSCFDYINSLSDITVGYLGAP----YSKNRKTQWIIVRTERGEKLLDLINDEIET 319
Query: 358 TPTISSGDR--------RPFVMETV---KADDNAKMGRGPSQPAPKFVGNLIAFFINLVG 406
+P + GD +P +M + K DD M PK++G ++ G
Sbjct: 320 SPEVFFGDSHSAVQAALQPTLMPILQPEKLDDRKAM--------PKWLGIYLSRKKAKSG 371
Query: 407 PKGLEFARYSLDYHTIRNY 425
P G EFA+YS+D H IRN+
Sbjct: 372 PGGTEFAKYSIDIHAIRNF 390
>gi|254282622|ref|ZP_04957590.1| putative coenzyme F420 hydrogenase beta subunit [gamma
proteobacterium NOR51-B]
gi|219678825|gb|EED35174.1| putative coenzyme F420 hydrogenase beta subunit [gamma
proteobacterium NOR51-B]
Length = 412
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 144/395 (36%), Positives = 210/395 (53%), Gaps = 15/395 (3%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
P ++ C+ CG+ T AC F+ + LE VHGR R + D+ + GV
Sbjct: 6 PHRNLCTDCGISRTEDPDRCGRACQFIRPDYA---ALEQRVHGRTRDLERGDERFFGVTR 62
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEV 179
+L AR+ P E AQWTGI T I ++L+T V V+C+ DP+D P+P L P+ +
Sbjct: 63 AMLRARRNPPAENAQWTGITTLIGQKLLETEAVSGVLCIGPDPEDSWKPQPRLITEPDAM 122
Query: 180 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCV 239
+G++ +P L L AAG +RL G+ CQ+ ALR++E L LE+LYV+GT C
Sbjct: 123 AGCRGMRMGYAPLLALLEPAIAAGHRRLAVIGIPCQIYALRALEEELGLERLYVIGTPCS 182
Query: 240 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLV-DVI 298
DN T E FL+ +PE + + EF+ D+ V L+ DG +P+ LP DL D
Sbjct: 183 DNTTTENFHHFLEKLDDKPEDITYLEFLPDFHVELRFTDGRKRRIPFLMLPIADLPKDFF 242
Query: 299 APSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEIT 358
+C +C DYTNALAD+ VGYMG Q++ RN RG E+LSL+++ L +
Sbjct: 243 PLTCRTCVDYTNALADITVGYMG---------GSGEQWLITRNPRGVELLSLIEDELVLA 293
Query: 359 PTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLD 418
P SSG+RR V ++ A G P + P ++ ++A + + GPKGLEFAR L+
Sbjct: 294 PPTSSGNRRSAVAGFIENTRRA-CGGLPLRRMPGWLRPIVARLMPITGPKGLEFARTRLE 352
Query: 419 YHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
+ LH+ R KR +P Y + Y+
Sbjct: 353 MKAAESVLHLRRE-APKRMRHMLPDYIWTLTAPYD 386
>gi|384262343|ref|YP_005417530.1| coenzyme F420 hydrogenase [Rhodospirillum photometricum DSM 122]
gi|378403444|emb|CCG08560.1| Coenzyme F420 hydrogenase [Rhodospirillum photometricum DSM 122]
Length = 397
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 211/404 (52%), Gaps = 15/404 (3%)
Query: 58 TYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGV 117
T PA+ C+ CG+ + AC F+ +R LE +HGR R + D+ + G
Sbjct: 6 TAPARALCTDCGVSRSSDPRRCGRACQFIHPDYAR---LEARIHGRARDPERADELFFGP 62
Query: 118 HEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPE 177
+ ++ A +P EGAQWTGI T +A +L++G VEAV+ + +DP DR P P L P
Sbjct: 63 YTAMVQAALKEPREGAQWTGITTRLAERLLESGQVEAVLAMAADPADRWRPVPTLVTDPA 122
Query: 178 EVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTN 237
++ +G++ +P L L A G++RL GV CQ+ LR +E L +++ V+G
Sbjct: 123 DMKRCRGMRMGYAPLLAELEPARARGIRRLAVIGVPCQIYPLRELEESLGFDEITVIGIP 182
Query: 238 CVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VD 296
C DN T E +FL + PETV + EF+ +Y V ++ DG + +P+ LP + L D
Sbjct: 183 CSDNTTTENFHRFLGVLTPAPETVTYLEFLANYHVEMRFTDGRVRHIPFLKLPLSTLPAD 242
Query: 297 VIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLE 356
+C +C DYTNALADL VGYMG + Q++ VRN RG+ +L L+ + +
Sbjct: 243 FFPLTCRACVDYTNALADLTVGYMG---------GRGEQWVLVRNARGQAVLDLLGDEVR 293
Query: 357 ITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYS 416
++ S+G R V + + A G P + P + ++A+ + GP+GLEFAR
Sbjct: 294 LSAPTSAGKRFSAVKGFLANVERAAGGL-PLRSMPDWARPIVAWLMPRTGPRGLEFARTR 352
Query: 417 LDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQ 460
++ + +H+ + + KR +P + +V Y D+
Sbjct: 353 VEMKALEAIVHLRQHY-PKRLKAMIPPHLWTLVAPYGLTPGPDE 395
>gi|110681118|ref|YP_684125.1| coenzyme F420 hydrogenase, beta subunit [Roseobacter denitrificans
OCh 114]
gi|109457234|gb|ABG33439.1| coenzyme F420 hydrogenase, beta subunit, putative [Roseobacter
denitrificans OCh 114]
Length = 402
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 209/400 (52%), Gaps = 31/400 (7%)
Query: 69 GLCDTYYIAHVKD------ACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
GLC ++ +KD AC F+ LE VHGR R + D+T+ G + +
Sbjct: 13 GLCTDCGVSRLKDPRACGKACQFIAPDYP---ALEKAVHGRAR--GTGDETFFGPFKAMH 67
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
AR P EGAQWTGI T +A ++L G V+AV+ + D DR P+P L ++ A
Sbjct: 68 RARMVAPAEGAQWTGITTALAADLLTRGRVDAVLTMVPDDADRWRPKPALITEASDMARA 127
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNG 242
+G++ +P L L +A G RL G+ CQ+ ALR++E L LE+LYV+GT C DN
Sbjct: 128 RGMRMGYAPLLALLEEAQAQGFNRLAVIGIPCQIYALRALEADLGLERLYVIGTPCSDNT 187
Query: 243 TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVIAPS 301
T E +FL PET+ + EF DY+V L+ DG +P+ LP +DL D +
Sbjct: 188 TTENFHRFLALLDEAPETITYLEFRADYQVELRFTDGRQRLIPFLSLPISDLPRDFFPLT 247
Query: 302 CYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTI 361
C +C DYTN+LAD+ VGYMG + Q++ VRN RG EML+ + + +++
Sbjct: 248 CRTCVDYTNSLADITVGYMG---------GEGGQWLLVRNARGAEMLAGLGDRIQLQTPG 298
Query: 362 SSGDR----RPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSL 417
S+G R + F+ T +A G P + P ++ ++++ +GP+GLEFAR +
Sbjct: 299 SAGKRANAVKGFIANTARA-----AGGLPLRRMPDWLRPIVSWLQPRIGPRGLEFARTRI 353
Query: 418 DYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQ 457
+ LH+ R K + +P + K+ Y+ Q
Sbjct: 354 EMKAAETILHLRREEPAKMKN-MIPDHVWKVAAPYDLTPQ 392
>gi|37522112|ref|NP_925489.1| hypothetical protein glr2543 [Gloeobacter violaceus PCC 7421]
gi|35213111|dbj|BAC90484.1| glr2543 [Gloeobacter violaceus PCC 7421]
Length = 388
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/404 (35%), Positives = 215/404 (53%), Gaps = 28/404 (6%)
Query: 54 PPGGTYPAKDH--CSRCGLC-DTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSL 110
P G YP + CS CGLC + AHV++ C F D R+ E +HGR RR S
Sbjct: 5 PIGPAYPLLQNRTCSNCGLCFHAQFEAHVEEICPFEDD---RVSEREVQLHGRSRRL-SG 60
Query: 111 DDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRP 170
D+ Y GV + AR + P +Q G V+T+ +L +G VEAV+ + +PD+ + P
Sbjct: 61 DELYFGVFRSMHAARLSTPRPDSQTGGAVSTLLERLLDSGKVEAVLTTRRNPDN--TGTP 118
Query: 171 VLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK 230
VL R E+ G + L+P L+ + V+ G++RL GVGCQV ALR++E L LEK
Sbjct: 119 VLVRHAAELAHTGGSRWDLAPILDLVPEVKRQGIRRLAVVGVGCQVSALRAIEAQLGLEK 178
Query: 231 LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLP 290
LYV+G C DN T + +K S P TV EFM D+++ H +G IE+V YF +P
Sbjct: 179 LYVVGLVCTDNMTFANWQRLIKTTSRSPRTVKKLEFMADFRIWFWHENGAIEKVSYFEMP 238
Query: 291 ANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSL 350
+ L +C SCFD TN LADL VGYM I Q+ VRNE+G+ + +L
Sbjct: 239 MDKLRGCFPQACLSCFDQTNGLADLSVGYMA----ADIGW----QWFLVRNEQGEALFNL 290
Query: 351 VKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGL 410
+++ LE+ G+R + + ++ +G+ P+ P + L + + GP+GL
Sbjct: 291 LRDDLEMGRFTDRGNRSEAMKQILRY-----LGK-PAITLPSLLAQLFTWQVEHFGPRGL 344
Query: 411 EFARYSLDYHTIRN--YLHVNRAWGKKRADKHMPSYAKKIVEMY 452
EFAR +++ RN YL +R + K +P + + I++ Y
Sbjct: 345 EFARLAVENKQTRNWYYLKTHRP---DKLKKLIPRHVQAILDQY 385
>gi|339502020|ref|YP_004689440.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Roseobacter
litoralis Och 149]
gi|338756013|gb|AEI92477.1| putative coenzyme F420 hydrogenase/dehydrogenase, subunit beta
[Roseobacter litoralis Och 149]
Length = 405
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 209/403 (51%), Gaps = 34/403 (8%)
Query: 69 GLCDTYYIAHVKD------ACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
GLC ++ KD AC F+ LE VHGR R + D+T+ G + +
Sbjct: 13 GLCTDCGVSRFKDPRACGKACQFIAPDYP---ALEKAVHGRTR--GAGDETFFGPFKAMH 67
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
AR P EGAQWTGI T +A ++L G V+AV+ + D D P+P L ++ A
Sbjct: 68 RARMVAPAEGAQWTGITTALAADLLTRGRVDAVLTMVPDDADSWRPKPALITEASDMARA 127
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNG 242
+G++ +P L L +A G KRL G+ CQ+ ALR++E L LE+LYV+GT C DN
Sbjct: 128 RGMRMGYAPLLALLEEAQAQGFKRLAVIGIPCQIYALRALEADLGLERLYVIGTPCSDNT 187
Query: 243 TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLV-DVIAPS 301
T E FLK PET+ + EF D+KV L+ DG +P+ LP +DL D +
Sbjct: 188 TTENFHTFLKLLDEAPETITYLEFRADFKVELRFTDGRQRLIPFLSLPISDLPRDFFPLT 247
Query: 302 CYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTI 361
C +C DYTN+LAD+ VGYMG + Q++ VRN RG EML + + +
Sbjct: 248 CRTCVDYTNSLADITVGYMG---------GEGDQWLLVRNARGAEMLEGLGARIHLQAPG 298
Query: 362 SSGDR----RPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSL 417
S+G R + F+ T +A G P + P ++ ++++ +GP+GLEFAR +
Sbjct: 299 SAGKRANAVKGFIANTARA-----AGGLPLRRMPDWLRPIVSWLQPRIGPRGLEFARTRV 353
Query: 418 DYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN---QNGQ 457
+ LH+ R K + +P + K+ E Y+ Q+G+
Sbjct: 354 EMKAAETILHLRREEPAKMKN-MVPDHVWKVAEPYDLKPQDGE 395
>gi|89052791|ref|YP_508242.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta-like protein
[Jannaschia sp. CCS1]
gi|88862340|gb|ABD53217.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Jannaschia sp. CCS1]
Length = 412
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 199/402 (49%), Gaps = 22/402 (5%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKD------ACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
P +R GLC I+ + D AC F+ E +HGR ++
Sbjct: 13 PKLTGAARPGLCTDCGISRMGDGKACGKACQFIAPDYPTAE---NRIHGRSAEPALAEEA 69
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
+ GV + A T P +GAQWTGI T +A E+L++ V AV+ V PDDR P PV+
Sbjct: 70 FFGVTHSMQRAALTVPADGAQWTGITTELAAELLRSEAVTAVLAVAPHPDDRWKPLPVIV 129
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYV 233
P+E+ +G++ +P L L AAG R+ G+ CQV ALR +E L L++LYV
Sbjct: 130 TDPDEMAKCRGMRMGYAPTLAALEPAIAAGHTRIAVIGIPCQVYALRQIEQTLGLDRLYV 189
Query: 234 LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEE-VPYFCLPAN 292
+GT C DN T E FL PET+ + EF DYKV L+ DG VP+ LP +
Sbjct: 190 IGTPCSDNTTTENFHHFLSLLDDAPETISYLEFRADYKVELRFDDGRAPRVVPFLKLPIS 249
Query: 293 DL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLV 351
L D +C +C DYTN LAD+ VGYMG Q++ RN RG EML+ +
Sbjct: 250 KLDPDFFPLTCKTCVDYTNRLADITVGYMG---------GDGDQWVITRNARGAEMLAAI 300
Query: 352 KNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLE 411
+ + TP G +R ++ A+ G P + P ++ L++F +GP+GLE
Sbjct: 301 SDRITFTPLTDKG-KRGGAVKGFLANTERAAGGMPLRSMPDWLRPLVSFLQPRIGPRGLE 359
Query: 412 FARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
FAR ++ I LH+ R R +P + + E Y+
Sbjct: 360 FARARVEMKAIDTILHLRRT-HPARVKNMVPGHVWSVAEPYD 400
>gi|83592273|ref|YP_426025.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta-like protein
[Rhodospirillum rubrum ATCC 11170]
gi|386348985|ref|YP_006047233.1| coenzyme F420 hydrogenase [Rhodospirillum rubrum F11]
gi|83575187|gb|ABC21738.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Rhodospirillum rubrum ATCC 11170]
gi|346717421|gb|AEO47436.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Rhodospirillum rubrum F11]
Length = 410
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/409 (34%), Positives = 211/409 (51%), Gaps = 21/409 (5%)
Query: 52 PIPPGGT------YPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGR 105
P P G T P++D C+ CGL T AC F+ G E VHGR R
Sbjct: 3 PPPDGATPPSEVALPSRDLCTDCGLSRTATPNRCGRACQFI---RPDYPGQEARVHGRCR 59
Query: 106 RKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDR 165
D+ + G ++++ A P GAQWTGI T +A +L+T V+AV+ + +DP DR
Sbjct: 60 DPARGDELFFGPYQQMYQAALIPPSPGAQWTGITTALAGRLLETRTVDAVLAMAADPADR 119
Query: 166 LSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH 225
P PV+ ++ +G++ +P L+ + AAG KRL G+ CQV ALR++E
Sbjct: 120 WKPLPVIITQAADMARCRGMRMGHAPLLSLIEPAIAAGHKRLAVIGLPCQVHALRAIEAD 179
Query: 226 LNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP 285
L LE+L V+GT C DN T FL + +P++V + EF DY V L+ +G + +P
Sbjct: 180 LGLERLLVIGTPCSDNTTTPRFHDFLGLLADDPDSVTYLEFRADYHVELRFREGGRKLIP 239
Query: 286 YFCLPANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 344
+ LP + L D +C +C DYTN LAD+ VGYM + Q++ VRN+RG
Sbjct: 240 FLKLPLSKLPADFFPLTCKTCVDYTNVLADITVGYMA---------GRGEQWLLVRNDRG 290
Query: 345 KEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINL 404
+ML L+ + + +T S+G RR V +K A G P + P + L A+ +
Sbjct: 291 ADMLGLLGDRIRLTEPTSAGKRRGPVAGFLKNVARAAGGM-PVRAMPDWARPLAAWLMPK 349
Query: 405 VGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
+GP+GLEFAR ++ I LH+ + +R +P++ +V Y
Sbjct: 350 IGPRGLEFARARVEMKAIETVLHLRKD-RPRRLRTMVPAHVWALVAPYG 397
>gi|194337716|ref|YP_002019510.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
domain-containing protein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194310193|gb|ACF44893.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Pelodictyon phaeoclathratiforme BU-1]
Length = 391
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 130/349 (37%), Positives = 193/349 (55%), Gaps = 32/349 (9%)
Query: 93 IEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMV 152
+E E + GR R D D+ G+ + A KPV GAQW+GI+T I+ L+T +V
Sbjct: 21 VENHEKRIFGRVRNPDDSDELRFGISLKRFNATLKKPVNGAQWSGIITRISTMALQTNLV 80
Query: 153 EAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGV 212
+AV+ + +P L P+ VLA+T +++ A+G KP LSP L L +RLL G
Sbjct: 81 DAVLTLHGEP---LQPKAVLAKTAQDIHEARGNKPVLSPVLQALHTAYREKTRRLLVVGA 137
Query: 213 GCQVQALRSVE----HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQ 268
C V +R + +L+ LY++G C DN L + S PETV+++EFMQ
Sbjct: 138 ACHVHMVRDFTRKSPYFADLD-LYIVGIPCTDNLEPSHLQWVFRNISKNPETVINFEFMQ 196
Query: 269 DYKVHLKHLDGHIEEVPYFCLPANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTG 327
DY+VH+ H G +E++P+FCLP+ + V V SC SCFDY N+L+D+ VGY+G P
Sbjct: 197 DYRVHILHKAGKVEKIPFFCLPSAVMKVGVFPNSCLSCFDYINSLSDITVGYLGAP---- 252
Query: 328 ISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDR--------RPFVMETV---KA 376
S + Q+I VR ERG+++L L+ + +E +P + GD +P +M + K
Sbjct: 253 YSKNRKTQWIIVRTERGEKLLDLINDEIETSPEVFFGDSHSAVQAALQPTLMPILQPEKL 312
Query: 377 DDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNY 425
DD M PK++G ++ GP G EFA+YS+D H IRN+
Sbjct: 313 DDRKAM--------PKWLGIYLSRKKAKSGPGGTEFAKYSIDIHAIRNF 353
>gi|304393680|ref|ZP_07375608.1| coenzyme F420 hydrogenase [Ahrensia sp. R2A130]
gi|303294687|gb|EFL89059.1| coenzyme F420 hydrogenase [Ahrensia sp. R2A130]
Length = 454
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/397 (35%), Positives = 208/397 (52%), Gaps = 16/397 (4%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
C+ CG+ + AC F+ + E V HGR + D+ + GVH+ ++ A
Sbjct: 65 CTDCGVSRMADPSACGTACQFIAPEYAESE---MVAHGRAA-SERPDEVHFGVHQRIVRA 120
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG 184
R EGAQWTGI T +A E+L+ G V+AV+ + DD+ P+P L ++ A+G
Sbjct: 121 RMAHSAEGAQWTGITTGLAAELLEQGKVDAVLAMVPSDDDKWRPKPALITDAADMTRARG 180
Query: 185 VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTR 244
++ +P L L AG KRL G+ CQ+ ALR +E L LE+LYV+GT C DN T
Sbjct: 181 MRMGYAPLLALLEPALEAGHKRLAVIGIPCQIHALRKLEAELGLERLYVIGTPCSDNTTT 240
Query: 245 EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVIAPSCY 303
E FL+ PE + + EF DY+V L+ DG E+P+ LP + L D +C
Sbjct: 241 ENFHTFLELLDDRPERITYLEFRADYQVELRFDDGTKREIPFLKLPISKLPSDFFPLTCR 300
Query: 304 SCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISS 363
+C DYTN LAD+ VGYMG TG Q++ VRNERG+E+L+ + + + P S
Sbjct: 301 TCVDYTNRLADITVGYMG---GTG------EQWLIVRNERGEELLADLDDKIITGPVASK 351
Query: 364 GDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIR 423
G R V A+ G P + P +V ++AF + +GPKG EFAR ++ I
Sbjct: 352 GKRESHV-RGFMANVERAAGGLPLRAMPDWVRPIVAFMMPKIGPKGQEFARTRVEMKAIE 410
Query: 424 NYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQ 460
LH+ RA K+ +P++ K+V Y + D+
Sbjct: 411 TVLHL-RAAMPKKMRSMVPAHIWKLVAPYGLVPEKDE 446
>gi|194333446|ref|YP_002015306.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Prosthecochloris aestuarii
DSM 271]
gi|194311264|gb|ACF45659.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Prosthecochloris aestuarii DSM 271]
Length = 381
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 204/361 (56%), Gaps = 17/361 (4%)
Query: 104 GRRKDSLD--DTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSD 161
GR++D D + G+ E A P+ GAQW GI+T +A++ + +EAVV +
Sbjct: 24 GRQRDLHDPVEMRFGITLERFSATLQHPLPGAQWGGIITRMALKAFENNTIEAVVTLHRT 83
Query: 162 PDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRS 221
+++ +PVLA T +E+ ++G KP LSP L +L G+K+LL G C + LR
Sbjct: 84 RENQFFSQPVLAETAQEIYDSRGNKPVLSPVLRSLETAYRKGIKKLLVIGAACHLHVLRD 143
Query: 222 VEH---HLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 278
+ +L +++ +G CVDN R+ LK S P + +H EFMQD+++H++H +
Sbjct: 144 FQERFTYLQDMEIFTIGIPCVDNIDRQRWPWVLKRMSRSPLSAMHMEFMQDFRIHIRHTN 203
Query: 279 GHIEEVPYFCLPANDLVD--VIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQY 336
G +E+VP+F LP +L D + +C SCFDY N+LAD+ VGY+ + + Q+
Sbjct: 204 GMVEKVPFFSLP-QELSDPSIFPVACMSCFDYLNSLADVTVGYLA----AELRPDEKRQW 258
Query: 337 ITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGR----GPSQPAPK 392
+ VR ++GK ++ ++N L P D + FVM T +A + + P + P
Sbjct: 259 VLVRTQKGKTLIDAIRNELTCYPEEGKWDCKKFVMNTAEATIASMKVQSRTYSPDRKIPL 318
Query: 393 FVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
++G++++ ++L GPKG+ FA YS D+H IR+Y +V + ++ ++ +P + + I+E Y
Sbjct: 319 WLGHILSGVLSLAGPKGIGFAHYSTDFHLIRHYYYVRERFPEQ-LERLVPRHVRSILEEY 377
Query: 453 N 453
+
Sbjct: 378 D 378
>gi|302383043|ref|YP_003818866.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Brevundimonas subvibrioides
ATCC 15264]
gi|302193671|gb|ADL01243.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Brevundimonas subvibrioides ATCC 15264]
Length = 415
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 137/391 (35%), Positives = 202/391 (51%), Gaps = 16/391 (4%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSL-DDTYLGVHEELLY 123
C+ CG+ AC F+ +ET VHGR R S D+ + G + ++
Sbjct: 25 CTDCGVSRMEDPTLCGKACQFIKPDYP---AMETRVHGRPRDPASRPDELFFGPVKRMVR 81
Query: 124 ARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAK 183
A P GAQWTGI T I +L+TG V+AV+ + DPDD+ P PVL + +
Sbjct: 82 ASLKTPAPGAQWTGITTRIGERLLETGAVDAVLTMAPDPDDKWRPMPVLVTQASAMAEVR 141
Query: 184 GVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGT 243
G++ +P L L A G +RL G+ CQV ALRS+E L L+ LYV+GT C DN T
Sbjct: 142 GMRMGYAPLLALLEAARAQGYRRLAVIGIPCQVYALRSLEADLGLDALYVVGTPCSDNTT 201
Query: 244 REGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLV-DVIAPSC 302
E +FL S P+T+ + EF DY V L+ DG ++ +P+ LP + L D +C
Sbjct: 202 TERFHEFLALLSEHPDTITYLEFRADYHVELRFTDGRVKTIPFLSLPISQLAPDFFPLTC 261
Query: 303 YSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTIS 362
+C DYTNALAD+ VGYM Q Q++ VRN+RG+E+L L+ + + ++
Sbjct: 262 RTCVDYTNALADITVGYMA---------GQGEQWLLVRNDRGEELLDLLGDEVVLSEPGD 312
Query: 363 SGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTI 422
G R+ V + + A G P + P +V ++++ GP+GLEFAR L+
Sbjct: 313 KGRRKVAVAGFITNVERAAGGL-PLRRMPDWVRPIVSWLQPRTGPRGLEFARTRLEMKAA 371
Query: 423 RNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
+H+ R +R +P + K+VE Y
Sbjct: 372 ETVIHLRRE-EPRRMKSMIPDHVWKLVEPYG 401
>gi|110597779|ref|ZP_01386063.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Chlorobium ferrooxidans DSM 13031]
gi|110340686|gb|EAT59166.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
[Chlorobium ferrooxidans DSM 13031]
Length = 399
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/399 (34%), Positives = 204/399 (51%), Gaps = 20/399 (5%)
Query: 65 CSRCGLCDTYYIAHVK--DACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
CS CGLC + +C F + ET + GR R +++ G+
Sbjct: 6 CSSCGLCSIKKWPSTESLQSCVFNTGWLGE---HETALFGRERDPLDPEESRFGITSSRF 62
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
AR V AQW+GI+T +A + L + +VE VV + +D P PVLA + +++L A
Sbjct: 63 VARLRTAVPDAQWSGIITRLAEKALNSKLVEGVVTLHRHEEDFFHPIPVLAGSEKDILKA 122
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHL----NLEKLYVLGTNC 238
KG P LSP L +L + G+KRLL G C + ALR N+E +Y +G C
Sbjct: 123 KGSIPVLSPVLRSLEEAHSKGLKRLLVIGAACHIHALRDFHRRFDYLRNME-IYTIGIPC 181
Query: 239 VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVI 298
VDN + L+ S P T H EFM DY+VH+KHLDGHIE++P+F LP I
Sbjct: 182 VDNANEKKWPWILERISKSPATARHIEFMPDYRVHVKHLDGHIEKIPFFSLPEELTNPEI 241
Query: 299 AP-SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEI 357
P SC SCFDY N LAD+ VGY+ P + Q++ VR E+G + +L+ + LE
Sbjct: 242 FPHSCLSCFDYLNGLADITVGYLAAPFKNRSKL----QWVLVRTEKGSVLNNLIADELET 297
Query: 358 TPTISSGDRRPFVMETVKADDNA----KMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFA 413
P + FV + K+ + K ++ P G+LI+ F+ GP+G+ FA
Sbjct: 298 FPESGEWECFKFVAASAKSSAESMKCQKKEFRTTRKIPVAAGHLISEFLFRTGPRGVGFA 357
Query: 414 RYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
+S+D+H I++Y V + + ++ +P + I+E Y
Sbjct: 358 HFSVDHHLIKHYYFVKFNY-PQHLERLVPPHVYTILEEY 395
>gi|381166492|ref|ZP_09875706.1| Coenzyme F420 hydrogenase [Phaeospirillum molischianum DSM 120]
gi|380684065|emb|CCG40518.1| Coenzyme F420 hydrogenase [Phaeospirillum molischianum DSM 120]
Length = 411
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 131/401 (32%), Positives = 206/401 (51%), Gaps = 15/401 (3%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP A+ C+ CG+ AC F+ + GLE +HGR R D+
Sbjct: 14 PPYDDAVARPLCTDCGVSRRSDPRACSRACQFIHPDHA---GLEARIHGRVRDPARPDEL 70
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
+ G ++ A +P GAQWTG+ T +A +L++G V+AV+ + +DP D P PVL
Sbjct: 71 HFGPFLKMWQAALKEPKPGAQWTGLTTRLAERLLESGKVDAVLTMAADPQDSWRPMPVLV 130
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYV 233
PE + +G++ +P L+ L G +RL GV CQ+ LR +E L E+LYV
Sbjct: 131 TRPEGMAVCRGMRMGYAPLLSGLEPALERGYRRLAVIGVPCQIHPLRVLEPDLGFEQLYV 190
Query: 234 LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 293
+G C DN T E FL + P+ V + EF DY V ++ DG +E+P+ LP +
Sbjct: 191 IGIPCSDNTTTEKFHDFLALLTDTPDRVTYLEFRADYHVEMRFADGGKKEIPFLKLPISK 250
Query: 294 L-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 352
L D +C +C DY N+L+DL VGYM + Q++ VRN +G+E+LSL+
Sbjct: 251 LPPDFFPLTCRTCVDYVNSLSDLTVGYMA---------GRGEQWLLVRNRKGEEILSLLG 301
Query: 353 NLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEF 412
+ + +T S+G R+ V +K + A G P + P + ++A+ + +GP+GLE
Sbjct: 302 DEVRLTEPTSAGKRQGAVSGFIKNTERAAGGL-PMRGMPDWARPIVAWLMPKIGPRGLEL 360
Query: 413 ARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
AR L+ + +H+ R +R +P++ +VE Y
Sbjct: 361 ARARLEMKAAESVIHL-RLQQPRRMAAMIPAHVWTLVEPYG 400
>gi|374618889|ref|ZP_09691423.1| coenzyme F420-reducing hydrogenase, beta subunit [gamma
proteobacterium HIMB55]
gi|374302116|gb|EHQ56300.1| coenzyme F420-reducing hydrogenase, beta subunit [gamma
proteobacterium HIMB55]
Length = 401
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 136/406 (33%), Positives = 204/406 (50%), Gaps = 23/406 (5%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
P + C+ CG+ T AC F+ +R LE HGR R+ + + + GV E
Sbjct: 13 PHRKLCTDCGISRTSEPGRCGYACQFISPDYAR---LEEQTHGRVRQPEGDVEPFFGVVE 69
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEV 179
E+ A GAQWTGI T + +L +G V AV+CV D +D P P L +++
Sbjct: 70 EMHQAALAPKRNGAQWTGITTRLGEALLASGDVSAVLCVGPDANDPWKPVPRLITDAQDM 129
Query: 180 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCV 239
+ +G++ +P L L A G KR+ G+ CQ+ ALRS+E L LE L V+GT C
Sbjct: 130 ASCRGMRMGYAPLLELLEPAIADGHKRIAVIGIPCQIYALRSLEKELGLEHLVVIGTPCS 189
Query: 240 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIA 299
DN T E +FL PE + + EFM D+ V L+ G +P+ LP DL D
Sbjct: 190 DNTTTENFHEFLSLLDRNPERINYLEFMPDFHVELRFDTGKKRRIPFLQLPIADLRDDFF 249
Query: 300 P-SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEIT 358
P +C +C DY N L+D+ VGYMG + Q++ VRN++G++ L+ +++ L +
Sbjct: 250 PLTCRTCVDYVNTLSDITVGYMG---------GRGDQWLLVRNQKGEKALNAIRSELTLK 300
Query: 359 PTISSGDR----RPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFAR 414
+SG R R F+ T +A G P + P+++ ++ + L GPKGLEFAR
Sbjct: 301 APSTSGKRHAAVRGFIENTRRA-----TGGLPLRRMPQWLRPIVGKIMPLTGPKGLEFAR 355
Query: 415 YSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQIDQ 460
L+ + LH+ R KR +P + K+ E Y D+
Sbjct: 356 TRLEMKAAESILHLRRT-APKRLRTMVPPHVWKLAEPYGLTPSEDE 400
>gi|189346478|ref|YP_001943007.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Chlorobium limicola DSM 245]
gi|189340625|gb|ACD90028.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chlorobium limicola DSM 245]
Length = 381
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 196/367 (53%), Gaps = 15/367 (4%)
Query: 96 LETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAV 155
LE + GR R D + G+ E AR + + AQW+GI+T +A+ + +V+ V
Sbjct: 18 LERQLFGRERSLDDPVEMRFGITAERFTARMKQRIPDAQWSGIITAMALRAFERKLVDGV 77
Query: 156 VCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQ 215
V + + + PVLA + +E+ A++G KP LSP L +L G+K++L G C
Sbjct: 78 VTLHRHTEQQFFSVPVLACSSDEIYASRGNKPVLSPVLRSLQTAYRQGLKKILVIGAACH 137
Query: 216 VQALRSVEH---HLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKV 272
+ LR +L +++ +G CVDN R L+ S+ P T H EFMQD+++
Sbjct: 138 LHMLRDFRERFPYLQEMEIFTIGIPCVDNIDRSRWTWVLERISASPATARHMEFMQDFRI 197
Query: 273 HLKHLDGHIEEVPYFCLPANDLVD--VIAPSCYSCFDYTNALADLVVGYMGVPKYTGISM 330
H++H DG E++PYF LP +L D + +C SCFDY N+L+D+ +GY+ ++
Sbjct: 198 HIRHSDGSTEKIPYFSLP-QELSDPAIFPKACMSCFDYLNSLSDITIGYLAAE----LTP 252
Query: 331 TQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPA 390
Q Q++ VR E+G+E+L LV + LE P F+ +T G + A
Sbjct: 253 QQDRQWVLVRTEKGRELLDLVNHELERFPEWGEWKCEGFIRQTAGGIIEQMKDTGKTYAA 312
Query: 391 ----PKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAK 446
P+++G+L++ + +GPKG+ FA YS DYH IR+Y +V R ++ +P++
Sbjct: 313 EPLIPQWIGHLLSTTMGFIGPKGIGFAHYSADYHMIRHYYYV-RYRLPDHLERLVPAHVP 371
Query: 447 KIVEMYN 453
I+E Y
Sbjct: 372 VILEEYG 378
>gi|126734589|ref|ZP_01750335.1| coenzyme F420 hydrogenase, beta subunit, putative [Roseobacter sp.
CCS2]
gi|126715144|gb|EBA12009.1| coenzyme F420 hydrogenase, beta subunit, putative [Roseobacter sp.
CCS2]
Length = 404
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 127/385 (32%), Positives = 198/385 (51%), Gaps = 20/385 (5%)
Query: 50 SKPIPPGGTYPA-KDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
+KP P PA + C+ CG+ + AC F+ E +HGR + D
Sbjct: 2 TKPASPQFATPAPRGLCTDCGVSRMADPSACGKACQFI---KPDYPAAEAAIHGRPAQSD 58
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
D+ + GV + + A +GAQWTG+ T A +L+TG V+AV+ + D D+ P
Sbjct: 59 G-DEQFFGVTQAMYRAALIPARDGAQWTGLTTRFAERLLETGAVDAVLTMVPDDADKWRP 117
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNL 228
RP + ++ A+G++ +P L L AAG +++ G+ CQ+ ALR++E L
Sbjct: 118 RPAIITKAADMKHARGMRMGYAPLLALLEPAHAAGHRKIAVIGIPCQIYALRALEADLGF 177
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
E++YV+GT C DN T E FL + PETV + EF DY V L+ DG +P+
Sbjct: 178 ERIYVIGTPCSDNTTTENFHSFLARLTDAPETVTYLEFRADYHVELRFTDGTQRLIPFLK 237
Query: 289 LPANDL-VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
LP +DL D +C +C DYTN LAD+ VGYM + Q++ VRN+RG EM
Sbjct: 238 LPLSDLPADFFPTTCRTCVDYTNRLADITVGYMA---------GEGDQWLIVRNDRGAEM 288
Query: 348 LSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRG--PSQPAPKFVGNLIAFFINLV 405
L+ + + + + P S G R V V +N ++ G P + P ++ ++ + + +
Sbjct: 289 LASLGDEVTLAPPGSRGKRAGSVKGFV---ENTRLAAGGLPLRRMPSWLRGIMGWLMPRI 345
Query: 406 GPKGLEFARYSLDYHTIRNYLHVNR 430
GP+G+EFAR ++ LH+ R
Sbjct: 346 GPRGVEFARARVEMKAAETILHLRR 370
>gi|84514573|ref|ZP_01001937.1| possible coenzyme F420 hydrogenase beta subunit [Loktanella
vestfoldensis SKA53]
gi|84511624|gb|EAQ08077.1| possible coenzyme F420 hydrogenase beta subunit [Loktanella
vestfoldensis SKA53]
Length = 410
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/369 (34%), Positives = 188/369 (50%), Gaps = 19/369 (5%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
C+ CG+ + AC F+ +E VHGR D+ + GV + A
Sbjct: 17 CTDCGVSRMADASACGKACQFI---KPDYPAMEARVHGRAAGMQG-DEPFFGVTGAMYRA 72
Query: 125 RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG 184
+GAQWTG+ T +A +L+TG V+AV+ + +DP DR PRP + ++ A+G
Sbjct: 73 ALQPARQGAQWTGLTTRLAERLLETGAVDAVLTMVADPADRWRPRPAIITDAADMAEARG 132
Query: 185 VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTR 244
++ +P L L AAG +R+ G+ CQ+ ALR++E L E++YV+GT C DN T
Sbjct: 133 MRMGYAPLLALLEPARAAGHRRIAVIGIPCQIYALRALEAQLGFERIYVIGTPCSDNTTT 192
Query: 245 EGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVIAPSCY 303
E FL + P+TV + EF DY V L+ DG +P+ LP DL D +C
Sbjct: 193 ENFHGFLARLTDAPDTVTYLEFRADYHVELRFADGSERLIPFLKLPIADLPRDFFPTTCR 252
Query: 304 SCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISS 363
+C DYTN LAD+ VGYM + Q++ VRN RG+EML + + + S
Sbjct: 253 TCVDYTNRLADITVGYMA---------GEGEQWLIVRNVRGQEMLDGLGAEVTLAAPGSR 303
Query: 364 GDRRPFVMETVKADDNAKMGRG--PSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHT 421
G R V V +N ++ G P + P F+ ++ + + +GP+GLEFAR L+
Sbjct: 304 GKRAGAVKGFV---ENTRLAAGGLPLRRMPDFMRGIMGWLMPKIGPRGLEFARARLEMKA 360
Query: 422 IRNYLHVNR 430
LH+ R
Sbjct: 361 AETILHLRR 369
>gi|219886623|gb|ACL53686.1| unknown [Zea mays]
gi|414869975|tpg|DAA48532.1| TPA: hypothetical protein ZEAMMB73_316791 [Zea mays]
gi|414869976|tpg|DAA48533.1| TPA: hypothetical protein ZEAMMB73_316791 [Zea mays]
gi|414869977|tpg|DAA48534.1| TPA: hypothetical protein ZEAMMB73_316791 [Zea mays]
gi|414869978|tpg|DAA48535.1| TPA: hypothetical protein ZEAMMB73_316791 [Zea mays]
Length = 215
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/131 (71%), Positives = 111/131 (84%), Gaps = 1/131 (0%)
Query: 38 KSVKLREDWRKRSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLE 97
++ +REDWR++SKPIPPG YPAKDHCSRCGLCDTYY+AHVK ACAFLGDGMSR+E LE
Sbjct: 43 RAKAVREDWRQKSKPIPPGAVYPAKDHCSRCGLCDTYYVAHVKTACAFLGDGMSRVEDLE 102
Query: 98 TVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVC 157
VHGRG RK+ +D+ Y GV+++LLYARKT+PVEGAQWTGIVTTIA+EMLK MV+AVVC
Sbjct: 103 RQVHGRG-RKEGMDEMYFGVYDQLLYARKTEPVEGAQWTGIVTTIAVEMLKANMVDAVVC 161
Query: 158 VQSDPDDRLSP 168
VQ P+ P
Sbjct: 162 VQRHPNKNQMP 172
>gi|350553887|ref|ZP_08923041.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thiorhodospira sibirica ATCC 700588]
gi|349789527|gb|EGZ43476.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thiorhodospira sibirica ATCC 700588]
Length = 429
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 193/404 (47%), Gaps = 24/404 (5%)
Query: 54 PPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
PP +D C+ CG+ T AC F+ + LE VHGR R D+
Sbjct: 30 PPLAAPRDRDLCTDCGISRTANPERCARACQFVKPDYA---ALEKRVHGRERNPQD-DEL 85
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
+ G + + A GAQWTGI T IA +L+T V+AV+ V DP D P PVL
Sbjct: 86 FFGPYTAMYQAALIHERPGAQWTGITTRIAERLLETQAVDAVLTVAPDPQDSWRPVPVLV 145
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYV 233
P + +G++ +P L L A G RL V CQV ALR +E L E+L V
Sbjct: 146 TDPAALRECRGMRMGYAPLLALLEPALAQGYTRLAVIAVPCQVHALRVLEPELGFERLEV 205
Query: 234 LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 293
+G C DN T FL PE + + EF DY+V L+ DG +P+ LP +
Sbjct: 206 IGIPCSDNTTTAHFHHFLSLLDPHPEQITYLEFRADYQVELRFTDGQKRTIPFLQLPLST 265
Query: 294 LVDVIAP-SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 352
L P C +C DYTN+LAD+ VGYMG + Q++ VRN +G+ +L V
Sbjct: 266 LSPHFFPLPCKTCVDYTNSLADITVGYMG---------GRGEQWLLVRNTKGQALLQQVD 316
Query: 353 NLLEITPTISSGDR----RPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPK 408
L S G R R F+ T +A G P + PK++ L+A+ + +GPK
Sbjct: 317 GELRKKDPSSEGKRHTAVRGFIQNTQRA-----AGGLPLRSTPKWIRPLVAWLMPKIGPK 371
Query: 409 GLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
GLEFAR ++ + LH+ RA R + +P + I++ Y
Sbjct: 372 GLEFARARVEMKAAESVLHLRRA-RPNRVAQMIPPHLWTILKPY 414
>gi|119356531|ref|YP_911175.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Chlorobium
phaeobacteroides DSM 266]
gi|119353880|gb|ABL64751.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Chlorobium phaeobacteroides DSM 266]
Length = 352
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 187/346 (54%), Gaps = 29/346 (8%)
Query: 124 ARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAK 183
A+ KP+ G+QW+G++T +A K +VE VV +Q PD +PVLA++ +E+ + +
Sbjct: 17 AQLKKPIPGSQWSGMITRMATRGFKEKLVEGVVSLQRTPDHHFFSQPVLAQSFDEIHSTR 76
Query: 184 GVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK---LYVLGTNCVD 240
G KP LS L +L G+K++L G C + LR + + K + +G CVD
Sbjct: 77 GNKPVLSHVLYSLQTASRQGMKKILVIGAACHLHTLRDFQERFDYFKEMEILTIGIPCVD 136
Query: 241 NGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVD--VI 298
N R LK S P+T H EFMQD+++H++H G +E++P+F LP +L + +
Sbjct: 137 NIARSKWPWVLKRMSQSPDTARHIEFMQDFRIHIRHDGGRVEKIPFFSLP-EELANPGIF 195
Query: 299 APSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEIT 358
P+C SC D N+LAD+ VGY+ + Q+ Q++ VR E GK++ L++ L+
Sbjct: 196 PPACMSCVDDLNSLADITVGYLE----AKLLPDQNRQWVLVRTETGKKLPKLIEAELDRF 251
Query: 359 PTISSGDRRPFV-------METVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLE 411
+ + R FV +E++K D R + P + G+ +A ++GPKG
Sbjct: 252 EEFGNRECRSFVQSSSKRIIESMKELDKEYSSR---RKIPVWFGHTLAGVFGMIGPKGKG 308
Query: 412 FARYSLDYHTIRNYLHVNRAWGKKRADKHM----PSYAKKIVEMYN 453
FARYS+D+H IR+Y +V K R +H+ P + + I+E Y
Sbjct: 309 FARYSVDFHLIRHYYYV-----KFRYPEHLETLVPRHVRVILEEYR 349
>gi|121998419|ref|YP_001003206.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
[Halorhodospira halophila SL1]
gi|121589824|gb|ABM62404.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Halorhodospira halophila SL1]
Length = 419
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/393 (33%), Positives = 196/393 (49%), Gaps = 15/393 (3%)
Query: 62 KDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEEL 121
+D C+ CGL + AC F+ + LE HGR R + D+ + G +
Sbjct: 17 RDLCTDCGLSRSSDPKRCGRACQFIRPDYA---ALERRTHGRSRDPERPDELHFGPFRRM 73
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLA 181
A P GAQWTGI T +A +L++G V+AV+ V +D P+PVL P ++
Sbjct: 74 HQAALRTPRAGAQWTGITTRLAERLLESGRVDAVLTVTGASEDPWHPQPVLVTDPAKLSQ 133
Query: 182 AKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDN 241
+G++ +P L L A G KRL + CQ LR++E L LE+L ++GT C DN
Sbjct: 134 CRGMRMGYAPLLALLEPALAQGYKRLGVIALPCQTYPLRALEEELGLERLEIIGTPCSDN 193
Query: 242 GTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDL-VDVIAP 300
+FL+ + PE V + EF DY V L+ DG E+P+ LP + L D
Sbjct: 194 TPTAHFHRFLELLTPSPEAVTYLEFRADYYVELRFQDGSKREIPFLQLPISRLPADFWPL 253
Query: 301 SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPT 360
+C +C DYTNALAD+ VGYM + Q+I VRNERG+ ML L+ + + +
Sbjct: 254 TCRTCVDYTNALADITVGYMA---------GRGEQWILVRNERGEAMLELLGDEVRLG-A 303
Query: 361 ISSGDRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYH 420
SSG RR ++ + G PS+ P ++ +I + VGP+GLE AR L+
Sbjct: 304 PSSGGRRDGPVQGFIDNTERAAGGMPSRGMPNWLRPIIGRLMPFVGPRGLELARARLEMK 363
Query: 421 TIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYN 453
+H+ +RA +P + ++VE Y
Sbjct: 364 AAETLIHLQHQ-APRRARAMVPEHVYRLVEGYR 395
>gi|308800482|ref|XP_003075022.1| unnamed protein product [Ostreococcus tauri]
gi|116061576|emb|CAL52294.1| unnamed protein product [Ostreococcus tauri]
Length = 163
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 68/108 (62%), Gaps = 11/108 (10%)
Query: 56 GGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYL 115
G YP ++HCS CGLC+T ++A V+ AC FL +VVHGR R+ D+ L
Sbjct: 36 GPAYPTREHCSECGLCETEHVARVRGACEFL-----------SVVHGRARKVSPDDEDRL 84
Query: 116 GVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPD 163
GV + YA + V+G+QWTG+VT++A ML++ M E V+CV SDPD
Sbjct: 85 GVVDGTFYAVTKQSVDGSQWTGLVTSVAKRMLESRMFEGVICVTSDPD 132
>gi|116753495|ref|YP_842613.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit [Methanosaeta
thermophila PT]
gi|116664946|gb|ABK13973.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanosaeta thermophila PT]
Length = 362
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 126/265 (47%), Gaps = 34/265 (12%)
Query: 68 CGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKT 127
CGLC Y D F E + GR R + + LG++ + AR T
Sbjct: 59 CGLCYAYCPRSFFDMPFF-----------EKKLFGRSRASEEV----LGIYRSAMAARAT 103
Query: 128 KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVK 186
PV G Q G+VT + + L+TG+++ V +D + R P +A TPEE++AA G K
Sbjct: 104 -PVRGKVQDGGVVTALLVHALETGVIDCAVV--TDRNSRWQTTPKVATTPEEIIAAAGTK 160
Query: 187 PTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE-----HHLNLEKL-YVLGTNCVD 240
T++P++ + + +G ++ F G CQ+QALR + + E++ ++G C++
Sbjct: 161 YTIAPSIAGVQMAINSGFTKIGFTGTPCQIQALRKAQLLDEPYQFGQERIALMIGLFCME 220
Query: 241 NGTREGLDKFL--KAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVI 298
N + L L + + +P V +E +Q + +G E +P + +
Sbjct: 221 NFDYQRLMTGLVKEKMNLQPTDVERFE-IQRGMFRVISKEGTKE------VPLQETDEFT 273
Query: 299 APSCYSCFDYTNALADLVVGYMGVP 323
P C CFD+T LAD+ VG +G P
Sbjct: 274 WPGCGPCFDFTAELADVSVGSVGSP 298
>gi|284162685|ref|YP_003401308.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Archaeoglobus profundus DSM
5631]
gi|284012682|gb|ADB58635.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Archaeoglobus profundus DSM 5631]
Length = 337
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 147/313 (46%), Gaps = 41/313 (13%)
Query: 60 PAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHE 119
P ++C CG+C Y + V + + + IE + G R+ D++ G +
Sbjct: 37 PVAENCEHCGVC--YDVCPVN----YFSESKAEIE-----IFGEKRKDDAI-----GYYR 80
Query: 120 ELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPE 177
E+L R T AQ G VT I +L++G +++ V + D+ +P+P++A + E
Sbjct: 81 EILAGRATDENIRSKAQDGGAVTAILTYLLESGAIDSAVV--TGRDESWNPKPIVAISKE 138
Query: 178 EVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE---HHLNLEKL-YV 233
++LA+ G K T L + G K + G+ C V+A+R+ + H L EK+ V
Sbjct: 139 DLLASTGSKYTQCLVLLGVKDAIKMGKKSIALVGLPCHVKAIRNAQMSGHSLGAEKVSVV 198
Query: 234 LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 293
LG C++ +R+ L L+ + E V ++ + + + G ++ +P +
Sbjct: 199 LGLFCMETFSRDLLKHKLEEIGVKIEDVEKFDIKKGK--LMAWVKGEVKTIPL-----KE 251
Query: 294 LVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML--SLV 351
L D + SC C D+T AD+ G +G G S I +R++RG++++ ++
Sbjct: 252 LKDAVRTSCKFCNDFTAEFADISFGSVGSD--DGWST------IIIRSDRGEKIVKGAVD 303
Query: 352 KNLLEITPTISSG 364
+ LE+ P G
Sbjct: 304 QGYLEVQPITEKG 316
>gi|440756422|ref|ZP_20935623.1| hypothetical protein O53_4831 [Microcystis aeruginosa TAIHU98]
gi|440173644|gb|ELP53102.1| hypothetical protein O53_4831 [Microcystis aeruginosa TAIHU98]
Length = 107
Score = 85.5 bits (210), Expect = 6e-14, Method: Composition-based stats.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKD 108
++K + P PAK+ CS CGLCDTYYI +VK+ACAFL +I LE HG+ R +
Sbjct: 9 KAKALKPNSRRPAKELCSECGLCDTYYIHYVKEACAFLN---QQIADLEAAAHGKSRDLN 65
Query: 109 SLDDTYLGVHEELLYARKTKPVEG 132
+D Y GVH+E++ A+K K +G
Sbjct: 66 KENDLYFGVHQEMMAAKKNKLFQG 89
>gi|20094365|ref|NP_614212.1| coenzyme F420-reducing hydrogenase subunit beta [Methanopyrus
kandleri AV19]
gi|19887430|gb|AAM02142.1| Coenzyme F420-reducing hydrogenase, beta subunit [Methanopyrus
kandleri AV19]
Length = 305
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 35/265 (13%)
Query: 111 DDTYLGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDR--- 165
D LG H + AR T K + Q GI + + I L+ G+ + V+ +DPDD
Sbjct: 12 DPELLGDHLGVFTARSTERKVTKVTQDGGIASAVMIYGLEEGLFDGVIAAVADPDDPEEP 71
Query: 166 LSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVE- 223
PRPV+ P+EVL A G K T PN++ L V + G +++ G CQ++A+R +
Sbjct: 72 WKPRPVVITDPDEVLEAAGTKYTYCPNVSVLKEAVRSYGCEKVAMVGTPCQIRAVRKAQL 131
Query: 224 -----HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 278
H+ + ++G C++N EG+ ++ + + + K + D
Sbjct: 132 CPIGMRHVPDKIELLIGIICMENFPYEGMKTIIEQLCGVWIREVTKMDIGNGKFWVYTKD 191
Query: 279 GHIEEVPYFCLPANDLVDVIAP----SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP 334
G ++ +P +D P C+ C DY L+DL G +G P G S
Sbjct: 192 GEVKSIP---------IDETHPFEGEPCHVCTDYCAELSDLTAGSVGSPD--GWST---- 236
Query: 335 QYITVRNERGKEMLS--LVKNLLEI 357
+ VR E+ KE+L + + LLE+
Sbjct: 237 --VIVRTEKAKEILDDMVEQGLLEV 259
>gi|386003032|ref|YP_005921331.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanosaeta harundinacea 6Ac]
gi|357211088|gb|AET65708.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanosaeta harundinacea 6Ac]
Length = 366
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 124/268 (46%), Gaps = 34/268 (12%)
Query: 63 DHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELL 122
D+ CGLC Y + D + G+ V GR RR +D LG++ +
Sbjct: 54 DYDPLCGLCYAYCPRTMLD-----------MPGMAKRVFGRERR----EDEPLGIYRKAA 98
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
AR K AQ G+ T + I L+ G+++ V + D D+ P +A T EE+ AA
Sbjct: 99 SARAVKAGARAQDGGVATALLIGALEAGIIDCAVVTERD--DKWRGLPKVATTAEEIAAA 156
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE-----HHLNLEKLYVL-GT 236
G K T++P++ + + G K++ F G CQ+QALR V+ + EK+ +L G
Sbjct: 157 AGTKYTITPSVTGVQMAMDQGFKKIGFVGTPCQIQALRKVQLLEEPYQFGQEKIALLVGL 216
Query: 237 NCVDNGTREGLDKFLKAA--SSEPETVLHYEFMQDYKVHLKHLDGH-IEEVPYFCLPAND 293
C++N E L L + E V +E K + L G ++EVP L D
Sbjct: 217 FCMENFEHELLFPHLVEGKFGFKAEEVDKFEVQ---KGMFRVLSGDMVKEVP---LEETD 270
Query: 294 LVDVIAPSCYSCFDYTNALADLVVGYMG 321
D + C CFD+ LAD+ VG +G
Sbjct: 271 --DYVWKGCGPCFDFAAELADVSVGSVG 296
>gi|340624110|ref|YP_004742563.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis X1]
gi|339904378|gb|AEK19820.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis X1]
Length = 282
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 26/245 (10%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++ + AR T ++ +Q GI++ I L+ G+++ V+ ++ +D P +
Sbjct: 4 FGTYKTAISARATDKAILKKSQDGGIISASYIYGLENGLLDGVIV--ANTEDGFKAAPKI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSVE------HH 225
A TPEEVL+A G K T+SPN++ L V ++++ G CQV+A+R + H
Sbjct: 62 ATTPEEVLSAAGTKYTVSPNVSVLKDAVREYALEKVGIVGTPCQVRAIRKLMKYPMGFRH 121
Query: 226 LNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 284
+ + V+G C++N + EG+ ++ A VL + + K + G ++ V
Sbjct: 122 TDSKIALVMGIFCMENFSYEGMKAIVEQYAGIRMNDVLKTDIGKG-KFWVYSKSGDVKAV 180
Query: 285 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 344
P D SC+ C DYT LAD+ G +G P G S I VR +G
Sbjct: 181 PL-----KDTHMYEQKSCHVCMDYTAELADISTGSVGSPD--GWST------IFVRTAKG 227
Query: 345 KEMLS 349
+E L+
Sbjct: 228 EEYLN 232
>gi|21229144|ref|NP_635066.1| coenzyme F420-reducing hydrogenase subunit beta [Methanosarcina
mazei Go1]
gi|20907706|gb|AAM32738.1| Coenzyme F420 hydrogenase, beta subunit [Methanosarcina mazei Go1]
Length = 294
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 129/261 (49%), Gaps = 29/261 (11%)
Query: 112 DTYLGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPR 169
D YLG + + AR T + ++ AQ GI T + + L+ G+++ + V + D PR
Sbjct: 7 DPYLGKYITCVSARSTDKEILKKAQDGGIATALMVYALEEGIIDGTI-VAGEGDRPWEPR 65
Query: 170 PVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSVE-HHLN 227
P++A + E++L A+G K ++SP + L + G+ ++ GV CQ+QA+R + + +N
Sbjct: 66 PIVAMSREDILKARGTKYSISPQIAWLKEATRSFGLDKVGVTGVCCQMQAVRKAQLYPIN 125
Query: 228 LEKL-----YVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGH 280
+ + +G C++N + L ++ A+ +V E + + VH + G+
Sbjct: 126 MRDVPGKVALTVGLFCMENFPYKSLQTIVEDHAAQSLGSVKKMEITKGKFWVHTER--GN 183
Query: 281 IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVR 340
+ VP L A + P C+ C DY ++LAD+ G +G P G S + +R
Sbjct: 184 VSTVP---LKATHKYE--QPGCHVCLDYVSSLADISTGSVGSPD--GWST------VFIR 230
Query: 341 NERGKEMLS--LVKNLLEITP 359
++G E+ S + + E P
Sbjct: 231 TKKGNEVWSKAVAAGMFETKP 251
>gi|45358380|ref|NP_987937.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis S2]
gi|44921138|emb|CAF30373.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis S2]
Length = 282
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 26/245 (10%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++ + AR T ++ +Q GI++ I L+ G+++ V+ ++ D P +
Sbjct: 4 FGTYKTAISARATDKAILKKSQDGGIISASYIYGLENGLLDGVIVANTE--DGFKAAPKI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSVE------HH 225
A TPEEVL+A G K T+SPN++ L V ++++ G CQV+A+R + H
Sbjct: 62 ATTPEEVLSAAGTKYTVSPNVSVLKDAVREYALEKVGIVGTPCQVRAIRKLMKYPMGFRH 121
Query: 226 LNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 284
+ + V+G C++N EG+ ++ A VL + + K + G ++ V
Sbjct: 122 TDSKIALVMGIFCMENFPYEGMKAIVEQYAGIRMNDVLKTDIGKG-KFWVYSKSGDVKAV 180
Query: 285 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 344
P D SC+ C DYT LAD+ G +G P G S I VR +G
Sbjct: 181 PL-----KDTHMYEQKSCHVCMDYTAELADISTGSVGSPD--GWST------IFVRTAKG 227
Query: 345 KEMLS 349
+E L+
Sbjct: 228 EEYLN 232
