Query 012362
Match_columns 465
No_of_seqs 190 out of 1297
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 01:50:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012362.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012362hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 6E-103 1E-107 789.6 34.7 401 31-459 39-452 (454)
2 PF00450 Peptidase_S10: Serine 100.0 7.1E-97 2E-101 762.0 25.5 391 31-454 6-415 (415)
3 PTZ00472 serine carboxypeptida 100.0 2.5E-94 5.4E-99 744.5 37.2 394 24-456 35-460 (462)
4 PLN03016 sinapoylglucose-malat 100.0 8.7E-93 1.9E-97 724.2 34.4 380 32-456 33-432 (433)
5 PLN02209 serine carboxypeptida 100.0 5E-91 1.1E-95 711.2 37.6 383 31-456 34-436 (437)
6 KOG1283 Serine carboxypeptidas 100.0 1.9E-84 4.2E-89 604.8 19.2 412 34-454 1-413 (414)
7 PLN02213 sinapoylglucose-malat 100.0 1.7E-70 3.7E-75 543.8 26.1 310 107-456 1-318 (319)
8 COG2939 Carboxypeptidase C (ca 100.0 1.3E-68 2.8E-73 533.6 21.4 389 34-455 74-491 (498)
9 TIGR03611 RutD pyrimidine util 99.3 4E-11 8.7E-16 113.9 15.9 105 67-204 13-117 (257)
10 TIGR01250 pro_imino_pep_2 prol 99.3 2.6E-10 5.5E-15 110.0 19.0 128 37-203 3-132 (288)
11 PLN02824 hydrolase, alpha/beta 99.2 1.8E-09 4E-14 106.0 21.1 124 38-202 10-137 (294)
12 PRK10673 acyl-CoA esterase; Pr 99.2 6.5E-10 1.4E-14 106.3 15.0 99 67-200 16-114 (255)
13 PHA02857 monoglyceride lipase; 99.2 2.2E-09 4.8E-14 104.3 18.6 125 44-203 8-133 (276)
14 PRK00870 haloalkane dehalogena 99.1 8.2E-09 1.8E-13 101.9 20.4 132 30-201 13-149 (302)
15 TIGR03056 bchO_mg_che_rel puta 99.1 2E-09 4.2E-14 104.0 15.4 105 67-204 28-132 (278)
16 PLN02298 hydrolase, alpha/beta 99.1 3.7E-08 7.9E-13 98.5 23.3 135 37-203 33-170 (330)
17 PRK03204 haloalkane dehalogena 99.1 2.9E-09 6.3E-14 104.4 15.0 123 36-202 14-136 (286)
18 PLN02385 hydrolase; alpha/beta 99.0 1.3E-08 2.9E-13 102.6 18.1 127 45-202 70-197 (349)
19 PLN02578 hydrolase 99.0 4.5E-08 9.8E-13 99.0 21.3 100 68-201 87-186 (354)
20 PLN02679 hydrolase, alpha/beta 99.0 3E-08 6.6E-13 100.5 19.1 102 68-201 89-190 (360)
21 PRK06489 hypothetical protein; 99.0 1.7E-07 3.8E-12 95.0 24.7 112 67-200 69-187 (360)
22 TIGR02427 protocat_pcaD 3-oxoa 99.0 3E-08 6.5E-13 93.2 16.5 100 67-200 13-112 (251)
23 PLN02894 hydrolase, alpha/beta 98.9 9.6E-08 2.1E-12 98.2 20.9 144 23-202 66-211 (402)
24 TIGR03343 biphenyl_bphD 2-hydr 98.9 1.8E-07 3.9E-12 90.9 21.8 61 363-454 222-282 (282)
25 PRK10349 carboxylesterase BioH 98.9 1.1E-08 2.4E-13 98.2 13.0 94 68-200 14-107 (256)
26 PF12697 Abhydrolase_6: Alpha/ 98.9 2.1E-08 4.7E-13 92.4 14.1 103 70-204 1-103 (228)
27 PRK03592 haloalkane dehalogena 98.9 7.6E-09 1.6E-13 101.7 11.7 103 68-204 28-130 (295)
28 TIGR02240 PHA_depoly_arom poly 98.9 3.7E-08 8E-13 95.9 14.5 121 41-203 7-127 (276)
29 PRK10749 lysophospholipase L2; 98.9 1.3E-07 2.9E-12 94.6 18.8 130 39-202 33-166 (330)
30 PLN03084 alpha/beta hydrolase 98.9 4.8E-08 1E-12 99.5 15.3 105 67-202 127-232 (383)
31 TIGR01738 bioH putative pimelo 98.9 3.9E-08 8.5E-13 92.1 13.6 60 362-452 186-245 (245)
32 PLN02652 hydrolase; alpha/beta 98.8 4.3E-07 9.4E-12 93.0 21.8 126 46-203 120-246 (395)
33 KOG4178 Soluble epoxide hydrol 98.8 2.1E-07 4.5E-12 90.2 18.2 135 36-206 22-157 (322)
34 PRK11126 2-succinyl-6-hydroxy- 98.8 8.2E-08 1.8E-12 91.1 15.0 100 67-201 2-101 (242)
35 PLN03087 BODYGUARD 1 domain co 98.8 1E-06 2.3E-11 91.9 23.9 132 36-200 176-307 (481)
36 KOG4409 Predicted hydrolase/ac 98.8 2.2E-07 4.8E-12 90.4 16.8 131 38-204 67-197 (365)
37 TIGR03695 menH_SHCHC 2-succiny 98.8 1.9E-07 4.2E-12 87.3 14.5 104 68-202 2-105 (251)
38 PLN02965 Probable pheophorbida 98.6 8.3E-07 1.8E-11 85.3 15.5 100 70-201 6-106 (255)
39 PRK07581 hypothetical protein; 98.6 5.3E-06 1.2E-10 83.3 20.4 59 364-453 275-334 (339)
40 PLN02980 2-oxoglutarate decarb 98.6 1.7E-06 3.7E-11 103.0 19.0 103 67-200 1371-1478(1655)
41 PRK14875 acetoin dehydrogenase 98.5 2.5E-06 5.5E-11 86.3 16.7 101 67-201 131-231 (371)
42 PRK08775 homoserine O-acetyltr 98.5 5.1E-06 1.1E-10 83.7 17.7 62 364-455 277-339 (343)
43 TIGR01607 PST-A Plasmodium sub 98.4 4.1E-05 8.8E-10 76.8 21.1 144 46-203 7-186 (332)
44 KOG1454 Predicted hydrolase/ac 98.4 6.7E-06 1.4E-10 82.0 15.1 61 364-455 264-324 (326)
45 PRK00175 metX homoserine O-ace 98.4 4.4E-05 9.5E-10 78.0 21.0 65 364-455 309-374 (379)
46 COG1506 DAP2 Dipeptidyl aminop 98.3 4.9E-06 1.1E-10 90.4 13.5 116 44-177 373-492 (620)
47 TIGR01249 pro_imino_pep_1 prol 98.3 3.1E-06 6.8E-11 83.7 9.9 125 38-203 6-131 (306)
48 PLN02511 hydrolase 98.2 3.8E-05 8.3E-10 78.7 16.6 118 39-177 74-192 (388)
49 PRK05855 short chain dehydroge 98.1 0.00012 2.6E-09 78.7 18.1 87 67-175 25-111 (582)
50 PRK10566 esterase; Provisional 98.1 0.00012 2.6E-09 69.8 15.5 96 67-178 27-127 (249)
51 COG2267 PldB Lysophospholipase 98.0 0.00024 5.2E-09 70.1 16.9 134 36-204 9-144 (298)
52 TIGR01392 homoserO_Ac_trn homo 98.0 0.0014 3E-08 66.2 22.1 63 364-453 288-351 (351)
53 TIGR03100 hydr1_PEP hydrolase, 97.9 0.0003 6.5E-09 68.5 15.3 108 68-203 27-135 (274)
54 PF00561 Abhydrolase_1: alpha/ 97.9 4E-05 8.7E-10 71.3 7.9 56 363-449 174-229 (230)
55 PF10340 DUF2424: Protein of u 97.8 9.9E-05 2.1E-09 73.9 9.4 135 48-206 105-239 (374)
56 PLN02872 triacylglycerol lipas 97.7 0.0022 4.7E-08 65.8 17.3 127 33-173 41-175 (395)
57 PF00326 Peptidase_S9: Prolyl 97.7 0.00039 8.4E-09 64.8 10.6 90 106-205 13-102 (213)
58 PRK06765 homoserine O-acetyltr 97.6 0.014 3.1E-07 59.7 22.0 66 362-454 321-387 (389)
59 TIGR03101 hydr2_PEP hydrolase, 97.5 0.00054 1.2E-08 66.3 9.5 127 47-205 10-137 (266)
60 PLN02211 methyl indole-3-aceta 97.5 0.00035 7.6E-09 68.0 7.9 104 66-201 17-121 (273)
61 PRK05077 frsA fermentation/res 97.3 0.00096 2.1E-08 69.0 8.8 79 108-203 223-301 (414)
62 TIGR01840 esterase_phb esteras 97.2 0.00096 2.1E-08 62.3 7.6 110 66-201 12-129 (212)
63 KOG2382 Predicted alpha/beta h 96.9 0.014 2.9E-07 57.2 12.6 53 109-169 82-134 (315)
64 cd00707 Pancreat_lipase_like P 96.8 0.0017 3.8E-08 63.2 4.9 107 67-200 36-145 (275)
65 KOG2564 Predicted acetyltransf 96.7 0.005 1.1E-07 58.6 7.5 106 64-197 71-177 (343)
66 COG0596 MhpC Predicted hydrola 96.7 0.0047 1E-07 57.1 7.0 104 68-204 22-125 (282)
67 TIGR02821 fghA_ester_D S-formy 96.7 0.012 2.7E-07 57.2 10.1 41 155-204 135-175 (275)
68 COG3509 LpqC Poly(3-hydroxybut 96.6 0.019 4.1E-07 55.4 10.7 161 5-202 8-179 (312)
69 PLN02442 S-formylglutathione h 96.6 0.01 2.2E-07 58.1 9.0 56 137-204 125-180 (283)
70 KOG1455 Lysophospholipase [Lip 96.6 0.014 3.1E-07 56.4 9.5 119 39-178 30-149 (313)
71 TIGR03230 lipo_lipase lipoprot 96.5 0.01 2.2E-07 61.4 8.4 80 107-200 73-152 (442)
72 KOG1515 Arylacetamide deacetyl 96.3 0.03 6.5E-07 55.9 10.6 144 39-204 64-209 (336)
73 PRK13604 luxD acyl transferase 96.2 0.25 5.4E-06 48.7 16.0 128 42-203 15-142 (307)
74 PF00975 Thioesterase: Thioest 96.0 0.021 4.6E-07 53.4 7.2 102 69-202 2-104 (229)
75 PRK10985 putative hydrolase; P 95.8 0.11 2.4E-06 51.7 11.8 115 38-176 33-149 (324)
76 PF08386 Abhydrolase_4: TAP-li 95.6 0.045 9.8E-07 44.9 6.9 65 364-459 34-98 (103)
77 TIGR00976 /NonD putative hydro 95.5 0.05 1.1E-06 58.5 8.9 132 43-205 3-135 (550)
78 TIGR01838 PHA_synth_I poly(R)- 95.4 0.52 1.1E-05 50.2 15.8 83 108-204 221-304 (532)
79 PF06500 DUF1100: Alpha/beta h 95.4 0.019 4.1E-07 58.4 4.6 82 106-204 217-298 (411)
80 PRK10162 acetyl esterase; Prov 94.9 0.069 1.5E-06 53.1 7.2 44 157-203 153-196 (318)
81 PLN00021 chlorophyllase 94.7 0.06 1.3E-06 53.5 6.1 111 67-203 52-167 (313)
82 KOG4391 Predicted alpha/beta h 94.7 0.03 6.4E-07 51.5 3.4 105 67-204 78-186 (300)
83 PRK11071 esterase YqiA; Provis 94.5 0.06 1.3E-06 49.3 5.1 55 363-453 135-189 (190)
84 PRK11460 putative hydrolase; P 94.3 0.24 5.2E-06 46.9 8.9 39 155-202 100-138 (232)
85 PRK10115 protease 2; Provision 94.2 0.13 2.9E-06 56.7 7.9 114 67-205 445-562 (686)
86 PF10230 DUF2305: Uncharacteri 94.2 0.12 2.7E-06 50.0 6.7 113 67-200 2-120 (266)
87 PF12695 Abhydrolase_5: Alpha/ 94.0 0.052 1.1E-06 46.5 3.5 93 69-201 1-94 (145)
88 PF03583 LIP: Secretory lipase 93.9 2.7 5.8E-05 41.3 15.7 68 364-458 219-288 (290)
89 PRK05371 x-prolyl-dipeptidyl a 93.7 1.4 2.9E-05 49.4 14.5 85 106-205 278-376 (767)
90 PF10503 Esterase_phd: Esteras 93.6 0.22 4.8E-06 46.8 7.1 40 154-202 93-132 (220)
91 KOG2100 Dipeptidyl aminopeptid 93.4 0.22 4.9E-06 55.4 7.8 120 36-175 498-625 (755)
92 cd00312 Esterase_lipase Estera 92.9 0.35 7.5E-06 51.1 8.2 35 141-176 160-194 (493)
93 PF07519 Tannase: Tannase and 92.3 4.4 9.6E-05 42.7 15.3 87 353-459 342-431 (474)
94 PLN02454 triacylglycerol lipas 90.8 0.64 1.4E-05 47.5 6.8 70 133-204 204-273 (414)
95 PLN02211 methyl indole-3-aceta 90.5 0.69 1.5E-05 44.9 6.6 59 364-454 211-269 (273)
96 TIGR03502 lipase_Pla1_cef extr 90.3 0.76 1.6E-05 51.0 7.4 99 65-178 447-575 (792)
97 PRK11460 putative hydrolase; P 90.0 0.66 1.4E-05 43.9 5.9 62 364-452 148-209 (232)
98 COG0400 Predicted esterase [Ge 89.7 3.5 7.5E-05 38.3 10.2 97 116-222 58-158 (207)
99 COG4099 Predicted peptidase [G 89.5 4.7 0.0001 39.2 11.0 114 46-181 171-292 (387)
100 PF02230 Abhydrolase_2: Phosph 89.2 0.22 4.9E-06 46.4 2.0 59 364-453 155-213 (216)
101 PF07859 Abhydrolase_3: alpha/ 89.0 0.38 8.2E-06 44.3 3.3 65 135-204 46-112 (211)
102 COG0596 MhpC Predicted hydrola 88.6 1.3 2.8E-05 40.4 6.8 64 360-453 217-280 (282)
103 KOG1838 Alpha/beta hydrolase [ 88.1 2.2 4.8E-05 43.5 8.3 108 66-202 124-236 (409)
104 TIGR01249 pro_imino_pep_1 prol 87.5 2 4.2E-05 42.3 7.6 43 364-437 248-290 (306)
105 PF01764 Lipase_3: Lipase (cla 85.8 1.4 2.9E-05 37.7 4.8 62 136-202 45-106 (140)
106 PF02230 Abhydrolase_2: Phosph 85.5 1.7 3.8E-05 40.3 5.7 54 138-202 87-140 (216)
107 PF12695 Abhydrolase_5: Alpha/ 85.5 1.8 3.9E-05 36.7 5.4 33 359-391 99-131 (145)
108 TIGR01836 PHA_synth_III_C poly 85.2 2 4.3E-05 43.2 6.3 62 363-454 285-349 (350)
109 PF11288 DUF3089: Protein of u 84.7 1.6 3.4E-05 40.5 4.8 43 134-178 73-115 (207)
110 PLN02571 triacylglycerol lipas 84.6 2.6 5.7E-05 43.2 6.8 69 135-204 204-277 (413)
111 PF05728 UPF0227: Uncharacteri 83.8 2.3 5E-05 38.8 5.5 37 157-205 58-94 (187)
112 PF11144 DUF2920: Protein of u 83.4 2.3 5.1E-05 43.2 5.8 62 135-205 160-222 (403)
113 KOG3975 Uncharacterized conser 82.8 1.9 4.1E-05 40.9 4.5 96 65-176 27-128 (301)
114 cd00741 Lipase Lipase. Lipase 82.5 2.6 5.6E-05 36.8 5.2 43 136-181 9-51 (153)
115 COG2272 PnbA Carboxylesterase 82.4 3 6.5E-05 43.4 6.2 32 143-175 166-197 (491)
116 PF05990 DUF900: Alpha/beta hy 81.5 2.6 5.5E-05 40.0 5.1 69 134-205 72-140 (233)
117 PF03283 PAE: Pectinacetyleste 81.4 6.1 0.00013 40.1 8.0 127 68-203 51-198 (361)
118 PF06057 VirJ: Bacterial virul 80.9 3.9 8.6E-05 37.3 5.8 61 131-199 44-104 (192)
119 PRK10985 putative hydrolase; P 80.8 4.2 9.2E-05 40.3 6.7 46 364-440 255-300 (324)
120 cd00519 Lipase_3 Lipase (class 80.0 4.2 9.1E-05 38.1 6.0 63 134-203 107-169 (229)
121 PRK04940 hypothetical protein; 79.6 4.9 0.00011 36.4 5.9 59 132-205 37-95 (180)
122 COG0400 Predicted esterase [Ge 79.4 3.7 8E-05 38.1 5.3 60 363-454 145-204 (207)
123 PF00151 Lipase: Lipase; Inte 79.4 1.1 2.3E-05 45.0 1.8 71 106-181 103-173 (331)
124 PRK10252 entF enterobactin syn 78.3 4.9 0.00011 47.8 7.2 101 68-200 1069-1169(1296)
125 PF05577 Peptidase_S28: Serine 78.3 4.3 9.4E-05 42.1 6.0 65 132-205 87-151 (434)
126 PF02129 Peptidase_S15: X-Pro 78.0 2.2 4.8E-05 41.2 3.5 85 106-206 56-140 (272)
127 COG0657 Aes Esterase/lipase [L 77.9 9.6 0.00021 37.5 8.1 44 157-205 151-194 (312)
128 PRK10439 enterobactin/ferric e 77.4 3.7 8.1E-05 42.4 5.1 35 158-201 288-322 (411)
129 PLN02733 phosphatidylcholine-s 75.8 5.3 0.00012 41.6 5.8 42 134-178 141-182 (440)
130 PF06342 DUF1057: Alpha/beta h 75.7 21 0.00045 34.7 9.2 96 353-452 201-296 (297)
131 PF05677 DUF818: Chlamydia CHL 75.5 7.7 0.00017 38.6 6.4 61 106-174 170-231 (365)
132 KOG2183 Prolylcarboxypeptidase 74.6 4.5 9.7E-05 41.2 4.6 68 107-176 111-185 (492)
133 PLN02324 triacylglycerol lipas 74.0 9.9 0.00021 39.0 7.0 48 133-181 191-238 (415)
134 PLN02753 triacylglycerol lipas 72.8 9.6 0.00021 40.2 6.7 72 133-204 285-361 (531)
135 PRK05077 frsA fermentation/res 72.5 9 0.00019 39.6 6.5 58 364-455 355-412 (414)
136 PLN02719 triacylglycerol lipas 71.7 6.9 0.00015 41.1 5.3 71 134-204 272-347 (518)
137 KOG4627 Kynurenine formamidase 71.1 3.2 7E-05 38.2 2.4 71 118-202 102-172 (270)
138 PLN02761 lipase class 3 family 70.5 12 0.00026 39.5 6.7 72 133-204 266-344 (527)
139 KOG2281 Dipeptidyl aminopeptid 70.0 19 0.00042 38.8 8.1 130 48-207 624-767 (867)
140 COG0627 Predicted esterase [Ge 70.0 11 0.00023 37.6 6.0 125 65-205 52-190 (316)
141 KOG1552 Predicted alpha/beta h 69.9 7.3 0.00016 37.2 4.7 101 67-203 60-164 (258)
142 TIGR01836 PHA_synth_III_C poly 69.3 8.4 0.00018 38.6 5.4 78 108-204 95-173 (350)
143 PF10081 Abhydrolase_9: Alpha/ 67.8 9.9 0.00021 36.8 5.1 38 133-170 84-121 (289)
144 COG3208 GrsT Predicted thioest 67.6 21 0.00045 33.9 7.1 86 68-181 8-97 (244)
145 PF11187 DUF2974: Protein of u 67.5 12 0.00027 35.1 5.7 50 142-200 72-121 (224)
146 KOG3724 Negative regulator of 67.0 57 0.0012 36.3 10.9 159 5-176 19-200 (973)
147 PLN02934 triacylglycerol lipas 65.4 15 0.00033 38.6 6.3 40 139-181 305-344 (515)
148 PLN02408 phospholipase A1 64.0 12 0.00026 37.8 5.2 46 135-181 178-223 (365)
149 smart00824 PKS_TE Thioesterase 63.0 25 0.00054 31.3 6.8 76 106-199 24-99 (212)
150 PF08237 PE-PPE: PE-PPE domain 63.0 22 0.00049 33.4 6.5 87 109-202 4-90 (225)
151 PF08840 BAAT_C: BAAT / Acyl-C 62.5 12 0.00025 34.9 4.6 45 147-201 11-55 (213)
152 PLN00413 triacylglycerol lipas 60.4 13 0.00028 38.8 4.7 39 139-180 268-306 (479)
153 PRK14567 triosephosphate isome 60.2 17 0.00037 34.8 5.2 62 135-206 178-239 (253)
154 PF05057 DUF676: Putative seri 59.5 17 0.00036 33.9 5.0 48 133-181 54-101 (217)
155 PLN02802 triacylglycerol lipas 58.1 25 0.00055 37.0 6.4 65 136-204 309-373 (509)
156 COG3319 Thioesterase domains o 57.9 33 0.00071 33.0 6.8 87 68-181 1-88 (257)
157 PLN02310 triacylglycerol lipas 57.3 28 0.0006 35.8 6.4 65 135-203 185-250 (405)
158 PRK11071 esterase YqiA; Provis 57.3 23 0.00051 32.1 5.5 76 68-178 2-81 (190)
159 PRK14566 triosephosphate isome 57.0 19 0.00041 34.7 4.9 61 135-205 188-248 (260)
160 KOG3079 Uridylate kinase/adeny 55.7 7.2 0.00016 35.4 1.7 14 67-80 7-20 (195)
161 KOG1552 Predicted alpha/beta h 55.3 29 0.00063 33.2 5.7 63 364-457 192-254 (258)
162 PF08840 BAAT_C: BAAT / Acyl-C 53.6 16 0.00034 34.0 3.7 48 364-436 115-163 (213)
163 PLN02162 triacylglycerol lipas 53.2 20 0.00044 37.3 4.7 40 139-181 262-301 (475)
164 PF05436 MF_alpha_N: Mating fa 52.1 21 0.00046 28.0 3.6 44 4-47 3-48 (86)
165 PRK10259 hypothetical protein; 51.2 15 0.00032 29.0 2.6 44 1-45 1-44 (86)
166 COG4757 Predicted alpha/beta h 50.8 28 0.00061 32.9 4.8 66 107-176 57-123 (281)
167 PRK07868 acyl-CoA synthetase; 48.5 31 0.00068 40.0 5.9 62 364-456 297-362 (994)
168 PLN02429 triosephosphate isome 48.3 32 0.00069 34.1 5.1 62 135-206 238-300 (315)
169 PLN03037 lipase class 3 family 48.1 29 0.00063 36.6 5.0 46 136-181 295-341 (525)
170 PF12146 Hydrolase_4: Putative 46.6 48 0.001 25.4 4.9 77 48-146 3-79 (79)
171 COG2945 Predicted hydrolase of 46.5 23 0.0005 32.4 3.5 62 110-179 63-124 (210)
172 COG1073 Hydrolases of the alph 45.0 47 0.001 31.4 5.8 61 365-454 233-296 (299)
