Your job contains 1 sequence.
>012356
MAVQEGSPAPSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMK
AINDRILSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK
GGYFVLNDVFRFVEENESLENNSDSVVNETAPTANVTEAPEPAHDQDHIPADRAIVIEGE
DLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIV
KVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAPENSNVNEEA
EGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYCFGFVAFETPGSVQSAL
EASPILIGDRPADVEAKRANSRVGGGGGGRGRFSSGRVGFRSDSFKGRGNFGGGRGYGRN
EFRGQGEFSGRPKGSSGRNGDGRANQNGNRRGGPQGGVNRNSVTA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012356
(465 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2173567 - symbol:AT5G60980 species:3702 "Arabi... 1028 8.6e-104 1
TAIR|locus:2152566 - symbol:AT5G48650 species:3702 "Arabi... 437 3.6e-41 1
TAIR|locus:2023854 - symbol:AT1G13730 species:3702 "Arabi... 359 6.7e-33 1
TAIR|locus:2172472 - symbol:AT5G43960 species:3702 "Arabi... 308 1.7e-27 1
TAIR|locus:2098555 - symbol:AT3G07250 species:3702 "Arabi... 213 2.9e-27 2
TAIR|locus:2026423 - symbol:AT1G69250 species:3702 "Arabi... 305 3.5e-27 1
ZFIN|ZDB-GENE-030131-7452 - symbol:g3bp1 "GTPase activati... 217 3.1e-23 2
UNIPROTKB|E2QYY6 - symbol:G3BP2 "Uncharacterized protein"... 276 7.4e-23 1
UNIPROTKB|E1C769 - symbol:G3BP2 "Uncharacterized protein"... 224 7.9e-23 2
UNIPROTKB|Q2KJ17 - symbol:G3BP2 "GTPase activating protei... 273 2.4e-22 1
UNIPROTKB|I3LPH5 - symbol:G3BP2 "Uncharacterized protein"... 269 1.0e-21 1
ZFIN|ZDB-GENE-040426-2698 - symbol:zgc:56304 "zgc:56304" ... 229 1.7e-21 2
RGD|1309571 - symbol:G3bp2 "GTPase activating protein (SH... 267 2.1e-21 1
POMBASE|SPBP8B7.11 - symbol:nxt3 "ubiquitin protease cofa... 263 6.0e-21 1
FB|FBgn0015778 - symbol:rin "rasputin" species:7227 "Dros... 232 1.7e-19 2
MGI|MGI:2442040 - symbol:G3bp2 "GTPase activating protein... 233 5.0e-17 1
UNIPROTKB|Q9UN86 - symbol:G3BP2 "Ras GTPase-activating pr... 232 6.5e-17 1
UNIPROTKB|F6XCI1 - symbol:G3BP2 "Uncharacterized protein"... 232 6.9e-17 1
ASPGD|ASPL0000013038 - symbol:AN8268 species:162425 "Emer... 230 1.4e-16 1
MGI|MGI:1351465 - symbol:G3bp1 "GTPase activating protein... 228 1.7e-16 1
UNIPROTKB|Q13283 - symbol:G3BP1 "Ras GTPase-activating pr... 227 2.3e-16 1
UNIPROTKB|F1RQB6 - symbol:G3BP1 "Uncharacterized protein"... 226 3.0e-16 1
UNIPROTKB|Q32LC7 - symbol:G3BP "Ras GTPase-activating pro... 226 3.0e-16 1
UNIPROTKB|E2RN45 - symbol:G3BP1 "Uncharacterized protein"... 224 4.4e-16 1
UNIPROTKB|D6RAC7 - symbol:G3BP2 "Ras GTPase-activating pr... 205 4.4e-16 1
UNIPROTKB|D6RB17 - symbol:G3BP2 "Ras GTPase-activating pr... 205 4.4e-16 1
ZFIN|ZDB-GENE-070112-1972 - symbol:g3bp2 "GTPase activati... 224 6.5e-16 1
UNIPROTKB|Q5ZMN1 - symbol:G3BP1 "Uncharacterized protein"... 223 7.0e-16 1
UNIPROTKB|F1LVS8 - symbol:F1LVS8 "Uncharacterized protein... 219 1.7e-15 1
UNIPROTKB|E5RJU8 - symbol:G3BP1 "Ras GTPase-activating pr... 196 4.4e-15 1
UNIPROTKB|E5RH42 - symbol:G3BP1 "Ras GTPase-activating pr... 192 1.2e-14 1
UNIPROTKB|Q5HYE9 - symbol:DKFZp313K0921 "Putative unchara... 192 1.2e-14 1
UNIPROTKB|E5RIZ6 - symbol:G3BP1 "Ras GTPase-activating pr... 187 4.4e-14 1
UNIPROTKB|D6RGJ4 - symbol:G3BP2 "Ras GTPase-activating pr... 185 7.3e-14 1
UNIPROTKB|D6RBW8 - symbol:G3BP2 "Ras GTPase-activating pr... 183 1.2e-13 1
UNIPROTKB|F1M2M6 - symbol:F1M2M6 "Uncharacterized protein... 178 1.8e-13 2
TAIR|locus:2099926 - symbol:AT3G55540 species:3702 "Arabi... 190 1.5e-12 1
UNIPROTKB|D6RE13 - symbol:G3BP2 "Ras GTPase-activating pr... 163 1.9e-11 1
ASPGD|ASPL0000071333 - symbol:ntfA species:162425 "Emeric... 159 5.2e-11 1
UNIPROTKB|E5RI46 - symbol:G3BP1 "Ras GTPase-activating pr... 153 2.4e-10 1
UNIPROTKB|E5RIF8 - symbol:G3BP1 "Ras GTPase-activating pr... 153 2.4e-10 1
MGI|MGI:1926034 - symbol:Celf3 "CUGBP, Elav-like family m... 171 1.4e-09 2
UNIPROTKB|F1ST15 - symbol:CELF3 "Uncharacterized protein"... 167 1.7e-09 1
DICTYBASE|DDB_G0277957 - symbol:DDB_G0277957 "nuclear tra... 122 1.9e-09 2
UNIPROTKB|Q5SZQ8 - symbol:CELF3 "CUGBP Elav-like family m... 165 2.8e-09 1
UNIPROTKB|D6RBR0 - symbol:G3BP2 "Ras GTPase-activating pr... 143 2.9e-09 1
UNIPROTKB|D6REX8 - symbol:G3BP2 "Ras GTPase-activating pr... 143 2.9e-09 1
UNIPROTKB|Q08E07 - symbol:CELF3 "CUGBP Elav-like family m... 164 3.5e-09 1
RGD|1563168 - symbol:Celf3 "CUGBP, Elav-like family membe... 163 5.2e-09 1
DICTYBASE|DDB_G0276425 - symbol:nutf2 "nuclear transport ... 140 6.2e-09 1
UNIPROTKB|H0Y623 - symbol:CELF3 "CUGBP Elav-like family m... 165 6.9e-09 2
POMBASE|SPAC15F9.03c - symbol:nxt2 "nuclear transport fac... 139 8.0e-09 1
UNIPROTKB|E2RGA8 - symbol:CELF3 "Uncharacterized protein"... 160 1.3e-08 1
GENEDB_PFALCIPARUM|PF14_0122 - symbol:PF14_0122 "nuclear ... 137 1.3e-08 1
UNIPROTKB|Q8ILX1 - symbol:PF14_0122 "Nuclear transport fa... 137 1.3e-08 1
FB|FBgn0031145 - symbol:Ntf-2 "Nuclear transport factor-2... 136 1.7e-08 1
UNIPROTKB|Q5SZQ7 - symbol:CELF3 "CUGBP Elav-like family m... 156 2.3e-08 1
TAIR|locus:2200066 - symbol:NTL "NTF2-like" species:3702 ... 133 3.6e-08 1
UNIPROTKB|B4DQL3 - symbol:CELF3 "CUGBP Elav-like family m... 147 6.4e-08 1
FB|FBgn0032680 - symbol:Ntf-2r "Nuclear transport factor-... 128 1.3e-07 1
TAIR|locus:2010509 - symbol:NTF2B "AT1G27970" species:370... 128 1.3e-07 1
SGD|S000000811 - symbol:NTF2 "Nuclear envelope protein" s... 125 2.7e-07 1
UNIPROTKB|Q91579 - symbol:tnrc4-a "CUGBP Elav-like family... 147 2.8e-07 1
TAIR|locus:2015914 - symbol:NTF2A "AT1G27310" species:370... 124 3.4e-07 1
WB|WBGene00004305 - symbol:ran-4 species:6239 "Caenorhabd... 123 4.4e-07 1
UNIPROTKB|Q7ZWM3 - symbol:tnrc4-b "CUGBP Elav-like family... 145 4.7e-07 1
ZFIN|ZDB-GENE-000501-2 - symbol:celf3a "cugbp, Elav-like ... 144 5.8e-07 1
UNIPROTKB|E2RJG5 - symbol:CELF6 "Uncharacterized protein"... 139 1.9e-06 1
UNIPROTKB|F1S8E8 - symbol:CELF5 "Uncharacterized protein"... 136 4.0e-06 1
UNIPROTKB|K7EJD7 - symbol:CELF4 "CUGBP Elav-like family m... 125 4.0e-06 1
MGI|MGI:1923433 - symbol:Celf6 "CUGBP, Elav-like family m... 136 4.7e-06 1
UNIPROTKB|F1PXQ8 - symbol:CELF5 "Uncharacterized protein"... 136 5.1e-06 1
UNIPROTKB|Q8N6W0 - symbol:CELF5 "CUGBP Elav-like family m... 136 5.1e-06 1
UNIPROTKB|F1MD42 - symbol:F1MD42 "Uncharacterized protein... 136 5.2e-06 1
UNIPROTKB|B3KWE6 - symbol:BRUNOL6 "cDNA FLJ42868 fis, clo... 130 5.2e-06 2
ZFIN|ZDB-GENE-040718-300 - symbol:celf4 "CUGBP, Elav-like... 135 7.4e-06 1
UNIPROTKB|F1P5J4 - symbol:BRUNOL6 "Uncharacterized protei... 132 8.1e-06 1
UNIPROTKB|D6RBM9 - symbol:G3BP2 "Ras GTPase-activating pr... 110 1.1e-05 1
SGD|S000005334 - symbol:BRE5 "Ubiquitin protease cofactor... 133 1.2e-05 1
RGD|1310451 - symbol:Celf6 "CUGBP, Elav-like family membe... 132 1.3e-05 1
UNIPROTKB|F1NYP4 - symbol:CELF4 "Uncharacterized protein"... 130 1.4e-05 1
UNIPROTKB|Q96J87 - symbol:CELF6 "CUGBP Elav-like family m... 130 1.7e-05 2
RGD|1307630 - symbol:Celf4 "CUGBP, Elav-like family membe... 129 1.8e-05 1
UNIPROTKB|Q9Y4C8 - symbol:RBM19 "Probable RNA-binding pro... 134 2.2e-05 1
UNIPROTKB|F1SHM1 - symbol:CELF6 "Uncharacterized protein"... 129 3.0e-05 1
ZFIN|ZDB-GENE-110408-50 - symbol:celf3b "cugbp, Elav-like... 128 3.4e-05 1
UNIPROTKB|G4MRZ3 - symbol:MGG_02479 "Nuclear transport fa... 105 4.0e-05 1
WB|WBGene00013293 - symbol:Y57G11A.5 species:6239 "Caenor... 105 4.0e-05 1
UNIPROTKB|E1B8K2 - symbol:CELF6 "Uncharacterized protein"... 127 5.0e-05 1
UNIPROTKB|F1SAI1 - symbol:CELF4 "Uncharacterized protein"... 124 6.9e-05 1
UNIPROTKB|F1RKD1 - symbol:RBM19 "Uncharacterized protein"... 128 0.00010 1
FB|FBgn0264001 - symbol:bru-3 "bruno-3" species:7227 "Dro... 123 0.00011 1
ZFIN|ZDB-GENE-050208-746 - symbol:celf5 "cugbp, Elav-like... 125 0.00011 1
UNIPROTKB|E2RRF5 - symbol:RBM19 "Uncharacterized protein"... 127 0.00013 1
UNIPROTKB|F1P1R2 - symbol:RBM19 "Uncharacterized protein"... 124 0.00016 1
CGD|CAL0001254 - symbol:orf19.1086 species:5476 "Candida ... 92 0.00021 3
UNIPROTKB|B4E241 - symbol:SFRS3 "Splicing factor, arginin... 98 0.00023 1
UNIPROTKB|F1NEC5 - symbol:RBM19 "Uncharacterized protein"... 124 0.00027 1
UNIPROTKB|F1N0L5 - symbol:RBM19 "Uncharacterized protein"... 128 0.00031 2
UNIPROTKB|F5H4D6 - symbol:G3BP1 "Ras GTPase-activating pr... 116 0.00032 1
WARNING: Descriptions of 8 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2173567 [details] [associations]
symbol:AT5G60980 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISS] [GO:0009737 "response to abscisic acid stimulus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
EMBL:AB008269 InterPro:IPR018222 PROSITE:PS50177 HSSP:P33331
EMBL:AY062108 EMBL:BT003010 IPI:IPI00529722 RefSeq:NP_200906.2
UniGene:At.27353 ProteinModelPortal:Q9FME2 SMR:Q9FME2 IntAct:Q9FME2
STRING:Q9FME2 PRIDE:Q9FME2 EnsemblPlants:AT5G60980.2 GeneID:836219
KEGG:ath:AT5G60980 TAIR:At5g60980 HOGENOM:HOG000239086
InParanoid:Q9FME2 OMA:AQESHER PhylomeDB:Q9FME2
ProtClustDB:CLSN2680580 Genevestigator:Q9FME2 Uniprot:Q9FME2
Length = 460
Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
Identities = 237/441 (53%), Positives = 279/441 (63%)
Query: 1 MAVQEGSPAPSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMK 60
MA QE SP+P A+VVG AFVEQYYHILHQSPGLVHRFYQDSS L+RPD G++TTVTTM+
Sbjct: 1 MAQQEASPSPGAEVVGRAFVEQYYHILHQSPGLVHRFYQDSSFLTRPDVTGAVTTVTTMQ 60
Query: 61 AINDRILSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK 120
AIND+ILSL YEDYTAEI+TADAQ+S+E+GVIVLVTG LTG DNV+KKF+Q+FFLAPQDK
Sbjct: 61 AINDKILSLKYEDYTAEIETADAQESHERGVIVLVTGRLTGNDNVRKKFSQSFFLAPQDK 120
Query: 121 GGYFVLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTEAPEP---AHDQDHIPADRAIVI 177
G YFVLNDVFRF T PE +H+ + P A I
Sbjct: 121 G-YFVLNDVFRFLEEKEVTAQARSVPINGTTRDVQAPIEPERVVVSHEPEVEPEPVAS-I 178
Query: 178 EGEDLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKKSYA 237
E EDLDN EV DPSDK+EG VV+ E +EPP+ NE+ + V QGDAP K SYA
Sbjct: 179 EEEDLDNVAEVYDPSDKDEGVVVDVEPIEPPTQISHNEILS------VPQGDAP-KHSYA 231
Query: 238 SIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAPENSNVN 297
SI+K MK + + +V K RP P N +P A+PA PEASA + P +S+V+
Sbjct: 232 SILKQMKS-SPAPTTHVARNKPRPAPVNQKLTAPP-AEPAARPEASA--HENVPNSSHVD 287
Query: 298 EEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQ-GYCFGFVAFETPGSV 356
E +G SIYVRNL F +T T+LEE FK FG IK G+QVRSNKQ G+CFGFV FET
Sbjct: 288 VEDDGHSIYVRNLPFDSTPTQLEEVFKNFGAIKHEGIQVRSNKQQGFCFGFVEFETSSGK 347
Query: 357 QSALEASPILIGDRPADVEAKRANXXXXXXXXXXXXXXXXXXXXXX-DSFKXXXXXXXXX 415
QSALEASP+ IGDR A VE K+ N +SFK
Sbjct: 348 QSALEASPVTIGDRQAVVEEKKTNSRGGGNNGGSRGRYFSGRGSFRNESFKGGRGGGGRG 407
Query: 416 XXXXXXXXXQGEFSGRPKGSS 436
GEFSGRPK S+
Sbjct: 408 GYGRGG----GEFSGRPKSSN 424
>TAIR|locus:2152566 [details] [associations]
symbol:AT5G48650 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=ISS] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR018222
PROSITE:PS50177 EMBL:BT002864 EMBL:BT005640 IPI:IPI00523841
RefSeq:NP_199676.2 UniGene:At.29836 ProteinModelPortal:Q84JH2
SMR:Q84JH2 IntAct:Q84JH2 STRING:Q84JH2 PaxDb:Q84JH2 PRIDE:Q84JH2
EnsemblPlants:AT5G48650.1 GeneID:834922 KEGG:ath:AT5G48650
TAIR:At5g48650 eggNOG:NOG292401 InParanoid:Q84JH2 OMA:FNANIDM
PhylomeDB:Q84JH2 ProtClustDB:CLSN2918367 ArrayExpress:Q84JH2
Genevestigator:Q84JH2 Uniprot:Q84JH2
Length = 458
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 139/389 (35%), Positives = 192/389 (49%)
Query: 15 VGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSLNYEDY 74
VG+AFV QYY+I P + RFYQ+ S + R +G M +T + I++ + L Y D
Sbjct: 16 VGSAFVNQYYYIFCNMPEHLPRFYQEISRVGRVGQDGVMRDFSTFQGISEELKRLTYGDC 75
Query: 75 -TAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDVFRFX 133
+AEI + D Q+S+ G ++ VTG T + ++KFTQTFFLAPQ+KG +FVLND+ RF
Sbjct: 76 NSAEITSYDTQESHNGGFLLFVTGYFTLNERSRRKFTQTFFLAPQEKG-FFVLNDILRFV 134
Query: 134 XXXX------XXXXXXXXXXXXTAPTA-NVTEAPEPAHDQDHIPADRAIVIEGEDLDNGP 186
T PT N + E A P + V + D +N
Sbjct: 135 NDDAKDNVPETIDGEVVSGINSTTPTIINGMKGSEQAACVSVNPVCKE-VSKPLDNENAK 193
Query: 187 E-VCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVMK- 244
+ V P E V EI V ++ + D DAP KKSYAS++KV K
Sbjct: 194 DNVLVPEIANE--VARTEIT---CKEVADDSQKNYDPDD-GLADAP-KKSYASVLKVTKD 246
Query: 245 -----GYNISSAAYVPARKAR--PTPPNA-----DQQSPAMAKPAPVPEASALS-SDGAP 291
++ S +P + P+ P+ DQ A + P+ V E+ +S S A
Sbjct: 247 KFGVPAVSLPSPKKIPKDQEHQAPSDPSTGQILKDQGQQASSDPSQVIESDTVSESVDAS 306
Query: 292 ENSNVNEEA--EGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQ-GYCFGFV 348
EN + N+EA EG SIYVR+L F LE FK FG I G+QV + + GY +GFV
Sbjct: 307 ENGH-NQEAVAEGTSIYVRHLPFNANIDMLEAEFKQFGAITNGGIQVINQRGLGYPYGFV 365
Query: 349 AFETPGSVQSALEASPILIGDRPADVEAK 377
FE + A+EASP+ IG A VE K
Sbjct: 366 EFEEADAAHRAIEASPVKIGGLRAFVEEK 394
>TAIR|locus:2023854 [details] [associations]
symbol:AT1G13730 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=ISS] [GO:0009165 "nucleotide
biosynthetic process" evidence=RCA] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0000166
GO:GO:0006810 EMBL:AC027656 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 HSSP:P33331
HOGENOM:HOG000239086 EMBL:AY058169 EMBL:AY140039 EMBL:BT006581
IPI:IPI00531419 PIR:F86270 RefSeq:NP_563932.1 UniGene:At.15556
ProteinModelPortal:Q9LMX6 SMR:Q9LMX6 IntAct:Q9LMX6 STRING:Q9LMX6
PaxDb:Q9LMX6 PRIDE:Q9LMX6 EnsemblPlants:AT1G13730.1 GeneID:837933
KEGG:ath:AT1G13730 TAIR:At1g13730 eggNOG:NOG331084
InParanoid:Q9LMX6 OMA:DIAHEES PhylomeDB:Q9LMX6
ProtClustDB:CLSN2687795 ArrayExpress:Q9LMX6 Genevestigator:Q9LMX6
Uniprot:Q9LMX6
Length = 428
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 105/313 (33%), Positives = 152/313 (48%)
Query: 1 MAVQEGSPAPSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMK 60
MA++ +P +GN+FVE+YY++L++SP VH+FY D S+L RP S+G M +V ++K
Sbjct: 1 MALESNAPVVDPNTIGNSFVEKYYNLLYKSPSQVHQFYLDDSVLGRPGSDGEMVSVKSLK 60
Query: 61 AINDRILSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK 120
AIN++I+S +YE +I TAD+Q SY GV+ LVTG LT K+ + +F+Q+FFL P +
Sbjct: 61 AINEQIMSFDYEISKIQILTADSQASYMNGVVTLVTGLLTVKEGQRMRFSQSFFLVPLN- 119
Query: 121 GGYFVLNDVFRFXXXXXXXXXXXXXXXXXTAP-----TANVTEAPEPAHDQDHIPADRAI 175
G YFVLNDVFR+ P T V E EP P +
Sbjct: 120 GSYFVLNDVFRYVADEIVEPEANKKEVEEVIPQVVQPTEQVDEVAEPVTIPTQQPEAKQT 179
Query: 176 VIEGEDLDNGPE--VCDPSDK-EEGSVVEDEI--VEPPSNSVQNEVHASVDSAPVAQGDA 230
E+ PE V + K +E +VV D+ V+ P S + V + A
Sbjct: 180 T---ENTVKKPERAVANGHPKTQEDNVVNDKSNGVDAPKKSFAHIVQDLAQNGATFNAKA 236
Query: 231 -PEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDG 289
P K + K + A V + T DQQ A+ + A+ L D
Sbjct: 237 SPAKPKSKPVTKPSAARESKAPAPVSEHSSAAT---IDQQ----AEGYTIFVANLLM-DA 288
Query: 290 APENSNVNEEAEG 302
PE +NE +G
Sbjct: 289 TPEQ--LNETFKG 299
Score = 249 (92.7 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 80/220 (36%), Positives = 118/220 (53%)
Query: 175 IVIEGEDLDNGPE-VCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPV----AQG- 228
+V E +D E V P+ + E + V+ P +V N H V + G
Sbjct: 153 VVQPTEQVDEVAEPVTIPTQQPEAKQTTENTVKKPERAVANG-HPKTQEDNVVNDKSNGV 211
Query: 229 DAPEKKSYASIVK--VMKGYNISSAAYVPAR-KARP-TPPNADQQSPAMAKPAPVPEASA 284
DAP KKS+A IV+ G ++ A PA+ K++P T P+A ++S A PAPV E S+
Sbjct: 212 DAP-KKSFAHIVQDLAQNGATFNAKAS-PAKPKSKPVTKPSAARESKA---PAPVSEHSS 266
Query: 285 LSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNK-QGY 343
++ ++++AEG +I+V NL T +L E FK FG I K+G+QVRS + +G
Sbjct: 267 AAT--------IDQQAEGYTIFVANLLMDATPEQLNETFKGFGAITKDGIQVRSYRLKGN 318
Query: 344 CFGFVAFETPGSVQSALEA---SPILIGDRPADVEAKRAN 380
CFGFV F + +V+ L+A S I IG+R +E KR N
Sbjct: 319 CFGFVTFASAEAVKLVLQAHKESAIRIGNRRVSIEEKRGN 358
>TAIR|locus:2172472 [details] [associations]
symbol:AT5G43960 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISS] [GO:0006499 "N-terminal protein myristoylation"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166 GO:GO:0006810
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 InterPro:IPR018222
PROSITE:PS50177 EMBL:AB006703 HOGENOM:HOG000239086 EMBL:AY080755
EMBL:AY114017 IPI:IPI00523493 RefSeq:NP_199209.1 UniGene:At.24860
ProteinModelPortal:Q9FND0 SMR:Q9FND0 IntAct:Q9FND0 STRING:Q9FND0
PaxDb:Q9FND0 PRIDE:Q9FND0 EnsemblPlants:AT5G43960.1 GeneID:834419
KEGG:ath:AT5G43960 TAIR:At5g43960 eggNOG:NOG295220
InParanoid:Q9FND0 OMA:INSVESW PhylomeDB:Q9FND0
ProtClustDB:CLSN2686872 ArrayExpress:Q9FND0 Genevestigator:Q9FND0
Uniprot:Q9FND0
Length = 450
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 98/302 (32%), Positives = 152/302 (50%)
Query: 7 SPAPSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRI 66
+P P A VG+ FV QYY +L Q P L+H+FY + S R D + S T ++ I++ +
Sbjct: 3 TPYPGATQVGSYFVGQYYQVLQQQPDLIHQFYSEPSRAIRIDGD-STETANSLLHIHNMV 61
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKD-NVKKKFTQTFFLAPQDKGGYFV 125
+SLN+ E+KT ++ +S+E GV+V+V+G + K+ + ++ F QTFFLAPQ+KG YFV
Sbjct: 62 MSLNFT--AIEVKTINSVESWEGGVLVVVSGSVKTKEFSNRRSFVQTFFLAPQEKG-YFV 118
Query: 126 LNDVFRFXXXXXXXXX--XXXXXXXXTAPTANVTEAPEPAHDQDHI----PAD--RAIVI 177
L+DVF F A T P+P D++ +D A+ I
Sbjct: 119 LSDVFLFVDEGTVYYHQPSYLSEIKHEAQLNPPTRHPDP-QVSDYVLEEEASDYVNAVQI 177
Query: 178 EGEDLDNGPEVCDPSDKEEGSVVEDEIV--EPPSNSVQNEVHASVDSAPVAQGDAPEKK- 234
+ +DL + + + + + EDE+ E P V +V +APV + + K
Sbjct: 178 K-DDLVDKYSLQEDQHQPQHEDYEDEVAIEETPREEVAVDVVHEHRAAPVEEPVGEKSKM 236
Query: 235 SYASIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAP-EN 293
SYASI+KV K AA VP +P+ + Q +P P L++ AP +
Sbjct: 237 SYASILKVAK-----EAATVPVAATQPSYNKSSQDINEWDQPMRTPSPQ-LAAPLAPIQQ 290
Query: 294 SN 295
SN
Sbjct: 291 SN 292
Score = 244 (91.0 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 75/196 (38%), Positives = 109/196 (55%)
Query: 201 EDEIV--EPPSNSVQNEVHASVDSAPVAQGDAPEKK-SYASIVKVMK-GYNISSAAYVPA 256
EDE+ E P V +V +APV + + K SYASI+KV K + AA P+
Sbjct: 200 EDEVAIEETPREEVAVDVVHEHRAAPVEEPVGEKSKMSYASILKVAKEAATVPVAATQPS 259
Query: 257 RKARPTPPNA-DQQ----SPAMAKP-APVPEASALS--SD-GAP-ENSNVNEEAEGCSIY 306
N DQ SP +A P AP+ ++++ + SD GA E+ + E+ E S+Y
Sbjct: 260 YNKSSQDINEWDQPMRTPSPQLAAPLAPIQQSNSSTYVSDYGAEAEDGSGFEDFEFKSVY 319
Query: 307 VRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQ--GYCFGFVAFETPGSVQSALEASP 364
VRNL +++E+EE FK FG IK +GV +R+ K G C+ FV FE SV++A++ASP
Sbjct: 320 VRNLPSDISASEIEEEFKNFGTIKPDGVFLRTRKDVMGVCYAFVEFEDMTSVENAIKASP 379
Query: 365 ILIGDRPADVEAKRAN 380
I +G R +E +R N
Sbjct: 380 IYLGGRQVYIEERRPN 395
>TAIR|locus:2098555 [details] [associations]
symbol:AT3G07250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=ISS] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 GO:GO:0009506 EMBL:CP002686 GO:GO:0000166
GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
InterPro:IPR012463 Pfam:PF07897 InterPro:IPR018222 PROSITE:PS50177
IPI:IPI00518200 RefSeq:NP_187381.2 UniGene:At.53212
ProteinModelPortal:F4JED3 SMR:F4JED3 PRIDE:F4JED3
EnsemblPlants:AT3G07250.1 GeneID:819913 KEGG:ath:AT3G07250
Uniprot:F4JED3
Length = 1294
Score = 213 (80.0 bits), Expect = 2.9e-27, Sum P(2) = 2.9e-27
Identities = 47/118 (39%), Positives = 71/118 (60%)
Query: 15 VGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSLNYEDY 74
VG+ F QYY+ L +P +++ Y+D S +SRP +G+M T K + R S D
Sbjct: 281 VGDEFARQYYNTLQNAPENLYKLYKDKSTISRPGLDGTMRVFTLSKDLKWR--SPGSFD- 337
Query: 75 TAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDVFRF 132
+ +I + +QDS ++G++V+V G LT + + FTQ FFL PQ+KG Y V D+FRF
Sbjct: 338 SVKITSVTSQDSLKQGILVVVYGYLTFNERPARHFTQVFFLVPQEKG-YIVCTDMFRF 394
Score = 187 (70.9 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 44/115 (38%), Positives = 67/115 (58%)
Query: 19 FVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDR-ILSLNYEDYTAE 77
F E YY+ L SP ++ +Y+D S ++RP +G+M + T I D +LS D + E
Sbjct: 948 FSEHYYNNLQNSPEILPGYYKDVSKITRPGLDGTMRSSTLPDIIEDLDMLSPGGFD-SVE 1006
Query: 78 IKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDVFRF 132
+ + +QDS++KG+ V V G T + + FTQ F APQ+KG FV D+F+F
