Query 012359
Match_columns 465
No_of_seqs 273 out of 1709
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 07:54:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012359.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012359hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3psg_A Pepsinogen; hydrolase(a 100.0 9.2E-62 3.2E-66 482.9 25.2 306 76-463 45-370 (370)
2 2x0b_A Renin; hydrolase-hormon 100.0 4.4E-61 1.5E-65 478.8 19.3 309 76-463 50-383 (383)
3 1tzs_A Cathepsin E; hydrolase, 100.0 2.8E-59 9.4E-64 463.0 26.9 312 76-465 12-344 (351)
4 1dpj_A Proteinase A; proteinas 100.0 1.1E-58 3.7E-63 455.0 25.1 307 77-463 3-329 (329)
5 3cms_A Chymosin B; hydrolase, 100.0 4.8E-59 1.6E-63 456.2 21.1 300 77-463 4-323 (323)
6 4aa9_A Chymosin; hydrolase, as 100.0 6.4E-59 2.2E-63 455.1 20.5 301 78-463 2-320 (320)
7 1mpp_A Pepsin; hydrolase(acid 100.0 2.7E-58 9.4E-63 457.9 24.7 311 76-465 7-357 (361)
8 1am5_A Pepsin, acid proteinase 100.0 2.4E-58 8.3E-63 451.5 23.7 302 78-463 3-324 (324)
9 1miq_A Plasmepsin; aspartic pr 100.0 1E-57 3.4E-62 454.6 25.9 303 76-463 51-374 (375)
10 3vla_A EDGP; extracellular, in 100.0 1.4E-57 4.8E-62 458.3 25.7 355 75-462 7-398 (413)
11 1qdm_A Prophytepsin; aspartic 100.0 1.5E-57 5.2E-62 465.2 25.0 321 76-463 41-478 (478)
12 3aup_A SBG7S, BG, basic 7S glo 100.0 1.7E-57 5.8E-62 458.2 24.8 344 75-465 8-395 (403)
13 3qvc_A Histo-aspartic protease 100.0 1.8E-57 6E-62 460.7 24.7 304 75-463 125-449 (451)
14 3c9x_A Trichoderma reesei aspa 100.0 1E-57 3.5E-62 447.7 22.1 297 84-462 12-329 (329)
15 1htr_B Gastricsin; aspartyl pr 100.0 9.1E-58 3.1E-62 448.4 21.4 305 78-463 4-329 (329)
16 1oew_A Endothiapepsin; hydrola 100.0 2E-57 6.8E-62 445.7 21.9 295 85-462 13-329 (329)
17 1j71_A Candidapepsin, aspartic 100.0 1.5E-57 5.1E-62 447.7 20.7 302 76-465 2-326 (334)
18 3k1w_A Renin; protease, altern 100.0 8.8E-58 3E-62 451.1 19.1 310 75-463 6-340 (341)
19 2qzx_A Candidapepsin-5; aspart 100.0 3.8E-57 1.3E-61 446.3 21.3 305 77-465 3-333 (342)
20 2bju_A Plasmepsin II; aspartic 100.0 3E-57 1E-61 458.3 20.9 302 76-463 127-450 (453)
21 2apr_A Rhizopuspepsin; hydrola 100.0 9.6E-57 3.3E-61 440.1 23.5 294 84-463 12-324 (325)
22 3fv3_A SAPP1P-secreted asparti 100.0 1.2E-56 3.9E-61 442.6 23.6 303 77-465 3-331 (339)
23 1yg9_A Aspartic protease BLA G 100.0 1.1E-56 3.7E-61 440.4 21.1 301 76-463 6-329 (330)
24 3pvk_A Candidapepsin-2; hydrol 100.0 1.2E-56 4.2E-61 443.0 21.4 306 77-465 3-333 (342)
25 1ibq_A Aspergillopepsin; aspar 100.0 8.7E-56 3E-60 433.3 21.7 293 85-463 12-325 (325)
26 1izd_A Aspartic proteinase; su 100.0 1.1E-55 3.7E-60 432.1 20.3 291 85-463 13-323 (323)
27 1bxo_A Protein (penicillopepsi 100.0 6.9E-56 2.4E-60 433.6 18.1 291 85-463 13-323 (323)
28 3lpj_A Beta-secretase 1; alzhe 100.0 1.1E-54 3.7E-59 444.4 23.2 322 80-465 67-422 (455)
29 1wkr_A Polyporopepsin; hydrola 100.0 2.3E-54 7.9E-59 426.1 24.5 302 77-465 3-335 (340)
30 2ewy_A Beta-secretase 2; BACE2 100.0 1.6E-54 5.5E-59 434.3 22.1 321 80-465 6-357 (383)
31 2qp8_A Beta-secretase 1; BACE1 100.0 4.7E-54 1.6E-58 432.4 24.8 322 79-465 13-369 (395)
32 3vf3_A Beta-secretase 1; struc 100.0 3E-53 1E-57 427.7 24.2 318 83-465 24-376 (402)
33 1t6e_X Xylanase inhibitor; two 100.0 2.1E-51 7E-56 410.8 21.9 334 78-463 4-373 (381)
34 1b5f_A Protein (cardosin A); h 100.0 1E-42 3.5E-47 325.3 14.9 217 78-355 4-237 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 2.1E-38 7.1E-43 297.0 15.8 220 204-463 1-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 3.5E-23 1.2E-27 163.6 8.7 89 78-205 4-96 (97)
37 1b5f_B Protein (cardosin A); h 99.8 8.2E-19 2.8E-23 136.2 6.8 84 374-463 2-87 (87)
38 3s8i_A Protein DDI1 homolog 1; 94.6 0.054 1.8E-06 45.3 5.8 27 435-461 108-134 (148)
39 2i1a_A DNA damage-inducible pr 93.3 0.16 5.4E-06 42.3 6.3 26 435-460 109-134 (148)
40 2i1a_A DNA damage-inducible pr 93.0 0.06 2.1E-06 45.0 3.3 33 84-118 22-54 (148)
41 3s8i_A Protein DDI1 homolog 1; 88.3 0.59 2E-05 38.9 5.1 30 87-118 23-52 (148)
42 1fmb_A EIAV protease; hydrolas 77.0 2.4 8.1E-05 32.8 3.9 27 89-117 9-35 (104)
43 2hs1_A HIV-1 protease; ultra-h 75.3 2.9 9.8E-05 32.0 3.9 27 90-118 10-36 (99)
44 3liy_A Protease; hydrolase, hy 72.4 3.2 0.00011 32.4 3.5 29 90-118 12-43 (116)
45 1lya_A Cathepsin D; lysosomal 67.4 5.2 0.00018 30.3 3.9 17 329-345 28-44 (97)
46 3ec0_A Protease; HIV-2, inhibi 66.3 5.6 0.00019 30.3 3.7 27 90-118 10-36 (99)
47 2hah_A Protease, retropepsin; 61.8 7.1 0.00024 30.7 3.7 26 90-118 16-41 (116)
48 3sqf_A Protease; folded monome 54.4 13 0.00043 29.1 3.9 27 90-118 11-37 (114)
49 1bxo_A Protein (penicillopepsi 50.0 16 0.00055 34.2 4.8 33 297-347 14-46 (323)
50 1izd_A Aspartic proteinase; su 45.9 20 0.00067 33.6 4.7 33 297-347 14-46 (323)
51 1mpp_A Pepsin; hydrolase(acid 45.8 21 0.00071 33.9 4.9 44 276-345 4-49 (361)
52 3slz_A GAG-Pro-POL polyprotein 43.6 21 0.00071 28.7 3.7 29 88-118 22-50 (132)
53 1ibq_A Aspergillopepsin; aspar 43.4 18 0.00063 33.8 4.1 33 297-347 13-45 (325)
54 3cms_A Chymosin B; hydrolase, 42.5 23 0.00079 33.0 4.6 18 329-346 29-46 (323)
55 2rsp_A RSV protease; hydrolase 37.3 25 0.00086 27.9 3.2 22 95-118 27-48 (124)
56 3ka2_A [L-Ala51;Gly51']HIV-1 p 37.2 28 0.00094 30.2 3.7 29 88-118 8-36 (203)
57 1b5f_A Protein (cardosin A); h 36.4 28 0.00094 30.9 3.9 18 329-346 28-45 (239)
58 2hs1_A HIV-1 protease; ultra-h 34.5 22 0.00075 27.0 2.4 31 299-344 5-35 (99)
59 1oew_A Endothiapepsin; hydrola 32.7 41 0.0014 31.4 4.6 16 330-345 31-46 (329)
60 1fmb_A EIAV protease; hydrolas 32.0 23 0.0008 27.1 2.2 32 300-346 6-37 (104)
61 3ec0_A Protease; HIV-2, inhibi 31.9 25 0.00085 26.7 2.3 31 299-344 5-35 (99)
62 3c9x_A Trichoderma reesei aspa 31.6 44 0.0015 31.2 4.6 18 330-347 31-48 (329)
63 1wkr_A Polyporopepsin; hydrola 31.1 42 0.0014 31.5 4.4 16 329-344 27-42 (340)
64 1j71_A Candidapepsin, aspartic 30.2 41 0.0014 31.5 4.1 17 329-345 27-43 (334)
65 2hah_A Protease, retropepsin; 29.8 29 0.001 27.1 2.4 30 299-344 11-40 (116)
66 3slz_A GAG-Pro-POL polyprotein 29.5 42 0.0014 26.9 3.4 27 304-345 24-50 (132)
67 3fv3_A SAPP1P-secreted asparti 28.9 44 0.0015 31.2 4.1 17 329-345 27-43 (339)
68 2apr_A Rhizopuspepsin; hydrola 27.9 51 0.0018 30.6 4.3 16 330-345 31-46 (325)
69 1am5_A Pepsin, acid proteinase 27.5 58 0.002 30.2 4.6 18 329-346 27-44 (324)
70 1dpj_A Proteinase A; proteinas 27.3 48 0.0016 30.9 4.0 18 329-346 28-45 (329)
71 3psg_A Pepsinogen; hydrolase(a 27.3 27 0.00092 33.4 2.3 43 279-345 45-87 (370)
72 2qzx_A Candidapepsin-5; aspart 26.5 62 0.0021 30.2 4.7 17 329-345 27-43 (342)
73 4aa9_A Chymosin; hydrolase, as 25.9 48 0.0017 30.6 3.7 18 329-346 26-43 (320)
74 1yg9_A Aspartic protease BLA G 24.4 50 0.0017 30.8 3.5 30 298-345 17-46 (330)
75 2x0b_A Renin; hydrolase-hormon 23.9 56 0.0019 31.3 3.9 19 329-347 76-94 (383)
76 3pvk_A Candidapepsin-2; hydrol 23.8 62 0.0021 30.2 4.1 17 329-345 27-43 (342)
77 3k1w_A Renin; protease, altern 23.3 72 0.0025 29.7 4.5 18 329-346 33-50 (341)
78 1htr_B Gastricsin; aspartyl pr 23.0 72 0.0025 29.6 4.4 18 329-346 27-44 (329)
79 3aup_A SBG7S, BG, basic 7S glo 22.9 67 0.0023 30.9 4.2 17 329-345 36-52 (403)
80 3vla_A EDGP; extracellular, in 22.6 50 0.0017 32.1 3.2 44 279-345 8-51 (413)
81 3qvc_A Histo-aspartic protease 22.3 74 0.0025 31.3 4.4 17 329-345 152-168 (451)
82 2bju_A Plasmepsin II; aspartic 21.5 66 0.0023 31.7 3.9 17 329-345 153-169 (453)
83 1qdm_A Prophytepsin; aspartic 21.0 69 0.0024 31.8 3.9 17 329-345 67-83 (478)
84 1tzs_A Cathepsin E; hydrolase, 21.0 58 0.002 30.7 3.2 17 329-345 38-54 (351)
85 1lya_B Cathepsin D; lysosomal 20.7 77 0.0026 27.8 3.8 32 87-118 99-137 (241)
No 1
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=9.2e-62 Score=482.86 Aligned_cols=306 Identities=24% Similarity=0.356 Sum_probs=260.6
Q ss_pred ceeeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCC
Q 012359 76 TTTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWI 155 (465)
Q Consensus 76 ~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~ 155 (465)
....||.|+.+.+|+++|+||||||+|+|+|||||+++||+|. .|..|.|+.++.|||++|+||+..+
T Consensus 45 ~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~---~C~~~~C~~~~~y~~~~SsT~~~~~--------- 112 (370)
T 3psg_A 45 IGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV---YCSSLACSDHNQFNPDDSSTFEATS--------- 112 (370)
T ss_dssp SCCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT---TCCSGGGTTSCCBCGGGCTTCEEEE---------
T ss_pred cceecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECC---CCCCcccCCCCCCCCccCcCcEECC---------
Confidence 4567899999999999999999999999999999999999999 9998777779999999999999865
Q ss_pred ccCCCCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCCcccccEEEeceecCCC------CCCccccc
Q 012359 156 HHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSSR------QPAGIAGF 229 (465)
Q Consensus 156 ~~~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~~~i~~~~fg~~~~~~~------~~~GilGL 229 (465)
| .|.+.||+|++.|.+++|+|++++..++++.|||++.... ..+|||||
T Consensus 113 ------------------------~-~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGL 167 (370)
T 3psg_A 113 ------------------------Q-ELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGL 167 (370)
T ss_dssp ------------------------E-EEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEEC
T ss_pred ------------------------c-EEEEEeCCceEEEEEEEEEEeeCCcccCCeEEEEEEeecccccccCCccceecc
Confidence 1 8999999999999999999999999999999999986532 34999999
Q ss_pred CCCCCCcc----------cc--cCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCCcc
Q 012359 230 GRGKTSLP----------SQ--LNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFS 297 (465)
Q Consensus 230 g~~~~sl~----------~q--l~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~ 297 (465)
|++.++.. +| +..++||+||.+. ...+|.|+|||+|+++ +.|++.|+|+.. .
T Consensus 168 g~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~-----~~~~G~l~fGg~D~~~-y~g~l~~~pv~~----------~ 231 (370)
T 3psg_A 168 AYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSN-----DDSGSVVLLGGIDSSY-YTGSLNWVPVSV----------E 231 (370)
T ss_dssp SCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC----------CEEEEETCCCGGG-BSSCCEEEECSE----------E
T ss_pred CCccccccCCCCHHHHHHHCCCCCCCEEEEEEccC-----CCCCeEEEEEeeChHh-cCCcceeecccc----------c
Confidence 99876532 22 4558999999874 2358999999999998 999999999987 5
Q ss_pred eeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCCCCC
Q 012359 298 VYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLR 377 (465)
Q Consensus 298 ~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 377 (465)
.+|.|.+++|+|+++.+.. .....++|||||+++++|++++++|.+++.+.. ...+.|.+
T Consensus 232 ~~w~v~l~~i~v~g~~~~~---------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-----------~~~g~~~v 291 (370)
T 3psg_A 232 GYWQITLDSITMDGETIAC---------SGGCQAIVDTGTSLLTGPTSAIANIQSDIGASE-----------NSDGEMVI 291 (370)
T ss_dssp TTEEEEECEEESSSSEEEC---------TTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE-----------CTTCCEEC
T ss_pred ceeEEEEeEEEECCEEEec---------CCCceEEEcCCCCcEECCHHHHHHHHHHhCCcc-----------cCCCcEEE
Confidence 7999999999999987652 234789999999999999999999988775432 23456789
Q ss_pred CccccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecCCCeEEEEEEecCCC--CCCCceeecccceeeeEEEEeCCCC
Q 012359 378 PCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREA--SGGPSIILGNFQMQNYYVEYDLRNQ 455 (465)
Q Consensus 378 ~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~~~~~C~~~i~~~~~--~~~~~~ILG~~fl~~~y~vfD~~~~ 455 (465)
+|+.. ..+|+|+|+| +|++|+|++++|+++ . ++.|+..+...+. ..++.||||++|||++|+|||++++
T Consensus 292 ~C~~~-----~~lP~i~f~~-~g~~~~l~~~~yi~~-~--~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~ 362 (370)
T 3psg_A 292 SCSSI-----DSLPDIVFTI-DGVQYPLSPSAYILQ-D--DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANN 362 (370)
T ss_dssp CGGGG-----GGCCCEEEEE-TTEEEEECHHHHEEE-C--SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTT
T ss_pred ECCCc-----ccCCcEEEEE-CCEEEEECHHHhccc-C--CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCC
Confidence 99876 7899999999 899999999999998 2 4579987765321 2344799999999999999999999
Q ss_pred EEEEecCC
Q 012359 456 RLGFKQQL 463 (465)
Q Consensus 456 ~iGfA~~~ 463 (465)
|||||++.
T Consensus 363 riGfA~a~ 370 (370)
T 3psg_A 363 KVGLAPVA 370 (370)
T ss_dssp EEEEEEBC
T ss_pred EEEEEEcC
Confidence 99999974
No 2
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=4.4e-61 Score=478.78 Aligned_cols=309 Identities=22% Similarity=0.395 Sum_probs=257.8
Q ss_pred ceeeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCC----CCCCCCCCCCCCCCCCCcccccCCCcc
Q 012359 76 TTTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCK----YCSSSKIPSFIPKLSSSSRLLGCQNPK 151 (465)
Q Consensus 76 ~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~----~C~~~~~~~y~p~~SsT~~~~~c~~~~ 151 (465)
....||.|+.+.+|+++|.||||||+|+|+|||||+++||+|. .|. .|.. ++.|||++|+||+..+
T Consensus 50 ~~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~---~C~~~~~~C~~--~~~y~~~~SsT~~~~~----- 119 (383)
T 2x0b_A 50 TSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS---KCSRLYTACVY--HKLFDASDSSSYKHNG----- 119 (383)
T ss_dssp -CEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT---TSCTTSHHHHT--SCCBCGGGCTTCEEEE-----
T ss_pred cceEeeeecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEecc---CCCCCcccccC--CCCCCCCCCCcEEECC-----
Confidence 3457898888899999999999999999999999999999999 996 4764 6899999999999865
Q ss_pred CCCCccCCCCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCCcccccEEEeceecCC------CCCCc
Q 012359 152 CSWIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSS------RQPAG 225 (465)
Q Consensus 152 c~~~~~~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~~~i~~~~fg~~~~~~------~~~~G 225 (465)
| .|.+.||+|++.|.+++|+|++++..++ +.|||++... ...||
T Consensus 120 ----------------------------~-~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~g~~f~~~~~dG 169 (383)
T 2x0b_A 120 ----------------------------T-ELTLRYSTGTVSGFLSQDIITVGGITVT-QMFGEVTEMPALPFMLAEFDG 169 (383)
T ss_dssp ----------------------------E-EEEEECSSCEEEEEEEEEEEEETTEEEE-EEEEEEEECCHHHHTTCSSSE
T ss_pred ----------------------------c-EEEEEcCCccEEEEEEeeEEEEcCceEE-EEEEEEEecCCcccccCCCce
Confidence 2 8999999999999999999999999999 9999998652 24599
Q ss_pred ccccCCCCCCc----------ccc--cCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCccccc
Q 012359 226 IAGFGRGKTSL----------PSQ--LNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAER 293 (465)
Q Consensus 226 ilGLg~~~~sl----------~~q--l~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~ 293 (465)
|||||++.++. .+| +..++||+||.+... .....+|+|+|||+|+++ +.|++.|+|+..
T Consensus 170 IlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~-~~~~~~G~l~fGg~d~~~-y~G~l~~~pv~~------- 240 (383)
T 2x0b_A 170 VVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSE-NSQSLGGQIVLGGSDPQH-YEGNFHYINLIK------- 240 (383)
T ss_dssp EEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC-----CCEEEEESSCCGGG-EEEEEEEEEBSS-------
T ss_pred EeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCC-cccCCCcEEEECCcChHH-cCCceEEEEcCC-------
Confidence 99999988763 244 445899999987421 111147999999999998 999999999986
Q ss_pred CCcceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccC
Q 012359 294 NAFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEAL 373 (465)
Q Consensus 294 ~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~ 373 (465)
..||.|.|++|+|+++.+.. .....+||||||+++++|++++++|.+++.+.. ..+
T Consensus 241 ---~~~w~v~l~~i~v~~~~~~~---------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~------------~~g 296 (383)
T 2x0b_A 241 ---TGVWQIQMKGVSVGSSTLLC---------EDGCLALVDTGASYISGSTSSIEKLMEALGAKK------------RLF 296 (383)
T ss_dssp ---TTSCEEEECEEEESSCCCBS---------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE------------CSS
T ss_pred ---CceEEEEEeEEEeCCceEEc---------CCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc------------cCC
Confidence 57999999999999976421 234789999999999999999999998874421 234
Q ss_pred CCCCCccccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecC-CCeEEEEEEecCCC--CCCCceeecccceeeeEEEE
Q 012359 374 TGLRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGE-GSAVCLTVVTDREA--SGGPSIILGNFQMQNYYVEY 450 (465)
Q Consensus 374 ~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~-~~~~C~~~i~~~~~--~~~~~~ILG~~fl~~~y~vf 450 (465)
.|.++|+.. ..+|+|+|+| +|++|+|++++|+++... ++..|+..+...+. ..++.||||++|||++|+||
T Consensus 297 ~~~v~C~~~-----~~~P~i~f~~-~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vf 370 (383)
T 2x0b_A 297 DYVVKCNEG-----PTLPDISFHL-GGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEF 370 (383)
T ss_dssp CEEEEGGGT-----TTCCCEEEEE-TTEEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEE
T ss_pred cEEEecccc-----ccCceEEEEE-CCEEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEE
Confidence 577899876 6899999999 899999999999987653 24689976654321 23568999999999999999
Q ss_pred eCCCCEEEEecCC
Q 012359 451 DLRNQRLGFKQQL 463 (465)
Q Consensus 451 D~~~~~iGfA~~~ 463 (465)
|++++|||||+++
T Consensus 371 D~~~~rIGfA~a~ 383 (383)
T 2x0b_A 371 DRRNNRIGFALAR 383 (383)
T ss_dssp ETTTTEEEEEEEC
T ss_pred ECCCCEEeEEEcC
Confidence 9999999999874
No 3
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.8e-59 Score=462.95 Aligned_cols=312 Identities=24% Similarity=0.382 Sum_probs=256.6
Q ss_pred ceeeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCC
Q 012359 76 TTTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWI 155 (465)
Q Consensus 76 ~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~ 155 (465)
....||.+..+..|+++|.||||+|++.|+|||||+++||+|. .|..+.|..++.|||++|+||+...
T Consensus 12 ~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~---~C~~~~C~~~~~y~~~~SsT~~~~~--------- 79 (351)
T 1tzs_A 12 SAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSV---YCTSPACKTHSRFQPSQSSTYSQPG--------- 79 (351)
T ss_dssp --CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBT---TCCSGGGTTSCCBCGGGCTTCBCCS---------
T ss_pred ccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC---CCCccccCCCCcCCcccCcceEECC---------
Confidence 3457788878899999999999999999999999999999999 9984333357899999999998754
Q ss_pred ccCCCCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCCcccccEEEeceecCCC------CCCccccc
Q 012359 156 HHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSSR------QPAGIAGF 229 (465)
Q Consensus 156 ~~~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~~~i~~~~fg~~~~~~~------~~~GilGL 229 (465)
| .|.+.||+|++.|.+++|+|+|++..++++.|||++.... ..+|||||
T Consensus 80 ------------------------~-~~~i~Yg~Gs~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGL 134 (351)
T 1tzs_A 80 ------------------------Q-SFSIQYGTGSLSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGL 134 (351)
T ss_dssp ------------------------C-EEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEEC
T ss_pred ------------------------C-EEEEEeCCCCeEEEEEEeEEEECCeEECCeEEEEEEeccccccccCCCceEEec
Confidence 2 8999999999999999999999999999999999986532 34999999
Q ss_pred CCCCCCc----------ccc--cCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCCcc
Q 012359 230 GRGKTSL----------PSQ--LNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFS 297 (465)
Q Consensus 230 g~~~~sl----------~~q--l~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~ 297 (465)
|++.++. .+| +..++||+||.+.. .....|.|+|||+|+++ +.|++.|+|+.. .
T Consensus 135 g~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~---~~~~~G~l~fGg~d~~~-~~g~l~~~p~~~----------~ 200 (351)
T 1tzs_A 135 GYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNP---EGGAGSELIFGGYDHSH-FSGSLNWVPVTK----------Q 200 (351)
T ss_dssp SCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC-----CTTCEEEETSCCGGG-BCSCCEEEECSE----------E
T ss_pred CCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCC---CCCCCCEEEECCCCHHH-cCCceEEEecCC----------C
Confidence 9987663 233 44589999998741 12247999999999998 999999999986 5
Q ss_pred eeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCCCCC
Q 012359 298 VYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLR 377 (465)
Q Consensus 298 ~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 377 (465)
.+|.|.|++|+|+++.+.. .....+||||||++++||++++++|.+++.+... . +.|.+
T Consensus 201 ~~~~v~l~~i~v~~~~~~~---------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-----------~-g~~~~ 259 (351)
T 1tzs_A 201 AYWQIALDNIQVGGTVMFC---------SEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPV-----------D-GEYAV 259 (351)
T ss_dssp TTEEEEEEEEEETTEEEEC---------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC-----------S-SSEEE
T ss_pred ceEEEEeCEEEECCceEEc---------CCCceEEeccCCcceeCCHHHHHHHHHHhCCccc-----------C-CeEEE
Confidence 7999999999999987531 2346799999999999999999999988744321 1 45778
Q ss_pred CccccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecC-CCeEEEEEEecCCC--CCCCceeecccceeeeEEEEeCCC
Q 012359 378 PCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGE-GSAVCLTVVTDREA--SGGPSIILGNFQMQNYYVEYDLRN 454 (465)
Q Consensus 378 ~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~-~~~~C~~~i~~~~~--~~~~~~ILG~~fl~~~y~vfD~~~ 454 (465)
+|+.. ..+|+|+|+| +|++|+|++++|+++... ++..|+..+...+. ...+.||||+.|||++|+|||+++
T Consensus 260 ~C~~~-----~~~P~i~f~f-~g~~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~ 333 (351)
T 1tzs_A 260 ECANL-----NVMPDVTFTI-NGVPYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGN 333 (351)
T ss_dssp CGGGG-----GGSCCEEEEE-TTEEEEECTTTSEECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTT
T ss_pred eCCCC-----ccCCcEEEEE-CCEEEEECHHHhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCC
Confidence 99876 6899999999 899999999999987643 24589987764321 134679999999999999999999
Q ss_pred CEEEEecCCCC
Q 012359 455 QRLGFKQQLCK 465 (465)
Q Consensus 455 ~~iGfA~~~C~ 465 (465)
+|||||+++|.
T Consensus 334 ~rigfA~~~~~ 344 (351)
T 1tzs_A 334 NRVGLAPAVPW 344 (351)
T ss_dssp TEEEEEEBC--
T ss_pred CEEEEEECCcc
Confidence 99999999984
No 4
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1.1e-58 Score=455.01 Aligned_cols=307 Identities=24% Similarity=0.407 Sum_probs=258.2
Q ss_pred eeeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCCc
Q 012359 77 TTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIH 156 (465)
Q Consensus 77 ~~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~~ 156 (465)
...||.+..++.|+++|.||||+|+++|+|||||+++||+|. .|..|.|..++.|||++|+||+...
T Consensus 3 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~---~C~~~~C~~~~~y~~~~SsT~~~~~---------- 69 (329)
T 1dpj_A 3 HDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSN---ECGSLACFLHSKYDHEASSSYKANG---------- 69 (329)
T ss_dssp EEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT---TCCSHHHHTSCCBCGGGCTTCEEEE----------
T ss_pred cceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecC---CCCCcccCCcCcCCcccCcCeEECC----------
Confidence 356788888899999999999999999999999999999999 9988444447899999999998754
Q ss_pred cCCCCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCCcccccEEEeceecCC------CCCCcccccC
Q 012359 157 HESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSS------RQPAGIAGFG 230 (465)
Q Consensus 157 ~~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~~~i~~~~fg~~~~~~------~~~~GilGLg 230 (465)
| .|.+.|++|++.|.+++|+|+|++..++++.|||++... ...+||||||
T Consensus 70 -----------------------~-~~~i~Yg~Gs~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg 125 (329)
T 1dpj_A 70 -----------------------T-EFAIQYGTGSLEGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLG 125 (329)
T ss_dssp -----------------------E-EEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCHHHHTTCSCSEEEECS
T ss_pred -----------------------c-EEEEEECCceEEEEEEEEEEEECCeEECCeEEEEEEecCccccccCCcceEEEeC
Confidence 2 899999999999999999999999999999999998643 2349999999
Q ss_pred CCCCCcc----------cc--cCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCCcce
Q 012359 231 RGKTSLP----------SQ--LNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSV 298 (465)
Q Consensus 231 ~~~~sl~----------~q--l~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~~ 298 (465)
++..++. +| +..++||+||.+.. .....+|.|+|||+|+++ +.|++.|+|+.. ..