>gi|73667996|ref|YP_304011.1| coenzyme F420-reducing hydrogenase subunit beta [Methanosarcina
barkeri str. Fusaro]
gi|85682155|sp|P80490.2|FRHB_METBF RecName: Full=Coenzyme F420 hydrogenase subunit beta; AltName:
Full=8-hydroxy-5-deazaflavin-reducing hydrogenase
subunit beta; Short=FRH
gi|2463282|emb|CAA74093.1| F420-reducing hydrogenase isoenzyme II beta subunit [Methanosarcina
barkeri]
gi|72395158|gb|AAZ69431.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanosarcina
barkeri str. Fusaro]
Length = 291
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 126/261 (48%), Gaps = 25/261 (9%)
Query: 110 LDDTYLGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
++D YLG + + AR T + ++ AQ GI T + + L+ G ++ + V + D
Sbjct: 2 IEDPYLGKYVTCVSARSTDKEILKKAQDGGIATALMVYALEEGFIDGTI-VAGEGDKPWQ 60
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSVE-HH 225
P+P +A T EE+L A+G + ++SP ++ L + G+ ++ GV CQ+QA+R + +
Sbjct: 61 PKPEVAMTREEILKARGTRYSISPQISWLKEATRSFGLDKVGVTGVCCQMQAVRKAQLYP 120
Query: 226 LNLEKL-----YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGH 280
+N+ + + +G C++N + L ++ +++ + + K + G+
Sbjct: 121 INMRDVPGKVAFTVGLFCMENFPYKSLQSIVEDHANQSLGSVKKMEITKGKFWVYTERGN 180
Query: 281 IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVR 340
+ VP L A + P C+ C DY + LAD+ G +G P G S + +R
Sbjct: 181 VATVP---LKATHKYE--QPGCHVCLDYVSNLADISTGSVGSPD--GWST------VFIR 227
Query: 341 NERGKEMLS--LVKNLLEITP 359
+ G E+ S + + E P
Sbjct: 228 TKVGNEIWSKAVADGMFETKP 248
>gi|395644720|ref|ZP_10432580.1| coenzyme F420 hydrogenase, subunit beta [Methanofollis liminatans
DSM 4140]
gi|395441460|gb|EJG06217.1| coenzyme F420 hydrogenase, subunit beta [Methanofollis liminatans
DSM 4140]
Length = 287
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 15/218 (6%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++ + AR T + ++GAQ GIVT + L+ G+++ + V D+ P P++
Sbjct: 3 LGNYKTCVAARSTDKEILKGAQDGGIVTQLFAYALEEGIIDGAI-VAGPSDEPWKPEPIV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSVE-HHLNLEK 230
A T E+LAA+G K TLSPN++ L + G+ R+ G CQ+QA+R + + + +
Sbjct: 62 ATTKAELLAARGTKYTLSPNISLLKEATRSYGLDRVGIVGTPCQMQAVRKAQLYPVGMRD 121
Query: 231 L-----YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP 285
+ +G C++N + ++ + E L E ++ + + E
Sbjct: 122 VPDKIALAIGIFCMENFPYQSIEALV-----EDHCNLKMESVKKLDIGKGKFWAYTERGA 176
Query: 286 YFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
+P P C+ C DY + LAD+ G +G P
Sbjct: 177 VAQIPLKVTHKYEQPGCHVCLDYVSNLADVSTGSVGTP 214
>gi|288561317|ref|YP_003424803.1| coenzyme F420 hydrogenase beta subunit FrhB1 [Methanobrevibacter
ruminantium M1]
gi|288544027|gb|ADC47911.1| coenzyme F420 hydrogenase beta subunit FrhB1 [Methanobrevibacter
ruminantium M1]
Length = 281
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 16/218 (7%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G +++++ AR T K ++ AQ GIVT + L+ ++E + V + +D P P +
Sbjct: 3 FGTYKDVVSARATDKAIQKVAQDGGIVTALLTYALEENIIEGAI-VAGNTEDPWKPEPTI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVEHH-----L 226
A TPEE++AA G K T SPN L V G++++ G CQ+ LR ++ +
Sbjct: 62 AMTPEEIIAAAGTKYTFSPNAIRLKEAVRQYGLEKIGTVGTPCQIMGLRKMQSYPFATRF 121
Query: 227 NLEKL-YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP 285
+KL ++G C++N R+ L F++ + ++ + K + ++G
Sbjct: 122 VADKLALIIGIFCMENFPRDSLKTFIEGKMNSSLEGVNKMDIGKGKFWITDVEGE----- 176
Query: 286 YFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
LP + C C DY LAD+ G +G P
Sbjct: 177 -SGLPLKETHGYEQAGCNICLDYVAELADVSTGSVGSP 213
>gi|134045687|ref|YP_001097173.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis C5]
gi|132663312|gb|ABO34958.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanococcus
maripaludis C5]
Length = 282
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 26/245 (10%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++ + AR T ++ +Q GI++ I L+ G+++ V+ ++ +D P +
Sbjct: 4 FGTYKTAISARATDKAILKKSQDGGIISASYIYGLENGLLDGVIV--ANTEDGFKAVPKI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSVE------HH 225
A TPEEVL+A G K T+SPN+ L V ++++ G CQV+A+R + H
Sbjct: 62 ATTPEEVLSAAGTKYTVSPNIAVLKDAVREYALEKVGIVGTPCQVRAIRKLMKYPMGFRH 121
Query: 226 LNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 284
+ + V+G C++N EG+ ++ A VL + + K + G ++ V
Sbjct: 122 TDSKIALVMGIFCMENFPYEGMKAIVEQYAGIRMNDVLKTDIGKG-KFWVYSKSGDVKTV 180
Query: 285 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 344
P D SC+ C DYT LAD+ G +G P G S I VR +G
Sbjct: 181 PL-----KDTHMYEQKSCHVCMDYTAELADISTGSVGSPD--GWST------IFVRTAKG 227
Query: 345 KEMLS 349
+E L+
Sbjct: 228 EEYLN 232
>gi|330508186|ref|YP_004384614.1| coenzyme F420 hydrogenase subunit beta [Methanosaeta concilii GP6]
gi|328928994|gb|AEB68796.1| coenzyme F420 hydrogenase subunit beta [Methanosaeta concilii GP6]
Length = 288
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 116/235 (49%), Gaps = 22/235 (9%)
Query: 96 LETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAV 155
+E+ + GR R + LG++++ + A+ AQ G+ T + + L++GM++
Sbjct: 1 MESKLLGRTRNPEE----KLGIYKKAISAQAVSREGLAQDGGVATALLVFALESGMIDCA 56
Query: 156 VCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQ 215
+ D + R R V T +E+ AA G K T++ ++N+LA G +++ F G CQ
Sbjct: 57 IVTDKDDEWRTVSRVVT--TADEIRAAAGTKYTINNSVNSLAEALNMGFEKIGFVGTPCQ 114
Query: 216 VQALRSVE-----HHLNLEKLYVL-GTNCVDNGTREGLDKFLKAA--SSEPETVLHYEFM 267
+Q LR V+ + + EK+ +L G C++N + L L +P+ V +E
Sbjct: 115 IQGLRKVQLLEEPYQIGQEKIALLVGLFCMENFDYDLLMNGLVKGRFGLDPKNVARFEIK 174
Query: 268 QD-YKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMG 321
+ ++V K G ++EV L D + C CFD+ + LAD+ VG +G
Sbjct: 175 KGMFRVIDKQ--GKVDEVK---LEETDQYNF--KGCGPCFDFASELADISVGSVG 222
>gi|20089855|ref|NP_615930.1| coenzyme F420-reducing hydrogenase subunit beta [Methanosarcina
acetivorans C2A]
gi|19914804|gb|AAM04410.1| coenzyme F420 hydrogenase, subunit beta [Methanosarcina acetivorans
C2A]
Length = 291
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 111/223 (49%), Gaps = 15/223 (6%)
Query: 110 LDDTYLGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+ D YLG + + AR T + ++ AQ GI TT+ + L+ G+++ V+ V + D
Sbjct: 2 VSDPYLGKYTTCISARSTDREILKKAQDGGIATTLMVYALEEGIIDGVI-VAGEGDLPWK 60
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSVEHH- 225
PRP +A + +++L A+ K +SP ++ + + G+ ++ GV CQ+QA+R + +
Sbjct: 61 PRPFVAMSRKDILKAQKAKYNISPQISWIKEATRSFGLDKVGVTGVCCQIQAVRKAQLYP 120
Query: 226 LNLEKL-----YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGH 280
+N+ + +V+G C++N + + ++ +++ + + + K + G+
Sbjct: 121 INMRDVPGKIAFVVGLFCMENFLYDSIQAIVEDHTNQSLSSVKKMRIGKGKFQVYTERGN 180
Query: 281 IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
+ P L A P CY C DY + L D+ G +G P
Sbjct: 181 VATAP---LQATHKYG--QPGCYVCLDYVSNLGDISTGSVGSP 218
>gi|315427054|dbj|BAJ48671.1| coenzyme F420-dependent hydrogenase beta subunit [Candidatus
Caldiarchaeum subterraneum]
gi|343485722|dbj|BAJ51376.1| coenzyme F420-dependent hydrogenase beta subunit [Candidatus
Caldiarchaeum subterraneum]
Length = 399
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 127/313 (40%), Gaps = 54/313 (17%)
Query: 63 DHCSRCGLCDTYYIAHVKDAC--AFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEE 120
+HC C LC +AC L D + L++ H R+D G + E
Sbjct: 90 NHCIECDLC--------VEACPELHLSDMEIGFKSLDSYAH----REDGF-----GRYGE 132
Query: 121 LLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEE 178
+ +R T ++ +Q G VT++ I LK +++A + + L P P L P++
Sbjct: 133 VFLSRSTNSEILKRSQDGGTVTSLLIYALKENVIDAAALSTTTSEQPLKPIPKLVFEPDD 192
Query: 179 VLAAKGVKPTLSPNLNTLALVEA--AGVKRLLFCGVGCQVQALRSVEHH---------LN 227
VL G + T +PNL LAL EA GV +L GV CQ+ LR ++H
Sbjct: 193 VLGCAGSRYTYAPNL--LALKEAFEKGVDKLGVVGVPCQINGLRYLQHSVPEIRYAEWFK 250
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
++ +G C + T GL K+ P V + LK+ D ++
Sbjct: 251 QHVVFSIGLFCSEVFTYTGLMKYFNEIGVNPNDVAKINIKGKVIISLKNGDEIVK----- 305
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITV-RNERGKE 346
P L P+C C DY AD+ VG + H ITV R GK
Sbjct: 306 --PLKPLHKYERPACRFCKDYAADNADISVG----------GLATHGWTITVLRTRVGKT 353
Query: 347 ML--SLVKNLLEI 357
+ ++ K LEI
Sbjct: 354 LFEDAVSKGYLEI 366
>gi|297619117|ref|YP_003707222.1| coenzyme F420 hydrogenase subunit beta [Methanococcus voltae A3]
gi|297378094|gb|ADI36249.1| coenzyme F420 hydrogenase, subunit beta [Methanococcus voltae A3]
Length = 282
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 20/220 (9%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++ ++ AR T + ++ AQ GIV+ I L++ +++ V+ ++ +D + P +
Sbjct: 4 FGNYKTVISARATDKEILKKAQDGGIVSAAYIHGLESKLLDGVIV--ANTEDGFNAAPKI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSVE------HH 225
A TPEEVL A G K T+SPN++ L V ++++ G CQVQA+R + H
Sbjct: 62 ATTPEEVLNAAGTKYTVSPNISVLKDAVREYALEKVGIVGTPCQVQAIRKLMKYPMGFRH 121
Query: 226 LNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEE 283
+ + V+G C++N + EG+ ++ A VL + + + V+ K+ G ++
Sbjct: 122 TDSKIALVMGIFCMENFSYEGMKAIVEEYAGIRMNDVLKTDIGKGKFWVYSKY--GDVQS 179
Query: 284 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
V L + + SC+ C DYT LAD+ G +G P
Sbjct: 180 VK---LKDTHMYE--QKSCHICTDYTAELADISTGSVGSP 214
>gi|315428121|dbj|BAJ49707.1| coenzyme F420-dependent hydrogenase beta subunit [Candidatus
Caldiarchaeum subterraneum]
Length = 356
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 127/313 (40%), Gaps = 54/313 (17%)
Query: 63 DHCSRCGLCDTYYIAHVKDACA--FLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEE 120
+HC C LC +AC L D + L++ H R+D G + E
Sbjct: 47 NHCIECDLC--------VEACPELHLSDMEIGFKSLDSYAH----REDGF-----GRYGE 89
Query: 121 LLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEE 178
+ +R T ++ +Q G VT++ I LK +++A + + L P P L P++
Sbjct: 90 VFLSRSTNSEILKRSQDGGTVTSLLIYALKENVIDAAALSTTTSEQPLKPIPKLVFEPDD 149
Query: 179 VLAAKGVKPTLSPNLNTLALVEA--AGVKRLLFCGVGCQVQALRSVEHH---------LN 227
VL G + T +PNL LAL EA GV +L GV CQ+ LR ++H
Sbjct: 150 VLGCAGSRYTYAPNL--LALKEAFEKGVDKLGVVGVPCQINGLRYLQHSVPDIRYAEWFK 207
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
++ +G C + T GL K+ P V + LK+ D ++
Sbjct: 208 QHVVFSIGLFCSEVFTYTGLMKYFNEIGVNPNDVAKINIKGKVIISLKNGDEIVK----- 262
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITV-RNERGKE 346
P L P+C C DY AD+ VG + H ITV R GK
Sbjct: 263 --PLKPLHKYERPACRFCKDYAADNADISVG----------GLATHGWTITVLRTRVGKT 310
Query: 347 ML--SLVKNLLEI 357
+ ++ K LEI
Sbjct: 311 LFEDAVSKGYLEI 323
>gi|126180117|ref|YP_001048082.1| coenzyme F420-reducing hydrogenase subunit beta [Methanoculleus
marisnigri JR1]
gi|125862911|gb|ABN58100.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanoculleus
marisnigri JR1]
Length = 298
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 15/218 (6%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++ ++ AR T + +Q GI+TT+ L+ G+++ + V D+ P P++
Sbjct: 7 LGNYKSVISARSTDKDITKKSQDGGIITTLFAYALEEGIIDGAI-VAGPSDEPWKPEPMV 65
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSVEHH------ 225
T E+LAA G + T+SPNLN + + G+ R+ G CQ+QA+R + +
Sbjct: 66 VTTKAELLAAAGTRYTISPNLNLIKEATRSYGLDRVGIVGTPCQMQAVRKAQLYPIGMRD 125
Query: 226 LNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP 285
++ + LG C++N + + L+ ++ ++ E ++ + + E
Sbjct: 126 VDDKIALALGIFCMENLSYQALEAIVEDHCNQ-----KMESVKKMDIGKGKFTVYTERGA 180
Query: 286 YFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
+P + + P C C DY LAD+ G +G P
Sbjct: 181 VSQMPLKLIHKYVQPGCNVCLDYVANLADISSGSVGSP 218
>gi|88603574|ref|YP_503752.1| coenzyme F420-reducing hydrogenase subunit beta [Methanospirillum
hungatei JF-1]
gi|88189036|gb|ABD42033.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanospirillum
hungatei JF-1]
Length = 288
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 119/257 (46%), Gaps = 25/257 (9%)
Query: 114 YLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPV 171
YLG ++ + AR T + +Q GIVT++ + L+ G+++ + V + P+P+
Sbjct: 3 YLGKYKSAVAARSTSAEVLRCSQDGGIVTSMFLYALEEGIIDGAI-VAGQGEKPWQPKPI 61
Query: 172 LARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSVE-HHLNLE 229
+A TPEE+L+++G + + PN++ L V G+ ++ G CQ+QALR + + + L
Sbjct: 62 VATTPEEILSSRGTRYNVCPNMSVLKESVRKYGLDKVGIVGTPCQIQALRKAQLYPVGLR 121
Query: 230 KL-----YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 284
+ +G C++N + + + + ++ + L + K G + ++
Sbjct: 122 DVCDKIALAMGIFCMENFSYQSMTQIVQDHCNVDLHSLKKTDIGKGKYWAYTNRGAVSQI 181
Query: 285 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 344
P + P C+ C DY LAD+ G +G P G S + +RN G
Sbjct: 182 PLKLTHKYE-----QPGCHVCLDYVANLADISTGSVGSPD--GWST------VFIRNNNG 228
Query: 345 KEML--SLVKNLLEITP 359
+ + ++ + E P
Sbjct: 229 ENIWNKAVAAGIFETKP 245
>gi|73669779|ref|YP_305794.1| coenzyme F420-reducing hydrogenase subunit beta [Methanosarcina
barkeri str. Fusaro]
gi|2463277|emb|CAA74097.1| F420-reducing hydrogenase isoenzyme I beta subunit [Methanosarcina
barkeri]
gi|72396941|gb|AAZ71214.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanosarcina
barkeri str. Fusaro]
Length = 291
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 126/263 (47%), Gaps = 29/263 (11%)
Query: 110 LDDTYLGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
++D YLG + + AR T + ++ AQ GI T + + L+ G+++ + V D
Sbjct: 2 IEDPYLGKYVTCVSARSTDKEILKKAQDGGIATALMVYALEQGIIDGAI-VAGKGDLPWK 60
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSVE-HH 225
PRP +A + E++L A+ K +SP ++ L + G+ ++ GV CQ+QA+R + +
Sbjct: 61 PRPFVAMSREDILKAQRAKYNISPQISWLKEATRSFGLDKVGITGVCCQMQAVRKAQLYP 120
Query: 226 LNLEKL-----YVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLD 278
+N+ + + +G C+ N + + ++ A+ +V EF + + VH +
Sbjct: 121 INMRDVPGKVAFAVGLFCMVNFPYDSIQALVEDHANQSLSSVKKMEFGKGKFFVHTER-- 178
Query: 279 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 338
G++ VP + P C+ C DY + LAD+ G +G P G S +
Sbjct: 179 GNVATVPL-----KETHKYEQPGCHVCLDYVSNLADISTGSVGSP--GGWST------VF 225
Query: 339 VRNERGKEMLS--LVKNLLEITP 359
+R + G E+ S + + L E P
Sbjct: 226 IRTKVGNEIWSKAVAEGLFETKP 248
>gi|397780547|ref|YP_006545020.1| coenzyme F420 hydrogenase beta subunit [Methanoculleus bourgensis
MS2]
gi|396939049|emb|CCJ36304.1| coenzyme F420 hydrogenase beta subunit [Methanoculleus bourgensis
MS2]
Length = 295
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 15/218 (6%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++ ++ AR T ++ AQ GI+TT+ L+ G+++ + V D+ P P++
Sbjct: 4 LGNYKSVISARSTDRDILKKAQDGGIITTLFAYALEEGIIDGAI-VAGPGDEPWKPEPMV 62
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSVE------HH 225
T E+LAA G + T+SPNL+ + + G+ R+ G CQ+QA+R +
Sbjct: 63 VTTKAELLAAAGTRYTISPNLSLIKEATRSYGLDRVGIVGTPCQIQAVRKAQVYPIGMRD 122
Query: 226 LNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP 285
++ + LG C++N + + L+ ++ ++ E + + + E
Sbjct: 123 VDDKIALALGIFCMENLSYQALEAMVEDHCNQ-----KMESVTKMDIGKGKFTVYTERGA 177
Query: 286 YFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
+P + + P C C DY LAD+ G +G P
Sbjct: 178 VAQMPLKLIHKYVQPGCNVCLDYVANLADISSGSVGSP 215
>gi|52550138|gb|AAU83987.1| coenzyme F420-dependent oxidoreductase [uncultured archaeon
GZfos35B7]
Length = 360
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 122/265 (46%), Gaps = 29/265 (10%)
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
++ + LGV+ + K Q G VT + L+ G+++ +D D+ P
Sbjct: 96 TVQEDVLGVYRNCYAVKSKKGDITGQDGGTVTALLAYALEEGVLDCAAITAAD--DQWRP 153
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE----- 223
+ +A +++ A G K TL P++ + G + F G+ CQ+Q LR V+
Sbjct: 154 KAKVATNYDDLKAGAGTKYTLYPSVIGVRDAIEEGHTAIGFVGLPCQIQGLRKVQMSEQP 213
Query: 224 HHLNLEKLYVL-GTNCVDNGTREGLDKFLKAASSEPETVLHYEFM-QDYKVHLKHLDGHI 281
+ + ++KL +L G C++N E LD F+ ++ E V + +D+ V+ K
Sbjct: 214 YDVGIDKLKLLIGLFCMENFREELLD-FIAEKYTKLENVSKCDIKGKDFSVYAKEKHS-- 270
Query: 282 EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRN 341
+P D+ D + C C D+T LAD+ VG +G + G S + VR+
Sbjct: 271 -------IPLVDIKDYVGDGCSICMDFTAELADISVGSVGSEE--GWST------VFVRS 315
Query: 342 ERGKEML--SLVKNLLEITPTISSG 364
E+G+E++ +L K +E+ G
Sbjct: 316 EKGEELVKGALAKGYIEVKEIEDKG 340
>gi|1706904|sp|Q00391.1|FRHB_METVO RecName: Full=Coenzyme F420 hydrogenase subunit beta; AltName:
Full=8-hydroxy-5-deazaflavin-reducing hydrogenase
subunit beta; Short=FRH
gi|809731|emb|CAA43499.1| F420-reducing hydrogenase subunit [Methanococcus voltae PS]
Length = 280
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 45/254 (17%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++ + AR T ++ AQ G V+ I L++ +++ V V +D +D + P +
Sbjct: 3 FGNYKTAISARATDKEILKKAQDGGYVSAAHIYGLESKLLDGV-SVAADTEDGCNAAPKV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSVEHH----LN 227
A TPEEVL A G K T+SPN++ L V ++++ G CQVQA+R + + +
Sbjct: 62 ATTPEEVLNAAGAKYTVSPNVSVLKDAVREYALEKVGIVGTPCQVQAIRKLIKYPMGFRH 121
Query: 228 LEKLYVLGTNCVDNGTREG------------LDKFLKAASSEPETVLHYEFMQDYKVHLK 275
+ V+G C++N + EG +D LK + + ++ ++ V LK
Sbjct: 122 TDSRIVMGIFCMENFSYEGMKAIVEEYAGIRMDDVLKTDIGKGKFWVYSKYGDVKSVKLK 181
Query: 276 HLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQ 335
D H+ E SC+ C DYT LAD+ G +G P G S
Sbjct: 182 --DTHMYE---------------QKSCHICTDYTAELADISTGSVGSP--DGWST----- 217
Query: 336 YITVRNERGKEMLS 349
I +R E+G+ ++
Sbjct: 218 -IFIRTEKGEAYIN 230
>gi|150398835|ref|YP_001322602.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
vannielii SB]
gi|150011538|gb|ABR53990.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanococcus vannielii SB]
Length = 282
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 18/219 (8%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G + + + AR T ++ +Q GI++ I L++G+++ V+ ++ + P+ +
Sbjct: 4 FGTYNKAISARATDKAILKKSQDGGIISASYIYGLESGLLDGVIVANTEKGFKAVPK--I 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSV------EHH 225
TPEEVL A G K T+SPN++ L V ++++ G CQVQA+R + H
Sbjct: 62 VTTPEEVLNAAGTKYTISPNVSVLKDAVREYALEKVGIVGTPCQVQAIRKLIKYPMGFRH 121
Query: 226 LNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 284
+ + +LG C++N EG+ ++ A VL + + K + G ++ V
Sbjct: 122 TDSKIALILGIFCMENFPYEGMKAIVEQYAGIRMNDVLKTDIGKG-KFWVYSKSGEVKTV 180
Query: 285 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
L + + SC+ C DYT LAD+ G +G P
Sbjct: 181 ---ALKDTHMYE--QKSCHVCMDYTAELADISTGSVGSP 214
>gi|219850772|ref|YP_002465204.1| coenzyme F420-reducing hydrogenase subunit beta [Methanosphaerula
palustris E1-9c]
gi|219545031|gb|ACL15481.1| coenzyme F420 hydrogenase, subunit beta [Methanosphaerula palustris
E1-9c]
Length = 291
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Query: 110 LDDTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+ D +LG + ++ AR T ++GAQ GIVT + L+ G+++ + V D+
Sbjct: 2 VSDNFLGNYASVVAARSTDKSILKGAQDGGIVTQLFAYALEEGIIDGAI-VAGPGDEPWK 60
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSVE-HH 225
P PV+A T EE+LAA+G K +SPN+ + + G+ ++ G CQ+QALR + +
Sbjct: 61 PVPVVATTVEELLAARGTKYNISPNMQLIKEATRSYGLDKVGIVGTPCQIQALRKGQLYP 120
Query: 226 LNLEKL-----YVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQDYKVHLKHLDG 279
+ L + +G C++N + + + ++ A+++ E V + + K + G
Sbjct: 121 VGLRDVPDKIALAVGIFCMENFPYQSIVQLVEDHANTKLENVTKMDIGKG-KFWVYTGRG 179
Query: 280 HIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
++P + C+ C DY + LAD+ G +G P
Sbjct: 180 ASVQLPLKITHKYE-----QAGCHVCLDYVSNLADVSTGSVGTP 218
>gi|307352754|ref|YP_003893805.1| coenzyme F420 hydrogenase subunit beta [Methanoplanus petrolearius
DSM 11571]
gi|307155987|gb|ADN35367.1| coenzyme F420 hydrogenase, subunit beta [Methanoplanus petrolearius
DSM 11571]
Length = 287
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 115/230 (50%), Gaps = 25/230 (10%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
+Q GIVT + L+ G+++ + V + D+ P PV+A T E+LAA+G K T+SPN
Sbjct: 23 SQDGGIVTQLFTYALEEGIIDGAI-VAAPGDEPWKPEPVVATTKAELLAARGTKYTISPN 81
Query: 193 LNTLA-LVEAAGVKRLLFCGVGCQVQALRSVE-HHLNLEKL-----YVLGTNCVDNGTRE 245
+ + + G+ ++ G CQ+QALR + + + + K+ +G C++N
Sbjct: 82 MMLIKEATRSYGLDKVGIVGTPCQMQALRKAQLYPMAMRKVPDKIALAIGIFCMENFPYM 141
Query: 246 GLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCY 303
GL+ ++ ++ E+ + + + + V+ + G + ++P L A + P C+
Sbjct: 142 GLETIVEDHCQTKMESAVKMDIGKGKFSVYTER--GALSQIP---LAATHKYE--QPGCH 194
Query: 304 SCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKN 353
C DY LAD+ G +G P G S + VR ++G+++ S N
Sbjct: 195 VCLDYVANLADVSTGSVGSPD--GWST------VFVRTKKGEDVWSKAVN 236
>gi|84490093|ref|YP_448325.1| coenzyme F420-reducing hydrogenase subunit beta [Methanosphaera
stadtmanae DSM 3091]
gi|84373412|gb|ABC57682.1| FrhB [Methanosphaera stadtmanae DSM 3091]
Length = 298
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 118/265 (44%), Gaps = 32/265 (12%)
Query: 110 LDDTYLGVHEELLYAR--KTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
+ D+ LG H+E++ A+ K + AQ GIV+ I I L+ +++ + V D+
Sbjct: 2 IQDSVLGPHQEIITAKAADNKVLSKAQDGGIVSAILIYALEENIIDGTI-VAGPGDEPWK 60
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSVEHH- 225
P P++A T +E+L G K T+ PNL+ + G++++ G CQV LR ++ +
Sbjct: 61 PEPLVATTKKEILKGAGTKYTMCPNLSVIKEATREYGLEKIGTVGTPCQVMGLRKMQTYP 120
Query: 226 LNLEKL-----YVLGTNCVDNGTREGLDKFLK-AASSEPETVLHYEFMQDYKVHLKHLDG 279
L + + +G C++N E L F+ P V + K+ + H G
Sbjct: 121 LGVRNVVDKIALSIGIYCMENFPYESLKTFINDKVGVTPSQVTKMNITKG-KLFITHTGG 179
Query: 280 HIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITV 339
+ +P + C C DY L+DL G +G P + T+
Sbjct: 180 EGK------IPLKETHGYEQAGCNYCMDYVAELSDLSCGSVGA----------KPGWSTI 223
Query: 340 --RNERGKEML--SLVKNLLEITPT 360
R ++G ++ ++ + +LE T T
Sbjct: 224 IKRTDKGASLIDKAIKEGVLETTET 248
>gi|374628811|ref|ZP_09701196.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanoplanus
limicola DSM 2279]
gi|373906924|gb|EHQ35028.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanoplanus
limicola DSM 2279]
Length = 287
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++ ++ AR ++ +Q GIVT + L+ G+++ + V D+ P PV+
Sbjct: 3 LGNYKSVISARAADAEILKRSQDGGIVTQLFAYALEEGIIDGAI-VAGPGDEPWKPEPVV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSVE-HHLNLEK 230
A T E+LAA+G + T+SPN+ + + G+ ++ G CQ+QALR + + + + K
Sbjct: 62 ATTRAELLAARGTRYTISPNMMLIKEATRSYGLDKVGIVGTPCQMQALRKAQLYPMAMRK 121
Query: 231 L-----YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP 285
+ +G C++N +GL+ + E + E + + E
Sbjct: 122 VPDKIALAIGIFCMENFPYQGLEAIV-----EDHCNVKMESADKMDIGKGKFSVYTERGA 176
Query: 286 YFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
+P P C+ C DY LAD+ G +G P
Sbjct: 177 ISQIPLKATHKYEQPGCHVCLDYVANLADVSTGSVGSP 214
>gi|340624695|ref|YP_004743148.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis X1]
gi|339904963|gb|AEK20405.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis X1]
Length = 282
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 26/226 (11%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
AQ GIV+ I L++G+++ V+ +D +D + P +A T EE+L A G K T+ PN
Sbjct: 24 AQDGGIVSAAYIYGLESGLLDGVII--ADKEDGFAAAPKVATTREEILNAAGTKYTVCPN 81
Query: 193 LNTL-ALVEAAGVKRLLFCGVGCQVQALRSV------EHHLNLEKLYVLGTNCVDNGTRE 245
L+ + + V G +L F G CQV+++R H+ + ++G C++N
Sbjct: 82 LSVVKSAVREYGCDKLGFVGTPCQVRSIRKAIKYPIGYRHVPDKIALIMGIFCMENFPYN 141
Query: 246 GLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCY 303
G+ ++ + + V+ + + + V+ K D +P D SC+
Sbjct: 142 GMKAIVEEHCGIKMDDVVKTDIGKGKFWVYSKWGD-------VKTIPLKDTHPYEQGSCH 194
Query: 304 SCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 349
C DYT LAD+ G +G P G S I VR +G+E L+
Sbjct: 195 VCMDYTAELADISTGSVGSP--DGWST------IFVRTAKGEEYLN 232
>gi|45358948|ref|NP_988505.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis S2]
gi|45047814|emb|CAF30941.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis S2]
Length = 282
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 26/226 (11%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
AQ GIV+ I L++G+++ V+ +D +D + P +A T EE+L A G K T+ PN
Sbjct: 24 AQDGGIVSAAYIYGLESGLLDGVII--ADKEDGFAAAPKVATTREEILNAAGTKYTVCPN 81
Query: 193 LNTL-ALVEAAGVKRLLFCGVGCQVQALRSV------EHHLNLEKLYVLGTNCVDNGTRE 245
L+ + + V G +L F G CQV+++R H+ + ++G C++N
Sbjct: 82 LSVVKSAVREYGCDKLGFVGTPCQVRSIRKAIKYPVGYRHVPDKIALIMGIFCMENFPYN 141
Query: 246 GLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCY 303
G+ ++ + + V+ + + + V+ K D +P D SC+
Sbjct: 142 GMKAIVEEHCGIKMDDVVKTDIGKGKFWVYSKWGD-------VKTIPLKDTHPYEQGSCH 194
Query: 304 SCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 349
C DYT LAD+ G +G P G S I VR +G+E L+
Sbjct: 195 VCMDYTAELADISTGSVGSP--DGWST------IFVRTAKGEEYLN 232
>gi|224102271|ref|XP_002312617.1| predicted protein [Populus trichocarpa]
gi|222852437|gb|EEE89984.1| predicted protein [Populus trichocarpa]
Length = 79
Score = 70.9 bits (172), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/40 (72%), Positives = 35/40 (87%)
Query: 264 YEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCY 303
++ ++ + VHLKHLDGHIEEVPYFCLPAN+L DVIAPS Y
Sbjct: 39 WKLLEFFVVHLKHLDGHIEEVPYFCLPANELADVIAPSWY 78
>gi|296109197|ref|YP_003616146.1| coenzyme F420 hydrogenase, subunit beta [methanocaldococcus
infernus ME]
gi|295434011|gb|ADG13182.1| coenzyme F420 hydrogenase, subunit beta [Methanocaldococcus
infernus ME]
Length = 282
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 108/236 (45%), Gaps = 48/236 (20%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
AQ GIV+T+ I L+ +++ VV +D +D P+P +A TPEEV+ A G K ++ PN
Sbjct: 24 AQDGGIVSTLFIYALENNILDGVVV--ADKEDEFLPKPKVATTPEEVIEAAGTKYSVCPN 81
Query: 193 LNTL-ALVEAAGVKRLLFCGVGCQVQALRSVEHH------LNLEKLYVLGTNCVDNGTRE 245
+ + G +++ G CQ++A+R + +N+E +++G C++N
Sbjct: 82 IAEIKKAAREYGCEKIGVVGTPCQIRAVRKAMKYPVGFRGVNIE--FLIGIFCMENFPYN 139
Query: 246 GL------------DKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 293
GL + +K + + ++ + + V LK E PY
Sbjct: 140 GLRVIVEELCGVKMEDVVKLDIGKGKFWVYTRWGETKTVKLK------ETHPYE------ 187
Query: 294 LVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 349
SC+ C DYT LAD+ G +G P G S + +R +GKE+ S
Sbjct: 188 -----QSSCHVCTDYTAELADVSTGSVGSP--DGWST------VFIRTVKGKEIFS 230
>gi|357037825|ref|ZP_09099624.1| Coenzyme F420 hydrogenase [Desulfotomaculum gibsoniae DSM 7213]
gi|355360381|gb|EHG08139.1| Coenzyme F420 hydrogenase [Desulfotomaculum gibsoniae DSM 7213]
Length = 366
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 116/273 (42%), Gaps = 36/273 (13%)
Query: 96 LETVVHGRGRRKDSLDDTYLGVHEELLYARKT-KPVEGAQWTGIVTTIAIEMLKTGMVEA 154
++ V GR R +D LGV + + +AR GAQ+ G+ T +A L+ G++
Sbjct: 64 MDRAVFGRER-----EDQALGVLQGIYFARAAGDKAPGAQYGGVTTALAALALRQGLISG 118
Query: 155 VVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGC 214
V + D+ P P LART EV A G K P L L G+ L G C
Sbjct: 119 AVLTGGEADN---PHPALARTAGEVYACAGSKYVGVPTLAELNRALRDGLTGLGVVGRPC 175
Query: 215 QVQALRSVEH------HLNLEKL--YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEF 266
QV A+R ++ N+ VLG C + T + FL + + E V+ +
Sbjct: 176 QVAAVRKMQQGNLPGAQFNVPGAVELVLGLFCFASLTPD-FYSFL-SGQVQGEKVIKMDI 233
Query: 267 MQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYT 326
+D V + + +DL I +C C D T+ AD+ VG
Sbjct: 234 PEDGPVVETSAGSYRWSM-------DDLRPYIHKACNLCLDPTSEWADIAVG-------- 278
Query: 327 GISMTQHPQYITVRNERGKEMLSLV--KNLLEI 357
+ + VR++RG+++L+L K ++EI
Sbjct: 279 ATEYDRAWNTLVVRSDRGRDLLNLALDKGVIEI 311
>gi|159905671|ref|YP_001549333.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis C6]
gi|159887164|gb|ABX02101.1| coenzyme F420 hydrogenase, subunit beta [Methanococcus maripaludis
C6]
Length = 282
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 26/226 (11%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
AQ GIV+ I L++G+++ V+ +D +D + P +A T EE+L A G K T+ N
Sbjct: 24 AQDGGIVSAAYIYGLESGLLDGVII--ADKEDGFAAAPKVATTREEILNAAGTKYTVCSN 81
Query: 193 LNTL-ALVEAAGVKRLLFCGVGCQVQALRSV------EHHLNLEKLYVLGTNCVDNGTRE 245
L+ + + V G +++ F G CQVQ++R H+ + ++G C++N
Sbjct: 82 LSVIKSAVREYGCEKVGFVGTPCQVQSIRKAIKYPVGYRHVPDKIALIMGIFCMENFPYN 141
Query: 246 GLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCY 303
G+ ++ + + V+ + + + V+ K D +P D SC+
Sbjct: 142 GMKAIVEEHCGIKMDDVVKTDIGKGKFWVYSKWGDVK-------TIPLKDTHPYEQISCH 194
Query: 304 SCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 349
C DYT LAD+ G +G P G S I VR +G+E L+
Sbjct: 195 VCMDYTAELADISTGSVGSP--DGWST------IFVRTAKGEEYLN 232
>gi|73667804|ref|YP_303819.1| F420H2 dehydrogenase subunit F [Methanosarcina barkeri str. Fusaro]
gi|72394966|gb|AAZ69239.1| F420H2 dehydrogenase subunit F [Methanosarcina barkeri str. Fusaro]
Length = 346
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 21/239 (8%)
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLA 181
+A ++K G+Q G+ + I + K G ++ V + D ++ + VL + E+V
Sbjct: 82 FFAARSKENAGSQDGGVTSGILKSLFKQGKIDCAVGITRD--EKWESKVVLLTSAEDVEK 139
Query: 182 AKGVKPTLSPNLNTLALVEA-AGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVD 240
+G K T P + AL EA R+ GV CQ + R + +++ + + ++G C++
Sbjct: 140 VRGTKYTSDPVV--AALREAFEKYDRIAVVGVPCQAHSARLIRENVSEKIVLIIGLLCME 197
Query: 241 NGTRE-GLDKFL-KAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVI 298
+ + LDK + + + E V EF + K + DG + VP D+
Sbjct: 198 SFHHDVMLDKIIPEIMKVKIEDVRKMEFTKG-KFWVYTSDGEVHSVPI-----KDVAKYA 251
Query: 299 APSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEI 357
C+ C DYT+ AD+ VG +G P + +R + G+E +V+ +EI
Sbjct: 252 RNPCHHCCDYTSVFADISVGSVGAP--------DGWNSVFIRTDAGEEYFEMVREEMEI 302
>gi|134045238|ref|YP_001096724.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis C5]
gi|132662863|gb|ABO34509.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanococcus
maripaludis C5]
Length = 282
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 109/226 (48%), Gaps = 26/226 (11%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
AQ GIV+ I L++G+++ V+ +D +D + P +A T EE+L+A G K T+ N
Sbjct: 24 AQDGGIVSAAYIYGLESGLLDGVII--ADKEDGFAAVPKVATTREEILSAAGTKYTVCSN 81
Query: 193 LNTL-ALVEAAGVKRLLFCGVGCQVQALRSV------EHHLNLEKLYVLGTNCVDNGTRE 245
L+ + + V G +L F G CQV+++R H+ + ++G C++N
Sbjct: 82 LSVVKSAVREYGCDKLGFVGTPCQVRSIRKAIKYPVGYRHVPDKIALIMGIFCMENFPYN 141
Query: 246 GLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCY 303
G+ ++ + + V+ + + + V+ K G ++ VP D SC+
Sbjct: 142 GMKAIVEEHCGIKMDDVVKTDIGKGKFWVYSKW--GDVKTVPL-----KDTHPYEQGSCH 194
Query: 304 SCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 349
C DYT LAD+ G +G P G S I VR +G+E L+
Sbjct: 195 VCMDYTAELADISTGSVGSP--DGWST------IFVRTAKGEEYLN 232
>gi|150399446|ref|YP_001323213.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
vannielii SB]
gi|150012149|gb|ABR54601.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanococcus vannielii SB]
Length = 282
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
+Q GI++ I L+ G+++ V+ +D +D+ + P +A T +EVL+A G K T PN
Sbjct: 24 SQDGGIISAAYIYGLENGLLDGVIV--ADKEDKFTAVPKVATTKDEVLSAAGTKYTTCPN 81
Query: 193 LNTL-ALVEAAGVKRLLFCGVGCQVQALRSV------EHHLNLEKLYVLGTNCVDNGTRE 245
L+ + + V G ++ F G CQ+Q++R H+ + ++G C++N
Sbjct: 82 LSVIKSAVREYGCDKIGFVGTPCQIQSIRKAIKYPIGYRHVPDKIALIMGIFCMENFPYN 141
Query: 246 GLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCY 303
G+ ++ E V+ + + + V+ K G ++ V D SC+
Sbjct: 142 GMKTIVEELCGVRMEDVVKTDIGKGKFWVYTKW--GDVKTVAL-----KDTHPYEQVSCH 194
Query: 304 SCFDYTNALADLVVGYMGVP 323
C DYT LADL G +G P
Sbjct: 195 ICMDYTAELADLSTGSVGSP 214
>gi|150402554|ref|YP_001329848.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
maripaludis C7]
gi|150033584|gb|ABR65697.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanococcus maripaludis C7]
Length = 282
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 110/226 (48%), Gaps = 26/226 (11%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
AQ GIV+ I L++G+++ V+ +D +D + P +A T EE+L+A G K T+ N
Sbjct: 24 AQDGGIVSAAYIYGLESGLLDGVII--ADKEDGFAAAPKVATTREEILSAAGTKYTVCSN 81
Query: 193 LNTL-ALVEAAGVKRLLFCGVGCQVQALRSV------EHHLNLEKLYVLGTNCVDNGTRE 245
L+ + + V G +++ F G CQV+++R H+ + ++G C++N
Sbjct: 82 LSVVKSAVREYGCEKVGFVGTPCQVRSIRKAIKYPVGYRHVPDKIALIMGIFCMENFPYN 141
Query: 246 GLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCY 303
G+ ++ + + V+ + + + V+ K G ++ VP D SC+
Sbjct: 142 GMKAIVEEHCGIKMDDVVKTDIGKGKFWVYSKW--GDVKTVPL-----KDTHPYEQMSCH 194
Query: 304 SCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 349
C DYT LAD+ G +G P G S I VR +G+E L+
Sbjct: 195 VCMDYTAELADISTGSVGSP--DGWST------IFVRTAKGEEYLN 232
>gi|262192428|ref|ZP_06050580.1| coenzyme F420-dependent oxidoreductase [Vibrio cholerae CT 5369-93]
gi|262031692|gb|EEY50278.1| coenzyme F420-dependent oxidoreductase [Vibrio cholerae CT 5369-93]
Length = 403
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 91/186 (48%), Gaps = 6/186 (3%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPT-LSPNLNT 195
GI++ AI +L+ G+V+ V+ +++ + L +++T +EVL+A G + + SP +N
Sbjct: 100 GILSQTAIYLLEQGLVDGVIHIKASDEKPLLNVATISKTADEVLSAAGSRYSPASPLINL 159
Query: 196 LALVEAAGVKRLLFCGVGCQVQALR---SVEHHLNLEKLYVLGTNCVDNGTREGLDKFLK 252
+ +V+ ++ F G C V ALR SVE + Y+L C +REG++ L
Sbjct: 160 VQIVKGNPDQKFCFIGKPCDVTALRNLISVEPSIGKSIPYLLSFFCAGTPSREGVEAVLD 219
Query: 253 AASSEPETVLHYEFMQDY--KVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTN 310
+ +P+ ++ ++F + + I+E+ Y N L I C C D
Sbjct: 220 RLNVKPQDIIKFDFRGNGWPGKTVATTRSSIKEMSYNDSWGNILGPTIQHRCKICADGIG 279
Query: 311 ALADLV 316
ADLV
Sbjct: 280 ENADLV 285
>gi|268323745|emb|CBH37333.1| conserved hypothetical protein, coenzyme F420-reducing hydrogenase
beta subunit related [uncultured archaeon]
Length = 360
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 111/246 (45%), Gaps = 25/246 (10%)
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
++ + LGV+ + K Q G VT + L+ G+++ +D D+ P
Sbjct: 96 TVQEDILGVYRNCYAVKSKKGDITGQDGGTVTALLAYALEEGVLDCAAITAAD--DQWRP 153
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE----- 223
+ +A ++ A G K TL P++ + G + F G+ CQ+Q LR V+
Sbjct: 154 KTKVATNNADLKAGAGTKYTLYPSVIGVRDAIEEGHTAIGFVGLPCQIQGLRKVQMSEQP 213
Query: 224 HHLNLEKLYVL-GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIE 282
+ + ++KL +L G C++N E LD ++ ++ E V K +K + +
Sbjct: 214 YDVGIDKLKLLIGLFCMENFREELLD-YIAEKYTQLENV--------SKCDIKGKEFSVY 264
Query: 283 EVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNE 342
+P D+ D + C C D+T LAD+ VG +G + G S + VR+E
Sbjct: 265 ANEKHSIPLEDIKDYVGDGCSICMDFTAELADISVGSVGSEE--GWST------VFVRSE 316
Query: 343 RGKEML 348
G+E++
Sbjct: 317 SGEELV 322
>gi|21226729|ref|NP_632651.1| F420H2 dehydrogenase subunit F [Methanosarcina mazei Go1]
gi|452209214|ref|YP_007489328.1| Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoF
[Methanosarcina mazei Tuc01]
gi|20905018|gb|AAM30323.1| F420H2 dehydrogenase subunit FpoF [Methanosarcina mazei Go1]
gi|452099116|gb|AGF96056.1| Coenzyme F(420)H(2) dehydrogenase (methanophenazine) subunit FpoF
[Methanosarcina mazei Tuc01]
Length = 346
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 28/250 (11%)
Query: 117 VHEELLYARK-----TKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPV 171
+ ELL RK +K G+Q G+ + I + G ++ V + + + P V
Sbjct: 72 IENELLNVRKFFGAKSKDNAGSQDGGVTSGILKALFNKGEIDCAVGITRN--ENWEPEVV 129
Query: 172 LARTPEEVLAAKGVKPTLSPNLNTLALVEA-AGVKRLLFCGVGCQVQALRSVEHHLNLEK 230
L + E+V +G K T P + AL EA R+ GV CQ A R + ++N +
Sbjct: 130 LLTSAEDVERTRGTKYTSDPVV--AALREAFEKYDRIAVVGVPCQAHAARLIRENVNEKI 187
Query: 231 LYVLGTNCVDNGTRE-GLDKFL-KAASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYF 287
+ ++G C+++ + LDK + + ++ EF + + V+ K DG + VP
Sbjct: 188 VLIIGLLCMESFHHDVMLDKIIPEIMKVNVRDIVKMEFTKGKFWVYTK--DGEVHSVPI- 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
D+ C+ C DYT+ AD+ VG +G P + +R E G++
Sbjct: 245 ----KDIAKYARNPCHHCCDYTSVFADISVGSVGAP--------DGWNSVFIRTEIGEKY 292
Query: 348 LSLVKNLLEI 357
+V++ +EI
Sbjct: 293 FDMVRDEMEI 302
>gi|297619513|ref|YP_003707618.1| coenzyme F420 hydrogenase subunit beta [Methanococcus voltae A3]
gi|297378490|gb|ADI36645.1| coenzyme F420 hydrogenase, subunit beta [Methanococcus voltae A3]
Length = 282
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
+Q GIV+ I L++G+++ V+ +D + P +A T +EVL+A G K T SPN
Sbjct: 24 SQDGGIVSAAYIHGLESGLLDGVIV--ADKGEDFCAVPKVATTVDEVLSAAGTKYTTSPN 81
Query: 193 LNTLA-LVEAAGVKRLLFCGVGCQVQALRSV------EHHLNLEKLYVLGTNCVDNGTRE 245
L+ L V G ++ F G CQVQ++R + H+ + V+G C++N
Sbjct: 82 LSVLKNAVREYGCDKVGFVGTPCQVQSIRKMLKYPVGYRHVPDKIALVMGIFCMENFPYN 141
Query: 246 GLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCY 303
GL ++ + E V + + + V+ K D + D SC+
Sbjct: 142 GLKTIVEEHCGIKMEDVAKTDIGKGKFWVYSKWGD-------VKTIKLKDTHPYEQQSCH 194
Query: 304 SCFDYTNALADLVVGYMGVP 323
C DYT LAD+ G +G P
Sbjct: 195 VCMDYTAELADISTGSVGSP 214
>gi|126178281|ref|YP_001046246.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
[Methanoculleus marisnigri JR1]
gi|125861075|gb|ABN56264.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanoculleus marisnigri JR1]
Length = 339
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 106/243 (43%), Gaps = 29/243 (11%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
LG +E+++ AR PVE Q G VT I + L G+++AVV V DP + P +
Sbjct: 78 LGPYEDIVAARAVFPVERKQSGGAVTAILVNALDEGLIDAVVTVTRDPWT-MKPSSAVIT 136
Query: 175 TPEEVLAAKGVKPT-LSPNLNTL-ALVEAAGVKRLLFCGVGC---QVQALRSVEHHL--- 226
+ EE++ G + + P L +L V +R+ GV C QA+R+ +H L
Sbjct: 137 SSEELVQHAGSRYSWWVPLLASLKEAVVTRKYRRVAVVGVPCVARATQAIRASDHELLRP 196
Query: 227 -NLEKLYVLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEE 283
V+G C + L K EP + H + LD ++++
Sbjct: 197 YAKAIRLVIGLFCTETFDYAKLVEGKLQSEKKIEPWEIRHLDIK-------GKLDVYLQD 249
Query: 284 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK-YTGISMTQHPQYITVRNE 342
+ +P +L + + P C C D+T AD+ G +G P YT + +RN+
Sbjct: 250 ERHISIPLAELEESVRPGCRVCNDFTAVNADVSAGAVGSPDGYT---------TLVIRND 300
Query: 343 RGK 345
G+
Sbjct: 301 IGR 303
>gi|20093305|ref|NP_619380.1| coenzyme F420-dependent oxidoreductase [Methanosarcina acetivorans
C2A]
gi|19918663|gb|AAM07860.1| coenzyme F420-dependent oxidoreductase [Methanosarcina acetivorans
C2A]
Length = 387
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 15/227 (6%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDR 165
R + ++ +G A+ P Q G+VT++ + L G+++ V ++
Sbjct: 110 RTITTEEGLIGSFRYAYAAKSAIPEMKGQDGGVVTSLLLYALDEGLIDCAVVTTRSKEEP 169
Query: 166 LSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE-- 223
P P +A+T EE+L + G + S L L G+ + F G C + A+ ++
Sbjct: 170 WKPIPKVAKTREEILESGGSIYSHSMTLEALMSAIKQGMHSIAFVGTSCNIDAVTKMQKS 229
Query: 224 -----HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQ-DYKVHLKHL 277
H K+ LG C+D T EG+ L++ E V + + +++ LK
Sbjct: 230 SYGLLHLFMRAKILKLGLFCMDTFTYEGIKAVLESYGIALENVEAMKIRKGKFEITLKDG 289
Query: 278 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK 324
H+ E+ +D + + SC C D + AD+ G +G P+
Sbjct: 290 KEHVLEL-------SDFDEYRSSSCQFCTDLASENADISFGGVGSPE 329
>gi|219853262|ref|YP_002467694.1| coenzyme F420 hydrogenase [Methanosphaerula palustris E1-9c]
gi|219547521|gb|ACL17971.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanosphaerula palustris E1-9c]
Length = 341
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 27/216 (12%)
Query: 124 ARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAK 183
AR +EG Q G VT I + L+ G+++AVV V +D L P + + E ++
Sbjct: 88 ARAAFEIEGRQSGGAVTAILVNALEEGLIDAVVTVTADQWTML-PHSTVITSSEALITGA 146
Query: 184 GVKPTLSPNLNTLALVEAAGV----KRLLFCGVGCQVQA---LRSVEHHLNLEKLY---- 232
G + L LA ++ A V KR+ GV C VQA +RS EH +L + Y
Sbjct: 147 GSRYNWWVPL--LAALKEAVVTRKYKRIAIVGVPCVVQAVEQMRSSEH--DLLRPYARAI 202
Query: 233 --VLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFC 288
++G C ++ + L K + S EP + + +V LK DG+
Sbjct: 203 RLLIGLFCTESFDYQRLMEGKLVHEFSIEPWQIRKMDVKGVLEVLLK--DGN-----AIT 255
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK 324
+P DL D + P C++C D T ADL G +G P+
Sbjct: 256 IPLKDLADCVRPGCHTCNDLTGVDADLSAGSVGSPE 291
>gi|261403396|ref|YP_003247620.1| coenzyme F420-reducing hydrogenase subunit beta [Methanocaldococcus
vulcanius M7]
gi|261370389|gb|ACX73138.1| coenzyme F420 hydrogenase, subunit beta [Methanocaldococcus
vulcanius M7]
Length = 282
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 129/258 (50%), Gaps = 30/258 (11%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G +++++ AR T + ++ AQ GIV+T I L+ +++ V+ + + R P+ +
Sbjct: 4 FGTYKKVVSARSTLKEVLKKAQDGGIVSTAFIYGLENNLLDGVIVADNAGEFRAIPK--V 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVE------HH 225
A TPEEVL A G K T+ PN++ L + V G +++ G CQV+A+R + H
Sbjct: 62 ATTPEEVLEAAGTKYTVCPNVSVLKSAVREYGCEKIGVVGTPCQVRAVRKLMKYPIGFRH 121
Query: 226 LNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEE 283
+ + ++G C++N GL ++ + E V+ + + + V+ K G +
Sbjct: 122 IPDKISLIIGIFCMENFPYYGLKLIVEEHCGVKMEDVVKLDIGKGKFWVYTKW--GETKA 179
Query: 284 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNER 343
V L + IA C+ C DYT LAD+ G +G P G S + +R +
Sbjct: 180 VK---LKETHPYEQIA--CHVCTDYTAELADISTGSVGSP--DGWST------VFIRTAK 226
Query: 344 GKEMLS-LVKN-LLEITP 359
G+E+ + +V++ LE+ P
Sbjct: 227 GEEIFNKMVEDGYLEVKP 244
>gi|282165082|ref|YP_003357467.1| coenzyme F420 hydrogenase subunit beta [Methanocella paludicola
SANAE]
gi|282157396|dbj|BAI62484.1| coenzyme F420 hydrogenase subunit beta [Methanocella paludicola
SANAE]
Length = 292
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 27/245 (11%)
Query: 115 LGVHEEL--LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++E+ L A+ K AQ G+VTT+ L+ G+++ + V + P+P +
Sbjct: 3 FGTYKEVMALKAKDGKIGGVAQDGGVVTTLLCYALEKGVIDGAL-VAGKSETPWMPKPTI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSVE------HH 225
A T EE++AA G K T+SP ++T+ G++++ G CQ+ A++ + H
Sbjct: 62 ATTKEEIIAAAGTKYTISPVVSTIKDAAREYGLEKIAVVGTPCQIYAVQKMRLYGVGARH 121
Query: 226 LNLEKLYVLGTNCVDNGTREGLDKFLKAASSEP-ETVLHYEFMQDYKVHLKHLDGHIEEV 284
+ + +G C +N + GL ++ P E+V E + K +K
Sbjct: 122 IPDKVAMTVGIFCTENFSYAGLRTVIEDHCKVPIESVTKMEIGKG-KFWVKGAKD----- 175
Query: 285 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 344
+P + C+ C D T AD+ G +G P G S T R+ RG
Sbjct: 176 --VSIPIKETHKYEQDGCHVCSDLTAEFADISTGSIGTPD--GWSTT------FARSTRG 225
Query: 345 KEMLS 349
K++LS
Sbjct: 226 KDLLS 230
>gi|256811179|ref|YP_003128548.1| coenzyme F420-reducing hydrogenase subunit beta [Methanocaldococcus
fervens AG86]
gi|256794379|gb|ACV25048.1| coenzyme F420 hydrogenase, subunit beta [Methanocaldococcus fervens
AG86]
Length = 282
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 50/268 (18%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G +++++ AR T + ++ +Q GIV+T I L+ +++ VV +D P +
Sbjct: 4 FGAYKKVVSARSTLKEVLKKSQDGGIVSTAFIYGLENNLLDGVVV--ADNAGEFQAVPKV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVE------HH 225
A TPEEVL A G K T+ PN++ L + V G +++ G CQV+A+R + H
Sbjct: 62 ATTPEEVLEAAGTKYTVCPNISVLKSAVREYGCEKIGVVGTPCQVRAIRKLMKYPVGFRH 121
Query: 226 LNLEKLYVLGTNCVDNGTREGL------------DKFLKAASSEPETVLHYEFMQDYKVH 273
+ + V+G C++N GL + +K + + ++ + + V
Sbjct: 122 VPDKIALVIGIFCMENFPYNGLKLIVEEHCGVKMEDVVKMDIGKGKFWVYTRWGETKTVK 181
Query: 274 LKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQH 333
LK E PY + +C+ C DYT LAD+ G +G P G S
Sbjct: 182 LK------ETHPYEQI-----------ACHVCTDYTAELADISTGSVGSP--DGWST--- 219
Query: 334 PQYITVRNERGKEMLS-LVKN-LLEITP 359
+ +R +G+E+ + +V++ LE+ P
Sbjct: 220 ---VFIRTAKGEEIFNKMVEDGYLEVKP 244
>gi|20092529|ref|NP_618604.1| F420H2 dehydrogenase subunit F [Methanosarcina acetivorans C2A]
gi|19917799|gb|AAM07084.1| F(420)H(2) dehydrogenase, subunit FpoF [Methanosarcina acetivorans
C2A]
Length = 346
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 109/240 (45%), Gaps = 23/240 (9%)
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLA 181
+ ++K G+Q G+ + I + K G ++ V + + ++ P VL + E+V
Sbjct: 82 FFGARSKDNVGSQDGGVASGILKSLFKQGKIDCAVGITRN--EKWEPEVVLLTSAEDVER 139
Query: 182 AKGVKPTLSPNLNTLALVEA-AGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVD 240
+G K T P L AL EA R+ GV CQ A + ++N + + ++G C++
Sbjct: 140 TRGTKYTSDPVL--AALREAFEKYDRIAVIGVPCQAHAAHLIRENVNEKIVLIIGLLCME 197
Query: 241 NGTRE-GLDKFL-KAASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDV 297
+ + L+K + + + E + EF + + V+ K DG + VP D+
Sbjct: 198 SFHHDVMLEKIIPEILKVKLEDIRKMEFTKGKFWVYTK--DGEVHSVPI-----KDVAKF 250
Query: 298 IAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEI 357
C+ C DYT+ AD+ VG +G P + +R E G++ +V+ +EI
Sbjct: 251 ARNPCHHCCDYTSVFADISVGSVGAP--------DGWNSVFIRTEIGEKYFDMVREDMEI 302
>gi|333988462|ref|YP_004521069.1| coenzyme F420 hydrogenase subunit beta [Methanobacterium sp.