Sbjct: 1007 VTSVMSQDSHDKGIRVAVDGYFTFNERPARNFTQNFTFAPQEKG-LFVSTDMFKF 1060
Score = 173 (66.0 bits), Expect = 2.9e-27, Sum P(2) = 2.9e-27
Identities = 59/203 (29%), Positives = 90/203 (44%)
Query: 181 DLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIV 240
+L N PE+ K+ + + +S ++ +D D+ E S S
Sbjct: 955 NLQNSPEILPGYYKDVSKITRPGLDGTMRSSTLPDIIEDLDMLSPGGFDSVEVTSVMSQD 1014
Query: 241 KVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSD-----GAPENSN 295
KG ++ Y + RP N Q AP + +S+D G PE +
Sbjct: 1015 SHDKGIRVAVDGYFTFNE-RPAR-NFTQNFTF----APQEKGLFVSTDMFKFVGIPEANA 1068
Query: 296 VNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYCFGFVAFETPGS 355
A +I V+NL T +E AFK FG I++ GV+VR NK+ + +GFV F+ +
Sbjct: 1069 TIPPANNAAICVKNLPLNATIALVENAFKQFGEIRRGGVEVR-NKRSFSYGFVEFKEENA 1127
Query: 356 VQSALEASPILIGDRPADVEAKR 378
Q A++ASP+ I R VE KR
Sbjct: 1128 AQRAIKASPVTIDLRSVYVEKKR 1150
Score = 118 (46.6 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 289 GAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYCFGFV 348
G EN N A +++V+NL T+ +E AFK FGPIK+ GVQV + G FG V
Sbjct: 1183 GGNEN-NQEPRALYAAVHVKNLPPNVTTDWVENAFKQFGPIKRGGVQVSNRGVGNWFGNV 1241
Query: 349 AFETPGSVQSALEASPILI 367
F + + A+ +LI
Sbjct: 1242 KFVHAAAAERAVNPQVLLI 1260
Score = 118 (46.6 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 32/100 (32%), Positives = 52/100 (52%)
Query: 281 EASALSSDGAPENSN-VNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQV-RS 338
+A A + +G ++S + E+A I V++L T +E FK FGPIKK ++V
Sbjct: 530 DAGADTGNGNSQDSQAITEDAH---IRVKDLPPNATVALVESVFKQFGPIKKGRIRVINP 586
Query: 339 NKQGYCFGFVAFETPGSVQSALEASPILIGDRPADVEAKR 378
Y + FV FE + + A++ASP+ + VE K+
Sbjct: 587 ANSNYWYAFVEFEEADAAKRAIQASPLNVDGHTTYVEQKQ 626
Score = 118 (46.6 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 47/150 (31%), Positives = 69/150 (46%)
Query: 239 IVKVMKGYNISSAAY--VPARKARPTPPNADQQSPAMAKPAPVPEASALS-SDGAPENSN 295
+V KGY + + + V +A P A+ + + P E +AL S+ N
Sbjct: 378 LVPQEKGYIVCTDMFRFVDIPEANAAIPPAND---VIEEKVPETEGAALRVSEPNHGFDN 434
Query: 296 VNE---EAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYCFG---FVA 349
V + +EG +I + L T +E AFK FG I++ GV+VR N +C G +V
Sbjct: 435 VPKLSCASEGAAICAKKLPLDATIAFVENAFKQFGEIRRGGVEVRIN--WHCTGKYAYVE 492
Query: 350 FETPGSVQSALEASPILIGDRPADVEAKRA 379
FE + A+ ASPI I VE K A
Sbjct: 493 FEEAEAANRAIMASPISIDGYRTYVEKKYA 522
Score = 106 (42.4 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 25/79 (31%), Positives = 41/79 (51%)
Query: 299 EAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYCFGFVAFETPGSVQS 358
E+ S++++ L T +E+A K FGPI N + + + Y F FV FE
Sbjct: 741 ESHEASVFLKRLPLDVTFALIEDALKKFGPI--NAISIIKSGPLYKFAFVDFEKADVANR 798
Query: 359 ALEASPILIGDRPADVEAK 377
A+ ASP+ I ++ +V+ K
Sbjct: 799 AIMASPVRICEKNVNVQKK 817
>TAIR|locus:2026423 [details] [associations]
symbol:AT1G69250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006810 "transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISS] [GO:0006499 "N-terminal protein myristoylation"
evidence=RCA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
EMBL:CP002684 GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 EMBL:AC008262 EMBL:AC018364
InterPro:IPR018222 PROSITE:PS50177 HOGENOM:HOG000239086
EMBL:BT006208 IPI:IPI00537284 PIR:E96716 RefSeq:NP_177085.1
UniGene:At.25325 ProteinModelPortal:Q9LDI9 SMR:Q9LDI9 STRING:Q9LDI9
PRIDE:Q9LDI9 EnsemblPlants:AT1G69250.1 GeneID:843256
KEGG:ath:AT1G69250 TAIR:At1g69250 InParanoid:Q9LDI9 OMA:PIKENGI
PhylomeDB:Q9LDI9 ProtClustDB:CLSN2682528 Genevestigator:Q9LDI9
Uniprot:Q9LDI9
Length = 427
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 84/277 (30%), Positives = 142/277 (51%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSL 69
PSAQ + FV QYYH+L Q P R Y D+S++SRPD G+M + T+++AIN ILS
Sbjct: 8 PSAQDIAAEFVRQYYHVLGQLPHEARRLYVDASVVSRPDVTGTMMSFTSVEAINKHILSC 67
Query: 70 NYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDV 129
++E+ E+ + D+Q+S E G+ ++V G +TGKDN ++KF+Q F+LA Q+ VLND+
Sbjct: 68 DFENTKFEVLSVDSQNSLEDGIFIMVIGFMTGKDNQRRKFSQMFYLARQNT--LVVLNDM 125
Query: 130 FRFXXXXXXXXXXXXXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIEGEDLDNGPEVC 189
R+ P VTE PA D + ++ +++ + +
Sbjct: 126 LRYVDQEDSSTTET--------PCEPVTEIVRPA---DGLKKAEKTELKQKNVASVEKSV 174
Query: 190 DPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVM-KG--- 245
+ + ++ + +++ ++ +V + D+AP G K+S+A IV M K
Sbjct: 175 NAAVEKNAAPLDNGKMKQSEKAVITQKVTEPDAAPQPDG---AKRSFADIVGSMAKNAAP 231
Query: 246 YNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEA 282
+ + S P +K P + + A KPA V ++
Sbjct: 232 FQVKSPVQAPVQK--PKYVGQPRAAAAPQKPAYVSKS 266
Score = 220 (82.5 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 80/242 (33%), Positives = 112/242 (46%)
Query: 154 ANVTEAP-EPAHDQDHIPADRAIVIEGEDLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSV 212
++ TE P EP + PAD E +L V +K + VE P N
Sbjct: 134 SSTTETPCEPVTEIVR-PADGLKKAEKTELKQ-KNVASV-EKSVNAAVEKNAA-PLDNGK 189
Query: 213 QNEVHASVDSAPVAQGDA-PE----KKSYASIVKVMKGYNISSAAYVPARKARPTPPNAD 267
+ +V + V + DA P+ K+S+A IV G +AA + +P A
Sbjct: 190 MKQSEKAVITQKVTEPDAAPQPDGAKRSFADIV----GSMAKNAAPFQVK----SPVQAP 241
Query: 268 QQSPA-MAKP--APVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFK 324
Q P + +P A P+ A S +N E G SI+V NL +L E FK
Sbjct: 242 VQKPKYVGQPRAAAAPQKPAYVSKSIKKNDQKVIEVPGTSIFVANLPLNAMPPQLFELFK 301
Query: 325 IFGPIKKNGVQVRS---NKQGYCFGFVAFETPGSVQSALEAS---PILIGDRPADVEAKR 378
FGPIK+NG+QVRS N CFGF++FET SVQS L+A+ P ++ DR V+ K
Sbjct: 302 DFGPIKENGIQVRSSRGNANPVCFGFISFETVASVQSVLQAAKNTPFMLADRKLRVKEKE 361
Query: 379 AN 380
+
Sbjct: 362 VD 363
>ZFIN|ZDB-GENE-030131-7452 [details] [associations]
symbol:g3bp1 "GTPase activating protein (SH3
domain) binding protein 1" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-7452
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 HSSP:P09651
CTD:10146 HOVERGEN:HBG007211 EMBL:BC045874 IPI:IPI00501560
RefSeq:NP_956250.1 UniGene:Dr.7036 ProteinModelPortal:Q7ZVG3
STRING:Q7ZVG3 GeneID:335512 KEGG:dre:335512 NextBio:20810882
ArrayExpress:Q7ZVG3 Uniprot:Q7ZVG3
Length = 477
Score = 217 (81.4 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 49/128 (38%), Positives = 77/128 (60%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDRI 66
PSAQ+VG FV QYY +L+Q+P +HRFY ++SS + D+NG V I+ ++
Sbjct: 6 PSAQLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDNNGKPAEAVYGQSEIHKKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
++L++ D +I+ DA + +GV+V V G L+ +KF QTF LAP+ ++
Sbjct: 66 MALSFRDCHTKIRHVDAHATLNEGVVVQVLGGLSNNMQPMRKFMQTFVLAPEGTVANKFY 125
Query: 125 VLNDVFRF 132
V ND+FR+
Sbjct: 126 VHNDIFRY 133
Score = 116 (45.9 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 58/235 (24%), Positives = 91/235 (38%)
Query: 155 NVTEAPEPAHDQDHIPADRAIVIEGEDLDNGPEVCDPSDKEEGSVVEDEIVEP-PSNSVQ 213
+VT P+P + + P A+ ++ E + PEV +K + S + P+
Sbjct: 189 SVTPEPQPEPEVEVEPEPAAVELKAEPISQ-PEV-HVEEKTQRSPPSPTPADTAPTMPED 246
Query: 214 NEVH--ASVDSAPVAQGDA-PEKKSYASIVKVMKGY---NISSAAYVPA-RKARPTPPNA 266
N ASV S + G P +V+V + + A R R P
Sbjct: 247 NRPSSWASVTSKNLPPGGVVPATGVPPHVVRVPSAQPRVEVKTETQTTAQRPQRDQRPRD 306
Query: 267 DQQSPAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIF 326
+ P+ A P P G E + ++V N+ EL+E F+ +
Sbjct: 307 QRPGPSPAHRTPRPGVVREGESGESEVRRTVRYPDSHQLFVGNVPHDVDKNELKEFFEQY 366
Query: 327 GPIKKNGVQVRSNKQGYC--FGFVAFETPGSVQSALEASPI-LIGDRPADVEAKR 378
G + +++R N G FGFV F+ VQ L PI L GD +VE K+
Sbjct: 367 GTV----LELRINSGGKLPNFGFVVFDDSEPVQKILNNRPIKLRGDVRLNVEEKK 417
Score = 44 (20.5 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 27/110 (24%), Positives = 40/110 (36%)
Query: 196 EGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAP-EKKSYASIVKVMKGYNISSAAYV 254
EG+V V Q+EV DS P + + E+ +V++ SS Y
Sbjct: 117 EGTVANKFYVHNDIFRYQDEVFGDSDSEPPEESEEDVEELERVHSPEVVQ--EESSGYYE 174
Query: 255 PARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAPENSNVNEEAEGCS 304
P P ++ +P P PE PE + V +AE S
Sbjct: 175 QTPCVEPEVPQ--EEVSVTPEPQPEPEVEV-----EPEPAAVELKAEPIS 217
>UNIPROTKB|E2QYY6 [details] [associations]
symbol:G3BP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006810 "transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 CTD:9908
RefSeq:XP_855995.1 ProteinModelPortal:E2QYY6
Ensembl:ENSCAFT00000013317 GeneID:478429 KEGG:cfa:478429
NextBio:20853768 Uniprot:E2QYY6
Length = 449
Score = 276 (102.2 bits), Expect = 7.4e-23, P = 7.4e-23
Identities = 112/390 (28%), Positives = 174/390 (44%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP+ ++
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTEA-PEPAHDQDHIPADRAIVIEGEDLD 183
V ND+FR+ E P P Q++ AD E +
Sbjct: 126 VHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQEN--ADSGYY-EAHPVA 182
Query: 184 NGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVM 243
NG E +P EE S E E EP S + E+ V+ + + E+KS +
Sbjct: 183 NGIE--EPL--EESSH-EPE-PEPDSETKTEELKPQVEEKNLEE---LEEKSTSP--PPA 231
Query: 244 KGYNISSAAYVPARKARPT----PPNADQQSPAMAKPA-----PVPEASALSSDGAPENS 294
+ ++ P +A+P PP +Q P +P P P L + + +N
Sbjct: 232 EPVSLPQEPPKPRVEAKPEVQSQPPRVREQRPR-ERPGFPPRGPRPGRGDLEQNES-DNR 289
Query: 295 NVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYC-----FGFVA 349
+ + ++V NL EL+E F FG N V++R N +G FGFV
Sbjct: 290 RIIRYPDSHQLFVGNLPHDIDENELKEFFMSFG----NVVELRINTKGVGGKLPNFGFVV 345
Query: 350 FETPGSVQSALEASPILI-GDRPADVEAKR 378
F+ VQ L A PI+ G+ +VE K+
Sbjct: 346 FDDSEPVQRILIAKPIMFRGEVRLNVEEKK 375
>UNIPROTKB|E1C769 [details] [associations]
symbol:G3BP2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330
GO:GO:0003676 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 CTD:9908 OMA:MEQNESD EMBL:AADN02008996
IPI:IPI00597302 RefSeq:XP_420536.2 UniGene:Gga.10005
ProteinModelPortal:E1C769 Ensembl:ENSGALT00000017688 GeneID:422576
KEGG:gga:422576 NextBio:20825190 Uniprot:E1C769
Length = 482
Score = 224 (83.9 bits), Expect = 7.9e-23, Sum P(2) = 7.9e-23
Identities = 77/301 (25%), Positives = 131/301 (43%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPDFLHRFYGRNSSYVHGGLDASGKPQEAVYGQAEIHKKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
+SL + + +I+ DA + GV+V V G L+ +KF QTF LAP+ ++
Sbjct: 66 MSLQFSECHTKIRHVDAHATLSDGVVVQVMGELSNNGQPMRKFMQTFVLAPEGSVPNKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTE---APEPAHDQ------DHIPADRAI 175
V ND+FR+ E +PEP + ++ P I
Sbjct: 126 VHNDIFRYEDEVFGDSEGELDEESEEEVEEEQEERQPSPEPVQENASSTYYENHPVTNGI 185
Query: 176 --VIEGEDLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEK 233
+E + PE+ + EE ++ E+ E ++ + + PV+ P K
Sbjct: 186 EEALEESSHEPEPELESETKPEE---LKTEVEEKALEELEEKSPSPPPVEPVSLPQEPPK 242
Query: 234 K-SYASIVK--VMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGA 290
S+AS+ + +SS+ P KA + P + + A ++P V E G
Sbjct: 243 AFSWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVETKPEAQSQPPRVREQRPRERPGF 302
Query: 291 P 291
P
Sbjct: 303 P 303
Score = 104 (41.7 bits), Expect = 7.9e-23, Sum P(2) = 7.9e-23
Identities = 38/131 (29%), Positives = 57/131 (43%)
Query: 258 KARPTPPNADQQSPAMAKPAPVPEASALSSDGAPENSNVNEEA----EGCSIYVRNLAFT 313
+A+ PP +Q P +P P +N + N + ++V NL
Sbjct: 283 EAQSQPPRVREQRPR-ERPGFPPRGPRPGRGDVEQNESDNRRIIRYPDSHQLFVGNLPHD 341
Query: 314 TTSTELEEAFKIFGPIKKNGVQVRSNKQGYC-----FGFVAFETPGSVQSALEASPILI- 367
+EL+E F FG N V++R N +G FGFV F+ VQ L A PI+
Sbjct: 342 IDESELKEFFMSFG----NVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILVAKPIMFR 397
Query: 368 GDRPADVEAKR 378
G+ +VE K+
Sbjct: 398 GEVRLNVEEKK 408
>UNIPROTKB|Q2KJ17 [details] [associations]
symbol:G3BP2 "GTPase activating protein (SH3 domain)
binding protein 2" species:9913 "Bos taurus" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136
PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0000166
GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR018222
PROSITE:PS50177 eggNOG:NOG324333 GeneTree:ENSGT00390000011365
HOGENOM:HOG000220838 HOVERGEN:HBG007211 CTD:9908 OMA:MEQNESD
EMBL:DAAA02018118 EMBL:BC105567 IPI:IPI00708814
RefSeq:NP_001039920.1 UniGene:Bt.87528 STRING:Q2KJ17
Ensembl:ENSBTAT00000018663 GeneID:539249 KEGG:bta:539249
NextBio:20877877 Uniprot:Q2KJ17
Length = 449
Score = 273 (101.2 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 108/389 (27%), Positives = 169/389 (43%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP+ ++
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTEA-PEPAHDQDHIPADRAIVIEGEDLD 183
V ND+FR+ E P P Q++ + E +
Sbjct: 126 VHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENANSG---YYEAHPVT 182
Query: 184 NGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVM 243
NG E +P EE S E E EP S + E+ PV + + E + ++
Sbjct: 183 NGIE--EPL--EESSH-EPE-PEPESETKTEEL-----KPPVEEKNLEELEEKSASPPPA 231
Query: 244 KGYNISSAAYVPARKARPT----PPNADQQSPAMAKPAPVPEASALSSDGAPENSNVNEE 299
+ ++ P +A+P PP +Q P +P P +N + N
Sbjct: 232 EPVSLPQEPPKPRVEAKPEVQSQPPRVREQRPR-ERPGFPPRGPRPGRGDIEQNESDNRR 290
Query: 300 A----EGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYC-----FGFVAF 350
+ ++V NL EL+E F FG N V++R N +G FGFV F
Sbjct: 291 IIRYPDSHQLFVGNLPHDIDENELKEFFMSFG----NVVELRINTKGVGGKLPNFGFVVF 346
Query: 351 ETPGSVQSALEASPILI-GDRPADVEAKR 378
+ VQ L A PI+ G+ +VE K+
Sbjct: 347 DDSEPVQRILIAKPIMFRGEVRLNVEEKK 375
>UNIPROTKB|I3LPH5 [details] [associations]
symbol:G3BP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330
GO:GO:0003676 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 CTD:9908 OMA:MEQNESD EMBL:CU467763
RefSeq:XP_003357027.1 Ensembl:ENSSSCT00000026131 GeneID:100621975
KEGG:ssc:100621975 Uniprot:I3LPH5
Length = 448
Score = 269 (99.8 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 102/389 (26%), Positives = 169/389 (43%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP+ ++
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTE---APEPAHDQD------HIPADRAI 175
V ND+FR+ E PEP + + H P I
Sbjct: 126 VHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPTPEPVQETNSGYYEAH-PVTNGI 184
Query: 176 VIEGEDLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKKS 235
E+ + PE +P + + ++ ++ E ++ + + + PV+ P K
Sbjct: 185 EEPLEESSHEPEP-EPESETKTEELKPQVEEKNLEELEEKSTSPPPAEPVSLPQEPPKPR 243
Query: 236 YASIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAPENSN 295
+ +V S V R+ RP ++ P P P + + + +N
Sbjct: 244 VETKPEVQ-----SQPPRV--REQRP------RERPGFPPRGPRPGRGDIEQNES-DNRR 289
Query: 296 VNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYC-----FGFVAF 350
+ + ++V NL EL+E F FG N V++R N +G FGFV F
Sbjct: 290 IIRYPDSHQLFVGNLPHDIDENELKEFFMSFG----NVVELRINTKGVGGKLPNFGFVVF 345
Query: 351 ETPGSVQSALEASPILI-GDRPADVEAKR 378
+ VQ L A PI+ G+ +VE K+
Sbjct: 346 DDSEPVQRILIAKPIMFRGEVRLNVEEKK 374
>ZFIN|ZDB-GENE-040426-2698 [details] [associations]
symbol:zgc:56304 "zgc:56304" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-040426-2698 GO:GO:0000166 GO:GO:0006810
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 InterPro:IPR018222
PROSITE:PS50177 eggNOG:NOG324333 HOGENOM:HOG000220838
HOVERGEN:HBG007211 OrthoDB:EOG4XWFZ0 EMBL:BC097071 IPI:IPI00772318
UniGene:Dr.31694 ProteinModelPortal:Q4V942 STRING:Q4V942
InParanoid:Q4V942 ArrayExpress:Q4V942 Uniprot:Q4V942
Length = 501
Score = 229 (85.7 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 84/290 (28%), Positives = 133/290 (45%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMTTVTTMKA-INDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + DSNG +A I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPDYLHRFYGRNSSYVHGGLDSNGKPEEAVYGQAEIHKKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKG--GYF 124
+SL + + +I+ DA + GV+V V G L+ ++F QTF LAP+ ++
Sbjct: 66 MSLQFSECHTKIRHVDAHATLGDGVVVQVMGELSNSGRPMRRFMQTFVLAPEGSAVNKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTE---APEPAHDQDHIPADRAIVIEGED 181
V ND+FR+ E +PEPA D+ P+
Sbjct: 126 VHNDIFRYEEEVFGDSEAELGESEEEEVEEEPVETHASPEPAQDR---PSSTTYYEPPPP 182
Query: 182 LDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQN-EVHASVDSA-PVAQGDAPEKKSYASI 239
+ NG E +E VE E VEP + + Q E S ++ VA+ + PE++ +
Sbjct: 183 VSNGVE---EQQEEAVPEVEPE-VEPEALASQEPEAELSTEAELQVAEAE-PEEEE--KL 235
Query: 240 VKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDG 289
+ +G + A P + P PP A S A+ +P A AL + G
Sbjct: 236 PEEERG-STPGLALTPPPQT-PEPPKAF--SWALVTSKNLPPAGALPASG 281
Score = 86 (35.3 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 28/80 (35%), Positives = 40/80 (50%)
Query: 305 IYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYC-----FGFVAFETPGSVQSA 359
++V NL EL++ F FG N V++R N +G FGFV F+ VQ
Sbjct: 365 LFVGNLPHDIDEGELKDFFMTFG----NVVEMRINTKGVGGKLPNFGFVVFDDSDPVQRI 420
Query: 360 LEASPILI-GDRPADVEAKR 378
L A PI+ G+ +VE K+
Sbjct: 421 LGAKPIMFRGEVRLNVEEKK 440
>RGD|1309571 [details] [associations]
symbol:G3bp2 "GTPase activating protein (SH3 domain) binding
protein 2" species:10116 "Rattus norvegicus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 RGD:1309571 GO:GO:0000166 GO:GO:0006810
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 InterPro:IPR018222
PROSITE:PS50177 eggNOG:NOG324333 GeneTree:ENSGT00390000011365
HOGENOM:HOG000220838 HOVERGEN:HBG007211 CTD:9908 EMBL:CH474060
EMBL:BC079225 IPI:IPI00464529 RefSeq:NP_001014011.1
UniGene:Rn.198360 MINT:MINT-7138399 STRING:Q6AY21
Ensembl:ENSRNOT00000003346 GeneID:305240 KEGG:rno:305240
UCSC:RGD:1309571 NextBio:654241 Genevestigator:Q6AY21
Uniprot:Q6AY21
Length = 449
Score = 267 (99.0 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 107/386 (27%), Positives = 167/386 (43%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP+ ++
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 125
Query: 125 VLNDVFRFXXXXXXXXX-XXXXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIEGEDLD 183
V ND+FR+ P P Q++ A+ A E +
Sbjct: 126 VHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEDRQPSPEPVQEN--ANSAYY-EAHPVT 182
Query: 184 NGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVM 243
NG E +P EE S E E EP S + E+ + + + + EK + +
Sbjct: 183 NGIE--EPL--EESSH-EPE-PEPESETKTEELKPQAEEKHLEELE--EKSATPPPTEPA 234
Query: 244 KGYNISSAAYVPAR-KARPTPPNADQQSPAMAKPAPVPEASALSSDGAPENSNVNEEA-- 300
V A+ + + PP +Q P +P P +N + N
Sbjct: 235 SLPQEPPKPRVDAKPEVQSQPPRVREQRPR-ERPGFPPRGPRPGRGDTEQNDSDNRRIIR 293
Query: 301 --EGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYC-----FGFVAFETP 353
+ ++V NL EL+E F FG N V++R N +G FGFV F+
Sbjct: 294 YPDSHQLFVGNLPHDIDENELKEFFMSFG----NVVELRINTKGVGGKLPNFGFVVFDDS 349
Query: 354 GSVQSALEASPILI-GDRPADVEAKR 378
VQ L A PI+ G+ +VE K+
Sbjct: 350 EPVQRILIAKPIMFRGEVRLNVEEKK 375
>POMBASE|SPBP8B7.11 [details] [associations]
symbol:nxt3 "ubiquitin protease cofactor Glp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0016579 "protein deubiquitination"
evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0060628 "regulation of ER to Golgi vesicle-mediated transport"
evidence=ISO] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
PomBase:SPBP8B7.11 GO:GO:0005829 GO:GO:0000166 EMBL:CU329671
Gene3D:3.30.70.330 GenomeReviews:CU329671_GR GO:GO:0003723
GO:GO:0051028 GO:GO:0060628 GO:GO:0016579 OrthoDB:EOG4N33ZJ
InterPro:IPR018222 PROSITE:PS50177 eggNOG:NOG324333 PIR:T40805
RefSeq:NP_596518.1 ProteinModelPortal:O94260 IntAct:O94260
STRING:O94260 PRIDE:O94260 EnsemblFungi:SPBP8B7.11.1 GeneID:2541364
KEGG:spo:SPBP8B7.11 OMA:ATENNFA NextBio:20802473 Uniprot:O94260
Length = 434
Score = 263 (97.6 bits), Expect = 6.0e-21, P = 6.0e-21
Identities = 99/387 (25%), Positives = 161/387 (41%)
Query: 8 PAPSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRIL 67
P +G FV++YY L++ P +H FY S L D S++ + I+++IL
Sbjct: 11 PVLGKDEIGWMFVQEYYTYLNKEPNRLHCFYTKKSTLIHGDEGESISLCHGQQEIHNKIL 70
Query: 68 SLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLN 127
L++++ I D+ S G+++ V G ++ K + +KF QTFFLA Q G YFVLN
Sbjct: 71 DLDFQNCKVLISNVDSLASSNGGIVIQVLGEMSNKGKLSRKFAQTFFLAEQPNG-YFVLN 129