T Consensus 126 ~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~--~~~~~~G~l~fGg~d~~~-~~g~l~~~p~~~----------~~ 192 (329)
T 1dpj_A 126 YDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTS--KDTENGGEATFGGIDESK-FKGDITWLPVRR----------KA 192 (329)
T ss_dssp CGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGG--GTCSSSEEEEESSCCGGG-EEEEEEEEECSS----------BT
T ss_pred CchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCC--CCCCCCcEEEEcCCChhh-cCCceEEEEcCC----------Cc
Confidence 9877643 33 45689999997642 112247999999999998 899999999976 57
Q ss_pred eEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCCCCCC
Q 012359 299 YYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLRP 378 (465)
Q Consensus 299 ~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 378 (465)
+|.|.|++|+|+++.+.. ....+||||||++++||++++++|.+++.+. . ...+.|.++
T Consensus 193 ~~~v~l~~i~v~~~~~~~----------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~-~----------~~~g~~~~~ 251 (329)
T 1dpj_A 193 YWEVKFEGIGLGDEYAEL----------ESHGAAIDTGTSLITLPSGLAEMINAEIGAK-K----------GWTGQYTLD 251 (329)
T ss_dssp TBEEEEEEEEETTEEEEC----------SSCEEEECTTCSCEEECHHHHHHHHHHHTCE-E----------CTTSSEEEC
T ss_pred eEEEEeeeEEECCeEecC----------CCccEEeeCCCCcEECCHHHHHHHHHHhCCc-c----------CCCCeEEEE
Confidence 999999999999988742 2478999999999999999999999887532 1 234566788
Q ss_pred ccccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecCCCeEEEEEEecCCC--CCCCceeecccceeeeEEEEeCCCCE
Q 012359 379 CFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREA--SGGPSIILGNFQMQNYYVEYDLRNQR 456 (465)
Q Consensus 379 C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~~~~~C~~~i~~~~~--~~~~~~ILG~~fl~~~y~vfD~~~~~ 456 (465)
|+.. ..+|+|+|+| +|.+|+|++++|+++.. ..|++.+...+. ..++.||||++|||++|+|||++++|
T Consensus 252 C~~~-----~~~P~i~f~f-~g~~~~i~~~~y~~~~~---~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~ 322 (329)
T 1dpj_A 252 CNTR-----DNLPDLIFNF-NGYNFTIGPYDYTLEVS---GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNA 322 (329)
T ss_dssp GGGG-----GGCCCEEEEE-TTEEEEECTTTSEEEET---TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTE
T ss_pred CCCC-----CcCCcEEEEE-CCEEEEECHHHhEecCC---CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCE
Confidence 9865 6899999999 89999999999999864 589977654321 23468999999999999999999999
Q ss_pred EEEecCC
Q 012359 457 LGFKQQL 463 (465)
Q Consensus 457 iGfA~~~ 463 (465)
||||+++
T Consensus 323 igfA~~~ 329 (329)
T 1dpj_A 323 VGLAKAI 329 (329)
T ss_dssp EEEEEEC
T ss_pred EEEEECC
Confidence 9999975
No 5
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=4.8e-59 Score=456.17 Aligned_cols=300 Identities=22% Similarity=0.329 Sum_probs=254.1
Q ss_pred eeeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCC--CCCCCCCCCCCCCCCCCcccccCCCccCCC
Q 012359 77 TTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCK--YCSSSKIPSFIPKLSSSSRLLGCQNPKCSW 154 (465)
Q Consensus 77 ~~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~--~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~ 154 (465)
...+|.|..++.|+++|.||||||++.|+|||||+++||+|. .|. .|. .++.|||++|+||+..+
T Consensus 4 ~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~---~C~~~~C~--~~~~y~~~~SsT~~~~~-------- 70 (323)
T 3cms_A 4 ASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSI---YCKSNACK--NHQRFDPRKSSTFQNLG-------- 70 (323)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT---TCCSHHHH--TSCCBCGGGCTTCEEEE--------
T ss_pred ceeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCC---CCCccccc--CCCCCCCccCCCeEECC--------
Confidence 356788888899999999999999999999999999999999 994 465 47899999999999865
Q ss_pred CccCCCCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCCcccccEEEeceecCCC------CCCcccc
Q 012359 155 IHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSSR------QPAGIAG 228 (465)
Q Consensus 155 ~~~~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~~~i~~~~fg~~~~~~~------~~~GilG 228 (465)
| .|.+.|++|++.|.+++|+|++++..++++.|||++.... ..+||||
T Consensus 71 -------------------------~-~~~i~Yg~Gs~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilG 124 (323)
T 3cms_A 71 -------------------------K-PLSIHYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDGILG 124 (323)
T ss_dssp -------------------------E-EEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHSSCSEEEE
T ss_pred -------------------------c-EEEEEeCCCCeEEEEEEEEEEECCeEEeccEEEEEEecccccccccCCceEEe
Confidence 2 8999999999999999999999999999999999986532 4499999
Q ss_pred cCCCCCCc----------ccc--cCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCCc
Q 012359 229 FGRGKTSL----------PSQ--LNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAF 296 (465)
Q Consensus 229 Lg~~~~sl----------~~q--l~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~ 296 (465)
||++..+. .+| +..++||+||.+.. ..|.|+|||+|+++ +.|++.|+|+..
T Consensus 125 Lg~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~------~~G~l~fGg~d~~~-~~g~l~~~p~~~---------- 187 (323)
T 3cms_A 125 MAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNG------QESMLTLGAIDPSY-YTGSLHWVPVTV---------- 187 (323)
T ss_dssp CSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTS------SCEEEEESCCCGGG-EEEEEEEEECSS----------
T ss_pred cCcchhhccCCCCHHHHHHHCCCCCCCEEEEEECCCC------CCEEEEECCCChhh-ccCceEEEECcc----------
Confidence 99987653 233 44589999998741 23999999999998 899999999986
Q ss_pred ceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCCCC
Q 012359 297 SVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGL 376 (465)
Q Consensus 297 ~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ 376 (465)
..+|.|.|++|+|+++.+.. .....++|||||++++||++++++|.+++.+.. ...+.|.
T Consensus 188 ~~~~~v~l~~i~v~~~~~~~---------~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~-----------~~~g~~~ 247 (323)
T 3cms_A 188 QQYWQFTVDSVTISGVVVAC---------EGGCQAILDTGTSKLVGPSSDILNIQQAIGATQ-----------NQYGEFD 247 (323)
T ss_dssp BTTBEEEEEEEEETTEEEES---------TTCEEEEECTTCCSEEECHHHHHHHHHHHTCEE-----------ETTTEEE
T ss_pred CCeEEEEEeeEEECCEEeec---------CCCcEEEEecCCccEeCCHHHHHHHHHHhCCee-----------cCCCcEE
Confidence 57999999999999988753 234679999999999999999999998875421 1234567
Q ss_pred CCccccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecCCCeEEEEEEecCCCCCCCceeecccceeeeEEEEeCCCCE
Q 012359 377 RPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDLRNQR 456 (465)
Q Consensus 377 ~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~~~~~C~~~i~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~ 456 (465)
++|+.. ..+|+|+|+| +|++|+|++++|+++. +..|+..+...+ .++.||||++|||++|+|||++++|
T Consensus 248 ~~C~~~-----~~~P~i~f~f-~g~~~~i~~~~y~~~~---~~~C~~~i~~~~--~~~~~iLG~~fl~~~y~vfD~~~~~ 316 (323)
T 3cms_A 248 IDCDNL-----SYMPTVVFEI-NGKMYPLTPSAYTSQD---QGFCTSGFQSEN--HSQKWILGDVFIREYYSVFDRANNL 316 (323)
T ss_dssp ECTTCT-----TTSCCEEEEE-TTEEEEECHHHHEEEE---TTEEEESEEEC-----CCEEECHHHHTTEEEEEETTTTE
T ss_pred EECCCC-----ccCceEEEEE-CCEEEEECHHHhccCC---CCEEEEEEEeCC--CCCcEEECHHHhhceEEEEECCCCE
Confidence 899876 6789999999 8999999999999982 568998776532 3457999999999999999999999
Q ss_pred EEEecCC
Q 012359 457 LGFKQQL 463 (465)
Q Consensus 457 iGfA~~~ 463 (465)
||||+++
T Consensus 317 igfA~~~ 323 (323)
T 3cms_A 317 VGLAKAI 323 (323)
T ss_dssp EEEEEEC
T ss_pred EEEEECC
Confidence 9999874
No 6
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=6.4e-59 Score=455.10 Aligned_cols=301 Identities=24% Similarity=0.338 Sum_probs=253.4
Q ss_pred eeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCCcc
Q 012359 78 TTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHH 157 (465)
Q Consensus 78 ~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~~~ 157 (465)
..||.|+.+..|+++|.||||||+++|+|||||+++||+|. .|..|.|..++.|||++|+||+..+
T Consensus 2 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~---~C~~~~C~~~~~y~~~~SsT~~~~~----------- 67 (320)
T 4aa9_A 2 REPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSI---YCKSNVCKNHHRFDPRKSSTFRNLG----------- 67 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBT---TCCSHHHHTSCCBCGGGCTTCEEEE-----------
T ss_pred CccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCC---CCCccccCCCCCCCCCCCcCeEcCC-----------
Confidence 35788888899999999999999999999999999999999 9987555568999999999999875
Q ss_pred CCCCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCCcccccEEEeceecCCC------CCCcccccCC
Q 012359 158 ESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSSR------QPAGIAGFGR 231 (465)
Q Consensus 158 ~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~~~i~~~~fg~~~~~~~------~~~GilGLg~ 231 (465)
| .|.+.|++|++.|.+++|+|+|++..++++.|||++.... ..+||||||+
T Consensus 68 ----------------------~-~~~i~Yg~gs~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 124 (320)
T 4aa9_A 68 ----------------------K-PLSIHYGTGSMEGFLGYDTVTVSNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAY 124 (320)
T ss_dssp ----------------------E-EEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSC
T ss_pred ----------------------c-EEEEEECCcEEEEEEEEEEEEECCEeecCeEEEEEEEcccccccccCcccEEecCc
Confidence 1 8999999999999999999999999999999999986543 3499999998
Q ss_pred CCCCc------c----cc--cCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCCccee
Q 012359 232 GKTSL------P----SQ--LNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSVY 299 (465)
Q Consensus 232 ~~~sl------~----~q--l~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~~~ 299 (465)
+..+. + +| +..++||+||.+. ...|.|+|||+|+++ +.|++.|+|+.. ..+
T Consensus 125 ~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~------~~~G~l~fGg~d~~~-~~g~l~~~p~~~----------~~~ 187 (320)
T 4aa9_A 125 PSLASEYSVPVFDNMMDRHLVARDLFSVYMDRN------GQGSMLTLGAIDPSY-YTGSLHWVPVTL----------QQY 187 (320)
T ss_dssp GGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSS------SSCCEEEETCCCGGG-EEEEEEEEECSS----------BTT
T ss_pred ccccccCCCCHHHHHHhCCCCCCceEEEEeCCC------CCCeEEEEcccCHHH-ccCceEEEEccc----------CCc
Confidence 76543 2 22 4458999999873 358999999999998 999999999976 579
Q ss_pred EEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCCCCCCc
Q 012359 300 YYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLRPC 379 (465)
Q Consensus 300 w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~C 379 (465)
|.|.+++|+|+++.+.. .....++|||||++++||++++++|++++.+.. ...+.|.++|
T Consensus 188 w~v~l~~i~v~~~~~~~---------~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~-----------~~~g~~~~~C 247 (320)
T 4aa9_A 188 WQFTVDSVTINGVAVAC---------VGGCQAILDTGTSVLFGPSSDILKIQMAIGATE-----------NRYGEFDVNC 247 (320)
T ss_dssp BEEEECEEEETTEEEES---------TTCEEEEECTTCSSEEEEHHHHHHHHHHTTCEE-----------CTTSCEEECG
T ss_pred eEEEEeEEEECCEEecc---------CCCcEEEEECCCCcEECCHHHHHHHHHHhCCcc-----------cCCCcEEEeC
Confidence 99999999999988753 234679999999999999999999998874431 1345678899
Q ss_pred cccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecCCCeEEEEEEecCCCCCCCceeecccceeeeEEEEeCCCCEEEE
Q 012359 380 FDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDLRNQRLGF 459 (465)
Q Consensus 380 ~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~~~~~C~~~i~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGf 459 (465)
+.. ..+|+|+|+| +|++|+|++++|+.+. +..|+..+... ..++.||||++|||++|+|||++++||||
T Consensus 248 ~~~-----~~~p~i~f~f-~g~~~~l~~~~y~~~~---~~~C~~~i~~~--~~~~~~ilG~~fl~~~y~vfD~~~~~igf 316 (320)
T 4aa9_A 248 GNL-----RSMPTVVFEI-NGRDYPLSPSAYTSKD---QGFCTSGFQGD--NNSELWILGDVFIREYYSVFDRANNRVGL 316 (320)
T ss_dssp GGG-----GGCCCEEEEE-TTEEEEECHHHHEEEE---TTEEEESEEEE--TTCCCEEECHHHHTTEEEEEETTTTEEEE
T ss_pred CCC-----CcCceEEEEE-CCEEEEECHHHhccCC---CCeEEEEEEcC--CCCCcEEEChHHhcceEEEEECCCCEEEE
Confidence 876 6899999999 8999999999999873 56899876652 23457999999999999999999999999
Q ss_pred ecCC
Q 012359 460 KQQL 463 (465)
Q Consensus 460 A~~~ 463 (465)
|+++
T Consensus 317 A~a~ 320 (320)
T 4aa9_A 317 AKAI 320 (320)
T ss_dssp EEEC
T ss_pred EecC
Confidence 9975
No 7
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=2.7e-58 Score=457.87 Aligned_cols=311 Identities=19% Similarity=0.338 Sum_probs=261.9
Q ss_pred ceeeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCC---CCCCCCCCCCCCCCCCCcccccCCCccC
Q 012359 76 TTTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCK---YCSSSKIPSFIPKLSSSSRLLGCQNPKC 152 (465)
Q Consensus 76 ~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~---~C~~~~~~~y~p~~SsT~~~~~c~~~~c 152 (465)
....||.+..++.|+++|.||||+|++.|+|||||+++||+|. .|. .|.. ++.|||++|+||+...
T Consensus 7 ~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~---~C~~~~~C~~--~~~y~~~~SsT~~~~~------ 75 (361)
T 1mpp_A 7 VDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHK---GCDNSEGCVG--KRFFDPSSSSTFKETD------ 75 (361)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT---TCCGGGTCCS--SCCBCGGGCTTCEEEE------
T ss_pred cceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCC---CCCCCccCCC--CCcCCCccCCceEecC------
Confidence 4457888888899999999999999999999999999999999 998 5754 7899999999999865
Q ss_pred CCCccCCCCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCCcccccEEEeceecCCC-----------
Q 012359 153 SWIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSSR----------- 221 (465)
Q Consensus 153 ~~~~~~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~~~i~~~~fg~~~~~~~----------- 221 (465)
| .|.+.|++|++.|.+++|+|+|++..++++.|||++....
T Consensus 76 ---------------------------~-~~~i~Yg~Gs~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~~~ 127 (361)
T 1mpp_A 76 ---------------------------Y-NLNITYGTGGANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSEL 127 (361)
T ss_dssp ---------------------------E-EEEEECSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSS
T ss_pred ---------------------------C-eEEEEECCceEEEEEEEEEEEECCEEEeceEEEEEEeccCccccccccccC
Confidence 2 8999999999999999999999999999999999985422
Q ss_pred CCCcccccCCCCCCcc----------------cc--cCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeec
Q 012359 222 QPAGIAGFGRGKTSLP----------------SQ--LNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTP 283 (465)
Q Consensus 222 ~~~GilGLg~~~~sl~----------------~q--l~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p 283 (465)
..+||||||++..+.. +| +..++||+||.+. ...|.|+|||+|+++ +.|++.|+|
T Consensus 128 ~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~------~~~G~l~fGg~d~~~-~~g~l~~~p 200 (361)
T 1mpp_A 128 FLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN------DGGGQVVFGGVNNTL-LGGDIQYTD 200 (361)
T ss_dssp CCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCS------SSEEEEEESSCCGGG-BSSCCEEEE
T ss_pred CCCCEEEeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCC------CCCcEEEEecCChhh-cCCceEEEE
Confidence 3499999999866543 23 4458999999863 358999999999998 999999999
Q ss_pred cccCCcccccCCcceeEEEEeeEEEECCEEEEeeccceecccCCCCceE-EccccceeecChhhhHHHHHHHHHHhhccc
Q 012359 284 FVNNPSVAERNAFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTI-VDSGTTFTFMAPELFEPLADEFVSQMVKNR 362 (465)
Q Consensus 284 ~~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~i-iDSGt~~~~lp~~~~~~i~~~l~~~~~~~~ 362 (465)
+...... ..+|.|.|++|+|+++.+..+ ....+| |||||++++||++++++|++++.+...
T Consensus 201 ~~~~~~~------~~~~~v~l~~i~v~~~~~~~~---------~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~--- 262 (361)
T 1mpp_A 201 VLKSRGG------YFFWDAPVTGVKIDGSDAVSF---------DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT--- 262 (361)
T ss_dssp CEEETTE------EEEEEEEEEEEEETTEEEEEE---------EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE---
T ss_pred cccCCCc------eeEEEEEEeEEEECCeeeccC---------CCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc---
Confidence 9874321 239999999999999886432 125699 999999999999999999998865432
Q ss_pred ccccccccccCCCCCCccccCCCCCccC-CeEEEEEc-C-----CcEEEecCCCeEEEecCCCeEEEEEEecCCCCCCCc
Q 012359 363 NYTRALGAEALTGLRPCFDVPGEKTGSF-PELKLHFK-G-----GAEVTLPVENYFAVVGEGSAVCLTVVTDREASGGPS 435 (465)
Q Consensus 363 ~~~~~~~~~~~~~~~~C~~~~~~~~~~~-p~i~f~f~-g-----g~~~~l~~~~yi~~~~~~~~~C~~~i~~~~~~~~~~ 435 (465)
...+.|.++|+.. ..+ |.|+|+|. + |++|+|++++|+++...++..|+..+... .++.
T Consensus 263 -------~~~g~~~~~C~~~-----~~~~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~---~~~~ 327 (361)
T 1mpp_A 263 -------ESQQGYTVPCSKY-----QDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPD---GGNQ 327 (361)
T ss_dssp -------EETTEEEEEHHHH-----TTCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEE---SSSC
T ss_pred -------CCCCcEEEECCCc-----ccCCCcEEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeC---CCCC
Confidence 2234577899876 577 99999994 4 89999999999998754456899766643 3357
Q ss_pred eeecccceeeeEEEEeCCCCEEEEecCCCC
Q 012359 436 IILGNFQMQNYYVEYDLRNQRLGFKQQLCK 465 (465)
Q Consensus 436 ~ILG~~fl~~~y~vfD~~~~~iGfA~~~C~ 465 (465)
||||++|||++|+|||++++|||||+++|+
T Consensus 328 ~iLG~~fl~~~yvvfD~~~~~igfa~~~~~ 357 (361)
T 1mpp_A 328 FIVGNLFLRFFVNVYDFGKNRIGFAPLASG 357 (361)
T ss_dssp CEEEHHHHTTEEEEEETTTTEEEEEEBCTT
T ss_pred EEEChHHhccEEEEEECCCCEEEEEEcccC
Confidence 999999999999999999999999999995
No 8
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=2.4e-58 Score=451.53 Aligned_cols=302 Identities=26% Similarity=0.403 Sum_probs=255.4
Q ss_pred eeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCCcc
Q 012359 78 TTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHH 157 (465)
Q Consensus 78 ~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~~~ 157 (465)
..||.+..++.|+++|.||||||++.|+|||||+++||+|. .|..+.|..++.|||++|+||+...
T Consensus 3 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~---~C~~~~C~~~~~y~~~~SsT~~~~~----------- 68 (324)
T 1am5_A 3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSS---HCSAQACSNHNKFKPRQSSTYVETG----------- 68 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBT---TCCSHHHHTSCCBCGGGCTTCEEEE-----------
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC---CCCcccccCCCcCCCccCCCeEeCC-----------
Confidence 46788888899999999999999999999999999999999 9985222347899999999999865
Q ss_pred CCCCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCCcccccEEEeceecCC------CCCCcccccCC
Q 012359 158 ESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSS------RQPAGIAGFGR 231 (465)
Q Consensus 158 ~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~~~i~~~~fg~~~~~~------~~~~GilGLg~ 231 (465)
| .|.+.|++|++.|.+++|+|++++..++++.|||++... ...+||||||+
T Consensus 69 ----------------------~-~~~i~Yg~Gs~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 125 (324)
T 1am5_A 69 ----------------------K-TVDLTYGTGGMRGILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAY 125 (324)
T ss_dssp ----------------------E-EEEEECSSCEEEEEEEEEEEESSSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSC
T ss_pred ----------------------c-EEEEEECCCCeEEEEEECceeECCcEEcccEEEEEEecccccccCCCCceEEecCC
Confidence 2 899999999999999999999999999999999998643 23499999999
Q ss_pred CCCCcc----------cc--cCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCCccee
Q 012359 232 GKTSLP----------SQ--LNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSVY 299 (465)
Q Consensus 232 ~~~sl~----------~q--l~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~~~ 299 (465)
+..+.. +| +..++||+||.+. ....|.|+|||+|+++ +.|++.|+|+.. ..+
T Consensus 126 ~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~-----~~~~G~l~fGg~d~~~-~~g~l~~~p~~~----------~~~ 189 (324)
T 1am5_A 126 PSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGG-----GANGSEVMLGGVDNSH-YTGSIHWIPVTA----------EKY 189 (324)
T ss_dssp GGGCGGGCCCHHHHHHHTTCSSSSEEEEECCST-----TCSCEEEEESSCCGGG-BCSCCEEEEEEE----------ETT
T ss_pred ccccccCCCchHHhHHhcCCCCCCEEEEEecCC-----CCCCcEEEECccCHHH-cCCceEEEecCC----------CcE
Confidence 876643 22 4458999999874 1248999999999998 999999999986 579
Q ss_pred EEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCCCCCCc
Q 012359 300 YYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLRPC 379 (465)
Q Consensus 300 w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~C 379 (465)
|.|.+++|+|+++.+.. .+ ..++|||||++++||++++++|.+++.+. . ..+.|.++|
T Consensus 190 ~~v~l~~i~v~~~~~~~---------~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~-----------~~g~~~~~C 247 (324)
T 1am5_A 190 WQVALDGITVNGQTAAC---------EG-CQAIVDTGTSKIVAPVSALANIMKDIGAS-E-----------NQGEMMGNC 247 (324)
T ss_dssp EEEEECEEEETTEECCC---------CC-EEEEECTTCSSEEECTTTHHHHHHHHTCE-E-----------CCCCEECCT
T ss_pred EEEEEeEEEECCceeec---------cC-ceEEEecCCccEECCHHHHHHHHHHhCCc-c-----------cCCcEEEeC
Confidence 99999999999987531 22 67999999999999999999999887543 2 234567899
Q ss_pred cccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecCCCeEEEEEEecCCC--CCCCceeecccceeeeEEEEeCCCCEE
Q 012359 380 FDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREA--SGGPSIILGNFQMQNYYVEYDLRNQRL 457 (465)
Q Consensus 380 ~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~~~~~C~~~i~~~~~--~~~~~~ILG~~fl~~~y~vfD~~~~~i 457 (465)
+.. ..+|+|+|+| +|++|+|++++|+++. +..|+..+...+. ..++.||||++|||++|+|||++++||
T Consensus 248 ~~~-----~~~P~i~f~f-~g~~~~i~~~~y~~~~---~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~i 318 (324)
T 1am5_A 248 ASV-----QSLPDITFTI-NGVKQPLPPSAYIEGD---QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKV 318 (324)
T ss_dssp TSS-----SSSCCEEEEE-TTEEEEECHHHHEEES---SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEE
T ss_pred CCc-----ccCCcEEEEE-CCEEEEECHHHhcccC---CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEE
Confidence 865 6899999999 8999999999999986 4589987765321 134689999999999999999999999
Q ss_pred EEecCC
Q 012359 458 GFKQQL 463 (465)
Q Consensus 458 GfA~~~ 463 (465)
|||+++
T Consensus 319 gfa~a~ 324 (324)
T 1am5_A 319 GFAPAA 324 (324)
T ss_dssp EEEEBC
T ss_pred EEEECC
Confidence 999975
No 9
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1e-57 Score=454.63 Aligned_cols=303 Identities=21% Similarity=0.304 Sum_probs=256.4
Q ss_pred ceeeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCC
Q 012359 76 TTTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWI 155 (465)
Q Consensus 76 ~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~ 155 (465)
....||.+..++.|+++|.||||||++.|+|||||+++||+|. .|..+.|..++.|||++|+||+..+
T Consensus 51 ~~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~---~C~~~~C~~~~~y~~~~SsT~~~~~--------- 118 (375)
T 1miq_A 51 NDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSK---KCNSSGCSIKNLYDSSKSKSYEKDG--------- 118 (375)
T ss_dssp TBCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBT---TCCSSGGGGSCCBCGGGCTTCEEEE---------
T ss_pred cceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccC---CCCcccccCCCcCCCccCCceEECC---------
Confidence 4557888888899999999999999999999999999999999 9975444458899999999998865
Q ss_pred ccCCCCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCCcccccEEEeceec----CC----CCCCccc
Q 012359 156 HHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVL----SS----RQPAGIA 227 (465)
Q Consensus 156 ~~~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~~~i~~~~fg~~~~----~~----~~~~Gil 227 (465)
| .|.+.||+|++.|.+++|+|++++..+++ .|||++. .. ...+|||
T Consensus 119 ------------------------~-~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~-~Fg~~~~~~~~~~~f~~~~~dGil 172 (375)
T 1miq_A 119 ------------------------T-KVDITYGSGTVKGFFSKDLVTLGHLSMPY-KFIEVTDTDDLEPIYSSVEFDGIL 172 (375)
T ss_dssp ------------------------E-EEEEEETTEEEEEEEEEEEEEETTEEEEE-EEEEEEECGGGTTHHHHSCCCEEE
T ss_pred ------------------------c-EEEEEeCCCeEEEEEEEEEEEEcCceECc-EEEEEEeccccccccccCCCceEE
Confidence 2 89999999999999999999999999999 9999987 32 3449999
Q ss_pred ccCCCCCCcc----------cc--cCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCC
Q 012359 228 GFGRGKTSLP----------SQ--LNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNA 295 (465)
Q Consensus 228 GLg~~~~sl~----------~q--l~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~ 295 (465)
|||++..+.. +| +..++||+||.+. ...+|.|+|||+|+++ +.|++.|+|+..
T Consensus 173 GLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~-----~~~~G~l~fGg~d~~~-~~g~l~~~p~~~--------- 237 (375)
T 1miq_A 173 GLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVH-----DVHAGYLTIGGIEEKF-YEGNITYEKLNH--------- 237 (375)
T ss_dssp ECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTT-----CTTEEEEEESSCCGGG-EEEEEEEEEBSS---------
T ss_pred eCCCCcccccCCCCHHHHHHhccCcCCCEEEEEecCC-----CCCCeEEEEcccCHHH-cCCceEEEecCC---------
Confidence 9999887643 33 4458999999874 1268999999999998 899999999976
Q ss_pred cceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCCC
Q 012359 296 FSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTG 375 (465)
Q Consensus 296 ~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 375 (465)
..+|.|.++ |+|+++.+ . ...+||||||++++||++++++|.+++.+... ...+.|
T Consensus 238 -~~~w~v~l~-i~v~g~~~-~-----------~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~----------~~~g~~ 293 (375)
T 1miq_A 238 -DLYWQIDLD-VHFGKQTM-E-----------KANVIVDSGTTTITAPSEFLNKFFANLNVIKV----------PFLPFY 293 (375)
T ss_dssp -SSSSEEEEE-EEETTEEE-E-----------EEEEEECTTBSSEEECHHHHHHHHHHHTCEEC----------TTSSCE
T ss_pred -CceEEEEEE-EEECCEEc-c-----------cceEEecCCCccEEcCHHHHHHHHHHhCCccc----------CCCCeE
Confidence 579999999 99999876 1 25699999999999999999999998855322 234457
Q ss_pred CCCccccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecC-CCeEEEEEEecCCCCCCCceeecccceeeeEEEEeCCC
Q 012359 376 LRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGE-GSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDLRN 454 (465)
Q Consensus 376 ~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~-~~~~C~~~i~~~~~~~~~~~ILG~~fl~~~y~vfD~~~ 454 (465)
.++|+. ..+|+|+|+| +|++|+|++++|+++... +...|+..+...+. ..+.||||++|||++|+|||+++
T Consensus 294 ~~~C~~------~~~P~i~f~f-~g~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~-~~~~~ILG~~fl~~~yvvfD~~~ 365 (375)
T 1miq_A 294 VTTCDN------KEMPTLEFKS-ANNTYTLEPEYYMNPILEVDDTLCMITMLPVDI-DSNTFILGDPFMRKYFTVFDYDK 365 (375)
T ss_dssp EEETTC------TTCCCEEEEC-SSCEEEECGGGSEEESSSSSCSEEEESEEECCS-SSSEEEECHHHHHHEEEEEETTT
T ss_pred EEECCC------CCCCcEEEEE-CCEEEEECHHHhEeeccCCCCCeEEEEEEECCC-CCCcEEECHHHhccEEEEEECCC
Confidence 789974 3689999999 899999999999998753 35689977765431 12689999999999999999999
Q ss_pred CEEEEecCC
Q 012359 455 QRLGFKQQL 463 (465)
Q Consensus 455 ~~iGfA~~~ 463 (465)
+|||||+++
T Consensus 366 ~riGfA~~~ 374 (375)
T 1miq_A 366 ESVGFAIAK 374 (375)
T ss_dssp TEEEEEEEC
T ss_pred CEEEEEEcC
Confidence 999999874
No 10
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.4e-57 Score=458.31 Aligned_cols=355 Identities=25% Similarity=0.496 Sum_probs=276.3
Q ss_pred cceeeeccc-CCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCC
Q 012359 75 TTTTTNISS-HSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCS 153 (465)
Q Consensus 75 ~~~~~~l~~-~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~ 153 (465)
+....|+.. ..+++|+++|.||||||+|.|+|||||+++||+|. +| .+|+||+.+.|.++.|.