SWAN-1]
gi|333826606|gb|AEG19268.1| coenzyme F420 hydrogenase, subunit beta [Methanobacterium sp.
SWAN-1]
Length = 294
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++E++ AR T K ++ AQ GIV+ + L +++ V V +D P P +
Sbjct: 3 LGTYKEVVTARSTDKQIQKIAQDGGIVSALFCYALDEKIIDGAV-VAGPGEDFWKPEPKV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVEHH-----L 226
A + +E+LAA G K T SPN+ L V G++++ + CQ +R ++ +
Sbjct: 62 AMSSDEILAAAGTKYTFSPNVWMLKQAVRQYGLEKVGTVAIPCQTMGIRKMQSYPFGVRF 121
Query: 227 NLEKLYVL-GTNCVDNGTREGLDKFL-KAASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 284
+K+ +L G C++N E L F+ + A PE V + + K + D I
Sbjct: 122 LADKIALLTGIFCMENFPYESLKTFISEKAGVSPELVEKMDIGKG-KFFIHTADDVI--- 177
Query: 285 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
LP + C C DY LAD+ G +G P
Sbjct: 178 ---ALPLKETHGYEQNGCKVCLDYVAELADVSTGSVGSP 213
>gi|333911073|ref|YP_004484806.1| coenzyme F420 hydrogenase subunit beta [Methanotorris igneus Kol 5]
gi|333751662|gb|AEF96741.1| coenzyme F420 hydrogenase, subunit beta [Methanotorris igneus Kol
5]
Length = 282
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 122/258 (47%), Gaps = 30/258 (11%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++ ++ AR T K ++ +Q GIV+ I L+ G+++ V+ +D P +
Sbjct: 4 FGKYKTVVSARATDKKILKKSQDGGIVSAAFIYGLENGLLDGVIV--ADNAGEFKAVPKV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVE------HH 225
A TPEEVL A G K T+ PN++ L + V ++++ G CQ++A+R + H
Sbjct: 62 ATTPEEVLEAAGTKYTVCPNISVLKSAVREYALEKVGIVGTPCQIRAVRKLMKYPVGFRH 121
Query: 226 LNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEE 283
+ + +G C++N GL ++ + E V+ + + + V+ K E
Sbjct: 122 TDSKIALTIGIFCMENFPYMGLKTIVEEHCGVKMEDVVKMDIGKGKFWVYTKW-----GE 176
Query: 284 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNER 343
L + IA C+ C DYT LAD+ G +G P G S + VR R
Sbjct: 177 TKAIKLKETHPYEQIA--CHVCTDYTAELADISTGSVGSPD--GWST------VFVRTIR 226
Query: 344 GKEMLS-LVKN-LLEITP 359
G+E + +V++ LEI P
Sbjct: 227 GEEFFNKMVEDGYLEIKP 244
>gi|289192423|ref|YP_003458364.1| coenzyme F420 hydrogenase, subunit beta [Methanocaldococcus sp.
FS406-22]
gi|288938873|gb|ADC69628.1| coenzyme F420 hydrogenase, subunit beta [Methanocaldococcus sp.
FS406-22]
Length = 282
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 125/258 (48%), Gaps = 30/258 (11%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G +++++ AR T + ++ AQ GIV+T I L+ +++ V+ +D P +
Sbjct: 4 FGAYKKVVSARSTLKEVLKKAQDGGIVSTAFIYGLENNLLDGVIV--ADNAGEFKAVPKV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVE------HH 225
A TPEEVL A G K T+ PN++ L + V G +++ G CQV+A+R + H
Sbjct: 62 ATTPEEVLEAAGTKYTVCPNISVLKSAVREYGCEKIGVVGTPCQVRAVRKLMKYPVGFRH 121
Query: 226 LNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEE 283
+ + ++G C++N GL ++ + E V+ + + + V+ + E
Sbjct: 122 VPDKIALIIGIFCMENFPYNGLKLIVEEHCGVKMEDVVKMDIGKGKFWVYTRW-----GE 176
Query: 284 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNER 343
L + IA C+ C DYT LAD+ G +G P G S + +R +
Sbjct: 177 TKAIKLKETHPYEQIA--CHVCTDYTAELADISTGSVGSP--DGWST------VFIRTAK 226
Query: 344 GKEMLS-LVKN-LLEITP 359
G+E+ + +V++ LE+ P
Sbjct: 227 GEEIFNKMVEDGYLEVKP 244
>gi|374635417|ref|ZP_09707016.1| coenzyme F420 hydrogenase, subunit beta [Methanotorris formicicus
Mc-S-70]
gi|373562290|gb|EHP88505.1| coenzyme F420 hydrogenase, subunit beta [Methanotorris formicicus
Mc-S-70]
Length = 282
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 125/258 (48%), Gaps = 30/258 (11%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++ ++ AR T + ++ +Q GIV+ I L+ +++ VV +D +D P +
Sbjct: 4 FGKYKTVVSARATDKRILKKSQDGGIVSAAFIYGLENNLLDGVVV--ADKEDGFKAIPKV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVE------HH 225
A TPEE+L A G K T+ PN++ L + V ++++ G CQ++A+R + H
Sbjct: 62 ATTPEEILEAGGTKYTVCPNISVLKSAVREYALEKVGVVGTPCQIRAVRKLMKYPVGFRH 121
Query: 226 LNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEE 283
+ + ++G C++N GL ++ + + E V+ + + + V+ K E
Sbjct: 122 TDSKIALLIGIFCMENFPYNGLKLIVEEHCNVKIEDVVKMDIGKGKFWVYTKW-----GE 176
Query: 284 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNER 343
L + IA C+ C DYT LAD+ G +G P G S + +R R
Sbjct: 177 TKAIKLKETHPYEQIA--CHVCTDYTAELADISTGSVGSP--DGWST------VFIRTAR 226
Query: 344 GKEMLS-LVKN-LLEITP 359
G+E + +V++ LE+ P
Sbjct: 227 GEEFFNKMVEDGYLEVKP 244
>gi|408380956|ref|ZP_11178506.1| coenzyme F420-reducing hydrogenase subunit beta [Methanobacterium
formicicum DSM 3637]
gi|407816221|gb|EKF86783.1| coenzyme F420-reducing hydrogenase subunit beta [Methanobacterium
formicicum DSM 3637]
Length = 294
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 16/218 (7%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++E++ AR T K ++ AQ GIV+ + L G+++ V V D P P++
Sbjct: 3 LGTYKEVVAARSTDKQIQKLAQDGGIVSGLFCYALDEGLIDGAV-VAGPSDVMWKPEPMV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVEHH------ 225
A + +E+LAA G K T SPN+ L V G+++L + CQ +R ++ +
Sbjct: 62 AMSSDEILAAAGTKYTFSPNVWMLKKAVRQYGLEKLGTVAIPCQSMGIRKMQSYPFGVKN 121
Query: 226 LNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP 285
+ + +LG C++N E L F+ + ++ + K ++ D +
Sbjct: 122 VASKIALMLGIFCMENFPYESLRTFISEKAGVDFDLVEKMDIGKGKFWIETADQTL---- 177
Query: 286 YFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
+P + C C DY LAD+ G +G P
Sbjct: 178 --SIPLKETHGYEQNGCKVCLDYVAELADVSTGSVGTP 213
>gi|298528806|ref|ZP_07016210.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Desulfonatronospira thiodismutans ASO3-1]
gi|298512458|gb|EFI36360.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Desulfonatronospira thiodismutans ASO3-1]
Length = 432
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 128/317 (40%), Gaps = 64/317 (20%)
Query: 63 DHCSRCGLCDTYYIAHVKDACAFLGDGMSR-------------------IEGLETVVHGR 103
D C CG C T+ A A DG+ R +E L+ ++
Sbjct: 15 DRCHMCGGCVTFCTAINYGALEIGEDGLPRYKDQNSCLECGICYMLCPEVEELDVEINSL 74
Query: 104 GRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPD 163
++ + +L AR + ++ A G VT I + ++++G ++ V S
Sbjct: 75 ANWEEPAGKI---ISSSILRARDRQVLDRATDGGAVTAILLHLMESGRIDGAVV--SRNK 129
Query: 164 DRLSPRPVLARTPEEVLAAKGVK--------------PTLSPNLNTLALVEAAGVKRLLF 209
+ P+LART E++L G T SP++ L V+ G + + F
Sbjct: 130 GLFNREPMLARTSEQILECCGSYFDVSHGTYHYGTQYSTYSPSVQALGDVKTQGFRSIAF 189
Query: 210 CGVGCQVQALRSVEHH--LNLEKLY-VLGTNCV-----DNGTREGLDKFLKAASSEPETV 261
G CQV+ LR ++ + + +Y VLG C D+ +R+ L+K + + + + +
Sbjct: 190 VGTPCQVRTLRKMQALGVVPADAIYCVLGLFCTGNFEFDDNSRKRLEKTGEFSWKDVQKI 249
Query: 262 ----LHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVV 317
Y +MQD +H LP ++L + +C C DY+ LADL
Sbjct: 250 NVTDKVYIYMQDGSIH--------------ALPLDELDFIKRRACNYCHDYSAELADLSF 295
Query: 318 GYMGVPKYTGISMTQHP 334
G +G +T+ P
Sbjct: 296 GGVGSDDGWTTVLTRSP 312
>gi|44708|emb|CAA43503.1| F420-reducing hydrogenase subunit [Methanococcus voltae PS]
Length = 282
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 38/266 (14%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
+Q GIV+ I L++G+++ V+ D + P + T +EVL+A G K T SPN
Sbjct: 24 SQDGGIVSAAYIHGLESGLLDGVIV--RDKGEDFCAIPKVLTTVDEVLSAAGTKYTTSPN 81
Query: 193 LNTL-ALVEAAGVKRLLFCGVGCQVQALRSV------EHHLNLEKLYVLGTNCVDNGTRE 245
L+ L + V G ++ F G CQVQ++R + H+ + ++G C++N
Sbjct: 82 LSVLKSAVREYGCDKVGFVGTPCQVQSIRKMLKYPVGYRHVPDKIALIMGIFCMENFPYN 141
Query: 246 GLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCY 303
GL ++ + E V + + + V+ K D + D SC+
Sbjct: 142 GLKTIIEEHCGIKMEDVAKTDIGKGKFWVYSKWGD-------VKTIKLKDTHPYEQHSCH 194
Query: 304 SCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSL--------VKNLL 355
C DYT LAD+ G +G P G S I +R +G+ +KN+
Sbjct: 195 VCMDYTAELADISTGSVGSP--DGWST------IFIRTAKGEAFYKAMEEAGVIEIKNID 246
Query: 356 EITPTISSGDRRPFVMETVKADDNAK 381
++ P + ++ ++ K D+N K
Sbjct: 247 DVKPGLGLVEK----LDNSKKDNNGK 268
>gi|355571436|ref|ZP_09042688.1| coenzyme F420 hydrogenase, subunit beta [Methanolinea tarda NOBI-1]
gi|354825824|gb|EHF10046.1| coenzyme F420 hydrogenase, subunit beta [Methanolinea tarda NOBI-1]
Length = 292
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 106/219 (48%), Gaps = 17/219 (7%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++ + AR T ++ AQ GIVT + L+ G+++ + V D+ PRP +
Sbjct: 5 LGKYKLCVSARSTDKAILKKAQDGGIVTQLFKFALEEGIIDGAI-VAGPGDEPWRPRPFI 63
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSVEHH------ 225
A T EE++ A G K +SP ++ + + G+ ++ G CQ+QA+R + +
Sbjct: 64 ATTVEELMTAGGTKYNISPQVSWIKEATRSYGLDKIGIVGTPCQMQAVRKGQLYPVGWRD 123
Query: 226 LNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 284
++ + +G C++N + + + + ++ A+ + E V E + K + G + ++
Sbjct: 124 VDDKIKLAIGIFCMENFSYQSIRQLVEDHAAMKMEAVKKMEIGKG-KFWVYGQRGQVVQL 182
Query: 285 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
P + P+C+ C DY LAD+ G +G P
Sbjct: 183 PLKVTHKYE-----QPACHVCLDYVANLADVSTGSVGSP 216
>gi|124484841|ref|YP_001029457.1| coenzyme F420-reducing hydrogenase subunit beta [Methanocorpusculum
labreanum Z]
gi|124362382|gb|ABN06190.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanocorpusculum labreanum Z]
Length = 290
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
+Q GIVT + L+TG+++ + V + P P++A T EE+ A++G K ++SPN
Sbjct: 24 SQDGGIVTAMFAYALETGIIDGAI-VAGPGAEPYKPEPMIATTVEELFASRGTKYSVSPN 82
Query: 193 LNTLALVEAA----GVKRLLFCGVGCQVQALRSVE-HHLNLEKL-----YVLGTNCVDNG 242
LAL++ A G+ ++ G CQ+QA+R + + + L + LG C++N
Sbjct: 83 ---LALIKEATRSYGLDKIGIVGTPCQIQAVRKAQLYPIGLRDVPDKIALALGIFCMENF 139
Query: 243 TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSC 302
+GL + + E + + + + E +P P C
Sbjct: 140 PYQGLFQMV-----EDHCATKIDNVTKMDIGKGKFSVYTERGVNSQIPLKVTHKYEQPGC 194
Query: 303 YSCFDYTNALADLVVGYMGVP 323
+ C DY +AD+ G +G P
Sbjct: 195 HVCLDYVANMADISTGSVGTP 215
>gi|410722453|ref|ZP_11361740.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanobacterium
sp. Maddingley MBC34]
gi|410596697|gb|EKQ51355.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanobacterium
sp. Maddingley MBC34]
Length = 294
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 16/218 (7%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++E++ AR T K ++ AQ GIV+ + L G+++ V V D P P++
Sbjct: 3 LGTYKEVVAARSTDKQIQKLAQDGGIVSGLFCYALDEGLIDGAV-VAGPSDVMWKPEPMV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVEHH-LNLEK 230
A + +E+LAA G K T SPN+ L V G+++L + CQ +R ++ + ++
Sbjct: 62 AMSSDEILAAAGTKYTFSPNVWMLKKAVRQYGLEKLGTVAIPCQSMGIRKMQSYPFGVKN 121
Query: 231 L-----YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP 285
+ +LG C++N E L F+ + ++ + K ++ D +
Sbjct: 122 VADKIALMLGIFCMENFPYESLRTFISEKAGVDFDLVEKMDIGKGKFWIETADQTL---- 177
Query: 286 YFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
+P + C C DY LAD+ G +G P
Sbjct: 178 --SIPLKETHGYEQNGCKVCLDYVAELADVSTGSVGTP 213
>gi|336121173|ref|YP_004575948.1| coenzyme F420 hydrogenase subunit beta [Methanothermococcus
okinawensis IH1]
gi|336121875|ref|YP_004576650.1| coenzyme F420 hydrogenase subunit beta [Methanothermococcus
okinawensis IH1]
gi|334855694|gb|AEH06170.1| coenzyme F420 hydrogenase, subunit beta [Methanothermococcus
okinawensis IH1]
gi|334856396|gb|AEH06872.1| coenzyme F420 hydrogenase, subunit beta [Methanothermococcus
okinawensis IH1]
Length = 282
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 118/268 (44%), Gaps = 50/268 (18%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++ ++ AR T K ++ +Q GIV++ I L+ +++ V+ +D + P P +
Sbjct: 4 FGNYKTIISARATDKKILKKSQDGGIVSSAFIYGLENNLLDGVIV--ADKGEGCKPVPKV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVE------HH 225
A TPEEVL A G K T+ PN++ L + + G ++L G CQV A R H
Sbjct: 62 ATTPEEVLKAGGTKYTVCPNISVLKSAIREYGCEKLGVVGTPCQVIATRKAMKYPVGFRH 121
Query: 226 LNLEKLYVLGTNCVDNGTREGL------------DKFLKAASSEPETVLHYEFMQDYKVH 273
+ + ++G C++N G+ D K + + ++ ++ + +
Sbjct: 122 MPDKIALIMGIFCMENFPYNGMKTIIEEHCGVKIDDVAKLDIGKGKFWVYTKWGEAKSIK 181
Query: 274 LKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQH 333
LK E PY +C+ C DYT LAD+ G +G P G S
Sbjct: 182 LK------ETHPYE-----------QKACHVCTDYTAELADISTGSVGSP--DGWSS--- 219
Query: 334 PQYITVRNERGKEMLSLV--KNLLEITP 359
+ +R +G+E + + + LE P
Sbjct: 220 ---VFIRTSKGEEFFNKMVDEGYLETKP 244
>gi|333911656|ref|YP_004485389.1| coenzyme F420 hydrogenase subunit beta [Methanotorris igneus Kol 5]
gi|333752245|gb|AEF97324.1| coenzyme F420 hydrogenase, subunit beta [Methanotorris igneus Kol
5]
Length = 282
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 122/258 (47%), Gaps = 30/258 (11%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++ ++ AR T K ++ +Q GIV+ I L+ G+++ V+ +D P +
Sbjct: 4 FGKYKTVVSARATDKKILKKSQDGGIVSAAFIYGLENGLLDGVIV--ADNAGEFKAVPKV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVE------HH 225
A TPEEVL A G K T+ PN++ L + V ++++ G CQ++A+R + H
Sbjct: 62 ATTPEEVLEAAGTKYTVCPNISVLKSAVREYALEKVGIVGTPCQIRAVRKLMKYPVGFRH 121
Query: 226 LNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEE 283
+ + +G C++N GL ++ + E V+ + + + V+ K E
Sbjct: 122 TDSKIALTIGIFCMENFPYMGLKTIVEEHCGVKMEDVVKMDIGKGKFWVYTKW-----GE 176
Query: 284 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNER 343
L + IA C+ C DYT LAD+ G +G P G S + VR +
Sbjct: 177 TKAIKLKETHPYEQIA--CHVCTDYTAELADISTGSVGSPD--GWST------VFVRTTK 226
Query: 344 GKEMLS-LVKN-LLEITP 359
G+E + +V++ LEI P
Sbjct: 227 GEEFFNKMVEDGYLEIKP 244
>gi|312137255|ref|YP_004004592.1| coenzyme f420-reducing hydrogenase subunit beta [Methanothermus
fervidus DSM 2088]
gi|311224974|gb|ADP77830.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanothermus
fervidus DSM 2088]
Length = 280
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 18/219 (8%)
Query: 115 LGVHEELLYAR-KTKPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG + E + A+ K K ++ +Q G+V+ + I L+ G++E V V D+ P+P +
Sbjct: 3 LGKYVEAVAAKCKDKEIQKVSQDGGVVSGLLIYALEEGIIEGAV-VSKVTDEPWKPQPHI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKL 231
A T +E+LAA G K T+ PN+ + G+++L GV CQ+ A+R ++ + +
Sbjct: 62 ATTRDEILAAAGTKYTMCPNVWMIKEATRQYGIEKLGIVGVPCQIGAVRKMQTYPFGARF 121
Query: 232 ------YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGH-IEEV 284
++G C++N L+ F+ + L + + + + ++E
Sbjct: 122 VPDKIKLIVGIYCMENFPYSSLETFVSEKMN-----LSLDIVDKMDIGKGKFWAYTVDET 176
Query: 285 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
+P + SC C DYT LAD+ G +G P
Sbjct: 177 A--TIPLKETHGYEQSSCKVCNDYTAELADISTGSVGTP 213
>gi|417822428|ref|ZP_12469027.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunit family
protein [Vibrio cholerae HE48]
gi|340049528|gb|EGR10443.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunit family
protein [Vibrio cholerae HE48]
Length = 268
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPT-LSPNLNT 195
GI++ AI +L+ G+V+ V+ +++ + L +++T +EVL+A G + + SP +N
Sbjct: 100 GILSQTAIYLLEQGLVDGVIHIKASDEKPLLNVATISKTADEVLSAAGSRYSPASPLINL 159
Query: 196 LALVEAAGVKRLLFCGVGCQVQALR---SVEHHLNLEKLYVLGTNCVDNGTREGLDKFLK 252
+ +V+ ++ F G C V ALR SVE + Y+L C +REG++ L
Sbjct: 160 VQIVKGNPDQKFCFIGKPCDVTALRNLISVEPSIGKSIPYLLSFFCAGTPSREGVEAVLD 219
Query: 253 AASSEPETVLHYEF 266
+ +P+ ++ ++F
Sbjct: 220 RLNVKPQDIIKFDF 233
>gi|410670515|ref|YP_006922886.1| coenzyme F420 hydrogenase, beta subunit [Methanolobus psychrophilus
R15]
gi|409169643|gb|AFV23518.1| coenzyme F420 hydrogenase, beta subunit [Methanolobus psychrophilus
R15]
Length = 386
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 102/234 (43%), Gaps = 16/234 (6%)
Query: 99 VVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCV 158
V + + R + ++ +G A+ P Q +VT++ L+ G+++ +
Sbjct: 103 VCYNQCPRTITTEEGLIGKIRHAYCAKTAIPDLKGQDGAVVTSMLAYALEEGLIDCAIVT 162
Query: 159 QSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 218
++ P PV+A+T +EVL A G + S + +L G++ + F G C + A
Sbjct: 163 VKSEEEPWKPVPVIAKTYDEVLEAAGSIYSHSMTIESLMSAVKQGMRSIAFVGTSCNIDA 222
Query: 219 LRSVE-------HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYK 271
+ ++ H + +G C+D + EG+ +F+++ + E ++ K
Sbjct: 223 VYKMQKSPYGFLHLFMRANILKMGLFCMDTFSYEGIKEFVQSKD------MRLEDIESMK 276
Query: 272 VHLKHLDGHI-EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK 324
+ L+ EE+ F L +L + SC C D T +DL G +G PK
Sbjct: 277 IRKGKLELQASEELKVFGL--EELDRYRSSSCKYCTDLTAESSDLSFGGVGTPK 328
>gi|15668202|ref|NP_246995.1| coenzyme F420-reducing hydrogenase subunit beta [Methanocaldococcus
jannaschii DSM 2661]
gi|2494430|sp|Q60341.1|FRHB_METJA RecName: Full=Coenzyme F420 hydrogenase subunit beta; AltName:
Full=8-hydroxy-5-deazaflavin-reducing hydrogenase
subunit beta; Short=FRH
gi|1590834|gb|AAB98011.1| coenzyme F420-reducing hydrogenase, beta subunit (frhB)
[Methanocaldococcus jannaschii DSM 2661]
Length = 287
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 125/258 (48%), Gaps = 30/258 (11%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G +++++ AR T + ++ AQ GIV+T I L+ +++ V+ +D P +
Sbjct: 9 FGSYKKVVSARSTLKEVLKKAQDGGIVSTAFIYGLENNLLDGVIV--ADNAGEFKAVPKV 66
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVE------HH 225
A TPEEVL A G K T+ PN++ L + V G +++ G CQV+A+R + H
Sbjct: 67 ATTPEEVLEAAGTKYTVCPNISVLKSAVREYGCEKIGVVGTPCQVRAVRKLMKYPVGFRH 126
Query: 226 LNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHIEE 283
+ + ++G C++N GL ++ + E V+ + + + V+ + E
Sbjct: 127 VPDKIALIIGIFCMENFPYYGLKLIVEEHCGVKMEDVVKMDIGKGKFWVYTRW-----GE 181
Query: 284 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNER 343
L + IA C+ C DYT LAD+ G +G P G S + +R +
Sbjct: 182 TKAIKLKETHPYEQIA--CHVCTDYTAELADISTGSVGSP--DGWST------VFIRTAK 231
Query: 344 GKEMLS-LVKN-LLEITP 359
G+E+ + +V++ LE+ P
Sbjct: 232 GEEIFNKMVEDGYLEVKP 249
>gi|308272003|emb|CBX28611.1| hypothetical protein N47_G39350 [uncultured Desulfobacterium sp.]
Length = 374
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 36/245 (14%)
Query: 122 LYARKTKPV--EGAQWTGIVTTIAIEMLKTGMVE-AVVCVQSDPDDRLSPRPVLARTPEE 178
L AR T P E A G+VT + + + + G ++ A+V +S R RP LA + EE
Sbjct: 90 LVARTTNPAIKERATDGGVVTALLLNLFEKGHIDGAIVTKESGLFQR---RPWLAHSKEE 146
Query: 179 VLAAKG--------------VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEH 224
++ + G + T SP+ + + + + R+ F G CQV +R ++
Sbjct: 147 IIGSAGFHFDASHGLQLFSELYSTYSPSFVKVGYISSKRLDRVAFVGTPCQVNTIRRIQA 206
Query: 225 HLNLEK----LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLK-HLDG 279
L +E + G C N F + E + ++ + + K+++K HL
Sbjct: 207 -LGIEPANSITIIFGLFCTGNFI------FGPEQQHQLEKIGNFRWDEVNKINVKEHLMI 259
Query: 280 HI--EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 337
H+ +E+ + L D + A C+ CFDY+ ADL G +G P+ +T+ Q
Sbjct: 260 HLRNKEIRHISLDQLDFMKRHA--CHYCFDYSAEFADLSFGGLGSPEGWTTVITRSLQGQ 317
Query: 338 TVRNE 342
V N+
Sbjct: 318 AVLND 322
>gi|296109548|ref|YP_003616497.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[methanocaldococcus infernus ME]
gi|295434362|gb|ADG13533.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanocaldococcus infernus ME]
Length = 352
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 113/247 (45%), Gaps = 30/247 (12%)
Query: 109 SLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
++D YLG++ A+ ++ AQ G+V+ I I L+ +++ + ++ D + L P
Sbjct: 89 EMEDKYLGIYR----AKSKLEIKNAQNGGVVSAILINALEEELIDGAIVIKQD-NWTLEP 143
Query: 169 RPVLARTPEEVLAAKGVK--PTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSVEHH 225
LA T EEV+ A G K +SP LN L V ++RL G C ++A+ ++
Sbjct: 144 ISYLATTKEEVVKAAGSKYLRKVSP-LNALKKAVMEEKLERLAIVGTPCIIEAMAKIQSS 202
Query: 226 LN-----LEKLYVLGTN--CVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 278
+N K L + C + + K L+ P + E ++ K L +D
Sbjct: 203 VNDLLKPFRKAIRLKISLFCFEIYDYAKMLKKLEEEGINPWDIKKME-IERGKFLLYLVD 261
Query: 279 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 338
G I+E +L V+ C SC D+T +D+ VG +G P+ G S +
Sbjct: 262 GFIKE-----YKIKELDPVMREGCKSCIDFTGLYSDISVGNVGTPE--GYST------VI 308
Query: 339 VRNERGK 345
+RN+ G+
Sbjct: 309 IRNKWGE 315
>gi|397780732|ref|YP_006545205.1| coenzyme F420 hydrogenase beta subunit [Methanoculleus bourgensis
MS2]
gi|396939234|emb|CCJ36489.1| coenzyme F420 hydrogenase beta subunit [Methanoculleus bourgensis
MS2]
Length = 339
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 109/242 (45%), Gaps = 27/242 (11%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
LG H +++ AR PVE Q G VT I + L G+++AVV V DP + P +
Sbjct: 78 LGPHLDIVAARSVFPVERKQSGGAVTAILVNALDEGLIDAVVTVTRDPWT-MKPSSAVIT 136
Query: 175 TPEEVLAAKGVKPT-LSPNLNTL-ALVEAAGVKRLLFCGVGC---QVQALRSVEHHL--- 226
+ + ++ G + + P L +L V +R+ GV C QA+R+ +H L
Sbjct: 137 SSDALIQHAGSRYSWWVPLLASLKEAVVTRKYRRIAVVGVPCVARATQAIRASDHELLRP 196
Query: 227 -NLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLK-HLDGHIEEV 284
V+G C E D + K + E+ E ++ +K LD ++++
Sbjct: 197 YAKAIRLVIGLFCT-----ETFD-YAKLVEGKLESERRIEPWDIRRLDIKGKLDVYLQDE 250
Query: 285 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK-YTGISMTQHPQYITVRNER 343
+ +P +L + + P C C D+T AD+ G +G P+ YT + +RN+
Sbjct: 251 RHISIPLAELEESVRPGCRVCTDFTAVEADVSAGAVGSPEGYT---------TLVIRNDI 301
Query: 344 GK 345
G+
Sbjct: 302 GR 303
>gi|21227327|ref|NP_633249.1| coenzyme F420 hydrogenase subunit beta [Methanosarcina mazei Go1]
gi|452209810|ref|YP_007489924.1| Coenzyme F420-dependent oxidoreductase [Methanosarcina mazei Tuc01]
gi|20905682|gb|AAM30921.1| Coenzyme F420 hydrogenase, beta subunit [Methanosarcina mazei Go1]
gi|452099712|gb|AGF96652.1| Coenzyme F420-dependent oxidoreductase [Methanosarcina mazei Tuc01]
Length = 387
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 16/232 (6%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDR 165
R + ++ +G A+ P Q G+VT++ + L G+++ V ++
Sbjct: 110 RTITTEEGLIGSFRYAYAAQSAIPEIKGQDGGVVTSLLLYALDEGLIDCAVVTVHSEEEP 169
Query: 166 LSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE-- 223
P P++A+T EE+L + G + S L L G+ + F G C + A+ ++
Sbjct: 170 WKPVPIVAKTREEILKSSGSIYSHSMTLEALMSAVKQGMNSVAFVGTSCNIDAVTKMQKS 229
Query: 224 -----HHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQ-DYKVHLKHL 277
H K+ LG C+D EG+ L++ + V + + ++V LK
Sbjct: 230 SYGFLHLFMRAKVLKLGLFCMDTFAYEGIKAVLESYGITLDNVDAMKIRKGKFEVALKDG 289
Query: 278 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK-YTGI 328
HI E+ F + + SC C D T +D+ G +G P+ YT +
Sbjct: 290 KEHIFELSEF-------DEYRSSSCRFCTDLTAENSDISFGGVGSPRGYTTV 334
>gi|147919452|ref|YP_686808.1| coenzyme F420-reducing hydrogenase subunit beta [Methanocella
arvoryzae MRE50]
gi|110622204|emb|CAJ37482.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanocella
arvoryzae MRE50]
Length = 286
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 17/199 (8%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
AQ G+VT + L G+++ + V D P+PV+A T EE++AA G K T+SPN
Sbjct: 23 AQDGGVVTALLCYALDQGVIDGAI-VAGKSDTPWLPKPVVATTKEEIIAAAGTKYTISPN 81
Query: 193 LNTL-ALVEAAGVKRLLFCGVGCQVQALRSVE------HHLNLEKLYVLGTNCVDNGTRE 245
+ + V G+ ++ G CQ+ A R ++ H+ + +G C +N +
Sbjct: 82 MAAIKTAVREYGLDKVALVGTPCQIYAARKMQLYPFGARHVGDKIALTIGIFCTENFSYA 141
Query: 246 GLDKFLKAASSEP-ETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYS 304
GL ++ P E+V K+ + ++ +P + +
Sbjct: 142 GLKTIIEDHCKVPVESV--------KKMEIGKGKFSVKAAKDVAIPIKETHKYEQDGDHV 193
Query: 305 CFDYTNALADLVVGYMGVP 323
C D T AD+ G +G P
Sbjct: 194 CTDLTAEFADIATGSIGTP 212
>gi|73668420|ref|YP_304435.1| coenzyme F420 hydrogenase subunit beta [Methanosarcina barkeri str.
Fusaro]
gi|72395582|gb|AAZ69855.1| coenzyme F420 hydrogenase, beta subunit [Methanosarcina barkeri
str. Fusaro]
Length = 387
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 118/291 (40%), Gaps = 28/291 (9%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLG--DGMSRIEG---LETVVHGRGRRKDSLDDTYLGVHE 119
C+ CG C +C ++ DG ++ G V + + R + ++ +G
Sbjct: 72 CTLCGACAA--------SCEYITIEDGTPKLVGPCKACGVCYYQCPRTITTEEGLIGSFR 123
Query: 120 ELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEV 179
AR P Q G+VT++ + L G++++ V ++ P PV+A+ EE+
Sbjct: 124 FAYAARSAIPEIKGQDGGVVTSLLLYALDEGLIDSAVVTTRSKEEPWKPVPVVAKKREEI 183
Query: 180 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE-------HHLNLEKLY 232
L + G + S L L G+ + F G C + A+ ++ H K+
Sbjct: 184 LESSGSIYSHSMTLEALMSAIKQGMNSVAFVGTSCNIDAVTKMQKSSYGFLHLFMRAKVL 243
Query: 233 VLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQD-YKVHLKHLDGHIEEVPYFCLPA 291
LG C+D + EG+ L + E V + + ++V LK I ++ F
Sbjct: 244 KLGLFCMDTFSYEGIKAVLGSYGITLENVDAMKIRKGRFEVTLKDGKQQIFDLSEF---- 299
Query: 292 NDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNE 342
+ + SC C D T +D+ G +G P+ +T+ + NE
Sbjct: 300 ---DEYRSSSCRFCTDLTAENSDISFGGVGSPRGWTTVLTRSALGYEIFNE 347
>gi|325957979|ref|YP_004289445.1| coenzyme F420 hydrogenase subunit beta [Methanobacterium sp. AL-21]
gi|325329411|gb|ADZ08473.1| coenzyme F420 hydrogenase, subunit beta [Methanobacterium sp.