173 KOG4569 Predicted lipase [Lipi 44.9 37 0.0008 34.1 5.1 60 139-203 155-214 (336)
174 PF06821 Ser_hydrolase: Serine 44.5 40 0.00086 30.2 4.7 43 365-439 115-157 (171)
175 KOG1553 Predicted alpha/beta h 43.9 2.5E+02 0.0053 28.4 10.2 96 67-197 243-340 (517)
176 PF03959 FSH1: Serine hydrolas 43.7 24 0.00053 32.6 3.4 49 364-443 161-209 (212)
177 PF05448 AXE1: Acetyl xylan es 43.4 55 0.0012 32.6 6.0 56 137-203 155-210 (320)
178 PLN02561 triosephosphate isome 43.0 42 0.0009 32.2 4.8 61 134-204 178-239 (253)
179 PLN02442 S-formylglutathione h 41.9 46 0.001 32.3 5.2 48 363-437 216-264 (283)
180 PLN02847 triacylglycerol lipas 41.9 36 0.00077 36.7 4.5 63 136-205 232-295 (633)
181 COG5510 Predicted small secret 41.4 22 0.00047 24.0 1.8 21 1-21 2-22 (44)
182 KOG3101 Esterase D [General fu 41.0 28 0.0006 32.4 3.1 41 158-207 141-181 (283)
183 PF01083 Cutinase: Cutinase; 39.5 53 0.0011 29.6 4.8 81 109-203 41-124 (179)
184 PF06259 Abhydrolase_8: Alpha/ 39.4 42 0.00092 30.3 4.1 62 106-175 62-126 (177)
185 PRK07868 acyl-CoA synthetase; 38.5 82 0.0018 36.6 7.3 90 66-178 66-161 (994)
186 PF02450 LCAT: Lecithin:choles 37.6 48 0.001 34.0 4.7 41 140-180 101-141 (389)
187 KOG2369 Lecithin:cholesterol a 36.9 47 0.001 34.6 4.4 73 365-455 374-452 (473)
188 cd00311 TIM Triosephosphate is 36.4 58 0.0013 31.0 4.7 60 136-206 176-236 (242)
189 KOG2551 Phospholipase/carboxyh 36.3 85 0.0018 29.4 5.6 58 364-453 163-222 (230)
190 PRK00042 tpiA triosephosphate 36.2 72 0.0016 30.6 5.3 61 135-206 179-240 (250)
191 PF01738 DLH: Dienelactone hyd 34.0 1.7E+02 0.0038 26.6 7.6 62 363-451 144-210 (218)
192 COG3571 Predicted hydrolase of 34.0 29 0.00062 30.9 2.0 26 155-180 86-111 (213)
193 KOG1516 Carboxylesterase and r 33.6 1.2E+02 0.0025 32.5 7.1 33 143-176 181-213 (545)
194 PTZ00333 triosephosphate isome 33.6 69 0.0015 30.8 4.8 61 134-204 181-242 (255)
195 PF03403 PAF-AH_p_II: Platelet 33.5 25 0.00054 35.9 1.9 39 158-206 228-266 (379)
196 PF03096 Ndr: Ndr family; Int 33.0 26 0.00056 34.1 1.8 117 62-204 18-136 (283)
197 KOG3043 Predicted hydrolase re 32.7 1E+02 0.0022 29.0 5.5 33 359-391 159-191 (242)
198 PF07819 PGAP1: PGAP1-like pro 32.4 81 0.0018 29.5 5.0 42 134-175 59-102 (225)
199 PF14020 DUF4236: Protein of u 32.1 25 0.00055 25.2 1.1 15 109-124 40-54 (55)
200 COG3208 GrsT Predicted thioest 31.7 96 0.0021 29.5 5.2 60 364-454 176-235 (244)
201 PF10503 Esterase_phd: Esteras 31.5 43 0.00094 31.4 2.9 27 364-390 169-195 (220)
202 PF06309 Torsin: Torsin; Inte 31.5 40 0.00086 28.7 2.4 14 67-80 52-65 (127)
203 PF01738 DLH: Dienelactone hyd 31.4 48 0.001 30.5 3.3 43 134-177 75-117 (218)
204 PF07389 DUF1500: Protein of u 30.9 41 0.00088 26.4 2.1 28 139-168 7-34 (100)
205 COG2945 Predicted hydrolase of 30.3 39 0.00085 31.0 2.3 58 363-453 148-205 (210)
206 PRK14565 triosephosphate isome 30.2 82 0.0018 29.9 4.6 55 134-206 172-226 (237)
207 COG5153 CVT17 Putative lipase 29.5 36 0.00078 33.1 2.0 34 143-176 261-294 (425)
208 KOG4540 Putative lipase essent 29.5 36 0.00078 33.1 2.0 34 143-176 261-294 (425)
209 KOG3877 NADH:ubiquinone oxidor 29.0 52 0.0011 32.0 3.0 52 103-171 66-117 (393)
210 PF12740 Chlorophyllase2: Chlo 28.6 1.2E+02 0.0027 29.2 5.5 63 133-201 62-130 (259)
211 COG0429 Predicted hydrolase of 28.5 93 0.002 31.1 4.7 106 67-201 75-185 (345)
212 PF09292 Neil1-DNA_bind: Endon 27.7 37 0.0008 22.1 1.2 11 68-78 25-35 (39)
213 PRK06762 hypothetical protein; 27.7 36 0.00077 29.8 1.6 14 68-81 2-15 (166)
214 PF12273 RCR: Chitin synthesis 27.6 33 0.00071 29.2 1.3 36 6-42 6-41 (130)
215 PLN02517 phosphatidylcholine-s 26.1 1E+02 0.0022 33.4 4.8 38 141-178 195-233 (642)
216 PF00756 Esterase: Putative es 25.4 34 0.00074 32.1 1.1 56 137-205 98-153 (251)
217 KOG3253 Predicted alpha/beta h 24.6 1.3E+02 0.0029 32.5 5.3 34 358-391 298-331 (784)
218 PF08538 DUF1749: Protein of u 24.6 5E+02 0.011 25.7 9.0 71 131-205 80-151 (303)
219 PF01583 APS_kinase: Adenylyls 23.7 46 0.001 29.4 1.6 14 67-80 1-14 (156)
220 PF00121 TIM: Triosephosphate 23.7 31 0.00067 32.9 0.5 63 134-206 176-239 (244)
221 COG4425 Predicted membrane pro 23.6 1E+02 0.0022 32.0 4.1 38 133-170 372-409 (588)
222 PF11777 DUF3316: Protein of u 23.2 88 0.0019 25.9 3.1 19 1-19 1-19 (114)
223 PF04414 tRNA_deacylase: D-ami 22.8 2.1E+02 0.0045 26.7 5.7 114 48-181 16-151 (213)
224 TIGR01840 esterase_phb esteras 22.8 63 0.0014 29.6 2.4 29 365-393 169-197 (212)
225 TIGR02052 MerP mercuric transp 22.7 50 0.0011 24.8 1.4 16 1-16 1-16 (92)
226 COG0412 Dienelactone hydrolase 22.7 1.4E+02 0.003 28.2 4.7 44 134-178 89-132 (236)
227 PF04202 Mfp-3: Foot protein 3 22.2 74 0.0016 23.5 2.0 22 1-23 1-22 (71)
228 PF08060 NOSIC: NOSIC (NUC001) 21.7 92 0.002 22.0 2.5 22 135-156 13-35 (53)
229 PF15253 STIL_N: SCL-interrupt 21.0 1.2E+02 0.0026 31.2 4.0 39 31-75 195-235 (410)
230 PRK13962 bifunctional phosphog 20.6 1.4E+02 0.0029 32.9 4.6 62 135-206 574-636 (645)
231 COG4569 MhpF Acetaldehyde dehy 20.3 83 0.0018 29.0 2.5 82 100-199 25-108 (310)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=6.3e-103 Score=789.57 Aligned_cols=401 Identities=26% Similarity=0.450 Sum_probs=329.3
Q ss_pred CCCCCceeeeeEeCC--CceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCccc-----CCCCCCc
Q 012362 31 NQDASEEWGYVEVRP--KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY-----LKPRNST 103 (465)
Q Consensus 31 ~~~~~~~sGyv~v~~--~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~-----l~~~~~s 103 (465)
.+++++|+|||+|+. +++||||||||+ ++|+++ ||||||||||||||++ |+|+|+|||+++ |..|+||
T Consensus 39 ~~~f~~ysGYv~v~~~~~~~LFYwf~eS~---~~P~~d-PlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~yS 113 (454)
T KOG1282|consen 39 PLPFKQYSGYVTVNESEGRQLFYWFFESE---NNPETD-PLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYS 113 (454)
T ss_pred CCCcccccceEECCCCCCceEEEEEEEcc---CCCCCC-CEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCcc
Confidence 345889999999984 579999999996 578765 9999999999999995 999999999986 6779999
Q ss_pred hhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHH
Q 012362 104 WLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAI 183 (465)
Q Consensus 104 w~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~ 183 (465)
||+.||||||||||||||||+++...+.++++.+|+|++.||++||++||||++|||||+||||||||||+||++|++.|
T Consensus 114 Wnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N 193 (454)
T KOG1282|consen 114 WNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGN 193 (454)
T ss_pred ccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhcc
Confidence 99999999999999999999998877778999999999999999999999999999999999999999999999999998
Q ss_pred HcC-cceeeeeeEEccCCCCCcccc-cccchhhhccCCCChhHHHHHHHHHHHHHHHHHcCCCcCchhHHHHHHHHHH-h
Q 012362 184 EAG-KLKLKLGGVALGDSWISPEDF-FSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESVIS-Q 260 (465)
Q Consensus 184 ~~~-~~~inLkGi~IGNg~~~p~~~-~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-~ 260 (465)
+.. ...|||||++||||++|+..+ .++.+|++.+++|++..++.+++.|+.+... -.+.......|..+...+. .
T Consensus 194 ~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~--~~~~~~~~~~C~~~~~~~~~~ 271 (454)
T KOG1282|consen 194 KKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDN--YANVDPSNTKCNKAVEEFDSK 271 (454)
T ss_pred ccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCccc--ccccCCchhHHHHHHHHHHHH
Confidence 763 568999999999999999988 8899999999999998776665532222110 0111122445766666554 5
Q ss_pred hCCCCccccccccCCCCCcccccccccccccchhhhhhcccCCCCCCCCCchhhhhccH-HHHHHhccCCCCc-cccccC
Q 012362 261 NSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNG-VIKKKLKIIPENI-TWGGQS 338 (465)
Q Consensus 261 ~~~~~~~yn~~~~~~~~p~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~~~~v~~~lN~-~Vk~aL~i~p~~~-~w~~cs 338 (465)
....++.|+++.+.|....... . ..... ....||..+..+.|||+ +||+|||+..... +|+.||
T Consensus 272 ~~~~i~~y~i~~~~C~~~~~~~--~-----~~~~~-------~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~~W~~Cn 337 (454)
T KOG1282|consen 272 TTGDIDNYYILTPDCYPTSYEL--K-----KPTDC-------YGYDPCLSDYAEKYLNRPEVRKALHANKTSIGKWERCN 337 (454)
T ss_pred HhccCchhhhcchhhccccccc--c-----ccccc-------cccCCchhhhHHHhcCCHHHHHHhCCCCCCCCcccccC
Confidence 5567888888877665311000 0 00000 01245655555889999 5999999866555 799999
Q ss_pred hhHhhhccCCCCcccHHHHHHHHhcC-CeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEE
Q 012362 339 DSVFTELSGDFMRPRISEVDELLAKG-VNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGF 417 (465)
Q Consensus 339 ~~V~~~~~~D~~~~~~~~l~~LL~~~-irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~ 417 (465)
+.|+..+. |...++++.+..++.++ +|||||+||.|++||++||++||++|+++. .++++||++++ +|++||
T Consensus 338 ~~v~~~~~-~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~-----~~~~~pW~~~~-~qvaG~ 410 (454)
T KOG1282|consen 338 DEVNYNYN-DDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSI-----TDEWRPWYHKG-GQVAGY 410 (454)
T ss_pred hhhhcccc-cCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCcc-----ccCccCCccCC-Cceeee
Confidence 99987643 44667777888888865 999999999999999999999999999654 45568999743 689999
Q ss_pred EEEECCeEEEEEcCcccccCCcChHHHHHHHHHHhcCCCccc
Q 012362 418 KKSYKNLHFYWILGAGHFVPVDQPCIALNMLAAMTDSPASAS 459 (465)
Q Consensus 418 ~k~~~nLtfv~V~~AGHmvP~DqP~~a~~mi~~fl~~~~~~~ 459 (465)
+++|++|||+||+|||||||.|||++|++||++||.|.+.++
T Consensus 411 ~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~fl~g~~l~~ 452 (454)
T KOG1282|consen 411 TKTYGGLTFATVRGAGHMVPYDKPESALIMFQRFLNGQPLPS 452 (454)
T ss_pred EEEecCEEEEEEeCCcccCCCCCcHHHHHHHHHHHcCCCCCC
Confidence 999999999999999999999999999999999999988765
No 2
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=7.1e-97 Score=762.05 Aligned_cols=391 Identities=35% Similarity=0.619 Sum_probs=306.1
Q ss_pred CCCCCceeeeeEeC--CCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCccc------CCCCCC
Q 012362 31 NQDASEEWGYVEVR--PKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY------LKPRNS 102 (465)
Q Consensus 31 ~~~~~~~sGyv~v~--~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~------l~~~~~ 102 (465)
++++++|||||+|+ .+++||||||||+ ++|++ +||||||||||||||| .|+|.|+|||+++ +..|++
T Consensus 6 ~~~~~~~sGyl~~~~~~~~~lfyw~~~s~---~~~~~-~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~~ 80 (415)
T PF00450_consen 6 PVPFKQYSGYLPVNDNENAHLFYWFFESR---NDPED-DPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNPY 80 (415)
T ss_dssp -SSSEEEEEEEEECTTTTEEEEEEEEE-S---SGGCS-S-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-TT
T ss_pred CCCceEEEEEEecCCCCCcEEEEEEEEeC---CCCCC-ccEEEEecCCceeccc-cccccccCceEEeeccccccccccc
Confidence 47799999999999 5689999999986 36755 4999999999999999 6999999999997 456999
Q ss_pred chhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHH
Q 012362 103 TWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKA 182 (465)
Q Consensus 103 sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~ 182 (465)
||++.+|||||||||||||||+.+.+.++.+++++|+|+++||++||.+||+|+++||||+||||||||||.+|.+|++.
T Consensus 81 sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~ 160 (415)
T PF00450_consen 81 SWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQ 160 (415)
T ss_dssp -GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHH
T ss_pred ccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhc
Confidence 99999999999999999999998776678899999999999999999999999999999999999999999999999998
Q ss_pred HHcC-cceeeeeeEEccCCCCCcccc-cccchhhhccCCCChhHHHHHHHHHHHHHHHHHcCCCcCchhHHHHHHHHHH-
Q 012362 183 IEAG-KLKLKLGGVALGDSWISPEDF-FSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESVIS- 259 (465)
Q Consensus 183 ~~~~-~~~inLkGi~IGNg~~~p~~~-~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~- 259 (465)
++.+ ..+||||||+|||||+||..| .++.++++.+|+|++.+++.+++.++.+ ..+......|......+.
T Consensus 161 ~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~------~~~~~~~~~c~~~~~~~~~ 234 (415)
T PF00450_consen 161 NKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEAC------PQCQKAITECAAALDELSC 234 (415)
T ss_dssp TCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTS------HSSSCCHHHHHHHHHHHHH
T ss_pred cccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhcc------ccccchhhHHHHHHHhhhh
Confidence 7543 468999999999999999998 8899999999999988776655433221 122223334444333322
Q ss_pred -----hhCCCCccccccccCCCCCcccccccccccccchhhhhhcccCCCCCCCCCchhhhhccH-HHHHHhccC-CCCc
Q 012362 260 -----QNSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNG-VIKKKLKII-PENI 332 (465)
Q Consensus 260 -----~~~~~~~~yn~~~~~~~~p~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~~~~v~~~lN~-~Vk~aL~i~-p~~~ 332 (465)
....++|+||++..|+..... .+... ...++...+.+..|||+ +||++||+. +...
T Consensus 235 ~~~~~~~~~~~n~Ydi~~~~~~~~~~----------------~~~~~-~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~~ 297 (415)
T PF00450_consen 235 QYAISQCNGGINPYDIRQPCYNPSRS----------------SYDNS-PSNDPPDDDYLEAYLNRPDVREALHVPVDSNV 297 (415)
T ss_dssp HCHHHHHHTTSETTSTTSEETT-SHC----------------TTCCC-CTTTTTCHHHHHHHHTSHHHHHHTT-STTTSS
T ss_pred hcccccccCCcceeeeeccccccccc----------------ccccc-ccccccchhhHHHHhccHHHHHhhCCCcccCC
Confidence 345799999999887531100 00000 00112233567889999 699999986 4567
Q ss_pred cccccChhH-hhhccCCCCcccHHHHHHHHhcCCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCC
Q 012362 333 TWGGQSDSV-FTELSGDFMRPRISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGND 411 (465)
Q Consensus 333 ~w~~cs~~V-~~~~~~D~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~ 411 (465)
+|..|+..| +..+..|.+.++.+.++.||++++|||||+||+|++||+.|+++|+++|+|+++++|+.++++ .+
T Consensus 298 ~w~~~~~~V~~~~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~-----~~ 372 (415)
T PF00450_consen 298 NWQSCNDAVNFNWLYDDFMPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRK-----VN 372 (415)
T ss_dssp S--SB-HHHHHHCCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEE-----TT
T ss_pred cccccCcccccccccccccccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCccccccccccc-----cc
Confidence 999999999 556677889999999999999999999999999999999999999999999999999877665 35
Q ss_pred ceeeEEEEEECCeEEEEEcCcccccCCcChHHHHHHHHHHhcC
Q 012362 412 KITKGFKKSYKNLHFYWILGAGHFVPVDQPCIALNMLAAMTDS 454 (465)
Q Consensus 412 ~~~~G~~k~~~nLtfv~V~~AGHmvP~DqP~~a~~mi~~fl~~ 454 (465)
++++||+|+++||||++|++||||||+|||+++++||++||+|
T Consensus 373 ~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 373 GQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp CSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHHHHHHCT
T ss_pred ccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHHHHHhcC
Confidence 6799999999999999999999999999999999999999986
No 3
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=2.5e-94 Score=744.47 Aligned_cols=394 Identities=25% Similarity=0.470 Sum_probs=337.5
Q ss_pred ccccccCCCCCCceeeeeEeCC---CceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccC---
Q 012362 24 AARALNKNQDASEEWGYVEVRP---KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYL--- 97 (465)
Q Consensus 24 ~~~~~~~~~~~~~~sGyv~v~~---~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l--- 97 (465)
+...++-.++++++||||+|++ +.+||||||||+ ++|++ +||||||||||||||| .|+|+|+|||+++.