T Consensus 7 ~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~---~c-------------~~Sst~~~v~C~s~~C~ 70 (413)
T 3vla_A 7 SALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD---QN-------------YVSSTYRPVRCRTSQCS 70 (413)
T ss_dssp SEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS---SS-------------CCCTTCEECBTTSHHHH
T ss_pred ccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC---CC-------------CCCCCcCccCCCccccc
Confidence 345566653 34689999999999999999999999999999998 66 26999999999999998
Q ss_pred CCccCCCCCCCCCCCCccCCCCCc-cCCCceeEecC-Cc-eEEEeEEEEEEEcC---------CcccccEEEeceecCC-
Q 012359 154 WIHHESIQCRDCNDEPLATSKNCT-QICPSYLVLYG-SG-LTEGIALSETLNLP---------NRIIPNFLVGCSVLSS- 220 (465)
Q Consensus 154 ~~~~~~~~c~~c~~~~~~~~~~c~-~~C~~~~~~Yg-~g-~~~G~~~~D~v~~~---------~~~i~~~~fg~~~~~~- 220 (465)
.... ..|..|...+ ...|. +.| .|.+.|+ +| ++.|.+++|+|+|+ +..++++.|||++...
T Consensus 71 ~~~~--~~~~~c~s~~---~~~c~~~~c-~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~ 144 (413)
T 3vla_A 71 LSGS--IACGDCFNGP---RPGCNNNTC-GVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLL 144 (413)
T ss_dssp HTTC--CEEECCSSCC---BTTBCSSEE-EECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGG
T ss_pred cccc--CCCcccccCC---CCCCCCCcC-cceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccc
Confidence 7543 2455443210 12343 457 9999995 65 48999999999996 2578899999998641
Q ss_pred ----CCCCcccccCCCCCCcccccCC-----CeeeeecCCCCCCCCCCccceEEecCCCCCC----cCCCC-eeeecccc
Q 012359 221 ----RQPAGIAGFGRGKTSLPSQLNL-----DKFSYCLLSHKFDDTTRTSSLILDNGSSHSD----KKTTG-LTYTPFVN 286 (465)
Q Consensus 221 ----~~~~GilGLg~~~~sl~~ql~~-----~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~----~~~g~-l~~~p~~~ 286 (465)
...+||||||++.+|++.||.. ++||+||.+. ...+|.|+|||.|..+ .+.++ +.|+|++.
T Consensus 145 ~g~~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~-----~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~ 219 (413)
T 3vla_A 145 QNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGS-----TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLT 219 (413)
T ss_dssp TTSCTTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSC-----SSSCEEEEEESCCEEETTTEEECTTTSEEEECBC
T ss_pred cCcccccccccccCCCCcchHHHHhhhcCCCceEEEeCCCC-----CCCceEEEECCCcccccccccccCCceeEeeccc
Confidence 2349999999999999999764 8999999873 2357999999998642 15778 99999998
Q ss_pred CCccc----ccCCcceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhccc
Q 012359 287 NPSVA----ERNAFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNR 362 (465)
Q Consensus 287 ~~~~~----~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~ 362 (465)
++... .+.....||.|+|++|+||++.+.++...+..+..+...+||||||++++||+++|++|.++|.+.+.. +
T Consensus 220 ~~~~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~-~ 298 (413)
T 3vla_A 220 NPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAA-R 298 (413)
T ss_dssp CSSCCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHH-T
T ss_pred CCccccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcc-c
Confidence 64210 000012699999999999999999888877766556688999999999999999999999999987641 1
Q ss_pred ccccccccccCCCCCCccccCCCC----CccCCeEEEEEcC-CcEEEecCCCeEEEecCCCeEEEEEEecCCCCCCCcee
Q 012359 363 NYTRALGAEALTGLRPCFDVPGEK----TGSFPELKLHFKG-GAEVTLPVENYFAVVGEGSAVCLTVVTDREASGGPSII 437 (465)
Q Consensus 363 ~~~~~~~~~~~~~~~~C~~~~~~~----~~~~p~i~f~f~g-g~~~~l~~~~yi~~~~~~~~~C~~~i~~~~~~~~~~~I 437 (465)
++++. ....++..|+..++.. ...+|+|+|+|.| ++.|+|++++|+++... +..|++++.... ..++.||
T Consensus 299 ~~~~~---~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~-~~~Cl~~~~~~~-~~~~~~I 373 (413)
T 3vla_A 299 NITRV---ASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND-NVVCLGVVDGGS-NLRTSIV 373 (413)
T ss_dssp TCCEE---CCCTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET-TEEEECEEEEES-SCSSSEE
T ss_pred CCCcC---CCCCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC-CcEEEEEEecCC-Cccccee
Confidence 22221 1234568999875432 1478999999944 38999999999998764 678997665432 2346799
Q ss_pred ecccceeeeEEEEeCCCCEEEEecC
Q 012359 438 LGNFQMQNYYVEYDLRNQRLGFKQQ 462 (465)
Q Consensus 438 LG~~fl~~~y~vfD~~~~~iGfA~~ 462 (465)
||+.|||++|+|||++++|||||++
T Consensus 374 lGd~fl~~~~vvfD~~~~riGfa~~ 398 (413)
T 3vla_A 374 IGGHQLEDNLVQFDLATSRVGFSGT 398 (413)
T ss_dssp ECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred EehhhhcCeEEEEECCCCEEEEEEe
Confidence 9999999999999999999999985
No 11
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.5e-57 Score=465.22 Aligned_cols=321 Identities=24% Similarity=0.393 Sum_probs=258.3
Q ss_pred ceeeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCC---CCCCCCCCCCCCCCCCCcccccCCCccC
Q 012359 76 TTTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCK---YCSSSKIPSFIPKLSSSSRLLGCQNPKC 152 (465)
Q Consensus 76 ~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~---~C~~~~~~~y~p~~SsT~~~~~c~~~~c 152 (465)
....+|.++.++.|+++|.||||||+|.|+|||||+++||+|. .|. .|.. ++.|||++|+||+..+
T Consensus 41 ~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~---~C~~~~~C~~--~~~y~~~~SsT~~~~~------ 109 (478)
T 1qdm_A 41 GDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSA---KCYFSIACYL--HSRYKAGASSTYKKNG------ 109 (478)
T ss_dssp SCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBT---TCCSCGGGGG--SCCBCGGGCTTCBCCC------
T ss_pred CceEEeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecC---CCCCCccccC--CCCCCcccCCCeeeCC------
Confidence 3457888888899999999999999999999999999999999 896 4764 6899999999998754
Q ss_pred CCCccCCCCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCCcccccEEEeceecCCC------CCCcc
Q 012359 153 SWIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSSR------QPAGI 226 (465)
Q Consensus 153 ~~~~~~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~~~i~~~~fg~~~~~~~------~~~Gi 226 (465)
| .|.+.||+|++.|.+++|+|++++..++++.||+++.... ..+||
T Consensus 110 ---------------------------~-~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~f~~~~~dGI 161 (478)
T 1qdm_A 110 ---------------------------K-PAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDGI 161 (478)
T ss_dssp ---------------------------C-EEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCBSHHHHCSSSEE
T ss_pred ---------------------------c-EEEEEcCCCCeEEEEEEEEEEECCeEECCEEEEEEEecCCcccccccccce
Confidence 1 8999999999999999999999999999999999986432 34999
Q ss_pred cccCCCCCCc----------ccc--cCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccC
Q 012359 227 AGFGRGKTSL----------PSQ--LNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERN 294 (465)
Q Consensus 227 lGLg~~~~sl----------~~q--l~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~ 294 (465)
||||++.+++ .+| +..++||+||.+. .....+|.|+|||+|+++ +.|++.|+|+..
T Consensus 162 lGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~---~~~~~~G~l~fGg~d~~~-~~G~l~~~pv~~-------- 229 (478)
T 1qdm_A 162 LGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRH---VDEGEGGEIIFGGMDPKH-YVGEHTYVPVTQ-------- 229 (478)
T ss_dssp EECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC--------CEEEEETCCCTTS-EEEEEEEEEEEE--------
T ss_pred ecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecC---CCCCCCeEEEeCCcCHhh-cCCCceEEeccC--------
Confidence 9999988763 233 3458999999874 123358999999999998 999999999976
Q ss_pred CcceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHh----------------
Q 012359 295 AFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQM---------------- 358 (465)
Q Consensus 295 ~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~---------------- 358 (465)
.+||.|.|++|.|+++.+.++ .....+||||||+++++|++++++|.+++.+..
T Consensus 230 --~~~w~v~l~~i~v~g~~~~~~--------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ 299 (478)
T 1qdm_A 230 --KGYWQFDMGDVLVGGKSTGFC--------AGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQ 299 (478)
T ss_dssp --ETTEEEEECCEEETTEECSTT--------TTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHH
T ss_pred --CCeEEEEEeEEEECCEEEeec--------CCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhH
Confidence 579999999999999876432 234679999999999999999999998885421
Q ss_pred ------h-----------------cccc----c----c------------------------------------------
Q 012359 359 ------V-----------------KNRN----Y----T------------------------------------------ 365 (465)
Q Consensus 359 ------~-----------------~~~~----~----~------------------------------------------ 365 (465)
. ..|. . .
T Consensus 300 ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~ 379 (478)
T 1qdm_A 300 ILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYV 379 (478)
T ss_dssp HHHHHHTTCCHHHHHHHTTCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHhhhhccChhhhhccccccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHH
Confidence 0 0000 0 0
Q ss_pred -c---ccccccCCCCCCccccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecCC-CeEEEEEEecCC--CCCCCceee
Q 012359 366 -R---ALGAEALTGLRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEG-SAVCLTVVTDRE--ASGGPSIIL 438 (465)
Q Consensus 366 -~---~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~~-~~~C~~~i~~~~--~~~~~~~IL 438 (465)
. ......+.|.++|... ..+|+|+|+| ||+.|+|+|++|+++...+ ...|++.+...+ ...++.|||
T Consensus 380 ~~~C~~~~~~~g~~~v~C~~~-----~~lP~i~f~~-gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~IL 453 (478)
T 1qdm_A 380 NQLCNRLPSPMGESAVDCGSL-----GSMPDIEFTI-GGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWIL 453 (478)
T ss_dssp HHHTTCBCCSSSCCEECGGGG-----TTCCCEEEEE-TTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEE
T ss_pred HHHhhccCCCCCeEEeecccc-----cccccEEEEE-CCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEE
Confidence 0 0001235677889766 6899999999 8999999999999987652 458998776432 123568999
Q ss_pred cccceeeeEEEEeCCCCEEEEecCC
Q 012359 439 GNFQMQNYYVEYDLRNQRLGFKQQL 463 (465)
Q Consensus 439 G~~fl~~~y~vfD~~~~~iGfA~~~ 463 (465)
|+.|||++|+|||++++|||||++.
T Consensus 454 Gd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 454 GDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp CHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CHHHhccEEEEEECCCCEEEEEeCC
Confidence 9999999999999999999999863
No 12
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.7e-57 Score=458.22 Aligned_cols=344 Identities=20% Similarity=0.359 Sum_probs=261.4
Q ss_pred cceeeecc-cCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCC
Q 012359 75 TTTTTNIS-SHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCS 153 (465)
Q Consensus 75 ~~~~~~l~-~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~ 153 (465)
.....||. +..++.|+++|.||||||++.|+|||||+++||+|. +| .+|+||+.+.|.+..|.
T Consensus 8 ~~~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~---~~-------------~~Sst~~~~~C~s~~C~ 71 (403)
T 3aup_A 8 NLVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE---QQ-------------YSSKTYQAPFCHSTQCS 71 (403)
T ss_dssp CCEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS---SC-------------CCCSSCBCCCTTBHHHH
T ss_pred ccEEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCC---CC-------------CCCCCCCccCCCCcccc
Confidence 34567888 777899999999999999999999999999999998 54 36999999999999998
Q ss_pred CCccCCCCCCCCCCCCccCCCCCc-cCCCceeEecC-Cce-EEEeEEEEEEEcCC-----------cccccEEEeceecC
Q 012359 154 WIHHESIQCRDCNDEPLATSKNCT-QICPSYLVLYG-SGL-TEGIALSETLNLPN-----------RIIPNFLVGCSVLS 219 (465)
Q Consensus 154 ~~~~~~~~c~~c~~~~~~~~~~c~-~~C~~~~~~Yg-~g~-~~G~~~~D~v~~~~-----------~~i~~~~fg~~~~~ 219 (465)
..... .|..|..+. ...|. ..| .|.+.|+ +|+ +.|.+++|+|+|++ ..++++.|||++..
T Consensus 72 ~~~~~--~c~~c~~~~---~s~~~~~~~-~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~ 145 (403)
T 3aup_A 72 RANTH--QCLSCPAAS---RPGCHKNTC-GLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSF 145 (403)
T ss_dssp HTTCC--CEEECSSSC---BTTBCSSEE-EEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGG
T ss_pred Ccccc--CccccCCCC---CCCCCCCcc-eeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCccc
Confidence 75432 344443211 12243 467 9999998 554 99999999999987 78999999999864
Q ss_pred C------CCCCcccccCCCCCCcccccCC-----CeeeeecCCCCCCCCCCccceEEecCCCCCCcC--C-C-----Cee
Q 012359 220 S------RQPAGIAGFGRGKTSLPSQLNL-----DKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKK--T-T-----GLT 280 (465)
Q Consensus 220 ~------~~~~GilGLg~~~~sl~~ql~~-----~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~--~-g-----~l~ 280 (465)
. ...+||||||++.++++.|++. ++||+||.+. ....|.|+||| |+++ + . | ++.
T Consensus 146 ~~~~~~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~-----~~~~G~l~fGg-d~~~-~~~~~G~~~~~~l~ 218 (403)
T 3aup_A 146 LVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRY-----PTSKGAIIFGD-APNN-MRQFQNQDIFHDLA 218 (403)
T ss_dssp GGSSSSSTTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSC-----TTSCEEEEESC-HHHH-C--CTTCCTTTTEE
T ss_pred ccccCCCCCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCC-----CCCCeeEEECC-Cchh-ccccccccccCcee
Confidence 2 2349999999999999988743 8999999863 23579999999 9877 5 4 5 999
Q ss_pred eeccccCCcccccCCcceeEEEEeeEEEECCEEE-EeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhh
Q 012359 281 YTPFVNNPSVAERNAFSVYYYVGLRRITVGGQRV-RVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMV 359 (465)
Q Consensus 281 ~~p~~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~-~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~ 359 (465)
|+|++..+ ..+|.|.|++|+|+++.+ .++...+.++..+...+||||||++++||+++|++|+++|.+.+.
T Consensus 219 ~~Pl~~~~--------~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~ 290 (403)
T 3aup_A 219 FTPLTITL--------QGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLP 290 (403)
T ss_dssp EEECEECT--------TSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSC
T ss_pred ecccccCC--------CCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhc
Confidence 99999853 269999999999999988 666655554444557799999999999999999999999977654
Q ss_pred cccccccccccccCCCCCCccccCCCCCccCCeEEEEEcCC--cEEEecCCCeEEEecCCCeEEEEEEecCCCCCCCcee
Q 012359 360 KNRNYTRALGAEALTGLRPCFDVPGEKTGSFPELKLHFKGG--AEVTLPVENYFAVVGEGSAVCLTVVTDREASGGPSII 437 (465)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg--~~~~l~~~~yi~~~~~~~~~C~~~i~~~~~~~~~~~I 437 (465)
.+..........+.++|... ..+|.|+|+|.|+ ++|+|++++|+++... +..|++ +...+....+.||
T Consensus 291 ---~~~~~~~~~~~~~c~~c~~~-----~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~-~~~C~~-~~~~~~~~~~~~I 360 (403)
T 3aup_A 291 ---KQAQVKSVAPFGLCFNSNKI-----NAYPSVDLVMDKPNGPVWRISGEDLMVQAQP-GVTCLG-VMNGGMQPRAEIT 360 (403)
T ss_dssp ---GGGEECCCTTCSCEECGGGC-----CCCCCEEEEESSTTCCEEEECHHHHEEEC----CEEEC-EEECCSCCSSSEE
T ss_pred ---cccccCCCCCCCceEECCCc-----CcCCcEEEEEcCCCceEEEEcccceEEEcCC-CeEEEE-EEcCCCCCCCcEE
Confidence 12222111122344556543 5789999999444 5999999999998653 678994 4433212245799
Q ss_pred ecccceeeeEEEEeCCCCEEEE-------ecCCCC
Q 012359 438 LGNFQMQNYYVEYDLRNQRLGF-------KQQLCK 465 (465)
Q Consensus 438 LG~~fl~~~y~vfD~~~~~iGf-------A~~~C~ 465 (465)
||+.|||++|+|||++++|||| ++++|+
T Consensus 361 LG~~fl~~~yvvfD~~~~rIGf~A~~~~~~~~~C~ 395 (403)
T 3aup_A 361 LGARQLEENLVVFDLARSRVGFSTSSLHSHGVKCA 395 (403)
T ss_dssp ECHHHHTTSCEEEETTTTEEEEESSCGGGGTCCGG
T ss_pred EChHHhcCeEEEEECCCCEEEEecccccccCCCcc
Confidence 9999999999999999999999 777874
No 13
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.8e-57 Score=460.67 Aligned_cols=304 Identities=17% Similarity=0.245 Sum_probs=255.7
Q ss_pred cceeeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCC
Q 012359 75 TTTTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSW 154 (465)
Q Consensus 75 ~~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~ 154 (465)
.....||.+..+..|+++|.||||||++.|+|||||+++||+|. .|....|..++.|||++|+||+..+
T Consensus 125 ~~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~---~C~s~~C~~~~~ydps~SsT~~~~~-------- 193 (451)
T 3qvc_A 125 EFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSI---KCTSESCESKNHYDSSKSKTYEKDD-------- 193 (451)
T ss_dssp --CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBT---TCCSGGGTTSCCBCGGGCTTCEEEE--------
T ss_pred cCCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC---CCCccccCCCCCCCCCCCcccccCC--------
Confidence 45567899988899999999999999999999999999999999 9954333457899999999998765
Q ss_pred CccCCCCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCCcccccEEEeceec----C----CCCCCcc
Q 012359 155 IHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVL----S----SRQPAGI 226 (465)
Q Consensus 155 ~~~~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~~~i~~~~fg~~~~----~----~~~~~Gi 226 (465)
| .|.+.||+|++.|.+++|+|++++..++ +.|||++. . ....+||
T Consensus 194 -------------------------~-~f~i~YgdGs~~G~~~~Dtv~igg~~v~-~~Fg~a~~t~~~~~~f~~~~~dGI 246 (451)
T 3qvc_A 194 -------------------------T-PVKLTSKAGTISGIFSKDLVTIGKLSVP-YKFIEMTEIVGFEPFYSESDVDGV 246 (451)
T ss_dssp -------------------------E-EEEEECSSEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEECTTHHHHSCCCEE
T ss_pred -------------------------C-EEEEEECCCEEEEEEEEEEEEECCEEEE-EEEEEEEeccccCCCccCCCCCEE
Confidence 1 8999999999999999999999999999 99999987 3 2234999
Q ss_pred cccCCCCCCc----------ccc--cCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccC
Q 012359 227 AGFGRGKTSL----------PSQ--LNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERN 294 (465)
Q Consensus 227 lGLg~~~~sl----------~~q--l~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~ 294 (465)
||||++..+. .+| +..++||+||.+. ...+|.|+|||+|+++ +.|++.|+|+..
T Consensus 247 LGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~-----~~~~G~l~fGgiD~s~-y~G~l~~~pv~~-------- 312 (451)
T 3qvc_A 247 FGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPE-----NKNKGYLTIGGIEERF-FDGPLNYEKLNH-------- 312 (451)
T ss_dssp EECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTT-----CTTEEEEEESSCCGGG-EEEEEEEEECSS--------
T ss_pred EecCCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCC-----CCCCCEEEECCcchhh-cCCceEEEEccc--------
Confidence 9999987542 233 4558999999874 2358999999999998 999999999986
Q ss_pred CcceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCC
Q 012359 295 AFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALT 374 (465)
Q Consensus 295 ~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~ 374 (465)
..+|.|.++ |+|+++ . .....++|||||+++++|++++++|.+++.+... ...+.
T Consensus 313 --~~~w~v~l~-I~Vgg~-~-----------~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~----------~~~g~ 367 (451)
T 3qvc_A 313 --DLMWQVDLD-VHFGNV-S-----------SKKANVILDSATSVITVPTEFFNQFVESASVFKV----------PFLSL 367 (451)
T ss_dssp --TTSSEEEEE-EEETTE-E-----------EEEEEEEECTTBSSEEECHHHHHHHHTTTTCEEC----------TTSSC
T ss_pred --CCeeEEEEE-EEECCc-c-----------CCCceEEEeCCCccccCCHHHHHHHHHHcCCeec----------CCCCe
Confidence 579999999 999998 1 1136799999999999999999999987754322 22456
Q ss_pred CCCCccccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecC-CCeEEEEEEecCCCCCCCceeecccceeeeEEEEeCC
Q 012359 375 GLRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGE-GSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDLR 453 (465)
Q Consensus 375 ~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~-~~~~C~~~i~~~~~~~~~~~ILG~~fl~~~y~vfD~~ 453 (465)
|.++|. . ..+|+|+|+| +|.+++||+++|+.+... ++..|+..+...+. .++.||||++|||++|+|||++
T Consensus 368 y~v~C~-~-----~~~P~itf~f-gg~~i~lp~~~yi~~~~~~~~~~C~~~i~~~~~-~~~~~ILG~~FLr~~YvVfD~~ 439 (451)
T 3qvc_A 368 YVTTCG-N-----TKLPTLEYRS-PNKVYTLEPKQYLEPLENIFSALCMLNIVPIDL-EKNTFVLGDPFMRKYFTVYDYD 439 (451)
T ss_dssp EEEETT-C-----TTCCCEEEEE-TTEEEEECHHHHEEECTTTSTTEEEECEEECCC-STTEEEECHHHHHHEEEEEETT
T ss_pred EEeeCC-c-----CcCCcEEEEE-CCEEEEEcHHHheeecccCCCCeEEEEEEeCCC-CCCCEEECHHHhhcEEEEEECC
Confidence 778997 4 6889999999 899999999999998753 45789988876431 1468999999999999999999
Q ss_pred CCEEEEecCC
Q 012359 454 NQRLGFKQQL 463 (465)
Q Consensus 454 ~~~iGfA~~~ 463 (465)
++|||||+++
T Consensus 440 n~rIGfA~ak 449 (451)
T 3qvc_A 440 NHTVGFALAK 449 (451)
T ss_dssp TTEEEEEEEC
T ss_pred CCEEEEEEcc
Confidence 9999999974
No 14
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1e-57 Score=447.72 Aligned_cols=297 Identities=22% Similarity=0.318 Sum_probs=250.1
Q ss_pred CCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCCccCCCCCC
Q 012359 84 HSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHHESIQCR 163 (465)
Q Consensus 84 ~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~~~~~~~c~ 163 (465)
..++.|+++|.||||+|+++|+|||||+++||+|. .|..|.++.++.|||++|+||+.++|
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~---~C~~~~~~~~~~y~~~~SsT~~~~~~---------------- 72 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSS---ETPKSSATGHAIYTPSKSSTSKKVSG---------------- 72 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT---TSCHHHHTTSCCBCGGGCTTCEECTT----------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecC---CCCccccCCCCcCCcccCcCceEcCC----------------
Confidence 35678999999999999999999999999999999 99998887889999999999988641
Q ss_pred CCCCCCccCCCCCccCCCceeEecCCce-EEEeEEEEEEEcCCcccccEEEeceecCC------CCCCcccccCCCCCCc
Q 012359 164 DCNDEPLATSKNCTQICPSYLVLYGSGL-TEGIALSETLNLPNRIIPNFLVGCSVLSS------RQPAGIAGFGRGKTSL 236 (465)
Q Consensus 164 ~c~~~~~~~~~~c~~~C~~~~~~Yg~g~-~~G~~~~D~v~~~~~~i~~~~fg~~~~~~------~~~~GilGLg~~~~sl 236 (465)
| .|.+.|++|+ +.|.+++|+|+|++..++++.|||++... ...+||||||++..+.
T Consensus 73 ----------------~-~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~ 135 (329)
T 3c9x_A 73 ----------------A-SWSISYGDGSSSSGDVYTDKVTIGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQ 135 (329)
T ss_dssp ----------------C-BEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCC
T ss_pred ----------------C-eEEEEeCCCCcEEEEEEEEEEEECCEEEcceEEEEEEecCccccccCCCceeEEeCcccccc
Confidence 2 8999999998 89999999999999999999999998643 3459999999987654
Q ss_pred c-------------cccCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCCcceeEEEE
Q 012359 237 P-------------SQLNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSVYYYVG 303 (465)
Q Consensus 237 ~-------------~ql~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~~~w~v~ 303 (465)
+ .|+..++||+||.+. ..|.|+|||+|+++ +.|++.|+|+... ..+|.|.
T Consensus 136 ~~~~~~~~~~~~l~~~i~~~~FS~~l~~~-------~~G~l~fGg~d~~~-~~g~l~~~p~~~~---------~~~~~v~ 198 (329)
T 3c9x_A 136 VRPHPQKTWFSNAASSLAEPLFTADLRHG-------QNGSYNFGYIDTSV-AKGPVAYTPVDNS---------QGFWEFT 198 (329)
T ss_dssp CBSSCCCCHHHHHHTTSSSSEEEEECCSS-------SCEEEEESSCCGGG-CSSCEEEEECBCT---------TSSCEEE
T ss_pred cCCCCCCCHHHHHHHhcCCCEEEEEecCC-------CCcEEEEeCcChhh-cccceEEEEccCC---------CceEEEE
Confidence 2 345679999999752 47999999999998 9999999999753 4689999
Q ss_pred eeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCCCCCCccccC
Q 012359 304 LRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLRPCFDVP 383 (465)
Q Consensus 304 l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 383 (465)
|++|+|+++.+. .....+||||||++++||++++++|++++..... ....+.|.++|+
T Consensus 199 l~~i~v~~~~~~----------~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~~---------~~~~~~~~~~C~--- 256 (329)
T 3c9x_A 199 ASGYSVGGGKLN----------RNSIDGIADTGTTLLLLDDNVVDAYYANVQSAQY---------DNQQEGVVFDCD--- 256 (329)
T ss_dssp ECCEEETTCCCC----------SCCEEEEECTTCCSEEECHHHHHHHHTTCTTCEE---------ETTTTEEEEETT---
T ss_pred EeeEEECCEecc----------CCCceEEEECCCCcEeCCHHHHHHHHHhCCCcEE---------cCCCCEEEEECC---
Confidence 999999997653 2246799999999999999999998877633211 112345668897
Q ss_pred CCCCccCCeEEEEEcCCcEEEecCCCeEEEecC-CCeEEEEEEecCCCCCCCceeecccceeeeEEEEeCCCCEEEEecC
Q 012359 384 GEKTGSFPELKLHFKGGAEVTLPVENYFAVVGE-GSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDLRNQRLGFKQQ 462 (465)
Q Consensus 384 ~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~-~~~~C~~~i~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfA~~ 462 (465)
..+|+|+|+| +|++|+||+++|+++... +...|++.+...+ ..+.||||+.|||++|+|||++++|||||+.