Query: 128 DVFRFXXXXXXXXXXXXXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIEG--ED---L 182
D+FRF Q+H+P+ + EG +D
Sbjct: 130 DIFRFLREDVEEEEESPDAVEKEKKDVASEPYVNGVQSQEHLPSAKE---EGHYQDPAAT 186
Query: 183 DNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKV 242
+N E S+ + + P +Q ASV S Q + + ++ S K
Sbjct: 187 ENNFATAALISNETDSLNQATLAVPEEPVIQ-VTEASVPSFVSQQENQLQDEALTSNSKN 245
Query: 243 MKGYNISSAAYVPARK------ARPTPPNADQQSPAMAKPAPVPEASALSSDG-----AP 291
S A A K AR P Q S + +++D AP
Sbjct: 246 ADAIGASDANVATAPKSWADLIARNHPDVKSQASVSSTASTTGQTVKGVNADQTQQPTAP 305
Query: 292 ENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYCFGFVAFE 351
+ NE E S++V+N+ T+ L+ A IFGP+K ++ + ++G + V F
Sbjct: 306 YTQS-NELLE-TSVFVKNIPPETSDVSLKSAMSIFGPVK--AIEF-ARRKGTAY--VDFV 358
Query: 352 TPGSVQSALEASPILIGDRPADVEAKR 378
VQ AL + I + ++E +R
Sbjct: 359 NHECVQLALNKKTLQINNATLNIEERR 385
>FB|FBgn0015778 [details] [associations]
symbol:rin "rasputin" species:7227 "Drosophila melanogaster"
[GO:0017124 "SH3 domain binding" evidence=ISS] [GO:0001752
"compound eye photoreceptor fate commitment" evidence=IMP]
[GO:0007265 "Ras protein signal transduction" evidence=IGI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016318 "ommatidial
rotation" evidence=IMP] [GO:0003729 "mRNA binding" evidence=ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 GO:GO:0005829 GO:GO:0007265 GO:GO:0000166
GO:GO:0005811 GO:GO:0006810 GO:GO:0003729 Gene3D:3.30.70.330
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 GO:GO:0001752
InterPro:IPR018222 PROSITE:PS50177 GO:GO:0016318 eggNOG:NOG324333
HSSP:P33331 EMBL:AF231031 ProteinModelPortal:Q9NH72 SMR:Q9NH72
IntAct:Q9NH72 STRING:Q9NH72 PaxDb:Q9NH72 PRIDE:Q9NH72
FlyBase:FBgn0015778 InParanoid:Q9NH72 OrthoDB:EOG42RBPK
ArrayExpress:Q9NH72 Bgee:Q9NH72 Uniprot:Q9NH72
Length = 690
Score = 232 (86.7 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 52/126 (41%), Positives = 72/126 (57%)
Query: 7 SPAPSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRI 66
S PS Q VG FV QYY +L+++P +HRFY +S +G V + I++RI
Sbjct: 8 SQQPSPQSVGREFVRQYYTLLNKAPNHLHRFYNHNSSYI----HGESKLVVGQREIHNRI 63
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVL 126
LN+ D A+I DAQ + GV+V VTG L+ ++FTQTF LA Q Y+V
Sbjct: 64 QQLNFNDCHAKISQVDAQATLGNGVVVQVTGELSNDGQPMRRFTQTFVLAAQSPKKYYVH 123
Query: 127 NDVFRF 132
ND+FR+
Sbjct: 124 NDIFRY 129
Score = 69 (29.3 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 24/108 (22%), Positives = 45/108 (41%)
Query: 276 PAPVPEASALSSDGAPE---NSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPI--- 329
P P S ++ G E +SN + + +++ N+ + +L E F FG +
Sbjct: 463 PLPQRNNSIRNNKGDFEQRRSSNTQQFGDNQQLFLGNIPHHASEDDLREIFSRFGNVLEL 522
Query: 330 ---KKNGVQVRSNKQGYC-FGFVAFETPGSVQSALEASPILIGDRPAD 373
K G +V + +GF+ ++ P +VQ L P+ + D
Sbjct: 523 RILSKAGNKVPPGMRSPLNYGFITYDDPEAVQKCLANCPLYFPENSPD 570
>MGI|MGI:2442040 [details] [associations]
symbol:G3bp2 "GTPase activating protein (SH3 domain) binding
protein 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360 EMBL:U65313
MGI:MGI:2442040 GO:GO:0005737 GO:GO:0007264 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0051028 InterPro:IPR018222
PROSITE:PS50177 eggNOG:NOG324333 HOGENOM:HOG000220838
HOVERGEN:HBG007211 OrthoDB:EOG4XWFZ0 CTD:9908 OMA:MEQNESD
EMBL:AF145285 EMBL:AK145697 IPI:IPI00124245 IPI:IPI00331295
RefSeq:NP_001074263.1 RefSeq:NP_001074266.1 RefSeq:NP_035946.2
UniGene:Mm.290530 UniGene:Mm.473827 ProteinModelPortal:P97379
SMR:P97379 STRING:P97379 PhosphoSite:P97379 PaxDb:P97379
PRIDE:P97379 Ensembl:ENSMUST00000113127 Ensembl:ENSMUST00000164378
Ensembl:ENSMUST00000167918 Ensembl:ENSMUST00000169094 GeneID:23881
KEGG:mmu:23881 InParanoid:P97379 ChiTaRS:G3BP2 NextBio:303611
Bgee:P97379 Genevestigator:P97379 GermOnline:ENSMUSG00000029405
Uniprot:P97379
Length = 482
Score = 233 (87.1 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 76/299 (25%), Positives = 130/299 (43%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP+ ++
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTE---APEPAHDQ------DHIPADRAI 175
V ND+FR+ + +PEP + D P I
Sbjct: 126 VHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEDRQPSPEPVQENANSAYYDAHPVTNGI 185
Query: 176 VIEGEDLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKK- 234
E+ + PE +P + + ++ ++ E ++ + + P + P K
Sbjct: 186 EEPLEESSHEPEP-EPESETKTEELKPQVEEKHLEELEEKSATPPPAEPASLPQEPPKAF 244
Query: 235 SYASIVK--VMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAP 291
S+AS+ + +SS+ P KA + P D + ++P V E G P
Sbjct: 245 SWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVDAKPEVQSQPPRVREQRPRERPGFP 303
>UNIPROTKB|Q9UN86 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA;NAS] [GO:0003723 "RNA binding"
evidence=NAS] [GO:0007265 "Ras protein signal transduction"
evidence=NAS] [GO:0007253 "cytoplasmic sequestering of NF-kappaB"
evidence=NAS] [GO:0030159 "receptor signaling complex scaffold
activity" evidence=NAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=TAS] [GO:0051056 "regulation of small GTPase mediated
signal transduction" evidence=TAS] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136
PROSITE:PS50102 SMART:SM00360 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0007265 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0051056
GO:GO:0003723 EMBL:CH471057 GO:GO:0030159 GO:GO:0051028
InterPro:IPR018222 PROSITE:PS50177 GO:GO:0007253 eggNOG:NOG324333
HOGENOM:HOG000220838 HOVERGEN:HBG007211 OrthoDB:EOG4XWFZ0
EMBL:AF145284 EMBL:AB014560 EMBL:AF051311 EMBL:AF053535
EMBL:AK291786 EMBL:BC011731 IPI:IPI00009057 IPI:IPI00179890
RefSeq:NP_036429.2 RefSeq:NP_987100.1 RefSeq:NP_987101.1
UniGene:Hs.303676 ProteinModelPortal:Q9UN86 SMR:Q9UN86
IntAct:Q9UN86 MINT:MINT-3082700 STRING:Q9UN86 PhosphoSite:Q9UN86
DMDM:116242482 PaxDb:Q9UN86 PRIDE:Q9UN86 Ensembl:ENST00000357854
Ensembl:ENST00000359707 Ensembl:ENST00000395719 GeneID:9908
KEGG:hsa:9908 UCSC:uc003hir.3 UCSC:uc003hit.3 CTD:9908
GeneCards:GC04M076567 HGNC:HGNC:30291 HPA:HPA018304 HPA:HPA018425
neXtProt:NX_Q9UN86 PharmGKB:PA162389134 InParanoid:Q9UN86
OMA:MEQNESD PhylomeDB:Q9UN86 GenomeRNAi:9908 NextBio:37365
ArrayExpress:Q9UN86 Bgee:Q9UN86 CleanEx:HS_G3BP2
Genevestigator:Q9UN86 GermOnline:ENSG00000138757 Uniprot:Q9UN86
Length = 482
Score = 232 (86.7 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 76/299 (25%), Positives = 131/299 (43%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP+ ++
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTE---APEPAHDQDHI------PADRAI 175
V ND+FR+ E +PEP + + P I
Sbjct: 126 VHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENANSGYYEAHPVTNGI 185
Query: 176 VIEGEDLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKK- 234
E+ + PE +P + + ++ ++ E ++ + + PV+ P K
Sbjct: 186 EEPLEESSHEPEP-EPESETKTEELKPQVEEKNLEELEEKSTTPPPAEPVSLPQEPPKAF 244
Query: 235 SYASIVK--VMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAP 291
S+AS+ + +SS+ P KA + P + + ++P V E G P
Sbjct: 245 SWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVEAKPEVQSQPPRVREQRPRERPGFP 303
>UNIPROTKB|F6XCI1 [details] [associations]
symbol:G3BP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006810 "transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 OMA:MEQNESD Ensembl:ENSCAFT00000013317
EMBL:AAEX03016672 EMBL:AAEX03016673 Uniprot:F6XCI1
Length = 490
Score = 232 (86.7 bits), Expect = 6.9e-17, P = 6.9e-17
Identities = 76/299 (25%), Positives = 132/299 (44%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 14 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 73
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP+ ++
Sbjct: 74 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 133
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTE---APEPAHDQ------DHIPADRAI 175
V ND+FR+ E +PEP + + P I
Sbjct: 134 VHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENADSGYYEAHPVANGI 193
Query: 176 VIEGEDLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKK- 234
E+ + PE +P + + ++ ++ E ++ + + + PV+ P K
Sbjct: 194 EEPLEESSHEPEP-EPDSETKTEELKPQVEEKNLEELEEKSTSPPPAEPVSLPQEPPKAF 252
Query: 235 SYASIVK--VMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAP 291
S+AS+ + +SS+ P KA + P + + ++P V E G P
Sbjct: 253 SWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVEAKPEVQSQPPRVREQRPRERPGFP 311
>ASPGD|ASPL0000013038 [details] [associations]
symbol:AN8268 species:162425 "Emericella nidulans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 EMBL:BN001302 OMA:YPIYIRG InterPro:IPR018222
PROSITE:PS50177 EMBL:AACD01000145 eggNOG:NOG324333
RefSeq:XP_681537.1 ProteinModelPortal:Q5ATW2
EnsemblFungi:CADANIAT00004328 GeneID:2868982 KEGG:ani:AN8268.2
HOGENOM:HOG000159527 OrthoDB:EOG4RR9T6 Uniprot:Q5ATW2
Length = 526
Score = 230 (86.0 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 84/292 (28%), Positives = 126/292 (43%)
Query: 11 SAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSLN 70
S VG FVEQYY + +SP +H FY S L S+ KAI ++ L+
Sbjct: 56 SKDEVGWYFVEQYYTNMSRSPDKLHLFYSRRSQLVFGTEAESVPVAVGQKAIQEKFKQLD 115
Query: 71 YEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDVF 130
++D + DAQ S+E +++ V G ++ K +KF QTF LA Q G Y+VLNDVF
Sbjct: 116 FQDCKVRVLNVDAQASFEN-ILISVIGEISNKQEPSRKFVQTFVLAEQPNG-YYVLNDVF 173
Query: 131 RFXXXXXXXXXXXXXXXXXT------AP--TAN--VTEAPEPAHDQDHIPADRAIVIE-G 179
R+ AP TA +TE E D + A +E
Sbjct: 174 RYLVDEEEVAEDAAISSDTVEEPELQAPAQTAAGPITETEESKVDTEEAAAKIDEKLEKA 233
Query: 180 EDLDNGPEVCDPSDKEEGSVVED---EIVEPPSNSVQ--NEVHASVDS--APVAQGDAPE 232
E+ ++ + + + G+ + E+VE P+ + + E AS + AP A+ +AP
Sbjct: 234 EEAESEAPAAETAPQTNGTEQPEPAAEVVETPAPAAEVVPEKPASPEPSPAPPAEKEAPT 293
Query: 233 KKSYASIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASA 284
K+ V K + ++ A P P A + A PA P A A
Sbjct: 294 KEPAPPAKAVPKTWASIASKTGAAAPVVPAIPVAPVKPAPAAAPASQPAAPA 345
>MGI|MGI:1351465 [details] [associations]
symbol:G3bp1 "GTPase activating protein (SH3 domain) binding
protein 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IMP] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1351465 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006810 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0090305
GO:GO:0004386 GO:GO:0090090 GO:GO:0004519 GO:GO:0010494
InterPro:IPR018222 PROSITE:PS50177 CTD:10146 eggNOG:NOG324333
HOVERGEN:HBG007211 OMA:VVSNDME OrthoDB:EOG4XWFZ0 ChiTaRS:G3BP1
EMBL:AB001927 EMBL:BC021156 IPI:IPI00130095 RefSeq:NP_038744.1
UniGene:Mm.380129 UniGene:Mm.39631 UniGene:Mm.405739
ProteinModelPortal:P97855 SMR:P97855 STRING:P97855
PhosphoSite:P97855 PaxDb:P97855 PRIDE:P97855
Ensembl:ENSMUST00000018727 GeneID:27041 KEGG:mmu:27041
InParanoid:P97855 NextBio:304965 Bgee:P97855 Genevestigator:P97855
GermOnline:ENSMUSG00000018583 Uniprot:P97855
Length = 465
Score = 228 (85.3 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 81/308 (26%), Positives = 139/308 (45%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRP--DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L+Q+P ++HRFY +S + DSNG V K I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYAHGGLDSNGKPADAVYGQKEIHRKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
+S N+ + +I+ DA + GV+V V G L+ + ++F QTF LAP+ ++
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIE---GED 181
V ND+FR+ V E E + +P D + D
Sbjct: 126 VHNDIFRYQDEVFGGFVTEPQEESEE----EVEEPEERQQTPEVVPDDSGTFYDQTVSND 181
Query: 182 LDNGPE--VCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVD-SAP--VAQGDAPEKKSY 236
L+ E V +P + E E E EP S+ +++ A+++ +AP V + +P
Sbjct: 182 LEEHLEEPVVEPEPEPEP---EPE-PEPVSDIQEDKPEAALEEAAPDDVQKSTSPAPADV 237
Query: 237 ASIVKVMKGYNISSAAY--VPARKARP---TPPNADQQSPAMAKPAPVPEASALSSDGAP 291
A + ++ ++ +S +P A P TPP+ + + +P P+ S +
Sbjct: 238 APAQEDLRTFSWASVTSKNLPPSGAVPVTGTPPHVVKVPASQPRPESKPD-SQIPPQRPQ 296
Query: 292 ENSNVNEE 299
+ V E+
Sbjct: 297 RDQRVREQ 304
>UNIPROTKB|Q13283 [details] [associations]
symbol:G3BP1 "Ras GTPase-activating protein-binding protein
1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007265 "Ras
protein signal transduction" evidence=TAS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 EMBL:U32519 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0007265 GO:GO:0003677
GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0004003
GO:GO:0090305 GO:GO:0004519 InterPro:IPR018222 PROSITE:PS50177
GO:GO:0004004 CTD:10146 eggNOG:NOG324333 HOGENOM:HOG000220838
HOVERGEN:HBG007211 OMA:VVSNDME OrthoDB:EOG4XWFZ0 EMBL:BC006997
IPI:IPI00012442 RefSeq:NP_005745.1 RefSeq:NP_938405.1
UniGene:Hs.587054 PDB:3Q90 PDBsum:3Q90 ProteinModelPortal:Q13283
SMR:Q13283 IntAct:Q13283 MINT:MINT-5002789 STRING:Q13283
PhosphoSite:Q13283 DMDM:14916572 PaxDb:Q13283 PeptideAtlas:Q13283
PRIDE:Q13283 DNASU:10146 Ensembl:ENST00000356245
Ensembl:ENST00000394123 GeneID:10146 KEGG:hsa:10146 UCSC:uc003lum.3
GeneCards:GC05P151151 HGNC:HGNC:30292 HPA:HPA004052 MIM:608431
neXtProt:NX_Q13283 PharmGKB:PA162389105 InParanoid:Q13283
PhylomeDB:Q13283 ChiTaRS:G3BP1 GenomeRNAi:10146 NextBio:38391
ArrayExpress:Q13283 Bgee:Q13283 CleanEx:HS_G3BP1
Genevestigator:Q13283 GermOnline:ENSG00000145907 Uniprot:Q13283
Length = 466
Score = 227 (85.0 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 82/308 (26%), Positives = 136/308 (44%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L+Q+P ++HRFY ++SS + DSNG V K I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
+S N+ + +I+ DA + GV+V V G L+ + ++F QTF LAP+ ++
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXX--XXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIEG--E 180
V ND+FR+ + PE D D+A+V E
Sbjct: 126 VHNDIFRYQDEVFGGFVTEPQEESEEEVEEPEERQQTPEVVPDDSGTFYDQAVVSNDMEE 185
Query: 181 DLDNG---PEVCDPS---DKEEGSVVEDEIVEPP-SNSVQNEVHASVDSAP--VAQGDAP 231
L+ PE DP ++E S +++E EP + + S AP +AQ
Sbjct: 186 HLEEPVAEPEP-DPEPEPEQEPVSEIQEEKPEPVLEETAPEDAQKSSSPAPADIAQTVQE 244
Query: 232 EKKSYASIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAP 291
+ ++++ K N+ + VP PP+ + + +P PE S +
Sbjct: 245 DLRTFSWASVTSK--NLPPSGAVPVTGI---PPHVVKVPASQPRPESKPE-SQIPPQRPQ 298
Query: 292 ENSNVNEE 299
+ V E+
Sbjct: 299 RDQRVREQ 306
Score = 116 (45.9 bits), Expect = 0.00078, P = 0.00078
Identities = 60/239 (25%), Positives = 93/239 (38%)
Query: 152 PTANVTEAPEPAHDQDHIPADRAIVIEGEDLDNGPEVCDPSDKEEGSV-VEDEIVEPPSN 210
P A PEP +Q+ P I+ E + E P D ++ S +I +
Sbjct: 190 PVAEPEPDPEPEPEQE--PVSE---IQEEKPEPVLEETAPEDAQKSSSPAPADIAQTVQE 244
Query: 211 SVQNEVHASVDSAPVA-QGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNADQQ 269
++ ASV S + G P +VKV + P + P P DQ+
Sbjct: 245 DLRTFSWASVTSKNLPPSGAVPVTGIPPHVVKVPASQPRPESK--PESQIPPQRPQRDQR 302
Query: 270 S-------PAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEA 322
P P P+ EA G E + + +++ NL +EL++
Sbjct: 303 VREQRINIPPQRGPRPIREAG---EQGDIEPRRMVRHPDSHQLFIGNLPHEVDKSELKDF 359
Query: 323 FKIFGPIKKNGVQVRSNKQGYC--FGFVAFETPGSVQSALEASPILI-GDRPADVEAKR 378
F+ +G N V++R N G FGFV F+ VQ L PI+ G+ +VE K+
Sbjct: 360 FQSYG----NVVELRINSGGKLPNFGFVVFDDSEPVQKVLSNRPIMFRGEVRLNVEEKK 414
>UNIPROTKB|F1RQB6 [details] [associations]
symbol:G3BP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0000166 GO:GO:0006810
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 OMA:VVSNDME EMBL:CU570659
Ensembl:ENSSSCT00000018595 Uniprot:F1RQB6
Length = 464
Score = 226 (84.6 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 82/309 (26%), Positives = 138/309 (44%)
Query: 9 APSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDR 65
+PS +VG FV QYY +L+Q+P ++HRFY ++SS + DSNG V K I+ +
Sbjct: 4 SPSXLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRK 63
Query: 66 ILSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGY 123
+++ N+ + +I+ DA + GV+V V G L+ + ++F QTF LAP+ +
Sbjct: 64 VMAQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKF 123
Query: 124 FVLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIE---GE 180
+V ND+FR+ V E E + +P D +
Sbjct: 124 YVHNDIFRYQDEVFGGFVTEPQEESEE----EVEEPEERQQTPEVVPDDSGTFYDQTVSN 179
Query: 181 DLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASV--DSAP--VAQGDAPEKKSY 236
DL+ E +P + E E E + P + VQ E V ++AP V + +P
Sbjct: 180 DLEEHLE--EPVAEPEPDP-EPEPEQEPVSEVQEEKSEPVLEEAAPEDVQKSSSPAPADI 236
Query: 237 ASIVKV-MKGYNISSAAY--VPARKARPT---PPNADQQSPAMAKPAPVPEASALSSDGA 290
A V+ ++ ++ +S +P A P PP+ + + +P PE S +
Sbjct: 237 AQTVQEDLRTFSWASVTSKNLPPSGAVPVTGIPPHVVKVPASQPRPETKPE-SQIPPQRP 295
Query: 291 PENSNVNEE 299
+ V E+
Sbjct: 296 QRDQRVREQ 304
Score = 117 (46.2 bits), Expect = 0.00060, P = 0.00060
Identities = 60/239 (25%), Positives = 91/239 (38%)
Query: 152 PTANVTEAPEPAHDQDHIPADRAIVIEGEDLDNGPEVCDPSD-KEEGSVVEDEIVEPPSN 210
P A PEP +Q+ P ++ E + E P D ++ S +I +
Sbjct: 188 PVAEPEPDPEPEPEQE--PVSE---VQEEKSEPVLEEAAPEDVQKSSSPAPADIAQTVQE 242
Query: 211 SVQNEVHASVDSAPVA-QGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNADQQ 269
++ ASV S + G P +VKV P + P P DQ+
Sbjct: 243 DLRTFSWASVTSKNLPPSGAVPVTGIPPHVVKVPASQPRPETK--PESQIPPQRPQRDQR 300
Query: 270 S-------PAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEA 322
P P PV EA G E + + +++ NL EL++
Sbjct: 301 VREQRINVPPQRGPRPVREAG---EQGDVEPRRIVRHPDSHQLFIGNLPHEVDKLELKDF 357
Query: 323 FKIFGPIKKNGVQVRSNKQGYC--FGFVAFETPGSVQSALEASPILI-GDRPADVEAKR 378
F+ +G N V++R N G FGFV F+ VQ L PI+ G+ +VE K+
Sbjct: 358 FQNYG----NVVELRINSGGKLPNFGFVVFDDSEPVQKVLSNRPIMFRGEVRLNVEEKK 412
>UNIPROTKB|Q32LC7 [details] [associations]
symbol:G3BP "Ras GTPase-activating protein-binding protein
1" species:9913 "Bos taurus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0003729 "mRNA
binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0005829 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0090305 GO:GO:0004386 GO:GO:0004519 InterPro:IPR018222
PROSITE:PS50177 EMBL:BC109645 IPI:IPI00693236 RefSeq:NP_001032700.1
UniGene:Bt.5197 ProteinModelPortal:Q32LC7 STRING:Q32LC7
PRIDE:Q32LC7 Ensembl:ENSBTAT00000027067 GeneID:534214
KEGG:bta:534214 CTD:10146 eggNOG:NOG324333
GeneTree:ENSGT00390000011365 HOGENOM:HOG000220838
HOVERGEN:HBG007211 InParanoid:Q32LC7 OMA:VVSNDME OrthoDB:EOG4XWFZ0
NextBio:20876309 ArrayExpress:Q32LC7 Uniprot:Q32LC7
Length = 465
Score = 226 (84.6 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 80/291 (27%), Positives = 132/291 (45%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L+Q+P ++HRFY ++SS + DSNG V K I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
+S N+ + +I+ DA + GV+V V G L+ + ++F QTF LAP+ ++
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIE---GED 181
V ND+FR+ V E E + +P D + D
Sbjct: 126 VHNDIFRYQDEVFGGFITEPQEESEE----EVEEPEERQQTPEVVPDDSGTFYDQTVSND 181
Query: 182 LDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASV--DSAP--VAQGDAPEKKSYA 237
L+ E +P + E E E + P + VQ E V ++AP V + +P A
Sbjct: 182 LEEHLE--EPVAEPEPEP-EPEPEQEPVSEVQEEKSEPVLEETAPEDVQKSSSPAPADIA 238
Query: 238 SIVKV-MKGYNISSAAY--VPARKARPT---PPNADQQSPAMAKPAPVPEA 282
V+ ++ ++ +S +P A P PP+ + + +P PE+
Sbjct: 239 QTVQEDLRTFSWASVTSKNLPPSGAVPVTGIPPHVVKVPASQPRPESKPES 289
>UNIPROTKB|E2RN45 [details] [associations]
symbol:G3BP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006810 "transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 OMA:VVSNDME EMBL:AAEX03003083
Ensembl:ENSCAFT00000028303 Uniprot:E2RN45
Length = 441
Score = 224 (83.9 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 83/310 (26%), Positives = 138/310 (44%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L+Q+P ++HRFY ++SS + DSNG V K I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
+S N+ + +I+ DA + GV+V V G L+ + ++F QTF LAP+ ++
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXX--XXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIEGED- 181
V ND+FR+ + PE D D+++ + E+
Sbjct: 126 VHNDIFRYQDEVFGGFVTEPQEESEEEVEEPEERQQTPEVVPDDSGTFYDQSVSNDLEEH 185
Query: 182 LDNG---PEVCDPS---DKEEGSVVEDEIVEP------PSNSVQNEVHASVDSAPVAQGD 229
L+ PE DP ++E S +++E EP P ++ ++ A D A Q D