AL-21]
Length = 294
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 20/220 (9%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++E++ AR T K ++ AQ GIV+ + L+ +++ V V D P P++
Sbjct: 3 LGTYKEVVTARSTDKEIQKIAQDGGIVSALFCYALEEKLIDGAV-VAGPGKDFWKPEPMV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVEHH-----L 226
A+T +E+LAA G K T SPN+ L V G++++ + CQ +R ++ +
Sbjct: 62 AQTADEILAAAGTKYTFSPNVLMLKKAVRQYGLEKVGTVAIPCQAMGIRKMQSYPFGVRF 121
Query: 227 NLEKLYVL-GTNCVDNGTREGLDKFL-KAASSEPETVLHYEFMQ-DYKVHLKHLDGHIEE 283
+K+ +L G C++N L F+ + PE V + + + VH
Sbjct: 122 LADKIALLTGIFCMENFPFASLQTFISEKMGVSPELVEKMDIGKGKFWVHTAD------- 174
Query: 284 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
+P + C C DY LAD+ G +G P
Sbjct: 175 -DVLSIPLKETHGYEQSGCKVCLDYVAELADVSTGSVGSP 213
>gi|148643181|ref|YP_001273694.1| coenzyme F420-reducing hydrogenase subunit beta [Methanobrevibacter
smithii ATCC 35061]
gi|148552198|gb|ABQ87326.1| coenzyme F420-reducing hydrogenase, beta subunit, FrhB
[Methanobrevibacter smithii ATCC 35061]
Length = 285
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 32/260 (12%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++E + AR T + E AQ GI + + I L+ ++E V V DP D P P +
Sbjct: 3 LGTYKEAVAARSTDKRIQEVAQDGGIASALLIYALENNIIEGAV-VAGDPGDDWVPIPEI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLALVEAA---GVKRLLFCGVGCQVQALRSVEHH---- 225
A T +E+L+A G K ++SPN+ + EAA G++ + CQ+Q +R ++ +
Sbjct: 62 ATTADEILSAAGTKYSMSPNV--WGIKEAARQHGIESIGTVVTPCQMQGIRKMQAYPFST 119
Query: 226 -LNLEKLYVL-GTNCVDNGTREGLDKFLKA-ASSEPETVLHYEFMQ-DYKVHLKHLDGHI 281
+K+ +L G C++N LD F K + + V + + + ++ + D
Sbjct: 120 RFIADKIKLLVGIFCMENFPMASLDTFTKGLMDVDLDKVTKMDIGKGKFWIYTEGSD-EP 178
Query: 282 EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRN 341
+ +P + C C DY AD+ G +G P +T R
Sbjct: 179 QGIPIKATHGYE-----QAGCNICNDYVCEFADISTGSVGAPDGWSTVLT--------RT 225
Query: 342 ERGKEMLSLV--KNLLEITP 359
+ G ++ S L+E P
Sbjct: 226 DAGADIFSAAVDAGLIETKP 245
>gi|222445412|ref|ZP_03607927.1| hypothetical protein METSMIALI_01048 [Methanobrevibacter smithii
DSM 2375]
gi|222434977|gb|EEE42142.1| coenzyme F420 hydrogenase, subunit beta [Methanobrevibacter smithii
DSM 2375]
Length = 285
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++E + AR T + E AQ GI + + I L+ ++E V V DP D P P +
Sbjct: 3 LGTYKEAVAARSTDKRIQEVAQDGGIASALLIYALENNIIEGAV-VAGDPGDDWVPIPEI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLALVEAA---GVKRLLFCGVGCQVQALRSVEHH---- 225
A T +E+L+A G K ++SPN+ + EAA G++ + CQ+Q +R ++ +
Sbjct: 62 ATTADEILSAAGTKYSMSPNV--WGIKEAARQHGIESIGTVVTPCQMQGIRKMQAYPFST 119
Query: 226 -LNLEKLYVL-GTNCVDNGTREGLDKFLKA 253
+K+ +L G C++N LD F K
Sbjct: 120 RFIADKIKLLVGIFCMENFPMASLDTFTKG 149
>gi|261350026|ref|ZP_05975443.1| coenzyme F420 hydrogenase, subunit beta [Methanobrevibacter smithii
DSM 2374]
gi|288860812|gb|EFC93110.1| coenzyme F420 hydrogenase, subunit beta [Methanobrevibacter smithii
DSM 2374]
Length = 285
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++E + AR T + E AQ GI + + I L+ ++E V V DP D P P +
Sbjct: 3 LGTYKEAVAARSTDKRIQEVAQDGGIASALLIYALENNIIEGAV-VAGDPGDDWVPIPEI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLALVEAA---GVKRLLFCGVGCQVQALRSVEHH---- 225
A T +E+L+A G K ++SPN+ + EAA G++ + CQ+Q +R ++ +
Sbjct: 62 ATTADEILSAAGTKYSMSPNV--WGIKEAARQHGIESIGTVVTPCQMQGIRKMQAYPFST 119
Query: 226 -LNLEKLYVL-GTNCVDNGTREGLDKFLKA 253
+K+ +L G C++N LD F K
Sbjct: 120 RFIADKIKLLVGIFCMENFPMASLDTFTKG 149
>gi|20094236|ref|NP_614083.1| bifunctional coenzyme F420-reducing hydrogenase subunit
beta/oxidoreductase [Methanopyrus kandleri AV19]
gi|19887267|gb|AAM02013.1| Coenzyme F420-reducing hydrogenase, beta subunit fused to
oxidoreductase related to nitrite reductase
[Methanopyrus kandleri AV19]
Length = 668
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 35/238 (14%)
Query: 131 EGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLS 190
E Q G VT +A L+ G+ +AVV V + P + PE+V G K T
Sbjct: 113 ELGQDGGAVTALARYALEEGLADAVVGVTAG--SAWKPCVTVVEDPEKVKDLAGSKYTRV 170
Query: 191 PNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK-------------------L 231
+ LA G++R+L G+ CQV L ++H + K +
Sbjct: 171 GLVEALAEAADRGIERVLAIGLPCQVNGLAKIQHFEIVAKGARALRNIDGSPAEKLPEVV 230
Query: 232 YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPA 291
+G C N EGL K L+ + E V ++ K+ ++ G +E
Sbjct: 231 ATIGLFCTKNFEYEGLVKLLREKGVDIEDVERFDITSG-KLRVEISGGETKE-----YDV 284
Query: 292 NDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 349
+ + I C C D+T LAD+ VG +G P+ G++ + +R+E G+E++
Sbjct: 285 KEFEEAIPEGCRICNDFTARLADVSVGSVGTPE--GVTT------LLIRSETGEELVE 334
>gi|7649026|gb|AAF65743.1|AF228526_1 F420H2 dehydrogenase subunit FpoF [Methanosarcina mazei Go1]
Length = 346
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 111/250 (44%), Gaps = 28/250 (11%)
Query: 117 VHEELLYARK-----TKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPV 171
+ ELL RK +K G+Q G+ + I + G ++ V + + + P V
Sbjct: 72 IENELLNVRKFFGAKSKDNAGSQDGGVTSGILKALFNKGEIDCAVGITRN--ENWEPEVV 129
Query: 172 LARTPEEVLAAKGVKPTLSPNLNTLALVEA-AGVKRLLFCGVGCQVQALRSVEHHLNLEK 230
L + E+V +G K T P + AL EA R+ GV CQ A R + ++N +
Sbjct: 130 LLTSAEDVERTRGTKYTSDPVV--AALREAFEKYDRIAVVGVPCQAHAARLIRENVNEKI 187
Query: 231 LYVLGTNCVDNGTRE-GLDKFL-KAASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYF 287
+ ++G C+++ + LDK + + ++ EF + + V+ K DG + VP
Sbjct: 188 VLIIGLLCMESFHHDVMLDKIIPEIMKVNVRDIVKMEFTKGKFWVYTK--DGEVHSVPI- 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
D+ + C DYT+ AD+ VG +G P + +R E G++
Sbjct: 245 ----KDIAKYERNPSHHCCDYTSVFADISVGSVGAP--------DGWNSVFIRTEIGEKY 292
Query: 348 LSLVKNLLEI 357
+V++ +EI
Sbjct: 293 FDMVRDEMEI 302
>gi|410671239|ref|YP_006923610.1| F420H2-dehydrogenase 40 kDa subunit [Methanolobus psychrophilus
R15]
gi|409170367|gb|AFV24242.1| F420H2-dehydrogenase 40 kDa subunit [Methanolobus psychrophilus
R15]
Length = 342
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 115/252 (45%), Gaps = 21/252 (8%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
Q G+ +T+A +L++G V+ +V + SD D + +L PE+V G K T
Sbjct: 92 GQDGGVTSTLAKALLESGEVDCIVGIASD--DGWNTELILMTKPEDVDRTTGTKYTYDSV 149
Query: 193 LNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGL-DKFL 251
L+ L R+ GV CQV A R + ++N + + ++G C+++ + + +K L
Sbjct: 150 LSALKE-PFEKYDRIAVIGVPCQVHAARLISENVNDKIVVIIGLLCMESFYHDVMKEKIL 208
Query: 252 -KAASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYT 309
+ + E V+ +F + + + K + H ++ A + C+ C DYT
Sbjct: 209 PEIMGLKAEDVVKMDFGKGQFWNYTKDGEAHSVKIAQVAPHARN-------PCHHCCDYT 261
Query: 310 NALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPF 369
+ AD+ VG +G P + +R + G++ ++++ +EI G
Sbjct: 262 SYFADISVGSVGTP--------DGWNSVLIRTDVGEKYFDMIRDKVEIMEDPKPGLDLIK 313
Query: 370 VMETVKADDNAK 381
+ T+K D+N K
Sbjct: 314 KLTTMKHDNNKK 325
>gi|149718|gb|AAA72190.1| F420 hydrogenase beta-subunit (frhB) [Methanothermobacter
thermautotrophicus]
Length = 281
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 16/218 (7%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++E++ AR T + ++ AQ GIVT + L G++E V V + P P++
Sbjct: 3 LGTYKEIVSARSTDREIQKLAQDGGIVTGLLAYALDEGIIEGAV-VAGPGKEFWKPEPMV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVEHH-----L 226
A T +E+ AA G K T SPN+ L V G+++L + CQ +R + +
Sbjct: 62 AMTSDELKAAAGTKYTFSPNVLMLKKAVRQYGIEKLGTVAIPCQTMGIRKAQTYPFGVRF 121
Query: 227 NLEKLYVL-GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP 285
+K+ +L G C++N L F+ L+ E ++ + + ++
Sbjct: 122 VADKIKLLVGIYCMENFPYTSLQTFICEKLG-----LNMELVEKMDIGKGKFWVYTQDDV 176
Query: 286 YFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
Y LP + C C DY LAD+ G +G P
Sbjct: 177 Y-TLPLKETHGYEQAGCKICKDYVAELADVSTGSVGSP 213
>gi|20093977|ref|NP_613824.1| coenzyme F420-reducing hydrogenase subunit beta [Methanopyrus
kandleri AV19]
gi|19886939|gb|AAM01754.1| Coenzyme F420-reducing hydrogenase, beta subunit [Methanopyrus
kandleri AV19]
Length = 275
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 123/280 (43%), Gaps = 34/280 (12%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
+G + E+ R T + E Q G T + L+ VEAV+ S + P PV+
Sbjct: 1 MGEYREVYLTRATDERIREHGQDGGTTTALLAHALEEDTVEAVIA--SSTVETWKPEPVI 58
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLALVEA-AGVKRLLFCGVGCQVQALRSVEHH----LN 227
P+E++ G K +SPN++ AL EA A + G CQ+ A++ + + N
Sbjct: 59 VTDPDELIETAGSKYAISPNVS--ALNEAIASYDSVALVGTPCQITAVKKSKMYPYGLAN 116
Query: 228 LEKLYVL--GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEV 284
+ + L G C +N E L K L+ + E V + ++ V K+ D H
Sbjct: 117 VTERVKLTVGIFCTENFQYESLLKLLEDMGVDVENVERMDISHGEFIVRTKNGDVH---- 172
Query: 285 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 344
+ + L D +C C D+T AD+ VG +G P + + VR + G
Sbjct: 173 ---SVSVSKLGDYANEACNYCTDFTAEDADISVGSVGAPDGWNV--------VLVRTKEG 221
Query: 345 KEML--SLVKNLLEITPTISSGDRRPFVMETVKADDNAKM 382
+++ ++ ++LE+ I GD P ++E + D ++
Sbjct: 222 EKVFRSAVDADVLEV-KDIGEGD--PNLLERLARDKKERI 258
>gi|383320545|ref|YP_005381386.1| coenzyme F420 hydrogenase, subunit beta [Methanocella conradii
HZ254]
gi|379321915|gb|AFD00868.1| coenzyme F420 hydrogenase, subunit beta [Methanocella conradii
HZ254]
Length = 299
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 105/244 (43%), Gaps = 24/244 (9%)
Query: 115 LGVHEEL--LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
G ++E+ L A+ +K +Q G+VT + L G+++ + V + P+P +
Sbjct: 3 FGTYKEVMALKAKDSKITGVSQDGGVVTALLCYALDKGVIDGAL-VAGKGETPWLPKPTI 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSVE------HH 225
A T EE++AA G K T++P ++ + V G+++L G CQ+ A++ + H
Sbjct: 62 ATTKEEIMAAAGTKYTINPVVSVIKDAVREQGLEKLAVVGTPCQIYAVQKMRLYPVGARH 121
Query: 226 LNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP 285
+ + +G C +N + GL ++ P + + K +K +
Sbjct: 122 IPDKIALTIGIFCTENFSYAGLRTIIEDHCKVPVDSVTKMEIGGGKFKVKAAGKEV---- 177
Query: 286 YFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGK 345
+P + C+ C D T AD+ G +G P+ T R +GK
Sbjct: 178 --AIPIKETHKYEQEGCHVCSDLTAEFADISTGSIGTPEGWSTVFT--------RTTKGK 227
Query: 346 EMLS 349
++L+
Sbjct: 228 DLLA 231
>gi|15679299|ref|NP_276416.1| coenzyme F420-reducing hydrogenase subunit beta
[Methanothermobacter thermautotrophicus str. Delta H]
gi|3334465|sp|P19499.4|FRHB_METTH RecName: Full=Coenzyme F420 hydrogenase subunit beta; AltName:
Full=8-hydroxy-5-deazaflavin-reducing hydrogenase
subunit beta; Short=FRH
gi|2622404|gb|AAB85777.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 281
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 16/218 (7%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++E++ AR T + ++ AQ GIVT + L G++E V V + P P++
Sbjct: 3 LGTYKEIVSARSTDREIQKLAQDGGIVTGLLAYALDEGIIEGAV-VAGPGKEFWKPEPMV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVEHH-----L 226
A T +E+ AA G K T SPN+ L V G+++L + CQ +R + +
Sbjct: 62 AMTSDELKAAAGTKYTFSPNVLMLKKAVRQYGIEKLGTVAIPCQTMGIRKAQTYPFGVRF 121
Query: 227 NLEKLYVL-GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP 285
+K+ +L G C++N L F+ L+ E ++ + + ++
Sbjct: 122 VADKIKLLVGIYCMENFPYTSLQTFICEKLG-----LNMELVEKMDIGKGKFWVYTQDDV 176
Query: 286 YFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
Y LP + C C DY LAD+ G +G P
Sbjct: 177 Y-TLPLKETHGYEQAGCKICKDYVAELADVSTGSVGSP 213
>gi|21227071|ref|NP_632993.1| coenzyme F420 hydrogenase subunit beta [Methanosarcina mazei Go1]
gi|452209557|ref|YP_007489671.1| Coenzyme F420-dependent oxidoreductase [Methanosarcina mazei Tuc01]
gi|20905396|gb|AAM30665.1| Coenzyme F420 hydrogenase beta subunit [Methanosarcina mazei Go1]
gi|452099459|gb|AGF96399.1| Coenzyme F420-dependent oxidoreductase [Methanosarcina mazei Tuc01]
Length = 344
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 21/230 (9%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDR 165
R D + LG + ++ + + Q G VT I L TG+V+AVV V DP
Sbjct: 74 RLDEQPSSLLGDYLKITAGKAEFDIPRKQSGGAVTAILANALDTGLVDAVVTVTEDPW-T 132
Query: 166 LSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKR---LLFCGVGCQVQALRSV 222
L PR ++ E ++ G + L + +L EA K+ + GV C +QA+R +
Sbjct: 133 LKPRSMVITRSEALIGQAGSRYNWWVPLVS-SLKEAVINKKYRNIAVVGVPCVIQAVRKM 191
Query: 223 ---EHHL----NLEKLYVLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYKVH 273
+H L +VLG C +N E L K + EP V + ++
Sbjct: 192 LESDHQLVSPYKKSIRFVLGLFCTENFDYEKLVAGKLKSEYALEPMKVCRIDVKGKLEIT 251
Query: 274 LKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
L DG + +P +L D + P C C D+T +D+ G +G P
Sbjct: 252 LN--DGT-----QYVIPLTELEDTVRPGCSVCTDFTALKSDISAGSVGSP 294
>gi|52549133|gb|AAU82982.1| coenzyme F420-reducing hydrogenase subunit beta [uncultured
archaeon GZfos24D9]
Length = 374
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 26/250 (10%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPD 163
R D+L Y G ++L AR T +E AQ G+V+ + + +L+ G ++A V ++ D
Sbjct: 81 RTDNLLGYYKG---DILTARATDKAIIEKAQDGGVVSALLVFLLEHGEIDAAVVSKTSED 137
Query: 164 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE 223
P +A E++LAA G K T P+++ + G K + G+ C +Q +R V+
Sbjct: 138 --WIAEPFVATKKEDILAAAGSKYTQCPSVSGVGDAFEQGYKNVALVGLPCHIQGMRKVQ 195
Query: 224 ----HHLNLEKLYVL-GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 278
+ +K+ +L G C + L L + E V + + +
Sbjct: 196 LSKGFDVGADKVKLLIGLLCSETFDMPMLKNKLLELGTRIEDVEKFNIKKGSFIVYTKAG 255
Query: 279 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 338
++ P ++ D + +C C+D+ AD+ VG +G G S +
Sbjct: 256 KELK------TPIKNMRDCVREACDYCYDFAAEFADVSVGSIGSE--FGWST------VI 301
Query: 339 VRNERGKEML 348
R++ GKE++
Sbjct: 302 TRSDAGKELV 311
>gi|52549204|gb|AAU83053.1| uncharacterized anaerobic dehydrogenase [uncultured archaeon
GZfos26D6]
Length = 396
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 124/307 (40%), Gaps = 69/307 (22%)
Query: 112 DTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPV 171
D LGV+ +++ K G Q G+VT + I ++ + +A + VQ + V
Sbjct: 134 DEELGVYNDIIAG---KAATGGQDGGMVTALLISGIENNLFDAALVVQRAAG--YNAEYV 188
Query: 172 LARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKL 231
+ +L A+G K P ++ L AG +R+ G C+V+A+R ++ +LE+
Sbjct: 189 VGDDVAGILRARGTKYLRVPMMSKLEAALKAGKRRIAVVGTPCEVRAVRKLQQLWDLERE 248
Query: 232 Y------VLGTNCVDN--------------GTREGLDKFLKAASSEPETVLHYEFMQDYK 271
Y +LG C ++ G LDK K S+ + + E +DY
Sbjct: 249 YPGVELTILGLFCFESFDYLALKAYTKRTFGVE--LDKAEKTQISKGKYTVTAE-GKDYS 305
Query: 272 VHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMT 331
++ ++ I E C C D+ + LAD+ +G +G P G S
Sbjct: 306 CDVREMESEIRE-----------------GCSFCDDFASRLADIAIGSVGSPD--GYST- 345
Query: 332 QHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAP 391
+ VR++ GK++L D F V + AK+ + + A
Sbjct: 346 -----VIVRSKAGKKLL----------------DATEFTRAEVDKKEIAKLVKFKKRNAA 384
Query: 392 KFVGNLI 398
K +G ++
Sbjct: 385 KNIGTIL 391
>gi|423065980|ref|ZP_17054770.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Arthrospira platensis C1]
gi|406712479|gb|EKD07664.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Arthrospira platensis C1]
Length = 64
Score = 60.5 bits (145), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 393 FVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMY 452
+ ++ I +GPKGLE+AR+S+D H RNYL+V R + +K + H+P +AK+IV Y
Sbjct: 2 WAAKMMGVVIERIGPKGLEYARFSIDSHYTRNYLYVKRNYPEK-LENHVPDFAKRIVAQY 60
>gi|224370425|ref|YP_002604589.1| putative coenzyme F420 hydrogenase subunit beta
(8-hydroxy-5-deazaflavin-reducing hydrogenase subunit
beta) (FRH) [Desulfobacterium autotrophicum HRM2]
gi|223693142|gb|ACN16425.1| putative coenzyme F420 hydrogenase, beta subunit
(8-hydroxy-5-deazaflavin-reducing hydrogenase, beta
subunit) (FRH) [Desulfobacterium autotrophicum HRM2]
Length = 369
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 108/266 (40%), Gaps = 31/266 (11%)
Query: 107 KDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEM--LKTGMVEAVVCVQSDPDD 164
K DT LG + E+ AR+ V + TT A+ M L+ G+++A V SD
Sbjct: 72 KTPWPDTPLGHYREIHMARRGNKVPQGHFQNGGTTSALVMSALEQGVIDAAVLTGSD--- 128
Query: 165 RLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEH 224
L PRP L T EVL K +P + L G + L G CQ+ L ++
Sbjct: 129 GLRPRPRLVTTALEVLDCTASKYIAAPTVACLNRATGKGYQNLGIVGTPCQMTGLSTLRT 188
Query: 225 H-LNLEKL-----YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVH-LKHL 277
+ L+L +G C EG +L +P +V E + L L
Sbjct: 189 NPLDLPDFKDVTGMTIGLFCTWALETEGFLDYLLQQGIDPASVQSMEIPPPPAENVLLTL 248
Query: 278 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 337
+ ++ LP ++ + P C C D T DL VG + + P +
Sbjct: 249 EKEVKT-----LPLAEIRKRVLPGCAVCPDMTALFCDLSVG----------AFEEDPAWN 293
Query: 338 T--VRNERGKEML--SLVKNLLEITP 359
T VR+ERG+ ++ ++ LEI P
Sbjct: 294 TLIVRSERGQALVDKAIETGFLEIRP 319
>gi|304314490|ref|YP_003849637.1| F420-dependent sulfite reductase [Methanothermobacter marburgensis
str. Marburg]
gi|302587949|gb|ADL58324.1| F420-dependent sulfite reductase [Methanothermobacter marburgensis
str. Marburg]
Length = 690
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 105/242 (43%), Gaps = 41/242 (16%)
Query: 129 PVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPT 188
P+ G Q G+VT+ +L+ G ++ + V D+ P +L +T E++ G K +
Sbjct: 150 PIRG-QDGGVVTSFLKHLLEKGEIDGAIVVG---DEHWKPVSLLVQTAEDLEETSGSKYS 205
Query: 189 LSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE-------HHLNL----------EKL 231
+S L L G++R+ G+ CQ+ LR ++ H L L E
Sbjct: 206 IS-TLEALRTAGELGIERVAVVGLPCQINGLRKLQYFPYLAKHDLELGRKGKPVKLPEIR 264
Query: 232 YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPA 291
Y++G C + L K L+ E + E ++ + + L+ + +
Sbjct: 265 YLIGLFCTEKFEYGDLRKVLR------ENGIRMEDVEKFNIRRGKLEVDLGDR----RET 314
Query: 292 NDLVDV-IAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSL 350
+L+D+ I+ C SC D+ LAD+ VG G P+ G S I VR RG E+
Sbjct: 315 LNLMDIRISEGCRSCRDFDAHLADVSVGSAGSPE--GYST------IIVRTRRGAEIAGA 366
Query: 351 VK 352
V+
Sbjct: 367 VE 368
>gi|15678369|ref|NP_275484.1| coenzyme F420-reducing hydrogenase subunit beta-like protein
[Methanothermobacter thermautotrophicus str. Delta H]
gi|2621398|gb|AAB84847.1| coenzyme F420-reducing hydrogenase, beta subunit homolog
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 406
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 111 DDTYLGVHEE--LLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
DD +G +EE + ++R + GA G+++ I I +L+ G+++ + + +P+ L P
Sbjct: 75 DDMLMGNYEECYIAHSRDDELRYGASSGGMISQILIYLLEEGLIDGALVTRMNPERPLEP 134
Query: 169 RPVLARTPEEVLAAKGVKPTLSP-NLNTLALVEAAGVKRLLFCGVGCQVQALRSVE---H 224
P +ARTP E++ ++G K P N+ ++E G R G+ C + +R E
Sbjct: 135 EPFIARTPSEIIESRGSKYCPVPANVALKEILEVPG--RYAVVGLPCHIHGVRKAEVISR 192
Query: 225 HLNLEKLYVLGTNC 238
L +Y LG C
Sbjct: 193 KLRERIVYHLGIVC 206
>gi|451946109|ref|YP_007466704.1| coenzyme F420-reducing hydrogenase, beta subunit [Desulfocapsa
sulfexigens DSM 10523]
gi|451905457|gb|AGF77051.1| coenzyme F420-reducing hydrogenase, beta subunit [Desulfocapsa
sulfexigens DSM 10523]
Length = 461
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 144/357 (40%), Gaps = 41/357 (11%)
Query: 59 YPAKDH--CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLG 116
YP D C+ CG C ++ C G E L G S D ++ G
Sbjct: 58 YPVLDETTCTACGKC--------REVCP---GGQVNFEKLSQQSFG-----ISDDFSFDG 101
Query: 117 VHEELL--YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
EE+L +A + +E A GI+T +AI +L++G V+ V + D P +A
Sbjct: 102 HCEEILVGHALDSSILEKATGGGIITALAIMLLESGEVDGCVVTRMRTDKPWMGEPFIAT 161
Query: 175 TPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSV---EHHLNLEKL 231
+ EE+L + G + T+ P TL + K + G+ C LR+ + L
Sbjct: 162 SREEILTSAGSRYTVIPLNKTLHTIRQQEGKYAIV-GLPCHNHGLRNAMAQDEVLAARIK 220
Query: 232 YVLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFM------QDYKVHLKHLDGHIEE 283
++GT C GT E + + L+ + +++ ++EF Q V +
Sbjct: 221 VIIGTFC--GGTLEPVVVPELLRTKNIPLDSITNFEFRGGAWPGQMRAVFKDKPPQAVHY 278
Query: 284 VPYFCLPANDLVDVIAPS-CYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNE 342
Y N L+ + P C C+D +N AD+ VG +G + VR++
Sbjct: 279 SNYKDGAYNYLIGIYLPRRCQVCYDGSNLFADIAVGDAWTRDESGKYKYNSQSRVFVRSD 338
Query: 343 RGKEML--SLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQ----PAPKF 393
GK ++ ++ + +L++ + M T + NA + Q P P++
Sbjct: 339 LGKRIIKKAVEREVLKLNDVTQDPSYKTHRMRTQRKGLNAPLRHARWQKKGIPVPQY 395
>gi|253578782|ref|ZP_04856053.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849725|gb|EES77684.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 395
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 128/309 (41%), Gaps = 35/309 (11%)
Query: 64 HCSRCGLCDTYYIAHVK--DACAFLGDGMSRIEGLET------VVHGRGRRKDSLDDTYL 115
+C+ CGLC + +K D F + + E LE V + +G++K D +
Sbjct: 11 YCTGCGLCHSVQGTELKMIDG-GFPNVDVKKGESLEFYHSVCPVFYYKGKQKH---DIWG 66
Query: 116 GVHEELL-YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
+ + L+ Y+ K A G +T I +L+ V+A++ DPDD+ ++
Sbjct: 67 NIEKALIGYSSNKKIRFKAASGGALTEICCYLLENKKVDAIIHTTYDPDDQTKTISCVST 126
Query: 175 TPEEVLAAKGVKPTLS-PNLNTLALVEAAGVKRLLFCGVGCQVQALR---SVEHHLNLEK 230
T EEV++ G + +S P + L +V++ K+ F G C V ALR + L
Sbjct: 127 TVEEVISRCGSRYGISVPLKDILQIVQSD--KKYAFVGKPCDVMALRRYLNKNEKLTKNI 184
Query: 231 LYVLGTNCVDNGTREGLDKFLKAASSEPE---TVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
+Y+L C + D+ LK + + T+++ + DG ++ Y
Sbjct: 185 IYLLSFFCAGEPSVNAQDELLKKMGTSRQGCDTLVYRGNGWPGFTTVNTKDGRELKMEYK 244
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQY--------ITV 339
L I C C D T LAD+V + + HP + I
Sbjct: 245 VAWGQYLGRDIRYICRFCMDGTGELADIVCA-----DFWQLDNNNHPDFSEHEGRNIIIA 299
Query: 340 RNERGKEML 348
RNE GK++L
Sbjct: 300 RNELGKQLL 308
>gi|52550015|gb|AAU83864.1| coenzyme F420-reducing hydrogenase beta subunit [uncultured
archaeon GZfos34H10]
Length = 371
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 110/251 (43%), Gaps = 28/251 (11%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPD 163
R D+L Y G ++L AR T +E AQ G+V+ + + +L+ G ++A V ++ D
Sbjct: 78 RTDNLLGYYKG---DILTARATDKAIIEKAQDGGVVSALLVFLLEHGEIDAAVVSKTSED 134
Query: 164 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE 223
P +A ++LAA G K T P+++ + G K + G+ C +Q +R V+
Sbjct: 135 --WIAEPFVATKKADILAAAGSKYTQCPSVSGVGDAFEQGYKNVALVGLPCHIQGMRKVQ 192
Query: 224 HHLNLE------KLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 277
+ KL ++G C + L L ++ E V+ + + +
Sbjct: 193 LSKGFDVGADNVKL-LIGLLCSETFDMPMLKNKLLELGTQIEDVVKFNIKKGSFIVYTKA 251
Query: 278 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 337
++ P ++ D + +C C+D+ AD+ VG +G G S +
Sbjct: 252 GKELK------TPIKNMRDCVREACDYCYDFAAEFADVSVGSIGSE--FGWST------V 297
Query: 338 TVRNERGKEML 348
R++ GKE++
Sbjct: 298 ITRSDAGKELV 308
>gi|435850524|ref|YP_007312110.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanomethylovorans hollandica DSM 15978]
gi|433661154|gb|AGB48580.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanomethylovorans hollandica DSM 15978]
Length = 340
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 19/229 (8%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDR 165
R D LG + ++ A+ PV G Q G VT I + L+ GM++AVV V+ DP
Sbjct: 68 RLDPAPTEVLGQYLDIFSAKADIPVPGKQSGGAVTAILVNALEQGMIDAVVTVEEDP-WT 126
Query: 166 LSPRPVLARTPEEVLAAKGVKPT-LSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSV- 222
L P + + + ++ G + P +++L V +++ GV C VQA+R +
Sbjct: 127 LKPSSTVITSEDVLINQAGSRYNWWVPLVSSLKEAVITRKYRKVAVVGVPCVVQAVRKML 186
Query: 223 --EHHL----NLEKLYVLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYKVHL 274
+H L V+G C + E L +K ++ S EP ++ ++ ++ +
Sbjct: 187 DSDHDLLRPFRRSIRLVVGLFCTETFDYEKLVEEKLIRERSIEPLDMIRFDVKGKLEITM 246
Query: 275 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
K DG + +P D+ D + P C C D+T +DL G +G P
Sbjct: 247 K--DGSLTMIPL-----KDVDDCVRPGCRVCTDFTAIYSDLSAGSVGSP 288
>gi|304315420|ref|YP_003850567.1| F420-reducing hydrogenase, subunit beta [Methanothermobacter
marburgensis str. Marburg]
gi|302588879|gb|ADL59254.1| F420-reducing hydrogenase, subunit beta [Methanothermobacter
marburgensis str. Marburg]
Length = 281
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 16/218 (7%)
Query: 115 LGVHEELLYARKT-KPVEG-AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG ++E++ AR T + ++ AQ GIVT + L G++E V V ++ P+P++
Sbjct: 3 LGTYKEIVSARSTDREIQKLAQDGGIVTGLLAYALDEGIIEGAV-VAGPGEEFWKPQPMV 61
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVEHH-----L 226
A + +E+ AA G K T SPN+ L V G+++L + CQ +R ++ +
Sbjct: 62 AMSSDELKAAAGTKYTFSPNVMMLKKAVRQYGIEKLGTVAIPCQTMGIRKMQTYPFGVRF 121
Query: 227 NLEKLYVL-GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP 285
+K+ +L G C++N L F+ + E ++ + + ++
Sbjct: 122 LADKIKLLVGIYCMENFPYTSLQTFICEKLG-----VSMELVEKMDIGKGKFWVYTQD-D 175
Query: 286 YFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
LP + C C DY LAD+ G +G P
Sbjct: 176 VLTLPLKETHGYEQAGCKICKDYVAELADVSTGSVGSP 213
>gi|52548669|gb|AAU82518.1| coenzyme F420-reducing hydrogenase subunit beta [uncultured
archaeon GZfos18B6]
Length = 374
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 110/250 (44%), Gaps = 26/250 (10%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPD 163
R D+L Y G ++L AR T +E AQ G+V+ + + +L+ G ++A V ++ D
Sbjct: 81 RTDNLLGYYKG---DILTARATDKAIIEKAQDGGVVSALLVFLLEHGEIDAAVVSKTSED 137
Query: 164 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE 223
P +A ++LAA G K T P+++ + G K + G+ C +Q +R V+
Sbjct: 138 --WIAEPFVATKKADILAAAGSKYTQCPSVSGVGDAFEQGYKNVALVGLPCHIQGMRKVQ 195
Query: 224 ----HHLNLEKLYVL-GTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLD 278
+ +K+ +L G C + L L ++ E V + + +
Sbjct: 196 LSKGFDVGADKVKLLIGLLCSETFDMPMLKNKLLELGTQIEDVEKFNIKKGSFIVYTKAG 255
Query: 279 GHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT 338
++ P ++ D + +C C+D+ AD+ VG +G G S +
Sbjct: 256 KELK------TPIKNMRDCVREACDYCYDFAAEFADVSVGSIGSE--FGWST------VI 301
Query: 339 VRNERGKEML 348
R++ GKE++
Sbjct: 302 TRSDAGKELV 311
>gi|158521163|ref|YP_001529033.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Desulfococcus
oleovorans Hxd3]
gi|158509989|gb|ABW66956.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Desulfococcus oleovorans Hxd3]
Length = 364
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 107/253 (42%), Gaps = 37/253 (14%)
Query: 120 ELLYARKTKPVEGAQWT--GIVTTIAIEMLKTGMVE-AVVCVQSDPDDRLSPRPVLARTP 176
EL AR PV + T G VT + + + TG ++ A+V ++DP S P LA T
Sbjct: 86 ELTAARALDPVVRKKATDGGAVTAVLLHLFDTGRIDGAIVTRRTDP---FSREPHLATTR 142
Query: 177 EEVLAAKGV--------------KPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSV 222
+E++A+ G T SP++ V G+ R+ G CQ++A+R +
Sbjct: 143 DEIIASAGFFMDTSHGMKHFGHDYSTYSPSVQEFRPVLEKGLSRIALVGTPCQIEAVRKI 202
Query: 223 EHHLNL----EKLYVLGTNCVDN--GTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKH 276
E L + + LG C N T + D+ + + V ++ V+L
Sbjct: 203 E-VLGIVPSDSIKFCLGLFCSGNFSFTDKEKDQMEAVGGFQWDAVTRINIKDNFMVYLS- 260
Query: 277 LDGHIEEVPYFCLPANDLVDVIAP-SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP- 334
+G + +P D VD + +C+ C DY AD+ G +G +T+ P
Sbjct: 261 -NGKVLSIPL------DKVDFMKRFACHFCMDYAAEYADISFGGIGAKDGWTTVITRTPL 313
Query: 335 QYITVRNERGKEM 347
+ + RGK +
Sbjct: 314 GRAVMADARGKTL 326
>gi|435851521|ref|YP_007313107.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanomethylovorans hollandica DSM 15978]
gi|433662151|gb|AGB49577.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanomethylovorans hollandica DSM 15978]
Length = 386
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 122/289 (42%), Gaps = 38/289 (13%)
Query: 49 RSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLET---VVHGRGR 105
R+ I PG C+ CG C A + D+ + L +G ++ G T V + +
Sbjct: 63 RNDIIKPG-------ICTMCGAC-----ASICDSIS-LEEGQPKLTGKCTACGVCYNQCP 109
Query: 106 RKDSLDDTYLGVHEELLYARKT-KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDD 164
R + ++ +G + A+ K ++G Q G+VT + L+ G+++ + S ++
Sbjct: 110 RTITTEEGLIGCLRQAYAAKSNLKEIKG-QDGGVVTAMLAYGLEEGLIDCAIVTASSDEE 168
Query: 165 RLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQAL----- 219
P P++ART E++L + G + S ++ L G+ + F G C + A+
Sbjct: 169 PWKPVPIVARTYEDLLQSSGSIYSHSMTMDALMSAIRQGMNSIAFVGPSCNIDAVHKMQR 228
Query: 220 --RSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 277
R H +++ LG C+D+ GL +F++ + +H ++ K+
Sbjct: 229 SSRGFLHMFMRARIFKLGLFCMDSFDYGGLKQFIEGKN------MHLGDIEAMKIR---- 278
Query: 278 DGHIEEVPYFCLPANDLVDV---IAPSCYSCFDYTNALADLVVGYMGVP 323
G E DL ++ + SC C D D+ G +G P
Sbjct: 279 KGKFEVTTAAGQENFDLQELDNYRSSSCKYCTDMAAENTDISFGGVGTP 327
>gi|154150019|ref|YP_001403637.1| coenzyme F420-reducing hydrogenase subunit beta [Methanoregula
boonei 6A8]
gi|153998571|gb|ABS54994.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanoregula boonei 6A8]
Length = 308
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 104/237 (43%), Gaps = 34/237 (14%)
Query: 115 LGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVV--------------CV 158
LG ++ + AR T + ++ AQ GIVT++ L TG+++ + C+
Sbjct: 5 LGKYKSCVSARSTDKEVLKYAQDGGIVTSLFGYALDTGIIDGAIVAANKEFYAKYPSKCI 64
Query: 159 QS----DPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVG 213
Q D + P P + T E+LAA G K +SPN+ L + G+ ++ G
Sbjct: 65 QDSSNLDMIEPWRPIPAIVNTKAELLAAAGTKYNISPNIALLKEATRSFGLDKIGIVGTP 124
Query: 214 CQVQALRSVEHH------LNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEF 266
CQ+QA+R + + + +G C++N + + + ++ A+ + E+V E
Sbjct: 125 CQMQAVRKAQLYPVGMRDVGASIALAVGIFCMENFPYQSILQLVEDHAAMKLESVKKMEI 184
Query: 267 MQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
+ K + G + ++P + P C+ C DY L D+ G +G P
Sbjct: 185 GKG-KFWVYGKRGQVVQLPLKVTHKYE-----QPGCHVCLDYVANLGDISTGSVGSP 235
>gi|336476291|ref|YP_004615432.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Methanosalsum zhilinae DSM
4017]
gi|335929672|gb|AEH60213.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanosalsum zhilinae DSM 4017]
Length = 340
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 37/261 (14%)
Query: 105 RRKDSL--DDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDP 162
R KDSL ++ LG + ++ A+ + Q G VT + + L+TG+++AVV V DP
Sbjct: 69 RVKDSLIEENDLLGNYMCIMSAKSQLDIPRRQSGGAVTAMLVNALETGLIDAVVVVAEDP 128
Query: 163 DDRLSPRPVLARTPEEVLAAKGVK-----PTLSPNLNTLALVEAAGVKRLLFCGVGCQVQ 217
L P + + V++ G + P +S LN + + + + GV C Q
Sbjct: 129 -WTLKPYSAVISDSDSVVSKAGSRYNWWVPLVSA-LNDAVIRQK--YRNIAVVGVPCVAQ 184
Query: 218 ALRSV-EHHLNLEKLY------VLGTNCVDNGTREGLD--KFLKAASSEPETVLHYEFMQ 268
A+ + E L+L + ++G C E D K L+ S ++L ++ ++
Sbjct: 185 AISRIRESDLDLLMPFRDSIRLMIGLFCT-----ETFDYVKLLEEKLSREHSILPFK-VE 238
Query: 269 DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK-YTG 327
+ V K L+ +++ P ++L D + P C C D+T +D+ G +G P YT
Sbjct: 239 RFDVKGK-LEITLDDGNTITFPLSELEDCVRPGCNVCTDFTANYSDISAGSVGSPDGYT- 296
Query: 328 ISMTQHPQYITVRNERGKEML 348
+ +R E+GK++L
Sbjct: 297 --------TLIIRTEKGKKLL 309
>gi|154151235|ref|YP_001404853.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Methanoregula
boonei 6A8]
gi|153999787|gb|ABS56210.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanoregula boonei 6A8]
Length = 340
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 92/222 (41%), Gaps = 23/222 (10%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
LG H +L A+ T + Q G VT I L+ G+++AVV V DP L P +
Sbjct: 78 LGAHLDLFTAKSTFAIPHRQSGGAVTAILANALEQGLIDAVVTVTEDPWT-LKPSSAVIT 136
Query: 175 TPEEVLAAKGVKPTLSPNLNTLALVEAAGVKR----LLFCGVGCQVQALRSVEHHLN-LE 229
E ++ G + L LA ++ A + R + GV C VQA + N L
Sbjct: 137 KSEVLIREAGSRYGWWVPL--LAALKEACITRKYTKVAVIGVPCAVQAAARIRSSDNDLL 194
Query: 230 KLY------VLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI 281
+ Y V+G C + GL K K P + + + LK D H+
Sbjct: 195 RPYAKGIRLVVGLFCTETFDYAGLVHGKLEKKYHLAPHEIKKLDVKGKLDI-LKQDDSHL 253
Query: 282 EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
+P DL + I P C C D+++ ADL G +G P
Sbjct: 254 S------IPLADLEETIRPGCRICTDFSSLSADLSAGSVGSP 289
>gi|325958619|ref|YP_004290085.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Methanobacterium sp. AL-21]
gi|325330051|gb|ADZ09113.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanobacterium sp. AL-21]
Length = 426
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 10/220 (4%)
Query: 112 DTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPV 171
DT++G Y+ + G++T I I L+ G+++ + + + L P P
Sbjct: 89 DTFIG------YSTNMHIRYNSSSGGMITQILISSLELGIIDGALVTRMKKGNPLIPEPF 142
Query: 172 LARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE---HHLNL 228
+A+T EE++ A K P + L + +K++ G+ C + +R E + L
Sbjct: 143 IAKTKEEIIEASKSKYCPVPLNSALNELMTTKLKKIAVVGLPCHIHGIRKAEKINNKLRK 202
Query: 229 EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFM-QDYKVHLKHLDGHIEEVPYF 287
+ + LG C+ T G LK S E + + E+ + + +K +D E +
Sbjct: 203 KIIIHLGIFCIYTPTFNGTKLLLKKLSLNEEKIKNIEYRGKGWPGSMKIIDHKHEIIVNE 262
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTG 327
L I C C D TN LAD+ G +P+Y+
Sbjct: 263 YWKFIGLNFFIPFRCLKCCDGTNELADISFGDAWLPEYSN 302
>gi|91772648|ref|YP_565340.1| nitrite and sulphite reductase [Methanococcoides burtonii DSM 6242]
gi|91711663|gb|ABE51590.1| coenzyme F420-dependent sulfite reductase [Methanococcoides
burtonii DSM 6242]
Length = 639
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 39/259 (15%)
Query: 109 SLDDTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRL 166
SL + +G +++++ AR T P E Q G VT + G+++ V
Sbjct: 78 SLPPSLIGQYQKIVSARATDPSIAEKGQDGGAVTALLGYCFDNGLIDGAVTTAG----FT 133
Query: 167 SPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRS----- 221
P + + EE+L +G K + P + L + +K + GV CQ R
Sbjct: 134 KPDSCIVASKEELLDTQGAKYSAVPVMAALRQSKDE-LKNVAMVGVPCQTYGTRRTQFFT 192
Query: 222 ------VEHHLNLEKL------YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQD 269
+E +N EK Y +G C++N E L + +K+ + + + Y D
Sbjct: 193 GLNVHPMEVGMNGEKADIPNIPYTIGLFCMENFNYEKLSEHMKSIGIDLDKIRKYAIRLD 252
Query: 270 YKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGIS 329
+ + DG IE + D+ D + C C D + +AD+ G++G TG +
Sbjct: 253 VMI-VTTDDGEIE------ISLKDIADCVWDGCRICRDAVSKVADISAGHVG--SSTGWT 303
Query: 330 MTQHPQYITVRNERGKEML 348
+ RN++G E+L
Sbjct: 304 T------LIARNDKGLELL 316
>gi|432332065|ref|YP_007250208.1| coenzyme F420 hydrogenase, subunit beta [Methanoregula formicicum
SMSP]
gi|432138774|gb|AGB03701.1| coenzyme F420 hydrogenase, subunit beta [Methanoregula formicicum
SMSP]
Length = 308
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 104/238 (43%), Gaps = 36/238 (15%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQS------------ 160
LG ++ ++ AR T ++ AQ GIVT++ L+ G+++ + S
Sbjct: 5 LGKYKSVVSARSTDKELLKHAQDGGIVTSLFAYALEEGIIDGAIVAASKEFAAKNPSKVM 64
Query: 161 ------DPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVG 213
D + P P + T E+LAA G K +SPN+ L A G+ ++ G
Sbjct: 65 LDNSNFDMIEPWRPIPAIVNTKAELLAAAGTKYNISPNVALLKEATRAFGLDKIGIVGTP 124
Query: 214 CQVQALRSVEHH------LNLEKLYVLGTNCVDNGTREGLDKFLKA-ASSEPETVLHYEF 266
CQ+QA+R + + + +G C++N + + + ++ A+ + E+V E
Sbjct: 125 CQMQAVRKAQLYPIGFRDVGASIALAVGIFCMENFPYQSILQLVEDHAAMKLESVKKMEI 184
Query: 267 MQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
+ + V+ K G + ++P + P C+ C DY L D+ G +G P
Sbjct: 185 GKGKFWVYGKR--GQVVQLPLKVTHKYE-----QPGCHVCLDYVANLGDISTGSVGSP 235
>gi|432330628|ref|YP_007248771.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanoregula
formicicum SMSP]
gi|432137337|gb|AGB02264.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanoregula
formicicum SMSP]
Length = 340
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 102/244 (41%), Gaps = 25/244 (10%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
LG + ELL AR V AQ G VT I G+++AVV V D L P +
Sbjct: 78 LGTYLELLSARSASEVPYAQSGGAVTAILAHAFDAGLIDAVVTVSED-RFTLKPSSAIIT 136
Query: 175 TPEEVLAAKGVKPT-LSPNLNTL--ALVEAAGVKRLLFCGVGCQVQALRSVEHHLN-LEK 230
E +++ G + + P L L A+VE +R+ GV C VQAL + N L +
Sbjct: 137 KSEALISVAGSRYSWWVPLLAALKTAVVEKK-YRRIAVVGVPCAVQALGKIRTSDNDLLR 195
Query: 231 LY------VLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 284
Y V+G C ++ L ++ E + K+ ++ DG +
Sbjct: 196 PYAKAIRLVIGLFCTESFDYSSLIHTQLQVRNKIEPFQIKKLDVKGKLTIEKTDGSSTSI 255
Query: 285 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 344
P LP +L I C+SC D+T AD+ G +G P MT +RN G
Sbjct: 256 P---LP--ELEACIRKGCHSCTDFTALDADISAGSVGSPA----GMTT----FLIRNTTG 302
Query: 345 KEML 348
K +
Sbjct: 303 KAFV 306
>gi|332880884|ref|ZP_08448554.1| 4Fe-4S binding domain protein [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|357044756|ref|ZP_09106403.1| 4Fe-4S binding domain protein [Paraprevotella clara YIT 11840]
gi|332681058|gb|EGJ53985.1| 4Fe-4S binding domain protein [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|355532201|gb|EHH01587.1| 4Fe-4S binding domain protein [Paraprevotella clara YIT 11840]
Length = 419
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 17/223 (7%)
Query: 113 TYLG--VHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRP 170
TY+G +E+L Y T G+VT +L+ +++ V V ++ +P
Sbjct: 90 TYVGHSTNEDLRYHAAT--------GGMVTQFLTYLLEKKLIDGAVVVGYSEENPFEAKP 141
Query: 171 VLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSV--EHHLNL 228
+A+ EE+ +K K ++ + + +KRL G+ C +Q +R + ++ L
Sbjct: 142 FIAKNAEEIHDSKSSKYVVTSMDKVVTEILNTDLKRLAMVGLPCHIQGMRKLAEKNRLIH 201
Query: 229 EKLYVLGT-NCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKV-HLKHLDGH---IEE 283
+K+ V C N TR LD +L V + F D + +K D + I++
Sbjct: 202 DKIAVFAAIYCSVNKTRHSLDYYLYRYKVNKNDVGKFSFRDDGCMGFMKFTDKNGNTIKK 261
Query: 284 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYT 326
VPY C C D LAD+ G + + Y+
Sbjct: 262 VPYMSYWFGTHSFFANSRCSLCIDQLGELADISFGDIHIKPYS 304
>gi|91774281|ref|YP_566973.1| F420H2 dehydrogenase subunit F [Methanococcoides burtonii DSM 6242]
gi|91713296|gb|ABE53223.1| F420H2 dehydrogenase subunit F [Methanococcoides burtonii DSM 6242]
Length = 343
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 130/317 (41%), Gaps = 49/317 (15%)
Query: 63 DHCSRCGLCDTYYIAHVKDACAFLGDGMSRI---EGLETVVHGRG----------RRKDS 109
D C+ CG C ++ +GD + I + LE HG R
Sbjct: 13 DVCTACGAC----VSACPAGAITMGDKKAEIRDPDSLELYTHGAAPNVCEGCLTCSRICP 68
Query: 110 LDDTYLGVHEELLYARK---TKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRL 166
+ D Y +E R K Q G+ + IA +L+ G ++ VV + + ++
Sbjct: 69 VVDGYF--EDEFANVRSFLAAKSNIAGQDGGVTSAIARSLLRQGEIDCVVGITRN--EKW 124
Query: 167 SPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHL 226
L + E+V AKG K T L+ L + +++ GV CQ R + ++
Sbjct: 125 ETELELFTSAEDVEKAKGTKYTYDSVLSVLR-DPFSKYEKIAVIGVPCQAHGARLISENV 183
Query: 227 NLEKLYVLGTNCVDNGTREGL-DKFL-KAASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 284
N + + ++G C+++ +E + DK + + + E V+ +F + K DG V
Sbjct: 184 NDKIVLIIGLLCMESFHQEVMTDKIIPEIMGVKAEDVVKMDFGKG-KFWAYTKDGEEHSV 242
Query: 285 PYFCLPANDLVDVIAPS----CYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVR 340
P + +AP C+ C DYT+ AD+ VG +G P + +R
Sbjct: 243 P---------IAKVAPHARNPCHHCNDYTSVFADIAVGSVGTP--------DGWNSVLIR 285
Query: 341 NERGKEMLSLVKNLLEI 357
+ G++ +V++ LE
Sbjct: 286 TDAGEKYFKMVESELEF 302
>gi|452211541|ref|YP_007491655.1| Coenzyme F420 hydrogenase beta subunit (FrcB) [Methanosarcina mazei
Tuc01]
gi|452101443|gb|AGF98383.1| Coenzyme F420 hydrogenase beta subunit (FrcB) [Methanosarcina mazei
Tuc01]
Length = 133
Score = 57.0 bits (136), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 110 LDDTYLGVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
++D YLG + + AR T + ++ +Q GI TT+ + L+ G+++ + V D
Sbjct: 2 IEDPYLGKYTACVSARSTDREILKKSQDGGIATTLMVYALEQGIIDGAI-VTGKGDRPWE 60
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSVE 223
P+P +A + E++L A+G +SP ++ L + G+ R+ GV CQ+QA+R +
Sbjct: 61 PKPFVAMSREDILKARGTIYNISPQISWLKEATRSYGLDRVGVTGVCCQMQAVRKAQ 117
>gi|333910912|ref|YP_004484645.1| coenzyme F420 hydrogenase [Methanotorris igneus Kol 5]
gi|333751501|gb|AEF96580.1| Coenzyme F420 hydrogenase [Methanotorris igneus Kol 5]
Length = 366
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 110/258 (42%), Gaps = 36/258 (13%)
Query: 103 RGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDP 162
R K + +G + E+ A+ ++ AQ G VT I L G+++ + V D
Sbjct: 94 RTEEKLEIPIEEIGKYIEIFGAKSKMDIKYAQSGGAVTAILCNALDEGLIDGAIVVSED- 152
Query: 163 DDRLSPRPVLARTPEEVLAAKGVKPTLS-PNLNTLALVEAAGVKRL---LFCGVGCQVQA 218
+ P+ VLA T EE++ A G + + P L AL EA V++L G C + A
Sbjct: 153 KWTMEPKSVLATTKEELIKAAGSRYNWNVPILE--ALKEAVMVRKLEKLAIVGTPCVINA 210
Query: 219 -----------LRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFM 267
LR + + L+ +G C + L +K P + E +
Sbjct: 211 VFQILASDNDLLRPFKKAIRLK----IGLFCTETFKYSELMAKIKEMGINPWEIKKME-I 265
Query: 268 QDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTG 327
+ K+ + L+G +E+P ++ + C C D+T ++D+ G +G P+ G
Sbjct: 266 KKGKLAIDLLNGETKEIPL-----KEIEYCVRKGCSVCRDFTALVSDISAGNVGTPE--G 318
Query: 328 ISMTQHPQYITVRNERGK 345
++ + VRNE GK
Sbjct: 319 VTT------LIVRNEWGK 330
>gi|359409454|ref|ZP_09201922.1| coenzyme F420-reducing hydrogenase, beta subunit [SAR116 cluster
alpha proteobacterium HIMB100]
gi|356676207|gb|EHI48560.1| coenzyme F420-reducing hydrogenase, beta subunit [SAR116 cluster
alpha proteobacterium HIMB100]
Length = 415
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 96/239 (40%), Gaps = 17/239 (7%)
Query: 92 RIEGLETVVHGRGRRKDSLDDTYLGVHE-ELLYARKTKPVEGAQWTGIVTTIAIEMLKTG 150
R+EGL V G+ D + HE L YA A GI+T +A +L
Sbjct: 64 RLEGLPLEV---GKMAPYHDKVWGPYHEMSLAYAHNKAVRHQASTAGILTALACYLLDAD 120
Query: 151 MVEAVVCVQSDPDDRLSPR----PVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKR 206
MV+A++ V++ D +P L+RT ++VLAA G + + L + + ++G +R
Sbjct: 121 MVDAIIHVRA-ADGTSAPANFGVATLSRTAKQVLAASGSRYGPTAALIDIDRILSSG-ER 178
Query: 207 LLFCGVGCQVQALRSVEHH---LNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPE---T 260
C + ALR++ HH +N LY L C E FL S E
Sbjct: 179 FAIVAKPCDLNALRNLAHHDERVNKHILYWLTLLCGGFQPNEAFRSFLSEQSLSEEGLNA 238
Query: 261 VLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAP-SCYSCFDYTNALADLVVG 318
V + F + + DGH Y D P C C D AD+V G
Sbjct: 239 VRYRGFGCPGPTSITYKDGHEASFHYLDFWGEDESQWAMPLRCKICPDGIGEAADIVAG 297
>gi|268323352|emb|CBH36940.1| hypothetical protein, Coenzyme F420 hydrogenase/dehydrogenase, beta
subunit family [uncultured archaeon]
Length = 467
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 125/307 (40%), Gaps = 69/307 (22%)
Query: 112 DTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPV 171
D LGV+ +++ ++ Q G+VT + I ++ + +A + VQ + + V
Sbjct: 205 DEELGVYNDIIAGMTSRD---GQDGGMVTALLIAGIENNIFDAALVVQREAG--YNAEYV 259
Query: 172 LARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKL 231
+ +L+A+G K P ++ L AG +R+ G C+V+A+R ++ +LE+
Sbjct: 260 VVDDVAGILSARGTKYLRVPMMSKLEAALKAGKRRIAVVGTPCEVRAVRKLQQLWDLERE 319
Query: 232 Y------VLGTNCVDN--------------GTREGLDKFLKAASSEPETVLHYEFMQDYK 271
Y +LG C ++ G LDK K S+ + ++ E +DY
Sbjct: 320 YPGVELTILGLFCFESFDYLALKAYTKRTFGVE--LDKAEKTQISKGKYIVS-EGGKDYS 376
Query: 272 VHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMT 331