T Consensus 35 ~~~~~~~~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~---~~~~~-~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~ 109 (462)
T PTZ00472 35 GSGWAPCDPSVNQWSGYFDIPGNQTDKHYFYWAFGPR---NGNPE-APVLLWMTGGPGCSSM-FALLAENGPCLMNETTG 109 (462)
T ss_pred CCCccccCCCCcceeEEEEeCCCCCCceEEEEEEEcC---CCCCC-CCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCC
Confidence 3444555567889999999964 579999999986 45755 5999999999999999 79999999999864
Q ss_pred --CCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHH
Q 012362 98 --KPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 175 (465)
Q Consensus 98 --~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~i 175 (465)
..|++||++.+||||||||+||||||+... .+..+++++|+|+++||+.||++||+++++||||+||||||+|+|.+
T Consensus 110 ~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~ 188 (462)
T PTZ00472 110 DIYNNTYSWNNEAYVIYVDQPAGVGFSYADKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPAT 188 (462)
T ss_pred ceeECCcccccccCeEEEeCCCCcCcccCCCC-CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHH
Confidence 469999999999999999999999998754 45778899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcC-cceeeeeeEEccCCCCCcccc-cccchhhhc-------cCCCChhHHHHHHHHHHHHHHHHHcCCCcC
Q 012362 176 GLAAVKAIEAG-KLKLKLGGVALGDSWISPEDF-FSWGPLLKD-------MSRLDTNGFAKSNQIAQKIKQQLEAGEFVG 246 (465)
Q Consensus 176 a~~i~~~~~~~-~~~inLkGi~IGNg~~~p~~~-~~~~~~~~~-------~~~id~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (465)
|.+|+++|+.+ ..+||||||+|||||+||..| .++.+|++. .++|++.+++.+++..+.|++.++.|+...
T Consensus 189 a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~ 268 (462)
T PTZ00472 189 AYRINMGNKKGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNP 268 (462)
T ss_pred HHHHHhhccccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccC
Confidence 99999987654 478999999999999999999 889999885 579999999999988888988887776421
Q ss_pred ---------chhHHHHHHHHHHhhCCCCccccccccCCCCCcccccccccccccchhhhhhcccCCCCCCCCCchhhhhc
Q 012362 247 ---------ATDSWAQLESVISQNSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLM 317 (465)
Q Consensus 247 ---------a~~~~~~~~~~~~~~~~~~~~yn~~~~~~~~p~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~~~~v~~~l 317 (465)
+...|..+...+. ..++|.||++..|.. +. ++ ....++.||
T Consensus 269 ~~~~~~c~~a~~~c~~~~~~~~--~~g~n~Ydi~~~c~~-~~--------------c~-------------~~~~~~~yL 318 (462)
T PTZ00472 269 DDADSSCSVARALCNEYIAVYS--ATGLNNYDIRKPCIG-PL--------------CY-------------NMDNTIAFM 318 (462)
T ss_pred CCcchHHHHHHHHHHHHHHHHH--hcCCChhheeccCCC-CC--------------cc-------------CHHHHHHHh
Confidence 1122333333222 457899999876521 10 00 013467788
Q ss_pred cH-HHHHHhccCCCCccccccChhHhhhccCCCCcccHHHHHHHHhcCCeEEEEecCCcccCCchhHHHHHHHcCccccc
Q 012362 318 NG-VIKKKLKIIPENITWGGQSDSVFTELSGDFMRPRISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQ 396 (465)
Q Consensus 318 N~-~Vk~aL~i~p~~~~w~~cs~~V~~~~~~D~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~ 396 (465)
|+ +||++||+. ..+|+.|+..|+..+..|++.++.+.|+.||++|+|||||+||.|++||+.|+++|+++|+|++++
T Consensus 319 N~~~Vq~AL~v~--~~~w~~c~~~V~~~~~~D~~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~ 396 (462)
T PTZ00472 319 NREDVQSSLGVK--PATWQSCNMEVNLMFEMDWMKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNA 396 (462)
T ss_pred CCHHHHHHhCCC--CCCceeCCHHHHHHhhhccccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCcc
Confidence 88 599999985 358999999999999899999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCeeeEeCCCceeeEEEEEEC-----CeEEEEEcCcccccCCcChHHHHHHHHHHhcCCC
Q 012362 397 KFLSTERTPLFCGNDKITKGFKKSYK-----NLHFYWILGAGHFVPVDQPCIALNMLAAMTDSPA 456 (465)
Q Consensus 397 ~f~~a~~~~w~~~~~~~~~G~~k~~~-----nLtfv~V~~AGHmvP~DqP~~a~~mi~~fl~~~~ 456 (465)
+|++++++||+. .+++++||+|+++ ||||++|++||||||+|||+++++||++|+.+++
T Consensus 397 ~f~~a~~~~w~~-~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d~P~~~~~~i~~fl~~~~ 460 (462)
T PTZ00472 397 EFNAAPDVPFSA-VDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMDQPAVALTMINRFLRNRP 460 (462)
T ss_pred chhhcCccccEe-cCCEeceEEEEEecccCCCeEEEEECCCCccChhhHHHHHHHHHHHHHcCCC
Confidence 999999999953 1347899999999 9999999999999999999999999999999875
No 4
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=8.7e-93 Score=724.22 Aligned_cols=380 Identities=21% Similarity=0.346 Sum_probs=308.1
Q ss_pred CCCCceeeeeEeCC--CceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCccc----------CCC
Q 012362 32 QDASEEWGYVEVRP--KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY----------LKP 99 (465)
Q Consensus 32 ~~~~~~sGyv~v~~--~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~----------l~~ 99 (465)
++++++|||++|++ +.++|||||||+ ++|++ +|+||||||||||||| .|+|+|+|||+++ +.+
T Consensus 33 ~~~~~~sGy~~v~~~~~~~lfy~f~es~---~~~~~-~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~~~~~~~~~~l~~ 107 (433)
T PLN03016 33 LPFELETGYIGIGEDENVQFFYYFIKSE---NNPKE-DPLLIWLNGGPGCSCL-GGIIFENGPVGLKFEVFNGSAPSLFS 107 (433)
T ss_pred CCeeEEEEEEEecCCCCeEEEEEEEecC---CCccc-CCEEEEEcCCCcHHHH-HHHHHhcCCceeeccccCCCCCceee
Confidence 34789999999975 478999999986 46755 4999999999999999 7999999999864 346
Q ss_pred CCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHH
Q 012362 100 RNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAA 179 (465)
Q Consensus 100 ~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i 179 (465)
|++||++.+||||||||+||||||+.+.... .++++.|+++++||++||++||+|+++||||+||||||||||.+|++|
T Consensus 108 n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i 186 (433)
T PLN03016 108 TTYSWTKMANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEI 186 (433)
T ss_pred CCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHH
Confidence 9999999999999999999999998765443 455667799999999999999999999999999999999999999999
Q ss_pred HHHHHc-CcceeeeeeEEccCCCCCcccc-cccchhhhccCCCChhHHHHHHHHHHHHHHHHHcCCCcCchhHHHHHHHH
Q 012362 180 VKAIEA-GKLKLKLGGVALGDSWISPEDF-FSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESV 257 (465)
Q Consensus 180 ~~~~~~-~~~~inLkGi~IGNg~~~p~~~-~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 257 (465)
++.|+. .+.+||||||+||||+++|..| .++.+|++.+|+|++++++.+++.++.+ .. ....+...|..+...
T Consensus 187 ~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~---~~--~~~~~~~~C~~~~~~ 261 (433)
T PLN03016 187 SQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGN---YY--NVDPSNTQCLKLTEE 261 (433)
T ss_pred HhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccc---cc--cCCCchHHHHHHHHH
Confidence 987754 3568999999999999999988 7899999999999998876665533211 11 112344567766666
Q ss_pred HHhhCCCCccccccccCCCCCcccccccccccccchhhhhhcccCCCCCCCC---CchhhhhccH-HHHHHhccCCC-Cc
Q 012362 258 ISQNSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDG---DGDVGSLMNG-VIKKKLKIIPE-NI 332 (465)
Q Consensus 258 ~~~~~~~~~~yn~~~~~~~~p~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~---~~~v~~~lN~-~Vk~aL~i~p~-~~ 332 (465)
+....+.+|.||++.++| ++...+ ...|. ...++.|||+ +||++||+.+. ..
T Consensus 262 ~~~~~~~~n~yni~~~~~-~~~~~~----------------------~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~ 318 (433)
T PLN03016 262 YHKCTAKINIHHILTPDC-DVTNVT----------------------SPDCYYYPYHLIECWANDESVREALHIEKGSKG 318 (433)
T ss_pred HHHHhcCCChhhccCCcc-cccccC----------------------CCcccccchHHHHHHhCCHHHHHHhCCCCCCCC
Confidence 666677889999986543 111110 00111 1246789998 59999998653 46
Q ss_pred cccccChhHhhhccCCCCcccHHHHHHHHhcCCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCc
Q 012362 333 TWGGQSDSVFTELSGDFMRPRISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDK 412 (465)
Q Consensus 333 ~w~~cs~~V~~~~~~D~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~ 412 (465)
+|..|+..|. +..|.+.+ .+.+..++.+++|||||+||.|++||+.|+++|+++|+|++.+. |+||+++ +
T Consensus 319 ~w~~cn~~v~--~~~d~~~~-~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~-----~~~w~~~--~ 388 (433)
T PLN03016 319 KWARCNRTIP--YNHDIVSS-IPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHN-----WRPWMIN--N 388 (433)
T ss_pred CCccCCcccc--cccccchh-hHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCC-----cccccCC--C
Confidence 8999999886 44566543 33334455668999999999999999999999999999999876 4689853 5
Q ss_pred eeeEEEEEECC-eEEEEEcCcccccCCcChHHHHHHHHHHhcCCC
Q 012362 413 ITKGFKKSYKN-LHFYWILGAGHFVPVDQPCIALNMLAAMTDSPA 456 (465)
Q Consensus 413 ~~~G~~k~~~n-Ltfv~V~~AGHmvP~DqP~~a~~mi~~fl~~~~ 456 (465)
+++||+|+|+| |||++|++|||||| |||++|++||++||+++.
T Consensus 389 ~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~~Fi~~~~ 432 (433)
T PLN03016 389 QIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQRWISGQP 432 (433)
T ss_pred EeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHHHHHcCCC
Confidence 79999999986 99999999999998 799999999999999874
No 5
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=5e-91 Score=711.16 Aligned_cols=383 Identities=21% Similarity=0.346 Sum_probs=300.1
Q ss_pred CCCCCceeeeeEeCC--CceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCccc----------CC
Q 012362 31 NQDASEEWGYVEVRP--KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY----------LK 98 (465)
Q Consensus 31 ~~~~~~~sGyv~v~~--~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~----------l~ 98 (465)
+.++++++||++|++ ++++|||||||+ ++|++ +|+||||||||||||| .|+|.|+|||+++ +.
T Consensus 34 ~~~~~~~sGy~~v~~~~~~~lf~~f~es~---~~~~~-~Pl~lWlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~~~~~l~ 108 (437)
T PLN02209 34 PLPFELETGYIGIGEEENVQFFYYFIKSD---KNPQE-DPLIIWLNGGPGCSCL-SGLFFENGPLALKNKVYNGSVPSLV 108 (437)
T ss_pred CCCeeEEEEEEEecCCCCeEEEEEEEecC---CCCCC-CCEEEEECCCCcHHHh-hhHHHhcCCceeccCCCCCCcccce
Confidence 345889999999975 468999999986 46755 4999999999999999 7999999999975 34
Q ss_pred CCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHH
Q 012362 99 PRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (465)
Q Consensus 99 ~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~ 178 (465)
+|++||++.+||||||||+||||||+.+.... .+++++|+|+++||+.||++||+|+++||||+||||||||||.+|++
T Consensus 109 ~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~ 187 (437)
T PLN02209 109 STTYSWTKTANIIFLDQPVGSGFSYSKTPIER-TSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHE 187 (437)
T ss_pred eCCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHH
Confidence 69999999999999999999999998765444 44556779999999999999999999999999999999999999999
Q ss_pred HHHHHHc-CcceeeeeeEEccCCCCCcccc-cccchhhhccCCCChhHHHHHHHHHHHHHHHHHcCCCcCchhHHHHHHH
Q 012362 179 AVKAIEA-GKLKLKLGGVALGDSWISPEDF-FSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLES 256 (465)
Q Consensus 179 i~~~~~~-~~~~inLkGi~IGNg~~~p~~~-~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 256 (465)
|++.++. ++.+||||||+|||||+||..| .++.+|++.+|+|++.+++.+++. |..+.. ........|..+..
T Consensus 188 i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~---c~~~~~--~~~~~~~~C~~~i~ 262 (437)
T PLN02209 188 ISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRI---CKGNYF--SVDPSNKKCLKLVE 262 (437)
T ss_pred HHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHh---cccccc--cCCCChHHHHHHHH
Confidence 9987643 3568999999999999999988 789999999999999887766553 221100 01122334554444
Q ss_pred HHHhhCCCCccccccccCCCCCcccccccccccccchhhhhhcccCCCCCCCC---CchhhhhccH-HHHHHhccCCCC-
Q 012362 257 VISQNSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDG---DGDVGSLMNG-VIKKKLKIIPEN- 331 (465)
Q Consensus 257 ~~~~~~~~~~~yn~~~~~~~~p~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~---~~~v~~~lN~-~Vk~aL~i~p~~- 331 (465)
........++.|+++...|..... +.+. .+|. ...+..|||+ +||++||+....
T Consensus 263 ~~~~~~~~~~~~~~~~~~c~~~~~-----------------~~~~----~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~ 321 (437)
T PLN02209 263 EYHKCTDNINSHHTLIANCDDSNT-----------------QHIS----PDCYYYPYHLVECWANNESVREALHVDKGSI 321 (437)
T ss_pred HHHHHhhcCCcccccccccccccc-----------------ccCC----CCcccccHHHHHHHhCCHHHHHHhCCCCCCC
Confidence 333444556666544332211000 0000 0121 1346789999 599999985322
Q ss_pred ccccccChhHhhhccCCCCcccHHHHHHHHhcCCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCC
Q 012362 332 ITWGGQSDSVFTELSGDFMRPRISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGND 411 (465)
Q Consensus 332 ~~w~~cs~~V~~~~~~D~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~ 411 (465)
..|..|+..+ .+..|.+.+....+ .+|++|+|||||+||+|++||+.|+++|+++|+|++.+.| +||+++
T Consensus 322 ~~w~~~~~~~--~~~~d~~~~~~~~~-~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~-----~~w~~~-- 391 (437)
T PLN02209 322 GEWIRDHRGI--PYKSDIRSSIPYHM-NNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDW-----RPWMIK-- 391 (437)
T ss_pred CCCccccchh--hcccchhhhHHHHH-HHHhcCceEEEEECCccccCCcHhHHHHHHhcCCccCCCe-----eeeEEC--
Confidence 3699998755 34567665444444 4455789999999999999999999999999999998765 699874
Q ss_pred ceeeEEEEEECC-eEEEEEcCcccccCCcChHHHHHHHHHHhcCCC
Q 012362 412 KITKGFKKSYKN-LHFYWILGAGHFVPVDQPCIALNMLAAMTDSPA 456 (465)
Q Consensus 412 ~~~~G~~k~~~n-Ltfv~V~~AGHmvP~DqP~~a~~mi~~fl~~~~ 456 (465)
++++||+|+|+| |||++|+||||||| |||++|++||++||.+++
T Consensus 392 ~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~~fi~~~~ 436 (437)
T PLN02209 392 GQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQRWISGQP 436 (437)
T ss_pred CEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHHHHHcCCC
Confidence 479999999996 99999999999998 799999999999999864
No 6
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-84 Score=604.83 Aligned_cols=412 Identities=52% Similarity=0.921 Sum_probs=372.3
Q ss_pred CCceeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceee
Q 012362 34 ASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFV 113 (465)
Q Consensus 34 ~~~~sGyv~v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyi 113 (465)
+++-|||++|+.++|+|||.|.+.... +..+|+.|||+||||.||.++|+|+|+||...++.+|+.+|.+.|+|+||
T Consensus 1 ~d~~wg~v~vr~~a~~F~wly~~~~~~---ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfv 77 (414)
T KOG1283|consen 1 GDEDWGYVDVRTGAHMFWWLYYATANV---KSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFV 77 (414)
T ss_pred CCccccceeeecCceEEEEEeeecccc---ccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEe
Confidence 356799999999999999999986432 23469999999999999999999999999999999999999999999999
Q ss_pred cCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeee
Q 012362 114 DNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLG 193 (465)
Q Consensus 114 DqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLk 193 (465)
|.|||+||||.+..+.++++.+++|.|+.+.|+.||..||||+.+||||+-|||||+.++.+|..+.+.++.|+++.|+.
T Consensus 78 DnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~ 157 (414)
T KOG1283|consen 78 DNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFI 157 (414)
T ss_pred cCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecce
Confidence 99999999999988899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEccCCCCCcccc-cccchhhhccCCCChhHHHHHHHHHHHHHHHHHcCCCcCchhHHHHHHHHHHhhCCCCccccccc
Q 012362 194 GVALGDSWISPEDF-FSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESVISQNSNAVDFYNFLL 272 (465)
Q Consensus 194 Gi~IGNg~~~p~~~-~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~yn~~~ 272 (465)
|+++|+.||+|.+. .+|.||+++++++|+++.+.+++.++.|+..++.+.+..|...|...+..+..++..++.||++.
T Consensus 158 ~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~VdfYNil~ 237 (414)
T KOG1283|consen 158 GVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVDFYNILT 237 (414)
T ss_pred eEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCcceeeeec
Confidence 99999999999999 99999999999999999999999999999999999999999999888888989999999999999
Q ss_pred cCCCCCcccccccccccccchhhhhhcccCCCCCCCCCchhhhhccHHHHHHhccCCCCccccccChhHhhhccCCCCcc
Q 012362 273 DSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNGVIKKKLKIIPENITWGGQSDSVFTELSGDFMRP 352 (465)
Q Consensus 273 ~~~~~p~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~~~~v~~~lN~~Vk~aL~i~p~~~~w~~cs~~V~~~~~~D~~~~ 352 (465)
+...|++..+..... ....+..+|+... ..+...+.++++||.+||++|+|+|..+.|...+..|+..+.+|+|+|
T Consensus 238 ~t~~d~~~~ss~~~~---~~~~~~rrl~~~~-~~~~~~D~L~~lM~g~vrkkLgIip~~~~wGgqsg~vFt~lq~dFMKP 313 (414)
T KOG1283|consen 238 KTLGDQYSLSSRAAM---TPEEVMRRLLVRF-VGDEDRDKLSDLMNGPVRKKLGIIPGGVKWGGQSGDVFTKLQGDFMKP 313 (414)
T ss_pred cCCCcchhhhhhhhc---chHHHHHHHHhcc-CcchhHHHHHHHhcccccccccccCCCCcccCcCCchHHHhhhhhccc
Confidence 998888765443221 1122333332210 111223568899999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhcCCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCc
Q 012362 353 RISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGA 432 (465)
Q Consensus 353 ~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~A 432 (465)
+...+.+||++|++|.||+|++|.||++.|+++|+.+|.|++.+.|+..+|.-.++ +...+||.|+|+||.|..|..|
T Consensus 314 vi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~--s~~l~gy~ktyknl~f~wilra 391 (414)
T KOG1283|consen 314 VISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITV--SRVLEGYEKTYKNLSFFWILRA 391 (414)
T ss_pred HHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccc--eeecchhhhhhccceeEEeecc
Confidence 99999999999999999999999999999999999999999999999998877765 4568999999999999999999
Q ss_pred ccccCCcChHHHHHHHHHHhcC
Q 012362 433 GHFVPVDQPCIALNMLAAMTDS 454 (465)
Q Consensus 433 GHmvP~DqP~~a~~mi~~fl~~ 454 (465)
|||||.|+|+.+.+|++.+.+.