Sbjct: 186 LEEPVAEPEP-DPEPEPEQEPVSEIQEEKSEPVLEETAPEDTQKSSSPAPTDIAQTVQED 244
Query: 230 APEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDG 289
S+AS+ N+ + VP PP+ + + +P PE S +
Sbjct: 245 L-RTFSWASVTSK----NLPPSGAVPVTGI---PPHVVKVPASQPRPESKPE-SQIPPQR 295
Query: 290 APENSNVNEE 299
+ V E+
Sbjct: 296 PQRDQRVREQ 305
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 60/239 (25%), Positives = 93/239 (38%)
Query: 152 PTANVTEAPEPAHDQDHIPADRAIVIEGEDLDNGPEVCDPSDKEEGSV-VEDEIVEPPSN 210
P A PEP +Q+ P I+ E + E P D ++ S +I +
Sbjct: 189 PVAEPEPDPEPEPEQE--PVSE---IQEEKSEPVLEETAPEDTQKSSSPAPTDIAQTVQE 243
Query: 211 SVQNEVHASVDSAPVA-QGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNADQQ 269
++ ASV S + G P +VKV + P + P P DQ+
Sbjct: 244 DLRTFSWASVTSKNLPPSGAVPVTGIPPHVVKVPASQPRPESK--PESQIPPQRPQRDQR 301
Query: 270 S-------PAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEA 322
P P P+ EA G E + + +++ NL +EL++
Sbjct: 302 VREQRINIPPQRGPRPIREAG---EQGDVEPRRIVRHPDSHQLFIGNLPHEVDKSELKDF 358
Query: 323 FKIFGPIKKNGVQVRSNKQGYC--FGFVAFETPGSVQSALEASPILI-GDRPADVEAKR 378
F+ +G N V++R N G FGFV F+ VQ L PI+ G+ +VE K+
Sbjct: 359 FQSYG----NVVELRINSGGKLPNFGFVVFDDSEPVQKVLSNRPIMFRGEVRLNVEEKK 413
>UNIPROTKB|D6RAC7 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30291 EMBL:AC104828
IPI:IPI00966108 ProteinModelPortal:D6RAC7 SMR:D6RAC7
Ensembl:ENST00000507745 HOGENOM:HOG000138029 ArrayExpress:D6RAC7
Bgee:D6RAC7 Uniprot:D6RAC7
Length = 141
Score = 205 (77.2 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 47/128 (36%), Positives = 75/128 (58%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP+ ++
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 125
Query: 125 VLNDVFRF 132
V ND+FR+
Sbjct: 126 VHNDMFRY 133
>UNIPROTKB|D6RB17 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0006810 "transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0005737 GO:GO:0006810
InterPro:IPR018222 PROSITE:PS50177 HOGENOM:HOG000220838
HGNC:HGNC:30291 EMBL:AC104828 IPI:IPI00966366
ProteinModelPortal:D6RB17 SMR:D6RB17 Ensembl:ENST00000503660
ArrayExpress:D6RB17 Bgee:D6RB17 Uniprot:D6RB17
Length = 198
Score = 205 (77.2 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 47/128 (36%), Positives = 75/128 (58%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP+ ++
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 125
Query: 125 VLNDVFRF 132
V ND+FR+
Sbjct: 126 VHNDMFRY 133
>ZFIN|ZDB-GENE-070112-1972 [details] [associations]
symbol:g3bp2 "GTPase activating protein (SH3
domain) binding protein 2" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-070112-1972
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 eggNOG:NOG324333
GeneTree:ENSGT00390000011365 HOGENOM:HOG000220838
HOVERGEN:HBG007211 OrthoDB:EOG4XWFZ0 CTD:9908 EMBL:CU570873
EMBL:BC129213 IPI:IPI00487372 RefSeq:NP_001074032.1 UniGene:Dr.6807
Ensembl:ENSDART00000046376 GeneID:556409 KEGG:dre:556409
InParanoid:A1L1U3 OMA:NDIFRYV NextBio:20881470 Uniprot:A1L1U3
Length = 507
Score = 224 (83.9 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 79/287 (27%), Positives = 131/287 (45%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMTTVTTMKA-INDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D NG ++ +A I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPDFLHRFYGRNSSYVHGGLDLNGKLSEAVYGQAEIHKKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
+SL + + +I+ DA + GV+V V G L+ +KF QTF LAP+ ++
Sbjct: 66 MSLQFSECHTKIRHVDAHATLSDGVVVQVMGELSNNGQPMRKFLQTFVLAPEGSVANKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXX--TAPTANVTEAPEPAHD--------QDH-IPADR 173
V ND+FR+ T + +PEP D + H + +
Sbjct: 126 VHNDIFRYEDEVFGDSEAELDEESEEETDEPEDRQPSPEPLQDSPSNANCYEPHPVSCNN 185
Query: 174 AIVIEGED--LDNGPEVC-DPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDA 230
+ E+ +D EV DP +E VE++ VE + V ++S P Q +
Sbjct: 186 GVEEAHEEAVMDLQSEVAPDPKIEESKLKVEEKDVEEFEEKALSPV--PLESPPNIQ-EP 242
Query: 231 PEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAM-AKP 276
P+ S+AS+ N+ + VP+ +P A P + KP
Sbjct: 243 PKTSSWASVTSK----NLPLSGTVPSAGGQPHVVKAPNTQPRVETKP 285
>UNIPROTKB|Q5ZMN1 [details] [associations]
symbol:G3BP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0000166 GO:GO:0006810
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR018222 PROSITE:PS50177
CTD:10146 eggNOG:NOG324333 GeneTree:ENSGT00390000011365
HOGENOM:HOG000220838 HOVERGEN:HBG007211 OrthoDB:EOG4XWFZ0
EMBL:AADN02028650 EMBL:AADN02028651 EMBL:AADN02028652 EMBL:AJ719353
IPI:IPI00593144 RefSeq:NP_001006150.1 UniGene:Gga.4912
STRING:Q5ZMN1 Ensembl:ENSGALT00000006615 GeneID:416265
KEGG:gga:416265 InParanoid:Q5ZMN1 OMA:RNDGGEN NextBio:20819751
Uniprot:Q5ZMN1
Length = 472
Score = 223 (83.6 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 71/232 (30%), Positives = 106/232 (45%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L+Q+P +HRFY ++SS + DSNG V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDSNGKPADAVYGQSDIHKKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN++D +I+ DA + GV+V V G L+ ++F QTF LAP+ ++
Sbjct: 66 LSLNFKDCHTKIRHVDAHATLNDGVVVQVMGELSNNMQPVRRFMQTFVLAPEGSVANKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTEAPEPAHDQ---DHIPADRAIVIEGED 181
V ND+FR+ P + E EP Q + +P D E
Sbjct: 126 VHNDIFRYQDEVFGDSDTE-------PPEESEEEGEEPEERQQTPEAVPDDTGAYYEQTV 178
Query: 182 LDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEK 233
++ E + + E E E + P Q E S PV + APE+
Sbjct: 179 SNDIEEHLEETTAEAEPEPEPEPEQEPEPEAQEE-----KSEPVLEESAPEE 225
Score = 116 (45.9 bits), Expect = 0.00080, P = 0.00080
Identities = 66/246 (26%), Positives = 97/246 (39%)
Query: 153 TANVTEAPEPAHDQDHIPADRAIVIEGEDLDNGPEVCDPSDKEEGSVVEDEIVEP--PSN 210
TA PEP +Q+ P E ++ + P V + S EE +V + P P+
Sbjct: 190 TAEAEPEPEPEPEQEPEP-------EAQEEKSEP-VLEESAPEE-TVEKSPSPAPADPAP 240
Query: 211 SVQNEVH----ASVDSAPVA-QGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPN 265
+VQ + ASV S + G P +VKV A P + P P
Sbjct: 241 AVQEDSRTFSWASVTSKNLPPSGAVPVSGIPPHVVKVPVSQPRPEAK--PESQTPPQRPQ 298
Query: 266 ADQQS-------PAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTE 318
DQ+ P P P+ E G E + + ++V NL +E
Sbjct: 299 RDQRVREQRTSIPPQRGPRPIREGE----QGDVETRRIVRYPDSHQLFVGNLPHDVDKSE 354
Query: 319 LEEAFKIFGPIKK---NGVQVRSNKQGYC--FGFVAFETPGSVQSALEASPILI-GDRPA 372
L++ F+ G N V++R N G FGFV F+ P VQ L PI+ G+
Sbjct: 355 LKDFFQKLGSSLAGYGNVVELRINSGGKLPNFGFVVFDDPDPVQKILSNRPIMFRGEVRL 414
Query: 373 DVEAKR 378
+VE K+
Sbjct: 415 NVEEKK 420
>UNIPROTKB|F1LVS8 [details] [associations]
symbol:F1LVS8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 IPI:IPI00561182
Ensembl:ENSRNOT00000002166 Uniprot:F1LVS8
Length = 439
Score = 219 (82.2 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 93/379 (24%), Positives = 158/379 (41%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRF+ ++SS + D++G V I+ ++
Sbjct: 10 PSPLLVGREFVRQYYTLLNRAPEYLHRFFGRNSSYVHGGVDASGKPQEAVYGQNDIHYKM 69
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN+ + +I DA + GV+V V G L+ ++KF QTF LAP+ ++
Sbjct: 70 LSLNFSECHTKICHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 129
Query: 125 VLNDVFRFXXXXXXXXX----XXXXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIEGE 180
V ND+FR+ P+ V E A+ H P I E
Sbjct: 130 VHNDMFRYEDEVFGDSEPELDEVEEEQENRQPSPEVQENANSAYYDAH-PETNGIEEPLE 188
Query: 181 DLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIV 240
+ + PE S+K E ++ + E ++ + + P + P K
Sbjct: 189 ESSHEPEPEPESEKTEE--LKPQAEEKHLEELEEKSATPPPADPASLPQEPPKP------ 240
Query: 241 KVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAPENSNVNEEA 300
+V + S A P + +P P P +P +D +N +
Sbjct: 241 RVDAKPEVQSQA--PRIREQPGFP------PRGPRPG---RGDTEQNDS--DNRRIIRYP 287
Query: 301 EGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRS-NKQGYCFGFVAFETPGSVQSA 359
+ ++V NL EL+E F FG + + + + + FGFV F+ +Q
Sbjct: 288 DSHQLFVGNLPHDIDENELKEFFMHFGNVVELHINTKGVGGKLPNFGFVVFDDSEPLQRI 347
Query: 360 LEASPILIGDRPADVEAKR 378
L + + G+ +VE K+
Sbjct: 348 LIENQLCFGEVHLNVEKKK 366
>UNIPROTKB|E5RJU8 [details] [associations]
symbol:G3BP1 "Ras GTPase-activating protein-binding protein
1" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30292 ChiTaRS:G3BP1
EMBL:AC091982 IPI:IPI00973731 ProteinModelPortal:E5RJU8 SMR:E5RJU8
Ensembl:ENST00000522761 UCSC:uc010jhy.1 ArrayExpress:E5RJU8
Bgee:E5RJU8 Uniprot:E5RJU8
Length = 153
Score = 196 (74.1 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 45/124 (36%), Positives = 71/124 (57%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L+Q+P ++HRFY ++SS + DSNG V K I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVL 126
+S N+ + +I+ DA + GV+V V G L+ + ++F QTF LAP+ F+
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEVHLALFLA 125
Query: 127 NDVF 130
+F
Sbjct: 126 QSLF 129
>UNIPROTKB|E5RH42 [details] [associations]
symbol:G3BP1 "Ras GTPase-activating protein-binding protein
1" species:9606 "Homo sapiens" [GO:0006810 "transport"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30292
ChiTaRS:G3BP1 EMBL:AC091982 IPI:IPI00979451
ProteinModelPortal:E5RH42 SMR:E5RH42 Ensembl:ENST00000520578
ArrayExpress:E5RH42 Bgee:E5RH42 Uniprot:E5RH42
Length = 117
Score = 192 (72.6 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 43/112 (38%), Positives = 67/112 (59%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L+Q+P ++HRFY ++SS + DSNG V K I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQ 118
+S N+ + +I+ DA + GV+V V G L+ + ++F QTF LAP+
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPE 117
>UNIPROTKB|Q5HYE9 [details] [associations]
symbol:DKFZp313K0921 "Putative uncharacterized protein
DKFZp313K0921" species:9606 "Homo sapiens" [GO:0005622
"intracellular" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 CTD:10146 RefSeq:NP_005745.1
RefSeq:NP_938405.1 UniGene:Hs.587054 DNASU:10146 GeneID:10146
KEGG:hsa:10146 HGNC:HGNC:30292 PharmGKB:PA162389105
GenomeRNAi:10146 NextBio:38391 HOGENOM:HOG000138029 EMBL:AC091982
EMBL:AK300098 EMBL:BX647869 IPI:IPI00982147 SMR:Q5HYE9
STRING:Q5HYE9 Ensembl:ENST00000520177 Ensembl:ENST00000522367
HOVERGEN:HBG055943 Uniprot:Q5HYE9
Length = 122
Score = 192 (72.6 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 43/112 (38%), Positives = 67/112 (59%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L+Q+P ++HRFY ++SS + DSNG V K I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQ 118
+S N+ + +I+ DA + GV+V V G L+ + ++F QTF LAP+
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPE 117
>UNIPROTKB|E5RIZ6 [details] [associations]
symbol:G3BP1 "Ras GTPase-activating protein-binding protein
1" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30292 ChiTaRS:G3BP1
EMBL:AC091982 IPI:IPI00974560 ProteinModelPortal:E5RIZ6 SMR:E5RIZ6
Ensembl:ENST00000507878 ArrayExpress:E5RIZ6 Bgee:E5RIZ6
Uniprot:E5RIZ6
Length = 148
Score = 187 (70.9 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 48/138 (34%), Positives = 76/138 (55%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVH----------RFY-QDSSLLSRP-DSNGSMT-TV 56
PS +VG FV QYY +L+Q+P ++H RFY ++SS + DSNG V
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDMLHSLHIGYHMIIRFYGKNSSYVHGGLDSNGKPADAV 65
Query: 57 TTMKAINDRILSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLA 116
K I+ +++S N+ + +I+ DA + GV+V V G L+ + ++F QTF LA
Sbjct: 66 YGQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLA 125
Query: 117 PQDK--GGYFVLNDVFRF 132
P+ ++V ND+FR+
Sbjct: 126 PEGSVANKFYVHNDIFRY 143
>UNIPROTKB|D6RGJ4 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30291 EMBL:AC104828
HOGENOM:HOG000138029 IPI:IPI00965049 ProteinModelPortal:D6RGJ4
SMR:D6RGJ4 Ensembl:ENST00000509100 ArrayExpress:D6RGJ4 Bgee:D6RGJ4
Uniprot:D6RGJ4
Length = 125
Score = 185 (70.2 bits), Expect = 7.3e-14, P = 7.3e-14
Identities = 42/112 (37%), Positives = 66/112 (58%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQ 118
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP+
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPE 117
>UNIPROTKB|D6RBW8 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30291 EMBL:AC104828
HOGENOM:HOG000138029 IPI:IPI00966981 ProteinModelPortal:D6RBW8
SMR:D6RBW8 Ensembl:ENST00000511146 ArrayExpress:D6RBW8 Bgee:D6RBW8
Uniprot:D6RBW8
Length = 116
Score = 183 (69.5 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 42/111 (37%), Positives = 65/111 (58%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAP 117
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAP 116
>UNIPROTKB|F1M2M6 [details] [associations]
symbol:F1M2M6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] InterPro:IPR002075
Pfam:PF02136 GO:GO:0005737 GO:GO:0006810 InterPro:IPR018222
PROSITE:PS50177 GeneTree:ENSGT00390000011365 IPI:IPI00563721
Ensembl:ENSRNOT00000048672 OMA:QSHTISS Uniprot:F1M2M6
Length = 403
Score = 178 (67.7 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 73/283 (25%), Positives = 115/283 (40%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRP--DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L++ P ++HRFY S + DSNG V K I+ ++
Sbjct: 8 PSPLLVGREFVRQYYTLLNRVPDMLHRFYVKKSSYAHGGLDSNGKPADAVYGQKEIHRKV 67
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGG--YF 124
+ N+ + +I DA + V+V V G L+ + +F QTF LAP+ ++
Sbjct: 68 MLQNFTNCHTKIHHVDAYATQNDRVVVQVMGLLSNNNQALWRFMQTFVLAPEGSTANKFY 127
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIEGEDLDN 184
V D+FR + E PE + +D + DL+
Sbjct: 128 VHKDIFRHQDEVFGGFVTEPQEE-----SEEEVEEPEERQQSPEVVSDDYQTVSN-DLEE 181
Query: 185 GPE--VCDPSDKEEGSVVEDEIVEPPSNSVQN---EVHASVDSAPVAQGDAPEKKSYASI 239
E V +P + E +E E EP S + ++ +V S P A E S
Sbjct: 182 HLEEPVVEPPEPE----LEPEW-EPVSYTQEDKPEDVQKSTSRVPADVASAQEDLRTFSW 236
Query: 240 VKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEA 282
V N+ + VP TPP+ + + P P++
Sbjct: 237 ASVTSK-NLPPSGAVPVTG---TPPHMVKVPASQPHPESKPDS 275
Score = 64 (27.6 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 30/117 (25%), Positives = 41/117 (35%)
Query: 255 PARKARPTPPNADQQS---PAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLA 311
P + P P DQQ P +P P+ EA G E + + +++ NL
Sbjct: 273 PDSQIPPQRPQRDQQRINIPPQRRPRPIREAG---EPGDVEPRRMVRHPDSHQLFIGNLP 329
Query: 312 FTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYCFGFVAFETPGSVQSALEASPILIG 368
+EL +IF IK G V F+ VQ L PI G
Sbjct: 330 HEVDKSEL----RIFSKIKGMWWSCALTVVGSYPISVLFDDSEPVQKVLHNRPITFG 382
>TAIR|locus:2099926 [details] [associations]
symbol:AT3G55540 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006606 "protein import into nucleus"
evidence=ISS] [GO:0006810 "transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=ISS] InterPro:IPR002075
Pfam:PF02136 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006810
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 EMBL:AL132975
IPI:IPI00537140 PIR:T47693 RefSeq:NP_191113.1 UniGene:At.53937
ProteinModelPortal:Q9M2S5 SMR:Q9M2S5 PaxDb:Q9M2S5 PRIDE:Q9M2S5
EnsemblPlants:AT3G55540.1 GeneID:824719 KEGG:ath:AT3G55540
TAIR:At3g55540 eggNOG:NOG258130 HOGENOM:HOG000153240
InParanoid:Q9M2S5 OMA:EALANCF PhylomeDB:Q9M2S5
ProtClustDB:CLSN2915780 Genevestigator:Q9M2S5 Uniprot:Q9M2S5
Length = 334
Score = 190 (71.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 41/127 (32%), Positives = 77/127 (60%)
Query: 11 SAQVVGNAFVEQYYHILHQSPGLVHR-FYQDSSLLSRPDSNGSMTTVTTMKAINDRILSL 69
+++ + N F++ Y+ L P +V +Y D S+++RP +G+M + T+ +AI ++I+S
Sbjct: 28 TSEALANCFLQSYFLNLGVYPEVVQMMWYADDSVMTRPGPDGTMMSFTSPEAIQEQIVSC 87
Query: 70 NYEDYTAEIKTADAQD---SYEKGVIVLVTGCLTGKDN-VKKKFTQTFFLAPQDKGGYFV 125
+YE + ++ + AQ S E G ++VTG LT KD V+++F Q+ +LA + Y +
Sbjct: 88 DYEGASFDVMSFAAQSCNTSSEDGAFIMVTGFLTCKDKQVRRRFVQSLYLARRQDRSYAI 147
Query: 126 LNDVFRF 132
+ND R+
Sbjct: 148 VNDFLRY 154
Score = 131 (51.2 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 34/119 (28%), Positives = 61/119 (51%)
Query: 19 FVEQYYHI-LHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTT--MKAINDRILSLNYEDYT 75
FV+ YY + + + GL+ Y + S++SRP S T V + AIN R+ + +
Sbjct: 170 FVKVYYELPMREELGLM---YVNESIMSRPTSTSGRTMVEMPGLDAINKRVSNEHKRASN 226
Query: 76 AEIKTADAQ--DSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDVFRF 132
+ + D Q S++ + ++V G +T D ++KF Q F++ G Y + ND+ R+
Sbjct: 227 FILNSVDYQISRSFKDRMFIMVCGFVTLDDKTERKFLQFFYVTRCHNGSYVIYNDILRY 285
>UNIPROTKB|D6RE13 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30291 EMBL:AC104828
HOGENOM:HOG000138029 IPI:IPI00966712 ProteinModelPortal:D6RE13
SMR:D6RE13 Ensembl:ENST00000515457 ArrayExpress:D6RE13 Bgee:D6RE13
Uniprot:D6RE13
Length = 111
Score = 163 (62.4 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 38/106 (35%), Positives = 61/106 (57%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQT 112
LSLN+ + +I+ DA + GV+V V G L+ ++KF QT
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQT 111
>ASPGD|ASPL0000071333 [details] [associations]
symbol:ntfA species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0008536 "Ran GTPase binding" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0005737 GO:GO:0015031
EMBL:BN001303 EMBL:AACD01000084 InterPro:IPR018222 PROSITE:PS50177
eggNOG:NOG286483 HOGENOM:HOG000197024 OMA:MTFEGVQ EMBL:AY038983
RefSeq:XP_662546.1 ProteinModelPortal:Q96VN3 SMR:Q96VN3
STRING:Q96VN3 EnsemblFungi:CADANIAT00005455 GeneID:2872742
KEGG:ani:AN4942.2 OrthoDB:EOG4HHSBX Uniprot:Q96VN3
Length = 125
Score = 159 (61.0 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 42/121 (34%), Positives = 62/121 (51%)
Query: 13 QVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSLNYE 72
Q + FV YY + + Y+D S+L+ S + + I +++ SL ++
Sbjct: 5 QSIAQQFVTFYYQTFDGNRAGLAPLYRDHSMLTFETS-----AIQGVAGIIEKLTSLPFQ 59
Query: 73 DYTAEIKTADAQDSYEKG-VIVLVTGCL-TGKDNVKKKFTQTFFLAPQDKGGYFVLNDVF 130
++ T DAQ S E G ++VLVTG L ++ +TQTF L P G YFVLNDVF
Sbjct: 60 KVQHQVSTLDAQPSGEHGGILVLVTGALLVDEEKNPMNYTQTFQLMPDGAGSYFVLNDVF 119
Query: 131 R 131
R
Sbjct: 120 R 120
>UNIPROTKB|E5RI46 [details] [associations]
symbol:G3BP1 "Ras GTPase-activating protein-binding protein
1" species:9606 "Homo sapiens" [GO:0006810 "transport"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30292
ChiTaRS:G3BP1 EMBL:AC091982 IPI:IPI00982785
ProteinModelPortal:E5RI46 SMR:E5RI46 Ensembl:ENST00000520006
ArrayExpress:E5RI46 Bgee:E5RI46 Uniprot:E5RI46
Length = 105
Score = 153 (58.9 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 36/97 (37%), Positives = 57/97 (58%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L+Q+P ++HRFY ++SS + DSNG V K I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKD 103
+S N+ + +I+ DA + GV+V V G L+ +
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNN 102
>UNIPROTKB|E5RIF8 [details] [associations]
symbol:G3BP1 "Ras GTPase-activating protein-binding protein
1" species:9606 "Homo sapiens" [GO:0006810 "transport"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30292
ChiTaRS:G3BP1 EMBL:AC091982 IPI:IPI00982712
ProteinModelPortal:E5RIF8 SMR:E5RIF8 Ensembl:ENST00000523519
ArrayExpress:E5RIF8 Bgee:E5RIF8 Uniprot:E5RIF8
Length = 106
Score = 153 (58.9 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 36/97 (37%), Positives = 57/97 (58%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L+Q+P ++HRFY ++SS + DSNG V K I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKD 103
+S N+ + +I+ DA + GV+V V G L+ +
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNN 102
>MGI|MGI:1926034 [details] [associations]
symbol:Celf3 "CUGBP, Elav-like family member 3"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008380 "RNA
splicing" evidence=ISO] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1926034 GO:GO:0005634
GO:GO:0005737 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 GO:GO:0030317
HSSP:Q92879 HOVERGEN:HBG107646 KO:K13207 GO:GO:0048026
eggNOG:NOG251494 HOGENOM:HOG000004754 GeneTree:ENSGT00560000076837