++ ++ I E C C D+ + LAD+ +G +G +
Sbjct: 377 CDVRQMEAEIRE-----------------GCAFCDDFASRLADIAIGSVG--------SS 411
Query: 332 QHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQPAP 391
+ VR++ GK++L D F V + AK+ + + A
Sbjct: 412 DGYSTVIVRSKAGKKLL----------------DAAEFTRAEVDKKEIAKLVKFKKRNAD 455
Query: 392 KFVGNLI 398
K +G ++
Sbjct: 456 KNIGTVL 462
>gi|52549383|gb|AAU83232.1| coenzyme F420-reducing hydrogenase beta subunit [uncultured
archaeon GZfos27A8]
Length = 642
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 110/270 (40%), Gaps = 44/270 (16%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
LG +E L+ AR T P +E Q G VT + + G+++ V+ D P +
Sbjct: 85 LGQYETLVAARATDPAVLEAGQDGGAVTALLSYCMDNGLIDGVIAT----GDAGKPSSRV 140
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE-------HH 225
R+ EE+L + G K + P L+ A+ +A + G+ C V +R + H
Sbjct: 141 VRSKEELLDSAGSKYSAIPVLS--AIKDAGDITNAAVVGLPCHVYGVRKTQFFPGMMSHG 198
Query: 226 L----NLEKL------YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLK 275
N EK+ YV+G C +N + L KF++ E + ++ +HL
Sbjct: 199 FEVGENGEKIKVPNIAYVIGLFCTENFNYDKLAKFMQ------EKGVDLSEVRRAAIHLD 252
Query: 276 HLDGHIEEVPYFCLPANDL--VDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQH 333
L + + NDL + C C D + L+D+ G+MG K M
Sbjct: 253 ELVVTTDSGEHG-FDLNDLWHAGCVQDGCVICRDAVSKLSDISAGFMGSGKGWTTLMG-- 309
Query: 334 PQYITVRNERGKEMLSLVK--NLLEITPTI 361
R ++G E++ + +E P I
Sbjct: 310 ------RTQKGVELIKAAEEAGYIETNPDI 333
>gi|268323845|emb|CBH37433.1| coenzyme F420-reducing hydrogenase, subunit beta related
[uncultured archaeon]
Length = 371
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 20/224 (8%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPD 163
R D+L Y G ++L AR T +E AQ G+V+ + I +L+ G ++A V ++ D
Sbjct: 78 RTDNLLGYYKG---DILTARATDKAVMEKAQDGGVVSALLIFLLEHGDIDAAVVSKTTED 134
Query: 164 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE 223
P +A +++AA G K T P+++ + G + + G+ C +Q +R V+
Sbjct: 135 --WVAEPFVATKKADIIAAAGSKYTQCPSVSGVGDALEQGYENVALVGLPCHIQGMRKVQ 192
Query: 224 HHLNLE------KLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL 277
+ KL ++G C + L L + E V + + +
Sbjct: 193 QSTGFDVGSDRVKL-LIGLLCSETFDMPMLKNKLLELGTRIEDVEKFNIKKGSFIVYTKA 251
Query: 278 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMG 321
++ P ++ D + +C C+D+ AD+ VG +G
Sbjct: 252 GKELK------TPIKNMRDCVREACDYCYDFAAEFADVSVGSIG 289
>gi|298674974|ref|YP_003726724.1| coenzyme F420 hydrogenase [Methanohalobium evestigatum Z-7303]
gi|298287962|gb|ADI73928.1| Coenzyme F420 hydrogenase [Methanohalobium evestigatum Z-7303]
Length = 386
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 128 KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKP 187
K +EG Q +VT++ L G+++ + + ++ P P++A + EE++ A+G K
Sbjct: 133 KGLEG-QDGAVVTSMLAYALDEGLIDCAIVTTTSNEEPWKPIPIVATSYEELVKARGSKY 191
Query: 188 TLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE-------HHLNLEKLYVLGTNCVD 240
S + L G++ + F G C + A+ ++ H + LG C+D
Sbjct: 192 IHSMTMEALMGAIQEGMRSIAFVGTSCNIDAVTKMQKSPYGFLHMFMRANILKLGLFCMD 251
Query: 241 NGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAP 300
+G+ +F++ + E + + M+ K + G +EV + L +D +
Sbjct: 252 TFYYDGIKEFVENHGMKLEAI---DSMKIRKGRFEFYMG--DEVRSYNL--SDFDSYRSS 304
Query: 301 SCYSCFDYTNALADLVVGYMGVP 323
SC C D + AD+ G +G P
Sbjct: 305 SCRFCTDLASENADISFGGIGSP 327
>gi|294496439|ref|YP_003542932.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta domain protein
[Methanohalophilus mahii DSM 5219]
gi|292667438|gb|ADE37287.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanohalophilus mahii DSM 5219]
Length = 333
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 100/241 (41%), Gaps = 32/241 (13%)
Query: 118 HEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPE 177
EE + A+ + G Q G V+ I + L+ G+++AVV V DP L P+ + + E
Sbjct: 79 REEYMAAKAGFEIPGKQSGGAVSAILYDSLERGIIDAVVTVTEDPW-TLKPKSSVIMSSE 137
Query: 178 EVLAAKGVKPTLSPNLNTLALVEAA---GVKRLLFCGVGCQVQALRSVEHHLNLEKL--- 231
++++ G + L AL EA K + + C +A+ + N E L
Sbjct: 138 ALISSAGSRYNWWVPL-LAALKEAVIRKKCKNIAIVALPCAARAVEKLRKSDN-ELLGPF 195
Query: 232 -----YVLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 284
YV+G C ++ E L K P + + V LK+ EE+
Sbjct: 196 AKSIKYVIGLFCTESFDYEKLMEGKLKSELQINPHDIERMDVRGKLVVKLKN-----EEI 250
Query: 285 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 344
+P D+ D I P C+ C D+ AD+ G +G P Q + VR++ G
Sbjct: 251 S---IPLKDIEDTIRPGCHICKDFDALYADIAAGSVGSP--------QGYTTLIVRSDTG 299
Query: 345 K 345
K
Sbjct: 300 K 300
>gi|294496160|ref|YP_003542653.1| F420H2 dehydrogenase subunit F [Methanohalophilus mahii DSM 5219]
gi|292667159|gb|ADE37008.1| F420H2 dehydrogenase subunit F [Methanohalophilus mahii DSM 5219]
Length = 342
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 114/255 (44%), Gaps = 22/255 (8%)
Query: 130 VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTL 189
+EG Q G T IA ++L+ G V+ V + + D+ + E++ AKG K T
Sbjct: 90 IEG-QDGGATTAIASKLLELGEVDCFVGITRN--DKWETELEVFTDSEQIKRAKGTKYTY 146
Query: 190 SPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGL-D 248
L+ L ++ GV CQ R + ++N + + ++G C+++ + + +
Sbjct: 147 DSVLSALRD-PFEKYDKIGVIGVPCQAHGARLISENVNDKIVVIIGLLCMESFYHDVMSE 205
Query: 249 KFLKAASS-EPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCF 306
K +K PE V+ ++F + + + K + H ++P A + C+ C
Sbjct: 206 KIIKEIMGLNPEDVVKFDFAKGKFWAYTKDGESHSVKIPEVGPHARN-------PCHHCC 258
Query: 307 DYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDR 366
DYT+ AD+ +G +G P + +R + G++ + ++ LEI G
Sbjct: 259 DYTSVSADISIGSVGAP--------DGWNSVLIRTDEGEKYFKMAEDELEIMDDPKPGMD 310
Query: 367 RPFVMETVKADDNAK 381
+ T+K ++N++
Sbjct: 311 LVKKLATMKHNNNSQ 325
>gi|337287125|ref|YP_004626598.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Thermodesulfatator indicus
DSM 15286]
gi|335359953|gb|AEH45634.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thermodesulfatator indicus DSM 15286]
Length = 367
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 42/213 (19%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPR---PVLARTPEEVLAAKGVK------- 186
G+VT + + + K GM++ V + R+SP P L + EEV+ A G
Sbjct: 105 GVVTALLVHLFKRGMIDGAVVAK-----RISPFKVVPSLVTSAEEVIEAAGFYHDVSAGV 159
Query: 187 -------PTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH--LNLEKLY-VLGT 236
T +P+ + +KR+ G CQ+ LR ++ E Y +LG
Sbjct: 160 QDWSEKYSTFAPSFEEMRPAMVEKLKRVAIVGTPCQIHTLRKMQFFKVAPSETFYMLLGL 219
Query: 237 NCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHL------DGHIEEVPYFCLP 290
C G F +A + E + +++ K+++K +G ++ +P
Sbjct: 220 FC------SGHFNFDEAGRKKLEEIGGFKWDDIAKINIKDALIITLQNGEVKRIPL---- 269
Query: 291 ANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
+++ D+ P+C C DY AD+ G +G P
Sbjct: 270 -DEVEDLKRPACKFCEDYAAEFADISFGGIGAP 301
>gi|11499420|ref|NP_070660.1| F420H2:quinone oxidoreductase, 39 kDa subunit [Archaeoglobus
fulgidus DSM 4304]
gi|2648713|gb|AAB89418.1| F420H2:quinone oxidoreductase, 39 kDa subunit, putative
[Archaeoglobus fulgidus DSM 4304]
Length = 379
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 28/246 (11%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
LG + E++ AR + V Q +VT L+ G++E + V D + R R V +
Sbjct: 117 LGEYIEVVAARSKRFV--GQDGAMVTEFTASALEMGIIERAIFVARDSNWRT--RVVTIK 172
Query: 175 TPEEVLAAK--GVKPTLSPNLNTL--ALVEAAGVKRLLFCGVGCQVQALRSVEHHLN-LE 229
TPE++ K G K + + L L A++++ V F G C V A+R ++ E
Sbjct: 173 TPEQLYDRKITGTKYSYADVLPALKEAVLKSEAVG---FVGTPCMVSAVRKMQQAFKKFE 229
Query: 230 KLYV-LGTNCVDNGTREGLDKFL-KAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
++ + +G C +N L KFL + A+++ + + ++ K ++ DG +P
Sbjct: 230 RVKLAIGLFCTENFYHHDLYKFLLEKANADLRNAVKTD-IKKGKFIVEMKDGSKVRIP-- 286
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
D ++I C C D+ +D+ VG +G P M VR E K++
Sbjct: 287 ---VKDFEEIIPSGCKVCQDFAAVESDVSVGSVGSPNRFSTVM--------VRTEVAKQI 335
Query: 348 LSLVKN 353
L ++
Sbjct: 336 LDYIRE 341
>gi|254443100|ref|ZP_05056576.1| Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminal
domain family protein [Verrucomicrobiae bacterium
DG1235]
gi|198257408|gb|EDY81716.1| Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminal
domain family protein [Verrucomicrobiae bacterium
DG1235]
Length = 367
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 9/190 (4%)
Query: 137 GIVTTIAIEMLKTGMVE-AVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNT 195
GIVT +L+T VE A+VC + + R +ART EE+ A+ K P L
Sbjct: 43 GIVTATLCYLLETEQVEGALVCSSDFANGEFNFRLSIARTREELFEAQSSKYFDIPVLKG 102
Query: 196 LALVEAAGVKRLLFCGVGCQVQAL--RSVEHHLNLEKL-YVLGTNCVDNGTREGLDKFLK 252
L LV+A K + G+ Q+ +L R ++ L EK+ + + C N +E +++ +
Sbjct: 103 LDLVKAFEGK-VAVVGLPSQINSLTRRMSKNKLLREKIGFRIALFCGHNSKKELIERVWE 161
Query: 253 AASSEPETVLHYEFMQDY---KVHLKHLDGHIEEVPYFCLPANDLVDVIA-PSCYSCFDY 308
+P+ + + + Q + ++ L DG ++ P+ + +++ C +C D+
Sbjct: 162 KKGIDPKKIDRFRYRQGHWRGQMELTMKDGSVQRFPFQDFSHYQNLHILSLDRCLNCHDH 221
Query: 309 TNALADLVVG 318
+DL G
Sbjct: 222 MGYYSDLSTG 231
>gi|374628017|ref|ZP_09700402.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanoplanus limicola DSM 2279]
gi|373906130|gb|EHQ34234.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanoplanus limicola DSM 2279]
Length = 338
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 34/264 (12%)
Query: 116 GVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLART 175
G + ++ AR + + G Q G V+ I ++ L+ G ++AV+ V D R P V+ +
Sbjct: 81 GEYRRIVPARSSFEITGKQSGGAVSAILLDGLERGTIDAVITVSEDGWTR-KPYSVMITS 139
Query: 176 PEEVLAAKGVKPTLS-PNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVEHHLN-LEKLY 232
E +L G + P L L V ++ G C VQA R ++ N L K +
Sbjct: 140 KEAILMKAGSRYNWHVPVLTALNEAVVGRKYSKIAIVGTPCVVQAARLMKESTNDLVKPF 199
Query: 233 ------VLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEV 284
++G C ++ E L K + EP + + ++ DG + +
Sbjct: 200 GNAIRLIIGLFCTESFDYERLMEGKLKTDMNIEPWQIRRMDVKGKLEITT---DGEVVD- 255
Query: 285 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYIT--VRNE 342
LP +L I C C D+T ++DL G +G P Y T +RN+
Sbjct: 256 ----LPLAELDGCIKEGCRICTDFTGLMSDLSAGSVG----------SEPDYTTLVIRND 301
Query: 343 RGKEMLS--LVKNLLEITPTISSG 364
G+ +S ++ LEI+ I+ G
Sbjct: 302 TGEGFVSNAVMSGKLEISGDINLG 325
>gi|297619953|ref|YP_003708058.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Methanococcus voltae A3]
gi|297378930|gb|ADI37085.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanococcus voltae A3]
Length = 363
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 117/267 (43%), Gaps = 30/267 (11%)
Query: 112 DTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPV 171
++ +G + E+ A+ K + Q G+VT + E +++ + + D + P
Sbjct: 96 ESSIGEYIEIKTAKAIKSNDSVQSGGVVTALLAEAFDEDLIDGAIVMLEDKW-TMEPESF 154
Query: 172 LARTPEEVLAAKGVKPTLSPNLNTL-ALVEAA---GVKRLLFCGVGCQVQALRSVEHHLN 227
LA + EEVL + G + S N+ L AL EA +KRL G C ++++ S+ + N
Sbjct: 155 LATSKEEVLKSSGSR--YSWNVPILEALREAVYDKKLKRLAIVGTPCVMESINSIVNSNN 212
Query: 228 -----LEKL--YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGH 280
EK + +G C + L + LK P + E + + + +G+
Sbjct: 213 DLLKPFEKAIRFKIGLFCYETMKYGPLIEMLKKEGINPWDIKKMEIGKGKFIVILD-NGN 271
Query: 281 IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVR 340
I+ +L ++ C C D+T +DL VG +G P+ G+S I +R
Sbjct: 272 IKS-----YKIKELEQIVRTGCKYCKDFTGYPSDLSVGNVGSPE--GVST------IIIR 318
Query: 341 NERGKEML--SLVKNLLEITPTISSGD 365
N GK + +++ +E+ + + D
Sbjct: 319 NNWGKGLFDKAIINRYIEVKDPVKTED 345
>gi|409393725|ref|ZP_11245022.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Pseudomonas sp. Chol1]
gi|409121716|gb|EKM97779.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Pseudomonas sp. Chol1]
Length = 416
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 92/223 (41%), Gaps = 14/223 (6%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 196
G+++ +A L+ +V+ V+ +Q+ D L ++R+ + ++A+ G + + L
Sbjct: 108 GVISALAQYCLEQKLVDGVIQIQASQTDPLENVATISRSRQNIIASSGSRYAPASPAQAL 167
Query: 197 ALVEAAGVKRLLFCGVGCQVQALRSVEHH---LNLEKLYVLGTNCVDNGTREGLDKFLKA 253
V A ++ LF G C V A+R ++ H L YV+ C + G ++ L
Sbjct: 168 KWV-AMSTEKYLFIGKPCDVAAVRQMQAHDPRLKQNIPYVVSFMCAGTPSLHGTEQVLDQ 226
Query: 254 ASSEPETVLHYEFMQD-----YKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDY 308
E E V + + D K LK +G + Y L + C C D
Sbjct: 227 LGVEREDVTSFRYRGDGWPGLTKATLK--NGDARTMTYNDSWGKVLNRHLQTRCKICPDG 284
Query: 309 TNALADLVV--GYMGVPK-YTGISMTQHPQYITVRNERGKEML 348
AD+V G+ G K Y I +R ++G+E+
Sbjct: 285 IGEFADIVCADGWEGDEKGYPSFEERDGNSLILIRTDKGRELF 327
>gi|289192762|ref|YP_003458703.1| nitrite and sulphite reductase 4Fe-4S region [Methanocaldococcus
sp. FS406-22]
gi|288939212|gb|ADC69967.1| nitrite and sulphite reductase 4Fe-4S region [Methanocaldococcus
sp. FS406-22]
Length = 619
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 113/261 (43%), Gaps = 47/261 (18%)
Query: 119 EELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEE 178
EE Y + +EG Q G+VT +L+ G ++ + V D+ P ++ + E+
Sbjct: 72 EEYYYGKSD--IEG-QDGGVVTAFLKYLLENGKIDGAIVV---GDECWKPVSLVVQNAED 125
Query: 179 VLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK-------- 230
+L A K +S L+ L G++++ G+ CQ+ LR +++ L K
Sbjct: 126 LLKAAKSKYAIS-TLDALRKAGEMGLEKVAVVGLPCQINGLRKLQYFPYLAKHDGELGKN 184
Query: 231 ---------LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI 281
Y++G C + + + + L + E V ++ + L +++G
Sbjct: 185 GKPAKLPKIEYLIGLFCTEKFRYDNMKEVLAKHGIDIEKVDKFDIKKGK--LLVYINGEK 242
Query: 282 EEVPYFCLPANDLVDV-IAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVR 340
+E+ DL + I P C C D+ LAD+ VG +G P G S + +R
Sbjct: 243 KEI--------DLKEFEICPGCKMCRDFDAELADVSVGCVGSP--DGYST------VIIR 286
Query: 341 NERGKEMLSLVKNLLEITPTI 361
E+G+E +KN +E+ +
Sbjct: 287 TEKGEE----IKNAVELKEGV 303
>gi|448406549|ref|ZP_21573003.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Halosimplex carlsbadense 2-9-1]
gi|445677120|gb|ELZ29623.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Halosimplex carlsbadense 2-9-1]
Length = 551
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 102/250 (40%), Gaps = 43/250 (17%)
Query: 131 EGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLS 190
EGAQ G+VT++ + +L+ G ++ + DD LA TPEE + G +
Sbjct: 264 EGAQDGGLVTSVLVHLLEAGEIDGALIATESDDDPWKAEAFLATTPEECIDNAGSVYNQT 323
Query: 191 PNLNTLAL----------VEAAGVKRLLFCGVGCQVQALRSVE--------HHLNLEKL- 231
L TL L +E A L G C+++ +R++E + +
Sbjct: 324 MALGTLDLERWDHKLDVPIEEAS---LALVGTPCEIEGIRALEDFEWEYGSQEAGVRAID 380
Query: 232 YVLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI---EEVPY 286
Y + C N E L ++ ++ + + V + + D K+ + +G + E+V +
Sbjct: 381 YRIALMCTKNFNYERLMGEQLVEQRDVDLDDVGKMDVL-DGKMLVYDREGELIVDEDVEH 439
Query: 287 FCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKE 346
F D C C D+T ADL VG +G + + VR E+G +
Sbjct: 440 F-------HDAALKGCDECADFTGYCADLTVGSVG--------SSDEYSSVIVRTEQGLD 484
Query: 347 MLSLVKNLLE 356
+L K L+
Sbjct: 485 AWNLTKGDLD 494
>gi|336121461|ref|YP_004576236.1| coenzyme F420 hydrogenase [Methanothermococcus okinawensis IH1]
gi|334855982|gb|AEH06458.1| Coenzyme F420 hydrogenase., Ferredoxin--nitrite reductase
[Methanothermococcus okinawensis IH1]
Length = 626
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 135/327 (41%), Gaps = 69/327 (21%)
Query: 65 CSRCGLCDTYYIA---------HVKDACAFLGDGMS-----RIEGLETVVHGRGRRKDSL 110
C++CG+C I +KD C G+GM R+ G+ + +
Sbjct: 19 CAKCGMCVVVCIKDLLTFEGVPKLKDECLRKGNGMCYDVCPRVSS--------GKYQIKI 70
Query: 111 DDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRP 170
+ + EE YA+ +EG Q G+VT +L+ ++ + V D+ P
Sbjct: 71 RENF---KEEYYYAKSD--IEG-QDGGVVTAFLKYLLENKKIDGAIVV---GDECWKPVS 121
Query: 171 VLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK 230
++ + E++L K T+S L+ L G++++ G+ CQ+ LR +++ L K
Sbjct: 122 LVVQNAEDLLKTTKSKYTVSI-LDALKKAGEMGLEKVAVVGLPCQINGLRKLQYFPYLAK 180
Query: 231 L--------------YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKH 276
Y++G C + + + + L A E + +F L +
Sbjct: 181 YDKKECKNKKLPKIEYLIGLFCTEKFEYDNMKEVL--AKHEIDIAKVEKFDVKGGKLLAY 238
Query: 277 LDGHIEEVPYFCLPANDLVDV-IAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQ 335
++G +E DL D+ I C C D+ +AD+ VG +G P G S
Sbjct: 239 INGEKKEF--------DLKDIEINKGCKICRDFDAEIADVSVGCVGSP--DGYST----- 283
Query: 336 YITVRNERGKEMLSLVKNLLEITPTIS 362
+ +R E+G+E +KN +E+ +
Sbjct: 284 -VIIRTEKGEE----IKNAVELKEGVD 305
>gi|419955841|ref|ZP_14471962.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Pseudomonas stutzeri TS44]
gi|387967344|gb|EIK51648.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Pseudomonas stutzeri TS44]
Length = 416
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 14/227 (6%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 196
G+++ +A L+ +V+ V+ +Q+ D L ++R+ + ++A+ G + + L
Sbjct: 108 GVISALAQYCLEHKLVDGVIQIQASQTDPLENVATISRSRQNIIASSGSRYAPASPAQAL 167
Query: 197 ALVEAAGVKRLLFCGVGCQVQALRSVEHH---LNLEKLYVLGTNCVDNGTREGLDKFLKA 253
V A ++ LF G C V A+R ++ H L YV+ C + G ++ L
Sbjct: 168 KWV-AMSTEKYLFIGKPCDVAAVRQMQAHDPRLKQNIPYVVSFMCAGTPSLHGTEQVLDK 226
Query: 254 ASSEPETVLHYEFMQD-----YKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDY 308
E E V + + D K LK +G + Y L + C C D
Sbjct: 227 LGVEREDVTSFRYRGDGWPGLTKATLK--NGDARTMTYNDSWGKVLNRHLQTRCKICPDG 284
Query: 309 TNALADLVV--GYMGVPK-YTGISMTQHPQYITVRNERGKEMLSLVK 352
AD+V G+ G K Y I +R ++G+E+ K
Sbjct: 285 IGEFADIVCADGWEGDEKGYPSFEERDGNSLILIRTDKGRELFRNAK 331
>gi|147668790|ref|YP_001213608.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
[Dehalococcoides sp. BAV1]
gi|146269738|gb|ABQ16730.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Dehalococcoides sp. BAV1]
Length = 428
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 82/192 (42%), Gaps = 14/192 (7%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 196
G+ T + L+TG+++ + ++P L+P +ARTPEE+ A G K P
Sbjct: 109 GVATALLNYALETGLIDGALVSGANPSSPLTPASFIARTPEELKQAAGSK--YCPVAAAS 166
Query: 197 ALVE-AAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYV---LGTNCVDNGTREGLDKFLK 252
A+ E A R G+ C +QA+R E+ L K + LG C + G + LK
Sbjct: 167 AISEITAKPGRYAVVGLPCHIQAIRKAENQNPLLKERIVLHLGIVCSSTMSFRGTEYILK 226
Query: 253 AASSEPETV--LHYE---FMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAP-SCYSCF 306
+ LHY + D +HL+ G + +P +P C C
Sbjct: 227 QQGINKINLISLHYRTGGWPGD--MHLEMACGDTQTLPLRNYHPYHGHGFFSPRRCLMCT 284
Query: 307 DYTNALADLVVG 318
D N LAD+ +G
Sbjct: 285 DQLNELADISLG 296
>gi|337284577|ref|YP_004624051.1| Coenzyme F420 hydrogenase/dehydrogenase subunit beta [Pyrococcus
yayanosii CH1]
gi|334900511|gb|AEH24779.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit [Pyrococcus
yayanosii CH1]
Length = 275
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 108/254 (42%), Gaps = 36/254 (14%)
Query: 108 DSLDDTYLGVH------EELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSD 161
D+L + +GV+ EE+L K K G G VT + I L+ G+++ VV +
Sbjct: 5 DNLLGSVVGVYLARAKDEEIL---KRKVASG----GAVTAMLIYALEKGLIDGVVTAKRV 57
Query: 162 PDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALR 220
+ V+ART EE+L G K ++ P + A +E +K++ + CQ Q
Sbjct: 58 SG--FEGQAVVARTREEILETAGNKWSIVPFAARVKAKIEEEDLKKVAIVCLPCQAQFFG 115
Query: 221 SVEHHLNLEK------LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHL 274
+ LE Y++ C+ E +L+ + +++ + +
Sbjct: 116 QMREFPILETDFGERIRYIVSLFCMGTFAFEAFLNYLRMKYDIKAEEIKNMALKEGFLEI 175
Query: 275 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP 334
+H D ++ LP ++ + C C DYT +D+ G+ + K G ++
Sbjct: 176 QHDDSLLQ------LPLKEVYSYLQTGCLVCADYTGTWSDISAGF--IEKEKGWTV---- 223
Query: 335 QYITVRNERGKEML 348
I RN RG+E++
Sbjct: 224 --IITRNARGEELV 235
>gi|301060801|ref|ZP_07201616.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal
domain protein [delta proteobacterium NaphS2]
gi|300445198|gb|EFK09148.1| coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal
domain protein [delta proteobacterium NaphS2]
Length = 320
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 95/228 (41%), Gaps = 28/228 (12%)
Query: 134 QWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNL 193
Q G VT +A L+ G+V+A + +S D LS P + RT +V A G K T P +
Sbjct: 43 QHGGTVTALAAFALEQGLVDAWIMARSH--DSLSGVPTVCRTRAQVQACAGTKLTSVPVV 100
Query: 194 NTLALVEAAGVKRLLFCGVGCQVQALRSVE--HHLNL----EKL-YVLGTNCVDNGTREG 246
R CQ AL ++ H L EKL V+G C G G
Sbjct: 101 GGFLEAAFKDPGRFGVVATPCQCLALAKIKASDHPRLRQAAEKLALVVGLFC---GWSFG 157
Query: 247 LDKFLKAASS--EPETVLHYEF----MQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAP 300
+ +A S +P+ V + Q +V +K + + P + + + P
Sbjct: 158 HRELSRALSGRVDPDDVTGLDIPPSRHQSLEVFIKGRETSV--------PLSKVTGAVRP 209
Query: 301 SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
+C CFD T ADL VG +P G +H VR++ G+++L
Sbjct: 210 ACAYCFDMTAEPADLSVGSARLPG--GWDEARHWNQTVVRSQMGEDLL 255
>gi|147920172|ref|YP_686063.1| putative coenzyme F420 hydrogenase, beta subunit [Methanocella
arvoryzae MRE50]
gi|110621459|emb|CAJ36737.1| putative coenzyme F420 hydrogenase, beta subunit [Methanocella
arvoryzae MRE50]
Length = 332
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 87/227 (38%), Gaps = 8/227 (3%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSP-NLNT 195
G+VT + I L G++ V + D+ L P P +ART EE++ A K P N+
Sbjct: 15 GLVTQLLICALNNGLITGAVVTRMSKDNPLVPEPFIARTQEEIIEASCSKYCPVPVNMAL 74
Query: 196 LALVEAAGVKRLLFCGVGCQVQALRSVEHH-LNLEKLYVLGTNCVDNGTREGLDKFLKAA 254
LV+ + + G+ C + L+ ++ L L G C + L+
Sbjct: 75 KELVKTGSKETIAVVGLPCHIHGLQKAKYKGLFKCNLIFFGIFCGHTPSFNATQWLLRQN 134
Query: 255 SSEPETVLHYEFMQD---YKVHLKHLDGHIEEVPYFCLPANDLVD-VIAPSCYSCFDYTN 310
V E+ + + +DG + Y + P C C+D T
Sbjct: 135 GINVADVKQIEYRGKGWPGSMTVTCMDGSKVSLDYHMYWDSGFGKYFFPPRCTLCYDGTA 194
Query: 311 ALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEI 357
AD+ G +P++ + I R G +LS K ++E+
Sbjct: 195 EFADISFGDAWLPRFKNDRIGT--SVIISRTSVGDRLLSQCKGIIEL 239
>gi|307353407|ref|YP_003894458.1| coenzyme F420 hydrogenase [Methanoplanus petrolearius DSM 11571]
gi|307156640|gb|ADN36020.1| Coenzyme F420 hydrogenase [Methanoplanus petrolearius DSM 11571]
Length = 338
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 110/253 (43%), Gaps = 32/253 (12%)
Query: 111 DDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRP 170
D LG + + A+ V G Q G VT + ++G+++ V+ V +DR + P
Sbjct: 75 DKKMLGEYISIGSAKSAFEVPGRQSGGAVTALLSNAFESGLIDGVITVS---EDRWTHEP 131
Query: 171 --VLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVK----RLLFCGVGCQVQALRSVEH 224
VL + E + A+ G + + TLA ++ A +K R+ G C VQALR ++
Sbjct: 132 FSVLITSDEAITASAGSRYNWW--VPTLASLKEAVIKKKLSRIAVVGTPCAVQALRKMKE 189
Query: 225 HLN-LEKLY------VLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYKVHLK 275
N L K + ++G C + L K EP + ++ ++ +K
Sbjct: 190 SDNDLVKPFGSSIRLIIGLFCTETFDYGKLIEGKLKSELDIEPWNIKSFDVKG--RLEIK 247
Query: 276 HLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQ 335
DG ++ + +L + I P C+ C D+T +D+ G +G + + ++ +
Sbjct: 248 MNDGSVQVISL-----KELEECIRPGCFHCTDFTAVDSDISAGSVGSEEGLTTLIIRNKE 302
Query: 336 YI-----TVRNER 343
+ VRNE+
Sbjct: 303 GMGFVDSAVRNEK 315
>gi|146282838|ref|YP_001172991.1| hypothetical protein PST_2497 [Pseudomonas stutzeri A1501]
gi|145571043|gb|ABP80149.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
Length = 416
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 97/237 (40%), Gaps = 14/237 (5%)
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
YA + + G+++ +A L+ +V+ V+ +Q+ D L ++R+ + ++A+
Sbjct: 94 YATDNEIRQAGSSGGVISALAQYCLEKNLVDGVIQIQASHSDPLENVATISRSRQNIIAS 153
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH---LNLEKLYVLGTNCV 239
G + + L V A ++ LF G C V A+R ++ H L Y++ C
Sbjct: 154 SGSRYAPASPGEALKWV-AMSTEKYLFIGKPCDVAAVRQMQQHDPRLKENIPYIVSFMCA 212
Query: 240 DNGTREGLDKFLKAASSEPETVLHYEFMQD-----YKVHLKHLDGHIEEVPYFCLPANDL 294
+ +G ++ L E + V + + D K LK +G + Y L
Sbjct: 213 GTPSLQGTEQVLDKLEVERKDVTAFRYRGDGWPGLTKATLK--NGDERTMTYNDSWGKVL 270
Query: 295 VDVIAPSCYSCFDYTNALADLVV--GYMGVPK-YTGISMTQHPQYITVRNERGKEML 348
+ C C D AD+V G+ G K Y + I VR +G+E+
Sbjct: 271 NRHLQTRCKICPDGIGEFADIVCADGWEGDEKGYPSFEEREGNSLILVRTAKGRELF 327
>gi|435852351|ref|YP_007313937.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanomethylovorans hollandica DSM 15978]
gi|433662981|gb|AGB50407.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanomethylovorans hollandica DSM 15978]
Length = 343
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 96/232 (41%), Gaps = 29/232 (12%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
Q G+ + I E+L+ G ++ VV + + + VL PE+V G K T
Sbjct: 92 GQDGGVTSHILKELLRKGEIDCVVGISRN--NVWETELVLMTKPEDVDKTTGTKYTYDSV 149
Query: 193 LNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFL- 251
L L R+ GV CQ R + ++N + + ++G C+++ E + + +
Sbjct: 150 LEALKE-PFEKYNRIAVVGVPCQAHGARLISENVNDKIVLIVGLLCMESFYHETMREKIV 208
Query: 252 -KAASSEPETVLHYEF----MQDYKVHLKHLDGHIEEV-PYFCLPANDLVDVIAPSCYSC 305
+ + V+ +F +Y + I EV PY P C++C
Sbjct: 209 PEIMKLNVDDVVKMDFGKGKFWNYTKDGQEHSVKIAEVAPYARHP-----------CHNC 257
Query: 306 FDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEI 357
DYT+ AD+ VG +G P + +R + G+ +VK+ LEI
Sbjct: 258 CDYTSVFADISVGSVGTPDGWNC--------VLIRTDEGQRYFDMVKDTLEI 301
>gi|339494474|ref|YP_004714767.1| hypothetical protein PSTAB_2397 [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
gi|386021203|ref|YP_005939227.1| hypothetical protein PSTAA_2604 [Pseudomonas stutzeri DSM 4166]
gi|327481175|gb|AEA84485.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
gi|338801846|gb|AEJ05678.1| hypothetical protein PSTAB_2397 [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
Length = 416
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 97/237 (40%), Gaps = 14/237 (5%)
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
YA + + G+++ +A L+ +V+ V+ +Q+ D L ++R+ + ++A+
Sbjct: 94 YATDNEIRQAGSSGGVISALAQYCLEKNLVDGVIQIQASHTDPLENVATISRSRQNIIAS 153
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH---LNLEKLYVLGTNCV 239
G + + L V A ++ LF G C V A+R ++ H L Y++ C
Sbjct: 154 SGSRYAPASPGEALKWV-AMSTEKYLFIGKPCDVAAVRQMQQHDPRLKENIPYIVSFMCA 212
Query: 240 DNGTREGLDKFLKAASSEPETVLHYEFMQD-----YKVHLKHLDGHIEEVPYFCLPANDL 294
+ +G ++ L E + V + + D K LK +G + Y L
Sbjct: 213 GTPSLQGTEQVLDKLEVERKDVTAFRYRGDGWPGLTKATLK--NGDERTMTYNDSWGKVL 270
Query: 295 VDVIAPSCYSCFDYTNALADLVV--GYMGVPK-YTGISMTQHPQYITVRNERGKEML 348
+ C C D AD+V G+ G K Y + I VR +G+E+
Sbjct: 271 NRHLQTRCKICPDGIGEFADIVCADGWEGDEKGYPSFEEREGNSLILVRTAKGRELF 327
>gi|150401466|ref|YP_001325232.1| coenzyme F420-reducing hydrogenase subunit beta [Methanococcus
aeolicus Nankai-3]
gi|150014169|gb|ABR56620.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanococcus aeolicus Nankai-3]
Length = 282
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 94/226 (41%), Gaps = 34/226 (15%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 196
GIVT + L+ +++ V + R P+ +A T EE+L A G K T PNL+ L
Sbjct: 28 GIVTAAFVYGLENNLLDGAVVASVGEEFRAVPK--VATTVEEILEAAGTKYTTCPNLSVL 85
Query: 197 -ALVEAAGVKRLLFCGVGCQVQALR-SVEH-----HLNLEKLYVLGTNCVDNGTREGLDK 249
+ G +++ G CQ+ A R S+++ H+N + +G C++N G+
Sbjct: 86 KQAIREYGCEKVGVVGTPCQIIATRKSLKYPVGFRHMNDKIALTVGIFCMENFPYNGMKT 145
Query: 250 FLKAASSEPETVLHYEFMQDYKVHLKHLDGHI------EEVPYFCLPANDLVDVIAPSCY 303
++ H D L G E L + IA C+
Sbjct: 146 IVEE---------HCGVKMDDVAKLDIGKGKFWTYTKWGETKSIKLADTHPYEQIA--CH 194
Query: 304 SCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 349
C DYT LAD+ G +G P G S + R E+G+E L+
Sbjct: 195 VCTDYTAELADISTGSVGSPD--GWST------VFARTEKGEEFLN 232
>gi|390961312|ref|YP_006425146.1| coenzyme F420-reducing hydrogenase subunit beta [Thermococcus sp.
CL1]
gi|390519620|gb|AFL95352.1| coenzyme F420-reducing hydrogenase subunit beta [Thermococcus sp.
CL1]
Length = 276
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 25/225 (11%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 196
G VT + L+ G+++ +V S L V+ART EE+L G + ++ P +
Sbjct: 34 GAVTAMLTYALEKGLIDGIVT--SKRTKGLEGEAVVARTKEELLETAGNRWSIVPFAARI 91
Query: 197 -ALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK------LYVLGTNCVDNGTREGLDK 249
A +E +K++ + CQ Q + LE Y++ C+ E
Sbjct: 92 KAKIEEEDLKKVAVVCLPCQAQFFGQMRDFPILEADFGNRIRYIVSLFCMGTFAFEAFLN 151
Query: 250 FLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYT 309
+L+ + E + D K+ L+ H E +P + + C C DYT
Sbjct: 152 YLRVKYG-----VRAEEIVDIKLTRDFLEIH-RESGVLTIPLREAFSYLQTGCLVCSDYT 205
Query: 310 NALADLVVGYM-GVPKYTGISMTQHPQYITVRNERGKEMLSLVKN 353
+D+ G++ P +T I RN+RG+E++ +N
Sbjct: 206 GVWSDISAGFVESEPGWT---------VIITRNQRGEELVRGAEN 241
>gi|312136920|ref|YP_004004257.1| nitrite and sulfite reductase 4fe-4S region [Methanothermus
fervidus DSM 2088]
gi|311224639|gb|ADP77495.1| nitrite and sulphite reductase 4Fe-4S region [Methanothermus
fervidus DSM 2088]
Length = 629
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 100/237 (42%), Gaps = 38/237 (16%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
Q G+V+T +LK ++ + V D+ P + + P+++ + K T+S
Sbjct: 93 GQDGGVVSTFLKYLLKKRKIDGAIVVG---DELWKPTSWIIKDPDDIEKSAKSKYTVS-T 148
Query: 193 LNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKL-----------------YVLG 235
L+ L G K + G+ CQ+Q LR +++ L K Y++G
Sbjct: 149 LDALKKASEIGCKEVAVVGLPCQIQGLRKIQYFPYLAKYDGELGKDGKPTSLPKIKYLIG 208
Query: 236 TNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLV 295
C++ + + L+ + E V ++ + L +L E+P L
Sbjct: 209 LFCMEKFEHDSFYETLEKHGIDIEKVEKFDIKGNK--LLVYLKNEKHEIPLKELD----- 261
Query: 296 DVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 352
+ C C D+ + +AD+ VG +G P+ G S I +R ++G+E+ + VK
Sbjct: 262 --VCSGCKICRDFDSEMADVSVGSVGSPE--GYST------IIIRTKKGEEIKNAVK 308
>gi|379011201|ref|YP_005269013.1| F420 reducing hydrogenase subunit beta [Acetobacterium woodii DSM
1030]
gi|375301990|gb|AFA48124.1| F420 reducing hydrogenase subunit beta [Acetobacterium woodii DSM
1030]
Length = 390
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 129/309 (41%), Gaps = 34/309 (11%)
Query: 63 DHCSRCGLCDTYYIAHVKDA-CAFLGDGMSRIEGLE---TVVHGRGRRKDSLDDTYLGVH 118
++C+ CGLC + +D F + E LE + G DDT G +
Sbjct: 8 EYCTGCGLCHSVNDTRFQDEPNGFTYPVIENNEQLEFNSKICQANGTHLLKQDDTTWGHY 67
Query: 119 EELL--YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTP 176
+ Y+ T+ A G+ T +A+ + + G+V+ V+ V DPD + +++T
Sbjct: 68 FNVYSGYSTDTEIRFKAASGGMTTAVAVYLAERGLVDGVIQVGEDPDSPYGTKNFVSKTK 127
Query: 177 EEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRS-VEHHLNL-EKLY-V 233
EE+++ G + +S L L V + G K + G C + L + ++++ E +Y
Sbjct: 128 EEIVSHCGSRYIVSSPLANLQQVLSNGGKYAVI-GRPCDIVVLNNYLDNYPQFKENIYCT 186
Query: 234 LGTNCVDNGTREGLDKFLKAASSEPETV--LHYE----------FMQDYKVHLKHLDGHI 281
L C + + E K K EPE+V + Y F +D + H++++D
Sbjct: 187 LTFFCAGSPSVEASKKLAKRLEIEPESVTKIRYRGYGWPGKATVFSEDKENHMEYIDSWN 246
Query: 282 EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVG--YMGVPKYTGISMTQHPQYITV 339
+ + D+ + C C D AD+ G + + T +
Sbjct: 247 Q------ILGRDIRKI----CKLCTDGVGEAADIASGDLWNLADNKPVFNETDGVNVVFA 296
Query: 340 RNERGKEML 348
R+E+G+++L
Sbjct: 297 RSEKGRKIL 305
>gi|327400433|ref|YP_004341272.1| coenzyme F420 hydrogenase [Archaeoglobus veneficus SNP6]
gi|327315941|gb|AEA46557.1| Coenzyme F420 hydrogenase [Archaeoglobus veneficus SNP6]
Length = 331
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 31/244 (12%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
LG + E+ A+ + Q G+VT I ++ G++EA V+ D+ P +A+
Sbjct: 86 LGEYIEIFAAKSNRF--SGQDGGMVTEILASAMEMGIIEAAAVVRR--DEEWKPAAFVAK 141
Query: 175 TPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHL----NLEK 230
+ EE++ A G K + + + L + AG G C V R ++ + N +
Sbjct: 142 SVEELVQASGTKYSYA---DVLPALRKAGKVSAAIVGTPCMVSGARKLQQNFAKYRNNIR 198
Query: 231 LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPY-FCL 289
L V+G C +N E L +FL++ + V K+ +K G P
Sbjct: 199 L-VVGLFCTENFYYEDLRRFLESKGIDISRV--------EKMDIKK--GKFIVSPQGVSF 247
Query: 290 PANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 349
P ++ +++ C C D+ +D+ +G +G G S + VR+E K+++
Sbjct: 248 PVKEMDEIVPSGCKVCQDFAAVESDVSIGSVGASD--GFSA------VIVRSEVAKQIVD 299
Query: 350 LVKN 353
++
Sbjct: 300 YIRE 303
>gi|397630808|gb|EJK69921.1| hypothetical protein THAOC_08779, partial [Thalassiosira
oceanica]
Length = 66
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 30/39 (76%), Gaps = 3/39 (7%)
Query: 48 KRSKPIPPGG---TYPAKDHCSRCGLCDTYYIAHVKDAC 83
+ S+PI P G +PAKDHCSRCGLC+T Y+++V DAC
Sbjct: 28 RPSRPINPDGWPEKFPAKDHCSRCGLCETSYVSNVLDAC 66
>gi|256811073|ref|YP_003128442.1| nitrite and sulfite reductase 4Fe-4S region [Methanocaldococcus
fervens AG86]
gi|256794273|gb|ACV24942.1| nitrite and sulphite reductase 4Fe-4S region [Methanocaldococcus
fervens AG86]
Length = 620
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 139/329 (42%), Gaps = 72/329 (21%)
Query: 65 CSRCGLCDTYYIAHV---------KDACAFLGDGMS-----RIEGLETVVHGRGRRKDSL 110
C+RCG C ++ D C G+GM R+ G+ + +
Sbjct: 15 CARCGTCTIVCPNNILTFDEKPKLTDECLRKGNGMCYDVCPRVSS--------GKYQIKI 66
Query: 111 DDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRP 170
+ + +E+ Y + VEG Q G+V +L+ ++ + V D+ P
Sbjct: 67 REKF---YEKYYYGKSD--VEG-QDGGVVIAFLKYLLENKKIDGAIVV---GDECWKPVS 117
Query: 171 VLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK 230
++ + +++L + K +S L+ L G++R+ G+ CQ+ LR +++ L K
Sbjct: 118 LVVQNADDLLKSAKSKYAIS-TLDALRKAGEMGLERVAVVGLPCQINGLRKLQYFPYLAK 176
Query: 231 -----------------LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVH 273
Y++G C + E + + L + E V ++ ++D K+
Sbjct: 177 HDGELGKDGKPTKLPKIEYLIGLFCTEKFKYENMKEVLSKHGIDIEKVEKFD-IKDGKL- 234
Query: 274 LKHLDGHIEEVPYFCLPANDLVDV-IAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQ 332
L ++G +E+ DL + I P C C D+ +AD+ VG +G P+ G S
Sbjct: 235 LACINGEKKEI--------DLKEFEICPGCKICRDFDAEMADVSVGCVGSPE--GYST-- 282
Query: 333 HPQYITVRNERGKEMLSLVKNLLEITPTI 361
IT+R ++G+E +KN +E+ +
Sbjct: 283 ----ITIRTKKGEE----IKNAIELKEGV 303
>gi|168481383|gb|ACA24866.1| WffB [Shigella dysenteriae]
gi|168481398|gb|ACA24880.1| WffB [Escherichia coli]
Length = 393
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 118/299 (39%), Gaps = 30/299 (10%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 196
G++T IA+ ++ +G+V+A++ V D+ + + ++ E++L G + + S L+ +
Sbjct: 91 GVLTAIAVYLVDSGLVDAIIQVGVSVDNPIRNVTYIMKSQEDILKCAGSRYSPSSPLSVI 150
Query: 197 ALVEAAGVKRLLFCGVGCQVQALRSV---EHHLNLEKLYVLGTNCVDNGTREGLDKFLKA 253
+ G R G C + A+R++ + Y+L C + EG L+
Sbjct: 151 RSLLGNGT-RYAVIGKPCDIAAMRTLVNSRQEFQEQFPYLLSFMCAGVPSEEGTRNILER 209
Query: 254 ASSEPETVLHYEFMQDYKVHLKHL---DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTN 310
+ E ++ + + D L DG + Y L + P C C D
Sbjct: 210 WHIKHEHLISFRYRGDGWPGLTKAITDDGEEFTMTYNESWGGVLNRYLQPRCKLCADGIG 269
Query: 311 ALADLVVG---YMGVPKYTGISMTQHPQYITVRNERGKEMLSLV--KNLLEITP-TISSG 364
AD+V Y Y + R +G+++L L KN++ +TP IS
Sbjct: 270 EAADIVCADAWYSTTNGYPSFIEKEGRSLTIARTLKGRQLLDLALNKNVISLTPFNISD- 328
Query: 365 DRRPFVMETVKADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIR 423
+E ++ P Q K N+ + + L+G F YSL+ R
Sbjct: 329 ------LEKIQ----------PYQANRKQTANVRRWAVMLLGGSVPNFKGYSLNKLMFR 371
>gi|296110016|ref|YP_003616965.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[methanocaldococcus infernus ME]
gi|295434830|gb|ADG14001.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanocaldococcus infernus ME]
Length = 613
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 43/252 (17%)
Query: 119 EELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEE 178
EE YA+ +EG Q G+VTT +L+ G ++ + V D + P ++ +T E+
Sbjct: 72 EEYYYAKGD--IEG-QDGGVVTTSLKYLLEKGEIDGAIVVGRD--EYWKPVSMVVQTAED 126
Query: 179 VLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH------------- 225
++ K T+S L L G+K++ G+ CQ+ LR +++
Sbjct: 127 IVKGAKSKYTVS-TLEALRKAGELGLKKVAVVGLPCQINGLRKLQYFPYHSRHDFEIGKD 185
Query: 226 ---LNLEKL-YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI 281
+ L K+ Y +G C + + L+ + V ++ + L +L +
Sbjct: 186 GKPVKLPKIEYFIGLFCTKKFEYDNFKEVLEKYGVNIKDVEKFDIKKGK--LLVYLKNEV 243
Query: 282 EEVPYFCLPANDLVDVIAP--SCYSCFDYTNALADLVVGYMGVPK-YTGISMTQHPQYIT 338
+E+P + P C C D+T L+D+ VG +G P+ YT + + T
Sbjct: 244 KEIP---------IKEFKPLSGCKVCKDFTAELSDISVGSVGSPEGYTTVIIR------T 288
Query: 339 VRNERGKEMLSL 350
+ E+ KE L L
Sbjct: 289 KKGEKIKEALEL 300
>gi|452203057|ref|YP_007483190.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
domain-containing protein [Dehalococcoides mccartyi
DCMB5]
gi|452110116|gb|AGG05848.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
domain-containing protein [Dehalococcoides mccartyi
DCMB5]
Length = 428
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 81/192 (42%), Gaps = 14/192 (7%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 196
G+ T + L+TG+++ + ++P L+P +ARTPEE+ A G K P
Sbjct: 109 GVATALLNYALETGLIDGALVSGANPSSPLTPASFIARTPEELKQAAGSK--YCPVAAAS 166
Query: 197 ALVE-AAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYV---LGTNCVDNGTREGLDKFLK 252
A+ E A R G+ C +QA+R E+ L K + LG C + G + LK
Sbjct: 167 AISEITAKPGRYAVVGLPCHIQAIRKAENQNPLLKERIVLHLGIVCSSTMSFRGTEYILK 226
Query: 253 AASSEPETV--LHYE---FMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAP-SCYSCF 306
+ LHY + D +HL+ G +P +P C C
Sbjct: 227 QQGINKINLISLHYRTGGWPGD--MHLEMACGDTLTLPLRNYHPYHGHGFFSPRRCLMCT 284
Query: 307 DYTNALADLVVG 318
D N LAD+ +G
Sbjct: 285 DQLNELADISLG 296
>gi|73668206|ref|YP_304221.1| coenzyme F420 hydrogenase subunit beta [Methanosarcina barkeri str.
Fusaro]
gi|72395368|gb|AAZ69641.1| coenzyme F420 hydrogenase beta subunit [Methanosarcina barkeri str.
Fusaro]
Length = 344
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 92/230 (40%), Gaps = 21/230 (9%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDR 165
R + + LG + E+ + + Q G VT I L TG+V+AVV V DP
Sbjct: 74 RLEEQPSSLLGDYLEITAGKAEFDIPKKQSGGAVTAILANALDTGLVDAVVTVTEDPW-T 132
Query: 166 LSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAA---GVKRLLFCGVGCQVQALRSV 222
L P ++ E ++ G + L +L EA + + GV C VQA+R +
Sbjct: 133 LKPHSMVITKSEALVGQAGSRYNWWVPL-VYSLKEAVVNRKYRNIAVVGVPCVVQAVRKM 191
Query: 223 EHHLNL-------EKLYVLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYKVH 273
N +V+G C ++ E L K + EP V + ++
Sbjct: 192 LETDNQLVGPYKKSIRFVMGLFCTESFDYEKLIAGKLKSEYALEPMKVCRIDVKGKLEIT 251
Query: 274 LKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
L DG + +P +L D P C C D+T AD+ G +G P
Sbjct: 252 LD--DGT-----QYVIPLTELEDTTRPGCSVCTDFTALKADISAGSVGSP 294
>gi|333910174|ref|YP_004483907.1| coenzyme F420 hydrogenase [Methanotorris igneus Kol 5]
gi|333750763|gb|AEF95842.1| Coenzyme F420 hydrogenase., Selenate reductase [Methanotorris
igneus Kol 5]
Length = 534
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 29/255 (11%)
Query: 120 ELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPE 177
E++ AR T + ++ Q GI +T+ +L+ G V+ + + + P V E
Sbjct: 74 EIVIARSTIKEILKNCQDGGITSTLVYTLLEDG----VISICAGNKEEWKPDVVTVEDKE 129
Query: 178 EVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE--HHLNLEKLYVLG 235
+L G K T P L+ L + K++ G+ CQ++AL ++E + Y +G
Sbjct: 130 TLLKTLGSKYTFVPVLSKLHDEVVSKDKKIAVVGLPCQIRALHNMEKTYFRKYNVHYKIG 189
Query: 236 TNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLV 295
C N + K ++ + E V+ + + K+ DG +P + L
Sbjct: 190 ILCTHNFSYTTFKKIVEDLGLKVEDVIKVDINKG-KMIFYTKDGEKS------IPVSKLD 242
Query: 296 DVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML--SLVKN 353
D+ C+ C + + AD+ +G MG P + + +++GKE+ +L K
Sbjct: 243 DLCDECCHQCPELYSRFADINIGSMGSP--------DGWNTVIIMSKKGKELFEKALKKG 294
Query: 354 LLEI----TPTISSG 364
+EI P I G
Sbjct: 295 YIEIYDKEDPKIQKG 309
>gi|428776032|ref|YP_007167819.1| coenzyme F420 hydrogenase [Halothece sp. PCC 7418]
gi|428690311|gb|AFZ43605.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Halothece sp. PCC 7418]
Length = 474
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 137 GIVTTIAIEMLKTGMVE-AVVCVQSDPD-DRLSPRPVLARTPEEVLAAKGVKPTLSPNLN 194
G+++ I +L+TG ++ AVV Q P DR +P++A T EE+LAA ++P L
Sbjct: 121 GVISRTLIYLLETGRIDGAVVLRQGSPTPDRA--QPLIATTAEEILAAAQSVYAVTPMLT 178
Query: 195 TLALVEAAGVKRLLFCGVGCQVQALRSVE---HHLNLEKLYVLGTNCVDNGTREGLDKFL 251
L + A RL F G+ QV ALR ++ H + ++V G N + FL
Sbjct: 179 ILPEI-ATFDGRLAFVGLPEQVAALRMLQAAGHPTAQKVVFVAGPYTGTNMYLGAVRAFL 237
Query: 252 KAASSEPE---TVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDV-IAPSCYSCF 306
++ + T L + + + ++ DG + F N L+ I+ +C
Sbjct: 238 RSRGVSDQIAITKLQWRAGEWPGYLQVETADGQVFRAKKFYY--NYLIPFYISRNCQITP 295
Query: 307 DYTNALADLVVGYMGVPKY 325
D+TN L DL VG P++
Sbjct: 296 DFTNELTDLSVGDAWSPQF 314
>gi|330508801|ref|YP_004385229.1| iron-sulfur cluster/F420 dehydrogenase/hydrogenase fusion protein
[Methanosaeta concilii GP6]
gi|328929609|gb|AEB69411.1| iron-sulfur cluster/F420 dehydrogenase/hydrogenase fusion protein
[Methanosaeta concilii GP6]
Length = 474
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 37/249 (14%)
Query: 112 DTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPV 171
D LGV+ EL AR ++G Q G+VT++ L G+++A V V ++ R
Sbjct: 205 DVDLGVYSELFAART--EIQG-QDGGVVTSLLARCLDKGVIDAAVVVYQRENN--GGRAA 259
Query: 172 LARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEH------H 225
E V+ AKG K L L G +R+ G CQ++ +R +E
Sbjct: 260 AVDDIEGVIKAKGTKYVRVSALAPLIDALRGGKRRVAVVGTPCQIRVIRKLEQLDYFKDE 319
Query: 226 LNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKH------LDG 279
+++++G C ++ L K +L + K+ + LDG
Sbjct: 320 FPDAEIFLVGLFCFESFDYRRLRDHAKG-------LLGIDIEDADKIQIAKGRYIATLDG 372
Query: 280 HIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITV 339
+ + C +L + I C C D + LAD+ +G +G + + V
Sbjct: 373 ----MEHSC-SVRELENDIREGCRFCGDLVSRLADISIGSVG--------SAEGYSSVIV 419
Query: 340 RNERGKEML 348
R+E+GK++L
Sbjct: 420 RSEKGKKLL 428
>gi|441168662|ref|ZP_20969062.1| coenzyme F420-reducing hydrogenase subunit beta-like protein
[Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440615567|gb|ELQ78752.1| coenzyme F420-reducing hydrogenase subunit beta-like protein
[Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 416
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 108/262 (41%), Gaps = 20/262 (7%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKPV--EGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPD 163
R + D+ + GV EE++ PV E + G +T + ++ V AV+ + D
Sbjct: 77 RTRTPDERWTGVFEEVVAGHALDPVVYEASASGGSLTALLQTAMRVLGVTAVLSMGRDAG 136
Query: 164 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQALRSV 222
P + R P E++ L+P L L ++ R+ GV C +QA+R +
Sbjct: 137 QPWRAAPAVVRDPGELVETAQSTYQLAPYLGALRRIMTEEPDARVAMSGVACHIQAMRKL 196
Query: 223 EH------HLNLEKLYVLGTNCVDNGTR-EGLDKFLKAASSEP-ETVLHYEFMQ-DY--K 271
+ EK+ +L + TR EG ++ + P E+V+ + + +Y
Sbjct: 197 QAMDTEIGRWAREKVVLLVEPACSSSTRPEGTAAVIRERARVPVESVVRLRYREGEYPGN 256
Query: 272 VHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMT 331
+ ++ DG +V F D C SC D+ + LAD+ V G P S++
Sbjct: 257 IGIRTRDGVDHQV-QFWQAVRDFAGNKTHRCLSCGDWMSGLADVSVSD-GDPNIFAASVS 314
Query: 332 QHPQ----YITVRNERGKEMLS 349
Q + +R G E ++
Sbjct: 315 GEGQAKHGRVFIRTRAGAEAVA 336