T Consensus 392 ghmvp~Dnp~~a~hmlr~vtkq 413 (414)
T KOG1283|consen 392 GHMVPADNPAAASHMLRHVTKQ 413 (414)
T ss_pred cCcccCCCHHHHhhheeecccc
Confidence 9999999999999999887653
No 7
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=1.7e-70 Score=543.81 Aligned_cols=310 Identities=17% Similarity=0.269 Sum_probs=245.8
Q ss_pred cccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHc-
Q 012362 107 KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA- 185 (465)
Q Consensus 107 ~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~- 185 (465)
.|||||||||+||||||++++... .+++++|+|++.||+.||++||+|+++||||+||||||||||.+|++|++.|+.
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~-~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~ 79 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 79 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc-cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccc
Confidence 489999999999999998765443 455666799999999999999999999999999999999999999999987653
Q ss_pred CcceeeeeeEEccCCCCCcccc-cccchhhhccCCCChhHHHHHHHHHHHHHHHHHcCCCcCchhHHHHHHHHHHhhCCC
Q 012362 186 GKLKLKLGGVALGDSWISPEDF-FSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESVISQNSNA 264 (465)
Q Consensus 186 ~~~~inLkGi~IGNg~~~p~~~-~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 264 (465)
++.+||||||+|||||++|..+ .++.+|++.+|+|++.+++.+++.+..+ .. ....+...|.++...+....+.
T Consensus 80 ~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~---~~--~~~~~~~~c~~~~~~~~~~~~~ 154 (319)
T PLN02213 80 CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGN---YY--NVDPSNTQCLKLTEEYHKCTAK 154 (319)
T ss_pred cCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCC---cc--CCCCCcHHHHHHHHHHHHHHhc
Confidence 3568999999999999999988 8899999999999998877665432111 00 1122345576666655556678
Q ss_pred CccccccccCCCCCcccccccccccccchhhhhhcccCCCCCCCC---CchhhhhccH-HHHHHhccCCC-CccccccCh
Q 012362 265 VDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDG---DGDVGSLMNG-VIKKKLKIIPE-NITWGGQSD 339 (465)
Q Consensus 265 ~~~yn~~~~~~~~p~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~---~~~v~~~lN~-~Vk~aL~i~p~-~~~w~~cs~ 339 (465)
++.||++.++|. +...+ ...|. ...+..|||+ +||++||+.+. ..+|+.||.
T Consensus 155 ~~~~~~~~~~~~-~~~~~----------------------~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~c~~ 211 (319)
T PLN02213 155 INIHHILTPDCD-VTNVT----------------------SPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNR 211 (319)
T ss_pred CCHhhcccCccc-CccCC----------------------CCCcccchhHHHHHHhCCHHHHHHhCcCCCCCCCCccCCc
Confidence 899998855431 11100 00111 1357889998 59999998653 468999999
Q ss_pred hHhhhccCCCCcccHHHHHHHHhcCCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEE
Q 012362 340 SVFTELSGDFMRPRISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKK 419 (465)
Q Consensus 340 ~V~~~~~~D~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k 419 (465)
.|. +..|.+.+....+ .+|..|+|||||+||.|++||+.|+++|+++|+|++.++ |+||+++ ++++||+|
T Consensus 212 ~v~--~~~d~~~~~~~~~-~~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~-----~~~w~~~--~~~~G~vk 281 (319)
T PLN02213 212 TIP--YNHDIVSSIPYHM-NNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHN-----WRPWMIN--NQIAGYTR 281 (319)
T ss_pred ccc--cccccccchHHHH-HHHhcCceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCC-----CccccCC--CEeeeEEE
Confidence 887 5567654333333 455568999999999999999999999999999999876 4689863 57899999
Q ss_pred EECC-eEEEEEcCcccccCCcChHHHHHHHHHHhcCCC
Q 012362 420 SYKN-LHFYWILGAGHFVPVDQPCIALNMLAAMTDSPA 456 (465)
Q Consensus 420 ~~~n-Ltfv~V~~AGHmvP~DqP~~a~~mi~~fl~~~~ 456 (465)
+|++ |||++|+||||||| |||+++++||++||++..
T Consensus 282 ~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~~fi~~~~ 318 (319)
T PLN02213 282 AYSNKMTFATIKAGGHTAE-YRPNETFIMFQRWISGQP 318 (319)
T ss_pred EecCcceEEEEcCCCCCCC-cCHHHHHHHHHHHHcCCC
Confidence 9986 99999999999998 799999999999999864
No 8
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-68 Score=533.55 Aligned_cols=389 Identities=25% Similarity=0.443 Sum_probs=297.6
Q ss_pred CCceeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCC----C--CCCchhcc
Q 012362 34 ASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLK----P--RNSTWLKK 107 (465)
Q Consensus 34 ~~~~sGyv~v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~----~--~~~sw~~~ 107 (465)
.++++||.++. ..+|||+||++ ++|.+ +|+||||||||||||+ .|+|.|+||.+|+.. + ||+||+++
T Consensus 74 v~~~~g~~d~e--d~~ffy~fe~~---ndp~~-rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~~P~~~~NP~SW~~~ 146 (498)
T COG2939 74 VRDYTGYPDAE--DFFFFYTFESP---NDPAN-RPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGTSPSYPDNPGSWLDF 146 (498)
T ss_pred hhhccCCcccc--eeEEEEEecCC---CCCCC-CceEEEecCCCChHhh-hhhhhhcCCeeeeCCCCCCCCCCccccccC
Confidence 34566764443 34999999984 46755 5999999999999999 799999999998643 3 99999999
Q ss_pred ccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCC--CEEEEecccccchHHHHHHHHHHHHHc
Q 012362 108 ADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKS--PLFIVAESYGGKFAATLGLAAVKAIEA 185 (465)
Q Consensus 108 ~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~--~~~I~GESYgG~YvP~ia~~i~~~~~~ 185 (465)
+||||||||+|||||++. ++....+...+.+|++.|++.||+.||+|.+. |+||+||||||+|+|.||++|++++..
T Consensus 147 adLvFiDqPvGTGfS~a~-~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~ 225 (498)
T COG2939 147 ADLVFIDQPVGTGFSRAL-GDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIA 225 (498)
T ss_pred CceEEEecCcccCccccc-ccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccc
Confidence 999999999999999983 33467889999999999999999999999887 999999999999999999999997654
Q ss_pred CcceeeeeeEEccCC-CCCcccc-cccchhhhccCCCChh-HHHHHHHHHHHHH-----HHHHcCCCcCchhHHHHHHHH
Q 012362 186 GKLKLKLGGVALGDS-WISPEDF-FSWGPLLKDMSRLDTN-GFAKSNQIAQKIK-----QQLEAGEFVGATDSWAQLESV 257 (465)
Q Consensus 186 ~~~~inLkGi~IGNg-~~~p~~~-~~~~~~~~~~~~id~~-~~~~~~~~~~~~~-----~~~~~~~~~~a~~~~~~~~~~ 257 (465)
.+-.+||++++|||| +++|..| ..|.+++...+..+.. .-++|+++.+.|+ ..++.+.-......|......
T Consensus 226 ~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~~ 305 (498)
T COG2939 226 LNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASAY 305 (498)
T ss_pred cCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHHH
Confidence 455789999999999 9999988 8888888754433211 1134444433332 222222111122233322222
Q ss_pred HHh-------hCC--CCccccccccCCCCCcccccccccccccchhhhhhcccCCCCCCCCCchhhhhccH-HHHHHhcc
Q 012362 258 ISQ-------NSN--AVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNG-VIKKKLKI 327 (465)
Q Consensus 258 ~~~-------~~~--~~~~yn~~~~~~~~p~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~~~~v~~~lN~-~Vk~aL~i 327 (465)
+.. ..+ +.|+|+++..|. +|.. .+.+|..+ ..+..++|- ++++.+.
T Consensus 306 ~~~~~~~~~~r~~~~~~n~y~~r~~~~-d~g~----------~~~~y~~~------------~~~ld~~~~~~~~~~~~- 361 (498)
T COG2939 306 LTGLMREYVGRAGGRLLNVYDIREECR-DPGL----------GGSCYDTL------------STSLDYFNFDPEQEVND- 361 (498)
T ss_pred HHhcchhhhccccccccccccchhhcC-CCCc----------ccccccce------------eeccccccccchhcccc-
Confidence 111 111 478888876652 2211 11222111 123344442 4555443
Q ss_pred CCCCccccccChhHhhhc---cCCCCcccHHHHHHHHhcCCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCe
Q 012362 328 IPENITWGGQSDSVFTEL---SGDFMRPRISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERT 404 (465)
Q Consensus 328 ~p~~~~w~~cs~~V~~~~---~~D~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~ 404 (465)
|.-..|..|+..+...| .++++.+....+..++.+|+.+++|.||.|.+||+.|+++|..+|+|.+..+|..+.-.
T Consensus 362 -~~~d~~~~c~t~a~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~~~ 440 (498)
T COG2939 362 -PEVDNISGCTTDAMTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDASTP 440 (498)
T ss_pred -ccccchhccchHHHHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhhcCC
Confidence 33346999999998776 58999999999999999999999999999999999999999999999999999999888
Q ss_pred eeEeCCCceeeEEEEEECCeEEEEEcCcccccCCcChHHHHHHHHHHhcCC
Q 012362 405 PLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVDQPCIALNMLAAMTDSP 455 (465)
Q Consensus 405 ~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~DqP~~a~~mi~~fl~~~ 455 (465)
+|......+..|-+++++|++|++++.||||||.|+|+.+++|++.|+.+.
T Consensus 441 ~~~~~~t~e~~~~~~s~~n~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~~ 491 (498)
T COG2939 441 FFWSRLTLEEMGGYKSYRNLTFLRIYEAGHMVPYDRPESSLEMVNLWINGY 491 (498)
T ss_pred CcccccchhhcccccccCCceEEEEecCcceeecCChHHHHHHHHHHHhhc
Confidence 887644556788888999999999999999999999999999999999883
No 9
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.32 E-value=4e-11 Score=113.86 Aligned_cols=105 Identities=22% Similarity=0.251 Sum_probs=74.6
Q ss_pred CCEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHH
Q 012362 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (465)
Q Consensus 67 ~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~ 146 (465)
.|+||+++|.+|.+.++ ..+. .-+.+..+++.+|.| |.|.|-.... ...+.++.++++.++++
T Consensus 13 ~~~iv~lhG~~~~~~~~-~~~~-------------~~l~~~~~vi~~D~~-G~G~S~~~~~--~~~~~~~~~~~~~~~i~ 75 (257)
T TIGR03611 13 APVVVLSSGLGGSGSYW-APQL-------------DVLTQRFHVVTYDHR-GTGRSPGELP--PGYSIAHMADDVLQLLD 75 (257)
T ss_pred CCEEEEEcCCCcchhHH-HHHH-------------HHHHhccEEEEEcCC-CCCCCCCCCc--ccCCHHHHHHHHHHHHH
Confidence 49999999998877653 2111 123456899999999 9999964322 23466777888777776
Q ss_pred HHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCc
Q 012362 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (465)
Q Consensus 147 ~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p 204 (465)
.. ...+++|+|+|+||..+..+|.+..+ .++++++.+|+..+
T Consensus 76 ~~-------~~~~~~l~G~S~Gg~~a~~~a~~~~~---------~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 76 AL-------NIERFHFVGHALGGLIGLQLALRYPE---------RLLSLVLINAWSRP 117 (257)
T ss_pred Hh-------CCCcEEEEEechhHHHHHHHHHHChH---------HhHHheeecCCCCC
Confidence 42 24679999999999999998865432 47888887776543
No 10
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.28 E-value=2.6e-10 Score=109.95 Aligned_cols=128 Identities=23% Similarity=0.288 Sum_probs=82.2
Q ss_pred eeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchhc--cccceeec
Q 012362 37 EWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK--KADLLFVD 114 (465)
Q Consensus 37 ~sGyv~v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~--~~n~lyiD 114 (465)
..+++++++. .+.|..+.. +.+ .|.||+++||||+++.....+. ...+ ..+++.+|
T Consensus 3 ~~~~~~~~~~-~~~~~~~~~------~~~-~~~vl~~hG~~g~~~~~~~~~~--------------~~l~~~g~~vi~~d 60 (288)
T TIGR01250 3 IEGIITVDGG-YHLFTKTGG------EGE-KIKLLLLHGGPGMSHEYLENLR--------------ELLKEEGREVIMYD 60 (288)
T ss_pred ccceecCCCC-eEEEEeccC------CCC-CCeEEEEcCCCCccHHHHHHHH--------------HHHHhcCCEEEEEc
Confidence 3467777643 444433321 212 3788999999999865221111 1222 48999999
Q ss_pred CCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeee
Q 012362 115 NPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGG 194 (465)
Q Consensus 115 qPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkG 194 (465)
.| |.|.|..........+.++.++++..+++. +..++++|.|+|+||..+..+|..- +-.+++
T Consensus 61 ~~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~~---------p~~v~~ 123 (288)
T TIGR01250 61 QL-GCGYSDQPDDSDELWTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYALKY---------GQHLKG 123 (288)
T ss_pred CC-CCCCCCCCCcccccccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHhC---------ccccce
Confidence 99 999986432211124667777777665553 2245699999999999998887642 226889
Q ss_pred EEccCCCCC
Q 012362 195 VALGDSWIS 203 (465)
Q Consensus 195 i~IGNg~~~ 203 (465)
+++.++...
T Consensus 124 lvl~~~~~~ 132 (288)
T TIGR01250 124 LIISSMLDS 132 (288)
T ss_pred eeEeccccc
Confidence 998877553
No 11
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.21 E-value=1.8e-09 Score=105.99 Aligned_cols=124 Identities=15% Similarity=0.139 Sum_probs=86.0
Q ss_pred eeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCC
Q 012362 38 WGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPV 117 (465)
Q Consensus 38 sGyv~v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPv 117 (465)
+=|+++++. +++|.-. .++ .|.||+|||.++.+.++ ..+. -.+.+.++++.+|.|
T Consensus 10 ~~~~~~~~~-~i~y~~~------G~~---~~~vlllHG~~~~~~~w-~~~~-------------~~L~~~~~vi~~Dlp- 64 (294)
T PLN02824 10 TRTWRWKGY-NIRYQRA------GTS---GPALVLVHGFGGNADHW-RKNT-------------PVLAKSHRVYAIDLL- 64 (294)
T ss_pred CceEEEcCe-EEEEEEc------CCC---CCeEEEECCCCCChhHH-HHHH-------------HHHHhCCeEEEEcCC-
Confidence 347777643 5554321 122 27899999999988874 2221 235566799999999
Q ss_pred ccccccccCCC----CcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeee
Q 012362 118 GTGYSYVEDNS----SFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLG 193 (465)
Q Consensus 118 GvGfSy~~~~~----~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLk 193 (465)
|.|.|...+.. ....+.++.|+++.++|+.. ...+++|.|+|.||..+-.+|.+-.+ .++
T Consensus 65 G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~---------~v~ 128 (294)
T PLN02824 65 GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPE---------LVR 128 (294)
T ss_pred CCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChh---------hee
Confidence 99999643221 12356778888888888754 24789999999999999888865433 589
Q ss_pred eEEccCCCC
Q 012362 194 GVALGDSWI 202 (465)
Q Consensus 194 Gi~IGNg~~ 202 (465)
++++-|+..
T Consensus 129 ~lili~~~~ 137 (294)
T PLN02824 129 GVMLINISL 137 (294)
T ss_pred EEEEECCCc
Confidence 999988754
No 12
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.16 E-value=6.5e-10 Score=106.33 Aligned_cols=99 Identities=24% Similarity=0.241 Sum_probs=73.7
Q ss_pred CCEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHH
Q 012362 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (465)
Q Consensus 67 ~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~ 146 (465)
.|.||+++|.+|.+.+ ..-+. ..+.+..+++.+|.| |.|.|.... ..+.++.++|+..++.
T Consensus 16 ~~~iv~lhG~~~~~~~-~~~~~-------------~~l~~~~~vi~~D~~-G~G~s~~~~----~~~~~~~~~d~~~~l~ 76 (255)
T PRK10673 16 NSPIVLVHGLFGSLDN-LGVLA-------------RDLVNDHDIIQVDMR-NHGLSPRDP----VMNYPAMAQDLLDTLD 76 (255)
T ss_pred CCCEEEECCCCCchhH-HHHHH-------------HHHhhCCeEEEECCC-CCCCCCCCC----CCCHHHHHHHHHHHHH
Confidence 4999999999988866 33221 124456899999999 999886421 2467788999998887
Q ss_pred HHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCC
Q 012362 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (465)
Q Consensus 147 ~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg 200 (465)
.+ ...+++|.|+|.||..+..+|.+..+ .++++++.++
T Consensus 77 ~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~---------~v~~lvli~~ 114 (255)
T PRK10673 77 AL-------QIEKATFIGHSMGGKAVMALTALAPD---------RIDKLVAIDI 114 (255)
T ss_pred Hc-------CCCceEEEEECHHHHHHHHHHHhCHh---------hcceEEEEec
Confidence 53 23579999999999999988865433 5788888653
No 13
>PHA02857 monoglyceride lipase; Provisional
Probab=99.16 E-value=2.2e-09 Score=104.31 Aligned_cols=125 Identities=13% Similarity=0.160 Sum_probs=82.9
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchhc-cccceeecCCCccccc
Q 012362 44 RPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYS 122 (465)
Q Consensus 44 ~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~-~~n~lyiDqPvGvGfS 122 (465)
.++..|++..|+.. .++ +|+||.+||.+++|.+ +-.+ -..+.+ -.+++-+|.| |.|.|
T Consensus 8 ~~g~~l~~~~~~~~---~~~---~~~v~llHG~~~~~~~-~~~~-------------~~~l~~~g~~via~D~~-G~G~S 66 (276)
T PHA02857 8 LDNDYIYCKYWKPI---TYP---KALVFISHGAGEHSGR-YEEL-------------AENISSLGILVFSHDHI-GHGRS 66 (276)
T ss_pred CCCCEEEEEeccCC---CCC---CEEEEEeCCCccccch-HHHH-------------HHHHHhCCCEEEEccCC-CCCCC
Confidence 34568999888752 122 4899999999777665 3111 123544 3789999999 99998
Q ss_pred cccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCC
Q 012362 123 YVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (465)
Q Consensus 123 y~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~ 202 (465)
-... ....+-....+|+..++..+-+.++ ..+++|+|+|.||.-+..+|.+- +-+++|+++.+|.+
T Consensus 67 ~~~~--~~~~~~~~~~~d~~~~l~~~~~~~~---~~~~~lvG~S~GG~ia~~~a~~~---------p~~i~~lil~~p~~ 132 (276)
T PHA02857 67 NGEK--MMIDDFGVYVRDVVQHVVTIKSTYP---GVPVFLLGHSMGATISILAAYKN---------PNLFTAMILMSPLV 132 (276)
T ss_pred CCcc--CCcCCHHHHHHHHHHHHHHHHhhCC---CCCEEEEEcCchHHHHHHHHHhC---------ccccceEEEecccc
Confidence 5432 1123444556777777765544443 57899999999998777666432 11589999988765
Q ss_pred C
Q 012362 203 S 203 (465)
Q Consensus 203 ~ 203 (465)
.
T Consensus 133 ~ 133 (276)
T PHA02857 133 N 133 (276)
T ss_pred c
Confidence 4
No 14
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.11 E-value=8.2e-09 Score=101.86 Aligned_cols=132 Identities=15% Similarity=0.123 Sum_probs=85.5
Q ss_pred CCCCCCceeeeeEeCCC----ceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchh
Q 012362 30 KNQDASEEWGYVEVRPK----AHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL 105 (465)
Q Consensus 30 ~~~~~~~~sGyv~v~~~----~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~ 105 (465)
.+++++..-.|+.+++. .+++|.-. .++ + .|.||.+||.|+.+..+ ..+. -...
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~i~y~~~------G~~-~-~~~lvliHG~~~~~~~w-~~~~-------------~~L~ 70 (302)
T PRK00870 13 NLPDYPFAPHYVDVDDGDGGPLRMHYVDE------GPA-D-GPPVLLLHGEPSWSYLY-RKMI-------------PILA 70 (302)
T ss_pred CCcCCCCCceeEeecCCCCceEEEEEEec------CCC-C-CCEEEEECCCCCchhhH-HHHH-------------HHHH
Confidence 35556665679999762 35665532 234 2 37899999998777663 2111 0122
Q ss_pred c-cccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHH
Q 012362 106 K-KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIE 184 (465)
Q Consensus 106 ~-~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~ 184 (465)
+ ..+++.+|.| |.|.|-.... ....+.++.++++.++|+. +...+++|.|+|+||..+-.+|.+-.+
T Consensus 71 ~~gy~vi~~Dl~-G~G~S~~~~~-~~~~~~~~~a~~l~~~l~~-------l~~~~v~lvGhS~Gg~ia~~~a~~~p~--- 138 (302)
T PRK00870 71 AAGHRVIAPDLI-GFGRSDKPTR-REDYTYARHVEWMRSWFEQ-------LDLTDVTLVCQDWGGLIGLRLAAEHPD--- 138 (302)
T ss_pred hCCCEEEEECCC-CCCCCCCCCC-cccCCHHHHHHHHHHHHHH-------cCCCCEEEEEEChHHHHHHHHHHhChh---
Confidence 2 4899999999 9999842211 1123566777777666653 234689999999999998888865322
Q ss_pred cCcceeeeeeEEccCCC
Q 012362 185 AGKLKLKLGGVALGDSW 201 (465)
Q Consensus 185 ~~~~~inLkGi~IGNg~ 201 (465)
.++++++-++.