CTD:11189 OMA:HSAYLNP GO:GO:0000381 OrthoDB:EOG4RJG30 EMBL:AY165052
EMBL:BC057553 IPI:IPI00461847 IPI:IPI00854025 RefSeq:NP_766022.1
UniGene:Mm.44292 ProteinModelPortal:Q8CIN6 SMR:Q8CIN6 STRING:Q8CIN6
PhosphoSite:Q8CIN6 PaxDb:Q8CIN6 PRIDE:Q8CIN6
Ensembl:ENSMUST00000029784 GeneID:78784 KEGG:mmu:78784
UCSC:uc008qgl.1 UCSC:uc008qgm.1 InParanoid:Q8CIN6 NextBio:349492
Bgee:Q8CIN6 CleanEx:MM_TNRC4 Genevestigator:Q8CIN6 Uniprot:Q8CIN6
Length = 465
Score = 171 (65.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 53/173 (30%), Positives = 78/173 (45%)
Query: 208 PSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNAD 267
P N VH +P A D P +++YA + Y AAY A P PP
Sbjct: 294 PDALYPNGVHPYPAQSPAAPVD-PLQQAYAGMQHYTAAY---PAAYSLVAPAFPQPPALV 349
Query: 268 QQSPAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFG 327
Q P P P P+ + E +GC+I++ +L T +E+ + F FG
Sbjct: 350 AQQP----PPP-PQQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFG 404
Query: 328 PIKKNGVQV-RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
+ V V R+ Q CFGFV+F+ P S Q+A++A + IG + V+ KR
Sbjct: 405 HVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 457
Score = 37 (18.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 77 EIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKF 109
++K AD++ ++ + V + G ++V+K F
Sbjct: 82 QVKPADSESRGDRKLFVGMLGKQQTDEDVRKMF 114
>UNIPROTKB|F1ST15 [details] [associations]
symbol:CELF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048026 "positive regulation of mRNA splicing, via
spliceosome" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0008380 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0007283 GO:GO:0003723 GO:GO:0030317 GO:GO:0048026
GeneTree:ENSGT00560000076837 OMA:HSAYLNP GO:GO:0000381
EMBL:CU457723 Ensembl:ENSSSCT00000007252 Uniprot:F1ST15
Length = 465
Score = 167 (63.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 54/173 (31%), Positives = 81/173 (46%)
Query: 208 PSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNAD 267
P N VH +P A D P +++YA M+ Y +AAY PA + P A
Sbjct: 296 PDALYPNGVHPYPAQSPAAPVD-PLQQAYAG----MQHY---TAAY-PAAYSLVAP--AF 344
Query: 268 QQSPAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFG 327
Q PA+ P P + E +GC+I++ +L T +E+ + F FG
Sbjct: 345 PQPPALVAQQPPPPPQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFG 404
Query: 328 PIKKNGVQV-RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
+ V V R+ Q CFGFV+F+ P S Q+A++A + IG + V+ KR
Sbjct: 405 HVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 457
>DICTYBASE|DDB_G0277957 [details] [associations]
symbol:DDB_G0277957 "nuclear transport factor 2
(NTF2) domain-containing protein" species:44689 "Dictyostelium
discoideum" [GO:0006810 "transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
dictyBase:DDB_G0277957 GO:GO:0000166 GO:GO:0006810
EMBL:AAFI02000023 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 eggNOG:NOG324333
RefSeq:XP_642031.1 ProteinModelPortal:Q54Z21
EnsemblProtists:DDB0304427 GeneID:8621242 KEGG:ddi:DDB_G0277957
InParanoid:Q54Z21 OMA:STSANVV Uniprot:Q54Z21
Length = 516
Score = 122 (48.0 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 33/120 (27%), Positives = 64/120 (53%)
Query: 15 VGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSLNYEDY 74
V +F+ +Y+ +L ++P + FY +S ++R NG +T+ IN+ +++ N +
Sbjct: 7 VAASFLLKYFTLLIKTPENLKDFYHQNSKITRRFENGKANILTSYDNINEFLVN-NSAKF 65
Query: 75 --TAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDVFRF 132
A I + D Q E + + G + G D ++F Q+F+L + +G +F+ ND+F F
Sbjct: 66 GGNANISSIDCQPLGES-IFMTCIGSI-GFDGNVRRFLQSFYLE-KIQGSFFISNDIFAF 122
Score = 91 (37.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 37/178 (20%), Positives = 77/178 (43%)
Query: 191 PSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAP-EKKSYASIVKVMKGYNIS 249
P+ E +V + EP +N+ N + P AP +K+++A +V + +
Sbjct: 231 PTPTETKAVETTKKPEPTTNTTTNTTTPA--EKPKETTPAPHQKQTWAQLVLINSTAQTA 288
Query: 250 SAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAPENSNVNEEAE-------G 302
SA+ P + + + + + + +++ + N++ + G
Sbjct: 289 SASEEPTQSSSSSSSQPSSSPSSSSSSVNNNSNTTTTTNNTTTTTTANKQKDDHHFSKDG 348
Query: 303 CSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYCFGFVAFETPGSVQSAL 360
++++ + ++EAF FG + + V++ + GY GFV FE P SVQ+AL
Sbjct: 349 NTVFISFKSSKVDQAPIKEAFNQFGVV--SNVRILT---GY--GFVEFEKPESVQNAL 399
>UNIPROTKB|Q5SZQ8 [details] [associations]
symbol:CELF3 "CUGBP Elav-like family member 3" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030317 "sperm
motility" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0003723 "RNA binding"
evidence=IMP] [GO:0008380 "RNA splicing" evidence=IMP] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0048026
"positive regulation of mRNA splicing, via spliceosome"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0007283
GO:GO:0030317 GO:GO:0000398 HOVERGEN:HBG107646 KO:K13207
GO:GO:0048026 eggNOG:NOG251494 CTD:11189 GO:GO:0000381
OrthoDB:EOG4RJG30 EMBL:AF329264 EMBL:AY165003 EMBL:AL589765
EMBL:BC052491 EMBL:BC068008 EMBL:BC104758 EMBL:BC143226 EMBL:U80746
EMBL:AF284423 IPI:IPI00852836 IPI:IPI00852895 IPI:IPI00852999
RefSeq:NP_009116.3 UniGene:Hs.26047 PDB:2DNO PDBsum:2DNO
ProteinModelPortal:Q5SZQ8 SMR:Q5SZQ8 IntAct:Q5SZQ8
MINT:MINT-4866187 STRING:Q5SZQ8 PhosphoSite:Q5SZQ8 DMDM:74756184
PRIDE:Q5SZQ8 Ensembl:ENST00000290583 GeneID:11189 KEGG:hsa:11189
UCSC:uc001eyr.3 UCSC:uc001eys.2 UCSC:uc009wmx.2
GeneCards:GC01M151674 HGNC:HGNC:11967 HPA:HPA006292 MIM:612678
neXtProt:NX_Q5SZQ8 PharmGKB:PA36654 PhylomeDB:Q5SZQ8
EvolutionaryTrace:Q5SZQ8 GenomeRNAi:11189 NextBio:42591
ArrayExpress:Q5SZQ8 Bgee:Q5SZQ8 CleanEx:HS_TNRC4
Genevestigator:Q5SZQ8 Uniprot:Q5SZQ8
Length = 465
Score = 165 (63.1 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 52/173 (30%), Positives = 76/173 (43%)
Query: 208 PSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNAD 267
P N VH +P A D P +++YA + Y AAY A P PP
Sbjct: 295 PDALYPNGVHPYPAQSPAAPVD-PLQQAYAGMQHYTAAY---PAAYSLVAPAFPQPPALV 350
Query: 268 QQSPAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFG 327
Q P P P + E +GC+I++ +L T +E+ + F FG
Sbjct: 351 AQQP------PPPPQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFG 404
Query: 328 PIKKNGVQV-RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
+ V V R+ Q CFGFV+F+ P S Q+A++A + IG + V+ KR
Sbjct: 405 HVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 457
>UNIPROTKB|D6RBR0 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30291 EMBL:AC104828
HOGENOM:HOG000138029 IPI:IPI00965308 ProteinModelPortal:D6RBR0
SMR:D6RBR0 Ensembl:ENST00000507252 ArrayExpress:D6RBR0 Bgee:D6RBR0
Uniprot:D6RBR0
Length = 102
Score = 143 (55.4 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 34/94 (36%), Positives = 55/94 (58%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLT 100
LSLN+ + +I+ DA + GV+V V G L+
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLS 99
>UNIPROTKB|D6REX8 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30291 EMBL:AC104828
IPI:IPI00964602 ProteinModelPortal:D6REX8 SMR:D6REX8
Ensembl:ENST00000511868 ArrayExpress:D6REX8 Bgee:D6REX8
Uniprot:D6REX8
Length = 99
Score = 143 (55.4 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 34/94 (36%), Positives = 55/94 (58%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLT 100
LSLN+ + +I+ DA + GV+V V G L+
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLS 99
>UNIPROTKB|Q08E07 [details] [associations]
symbol:CELF3 "CUGBP Elav-like family member 3" species:9913
"Bos taurus" [GO:0048026 "positive regulation of mRNA splicing, via
spliceosome" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0008380
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0007283
GO:GO:0003723 GO:GO:0030317 HOVERGEN:HBG107646 KO:K13207
GO:GO:0048026 eggNOG:NOG251494 HOGENOM:HOG000004754
GeneTree:ENSGT00560000076837 EMBL:BC123480 IPI:IPI00690976
RefSeq:NP_001070313.1 UniGene:Bt.18201 ProteinModelPortal:Q08E07
SMR:Q08E07 PRIDE:Q08E07 Ensembl:ENSBTAT00000033848 GeneID:513347
KEGG:bta:513347 CTD:11189 InParanoid:Q08E07 OMA:HSAYLNP
NextBio:20870823 ArrayExpress:Q08E07 GO:GO:0000381 Uniprot:Q08E07
Length = 461
Score = 164 (62.8 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 54/173 (31%), Positives = 79/173 (45%)
Query: 208 PSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNAD 267
P N VH +P A D P +++YA M+ Y AAY A P PP
Sbjct: 295 PDALYPNGVHPYPAQSPAAPVD-PLQQAYAG----MQHYTAYPAAYSLVAPAFPQPPALV 349
Query: 268 QQSPAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFG 327
Q P P P P+ + E +GC+I++ +L T +E+ + F FG
Sbjct: 350 AQQP----PPP-PQQQQQQQ----QQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFG 400
Query: 328 PIKKNGVQV-RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
+ V V R+ Q CFGFV+F+ P S Q+A++A + IG + V+ KR
Sbjct: 401 HVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 453
>RGD|1563168 [details] [associations]
symbol:Celf3 "CUGBP, Elav-like family member 3" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0030317
"sperm motility" evidence=ISO] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1563168 GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 GO:GO:0030317
GO:GO:0048026 GeneTree:ENSGT00560000076837 GO:GO:0000381
OrthoDB:EOG4RJG30 EMBL:AC133978 IPI:IPI00204869
ProteinModelPortal:D4A916 Ensembl:ENSRNOT00000028324
UCSC:RGD:1563168 Uniprot:D4A916
Length = 494
Score = 163 (62.4 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 50/165 (30%), Positives = 76/165 (46%)
Query: 216 VHASVDSAPVAQGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAK 275
V S +P A D P +++YA + Y AAY A P PP Q P
Sbjct: 331 VMLSAAQSPAAPVD-PLQQAYAGMQHYTAAY---PAAYSLVAPAFPQPPALVAQQP---- 382
Query: 276 PAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQ 335
P P P+ + + +GC+I++ +L T +E+ + F FG + V
Sbjct: 383 PPP-PQQQQQQQQQQQQQQQQQQRPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVF 441
Query: 336 V-RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
V R+ Q CFGFV+F+ P S Q+A++A + IG + V+ KR
Sbjct: 442 VDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 486
>DICTYBASE|DDB_G0276425 [details] [associations]
symbol:nutf2 "nuclear transport factor 2"
species:44689 "Dictyostelium discoideum" [GO:0006810 "transport"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0006606 "protein import into
nucleus" evidence=ISS] [GO:0005635 "nuclear envelope" evidence=ISS]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR002075 Pfam:PF02136
dictyBase:DDB_G0276425 GO:GO:0005737 GO:GO:0005635
GenomeReviews:CM000151_GR GO:GO:0006606 GO:GO:0008536
EMBL:AAFI02000015 InterPro:IPR018222 PROSITE:PS50177
eggNOG:NOG286483 OMA:MTFEGVQ RefSeq:XP_643125.1 HSSP:Q5CQI4
ProteinModelPortal:Q86HW7 IntAct:Q86HW7 STRING:Q86HW7
EnsemblProtists:DDB0233957 GeneID:8620530 KEGG:ddi:DDB_G0276425
Uniprot:Q86HW7
Length = 127
Score = 140 (54.3 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSL 69
P VG FVE YY I + + + YQ + L+ G ++ AI I+ L
Sbjct: 6 PQVVGVGKQFVEHYYGIFDSNRAGLTQIYQQQTTLTW---EGKF--LSGADAIVKHIVEL 60
Query: 70 NYEDYTAEIKTADAQDSYEKGVIVLVTGCLT--GKDNVKKKFTQTFFLAPQDKGGYFVLN 127
++ +I + D Q +Y+ G+++ VTG L G+ + KF Q F LA + G + ++N
Sbjct: 61 PFQQTNRKINSIDCQQTYQPGIMITVTGTLIIDGEAKNQLKFVQVFNLA-SNNGSFLLIN 119
Query: 128 DVFR 131
D FR
Sbjct: 120 DFFR 123
>UNIPROTKB|H0Y623 [details] [associations]
symbol:CELF3 "CUGBP Elav-like family member 3" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OMA:HSAYLNP
EMBL:AL589765 HGNC:HGNC:11967 ProteinModelPortal:H0Y623
PRIDE:H0Y623 Ensembl:ENST00000420342 Bgee:H0Y623 Uniprot:H0Y623
Length = 466
Score = 165 (63.1 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 52/173 (30%), Positives = 76/173 (43%)
Query: 208 PSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNAD 267
P N VH +P A D P +++YA + Y AAY A P PP
Sbjct: 296 PDALYPNGVHPYPAQSPAAPVD-PLQQAYAGMQHYTAAY---PAAYSLVAPAFPQPPALV 351
Query: 268 QQSPAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFG 327
Q P P P + E +GC+I++ +L T +E+ + F FG
Sbjct: 352 AQQP------PPPPQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFG 405
Query: 328 PIKKNGVQV-RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
+ V V R+ Q CFGFV+F+ P S Q+A++A + IG + V+ KR
Sbjct: 406 HVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 458
Score = 37 (18.1 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 77 EIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKF 109
++K AD++ ++ + V + G ++V+K F
Sbjct: 84 QVKPADSESRGDRKLFVGMLGKQQTDEDVRKMF 116
>POMBASE|SPAC15F9.03c [details] [associations]
symbol:nxt2 "nuclear transport factor Nxt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006606 "protein import
into nucleus" evidence=ISO] [GO:0008536 "Ran GTPase binding"
evidence=ISO] [GO:0031965 "nuclear membrane" evidence=ISO]
InterPro:IPR002075 Pfam:PF02136 PomBase:SPAC15F9.03c GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0031965 GO:GO:0006606
GO:GO:0008536 InterPro:IPR018222 PROSITE:PS50177 eggNOG:NOG286483
HOGENOM:HOG000197024 OMA:MTFEGVQ OrthoDB:EOG4HHSBX PIR:T38039
RefSeq:XP_001713065.1 ProteinModelPortal:Q10100 SMR:Q10100
STRING:Q10100 EnsemblFungi:SPAC15F9.03c.1 GeneID:2542783
KEGG:spo:SPAC15F9.03c NextBio:20803827 Uniprot:Q10100
Length = 123
Score = 139 (54.0 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 38/115 (33%), Positives = 62/115 (53%)
Query: 19 FVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSLNYEDYTAEI 78
F + YY + Y++ S+LS G+ T KAI ++++SL ++ I
Sbjct: 11 FTQFYYQTFDSDRSQLSSLYREESMLS---FEGAQLQGT--KAIVEKLVSLPFQRVQHRI 65
Query: 79 KTADAQDSYEKG-VIVLVTG-CLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDVFR 131
T DAQ + G VIV+VTG L ++ + ++++Q F L + G Y+VLND+FR
Sbjct: 66 STLDAQPTGTTGSVIVMVTGELLLDEEQMAQRYSQVFHLV-NNNGNYYVLNDLFR 119
>UNIPROTKB|E2RGA8 [details] [associations]
symbol:CELF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00560000076837 OMA:HSAYLNP EMBL:AAEX03011056
Ensembl:ENSCAFT00000020318 Uniprot:E2RGA8
Length = 539
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 53/173 (30%), Positives = 78/173 (45%)
Query: 208 PSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNAD 267
P N VH +P A D P +++YA + Y AAY A P PP
Sbjct: 372 PDALYPNGVHPYPAQSPAAPVD-PLQQAYAGMQHYTAAY---PAAYSLVAPAFPQPPALV 427
Query: 268 QQSPAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFG 327
Q P P P P+ + E +GC+I++ +L T +E+ + F FG
Sbjct: 428 AQQP----PPP-PQQQQQQQ----QQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFG 478
Query: 328 PIKKNGVQV-RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
+ V V R+ Q CFGFV+F+ P S Q+A++A + IG + V+ KR
Sbjct: 479 HVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 531
>GENEDB_PFALCIPARUM|PF14_0122 [details] [associations]
symbol:PF14_0122 "nuclear transport factor 2,
putative" species:5833 "Plasmodium falciparum" [GO:0006606 "protein
import into nucleus" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002075 Pfam:PF02136 GO:GO:0005622
GO:GO:0006606 EMBL:AE014187 InterPro:IPR018222 PROSITE:PS50177
HOGENOM:HOG000197024 RefSeq:XP_001348295.2
ProteinModelPortal:Q8ILX1 PRIDE:Q8ILX1
EnsemblProtists:PF14_0122:mRNA GeneID:811703 KEGG:pfa:PF14_0122
EuPathDB:PlasmoDB:PF3D7_1412300 ProtClustDB:CLSZ2431947
Uniprot:Q8ILX1
Length = 125
Score = 137 (53.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 34/123 (27%), Positives = 60/123 (48%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSL 69
P + +G FV Y+ + + + Y+D S++S + T+ I +R+ L
Sbjct: 6 PQFEEIGKEFVNHYFQLFNSGRNELAALYKDISMMSFENDQCRGTS-----QIIERLNKL 60
Query: 70 NYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDV 129
+ + D Q + G+++LV G + ++N KF ++F L P GGYF+ ND+
Sbjct: 61 P-PTVVHKCLSLDIQPTPNNGILILVCGDIIIEENKPLKFCRSFHLFPLPSGGYFIFNDL 119
Query: 130 FRF 132
FRF
Sbjct: 120 FRF 122
>UNIPROTKB|Q8ILX1 [details] [associations]
symbol:PF14_0122 "Nuclear transport factor 2, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0006606 "protein import into
nucleus" evidence=ISS] InterPro:IPR002075 Pfam:PF02136
GO:GO:0005622 GO:GO:0006606 EMBL:AE014187 InterPro:IPR018222
PROSITE:PS50177 HOGENOM:HOG000197024 RefSeq:XP_001348295.2
ProteinModelPortal:Q8ILX1 PRIDE:Q8ILX1
EnsemblProtists:PF14_0122:mRNA GeneID:811703 KEGG:pfa:PF14_0122
EuPathDB:PlasmoDB:PF3D7_1412300 ProtClustDB:CLSZ2431947
Uniprot:Q8ILX1
Length = 125
Score = 137 (53.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 34/123 (27%), Positives = 60/123 (48%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSL 69
P + +G FV Y+ + + + Y+D S++S + T+ I +R+ L
Sbjct: 6 PQFEEIGKEFVNHYFQLFNSGRNELAALYKDISMMSFENDQCRGTS-----QIIERLNKL 60
Query: 70 NYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDV 129
+ + D Q + G+++LV G + ++N KF ++F L P GGYF+ ND+
Sbjct: 61 P-PTVVHKCLSLDIQPTPNNGILILVCGDIIIEENKPLKFCRSFHLFPLPSGGYFIFNDL 119
Query: 130 FRF 132
FRF
Sbjct: 120 FRF 122
>FB|FBgn0031145 [details] [associations]
symbol:Ntf-2 "Nuclear transport factor-2" species:7227
"Drosophila melanogaster" [GO:0006606 "protein import into nucleus"
evidence=ISS;NAS] [GO:0008320 "protein transmembrane transporter
activity" evidence=ISS] [GO:0002807 "positive regulation of
antimicrobial peptide biosynthetic process" evidence=IMP]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR002075
Pfam:PF02136 GO:GO:0006810 EMBL:AE014298 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 GeneTree:ENSGT00510000047030
HSSP:P33331 UniGene:Dm.7205 GeneID:33078 KEGG:dme:Dmel_CG1740
CTD:33078 FlyBase:FBgn0031145 GenomeRNAi:33078 NextBio:781834
GO:GO:0002807 EMBL:AY094761 EMBL:AY531117 EMBL:AY673973
RefSeq:NP_608422.1 SMR:Q9VRD6 IntAct:Q9VRD6 MINT:MINT-949859
STRING:Q9VRD6 EnsemblMetazoa:FBtr0077241 EnsemblMetazoa:FBtr0333762
UCSC:CG1740-RA InParanoid:Q9VRD6 OMA:DAIMARF Uniprot:Q9VRD6
Length = 130
Score = 136 (52.9 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 38/124 (30%), Positives = 62/124 (50%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVH--RFYQDSSLLSRPDSNGSMTTVTTMKAINDRIL 67
P + +G FV+QYY I + FY S+ S G + I +++
Sbjct: 5 PQYEDIGKGFVQQYYAIFDDPANRANVVNFY--SATDSFMTFEGHQ--IQGAPKILEKVQ 60
Query: 68 SLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLN 127
SL+++ T I T D+Q +++ GV++ V G L D+ F+Q FFL + G +FV +
Sbjct: 61 SLSFQKITRVITTVDSQPTFDGGVLINVLGRLQCDDDPPHAFSQVFFLKA-NAGTFFVAH 119
Query: 128 DVFR 131
D+FR
Sbjct: 120 DIFR 123
>UNIPROTKB|Q5SZQ7 [details] [associations]
symbol:CELF3 "CUGBP Elav-like family member 3" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:CH471121
HOVERGEN:HBG107646 KO:K13207 HOGENOM:HOG000004754 CTD:11189
EMBL:AL589765 UniGene:Hs.26047 PDB:2DNO PDBsum:2DNO GeneID:11189
KEGG:hsa:11189 HGNC:HGNC:11967 PharmGKB:PA36654 GenomeRNAi:11189
NextBio:42591 IPI:IPI00386736 RefSeq:NP_001166120.1 SMR:Q5SZQ7
STRING:Q5SZQ7 Ensembl:ENST00000290585 UCSC:uc009wmy.3
EvolutionaryTrace:Q5SZQ7 Uniprot:Q5SZQ7
Length = 415
Score = 156 (60.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 49/169 (28%), Positives = 75/169 (44%)
Query: 212 VQNEVHASVDSAPVAQGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNADQQSP 271
+ + S +P A D P +++YA + Y AAY A P PP Q P
Sbjct: 249 IATPITPSSAQSPAAPVD-PLQQAYAGMQHYTAAY---PAAYSLVAPAFPQPPALVAQQP 304
Query: 272 AMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKK 331
P P + E +GC+I++ +L T +E+ + F FG +
Sbjct: 305 ------PPPPQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVIS 358
Query: 332 NGVQV-RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
V V R+ Q CFGFV+F+ P S Q+A++A + IG + V+ KR
Sbjct: 359 AKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 407
>TAIR|locus:2200066 [details] [associations]
symbol:NTL "NTF2-like" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006606 "protein import into nucleus" evidence=ISS] [GO:0006810
"transport" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=ISS] InterPro:IPR002075 Pfam:PF02136