T Consensus 257 ----~~~P~i~f~f-~g~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~--~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 257 ----EDLPSFSFGV-GSSTITIPGDLLNLTPLEEGSSTCFGGLQSSS--GIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp ----CCCCCEEEEE-TTEEEEECGGGGEEEESSTTCSEEEESEEECT--TTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred ----CCCCcEEEEE-CCEEEEECHHHeeeeccCCCCCeEEEEEEcCC--CCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 4689999999 799999999999987633 3478998776532 3457999999999999999999999999974
No 15
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=9.1e-58 Score=448.41 Aligned_cols=305 Identities=26% Similarity=0.396 Sum_probs=254.5
Q ss_pred eeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCCcc
Q 012359 78 TTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHH 157 (465)
Q Consensus 78 ~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~~~ 157 (465)
..||. ..++.|+++|.||||||+++|+|||||+++||+|. .|..+.|..++.|||++|+||+..+
T Consensus 4 ~~~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~---~C~~~~C~~~~~y~~~~SsT~~~~~----------- 68 (329)
T 1htr_B 4 YEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSV---YCQSQACTSHSRFNPSESSTYSTNG----------- 68 (329)
T ss_dssp CCGGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT---TCCSHHHHTSCCBCGGGCTTCEEEE-----------
T ss_pred eeeeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC---CCCCcccCCCCcCCCccCCCeEECC-----------
Confidence 35677 67889999999999999999999999999999999 9975222347899999999999865
Q ss_pred CCCCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCCcccccEEEeceecCCC------CCCcccccCC
Q 012359 158 ESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSSR------QPAGIAGFGR 231 (465)
Q Consensus 158 ~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~~~i~~~~fg~~~~~~~------~~~GilGLg~ 231 (465)
| .|.+.|++|++.|.+++|+|++++..++++.|||++.... ..+||||||+
T Consensus 69 ----------------------~-~~~i~Yg~gs~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 125 (329)
T 1htr_B 69 ----------------------Q-TFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAY 125 (329)
T ss_dssp ----------------------E-EEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCC
T ss_pred ----------------------c-EEEEEeCCCCeEEEEEeeeEEEcceEECceEEEEEEEccccccccCCCceEEecCC
Confidence 2 8999999999999999999999999999999999986532 3499999999
Q ss_pred CCCCcc----------cc--cCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCCccee
Q 012359 232 GKTSLP----------SQ--LNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSVY 299 (465)
Q Consensus 232 ~~~sl~----------~q--l~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~~~ 299 (465)
+..+.. +| +..++||+||.+.. ....|.|+|||+|+++ +.|++.|+|+.. ..+
T Consensus 126 ~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~----~~~~G~l~fGg~d~~~-~~g~l~~~p~~~----------~~~ 190 (329)
T 1htr_B 126 PALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQ----GSSGGAVVFGGVDSSL-YTGQIYWAPVTQ----------ELY 190 (329)
T ss_dssp CSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSC----SSEEEEEEESSCCGGG-EEEEEEEEEBCS----------SSS
T ss_pred CcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCC----CCCCcEEEEcccCHHH-cCCceEEEECCC----------Cce
Confidence 887643 23 44589999998741 1148999999999998 899999999986 479
Q ss_pred EEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCCCCCCc
Q 012359 300 YYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLRPC 379 (465)
Q Consensus 300 w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~C 379 (465)
|.|.|++|+|+++.+.. ......++|||||++++||++++++|.+++.+... ..+.|.++|
T Consensus 191 ~~v~l~~i~v~~~~~~~--------~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~-----------~~g~~~~~C 251 (329)
T 1htr_B 191 WQIGIEEFLIGGQASGW--------CSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQED-----------EYGQFLVNC 251 (329)
T ss_dssp CEEEECEEEETTEECCT--------TTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEEC-----------TTSCEEECG
T ss_pred EEEEEeEEEECCceeee--------cCCCceEEEecCCccEECCHHHHHHHHHHhCCeec-----------CCCeEEEeC
Confidence 99999999999987531 02346799999999999999999999988754321 234577899
Q ss_pred cccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecCCCeEEEEEEecCCC--CCCC-ceeecccceeeeEEEEeCCCCE
Q 012359 380 FDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREA--SGGP-SIILGNFQMQNYYVEYDLRNQR 456 (465)
Q Consensus 380 ~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~~~~~C~~~i~~~~~--~~~~-~~ILG~~fl~~~y~vfD~~~~~ 456 (465)
+.. ..+|+|+|+| +|++|+|++++|+++.. +.|+..+...+. ..++ .||||++|||++|+|||++++|
T Consensus 252 ~~~-----~~~P~i~f~f-~g~~~~i~~~~y~~~~~---g~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~ 322 (329)
T 1htr_B 252 NSI-----QNLPSLTFII-NGVEFPLPPSSYILSNN---GYCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNR 322 (329)
T ss_dssp GGG-----GGSCCEEEEE-TTEEEEECHHHHEEECS---SCEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTE
T ss_pred CCc-----ccCCcEEEEE-CCEEEEECHHHhcccCC---CEEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCE
Confidence 876 6899999999 89999999999999865 389976654321 1244 7999999999999999999999
Q ss_pred EEEecCC
Q 012359 457 LGFKQQL 463 (465)
Q Consensus 457 iGfA~~~ 463 (465)
||||+++
T Consensus 323 igfa~~~ 329 (329)
T 1htr_B 323 VGFATAA 329 (329)
T ss_dssp EEEEEEC
T ss_pred EEEEeCC
Confidence 9999874
No 16
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=2e-57 Score=445.68 Aligned_cols=295 Identities=18% Similarity=0.280 Sum_probs=247.8
Q ss_pred CcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCCccCCCCCCC
Q 012359 85 SYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHHESIQCRD 164 (465)
Q Consensus 85 ~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~~~~~~~c~~ 164 (465)
.++.|+++|.||||+|++.|+|||||+++||+|. .|..|.+ .++.|||++|+||+.+.|
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~---~C~~~~~-~~~~y~~~~SsT~~~~~~----------------- 71 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSS---ETTASEV-XQTIYTPSKSTTAKLLSG----------------- 71 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT---TSCGGGC--CCCBCGGGCTTCEEEEE-----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecC---CCCcccc-ccCccCCccCccceecCC-----------------
Confidence 4678999999999999999999999999999999 9999877 789999999999998641
Q ss_pred CCCCCccCCCCCccCCCceeEecCCce-EEEeEEEEEEEcCCcccccEEEeceecCC------CCCCcccccCCCCCCcc
Q 012359 165 CNDEPLATSKNCTQICPSYLVLYGSGL-TEGIALSETLNLPNRIIPNFLVGCSVLSS------RQPAGIAGFGRGKTSLP 237 (465)
Q Consensus 165 c~~~~~~~~~~c~~~C~~~~~~Yg~g~-~~G~~~~D~v~~~~~~i~~~~fg~~~~~~------~~~~GilGLg~~~~sl~ 237 (465)
| .|.+.|++|+ +.|.+++|+|+|++..++++.|||++... ...+||||||++..+.+
T Consensus 72 ---------------~-~~~i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 135 (329)
T 1oew_A 72 ---------------A-TWSISYGDGSSSSGDVYTDTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTV 135 (329)
T ss_dssp ---------------E-EEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCC
T ss_pred ---------------C-eEEEEeCCCCcEEEEEEEEEEEECCEEEeeeEEEEEEecCccccccCCCceEEEecccccccc
Confidence 2 8999999998 89999999999999999999999998643 34599999999876542
Q ss_pred -------------cccCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCCcceeEEEEe
Q 012359 238 -------------SQLNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSVYYYVGL 304 (465)
Q Consensus 238 -------------~ql~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~~~w~v~l 304 (465)
+|+..++||+||.+. ..|.|+|||+|+++ +.|++.|+|+.+. ..+|.|.|
T Consensus 136 ~~~~~~~~~~~l~~~i~~~~FS~~L~~~-------~~G~l~fGg~d~~~-~~g~l~~~p~~~~---------~~~~~v~l 198 (329)
T 1oew_A 136 SPTQQKTFFDNAKASLDSPVFTADLGYH-------APGTYNFGFIDTTA-YTGSITYTAVSTK---------QGFWEWTS 198 (329)
T ss_dssp BSSCCCCHHHHHTTTSSSSEEEEECCSS-------SCEEEEESCCCTTS-SSSCCEEEECBCT---------TSSCEEEE
T ss_pred CcCCCCCHHHHHHHhccCcEEEEEccCC-------CCeEEEEeccChHh-cccceEEEEccCC---------CceEEEEE
Confidence 345569999999752 47999999999998 9999999999753 46899999
Q ss_pred eEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCCCCCCccccCC
Q 012359 305 RRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLRPCFDVPG 384 (465)
Q Consensus 305 ~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 384 (465)
++|+|+++.+.. ....+||||||++++||++++++|++++.+... ....+.|.++|+
T Consensus 199 ~~i~v~~~~~~~----------~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~~---------~~~~g~~~~~C~---- 255 (329)
T 1oew_A 199 TGYAVGSGTFKS----------TSIDGIADTGTTLLYLPATVVSAYWAQVSGAKS---------SSSVGGYVFPCS---- 255 (329)
T ss_dssp EEEEETTSCCEE----------EEEEEEECTTCCSEEECHHHHHHHHTTSTTCEE---------ETTTTEEEEETT----
T ss_pred eeEEECCeeccC----------CCceEEEeCCCCCEECCHHHHHHHHHhCCCcEE---------cCCCCEEEEECC----
Confidence 999999976531 125799999999999999999998877633211 112345668997
Q ss_pred CCCccCCeEEEEEcCCcEEEecCCCeEEEecC-CCeEEEEEEecCCCCCCCceeecccceeeeEEEEeC-CCCEEEEecC
Q 012359 385 EKTGSFPELKLHFKGGAEVTLPVENYFAVVGE-GSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDL-RNQRLGFKQQ 462 (465)
Q Consensus 385 ~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~-~~~~C~~~i~~~~~~~~~~~ILG~~fl~~~y~vfD~-~~~~iGfA~~ 462 (465)
..+|+|+|+| ||++|+||+++|+++... +...|++.+...+ ..+.||||++|||++|+|||+ +++|||||+.
T Consensus 256 ---~~~P~i~f~f-gg~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~--~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 256 ---ATLPSFTFGV-GSARIVIPGDYIDFGPISTGSSSCFGGIQSSA--GIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp ---CCCCCEEEEE-TTEEEEECHHHHEEEESSTTCSEEEESEEEST--TTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred ---CCCCcEEEEE-CCEEEEECHHHeeeeecCCCCCeEEEEEEeCC--CCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 4689999999 899999999999987532 3578999776532 345799999999999999999 9999999974
No 17
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=1.5e-57 Score=447.68 Aligned_cols=302 Identities=23% Similarity=0.330 Sum_probs=251.7
Q ss_pred ceeeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCC-------CCCCCCCCCCCCCCCcccccCC
Q 012359 76 TTTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYC-------SSSKIPSFIPKLSSSSRLLGCQ 148 (465)
Q Consensus 76 ~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C-------~~~~~~~y~p~~SsT~~~~~c~ 148 (465)
++..+|.+. +..|+++|.||||+|+++|+|||||+++||++... .|..| .|..++.|||++|+||+...
T Consensus 2 ~~~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~-~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~-- 77 (334)
T 1j71_A 2 DVPTTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDA-ECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLN-- 77 (334)
T ss_dssp CEEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEE-EECCCSTTCCTTGGGSSCCBCGGGCTTCEEEE--
T ss_pred ceeEEEecC-CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCC-CCcCcccccccccccCCCcCCcccCCCcccCC--
Confidence 456778775 68999999999999999999999999999986411 36543 23357899999999999865
Q ss_pred CccCCCCccCCCCCCCCCCCCccCCCCCccCCCceeEecCCce-EEEeEEEEEEEcCCcccccEEEeceecCCCCCCccc
Q 012359 149 NPKCSWIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGL-TEGIALSETLNLPNRIIPNFLVGCSVLSSRQPAGIA 227 (465)
Q Consensus 149 ~~~c~~~~~~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~-~~G~~~~D~v~~~~~~i~~~~fg~~~~~~~~~~Gil 227 (465)
| .|.+.|++|+ +.|.+++|+|+|++..++++.|||++... ..+|||
T Consensus 78 -------------------------------~-~~~i~Yg~Gs~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~-~~~Gil 124 (334)
T 1j71_A 78 -------------------------------Q-DFSIEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTS-VDQGIM 124 (334)
T ss_dssp -------------------------------E-EEEEEBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-SSSCEE
T ss_pred -------------------------------C-ceEEEECCCCEEEEEEEEEEEEECCEEEccEEEEEEEecC-CCccEE
Confidence 2 8999999997 79999999999999999999999998764 449999
Q ss_pred ccCCCCC--------Cccccc------CCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCccccc
Q 012359 228 GFGRGKT--------SLPSQL------NLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAER 293 (465)
Q Consensus 228 GLg~~~~--------sl~~ql------~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~ 293 (465)
|||++.. +++.|| ..++||+||.+. ....|.|+|||+|+++ +.|++.|+|+..
T Consensus 125 GLg~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~-----~~~~G~l~fGg~d~~~-~~g~l~~~p~~~------- 191 (334)
T 1j71_A 125 GIGFTADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSE-----DASTGKIIFGGVDNAK-YTGTLTALPVTS------- 191 (334)
T ss_dssp ECSCGGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCT-----TCSEEEEEETEEETTS-EEEEEEEEECCC-------
T ss_pred EEcCCcccCccccCCcHHHHHHHCCCCCccEEEEEeCCC-----CCCCeEEEEeeechHH-ccCceEEEEccC-------
Confidence 9999764 344443 348999999863 2358999999999998 899999999987
Q ss_pred CCcceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccC
Q 012359 294 NAFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEAL 373 (465)
Q Consensus 294 ~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~ 373 (465)
..+|.|.|++|+|+++.+..+ ..++|||||++++||++++++|++++.+... ...+
T Consensus 192 ---~~~~~v~l~~i~v~g~~~~~~-----------~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~----------~~~~ 247 (334)
T 1j71_A 192 ---SVELRVHLGSINFDGTSVSTN-----------ADVVLDSGTTITYFSQSTADKFARIVGATWD----------SRNE 247 (334)
T ss_dssp ---SSSCEEEEEEEEETTEEEEEE-----------EEEEECTTCSSEEECHHHHHHHHHHHTCEEE----------TTTT
T ss_pred ---CCeEEEEEeEEEECCEeccCC-----------ccEEEeCCCCcEecCHHHHHHHHHHcCCccc----------CCCc
Confidence 468999999999999987532 5699999999999999999999998865432 1222
Q ss_pred CCC-CCccccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecCCCeEEEEEEecCCCCCCCceeecccceeeeEEEEeC
Q 012359 374 TGL-RPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDL 452 (465)
Q Consensus 374 ~~~-~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~~~~~C~~~i~~~~~~~~~~~ILG~~fl~~~y~vfD~ 452 (465)
.|. ++|+ .+|.|+|+|.||++++|++++|+++..+ +..|+..+... +.||||+.|||++|+|||+
T Consensus 248 ~~~~~~C~--------~~p~i~f~f~~g~~~~i~~~~y~~~~~~-~~~C~~~i~~~-----~~~iLG~~fl~~~y~vfD~ 313 (334)
T 1j71_A 248 IYRLPSCD--------LSGDAVFNFDQGVKITVPLSELILKDSD-SSICYFGISRN-----DANILGDNFLRRAYIVYDL 313 (334)
T ss_dssp EEECSSSC--------CCSEEEEEESTTCEEEEEGGGGEEECSS-SSCEEESEEEC-----TTCEECHHHHTTEEEEEET
T ss_pred eEEEEcCC--------CCCceEEEEcCCcEEEECHHHheeecCC-CCeeEEEEeEC-----CCcEEChHhhccEEEEEEC
Confidence 455 8995 4799999996689999999999998654 34599888652 3599999999999999999
Q ss_pred CCCEEEEecCCCC
Q 012359 453 RNQRLGFKQQLCK 465 (465)
Q Consensus 453 ~~~~iGfA~~~C~ 465 (465)
+++|||||+++|+
T Consensus 314 ~~~~igfA~~~~~ 326 (334)
T 1j71_A 314 DDKTISLAQVKYT 326 (334)
T ss_dssp TTTEEEEEEECCC
T ss_pred CCCEEEEEecCCC
Confidence 9999999999995
No 18
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=8.8e-58 Score=451.06 Aligned_cols=310 Identities=22% Similarity=0.392 Sum_probs=259.1
Q ss_pred cceeeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCC----CCCCCCCCCCCCCCCCCcccccCCCc
Q 012359 75 TTTTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCK----YCSSSKIPSFIPKLSSSSRLLGCQNP 150 (465)
Q Consensus 75 ~~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~----~C~~~~~~~y~p~~SsT~~~~~c~~~ 150 (465)
.....||.+..+..|+++|.||||||+++|+|||||+++||+|. .|. .|. .++.|||++|+||+...
T Consensus 6 ~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~---~C~~~~~~C~--~~~~y~~~~SsT~~~~~---- 76 (341)
T 3k1w_A 6 TTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS---KCSRLYTACV--YHKLFDASDSSSYKHNG---- 76 (341)
T ss_dssp BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT---TSCTTCHHHH--TSCCBCGGGCTTCEEEE----
T ss_pred CCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccC---CCCCCCCccc--CCCCCCCCcCcCeeECC----
Confidence 45678899988999999999999999999999999999999999 898 354 47899999999998765
Q ss_pred cCCCCccCCCCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCCcccccEEEeceecCC------CCCC
Q 012359 151 KCSWIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSS------RQPA 224 (465)
Q Consensus 151 ~c~~~~~~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~~~i~~~~fg~~~~~~------~~~~ 224 (465)
| .|.+.|++|++.|.+++|+|+|++..+ ++.|||++... ...+
T Consensus 77 -----------------------------~-~~~i~Yg~gs~~G~~~~D~v~ig~~~v-~~~fg~~~~~~~~~~~~~~~~ 125 (341)
T 3k1w_A 77 -----------------------------T-ELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFD 125 (341)
T ss_dssp -----------------------------E-EEEEEETTEEEEEEEEEEEEEETTEEE-EEEEEEEEECCHHHHTTCSSS
T ss_pred -----------------------------C-EEEEEECCcEEEEEEEEEEEEECCcee-eEEEEEEEEccccccccCCcc
Confidence 2 899999999999999999999999999 99999998543 2349
Q ss_pred cccccCCCCCC----------cccc--cCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccc
Q 012359 225 GIAGFGRGKTS----------LPSQ--LNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAE 292 (465)
Q Consensus 225 GilGLg~~~~s----------l~~q--l~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~ 292 (465)
||||||++..+ +.+| +..++||+||.+.. .......|.|+|||+|+++ +.|++.|+|+..
T Consensus 126 GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~-~~~~~~~G~l~fGg~d~~~-~~g~l~~~p~~~------ 197 (341)
T 3k1w_A 126 GVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDS-ENSQSLGGQIVLGGSDPQH-YEGNFHYINLIK------ 197 (341)
T ss_dssp EEEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC------CCEEEEESSCCGGG-EEEEEEEEECSS------
T ss_pred eEEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeCCC-CcCCCCCCEEEECccChHH-ccCceEEEecCC------
Confidence 99999998765 2334 45689999998742 1122348999999999998 999999999986
Q ss_pred cCCcceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhccccccccccccc
Q 012359 293 RNAFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEA 372 (465)
Q Consensus 293 ~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 372 (465)
..+|.|.+++|+|+++.+.. .....++|||||++++||++++++|++++.+... ..
T Consensus 198 ----~~~w~v~l~~i~v~~~~~~~---------~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~-----------~~ 253 (341)
T 3k1w_A 198 ----TGVWQIQMKGVSVGSSTLLC---------EDGCLALVDTGASYISGSTSSIEKLMEALGAKKR-----------LF 253 (341)
T ss_dssp ----TTSCEEEECCEEETTEEEEC---------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC-----------SS
T ss_pred ----CCEEEEEEeEEEECCEEeec---------CCCCEEEEECCCChhcCCHHHHHHHHHHcCCeec-----------CC
Confidence 57999999999999987532 2346799999999999999999999988854322 12
Q ss_pred CCCCCCccccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecC-CCeEEEEEEecCC--CCCCCceeecccceeeeEEE
Q 012359 373 LTGLRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGE-GSAVCLTVVTDRE--ASGGPSIILGNFQMQNYYVE 449 (465)
Q Consensus 373 ~~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~-~~~~C~~~i~~~~--~~~~~~~ILG~~fl~~~y~v 449 (465)
+ |.++|... ..+|+|+|+| +|++|+|++++|+++... ++..|+..+...+ ...++.||||++|||++|+|
T Consensus 254 g-~~~~C~~~-----~~~p~i~f~f-~g~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~v 326 (341)
T 3k1w_A 254 D-YVVKCNEG-----PTLPDISFHL-GGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTE 326 (341)
T ss_dssp C-EEEEGGGG-----GGCCCEEEEE-TTEEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEE
T ss_pred C-eEEeCCCC-----CcCCcEEEEE-CCEEEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEE
Confidence 3 78899876 6889999999 899999999999987643 3678998776532 12346799999999999999
Q ss_pred EeCCCCEEEEecCC
Q 012359 450 YDLRNQRLGFKQQL 463 (465)
Q Consensus 450 fD~~~~~iGfA~~~ 463 (465)
||++++|||||+++
T Consensus 327 fD~~~~~igfA~a~ 340 (341)
T 3k1w_A 327 FDRRNNRIGFALAR 340 (341)
T ss_dssp EETTTTEEEEEEEC
T ss_pred EeCCCCEEEEEECC
Confidence 99999999999975
No 19
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=3.8e-57 Score=446.33 Aligned_cols=305 Identities=21% Similarity=0.337 Sum_probs=251.2
Q ss_pred eeeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCC-------CCCCCCCCCCCCCCCcccccCCC
Q 012359 77 TTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYC-------SSSKIPSFIPKLSSSSRLLGCQN 149 (465)
Q Consensus 77 ~~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C-------~~~~~~~y~p~~SsT~~~~~c~~ 149 (465)
+..++.+ .++.|+++|.||||+|+++|+|||||+++||++... .|..| .|..++.|||++|+||+...
T Consensus 3 v~~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~-~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~--- 77 (342)
T 2qzx_A 3 VAVTLHN-EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNV-ICIPKWRGDKGDFCKSAGSYSPASSRTSQNLN--- 77 (342)
T ss_dssp EEEEEEE-CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEE-EECCCSSSCCTTGGGTTCCBCGGGCTTCEEEE---
T ss_pred eeEEEec-CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCC-CccCccccCccccccCCCcCCcccCCCcccCC---
Confidence 4567777 468999999999999999999999999999985411 36533 22357899999999999865
Q ss_pred ccCCCCccCCCCCCCCCCCCccCCCCCccCCCceeEecCCce-EEEeEEEEEEEcCCcccccEEEeceecCCCCCCcccc
Q 012359 150 PKCSWIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGL-TEGIALSETLNLPNRIIPNFLVGCSVLSSRQPAGIAG 228 (465)
Q Consensus 150 ~~c~~~~~~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~-~~G~~~~D~v~~~~~~i~~~~fg~~~~~~~~~~GilG 228 (465)
| .|.+.|++|+ +.|.+++|+|+|++..++++.|||++... ..+||||
T Consensus 78 ------------------------------~-~~~i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~-~~~GilG 125 (342)
T 2qzx_A 78 ------------------------------T-RFDIKYGDGSYAKGKLYKDTVGIGGVSVRDQLFANVWSTS-ARKGILG 125 (342)
T ss_dssp ------------------------------E-EEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEC-SSSCEEE
T ss_pred ------------------------------C-cEEEEeCCCCeEEEEEEEEEEEECCEEecceEEEEEEecC-CCcCEEE
Confidence 2 8999999997 78999999999999999999999998764 4499999
Q ss_pred cCCCCC--------Cccccc------CCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccC
Q 012359 229 FGRGKT--------SLPSQL------NLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERN 294 (465)
Q Consensus 229 Lg~~~~--------sl~~ql------~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~ 294 (465)
||++.. +++.|| ..++||+||.+. ....|.|+|||+|+++ +.|++.|+|+..
T Consensus 126 Lg~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~-----~~~~G~l~fGg~d~~~-~~g~l~~~p~~~-------- 191 (342)
T 2qzx_A 126 IGFQSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSA-----EASTGQIIFGGIDKAK-YSGSLVDLPITS-------- 191 (342)
T ss_dssp CSCGGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCT-----TCSEEEEEETEEETTS-BSSCCEEEECCC--------
T ss_pred EccccccCCCccCccHHHHHHHCCCcCccEEEEEeCCC-----CCCCeEEEECccchhh-EecceEEEeccC--------
Confidence 999764 444443 348999999863 2357999999999998 999999999987
Q ss_pred CcceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCC
Q 012359 295 AFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALT 374 (465)
Q Consensus 295 ~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~ 374 (465)
..+|.|.|++|+|+++.+..+ ..++|||||++++||++++++|++++.+.... .....+.
T Consensus 192 --~~~~~v~l~~i~v~g~~~~~~-----------~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~-------~~~~~~~ 251 (342)
T 2qzx_A 192 --EKKLTVGLRSVNVRGRNVDAN-----------TNVLLDSGTTISYFTRSIVRNILYAIGAQMKF-------DSAGNKV 251 (342)
T ss_dssp --SSSCEEEEEEEEETTEEEEEE-----------EEEEECTTCSSEEECHHHHHHHHHHHTCEEEE-------CTTSCEE
T ss_pred --CceEEEEEeEEEECCEecCCC-----------cCEEEeCCCCCEEcCHHHHHHHHHHhCCeeee-------ccCCCcE
Confidence 458999999999999887532 56999999999999999999999988664320 0111225
Q ss_pred CCCCccccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEec----CCCeEEEEEEecCCCCCCCceeecccceeeeEEEE
Q 012359 375 GLRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVG----EGSAVCLTVVTDREASGGPSIILGNFQMQNYYVEY 450 (465)
Q Consensus 375 ~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~----~~~~~C~~~i~~~~~~~~~~~ILG~~fl~~~y~vf 450 (465)
|.++|+ .+|.|+|+|.||++|+|++++|+++.. ++...|+..+... +.||||++|||++|+||
T Consensus 252 ~~~~C~--------~~p~i~f~f~~g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~-----~~~iLG~~fl~~~y~vf 318 (342)
T 2qzx_A 252 YVADCK--------TSGTIDFQFGNNLKISVPVSEFLFQTYYTSGKPFPKCEVRIRES-----EDNILGDNFLRSAYVVY 318 (342)
T ss_dssp EEECTT--------CCCEEEEEETTTEEEEEEGGGGEECCBCTTSCBCSSEEESEEEC-----SSCEECHHHHTTEEEEE
T ss_pred EEEECC--------CCCcEEEEECCCcEEEEcHHHhcccccccCCCCCCccEEEEecC-----CCcEeChHhhhcEEEEE
Confidence 677894 479999999668999999999998742 2346799888652 35999999999999999
Q ss_pred eCCCCEEEEecCCCC
Q 012359 451 DLRNQRLGFKQQLCK 465 (465)
Q Consensus 451 D~~~~~iGfA~~~C~ 465 (465)
|++++|||||+++|+
T Consensus 319 D~~~~~igfA~~~~~ 333 (342)
T 2qzx_A 319 NLDDKKISMAPVKYT 333 (342)
T ss_dssp ETTTTEEEEEEBCCC
T ss_pred ECCCCEEEEEeeCCC
Confidence 999999999999995
No 20
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=3e-57 Score=458.32 Aligned_cols=302 Identities=20% Similarity=0.332 Sum_probs=254.3
Q ss_pred ceeeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCC
Q 012359 76 TTTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWI 155 (465)
Q Consensus 76 ~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~ 155 (465)
....+|.+..++.|+++|.||||||++.|+|||||+++||+|. .|..+.|..++.|||++|+||+..+
T Consensus 127 ~~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~---~C~~~~C~~~~~ydps~SsT~~~~~--------- 194 (453)
T 2bju_A 127 NDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSV---KCTTAGCLTKHLYDSSKSRTYEKDG--------- 194 (453)
T ss_dssp SEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT---TCCSTTGGGSCCBCGGGCTTCEEEE---------
T ss_pred CCceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEecc---CCCccccCCCCcCCCccCCceeECC---------
Confidence 3557888888899999999999999999999999999999999 9985555558999999999999865
Q ss_pred ccCCCCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCCcccccEEEeceecCC--------CCCCccc
Q 012359 156 HHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSS--------RQPAGIA 227 (465)
Q Consensus 156 ~~~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~~~i~~~~fg~~~~~~--------~~~~Gil 227 (465)
| .|.+.||+|++.|.+++|+|++++.+++ +.|||++... ...+|||
T Consensus 195 ------------------------~-~~~i~YgdGs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIl 248 (453)
T 2bju_A 195 ------------------------T-KVEMNYVSGTVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGIL 248 (453)
T ss_dssp ------------------------E-EEEEECSSSEEEEEEEEEEEEETTEEEE-EEEEEEEECGGGTTHHHHSSCCEEE
T ss_pred ------------------------c-EEEEEcCCCCeEEEEEEEEEEEeCcEEE-EEEEEEEEecccCccccccCCceeE
Confidence 2 8999999999999999999999999999 9999998764 2349999
Q ss_pred ccCCCCCCcc----------cc--cCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCC
Q 012359 228 GFGRGKTSLP----------SQ--LNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNA 295 (465)
Q Consensus 228 GLg~~~~sl~----------~q--l~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~ 295 (465)
|||++..+.. +| +..++||+||.+. ...+|.|+|||+|+++ +.|++.|+|+..
T Consensus 249 GLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~-----~~~~G~l~fGg~D~~~-y~G~l~~~pv~~--------- 313 (453)
T 2bju_A 249 GLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLPVH-----DKHTGFLTIGGIEERF-YEGPLTYEKLNH--------- 313 (453)
T ss_dssp ECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBT-----TTBCEEEEESSCCGGG-EEEEEEEEEEEE---------
T ss_pred eccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeCCC-----CCCCeEEEECCCCHHH-cCCceEEEecCC---------
Confidence 9999876543 33 4458999999874 2358999999999998 999999999976
Q ss_pred cceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccC-C
Q 012359 296 FSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEAL-T 374 (465)
Q Consensus 296 ~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~-~ 374 (465)
..+|.|.++ |+|++ .+ . ....+||||||+++++|++++++|.+++.+. ....+ .