T Consensus 139 ------~v~~lvl~~~~ 149 (302)
T PRK00870 139 ------RFARLVVANTG 149 (302)
T ss_pred ------heeEEEEeCCC
Confidence 58888886653
No 15
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.10 E-value=2e-09 Score=104.02 Aligned_cols=105 Identities=21% Similarity=0.228 Sum_probs=73.2
Q ss_pred CCEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHH
Q 012362 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (465)
Q Consensus 67 ~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~ 146 (465)
.|.||+++|.+|.+.. +..+. ....+..+++.+|.| |.|.|..... ...+.+..++++.++++
T Consensus 28 ~~~vv~~hG~~~~~~~-~~~~~-------------~~l~~~~~vi~~D~~-G~G~S~~~~~--~~~~~~~~~~~l~~~i~ 90 (278)
T TIGR03056 28 GPLLLLLHGTGASTHS-WRDLM-------------PPLARSFRVVAPDLP-GHGFTRAPFR--FRFTLPSMAEDLSALCA 90 (278)
T ss_pred CCeEEEEcCCCCCHHH-HHHHH-------------HHHhhCcEEEeecCC-CCCCCCCccc--cCCCHHHHHHHHHHHHH
Confidence 3899999999877765 32111 112345799999999 9998864322 13467778888877776
Q ss_pred HHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCc
Q 012362 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (465)
Q Consensus 147 ~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p 204 (465)
. +..++++|+|+|+||..+..+|.+. +-.++++++.++..++
T Consensus 91 ~-------~~~~~~~lvG~S~Gg~~a~~~a~~~---------p~~v~~~v~~~~~~~~ 132 (278)
T TIGR03056 91 A-------EGLSPDGVIGHSAGAAIALRLALDG---------PVTPRMVVGINAALMP 132 (278)
T ss_pred H-------cCCCCceEEEECccHHHHHHHHHhC---------CcccceEEEEcCcccc
Confidence 3 2246899999999999888776542 1257899998886654
No 16
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.07 E-value=3.7e-08 Score=98.53 Aligned_cols=135 Identities=19% Similarity=0.208 Sum_probs=88.7
Q ss_pred eeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCC--Cchhc-cccceee
Q 012362 37 EWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRN--STWLK-KADLLFV 113 (465)
Q Consensus 37 ~sGyv~v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~--~sw~~-~~n~lyi 113 (465)
..+++...++..++|+.+.... ..+ .+|+||++||..+.++ +. + .. ..+.+ -.+|+.+
T Consensus 33 ~~~~~~~~dg~~l~~~~~~~~~--~~~--~~~~VvllHG~~~~~~-~~--~------------~~~~~~L~~~Gy~V~~~ 93 (330)
T PLN02298 33 SKSFFTSPRGLSLFTRSWLPSS--SSP--PRALIFMVHGYGNDIS-WT--F------------QSTAIFLAQMGFACFAL 93 (330)
T ss_pred ccceEEcCCCCEEEEEEEecCC--CCC--CceEEEEEcCCCCCcc-ee--h------------hHHHHHHHhCCCEEEEe
Confidence 4678877667788887665311 112 2489999999854332 11 0 11 12444 4899999
Q ss_pred cCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeee
Q 012362 114 DNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLG 193 (465)
Q Consensus 114 DqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLk 193 (465)
|+| |.|.|-... ....+.+..++|+..+++..-. ...+.+.+++|+|+|.||..+..++..- +-.++
T Consensus 94 D~r-GhG~S~~~~--~~~~~~~~~~~D~~~~i~~l~~-~~~~~~~~i~l~GhSmGG~ia~~~a~~~---------p~~v~ 160 (330)
T PLN02298 94 DLE-GHGRSEGLR--AYVPNVDLVVEDCLSFFNSVKQ-REEFQGLPRFLYGESMGGAICLLIHLAN---------PEGFD 160 (330)
T ss_pred cCC-CCCCCCCcc--ccCCCHHHHHHHHHHHHHHHHh-cccCCCCCEEEEEecchhHHHHHHHhcC---------cccce
Confidence 999 999985321 2234667888999888875543 2233356899999999999777665321 11589
Q ss_pred eEEccCCCCC
Q 012362 194 GVALGDSWIS 203 (465)
Q Consensus 194 Gi~IGNg~~~ 203 (465)
|+++.+++..
T Consensus 161 ~lvl~~~~~~ 170 (330)
T PLN02298 161 GAVLVAPMCK 170 (330)
T ss_pred eEEEeccccc
Confidence 9999887654
No 17
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.07 E-value=2.9e-09 Score=104.44 Aligned_cols=123 Identities=18% Similarity=0.245 Sum_probs=76.0
Q ss_pred ceeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecC
Q 012362 36 EEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDN 115 (465)
Q Consensus 36 ~~sGyv~v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDq 115 (465)
..+.++++++. .++|- + . . + .|.||.|||.|..+.+ .-.+ -..+.+..+++-+|.
T Consensus 14 ~~~~~~~~~~~-~i~y~--~-~---G---~-~~~iv~lHG~~~~~~~-~~~~-------------~~~l~~~~~vi~~D~ 68 (286)
T PRK03204 14 FESRWFDSSRG-RIHYI--D-E---G---T-GPPILLCHGNPTWSFL-YRDI-------------IVALRDRFRCVAPDY 68 (286)
T ss_pred ccceEEEcCCc-EEEEE--E-C---C---C-CCEEEEECCCCccHHH-HHHH-------------HHHHhCCcEEEEECC
Confidence 44578888643 55432 2 1 1 1 2778889999854443 2111 012445689999999
Q ss_pred CCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeE
Q 012362 116 PVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGV 195 (465)
Q Consensus 116 PvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi 195 (465)
| |.|.|-... ....+.++.++++..+++.+ ...+++|+|+|+||.-+-.+|..-. -.++++
T Consensus 69 ~-G~G~S~~~~--~~~~~~~~~~~~~~~~~~~~-------~~~~~~lvG~S~Gg~va~~~a~~~p---------~~v~~l 129 (286)
T PRK03204 69 L-GFGLSERPS--GFGYQIDEHARVIGEFVDHL-------GLDRYLSMGQDWGGPISMAVAVERA---------DRVRGV 129 (286)
T ss_pred C-CCCCCCCCC--ccccCHHHHHHHHHHHHHHh-------CCCCEEEEEECccHHHHHHHHHhCh---------hheeEE
Confidence 9 999884321 12234556666666555432 2367999999999986655554321 268999
Q ss_pred EccCCCC
Q 012362 196 ALGDSWI 202 (465)
Q Consensus 196 ~IGNg~~ 202 (465)
++.++..
T Consensus 130 vl~~~~~ 136 (286)
T PRK03204 130 VLGNTWF 136 (286)
T ss_pred EEECccc
Confidence 9887653
No 18
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.02 E-value=1.3e-08 Score=102.64 Aligned_cols=127 Identities=15% Similarity=0.192 Sum_probs=82.6
Q ss_pred CCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchhc-cccceeecCCCcccccc
Q 012362 45 PKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYSY 123 (465)
Q Consensus 45 ~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~-~~n~lyiDqPvGvGfSy 123 (465)
.+..+|+..+... +. +.+|+||++||..+.++...-.+ -..+.+ -.+++-+|.| |.|.|-
T Consensus 70 ~g~~l~~~~~~p~---~~--~~~~~iv~lHG~~~~~~~~~~~~-------------~~~l~~~g~~v~~~D~~-G~G~S~ 130 (349)
T PLN02385 70 RGVEIFSKSWLPE---NS--RPKAAVCFCHGYGDTCTFFFEGI-------------ARKIASSGYGVFAMDYP-GFGLSE 130 (349)
T ss_pred CCCEEEEEEEecC---CC--CCCeEEEEECCCCCccchHHHHH-------------HHHHHhCCCEEEEecCC-CCCCCC
Confidence 3457887776532 11 12489999999766554311000 013444 4899999999 999985
Q ss_pred ccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCC
Q 012362 124 VEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (465)
Q Consensus 124 ~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~ 202 (465)
... .+..+-++.++|+.++++.. ...+++...+++|+|+|+||..+..++.+-. -.++|+++-++..
T Consensus 131 ~~~--~~~~~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG~val~~a~~~p---------~~v~glVLi~p~~ 197 (349)
T PLN02385 131 GLH--GYIPSFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGGAVALKVHLKQP---------NAWDGAILVAPMC 197 (349)
T ss_pred CCC--CCcCCHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccchHHHHHHHHhCc---------chhhheeEecccc
Confidence 422 22346677888888887653 3334555678999999999998777664321 1578999877654
No 19
>PLN02578 hydrolase
Probab=99.01 E-value=4.5e-08 Score=99.02 Aligned_cols=100 Identities=21% Similarity=0.167 Sum_probs=69.1
Q ss_pred CEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHH
Q 012362 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (465)
Q Consensus 68 pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~ 147 (465)
|.||.+||-++.+..+ .... ..+.+..+++.+|.| |.|.|-... ...+.+..++++.+|++.
T Consensus 87 ~~vvliHG~~~~~~~w-~~~~-------------~~l~~~~~v~~~D~~-G~G~S~~~~---~~~~~~~~a~~l~~~i~~ 148 (354)
T PLN02578 87 LPIVLIHGFGASAFHW-RYNI-------------PELAKKYKVYALDLL-GFGWSDKAL---IEYDAMVWRDQVADFVKE 148 (354)
T ss_pred CeEEEECCCCCCHHHH-HHHH-------------HHHhcCCEEEEECCC-CCCCCCCcc---cccCHHHHHHHHHHHHHH
Confidence 4578999876654432 1110 123456899999999 999885321 234566677888887775
Q ss_pred HHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCC
Q 012362 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (465)
Q Consensus 148 F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~ 201 (465)
.. ..+++|.|+|+||..+..+|.+-.+ .++++++.|+.
T Consensus 149 ~~-------~~~~~lvG~S~Gg~ia~~~A~~~p~---------~v~~lvLv~~~ 186 (354)
T PLN02578 149 VV-------KEPAVLVGNSLGGFTALSTAVGYPE---------LVAGVALLNSA 186 (354)
T ss_pred hc-------cCCeEEEEECHHHHHHHHHHHhChH---------hcceEEEECCC
Confidence 42 4789999999999988888876433 68899887753
No 20
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.99 E-value=3e-08 Score=100.52 Aligned_cols=102 Identities=17% Similarity=0.113 Sum_probs=69.3
Q ss_pred CEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHH
Q 012362 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (465)
Q Consensus 68 pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~ 147 (465)
|.||.|||.|+.+..+ ..+. ....+..+++-+|.| |.|.|-.... ...+.++.++++.++|+.
T Consensus 89 p~lvllHG~~~~~~~w-~~~~-------------~~L~~~~~via~Dl~-G~G~S~~~~~--~~~~~~~~a~~l~~~l~~ 151 (360)
T PLN02679 89 PPVLLVHGFGASIPHW-RRNI-------------GVLAKNYTVYAIDLL-GFGASDKPPG--FSYTMETWAELILDFLEE 151 (360)
T ss_pred CeEEEECCCCCCHHHH-HHHH-------------HHHhcCCEEEEECCC-CCCCCCCCCC--ccccHHHHHHHHHHHHHH
Confidence 7889999999877763 2111 123456799999999 9999853221 234667788888887774
Q ss_pred HHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCC
Q 012362 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (465)
Q Consensus 148 F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~ 201 (465)
. ...+++|.|+|+||..+-.++..-. +-.++|+++.|+.
T Consensus 152 l-------~~~~~~lvGhS~Gg~ia~~~a~~~~--------P~rV~~LVLi~~~ 190 (360)
T PLN02679 152 V-------VQKPTVLIGNSVGSLACVIAASEST--------RDLVRGLVLLNCA 190 (360)
T ss_pred h-------cCCCeEEEEECHHHHHHHHHHHhcC--------hhhcCEEEEECCc
Confidence 3 2468999999999976655543211 0158899887764
No 21
>PRK06489 hypothetical protein; Provisional
Probab=98.98 E-value=1.7e-07 Score=94.96 Aligned_cols=112 Identities=21% Similarity=0.118 Sum_probs=66.2
Q ss_pred CCEEEEECCCCCccccccccccccCCCccc-C-CCCCCchhccccceeecCCCccccccccCCCC----cccChHHHHHH
Q 012362 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTY-L-KPRNSTWLKKADLLFVDNPVGTGYSYVEDNSS----FVKNDVEAAND 140 (465)
Q Consensus 67 ~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~-l-~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~----~~~s~~~~A~d 140 (465)
.|.||.+||++|.+..+. .|...+ + .+...--.+..++|.+|.| |.|.|-...... ...+.++.+++
T Consensus 69 gpplvllHG~~~~~~~~~------~~~~~~~l~~~~~~l~~~~~~Via~Dl~-GhG~S~~p~~~~~~~~~~~~~~~~a~~ 141 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFL------SPTFAGELFGPGQPLDASKYFIILPDGI-GHGKSSKPSDGLRAAFPRYDYDDMVEA 141 (360)
T ss_pred CCeEEEeCCCCCchhhhc------cchhHHHhcCCCCcccccCCEEEEeCCC-CCCCCCCCCcCCCCCCCcccHHHHHHH
Confidence 388999999998765521 000000 0 0000001356899999999 999985322110 02355666666
Q ss_pred HHHHHHHHHHhCcccCCCCE-EEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCC
Q 012362 141 LTTLLMELFNKNEILQKSPL-FIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (465)
Q Consensus 141 ~~~fL~~F~~~fP~~~~~~~-~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg 200 (465)
+..++..- +.-.++ +|+|+|+||..+-.+|.+-.+ .++++++-++
T Consensus 142 ~~~~l~~~------lgi~~~~~lvG~SmGG~vAl~~A~~~P~---------~V~~LVLi~s 187 (360)
T PRK06489 142 QYRLVTEG------LGVKHLRLILGTSMGGMHAWMWGEKYPD---------FMDALMPMAS 187 (360)
T ss_pred HHHHHHHh------cCCCceeEEEEECHHHHHHHHHHHhCch---------hhheeeeecc
Confidence 66554321 112456 489999999988888866433 5778887554
No 22
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.95 E-value=3e-08 Score=93.15 Aligned_cols=100 Identities=17% Similarity=0.180 Sum_probs=66.6
Q ss_pred CCEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHH
Q 012362 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (465)
Q Consensus 67 ~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~ 146 (465)
+|+||.++|-++.+.. +..+. ....+..+++.+|.| |.|.|-... ...+.++.++++.++++
T Consensus 13 ~~~li~~hg~~~~~~~-~~~~~-------------~~l~~~~~v~~~d~~-G~G~s~~~~---~~~~~~~~~~~~~~~i~ 74 (251)
T TIGR02427 13 APVLVFINSLGTDLRM-WDPVL-------------PALTPDFRVLRYDKR-GHGLSDAPE---GPYSIEDLADDVLALLD 74 (251)
T ss_pred CCeEEEEcCcccchhh-HHHHH-------------HHhhcccEEEEecCC-CCCCCCCCC---CCCCHHHHHHHHHHHHH
Confidence 4999999976555443 22111 112345799999999 999884321 23467777888877776
Q ss_pred HHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCC
Q 012362 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (465)
Q Consensus 147 ~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg 200 (465)
.+ ...+++|.|+|+||..+-.+|.+-.+ .++++++-++
T Consensus 75 ~~-------~~~~v~liG~S~Gg~~a~~~a~~~p~---------~v~~li~~~~ 112 (251)
T TIGR02427 75 HL-------GIERAVFCGLSLGGLIAQGLAARRPD---------RVRALVLSNT 112 (251)
T ss_pred Hh-------CCCceEEEEeCchHHHHHHHHHHCHH---------HhHHHhhccC
Confidence 43 23579999999999998888765322 3666666543
No 23
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.94 E-value=9.6e-08 Score=98.25 Aligned_cols=144 Identities=14% Similarity=0.101 Sum_probs=85.0
Q ss_pred cccccccCCCCCCceeeeeEeCCC--ceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCC
Q 012362 23 AAARALNKNQDASEEWGYVEVRPK--AHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPR 100 (465)
Q Consensus 23 ~~~~~~~~~~~~~~~sGyv~v~~~--~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~ 100 (465)
.++.+.++..+.....+++.-.++ ..+....++. ++ +.|.||.|||.++.+..+ .- +
T Consensus 66 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~p~vvllHG~~~~~~~~-~~-------------~ 124 (402)
T PLN02894 66 VQEQVNIGSGPPGSKVRWFRSASNEPRFINTVTFDS-----KE--DAPTLVMVHGYGASQGFF-FR-------------N 124 (402)
T ss_pred eeeeEeeCCCCCcccccceecccCcCCeEEEEEecC-----CC--CCCEEEEECCCCcchhHH-HH-------------H
Confidence 334455544333344455443322 2444444432 12 249999999988766542 10 1
Q ss_pred CCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHH
Q 012362 101 NSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAV 180 (465)
Q Consensus 101 ~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~ 180 (465)
-..+.+..+++-+|.| |.|.|-..+ ....+.+++.+.+.+.+..|.+.. ...+++|.|+|+||..+..+|.+-.
T Consensus 125 ~~~L~~~~~vi~~D~r-G~G~S~~~~--~~~~~~~~~~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~p 198 (402)
T PLN02894 125 FDALASRFRVIAIDQL-GWGGSSRPD--FTCKSTEETEAWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKHP 198 (402)
T ss_pred HHHHHhCCEEEEECCC-CCCCCCCCC--cccccHHHHHHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhCc
Confidence 1234556899999999 999884321 111233445555666666666533 2358999999999998877775432
Q ss_pred HHHHcCcceeeeeeEEccCCCC
Q 012362 181 KAIEAGKLKLKLGGVALGDSWI 202 (465)
Q Consensus 181 ~~~~~~~~~inLkGi~IGNg~~ 202 (465)
+ .++++++.++..
T Consensus 199 ~---------~v~~lvl~~p~~ 211 (402)
T PLN02894 199 E---------HVQHLILVGPAG 211 (402)
T ss_pred h---------hhcEEEEECCcc
Confidence 2 578888877643
No 24
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.94 E-value=1.8e-07 Score=90.89 Aligned_cols=61 Identities=8% Similarity=0.045 Sum_probs=51.2
Q ss_pred cCCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccCCcChH
Q 012362 363 KGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVDQPC 442 (465)
Q Consensus 363 ~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~DqP~ 442 (465)
-.++||++.|..|.+++..-.+.+.+.+. +..++.|.+|||+++.++|+
T Consensus 222 i~~Pvlli~G~~D~~v~~~~~~~~~~~~~-------------------------------~~~~~~i~~agH~~~~e~p~ 270 (282)
T TIGR03343 222 IKAKTLVTWGRDDRFVPLDHGLKLLWNMP-------------------------------DAQLHVFSRCGHWAQWEHAD 270 (282)
T ss_pred CCCCEEEEEccCCCcCCchhHHHHHHhCC-------------------------------CCEEEEeCCCCcCCcccCHH
Confidence 36899999999999998766666555542 56678899999999999999
Q ss_pred HHHHHHHHHhcC
Q 012362 443 IALNMLAAMTDS 454 (465)
Q Consensus 443 ~a~~mi~~fl~~ 454 (465)
...++|.+|++.
T Consensus 271 ~~~~~i~~fl~~ 282 (282)
T TIGR03343 271 AFNRLVIDFLRN 282 (282)
T ss_pred HHHHHHHHHhhC
Confidence 999999999863
No 25
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.93 E-value=1.1e-08 Score=98.18 Aligned_cols=94 Identities=18% Similarity=0.122 Sum_probs=66.0
Q ss_pred CEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHH
Q 012362 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (465)
Q Consensus 68 pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~ 147 (465)
|.||.|+|.++++..+ -- --..+.+..+++.+|.| |.|.|-..+ ..+.++.++++.+
T Consensus 14 ~~ivllHG~~~~~~~w-~~-------------~~~~L~~~~~vi~~Dl~-G~G~S~~~~----~~~~~~~~~~l~~---- 70 (256)
T PRK10349 14 VHLVLLHGWGLNAEVW-RC-------------IDEELSSHFTLHLVDLP-GFGRSRGFG----ALSLADMAEAVLQ---- 70 (256)
T ss_pred CeEEEECCCCCChhHH-HH-------------HHHHHhcCCEEEEecCC-CCCCCCCCC----CCCHHHHHHHHHh----
Confidence 5699999988887763 11 11245577999999999 999985321 2355566665442
Q ss_pred HHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCC
Q 012362 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (465)
Q Consensus 148 F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg 200 (465)
+...+++|.|+|+||..+..+|.+-.+ .++++++-|+
T Consensus 71 -------~~~~~~~lvGhS~Gg~ia~~~a~~~p~---------~v~~lili~~ 107 (256)
T PRK10349 71 -------QAPDKAIWLGWSLGGLVASQIALTHPE---------RVQALVTVAS 107 (256)
T ss_pred -------cCCCCeEEEEECHHHHHHHHHHHhChH---------hhheEEEecC
Confidence 123689999999999988888754322 5788888765
No 26
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.92 E-value=2.1e-08 Score=92.39 Aligned_cols=103 Identities=22% Similarity=0.239 Sum_probs=74.1
Q ss_pred EEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHH
Q 012362 70 ILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELF 149 (465)
Q Consensus 70 ~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~ 149 (465)
||.++|.+|.+.. +.-+. ..+.+..+++.+|.| |.|.|-.... ....+.++.++++.++|+..