>gi|333910914|ref|YP_004484647.1| Coenzyme F420 hydrogenase., hydrogensulfite reductase
[Methanotorris igneus Kol 5]
gi|333751503|gb|AEF96582.1| Coenzyme F420 hydrogenase., Hydrogensulfite reductase
[Methanotorris igneus Kol 5]
Length = 617
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 47/264 (17%)
Query: 119 EELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEE 178
EE Y + +EG Q G+VTT +L+ G ++ + V D+ P ++ + E+
Sbjct: 72 EEYYYGKGD--IEG-QDGGVVTTFLKYLLENGKIDGAIVV---GDECWKPVSLVVQNAED 125
Query: 179 VLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK-------- 230
+L K +S L+ L G++++ G+ CQ+ LR +++ L K
Sbjct: 126 LLKTAKSKYAVS-TLDALRKAGEMGLEKVAVVGLPCQINGLRKLQYFPYLAKHDGELGKN 184
Query: 231 ---------LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI 281
Y++G C + + + + L + E V ++ + L +++G
Sbjct: 185 GKPVKLPKIEYLIGLFCTEKFDYDNMKEVLAKHGIDIEKVEKFDIKKGK--LLVYINGEK 242
Query: 282 EEVPYFCLPANDLVDV-IAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVR 340
+E+ DL + I C C D+ +AD+ VG +G P G S + +R
Sbjct: 243 KEI--------DLKEFEICSGCKMCRDFDAEMADVSVGCVGSP--DGYST------VIIR 286
Query: 341 NERGKEMLSLVKNLLEITPTISSG 364
E+G+E +KN +E+ + G
Sbjct: 287 TEKGEE----IKNAVELKEGVDLG 306
>gi|374636587|ref|ZP_09708150.1| nitrite and sulphite reductase 4Fe-4S region [Methanotorris
formicicus Mc-S-70]
gi|373558544|gb|EHP84881.1| nitrite and sulphite reductase 4Fe-4S region [Methanotorris
formicicus Mc-S-70]
Length = 616
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 112/251 (44%), Gaps = 45/251 (17%)
Query: 130 VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTL 189
VEG Q G+VTT +L+ G ++ + V ++ P ++ + E++L K T+
Sbjct: 81 VEG-QDGGVVTTFLKYLLENGKIDGAIVV---GEECWKPVSLVVQNAEDLLKTAKSKYTV 136
Query: 190 SPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK-----------------LY 232
S L+ L G++++ G+ CQ+ LR +++ L K Y
Sbjct: 137 S-TLDALRKAGEMGLEKVAVVGLPCQINGLRKLQYFPYLSKHDGELGKNGKPVKLPKIEY 195
Query: 233 VLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAN 292
++G C++ + + + L + E V ++ + L +++G +E+
Sbjct: 196 LIGLFCMEKFDYDNMKEVLAKHGIDIEKVEKFDIKKGK--LLVYINGDKKEI-------- 245
Query: 293 DLVDV-IAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLV 351
DL + I C C D+ ++AD+ VG +G P G S + +R E+G+E +
Sbjct: 246 DLKEFEICSGCKMCRDFDASMADVSVGSVGSP--DGYST------VIIRTEKGEE----I 293
Query: 352 KNLLEITPTIS 362
KN +E+ ++
Sbjct: 294 KNAVELKEGVN 304
>gi|91774180|ref|YP_566872.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Methanococcoides burtonii DSM 6242]
gi|91713195|gb|ABE53122.1| Coenzyme F420 hydrogenase subunit beta [Methanococcoides burtonii
DSM 6242]
Length = 389
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 22/211 (10%)
Query: 124 ARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAK 183
AR P Q G+VT++ L G+++ V + D+ PV+ RT EVL +
Sbjct: 131 ARSAIPGVKGQDGGVVTSMLAYALDEGLLDCAVVTKRSKDEPWKAEPVIVRTSAEVLESA 190
Query: 184 GVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEH------HLNLE-KLYVLGT 236
G T S L L G+ + F G C + A+ ++ HL L ++ G
Sbjct: 191 GSIYTHSMTLEPLMSAIKQGMGSIGFVGPSCNIDAVHKMQTSSYGFLHLFLRARVLKFGL 250
Query: 237 NCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVH-LKHLDGHIEEVPYFCLPANDLV 295
C+D+ +G+ +F+++ M +H +K G E + + DL
Sbjct: 251 FCMDSFEHDGIKEFVESKG-----------MDLNDIHSMKIRKGLFELGTSEGMKSYDLS 299
Query: 296 DV---IAPSCYSCFDYTNALADLVVGYMGVP 323
++ SC C D + D+ G +G P
Sbjct: 300 ELDQYRCSSCKYCTDMVSENTDISFGGVGTP 330
>gi|374300218|ref|YP_005051857.1| coenzyme F420 hydrogenase [Desulfovibrio africanus str. Walvis Bay]
gi|332553154|gb|EGJ50198.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Desulfovibrio africanus str. Walvis Bay]
Length = 370
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 52/258 (20%)
Query: 115 LGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
+G L +AR P A G VT + + +L T + + + + R +PVL
Sbjct: 86 MGAVRNLTFARAKAPEVTCMASHGGAVTALLLHLLDTKQIFGAIVNRREGIHR---KPVL 142
Query: 173 ARTPEEVLAAKGVKPTLS--PNL-----NTLALVEAAG------VKRLLFCGVGCQVQAL 219
A++ +++L + G P +S P L TL++ E AG + ++ F G+ Q+ AL
Sbjct: 143 AKSAKDLLLSAGHYPAVSNGPALLGELYQTLSVRECAGSLAQGWLHKVAFVGLPDQILAL 202
Query: 220 RSVEHHLNLEKLYVLGTNCV--------DNGTREGLDKFLK---AASSEPETVLHYEFMQ 268
R N+E L ++ ++ + D + G+ + L+ A E +L + +
Sbjct: 203 R------NMETLGIIPSDAIALYVGLFCDGAYQLGITEQLRLEQAGKFNWENILRFTCAE 256
Query: 269 DYKVHLKHLDGHIEEVPYFCLPANDLVDVIA-PSCYSCFDYTNALADLVVGYMGVPKYTG 327
+ K+HL DG + P L + C +C DY+ LAD+ G G
Sbjct: 257 ELKIHLD--DGRV------VTPPEKLRKKLGMKGCSACTDYSAELADISFG--------G 300
Query: 328 ISMTQHPQYITVRNERGK 345
+ + + VR ERG+
Sbjct: 301 LGASDGWTTVVVRTERGQ 318
>gi|432602590|ref|ZP_19838834.1| hypothetical protein A1U5_02433 [Escherichia coli KTE66]
gi|431141164|gb|ELE42929.1| hypothetical protein A1U5_02433 [Escherichia coli KTE66]
Length = 399
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 110/272 (40%), Gaps = 22/272 (8%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVH--------GRG---RRKDSLDDT 113
C+ CGLC + Y + + A G R + +E V G G + DS ++
Sbjct: 12 CTGCGLCSSVYSKSI--SMALSEKGFLRPKVIEKSVLDIELPFCPGAGLYIEKHDSQNNI 69
Query: 114 YLGVHEELL--YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPV 171
G L ++ ++ G+++ I I +L+ +V+ V+ + D +D L
Sbjct: 70 LWGNINNCLVGFSSSSEVRYRGASGGVLSQIGIYLLENKLVDGVIHIGVDSNDPLKNIIK 129
Query: 172 LARTPEEVLAAKGVKPT-LSPNLNTLALVEAAGVKRLLFCGVGCQVQALR---SVEHHLN 227
+++T E++ G + + +P L ++ G K+ F G C V ALR S H
Sbjct: 130 VSKTKAEIVCNAGSRYSPAAPLEKILQIIGENGNKKYAFIGKPCDVAALRVFISNNKHYA 189
Query: 228 LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQD-YKVHLKHLDGHIEE--V 284
Y+ C + EG + L+ + E ++ + + D + K +D H E +
Sbjct: 190 NNIPYIFSFMCAGTPSIEGTYEILRKFHIKKEDLISFRYRGDGWPGVTKAVDRHFGEKKM 249
Query: 285 PYFCLPANDLVDVIAPSCYSCFDYTNALADLV 316
Y N L + C C D AD+V
Sbjct: 250 SYNESWGNILGKYLQKRCKICPDGIGEFADIV 281
>gi|452747770|ref|ZP_21947562.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Pseudomonas stutzeri NF13]
gi|452008333|gb|EME00574.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Pseudomonas stutzeri NF13]
Length = 416
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 96/237 (40%), Gaps = 14/237 (5%)
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
YA + + G+++ +A L+ +V+ V+ +Q+ D L ++R+ + V+A+
Sbjct: 94 YAADNEIRQAGSSGGVISALAQYCLENKLVDGVIQIQASQTDPLENVATISRSRQNVIAS 153
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH---LNLEKLYVLGTNCV 239
G + + L V A ++ LF G C V A+R ++ H L Y++ C
Sbjct: 154 SGSRYAPASPGEALKWV-AMSTEKYLFIGKPCDVAAVRQMQQHNPRLKENIPYIVSFMCA 212
Query: 240 DNGTREGLDKFLKAASSEPETVLHYEFMQD-----YKVHLKHLDGHIEEVPYFCLPANDL 294
+ +G ++ L + V + + D K LK +G + Y L
Sbjct: 213 GTPSLQGTEQVLDKLEVKRSDVTAFRYRGDGWPGLTKATLK--NGDERTMTYNDSWGKVL 270
Query: 295 VDVIAPSCYSCFDYTNALADLVV--GYMGVPK-YTGISMTQHPQYITVRNERGKEML 348
+ C C D AD+V G+ G K Y + I VR +G+E+
Sbjct: 271 NRHLQTRCKICPDGIGEFADIVCADGWEGDEKGYPSFEEREGNSLILVRTAKGRELF 327
>gi|392421702|ref|YP_006458306.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Pseudomonas stutzeri CCUG
29243]
gi|390983890|gb|AFM33883.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Pseudomonas stutzeri CCUG
29243]
Length = 416
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 96/237 (40%), Gaps = 14/237 (5%)
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
YA + + G+++ +A L+ +V+ V+ +Q+ D L ++R+ + V+A+
Sbjct: 94 YAADNEIRQAGSSGGVISALAQYCLENKLVDGVIQIQASQTDPLENVATISRSRQNVIAS 153
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH---LNLEKLYVLGTNCV 239
G + + L V A ++ LF G C V A+R ++ H L Y++ C
Sbjct: 154 SGSRYAPASPGEALKWV-AMSTEKYLFIGKPCDVAAVRQMQQHNPRLKENIPYIVSFMCA 212
Query: 240 DNGTREGLDKFLKAASSEPETVLHYEFMQD-----YKVHLKHLDGHIEEVPYFCLPANDL 294
+ +G ++ L + V + + D K LK +G + Y L
Sbjct: 213 GTPSLQGTEQVLDKLEVKRSDVTAFRYRGDGWPGLTKATLK--NGDERTMTYNDSWGKVL 270
Query: 295 VDVIAPSCYSCFDYTNALADLVV--GYMGVPK-YTGISMTQHPQYITVRNERGKEML 348
+ C C D AD+V G+ G K Y + I VR +G+E+
Sbjct: 271 NRHLQTRCKICPDGIGEFADIVCADGWEGDEKGYPSFEEREGNSLILVRTAKGRELF 327
>gi|395645227|ref|ZP_10433087.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanofollis liminatans DSM 4140]
gi|395441967|gb|EJG06724.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanofollis liminatans DSM 4140]
Length = 439
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 78/191 (40%), Gaps = 12/191 (6%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSP-NLNT 195
GI+T I I L+ G+++ + + + + L P P +A+T EE+L A G K P N+
Sbjct: 108 GIITEILIYALEEGLIDGALVTRMNCNKPLEPEPFIAKTREEILEAAGSKYCPVPTNVAI 167
Query: 196 LALVEAAGVKRLLFCGVGCQVQALRSVE---HHLNLEKLYVLGTNCVDNGTREGLDKFLK 252
++E G + G+ C +Q +R E L + LG C T + L
Sbjct: 168 KYILENEG--KYAVVGLPCHIQGIRKAEAMNKKLQHRIVLHLGLFCAGTKTFLATELLLH 225
Query: 253 AASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPS-----CYSCFD 307
+ P TV E+ + + + +P +D S C C D
Sbjct: 226 KMNINPLTVTKIEYRGRGWPGSMSISTSVNDAAII-IPLSDYYSPYFSSFTPWRCILCID 284
Query: 308 YTNALADLVVG 318
+T LAD+ G
Sbjct: 285 HTAELADISCG 295
>gi|20093010|ref|NP_619085.1| coenzyme F420-dependent oxidoreductase [Methanosarcina acetivorans
C2A]
gi|19918329|gb|AAM07565.1| coenzyme F420-dependent oxidoreductase [Methanosarcina acetivorans
C2A]
Length = 345
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 23/231 (9%)
Query: 106 RKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDR 165
R D + LG + E+ + V Q G VT I L TG+V+AVV V DP
Sbjct: 74 RLDEQSSSLLGDYLEITTGKAEFDVPRKQSGGAVTAILANALDTGLVDAVVTVTEDP-WT 132
Query: 166 LSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKR----LLFCGVGCQVQALRS 221
L PR ++ + E ++ G + L ++ ++ A VKR + GV C VQA+R
Sbjct: 133 LKPRSMVITSSEVLVGQAGSRYNWWVPL--VSSLKEAVVKRKYRNVAVVGVPCVVQAVRK 190
Query: 222 V---EHHL----NLEKLYVLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYKV 272
+ +H L +V+G C ++ E L K + EP V + ++
Sbjct: 191 MLESDHQLISPYKKSIRFVIGLFCTESFDYEKLIAGKLKSEYALEPMKVCRIDVKGKLEI 250
Query: 273 HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVP 323
L DG + +P +L D + P C C D+T AD+ G +G P
Sbjct: 251 TLN--DGT-----QYVIPLAELEDTVRPGCAVCTDFTALTADISAGAVGSP 294
>gi|289192883|ref|YP_003458824.1| nitrite and sulphite reductase 4Fe-4S region [Methanocaldococcus
sp. FS406-22]
gi|288939333|gb|ADC70088.1| nitrite and sulphite reductase 4Fe-4S region [Methanocaldococcus
sp. FS406-22]
Length = 621
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 135/302 (44%), Gaps = 52/302 (17%)
Query: 78 HVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTG 137
++++ C G+GM E V G+ + K L + + E+ YAR +EG Q G
Sbjct: 37 YIEEECLRKGNGMC-FEVCPRVSSGKYQIK--LRENF---KEKYYYARSD--IEG-QDGG 87
Query: 138 IVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA 197
+VT +L++G ++ + V D + P ++ + +++L K T+S L+ L
Sbjct: 88 VVTAFLKYLLESGKIDGAIVVGKD--EFWKPVSMIVLSEKDILKGSKSKYTVS-TLDALR 144
Query: 198 LVEAAGVKRLLFCGVGCQVQALRSVEHH----------------LNLEKL-YVLGTNCVD 240
G++++ G+ CQ+ LR +++ + L K+ Y++G C++
Sbjct: 145 KAGEMGLEKVAVVGLPCQINGLRKLQYFPYHAKHDPELGRDGKPVKLPKIEYLIGLFCME 204
Query: 241 NGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDV-IA 299
L + L + + V ++ + L +++G +E+ DL ++ I
Sbjct: 205 KFEYNSLKEVLSKYGIDIKDVEKFDIKKGN--LLVYVNGEKKEI--------DLKEIEIC 254
Query: 300 PSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITP 359
C C D+ LAD+ +G +G P G S I +R ++G+E +KN +E+
Sbjct: 255 SGCKMCRDFDAELADVSIGSVGSP--DGYST------IIIRTKKGEE----IKNAVELKE 302
Query: 360 TI 361
+
Sbjct: 303 GV 304
>gi|431926976|ref|YP_007240010.1| coenzyme F420-reducing hydrogenase subunit beta [Pseudomonas
stutzeri RCH2]
gi|431825263|gb|AGA86380.1| coenzyme F420-reducing hydrogenase, beta subunit [Pseudomonas
stutzeri RCH2]
Length = 416
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 14/237 (5%)
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
YA + + G+++ +A L+ +V+ V+ +Q+ D L ++R+ + ++A+
Sbjct: 94 YATDNEIRQAGSSGGVISALAQYCLENRLVDGVIQIQASQTDPLENVATISRSRQNIIAS 153
Query: 183 KGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH---LNLEKLYVLGTNCV 239
G + + L V A ++ LF G C V A+R ++ H L +++ C
Sbjct: 154 SGSRYAPASPGEALKWV-AMSTEKYLFIGKPCDVAAVRQMQQHNPRLKENIPFIVSFMCA 212
Query: 240 DNGTREGLDKFLKAASSEPETVLHYEFMQD-----YKVHLKHLDGHIEEVPYFCLPANDL 294
+ +G ++ L E V + + D K LK+ G + Y L
Sbjct: 213 GTPSLQGTEQVLDKLEVERSDVTAFRYRGDGWPGLTKATLKN--GDERTMTYNDSWGKVL 270
Query: 295 VDVIAPSCYSCFDYTNALADLVV--GYMGVPK-YTGISMTQHPQYITVRNERGKEML 348
+ C C D AD+V G+ G K Y + I VR +G+E+
Sbjct: 271 NRHLQTRCKICPDGIGEFADIVCADGWEGDEKGYPSFEEREGNSLILVRTAKGRELF 327
>gi|57234998|ref|YP_180962.1| iron-sulfur cluster-binding protein/coenzyme F420-reducing
hydrogenase, beta subunit [Dehalococcoides ethenogenes
195]
gi|57225446|gb|AAW40503.1| iron-sulfur cluster-binding protein/coenzyme F420-reducing
hydrogenase, beta subunit, putative [Dehalococcoides
ethenogenes 195]
Length = 428
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 77/190 (40%), Gaps = 10/190 (5%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 196
GI TT+ L+TG+++ + + P L+P +ART EE+ A G K P
Sbjct: 109 GIATTLLAYALETGLIDGALVSIAPPFSPLTPTGFIARTAEELKQAAGSK--YCPVAANT 166
Query: 197 ALVE-AAGVKRLLFCGVGCQVQALRSVEHH---LNLEKLYVLGTNCVDNGTREGLDKFLK 252
A+ E AA R G+ C +QA+R E L + LG C + +G + LK
Sbjct: 167 AISEIAARPGRYAVAGLPCHIQAIRKAERQNPVLQERIVLHLGIVCSSTMSFKGTEYILK 226
Query: 253 AASSEPETVLHYEFMQD---YKVHLKHLDGHIEEVPYFCLPANDLVDVIAP-SCYSCFDY 308
++V + + + L+ G +P P C C D
Sbjct: 227 KQGINKDSVTSLSYRTNGWPGNMRLETCGGTTLRLPLKAYHPYHGHGFFTPRRCLICNDQ 286
Query: 309 TNALADLVVG 318
N LAD+ +G
Sbjct: 287 LNELADISLG 296
>gi|257052402|ref|YP_003130235.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Halorhabdus utahensis DSM 12940]
gi|256691165|gb|ACV11502.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Halorhabdus utahensis DSM 12940]
Length = 498
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 100/250 (40%), Gaps = 43/250 (17%)
Query: 131 EGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLS 190
E AQ G+VT++ +L+ G ++ + +D LA +PEE + G T +
Sbjct: 211 ENAQDGGLVTSVLCHLLEAGEIDGALIATESDEDPWKAEAFLATSPEECIENAGSIYTQT 270
Query: 191 PNLNTL----------ALVEAAGVKRLLFCGVGCQVQALRSVE--------HHLNLEKL- 231
L L L+E A L G C+++ +R+++ H + +
Sbjct: 271 MALGNLDLQQWDHKIDGLIEDA---SLALVGTPCEIEGIRALQDFEWEYGSHEEGVRAID 327
Query: 232 YVLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI---EEVPY 286
Y + C N E L ++ ++ + + V + + D K+ + DG + E+V
Sbjct: 328 YAIALMCTKNFNYERLMGEQLVEQRDIDLDNVGKMDVL-DGKMMVYDRDGELIVDEDVEN 386
Query: 287 FCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKE 346
F D C C D+T ADL VG +G + + VR E G +
Sbjct: 387 F-------HDAALKGCDECADFTGYCADLTVGSVG--------SSDEYSSVIVRTEAGLD 431
Query: 347 MLSLVKNLLE 356
+L K+ L+
Sbjct: 432 AWNLTKDDLD 441
>gi|5931749|emb|CAB56640.1| F420H2-dehydrogenase 40 kDa subunit [Methanolobus tindarius]
Length = 342
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 108/251 (43%), Gaps = 21/251 (8%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
Q G+ + +A +L+TG V+ +V + D ++ PE+V G K T
Sbjct: 92 GQDGGVTSILAKALLETGTVDCIVGIARD--GAWGTELIVMTKPEDVDRTTGTKYTYDSV 149
Query: 193 LNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFL- 251
L+ L ++ GV CQ R + + N + + +LG C+++ + + + +
Sbjct: 150 LSALR-EPFEKYDKIGVIGVPCQAHGARLLFENNNDKIVVILGLLCMESFYHDVMTEKIV 208
Query: 252 -KAASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYT 309
+ E V+ +F + + + K + H ++P A + C++C DYT
Sbjct: 209 PEVMGLNLEDVVKMDFGKGKFWNYTKDGEAHSVKIPEVAHYARN-------PCHNCCDYT 261
Query: 310 NALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPF 369
+ AD+ +G +G P + +R + GK+M L+K+ +EI G
Sbjct: 262 SVSADISLGSVGTP--------DGWNCVLIRTDVGKKMFELIKDKVEIMEDPKPGMDLIK 313
Query: 370 VMETVKADDNA 380
+ +K D+N+
Sbjct: 314 KLAKMKHDNNS 324
>gi|410720758|ref|ZP_11360111.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanobacterium
sp. Maddingley MBC34]
gi|410600469|gb|EKQ54997.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanobacterium
sp. Maddingley MBC34]
Length = 370
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 22/167 (13%)
Query: 205 KRLLFCGVGCQVQALRSVEHHLNL----EKLYVLGTNCVDNGTREGLDKFLKAASSEPET 260
K + G C + A +EH+ + + LG C++N + L +FLK E +
Sbjct: 7 KSVTLVGTPCHIIAAEKMEHYPEILGDSPVDFKLGLFCMENFSHTYLKEFLKQNDIEMDD 66
Query: 261 VLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYM 320
+ ++V HL +++ F +P + + +C C DYT+ LADL VG +
Sbjct: 67 I------DQFRVEKGHLWTYLKNGDVFKVPLSQAKICMRKNCQVCMDYTSELADLSVGSV 120
Query: 321 GV-PKYTGISMTQHPQYITVRNERGKEMLSLVKN--LLEITPTISSG 364
G P ++ I +R E+G + LS +N +E P G
Sbjct: 121 GSDPGWST---------IIIRTEKGLKALSKAENEGYIETKPITQQG 158
>gi|304314405|ref|YP_003849552.1| F420-dependent glutamate synthase [Methanothermobacter marburgensis
str. Marburg]
gi|302587864|gb|ADL58239.1| F420-dependent glutamate synthase [Methanothermobacter marburgensis
str. Marburg]
Length = 351
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
LG + E+L AR P+ Q G+VT + L+ G+V+ + V DP P PVLA
Sbjct: 270 LGEYTEILSARA--PMFRGQDGGVVTALLTYALREGIVDGALVVDRDPAMPWKPVPVLAE 327
Query: 175 TPEEVLAAKGVKPTLSPNLNTL 196
PE+V+ A G K ++ P L L
Sbjct: 328 DPEDVVRAAGTKYSVCPILKVL 349
>gi|374635603|ref|ZP_09707198.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanotorris formicicus Mc-S-70]
gi|373561669|gb|EHP87898.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanotorris formicicus Mc-S-70]
Length = 356
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 102/246 (41%), Gaps = 36/246 (14%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
+G + E+ A+ ++ AQ G VT I L G+++ + V D + P+ VL
Sbjct: 96 IGKYIEIFGAKSKMDIKYAQSGGAVTAILCNALDEGLIDGAIVVSED-RWTMEPKSVLVT 154
Query: 175 TPEEVLAAKGVKPTLS-PNLNTLALVEAAGVKRL---LFCGVGCQVQA-----------L 219
T EE++ G + + P L AL EA VK+L G C + A L
Sbjct: 155 TKEELIKVAGSRYNWNVPILE--ALKEAVMVKKLEKLAIVGTPCVINAVFQILASDNDLL 212
Query: 220 RSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDG 279
+ + + L+ +G C + L +K P + E + K+ + L+G
Sbjct: 213 KPFKKAIRLK----IGLFCTETFKYSELTAKIKDMGINPWEIKKMEIRKG-KLAIDLLNG 267
Query: 280 HIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITV 339
+E+ ++ I C C D+T +D+ G +G P+ G++ + V
Sbjct: 268 ETKEISL-----KEIEHCIRKGCSICRDFTALASDISAGNVGTPE--GVTT------LIV 314
Query: 340 RNERGK 345
RNE GK
Sbjct: 315 RNEWGK 320
>gi|298676011|ref|YP_003727761.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
domain-containing protein [Methanohalobium evestigatum
Z-7303]
gi|298288999|gb|ADI74965.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanohalobium evestigatum Z-7303]
Length = 341
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 16/208 (7%)
Query: 119 EELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEE 178
++ AR + P Q G+ + I +L G ++ VV + + + VL P +
Sbjct: 80 KQFFGARSSIP---GQDGGVTSAILKSLLDKGEIDCVVGITRN--ENWETELVLMTEPSQ 134
Query: 179 VLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNC 238
V G K T ++ L R+ GV CQ R + ++N + ++G C
Sbjct: 135 VDQTAGTKYTYDSVISALR-EPFKDYDRIAVVGVPCQAHGARLIFENINDKIAVIIGLFC 193
Query: 239 VDNGTREGL--DKFLKAASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPANDLV 295
+++ E + D K + E V+ +F + + + K +GH ++P A +
Sbjct: 194 MESFHHETMLNDIIPKVLGLDIEQVVKMDFAKGKFWAYTKDGEGHSVKIPTVAEYARN-- 251
Query: 296 DVIAPSCYSCFDYTNALADLVVGYMGVP 323
C++C DYT AD+ +G +G P
Sbjct: 252 -----PCHNCCDYTAVHADISIGSVGAP 274
>gi|15669061|ref|NP_247865.1| coenzyme F420-reducing hydrogenase subunit beta [Methanocaldococcus
jannaschii DSM 2661]
gi|2496134|sp|Q58280.1|Y870_METJA RecName: Full=Uncharacterized protein MJ0870
gi|1591554|gb|AAB98876.1| coenzyme F420-reducing hydrogenase, beta subunit (frhB)
[Methanocaldococcus jannaschii DSM 2661]
Length = 620
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 47/263 (17%)
Query: 118 HEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPE 177
+E+ YA+ +EG Q G+VT +L+ G ++ + V D+ P ++ + E
Sbjct: 71 YEKYYYAKSD--IEG-QDGGVVTAFLKYLLENGKIDGAIVV---GDECWKPVSLVVQNAE 124
Query: 178 EVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE-------HHLNLEK 230
++L K +S L+ L G++++ G+ CQ+ LR ++ H L L +
Sbjct: 125 DLLKTAKSKYAIS-TLDALRKAGEMGLEKVAVVGLPCQINGLRKLQYFPYHAKHDLELGR 183
Query: 231 ----------LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGH 280
Y++G C + + + + L + E V ++ + L +++G
Sbjct: 184 NGKPVKLPKIEYLIGLFCTEKFRYDNMKEVLSKHGIDIEKVEKFDIKKGK--LLVYVNGE 241
Query: 281 IEEVPYFCLPANDLVDV-IAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITV 339
+E DL + I C C D+ +AD+ VG +G P G S I +
Sbjct: 242 KKEF--------DLKEFEICSGCKMCRDFDAEMADVSVGCVGSP--DGYST------III 285
Query: 340 RNERGKEMLSLVKNLLEITPTIS 362
R E+G+E +KN +E+ ++
Sbjct: 286 RTEKGEE----IKNAVELKEGVN 304
>gi|147677827|ref|YP_001212042.1| coenzyme F420-reducing hydrogenase, beta subunit [Pelotomaculum
thermopropionicum SI]
gi|146273924|dbj|BAF59673.1| coenzyme F420-reducing hydrogenase, beta subunit [Pelotomaculum
thermopropionicum SI]
Length = 404
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 111/274 (40%), Gaps = 41/274 (14%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDTYLGVHEELLYA 124
C+ CG+C A I LE + GR R ++ D LG + E L A
Sbjct: 50 CANCGICP-----------AVCPGAEVNIPVLEKFIFGRERPEEIPD---LGFYREALLA 95
Query: 125 RKTK-PVE--GAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLA 181
PV GA G+VT++ + L+ G+++ + DD LA + E++LA
Sbjct: 96 WSADLPVRKRGAS-GGLVTSVLVYALEEGIIDCALVAGFRRDDPCRTGAWLAASKEDILA 154
Query: 182 AKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEH-----HLNLEKLYVLGT 236
A K P L+ A G +R+ G+ CQ+ LR +++ + +++ G
Sbjct: 155 AAQSKYACVPVNTLLSRALAQGYRRIAAVGLPCQIHGLRKMQYLGRPASMAKSIVFMTGL 214
Query: 237 NCVDN----GTREGLDKFLKAASSEPETVLHY---EFMQDYKVHLKH-----LDGHIEEV 284
C GTR + + L + + Y ++ V LK LD H + +
Sbjct: 215 FCAAQFYFEGTRHLIVERLGLTGLDEIAAMSYRGGDWPGHLVVELKDGRRLLLDRH-QYM 273
Query: 285 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVG 318
+ +PA C C D++ LADL VG
Sbjct: 274 YHHLMPAFK-----RDRCEMCVDWSAELADLSVG 302
>gi|333910248|ref|YP_004483981.1| coenzyme F420 hydrogenase [Methanotorris igneus Kol 5]
gi|333750837|gb|AEF95916.1| Coenzyme F420 hydrogenase [Methanotorris igneus Kol 5]
Length = 258
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 79/191 (41%), Gaps = 12/191 (6%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
Q G VT + LK G+++AVV V ++ P P +A PE++L A K ++SPN
Sbjct: 12 GQDGGFVTALTTYCLKEGILDAVVVVGAN---NWKPYPFIATKPEDILKASKSKYSISPN 68
Query: 193 LNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLK 252
N L + GV CQ+ + + +G C N + + +
Sbjct: 69 -NKLLEYATENYDNVGLVGVPCQILGGNKFDLKMK------IGLFCTKNFPYDAIKNIVD 121
Query: 253 AASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFC-LPANDLVDVIAPSCYSCFDYTN 310
+ V + + + V ++ I++ +P ++ P+C C D++
Sbjct: 122 GLGIPIDRVEKMDIKKGKFIVKTSEIENLIKKKEMVKEIPIKEIEKFANPACRLCCDFSA 181
Query: 311 ALADLVVGYMG 321
AD+ VG +G
Sbjct: 182 EYADISVGSVG 192
>gi|258404555|ref|YP_003197297.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
domain-containing protein [Desulfohalobium retbaense DSM
5692]
gi|257796782|gb|ACV67719.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Desulfohalobium retbaense DSM 5692]
Length = 355
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 16/173 (9%)
Query: 172 LARTPEEVLAA--KGVKPT----LSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH 225
LARTP+++ A KG+ + + +L L V G++R+ F G CQV+ +R +E
Sbjct: 137 LARTPDQLRALDDKGLTTSQVRAAASSLEVLGSVRKTGLRRVAFMGTPCQVETVRKMEIL 196
Query: 226 L--NLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYK-VHLK-HLDGHI 281
E+LY C +G D L A + L + D + + L+ HL+ +
Sbjct: 197 AVPPAERLYCT-IGCFCDG-----DFLLGPAQQDRLEKLGFFRWNDVRHITLRDHLEFWL 250
Query: 282 EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP 334
E +P DL + +C C DY+ ADL VG G P + + P
Sbjct: 251 AEGKTRDIPMEDLDFMRRYACRLCTDYSAQFADLAVGGTGAPHGWSTVIARTP 303
>gi|224368475|ref|YP_002602638.1| coenzyme F420-reducing hydrogenase [Desulfobacterium autotrophicum
HRM2]
gi|223691191|gb|ACN14474.1| coenzyme F420-reducing hydrogenase [Desulfobacterium autotrophicum
HRM2]
Length = 371
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 88/221 (39%), Gaps = 37/221 (16%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVK---------- 186
G++T + + +TG + V ++ R P LA + EE+L A G
Sbjct: 105 GVITALLAHLFETGKINGAVVSRNMETGRT---PWLATSKEEILDAAGSHFNLSQGMETF 161
Query: 187 ----PTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK---LYVLGTNCV 239
T SP++ L + G++R+ F G CQ+ +R ++ + + LG C
Sbjct: 162 GERYSTFSPSIKALGEIRREGLERIAFVGTPCQINTIRRMQALGVVPADSIVLCLGLFCS 221
Query: 240 DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKH------LDGHIEEVPYFCLPAND 293
N T K E+ +++ K+++K G I E+P ++
Sbjct: 222 GNFT------LTKENFHALESKYQFDYHDIEKINIKENFILRLATGEIREIPI-----SE 270
Query: 294 LVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP 334
L + +C C D++ AD+ G +G +T+ P
Sbjct: 271 LDPLKRTACRYCKDFSAEFADISFGGIGADDGYTTVITRTP 311
>gi|150401725|ref|YP_001325491.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Methanococcus
aeolicus Nankai-3]
gi|150014428|gb|ABR56879.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanococcus aeolicus Nankai-3]
Length = 357
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 131/325 (40%), Gaps = 60/325 (18%)
Query: 62 KDHCSRCGLC------DTYY------IAHVKDACAFLGDGMSRIEGLETVVHGRG----- 104
KD CS CG C D Y I + D CA + +S +E +E V
Sbjct: 14 KDICSGCGACVAVCPVDNIYFKEDSPIKFICDECACI---ISPVEEIEYPVSAEFCKTTL 70
Query: 105 -------------RRKDSLDDTY---LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLK 148
R K+ + T +G + + A+ V+ AQ G+V+ I
Sbjct: 71 YDVPCGACYGACPRTKNKVIPTVKNGIGRVLQSVKAKSKIEVKEAQSGGVVSAILASAFD 130
Query: 149 TGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLS-PNLNTLA-LVEAAGVKR 206
G+++ + + D + P+ LA + EEVL + G + + P L L V +K+
Sbjct: 131 EGLIDGAIVMMEDKW-TMEPQSYLATSKEEVLKSAGSRYNWNVPILRALKDAVMVKKLKK 189
Query: 207 LLFCGVGCQVQALRSVEHHLN-LEKLYV------LGTNCVDNGTREGLDKFLKAASSEPE 259
+ G C + A+ + N L K + +G C + E + + + + P
Sbjct: 190 IAIVGTPCVMNAVHQIMASDNDLLKPFKDTIRLKIGLFCFETYNYEKMMEIFEKNNINPW 249
Query: 260 TVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGY 319
V + ++ K+ +K DG EV F L +++ D + C C D++ +ADL VG
Sbjct: 250 DVRKMD-IEKGKLLIKLRDG---EVIKFKL--DEVEDAMRAGCKVCGDFSGIVADLSVGN 303
Query: 320 MGVPKYTGISMTQHPQYITVRNERG 344
+G P + I +RN+ G
Sbjct: 304 VGAP--------SNYSTILIRNDWG 320
>gi|255599067|ref|XP_002537146.1| conserved hypothetical protein [Ricinus communis]
gi|223517335|gb|EEF25237.1| conserved hypothetical protein [Ricinus communis]
Length = 294
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 19/192 (9%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVK--PTLSPNLN 194
G+++ + +L++G V+ V +++DP D L ++R EVL G + P+ SP
Sbjct: 21 GVLSALLTYLLESGKVDFVAHIKADPADPLGNAMTISRNRAEVLGGAGSRYAPS-SPLAQ 79
Query: 195 TLALVEAAGVKRLLFCGVGCQVQALRSV--EHHLNLEKL-YVLGTNCVDNGTREGLDKFL 251
L++ G R G C + LR++ E + E++ Y+L C +R+G L
Sbjct: 80 LQQLLQMEG--RFAIVGKPCDIAGLRAIVREQLVPAERIPYMLSFMCAGIPSRKGTLAIL 137
Query: 252 KAASSEPETVLHYEF-------MQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYS 304
K P+ V + F M H DG +E+ Y L + C
Sbjct: 138 KKLDVAPQDVASFTFRGNGWPGMSTATTH----DGRKQEMDYASSWGTILNRHLQFRCKV 193
Query: 305 CFDYTNALADLV 316
C D AD+V
Sbjct: 194 CPDGIGEFADVV 205
>gi|261402870|ref|YP_003247094.1| nitrite and sulfite reductase 4Fe-4S region [Methanocaldococcus
vulcanius M7]
gi|261369863|gb|ACX72612.1| nitrite and sulphite reductase 4Fe-4S region [Methanocaldococcus
vulcanius M7]
Length = 617
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 148/370 (40%), Gaps = 77/370 (20%)
Query: 63 DHCSRCGLCDTYYIAHV---------KDACAFLGDGMSRIEGLETVVHGRGR---RKDSL 110
+ C+RCG C ++ KD C G+GM E V G+ + R++
Sbjct: 13 NMCARCGTCTVVCPNNLLTFEDRPKLKDECLRKGNGMC-FEVCPRVSSGKYQIKIRENFF 71
Query: 111 DDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRP 170
+ Y G E +EG Q G+VT +L+ G ++ + V D+ P
Sbjct: 72 EKYYYGKSE----------IEG-QDGGVVTAFLKYLLENGKIDGAIVV---GDECWKPIS 117
Query: 171 VLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK 230
+ + +++L + K +S L+ L G++++ G+ CQ+ LR +++ L K
Sbjct: 118 MAVQNADDLLKSTKSKYAVS-TLDALRKAGEMGLEKVAVVGLPCQINGLRKLQYFPYLAK 176
Query: 231 -----------------LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQ-DYKV 272
Y++G C++ + + + L+ + E V ++ + V
Sbjct: 177 HDFELGRDGKPVKLPKIEYLIGLFCMEKFKYDNMKEVLERHGIKIEDVKKFDIKKGKLIV 236
Query: 273 HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQ 332
+L++ I+ + + C C D+ +AD+ VG +G P G S
Sbjct: 237 YLENDKKEIKLEEF----------EVCSGCNICRDFDAGMADVSVGCVGSP--DGYST-- 282
Query: 333 HPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKADDNAKMGRGPSQ-PAP 391
I +R ++G+E +KN +E+ + +E + N K+ R +
Sbjct: 283 ----IIIRTKKGEE----IKNAIELKEGVD--------VEAINKLRNKKLKRFKKEVERR 326
Query: 392 KFVGNLIAFF 401
K G I+F+
Sbjct: 327 KETGEYISFY 336
>gi|298674635|ref|YP_003726385.1| nitrite and sulfite reductase [Methanohalobium evestigatum Z-7303]
gi|298287623|gb|ADI73589.1| nitrite and sulphite reductase 4Fe-4S region [Methanohalobium
evestigatum Z-7303]
Length = 623
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 131/345 (37%), Gaps = 67/345 (19%)
Query: 45 DWRKRSKPIPPGGTYPAKDHCSRCGLC---------DTYYIAHVKDACAFLGDGMSRIEG 95
+W+ + + + G C+RCG C D +KD C G GM
Sbjct: 3 EWKLKDEIVDNG-------MCARCGTCAVVCPNDLLDFKNGPVLKDECLRKGHGMC---- 51
Query: 96 LETVVH-GRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEA 154
LE G+ + S+ + + EE R Q G+VT +L +E
Sbjct: 52 LEVCPRVSSGKYQISIRENF---KEEYYAGRGNFD---GQDGGVVTAFLKYLLDNEKIEG 105
Query: 155 VVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGC 214
+ V D+ P ++ + + ++ K T+S L+ L G++ + G+ C
Sbjct: 106 AIVV---GDECWKPVSMVVKDEKGLMDTAKSKYTIS-TLDALRDAGEMGLENVAVVGLPC 161
Query: 215 QVQALRSVEHHLNLEK-----------------LYVLGTNCVDNGTREGLDKFLKAASSE 257
Q+ LR +++ L K Y++G C + + L L+ + +
Sbjct: 162 QINGLRKLQYFEYLAKHGEELGSNGKPANLPDIQYLIGLFCTEKFEYDSLKNILQKYNVD 221
Query: 258 PETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVV 317
E V ++ ++ V + ++P D +D I P C C D+ +AD+ V
Sbjct: 222 IENVEKFDILKGKLVAYSNKKNASVKIPL------DEID-ITPGCRVCRDFDANMADVSV 274
Query: 318 GYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTIS 362
G G + + VR E+G + +KN +E+ I+
Sbjct: 275 GSAG--------SSDGYSTVVVRTEKGDD----IKNAIELHDEIN 307
>gi|298675109|ref|YP_003726859.1| nitrite and sulfite reductase [Methanohalobium evestigatum Z-7303]
gi|298288097|gb|ADI74063.1| nitrite and sulphite reductase 4Fe-4S region [Methanohalobium
evestigatum Z-7303]
Length = 644
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 110/278 (39%), Gaps = 41/278 (14%)
Query: 113 TYLGVHEELLYARKTKPV--EGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRP 170
+ +G E + AR T Q G VT + G+++ V + D P
Sbjct: 82 SLIGQFERVTSARATNSTIRNKGQDGGAVTALLDYCFDNGLIDGAV----NTADFTKPSS 137
Query: 171 VLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH--LNL 228
+ EE+ ++G K + P ++ L V ++ + G+ CQV R + LN+
Sbjct: 138 RIVTNKEELQESQGSKYSALPVMSALRQVNDE-LENVAMVGLPCQVYGTRRTQFFKGLNV 196
Query: 229 EKL---------------YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVH 273
L YV+G C++N + L +L++ + + Y D +
Sbjct: 197 HPLEIGTDGEKANIPNIPYVIGLFCMENFNYDKLSGYLESIGIDLSKIKKYAIRLDEMII 256
Query: 274 LKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQH 333
+ +G++E + D+ D + C+ C D + +AD+ G++G TG +
Sbjct: 257 MTD-EGNVE------ISLKDIEDYVWDGCHICRDAVSKVADISAGHVGSS--TGWTT--- 304
Query: 334 PQYITVRNERGKEMLSLVK--NLLEITPTISSGDRRPF 369
+ RN +G E+L + LE + + D F
Sbjct: 305 ---LIARNAKGLELLEAAEKDGYLETSDKVDVEDIEDF 339
>gi|258654597|ref|YP_003203753.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Nakamurella multipartita DSM
44233]
gi|258557822|gb|ACV80764.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Nakamurella multipartita DSM 44233]
Length = 418
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 94/234 (40%), Gaps = 17/234 (7%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 196
G+V+ +A L++G V+ V++ PD L VL T + V + G + + + L
Sbjct: 106 GVVSALAAHALESGAAVGVLQVRARPDAPLLNETVLNTTSDAVFESAGSRYSPASPGERL 165
Query: 197 ALVEAAGVKRLLFCGVGCQVQALRSV---EHHLNLEKLYVLGTNCVDNGTREGLDKFLKA 253
LVE A + G C V R+ L+ + + C + +K + +
Sbjct: 166 DLVEGA-AGPCVVVGKPCDVAGTRAAAGRRTELDDKVGLTIAIFCAGTPSTRTTEKMITS 224
Query: 254 ASSEPETVLHYEFMQD-----YKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDY 308
EP++V ++ D ++V + G+ Y L C C D+
Sbjct: 225 LGVEPQSVCRLDYRGDGWPGNFRVETR--SGYRAAATYAEAWDGTLSKGRQWRCMICPDH 282
Query: 309 TNALADLVVGYMGVPKYTGISMTQHPQ-YITVRNERGKEMLS--LVKNLLEITP 359
T ADL VG P Y IS + + + VR ERG+ L+ L LE P
Sbjct: 283 TGEFADLSVGD---PWYRKISDDEPGRSLVVVRTERGRVALTKALADGALEGGP 333
>gi|336476127|ref|YP_004615268.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Methanosalsum zhilinae DSM
4017]
gi|335929508|gb|AEH60049.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanosalsum zhilinae DSM 4017]
Length = 340
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 107/261 (40%), Gaps = 35/261 (13%)
Query: 99 VVHGRGRRKDSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCV 158
VVHG L+D + V + A+ P Q G+ + I + + ++ VV +
Sbjct: 67 VVHGY------LEDEFANV-KRFFAAKSDIP---GQDGGVTSAILKSLFEKNEIDCVVGI 116
Query: 159 QSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQA 218
D + +L PE+V G K T ++ L R+ GV CQ+
Sbjct: 117 SRD--ENWQTELILMTKPEDVDKTTGTKYTYDSVVSALRE-PFEKFDRIAVVGVPCQIHG 173
Query: 219 LRSVEHHLNLEKLYVLGTNCV-----DNGTREGLDKFLKAASSEPETVLHYEFMQDYKVH 273
R + ++N + + ++G C+ D T E + + L + SE V+ +F + K
Sbjct: 174 SRLIMDNINDKIVLLVGLFCMESFYHDVMTEEIIPEKLGLSISE---VIKLDFAKG-KFW 229
Query: 274 LKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQH 333
DG VP +P ++ + C++C DYT AD+ VG +G P
Sbjct: 230 AYTRDGESHNVP---IP--EIAPLARDPCHACCDYTAIYADISVGSVGAP--------DG 276
Query: 334 PQYITVRNERGKEMLSLVKNL 354
+ +R E G+ +V+ L
Sbjct: 277 WNSVLIRTEAGERYFDMVEGL 297
>gi|150401207|ref|YP_001324973.1| nitrite and sulfite reductase 4Fe-4S region [Methanococcus aeolicus
Nankai-3]
gi|150013910|gb|ABR56361.1| nitrite and sulphite reductase 4Fe-4S region [Methanococcus
aeolicus Nankai-3]
Length = 618
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 105/250 (42%), Gaps = 43/250 (17%)
Query: 130 VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTL 189
+EG Q G+V+T +L+ ++ + V D+ P ++ + PE++ + K +
Sbjct: 81 IEG-QDGGVVSTFLKHLLENKKIDGAIVVG---DECWKPVSLIVQNPEDIEKSAKSKYAV 136
Query: 190 SPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKL-----------------Y 232
S L L G++++ G+ CQ+ LR +++ L K Y
Sbjct: 137 S-TLEALREAGEMGIEKVAVVGLPCQIAGLRKLQYFPYLAKYDGELGKNGKLAKLPKIEY 195
Query: 233 VLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAN 292
++G C + + L + L + E V ++ + + I E + +P
Sbjct: 196 LIGLLCTEKFEYDKLKEALAKNDIKIEDVKKFDIKKGKLII-------ITEDEEYKIPLK 248
Query: 293 DLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 352
D+ + C C D+ +AD+ VG +G P G S +T+R E+G+E +K
Sbjct: 249 DIE--MNAGCKMCRDFDAEMADVSVGCVGSP--DGYST------VTIRTEKGEE----IK 294
Query: 353 NLLEITPTIS 362
N +E+ +
Sbjct: 295 NAVELNEGVE 304
>gi|269926440|ref|YP_003323063.1| coenzyme F420 hydrogenase [Thermobaculum terrenum ATCC BAA-798]
gi|269790100|gb|ACZ42241.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Thermobaculum terrenum ATCC BAA-798]
Length = 396
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 99/254 (38%), Gaps = 20/254 (7%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
LG E AR + ++G Q G+VT + I +++ G ++ + + P +AR
Sbjct: 96 LGTILESYTARVSPYIDGVQDGGVVTALLIALMEAGEIDGALLARESKTTPWKAEPFIAR 155
Query: 175 TPEEVLAAKGVKPTLSPNLNTLAL--VEAAGVKRLLFCGVGCQVQALRSVEHH------L 226
TPEEV+ G + L+ L L + ++ G C++Q L++++
Sbjct: 156 TPEEVIECAGSFYNQTMALSHLDLKKYKLGPDAKIALVGTPCEIQTLKAMQARPWNWGSS 215
Query: 227 NLEKLYV-LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP 285
N++ + + + C N E L ++ + LH D + K L E
Sbjct: 216 NVDAVVLTIALLCTKNFNYEKL--MVQEIERKRGIPLHQIGKVDV-IRGKMLVYDHEGNT 272
Query: 286 YFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGK 345
P D C C D+ AD+ VG +G G S + +R + GK
Sbjct: 273 LIDEPVKDFHGAALKGCDECADFLGRTADISVGSVG--SADGYSS------VLIRTQAGK 324
Query: 346 EMLSLVKNLLEITP 359
K LE+ P
Sbjct: 325 RAFEYAKPKLELRP 338
>gi|336121589|ref|YP_004576364.1| Coenzyme F420 hydrogenase [Methanothermococcus okinawensis IH1]
gi|334856110|gb|AEH06586.1| Coenzyme F420 hydrogenase [Methanothermococcus okinawensis IH1]
Length = 359
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 30/243 (12%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
LG E L A+ V+ Q G+VT I G+++ + + D + P+ LA
Sbjct: 97 LGRILEKLKAKSKIEVKNPQSGGVVTAILANAFDEGIIDGALVMMEDKW-TMEPKSYLAT 155
Query: 175 TPEEVLAAKGVKPTLS-PNLNTLALVEAAGVK---RLLFCGVGCQVQALRSV---EHHL- 226
+ +EVL A G + + P L AL EA VK R+ G C + A+ + E+ L
Sbjct: 156 SKDEVLKASGSRYNWNVPILK--ALKEAVMVKKLNRIAVVGTPCVMNAVYQIMASENDLL 213
Query: 227 ----NLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIE 282
N +L + G C + + + + L+ + P V + ++ K+ +K ++G+
Sbjct: 214 KPFKNAIRLKI-GLFCFETYDYDKMMEILEKHNINPWDVQKMD-IEKGKLIVKLMNGNSI 271
Query: 283 EVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNE 342
E D+ + C C D+T +D+ VG +G P+ G S + VRNE
Sbjct: 272 E-----FKLKDVEHAMRAGCKVCGDFTGIASDISVGNVGTPE--GYST------VLVRNE 318
Query: 343 RGK 345
GK
Sbjct: 319 WGK 321
>gi|88602076|ref|YP_502254.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Methanospirillum hungatei JF-1]
gi|88187538|gb|ABD40535.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Methanospirillum hungatei JF-1]
Length = 337
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 27/225 (12%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRP--VL 172
LG + + AR T + Q G VT I + G+++ V+ V +DR + +P VL
Sbjct: 79 LGNYLSCIGARATTEISNKQSGGAVTAILADAFSKGLIDGVITVT---EDRWTHKPISVL 135
Query: 173 ARTPEEVLAAKGVKPTLS-PNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVE---HHL- 226
+ E+L G + S P L L V + R+ G C +QA R ++ H L
Sbjct: 136 VTSAGEMLEHAGSRYNWSVPVLKALKTAVVTKKLTRIAIIGTPCVMQAARLMKDSSHDLV 195
Query: 227 ---NLEKLYVLGTNCVDNGTREGL-DKFLKAASSEPETVLHYEFMQ---DYKVHLKHLDG 279
++G C ++ L ++ LK + + YE ++ K+ L DG
Sbjct: 196 RPFGKAIRLMVGLFCTESFNYYPLMEEILK----KNHNIQQYEIVRMDIKGKLELTLSDG 251
Query: 280 HIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPK 324
+ E +P ++ I C SC D+T AD+ G +G P+
Sbjct: 252 NTENIPL-----KEIESAIREGCKSCKDFTALDADISAGSVGTPE 291
>gi|408382471|ref|ZP_11180015.1| coenzyme F420 hydrogenase [Methanobacterium formicicum DSM 3637]
gi|407814826|gb|EKF85449.1| coenzyme F420 hydrogenase [Methanobacterium formicicum DSM 3637]
Length = 374
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 10/121 (8%)
Query: 205 KRLLFCGVGCQVQALRSVEHHLNL----EKLYVLGTNCVDNGTREGLDKFLKAASSEPET 260
K + G C + A +EH+ N+ + LG C++N + L +FLK + E
Sbjct: 7 KSVTLVGTPCHIIASEKMEHYSNILGDSPVDFKLGLFCMENFSHSYLKEFLKQNNIEMND 66
Query: 261 VLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYM 320
+ ++V HL +++ F P + + +C C DYT+ LADL VG +
Sbjct: 67 I------NQFRVEKGHLWAYLKNGDVFKAPLSQAKVCMRKNCQVCMDYTSELADLSVGSV 120
Query: 321 G 321
G
Sbjct: 121 G 121
>gi|296282735|ref|ZP_06860733.1| hypothetical protein CbatJ_03899 [Citromicrobium bathyomarinum
JL354]
Length = 423
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 42/212 (19%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVL-AAKGVKPTLSPNLNT 195
G+ T + + +L++G ++A + + L PV+A T EE+L AA+ V ++ L+
Sbjct: 84 GVTTAVLLHLLQSGRIDAAIVARQGVPAPLEASPVIASTAEEILDAAQSVYIPVA-MLDI 142
Query: 196 LALVEAAGVKRLLFCGVGCQVQALRSVEH--HLNLEKL-YVLGTNCVDNGTREGLDKFLK 252
L+ +E KR V Q ALR ++H H +++ YVLG +D F++
Sbjct: 143 LSRLEPG--KRYAITLVPEQAAALRRLQHSGHPQAQQIDYVLGPYTGTALYPAAIDSFVR 200
Query: 253 A---ASSEPETVLHY----------------EFMQDYKVHLKHLDGHIEEVPYFCLPAND 293
A A S+P T L + + ++ KV+ L +P+F A+
Sbjct: 201 AHGVAKSDPVTSLEWRAGEWPGYLEIKTQSGKVLRSKKVYYNFL------IPFFVTRAS- 253
Query: 294 LVDVIAPSCYSCFDYTNALADLVVGYMGVPKY 325
D+ N DL VG P +
Sbjct: 254 ---------LQSMDFANEFCDLSVGDAWSPAF 276
>gi|218782786|ref|YP_002434104.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit
domain-containing protein [Desulfatibacillum
alkenivorans AK-01]
gi|218764170|gb|ACL06636.1| F420-non-reducing hydrogenase, beta subunit, MvhB
[Desulfatibacillum alkenivorans AK-01]
Length = 372
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 120/309 (38%), Gaps = 53/309 (17%)
Query: 65 CSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVV-----HGRGRRKDSLDDTY----- 114
C RCG C T+ A A DG +E + H D LD+
Sbjct: 17 CHRCGGCVTFCNALNYGALDLDSDGKPYYSNIEKCIECGLCHAICPEIDELDEETKRRSA 76
Query: 115 ----LGVHEELLYARKTKPVEGAQWT--GIVTTIAIEMLKTGMVEA-VVCVQSDPDDRLS 167
+G E AR + + T G++T + + + G ++A +V Q P +
Sbjct: 77 WSEPMGRVIETTVARASSEQTRERGTDGGVITALLMHLFDRGRIDAAIVARQVGP---FA 133
Query: 168 PRPVLARTPEEVLAAKGV-------KPTLSPNLNTLALVEA------AGVKRLLFCGVGC 214
RP LA + E++L A G +LS + T + ++A G +R+ G C
Sbjct: 134 RRPFLASSKEDILDAAGFYFDTSHGPKSLSDHYKTYSSIQAFDPLIKKGFERVALVGTPC 193
Query: 215 QVQALRSVEHHLNLEKLYV---LGTNCVDNGT-REGLDKFL-KAASSEPETVLHYEFMQD 269
Q+Q++R ++ + + LG C N E KFL + V +
Sbjct: 194 QIQSVRRMQTMGLIPSNSIRLCLGLFCSGNFVFTEKEQKFLADLGGFDWNDVKRINIKEK 253
Query: 270 YKVHLKHLDGHIEEVPYFCLPANDLVDVIAP----SCYSCFDYTNALADLVVGYMGVPKY 325
+++HL G + ++ VD + P +C C DY+ AD+ G +G +
Sbjct: 254 FQIHLTS--GEVRQLD---------VDALDPIRRYACRYCPDYSAEFADISFGGVGAEEG 302
Query: 326 TGISMTQHP 334
+++ P
Sbjct: 303 WTTVISRTP 311
>gi|212224712|ref|YP_002307948.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit [Thermococcus
onnurineus NA1]
gi|212009669|gb|ACJ17051.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit [Thermococcus
onnurineus NA1]
Length = 276
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 81/196 (41%), Gaps = 25/196 (12%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 196
G VT + L+ G+++ VV + + L + V+ART EE+L G K ++ P + +
Sbjct: 34 GAVTALLAYALEKGLIDGVVTAKRT--EGLEGQAVVARTREELLETAGNKWSIVPFASRM 91
Query: 197 -ALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK------LYVLGTNCVDNGTREGLDK 249
A +E +K + + CQ Q + LE Y++ C+ E
Sbjct: 92 KAKIEEEDLKNVAVVCLPCQAQFFGQMRDFPLLESDFGERIKYIVSLFCIGTFAFEAFLN 151
Query: 250 FLKA-----ASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYS 304
+L+ A + VL +F++ Y H D LP ++ + C
Sbjct: 152 YLRMKHGIMAQDIKDIVLKGDFLEIY-----HGD------SVLSLPIKEVYSYLQAGCLV 200
Query: 305 CFDYTNALADLVVGYM 320
C DYT +D+ G++
Sbjct: 201 CTDYTGTWSDISAGFV 216
>gi|333986356|ref|YP_004518963.1| Formate dehydrogenase [Methanobacterium sp. SWAN-1]
gi|333824500|gb|AEG17162.1| Formate dehydrogenase [Methanobacterium sp. SWAN-1]
Length = 399
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 115/266 (43%), Gaps = 41/266 (15%)
Query: 120 ELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPE 177
++ YA+ + E ++ G VTT+ +L G+V+AV+ V+ + D P+L PE
Sbjct: 6 DMFYAKSSDAEIAEAGEYGGAVTTLLKFLLSEGIVDAVLAVE-EGSDLYDAVPILIEDPE 64
Query: 178 EVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE----HHLNLEKLYV 233