T Consensus 314 -~~~w~V~l~-I~Vgg-~~-~----------~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~-----------~~~~g~~ 368 (453)
T 2bju_A 314 -DLYWQITLD-AHVGN-IM-L----------EKANCIVDSGTSAITVPTDFLNKMLQNLDVI-----------KVPFLPF 368 (453)
T ss_dssp -ETTEEEEEE-EEETT-EE-E----------EEEEEEECTTCCSEEECHHHHHHHTTTSSCE-----------ECTTSSC
T ss_pred -CceEEEEEE-EEECc-EE-e----------ccccEEEcCCCCeEecCHHHHHHHHHHhCCc-----------ccCCCce
Confidence 579999999 99999 33 1 1267999999999999999999988776432 11233 5
Q ss_pred CCCCccccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecC-CCeEEEEEEecCCCCCCCceeecccceeeeEEEEeCC
Q 012359 375 GLRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGE-GSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDLR 453 (465)
Q Consensus 375 ~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~-~~~~C~~~i~~~~~~~~~~~ILG~~fl~~~y~vfD~~ 453 (465)
|.++|+. ..+|+|+|+| +|.+|+|++++|+++... +...|+..+...+ ...+.||||++|||++|+|||++
T Consensus 369 ~~v~C~~------~~~P~itf~f-gg~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~-~~~~~~ILGd~Flr~~yvVFD~~ 440 (453)
T 2bju_A 369 YVTLCNN------SKLPTFEFTS-ENGKYTLEPEYYLQHIEDVGPGLCMLNIIGLD-FPVPTFILGDPFMRKYFTVFDYD 440 (453)
T ss_dssp EEEETTC------TTCCCEEEEC-SSCEEEECHHHHEEECTTTSTTEEEECEEECC-CSSCEEEECHHHHHHEEEEEETT
T ss_pred EEEecCC------CCCCcEEEEE-CCEEEEECHHHhEeecccCCCceEEEEEEeCC-CCCCCEEECHHHhhcEEEEEECC
Confidence 6788974 3689999999 899999999999998754 4569998776543 12358999999999999999999
Q ss_pred CCEEEEecCC
Q 012359 454 NQRLGFKQQL 463 (465)
Q Consensus 454 ~~~iGfA~~~ 463 (465)
++|||||+++
T Consensus 441 n~rIGfA~~~ 450 (453)
T 2bju_A 441 NHSVGIALAK 450 (453)
T ss_dssp TTEEEEEEEC
T ss_pred CCEEEEEEcc
Confidence 9999999874
No 21
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=9.6e-57 Score=440.07 Aligned_cols=294 Identities=20% Similarity=0.273 Sum_probs=248.0
Q ss_pred CCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCCccCCCCCC
Q 012359 84 HSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHHESIQCR 163 (465)
Q Consensus 84 ~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~~~~~~~c~ 163 (465)
..+..|+++|.||||+|++.|+|||||+++||+|. .|..| ++.++.|||++|+||+...
T Consensus 12 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~---~c~~c-~~~~~~y~~~~SsT~~~~~----------------- 70 (325)
T 2apr_A 12 GNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIAST---LCTNC-GSGQTKYDPNQSSTYQADG----------------- 70 (325)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT---TCSSC-CTTSCCBCGGGCTTCEEEE-----------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccC---CCchH-hcCCCCCCcccCCCeeeCC-----------------
Confidence 45689999999999999999999999999999999 99999 7778999999999998754
Q ss_pred CCCCCCccCCCCCccCCCceeEecCCce-EEEeEEEEEEEcCCcccccEEEeceecCCC-----CCCcccccCCCCCCc-
Q 012359 164 DCNDEPLATSKNCTQICPSYLVLYGSGL-TEGIALSETLNLPNRIIPNFLVGCSVLSSR-----QPAGIAGFGRGKTSL- 236 (465)
Q Consensus 164 ~c~~~~~~~~~~c~~~C~~~~~~Yg~g~-~~G~~~~D~v~~~~~~i~~~~fg~~~~~~~-----~~~GilGLg~~~~sl- 236 (465)
| .|.+.|++|+ +.|.+++|+|+|++..++++.|||++.... ..+||||||++..+.
T Consensus 71 ----------------~-~~~i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~ 133 (325)
T 2apr_A 71 ----------------R-TWSISYGDGSSASGILAKDNVNLGGLLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTV 133 (325)
T ss_dssp ----------------E-EEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSS
T ss_pred ----------------C-EEEEEECCCCCEEEEEEEEEEEECCEEECcEEEEEEeccCcccccCCCceEEEeCCcccccc
Confidence 2 8999999998 899999999999999999999999985432 259999999987653
Q ss_pred ------cc----c--cCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCCcceeEEEEe
Q 012359 237 ------PS----Q--LNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSVYYYVGL 304 (465)
Q Consensus 237 ------~~----q--l~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~~~w~v~l 304 (465)
+. | +..++||+||.+.. ....|.|+|||+|+++ +.|++.|+|+.+. ..+|.|.+
T Consensus 134 ~~~~~~~~~l~~qg~i~~~~FS~~l~~~~----~~~~G~l~fGg~d~~~-~~g~l~~~p~~~~---------~~~~~v~l 199 (325)
T 2apr_A 134 RGVKTPMDNLISQGLISRPIFGVYLGKAK----NGGGGEYIFGGYDSTK-FKGSLTTVPIDNS---------RGWWGITV 199 (325)
T ss_dssp TTCCCHHHHHHHTTSCSSSEEEEEECCGG----GTCCEEEEETCCCGGG-BCSCCEEEECBCT---------TSSCEEEE
T ss_pred cCCCCHHHHHHhcCCCCCceEEEEecCCC----CCCCCEEEEccCCchh-ccCceEEEEccCC---------CCEEEEEE
Confidence 22 3 45689999997531 2357999999999998 9999999999753 46899999
Q ss_pred eEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCCCCCCccccCC
Q 012359 305 RRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLRPCFDVPG 384 (465)
Q Consensus 305 ~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 384 (465)
++|+|++ .+. .....+||||||++++||+++|++|++++.+.+.. .+.|.++|+.
T Consensus 200 ~~i~vg~-~~~----------~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~-----------~g~~~~~C~~--- 254 (325)
T 2apr_A 200 DRATVGT-STV----------ASSFDGILDTGTTLLILPNNIAASVARAYGASDNG-----------DGTYTISCDT--- 254 (325)
T ss_dssp CEEEETT-EEE----------ECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECS-----------SSCEEECSCG---
T ss_pred eEEEECC-Eec----------CCCceEEEecCCccEECCHHHHHHHHHHHhcccCC-----------CCeEEEECCC---
Confidence 9999999 332 12367999999999999999999999988665431 1456789973
Q ss_pred CCCccCCeEEEEEcCCcEEEecCCCeEEEecCCCeEEEEEEecCCCCCCCceeecccceeeeEEEEeCCCCEEEEecCC
Q 012359 385 EKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDLRNQRLGFKQQL 463 (465)
Q Consensus 385 ~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~~~~~C~~~i~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfA~~~ 463 (465)
..+|+|+|+| +|.+++||+++|+++.. +..|+..+...+ .+.||||++|||++|+|||++++|||||++.
T Consensus 255 ---~~~p~i~f~f-~g~~~~ip~~~~~~~~~--~~~C~~~i~~~~---~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 255 ---SAFKPLVFSI-NGASFQVSPDSLVFEEF--QGQCIAGFGYGN---WGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp ---GGCCCEEEEE-TTEEEEECGGGGEEEEE--TTEEEESEEEES---SSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ---CCCCcEEEEE-CCEEEEECHHHEEEcCC--CCeEEEEEEcCC---CCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 3589999999 67799999999998754 568998876532 4579999999999999999999999999874
No 22
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.2e-56 Score=442.62 Aligned_cols=303 Identities=23% Similarity=0.364 Sum_probs=253.1
Q ss_pred eeeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCC---CCCCCCCCCCCCCCCCCCCCcccccCCCccCC
Q 012359 77 TTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHY---QCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCS 153 (465)
Q Consensus 77 ~~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~---~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~ 153 (465)
+..||.+. ++.|+++|.||||||+++|+|||||+++||++.+ . .|..|. .++.|||++|+||+..+|
T Consensus 3 i~~~l~~~-~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~-~~C~~~~~C~--~~~~y~~~~SsT~~~~~~------ 72 (339)
T 3fv3_A 3 ISLSLINE-GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSN-AQCGKGVDCK--SSGTFTPSSSSSYKNLGA------ 72 (339)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEE-EEECTTCCTT--TTCCBCGGGCTTCEEEEE------
T ss_pred eeeEEEcC-CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCC-CCCCCCCCCC--CCCcCCCccCcceeeCCc------
Confidence 56677775 4799999999999999999999999999999541 0 444555 478999999999998762
Q ss_pred CCccCCCCCCCCCCCCccCCCCCccCCCceeEecCCc-eEEEeEEEEEEEcCCcccccEEEeceecCCCCCCcccccCCC
Q 012359 154 WIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSG-LTEGIALSETLNLPNRIIPNFLVGCSVLSSRQPAGIAGFGRG 232 (465)
Q Consensus 154 ~~~~~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g-~~~G~~~~D~v~~~~~~i~~~~fg~~~~~~~~~~GilGLg~~ 232 (465)
.|.+.|++| .+.|.+++|+|+|++..++++.|||++.... .+||||||++
T Consensus 73 ----------------------------~~~i~Yg~gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~-~~GilGLg~~ 123 (339)
T 3fv3_A 73 ----------------------------AFTIRYGDGSTSQGTWGKDTVTINGVSITGQQIADVTQTSV-DQGILGIGYT 123 (339)
T ss_dssp ----------------------------EEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEESS-SSCEEECSCG
T ss_pred ----------------------------eEEEEECCCceEEEEEEEEEEEECCEEECceEEEEEEecCC-CceeEEecCc
Confidence 899999999 5999999999999999999999999987654 4999999997
Q ss_pred CCC----------------ccccc------CCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcc
Q 012359 233 KTS----------------LPSQL------NLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSV 290 (465)
Q Consensus 233 ~~s----------------l~~ql------~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~ 290 (465)
..+ ++.|| ..++||+||.+. ....|.|+|||+|+++ +.|++.|+|+..
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~-----~~~~G~l~fGg~d~~~-~~g~l~~~p~~~---- 193 (339)
T 3fv3_A 124 SNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSP-----SAETGTIIFGGVDNAK-YSGKLVAEQVTS---- 193 (339)
T ss_dssp GGCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCT-----TCSEEEEEETEEETTS-BSSCCEEEEBCC----
T ss_pred cccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCC-----CCCCeEEEEeeechHH-eecceEEEeccc----
Confidence 653 33343 347999999863 2358999999999998 999999999987
Q ss_pred cccCCcceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhccccccccccc
Q 012359 291 AERNAFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGA 370 (465)
Q Consensus 291 ~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~ 370 (465)
..+|.|++++|+|+++.+... ..++|||||++++||++++++|++++.+.... ...
T Consensus 194 ------~~~~~v~l~~i~v~g~~~~~~-----------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~-------~~~ 249 (339)
T 3fv3_A 194 ------SQALTISLASVNLKGSSFSFG-----------DGALLDSGTTLTYFPSDFAAQLADKAGARLVQ-------VAR 249 (339)
T ss_dssp ------SSSCEEEEEEEEESSCEEEEE-----------EEEEECTTBSSEEECHHHHHHHHHHHTCEEEE-------EET
T ss_pred ------CccEEEEEEEEEECCEeecCC-----------ccEEEeCCCCCEecCHHHHHHHHHHcCCEEcc-------ccc
Confidence 468999999999999987532 56999999999999999999999998754330 001
Q ss_pred ccCCCCCCccccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecCCCeEEEEEEecCCCCCCCceeecccceeeeEEEE
Q 012359 371 EALTGLRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREASGGPSIILGNFQMQNYYVEY 450 (465)
Q Consensus 371 ~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~~~~~C~~~i~~~~~~~~~~~ILG~~fl~~~y~vf 450 (465)
..+.|.++|+. ..+|.|+|+|.+|++|+||+++|+++.. +..|+..+.. .+.||||++|||++|+||
T Consensus 250 ~~~~~~~~C~~------~~~p~i~f~f~~g~~~~v~~~~~~~~~~--~~~C~~~i~~-----~~~~ilG~~fl~~~y~vf 316 (339)
T 3fv3_A 250 DQYLYFIDCNT------DTSGTTVFNFGNGAKITVPNTEYVYQNG--DGTCLWGIQP-----SDDTILGDNFLRHAYLLY 316 (339)
T ss_dssp TEEEEEECTTC------CCCSEEEEEETTSCEEEEEGGGGEEECS--SSCEEESEEE-----CSSCEECHHHHTTEEEEE
T ss_pred cCceEEEecCC------CCCCcEEEEECCCCEEEECHHHheeeCC--CCeEEEEEEe-----CCcEEeChHHHhCEEEEE
Confidence 24457789974 3579999999558999999999999863 4679877765 246999999999999999
Q ss_pred eCCCCEEEEecCCCC
Q 012359 451 DLRNQRLGFKQQLCK 465 (465)
Q Consensus 451 D~~~~~iGfA~~~C~ 465 (465)
|++++|||||+++|+
T Consensus 317 D~~~~~igfA~~~~~ 331 (339)
T 3fv3_A 317 NLDANTISIAQVKYT 331 (339)
T ss_dssp ETTTTEEEEEEBCCC
T ss_pred ECCCCEEEEEecCCC
Confidence 999999999999995
No 23
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.1e-56 Score=440.43 Aligned_cols=301 Identities=14% Similarity=0.249 Sum_probs=254.7
Q ss_pred ceeeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCC--CCCCCCCCCCCCCCCCCcccccCCCccCC
Q 012359 76 TTTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCK--YCSSSKIPSFIPKLSSSSRLLGCQNPKCS 153 (465)
Q Consensus 76 ~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~--~C~~~~~~~y~p~~SsT~~~~~c~~~~c~ 153 (465)
++..+|.+..+..|+++|.|| ||+++|+|||||+++||+|. .|. .|.+..++.|||++| ||+..+
T Consensus 6 ~~~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~---~C~~~~C~~~~~~~y~~~~S-T~~~~~------- 72 (330)
T 1yg9_A 6 PLYKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQ---ECVGGACVCPNLQKYEKLKP-KYISDG------- 72 (330)
T ss_dssp CSCSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECT---TCCSGGGGSTTCCCCCCSSC-EEEEEE-------
T ss_pred eeEeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecC---CCCCccCcccccCccCCCCC-ceEECC-------
Confidence 455778888888999999999 89999999999999999999 997 574455899999999 998764
Q ss_pred CCccCCCCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCCcccccEEEeceecCCC-----CCCcccc
Q 012359 154 WIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSSR-----QPAGIAG 228 (465)
Q Consensus 154 ~~~~~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~~~i~~~~fg~~~~~~~-----~~~GilG 228 (465)
. .|.+.|++|++.|.+++|+|++++..++++.|||++.... ..+||||
T Consensus 73 -------------~--------------~~~i~Yg~Gs~~G~~~~Dtv~ig~~~~~~~~fg~~~~~~~~f~~~~~~GilG 125 (330)
T 1yg9_A 73 -------------N--------------VQVKFFDTGSAVGRGIEDSLTISQLTTSQQDIVLADELSQEVCILSADVVVG 125 (330)
T ss_dssp -------------E--------------EEEEETTTEEEEEEEEEEEEEETTEEEEEEEEEEEEEECTHHHHTTCSEEEE
T ss_pred -------------C--------------EEEEEECCceEEEEEEEEEEEECCEEEcCeEEEEEEEcccccccccCceEEE
Confidence 1 8999999999999999999999999999999999986531 3499999
Q ss_pred cCCCCCC-----------cccc--cCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCC
Q 012359 229 FGRGKTS-----------LPSQ--LNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNA 295 (465)
Q Consensus 229 Lg~~~~s-----------l~~q--l~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~ 295 (465)
||++..+ +.+| + .++||+||.+.. .....|.|+|||+|+++ +.|++.|+|+..
T Consensus 126 Lg~~~~s~~~~~~~~~~~l~~qg~i-~~~FS~~l~~~~---~~~~~G~l~fGg~d~~~-~~g~l~~~p~~~--------- 191 (330)
T 1yg9_A 126 IAAPGCPNALKGKTVLENFVEENLI-APVFSIHHARFQ---DGEHFGEIIFGGSDWKY-VDGEFTYVPLVG--------- 191 (330)
T ss_dssp CSCTTSCCTTSCCCHHHHHHHTTSS-CSEEEEEEEECT---TSCEEEEEEETSCCGGG-EEEEEEEEEBSC---------
T ss_pred cCcchhccccCCCCHHHHHHhcCCC-CceEEEEEcCCC---CCCCCCEEEECCcCHHH-ccCceEEEECCC---------
Confidence 9998876 2233 4 689999998741 12248999999999998 899999999985
Q ss_pred cceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccC--
Q 012359 296 FSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEAL-- 373 (465)
Q Consensus 296 ~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~-- 373 (465)
..+|.|.|++|+|+++.+. .....+||||||++++||++++++|++++.+... ..+
T Consensus 192 -~~~w~v~l~~i~v~~~~~~----------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-----------~~g~~ 249 (330)
T 1yg9_A 192 -DDSWKFRLDGVKIGDTTVA----------PAGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVE-----------KTTTR 249 (330)
T ss_dssp -TTSCCEECSEEEETTEEEE----------CTTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEE-----------ECSSC
T ss_pred -CCEEEEEeCeEEECCEEEc----------CCCcEEEEecCCccccCCHHHHHHHHHHhCCccc-----------CCCce
Confidence 5799999999999998764 2247799999999999999999999998854321 123
Q ss_pred CC-CCCccccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecCCCeEEEEEEecCCCCCCCceeecccceeeeEEEEeC
Q 012359 374 TG-LRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDL 452 (465)
Q Consensus 374 ~~-~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~~~~~C~~~i~~~~~~~~~~~ILG~~fl~~~y~vfD~ 452 (465)
.| .++|+.. ..+|+|+|+| ||++|+|++++|+++. +..|+..+... ..++.||||++|||++|+|||+
T Consensus 250 ~~~~~~C~~~-----~~~p~i~f~f-gg~~~~l~~~~y~~~~---~~~C~~~i~~~--~~~~~~ilG~~fl~~~y~vfD~ 318 (330)
T 1yg9_A 250 RICKLDCSKI-----PSLPDVTFVI-NGRNFNISSQYYIQQN---GNLCYSGFQPC--GHSDHFFIGDFFVDHYYSEFNW 318 (330)
T ss_dssp EEEEECGGGG-----GGSCCEEEEE-TTEEEEECHHHHEEEE---TTEEEESEEEE--TTCSSEEECHHHHTTEEEEEET
T ss_pred EEEEEECCCc-----cccCcEEEEE-CCEEEEECHHHhcccC---CCcEEEEEEeC--CCCCeEEecHHHhhheEEEEEC
Confidence 46 7889865 6789999999 8999999999999987 45899877653 2345799999999999999999
Q ss_pred CCCEEEEecCC
Q 012359 453 RNQRLGFKQQL 463 (465)
Q Consensus 453 ~~~~iGfA~~~ 463 (465)
+++|||||+++
T Consensus 319 ~~~riGfA~~~ 329 (330)
T 1yg9_A 319 ENKTMGFGRSV 329 (330)
T ss_dssp TTTEEEEEEEC
T ss_pred CCCEEEEEECC
Confidence 99999999874
No 24
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.2e-56 Score=443.01 Aligned_cols=306 Identities=21% Similarity=0.342 Sum_probs=249.1
Q ss_pred eeeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCC-------CCCCCCCCCCCCCCCcccccCCC
Q 012359 77 TTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYC-------SSSKIPSFIPKLSSSSRLLGCQN 149 (465)
Q Consensus 77 ~~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C-------~~~~~~~y~p~~SsT~~~~~c~~ 149 (465)
+.+++.+. ++.|+++|.||||||+++|+|||||+++||++.+. .|..| .|..++.|||++|+||+..+|
T Consensus 3 v~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~-~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~-- 78 (342)
T 3pvk_A 3 VPVTLHNE-QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNV-DCQVTYSDQTADFCKQKGTYDPSGSSASQDLNT-- 78 (342)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEE-EECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEE--
T ss_pred cceEEecC-CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCC-CCcccccccccCCCCCCCcCCCccCcceeecCC--
Confidence 45667664 58999999999999999999999999999987610 16432 122478999999999998762
Q ss_pred ccCCCCccCCCCCCCCCCCCccCCCCCccCCCceeEecCCce-EEEeEEEEEEEcCCcccccEEEeceecCCCCCCcccc
Q 012359 150 PKCSWIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGL-TEGIALSETLNLPNRIIPNFLVGCSVLSSRQPAGIAG 228 (465)
Q Consensus 150 ~~c~~~~~~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~-~~G~~~~D~v~~~~~~i~~~~fg~~~~~~~~~~GilG 228 (465)
.|.+.|++|+ +.|.+++|+|+|++..++++.|||++... ..+||||
T Consensus 79 --------------------------------~~~i~Yg~gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~-~~~GilG 125 (342)
T 3pvk_A 79 --------------------------------PFKIGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS-IDQGILG 125 (342)
T ss_dssp --------------------------------EEEEECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-SSSCEEE
T ss_pred --------------------------------eEEEEecCCCeEEEEEEEEEEEECCEEecceEEEEEEccC-CCccEEE
Confidence 8999999998 99999999999999999999999998765 3499999
Q ss_pred cCCCCC-------Cccccc------CCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCC
Q 012359 229 FGRGKT-------SLPSQL------NLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNA 295 (465)
Q Consensus 229 Lg~~~~-------sl~~ql------~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~ 295 (465)
||++.. +++.|| ..++||+||.+. ....|.|+|||+|+++ +.|++.|+|+..
T Consensus 126 Lg~~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~-----~~~~G~l~fGg~d~~~-~~g~l~~~p~~~--------- 190 (342)
T 3pvk_A 126 VGYKTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSP-----DAATGQIIFGGVDNAK-YSGSLIALPVTS--------- 190 (342)
T ss_dssp CSCGGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCT-----TCSEEEEEETEEETTS-BSSCCEEEECCC---------
T ss_pred ecCccccccccCCcHHHHHHhcCCCCCceEEEEeCCC-----CCCCcEEEECccCccc-eeeeeEEeecCc---------
Confidence 999863 444443 347999999763 2357999999999998 999999999987
Q ss_pred cceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCCC
Q 012359 296 FSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTG 375 (465)
Q Consensus 296 ~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 375 (465)
..+|.|.+++|+|+++.+..+ ...++|||||++++||++++++|++++.+.... .....+.|
T Consensus 191 -~~~~~v~l~~i~v~g~~~~~~----------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~-------~~~~~~~~ 252 (342)
T 3pvk_A 191 -DRELRISLGSVEVSGKTINTD----------NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQ-------DSNGNSFY 252 (342)
T ss_dssp -SSSCEEEEEEEEETTEEEEEE----------EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEE-------CTTSCEEE
T ss_pred -cceEEEEEeEEEECCEEecCC----------CceEEEeCCCCCeecCHHHHHHHHHHcCCeecc-------cCCCceEE
Confidence 458999999999999988642 256999999999999999999999988665431 01112237
Q ss_pred CCCccccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecC-C---CeEEEEEEecCCCCCCCceeecccceeeeEEEEe
Q 012359 376 LRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGE-G---SAVCLTVVTDREASGGPSIILGNFQMQNYYVEYD 451 (465)
Q Consensus 376 ~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~-~---~~~C~~~i~~~~~~~~~~~ILG~~fl~~~y~vfD 451 (465)
.++|+ ..|.|+|+|.+|.+++||+++|+++... . ...|+..+.. .+.||||++|||++|+|||
T Consensus 253 ~~~C~--------~~p~i~f~f~~g~~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~-----~~~~ilG~~fl~~~y~vfD 319 (342)
T 3pvk_A 253 EVDCN--------LSGDVVFNFSKNAKISVPASEFAASLQGDDGQPYDKCQLLFDV-----NDANILGDNFLRSAYIVYD 319 (342)
T ss_dssp EECSC--------CCSEEEEEESTTCEEEEEGGGGEEC----------CEEESEEE-----CTTCEECHHHHTTEEEEEE
T ss_pred EEecC--------CCCceEEEECCCCEEEEcHHHheeeccccCCCcCCeeEEEEee-----CCCeEeCHHHHhcEEEEEE
Confidence 78995 4599999995489999999999987322 1 2679988865 2469999999999999999
Q ss_pred CCCCEEEEecCCCC
Q 012359 452 LRNQRLGFKQQLCK 465 (465)
Q Consensus 452 ~~~~~iGfA~~~C~ 465 (465)
++++|||||+++|+
T Consensus 320 ~~~~~igfA~~~~~ 333 (342)
T 3pvk_A 320 LDDNEISLAQVKYT 333 (342)
T ss_dssp TTTTEEEEEEBCCC
T ss_pred CCCCEEEEEecCCC
Confidence 99999999999995
No 25
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=8.7e-56 Score=433.30 Aligned_cols=293 Identities=20% Similarity=0.278 Sum_probs=245.7
Q ss_pred CcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCCccCCCCCCC
Q 012359 85 SYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHHESIQCRD 164 (465)
Q Consensus 85 ~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~~~~~~~c~~ 164 (465)
.+..|+++|.|| +|+++|+|||||+++||+|. .|..|.++.++.|||++|+ ++...
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~---~C~~~~c~~~~~y~~~~Ss-~~~~~------------------ 67 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSD---ELPSSEQTGHDLYTPSSSA-TKLSG------------------ 67 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECT---TSCHHHHTTSCCCBCCSSC-EECTT------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeC---CCCccccCCCCCCCchhcC-CccCC------------------
Confidence 467899999999 99999999999999999999 9999887778999999998 54322
Q ss_pred CCCCCccCCCCCccCCCceeEecCCce-EEEeEEEEEEEcCCcccccEEEeceecCC------CCCCcccccCCCCCCc-
Q 012359 165 CNDEPLATSKNCTQICPSYLVLYGSGL-TEGIALSETLNLPNRIIPNFLVGCSVLSS------RQPAGIAGFGRGKTSL- 236 (465)
Q Consensus 165 c~~~~~~~~~~c~~~C~~~~~~Yg~g~-~~G~~~~D~v~~~~~~i~~~~fg~~~~~~------~~~~GilGLg~~~~sl- 236 (465)
| .|.+.|++|+ +.|.+++|+|+|++..++++.|||++... ...+||||||++..+.
T Consensus 68 ---------------~-~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 131 (325)
T 1ibq_A 68 ---------------Y-SWDISYGDGSSASGDVYRDTVTVGGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTV 131 (325)
T ss_dssp ---------------C-BEEEECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCC
T ss_pred ---------------C-EEEEEeCCCCEEEEEEEEeEEEECCEEEcceEEEEEEecCccccccCCCceEEEeCccccccc
Confidence 2 8999999998 89999999999999999999999998643 2459999999976553
Q ss_pred ------------ccccCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCCcceeEEEEe
Q 012359 237 ------------PSQLNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSVYYYVGL 304 (465)
Q Consensus 237 ------------~~ql~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~~~w~v~l 304 (465)
.+|+..++||+||.+. ..|.|+|||+|+++ +.|++.|+|+.+. ..+|.|+|
T Consensus 132 ~p~~~~~~~~~l~~~i~~~~FS~~l~~~-------~~G~l~fGg~d~~~-~~g~l~~~p~~~~---------~~~w~v~l 194 (325)
T 1ibq_A 132 QPKAQTTFFDTVKSQLDSPLFAVQLKHD-------APGVYDFGYIDDSK-YTGSITYTDADSS---------QGYWGFST 194 (325)
T ss_dssp BSSCCCCHHHHHGGGSSSSEEEEEEETT-------EEEEEEESSCCGGG-BSSCCEEEECBCT---------TSSCEEEE
T ss_pred CcCCCCCHHHHHHHhcCCcEEEEEecCC-------CCceEEECCcChhh-ccCceEEEEcCCC---------CceEEEEE
Confidence 2455669999999762 58999999999998 9999999999752 46899999
Q ss_pred eEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCCCCCCccccCC
Q 012359 305 RRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLRPCFDVPG 384 (465)
Q Consensus 305 ~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 384 (465)
++|+|+++.+. .....+||||||++++||++++++|++++.+... ....+.|.++|+
T Consensus 195 ~~i~v~~~~~~----------~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~---------~~~~g~~~~~C~---- 251 (325)
T 1ibq_A 195 DGYSIGDGSSS----------SSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQE---------SYEAGGYVFSCS---- 251 (325)
T ss_dssp CEEEETTSCCB----------SCCEEEEECTTCCSEEECHHHHHHHHTTSTTCBC---------CSSSSSCEEETT----
T ss_pred CcEEECCeecc----------CCCceEEEeCCCCcEeCCHHHHHHHHHhCCCceE---------cCcCCeEEEEcC----
Confidence 99999997653 2346799999999999999999999887633211 122345778997
Q ss_pred CCCccCCeEEEEEcCCcEEEecCCCeEEEecC-CCeEEEEEEecCCCCCCCceeecccceeeeEEEEeCCCCEEEEecCC
Q 012359 385 EKTGSFPELKLHFKGGAEVTLPVENYFAVVGE-GSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDLRNQRLGFKQQL 463 (465)
Q Consensus 385 ~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~-~~~~C~~~i~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfA~~~ 463 (465)
..+|+|+|+| ||++|+||+++|+++... +...|++.+...+ ..+.||||++|||++|+|||++++|||||++.