T Consensus 1 vv~~hG~~~~~~~-~~~~~-------------~~l~~~~~v~~~d~~-G~G~s~~~~~-~~~~~~~~~~~~l~~~l~~~- 63 (228)
T PF12697_consen 1 VVFLHGFGGSSES-WDPLA-------------EALARGYRVIAFDLP-GHGRSDPPPD-YSPYSIEDYAEDLAELLDAL- 63 (228)
T ss_dssp EEEE-STTTTGGG-GHHHH-------------HHHHTTSEEEEEECT-TSTTSSSHSS-GSGGSHHHHHHHHHHHHHHT-
T ss_pred eEEECCCCCCHHH-HHHHH-------------HHHhCCCEEEEEecC-Cccccccccc-cCCcchhhhhhhhhhccccc-
Confidence 7899999998876 33222 123467899999999 9999975432 22456677788887777643
Q ss_pred HhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCc
Q 012362 150 NKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (465)
Q Consensus 150 ~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p 204 (465)
...+++|+|+|+||..+..++.+..+ .++|+++-++....
T Consensus 64 ------~~~~~~lvG~S~Gg~~a~~~a~~~p~---------~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 64 ------GIKKVILVGHSMGGMIALRLAARYPD---------RVKGLVLLSPPPPL 103 (228)
T ss_dssp ------TTSSEEEEEETHHHHHHHHHHHHSGG---------GEEEEEEESESSSH
T ss_pred ------cccccccccccccccccccccccccc---------ccccceeecccccc
Confidence 23789999999999999888855322 79999998877754
No 27
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.92 E-value=7.6e-09 Score=101.66 Aligned_cols=103 Identities=19% Similarity=0.211 Sum_probs=75.4
Q ss_pred CEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHH
Q 012362 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (465)
Q Consensus 68 pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~ 147 (465)
|.||++||.|+.+..+ -.+. ..+.+...++-+|.| |.|+|..... ..+.+..|+|+..+++.
T Consensus 28 ~~vvllHG~~~~~~~w-~~~~-------------~~L~~~~~via~D~~-G~G~S~~~~~---~~~~~~~a~dl~~ll~~ 89 (295)
T PRK03592 28 DPIVFLHGNPTSSYLW-RNII-------------PHLAGLGRCLAPDLI-GMGASDKPDI---DYTFADHARYLDAWFDA 89 (295)
T ss_pred CEEEEECCCCCCHHHH-HHHH-------------HHHhhCCEEEEEcCC-CCCCCCCCCC---CCCHHHHHHHHHHHHHH
Confidence 7899999999888763 2111 234556699999999 9999954322 24667778887777764
Q ss_pred HHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCc
Q 012362 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (465)
Q Consensus 148 F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p 204 (465)
. ...+++|.|+|.||..+-.+|.+..+ .++++++.|+...|
T Consensus 90 l-------~~~~~~lvGhS~Gg~ia~~~a~~~p~---------~v~~lil~~~~~~~ 130 (295)
T PRK03592 90 L-------GLDDVVLVGHDWGSALGFDWAARHPD---------RVRGIAFMEAIVRP 130 (295)
T ss_pred h-------CCCCeEEEEECHHHHHHHHHHHhChh---------heeEEEEECCCCCC
Confidence 3 24789999999999988888765433 58999998885544
No 28
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.88 E-value=3.7e-08 Score=95.86 Aligned_cols=121 Identities=13% Similarity=0.076 Sum_probs=78.7
Q ss_pred eEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccc
Q 012362 41 VEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTG 120 (465)
Q Consensus 41 v~v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvG 120 (465)
+++++ ..+.||..+. .+ . .|.||++||-++.+..+ ..+. .-..+..+++.+|.| |.|
T Consensus 7 ~~~~~-~~~~~~~~~~-----~~-~-~~plvllHG~~~~~~~w-~~~~-------------~~L~~~~~vi~~Dl~-G~G 63 (276)
T TIGR02240 7 IDLDG-QSIRTAVRPG-----KE-G-LTPLLIFNGIGANLELV-FPFI-------------EALDPDLEVIAFDVP-GVG 63 (276)
T ss_pred eccCC-cEEEEEEecC-----CC-C-CCcEEEEeCCCcchHHH-HHHH-------------HHhccCceEEEECCC-CCC
Confidence 44443 3677777541 22 2 26789999866666552 1111 012356899999999 999
Q ss_pred cccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCC
Q 012362 121 YSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (465)
Q Consensus 121 fSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg 200 (465)
.|-... ...+.+..++++.+++... .-.+++|+|+|+||..+-.+|.+-.+ .++++++.|+
T Consensus 64 ~S~~~~---~~~~~~~~~~~~~~~i~~l-------~~~~~~LvG~S~GG~va~~~a~~~p~---------~v~~lvl~~~ 124 (276)
T TIGR02240 64 GSSTPR---HPYRFPGLAKLAARMLDYL-------DYGQVNAIGVSWGGALAQQFAHDYPE---------RCKKLILAAT 124 (276)
T ss_pred CCCCCC---CcCcHHHHHHHHHHHHHHh-------CcCceEEEEECHHHHHHHHHHHHCHH---------HhhheEEecc
Confidence 994321 1235566677776666643 23689999999999988888865333 5899999887
Q ss_pred CCC
Q 012362 201 WIS 203 (465)
Q Consensus 201 ~~~ 203 (465)
...
T Consensus 125 ~~~ 127 (276)
T TIGR02240 125 AAG 127 (276)
T ss_pred CCc
Confidence 654
No 29
>PRK10749 lysophospholipase L2; Provisional
Probab=98.87 E-value=1.3e-07 Score=94.64 Aligned_cols=130 Identities=12% Similarity=0.099 Sum_probs=84.0
Q ss_pred eeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchh-ccccceeecCCC
Q 012362 39 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPV 117 (465)
Q Consensus 39 Gyv~v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~-~~~n~lyiDqPv 117 (465)
+++...++..++|+.++. .++ +|+||.+||-.+.+.. +.-+. ..+. +-.+++-+|.|
T Consensus 33 ~~~~~~~g~~l~~~~~~~----~~~---~~~vll~HG~~~~~~~-y~~~~-------------~~l~~~g~~v~~~D~~- 90 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRA----PHH---DRVVVICPGRIESYVK-YAELA-------------YDLFHLGYDVLIIDHR- 90 (330)
T ss_pred eEEEcCCCCEEEEEEccC----CCC---CcEEEEECCccchHHH-HHHHH-------------HHHHHCCCeEEEEcCC-
Confidence 444443445788888763 122 3899999998655443 21110 1132 44799999999
Q ss_pred ccccccccCCC---CcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeee
Q 012362 118 GTGYSYVEDNS---SFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGG 194 (465)
Q Consensus 118 GvGfSy~~~~~---~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkG 194 (465)
|.|.|-..... ....+-++.++|+..+++.....++ ..++++.|+|+||..+-.++.+-. -.++|
T Consensus 91 G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~l~GhSmGG~ia~~~a~~~p---------~~v~~ 158 (330)
T PRK10749 91 GQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGP---YRKRYALAHSMGGAILTLFLQRHP---------GVFDA 158 (330)
T ss_pred CCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCC---CCCeEEEEEcHHHHHHHHHHHhCC---------CCcce
Confidence 99999532111 1123567788888888876654433 578999999999987776664321 15789
Q ss_pred EEccCCCC
Q 012362 195 VALGDSWI 202 (465)
Q Consensus 195 i~IGNg~~ 202 (465)
+++.+|..
T Consensus 159 lvl~~p~~ 166 (330)
T PRK10749 159 IALCAPMF 166 (330)
T ss_pred EEEECchh
Confidence 99987765
No 30
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.86 E-value=4.8e-08 Score=99.51 Aligned_cols=105 Identities=19% Similarity=0.159 Sum_probs=72.1
Q ss_pred CCEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccccccccCCC-CcccChHHHHHHHHHHH
Q 012362 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNS-SFVKNDVEAANDLTTLL 145 (465)
Q Consensus 67 ~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~-~~~~s~~~~A~d~~~fL 145 (465)
.|.||.|||.|+.+..+ --+. ....+..+++-+|.| |.|+|...... ....+.++.++++..++
T Consensus 127 ~~~ivllHG~~~~~~~w-~~~~-------------~~L~~~~~Via~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~l~~~i 191 (383)
T PLN03084 127 NPPVLLIHGFPSQAYSY-RKVL-------------PVLSKNYHAIAFDWL-GFGFSDKPQPGYGFNYTLDEYVSSLESLI 191 (383)
T ss_pred CCeEEEECCCCCCHHHH-HHHH-------------HHHhcCCEEEEECCC-CCCCCCCCcccccccCCHHHHHHHHHHHH
Confidence 38999999999877653 2111 123456899999999 99999643221 12346777888888888
Q ss_pred HHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCC
Q 012362 146 MELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (465)
Q Consensus 146 ~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~ 202 (465)
+.. ...+++|+|+|+||..+-.+|.+-.+ .++++++-|+..
T Consensus 192 ~~l-------~~~~~~LvG~s~GG~ia~~~a~~~P~---------~v~~lILi~~~~ 232 (383)
T PLN03084 192 DEL-------KSDKVSLVVQGYFSPPVVKYASAHPD---------KIKKLILLNPPL 232 (383)
T ss_pred HHh-------CCCCceEEEECHHHHHHHHHHHhChH---------hhcEEEEECCCC
Confidence 754 23579999999999765555543222 588999988653
No 31
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.86 E-value=3.9e-08 Score=92.11 Aligned_cols=60 Identities=17% Similarity=0.081 Sum_probs=49.2
Q ss_pred hcCCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccCCcCh
Q 012362 362 AKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVDQP 441 (465)
Q Consensus 362 ~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~DqP 441 (465)
+-..+||+.+|..|.+++....+.+.+.+. +.++..+.++||+++.++|
T Consensus 186 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~gH~~~~e~p 234 (245)
T TIGR01738 186 NISVPFLRLYGYLDGLVPAKVVPYLDKLAP-------------------------------HSELYIFAKAAHAPFLSHA 234 (245)
T ss_pred cCCCCEEEEeecCCcccCHHHHHHHHHhCC-------------------------------CCeEEEeCCCCCCccccCH
Confidence 336899999999999999776665544432 3456789999999999999
Q ss_pred HHHHHHHHHHh
Q 012362 442 CIALNMLAAMT 452 (465)
Q Consensus 442 ~~a~~mi~~fl 452 (465)
+...+.|.+||
T Consensus 235 ~~~~~~i~~fi 245 (245)
T TIGR01738 235 EAFCALLVAFK 245 (245)
T ss_pred HHHHHHHHhhC
Confidence 99999999986
No 32
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.85 E-value=4.3e-07 Score=93.01 Aligned_cols=126 Identities=18% Similarity=0.200 Sum_probs=84.3
Q ss_pred CceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchh-ccccceeecCCCccccccc
Q 012362 46 KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPVGTGYSYV 124 (465)
Q Consensus 46 ~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~-~~~n~lyiDqPvGvGfSy~ 124 (465)
+..+|++.++.. .. +.+|+||++||.++.+.. +-.+. ..+. +-++++-+|.| |.|.|-.
T Consensus 120 ~~~l~~~~~~p~----~~-~~~~~Vl~lHG~~~~~~~-~~~~a-------------~~L~~~Gy~V~~~D~r-GhG~S~~ 179 (395)
T PLN02652 120 RNALFCRSWAPA----AG-EMRGILIIIHGLNEHSGR-YLHFA-------------KQLTSCGFGVYAMDWI-GHGGSDG 179 (395)
T ss_pred CCEEEEEEecCC----CC-CCceEEEEECCchHHHHH-HHHHH-------------HHHHHCCCEEEEeCCC-CCCCCCC
Confidence 357888887642 12 224899999998876654 21111 1233 35689999999 9998854
Q ss_pred cCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCC
Q 012362 125 EDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (465)
Q Consensus 125 ~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~ 203 (465)
.. .+..+.+..++|+..+++..-..+| +.+++|+|+|+||..+..++.+ .+..-.++|+++.+|++.
T Consensus 180 ~~--~~~~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~~-------p~~~~~v~glVL~sP~l~ 246 (395)
T PLN02652 180 LH--GYVPSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAASY-------PSIEDKLEGIVLTSPALR 246 (395)
T ss_pred CC--CCCcCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHhc-------cCcccccceEEEECcccc
Confidence 32 2345667778888888887766665 3589999999999877655421 111125889999877653
No 33
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.85 E-value=2.1e-07 Score=90.24 Aligned_cols=135 Identities=20% Similarity=0.204 Sum_probs=87.6
Q ss_pred ceeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchhcc-ccceeec
Q 012362 36 EEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKK-ADLLFVD 114 (465)
Q Consensus 36 ~~sGyv~v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~-~n~lyiD 114 (465)
...+|+++++ +++++.|. -++. .|+||.|+|=|-.+=++- .---..... ..++.+|
T Consensus 22 ~~hk~~~~~g---I~~h~~e~-----g~~~-gP~illlHGfPe~wyswr--------------~q~~~la~~~~rviA~D 78 (322)
T KOG4178|consen 22 ISHKFVTYKG---IRLHYVEG-----GPGD-GPIVLLLHGFPESWYSWR--------------HQIPGLASRGYRVIAPD 78 (322)
T ss_pred cceeeEEEcc---EEEEEEee-----cCCC-CCEEEEEccCCccchhhh--------------hhhhhhhhcceEEEecC
Confidence 3558999864 88999884 3434 399999999996553320 000011222 7899999
Q ss_pred CCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeee
Q 012362 115 NPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGG 194 (465)
Q Consensus 115 qPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkG 194 (465)
.+ |-|+|-.... ....|....+.|+..+|.. +..+++++.|++||+.-+=.+|....+..+ + .+++.+
T Consensus 79 lr-GyG~Sd~P~~-~~~Yt~~~l~~di~~lld~-------Lg~~k~~lvgHDwGaivaw~la~~~Perv~-~--lv~~nv 146 (322)
T KOG4178|consen 79 LR-GYGFSDAPPH-ISEYTIDELVGDIVALLDH-------LGLKKAFLVGHDWGAIVAWRLALFYPERVD-G--LVTLNV 146 (322)
T ss_pred CC-CCCCCCCCCC-cceeeHHHHHHHHHHHHHH-------hccceeEEEeccchhHHHHHHHHhChhhcc-e--EEEecC
Confidence 99 9999965432 1345677778888777763 336789999999999988888866544211 1 233333
Q ss_pred EEccCCCCCccc
Q 012362 195 VALGDSWISPED 206 (465)
Q Consensus 195 i~IGNg~~~p~~ 206 (465)
... |+..+|.+
T Consensus 147 ~~~-~p~~~~~~ 157 (322)
T KOG4178|consen 147 PFP-NPKLKPLD 157 (322)
T ss_pred CCC-Ccccchhh
Confidence 333 66666654
No 34
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.83 E-value=8.2e-08 Score=91.06 Aligned_cols=100 Identities=21% Similarity=0.269 Sum_probs=69.8
Q ss_pred CCEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHH
Q 012362 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (465)
Q Consensus 67 ~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~ 146 (465)
.|.||+++|.||.+.++ -.+. . .. +..+++.+|.| |.|.|.... ..+.++.|+++.++|.
T Consensus 2 ~p~vvllHG~~~~~~~w-~~~~-----------~--~l-~~~~vi~~D~~-G~G~S~~~~----~~~~~~~~~~l~~~l~ 61 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDW-QPVG-----------E--AL-PDYPRLYIDLP-GHGGSAAIS----VDGFADVSRLLSQTLQ 61 (242)
T ss_pred CCEEEEECCCCCChHHH-HHHH-----------H--Hc-CCCCEEEecCC-CCCCCCCcc----ccCHHHHHHHHHHHHH
Confidence 38899999999988763 2111 1 11 34899999999 999985321 2366677777777776
Q ss_pred HHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCC
Q 012362 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (465)
Q Consensus 147 ~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~ 201 (465)
. +...+++++|+|+||..+-.+|.+... -.++++++.++.
T Consensus 62 ~-------~~~~~~~lvG~S~Gg~va~~~a~~~~~--------~~v~~lvl~~~~ 101 (242)
T PRK11126 62 S-------YNILPYWLVGYSLGGRIAMYYACQGLA--------GGLCGLIVEGGN 101 (242)
T ss_pred H-------cCCCCeEEEEECHHHHHHHHHHHhCCc--------ccccEEEEeCCC
Confidence 3 235799999999999988888765311 027888886654
No 35
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.82 E-value=1e-06 Score=91.86 Aligned_cols=132 Identities=16% Similarity=0.127 Sum_probs=82.2
Q ss_pred ceeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecC
Q 012362 36 EEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDN 115 (465)
Q Consensus 36 ~~sGyv~v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDq 115 (465)
...-|++.++ ..+|++....+ +.+ . .|.||++||.+|.+.++...+. |. + ...+.+...++.+|.
T Consensus 176 ~~~~~~~~~~-~~l~~~~~gp~---~~~-~-k~~VVLlHG~~~s~~~W~~~~~---~~---L---~~~~~~~yrVia~Dl 240 (481)
T PLN03087 176 FCTSWLSSSN-ESLFVHVQQPK---DNK-A-KEDVLFIHGFISSSAFWTETLF---PN---F---SDAAKSTYRLFAVDL 240 (481)
T ss_pred eeeeeEeeCC-eEEEEEEecCC---CCC-C-CCeEEEECCCCccHHHHHHHHH---HH---H---HHHhhCCCEEEEECC
Confidence 3446888765 47888776642 112 1 3789999999988876310000 00 0 002345789999999
Q ss_pred CCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeE
Q 012362 116 PVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGV 195 (465)
Q Consensus 116 PvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi 195 (465)
| |.|.|-.... ...+.++.++++. +.+.+.. ...+++|.|+|+||..+-.+|.+-.+ .++++
T Consensus 241 ~-G~G~S~~p~~--~~ytl~~~a~~l~---~~ll~~l---g~~k~~LVGhSmGG~iAl~~A~~~Pe---------~V~~L 302 (481)
T PLN03087 241 L-GFGRSPKPAD--SLYTLREHLEMIE---RSVLERY---KVKSFHIVAHSLGCILALALAVKHPG---------AVKSL 302 (481)
T ss_pred C-CCCCCcCCCC--CcCCHHHHHHHHH---HHHHHHc---CCCCEEEEEECHHHHHHHHHHHhChH---------hccEE
Confidence 9 9998843211 1235555565553 1233322 24689999999999999888765333 57888
Q ss_pred EccCC
Q 012362 196 ALGDS 200 (465)
Q Consensus 196 ~IGNg 200 (465)
++.++
T Consensus 303 VLi~~ 307 (481)
T PLN03087 303 TLLAP 307 (481)
T ss_pred EEECC
Confidence 88765
No 36
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.80 E-value=2.2e-07 Score=90.43 Aligned_cols=131 Identities=19% Similarity=0.245 Sum_probs=85.6
Q ss_pred eeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCC
Q 012362 38 WGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPV 117 (465)
Q Consensus 38 sGyv~v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPv 117 (465)
.=|+.+.+....+..-+.- .+ ++++-++.+|| =|+++ |+|. .|=.+..+.-||..||+|
T Consensus 67 ~~~v~i~~~~~iw~~~~~~-----~~-~~~~plVliHG-yGAg~---g~f~----------~Nf~~La~~~~vyaiDll- 125 (365)
T KOG4409|consen 67 KKYVRIPNGIEIWTITVSN-----ES-ANKTPLVLIHG-YGAGL---GLFF----------RNFDDLAKIRNVYAIDLL- 125 (365)
T ss_pred eeeeecCCCceeEEEeecc-----cc-cCCCcEEEEec-cchhH---HHHH----------HhhhhhhhcCceEEeccc-
Confidence 3477776443443333321 12 33466778896 33332 2221 133467779999999999
Q ss_pred ccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEc
Q 012362 118 GTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVAL 197 (465)
Q Consensus 118 GvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~I 197 (465)
|-|+|--.. +..+.+.+-+.+.+-+++|....- -.+++|.|||+||...-..|.+-.+ .++-++|
T Consensus 126 G~G~SSRP~---F~~d~~~~e~~fvesiE~WR~~~~---L~KmilvGHSfGGYLaa~YAlKyPe---------rV~kLiL 190 (365)
T KOG4409|consen 126 GFGRSSRPK---FSIDPTTAEKEFVESIEQWRKKMG---LEKMILVGHSFGGYLAAKYALKYPE---------RVEKLIL 190 (365)
T ss_pred CCCCCCCCC---CCCCcccchHHHHHHHHHHHHHcC---CcceeEeeccchHHHHHHHHHhChH---------hhceEEE
Confidence 999996432 333444455588899999987653 3589999999999988888766555 4778898
Q ss_pred cCCCCCc
Q 012362 198 GDSWISP 204 (465)
Q Consensus 198 GNg~~~p 204 (465)
.+||--|
T Consensus 191 vsP~Gf~ 197 (365)
T KOG4409|consen 191 VSPWGFP 197 (365)
T ss_pred ecccccc
Confidence 7776544
No 37
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.75 E-value=1.9e-07 Score=87.33 Aligned_cols=104 Identities=25% Similarity=0.315 Sum_probs=67.5
Q ss_pred CEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHH
Q 012362 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (465)
Q Consensus 68 pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~ 147 (465)
|.||.++|.+|.+.. +-.+. ....+..+++-+|.| |.|.|.... .....+.++.++++. ..