+V+ A G + NL + G + + A+ VE +N + + +
Sbjct: 65 KVVGAAGSLHFGTLNLAKVVTRYLNGAQDMKIAVTVKPCDAMTMVELMKREKVNADNVIM 124
Query: 234 LGTNCVDNGT------REGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
+G NC GT R+ ++KF + +P++V+ E + K+ ++ DG +E+P
Sbjct: 125 VGLNC--GGTMPPVKGRQMMEKFYEV---DPDSVVKEEIAKG-KLIVETEDGTEKEIP-- 176
Query: 288 CLPANDLVDVIA-------PSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVR 340
+DV+ +C C +ADL G GV + +I V
Sbjct: 177 -------IDVLEDEGFGRRTNCRRCEVNIPRMADLACGNWGVIG----PLAGKATFIEVC 225
Query: 341 NERGKEMLSLVKN--LLEITPTISSG 364
+ +G E+L K +L++ I G
Sbjct: 226 SPKGAEVLEKAKEAGVLDLEAPIPKG 251
>gi|410672139|ref|YP_006924510.1| formate dehydrogenase like protein, beta chain [Methanolobus
psychrophilus R15]
gi|409171267|gb|AFV25142.1| formate dehydrogenase like protein, beta chain [Methanolobus
psychrophilus R15]
Length = 383
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 109/263 (41%), Gaps = 42/263 (15%)
Query: 115 LGVHEELL-YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
+G+ ++LL YA G+VT + L+ GMVE VV ++ D PV+
Sbjct: 2 VGIGDKLLGYATNPDVRNRGASGGLVTAVLAAALEKGMVEGVVVLKR--IDEYEAIPVIT 59
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQAL--RSVEHHLNLEKL 231
+EVLA+ G + NL A+ +++ G C V+ + ++ + + LE
Sbjct: 60 DDVQEVLASGGSMHAVPVNLAKYAV-----GRKIAMPGKPCDVRGVIEQAKRNGVELEDT 114
Query: 232 YVLGTNCVDNG----TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDG-------- 279
Y++G NC TRE L + + +PE V+ E ++ K+ K DG
Sbjct: 115 YIVGLNCGGAMHPVVTREMLTRMYEI---DPEDVVGEE-IEKGKLIFKTKDGEEKAISID 170
Query: 280 HIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITV 339
+EE Y +C C ADL G GV S T + V
Sbjct: 171 ELEEAGYG----------RRENCRYCTIKIPTNADLACGNWGVIGELAGSAT----FCEV 216
Query: 340 RNERGKEML--SLVKNLLEITPT 360
NE+GK +L ++ +E+ P
Sbjct: 217 MNEKGKRLLDNAIEAGFIEVQPA 239
>gi|410670576|ref|YP_006922947.1| coenzyme F420 hydrogenase beta subunit [Methanolobus psychrophilus
R15]
gi|409169704|gb|AFV23579.1| coenzyme F420 hydrogenase beta subunit [Methanolobus psychrophilus
R15]
Length = 341
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 113/290 (38%), Gaps = 43/290 (14%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
+G + +++ A+ + Q G VT I L+ GM++AVV V DP L P +
Sbjct: 78 IGTYIDIVSAKAEFGIPRKQSGGAVTAILANALEQGMIDAVVTVVEDP-WTLRPSSAVIT 136
Query: 175 TPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKL--- 231
+ E ++ G + L +A ++ A + R V + H + L
Sbjct: 137 SGEALVHHAGSRYNWWVPL--VASLKEAIINRKFTNVAVVGVPCVVEAIHQMRESDLDLL 194
Query: 232 --------YVLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI 281
V+G C + E L DK + + +P + ++ ++ LK DG +
Sbjct: 195 RPFRKYIRLVVGLFCTETFDYEKLVQDKLIAQKNLDPLDITRFDVKGKLEITLK--DGSL 252
Query: 282 EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRN 341
L N++ D + P C C D T +D+ G +G P Q + +RN
Sbjct: 253 T-----VLSLNEVEDCVRPGCKICTDLTALHSDISAGSIGSP--------QGYTTLIIRN 299
Query: 342 ERGKEMLSLVKNLLEITPTISSGD---RRPFVMETVKADDNAKMGRGPSQ 388
G++ +T I +G + +E++K KM R P +
Sbjct: 300 PTGRQF---------VTSAIGNGKLSLEKGVNLESIKKLSTKKMERMPEE 340
>gi|284162671|ref|YP_003401294.1| coenzyme F420 hydrogenase [Archaeoglobus profundus DSM 5631]
gi|284012668|gb|ADB58621.1| Coenzyme F420 hydrogenase [Archaeoglobus profundus DSM 5631]
Length = 405
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 98/205 (47%), Gaps = 20/205 (9%)
Query: 124 ARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAK 183
+++ K +GA + + A+EM G+++ + V D +R P V + P+++ + +
Sbjct: 161 SKRFKGQDGAMVSEFIAC-ALEM---GIIDTALMVSRD--ERWKPIIVHVKHPDQLKSER 214
Query: 184 --GVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTN--C 238
G K +L+P L L +++ AG RL G C + LR ++ + L L + C
Sbjct: 215 ITGTKYSLAPVLPELNKVIKRAG--RLAIVGTPCIITGLRLLQKEIPLYNKVKLAVSLFC 272
Query: 239 VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVI 298
++N L +FL+ + + V ++ ++ K ++ +DG F P +L + +
Sbjct: 273 MENFRYSSLMEFLREKNIDATKVKKFD-IKKGKFIVEMVDG------VFDCPIKELEEHV 325
Query: 299 APSCYSCFDYTNALADLVVGYMGVP 323
+ C C D+ +D+ +G +G P
Sbjct: 326 SNGCNYCLDFAGVDSDVSIGSVGSP 350
>gi|218780822|ref|YP_002432140.1| coenzyme F420 hydrogenase [Desulfatibacillum alkenivorans AK-01]
gi|218762206|gb|ACL04672.1| Putative coenzyme F420 hydrogenase, beta subunit [Desulfatibacillum
alkenivorans AK-01]
Length = 371
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 101/254 (39%), Gaps = 24/254 (9%)
Query: 103 RGRRKDSLDDTYLGVHEELLYARKTKPVEGA--QWTGIVTTIAIEMLKTGMVEAVVCVQS 160
+ R + D T +G H E A+ + Q G VT + L M+ V +
Sbjct: 68 KARTGRAFDGTPIGPHLETYKAKAGEKTAECTFQCGGTVTALVSCALDNKMISGAVL--T 125
Query: 161 DPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALR 220
D + R+ P+P L RT E+ G K + SP L+ L GV+ + CQ A+
Sbjct: 126 DSEGRM-PKPRLVRTSEQARDCAGSKYSASPTLSVLNREAKRGVRNMGVVATPCQALAIS 184
Query: 221 SVEHHLNLEKLY------VLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHL 274
++ + + + V+G C L+ L E + + +V +
Sbjct: 185 QMKMNPTDKPDFEDPVSLVIGLFCTWALDARKLEALLAEKGIEGKIIKADVPPPPAEVFV 244
Query: 275 KHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHP 334
D E+P +++ ++I C C D T+ LAD+ VG V G +
Sbjct: 245 VETDQGTVEIPL-----SEVREIIPEGCSICPDMTSELADVSVGQ--VEGEAGFNT---- 293
Query: 335 QYITVRNERGKEML 348
+ +R ++G E++
Sbjct: 294 --LIIRTQKGAELV 305
>gi|392409728|ref|YP_006446335.1| coenzyme F420-reducing hydrogenase, beta subunit [Desulfomonile
tiedjei DSM 6799]
gi|390622864|gb|AFM24071.1| coenzyme F420-reducing hydrogenase, beta subunit [Desulfomonile
tiedjei DSM 6799]
Length = 351
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 96/239 (40%), Gaps = 30/239 (12%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
AQ G+VT++ L+ G+++A V + S DD P ++A V+ G K +
Sbjct: 101 AQGGGVVTSLVSAALEEGIIQAAV-LTSSADDGF-PCGIVATDRHAVMNCSGSKFVGAHT 158
Query: 193 LNTLALVEAAGVKRLLFCGVGCQVQALRSV------EHHLNLEKLYVLGTNCVDNGTREG 246
L L G R+ G+ CQV+A+R + HL V+G C +
Sbjct: 159 LEALRDALDRGFDRIGIVGLPCQVRAIRKMALLDLKNEHLQERLSLVVGLFCNWALSVRE 218
Query: 247 LDKFLKAASSEPETVLHYEFMQDYKV---HLKHLDGHIEEVPYFCLPANDLVDVIAPSCY 303
L FL A L ++ + + L + E +P +++ I +C
Sbjct: 219 LLPFLHAE-------LKGHAVKKFDIPPPPANLLIAYTAENQTIEIPLDNVRQFIQKACT 271
Query: 304 SCFDYTNALADLVVG-YMGVPKYTGISMTQHPQYITVRNERGKEMLSLV--KNLLEITP 359
C D T+ AD+ VG Y G P + + VR G ++ L K +E+ P
Sbjct: 272 VCGDMTSEFADVSVGMYEGRPGW---------NTVLVRTTTGSNLIKLAEEKRKIELEP 321
>gi|395645325|ref|ZP_10433185.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanofollis liminatans DSM 4140]
gi|395442065|gb|EJG06822.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanofollis liminatans DSM 4140]
Length = 433
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 31/231 (13%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
+Q GIVT + + + +E + +P+ + P+ V A + E++ A G S
Sbjct: 96 SQSGGIVTALLCYLFEQKEIEGAIVNNLNPETK-RPQAVFASSMSEIIEASGSYYAQSSV 154
Query: 193 LNTLALVEAAGVKRLLFCGVGCQVQALRSVEH---HLNLEKLYVLGTNCVDNGTREGLDK 249
+ T+ +E + K +GCQ ++L+ + ++NL Y +G C + + +D
Sbjct: 155 VKTI--LEHSDKKSAAVV-LGCQAESLQLIREKYPNINL-PTYTIGLVCAGQYSGDMIDD 210
Query: 250 FLKAASSEPETVLHYEFMQDY-----KVHLKHLDGHIEEVPYFCLPA---NDLVDVIA-P 300
++ + + E + + F VH+K G + LP + L V
Sbjct: 211 LIEQSGCDGEKISEFRFRDKRVGWPGDVHVKTPSGD------YWLPKERRHSLKQVYELH 264
Query: 301 SCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITV---RNERGKEML 348
C C+D N D+V G GIS Q+P+ TV R +GK++L
Sbjct: 265 RCMVCYDQMNIFCDIVCG-----DPWGISHKQNPEGYTVVIARTTKGKKIL 310
>gi|294496614|ref|YP_003543107.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta domain protein
[Methanohalophilus mahii DSM 5219]
gi|292667613|gb|ADE37462.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanohalophilus mahii DSM 5219]
Length = 387
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 83/209 (39%), Gaps = 25/209 (11%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
Q G+VT + L+ G+++ V D P ++A +VL + G + S
Sbjct: 137 GQDGGVVTALLAYGLEEGLIDCAVVTTQSKDQPWKPVAIIAEDRAQVLESSGSMYSHSMT 196
Query: 193 LNTLALVEAAGVKRLLFCGVGCQVQALRSVE-------HHLNLEKLYVLGTNCVDNGTRE 245
+ L G++ + F G C + A+ ++ H + LG C+D + E
Sbjct: 197 MEQLMQAIQQGMRSIAFVGPSCNIDAVHKMQRSPYGFLHLFMRANVLRLGLFCMDTFSYE 256
Query: 246 GLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIE-----EVPYFCLPANDLVDVIAP 300
G+ +F++ H + D + +K G E ++ F L D + +
Sbjct: 257 GIREFVEN---------HGMRLADIEA-MKIRKGKFEFEQAGQISRFSLSEFD--EYRSS 304
Query: 301 SCYSCFDYTNALADLVVGYMGVPK-YTGI 328
SC C D +D+ G +G P YT +
Sbjct: 305 SCKFCTDMAAENSDISFGGVGTPDGYTTV 333
>gi|336120497|ref|YP_004575282.1| hypothetical protein MLP_48650 [Microlunatus phosphovorus NM-1]
gi|334688294|dbj|BAK37879.1| hypothetical protein MLP_48650 [Microlunatus phosphovorus NM-1]
Length = 419
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 11/219 (5%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 196
G+++ +A+ L++G + V++ D L VL R+ E+VL + G + + L
Sbjct: 109 GVISALAVHALESGSAVGTLGVRARRDAPLLNETVLNRSREDVLNSAGSRYAPASPCQRL 168
Query: 197 ALVEAAGVKRLLFCGVGCQVQALRS---VEHHLNLEKLYVLGTNCVDNGTREGLDKFLKA 253
LVE A + G C + A RS + L + +G C + + ++ + +
Sbjct: 169 DLVENA-EGPCVVVGKPCDIAATRSAATLRPALGDKVALTIGIFCAGTPSTQATEQVIAS 227
Query: 254 ASSEPETVLHYEFMQD---YKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTN 310
+P + + ++ + ++ DG E Y L C C D+T
Sbjct: 228 LGLDPASTVRVDYRGEGWPGSFRVETSDGRRGETTYAEAWGGTLAKHRQWRCQICPDHTG 287
Query: 311 ALADLVVGYMGVPKYTGISMTQHPQ-YITVRNERGKEML 348
ADL VG P Y ++ + + + VR RG+ L
Sbjct: 288 EFADLSVGD---PWYREVAEDEPGRSLVVVRTSRGQAAL 323
>gi|423286529|ref|ZP_17265380.1| hypothetical protein HMPREF1069_00423 [Bacteroides ovatus
CL02T12C04]
gi|392675216|gb|EIY68658.1| hypothetical protein HMPREF1069_00423 [Bacteroides ovatus
CL02T12C04]
Length = 423
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 119/285 (41%), Gaps = 23/285 (8%)
Query: 112 DTYLGVHEELL--YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPR 169
D Y+G +E L Y+ + A G++++I I +L+ ++ + + ++ L P
Sbjct: 83 DKYIGNYERLYTGYSSDMNIRKTANSGGLLSSILIFLLQKRYIDGAIITRYSSENPLQPS 142
Query: 170 PVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALR---SVEHHL 226
+A T EE+L +KG K TL G KR + G+ C +Q++R ++ +
Sbjct: 143 AFIATTSEEILESKGSKYAPVQLSGTLRKALLLG-KRYVIVGLPCHIQSVRKWAKIDSKV 201
Query: 227 NLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEV-- 284
+ C D + + E + + F + K LK + + E +
Sbjct: 202 DKVIFAYFSLYCSSERCFYAQDYLCRYFNIEKCNIKEFSFRE--KGKLKFIGNNGENLLS 259
Query: 285 ------PYFCLPANDLVDVIAPS-CYSCFDYTNALADLVVGYMGVPKYT----GIS--MT 331
P F + P+ C C D+ LAD+ G +G+ YT GI+ +
Sbjct: 260 MRRGDSPVFHKYYRLVGSHFKPNRCQMCVDHYGYLADMSFGDIGIAPYTQDKIGINSLIV 319
Query: 332 QHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKA 376
++P++I + NE K+ +K+L S GD ++ KA
Sbjct: 320 RNPKFIEILNEAIKDGCIELKSLDPDLLNKSQGDMMFSRLKKAKA 364
>gi|119887|sp|P06130.1|FDHB_METFO RecName: Full=Formate dehydrogenase subunit beta
gi|149709|gb|AAA72183.1| formate dehydrogenase B (fdhB) [Methanobacterium formicicum]
Length = 399
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 109/249 (43%), Gaps = 31/249 (12%)
Query: 120 ELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPE 177
++ YA+ + E ++ G VTT+ +LK G+V+AV+ V S D P+L PE
Sbjct: 6 DMFYAKSSDAEIAEAGEYGGAVTTLLKFLLKEGIVDAVLAVDSSA-DLYDVVPILIEDPE 64
Query: 178 EVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVE----HHLNLEKLYV 233
+V+ A G + NL + G + + A+ VE +N + + +
Sbjct: 65 DVVKAAGSLHFGTLNLAKVVTRYLDGAQDMKIAVTVKPCDAMTMVELMKREKVNADNVIM 124
Query: 234 LGTNCVDNGT------REGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYF 287
+G NC GT R+ +++F + +P++V+ E + K+ ++ DG +E+P
Sbjct: 125 VGLNC--GGTMPPVKGRQMMEEFYEV---DPDSVVKEEIAKG-KLIVETEDGTEKEIPI- 177
Query: 288 CLPANDLVDV---IAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 344
++L D +C C +ADL G GV + +I V + +G
Sbjct: 178 ----DELEDEGFGRRTNCRRCEVNIPRMADLACGNWGVIG----PLAGKATFIEVCSPKG 229
Query: 345 KEMLSLVKN 353
E+L K
Sbjct: 230 AEVLEKAKE 238
>gi|262163802|ref|ZP_06031542.1| coenzyme F420-dependent oxidoreductase [Vibrio mimicus VM223]
gi|262027782|gb|EEY46447.1| coenzyme F420-dependent oxidoreductase [Vibrio mimicus VM223]
Length = 400
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 23/195 (11%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPT-LSPNLNT 195
GIVT + L++ +V+ VV + SD ++ + +++ +++ + G + + SP +N
Sbjct: 96 GIVTQTLLHALESKLVDLVVQIASDKNNPIENIVKISKNKNDLIESTGSRYSPASPLINI 155
Query: 196 LALVEAAGVKRLLFCGVGCQVQALR---SVEHHLNLEKLYVLGTNCVDNGTREGLDKFLK 252
+ +++ K++ F G C ALR S++ + + ++ C +R G+ K L
Sbjct: 156 VQIIKKNPNKKIAFVGKPCDCVALRNLMSIDDEVKKSIILIVSFFCAGTPSRNGVKKVLD 215
Query: 253 AASSEPETVLHYE---FMQDYKVHLKHLDGH--------IEEVPYFCLPANDLVDVIAPS 301
+ LHY+ + D+ K G I + Y N L I
Sbjct: 216 S--------LHYDNKKRVTDFYYRGKGWPGKTTLIQGRSINSMDYSESWGNLLGPTIQSR 267
Query: 302 CYSCFDYTNALADLV 316
C C D T +AD+V
Sbjct: 268 CKLCADGTGEVADIV 282
>gi|302342322|ref|YP_003806851.1| coenzyme F420 hydrogenase [Desulfarculus baarsii DSM 2075]
gi|301638935|gb|ADK84257.1| Coenzyme F420 hydrogenase [Desulfarculus baarsii DSM 2075]
Length = 360
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 94/231 (40%), Gaps = 31/231 (13%)
Query: 133 AQWTGIVTTIAIEMLKTGMV-EAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSP 191
AQ+ G+V+ + L G+V EAVV + D R +P+ V R ++VLAA G +
Sbjct: 111 AQYGGVVSALLGLALDEGVVGEAVV---TKADQRGAPQGVRVRRRDQVLAAAGSRYAAGA 167
Query: 192 NLNTL--ALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKL-----YVLGTNCVDNGTR 244
L+ L AL E A L + CQ A S+ H + V+G C N +
Sbjct: 168 GLSALNQALAETAS-HPLAVVALPCQALAAASMSAHPGYPQAASRLKLVIGLFCTLNLSA 226
Query: 245 EGLDKFLKAASSEPETVLHYEFMQDYK--VHLKHLDGHIEEVPYFCLPANDLVDVIAPSC 302
GL L+ A + VL +F + + G E +P + + C
Sbjct: 227 RGLRALLEQAGVA-QPVLRADFPPPPAGVFQVTNAAGMAE------IPLEQVHQAVLKGC 279
Query: 303 YSCFDYTNALADLVVGYM-GVPKYTGISMTQHPQYITVRNERGKEMLSLVK 352
C D T LAD+ VG + G P + + R G E++ L +
Sbjct: 280 GLCPDLTAELADVAVGAVEGRPGWN---------TVLARTPAGLELVELAR 321
>gi|15678221|ref|NP_275336.1| coenzyme F420-reducing hydrogenase subunit beta-like protein
[Methanothermobacter thermautotrophicus str. Delta H]
gi|2621237|gb|AAB84699.1| coenzyme F420-reducing hydrogenase, beta subunit homolog
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 352
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 113 TYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVL 172
T LG + E+L AR P+ Q G+VT + L+ G+++ + V D + P PVL
Sbjct: 269 TPLGEYIEILSARA--PMFRGQDGGVVTALLTYALREGIIDGALVVDRDQERPWKPLPVL 326
Query: 173 ARTPEEVLAAKGVKPTLSPNLNTL 196
A P++++ A G K + P L L
Sbjct: 327 AEEPQDIVKAAGTKYSACPLLKVL 350
>gi|435849477|ref|YP_007311665.1| coenzyme F420-reducing hydrogenase, beta subunit [Natronococcus
occultus SP4]
gi|433675685|gb|AGB39875.1| coenzyme F420-reducing hydrogenase, beta subunit [Natronococcus
occultus SP4]
Length = 412
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 87/233 (37%), Gaps = 21/233 (9%)
Query: 134 QWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNL 193
Q G+VT + E+++ ++ V + D+ L P LA + EE+LAA G + L
Sbjct: 127 QDGGVVTALLAELIERDELDGAVVARESKDEPLRGVPFLATSREELLAAAGSSYNQTMGL 186
Query: 194 NTLALVEAAG-----VKRLLFCGVGCQVQ---ALRSVEHHLNLEKLYVLGTNCVDNGTRE 245
L + AA L G C +Q AL +H + C + +
Sbjct: 187 GELDDLLAASELDPETAELALVGTPCMIQGATALDRYDHAPADPISLTVALLCTRSFEYD 246
Query: 246 GLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSC 305
L L+ +P + + + L D E V + A D + C C
Sbjct: 247 RLRSSLEGYDLDPNEIERLDISEGV---LSAFDADGESVLEADVDAFDAAGLRG--CDEC 301
Query: 306 FDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEIT 358
D+ A ADL VG +G T ++ VR E G+ + LE T
Sbjct: 302 ADFVGAAADLSVGNVGTDPGTTTAI--------VRTENGRRAWKRASDALETT 346
>gi|70731995|ref|YP_261737.1| coenzyme F420-reducing hydrogenase subunit beta-like protein
[Pseudomonas protegens Pf-5]
gi|68346294|gb|AAY93900.1| coenzyme F420-reducing hydrogenase, beta subunit-like protein
[Pseudomonas protegens Pf-5]
Length = 402
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 18/235 (7%)
Query: 97 ETVVHGRGRRKDSLDDTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEA 154
E + GR RR + + +LG+ + + AR T P V + G TT+ + + V+
Sbjct: 67 ELELFGRTRRAE---ERWLGISRQAIGARSTDPQIVRRSASGGTATTLLLTAREHFDVDL 123
Query: 155 VVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVG 213
+ + P P L ++ L+P LN L E R+ G+
Sbjct: 124 TLTMGRHPGQGWRSAPQLGSAAAAIINNAQSTYQLAPYLNALRECYEQQPDARIAVVGLA 183
Query: 214 CQVQALRSVE-------HHLNLEKLYVLGTNCVDNGTREGLDKFL-KAASSEPETVLHYE 265
C VQA+R ++ H + V+ T C N G + + +P+ V +
Sbjct: 184 CHVQAIRKLQRRDTAIGHWARSRIICVIETACSSNTLPAGTHSIISEVLGQDPQQVRDIK 243
Query: 266 FMQ-DY--KVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVV 317
+ + DY ++ + LD + ++ + L D C SC D+ + LAD+ V
Sbjct: 244 YREGDYPGRLQVTLLDSQTFGIDFWEI-LGKLKDNKTFRCLSCGDWMSGLADVSV 297
>gi|374628405|ref|ZP_09700790.1| formate dehydrogenase, beta subunit (F420) [Methanoplanus limicola
DSM 2279]
gi|373906518|gb|EHQ34622.1| formate dehydrogenase, beta subunit (F420) [Methanoplanus limicola
DSM 2279]
Length = 410
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 98/253 (38%), Gaps = 29/253 (11%)
Query: 121 LLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVL 180
L +A+ +E + G VT I L+TG+V+AV V+ D +P PE++
Sbjct: 9 LAWAKDAAYLEKGECGGAVTAILKNALETGLVDAVFAVEKGYD-IYDAKPAFITNPEDIE 67
Query: 181 AAKG---VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSV--EHHLNLEKLYVLG 235
G L P L ++ A +L GC +AL + +NL+ +Y +G
Sbjct: 68 RLSGSLHCGTLLMPKL-IKKFLDGAKNMKLAVTLKGCDAKALYELAKRQQINLDNIYTIG 126
Query: 236 TNCVDNGTREGLDKFLKAA-SSEPETVLHYEFMQDYKVHLKHLDGH-------IEEVPYF 287
NC + + K ++ P+ V+ E + + + H +EE Y
Sbjct: 127 LNCGGSISPVAGRKMIEEKFGVSPDDVVKEEIDKGQFIIVTKDGEHKGIKIDELEEEGYG 186
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
+C C D+ G GVP T +I V +++G E+
Sbjct: 187 ----------RRANCQRCKTKVPRQCDIACGNWGVPADKAGKAT----FIEVCSDKGAEL 232
Query: 348 LSLVKNLLEITPT 360
++ V +E PT
Sbjct: 233 INKVSGGIETAPT 245
>gi|172038265|ref|YP_001804766.1| hypothetical protein cce_3352 [Cyanothece sp. ATCC 51142]
gi|354554384|ref|ZP_08973689.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. ATCC 51472]
gi|171699719|gb|ACB52700.1| unknown [Cyanothece sp. ATCC 51142]
gi|353554063|gb|EHC23454.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Cyanothece sp. ATCC 51472]
Length = 470
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 31/207 (14%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 196
G+++ + I +L+TG ++ V ++ DD P++A T EE+L A ++P L L
Sbjct: 110 GVISRVLIHLLETGEIDGAVVLRQGLDDPEKATPIIATTAEEILEAAQSVYAVTPMLTIL 169
Query: 197 ALVEAAGVKRLLFCGVGCQVQALRSVEHHLN---LEKLYVLGTNCVDNGTREGLDKFLKA 253
+E L F G+ Q+ LR ++ N + ++V G N L FL++
Sbjct: 170 PEIEEFE-GNLAFVGLPEQISVLRMLQASGNEAAKKVVFVAGPYTGTNMYLGALRAFLRS 228
Query: 254 ASSEPETVLHYEFMQDYKVHLKHLDGHIEEVP-YFCLPAND--------------LVDVI 298
+ + D KV +K + E P Y + D + I
Sbjct: 229 -----------QRVSD-KVAIKKVQWRAGEWPGYLQIDTADDRSFKAQKFYYNYLIPFYI 276
Query: 299 APSCYSCFDYTNALADLVVGYMGVPKY 325
+ +C D++N DL VG P++
Sbjct: 277 SRNCQIIPDFSNECTDLSVGDAWSPQF 303
>gi|322690566|ref|YP_004220136.1| oxidoreductase [Bifidobacterium longum subsp. longum JCM 1217]
gi|320455422|dbj|BAJ66044.1| putative oxidoreductase [Bifidobacterium longum subsp. longum JCM
1217]
Length = 478
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 113/257 (43%), Gaps = 35/257 (13%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL 196
G+++ +A +ML+ G+V+AV+ + PD + ++RT +E+ A G K P +
Sbjct: 124 GMISWLAAKMLQDGLVDAVIHAKDGPDPKNMYTIQISRTVDEIKA--GAKAKYYPIELSE 181
Query: 197 ALVEAAGVK-RLLFCGVGCQVQALRSV--EHHLNLEKL-YVLGTNCVDNGTREGLDKFLK 252
A+ + + R LF G+ C V+A+R + E + ++++ Y +G C + D F +
Sbjct: 182 AIKQVREHEGRYLFIGLPCFVKAVRLLRREDPVLMKRIPYCIGLICGHLKS----DFFGQ 237
Query: 253 AASSEP----ETVLHYEFMQ--------DYKVHLKHLDGH---IEEVPYFCLPANDLVDV 297
A + E + + +F DY + ++ D ++ + L
Sbjct: 238 AEAWESGVPLDKIARVDFRHKTSGTRASDYAIEVRRTDKDEPIVKRIAELSTANWGLGYF 297
Query: 298 IAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLL-- 355
+C C D AD G +PKY +S + I +RN+ +++ + +N L
Sbjct: 298 KYNACDYCDDVLAETADATFGDAWIPKY--VSDDKGCNVIIIRNQAIQDLFNRYRNELVL 355
Query: 356 ------EITPTISSGDR 366
E+ + SSG R
Sbjct: 356 HDSDATEVYQSQSSGFR 372
>gi|254443094|ref|ZP_05056570.1| Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminal
domain family protein [Verrucomicrobiae bacterium
DG1235]
gi|198257402|gb|EDY81710.1| Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminal
domain family protein [Verrucomicrobiae bacterium
DG1235]
Length = 360
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 122/296 (41%), Gaps = 32/296 (10%)
Query: 137 GIVTTIAIEMLKTGMVE-AVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNT 195
G+VT +++TG V+ A+VC D + +A++ +E+ A+ K P L
Sbjct: 36 GVVTATLCYLIETGRVQGALVCSSQFEDGVFDFKLSIAQSRKELFEAQSSKYFDIPVLKG 95
Query: 196 LALVEAAGVKRLLFCGVGCQVQAL-RSVEHHLNLEKL--YVLGTNCVDNGTREGLDKFLK 252
L LV++ K + G+ Q+ +L R + + L K + + C N +E ++ K
Sbjct: 96 LDLVKSFDGK-VAVVGLPSQINSLTRRMAKNEELRKKVGFRIALFCGHNSKKELIEHIWK 154
Query: 253 AASSEPETVLHYEFMQDY---KVHLKHLDGHIEEVPYFCLPANDLVDVIA-PSCYSCFDY 308
+ + + + Q + ++ L DG + P+ + +++ C +C D+
Sbjct: 155 KKGIDGRDIEQFRYRQGHWRGQMELTMKDGTLSRFPFQDFSHYQNLHILSLDRCLNCHDH 214
Query: 309 TNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKN--LLEITPTISSGDR 366
+DL G + + K + +H ++ R +E++ +K+ LLE P
Sbjct: 215 MGYYSDLSTGDVWLHK-MKVDPVKHSIFLA-RTSLAEEIIQKMKSSGLLEAKPV-----D 267
Query: 367 RPFVMETVKADDNAKMGRGPSQPAPKFVG--------------NLIAFFINLVGPK 408
R FV + K N K++G +L+A FI L+ K
Sbjct: 268 RQFVYRSQKRSINYHYNLSARAMVGKWLGVKVKDRTKEKPKVRDLVAAFIVLLNHK 323
>gi|408382276|ref|ZP_11179821.1| coenzyme F420 hydrogenase [Methanobacterium formicicum DSM 3637]
gi|407814932|gb|EKF85554.1| coenzyme F420 hydrogenase [Methanobacterium formicicum DSM 3637]
Length = 685
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 129/325 (39%), Gaps = 60/325 (18%)
Query: 63 DHCSRCGLCDTYYIAHV---------KDACAFLGDGMSRIEGLETVVHGRGRRKDSLDDT 113
D C++CG C ++ + C G GM E V G+ + K T
Sbjct: 83 DMCAKCGTCAVICPNNILSFDGKPELTEECLRNGHGMC-FEVCPRVSSGKYQIKIREKFT 141
Query: 114 YLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
EE+ Y R + Q G VTT +L+ ++ + V D+ P ++
Sbjct: 142 -----EEMYYGRGSSS---GQDGGAVTTFLKHLLENDKIDGAIVV---GDEYWKPVSLIV 190
Query: 174 RTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK--- 230
+ E++L K T+S L L G++R+ + CQ+ LR +++ L K
Sbjct: 191 QNAEDLLKTSKSKYTIS-TLEALKTAGDMGLERVAIVALPCQINGLRKLQYFPYLAKHEE 249
Query: 231 --------------LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKH 276
Y++G C + + + L+ + E V + ++ K+ +
Sbjct: 250 ELGRTGKPVKLPKIEYLIGLFCTEKFDYGNMKQILEDNQIKMEDVEKFN-VKKGKLRV-Q 307
Query: 277 LDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQY 336
+DG +++ D +++ A C C D+ +AD+ +G +G P G S
Sbjct: 308 VDGEEKKIDL------DKIELCA-GCKMCRDFDAEMADVSIGSVGSP--VGYST------ 352
Query: 337 ITVRNERGKEMLSLVKNLLEITPTI 361
I +R +G+E +K LE+ +
Sbjct: 353 IIIRTPKGQE----IKEALELEEGV 373
>gi|108803806|ref|YP_643743.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta-like protein
[Rubrobacter xylanophilus DSM 9941]
gi|108765049|gb|ABG03931.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Rubrobacter xylanophilus DSM 9941]
Length = 400
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 99/259 (38%), Gaps = 30/259 (11%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
LG E AR + + G Q G+V+ + I +L+ G ++ + + + LAR
Sbjct: 100 LGRVHESYTARVREDIPGVQDGGVVSALLIALLEAGEIDGALVARESDREPWKGEAFLAR 159
Query: 175 TPEEVLAAKG--VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLY 232
TPEEV A G TL+ L E R+ G C+V+ +R+++ + +
Sbjct: 160 TPEEVREAAGSFYNQTLALGHLDLKGYELPPNPRIAVVGTPCEVEGIRAMQA-----RPW 214
Query: 233 VLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCL--- 289
G++ V+ L S E ++ E V L + G ++ + +
Sbjct: 215 KWGSSRVEAVVL--TVALLCTKSFNYEKLMLEELRDRRGVDLGEV-GRVDVIRGKLIVQD 271
Query: 290 ---------PANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVR 340
P D C C D+ AD+ VG +G G S + +R
Sbjct: 272 RGGRTILEEPIKDFHGAALKGCDECADFLGHAADISVGSVG--SADGYS------SVLIR 323
Query: 341 NERGKEMLSLVKNLLEITP 359
E G V++ LE+ P
Sbjct: 324 TEEGLAAFEHVRDRLELRP 342
>gi|383319626|ref|YP_005380467.1| Coenzyme F420-reducing hydrogenase, beta subunit [Methanocella
conradii HZ254]
gi|379320996|gb|AFC99948.1| Coenzyme F420-reducing hydrogenase, beta subunit [Methanocella
conradii HZ254]
Length = 341
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 23/214 (10%)
Query: 134 QWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNL 193
Q G VT + L+ +V+ V + D D L+ P + E + A G K T + L
Sbjct: 101 QNGGAVTALLKAALQEELVDRAVVMGVDRWD-LNAYPCIIEDAEGLERAAGSKYTTNGIL 159
Query: 194 NTL-ALVEAAGVKRLLFCGVGCQVQALRSVEHHLN--LEKL-----YVLGTNCVDNGTRE 245
+ +++ ++ + G C VQA+ + N E+L +++G C E
Sbjct: 160 EAMRGIIKDESIRSVALVGTPCTVQAIGLLRKSSNEYAERLAHKVRFLIGLFCF-----E 214
Query: 246 GLDKFLKAASSEPETVLHYEFMQ----DYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPS 301
D L + +V + + + K+ + G + LP + L D + P
Sbjct: 215 SFDSSLIPEVARRLSVPSWRIAKMNAGEGKLTVTLRSGEVRA-----LPLSSLTDFVRPG 269
Query: 302 CYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQ 335
C+ C D+T+ LAD+ VG +G + + + P+
Sbjct: 270 CFKCNDFTSRLADVSVGSVGSAHGSSALIVRTPE 303
>gi|424875371|ref|ZP_18299033.1| coenzyme F420-reducing hydrogenase, beta subunit [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|393171072|gb|EJC71119.1| coenzyme F420-reducing hydrogenase, beta subunit [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 412
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 99/237 (41%), Gaps = 19/237 (8%)
Query: 96 LETVVHGRGRRKDSLDDTYLGVHEELL--YARKTKPVEGAQWTGIVTTIAIEMLKTGMVE 153
LET + GR R+ + + +LG+H E+L YA T+ + G +T + + ++
Sbjct: 67 LETGLFGRPRKPE---ERWLGIHREVLGCYASDTEINARSASGGSITELLLSAKDKLGLD 123
Query: 154 AVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA--LVEAAGVKRLLFCG 211
A++ V + + L T E++L + L P L L L + R+ G
Sbjct: 124 AILAVGRELERPGFAVGHLFETREDLLESCQSTYQLFPYLRILKRLLTDMNWEYRIAMVG 183
Query: 212 VGCQVQALRSVEHHLN-------LEKLYVLGTNCVDNGTREGLDKFLK---AASSEPETV 261
+ C VQA+R ++ N +V+ C N EG D L+ S +
Sbjct: 184 LACHVQAIRKLQALDNELGARARARIAFVVEAACSSNTLPEGTDSLLRNEAGVSLDRVKS 243
Query: 262 LHYEF-MQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVV 317
L Y + ++ + DG I + ++ ++ C SC D+ + LAD+ +
Sbjct: 244 LRYRAGLYPGEIAAETADGEIVTIAFW-KAVHEFKRFKTHRCLSCGDWFSGLADVAI 299
>gi|389849350|ref|YP_006351586.1| coenzyme F420-reducing hydrogenase subunit beta [Haloferax
mediterranei ATCC 33500]
gi|448619018|ref|ZP_21666955.1| coenzyme F420-reducing hydrogenase subunit beta [Haloferax
mediterranei ATCC 33500]
gi|388246656|gb|AFK21599.1| coenzyme F420-reducing hydrogenase, beta subunit [Haloferax
mediterranei ATCC 33500]
gi|445745624|gb|ELZ97090.1| coenzyme F420-reducing hydrogenase subunit beta [Haloferax
mediterranei ATCC 33500]
Length = 574
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 100/249 (40%), Gaps = 40/249 (16%)
Query: 131 EGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG--VKPT 188
E AQ G+VT++ I +L+ G ++ + D+ LA TPEE++ G T
Sbjct: 286 ENAQDGGLVTSVLIHLLEAGEIDGALIATESEDEPWKAESFLATTPEELIENAGSFYNQT 345
Query: 189 LS-PNLNTLALVEAAGVK-----RLLFCGVGCQVQALRSVE----HHLNLEK-----LYV 233
++ NLN E K L G C+++ +R+++ + + E+ Y
Sbjct: 346 MALGNLNVDQWKEKLPAKDPESLSLALVGTPCEIEGIRALQDFEWDYASQEEGIRAIDYT 405
Query: 234 LGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQ-DYKVHLKHLDGHI---EEVPYF 287
+ C N E L ++ PE + + + D V+ + DG + E++ F
Sbjct: 406 IALMCTKNFNYERLIGEQLEAKRGIAPEEIGKMDVLNGDMMVYDR--DGEMILQEDIEAF 463
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
A C C D+T ADL VG +G + + +R E+G +
Sbjct: 464 HGAA-------LKGCDECADFTGYCADLTVGSVG--------SSDEYSSVIIRTEQGLKA 508
Query: 348 LSLVKNLLE 356
L + L+
Sbjct: 509 WELTEPDLD 517
>gi|327401003|ref|YP_004341842.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Archaeoglobus veneficus SNP6]
gi|327316511|gb|AEA47127.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Archaeoglobus veneficus SNP6]
Length = 405
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
+G + ++L A+ T+ A +G T++ I ++ +++ + V +P +A
Sbjct: 209 IGPYRQILSAKSTRIDAVAAGSGAATSLLIYAMEAELIDCAIVV--------GKKPFIAT 260
Query: 175 TPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVL 234
P E+ A G+K ++P L L G +++ GV C V A R ++ E +
Sbjct: 261 KPHELTKAAGIKFAVAPTLALLKDAVKRGFRKIAVVGVPCHVTAARKMQKLGCDEIKLIF 320
Query: 235 GTNC 238
G C
Sbjct: 321 GVFC 324
>gi|94266514|ref|ZP_01290203.1| 4Fe-4S ferredoxin, iron-sulfur binding:Coenzyme F420
hydrogenase/dehydrogenase beta subunit-like [delta
proteobacterium MLMS-1]
gi|93452874|gb|EAT03391.1| 4Fe-4S ferredoxin, iron-sulfur binding:Coenzyme F420
hydrogenase/dehydrogenase beta subunit-like [delta
proteobacterium MLMS-1]
Length = 451
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 27/234 (11%)
Query: 177 EEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK---LYV 233
E++ +A+ K + P L+ L + +A V+R+ GV CQ+ L +++ + + Y
Sbjct: 144 EDLSSAQKSKYSPIPLLSALRQLPSA-VERVGLVGVACQMHGLYNLQDLIPAYRKLQFYK 202
Query: 234 LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQD--YKVHLKHLDGHIEEVPYFCLPA 291
+G C T +D K A +EP T L + Q Y + E+
Sbjct: 203 IGLICDRTMTAAAIDYMGKLAGNEPLTNLTWRDKQQPAYPGNPVVKTASGREITLQAAQR 262
Query: 292 NDLVDVIAP-SCYSCFDYTNALADLVV----GYMGVPKYTGISMTQHPQYITVRNERGKE 346
++ D P C CFD N ADL + G GV + G S+ + VR + G+
Sbjct: 263 MEIKDFFTPVRCRLCFDKLNVFADLTLGDPHGIKGVDRQGGESV------VLVRADTGRR 316
Query: 347 MLS-----LVKNLLEITPTISSGDRRPFVMETVKADDNAKM--GRGPSQPAPKF 393
+++ V +L EI P ++ ++ +E + A M G +P P+F
Sbjct: 317 LITDAVHQGVVSLREIAPEEATKGQK---IEQKRGQWAAAMEAWAGMGRPLPRF 367
>gi|319793738|ref|YP_004155378.1| coenzyme f420 hydrogenase/dehydrogenase beta subunit
domain-containing protein [Variovorax paradoxus EPS]
gi|315596201|gb|ADU37267.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Variovorax paradoxus EPS]
Length = 470
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 90/227 (39%), Gaps = 19/227 (8%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSP-NLNT 195
G+V+ A E+L+TG V+AV V +RL R L+RTP+E+ A G K P ++
Sbjct: 121 GMVSWTAGELLRTGAVDAVAHVAPADGERLF-RYRLSRTPDEL--AAGAKSRYYPVEMSE 177
Query: 196 LALVEAAGVKRLLFCGVGC---QVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLK 252
+ R GV C VQ LR + + + LG C + ++ F
Sbjct: 178 VLETIRREPGRYAVVGVPCFVKAVQLLRREDPVMRERIVATLGLFCGHMKSTRLIESFAL 237
Query: 253 AASSEPETVLHYEF--------MQDYKVHLKHLDGHIEEVPYFCLPANDLVDVI--APSC 302
+ V +F Y H + DG + +F L D +C
Sbjct: 238 QMAVPMAEVRGVDFRLKNAQRPANWYTAHFELRDGRTVQRDWFHLAEGDWGSGFFQNEAC 297
Query: 303 YSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 349
C D + AD+ G V YT S + + VR+ R + M++
Sbjct: 298 NFCDDVVSETADIAFGDAWVEPYT--SDGRGTNVVIVRSARMQAMVA 342
>gi|15678308|ref|NP_275423.1| coenzyme F420-reducing hydrogenase subunit beta-like protein
[Methanothermobacter thermautotrophicus str. Delta H]
gi|2621331|gb|AAB84786.1| coenzyme F420-reducing hydrogenase, beta subunit homolog
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 689
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 42/256 (16%)
Query: 118 HEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPE 177
EE+LY R T Q G+VT+ +++ ++ + V + + P ++ ++ +
Sbjct: 141 REEILYGRGTAR---GQDGGVVTSFLRYLMENDRIDGAIVVGHE---KWKPVSLVVQSTD 194
Query: 178 EVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK------- 230
++ A G K ++S L L G++ + + CQ+ LR +++ L K
Sbjct: 195 DLEATSGSKYSIS-TLEALKTASELGLESVAVVALPCQINGLRKLQYFPYLAKHDPELGR 253
Query: 231 ----------LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGH 280
Y++G C + L + L + V ++ + V HLDG
Sbjct: 254 SGRPVKLPEIRYLIGLFCTEKFEYTDLREALMDEGIDISEVKKFDIRRGKMV--VHLDGG 311
Query: 281 IEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVR 340
+ L L D C C D+ LAD+ +G G P G S + +R
Sbjct: 312 ERTIE---LSRIGLCD----GCRLCRDFDAELADVSIGSAGSPD--GYST------VIIR 356
Query: 341 NERGKEMLSLVKNLLE 356
+RG E+ + +LLE
Sbjct: 357 TDRGAEIREAL-DLLE 371
>gi|222444627|ref|ZP_03607142.1| hypothetical protein METSMIALI_00239 [Methanobrevibacter smithii
DSM 2375]
gi|222434192|gb|EEE41357.1| 4Fe-4S binding domain protein [Methanobrevibacter smithii DSM 2375]
Length = 359
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 16/116 (13%)
Query: 234 LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPAN 292
+G C++N + + L ++LK+ E V + + + +L +DG++ F +P
Sbjct: 37 IGLFCMENFSYQYLKRYLKSRDIELFEVKEFRIEKGQFVAYL--IDGNV-----FKIPIA 89
Query: 293 DLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
+ +C+ C DYT+ ++D+ VG +G PKY + VR+++GK+++
Sbjct: 90 ETEPFTRKNCHICTDYTSDVSDISVGSVGSPKYHST--------VIVRSQKGKQII 137
>gi|448329194|ref|ZP_21518495.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Natrinema versiforme JCM
10478]
gi|445614381|gb|ELY68057.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Natrinema versiforme JCM
10478]
Length = 422
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 99/254 (38%), Gaps = 25/254 (9%)
Query: 116 GVHEELLYARKTK--PVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
G+ + YA + E Q G+VT + E+++ G ++ V + D+ L VLA
Sbjct: 117 GLEQPATYAARADDTAAEAGQDGGVVTALLAELIEAGELDGAVVAREREDEPLRGEAVLA 176
Query: 174 RTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVK----RLLFCGVGCQVQ---ALRSVEHH 225
+ E++L A G + L + L+ A ++ L G C VQ AL +H
Sbjct: 177 TSREDLLEAGGSIYNQTMGLGKIDELLAEADLETDDPDLALVGTPCMVQGATALDRYDHE 236
Query: 226 LNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGH-IEEV 284
+ C + + L L++ +PE V + + D + DG + E
Sbjct: 237 PADPIALTVALMCTRSFEHDRLLARLESFDVDPEAVDGLD-ISDGTLRAVDADGDALLEA 295
Query: 285 PYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERG 344
A L C C D+ AD+ VG +G P + ++ VR E G
Sbjct: 296 DVDAFDAAGLR-----GCDECADFVGEAADISVGSVGSPDGSTTAV--------VRTEAG 342
Query: 345 KEMLSLVKNLLEIT 358
+ + + LE T
Sbjct: 343 ESAWNRAASALETT 356
>gi|395646623|ref|ZP_10434483.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanofollis liminatans DSM 4140]
gi|395443363|gb|EJG08120.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanofollis liminatans DSM 4140]
Length = 341
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 95/259 (36%), Gaps = 27/259 (10%)
Query: 110 LDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPR 169
+ T LG + E + AR T V G Q G VT I L G+++AVV V D +
Sbjct: 74 VSSTLLGEYLEAITARATFAVPGKQSGGAVTAILAHALDAGLIDAVVTVSEDHWTKKPAS 133
Query: 170 PVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKR----LLFCGVGCQVQALRSVEHH 225
V+ R V A P L AL EA V++ + R E
Sbjct: 134 TVITRREVLVAQAGSRYNWWVPMLA--ALKEAVIVRKYRRVAVVAVPCAAAAVARMRESD 191
Query: 226 LNLEKLY------VLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYKVHLKHL 277
+L Y ++G C ++ L K EP V + K+ +
Sbjct: 192 FDLLAPYGRAVRLLVGLFCTESFDYGKLMEGKIRGELGIEPWEVSRLDVKG--KLEVTTT 249
Query: 278 DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYI 337
DG + ++P DL I C+ C D+ AD+ G +G P+ + + P
Sbjct: 250 DGRVLDIPL-----KDLEACIPSGCHHCTDFAAVAADISAGAVGSPQGYTTLLVRTP--- 301
Query: 338 TVRNERGKEMLSLVKNLLE 356
RG +L LLE
Sbjct: 302 ---TGRGFVESALAAGLLE 317
>gi|288932072|ref|YP_003436132.1| Coenzyme F420 hydrogenase [Ferroglobus placidus DSM 10642]
gi|288894320|gb|ADC65857.1| Coenzyme F420 hydrogenase [Ferroglobus placidus DSM 10642]
Length = 356
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 163 DDRLSPRPVLARTPEEVLAAK--GVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALR 220
D+ P V R+ EE+ + G K + +P + L + ++ F G C + LR
Sbjct: 140 DEMFRPYVVHVRSAEELYDTRITGTKYSFAPVMPELHRI-IKRFDKIGFIGTPCMISGLR 198
Query: 221 SVEHHLNLEKLYV---LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQ-DYKVHLKH 276
++ + L + V +G C +N L FLK+ ++ + + + + ++ V K
Sbjct: 199 KLQKKVPLYEKRVRLAVGLFCTENFYWHQLYDFLKSRGADLKNAVKTDITKGNFIVTFK- 257
Query: 277 LDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMG 321
DG F +P ++ ++ C+ C D++ AD+ VG +G
Sbjct: 258 -DGS-----EFVIPVKEMEPIVPEGCHVCQDFSAVEADVSVGSVG 296
>gi|313122736|ref|YP_004044663.1| coenzyme F420-reducing hydrogenase, beta subunit [Halogeometricum
borinquense DSM 11551]
gi|448285138|ref|ZP_21476386.1| coenzyme F420-reducing hydrogenase, beta subunit [Halogeometricum
borinquense DSM 11551]
gi|312296218|gb|ADQ69307.1| coenzyme F420-reducing hydrogenase, beta subunit [Halogeometricum
borinquense DSM 11551]
gi|445577356|gb|ELY31790.1| coenzyme F420-reducing hydrogenase, beta subunit [Halogeometricum
borinquense DSM 11551]
Length = 548
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 102/249 (40%), Gaps = 40/249 (16%)
Query: 131 EGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG--VKPT 188
E AQ G+VT++ I +L+ G ++ + D+ LA TPEE++ G T
Sbjct: 261 ENAQDGGLVTSVLIHLLEAGEIDGAIIATESADEPWKAESFLATTPEELIENAGSFYNQT 320
Query: 189 LS-PNLNTLALVEAAGVK-----RLLFCGVGCQVQALRSVE----HHLNLEK-----LYV 233
++ NLN E K L G C+++ +R+++ + + E Y
Sbjct: 321 MALGNLNVDQWAEKLPEKDPEALSLALVGTPCEIEGIRALQDFAWDYASQEDGIRAIDYT 380
Query: 234 LGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQ-DYKVHLKHLDGHI---EEVPYF 287
+ C N E L ++ +P+ + + + D V+ + DG + E++ F
Sbjct: 381 IALMCTKNFNYERLIGEQLEAKRGIDPDDIGKMDVLHGDMLVYDR--DGEMILQEDIEAF 438
Query: 288 CLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEM 347
A C C D+T ADL VG +G +G + + VR E+G +
Sbjct: 439 HGAA-------LKGCDECADFTGYCADLTVGSVG----SGDEYSS----VIVRTEQGLKA 483
Query: 348 LSLVKNLLE 356
L + L+
Sbjct: 484 WELTEPDLD 492
>gi|148642195|ref|YP_001272708.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanobrevibacter smithii ATCC 35061]
gi|148551212|gb|ABQ86340.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanobrevibacter smithii ATCC 35061]
Length = 359
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 16/116 (13%)
Query: 234 LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPAN 292
+G C++N + + L ++LK+ E V + + + +L +DG++ F +P
Sbjct: 37 IGLFCMENFSYQYLKRYLKSRDIELFEVKEFRIEKGQFVAYL--IDGNV-----FKIPIA 89
Query: 293 DLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
+ +C+ C DYT+ ++D+ VG +G PKY + VR+++GK+++
Sbjct: 90 ETEPFTRKNCHICTDYTSDVSDISVGSVGSPKYHST--------VIVRSQKGKQII 137
>gi|354598205|ref|ZP_09016222.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Brenneria sp. EniD312]
gi|353676140|gb|EHD22173.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Brenneria sp. EniD312]
Length = 404
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 113/269 (42%), Gaps = 23/269 (8%)
Query: 97 ETVVHGRGRRKDSLDDTYLGVHEELLYARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEA 154
E + GR R + +LG+H AR T+ E + G VTT+ + + V+
Sbjct: 70 EMRLFGRTREPS---ERWLGIHINHFGARSTRTDVFEASASGGTVTTLLLASREALGVDH 126
Query: 155 VVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVG 213
V+ + DP + V+AR E ++A L+P L L L E ++ G+
Sbjct: 127 VLTMGRDPHAGWRAKGVVARDEETIIANAQSTYQLTPYLAELRGLYEHCRDDKIAVVGLA 186
Query: 214 CQVQALRSVEH------HLNLEKL-YVLGTNC----VDNGTREGLDKFLKAASSEPETVL 262
C +QA+R ++ E + +++ T C + GT + + L + +
Sbjct: 187 CHMQAIRKLQQLQGDIADWARENIAFLVETACSSSTLPKGTIDIIQGRLGLSLDTVNDIR 246
Query: 263 HYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGV 322
+ K+ + DG + ++ + +L C SC D+ + LAD+ V G
Sbjct: 247 YRSGPYPGKLIVSTADGDRHSLEFWQI-LKELKGGKNHRCLSCGDWMSGLADISV-CDGD 304
Query: 323 PKYTGISM--TQHPQY--ITVRNERGKEM 347
P S+ T++ +Y + VR RG+ +
Sbjct: 305 PNIFDASLNATKYDKYGRVLVRTPRGQAL 333
>gi|261350833|ref|ZP_05976250.1| coenzyme F420-reducing hydrogenase, beta subunit-like protein
[Methanobrevibacter smithii DSM 2374]
gi|288860451|gb|EFC92749.1| coenzyme F420-reducing hydrogenase, beta subunit-like protein
[Methanobrevibacter smithii DSM 2374]
Length = 359
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 16/116 (13%)
Query: 234 LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPAN 292
+G C++N + + L ++LK+ E V + + + +L +DG++ F +P
Sbjct: 37 IGLFCMENFSYQYLKRYLKSRDIELFEVKEFRIEKGQFVAYL--IDGNV-----FRIPIA 89
Query: 293 DLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
+ +C+ C DYT+ ++D+ VG +G PKY + VR+++GK+++
Sbjct: 90 ETEPFTRKNCHICTDYTSDVSDISVGSVGSPKYHST--------VIVRSQKGKQII 137
>gi|433590057|ref|YP_007279553.1| coenzyme F420-reducing hydrogenase, beta subunit [Natrinema
pellirubrum DSM 15624]
gi|448333826|ref|ZP_21523014.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Natrinema pellirubrum DSM
15624]
gi|433304837|gb|AGB30649.1| coenzyme F420-reducing hydrogenase, beta subunit [Natrinema
pellirubrum DSM 15624]
gi|445621400|gb|ELY74875.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Natrinema pellirubrum DSM
15624]
Length = 420
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 93/250 (37%), Gaps = 22/250 (8%)
Query: 116 GVHEELLYARKT--KPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLA 173
G+ E + YA + + + Q G+VT + E+++ G ++ + + D+ L VLA
Sbjct: 116 GLAEPVTYAARATDEAADAGQDGGVVTALLTELIEAGEIDGAIVAREREDEPLRGEAVLA 175
Query: 174 RTPEEVLAAKGVKPTLSPNLNT----LALVEAAGVKRLLFCGVGCQVQ---ALRSVEHHL 226
+ EE+LAA G + L LA + L G C +Q AL +H
Sbjct: 176 TSREELLAAVGSVYNQTMGLGQVDELLADADLGDDPDLALVGTPCMIQGATALDRYDHEP 235
Query: 227 NLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPY 286
+ C + L L+ +P+ V + + L+ D E +
Sbjct: 236 ADPIALTVALMCTRSFEHSRLVSRLETFDVDPDAV---DTLDISDGQLRATDAGGETLLE 292
Query: 287 FCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKE 346
+ A D + C C D+ AD+ VG +G P + VR E G+
Sbjct: 293 TDVDAFDAAGLRG--CDECADFVGGAADISVGNVGSP--------DGETTVVVRTETGES 342
Query: 347 MLSLVKNLLE 356
LE
Sbjct: 343 AWETAAPDLE 352
>gi|312137324|ref|YP_004004661.1| coenzyme f420 hydrogenase [Methanothermus fervidus DSM 2088]
gi|311225043|gb|ADP77899.1| Coenzyme F420 hydrogenase [Methanothermus fervidus DSM 2088]
Length = 358
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 19/186 (10%)
Query: 202 AGVKRLLFCGVGCQVQALRSVEHH-----LNLEKLYVLGTNCVDNGTREGLDKFLKAASS 256
G ++ G CQ+ A +E + N +G C++N + E L K L +
Sbjct: 2 GGEDKIAMVGTPCQIIAATLMEKYSSQLKRNFPIDIKIGLFCMENFSYEYLKKLLHSYG- 60
Query: 257 EPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLV 316
+ + + ++ + H+ +P + L + SC C D+T+ LAD+
Sbjct: 61 -----IKFRDVVSCRIEGSNAYFHLINKDVVSIPLSTLRKSMRKSCKICMDFTSELADIS 115
Query: 317 VGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKA 376
VG +G PK G S + +R+E+G +++ K I + DR + + K
Sbjct: 116 VGSVGSPK--GWST------VIIRSEKGLKLVEKAKKAKYIETKMLDADRLNLIEKLAKI 167
Query: 377 DDNAKM 382
N +
Sbjct: 168 KKNKNL 173
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 111 DDTY--LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
+D Y LG + E++ AR P Q G+VT + L +V V+ V DP+ P
Sbjct: 271 EDAYSALGNYIEIISARS--PFFKGQDGGVVTALLACALSEKIVNKVLIVDKDPEKPWKP 328
Query: 169 RPVLARTPEEVLAAKGVKPTLSPNLNTL 196
P+L ++V+ A G K ++ P L
Sbjct: 329 LPILTDKIDDVVKASGTKYSVCPIFKAL 356
>gi|421617458|ref|ZP_16058447.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Pseudomonas stutzeri KOS6]