T Consensus 252 ---~~~P~i~f~f-gg~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~--~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 252 ---TDLPDFTVVI-GDYKAVVPGKYINYAPVSTGSSTCYGGIQSNS--GLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp ---CCCCCEEEEE-TTEEEEECHHHHEEEESSTTCSEEEESEEECT--TTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ---CCCCcEEEEE-CCEEEEECHHHhcccccCCCCCeEEEEEEcCC--CCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 4689999999 899999999999987643 3479998776532 34579999999999999999999999999874
No 26
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.1e-55 Score=432.11 Aligned_cols=291 Identities=19% Similarity=0.253 Sum_probs=244.7
Q ss_pred CcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCCccCCCCCCC
Q 012359 85 SYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHHESIQCRD 164 (465)
Q Consensus 85 ~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~~~~~~~c~~ 164 (465)
.+..|+++|.|| ||+++|+|||||+++||+|. .|..|.++.++.|||++|+ ++...
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~---~C~~~~c~~~~~y~~~~Ss-~~~~~------------------ 68 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSS---QTPSSERSGHDYYTPGSSA-QKIDG------------------ 68 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBT---TSCHHHHTTCCCBCCCTTC-EEEEE------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecC---CCCcccccCCCCCCccccC-CccCC------------------
Confidence 467899999999 89999999999999999999 9999877778999999998 54322
Q ss_pred CCCCCccCCCCCccCCCceeEecCCce-EEEeEEEEEEEcCCcccccEEEeceecCC------CCCCcccccCCCCCCcc
Q 012359 165 CNDEPLATSKNCTQICPSYLVLYGSGL-TEGIALSETLNLPNRIIPNFLVGCSVLSS------RQPAGIAGFGRGKTSLP 237 (465)
Q Consensus 165 c~~~~~~~~~~c~~~C~~~~~~Yg~g~-~~G~~~~D~v~~~~~~i~~~~fg~~~~~~------~~~~GilGLg~~~~sl~ 237 (465)
| .|.+.|++|+ +.|.+++|+|+|++.+++++.|||++... ...+||||||++.++..
T Consensus 69 ---------------~-~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 132 (323)
T 1izd_A 69 ---------------A-TWSISYGDGSSASGDVYKDKVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTV 132 (323)
T ss_dssp ---------------E-EEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCC
T ss_pred ---------------C-eEEEEcCCCCeEEEEEEEEEEEECCEEECceEEEEEEeccccccccCCCceEEecCccccccc
Confidence 2 8999999998 89999999999999999999999998643 34599999999876542
Q ss_pred -------------cccCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCCcceeEEEEe
Q 012359 238 -------------SQLNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSVYYYVGL 304 (465)
Q Consensus 238 -------------~ql~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~~~w~v~l 304 (465)
+|+..++||+||.+. ..|.|+|||+|+++ +.|++.|+|+.+. ..+|.|.+
T Consensus 133 ~p~~~~~~~~~l~~~i~~~~FS~~L~~~-------~~G~l~fGg~d~~~-~~g~l~~~p~~~~---------~~~w~v~l 195 (323)
T 1izd_A 133 QPTPQKTFFDNVKSSLSEPIFAVALKHN-------APGVYDFGYTDSSK-YTGSITYTDVDNS---------QGFWGFTA 195 (323)
T ss_dssp BSSCCCCHHHHHGGGSSSSEEEEECCTT-------SCEEEEESSCCTTS-EEEEEEEEECBCT---------TSSCEEEE
T ss_pred CCCCCCCHHHHHHHhccCcEEEEEccCC-------CCCEEEECCcCccc-cccceEEEECCCC---------CceEEEEE
Confidence 456679999999752 47999999999998 9999999999752 47899999
Q ss_pred eEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCCCCCCccccCC
Q 012359 305 RRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLRPCFDVPG 384 (465)
Q Consensus 305 ~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 384 (465)
++|+|++ .+. .....+||||||++++||++++++|.+++.+... ....+.|.++|+
T Consensus 196 ~~i~v~~-~~~----------~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~~---------~~~~g~~~~~C~---- 251 (323)
T 1izd_A 196 DGYSIGS-DSS----------SDSITGIADTGTTLLLLDDSIVDAYYEQVNGASY---------DSSQGGYVFPSS---- 251 (323)
T ss_dssp SEEEETT-EEE----------CCCEEEEECTTCCSEEECHHHHHHHHTTSTTCEE---------ETTTTEEEEETT----
T ss_pred CeEEECC-ccc----------CCCceEEEeCCCcceeCCHHHHHHHHHhCCCcEE---------cCcCCEEEEECC----
Confidence 9999999 442 2346799999999999999999999887642211 112345678897
Q ss_pred CCCccCCeEEEEEcCCcEEEecCCCeEEEecCCCeEEEEEEecCCCCCCCceeecccceeeeEEEEeCCCCEEEEecCC
Q 012359 385 EKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDLRNQRLGFKQQL 463 (465)
Q Consensus 385 ~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~~~~~C~~~i~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfA~~~ 463 (465)
..+|+|+|+| ||++|+||+++|+++... +..|++.+...+ ..+.||||++|||++|+|||++++|||||++.
T Consensus 252 ---~~~P~i~f~f-gg~~~~i~~~~~~~~~~~-~~~C~~~i~~~~--~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 252 ---ASLPDFSVTI-GDYTATVPGEYISFADVG-NGQTFGGIQSNS--GIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp ---CCCCCEEEEE-TTEEEEECHHHHEEEECS-TTEEEESEEECT--TTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ---CCCceEEEEE-CCEEEecCHHHeEEecCC-CCeEEEEEEcCC--CCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 4689999999 899999999999987643 678998776532 34579999999999999999999999999863
No 27
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=6.9e-56 Score=433.62 Aligned_cols=291 Identities=19% Similarity=0.273 Sum_probs=244.1
Q ss_pred CcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCCccCCCCCCC
Q 012359 85 SYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHHESIQCRD 164 (465)
Q Consensus 85 ~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~~~~~~~c~~ 164 (465)
.+..|+++|.|| ||++.|+|||||+++||+|. .|..|.++.++.|||++|+ ++...
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~---~C~~~~c~~~~~y~~~~Ss-~~~~~------------------ 68 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFST---ELPASQQSGHSVYNPSATG-KELSG------------------ 68 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBT---TSCHHHHTTSCCBCHHHHC-EEEEE------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecC---CCCchhccCCCCCCcccCC-cccCC------------------
Confidence 467899999999 99999999999999999999 9999887789999999998 55332
Q ss_pred CCCCCccCCCCCccCCCceeEecCCce-EEEeEEEEEEEcCCcccccEEEeceecCC------CCCCcccccCCCCCCcc
Q 012359 165 CNDEPLATSKNCTQICPSYLVLYGSGL-TEGIALSETLNLPNRIIPNFLVGCSVLSS------RQPAGIAGFGRGKTSLP 237 (465)
Q Consensus 165 c~~~~~~~~~~c~~~C~~~~~~Yg~g~-~~G~~~~D~v~~~~~~i~~~~fg~~~~~~------~~~~GilGLg~~~~sl~ 237 (465)
| .|.+.|++|+ +.|.+++|+|+|++..++++.|||++... ...+||||||++..+..
T Consensus 69 ---------------~-~~~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 132 (323)
T 1bxo_A 69 ---------------Y-TWSISYGDGSSASGNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTV 132 (323)
T ss_dssp ---------------E-EEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCC
T ss_pred ---------------C-eEEEEeCCCCeEEEEEEEEEEEECCEEECcEEEEEEEecCcccccCCCCceEEEeCccccccc
Confidence 2 8999999998 89999999999999999999999998643 34599999999765542
Q ss_pred -------------cccCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCCcceeEEEEe
Q 012359 238 -------------SQLNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSVYYYVGL 304 (465)
Q Consensus 238 -------------~ql~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~~~w~v~l 304 (465)
+|+..++||+||.+. ..|.|+|||+|+++ +.|++.|+|+.+. ..+|.|+|
T Consensus 133 ~~~~~~~~~~~l~~~i~~~~FS~~L~~~-------~~G~l~fGg~d~~~-~~g~l~~~p~~~~---------~~~w~v~l 195 (323)
T 1bxo_A 133 QPQSQTTFFDTVKSSLAQPLFAVALKHQ-------QPGVYDFGFIDSSK-YTGSLTYTGVDNS---------QGFWSFNV 195 (323)
T ss_dssp BSSCCCCHHHHHGGGBSSSEEEEECCSS-------SCEEEEESSCCGGG-BSSCCEEEECBCT---------TSSCEEEE
T ss_pred ccCCCCCHHHHHHHhcCCcEEEEEEeCC-------CCceEEEeCcChhh-ccCceEEEECCCC---------CCeEEEEE
Confidence 456679999999752 47999999999998 9999999999753 46899999
Q ss_pred eEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCCCCCCccccCC
Q 012359 305 RRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLRPCFDVPG 384 (465)
Q Consensus 305 ~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 384 (465)
++|+|++ .. .....+||||||++++||++++++|++++..... ....+.|.++|+
T Consensus 196 ~~i~v~~-~~-----------~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~---------~~~~g~~~~~C~---- 250 (323)
T 1bxo_A 196 DSYTAGS-QS-----------GDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQ---------DSNAGGYVFDCS---- 250 (323)
T ss_dssp EEEEETT-EE-----------EEEEEEEECTTCSSEEECHHHHHHHHTTSTTCEE---------ETTTTEEEECTT----
T ss_pred eeEEECC-cc-----------CCCceEEEeCCCCceeCCHHHHHHHHHhCCCceE---------cCcCCEEEEECC----
Confidence 9999999 21 1126799999999999999999999887733211 112345678897
Q ss_pred CCCccCCeEEEEEcCCcEEEecCCCeEEEecCCCeEEEEEEecCCCCCCCceeecccceeeeEEEEeCCCCEEEEecCC
Q 012359 385 EKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDLRNQRLGFKQQL 463 (465)
Q Consensus 385 ~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~~~~~C~~~i~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfA~~~ 463 (465)
..+|+|+|+| ||++|+||+++|+++...+...|+..+...+ ..+.||||++|||++|+|||++++|||||++.
T Consensus 251 ---~~~P~i~f~f-gg~~~~l~~~~~~~~~~~~~~~C~~~i~~~~--~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 251 ---TNLPDFSVSI-SGYTATVPGSLINYGPSGDGSTCLGGIQSNS--GIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp ---CCCCCEEEEE-TTEEEEECHHHHEEEECSSSSCEEESEEECT--TCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ---CCCceEEEEE-CCEEEEECHHHeEEeccCCCCeEEEEEECCC--CCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 4689999999 8999999999999876443478999776532 34579999999999999999999999999873
No 28
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.1e-54 Score=444.36 Aligned_cols=322 Identities=24% Similarity=0.341 Sum_probs=250.6
Q ss_pred ecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCCccCC
Q 012359 80 NISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHHES 159 (465)
Q Consensus 80 ~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~~~~~ 159 (465)
++....+..|+++|.||||||+++|+|||||+++||+|. .| |. .++.|||++|+||+...|
T Consensus 67 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~---~c--c~--~~~~y~~~~SsT~~~~~~------------ 127 (455)
T 3lpj_A 67 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA---PH--PF--LHRYYQRQLSSTYRDLRK------------ 127 (455)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECS---CC--TT--CSCCCCGGGCTTCEEEEE------------
T ss_pred cccCCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecc---cc--cc--cCCcccCCCCCCcccCCc------------
Confidence 344445568999999999999999999999999999999 77 43 378999999999998751
Q ss_pred CCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCC-cccc-cEEEeceecCC------CCCCcccccCC
Q 012359 160 IQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPN-RIIP-NFLVGCSVLSS------RQPAGIAGFGR 231 (465)
Q Consensus 160 ~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~-~~i~-~~~fg~~~~~~------~~~~GilGLg~ 231 (465)
.|.+.|++|++.|.+++|+|+|++ ..++ .+.|+++.... ...+||||||+
T Consensus 128 ----------------------~~~i~Yg~Gs~~G~~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~ 185 (455)
T 3lpj_A 128 ----------------------GVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAY 185 (455)
T ss_dssp ----------------------EEEEECSSCEEEEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSC
T ss_pred ----------------------cEEEEeCCeEEEEEEEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCc
Confidence 899999999999999999999984 3333 35688776432 23499999999
Q ss_pred CCCCcc------------cccCC-CeeeeecCCCCCCC-----CCCccceEEecCCCCCCcCCCCeeeeccccCCccccc
Q 012359 232 GKTSLP------------SQLNL-DKFSYCLLSHKFDD-----TTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAER 293 (465)
Q Consensus 232 ~~~sl~------------~ql~~-~~Fs~~l~~~~~~~-----~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~ 293 (465)
+.++.+ .|... ++||+||.+..... .....|.|+|||+|+++ +.|++.|+|+..
T Consensus 186 ~~~s~~~~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~-~~g~l~~~p~~~------- 257 (455)
T 3lpj_A 186 AEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSL-YTGSLWYTPIRR------- 257 (455)
T ss_dssp GGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGG-EEEEEEEEECCS-------
T ss_pred cccccccCCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCccc-ccCceEEEecCC-------
Confidence 876532 23222 69999997632110 02357999999999998 999999999987
Q ss_pred CCcceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccC
Q 012359 294 NAFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEAL 373 (465)
Q Consensus 294 ~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~ 373 (465)
..||.|.+++|+|+++.+.++...+ ....+||||||++++||++++++|++++.+.... .........
T Consensus 258 ---~~~w~v~l~~i~v~g~~~~~~~~~~-----~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~----~~~~~~~~~ 325 (455)
T 3lpj_A 258 ---EWYYEVIIVRVEINGQDLKMDCKEY-----NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST----EKFPDGFWL 325 (455)
T ss_dssp ---BTTBBCCEEEEEETTEECCCCGGGG-----GSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTT----SCCCHHHHT
T ss_pred ---CceeEEEEeEEEECCEEcccccccc-----CCCeEEEECCCcceeCCHHHHHHHHHHhhhhccc----cccCccccc
Confidence 5799999999999999987654332 1367999999999999999999999999887541 001111112
Q ss_pred CCCCCccccCCCCCccCCeEEEEEcCCc-----EEEecCCCeEEEecCC---CeEEEEEEecCCCCCCCceeecccceee
Q 012359 374 TGLRPCFDVPGEKTGSFPELKLHFKGGA-----EVTLPVENYFAVVGEG---SAVCLTVVTDREASGGPSIILGNFQMQN 445 (465)
Q Consensus 374 ~~~~~C~~~~~~~~~~~p~i~f~f~gg~-----~~~l~~~~yi~~~~~~---~~~C~~~i~~~~~~~~~~~ILG~~fl~~ 445 (465)
.+.++|+.........+|+|+|+|.|+. +|+|++++|+.+.... ...|+++... ...+.||||++|||+
T Consensus 326 g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~---~~~~~~ILG~~fl~~ 402 (455)
T 3lpj_A 326 GEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAIS---QSSTGTVMGAVIMEG 402 (455)
T ss_dssp TCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEE---EESSCEEECHHHHTT
T ss_pred CcceecccccCCchhcCCcEEEEEcCCCcCceEEEEECHHHheEeccCCCCCCceEEEEecc---CCCCcEEEChHHhCC
Confidence 3578999875444456999999994332 5999999999987652 2589973211 123569999999999
Q ss_pred eEEEEeCCCCEEEEecCCCC
Q 012359 446 YYVEYDLRNQRLGFKQQLCK 465 (465)
Q Consensus 446 ~y~vfD~~~~~iGfA~~~C~ 465 (465)
+|+|||++++|||||+++|+
T Consensus 403 ~yvvfD~~~~rIGfA~~~c~ 422 (455)
T 3lpj_A 403 FYVVFDRARKRIGFAVSACH 422 (455)
T ss_dssp EEEEEETTTTEEEEEEETTC
T ss_pred eEEEEECCCCEEEEEecccc
Confidence 99999999999999999995
No 29
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=2.3e-54 Score=426.11 Aligned_cols=302 Identities=21% Similarity=0.322 Sum_probs=244.4
Q ss_pred eeeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCCc
Q 012359 77 TTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIH 156 (465)
Q Consensus 77 ~~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~~ 156 (465)
...||.+. +..|+++|.||||+|++.|+|||||+++||+|. +.|||++|+++..
T Consensus 3 ~~~~l~n~-~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-------------~~y~~s~Ss~~~~------------ 56 (340)
T 1wkr_A 3 GSVPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-------------KSYVKTSTSSATS------------ 56 (340)
T ss_dssp EEEEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-------------SCCCCCTTCEEEE------------
T ss_pred ccEeeecc-CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-------------CccCCcCCccccC------------
Confidence 34677776 469999999999999999999999999999875 4799988875421
Q ss_pred cCCCCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCCcccccEEEeceecCC--CCCCcccccCCCCC
Q 012359 157 HESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSS--RQPAGIAGFGRGKT 234 (465)
Q Consensus 157 ~~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~~~i~~~~fg~~~~~~--~~~~GilGLg~~~~ 234 (465)
| .|.+.|++|++.|.+++|+|+|++..++++.|||++... ...+||||||++..
T Consensus 57 -----------------------~-~~~i~Yg~Gs~~G~~~~Dtv~~g~~~v~~~~fg~~~~~~~~~~~~GilGLg~~~~ 112 (340)
T 1wkr_A 57 -----------------------D-KVSVTYGSGSFSGTEYTDTVTLGSLTIPKQSIGVASRDSGFDGVDGILGVGPVDL 112 (340)
T ss_dssp -----------------------E-EEEEECSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEESCTTCSEEEECSCGGG
T ss_pred -----------------------c-eEEEEECCcEEEEEEEEEEEEECCEEEcceEEEEEEccCCCcCCCcEEECCcccc
Confidence 2 899999999999999999999999999999999998643 23599999999776
Q ss_pred Cc--------------ccc------cCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccC
Q 012359 235 SL--------------PSQ------LNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERN 294 (465)
Q Consensus 235 sl--------------~~q------l~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~ 294 (465)
++ +.+ +..++||+||.+.. ......|.|+|||+|+++ +.|++.|+|+...+..
T Consensus 113 s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~--~~~~~~G~l~fGg~d~~~-~~g~l~~~p~~~~~~~---- 185 (340)
T 1wkr_A 113 TVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTT--SESSTNGELTFGATDSSK-YTGSITYTPITSTSPA---- 185 (340)
T ss_dssp GTTSEESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCS--SSSEEEEEEEESSCCGGG-CSSCCEEEECCSSTTG----
T ss_pred ccccccccccccCCCHHHHHHHcCCCCCCEEEEEecCCC--CCCCCCcEEEEcccChhh-cccceEEEECccCCCC----
Confidence 54 222 33589999998641 123458999999999998 9999999999885432
Q ss_pred CcceeEEEEeeEEEECC-EEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccC
Q 012359 295 AFSVYYYVGLRRITVGG-QRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEAL 373 (465)
Q Consensus 295 ~~~~~w~v~l~~i~v~~-~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~ 373 (465)
..||.|. ++|+|++ +.+.. ...+||||||++++||++++++|.+++.+... ...+
T Consensus 186 --~~~w~v~-~~i~v~~~~~l~~-----------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~----------~~~g 241 (340)
T 1wkr_A 186 --SAYWGIN-QSIRYGSSTSILS-----------STAGIVDTGTTLTLIASDAFAKYKKATGAVAD----------NNTG 241 (340)
T ss_dssp --GGSSEEE-EEEEETTTEEEEE-----------EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC----------TTTS
T ss_pred --cceEEEE-eeEEECCCeEccC-----------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc----------CCCC
Confidence 5799999 9999998 77641 14699999999999999999999877754332 2334
Q ss_pred CCCCCccccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecC------CCeEEEEEEecCCC--CCCCceeecccceee
Q 012359 374 TGLRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGE------GSAVCLTVVTDREA--SGGPSIILGNFQMQN 445 (465)
Q Consensus 374 ~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~------~~~~C~~~i~~~~~--~~~~~~ILG~~fl~~ 445 (465)
.+.++|... ..+|+|+|+| +|+.|+|+|++|+++... ....|+..+..... ..+..||||++|||+
T Consensus 242 ~~~~~C~~~-----~~~p~i~f~f-~g~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~ 315 (340)
T 1wkr_A 242 LLRLTTAQY-----ANLQSLFFTI-GGQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLER 315 (340)
T ss_dssp SEEECHHHH-----HTCCCEEEEE-TTEEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTS
T ss_pred eEEeecccc-----ccCCcEEEEE-CCEEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhh
Confidence 577899865 6789999999 899999999999986532 13578766654221 123469999999999
Q ss_pred eEEEEeCCCCEEEEecCCCC
Q 012359 446 YYVEYDLRNQRLGFKQQLCK 465 (465)
Q Consensus 446 ~y~vfD~~~~~iGfA~~~C~ 465 (465)
+|+|||++++|||||+++|+
T Consensus 316 ~y~vfD~~~~~igfA~~~~~ 335 (340)
T 1wkr_A 316 FYSVYDTTNKRLGLATTSFT 335 (340)
T ss_dssp EEEEEETTTTEEEEEECTTT
T ss_pred eEEEEeCCCCeEEEEecCCC
Confidence 99999999999999999985
No 30
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-54 Score=434.29 Aligned_cols=321 Identities=21% Similarity=0.315 Sum_probs=248.5
Q ss_pred ecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCCccCC
Q 012359 80 NISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHHES 159 (465)
Q Consensus 80 ~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~~~~~ 159 (465)
+|.+..+..|+++|.||||||+++|+|||||+++||+|. .|..| ++.|||++|+||+...|
T Consensus 6 ~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~---~c~~~----~~~f~~~~SsT~~~~~~------------ 66 (383)
T 2ewy_A 6 NLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGT---PHSYI----DTYFDTERSSTYRSKGF------------ 66 (383)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECS---CBTTB----SCCCCGGGCTTCEEEEE------------
T ss_pred eccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecC---CCCcc----ccCcccccCccceeCCc------------
Confidence 455666678999999999999999999999999999999 88776 57899999999998752
Q ss_pred CCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCCcccc--cEEEeceecCC------CCCCcccccCC
Q 012359 160 IQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIP--NFLVGCSVLSS------RQPAGIAGFGR 231 (465)
Q Consensus 160 ~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~~~i~--~~~fg~~~~~~------~~~~GilGLg~ 231 (465)
.|.+.|++|++.|.+++|+|+|++.... .+.|+++.... ...+||||||+
T Consensus 67 ----------------------~~~i~Yg~Gs~~G~~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~ 124 (383)
T 2ewy_A 67 ----------------------DVTVKYTQGSWTGFVGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAY 124 (383)
T ss_dssp ----------------------EEEEECSSCEEEEEEEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSC
T ss_pred ----------------------eEEEEECCcEEEEEEEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCc
Confidence 8999999999999999999999864322 35677765321 23499999999
Q ss_pred CCCCc------------ccccC-CCeeeeecCCCCC--CCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCCc
Q 012359 232 GKTSL------------PSQLN-LDKFSYCLLSHKF--DDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAF 296 (465)
Q Consensus 232 ~~~sl------------~~ql~-~~~Fs~~l~~~~~--~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~ 296 (465)
+.++. .+|.. .++||+||.+... +......|.|+|||+|+++ +.|++.|+|+..
T Consensus 125 ~~~s~~~~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~-~~g~l~~~p~~~---------- 193 (383)
T 2ewy_A 125 ATLAKPSSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSL-YKGDIWYTPIKE---------- 193 (383)
T ss_dssp GGGCSSCTTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGG-CCSCEEEEECSS----------
T ss_pred hhcccccccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhh-ccCccEEEecCC----------
Confidence 87643 34433 3799999964210 1123357999999999998 999999999987
Q ss_pred ceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCCCC
Q 012359 297 SVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGL 376 (465)
Q Consensus 297 ~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ 376 (465)
..+|.|.|++|+|+++.+.++...+ ....+||||||++++||++++++|++++.+.... ..........+.
T Consensus 194 ~~~~~v~l~~i~v~g~~~~~~~~~~-----~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~----~~~~~~~~~~~~ 264 (383)
T 2ewy_A 194 EWYYQIEILKLEIGGQSLNLDCREY-----NADKAIVDSGTTLLRLPQKVFDAVVEAVARASLI----PEFSDGFWTGSQ 264 (383)
T ss_dssp BTTBBCCEEEEEETTEECCCCTTTT-----TSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCS----SCCCHHHHHTSE
T ss_pred CceEEEEEEEEEECCEEcccccccc-----CCccEEEEcCCccccCCHHHHHHHHHHHhhhccc----ccCccccccccc
Confidence 4699999999999999886644322 1367999999999999999999999999886441 000000001346
Q ss_pred CCccccCCCCCccCCeEEEEEcCC-----cEEEecCCCeEEEecC--CCeEEEE-EEecCCCCCCCceeecccceeeeEE
Q 012359 377 RPCFDVPGEKTGSFPELKLHFKGG-----AEVTLPVENYFAVVGE--GSAVCLT-VVTDREASGGPSIILGNFQMQNYYV 448 (465)
Q Consensus 377 ~~C~~~~~~~~~~~p~i~f~f~gg-----~~~~l~~~~yi~~~~~--~~~~C~~-~i~~~~~~~~~~~ILG~~fl~~~y~ 448 (465)
++|+.........+|.|+|+|.|+ .+|+|++++|+.+..+ ++..|+. .+.. ..+.||||+.|||++|+
T Consensus 265 ~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~----~~~~~ILG~~fl~~~yv 340 (383)
T 2ewy_A 265 LACWTNSETPWSYFPKISIYLRDENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISP----STNALVIGATVMEGFYV 340 (383)
T ss_dssp EEEECSSSCGGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCCTTCSEEEEESEEE----ESSCEEECHHHHTTEEE
T ss_pred cccccCCcccHhhCCcEEEEECCCCCCceEEEEEChHHheeecccCCCCceeEEEEecC----CCCcEEEChHHhCCeeE
Confidence 899876443335789999999443 3799999999988642 3568986 3332 12469999999999999
Q ss_pred EEeCCCCEEEEecCCCC
Q 012359 449 EYDLRNQRLGFKQQLCK 465 (465)
Q Consensus 449 vfD~~~~~iGfA~~~C~ 465 (465)
|||++++|||||+++|+
T Consensus 341 vfD~~~~rIGfA~~~c~ 357 (383)
T 2ewy_A 341 IFDRAQKRVGFAASPCA 357 (383)
T ss_dssp EEETTTTEEEEEECTTC
T ss_pred EEECCCCeEEEEeccCC
Confidence 99999999999999994
No 31
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=4.7e-54 Score=432.39 Aligned_cols=322 Identities=23% Similarity=0.351 Sum_probs=250.0
Q ss_pred eecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCCccC
Q 012359 79 TNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHHE 158 (465)
Q Consensus 79 ~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~~~~ 158 (465)
.+|....+..|+++|.||||+|+++|+|||||+++||+|. .|..| ++.|||++|+||+...
T Consensus 13 ~~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~---~c~~~----~~~y~~~~SsT~~~~~------------ 73 (395)
T 2qp8_A 13 DNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA---PHPFL----HRYYQRQLSSTYRDLR------------ 73 (395)
T ss_dssp TCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECS---CCTTC----SCCCCGGGCTTCEEEE------------
T ss_pred eecCCCCCceEEEEEEecCCCceEEEEEecCCCceEEECC---CCccc----cCCcCcccCCCceeCC------------
Confidence 3455555678999999999999999999999999999999 88655 6789999999999875
Q ss_pred CCCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcC-Ccccc-cEEEeceecCC------CCCCcccccC
Q 012359 159 SIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLP-NRIIP-NFLVGCSVLSS------RQPAGIAGFG 230 (465)
Q Consensus 159 ~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~-~~~i~-~~~fg~~~~~~------~~~~GilGLg 230 (465)
| .|.+.|++|++.|.+++|+|+|+ +..++ .+.|++..... ...+||||||
T Consensus 74 ---------------------~-~~~i~Yg~Gs~~G~~~~Dtv~ig~g~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg 131 (395)
T 2qp8_A 74 ---------------------K-GVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLA 131 (395)
T ss_dssp ---------------------E-EEEEECSSCEEEEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECS
T ss_pred ---------------------c-eEEEEECCcEEEEEEEeEEEEECCCCCceEEEEEEEEEccCcccccccCccceEEcC
Confidence 2 89999999999999999999998 55554 35677765321 2349999999
Q ss_pred CCCCCc------------ccccCC-CeeeeecCCCCCCC-----CCCccceEEecCCCCCCcCCCCeeeeccccCCcccc
Q 012359 231 RGKTSL------------PSQLNL-DKFSYCLLSHKFDD-----TTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAE 292 (465)
Q Consensus 231 ~~~~sl------------~~ql~~-~~Fs~~l~~~~~~~-----~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~ 292 (465)
++.++. .+|... ++||+||.+..... .....|.|+|||+|+++ +.|++.|+|+.+
T Consensus 132 ~~~~s~~~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~-~~g~l~~~p~~~------ 204 (395)
T 2qp8_A 132 YAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSL-YTGSLWYTPIRR------ 204 (395)
T ss_dssp CGGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGG-EEEEEEEEECCS------
T ss_pred chhhccCCCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCccc-ccCceEEeccCC------
Confidence 977643 234332 69999997531110 01357999999999998 899999999976
Q ss_pred cCCcceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhccccccccccccc
Q 012359 293 RNAFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEA 372 (465)
Q Consensus 293 ~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 372 (465)
..+|.|.|++|+|+++.+.++...+. ...+||||||++++||++++++|++++.+.... ........