T Consensus 2 ~~vv~~hG~~~~~~~-~~~~~-------------~~L~~~~~v~~~d~~-g~G~s~~~~-~~~~~~~~~~~~~~~---~~ 62 (251)
T TIGR03695 2 PVLVFLHGFLGSGAD-WQALI-------------ELLGPHFRCLAIDLP-GHGSSQSPD-EIERYDFEEAAQDIL---AT 62 (251)
T ss_pred CEEEEEcCCCCchhh-HHHHH-------------HHhcccCeEEEEcCC-CCCCCCCCC-ccChhhHHHHHHHHH---HH
Confidence 789999998887765 21110 111245899999999 999885421 112345555666522 22
Q ss_pred HHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCC
Q 012362 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (465)
Q Consensus 148 F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~ 202 (465)
+.+.. ..++++|.|+|+||..+..+|.+.-+ .++++++-++..
T Consensus 63 ~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~~---------~v~~lil~~~~~ 105 (251)
T TIGR03695 63 LLDQL---GIEPFFLVGYSMGGRIALYYALQYPE---------RVQGLILESGSP 105 (251)
T ss_pred HHHHc---CCCeEEEEEeccHHHHHHHHHHhCch---------heeeeEEecCCC
Confidence 22322 25789999999999998888865422 588888876643
No 38
>PLN02965 Probable pheophorbidase
Probab=98.64 E-value=8.3e-07 Score=85.31 Aligned_cols=100 Identities=17% Similarity=0.152 Sum_probs=67.8
Q ss_pred EEEECCCCCccccccccccccCCCcccCCCCCCch-hccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHH
Q 012362 70 ILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTW-LKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMEL 148 (465)
Q Consensus 70 ~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw-~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F 148 (465)
||.+||.++.+..+- ..-... .+...+|-+|.| |.|.|-.... ...+.++.|+|+.+++...
T Consensus 6 vvllHG~~~~~~~w~--------------~~~~~L~~~~~~via~Dl~-G~G~S~~~~~--~~~~~~~~a~dl~~~l~~l 68 (255)
T PLN02965 6 FVFVHGASHGAWCWY--------------KLATLLDAAGFKSTCVDLT-GAGISLTDSN--TVSSSDQYNRPLFALLSDL 68 (255)
T ss_pred EEEECCCCCCcCcHH--------------HHHHHHhhCCceEEEecCC-cCCCCCCCcc--ccCCHHHHHHHHHHHHHhc
Confidence 888999886555431 011123 234789999999 9999943211 2345677788887777631
Q ss_pred HHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCC
Q 012362 149 FNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (465)
Q Consensus 149 ~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~ 201 (465)
+ ..++++|.|+|+||..+..+|.+..+ .++++++-|+.
T Consensus 69 ----~--~~~~~~lvGhSmGG~ia~~~a~~~p~---------~v~~lvl~~~~ 106 (255)
T PLN02965 69 ----P--PDHKVILVGHSIGGGSVTEALCKFTD---------KISMAIYVAAA 106 (255)
T ss_pred ----C--CCCCEEEEecCcchHHHHHHHHhCch---------heeEEEEEccc
Confidence 1 12599999999999988888865432 57888887664
No 39
>PRK07581 hypothetical protein; Validated
Probab=98.59 E-value=5.3e-06 Score=83.27 Aligned_cols=59 Identities=17% Similarity=0.094 Sum_probs=51.2
Q ss_pred CCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcC-cccccCCcChH
Q 012362 364 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILG-AGHFVPVDQPC 442 (465)
Q Consensus 364 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~-AGHmvP~DqP~ 442 (465)
.++||++.|+.|.+++....+.+.+.+. +.++++|.+ |||+++.+||+
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~l~~~ip-------------------------------~a~l~~i~~~~GH~~~~~~~~ 323 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEAEAALIP-------------------------------NAELRPIESIWGHLAGFGQNP 323 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC-------------------------------CCeEEEeCCCCCccccccCcH
Confidence 6899999999999999888777666553 345678998 99999999999
Q ss_pred HHHHHHHHHhc
Q 012362 443 IALNMLAAMTD 453 (465)
Q Consensus 443 ~a~~mi~~fl~ 453 (465)
....++++|++
T Consensus 324 ~~~~~~~~~~~ 334 (339)
T PRK07581 324 ADIAFIDAALK 334 (339)
T ss_pred HHHHHHHHHHH
Confidence 99999999986
No 40
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.58 E-value=1.7e-06 Score=103.05 Aligned_cols=103 Identities=20% Similarity=0.236 Sum_probs=71.6
Q ss_pred CCEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccccccccCC-----CCcccChHHHHHHH
Q 012362 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDN-----SSFVKNDVEAANDL 141 (465)
Q Consensus 67 ~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~-----~~~~~s~~~~A~d~ 141 (465)
.|.||+|||.+|.+..+. -+. ....+..+++.+|.| |.|.|..... .....+.+..|+++
T Consensus 1371 ~~~vVllHG~~~s~~~w~-~~~-------------~~L~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~~~si~~~a~~l 1435 (1655)
T PLN02980 1371 GSVVLFLHGFLGTGEDWI-PIM-------------KAISGSARCISIDLP-GHGGSKIQNHAKETQTEPTLSVELVADLL 1435 (1655)
T ss_pred CCeEEEECCCCCCHHHHH-HHH-------------HHHhCCCEEEEEcCC-CCCCCCCccccccccccccCCHHHHHHHH
Confidence 389999999999987632 111 123345799999999 9998864321 11234567778877
Q ss_pred HHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCC
Q 012362 142 TTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (465)
Q Consensus 142 ~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg 200 (465)
..+++. +...+++|+|+|+||..+-.+|.+..+ .++++++-+|
T Consensus 1436 ~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~---------~V~~lVlis~ 1478 (1655)
T PLN02980 1436 YKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSD---------KIEGAVIISG 1478 (1655)
T ss_pred HHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChH---------hhCEEEEECC
Confidence 777663 234689999999999988888765433 5778877655
No 41
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.55 E-value=2.5e-06 Score=86.34 Aligned_cols=101 Identities=19% Similarity=0.115 Sum_probs=68.1
Q ss_pred CCEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHH
Q 012362 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (465)
Q Consensus 67 ~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~ 146 (465)
.|.||++||.+|.+.. +..+.+ ...+..+++-+|.| |.|.|-... ...+.++.++++..+++
T Consensus 131 ~~~vl~~HG~~~~~~~-~~~~~~-------------~l~~~~~v~~~d~~-g~G~s~~~~---~~~~~~~~~~~~~~~~~ 192 (371)
T PRK14875 131 GTPVVLIHGFGGDLNN-WLFNHA-------------ALAAGRPVIALDLP-GHGASSKAV---GAGSLDELAAAVLAFLD 192 (371)
T ss_pred CCeEEEECCCCCccch-HHHHHH-------------HHhcCCEEEEEcCC-CCCCCCCCC---CCCCHHHHHHHHHHHHH
Confidence 3889999999888776 322211 12234789999999 999884321 23456666776666664
Q ss_pred HHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCC
Q 012362 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (465)
Q Consensus 147 ~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~ 201 (465)
. +...+++|.|+|+||..+..+|..-.+ .++++++-++.
T Consensus 193 ~-------~~~~~~~lvG~S~Gg~~a~~~a~~~~~---------~v~~lv~~~~~ 231 (371)
T PRK14875 193 A-------LGIERAHLVGHSMGGAVALRLAARAPQ---------RVASLTLIAPA 231 (371)
T ss_pred h-------cCCccEEEEeechHHHHHHHHHHhCch---------heeEEEEECcC
Confidence 3 224689999999999999888765221 57777776543
No 42
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.52 E-value=5.1e-06 Score=83.66 Aligned_cols=62 Identities=15% Similarity=-0.000 Sum_probs=52.0
Q ss_pred CCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcC-cccccCCcChH
Q 012362 364 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILG-AGHFVPVDQPC 442 (465)
Q Consensus 364 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~-AGHmvP~DqP~ 442 (465)
.+++||+.|+.|.+++....++..+.+. .+..+++|.+ |||+++.++|+
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~------------------------------p~a~l~~i~~~aGH~~~lE~Pe 326 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG------------------------------PRGSLRVLRSPYGHDAFLKETD 326 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC------------------------------CCCeEEEEeCCccHHHHhcCHH
Confidence 5899999999999999887777777652 1345677874 99999999999
Q ss_pred HHHHHHHHHhcCC
Q 012362 443 IALNMLAAMTDSP 455 (465)
Q Consensus 443 ~a~~mi~~fl~~~ 455 (465)
+...+|.+||...
T Consensus 327 ~~~~~l~~FL~~~ 339 (343)
T PRK08775 327 RIDAILTTALRST 339 (343)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999764
No 43
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.41 E-value=4.1e-05 Score=76.80 Aligned_cols=144 Identities=18% Similarity=0.162 Sum_probs=85.5
Q ss_pred CceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccc----c----CCCcccCCCCCC---------ch-hcc
Q 012362 46 KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEE----V----GPFDTYLKPRNS---------TW-LKK 107 (465)
Q Consensus 46 ~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E----~----GP~~~~l~~~~~---------sw-~~~ 107 (465)
+..++++.++. .+| +.+|+.+||=-+-+.. -|++ . +|+.++ .+.| .. .+-
T Consensus 7 g~~l~~~~~~~----~~~---kg~v~i~HG~~eh~~~---~~~~~~~~~~~~~~~~~~~--~~ry~~y~~~~~~~l~~~G 74 (332)
T TIGR01607 7 GLLLKTYSWIV----KNA---IGIIVLIHGLKSHLRL---QFLKINAKIVNNDRAVLID--TDNYYIYKDSWIENFNKNG 74 (332)
T ss_pred CCeEEEeeeec----cCC---eEEEEEECCCchhhhh---hhhhcCcccCCCCeeEEEc--CCcceEeeHHHHHHHHHCC
Confidence 34677877763 234 4799999975444431 1111 0 111121 1122 23 245
Q ss_pred ccceeecCCCccccccccCC-CCcccChHHHHHHHHHHHHHHHHhC----------------cccC-CCCEEEEeccccc
Q 012362 108 ADLLFVDNPVGTGYSYVEDN-SSFVKNDVEAANDLTTLLMELFNKN----------------EILQ-KSPLFIVAESYGG 169 (465)
Q Consensus 108 ~n~lyiDqPvGvGfSy~~~~-~~~~~s~~~~A~d~~~fL~~F~~~f----------------P~~~-~~~~~I~GESYgG 169 (465)
.+|+-+|.| |.|.|-+.+. .....+-++.++|+..+++..-+.. .++. +.|++|.|+|.||
T Consensus 75 ~~V~~~D~r-GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg 153 (332)
T TIGR01607 75 YSVYGLDLQ-GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGG 153 (332)
T ss_pred CcEEEeccc-ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCcc
Confidence 789999998 9999975422 2223567788889988888654310 0232 6799999999999
Q ss_pred chHHHHHHHHHHHHHcCcceeeeeeEEccCCCCC
Q 012362 170 KFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (465)
Q Consensus 170 ~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~ 203 (465)
..+..++....+... ..-...++|+++-.|.+.
T Consensus 154 ~i~~~~~~~~~~~~~-~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 154 NIALRLLELLGKSNE-NNDKLNIKGCISLSGMIS 186 (332)
T ss_pred HHHHHHHHHhccccc-cccccccceEEEeccceE
Confidence 988776654422100 001236889987666653
No 44
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.41 E-value=6.7e-06 Score=82.04 Aligned_cols=61 Identities=25% Similarity=0.278 Sum_probs=52.0
Q ss_pred CCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccCCcChHH
Q 012362 364 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVDQPCI 443 (465)
Q Consensus 364 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~DqP~~ 443 (465)
+.+|||..|+.|.+++....+...+++ .|..+..|.+|||.+..++|++
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~~-------------------------------pn~~~~~I~~~gH~~h~e~Pe~ 312 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKKL-------------------------------PNAELVEIPGAGHLPHLERPEE 312 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhhC-------------------------------CCceEEEeCCCCcccccCCHHH
Confidence 378999999999999988555544443 2788999999999999999999
Q ss_pred HHHHHHHHhcCC
Q 012362 444 ALNMLAAMTDSP 455 (465)
Q Consensus 444 a~~mi~~fl~~~ 455 (465)
....|..|+.+-
T Consensus 313 ~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 313 VAALLRSFIARL 324 (326)
T ss_pred HHHHHHHHHHHh
Confidence 999999999753
No 45
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.39 E-value=4.4e-05 Score=78.04 Aligned_cols=65 Identities=11% Similarity=0.009 Sum_probs=53.3
Q ss_pred CCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEc-CcccccCCcChH
Q 012362 364 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWIL-GAGHFVPVDQPC 442 (465)
Q Consensus 364 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~-~AGHmvP~DqP~ 442 (465)
.+||||..|+.|.++|....++..+.+. +.+ .+.+++.|. ++||+.+.++|+
T Consensus 309 ~~PtLvI~G~~D~~~p~~~~~~la~~i~------------------~a~---------~~~~l~~i~~~~GH~~~le~p~ 361 (379)
T PRK00175 309 KARFLVVSFTSDWLFPPARSREIVDALL------------------AAG---------ADVSYAEIDSPYGHDAFLLDDP 361 (379)
T ss_pred CCCEEEEEECCccccCHHHHHHHHHHHH------------------hcC---------CCeEEEEeCCCCCchhHhcCHH
Confidence 6899999999999999888877766664 000 134677786 999999999999
Q ss_pred HHHHHHHHHhcCC
Q 012362 443 IALNMLAAMTDSP 455 (465)
Q Consensus 443 ~a~~mi~~fl~~~ 455 (465)
+..+.|.+|+.+.
T Consensus 362 ~~~~~L~~FL~~~ 374 (379)
T PRK00175 362 RYGRLVRAFLERA 374 (379)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999874
No 46
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.34 E-value=4.9e-06 Score=90.37 Aligned_cols=116 Identities=23% Similarity=0.393 Sum_probs=73.4
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCc-hhccccceeecCCCcc-cc
Q 012362 44 RPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNST-WLKKADLLFVDNPVGT-GY 121 (465)
Q Consensus 44 ~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~s-w~~~~n~lyiDqPvGv-Gf 121 (465)
.++..+-.|++.-.. .+|.++.|+|++++||| +++ .| . . ...+... +.+-+.|++++ |.|+ ||
T Consensus 373 ~dG~~i~~~l~~P~~--~~~~k~yP~i~~~hGGP--~~~-~~-~------~--~~~~~q~~~~~G~~V~~~n-~RGS~Gy 437 (620)
T COG1506 373 NDGETIHGWLYKPPG--FDPRKKYPLIVYIHGGP--SAQ-VG-Y------S--FNPEIQVLASAGYAVLAPN-YRGSTGY 437 (620)
T ss_pred CCCCEEEEEEecCCC--CCCCCCCCEEEEeCCCC--ccc-cc-c------c--cchhhHHHhcCCeEEEEeC-CCCCCcc
Confidence 344588888887532 34545469999999999 444 44 0 1 1111222 34677889998 4444 43
Q ss_pred ccc--cCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHH
Q 012362 122 SYV--EDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGL 177 (465)
Q Consensus 122 Sy~--~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~ 177 (465)
+.. .... -.--....+|+..++. |+.+.|..-...+.|+|.||||...-.++.
T Consensus 438 G~~F~~~~~--~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~ 492 (620)
T COG1506 438 GREFADAIR--GDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAAT 492 (620)
T ss_pred HHHHHHhhh--hccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHh
Confidence 321 1000 0011134677888888 889999877788999999999987666653
No 47
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.30 E-value=3.1e-06 Score=83.72 Aligned_cols=125 Identities=18% Similarity=0.285 Sum_probs=81.5
Q ss_pred eeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchh-ccccceeecCC
Q 012362 38 WGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNP 116 (465)
Q Consensus 38 sGyv~v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~-~~~n~lyiDqP 116 (465)
.+|+.+.++..++|+-+. ++ +. |.||.+||+||.++. .... ..|. +..+++-+|.|
T Consensus 6 ~~~~~~~~~~~l~y~~~g------~~-~~-~~lvllHG~~~~~~~-~~~~--------------~~~~~~~~~vi~~D~~ 62 (306)
T TIGR01249 6 SGYLNVSDNHQLYYEQSG------NP-DG-KPVVFLHGGPGSGTD-PGCR--------------RFFDPETYRIVLFDQR 62 (306)
T ss_pred CCeEEcCCCcEEEEEECc------CC-CC-CEEEEECCCCCCCCC-HHHH--------------hccCccCCEEEEECCC
Confidence 479999877778775532 23 22 457889999988653 1100 1121 45799999999
Q ss_pred CccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEE
Q 012362 117 VGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVA 196 (465)
Q Consensus 117 vGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~ 196 (465)
|.|.|..... ....+.++.++|+..+++. . ...+++++|+||||..+..++.+-.+ .+++++
T Consensus 63 -G~G~S~~~~~-~~~~~~~~~~~dl~~l~~~----l---~~~~~~lvG~S~GG~ia~~~a~~~p~---------~v~~lv 124 (306)
T TIGR01249 63 -GCGKSTPHAC-LEENTTWDLVADIEKLREK----L---GIKNWLVFGGSWGSTLALAYAQTHPE---------VVTGLV 124 (306)
T ss_pred -CCCCCCCCCC-cccCCHHHHHHHHHHHHHH----c---CCCCEEEEEECHHHHHHHHHHHHChH---------hhhhhe
Confidence 9999964321 1233455666666555542 2 23579999999999988888765432 577888
Q ss_pred ccCCCCC
Q 012362 197 LGDSWIS 203 (465)
Q Consensus 197 IGNg~~~ 203 (465)
+-+..+.
T Consensus 125 l~~~~~~ 131 (306)
T TIGR01249 125 LRGIFLL 131 (306)
T ss_pred eeccccC
Confidence 8766554
No 48
>PLN02511 hydrolase
Probab=98.24 E-value=3.8e-05 Score=78.68 Aligned_cols=118 Identities=14% Similarity=0.097 Sum_probs=72.1
Q ss_pred eeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCcccccc-ccccccCCCcccCCCCCCchhccccceeecCCC
Q 012362 39 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGI-GNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPV 117 (465)
Q Consensus 39 Gyv~v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~-g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPv 117 (465)
-++...++..+.+..+..... ..+ .++|+||.|+|..|+|...+ --+. ..-..+-.+++-+|.|
T Consensus 74 e~l~~~DG~~~~ldw~~~~~~-~~~-~~~p~vvllHG~~g~s~~~y~~~~~------------~~~~~~g~~vv~~d~r- 138 (388)
T PLN02511 74 ECLRTPDGGAVALDWVSGDDR-ALP-ADAPVLILLPGLTGGSDDSYVRHML------------LRARSKGWRVVVFNSR- 138 (388)
T ss_pred EEEECCCCCEEEEEecCcccc-cCC-CCCCEEEEECCCCCCCCCHHHHHHH------------HHHHHCCCEEEEEecC-
Confidence 466666555565544432111 112 33599999999999874311 0000 0112456799999999
Q ss_pred ccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHH
Q 012362 118 GTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGL 177 (465)
Q Consensus 118 GvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~ 177 (465)
|.|-|-...... .....++|+..+++..-.++| +.+++++|+|.||..+-.++.