EMBL:CP002684 GO:GO:0006810 GO:GO:0005622 InterPro:IPR018222
PROSITE:PS50177 IPI:IPI00938605 RefSeq:NP_001154326.1
UniGene:At.51573 ProteinModelPortal:F4I8X9 SMR:F4I8X9
EnsemblPlants:AT1G11570.2 GeneID:837700 KEGG:ath:AT1G11570
OMA:TEMERCH ArrayExpress:F4I8X9 Uniprot:F4I8X9
Length = 132
Score = 133 (51.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 39/123 (31%), Positives = 64/123 (52%)
Query: 15 VGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSLNYEDY 74
V +AFV YYH+ + Y +SLL+ G T+ + I++++ L ++
Sbjct: 12 VASAFVNHYYHLFDNDRSSLSSLYNPTSLLT---FEGQ--TIYGVDNISNKLKQLPFDQC 66
Query: 75 TAEIKTADAQDSYEKG----VIVLVTGC--LTGKDNVKKKFTQTFFLAPQDKGGYFVLND 128
I T D+Q S G ++V V+G L G+D+ +F+QTF L P +G +FV N+
Sbjct: 67 HHLISTVDSQPSSMAGGCGGILVFVSGSIQLHGEDH-PLRFSQTFHLIPVLQGSFFVQNE 125
Query: 129 VFR 131
+FR
Sbjct: 126 MFR 128
>UNIPROTKB|B4DQL3 [details] [associations]
symbol:CELF3 "CUGBP Elav-like family member 3" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOVERGEN:HBG107646
HOGENOM:HOG000004754 EMBL:AL589765 UniGene:Hs.26047 HGNC:HGNC:11967
EMBL:AK298852 IPI:IPI00909704 SMR:B4DQL3 STRING:B4DQL3
Ensembl:ENST00000392706 UCSC:uc010pdh.2 Uniprot:B4DQL3
Length = 260
Score = 147 (56.8 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 43/131 (32%), Positives = 65/131 (49%)
Query: 251 AAYVPARKARPTPPNADQQSPAM-AKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRN 309
AAY PA + P A Q PA+ A+ P P + E +GC+I++ +
Sbjct: 125 AAY-PAAYSLVAP--AFPQPPALVAQQPPPPPQQQQQQQQQQQQQQQREGPDGCNIFIYH 181
Query: 310 LAFTTTSTELEEAFKIFGPIKKNGVQV-RSNKQGYCFGFVAFETPGSVQSALEA-SPILI 367
L T +E+ + F FG + V V R+ Q CFGFV+F+ P S Q+A++A + I
Sbjct: 182 LPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQI 241
Query: 368 GDRPADVEAKR 378
G + V+ KR
Sbjct: 242 GMKRLKVQLKR 252
>FB|FBgn0032680 [details] [associations]
symbol:Ntf-2r "Nuclear transport factor-2-related"
species:7227 "Drosophila melanogaster" [GO:0006606 "protein import
into nucleus" evidence=ISS] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 eggNOG:NOG286483
HSSP:P33331 OrthoDB:EOG43BK59 EMBL:AY150767 EMBL:AY150768
FlyBase:FBgn0032680 InParanoid:Q8I078 Uniprot:Q8I078
Length = 130
Score = 128 (50.1 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 35/119 (29%), Positives = 56/119 (47%)
Query: 15 VGNAFVEQYYHILHQSPGL--VHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSLNYE 72
+G FV+QYY I V FY + + N + I +++ SL+++
Sbjct: 10 IGKEFVQQYYAIFDDPANRKNVINFYNATDSFMTFEGN----QIQGAPKILEKVQSLSFQ 65
Query: 73 DYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDVFR 131
I T D+Q + + GV+++V G L D+ F+Q F L P G FV +D+FR
Sbjct: 66 KIARVITTVDSQPTSDGGVLIIVLGRLKCDDDPPHAFSQIFLLKPNG-GSLFVAHDIFR 123
>TAIR|locus:2010509 [details] [associations]
symbol:NTF2B "AT1G27970" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006606 "protein import into nucleus" evidence=IGI;ISS]
[GO:0006810 "transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=ISS] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IGI] [GO:0008536 "Ran GTPase binding" evidence=IGI;IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0006820 "anion transport" evidence=RCA]
[GO:0006862 "nucleotide transport" evidence=RCA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=RCA] [GO:0006944
"cellular membrane fusion" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0015696
"ammonium transport" evidence=RCA] [GO:0015802 "basic amino acid
transport" evidence=RCA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] [GO:0043069 "negative regulation of programmed cell
death" evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043269 "regulation of ion transport" evidence=RCA]
InterPro:IPR002075 Pfam:PF02136 EMBL:CP002684 GO:GO:0005829
GO:GO:0005886 GO:GO:0005635 EMBL:AC069471 GO:GO:0006606
GO:GO:0008536 InterPro:IPR018222 PROSITE:PS50177
HOGENOM:HOG000197024 OMA:DAIMARF IPI:IPI00846718
RefSeq:NP_001077612.1 UniGene:At.40966 ProteinModelPortal:A8MS55
SMR:A8MS55 STRING:A8MS55 PRIDE:A8MS55 EnsemblPlants:AT1G27970.2
GeneID:839690 KEGG:ath:AT1G27970 ProtClustDB:CLSN2679350
Genevestigator:A8MS55 Uniprot:A8MS55
Length = 134
Score = 128 (50.1 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 37/119 (31%), Positives = 62/119 (52%)
Query: 15 VGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSLNYEDY 74
V AFVE YY + + YQ++S+L+ G + +++I ++ SL ++
Sbjct: 9 VSKAFVEHYYSTFDTNRVGLAGLYQEASMLT---FEGQK--IQGVQSIVAKLTSLPFQQC 63
Query: 75 TAEIKTADAQDSYE-KGVIVLVTGCL--TGKDNVKKKFTQTFFLAPQDKGGYFVLNDVF 130
I T D Q S G++V V+G L G+++ K F+Q F L P +G ++V ND+F
Sbjct: 64 KHHISTVDCQPSGPASGMLVFVSGNLQLAGEEHALK-FSQMFHLMPTPQGSFYVFNDIF 121
>SGD|S000000811 [details] [associations]
symbol:NTF2 "Nuclear envelope protein" species:4932
"Saccharomyces cerevisiae" [GO:0006913 "nucleocytoplasmic
transport" evidence=IMP] [GO:0006606 "protein import into nucleus"
evidence=IMP] [GO:0008536 "Ran GTPase binding" evidence=IPI]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0016021 "integral
to membrane" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 SGD:S000000811 GO:GO:0016021
GO:GO:0005737 GO:GO:0005635 EMBL:BK006939 GO:GO:0006606 EMBL:U18778
InterPro:IPR018222 PROSITE:PS50177 eggNOG:NOG286483
GeneTree:ENSGT00510000047030 HOGENOM:HOG000197024 OMA:MTFEGVQ
OrthoDB:EOG4HHSBX EMBL:AY558448 EMBL:L22204 PIR:S50467
RefSeq:NP_010925.1 PDB:1GY7 PDB:1GYB PDBsum:1GY7 PDBsum:1GYB
ProteinModelPortal:P33331 SMR:P33331 DIP:DIP-2245N IntAct:P33331
MINT:MINT-525215 STRING:P33331 PaxDb:P33331 PeptideAtlas:P33331
EnsemblFungi:YER009W GeneID:856727 KEGG:sce:YER009W CYGD:YER009w
EvolutionaryTrace:P33331 NextBio:982832 Genevestigator:P33331
GermOnline:YER009W Uniprot:P33331
Length = 125
Score = 125 (49.1 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 35 HRFYQDSSLLSRPDSNGSMTTVTTM-----KAINDRILSLNYEDYTAEIKTADAQDSYEK 89
++F D S L N SM T T K I ++++SL ++ I T DAQ +
Sbjct: 18 NQFDTDRSQLGNLYRNESMLTFETSQLQGAKDIVEKLVSLPFQKVQHRITTLDAQPASPN 77
Query: 90 G-VIVLVTG-CLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDVFR 131
G V+V++TG L ++ ++F+Q F L P D Y+V ND+FR
Sbjct: 78 GDVLVMITGDLLIDEEQNPQRFSQVFHLIP-DGNSYYVFNDIFR 120
>UNIPROTKB|Q91579 [details] [associations]
symbol:tnrc4-a "CUGBP Elav-like family member 3-A"
species:8355 "Xenopus laevis" [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:U16800 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 EMBL:BC057704 EMBL:BC072134
RefSeq:NP_001079936.1 UniGene:Xl.986 HSSP:Q92879
ProteinModelPortal:Q91579 SMR:Q91579 GeneID:379627 KEGG:xla:379627
CTD:379627 Xenbase:XB-GENE-6255196 HOVERGEN:HBG107646 KO:K13207
GO:GO:0048026 Uniprot:Q91579
Length = 462
Score = 147 (56.8 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 39/111 (35%), Positives = 59/111 (53%)
Query: 270 SPAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPI 329
SPA +P P A+ P+ E EGC+I++ +L T +E+ + F FG +
Sbjct: 350 SPAFTQP---P---AILQQQPPQQQQQREGPEGCNIFIYHLPQEFTDSEILQMFLPFGNV 403
Query: 330 KKNGVQV-RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
V V R+ Q CFGFV+F+ PGS Q+A++A + IG + V+ KR
Sbjct: 404 ISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQAMNGFQIGMKRLKVQLKR 454
>TAIR|locus:2015914 [details] [associations]
symbol:NTF2A "AT1G27310" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISM;IDA] [GO:0006606 "protein import into nucleus"
evidence=IGI;ISS;IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=ISS]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0006913
"nucleocytoplasmic transport" evidence=IGI] [GO:0008536 "Ran GTPase
binding" evidence=IGI;IPI] [GO:0006605 "protein targeting"
evidence=RCA] [GO:0006869 "lipid transport" evidence=RCA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA]
[GO:0010351 "lithium ion transport" evidence=RCA] [GO:0016558
"protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR002075 Pfam:PF02136 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005737 GO:GO:0005635 GO:GO:0006606
EMBL:AC004557 GO:GO:0008536 InterPro:IPR018222 PROSITE:PS50177
eggNOG:NOG286483 HOGENOM:HOG000197024 HSSP:P33331 OMA:CKHNITT
ProtClustDB:CLSN2679350 EMBL:AY042889 EMBL:AY072473 IPI:IPI00540337
PIR:H86398 RefSeq:NP_174051.1 UniGene:At.48239 UniGene:At.66864
ProteinModelPortal:Q9FZK4 SMR:Q9FZK4 STRING:Q9FZK4 PaxDb:Q9FZK4
PRIDE:Q9FZK4 EnsemblPlants:AT1G27310.1 GeneID:839620
KEGG:ath:AT1G27310 TAIR:At1g27310 InParanoid:Q9FZK4
PhylomeDB:Q9FZK4 Genevestigator:Q9FZK4 Uniprot:Q9FZK4
Length = 122
Score = 124 (48.7 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 42/123 (34%), Positives = 60/123 (48%)
Query: 15 VGNAFVEQYYHILHQS-PGLVHRFYQDSSLLSRPDSN--GSMTTVTTMKAINDRILSLNY 71
V AFVE YY + PGLV YQ+ S+L+ GS V ++ L +
Sbjct: 6 VAKAFVEHYYSTFDANRPGLVS-LYQEGSMLTFEGQKIQGSQNIVA-------KLTGLPF 57
Query: 72 EDYTAEIKTADAQDSYEKG-VIVLVTGCL--TGKDNVKKKFTQTFFLAPQDKGGYFVLND 128
+ I T D Q S G ++V V+G L G+ + K F+Q F L ++G Y+V ND
Sbjct: 58 QQCKHNITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALK-FSQMFHLI-SNQGNYYVFND 115
Query: 129 VFR 131
+FR
Sbjct: 116 IFR 118
>WB|WBGene00004305 [details] [associations]
symbol:ran-4 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0060465 "pharynx development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR002075
Pfam:PF02136 GO:GO:0009792 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0015031 GO:GO:0018996
GO:GO:0040011 GO:GO:0000003 GO:GO:0060465 InterPro:IPR018222
PROSITE:PS50177 EMBL:Z75546 eggNOG:NOG286483
GeneTree:ENSGT00510000047030 HOGENOM:HOG000197024 OMA:MTFEGVQ
PIR:T23921 RefSeq:NP_492322.1 ProteinModelPortal:Q21735 SMR:Q21735
IntAct:Q21735 STRING:Q21735 PaxDb:Q21735 EnsemblMetazoa:R05D11.3.1
EnsemblMetazoa:R05D11.3.2 GeneID:172648 KEGG:cel:CELE_R05D11.3
UCSC:R05D11.3.1 CTD:172648 WormBase:R05D11.3 InParanoid:Q21735
NextBio:876417 Uniprot:Q21735
Length = 133
Score = 123 (48.4 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 37/126 (29%), Positives = 56/126 (44%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRIL-- 67
P + V AF++ YY G+ Q S L P+ N MT D IL
Sbjct: 5 PDYESVAKAFIQHYYSKFDVGDGMSRA--QGLSDLYDPE-NSYMTFEGQQAKGRDGILQK 61
Query: 68 --SLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFV 125
+L + I D+Q Y+ + V+V G L ++ F+Q F L P ++G YF+
Sbjct: 62 FTTLGFTKIQRAITVIDSQPLYDGSIQVMVLGQLKTDEDPINPFSQVFILRPNNQGSYFI 121
Query: 126 LNDVFR 131
N++FR
Sbjct: 122 GNEIFR 127
>UNIPROTKB|Q7ZWM3 [details] [associations]
symbol:tnrc4-b "CUGBP Elav-like family member 3-B"
species:8355 "Xenopus laevis" [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 HSSP:Q92879 HOVERGEN:HBG107646
KO:K13207 GO:GO:0048026 EMBL:BC046942 RefSeq:NP_001080695.1
UniGene:Xl.12160 ProteinModelPortal:Q7ZWM3 SMR:Q7ZWM3 GeneID:380387
KEGG:xla:380387 CTD:380387 Xenbase:XB-GENE-5796640 Uniprot:Q7ZWM3
Length = 462
Score = 145 (56.1 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 38/111 (34%), Positives = 60/111 (54%)
Query: 270 SPAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPI 329
SPA +P P A+ + P+ E EGC+I++ +L T +E+ + F FG +
Sbjct: 350 SPAFTQP---P---AILTQQPPQQQQQREGPEGCNIFIYHLPQEFTDSEILQMFLPFGNV 403
Query: 330 KKNGVQV-RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
V V R+ Q CFGFV+F+ PGS Q+A+++ + IG + V+ KR
Sbjct: 404 ISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKR 454
>ZFIN|ZDB-GENE-000501-2 [details] [associations]
symbol:celf3a "cugbp, Elav-like family member 3a"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-000501-2 GO:GO:0005634 GO:GO:0005737
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
HSSP:Q92879 HOVERGEN:HBG107646 KO:K13207 GO:GO:0048026
eggNOG:NOG251494 HOGENOM:HOG000004754 GeneTree:ENSGT00560000076837
EMBL:AB032725 EMBL:BX248499 EMBL:BC060923 IPI:IPI00504951
RefSeq:NP_571569.2 UniGene:Dr.8323 ProteinModelPortal:Q9IBD1
SMR:Q9IBD1 Ensembl:ENSDART00000039629 GeneID:57922 KEGG:dre:57922
CTD:57922 OMA:MQHYTAT OrthoDB:EOG4RJG30 NextBio:20891938
Bgee:Q9IBD1 Uniprot:Q9IBD1
Length = 452
Score = 144 (55.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 50/178 (28%), Positives = 80/178 (44%)
Query: 207 PPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNA 266
PP +V + + V +AP G + + Y + V Y S A P ++A +
Sbjct: 274 PPPIAVNS--YPPVPAAP--NGQSASEALYTNGVHP---YQAQSPALDPLQQAYTGMQHY 326
Query: 267 DQQSPA----MAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEA 322
PA + +P P P+ E EGC+I++ +L T +E+ +
Sbjct: 327 TATYPAAYGLVGQPFPHQPTLVAQQPQQPQQLQQREGPEGCNIFIYHLPQEFTDSEMLQM 386
Query: 323 FKIFGPIKKNGVQV-RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
F FG + V V R+ Q CFGFV+F+ P S Q+A++A + IG + V+ KR
Sbjct: 387 FLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 444
>UNIPROTKB|E2RJG5 [details] [associations]
symbol:CELF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00560000076837 OMA:MQHVAAF EMBL:AAEX03016277
EMBL:AAEX03016278 Ensembl:ENSCAFT00000028069 Uniprot:E2RJG5
Length = 427
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 45/140 (32%), Positives = 65/140 (46%)
Query: 246 YNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAPENSNV-----NEEA 300
YN + Y PA+ P Q M A P A A S P+ S+ E
Sbjct: 282 YNNGLSPY-PAQSPGVADP-LQQAYAGMHHYAAYPSAYAPVSTAFPQQSSALPQQQREGP 339
Query: 301 EGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQV-RSNKQGYCFGFVAFETPGSVQSA 359
EGC++++ +L EL + F FG + V V R+ Q CFGFV+F+ P S Q+A
Sbjct: 340 EGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTA 399
Query: 360 LEA-SPILIGDRPADVEAKR 378
++A + IG + V+ KR
Sbjct: 400 IQAMNGFQIGMKRLKVQLKR 419
>UNIPROTKB|F1S8E8 [details] [associations]
symbol:CELF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00560000076837 OMA:DGMKDLD EMBL:FP016150
EMBL:FP565386 Ensembl:ENSSSCT00000014721 Uniprot:F1S8E8
Length = 420
Score = 136 (52.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 49/163 (30%), Positives = 73/163 (44%)
Query: 230 APEKKSYASIVKVMKGYNISSAAY----VPARKARPT------PP-NADQQSPAMAKPAP 278
AP +A +V G+ Y VP PT P + QQ AM A
Sbjct: 250 APITNGFAGVVPFPGGHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAA 309
Query: 279 V-PEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQV- 336
+ P A ++ E EGC++++ +L TEL + F FG I + V +
Sbjct: 310 ITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMD 369
Query: 337 RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
R+ Q CFGFV+F+ P S Q+A++A + IG + V+ KR
Sbjct: 370 RATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKR 412
>UNIPROTKB|K7EJD7 [details] [associations]
symbol:CELF4 "CUGBP Elav-like family member 4" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
Gene3D:3.30.70.330 HGNC:HGNC:14015 EMBL:AC015961 EMBL:AC090386
EMBL:AC093332 EMBL:AC129908 Ensembl:ENST00000589386 Uniprot:K7EJD7
Length = 185
Score = 125 (49.1 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 39/118 (33%), Positives = 58/118 (49%)
Query: 255 PARKARPTPPNADQQSPA----MAKPAPVPEASALSSDGAPENSNV-----NEEAEGCSI 305
PA+ PT + QQ+ A A PA P A S P+ + E EGC++
Sbjct: 59 PAQS--PTAADPLQQAYAGVQQYAGPAAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNL 116
Query: 306 YVRNLAFTTTSTELEEAFKIFGPIKKNGVQV-RSNKQGYCFGFVAFETPGSVQSALEA 362
++ +L EL + F FG + + V V R+ Q CFGFV+F+ P S Q+A++A
Sbjct: 117 FIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQTAIQA 174
>MGI|MGI:1923433 [details] [associations]
symbol:Celf6 "CUGBP, Elav-like family member 6"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
MGI:MGI:1923433 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 HSSP:Q92879
HOVERGEN:HBG107646 KO:K13207 eggNOG:NOG251494 HOGENOM:HOG000004754
GeneTree:ENSGT00560000076837 GO:GO:0000381 OrthoDB:EOG4RJG30
CTD:60677 EMBL:AK034216 EMBL:BC052406 EMBL:BC057083 IPI:IPI00222250
IPI:IPI00853853 RefSeq:NP_780444.2 UniGene:Mm.265415
ProteinModelPortal:Q7TN33 SMR:Q7TN33 PhosphoSite:Q7TN33
PRIDE:Q7TN33 Ensembl:ENSMUST00000034840 Ensembl:ENSMUST00000121266
GeneID:76183 KEGG:mmu:76183 UCSC:uc009pxx.1 UCSC:uc009pxy.1
NextBio:344727 Bgee:Q7TN33 CleanEx:MM_BRUNOL6 Genevestigator:Q7TN33
Uniprot:Q7TN33
Length = 460
Score = 136 (52.9 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 36/110 (32%), Positives = 55/110 (50%)
Query: 271 PAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIK 330
PA A P ++A S + E EGC++++ +L EL + F FG +
Sbjct: 343 PAAYPSAYAPASTAFSQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVV 402
Query: 331 KNGVQV-RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
V V R+ Q CFGFV+F+ P S Q+A++A + IG + V+ KR
Sbjct: 403 SAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKR 452
>UNIPROTKB|F1PXQ8 [details] [associations]
symbol:CELF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K13207
GeneTree:ENSGT00560000076837 CTD:60680 OMA:DGMKDLD
EMBL:AAEX03012581 RefSeq:XP_854891.3 Ensembl:ENSCAFT00000030591
GeneID:612072 KEGG:cfa:612072 Uniprot:F1PXQ8
Length = 485
Score = 136 (52.9 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 49/163 (30%), Positives = 73/163 (44%)
Query: 230 APEKKSYASIVKVMKGYNISSAAY----VPARKARPT------PP-NADQQSPAMAKPAP 278
AP +A +V G+ Y VP PT P + QQ AM A
Sbjct: 315 APITNGFAGVVPFPGGHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAA 374
Query: 279 V-PEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQV- 336
+ P A ++ E EGC++++ +L TEL + F FG I + V +
Sbjct: 375 ITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMD 434
Query: 337 RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
R+ Q CFGFV+F+ P S Q+A++A + IG + V+ KR
Sbjct: 435 RATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKR 477
>UNIPROTKB|Q8N6W0 [details] [associations]
symbol:CELF5 "CUGBP Elav-like family member 5" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 EMBL:CH471139 HOVERGEN:HBG107646
KO:K13207 eggNOG:NOG251494 OrthoDB:EOG4RJG30 EMBL:AB209067
EMBL:AC005331 EMBL:AC006505 EMBL:AC010649 EMBL:AC123911
EMBL:BC028101 EMBL:AF329266 EMBL:AF248649 IPI:IPI00171157
IPI:IPI00853054 RefSeq:NP_001166144.1 RefSeq:NP_068757.2
UniGene:Hs.655747 PDB:2DNH PDBsum:2DNH ProteinModelPortal:Q8N6W0
SMR:Q8N6W0 STRING:Q8N6W0 PhosphoSite:Q8N6W0 DMDM:74762534
PRIDE:Q8N6W0 DNASU:60680 Ensembl:ENST00000292672
Ensembl:ENST00000541430 GeneID:60680 KEGG:hsa:60680 UCSC:uc002lxl.2
UCSC:uc010dtj.2 CTD:60680 GeneCards:GC19P003224 HGNC:HGNC:14058
HPA:HPA042012 MIM:612680 neXtProt:NX_Q8N6W0 PharmGKB:PA25429
InParanoid:Q8N6W0 OMA:DGMKDLD PhylomeDB:Q8N6W0
EvolutionaryTrace:Q8N6W0 GenomeRNAi:60680 NextBio:65500
ArrayExpress:Q8N6W0 Bgee:Q8N6W0 CleanEx:HS_BRUNOL5
Genevestigator:Q8N6W0 Uniprot:Q8N6W0
Length = 485
Score = 136 (52.9 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 49/163 (30%), Positives = 73/163 (44%)
Query: 230 APEKKSYASIVKVMKGYNISSAAY----VPARKARPT------PP-NADQQSPAMAKPAP 278
AP +A +V G+ Y VP PT P + QQ AM A
Sbjct: 315 APITNGFAGVVPFPGGHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAA 374
Query: 279 V-PEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQV- 336
+ P A ++ E EGC++++ +L TEL + F FG I + V +
Sbjct: 375 ITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMD 434
Query: 337 RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
R+ Q CFGFV+F+ P S Q+A++A + IG + V+ KR
Sbjct: 435 RATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 477
>UNIPROTKB|F1MD42 [details] [associations]
symbol:F1MD42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00560000076837 EMBL:DAAA02019657 EMBL:DAAA02019658
EMBL:DAAA02019659 EMBL:DAAA02019660 EMBL:DAAA02019661
IPI:IPI00713955 ProteinModelPortal:F1MD42
Ensembl:ENSBTAT00000029023 OMA:PAQSPTM Uniprot:F1MD42
Length = 489
Score = 136 (52.9 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 49/163 (30%), Positives = 73/163 (44%)
Query: 230 APEKKSYASIVKVMKGYNISSAAY----VPARKARPT------PP-NADQQSPAMAKPAP 278
AP +A +V G+ Y VP PT P + QQ AM A
Sbjct: 319 APITNGFAGVVPFPGGHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAA 378