T Consensus 205 ----~~~~~v~l~~i~v~g~~~~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~----~~~~~~~~ 271 (395)
T 2qp8_A 205 ----EWYYEVIIVRVEINGQDLKMDCKEYN-----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST----EKFPDGFW 271 (395)
T ss_dssp ----BTTBBCCEEEEEETTEECCCCGGGGG-----SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTT----SCCCHHHH
T ss_pred ----CceEEEEEEEEEECCEEcccCccccC-----CceEEEEcCCCcEecCHHHHHHHHHHHhhhccc----ccCCcccc
Confidence 46999999999999998876544321 357999999999999999999999999887541 00000000
Q ss_pred CCCCCCccccCCCCCccCCeEEEEEcCCc-----EEEecCCCeEEEecC---CCeEEEE-EEecCCCCCCCceeecccce
Q 012359 373 LTGLRPCFDVPGEKTGSFPELKLHFKGGA-----EVTLPVENYFAVVGE---GSAVCLT-VVTDREASGGPSIILGNFQM 443 (465)
Q Consensus 373 ~~~~~~C~~~~~~~~~~~p~i~f~f~gg~-----~~~l~~~~yi~~~~~---~~~~C~~-~i~~~~~~~~~~~ILG~~fl 443 (465)
..+.++|+.........+|.|+|+|.|+. +|+|+|++|+.+... +...|+. .+.. ..+.||||+.||
T Consensus 272 ~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~----~~~~~ILG~~fl 347 (395)
T 2qp8_A 272 LGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQ----SSTGTVMGAVIM 347 (395)
T ss_dssp TTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEE----ESSCEEECHHHH
T ss_pred ccccccccccccchHhhCCcEEEEEccCCCCceEEEEECHHHhEeecccCCCCCceEEEEEecC----CCCcEEEChHHh
Confidence 12468998765434457999999995442 799999999998653 2358974 4432 124699999999
Q ss_pred eeeEEEEeCCCCEEEEecCCCC
Q 012359 444 QNYYVEYDLRNQRLGFKQQLCK 465 (465)
Q Consensus 444 ~~~y~vfD~~~~~iGfA~~~C~ 465 (465)
|++|+|||++++|||||+++|+
T Consensus 348 ~~~yvvfD~~~~rIGfA~~~c~ 369 (395)
T 2qp8_A 348 EGFYVVFDRARKRIGFAVSACH 369 (395)
T ss_dssp TTEEEEEETTTTEEEEEEETTC
T ss_pred CCeeEEEECCCCEEEEEeccCC
Confidence 9999999999999999999995
No 32
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=3e-53 Score=427.65 Aligned_cols=318 Identities=24% Similarity=0.349 Sum_probs=245.1
Q ss_pred cCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCCccCCCCC
Q 012359 83 SHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHHESIQC 162 (465)
Q Consensus 83 ~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~~~~~~~c 162 (465)
...+..|+++|.||||||+++|+|||||+++||+|. +| |. .++.|||++|+||+...|
T Consensus 24 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~---~c--~~--~~~~y~~~~SsT~~~~~~--------------- 81 (402)
T 3vf3_A 24 GKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA---PH--PF--LHRYYQRQLSSTYRDLRK--------------- 81 (402)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECS---CC--TT--CSCCCCGGGCTTCEEEEE---------------
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccC---CC--Cc--ccCCcCcccCcccccCCC---------------
Confidence 334568999999999999999999999999999999 77 33 378999999999998751
Q ss_pred CCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCC-ccccc-EEEeceecCC------CCCCcccccCCCCC
Q 012359 163 RDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPN-RIIPN-FLVGCSVLSS------RQPAGIAGFGRGKT 234 (465)
Q Consensus 163 ~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~-~~i~~-~~fg~~~~~~------~~~~GilGLg~~~~ 234 (465)
.|.+.|++|++.|.+++|+|+|++ ..++. +.|+++.... ...+||||||++..
T Consensus 82 -------------------~~~i~Yg~Gs~~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~ 142 (402)
T 3vf3_A 82 -------------------GVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEI 142 (402)
T ss_dssp -------------------EEEEECSSCEEEEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGG
T ss_pred -------------------EEEEEECcEEEEEEEEEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhh
Confidence 899999999999999999999984 44443 4477765321 23499999999876
Q ss_pred Ccc------------cccCC-CeeeeecCCCCC--CC---CCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCCc
Q 012359 235 SLP------------SQLNL-DKFSYCLLSHKF--DD---TTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAF 296 (465)
Q Consensus 235 sl~------------~ql~~-~~Fs~~l~~~~~--~~---~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~ 296 (465)
+.+ .|... ++||+||.+... +. .....|.|+|||+|+++ +.|++.|+|+..
T Consensus 143 s~~~~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~-~~g~l~~~p~~~---------- 211 (402)
T 3vf3_A 143 ARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSL-YTGSLWYTPIRR---------- 211 (402)
T ss_dssp CSSCTTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGG-EEEEEEEEECSS----------
T ss_pred cccCCcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCccc-ccCceEEEeCCc----------
Confidence 532 23222 699999975311 10 13457999999999998 999999999987
Q ss_pred ceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCCCC
Q 012359 297 SVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGL 376 (465)
Q Consensus 297 ~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ 376 (465)
..+|.|.+++|+|+++.+.++...+ ....+||||||++++||++++++|++++.+.... ..........+.
T Consensus 212 ~~~w~v~l~~i~v~g~~~~~~~~~~-----~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~----~~~~~~~~~~~~ 282 (402)
T 3vf3_A 212 EWYYEVIIVRVEINGQDLKMDCKEY-----NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST----EKFPDGFWLGEQ 282 (402)
T ss_dssp BTTBEECEEEEEETTEECCCCGGGG-----GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTT----SCCCTTGGGTCS
T ss_pred CcEEEEEEeEEEECCEEeccccccc-----CCCeEEEECCCCcccCCHHHHHHHHHHHhhhccc----cccCcccccccc
Confidence 5799999999999999987654322 1367999999999999999999999999887531 001111112347
Q ss_pred CCccccCCCCCccCCeEEEEEcCCc-----EEEecCCCeEEEecCC---CeEEEE-EEecCCCCCCCceeecccceeeeE
Q 012359 377 RPCFDVPGEKTGSFPELKLHFKGGA-----EVTLPVENYFAVVGEG---SAVCLT-VVTDREASGGPSIILGNFQMQNYY 447 (465)
Q Consensus 377 ~~C~~~~~~~~~~~p~i~f~f~gg~-----~~~l~~~~yi~~~~~~---~~~C~~-~i~~~~~~~~~~~ILG~~fl~~~y 447 (465)
++|+.........+|+|+|+|.|+. +|+|++++|+.+.... ...|++ .+.. ..+.||||++|||++|
T Consensus 283 ~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~----~~~~~ILG~~fl~~~y 358 (402)
T 3vf3_A 283 LVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQ----SSTGTVMGAVIMEGFY 358 (402)
T ss_dssp CEEEETTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEE----ESSCEEECHHHHTTEE
T ss_pred ccccccccchHhhCCceEEEEecCCCCceEEEEECHHHheehhccCCCCCceEEEEeccC----CCCcEEEChHHhCCeE
Confidence 8999875444457999999994332 5999999999986542 258996 3322 2356999999999999
Q ss_pred EEEeCCCCEEEEecCCCC
Q 012359 448 VEYDLRNQRLGFKQQLCK 465 (465)
Q Consensus 448 ~vfD~~~~~iGfA~~~C~ 465 (465)
+|||++++|||||+++|+
T Consensus 359 vvfD~~~~rIGfA~~~c~ 376 (402)
T 3vf3_A 359 VVFDRARKRIGFAVSACH 376 (402)
T ss_dssp EEEEGGGTEEEEEEETTC
T ss_pred EEEECCCCEEEEEecccC
Confidence 999999999999999996
No 33
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=2.1e-51 Score=410.84 Aligned_cols=334 Identities=24% Similarity=0.479 Sum_probs=243.7
Q ss_pred eeecc-cCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCCc
Q 012359 78 TTNIS-SHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIH 156 (465)
Q Consensus 78 ~~~l~-~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~~ 156 (465)
..|+. +..+..|+++|.|||| |+|||||+++||+|. .|. +|+.+.|.+..|....
T Consensus 4 ~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~---~~~----------------~~~~~~C~s~~C~~~~ 59 (381)
T 1t6e_X 4 LAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCD---GGQ----------------PPAEIPCSSPTCLLAN 59 (381)
T ss_dssp EEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCC---TTC----------------CCCCCBTTSHHHHHHH
T ss_pred EEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCC---CCC----------------CCCccCCCCchhcccc
Confidence 45665 6667899999999997 999999999999997 541 2445667666665432
Q ss_pred cCCC-CCCCCCCCCccCCCCC-ccCCCceeEecCCce-EEEeEEEEEEEcCC----cccccE----EEeceecC--C---
Q 012359 157 HESI-QCRDCNDEPLATSKNC-TQICPSYLVLYGSGL-TEGIALSETLNLPN----RIIPNF----LVGCSVLS--S--- 220 (465)
Q Consensus 157 ~~~~-~c~~c~~~~~~~~~~c-~~~C~~~~~~Yg~g~-~~G~~~~D~v~~~~----~~i~~~----~fg~~~~~--~--- 220 (465)
.... .|..-.. ...| .+.|..|.+.||+|+ +.|.+++|+|++++ ..++++ .|||+... .
T Consensus 60 ~~~~~sc~~~~~-----~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~~ 134 (381)
T 1t6e_X 60 AYPAPGCPAPSC-----GSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLP 134 (381)
T ss_dssp SSCCTTCCCCCC-----------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSC
T ss_pred CCCCCCCCCccC-----CcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCCC
Confidence 2111 2211000 0001 134524999999998 59999999999984 466665 56999754 1
Q ss_pred CCCCcccccCCCCCCcccccC-----CCeeeeecCCCCCCCCCCccceEEecCCCCC--CcCCCCeeeeccccCCccccc
Q 012359 221 RQPAGIAGFGRGKTSLPSQLN-----LDKFSYCLLSHKFDDTTRTSSLILDNGSSHS--DKKTTGLTYTPFVNNPSVAER 293 (465)
Q Consensus 221 ~~~~GilGLg~~~~sl~~ql~-----~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~--~~~~g~l~~~p~~~~~~~~~~ 293 (465)
...+||||||++.++++.|+. .++||+||.+. .+|.|+|||+|.. + +.+++.|+|++..+.
T Consensus 135 ~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~-------~~G~l~fGg~~~~~~~-~~g~l~~tPl~~~~~---- 202 (381)
T 1t6e_X 135 RGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTG-------GPGVAIFGGGPVPWPQ-FTQSMPYTPLVTKGG---- 202 (381)
T ss_dssp TTEEEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSS-------SCEEEEESCCSCSCHH-HHTTCCEEECBCCTT----
T ss_pred CCCceEEEeCCCcchhHHHHhhhcccCceEEEEeCCC-------CCeeEEeCCccccccc-ccCcceeeccccCCC----
Confidence 234999999999999998875 48999999763 5799999998764 3 689999999987543
Q ss_pred CCcceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcc----cccccccc
Q 012359 294 NAFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKN----RNYTRALG 369 (465)
Q Consensus 294 ~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~----~~~~~~~~ 369 (465)
..+|.|+|++|+|+++.+.++...+. ...+||||||++++||+++|++|.+++.+.+... +.+.+..
T Consensus 203 ---~~~y~v~l~~i~vg~~~~~~~~~~~~-----~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~- 273 (381)
T 1t6e_X 203 ---SPAHYISARSIVVGDTRVPVPEGALA-----TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAV- 273 (381)
T ss_dssp ---CCSCEECEEEEEETTEECCCCTTCSC-----TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEE-
T ss_pred ---CcceEEEEEEEEEcCEEecCCHHHcc-----CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccC-
Confidence 23566999999999998876544332 3579999999999999999999999998876410 0111110
Q ss_pred cccCCCCCCccccCCCC----CccCCeEEEEEcCCcEEEecCCCeEEEecCCCeEEEEEEecCCC----CCCCceeeccc
Q 012359 370 AEALTGLRPCFDVPGEK----TGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREA----SGGPSIILGNF 441 (465)
Q Consensus 370 ~~~~~~~~~C~~~~~~~----~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~~~~~C~~~i~~~~~----~~~~~~ILG~~ 441 (465)
....++.+|+..++.. ...+|+|+|+|.||++|+|++++|+++... +..|+++...... ..++.||||+.
T Consensus 274 -~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~-~~~Cl~~~~~~~~~~~~~~~~~~ILGd~ 351 (381)
T 1t6e_X 274 -EAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQ-GTACVAFVEMKGVAAGDGRAPAVILGGA 351 (381)
T ss_dssp -CCCTTCSCEEEGGGCCEETTEECCCCEEEEETTSCEEEECHHHHEEEEET-TEEEESEEECCCCC------CSEEECHH
T ss_pred -CCCCCCCccCCCCCCcccccCCcCCeEEEEECCCcEEEeCCCeEEEEcCC-CeEEEEEEcCCCcccccCCCceEEEChH
Confidence 1224568999764321 136899999995569999999999998654 6789965543210 12357999999
Q ss_pred ceeeeEEEEeCCCCEEEEecCC
Q 012359 442 QMQNYYVEYDLRNQRLGFKQQL 463 (465)
Q Consensus 442 fl~~~y~vfD~~~~~iGfA~~~ 463 (465)
|||++|+|||++++|||||++.
T Consensus 352 fl~~~yvvfD~~~~riGfA~~~ 373 (381)
T 1t6e_X 352 QMEDFVLDFDMEKKRLGFSRLP 373 (381)
T ss_dssp HHTTEEEEEETTTTEEEEEECC
T ss_pred HhCCcEEEEECCCCEEEEeccc
Confidence 9999999999999999999864
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1e-42 Score=325.29 Aligned_cols=217 Identities=19% Similarity=0.328 Sum_probs=186.3
Q ss_pred eeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCC---CCCCCCCCCCCCCCCCCcccccCCCccCCC
Q 012359 78 TTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCK---YCSSSKIPSFIPKLSSSSRLLGCQNPKCSW 154 (465)
Q Consensus 78 ~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~---~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~ 154 (465)
..+|.+..+..|+++|.||||+|++.|+|||||+++||+|. .|. .|.. ++.|||++|+||+...
T Consensus 4 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~---~C~~~~~C~~--~~~y~~~~SsT~~~~~-------- 70 (239)
T 1b5f_A 4 VVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSS---KCINSKACRA--HSMYESSDSSTYKENG-------- 70 (239)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT---TCCSCHHHHT--SCCBCGGGCTTCEEEE--------
T ss_pred eeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcC---CCCCCcccCC--CCCCCCccCCCeeeCC--------
Confidence 46788888899999999999999999999999999999999 896 4654 6899999999998765
Q ss_pred CccCCCCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCCcccccEEEeceecCC------CCCCcccc
Q 012359 155 IHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSS------RQPAGIAG 228 (465)
Q Consensus 155 ~~~~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~~~i~~~~fg~~~~~~------~~~~GilG 228 (465)
| .|.+.|++|++.|.+++|+|++++..++++.|||+.... ...+||||
T Consensus 71 -------------------------~-~~~i~Yg~Gs~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~f~~~~~~GilG 124 (239)
T 1b5f_A 71 -------------------------T-FGAIIYGTGSITGFFSQDSVTIGDLVVKEQDFIEATDEADNVFLHRLFDGILG 124 (239)
T ss_dssp -------------------------E-EEEEECSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTTCSCCEEEE
T ss_pred -------------------------c-EEEEEECCCcEEEEEEEEEEEECCcEEccEEEEEEEeccCccccccCcceEEe
Confidence 1 899999999999999999999999999999999987532 23499999
Q ss_pred cCCCCCCc------ccc--cCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCCcceeE
Q 012359 229 FGRGKTSL------PSQ--LNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSVYY 300 (465)
Q Consensus 229 Lg~~~~sl------~~q--l~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~~~w 300 (465)
||++..+. .+| +..++||+||.+. ......|.|+|||+|+++ +.|++.|+|+.. ..+|
T Consensus 125 Lg~~~~s~p~~~~l~~qg~i~~~~FS~~l~~~---~~~~~~G~l~fGg~d~~~-~~g~l~~~p~~~----------~~~~ 190 (239)
T 1b5f_A 125 LSFQTISVPVWYNMLNQGLVKERRFSFWLNRN---VDEEEGGELVFGGLDPNH-FRGDHTYVPVTY----------QYYW 190 (239)
T ss_dssp CSCCSSSCCHHHHHHHTTCCSSSEEEEEECCS---CSSSCCEEEEETSCCGGG-EEEEEEEEEEEE----------ETTE
T ss_pred cCccccccHHHHHHHHCCCCCCCEEEEEEeCC---CCCCCCeEEEECCcChhh-ccCceEEEEccc----------CCeE
Confidence 99998873 334 4458999999874 123357999999999998 899999999986 5799
Q ss_pred EEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHH
Q 012359 301 YVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFV 355 (465)
Q Consensus 301 ~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~ 355 (465)
.|.|++|+|+++.+.+. .....+||||||++++||++++++|.++++
T Consensus 191 ~v~l~~i~v~~~~~~~~--------~~~~~aiiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 191 QFGIGDVLIGDKSTGFC--------APGCQAFADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp EEEECCEEETTEECCTT--------TTCEEEEECTTCSSEEECHHHHHHHHHHTT
T ss_pred EEEeeEEEECCEEeccc--------CCCCEEEEecCcchhhCCHHHHHHHHHHhC
Confidence 99999999999886532 223679999999999999999999998774
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=2.1e-38 Score=297.02 Aligned_cols=220 Identities=22% Similarity=0.372 Sum_probs=177.1
Q ss_pred CCcccccEEEeceecCCC------CCCcccccCCCCCCcc----------cc--cCCCeeeeecCCCCCCCCCCccceEE
Q 012359 204 PNRIIPNFLVGCSVLSSR------QPAGIAGFGRGKTSLP----------SQ--LNLDKFSYCLLSHKFDDTTRTSSLIL 265 (465)
Q Consensus 204 ~~~~i~~~~fg~~~~~~~------~~~GilGLg~~~~sl~----------~q--l~~~~Fs~~l~~~~~~~~~~~~g~l~ 265 (465)
|+.+++++.|||++.... ..+||||||++..+.. +| +..++||+||.+.. .....|.|+
T Consensus 1 gg~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~---~~~~~G~l~ 77 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDP---DAQPGGELM 77 (241)
T ss_dssp CCEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSST---TCSSCEEEE
T ss_pred CCeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCC---CCCCCcEEE
Confidence 466789999999986532 3499999999876532 23 44589999998741 122479999
Q ss_pred ecCCCCCCcCCCCeeeeccccCCcccccCCcceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChh
Q 012359 266 DNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPE 345 (465)
Q Consensus 266 ~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~ 345 (465)
|||+|+++ +.|++.|+|+.+ ..+|.|.+++|+|+++.+.. .....++|||||+++++|++
T Consensus 78 fGg~d~~~-~~g~l~~~p~~~----------~~~~~v~l~~i~v~~~~~~~---------~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 78 LGGTDSKY-YKGSLSYLNVTR----------KAYWQVHLDQVEVASGLTLC---------KEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp ETSCCGGG-EEEEEEEEECSS----------BTTBEEEEEEEEETTSCEES---------TTCEEEEECTTCSSEEECHH
T ss_pred ECCcCHHH-cCCceEEEECcc----------ccEEEEEEeEEEECCeeEec---------cCCCEEEEECCCccccCCHH
Confidence 99999998 999999999986 57999999999999976421 23467999999999999999
Q ss_pred hhHHHHHHHHHHhhcccccccccccccCCCCCCccccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecC-CCeEEEEE
Q 012359 346 LFEPLADEFVSQMVKNRNYTRALGAEALTGLRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGE-GSAVCLTV 424 (465)
Q Consensus 346 ~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~-~~~~C~~~ 424 (465)
++++|.+++.+... ..+.|.++|+.. ..+|+|+|+| +|++|+|++++|+++... ++..|+..
T Consensus 138 ~~~~l~~~~~~~~~-----------~~g~~~~~C~~~-----~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~ 200 (241)
T 1lya_B 138 EVRELQKAIGAVPL-----------IQGEYMIPCEKV-----STLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSG 200 (241)
T ss_dssp HHHHHHHHHTCEEE-----------ETTEEEEEGGGG-----GGSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEES
T ss_pred HHHHHHHHhCCeec-----------cCCcEEEECCCC-----ccCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEE
Confidence 99999988754321 234577899876 6899999999 899999999999998754 24689986
Q ss_pred EecCCC--CCCCceeecccceeeeEEEEeCCCCEEEEecCC
Q 012359 425 VTDREA--SGGPSIILGNFQMQNYYVEYDLRNQRLGFKQQL 463 (465)
Q Consensus 425 i~~~~~--~~~~~~ILG~~fl~~~y~vfD~~~~~iGfA~~~ 463 (465)
+...+. ..++.||||++|||++|+|||++++|||||+++
T Consensus 201 ~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 201 FMGMDIPPPSGPLWILGDVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp EEECCCCTTTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEecccCCCCCCeEEechHHhcceEEEEECCCCEEEEEEcC
Confidence 654321 134679999999999999999999999999874
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.88 E-value=3.5e-23 Score=163.61 Aligned_cols=89 Identities=29% Similarity=0.497 Sum_probs=81.0
Q ss_pred eeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCC----CCCCCCCCCCCCCCCCCcccccCCCccCC
Q 012359 78 TTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCK----YCSSSKIPSFIPKLSSSSRLLGCQNPKCS 153 (465)
Q Consensus 78 ~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~----~C~~~~~~~y~p~~SsT~~~~~c~~~~c~ 153 (465)
..||.+..+..|+++|.||||||+|.|+|||||+++||+|. .|. .|.. ++.|||++|+||+...
T Consensus 4 ~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~---~C~~~~~~C~~--~~~y~p~~SsT~~~~~------- 71 (97)
T 1lya_A 4 PEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSI---HCKLLDIACWI--HHKYNSDKSSTYVKNG------- 71 (97)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT---TCCTTCHHHHT--SCCBCGGGCTTCEEEE-------
T ss_pred eEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEc---CccCcccccCC--CCCCCchhCCCceeCC-------
Confidence 46788888899999999999999999999999999999999 897 4754 7899999999999865
Q ss_pred CCccCCCCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCC
Q 012359 154 WIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPN 205 (465)
Q Consensus 154 ~~~~~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~ 205 (465)
| .|.+.||+|++.|.+++|+|+|++
T Consensus 72 --------------------------~-~~~i~Yg~Gs~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 --------------------------T-SFDIHYGSGSLSGYLSQDTVSVPC 96 (97)
T ss_dssp --------------------------E-EEEEECSSCEEEEEEEEEEEEESC
T ss_pred --------------------------C-cEEEEECCcEEEEEEEEEEEEECC
Confidence 2 899999999999999999999976
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.76 E-value=8.2e-19 Score=136.24 Aligned_cols=84 Identities=29% Similarity=0.492 Sum_probs=70.6
Q ss_pred CCCCCccccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecC-CCeEEEEEEecCCC-CCCCceeecccceeeeEEEEe
Q 012359 374 TGLRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGE-GSAVCLTVVTDREA-SGGPSIILGNFQMQNYYVEYD 451 (465)
Q Consensus 374 ~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~-~~~~C~~~i~~~~~-~~~~~~ILG~~fl~~~y~vfD 451 (465)
.|.++|... ..+|+|+|+| ||++++|+|++|+++... +...|++.+...+. ..++.||||+.|||++|+|||
T Consensus 2 ~y~v~C~~~-----~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD 75 (87)
T 1b5f_B 2 ELQVDCNTL-----SSMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFD 75 (87)
T ss_dssp CCEECGGGG-----GGCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEE
T ss_pred cEEEECCCC-----CcCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEE
Confidence 577899876 6899999999 899999999999998654 24689987765321 234589999999999999999
Q ss_pred CCCCEEEEecCC
Q 012359 452 LRNQRLGFKQQL 463 (465)
Q Consensus 452 ~~~~~iGfA~~~ 463 (465)
++++|||||+++
T Consensus 76 ~~~~riGfA~~~ 87 (87)
T 1b5f_B 76 YGNLLVGFAEAA 87 (87)
T ss_dssp TTTTEEEEEEEC
T ss_pred CCCCEEEEEEcC
Confidence 999999999874
No 38
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=94.56 E-value=0.054 Score=45.32 Aligned_cols=27 Identities=19% Similarity=0.244 Sum_probs=24.6
Q ss_pred ceeecccceeeeEEEEeCCCCEEEEec
Q 012359 435 SIILGNFQMQNYYVEYDLRNQRLGFKQ 461 (465)
Q Consensus 435 ~~ILG~~fl~~~y~vfD~~~~~iGfA~ 461 (465)
..|||..||+.+-.+.|+.++++-|..
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~~ 134 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIGT 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECTT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEcc
Confidence 479999999999999999999998864
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=93.25 E-value=0.16 Score=42.34 Aligned_cols=26 Identities=15% Similarity=0.262 Sum_probs=23.8
Q ss_pred ceeecccceeeeEEEEeCCCCEEEEe
Q 012359 435 SIILGNFQMQNYYVEYDLRNQRLGFK 460 (465)
Q Consensus 435 ~~ILG~~fl~~~y~vfD~~~~~iGfA 460 (465)
..|||..||+++-+.+|+.+++|-|.
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEc
Confidence 37999999999999999999999875
No 40
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=92.99 E-value=0.06 Score=44.95 Aligned_cols=33 Identities=12% Similarity=0.149 Sum_probs=27.5
Q ss_pred CCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCC
Q 012359 84 HSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCT 118 (465)
Q Consensus 84 ~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~ 118 (465)
...+.+++++.|+. +++++++|||++.+.+...
T Consensus 22 ~~~~~~~v~v~InG--~~~~~LvDTGAs~s~is~~ 54 (148)
T 2i1a_A 22 TQVPMLYINIEINN--YPVKAFVDTGAQTTIMSTR 54 (148)
T ss_dssp -CCCCCEEEEEETT--EEEEEEECTTCSSCEEEHH
T ss_pred cccceEEEEEEECC--EEEEEEEECCCCccccCHH
Confidence 34578999999985 8999999999999988654
No 41
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=88.33 E-value=0.59 Score=38.86 Aligned_cols=30 Identities=10% Similarity=0.158 Sum_probs=26.7
Q ss_pred ccEEEEEeeCCCCcEEEEEEEcCCCceeEeCC
Q 012359 87 GGYSISLSFGTPPQIIPFILDTGSHLVWFPCT 118 (465)
Q Consensus 87 ~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~ 118 (465)
..|++++.|.. +++++++|||++.+.+...
T Consensus 23 ~~l~v~~~Ing--~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 23 TMLYINCKVNG--HPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCEEEEEETT--EEEEEEECTTCSSCEEEHH
T ss_pred CEEEEEEEECC--EEEEEEEeCCCCcEeeCHH
Confidence 57899999985 9999999999999998765
No 42
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=76.99 E-value=2.4 Score=32.79 Aligned_cols=27 Identities=15% Similarity=0.191 Sum_probs=23.7
Q ss_pred EEEEEeeCCCCcEEEEEEEcCCCceeEeC
Q 012359 89 YSISLSFGTPPQIIPFILDTGSHLVWFPC 117 (465)
Q Consensus 89 y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~ 117 (465)
-++.|.||. |.+.+++|||.+++-+..
T Consensus 9 P~v~v~I~G--q~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 9 PTTIVLIND--TPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEEH
T ss_pred CEEEEEECC--EEEEEEeccCCCcEEEcc
Confidence 467899995 999999999999999983
No 43
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=75.30 E-value=2.9 Score=31.98 Aligned_cols=27 Identities=22% Similarity=0.319 Sum_probs=23.8
Q ss_pred EEEEeeCCCCcEEEEEEEcCCCceeEeCC
Q 012359 90 SISLSFGTPPQIIPFILDTGSHLVWFPCT 118 (465)
Q Consensus 90 ~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~ 118 (465)
++.|.||- |.+.+++|||.+++-+...
T Consensus 10 ~vtvkI~G--q~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 10 LVTIKIGG--QLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSEEESCC
T ss_pred EEEEEECC--EEEEEEeccCCCcEEEecc
Confidence 56799995 9999999999999999765
No 44
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=72.36 E-value=3.2 Score=32.36 Aligned_cols=29 Identities=28% Similarity=0.493 Sum_probs=24.8
Q ss_pred EEEEeeC---CCCcEEEEEEEcCCCceeEeCC
Q 012359 90 SISLSFG---TPPQIIPFILDTGSHLVWFPCT 118 (465)
Q Consensus 90 ~~~i~iG---tP~q~~~v~iDTGS~~~Wv~~~ 118 (465)
.+.|.|| +|+|.+..++|||-+++-+...
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~ 43 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIA 43 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGG
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecc
Confidence 4566666 7899999999999999999876
No 45
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=67.41 E-value=5.2 Score=30.29 Aligned_cols=17 Identities=12% Similarity=0.227 Sum_probs=14.7
Q ss_pred CceEEccccceeecChh
Q 012359 329 GGTIVDSGTTFTFMAPE 345 (465)
Q Consensus 329 ~~~iiDSGt~~~~lp~~ 345 (465)
..++||||++.+++|..