gi|409780613|gb|EKN60240.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Pseudomonas stutzeri KOS6]
Length = 308
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 90/220 (40%), Gaps = 10/220 (4%)
Query: 138 IVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLA 197
+++ +A L+ +V+ V+ +Q+ D L ++R+ + ++A+ G + + L
Sbjct: 1 MISALAQYCLEHKLVDGVIQIQASQTDPLENVATISRSRQNIIASSGSRYAPASPGEALK 60
Query: 198 LVEAAGVKRLLFCGVGCQVQALRSVEHH---LNLEKLYVLGTNCVDNGTREGLDKFLKAA 254
V A ++ LF G C V A+R ++ + L Y++ C + +G ++ L
Sbjct: 61 WV-AMSTEKYLFIGKPCDVAAVRQMQQYDPRLKDNIPYIVSFMCAGTPSLQGTEQVLDKL 119
Query: 255 SSEPETVLHYEFMQDYKVHLKHL---DGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNA 311
E + V + + D L +G + Y L + C C D
Sbjct: 120 EVERKDVTAFRYRGDGWPGLTKATLNNGDERTMTYNDSWGKVLNRHLQTRCKICPDGIGE 179
Query: 312 LADLVV--GYMGVPK-YTGISMTQHPQYITVRNERGKEML 348
AD+V G+ G K Y + I VR +G+++
Sbjct: 180 FADIVCADGWEGDEKGYPSFEEREGNSLILVRTAKGRDLF 219
>gi|333978791|ref|YP_004516736.1| coenzyme F420 hydrogenase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333822272|gb|AEG14935.1| Coenzyme F420 hydrogenase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 405
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 106/279 (37%), Gaps = 32/279 (11%)
Query: 96 LETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPVE---GAQWTGIVTTIAIEMLKTGMV 152
LE V GR R + D LG + E T V GA G+VT + I L+ G++
Sbjct: 70 LEQFVFGRVREEQIPD---LGFYREARVGWATDRVTRQLGAS-GGLVTALLIYALEKGII 125
Query: 153 EAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGV 212
+ + D LA E++LAA K P L G +RL G+
Sbjct: 126 DGALVAGFRQDLPWRTEARLAVNGEQLLAAARSKYACVPVNTLLNQALEQGYRRLAVVGL 185
Query: 213 GCQVQALRSVEHH-----LNLEKLYVLGTNCVDN----GTREGLDKFLKAASSEPETVLH 263
C + LR ++ + L + ++G C GTR L + L E L
Sbjct: 186 PCHIHGLRKMQFYGQPASLTRGVVLMVGLFCASQFYFEGTRHLLVERLGVDRLEDIASLS 245
Query: 264 Y---EFMQDYKVHLKH-----LDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADL 315
Y ++ V LK LD H E + + +PA C C D+ LADL
Sbjct: 246 YRGGDWPGHLVVELKDGRRLLLDRH-EYMYHHLMPAFK-----RDRCEMCVDWAAELADL 299
Query: 316 VVGYMGVPKYTGISMTQHPQYITVRNERGKEML-SLVKN 353
VG P+ VR+ G+E+L VKN
Sbjct: 300 SVGDYWDPQVRA-GHALGTSSCLVRSPAGEELLDGAVKN 337
>gi|448420299|ref|ZP_21581061.1| coenzyme F420-reducing hydrogenase subunit beta [Halosarcina
pallida JCM 14848]
gi|445673917|gb|ELZ26472.1| coenzyme F420-reducing hydrogenase subunit beta [Halosarcina
pallida JCM 14848]
Length = 561
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 95/254 (37%), Gaps = 54/254 (21%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGV------- 185
AQ G+VT++ I +L+ G ++ + ++ LA TP E++ + G
Sbjct: 275 AQDGGVVTSVLIHLLEAGEIDGALVATESDEEPWKAESFLATTPAELIESAGSFYNQTMA 334
Query: 186 ------------KPTLSPNLNTLALV----EAAGVKRLLFCG--VGCQVQALRSVEHHLN 227
P SP +LALV E G++ L G Q +R+++
Sbjct: 335 LGNLGVEQWEEKLPDKSPEDLSLALVGTPCEIEGIRALQDFGWDYASQEDGVRAID---- 390
Query: 228 LEKLYVLGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI---E 282
Y + C N L ++ + PE + + + D K+ DG + E
Sbjct: 391 ----YTIALMCTKNFNYHRLIGEQLAEKRDLPPEDIGKLDVL-DGKLMAYDHDGRMILEE 445
Query: 283 EVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNE 342
+V F A C C D+T ADL VG +G + + VR E
Sbjct: 446 DVEAFHGAA-------LKGCDECADFTGYCADLTVGSVG--------SSDEYSSVIVRTE 490
Query: 343 RGKEMLSLVKNLLE 356
RG E L + L+
Sbjct: 491 RGMEAWELTEPDLD 504
>gi|423119235|ref|ZP_17106919.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5246]
gi|376399166|gb|EHT11786.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5246]
Length = 521
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 72/191 (37%), Gaps = 28/191 (14%)
Query: 273 HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQ 332
++ LDG E Y+ L SC++C D AL + V + K+T I
Sbjct: 111 QIRDLDGDFEFETYYSL-----------SCHNCPDVVQALNLMAVLNPRI-KHTAIDGGT 158
Query: 333 HPQYITVRN--------ERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKAD--DNAKM 382
IT RN G+E L EI + +G + E K D D +
Sbjct: 159 FQNEITDRNVMGVPAVFMNGQEFGQGRMTLAEIVAKVDTGAEKRAAEELSKRDAYDVLIV 218
Query: 383 GRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRA---DK 439
G GPS A L+G + F LD I NY+ V + G+K A
Sbjct: 219 GSGPSGAAAAVYSARKGIRTGLMGER---FGGQVLDTVDIENYISVPKTEGQKLAGALKA 275
Query: 440 HMPSYAKKIVE 450
H+ YA +++
Sbjct: 276 HVSDYAVDVID 286
>gi|159046658|ref|YP_001542327.1| hypothetical protein Dshi_4135 [Dinoroseobacter shibae DFL 12]
Length = 440
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 107/280 (38%), Gaps = 27/280 (9%)
Query: 61 AKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRI-----------EGLETVVHGRGRRKDS 109
A D C+ CG C + IA K A + G R + + + G G+R +
Sbjct: 31 AGDLCAGCGGCAS--IAPDKLRMALVEPGFLRPVQSAPLSPVEEDTIAAICPGLGQRVED 88
Query: 110 LDDT---YLGVHEELLYARKTKP---VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPD 163
T G + E+ T P G+ G ++ + +L+TG V+ V+ + P
Sbjct: 89 AGRTPSVLWGPYLEMQTGWATDPDLRFAGSS-GGALSMLLCHLLETGAVDGVIQTAAAPQ 147
Query: 164 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSV 222
+ VL+ E VLAA G + S L L A + A+ +R F G C V ALR++
Sbjct: 148 LSIGNGTVLSTRSEGVLAAAGSRYAPSAPLEGLHARLTASPAQRFAFVGKPCDVAALRAL 207
Query: 223 EHH---LNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYK---VHLKH 276
+ L +L C + G + L A + + + + + +
Sbjct: 208 QEQDPGLAARVPVLLSFFCAGVPSLRGGLEVLAALEAPYQDTVAFRYRGNGWPGYATATL 267
Query: 277 LDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLV 316
DG ++ Y L + C C D T ADLV
Sbjct: 268 ADGTTRQMSYHDSWGRILSRHVQHRCKICADGTGTAADLV 307
>gi|448375138|ref|ZP_21558778.1| coenzyme F420-reducing hydrogenase subunit beta [Halovivax
asiaticus JCM 14624]
gi|445659157|gb|ELZ11966.1| coenzyme F420-reducing hydrogenase subunit beta [Halovivax
asiaticus JCM 14624]
Length = 463
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 93/245 (37%), Gaps = 34/245 (13%)
Query: 132 GAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSP 191
GAQ G+VT+I +L G ++ + ++ LA T EE++ + G +
Sbjct: 176 GAQDGGVVTSILSHLLAAGEIDGALVATESDENPWKAESFLATTREELIESAGSFYNQTM 235
Query: 192 NLNTLALV--------EAAGVKRLLFCGVGCQVQALRSVEH-HLNLEKL--------YVL 234
L L L E L G C+++ +R+++ +L+ Y +
Sbjct: 236 ALGNLDLSQWEHKLPDEEPEDLSLAVVGTPCEIEGIRALQDFDWDLQAQEAGLRAVEYRI 295
Query: 235 GTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQ-DYKVHLKHLDGHIEEVPYFCLPA 291
C N + L ++ P+ + + ++ + +V+ LD + E
Sbjct: 296 ALMCTKNFNYQRLLGEELESKRGISPDEIGKMDVIEGEMRVYDDELDLLLAE------DV 349
Query: 292 NDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLV 351
D D C C D+T ADL VG +G + + VR ERG + L
Sbjct: 350 ADFHDATLKGCDECADFTGYTADLTVGSVG--------SSDAFSSVIVRTERGLQAWELA 401
Query: 352 KNLLE 356
+ LE
Sbjct: 402 EPDLE 406
>gi|78042916|ref|YP_360195.1| coenzyme F420 hydrogenase subunit beta [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995031|gb|ABB13930.1| coenzyme F420 hydrogenase, beta subunit [Carboxydothermus
hydrogenoformans Z-2901]
Length = 400
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 124/310 (40%), Gaps = 48/310 (15%)
Query: 62 KDHCSRCGLCDTYYIAHVKDACAFLGDGMSRIEGLETVVHGRG-RRKDSLDDTYLGVHEE 120
+D CS CG+C + I D + LE H G R +L D
Sbjct: 47 RDKCSECGIC--FRICPGSD-----------VPLLEFEKHFFGSNRNPTLTDLGFYRGSY 93
Query: 121 LLYA-RKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEV 179
+ YA + ++GA G+VT + + L+ G+++ + + + LA++ +E+
Sbjct: 94 VGYAGEEIIRIKGAS-GGVVTALLVYALEKGIIDCAIVAGFNKEKPWLTEAKLAKSKKEI 152
Query: 180 LAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH-----LNLEKLYVL 234
+ A K + P AG +R+ G+ C + A+R ++++ + + +
Sbjct: 153 IDAAQSKYAVVPVNMLFREAVKAGCQRVGIVGLPCHIHAVRKMQYYDIPRDIAGKIKLAI 212
Query: 235 GTNCVDN----GTREGLDKFLKAASSEPETVLHY---EFMQDYKVHLKHLDGHI----EE 283
G C GTR L ++ E L Y E+ + V L H D I
Sbjct: 213 GLFCASQFYFEGTRHILVEWCGVDDMEEIANLEYRGGEWPGHFVVKL-HSDKTITIDRHR 271
Query: 284 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVG-YMGVP----KYTGISMTQHPQYIT 338
Y L N D C C D+++ LAD+ VG Y P ++G S +
Sbjct: 272 YVYHMLMPNYKRD----RCEMCIDWSSELADIAVGDYWASPTIGDNFSGTSA------LL 321
Query: 339 VRNERGKEML 348
VR+ G+E++
Sbjct: 322 VRSLPGEELI 331
>gi|20093760|ref|NP_613607.1| coenzyme F420-reducing hydrogenase, beta subunit [Methanopyrus
kandleri AV19]
gi|19886667|gb|AAM01537.1| Coenzyme F420-reducing hydrogenase, beta subunit [Methanopyrus
kandleri AV19]
Length = 377
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 14/231 (6%)
Query: 124 ARKTKP--VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLA 181
AR + P V+ A G+VT + L+ +V+ VVCV+ D L RP++ P EV +
Sbjct: 14 ARSSDPDTVKEAACGGVVTELLRHALREDLVDVVVCVERGA-DALDGRPIVVDDPAEVPS 72
Query: 182 AK-GVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQAL-RSVEHHL-NLEKLYVLGTNC 238
PT L E ++ + C C + L R E L N +++Y +G NC
Sbjct: 73 GSYHCAPTQLARLVAELHREDPTLRVAVTCR-PCDARTLDRLAERDLVNPDRVYRIGLNC 131
Query: 239 VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVI 298
+ + L+ +P V E ++ + V ++ DG EE+ +
Sbjct: 132 GGTFEPRVVLEILEEHGVDPLDVEREEVVKGHLV-IELRDG--EEISVSIDELEEQDSGR 188
Query: 299 APSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 349
+C C + ADL G GVP + ++ V+ E G+++L+
Sbjct: 189 RENCRRCDENIPERADLACGNWGVPD----DLQGEWTFVEVKTEDGRDLLA 235
>gi|251736475|gb|ABV95846.2| coenzyme F420 hydrogenase/dehydrogenase, beta subunit
[Dinoroseobacter shibae DFL 12]
Length = 433
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 107/280 (38%), Gaps = 27/280 (9%)
Query: 61 AKDHCSRCGLCDTYYIAHVKDACAFLGDGMSRI-----------EGLETVVHGRGRRKDS 109
A D C+ CG C + IA K A + G R + + + G G+R +
Sbjct: 24 AGDLCAGCGGCAS--IAPDKLRMALVEPGFLRPVQSAPLSPVEEDTIAAICPGLGQRVED 81
Query: 110 LDDT---YLGVHEELLYARKTKP---VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPD 163
T G + E+ T P G+ G ++ + +L+TG V+ V+ + P
Sbjct: 82 AGRTPSVLWGPYLEMQTGWATDPDLRFAGSS-GGALSMLLCHLLETGAVDGVIQTAAAPQ 140
Query: 164 DRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTL-ALVEAAGVKRLLFCGVGCQVQALRSV 222
+ VL+ E VLAA G + S L L A + A+ +R F G C V ALR++
Sbjct: 141 LSIGNGTVLSTRSEGVLAAAGSRYAPSAPLEGLHARLTASPAQRFAFVGKPCDVAALRAL 200
Query: 223 EHH---LNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYK---VHLKH 276
+ L +L C + G + L A + + + + + +
Sbjct: 201 QEQDPGLAARVPVLLSFFCAGVPSLRGGLEVLAALEAPYQDTVAFRYRGNGWPGYATATL 260
Query: 277 LDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLV 316
DG ++ Y L + C C D T ADLV
Sbjct: 261 ADGTTRQMSYHDSWGRILSRHVQHRCKICADGTGTAADLV 300
>gi|384921646|ref|ZP_10021620.1| hypothetical protein C357_20872 [Citreicella sp. 357]
gi|384464492|gb|EIE49063.1| hypothetical protein C357_20872 [Citreicella sp. 357]
Length = 422
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 106/271 (39%), Gaps = 24/271 (8%)
Query: 95 GLETVVHGRGRRKDSLDDTYLGVHEELLYARKTKPV---EGAQWTGIVTTIAIEMLKTGM 151
GL V RR D+L ++ ++ T P GA G ++ + +L +G
Sbjct: 68 GLGQTVDAGTRRDDALWGPWI----DMQMGHATDPALRHAGAS-GGALSGLLAHLLDSGA 122
Query: 152 VEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEA-----AGVKR 206
V+AV+ + ++ VLAR+ +++ AA G + +P+ AL +A A +R
Sbjct: 123 VDAVIETAASDAVPVANDTVLARSRDDIRAAAGSR--YAPSAPLAALPDALADHRASGRR 180
Query: 207 LLFCGVGCQVQALRSVEH---HLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLH 263
F G C V ALR+++ L +L C +++G L A + + +
Sbjct: 181 FAFVGKPCDVAALRAMQTGDPELRTAIPVLLSFFCAGVPSQDGARALLSALDAPEDRLRS 240
Query: 264 YEFMQD---YKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVG-- 318
+ + + + + DG + Y L + C C D T AD+
Sbjct: 241 FRYRGNGWPGQATAQLDDGSERSMSYHNSWGGILSKHVQHRCKVCADGTGTAADIAFADA 300
Query: 319 -YMGVPKYTGISMTQHPQYITVRNERGKEML 348
Y S I VR++ G+ +L
Sbjct: 301 WEADARGYPVFSEAPGQSLIVVRSDTGQRLL 331
>gi|333987083|ref|YP_004519690.1| coenzyme F420 hydrogenase [Methanobacterium sp. SWAN-1]
gi|333825227|gb|AEG17889.1| Coenzyme F420 hydrogenase., Hydrogensulfite reductase
[Methanobacterium sp. SWAN-1]
Length = 686
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 100/252 (39%), Gaps = 48/252 (19%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
Q G VT +L ++ + V D+ P ++ + E++L K ++S
Sbjct: 152 GQDGGAVTAFLKHLLDINKIDGAIVV---GDEHWKPVSLIVQDAEDLLQTSKSKYSIS-T 207
Query: 193 LNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEK-----------------LYVLG 235
L L G++++ + CQ+ LR +++ L K Y++G
Sbjct: 208 LEALKTAGEMGLQKVAVVALPCQINGLRKLQYFPYLAKHEEELGKSGKPAKLPKIEYLIG 267
Query: 236 TNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVH--LKHLDGHIEEVPYFCLPAND 293
C + + + LK S + + D K+ L +++G +++ D
Sbjct: 268 LFCTEKFDYGNIKEILKDNSINIKDAEKF----DVKMGKLLVYVNGEEKKI--------D 315
Query: 294 LVDV-IAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVK 352
L + + C C D+ LAD+ +G G P G S I +R E+G+E +K
Sbjct: 316 LKKIELCSGCNMCRDFDAELADVSIGSTGSP--NGYST------IIIRTEKGEE----IK 363
Query: 353 NLLEITPTISSG 364
N LE+ + G
Sbjct: 364 NALELKEGVDVG 375
>gi|289192916|ref|YP_003458857.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanocaldococcus sp. FS406-22]
gi|288939366|gb|ADC70121.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanocaldococcus sp. FS406-22]
Length = 261
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 96/229 (41%), Gaps = 15/229 (6%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
AQ G TT+ L+ G+++AVV V D P LA TP E+L + K ++SPN
Sbjct: 14 AQDGGFTTTLLSYCLENGILDAVVVV---GDKNWKPVAYLATTPTELLKSTKSKYSISPN 70
Query: 193 LNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLK 252
N L ++ G+ C + L ++ +L L+ +G C N E + +K
Sbjct: 71 -NKLLEYATENYDKVGLVGLPCHI--LGGLQFNLTLK----VGLFCTKNFYYETIKNIIK 123
Query: 253 AASSEPETVLHYEFMQDYKVHLKHLD----GHIEEVPYFCLPANDLVDVIAPSCYSCFDY 308
+ + K ++ L E+V Y +P ++ + C C D+
Sbjct: 124 ERLGLNMDEVSKMNITKGKFVVETLKKKGFAGTEKVVYE-IPIKEIEKLCNLGCRVCTDF 182
Query: 309 TNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEI 357
+ AD+ VG +G + ++ + NE ++ L VK ++I
Sbjct: 183 SAKYADVSVGSVGSEDGWNTVIIRNKMVEDIINEMVEKGLIEVKETVDI 231
>gi|410091293|ref|ZP_11287864.1| glycolate oxidase iron-sulfur subunit [Pseudomonas viridiflava
UASWS0038]
gi|409761387|gb|EKN46459.1| glycolate oxidase iron-sulfur subunit [Pseudomonas viridiflava
UASWS0038]
Length = 408
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 20/138 (14%)
Query: 169 RPVLARTPEEVLAAKG-VKPTLSPNLN--TLALVEAAGVKRLLFCGVGCQVQALRSVEHH 225
RPV R +VL +G V+P LSPN N T +++ G+ GC +V++H
Sbjct: 161 RPV-TRQARQVLMLEGCVQPALSPNTNAATARVLDRLGISVTPISEAGC----CGAVDYH 215
Query: 226 LNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHY-----EFMQDYKVHLKHLDGH 280
LN ++ + +G R +D + A + ++++ F++DY L+H +
Sbjct: 216 LNAQEAGL-------DGARRNIDAWWPAIEAGAQSIVQTASGCGAFVKDYGHLLRHDPTY 268
Query: 281 IEEVPYFCLPANDLVDVI 298
E+ A DLV+V+
Sbjct: 269 AEKAAQVSAKARDLVEVL 286
>gi|150403004|ref|YP_001330298.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Methanococcus
maripaludis C7]
gi|150034034|gb|ABR66147.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanococcus maripaludis C7]
Length = 359
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 97/234 (41%), Gaps = 30/234 (12%)
Query: 124 ARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAK 183
A+ T + Q G+VT I G+++ + + D + P+ LA + E+VL
Sbjct: 106 AKSTLETKNIQSGGVVTAILANAFDEGLIDGAIVMLEDKW-TMDPKSYLATSKEDVLKTA 164
Query: 184 GVKPTLS-PNLNTLALVEAAGVKRL---LFCGVGCQVQALRS--------VEHHLNLEKL 231
G + + P L L EA VK+L G C + A+ VE +L
Sbjct: 165 GSRYNWNVPILEVLK--EAVMVKKLNKLAIVGTPCVINAVYHMMATSNDLVEPFKEAIRL 222
Query: 232 YVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPA 291
V C + + + K +K P + E + K+ + + G++ F +
Sbjct: 223 KV-ALFCFETFDYDKMLKKIKELDVNPWDIKKME-IDKGKLIVSTIHGNV-----FSIKI 275
Query: 292 NDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGK 345
++L ++ C C D+T +D+ VG +G P+ G S + +RN+ GK
Sbjct: 276 DELDGMVRKGCKVCRDFTGISSDISVGNVGTPE--GYST------VLIRNKWGK 321
>gi|15668906|ref|NP_247710.1| coenzyme F420-reducing hydrogenase subunit beta [Methanocaldococcus
jannaschii DSM 2661]
gi|2496111|sp|Q58135.1|Y725_METJA RecName: Full=Uncharacterized protein MJ0725
gi|1591441|gb|AAB98721.1| coenzyme F420-reducing hydrogenase, beta subunit
[Methanocaldococcus jannaschii DSM 2661]
Length = 261
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 19/231 (8%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
AQ G TT+ L+ G+++AVV V D P LA TP E+L + K ++SPN
Sbjct: 14 AQDGGFTTTLLSYCLENGILDAVVVV---GDKNWKPVAYLATTPTELLKSTKSKYSISPN 70
Query: 193 LNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLK 252
N L ++ G+ C + L ++ L L+ +G C N + + +K
Sbjct: 71 -NKLLEYATENYDKVGLVGLPCHI--LGGLQFDLTLK----VGLFCTKNFYYDTIKSIIK 123
Query: 253 AA------SSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCF 306
+ +F+ + + K G E+V Y +P ++ + C C
Sbjct: 124 ERFGVNIDEVAKMNITKGKFVVE-TLKKKGFAGT-EKVVYE-IPIKEIEKLCNLGCRVCT 180
Query: 307 DYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLSLVKNLLEI 357
D++ AD+ VG +G + ++ + NE ++ L VK ++I
Sbjct: 181 DFSAKYADVSVGSVGSEDGWNTVIVRNKMVEDIINEMAEKGLIEVKETVDI 231
>gi|88603093|ref|YP_503271.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Methanospirillum hungatei JF-1]
gi|88188555|gb|ABD41552.1| formate dehydrogenase, beta subunit (F420) [Methanospirillum
hungatei JF-1]
Length = 425
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 131 EGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG---VKP 187
E A G+VT + + +L +G V+AV +Q +D PRPV+ PE++ A G
Sbjct: 17 EHAASGGVVTGLLMSLLSSGTVDAVCALQMG-EDIYDPRPVIITDPEKIPACSGSLFCGS 75
Query: 188 TLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSV--EHHLNLEKLYVLGTNC 238
L+ + A+ G+K + GC + + + + L+ + LY++G NC
Sbjct: 76 ILTADWVVSAVQATPGMK-IAAVVKGCDAKVIVELVKRNILDRDDLYLIGLNC 127
>gi|421726096|ref|ZP_16165273.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca M5al]
gi|410373063|gb|EKP27767.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca M5al]
Length = 521
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 79/209 (37%), Gaps = 37/209 (17%)
Query: 255 SSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALAD 314
S E +T+L ++++DG E Y+ L SC++C D AL +
Sbjct: 102 SKEAQTLLE---------QIRNIDGDFEFETYYSL-----------SCHNCPDVVQAL-N 140
Query: 315 LVVGYMGVPKYTGISMTQHPQYITVRN--------ERGKEMLSLVKNLLEITPTISSGDR 366
L+ K+T I + IT RN GKE L EI + +G
Sbjct: 141 LMAVLNPRIKHTAIDGGTYQNEITERNVMGVPAVFMNGKEFGQGRMTLTEIVAKVDTGAE 200
Query: 367 RPFVMETVK--ADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRN 424
+ E K A D +G GPS A L+G + F LD I N
Sbjct: 201 KRAAEELNKREAYDVLIVGSGPSGAAAAVYSARKGIRTGLMGER---FGGQVLDTVDIEN 257
Query: 425 YLHVNRAWGKKRA---DKHMPSYAKKIVE 450
Y+ V + G+K A H+ Y +++
Sbjct: 258 YISVPKTEGQKLAGALKAHVSEYDVDVID 286
>gi|375259622|ref|YP_005018792.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca KCTC
1686]
gi|397656690|ref|YP_006497392.1| alkyl hydroperoxide reductase protein F [Klebsiella oxytoca E718]
gi|402839691|ref|ZP_10888175.1| alkyl hydroperoxide reductase, F subunit [Klebsiella sp. OBRC7]
gi|423101878|ref|ZP_17089580.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5242]
gi|365909100|gb|AEX04553.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca KCTC
1686]
gi|376390704|gb|EHT03387.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5242]
gi|394345246|gb|AFN31367.1| Alkyl hydroperoxide reductase protein F [Klebsiella oxytoca E718]
gi|402287617|gb|EJU36056.1| alkyl hydroperoxide reductase, F subunit [Klebsiella sp. OBRC7]
Length = 521
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 79/209 (37%), Gaps = 37/209 (17%)
Query: 255 SSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALAD 314
S E +T+L ++++DG E Y+ L SC++C D AL +
Sbjct: 102 SKEAQTLLE---------QIRNIDGDFEFETYYSL-----------SCHNCPDVVQAL-N 140
Query: 315 LVVGYMGVPKYTGISMTQHPQYITVRN--------ERGKEMLSLVKNLLEITPTISSGDR 366
L+ K+T I + IT RN GKE L EI + +G
Sbjct: 141 LMAVLNPRIKHTAIDGGTYQNEITERNVMGVPAVFMNGKEFGQGRMTLTEIVAKVDTGAE 200
Query: 367 RPFVMETVK--ADDNAKMGRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRN 424
+ E K A D +G GPS A L+G + F LD I N
Sbjct: 201 KRAAEELNKREAYDVLIVGSGPSGAAAAVYSARKGIRTGLMGER---FGGQVLDTVDIEN 257
Query: 425 YLHVNRAWGKKRA---DKHMPSYAKKIVE 450
Y+ V + G+K A H+ Y +++
Sbjct: 258 YISVPKTEGQKLAGALKAHVSEYDVDVID 286
>gi|423128049|ref|ZP_17115728.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5250]
gi|376395088|gb|EHT07738.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5250]
Length = 521
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 73/191 (38%), Gaps = 28/191 (14%)
Query: 273 HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQ 332
++++DG E Y+ L SC++C D AL +L+ K+T I
Sbjct: 111 QIRNIDGDFEFETYYSL-----------SCHNCPDVVQAL-NLMAVLNPRIKHTAIDGGT 158
Query: 333 HPQYITVRN--------ERGKEMLSLVKNLLEITPTISSGDRRPFVMETVK--ADDNAKM 382
+ IT RN GKE L EI + +G + E K A D +
Sbjct: 159 YQNEITERNVMGVPAVFMNGKEFGQGRMTLTEIVAKVDTGAEKRAAEELNKREAYDVLIV 218
Query: 383 GRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRA---DK 439
G GPS A L+G + F LD I NY+ V + G+K A
Sbjct: 219 GSGPSGAAAAVYSARKGIRTGLMGER---FGGQVLDTVDIENYISVPKTEGQKLAGALKA 275
Query: 440 HMPSYAKKIVE 450
H+ Y +++
Sbjct: 276 HVSEYDVDVID 286
>gi|402773596|ref|YP_006593133.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Methylocystis sp. SC2]
gi|401775616|emb|CCJ08482.1| Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methylocystis sp. SC2]
Length = 488
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 84/216 (38%), Gaps = 37/216 (17%)
Query: 137 GIVTTIAIEMLKTGMVEAV---VCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPNL 193
G+V+ +A+E+L+ G+V+ V VQS P D L+R E+V A G K P
Sbjct: 109 GLVSWVAVELLRRGLVDGVAHIAAVQSPPPDGRLFDYRLSRNVEDVRA--GAKSRYHPVE 166
Query: 194 NTLALVEAAGV-KRLLFCGVGCQVQALRSVEHHLNLEKL---YVLGTNC----------- 238
+ + E R GV C ++A+ + L + ++LG C
Sbjct: 167 LSRVIAEIRETPGRYAVVGVPCFIKAIHLLRRRDPLLRARIAFLLGLFCGHMKSARLGES 226
Query: 239 ------VDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAN 292
V G G+D LK PE ++ Y+ H+ HLDG E ++ L
Sbjct: 227 FAWQLGVPPGRMTGIDYRLK----NPERPANW-----YRAHISHLDGAPREEDWWNLVDG 277
Query: 293 DLVDVI--APSCYSCFDYTNALADLVVGYMGVPKYT 326
D +C C D AD+ G + Y
Sbjct: 278 DWGAGFFQNSACEFCDDVVAETADISFGDAWLEPYA 313
>gi|423107294|ref|ZP_17094989.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5243]
gi|423113172|ref|ZP_17100863.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5245]
gi|376389420|gb|EHT02112.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5243]
gi|376389714|gb|EHT02404.1| alkyl hydroperoxide reductase subunit F [Klebsiella oxytoca
10-5245]
Length = 521
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 73/191 (38%), Gaps = 28/191 (14%)
Query: 273 HLKHLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQ 332
++++DG E Y+ L SC++C D AL +L+ K+T I
Sbjct: 111 QIRNIDGDFEFETYYSL-----------SCHNCPDVVQAL-NLMAVLNPRIKHTAIDGGT 158
Query: 333 HPQYITVRN--------ERGKEMLSLVKNLLEITPTISSGDRRPFVMETVKAD--DNAKM 382
+ IT RN GKE L EI + +G + E K + D +
Sbjct: 159 YQNEITERNVMGVPAVFMNGKEFGQGRMTLTEIVAKVDTGAEKRAAEELNKRESYDVLIV 218
Query: 383 GRGPSQPAPKFVGNLIAFFINLVGPKGLEFARYSLDYHTIRNYLHVNRAWGKKRA---DK 439
G GPS A L+G + F LD I NY+ V + G+K A
Sbjct: 219 GSGPSGAAAAVYSARKGIRTGLMGER---FGGQVLDTVDIENYISVPKTEGQKLAGALKA 275
Query: 440 HMPSYAKKIVE 450
H+ Y +++
Sbjct: 276 HVSEYDVDVID 286
>gi|399577294|ref|ZP_10771047.1| Coenzyme F420 hydrogenase [Halogranum salarium B-1]
gi|399237677|gb|EJN58608.1| Coenzyme F420 hydrogenase [Halogranum salarium B-1]
Length = 541
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 94/248 (37%), Gaps = 37/248 (14%)
Query: 130 VEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKG--VKP 187
E AQ G+VT++ +L G ++ + D+ LA T EE++A G
Sbjct: 253 TESAQDGGVVTSVLSHLLNAGEIDGALIATESADEPWKAESFLATTHEELVANAGSIYNQ 312
Query: 188 TLS-PNLNTLALVEAAGV----KRLLFCGVGCQVQALRSVE--------HHLNLEKL-YV 233
T++ NLN + V L G C+++ +R+++ + + Y
Sbjct: 313 TMALGNLNPRQWEDKLDVPWEEASLALVGTPCEIEGIRALQDFEWEYGSQEAGVRAIDYT 372
Query: 234 LGTNCVDNGTREGL--DKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHI---EEVPYFC 288
+ C N L ++ + PE + + + + H DG + E+V F
Sbjct: 373 IALMCTKNFNYHRLIGEQLAEKRDLPPEDIGKLDVLHGKMMAYDH-DGELILEEDVENFH 431
Query: 289 LPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
D C C D++ ADL VG +G + + VR E+G +
Sbjct: 432 -------DAALKGCSECADFSGYCADLAVGSVG--------SSDEYSSVLVRTEQGMKAW 476
Query: 349 SLVKNLLE 356
L + L+
Sbjct: 477 KLTEPDLD 484
>gi|383319432|ref|YP_005380273.1| Coenzyme F420-reducing hydrogenase, beta subunit [Methanocella
conradii HZ254]
gi|379320802|gb|AFC99754.1| Coenzyme F420-reducing hydrogenase, beta subunit [Methanocella
conradii HZ254]
Length = 285
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 133 AQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLSPN 192
AQ G VT++ L++G ++ V + ++ + P +A T EE L + LSP+
Sbjct: 26 AQDGGTVTSLICYALESGFIDGAVLTRKSEEEWV-PEQYVATTREEALESAKSVYALSPS 84
Query: 193 LNTL--ALVEAAGVKRLLFCGVGCQVQALRSVEHH------LNLEKLYVLGTNCVDNGTR 244
L L A E A + R+ + G+ CQV+A+R ++ + + V+G C +N
Sbjct: 85 LYWLKEATREKA-LTRIGYVGLPCQVEAIRKMQLYPFGARDIVDSLALVIGIFCYENFYP 143
Query: 245 EGLDKFLKAASSEP 258
L ++ EP
Sbjct: 144 ASLKAIVEGLGEEP 157
>gi|134046621|ref|YP_001098106.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Methanococcus
maripaludis C5]
gi|132664246|gb|ABO35892.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanococcus maripaludis C5]
Length = 359
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 96/250 (38%), Gaps = 62/250 (24%)
Query: 124 ARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAK 183
A+ T + Q G+VT I G+++ + + D + P+ LA + E+VL
Sbjct: 106 AKSTLETKNIQSGGVVTAILANAFDEGLIDGAIVMMEDKW-TMDPKSYLATSKEDVLKTA 164
Query: 184 GVKPTLS-PNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNG 242
G + + P L AL EA VK+L K+ V+GT CV N
Sbjct: 165 GSRYNWNVPILE--ALKEAVMVKKL---------------------NKIAVVGTPCVINA 201
Query: 243 ------TREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPY---------- 286
T+ L + K A ++ +E DY LK + +E P+
Sbjct: 202 VYHIMATKNDLVEPFKEAIRLKVSLFCFETF-DYDKMLKKIK-ELEINPWDIKKMEIDKG 259
Query: 287 -----------FCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQ 335
+L +++ C C D+T +D+ VG +G P+ G S
Sbjct: 260 KLIVSTIHGNVISFKIEELDEMVRKGCNVCRDFTGISSDISVGNVGTPE--GYST----- 312
Query: 336 YITVRNERGK 345
+ +RN+ GK
Sbjct: 313 -VLIRNKWGK 321
>gi|340623265|ref|YP_004741718.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Methanococcus
maripaludis X1]
gi|339903533|gb|AEK18975.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit [Methanococcus
maripaludis X1]
Length = 359
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 28/233 (12%)
Query: 124 ARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAK 183
A+ T + Q G+VT I +++ + + D + P+ LA + E+VL
Sbjct: 106 AKSTLETKNIQSGGVVTAILANAFDEDLIDGAIVMMEDKW-TMDPKSYLATSKEDVLKTA 164
Query: 184 GVKPTLS-PNLNTLALVEAAGVKRL---LFCGVGCQVQALRSVEHHLN-----LEKLYVL 234
G + + P L L EA VK+L G C + A+ + N +K L
Sbjct: 165 GSRYNWNVPILEVLK--EAVMVKKLNKIAVVGTPCVINAVYQMMATNNDLVEPFKKAIRL 222
Query: 235 GTN--CVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAN 292
+ C + + + K LK P + E + K+ + + G++ F +
Sbjct: 223 KISLFCFETFDYDKMLKKLKEVEVNPWDIKKME-IDKGKLIVSTIHGNV-----FNFKID 276
Query: 293 DLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGK 345
++ + + C C D+T +D+ VG +G P+ G S + VRN+ GK
Sbjct: 277 EMDEYVRKGCKVCRDFTGISSDISVGNVGTPE--GYST------VLVRNKWGK 321
>gi|45357646|ref|NP_987203.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta
domain-containing protein [Methanococcus maripaludis S2]
gi|45047206|emb|CAF29639.1| conserved archaeal protein [Methanococcus maripaludis S2]
Length = 359
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 28/233 (12%)
Query: 124 ARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAK 183
A+ T + Q G+VT I +++ + + D + P+ LA + E+VL
Sbjct: 106 AKSTLETKNIQSGGVVTAILANAFDEDLIDGAIVMMEDKW-TMDPKSYLATSKEDVLKTA 164
Query: 184 GVKPTLS-PNLNTLALVEAAGVKRL---LFCGVGCQVQALRSVEHHLN-----LEKLYVL 234
G + + P L L EA VK+L G C + A+ + N +K L
Sbjct: 165 GSRYNWNVPILEVLK--EAVMVKKLNKIAVVGTPCVINAVYQMMATNNDLVEPFKKAIRL 222
Query: 235 GTN--CVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAN 292
+ C + + + K LK P + E + K+ + + G++ F +
Sbjct: 223 KISLFCFETFDYDKMLKKLKEVEVNPWDIKKME-IDKGKLIVSTIHGNV-----FNFKID 276
Query: 293 DLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGK 345
++ + + C C D+T +D+ VG +G P+ G S + VRN+ GK
Sbjct: 277 EMDEYVRKGCKVCRDFTGISSDISVGNVGTPE--GYST------VLVRNKWGK 321
>gi|399890006|ref|ZP_10775883.1| related to F420H2-dehydrogenase, beta subunit [Clostridium arbusti
SL206]
Length = 389
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 205 KRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPET-VLH 263
K +LF G CQV AL + +H N + LY C + +K+LK ++ ++
Sbjct: 155 KFVLFTGTPCQVNALYNFLNH-NYDNLYTCDVICHGVPSPLVFNKYLKYMEDNKDSKIVK 213
Query: 264 YEF------MQDYKVHLKHLDGH-----IEEVPYFCLPANDLVDVIAPSCYSCFDYT-NA 311
Y F + Y + +++ D + E Y +DL + SCY+C T N
Sbjct: 214 YNFRDKTFGWKKYNIKIQYEDNNSTLTKFNEDIYMKGFLSDL--YLRNSCYNCKCKTDNV 271
Query: 312 LADLVVG-YMGVP-KYTGISMTQHPQYITVRNERGKEMLSLVKNLLEITPT 360
++D+ +G + G+ KY I + + + +G++++ ++K+ + + P
Sbjct: 272 MSDITIGDFWGIENKYPEIDDDKGMAAVIINTTKGRKIIDILKDNIFMQPV 322
>gi|401887672|gb|EJT51651.1| ATP dependent DNA helicase [Trichosporon asahii var. asahii CBS
2479]
Length = 765
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 69 GLCDT------YYIA--HVKDACAFLGDGMSRIEGLETVVHG---RGRRKDSLDDTYLGV 117
G+CD Y+A H+ + CA L S IE LE + H R R+D+ D T +
Sbjct: 413 GMCDVCANRAGVYLAAQHLTEDCAPL----SPIEPLEPLEHSSPPRTTRQDNPDCTLAAL 468
Query: 118 HEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSP 168
H+E P G QWTG+ +T TG V S DD L+P
Sbjct: 469 HDE--------PQTGLQWTGVFSTFGT----TGSGIGSTGVSSKVDDDLAP 507
>gi|282164844|ref|YP_003357229.1| putative coenzyme F420 hydrogenase subunit beta [Methanocella
paludicola SANAE]
gi|282157158|dbj|BAI62246.1| putative coenzyme F420 hydrogenase subunit beta [Methanocella
paludicola SANAE]
Length = 341
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 103/240 (42%), Gaps = 23/240 (9%)
Query: 108 DSLDDTYLGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLS 167
D L LG H ++ + T + Q G VT + L G+V+ V+ + +D + +
Sbjct: 75 DKLSLDILGPHLDVYNVKATAGNKRYQNGGAVTALLKTALDEGLVDRVIVMGADRWAQKA 134
Query: 168 PRPVLARTPEEVLAAKGVKPTLSPNLNTLA-LVEAAGVKRLLFCGVGCQVQAL-----RS 221
V++ + AA + + L T+ +++ ++ + G C +Q++ S
Sbjct: 135 YARVVSDSSSLDRAAGSIYMN-NDALETMKDIMKDDSIRNVAIVGTPCAIQSIGLLRKSS 193
Query: 222 VEHHLNLEK--LYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQ----DYKVHLK 275
E+ + L + + +G C E D L ++ V + + + ++ +
Sbjct: 194 NEYSVKLTQKIRFAIGLFCF-----ESFDDRLIPEVTKRLGVPSWRIAKMNAGEGRLTVT 248
Query: 276 HLDGHIEEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQ 335
G ++ LP + L + + P C C D+T+ LAD+ VG +G + + +T+ P+
Sbjct: 249 LRSGEVKT-----LPLSSLAEFVKPGCRKCNDFTSKLADISVGSVGSAAGSSVVITRTPE 303
>gi|371777287|ref|ZP_09483609.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
[Anaerophaga sp. HS1]
Length = 448
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 32/211 (15%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVK---PTLSPNL 193
GI T I E+L+ G+V+ V CV+ + ++ + EE++ + K +LS +
Sbjct: 112 GIATFILSELLERGIVDNVFCVKESTKKGVYYEYGVSHSKEELINSSKTKYFPVSLSEVM 171
Query: 194 NTLALVEAAGVKRLLFCGVGCQVQALRSVEH---HLNLEKLYVLGTNCVDNGTREGLDKF 250
+ + ++ ++ GVGC ++A+R +H L + +++G C G + F
Sbjct: 172 SKIQDLKG----KIAVVGVGCFIKAVRLAQHKKPELKEKIPFLVGIIC--GGVKSS---F 222
Query: 251 LKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVD-------------- 296
+E VL + ++ K +K+++ + + C+ N +
Sbjct: 223 FTEYLAEKSGVLK-QNIEKPKYRIKNIESTAGDYLFGCINKNRQSEHTLRMRSVGDMWGT 281
Query: 297 --VIAPSCYSCFDYTNALADLVVGYMGVPKY 325
A +C C D T LAD+ +G +P Y
Sbjct: 282 GLFKANACDFCDDVTTELADVSLGDAWLPPY 312
>gi|302671770|ref|YP_003831730.1| coenzyme F420-reducing hydrogenase beta subunit [Butyrivibrio
proteoclasticus B316]
gi|302396243|gb|ADL35148.1| coenzyme F420-reducing hydrogenase beta subunit [Butyrivibrio
proteoclasticus B316]
Length = 391
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 103/275 (37%), Gaps = 31/275 (11%)
Query: 63 DHCSRCGLCDTYYIAHVKDACAFLGDGMS--RIEGLETVVHGRGRRKD------SLDDTY 114
++CS CGLC A +K L M+ + E+V G + + Y
Sbjct: 8 EYCSACGLCQGKGYAELKFNDGLLKPNMNVDNTDFFESVCPITGSVYEIQPEWGEFEKVY 67
Query: 115 LGVHEELLYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLAR 174
+G Y+ A G++T++A +L +++ V+ D D + +
Sbjct: 68 VG------YSNDPDIRHMASSGGVITSLASYLLDKKLIDGVIHTGKDTDKPWRTKTYCST 121
Query: 175 TPEEVLAAKGVKPTLS-PNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLY- 232
TP+EV+ G + T S P + L E K+ ++ G C V AL ++ L+K +
Sbjct: 122 TPKEVVDRCGSRYTQSMPLADIFNLTEYG--KKYIYIGKPCDVLAL---TNYFKLDKEFA 176
Query: 233 -----VLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQD----YKVHLKHLDGHIEE 283
+ C + + LK +PE + + D Y + G +
Sbjct: 177 SRFICTISFFCAGAPSENAQMRLLKELDCKPEECIELRYRGDGWPGYATAVNR-SGIKTQ 235
Query: 284 VPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVG 318
+ Y L I SC C + T AD+ G
Sbjct: 236 MTYNDSWGKILGRDIRKSCKFCMNGTGEPADISCG 270
>gi|397780496|ref|YP_006544969.1| formate dehydrogenase, beta subunit [Methanoculleus bourgensis MS2]
gi|396938998|emb|CCJ36253.1| formate dehydrogenase, beta subunit [Methanoculleus bourgensis MS2]
Length = 412
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 5/120 (4%)
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
+A E + G VT + LKTGMV+AV+ V+ D PVL P E+
Sbjct: 11 WASDAACQERGECGGAVTALLTHALKTGMVDAVLAVKKG-QDIYDAVPVLITDPAEIAET 69
Query: 183 KGVKPTLSPNLNTL--ALVEAAGVKRLLFCGVGCQVQALRSV--EHHLNLEKLYVLGTNC 238
G + L+ L ++ A R+ GC L + + +NL+ + ++G NC
Sbjct: 70 AGSLHCGTLLLSKLFKTYLDGAANMRIAVTVKGCDAMGLYELAKRNQINLDNVLMIGLNC 129
>gi|159905251|ref|YP_001548913.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta [Methanococcus
maripaludis C6]
gi|159886744|gb|ABX01681.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanococcus maripaludis C6]
Length = 359
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 93/233 (39%), Gaps = 28/233 (12%)
Query: 124 ARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAK 183
A+ T + Q G+VT I G+++ + + D + P+ LA + E+VL
Sbjct: 106 AKSTLETKNIQSGGVVTAILANAFDEGLIDGAIVMMEDKW-TMDPKSYLATSKEDVLKTA 164
Query: 184 GVKPTLS-PNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYV--------- 233
G + + P L L EA VK+L V + +V H + V
Sbjct: 165 GSRYNWNVPILEVLK--EAVMVKKLNKIAVVGTPCVINAVYHMMATNNDLVEPFKEAIRL 222
Query: 234 -LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAN 292
+ C + + + K +K P V E + K+ + + G++ +
Sbjct: 223 KISLFCFETFDYDKMLKKIKELDVNPWDVKKME-IDKGKLIISTIYGNV-----LSFKID 276
Query: 293 DLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGK 345
+L +++ C C D+T +D+ VG +G P G S + +RN+ GK
Sbjct: 277 ELDEMVRKGCKVCRDFTGISSDISVGNVGTPD--GYST------VLIRNKWGK 321
>gi|88603075|ref|YP_503253.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Methanospirillum hungatei JF-1]
gi|88188537|gb|ABD41534.1| formate dehydrogenase, beta subunit (F420) [Methanospirillum
hungatei JF-1]
Length = 414
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 30/257 (11%)
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLA 181
++A+ + +E + G VT + L++ V+AV+ V+ D P P EV +
Sbjct: 10 VWAKDKEILEKGECGGAVTALLKYALESKFVDAVLAVRKG-QDIYDAVPAFITDPAEVAS 68
Query: 182 AKG---VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSV--EHHLNLEKLYVLGT 236
G L P + A G+K + C GC + A + + +NL+ + ++G
Sbjct: 69 TAGSLHCGTLLLPKILKNYADGAKGMKIAVTCK-GCDIMAFYELAKRNQVNLDNIVMIGV 127
Query: 237 NCVDNGTREGLDKFL-KAASSEPETVLHYEFMQDYKVHLKHLDGH----IEEVPY--FCL 289
NC + + G K + + +P+TV H E + + +++ GH I+E+ F
Sbjct: 128 NCGGSVSPVGARKMIAEKFGVDPDTV-HKEEIDKGQFIIEYEGGHKGIKIDELEEEGFGR 186
Query: 290 PANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 349
+N C C ADL G GV T +I V +E+G ++LS
Sbjct: 187 RSN---------CRRCKMKIPRQADLACGNWGVIGDKAGKAT----FIEVCSEKGAKLLS 233
Query: 350 --LVKNLLEITPTISSG 364
K ++E+ G
Sbjct: 234 DAQAKGVVEVAAADPKG 250
>gi|88603270|ref|YP_503448.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein
[Methanospirillum hungatei JF-1]
gi|88188732|gb|ABD41729.1| formate dehydrogenase, beta subunit (F420) [Methanospirillum
hungatei JF-1]
Length = 414
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 103/257 (40%), Gaps = 32/257 (12%)
Query: 123 YARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAA 182
+A+ + + + G VT + L+T MV+AVV ++ D P + PE+++
Sbjct: 11 WAKDAEIQKKGECGGAVTALLKHALETKMVDAVVAIKKGK-DLYDAVPTVITNPEDIIQT 69
Query: 183 KG---VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSV--EHHLNLEKLYVLGTN 237
G L P L L A +K + C GC A + + +NL+ + ++G N
Sbjct: 70 AGSLHCGTLLIPKLIKKYLNGAKDMKLAVTCK-GCDAMAFYELAKRNQINLDNIIMIGVN 128
Query: 238 CVDNGTREGLDKFLKAA-SSEPETVLHYEFMQDYKVHLKHLDGH-------IEEVPYFCL 289
C + + K + +P+TV H E + + +++ GH +EE Y
Sbjct: 129 CGGSVSPVTARKMISNKFGVDPDTV-HKEEIDKGQFIIEYEGGHKGIKIDELEEEGYG-- 185
Query: 290 PANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS 349
+C C AD+ G GV T ++ + +E+G +++
Sbjct: 186 --------RRSNCRRCKMKIPRQADIAAGNWGVIGDKAGKAT----FLEICSEKGANLVN 233
Query: 350 LV--KNLLEITPTISSG 364
K LEI+P G
Sbjct: 234 SAQSKGALEISPADPKG 250
>gi|294494960|ref|YP_003541453.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta domain protein
[Methanohalophilus mahii DSM 5219]
gi|292665959|gb|ADE35808.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
[Methanohalophilus mahii DSM 5219]
Length = 638
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 50/262 (19%), Positives = 103/262 (39%), Gaps = 36/262 (13%)
Query: 78 HVKDACAFLGDGMSRIEGLETVVHGRGRRKDSLD-----DTYLGVHEELLYARKTKP--V 130
H+KD C G+G + + ++ D + LG +E+++ AR T +
Sbjct: 41 HLKDECYRNGEGACKDVCQRVMTDASRIALNAFDFKAKPPSLLGQYEKIVSARATDEDLI 100
Query: 131 EGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLS 190
+ Q G V+++ + G+++ + P + E++ +++G K +
Sbjct: 101 KKGQDGGAVSSLIAYCIDNGLIDGAITTAG----FAKPAANIIGEREDITSSQGAKYSTV 156
Query: 191 PNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHH--LNLEKL---------------YV 233
P L+ L + ++ G CQ +R +++ LN+ + YV
Sbjct: 157 PVLSALR-DQKDNFNKVAVVGTPCQTYGVRRMQYFNGLNVHPVEKGMDGESANTPKIEYV 215
Query: 234 LGTNCVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPAND 293
+G C++N L FL+ + + Y D + + + +IE + D
Sbjct: 216 IGLFCMENFNYHKLSDFLEKQGIKLNDIKKYSIQLDEMI-ITTDEKNIE------ISLKD 268
Query: 294 LVDVIAPSCYSCFDYTNALADL 315
L D + C C D + +AD+
Sbjct: 269 LQDCVWDGCKICRDAVSKVADI 290
>gi|397780007|ref|YP_006544480.1| formate dehydrogenase, beta subunit [Methanoculleus bourgensis MS2]
gi|396938509|emb|CCJ35764.1| formate dehydrogenase, beta subunit [Methanoculleus bourgensis MS2]
Length = 422
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 12/128 (9%)
Query: 120 ELLYARKTKPV--EGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPD--DRLSPRPVLART 175
+LLYA T E A+ G VT + LK+GMV+ V V+ D D L P L
Sbjct: 6 DLLYAWTTDESLREKAETGGAVTALLAHALKSGMVDGVFAVRKGADVYDAL---PALITD 62
Query: 176 PEEVLAAKG---VKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRSV--EHHLNLEK 230
P E+ G L P L+ R+ GC V+A+ + + +NL+
Sbjct: 63 PAEIGGIAGSLHCGTLLLPKQMRRCLLSTEPDMRIATVLKGCDVKAIYEMAKRNQVNLDN 122
Query: 231 LYVLGTNC 238
+ ++G NC
Sbjct: 123 IIIIGLNC 130
>gi|288559592|ref|YP_003423078.1| formate dehydrogenase beta subunit FdhB1 [Methanobrevibacter
ruminantium M1]
gi|288542302|gb|ADC46186.1| formate dehydrogenase beta subunit FdhB1 [Methanobrevibacter
ruminantium M1]
Length = 402
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 131 EGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVKPTLS 190
E ++ G+VTTI +L+ G+V+AVV V+ + D +P+L PE+V+ + G +
Sbjct: 20 EKGEYGGVVTTIMKYLLEEGIVDAVVAVE-EAADLYDAKPILITDPEDVIKSAGSLHCGT 78
Query: 191 PNLNTLA--LVEAAGVKRLLFCGVGCQVQALRSVEHHLNL--EKLYVLGTNC 238
NL ++ A ++ C L+ + + E + ++G NC
Sbjct: 79 LNLAKFVSKYLDGARDMKIAVTTKPCDAMTLKELMRKRKVIEENVIMIGVNC 130
>gi|397780494|ref|YP_006544967.1| formate dehydrogenase, beta subunit [Methanoculleus bourgensis MS2]
gi|396938996|emb|CCJ36251.1| formate dehydrogenase, beta subunit [Methanoculleus bourgensis MS2]
Length = 383
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 18/234 (7%)
Query: 122 LYARKTKPVEGAQWTGIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLA 181
++A ++ + G +T + LK+GMV+AV+ V+ D PV P+EV
Sbjct: 10 VWAADADVLKKGECGGAITALQQYALKSGMVDAVLAVRKG-QDIYDAVPVFITNPDEVAE 68
Query: 182 AKGVKPTLSPNLNTLA--LVEAAGVKRLLFCGVGCQVQALRSV--EHHLNLEKLYVLGTN 237
G + L+ L +++ RL GC L + + +++++L +LG N
Sbjct: 69 TAGSLHCGTLLLSKLVKQYLDSNKTARLGVTVKGCDTMGLIELAKRNAVDMDRLLLLGVN 128
Query: 238 CVDNGTREGLDKFLKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDV 297
C + + K + V+H E + + +++ GH + +DL D
Sbjct: 129 CGGSVSPVLARKMIAEKFEVDPDVVHKEEIDKGQFIIEYEGGHKG------ISIDDLEDW 182
Query: 298 ---IAPSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEML 348
+C C ADL G GV T ++ V +E+G +L
Sbjct: 183 GYGRRSNCRRCLYKVPRQADLACGNWGVIGDKAGKAT----FVEVCSEKGANLL 232
>gi|422016681|ref|ZP_16363261.1| 4Fe-4S ferredoxin [Providencia burhodogranariea DSM 19968]
gi|414092447|gb|EKT54124.1| 4Fe-4S ferredoxin [Providencia burhodogranariea DSM 19968]
Length = 454
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 101/245 (41%), Gaps = 35/245 (14%)
Query: 137 GIVTTIAIEMLKTGMVEAVVCVQSDPDDRLSPRPVLARTPEEVLAAKGVK---PTLSPNL 193
GI T + E+L+ G+++ V+ V+ D L ++ + E++ AA K TL L
Sbjct: 112 GIATYLLTELLRKGIIQHVISVKESESDNLHYEYSISSSEEQLNAAAKTKYYPVTLENVL 171
Query: 194 NTLALVEAAGVKRLLFCGVGCQVQALRSVEHH---LNLEKLYVLGTNCVDNGTREGLDKF 250
+ +E GV C ++ +R +++ L + +++G C + +
Sbjct: 172 KKIQELEG----NFAIVGVACFIKGIRLAQYYDPTLKQKIKFLIGIICGGIKSTFFAEYL 227
Query: 251 LKAASSEPETVLHYEFMQDYKVHLKHLDGHIEEVPYFCLPANDLVDVI------------ 298
AS+ P L Y+ D++V K ++ + C+ +I
Sbjct: 228 ASKASASP---LEYK-KPDFRV--KDINSTAHNYAFSCIDKTGEQKIIKMWKVGDMWGTG 281
Query: 299 ---APSCYSCFDYTNALADLVVGYMGVPKYTGISMTQHPQYITVRNERGKEMLS--LVKN 353
A +C C D T LAD+ +G + Y+ + I R+ + +L ++KN
Sbjct: 282 LFKANACDFCDDVTTELADISLGDAWLEPYSNDG--KGTNVIVTRSILAENLLQDGVLKN 339
Query: 354 LLEIT 358
L+I+
Sbjct: 340 ELDIS 344
>gi|223949797|gb|ACN28982.1| unknown [Zea mays]
Length = 89
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 20/25 (80%)
Query: 359 PTISSGDRRPFVMETVKADDNAKMG 383
+I+ G R+PFVMETVK DD AK+G
Sbjct: 26 TSIAKGSRQPFVMETVKDDDAAKLG 50
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,477,741,770
Number of Sequences: 23463169
Number of extensions: 327898885
Number of successful extensions: 1040735
Number of sequences better than 100.0: 516
Number of HSP's better than 100.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 290
Number of HSP's that attempted gapping in prelim test: 1039432
Number of HSP's gapped (non-prelim): 716
length of query: 465
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 319
effective length of database: 8,933,572,693
effective search space: 2849809689067
effective search space used: 2849809689067
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)