Query: 279 V-PEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQV- 336
+ P A ++ E EGC++++ +L TEL + F FG I + V +
Sbjct: 379 ITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMD 438
Query: 337 RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
R+ Q CFGFV+F+ P S Q+A++A + IG + V+ KR
Sbjct: 439 RATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKR 481
>UNIPROTKB|B3KWE6 [details] [associations]
symbol:BRUNOL6 "cDNA FLJ42868 fis, clone BRHIP2021615,
highly similar to Homo sapiens bruno-like 6, RNA binding protein,
mRNA" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:CH471082 HOVERGEN:HBG107646 HOGENOM:HOG000004754 EMBL:AC009690
UniGene:Hs.348342 HGNC:HGNC:14059 EMBL:AK124858 IPI:IPI01012509
SMR:B3KWE6 STRING:B3KWE6 Ensembl:ENST00000539635 Uniprot:B3KWE6
Length = 342
Score = 130 (50.8 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 35/104 (33%), Positives = 52/104 (50%)
Query: 277 APVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQV 336
APV A P+ E EGC++++ +L EL + F FG + V V
Sbjct: 233 APVSTAFPQQPSALPQQQR--EGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFV 290
Query: 337 -RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
R+ Q CFGFV+F+ P S Q+A++A + IG + V+ KR
Sbjct: 291 DRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKR 334
Score = 43 (20.2 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 206 EPPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPN 265
+P S+++ N + + D P +++YA + Y +AY P A P P+
Sbjct: 189 QPGSDTLYNNGLSPYPAQSPGVAD-PLQQAYAGMHHYAAAY---PSAYAPVSTAFPQQPS 244
Query: 266 A 266
A
Sbjct: 245 A 245
Score = 41 (19.5 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 14/61 (22%), Positives = 27/61 (44%)
Query: 222 SAPVAQGDAPEKKSYASIVKVMK---GYNISSAAYVPARKARPTPPNADQQSPAMAKPAP 278
+A +A P A++ M+ +++ +A +PA A P + P + PAP
Sbjct: 116 AALLAAAQGPGLGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPPGSGPGTLPGL--PAP 173
Query: 279 V 279
+
Sbjct: 174 I 174
>ZFIN|ZDB-GENE-040718-300 [details] [associations]
symbol:celf4 "CUGBP, Elav-like family member 4"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-040718-300 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 HSSP:Q92879
HOVERGEN:HBG107646 KO:K13207 GO:GO:0048026 eggNOG:NOG251494
HOGENOM:HOG000004754 OrthoDB:EOG4RJG30 EMBL:BC076238
IPI:IPI00491989 RefSeq:NP_001002562.1 UniGene:Dr.81398
ProteinModelPortal:Q6DGV1 SMR:Q6DGV1 GeneID:436835 KEGG:dre:436835
CTD:56853 InParanoid:Q6DGV1 NextBio:20831267 ArrayExpress:Q6DGV1
Bgee:Q6DGV1 Uniprot:Q6DGV1
Length = 520
Score = 135 (52.6 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 41/143 (28%), Positives = 71/143 (49%)
Query: 246 YNISSAAYVPARKARPTPPNAD--QQSPA-MAKPAPVPEASALSSDGAPENSNV-----N 297
+ + + ++ + +P AD QQ+ A + + A P A S P+ +
Sbjct: 370 FGVQGSCFLSSLSEAQSPTAADPLQQAYAGVQQYAAFPAAYGQISQAFPQPPPIIPQQQR 429
Query: 298 EEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQV-RSNKQGYCFGFVAFETPGSV 356
E EGC++++ +L EL + F FG + + V V R+ Q CFGFV+F+ PGS
Sbjct: 430 EGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSA 489
Query: 357 QSALEA-SPILIGDRPADVEAKR 378
Q+A+++ + IG + V+ KR
Sbjct: 490 QAAIQSMNGFQIGMKRLKVQLKR 512
>UNIPROTKB|F1P5J4 [details] [associations]
symbol:BRUNOL6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00560000076837 EMBL:AADN02051058 EMBL:AADN02051059
IPI:IPI00591656 Ensembl:ENSGALT00000003051 Uniprot:F1P5J4
Length = 354
Score = 132 (51.5 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 52/189 (27%), Positives = 81/189 (42%)
Query: 204 IVEPPSNSVQNEVHASVDSAPVAQGDAP-EKKSYASIVKVMKGYNISSAAYVPARKARP- 261
+ P + S + +APV P ++ + G S Y P
Sbjct: 158 VAAPLTPSSGTSTPPGISTAPVPSIATPIGVNGFSPLPPQTNGQPTSETIYTNGIHPYPA 217
Query: 262 -TPPNAD--QQSPAMAK--PAPVPEASALSSDGAPENSNV-----NEEAEGCSIYVRNLA 311
+P AD QQ+ A + A P A A S P+ + + E EGC++++ +L
Sbjct: 218 QSPTVADPLQQAYAGMQHYAAAYPTAYAPISQAFPQQAPIIPQQQREGPEGCNLFIYHLP 277
Query: 312 FTTTSTELEEAFKIFGPIKKNGVQV-RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGD 369
EL + F FG + V V R+ Q CFGFV+F+ P S Q+A++A + IG
Sbjct: 278 QEFGDAELTQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSAQAAIQAMNGFQIGM 337
Query: 370 RPADVEAKR 378
+ V+ KR
Sbjct: 338 KRLKVQLKR 346
>UNIPROTKB|D6RBM9 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30291 EMBL:AC104828
IPI:IPI01019015 ProteinModelPortal:D6RBM9 SMR:D6RBM9
Ensembl:ENST00000509561 ArrayExpress:D6RBM9 Bgee:D6RBM9
Uniprot:D6RBM9
Length = 78
Score = 110 (43.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIK 79
LSLN+ + +I+
Sbjct: 66 LSLNFSECHTKIR 78
>SGD|S000005334 [details] [associations]
symbol:BRE5 "Ubiquitin protease cofactor" species:4932
"Saccharomyces cerevisiae" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0016579 "protein deubiquitination" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] [GO:0060628 "regulation of ER to
Golgi vesicle-mediated transport" evidence=IMP] [GO:2000156
"regulation of retrograde vesicle-mediated transport, Golgi to ER"
evidence=IMP] [GO:0006810 "transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0034517 "ribophagy" evidence=IMP] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002075
Pfam:PF02136 PROSITE:PS50102 SMART:SM00360 SGD:S000005334
GO:GO:0005737 GO:GO:0006810 EMBL:BK006947 GO:GO:0003723
GO:GO:0060628 GO:GO:0016579 EMBL:Z71666 EMBL:AY692784 EMBL:M88607
PIR:S63382 RefSeq:NP_014449.1 PDB:1ZX2 PDB:2QIY PDBsum:1ZX2
PDBsum:2QIY ProteinModelPortal:P53741 SMR:P53741 DIP:DIP-4254N
IntAct:P53741 MINT:MINT-483528 STRING:P53741 PaxDb:P53741
PeptideAtlas:P53741 EnsemblFungi:YNR051C GeneID:855787
KEGG:sce:YNR051C CYGD:YNR051c eggNOG:NOG311655 HOGENOM:HOG000057133
OMA:YPIYIRG OrthoDB:EOG4N33ZJ EvolutionaryTrace:P53741
NextBio:980268 Genevestigator:P53741 GermOnline:YNR051C
GO:GO:2000156 GO:GO:0034517 InterPro:IPR018222 PROSITE:PS50177
Uniprot:P53741
Length = 515
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 64/302 (21%), Positives = 116/302 (38%)
Query: 18 AFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTT----------VTTMKAINDRIL 67
AF++ YY + P + FY ++ L+ + T VT + IN +
Sbjct: 11 AFLQNYYERMRTDPSKLAYFYASTAELTHTNYQSKSTNEKDDVLPTVKVTGRENIN-KFF 69
Query: 68 SLN---YEDYTAEIKTADAQDS--YEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGG 122
S N ++ T D Q + K ++++ TG + KF QTF L P G
Sbjct: 70 SRNDAKVRSLKLKLDTIDFQYTGHLHKSILIMATGEMFWTGTPVYKFCQTFILLPSSNGS 129
Query: 123 YF-VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIEGED 181
F + ND+ RF + +V+ A ++D I + + E E
Sbjct: 130 TFDITNDIIRFISNSFKPYVLTDASLSQSNEENSVS-----AVEEDKIRHESGVEKEKEK 184
Query: 182 LDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEV--HASVDSAPVAQGDAPEKKSYASI 239
+ PE+ P K+E V+D S++ + + H+ + PV + ++ S
Sbjct: 185 -EKSPEISKPKAKKE--TVKDTTAPTESSTQEKPIVDHSQPRAIPVTKESKIHTETVPSS 241
Query: 240 VKVM-KGYNISSAAYVPARKARPTPPNADQQS-PAMAKPAPVPEASALSSDGAPENSNVN 297
K K +S+ K A++++ P K V +A+++ P V+
Sbjct: 242 TKGNHKQDEVSTEELGNVTKLNEKSHKAEKKAAPIKTKEGSVEAINAVNNSSLPNGKEVS 301
Query: 298 EE 299
+E
Sbjct: 302 DE 303
>RGD|1310451 [details] [associations]
symbol:Celf6 "CUGBP, Elav-like family member 6" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1310451 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00560000076837 GO:GO:0000381 OrthoDB:EOG4RJG30
OMA:MQHVAAF IPI:IPI00369994 Ensembl:ENSRNOT00000014450
UCSC:RGD:1310451 Uniprot:D4ABS9
Length = 460
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 37/110 (33%), Positives = 55/110 (50%)
Query: 276 PAPVPEASALSSDGAPENSNV-----NEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIK 330
PA P A A S P+ + E EGC++++ +L EL + F FG +
Sbjct: 343 PAAYPSAYAPVSTAFPQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVV 402
Query: 331 KNGVQV-RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
V V R+ Q CFGFV+F+ P S Q+A++A + IG + V+ KR
Sbjct: 403 SAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKR 452
>UNIPROTKB|F1NYP4 [details] [associations]
symbol:CELF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00560000076837 OMA:EDSEKNG EMBL:AADN02067588
EMBL:AADN02067589 EMBL:AADN02067590 EMBL:AADN02067591
EMBL:AADN02067592 EMBL:AADN02067593 EMBL:AADN02067594
EMBL:AADN02067595 EMBL:AADN02067596 IPI:IPI00590965
Ensembl:ENSGALT00000003800 Uniprot:F1NYP4
Length = 361
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 38/116 (32%), Positives = 56/116 (48%)
Query: 266 ADQQSPAMAKPAPVPEASALSSDGAPENSNVNEEA-EGCSIYVRNLAFTTTSTELEEAFK 324
A Q A A PA + S P E EGC++++ +L EL + F
Sbjct: 238 AGVQQYAAAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFL 297
Query: 325 IFGPIKKNGVQV-RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
FG + + V V R+ Q CFGFV+F+ P S Q+A++A + IG + V+ KR
Sbjct: 298 PFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 353
>UNIPROTKB|Q96J87 [details] [associations]
symbol:CELF6 "CUGBP Elav-like family member 6" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=NAS] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IDA] [GO:0003723 "RNA binding"
evidence=NAS] [GO:0005737 "cytoplasm" evidence=NAS]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 HOVERGEN:HBG107646
KO:K13207 eggNOG:NOG251494 HOGENOM:HOG000004754 GO:GO:0000381
OrthoDB:EOG4RJG30 EMBL:AF401233 EMBL:AF425606 EMBL:AK131098
EMBL:AK294382 EMBL:AK296004 EMBL:AC009690 EMBL:BC030835
EMBL:BC033838 IPI:IPI00171103 IPI:IPI00793692 IPI:IPI00909307
IPI:IPI00922660 RefSeq:NP_001166155.1 RefSeq:NP_001166156.1
RefSeq:NP_443072.3 UniGene:Hs.348342 PDB:2DGQ PDBsum:2DGQ
ProteinModelPortal:Q96J87 SMR:Q96J87 STRING:Q96J87
PhosphoSite:Q96J87 DMDM:74760888 PRIDE:Q96J87
Ensembl:ENST00000287202 Ensembl:ENST00000395258
Ensembl:ENST00000543764 Ensembl:ENST00000567083
Ensembl:ENST00000569547 GeneID:60677 KEGG:hsa:60677 UCSC:uc002auh.2
UCSC:uc002auj.2 CTD:60677 GeneCards:GC15M072577 H-InvDB:HIX0012406
HGNC:HGNC:14059 MIM:612681 neXtProt:NX_Q96J87 PharmGKB:PA25430
InParanoid:Q96J87 OMA:MQHVAAF PhylomeDB:Q96J87
EvolutionaryTrace:Q96J87 GenomeRNAi:60677 NextBio:65492
ArrayExpress:Q96J87 Bgee:Q96J87 CleanEx:HS_BRUNOL6
Genevestigator:Q96J87 Uniprot:Q96J87
Length = 481
Score = 130 (50.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 35/104 (33%), Positives = 52/104 (50%)
Query: 277 APVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQV 336
APV A P+ E EGC++++ +L EL + F FG + V V
Sbjct: 372 APVSTAFPQQPSALPQQQR--EGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFV 429
Query: 337 -RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
R+ Q CFGFV+F+ P S Q+A++A + IG + V+ KR
Sbjct: 430 DRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKR 473
Score = 43 (20.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 206 EPPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPN 265
+P S+++ N + + D P +++YA + Y +AY P A P P+
Sbjct: 328 QPGSDTLYNNGLSPYPAQSPGVAD-PLQQAYAGMHHYAAAY---PSAYAPVSTAFPQQPS 383
Query: 266 A 266
A
Sbjct: 384 A 384
Score = 41 (19.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 14/61 (22%), Positives = 27/61 (44%)
Query: 222 SAPVAQGDAPEKKSYASIVKVMK---GYNISSAAYVPARKARPTPPNADQQSPAMAKPAP 278
+A +A P A++ M+ +++ +A +PA A P + P + PAP
Sbjct: 255 AALLAAAQGPGLGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPPGSGPGTLPGL--PAP 312
Query: 279 V 279
+
Sbjct: 313 I 313
>RGD|1307630 [details] [associations]
symbol:Celf4 "CUGBP, Elav-like family member 4" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1307630 GO:GO:0005634 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 GO:GO:0000380 GO:GO:0048026 GO:GO:0006376
GeneTree:ENSGT00560000076837 GO:GO:0000381 IPI:IPI00870309
Ensembl:ENSRNOT00000061151 ArrayExpress:F1M6I9 Uniprot:F1M6I9
Length = 355
Score = 129 (50.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 44/135 (32%), Positives = 65/135 (48%)
Query: 255 PARKARPTPPNADQQSPA----MAKPAPVPEASALSSDGAPENSNV-----NEEAEGCSI 305
PA+ PT + QQ+ A A PA P A S P+ + E EGC++
Sbjct: 215 PAQS--PTAADPLQQAYAGVQQYAGPAAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNL 272
Query: 306 YVRNLAFTTTSTELEEAFKIFGPIKKNGVQV-RSNKQGYCFGFVAFETPGSVQSALEA-S 363
+ +L EL + F FG + + V V R+ Q CFGFV+F+ P S Q+A++A +
Sbjct: 273 LIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQTAIQAMN 332
Query: 364 PILIGDRPADVEAKR 378
IG + V+ KR
Sbjct: 333 GFQIGMKRLKVQLKR 347
>UNIPROTKB|Q9Y4C8 [details] [associations]
symbol:RBM19 "Probable RNA-binding protein 19" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISS;IDA] [GO:0040019 "positive regulation of embryonic
development" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0007275 GO:GO:0005737 GO:GO:0005694
GO:GO:0005654 GO:GO:0005730 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0040019 eggNOG:COG0724 KO:K14787
HOGENOM:HOG000211156 OMA:VFREKNV EMBL:AB014582 EMBL:AL117547
EMBL:AC009731 EMBL:AC073863 EMBL:AC090669 EMBL:BC004289
EMBL:BC006137 IPI:IPI00000686 PIR:T17297 RefSeq:NP_001140170.1
RefSeq:NP_001140171.1 RefSeq:NP_057280.2 UniGene:Hs.7482 PDB:2DGW
PDBsum:2DGW ProteinModelPortal:Q9Y4C8 SMR:Q9Y4C8 MINT:MINT-1196129
STRING:Q9Y4C8 PhosphoSite:Q9Y4C8 DMDM:308153566 SWISS-2DPAGE:Q9Y4C8
PaxDb:Q9Y4C8 PRIDE:Q9Y4C8 DNASU:9904 Ensembl:ENST00000261741
Ensembl:ENST00000392561 Ensembl:ENST00000545145 GeneID:9904
KEGG:hsa:9904 UCSC:uc001tvm.3 CTD:9904 GeneCards:GC12M114259
HGNC:HGNC:29098 HPA:HPA038860 neXtProt:NX_Q9Y4C8
PharmGKB:PA134886784 HOVERGEN:HBG055637 InParanoid:Q9Y4C8
OrthoDB:EOG4D7Z56 PhylomeDB:Q9Y4C8 ChiTaRS:RBM19
EvolutionaryTrace:Q9Y4C8 GenomeRNAi:9904 NextBio:37345 Bgee:Q9Y4C8
CleanEx:HS_RBM19 Genevestigator:Q9Y4C8 GermOnline:ENSG00000122965
Uniprot:Q9Y4C8
Length = 960
Score = 134 (52.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 257 RKARPTPPNADQQSPAMAKPAP---VPEASALSSDGAPENSNVNEEAE-----------G 302
+K + TP ++ PA + P PE + +GA +S EE E G
Sbjct: 670 KKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPG 729
Query: 303 CSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYC----FGFVAFETPGSVQS 358
C+++++NL F TT +L+E F G +K + + NK G FGFV + P Q
Sbjct: 730 CTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQK 789
Query: 359 ALE 361
AL+
Sbjct: 790 ALK 792
>UNIPROTKB|F1SHM1 [details] [associations]
symbol:CELF6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00560000076837 GO:GO:0000381 OMA:MQHVAAF
EMBL:CU012037 Ensembl:ENSSSCT00000002157 Uniprot:F1SHM1
Length = 482
Score = 129 (50.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 43/140 (30%), Positives = 64/140 (45%)
Query: 246 YNISSAAYVPARKARPTPP----NADQQSPAMAKP-APVPEASALSSDGAPENSNVNEEA 300
YN + Y PA+ P A A A P A P ++ S + E
Sbjct: 336 YNNGLSPY-PAQSPGVADPLQQAYAGMHHYAAAYPSAYAPVSTTFSQQPSALPQQQREGP 394
Query: 301 EGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQV-RSNKQGYCFGFVAFETPGSVQSA 359
EGC++++ +L EL + F FG + V V R+ Q CFGFV+F+ P S Q+A
Sbjct: 395 EGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTA 454
Query: 360 LEA-SPILIGDRPADVEAKR 378
++A + IG + V+ KR
Sbjct: 455 IQAMNGFQIGMKRLKVQLKR 474
>ZFIN|ZDB-GENE-110408-50 [details] [associations]
symbol:celf3b "cugbp, Elav-like family member 3b"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-110408-50 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00560000076837
EMBL:BX005277 EMBL:CABZ01052818 EMBL:CABZ01052819 EMBL:CABZ01052820
EMBL:CABZ01052821 EMBL:CABZ01052822 IPI:IPI00506596
Ensembl:ENSDART00000024206 Uniprot:E7F293
Length = 442
Score = 128 (50.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 30/84 (35%), Positives = 48/84 (57%)
Query: 297 NEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQV-RSNKQGYCFGFVAFETPGS 355
N EGC++++ +L T +E+ + F FG + V V R+ Q CFGFV+F+ P S
Sbjct: 351 NTGPEGCNVFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPAS 410
Query: 356 VQSALEA-SPILIGDRPADVEAKR 378
Q+A++A + IG + V+ KR
Sbjct: 411 AQTAIQAMNGFQIGMKRLKVQLKR 434
>UNIPROTKB|G4MRZ3 [details] [associations]
symbol:MGG_02479 "Nuclear transport factor 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002075 Pfam:PF02136
GO:GO:0005635 GO:GO:0006606 EMBL:CM001231 InterPro:IPR018222
PROSITE:PS50177 RefSeq:XP_003709274.1 ProteinModelPortal:G4MRZ3
EnsemblFungi:MGG_02479T0 GeneID:2681576 KEGG:mgr:MGG_02479
Uniprot:G4MRZ3
Length = 126
Score = 105 (42.0 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 36/124 (29%), Positives = 55/124 (44%)
Query: 13 QVVGNAFVEQYYHILHQS----PGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILS 68
Q V FV+ YY + + Y D S+L+ + T AI +++
Sbjct: 5 QAVATEFVQFYYSEFDKGREARAAWSNLVYTDQSVLTFESTEHRGKT-----AIAEKLSG 59
Query: 69 LNYEDYTAEIKTADAQDSYEKGVIVLVTG-CLTGKDNVKKKFTQTFFLAPQDKGGYFVLN 127
L +E ++ T D Q + G+I+LVTG L ++ F+Q F L D Y LN
Sbjct: 60 LPFEVVKHQVSTLDVQTTVHDGIIILVTGQLLVDEEQRPMNFSQVFQLLKADDRWY-ALN 118
Query: 128 DVFR 131
DVF+
Sbjct: 119 DVFK 122
>WB|WBGene00013293 [details] [associations]
symbol:Y57G11A.5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:Z99279
RefSeq:NP_502757.2 ProteinModelPortal:O18219 SMR:O18219
EnsemblMetazoa:Y57G11A.5 GeneID:190364 KEGG:cel:CELE_Y57G11A.5
UCSC:Y57G11A.5 CTD:190364 WormBase:Y57G11A.5 eggNOG:NOG301947
HOGENOM:HOG000020379 InParanoid:O18219 OMA:KKICDLE Uniprot:O18219
Length = 110
Score = 105 (42.0 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 29/87 (33%), Positives = 41/87 (47%)
Query: 291 PENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYCFGFVAF 350
P+N E +YV N+ F T E+E F + GPIK + + G F FV F
Sbjct: 5 PQNRKRKRNVENRQVYVGNMPFDATEKEIEAVFSVMGPIKS--IWMAKRPPG--FAFVTF 60
Query: 351 ETPGSVQSALEASPILIGDRPADVEAK 377
+ +V A +A L G + D+EAK
Sbjct: 61 KR--TVH-AFDAVKYLNGKKICDLEAK 84
>UNIPROTKB|E1B8K2 [details] [associations]
symbol:CELF6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00560000076837 GO:GO:0000381 OMA:MQHVAAF
EMBL:DAAA02027998 IPI:IPI00694457 ProteinModelPortal:E1B8K2
Ensembl:ENSBTAT00000018735 Uniprot:E1B8K2
Length = 482
Score = 127 (49.8 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 42/140 (30%), Positives = 63/140 (45%)
Query: 246 YNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAPENSNV-----NEEA 300
YN + Y PA+ P + A P A A S P+ + E
Sbjct: 336 YNNGLSPY-PAQSPGVADPLQQAYAGMHHYAAAYPSAYAPVSTTFPQQPSALPQQQREGP 394
Query: 301 EGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQV-RSNKQGYCFGFVAFETPGSVQSA 359
EGC++++ +L EL + F FG + V V R+ Q CFGFV+F+ P S Q+A
Sbjct: 395 EGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTA 454
Query: 360 LEA-SPILIGDRPADVEAKR 378
++A + IG + V+ KR
Sbjct: 455 IQAMNGFQIGMKRLKVQLKR 474
>UNIPROTKB|F1SAI1 [details] [associations]
symbol:CELF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090394 "negative regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0048026 "positive regulation
of mRNA splicing, via spliceosome" evidence=IEA] [GO:0006376 "mRNA
splice site selection" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IEA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0000380 GO:GO:0048026
GO:GO:0006376 GeneTree:ENSGT00560000076837 GO:GO:0000381
OMA:SAMESIN EMBL:CU442705 EMBL:FP102263 Ensembl:ENSSSCT00000004150
Uniprot:F1SAI1
Length = 371
Score = 124 (48.7 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 38/114 (33%), Positives = 54/114 (47%)
Query: 268 QQSPAMAKPAPVPEASALSSDGAPENSNVNEEA-EGCSIYVRNLAFTTTSTELEEAFKIF 326
QQ A A PA + S P E EGC++++ +L EL + F F
Sbjct: 251 QQYAAAAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNLFICHLPQEFGDAELMQMFLPF 310
Query: 327 GP-IKKNGVQVRSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
G I R+N Q CFGFV+F+ P S Q+A++A + IG + V+ KR
Sbjct: 311 GNGISSKAFVDRTN-QSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKR 363
>UNIPROTKB|F1RKD1 [details] [associations]
symbol:RBM19 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0040019 "positive regulation of embryonic development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0040019 OMA:VFREKNV
GeneTree:ENSGT00700000104575 EMBL:CT971483