T Consensus 28 ~~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 28 FTVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEEETTCCCEEEEBT
T ss_pred EEEEEeCCCCceEEeEc
Confidence 34899999999999975
No 46
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=66.27 E-value=5.6 Score=30.29 Aligned_cols=27 Identities=19% Similarity=0.193 Sum_probs=23.7
Q ss_pred EEEEeeCCCCcEEEEEEEcCCCceeEeCC
Q 012359 90 SISLSFGTPPQIIPFILDTGSHLVWFPCT 118 (465)
Q Consensus 90 ~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~ 118 (465)
++.|.||- |.+.+++|||.+++-+...
T Consensus 10 ~vti~I~G--q~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIEG--QPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEESSC
T ss_pred eEEEEECC--EEEEEEEecCCCceEEcCc
Confidence 66799995 9999999999999999655
No 47
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=61.77 E-value=7.1 Score=30.69 Aligned_cols=26 Identities=23% Similarity=0.354 Sum_probs=22.5
Q ss_pred EEEEeeCCCCcEEEEEEEcCCCceeEeCC
Q 012359 90 SISLSFGTPPQIIPFILDTGSHLVWFPCT 118 (465)
Q Consensus 90 ~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~ 118 (465)
++ |.||- |.+.+++|||.+++-+...
T Consensus 16 ~v-ikI~G--q~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 16 IL-IFVNG--YPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EE-EEETT--EEEEEEECTTCSSCEEEGG
T ss_pred EE-EEECC--EEEEEEecCCCCcEEEccc
Confidence 44 89985 9999999999999998754
No 48
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=54.42 E-value=13 Score=29.10 Aligned_cols=27 Identities=15% Similarity=0.327 Sum_probs=23.8
Q ss_pred EEEEeeCCCCcEEEEEEEcCCCceeEeCC
Q 012359 90 SISLSFGTPPQIIPFILDTGSHLVWFPCT 118 (465)
Q Consensus 90 ~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~ 118 (465)
.+.|.||- |.+..++|||-+++-+...
T Consensus 11 ~vti~I~G--q~~eaLLDTGADdTVi~~~ 37 (114)
T 3sqf_A 11 SLTLWLDD--KMFTGLINTGADVTIIKLE 37 (114)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEEEGG
T ss_pred eEEEEECC--EEEEEEEccCCCceEEecc
Confidence 56789985 9999999999999999865
No 49
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=49.97 E-value=16 Score=34.16 Aligned_cols=33 Identities=18% Similarity=0.333 Sum_probs=24.3
Q ss_pred ceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhh
Q 012359 297 SVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELF 347 (465)
Q Consensus 297 ~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~ 347 (465)
...|.++ |.||.+.+ .++||||++.+++|..-.
T Consensus 14 ~~~Y~~~---i~iG~Q~~---------------~v~~DTGSs~lWv~~~~C 46 (323)
T 1bxo_A 14 DEEYITP---VTIGGTTL---------------NLNFDTGSADLWVFSTEL 46 (323)
T ss_dssp GSCEEEE---EEETTEEE---------------EEEEETTCCCEEECBTTS
T ss_pred CCEEEEE---EEECCEEE---------------EEEEeCCCcceEEecCCC
Confidence 4567654 67885543 489999999999997643
No 50
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=45.93 E-value=20 Score=33.59 Aligned_cols=33 Identities=21% Similarity=0.311 Sum_probs=24.2
Q ss_pred ceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhh
Q 012359 297 SVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELF 347 (465)
Q Consensus 297 ~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~ 347 (465)
...|.++ |.||.+.+ .++||||++.+++|..-.
T Consensus 14 ~~~Y~~~---i~iG~q~~---------------~v~~DTGSs~lWv~~~~C 46 (323)
T 1izd_A 14 DEEYITQ---VTVGDDTL---------------GLDFDTGSADLWVFSSQT 46 (323)
T ss_dssp GCCEEEE---EEETTEEE---------------EEEEETTCCCEEECBTTS
T ss_pred CCEEEEE---EEECCEEE---------------EEEEcCCCcceEEecCCC
Confidence 4567654 67885443 489999999999997643
No 51
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=45.81 E-value=21 Score=33.95 Aligned_cols=44 Identities=16% Similarity=0.248 Sum_probs=30.0
Q ss_pred CCCeeeeccccCCcccccCCcceeEEEEeeEEEEC--CEEEEeeccceecccCCCCceEEccccceeecChh
Q 012359 276 TTGLTYTPFVNNPSVAERNAFSVYYYVGLRRITVG--GQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPE 345 (465)
Q Consensus 276 ~g~l~~~p~~~~~~~~~~~~~~~~w~v~l~~i~v~--~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~ 345 (465)
.|.+...|+.+.. ...|.++ |.|| .+. ..++||||++.+++|..
T Consensus 4 ~g~~~~~~l~~~~--------~~~Y~~~---i~iGtP~q~---------------~~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFD--------LEEYAIP---VSIGTPGQD---------------FYLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETT--------TTEEEEE---EEETTTTEE---------------EEEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCC--------CCEEEEE---EEECCCCcE---------------EEEEEcCCCCCeEECCC
Confidence 4556667776632 3466654 6777 444 34899999999999975
No 52
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=43.56 E-value=21 Score=28.74 Aligned_cols=29 Identities=28% Similarity=0.424 Sum_probs=25.0
Q ss_pred cEEEEEeeCCCCcEEEEEEEcCCCceeEeCC
Q 012359 88 GYSISLSFGTPPQIIPFILDTGSHLVWFPCT 118 (465)
Q Consensus 88 ~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~ 118 (465)
.-++.+.|+- |.+.+++|||.+++-+...
T Consensus 22 RP~v~i~I~G--~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 22 EPRITLKVGG--QPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SSEEEEEETT--EEEEEEECTTCSSCEECSC
T ss_pred CCEEEEEECC--EEEEEEEeCCCCeEEEccc
Confidence 4577899985 9999999999999999765
No 53
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=43.41 E-value=18 Score=33.77 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=24.1
Q ss_pred ceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhh
Q 012359 297 SVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELF 347 (465)
Q Consensus 297 ~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~ 347 (465)
...|.++ |.||.+.+ .++||||++.+++|....
T Consensus 13 ~~~Y~~~---i~iG~Q~~---------------~v~~DTGSs~lWv~~~~C 45 (325)
T 1ibq_A 13 DEEYLTP---VTVGKSTL---------------HLDFDTGSADLWVFSDEL 45 (325)
T ss_dssp TSCEEEE---EEEBTEEE---------------EEEEETTCCCEEEECTTS
T ss_pred CCEEEEE---EEECCEEE---------------EEEEeCCCccceEeeCCC
Confidence 4567655 66775543 489999999999997543
No 54
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=42.50 E-value=23 Score=33.03 Aligned_cols=18 Identities=11% Similarity=0.167 Sum_probs=15.2
Q ss_pred CceEEccccceeecChhh
Q 012359 329 GGTIVDSGTTFTFMAPEL 346 (465)
Q Consensus 329 ~~~iiDSGt~~~~lp~~~ 346 (465)
..++||||++.+++|...
T Consensus 29 ~~v~~DTGSs~~Wv~~~~ 46 (323)
T 3cms_A 29 FTVLFDTGSSDFWVPSIY 46 (323)
T ss_dssp EEEEEETTCCCEEEEBTT
T ss_pred EEEEEeCCccceEEcCCC
Confidence 348999999999999753
No 55
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=37.29 E-value=25 Score=27.86 Aligned_cols=22 Identities=18% Similarity=0.256 Sum_probs=18.8
Q ss_pred eCCCCcEEEEEEEcCCCceeEeCC
Q 012359 95 FGTPPQIIPFILDTGSHLVWFPCT 118 (465)
Q Consensus 95 iGtP~q~~~v~iDTGS~~~Wv~~~ 118 (465)
|| .|.+.+++|||-+++-+...
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~ 48 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEE 48 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETT
T ss_pred CC--CEEEEEEecCCCCcEEEecc
Confidence 55 38889999999999999866
No 56
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=37.19 E-value=28 Score=30.24 Aligned_cols=29 Identities=21% Similarity=0.229 Sum_probs=24.8
Q ss_pred cEEEEEeeCCCCcEEEEEEEcCCCceeEeCC
Q 012359 88 GYSISLSFGTPPQIIPFILDTGSHLVWFPCT 118 (465)
Q Consensus 88 ~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~ 118 (465)
.-.+.|.||- |.+.+++|||.+++-+...
T Consensus 8 RP~vtv~I~G--q~~e~LLDTGAD~TVl~~~ 36 (203)
T 3ka2_A 8 RPLVTIRIGG--QLKEALLDTGADDTVIEEL 36 (203)
T ss_dssp CCEEEEEETT--EEEEEEECTTCSSCEECSC
T ss_pred CCeEEEEECC--EEEEEEEecCCCceEEecc
Confidence 3467899995 9999999999999998754
No 57
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=36.42 E-value=28 Score=30.93 Aligned_cols=18 Identities=17% Similarity=0.305 Sum_probs=15.0
Q ss_pred CceEEccccceeecChhh
Q 012359 329 GGTIVDSGTTFTFMAPEL 346 (465)
Q Consensus 329 ~~~iiDSGt~~~~lp~~~ 346 (465)
..++||||++.+++|...
T Consensus 28 ~~v~~DTGSs~lWv~~~~ 45 (239)
T 1b5f_A 28 FTVIFDTGSSVLWVPSSK 45 (239)
T ss_dssp EEEEEETTCCCEEEEBTT
T ss_pred EEEEEeCCCcceEEEcCC
Confidence 348999999999998653
No 58
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=34.48 E-value=22 Score=27.00 Aligned_cols=31 Identities=26% Similarity=0.425 Sum_probs=24.3
Q ss_pred eEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecCh
Q 012359 299 YYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAP 344 (465)
Q Consensus 299 ~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~ 344 (465)
.|.=++-.++|+|+.+. +++|||+-.+.+.+
T Consensus 5 l~~rP~vtvkI~Gq~~e---------------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 5 LWKRPLVTIKIGGQLKE---------------ALLDTGADDTIIEE 35 (99)
T ss_dssp SSSCCEEEEEETTEEEE---------------EEECTTCSSEEESC
T ss_pred ccCCCEEEEEECCEEEE---------------EEeccCCCcEEEec
Confidence 34445667899998753 89999999998875
No 59
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=32.69 E-value=41 Score=31.40 Aligned_cols=16 Identities=13% Similarity=0.187 Sum_probs=14.4
Q ss_pred ceEEccccceeecChh
Q 012359 330 GTIVDSGTTFTFMAPE 345 (465)
Q Consensus 330 ~~iiDSGt~~~~lp~~ 345 (465)
.++||||++.+++|..
T Consensus 31 ~v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 31 NLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEETTCCCEEECBT
T ss_pred EEEECCCCCCeEEecC
Confidence 4899999999999975
No 60
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=31.96 E-value=23 Score=27.11 Aligned_cols=32 Identities=6% Similarity=0.142 Sum_probs=24.7
Q ss_pred EEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhh
Q 012359 300 YYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPEL 346 (465)
Q Consensus 300 w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~ 346 (465)
|.=++-.++|+|+.+ .+++|||+-.+.+....
T Consensus 6 ~~RP~v~v~I~Gq~~---------------e~LLDTGAD~TVl~~~~ 37 (104)
T 1fmb_A 6 EKRPTTIVLINDTPL---------------NVLLDTGADTSVLTTAH 37 (104)
T ss_dssp SSCCEEEEEETTEEE---------------EEEECTTCSSCEEEHHH
T ss_pred cCCCEEEEEECCEEE---------------EEEeccCCCcEEEcccc
Confidence 444455688999864 38999999999998754
No 61
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=31.86 E-value=25 Score=26.68 Aligned_cols=31 Identities=19% Similarity=0.305 Sum_probs=24.4
Q ss_pred eEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecCh
Q 012359 299 YYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAP 344 (465)
Q Consensus 299 ~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~ 344 (465)
.|.=++-.++|+|+.+. +++|||+-.+.+..
T Consensus 5 l~~RP~vti~I~Gq~~e---------------~LLDTGAD~TVl~~ 35 (99)
T 3ec0_A 5 LWKRPVVTAYIEGQPVE---------------VLLDTGADDSIVAG 35 (99)
T ss_dssp SSSCCEEEEEETTEEEE---------------EEECTTCSSCEESS
T ss_pred cccCCeEEEEECCEEEE---------------EEEecCCCceEEcC
Confidence 45556677999998764 89999999988853
No 62
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=31.61 E-value=44 Score=31.20 Aligned_cols=18 Identities=11% Similarity=0.038 Sum_probs=15.4
Q ss_pred ceEEccccceeecChhhh
Q 012359 330 GTIVDSGTTFTFMAPELF 347 (465)
Q Consensus 330 ~~iiDSGt~~~~lp~~~~ 347 (465)
.++||||++.+++|....
T Consensus 31 ~v~~DTGSs~lWv~~~~C 48 (329)
T 3c9x_A 31 PLDFDTGSSDLWVFSSET 48 (329)
T ss_dssp EEEEETTCCCEEECBTTS
T ss_pred EEEEcCCCCCeEEecCCC
Confidence 489999999999997643
No 63
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=31.13 E-value=42 Score=31.45 Aligned_cols=16 Identities=25% Similarity=0.495 Sum_probs=14.0
Q ss_pred CceEEccccceeecCh
Q 012359 329 GGTIVDSGTTFTFMAP 344 (465)
Q Consensus 329 ~~~iiDSGt~~~~lp~ 344 (465)
..++||||++.+++|.
T Consensus 27 ~~v~~DTGSs~lWv~~ 42 (340)
T 1wkr_A 27 YSLLVDTGSSNTWLGA 42 (340)
T ss_dssp EEEEEETTCCCCEECS
T ss_pred EEEEEeCCChhheecC
Confidence 3499999999999986
No 64
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=30.21 E-value=41 Score=31.48 Aligned_cols=17 Identities=12% Similarity=0.366 Sum_probs=14.3
Q ss_pred CceEEccccceeecChh
Q 012359 329 GGTIVDSGTTFTFMAPE 345 (465)
Q Consensus 329 ~~~iiDSGt~~~~lp~~ 345 (465)
..++||||++.+++|..
T Consensus 27 ~~v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 27 QTVVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEEEETTCCCEEEEEE
T ss_pred EEEEEcCCCCCEEEecC
Confidence 34999999999999853
No 65
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=29.76 E-value=29 Score=27.13 Aligned_cols=30 Identities=20% Similarity=0.310 Sum_probs=24.7
Q ss_pred eEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecCh
Q 012359 299 YYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAP 344 (465)
Q Consensus 299 ~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~ 344 (465)
.|.=++- |+|+|+.+. +++|||+-.+.+..
T Consensus 11 l~~rP~v-ikI~Gq~~e---------------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 11 EKRPEIL-IFVNGYPIK---------------FLLDTGADITVLNR 40 (116)
T ss_dssp SSCCEEE-EEETTEEEE---------------EEECTTCSSCEEEG
T ss_pred ccCCCEE-EEECCEEEE---------------EEecCCCCcEEEcc
Confidence 4666677 999998753 89999999998886
No 66
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=29.52 E-value=42 Score=26.93 Aligned_cols=27 Identities=30% Similarity=0.528 Sum_probs=21.6
Q ss_pred eeEEEECCEEEEeeccceecccCCCCceEEccccceeecChh
Q 012359 304 LRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPE 345 (465)
Q Consensus 304 l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~ 345 (465)
+-.++|+|+.+. +++|||...+.|+..
T Consensus 24 ~v~i~I~G~~~~---------------~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 24 RITLKVGGQPVT---------------FLVDTGAQHSVLTQN 50 (132)
T ss_dssp EEEEEETTEEEE---------------EEECTTCSSCEECSC
T ss_pred EEEEEECCEEEE---------------EEEeCCCCeEEEccc
Confidence 345888998753 899999999999873
No 67
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=28.93 E-value=44 Score=31.24 Aligned_cols=17 Identities=18% Similarity=0.372 Sum_probs=14.4
Q ss_pred CceEEccccceeecChh
Q 012359 329 GGTIVDSGTTFTFMAPE 345 (465)
Q Consensus 329 ~~~iiDSGt~~~~lp~~ 345 (465)
..++||||++.+++|..
T Consensus 27 ~~v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 27 QTVIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEEEETTCCCEEEEEE
T ss_pred EEEEEeCCCCceEEecC
Confidence 34899999999999853
No 68
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=27.90 E-value=51 Score=30.63 Aligned_cols=16 Identities=19% Similarity=0.297 Sum_probs=14.2
Q ss_pred ceEEccccceeecChh
Q 012359 330 GTIVDSGTTFTFMAPE 345 (465)
Q Consensus 330 ~~iiDSGt~~~~lp~~ 345 (465)
.++||||++.+++|..
T Consensus 31 ~v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 31 NLDFDTGSSDLWIAST 46 (325)
T ss_dssp EEEEETTCCCCEEEBT
T ss_pred EEEEcCCCCCEEEccC
Confidence 4899999999999974
No 69
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=27.45 E-value=58 Score=30.20 Aligned_cols=18 Identities=17% Similarity=0.265 Sum_probs=15.2
Q ss_pred CceEEccccceeecChhh
Q 012359 329 GGTIVDSGTTFTFMAPEL 346 (465)
Q Consensus 329 ~~~iiDSGt~~~~lp~~~ 346 (465)
..++||||++.+++|...
T Consensus 27 ~~v~~DTGSs~~Wv~~~~ 44 (324)
T 1am5_A 27 FKVIFDTGSSNLWVSSSH 44 (324)
T ss_dssp EEEEEETTCCCEEECBTT
T ss_pred EEEEEeCCCcceEEecCC
Confidence 348999999999999753
No 70
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=27.29 E-value=48 Score=30.88 Aligned_cols=18 Identities=17% Similarity=0.278 Sum_probs=15.1
Q ss_pred CceEEccccceeecChhh
Q 012359 329 GGTIVDSGTTFTFMAPEL 346 (465)
Q Consensus 329 ~~~iiDSGt~~~~lp~~~ 346 (465)
..++||||++.+++|...
T Consensus 28 ~~v~~DTGSs~lWv~~~~ 45 (329)
T 1dpj_A 28 FKVILDTGSSNLWVPSNE 45 (329)
T ss_dssp EEEEEETTCCCEEEEBTT
T ss_pred EEEEEeCCCcCeEEecCC
Confidence 348999999999999753
No 71
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=27.26 E-value=27 Score=33.41 Aligned_cols=43 Identities=19% Similarity=0.292 Sum_probs=28.4
Q ss_pred eeeeccccCCcccccCCcceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChh
Q 012359 279 LTYTPFVNNPSVAERNAFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPE 345 (465)
Q Consensus 279 l~~~p~~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~ 345 (465)
+...|+.+.. +..|.++ |.||.... ...++||||++.+++|..
T Consensus 45 ~~~~~l~n~~--------d~~Y~~~---i~iGTPpQ-------------~~~v~~DTGSs~lWV~s~ 87 (370)
T 3psg_A 45 IGDEPLENYL--------DTEYFGT---IGIGTPAQ-------------DFTVIFDTGSSNLWVPSV 87 (370)
T ss_dssp SCCCTTGGGT--------TCCEEEE---EEETTTTE-------------EEEEEEETTCCCEEEEBT
T ss_pred cceecceecc--------CCEEEEE---EEEcCCCC-------------EEEEEEeCCCCccEEECC
Confidence 4556776543 3456655 67774221 134899999999999974
No 72
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=26.54 E-value=62 Score=30.24 Aligned_cols=17 Identities=24% Similarity=0.380 Sum_probs=14.3
Q ss_pred CceEEccccceeecChh
Q 012359 329 GGTIVDSGTTFTFMAPE 345 (465)
Q Consensus 329 ~~~iiDSGt~~~~lp~~ 345 (465)
..++||||++.+++|..
T Consensus 27 ~~v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 27 LNVIVDTGSSDLWIPDS 43 (342)
T ss_dssp EEEEEETTCCCEEEEEE
T ss_pred EEEEEeCCCCCeEEecC
Confidence 34899999999999853
No 73
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=25.87 E-value=48 Score=30.64 Aligned_cols=18 Identities=11% Similarity=0.189 Sum_probs=15.1
Q ss_pred CceEEccccceeecChhh
Q 012359 329 GGTIVDSGTTFTFMAPEL 346 (465)
Q Consensus 329 ~~~iiDSGt~~~~lp~~~ 346 (465)
..++||||++.+++|...
T Consensus 26 ~~v~~DTGSs~~Wv~~~~ 43 (320)
T 4aa9_A 26 FTVVFDTGSSDLWVPSIY 43 (320)
T ss_dssp EEEEEETTCCCEEEEBTT
T ss_pred EEEEEeCCCCceEEcCCC
Confidence 348999999999999753
No 74
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=24.38 E-value=50 Score=30.83 Aligned_cols=30 Identities=23% Similarity=0.224 Sum_probs=22.4
Q ss_pred eeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChh
Q 012359 298 VYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPE 345 (465)
Q Consensus 298 ~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~ 345 (465)
..|.++ |.||.+.+ .++||||++.+++|..
T Consensus 17 ~~Y~~~---i~iG~Q~~---------------~v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 17 TQYAGI---TKIGNQNF---------------LTVFDSTSCNVVVASQ 46 (330)
T ss_dssp TTSEEE---EEETTEEE---------------EEEEETTCCCEEEECT
T ss_pred CEEEEE---EEECCEEE---------------EEEEeCCCcceEEecC
Confidence 356554 77885543 4899999999999964
No 75
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=23.92 E-value=56 Score=31.32 Aligned_cols=19 Identities=11% Similarity=0.226 Sum_probs=15.7
Q ss_pred CceEEccccceeecChhhh
Q 012359 329 GGTIVDSGTTFTFMAPELF 347 (465)
Q Consensus 329 ~~~iiDSGt~~~~lp~~~~ 347 (465)
..++||||++.+++|....
T Consensus 76 f~vi~DTGSs~lWV~s~~C 94 (383)
T 2x0b_A 76 FKVVFDTGSSNVWVPSSKC 94 (383)
T ss_dssp EEEEEETTCCCEEEEBTTS
T ss_pred EEEEEeCCCCCeEEeccCC
Confidence 3499999999999997543
No 76
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=23.79 E-value=62 Score=30.19 Aligned_cols=17 Identities=24% Similarity=0.321 Sum_probs=14.4
Q ss_pred CceEEccccceeecChh
Q 012359 329 GGTIVDSGTTFTFMAPE 345 (465)
Q Consensus 329 ~~~iiDSGt~~~~lp~~ 345 (465)
..++||||++.+++|..
T Consensus 27 ~~v~~DTGSs~~Wv~~~ 43 (342)
T 3pvk_A 27 LNVIVDTGSSDLWVPDV 43 (342)
T ss_dssp EEEEEETTCCCEEEEEE
T ss_pred EEEEEECCCcceEEEcC
Confidence 34899999999999864
No 77
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=23.33 E-value=72 Score=29.69 Aligned_cols=18 Identities=11% Similarity=0.254 Sum_probs=15.1
Q ss_pred CceEEccccceeecChhh
Q 012359 329 GGTIVDSGTTFTFMAPEL 346 (465)
Q Consensus 329 ~~~iiDSGt~~~~lp~~~ 346 (465)
..++||||++.+++|...
T Consensus 33 ~~v~~DTGSs~~Wv~~~~ 50 (341)
T 3k1w_A 33 FKVVFDTGSSNVWVPSSK 50 (341)
T ss_dssp EEEEEETTCCCEEEEBTT
T ss_pred EEEEEeCCCcceEEccCC
Confidence 348999999999999653
No 78
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=23.00 E-value=72 Score=29.60 Aligned_cols=18 Identities=11% Similarity=0.163 Sum_probs=15.1
Q ss_pred CceEEccccceeecChhh
Q 012359 329 GGTIVDSGTTFTFMAPEL 346 (465)
Q Consensus 329 ~~~iiDSGt~~~~lp~~~ 346 (465)
..++||||++.+++|...
T Consensus 27 ~~v~~DTGSs~lWv~~~~ 44 (329)
T 1htr_B 27 FLVLFDTGSSNLWVPSVY 44 (329)
T ss_dssp EEEEEETTCCCEEEEBTT
T ss_pred EEEEEcCCCccEEEecCC
Confidence 348999999999999753
No 79
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=22.89 E-value=67 Score=30.88 Aligned_cols=17 Identities=18% Similarity=0.153 Sum_probs=14.6
Q ss_pred CceEEccccceeecChh
Q 012359 329 GGTIVDSGTTFTFMAPE 345 (465)
Q Consensus 329 ~~~iiDSGt~~~~lp~~ 345 (465)
..++||||++.+|+|-.
T Consensus 36 ~~v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 36 VPVLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEEEETTCSSEEEECS
T ss_pred eEEEEECCCCceeECCC
Confidence 34999999999999864
No 80
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=22.56 E-value=50 Score=32.09 Aligned_cols=44 Identities=20% Similarity=0.311 Sum_probs=28.6
Q ss_pred eeeeccccCCcccccCCcceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChh
Q 012359 279 LTYTPFVNNPSVAERNAFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPE 345 (465)
Q Consensus 279 l~~~p~~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~ 345 (465)
-..+|+..... ...|.++ |.+|.... ...++||||+.++|+|-+
T Consensus 8 ~~~~pv~~d~~-------~~~Y~~~---i~iGTPpq-------------~~~v~~DTGS~~lWv~c~ 51 (413)
T 3vla_A 8 ALVVPVKKDAS-------TLQYVTT---INQRTPLV-------------SENLVVDLGGRFLWVDCD 51 (413)
T ss_dssp EEEEEEEECTT-------TCCEEEE---EEETTTTE-------------EEEEEEETTCSSEEEECS
T ss_pred cEEEEeeecCC-------CCeEEEE---EEcCCCCc-------------ceEEEEeCCChhhhcccC
Confidence 34577776542 3456554 56665322 145999999999999963
No 81
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=22.35 E-value=74 Score=31.32 Aligned_cols=17 Identities=0% Similarity=0.030 Sum_probs=14.8
Q ss_pred CceEEccccceeecChh
Q 012359 329 GGTIVDSGTTFTFMAPE 345 (465)
Q Consensus 329 ~~~iiDSGt~~~~lp~~ 345 (465)
..++||||++.+++|..
T Consensus 152 ~~vi~DTGSs~lWV~s~ 168 (451)
T 3qvc_A 152 FNFLFHTASSNVWVPSI 168 (451)
T ss_dssp EEEEEESSBCSEEEEBT
T ss_pred EEEEEcCCCccEEEecC
Confidence 34899999999999975
No 82
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=21.47 E-value=66 Score=31.68 Aligned_cols=17 Identities=18% Similarity=0.233 Sum_probs=14.7
Q ss_pred CceEEccccceeecChh
Q 012359 329 GGTIVDSGTTFTFMAPE 345 (465)
Q Consensus 329 ~~~iiDSGt~~~~lp~~ 345 (465)
..++||||++.+++|..
T Consensus 153 ~~vi~DTGSs~lWV~~~ 169 (453)
T 2bju_A 153 FTFILDTGSANLWVPSV 169 (453)
T ss_dssp EEEEEETTCCCEEEEBT
T ss_pred EEEEEECCCcceEEecc
Confidence 34999999999999975
No 83
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=21.02 E-value=69 Score=31.77 Aligned_cols=17 Identities=18% Similarity=0.298 Sum_probs=14.6
Q ss_pred CceEEccccceeecChh
Q 012359 329 GGTIVDSGTTFTFMAPE 345 (465)
Q Consensus 329 ~~~iiDSGt~~~~lp~~ 345 (465)
..++||||++.+++|..
T Consensus 67 ~~v~~DTGSs~lWV~~~ 83 (478)
T 1qdm_A 67 FTVIFDTGSSNLWVPSA 83 (478)
T ss_dssp EEEEEETTCCCCEEEBT
T ss_pred EEEEEcCCCcceEEecC
Confidence 34899999999999875
No 84
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=20.99 E-value=58 Score=30.65 Aligned_cols=17 Identities=18% Similarity=0.261 Sum_probs=14.7
Q ss_pred CceEEccccceeecChh
Q 012359 329 GGTIVDSGTTFTFMAPE 345 (465)
Q Consensus 329 ~~~iiDSGt~~~~lp~~ 345 (465)
..++||||++.+++|..
T Consensus 38 ~~v~~DTGSs~lWv~~~ 54 (351)
T 1tzs_A 38 FTVIFDTGSSNLWVPSV 54 (351)
T ss_dssp EEEEEETTCCCEEEEBT
T ss_pred EEEEEeCCCcceEEecC
Confidence 34899999999999875
No 85
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=20.68 E-value=77 Score=27.79 Aligned_cols=32 Identities=19% Similarity=0.268 Sum_probs=24.2
Q ss_pred ccEEE---EEeeCCC----CcEEEEEEEcCCCceeEeCC
Q 012359 87 GGYSI---SLSFGTP----PQIIPFILDTGSHLVWFPCT 118 (465)
Q Consensus 87 ~~y~~---~i~iGtP----~q~~~v~iDTGS~~~Wv~~~ 118 (465)
+.|.+ .|.||.- .....+++|||+++++++..
T Consensus 99 ~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 99 AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 45655 4668752 34578999999999999976
Done!