Ensembl:ENSSSCT00000010816 Uniprot:F1RKD1
Length = 965
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 31/104 (29%), Positives = 48/104 (46%)
Query: 264 PNADQQSPAMAKPAP--VPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEE 321
P ++P + KP ASA + E E GC+++++NL F+TT L+
Sbjct: 694 PMPGGETPEVEKPTEGGADAASAKVEEEEEEEEEEEESLPGCTLFIKNLNFSTTEETLKG 753
Query: 322 AFKIFGPIKKNGVQVRSNKQGYC----FGFVAFETPGSVQSALE 361
F G +K + + NK G FGFV ++ P Q AL+
Sbjct: 754 VFSKVGAVKSCSISKKKNKAGALLSMGFGFVEYKKPEQAQKALK 797
>FB|FBgn0264001 [details] [associations]
symbol:bru-3 "bruno-3" species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0017148 "negative regulation of translation" evidence=ISA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0043234 GO:GO:0042803 EMBL:AE014296 GO:GO:0017148
GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 HSSP:P19339
KO:K13207 GeneTree:ENSGT00560000076837 FlyBase:FBgn0264001
UniGene:Dm.13624 GeneID:39527 KEGG:dme:Dmel_CG12478 CTD:39527
GenomeRNAi:39527 NextBio:814113 EMBL:AY060398 RefSeq:NP_729923.1
SMR:Q9VU91 IntAct:Q9VU91 MINT:MINT-899406 STRING:Q9VU91
EnsemblMetazoa:FBtr0330343 UCSC:CG12478-RA InParanoid:Q9VU91
OMA:HALNGEY Uniprot:Q9VU91
Length = 422
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 34/110 (30%), Positives = 54/110 (49%)
Query: 271 PAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIK 330
P +A AP L G + EGC++++ +L EL + F FG +
Sbjct: 310 PPLAAVAPTQREDFLMFPGCSISG-----PEGCNLFIYHLPQEFGDAELMQMFLPFGNVI 364
Query: 331 KNGVQV-RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGDRPADVEAKR 378
+ V + R+ Q CFGFV+F+ P S Q+A++A + IG + V+ KR
Sbjct: 365 SSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKR 414
>ZFIN|ZDB-GENE-050208-746 [details] [associations]
symbol:celf5 "cugbp, Elav-like family member 5"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-050208-746 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00560000076837
EMBL:BX510913 EMBL:AL929135 EMBL:BX664613 IPI:IPI00633183
Ensembl:ENSDART00000093310 Bgee:F1R633 Uniprot:F1R633
Length = 597
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 51/189 (26%), Positives = 83/189 (43%)
Query: 207 PPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVMKGYNISSAAYV----PARKARPT 262
PP+N + V + V P+ G + SI G+ A Y P PT
Sbjct: 410 PPANITTSAVPSIV--TPIVNG-------FTSIPHQPNGHPAVEAVYTNGLPPYSTQSPT 460
Query: 263 PPNADQQS-PAMAKPAPVPEASALSSDGA--PENSNV--------NEEAEGCSIYVRNLA 311
+ QQ+ + + + A+ L+ G P+ V E EGC++++ +L
Sbjct: 461 AADTLQQAFTGVQQYTAIYPATTLTPIGQSLPQPPQVIQQQQQREGEGPEGCNLFIYHLP 520
Query: 312 FTTTSTELEEAFKIFGPIKKNGVQV-RSNKQGYCFGFVAFETPGSVQSALEA-SPILIGD 369
EL + F FG + + V + R+ Q CFGFV+F+ P S Q+A++A + IG
Sbjct: 521 QEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGM 580
Query: 370 RPADVEAKR 378
+ V+ KR
Sbjct: 581 KRLKVQLKR 589
>UNIPROTKB|E2RRF5 [details] [associations]
symbol:RBM19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OMA:VFREKNV
GeneTree:ENSGT00700000104575 EMBL:AAEX03014696
Ensembl:ENSCAFT00000014561 Uniprot:E2RRF5
Length = 968
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 33/113 (29%), Positives = 51/113 (45%)
Query: 255 PARKARPTPPNADQQSPAMAKPAP--VPEASALSSDGAPENSNVNEEAEGCSIYVRNLAF 312
PA + R P ++ +P KPA + A + E E GC+++++NL F
Sbjct: 681 PAEEDRAEPETYNE-TPEGEKPAEGRAEDCPAKVEEEEEEEEEEEESLPGCTLFIKNLNF 739
Query: 313 TTTSTELEEAFKIFGPIKKNGVQVRSNKQGYC----FGFVAFETPGSVQSALE 361
+TT L+ F G +K + + NK G FGFV + P Q AL+
Sbjct: 740 STTEETLKGVFSKAGMVKSCSISKKKNKAGELLSMGFGFVEYRKPEQAQKALK 792
>UNIPROTKB|F1P1R2 [details] [associations]
symbol:RBM19 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0040019
GeneTree:ENSGT00700000104575 EMBL:AADN02050416 IPI:IPI00822335
Ensembl:ENSGALT00000013489 Uniprot:F1P1R2
Length = 621
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 281 EASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNK 340
E ++ + E + E GC+++++NL FTTT L+E F G +K + + +K
Sbjct: 371 EETSAQDEEEDEEEDEEESIPGCTLFIKNLNFTTTEGTLKETFSKVGAVKSCTISKKKDK 430
Query: 341 QGYC----FGFVAFETPGSVQSAL 360
G FGFV ++ P S Q AL
Sbjct: 431 AGTLLSMGFGFVEYKKPESAQKAL 454
>CGD|CAL0001254 [details] [associations]
symbol:orf19.1086 species:5476 "Candida albicans" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0034517 "ribophagy" evidence=IEA]
[GO:0016579 "protein deubiquitination" evidence=IEA] [GO:2000156
"regulation of retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] [GO:0060628 "regulation of ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR000504
InterPro:IPR002075 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
CGD:CAL0001254 GO:GO:0006810 GO:GO:0003676 GO:GO:0005622
EMBL:AACQ01000168 InterPro:IPR018222 PROSITE:PS50177
RefSeq:XP_712099.1 ProteinModelPortal:Q59QZ9 GeneID:3646280
KEGG:cal:CaO19.1086 Uniprot:Q59QZ9
Length = 622
Score = 92 (37.4 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 78 IKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAP-QDKGGYFVLNDVFRF 132
I +A + S EK +I++V G + D K+FTQTF L P + Y V ND+ +F
Sbjct: 144 ITSACFEVSLEKNIIIVVFGEWSSNDEPYKQFTQTFVLVPGKTDNTYDVANDILKF 199
Score = 63 (27.2 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 29/117 (24%), Positives = 47/117 (40%)
Query: 177 IEGEDLDNGPEVCDPSDKEEGSVVEDEIVEPPSN--SVQNEVHASVDSAPVAQGDAPEKK 234
++ E+ + E +DKE + +D+ V SN SV + +S PV + K+
Sbjct: 305 VKVENQEEKQEKISNTDKE---LTKDDSVNKQSNESSVTTTTSTTQNSKPVVTKNEESKE 361
Query: 235 SYASIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAP 291
A K + V + PT PNA +P + P+ A AL+ P
Sbjct: 362 EKAPSTK-----EETKQPTVKKPQPEPTKPNAAAAAPPQQQQQPLTWA-ALAQQAVP 412
Score = 52 (23.4 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 23/95 (24%), Positives = 40/95 (42%)
Query: 6 GSPAPSA-QV---------VGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTT 55
G+P PSA QV +G F++ YY +H+ Y + ++ G+
Sbjct: 40 GTPKPSATQVQLSQDRASNIGWFFIKSYYDFFISKLDEIHKIYHPHASINHDAFPGTKND 99
Query: 56 VTTMKAINDRILSLNYEDYTAEIKTADA-QDSYEK 89
+ A ND + + Y A K DA ++++ K
Sbjct: 100 KSDSGASNDNVKDVLPIAYKA--KGTDAIKETFSK 132
>UNIPROTKB|B4E241 [details] [associations]
symbol:SFRS3 "Splicing factor, arginine/serine-rich 3,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:CH471081 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:Z85986 OrthoDB:EOG4VDQ12
UniGene:Hs.405144 HGNC:HGNC:10785 ChiTaRS:SRSF3 EMBL:AK304097
IPI:IPI00843996 SMR:B4E241 STRING:B4E241 Ensembl:ENST00000339436
Ensembl:ENST00000477442 UCSC:uc011dtp.1 HOGENOM:HOG000208722
HOVERGEN:HBG104956 Uniprot:B4E241
Length = 124
Score = 98 (39.6 bits), Expect = 0.00023, P = 0.00023
Identities = 24/58 (41%), Positives = 29/58 (50%)
Query: 303 CSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYCFGFVAFETPGSVQSAL 360
C +YV NL TELE AF +GP++ V V N G F FV FE P A+
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRS--VWVARNPPG--FAFVEFEDPRDAADAV 63
>UNIPROTKB|F1NEC5 [details] [associations]
symbol:RBM19 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0040019 OMA:VFREKNV
GeneTree:ENSGT00700000104575 EMBL:AADN02050416 IPI:IPI00586587
Ensembl:ENSGALT00000037991 Uniprot:F1NEC5
Length = 945
Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 281 EASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNK 340
E ++ + E + E GC+++++NL FTTT L+E F G +K + + +K
Sbjct: 695 EETSAQDEEEDEEEDEEESIPGCTLFIKNLNFTTTEGTLKETFSKVGAVKSCTISKKKDK 754
Query: 341 QGYC----FGFVAFETPGSVQSAL 360
G FGFV ++ P S Q AL
Sbjct: 755 AGTLLSMGFGFVEYKKPESAQKAL 778
>UNIPROTKB|F1N0L5 [details] [associations]
symbol:RBM19 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0040019 "positive regulation of embryonic development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0040019 OMA:VFREKNV
GeneTree:ENSGT00700000104575 EMBL:DAAA02045406 EMBL:DAAA02045407
EMBL:DAAA02045408 EMBL:DAAA02045409 EMBL:DAAA02045410
EMBL:DAAA02045411 EMBL:DAAA02045412 IPI:IPI00742584
Ensembl:ENSBTAT00000045133 Uniprot:F1N0L5
Length = 920
Score = 128 (50.1 bits), Expect = 0.00032, Sum P(2) = 0.00031
Identities = 32/105 (30%), Positives = 49/105 (46%)
Query: 264 PNADQQSPAMAKPAP--VPEASALSSDGAPENSNVNEEA-EGCSIYVRNLAFTTTSTELE 320
P D ++P +P +ASA + E EE+ GC+++++NL F TT L+
Sbjct: 648 PETDGETPEGEQPTDRAAHDASAKMEEEEEEEEEEEEESLPGCTLFIKNLNFDTTEETLK 707
Query: 321 EAFKIFGPIKKNGVQVRSNKQGYC----FGFVAFETPGSVQSALE 361
F G +K + + NK G FGFV + P Q AL+
Sbjct: 708 GVFSKVGAVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQKALK 752
Score = 40 (19.1 bits), Expect = 0.00032, Sum P(2) = 0.00031
Identities = 25/76 (32%), Positives = 33/76 (43%)
Query: 174 AIVIEGEDLD--NGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGD-- 229
A+ E D+D V S E S EDE V S ++E S +AP AQ D
Sbjct: 209 AVQKELSDMDYLKSKVVAAESPSSEES--EDEAVNCEEGS-ESEEEGSF-AAP-AQQDRE 263
Query: 230 -APEKKSYASIVKVMK 244
AP KK+ + +K
Sbjct: 264 AAPAKKNVMEFLAPLK 279
>UNIPROTKB|F5H4D6 [details] [associations]
symbol:G3BP1 "Ras GTPase-activating protein-binding protein
1" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 HGNC:HGNC:30292 ChiTaRS:G3BP1 EMBL:AC091982
IPI:IPI01011685 ProteinModelPortal:F5H4D6 SMR:F5H4D6
Ensembl:ENST00000543466 ArrayExpress:F5H4D6 Bgee:F5H4D6
Uniprot:F5H4D6
Length = 284
Score = 116 (45.9 bits), Expect = 0.00032, P = 0.00032
Identities = 60/239 (25%), Positives = 93/239 (38%)
Query: 152 PTANVTEAPEPAHDQDHIPADRAIVIEGEDLDNGPEVCDPSDKEEGSV-VEDEIVEPPSN 210
P A PEP +Q+ P I+ E + E P D ++ S +I +
Sbjct: 8 PVAEPEPDPEPEPEQE--PVSE---IQEEKPEPVLEETAPEDAQKSSSPAPADIAQTVQE 62
Query: 211 SVQNEVHASVDSAPVA-QGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNADQQ 269
++ ASV S + G P +VKV + P + P P DQ+
Sbjct: 63 DLRTFSWASVTSKNLPPSGAVPVTGIPPHVVKVPASQPRPESK--PESQIPPQRPQRDQR 120
Query: 270 S-------PAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEA 322
P P P+ EA G E + + +++ NL +EL++
Sbjct: 121 VREQRINIPPQRGPRPIREAG---EQGDIEPRRMVRHPDSHQLFIGNLPHEVDKSELKDF 177
Query: 323 FKIFGPIKKNGVQVRSNKQGYC--FGFVAFETPGSVQSALEASPILI-GDRPADVEAKR 378
F+ +G N V++R N G FGFV F+ VQ L PI+ G+ +VE K+
Sbjct: 178 FQSYG----NVVELRINSGGKLPNFGFVVFDDSEPVQKVLSNRPIMFRGEVRLNVEEKK 232
>ASPGD|ASPL0000076731 [details] [associations]
symbol:AN4865 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:BN001303 EMBL:AACD01000084 eggNOG:COG0724
KO:K11294 OrthoDB:EOG422DTZ RefSeq:XP_662469.1
ProteinModelPortal:Q5B3L5 STRING:Q5B3L5
EnsemblFungi:CADANIAT00005540 GeneID:2872664 KEGG:ani:AN4865.2
HOGENOM:HOG000195050 OMA:SARIMTE Uniprot:Q5B3L5
Length = 524
Score = 120 (47.3 bits), Expect = 0.00034, P = 0.00034
Identities = 46/207 (22%), Positives = 82/207 (39%)
Query: 157 TEAPEPAHDQDHIPADRAIVIEGEDLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEV 216
+E+ E A+ +V + E ++ SD ++ S E+E+ P + + E
Sbjct: 134 SESEEEKKPAKSAKAEPKVVKKAESSESESSDSSDSDSDDESSEEEEV--PKAKAKAAES 191
Query: 217 HASVDSAPVAQGDAPEK-KSYASIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAK 275
S DS ++ +AP K K A K + S+ + + ++ +S K
Sbjct: 192 SDSEDSDSESEEEAPAKAKGDAKTSKEESDSDSDSSE--SSSDSDEESGSSGSESEDSDK 249
Query: 276 PAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQ 335
PA + A A + EE +++V NL++ T L + F+ FG + +
Sbjct: 250 PADSKKRKAEEEPAAASKKSKTEEGASANLFVGNLSWNVTEEWLHQEFEQFGELSARIMT 309
Query: 336 VRSNKQGYCFGFVAFETPGSVQSALEA 362
R + FG+V F A EA
Sbjct: 310 ERDTGRSRGFGYVEFTNAADAAKAYEA 336
>UNIPROTKB|F1P336 [details] [associations]
symbol:NCL "Nucleolin" species:9031 "Gallus gallus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00550000074656
EMBL:AADN02020638 EMBL:AADN02020639 IPI:IPI00680028
Ensembl:ENSGALT00000033265 ArrayExpress:F1P336 Uniprot:F1P336
Length = 689
Score = 89 (36.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 28/105 (26%), Positives = 46/105 (43%)
Query: 201 EDEIVEPPSNSVQNEVHASVDSAPVAQGDA---PEKKSYASIVKVMKGYNISSAAYVPAR 257
+ ++ PP ++E S D + + P+K+ A++ K + A PA+
Sbjct: 10 QKKMAPPPKKVEESEEEESSDLEESSGEEVMVPPKKQQKAAVTPAKKAATPAKKAATPAK 69
Query: 258 KARPTPPNADQQSPAMAKPAPVPEASALSSDGAPENSNVN-EEAE 301
KA TP +PA AP P+ +A+ GA N EE+E
Sbjct: 70 KA-VTPAKKAVATPAKKAVAPSPKKAAVVGKGAKNGKNAKKEESE 113
Score = 78 (32.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 297 NEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYCFGFVAFETPGSV 356
N++++ +++VR L+ TT L E+F+ G I V R FGFV F +P
Sbjct: 547 NQQSK--TLFVRGLSEDTTEETLRESFE--GSISARIVTDRDTGSSKGFGFVDFSSPEDA 602
Query: 357 QSALEA 362
++A EA
Sbjct: 603 KAAKEA 608
>UNIPROTKB|F1NU40 [details] [associations]
symbol:NCL "Nucleolin" species:9031 "Gallus gallus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042162 "telomeric
DNA binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005938
GO:GO:0005654 GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0042162
GeneTree:ENSGT00550000074656 IPI:IPI00577202 OMA:ENAMEIR
EMBL:AADN02020638 EMBL:AADN02020639 Ensembl:ENSGALT00000012486
ArrayExpress:F1NU40 Uniprot:F1NU40
Length = 691
Score = 89 (36.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 28/105 (26%), Positives = 46/105 (43%)
Query: 201 EDEIVEPPSNSVQNEVHASVDSAPVAQGDA---PEKKSYASIVKVMKGYNISSAAYVPAR 257
+ ++ PP ++E S D + + P+K+ A++ K + A PA+
Sbjct: 14 QKKMAPPPKKVEESEEEESSDLEESSGEEVMVPPKKQQKAAVTPAKKAATPAKKAATPAK 73
Query: 258 KARPTPPNADQQSPAMAKPAPVPEASALSSDGAPENSNVN-EEAE 301
KA TP +PA AP P+ +A+ GA N EE+E
Sbjct: 74 KA-VTPAKKAVATPAKKAVAPSPKKAAVVGKGAKNGKNAKKEESE 117
Score = 78 (32.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 297 NEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYCFGFVAFETPGSV 356
N++++ +++VR L+ TT L E+F+ G I V R FGFV F +P
Sbjct: 549 NQQSK--TLFVRGLSEDTTEETLRESFE--GSISARIVTDRDTGSSKGFGFVDFSSPEDA 604
Query: 357 QSALEA 362
++A EA
Sbjct: 605 KAAKEA 610
>UNIPROTKB|P15771 [details] [associations]
symbol:NCL "Nucleolin" species:9031 "Gallus gallus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000166
GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:COG0724
HOVERGEN:HBG002295 KO:K11294 EMBL:X17199 EMBL:M21791
IPI:IPI00577202 PIR:S08414 RefSeq:NP_990596.1 UniGene:Gga.3663
ProteinModelPortal:P15771 SMR:P15771 STRING:P15771 PRIDE:P15771
GeneID:396201 KEGG:gga:396201 CTD:4691 HOGENOM:HOG000113885
InParanoid:P15771 NextBio:20816253 Uniprot:P15771
Length = 694
Score = 89 (36.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 28/105 (26%), Positives = 46/105 (43%)
Query: 201 EDEIVEPPSNSVQNEVHASVDSAPVAQGDA---PEKKSYASIVKVMKGYNISSAAYVPAR 257
+ ++ PP ++E S D + + P+K+ A++ K + A PA+
Sbjct: 14 QKKMAPPPKKVEESEEEESSDLEESSGEEVMVPPKKQQKAAVTPAKKAATPAKKAATPAK 73
Query: 258 KARPTPPNADQQSPAMAKPAPVPEASALSSDGAPENSNVN-EEAE 301
KA TP +PA AP P+ +A+ GA N EE+E
Sbjct: 74 KA-VTPAKKAVATPAKKAVAPSPKKAAVVGKGAKNGKNAKKEESE 117
Score = 78 (32.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 297 NEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYCFGFVAFETPGSV 356
N++++ +++VR L+ TT L E+F+ G I V R FGFV F +P
Sbjct: 549 NQQSK--TLFVRGLSEDTTEETLRESFE--GSISARIVTDRDTGSSKGFGFVDFSSPEDA 604
Query: 357 QSALEA 362
++A EA
Sbjct: 605 KAAKEA 610
>WB|WBGene00017135 [details] [associations]
symbol:EEED8.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:NOG238057
EMBL:FO081042 HOGENOM:HOG000208465 GeneTree:ENSGT00390000001517
PIR:T15924 RefSeq:NP_495022.2 ProteinModelPortal:Q09295 SMR:Q09295
STRING:Q09295 EnsemblMetazoa:EEED8.4 GeneID:173921
KEGG:cel:CELE_EEED8.4 UCSC:EEED8.4 CTD:173921 WormBase:EEED8.4
InParanoid:Q09295 OMA:KSERASP NextBio:881673 Uniprot:Q09295
Length = 191
Score = 110 (43.8 bits), Expect = 0.00047, P = 0.00047
Identities = 27/91 (29%), Positives = 46/91 (50%)
Query: 291 PENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGV-QVRSNKQGYCFGFVA 349
P + + S+++ N+ F +T E+EE FK G I K + + + K+ F ++
Sbjct: 43 PPTEEEQKAIDAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIE 102
Query: 350 FETPGSVQSALEASPILIGDRPADVEAKRAN 380
F+ S+++AL + L RP V AKR N
Sbjct: 103 FDDSSSIENALVMNGSLFRSRPIVVTAKRTN 133
>UNIPROTKB|H0YKS1 [details] [associations]
symbol:MYEF2 "Myelin expression factor 2" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005794 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC066612 EMBL:AC090526 HGNC:HGNC:17940
Ensembl:ENST00000560172 Uniprot:H0YKS1
Length = 126
Score = 95 (38.5 bits), Expect = 0.00048, P = 0.00048
Identities = 29/91 (31%), Positives = 44/91 (48%)
Query: 291 PENSNVNEE--AEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYCFGFV 348
P S + E ++G I+VRNL F T +L+E F G + +++ + K C G V
Sbjct: 35 PMGSGMRERIGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGKSKGC-GTV 93
Query: 349 AFETPGSVQSALEA-SPILIGDRPADVEAKR 378
F++P S + A + I I R DV R
Sbjct: 94 RFDSPESAEKACRIMNGIKISGREIDVRLDR 124
>UNIPROTKB|A6NDY0 [details] [associations]
symbol:PABPN1L "Embryonic polyadenylate-binding protein 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AC092384
eggNOG:COG0724 HOVERGEN:HBG107480 KO:K14396 EMBL:BC130001
EMBL:BC130002 IPI:IPI00375983 IPI:IPI00854628 IPI:IPI00942797
IPI:IPI01021917 RefSeq:NP_001073956.2 UniGene:Hs.730522
ProteinModelPortal:A6NDY0 SMR:A6NDY0 STRING:A6NDY0
PhosphoSite:A6NDY0 PaxDb:A6NDY0 PRIDE:A6NDY0 DNASU:390748
Ensembl:ENST00000378358 Ensembl:ENST00000411789
Ensembl:ENST00000419291 Ensembl:ENST00000547152 GeneID:390748
KEGG:hsa:390748 UCSC:uc002fmi.3 UCSC:uc010vpd.2 UCSC:uc010vpe.2
CTD:390748 GeneCards:GC16M088928 H-InvDB:HIX0059621 HGNC:HGNC:37237
HPA:HPA043415 neXtProt:NX_A6NDY0 HOGENOM:HOG000208465
InParanoid:A6NDY0 OMA:RCGEVHR GenomeRNAi:390748 NextBio:104019
ArrayExpress:A6NDY0 Bgee:A6NDY0 Genevestigator:A6NDY0
Uniprot:A6NDY0
Length = 278
Score = 112 (44.5 bits), Expect = 0.00087, P = 0.00087
Identities = 54/208 (25%), Positives = 84/208 (40%)
Query: 190 DPSDKEEGSVVED-EIVEPPSNSVQNEVHASVDSAPVAQGDAP------EKKSYASIV-- 240
DP + G+ E EI+ P + E D+ GDA E+++ A
Sbjct: 24 DPEAQGWGAWNETKEILGPEGGEGKEEKEEEEDAEEDQDGDAGFLLSLLEQENLAECPLP 83
Query: 241 -KVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAP----VPEASALSSDGAPENSN 295
+ ++ + A A + P PP QQ+ A PE G PE
Sbjct: 84 DQELEAIKMKVCAMEQA-EGTPRPPGVQQQAEEEEGTAAGQLLSPETVGCPLSGTPEEK- 141
Query: 296 VNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGV---QVRSNKQGYCFGFVAFET 352
EA+ S+YV N+ + ++ ELE F G + + + + + +GY + + F T
Sbjct: 142 --VEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAY--IEFAT 197
Query: 353 PGSVQSALEASPILIGDRPADVEAKRAN 380
GSVQ+A+E L R V KR N
Sbjct: 198 KGSVQAAVELDQSLFRGRVIKVLPKRTN 225
>WB|WBGene00017140 [details] [associations]
symbol:EEED8.12 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:NOG238057
EMBL:FO081042 HOGENOM:HOG000208465 GeneTree:ENSGT00390000001517
PIR:T15923 RefSeq:NP_495021.1 ProteinModelPortal:Q09301 SMR:Q09301
IntAct:Q09301 STRING:Q09301 EnsemblMetazoa:EEED8.12 GeneID:173922
KEGG:cel:CELE_EEED8.12 UCSC:EEED8.12 CTD:173922 WormBase:EEED8.12
InParanoid:Q09301 OMA:HESIFRD NextBio:881677 Uniprot:Q09301
Length = 197
Score = 105 (42.0 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 26/91 (28%), Positives = 46/91 (50%)
Query: 291 PENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGV-QVRSNKQGYCFGFVA 349
P + + S+++ N+ F +T E+EE FK G I + + + + K+ F ++
Sbjct: 49 PPTEEEQKAIDAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIE 108
Query: 350 FETPGSVQSALEASPILIGDRPADVEAKRAN 380
F+ S+++AL + L RP V AKR N
Sbjct: 109 FDDSSSIENALVMNGSLFRSRPIVVTAKRTN 139
Score = 38 (18.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 247 NISSAAYVP 255
N+ SAAYVP
Sbjct: 41 NLESAAYVP 49
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.128 0.362 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 465 383 0.00091 117 3 11 23 0.49 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 108
No. of states in DFA: 587 (62 KB)
Total size of DFA: 216 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.61u 0.11s 40.72t Elapsed: 00:00:02
Total cpu time: 40.62u 0.11s 40.73t Elapsed: 00:00:02
Start: Fri May 10 07:21:25 2013 End: Fri May 10 07:21:27 2013
WARNINGS ISSUED: 1