T Consensus 139 G~G~s~~~~~~~---~~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~ 192 (388)
T PLN02511 139 GCADSPVTTPQF---YSASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLG 192 (388)
T ss_pred CCCCCCCCCcCE---EcCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHH
Confidence 998885432211 123446677777776666666 478999999999988766553
No 49
>PRK05855 short chain dehydrogenase; Validated
Probab=98.12 E-value=0.00012 Score=78.70 Aligned_cols=87 Identities=15% Similarity=0.237 Sum_probs=60.2
Q ss_pred CCEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHH
Q 012362 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (465)
Q Consensus 67 ~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~ 146 (465)
.|.||.+||.++.+.. +.-+. .-+.+..+++-+|.| |.|.|...... ...+.++.++|+..+++
T Consensus 25 ~~~ivllHG~~~~~~~-w~~~~-------------~~L~~~~~Vi~~D~~-G~G~S~~~~~~-~~~~~~~~a~dl~~~i~ 88 (582)
T PRK05855 25 RPTVVLVHGYPDNHEV-WDGVA-------------PLLADRFRVVAYDVR-GAGRSSAPKRT-AAYTLARLADDFAAVID 88 (582)
T ss_pred CCeEEEEcCCCchHHH-HHHHH-------------HHhhcceEEEEecCC-CCCCCCCCCcc-cccCHHHHHHHHHHHHH
Confidence 4899999999877765 22111 112345789999999 99999743221 23467888899988887
Q ss_pred HHHHhCcccCCCCEEEEecccccchHHHH
Q 012362 147 ELFNKNEILQKSPLFIVAESYGGKFAATL 175 (465)
Q Consensus 147 ~F~~~fP~~~~~~~~I~GESYgG~YvP~i 175 (465)
..- ..++++|+|+|+||..+-.+
T Consensus 89 ~l~------~~~~~~lvGhS~Gg~~a~~~ 111 (582)
T PRK05855 89 AVS------PDRPVHLLAHDWGSIQGWEA 111 (582)
T ss_pred HhC------CCCcEEEEecChHHHHHHHH
Confidence 531 13579999999999554433
No 50
>PRK10566 esterase; Provisional
Probab=98.08 E-value=0.00012 Score=69.78 Aligned_cols=96 Identities=17% Similarity=0.225 Sum_probs=58.7
Q ss_pred CCEEEEECCCCCccccccccccccCCCcccCCCCCCchhcc-ccceeecCCCccccccccCCCCcc----cChHHHHHHH
Q 012362 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKK-ADLLFVDNPVGTGYSYVEDNSSFV----KNDVEAANDL 141 (465)
Q Consensus 67 ~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~-~n~lyiDqPvGvGfSy~~~~~~~~----~s~~~~A~d~ 141 (465)
.|+||.+||++|.... +..+ ...+.+. .+++.+|.| |.|-|+........ .......+|+
T Consensus 27 ~p~vv~~HG~~~~~~~-~~~~-------------~~~l~~~G~~v~~~d~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (249)
T PRK10566 27 LPTVFFYHGFTSSKLV-YSYF-------------AVALAQAGFRVIMPDAP-MHGARFSGDEARRLNHFWQILLQNMQEF 91 (249)
T ss_pred CCEEEEeCCCCcccch-HHHH-------------HHHHHhCCCEEEEecCC-cccccCCCccccchhhHHHHHHHHHHHH
Confidence 5999999999887654 2111 1234443 789999988 88876532211100 0112334555
Q ss_pred HHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHH
Q 012362 142 TTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (465)
Q Consensus 142 ~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~ 178 (465)
..++. ++...+.....+++|+|+|+||..+..++.+
T Consensus 92 ~~~~~-~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 92 PTLRA-AIREEGWLLDDRLAVGGASMGGMTALGIMAR 127 (249)
T ss_pred HHHHH-HHHhcCCcCccceeEEeecccHHHHHHHHHh
Confidence 44443 4444443445789999999999998877643
No 51
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.03 E-value=0.00024 Score=70.06 Aligned_cols=134 Identities=18% Similarity=0.272 Sum_probs=92.5
Q ss_pred ceeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchh-ccccceeec
Q 012362 36 EEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVD 114 (465)
Q Consensus 36 ~~sGyv~v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~-~~~n~lyiD 114 (465)
...|+....++..++|+.++.. .++ +.+|+++||.=..+.- +--+. +-++ +-+.++=+|
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~---~~~---~g~Vvl~HG~~Eh~~r-y~~la-------------~~l~~~G~~V~~~D 68 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAP---EPP---KGVVVLVHGLGEHSGR-YEELA-------------DDLAARGFDVYALD 68 (298)
T ss_pred cccceeecCCCceEEEEeecCC---CCC---CcEEEEecCchHHHHH-HHHHH-------------HHHHhCCCEEEEec
Confidence 3446666666779999999863 122 2799999988777754 31110 1122 446788899
Q ss_pred CCCcccccc-ccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeee
Q 012362 115 NPVGTGYSY-VEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLG 193 (465)
Q Consensus 115 qPvGvGfSy-~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLk 193 (465)
+| |.|.|. +.. ..+.+-.+.-.|+-.+++..-...| ..|+||+|+|.||-.+...+.... -+++
T Consensus 69 ~R-GhG~S~r~~r--g~~~~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg~Ia~~~~~~~~---------~~i~ 133 (298)
T COG2267 69 LR-GHGRSPRGQR--GHVDSFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGGLIALLYLARYP---------PRID 133 (298)
T ss_pred CC-CCCCCCCCCc--CCchhHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHHHHHHHHHHhCC---------cccc
Confidence 99 999997 432 3344556666667666666554444 689999999999998877765543 3799
Q ss_pred eEEccCCCCCc
Q 012362 194 GVALGDSWISP 204 (465)
Q Consensus 194 Gi~IGNg~~~p 204 (465)
|+++-+|++..
T Consensus 134 ~~vLssP~~~l 144 (298)
T COG2267 134 GLVLSSPALGL 144 (298)
T ss_pred EEEEECccccC
Confidence 99998888765
No 52
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.00 E-value=0.0014 Score=66.19 Aligned_cols=63 Identities=10% Similarity=-0.007 Sum_probs=50.8
Q ss_pred CCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEc-CcccccCCcChH
Q 012362 364 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWIL-GAGHFVPVDQPC 442 (465)
Q Consensus 364 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~-~AGHmvP~DqP~ 442 (465)
.++||++.|+.|.++|....+...+.+.= .. -..+|+.|. +|||+++.++|+
T Consensus 288 ~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~-----------------~~----------~~v~~~~i~~~~GH~~~le~p~ 340 (351)
T TIGR01392 288 KAPFLVVSITSDWLFPPAESRELAKALPA-----------------AG----------LRVTYVEIESPYGHDAFLVETD 340 (351)
T ss_pred CCCEEEEEeCCccccCHHHHHHHHHHHhh-----------------cC----------CceEEEEeCCCCCcchhhcCHH
Confidence 68999999999999999888887777640 00 023555664 899999999999
Q ss_pred HHHHHHHHHhc
Q 012362 443 IALNMLAAMTD 453 (465)
Q Consensus 443 ~a~~mi~~fl~ 453 (465)
...+.|.+|++
T Consensus 341 ~~~~~l~~FL~ 351 (351)
T TIGR01392 341 QVEELIRGFLR 351 (351)
T ss_pred HHHHHHHHHhC
Confidence 99999999985
No 53
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=97.93 E-value=0.0003 Score=68.51 Aligned_cols=108 Identities=18% Similarity=0.139 Sum_probs=69.5
Q ss_pred CEEEEECCCCCccccccccccccCCCcccCCCCCCchhc-cccceeecCCCccccccccCCCCcccChHHHHHHHHHHHH
Q 012362 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (465)
Q Consensus 68 pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~-~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~ 146 (465)
|-+|.++||++...-..-.+.. --..+.+ -.+++-+|.| |.|.|... ..+.++..+|+..+++
T Consensus 27 ~~vv~i~gg~~~~~g~~~~~~~----------la~~l~~~G~~v~~~Dl~-G~G~S~~~-----~~~~~~~~~d~~~~~~ 90 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSHRQFVL----------LARRLAEAGFPVLRFDYR-GMGDSEGE-----NLGFEGIDADIAAAID 90 (274)
T ss_pred CeEEEEeCCccccCCchhHHHH----------HHHHHHHCCCEEEEeCCC-CCCCCCCC-----CCCHHHHHHHHHHHHH
Confidence 6788889999754210000000 0113333 3799999999 99988532 1244566778888887
Q ss_pred HHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCC
Q 012362 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (465)
Q Consensus 147 ~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~ 203 (465)
.+-+..|.+ .+++++|+|.||..+-.+|.. .-.++|+++.||++.
T Consensus 91 ~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~----------~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 91 AFREAAPHL--RRIVAWGLCDAASAALLYAPA----------DLRVAGLVLLNPWVR 135 (274)
T ss_pred HHHhhCCCC--CcEEEEEECHHHHHHHHHhhh----------CCCccEEEEECCccC
Confidence 665555543 469999999999765555421 016999999998764
No 54
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.88 E-value=4e-05 Score=71.26 Aligned_cols=56 Identities=20% Similarity=0.280 Sum_probs=47.7
Q ss_pred cCCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccCCcChH
Q 012362 363 KGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVDQPC 442 (465)
Q Consensus 363 ~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~DqP~ 442 (465)
..+++|+++|+.|.++|........+.+. +..++++.++||....+.|+
T Consensus 174 i~~p~l~i~~~~D~~~p~~~~~~~~~~~~-------------------------------~~~~~~~~~~GH~~~~~~~~ 222 (230)
T PF00561_consen 174 IKVPTLIIWGEDDPLVPPESSEQLAKLIP-------------------------------NSQLVLIEGSGHFAFLEGPD 222 (230)
T ss_dssp TTSEEEEEEETTCSSSHHHHHHHHHHHST-------------------------------TEEEEEETTCCSTHHHHSHH
T ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHhcC-------------------------------CCEEEECCCCChHHHhcCHH
Confidence 47999999999999999988887555543 46678899999999999999
Q ss_pred HHHHHHH
Q 012362 443 IALNMLA 449 (465)
Q Consensus 443 ~a~~mi~ 449 (465)
...++|.
T Consensus 223 ~~~~~i~ 229 (230)
T PF00561_consen 223 EFNEIII 229 (230)
T ss_dssp HHHHHHH
T ss_pred hhhhhhc
Confidence 9998875
No 55
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.80 E-value=9.9e-05 Score=73.89 Aligned_cols=135 Identities=21% Similarity=0.349 Sum_probs=82.1
Q ss_pred eEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccccccccCC
Q 012362 48 HMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDN 127 (465)
Q Consensus 48 ~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~ 127 (465)
.-.||+++++++ .+|++| |+||++||| |.+.+.=|+++..-.+-+..-+...+|.+|-..-. | ...+
T Consensus 105 ~~s~Wlvk~P~~-~~pk~D-pVlIYlHGG--------GY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~--~-~~~~ 171 (374)
T PF10340_consen 105 SQSYWLVKAPNR-FKPKSD-PVLIYLHGG--------GYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTS--S-DEHG 171 (374)
T ss_pred cceEEEEeCCcc-cCCCCC-cEEEEEcCC--------eeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccc--c-ccCC
Confidence 567999996432 356555 999999998 56677777775321111222223489999976443 0 0011
Q ss_pred CCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCccc
Q 012362 128 SSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (465)
Q Consensus 128 ~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~~ 206 (465)
..+++=.. ++.+..+...+.. -.+++.|+|+|-||+.+-.+..++.+.++ ...+ |++++-.||+.+..
T Consensus 172 ~~yPtQL~----qlv~~Y~~Lv~~~---G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~---~~~P-k~~iLISPWv~l~~ 239 (374)
T PF10340_consen 172 HKYPTQLR----QLVATYDYLVESE---GNKNIILMGDSAGGNLALSFLQYLKKPNK---LPYP-KSAILISPWVNLVP 239 (374)
T ss_pred CcCchHHH----HHHHHHHHHHhcc---CCCeEEEEecCccHHHHHHHHHHHhhcCC---CCCC-ceeEEECCCcCCcC
Confidence 12232222 2333333333222 24689999999999999999888755322 1222 78899999999863
No 56
>PLN02872 triacylglycerol lipase
Probab=97.67 E-value=0.0022 Score=65.76 Aligned_cols=127 Identities=17% Similarity=0.065 Sum_probs=72.0
Q ss_pred CCCceeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchh-ccccce
Q 012362 33 DASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLL 111 (465)
Q Consensus 33 ~~~~~sGyv~v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~-~~~n~l 111 (465)
+++.+.=+|+..++-.|-.+.+........+ ..+|.||.+||..++|..+ . -++|.+. -.+-.. +-..+.
T Consensus 41 gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~-~~~~~Vll~HGl~~ss~~w-~---~~~~~~s----la~~La~~GydV~ 111 (395)
T PLN02872 41 GYSCTEHTIQTKDGYLLALQRVSSRNPRLGS-QRGPPVLLQHGLFMAGDAW-F---LNSPEQS----LGFILADHGFDVW 111 (395)
T ss_pred CCCceEEEEECCCCcEEEEEEcCCCCCCCCC-CCCCeEEEeCcccccccce-e---ecCcccc----hHHHHHhCCCCcc
Confidence 4445555566655544444444432110112 2248999999998888763 2 1122110 001122 235777
Q ss_pred eecCCCccccccccCC-----CC-cccChHHHH-HHHHHHHHHHHHhCcccCCCCEEEEecccccchHH
Q 012362 112 FVDNPVGTGYSYVEDN-----SS-FVKNDVEAA-NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAA 173 (465)
Q Consensus 112 yiDqPvGvGfSy~~~~-----~~-~~~s~~~~A-~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP 173 (465)
-.|.. |.|+|+.... .. ...+-++.| .|+-++++...+.. ..++++.|+|.||..+-
T Consensus 112 l~n~R-G~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~----~~~v~~VGhS~Gg~~~~ 175 (395)
T PLN02872 112 VGNVR-GTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT----NSKIFIVGHSQGTIMSL 175 (395)
T ss_pred ccccc-ccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc----CCceEEEEECHHHHHHH
Confidence 78877 8888865321 11 123555667 78888887665432 36899999999997654
No 57
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=97.65 E-value=0.00039 Score=64.79 Aligned_cols=90 Identities=13% Similarity=0.109 Sum_probs=60.6
Q ss_pred ccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHc
Q 012362 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA 185 (465)
Q Consensus 106 ~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~ 185 (465)
+=..|+.+|.+.+.||+..-........-....+|+..+++...++. ..-...+.|+|.||||+.+-.++.+-
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~~------ 85 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQH------ 85 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHHT------
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhccc------
Confidence 55689999999878777642221122334566788888888665544 44457899999999999888876521
Q ss_pred CcceeeeeeEEccCCCCCcc
Q 012362 186 GKLKLKLGGVALGDSWISPE 205 (465)
Q Consensus 186 ~~~~inLkGi~IGNg~~~p~ 205 (465)
.-.++.++.++|.+|+.
T Consensus 86 ---~~~f~a~v~~~g~~d~~ 102 (213)
T PF00326_consen 86 ---PDRFKAAVAGAGVSDLF 102 (213)
T ss_dssp ---CCGSSEEEEESE-SSTT
T ss_pred ---ceeeeeeeccceecchh
Confidence 11478899999988874
No 58
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=97.59 E-value=0.014 Score=59.72 Aligned_cols=66 Identities=15% Similarity=0.126 Sum_probs=53.6
Q ss_pred hcCCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcC-cccccCCcC
Q 012362 362 AKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILG-AGHFVPVDQ 440 (465)
Q Consensus 362 ~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~-AGHmvP~Dq 440 (465)
.-..|||++.|+.|.++|..-.++..+.+. .. ..+.++.+|.+ +||+++.++
T Consensus 321 ~I~~PtLvI~G~~D~l~p~~~~~~la~~lp------------------~~---------~~~a~l~~I~s~~GH~~~le~ 373 (389)
T PRK06765 321 NIEANVLMIPCKQDLLQPPRYNYKMVDILQ------------------KQ---------GKYAEVYEIESINGHMAGVFD 373 (389)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHHhh------------------hc---------CCCeEEEEECCCCCcchhhcC
Confidence 336899999999999999877776666653 00 02577888986 999999999
Q ss_pred hHHHHHHHHHHhcC
Q 012362 441 PCIALNMLAAMTDS 454 (465)
Q Consensus 441 P~~a~~mi~~fl~~ 454 (465)
|+...+.|.+|+..
T Consensus 374 p~~~~~~I~~FL~~ 387 (389)
T PRK06765 374 IHLFEKKIYEFLNR 387 (389)
T ss_pred HHHHHHHHHHHHcc
Confidence 99999999999975
No 59
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.49 E-value=0.00054 Score=66.32 Aligned_cols=127 Identities=12% Similarity=0.044 Sum_probs=76.9
Q ss_pred ceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchh-ccccceeecCCCcccccccc
Q 012362 47 AHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPVGTGYSYVE 125 (465)
Q Consensus 47 ~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~-~~~n~lyiDqPvGvGfSy~~ 125 (465)
.++|.|+++.. .+ +.+|+||.+||-.+-..-..-.+. .--..+. +-.+++-+|.| |.|.|-..
T Consensus 10 g~~~~~~~~p~----~~-~~~~~VlllHG~g~~~~~~~~~~~----------~la~~La~~Gy~Vl~~Dl~-G~G~S~g~ 73 (266)
T TIGR03101 10 GFRFCLYHPPV----AV-GPRGVVIYLPPFAEEMNKSRRMVA----------LQARAFAAGGFGVLQIDLY-GCGDSAGD 73 (266)
T ss_pred CcEEEEEecCC----CC-CCceEEEEECCCcccccchhHHHH----------HHHHHHHHCCCEEEEECCC-CCCCCCCc
Confidence 47899999742 12 124899999985331110000000 0001232 34799999999 99988543
Q ss_pred CCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCcc
Q 012362 126 DNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (465)
Q Consensus 126 ~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~ 205 (465)
.. ..+.....+|+..+++ |++... ..+++|+|+|.||..+..+|.+.. -.++++++-+|.++..
T Consensus 74 ~~---~~~~~~~~~Dv~~ai~-~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p---------~~v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 74 FA---AARWDVWKEDVAAAYR-WLIEQG---HPPVTLWGLRLGALLALDAANPLA---------AKCNRLVLWQPVVSGK 137 (266)
T ss_pred cc---cCCHHHHHHHHHHHHH-HHHhcC---CCCEEEEEECHHHHHHHHHHHhCc---------cccceEEEeccccchH
Confidence 21 1244455666655543 444332 468999999999999888775431 2578899888877653
No 60
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.47 E-value=0.00035 Score=68.02 Aligned_cols=104 Identities=15% Similarity=0.050 Sum_probs=67.7
Q ss_pred CCCEEEEECCCCCccccccccccccCCCcccCCCCCCchh-ccccceeecCCCccccccccCCCCcccChHHHHHHHHHH
Q 012362 66 PWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144 (465)
Q Consensus 66 ~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~-~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~f 144 (465)
..|.||++||..+.++.+ ..+. .... +-.+++-+|.| |.|.|..... ...+.++.++++.++
T Consensus 17 ~~p~vvliHG~~~~~~~w-~~~~-------------~~L~~~g~~vi~~dl~-g~G~s~~~~~--~~~~~~~~~~~l~~~ 79 (273)
T PLN02211 17 QPPHFVLIHGISGGSWCW-YKIR-------------CLMENSGYKVTCIDLK-SAGIDQSDAD--SVTTFDEYNKPLIDF 79 (273)
T ss_pred CCCeEEEECCCCCCcCcH-HHHH-------------HHHHhCCCEEEEeccc-CCCCCCCCcc--cCCCHHHHHHHHHHH
Confidence 359999999987766552 1110 0111 24799999999 9998743211 124666677766666
Q ss_pred HHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCC
Q 012362 145 LMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (465)
Q Consensus 145 L~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~ 201 (465)
++. ... .++++|.|+||||..+..++....+ .++++++.++.
T Consensus 80 i~~----l~~--~~~v~lvGhS~GG~v~~~~a~~~p~---------~v~~lv~~~~~ 121 (273)
T PLN02211 80 LSS----LPE--NEKVILVGHSAGGLSVTQAIHRFPK---------KICLAVYVAAT 121 (273)
T ss_pred HHh----cCC--CCCEEEEEECchHHHHHHHHHhChh---------heeEEEEeccc
Confidence 653 221 4799999999999987777754322 57788876554
No 61
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.28 E-value=0.00096 Score=68.97 Aligned_cols=79 Identities=15% Similarity=0.216 Sum_probs=54.0
Q ss_pred ccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCc
Q 012362 108 ADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGK 187 (465)
Q Consensus 108 ~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~ 187 (465)
.++|-+|.| |+|.|-... ...+... +...+..++...|.....++.|+|.|+||.+++.+|..-.
T Consensus 223 y~vl~~D~p-G~G~s~~~~---~~~d~~~----~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p------- 287 (414)
T PRK05077 223 IAMLTIDMP-SVGFSSKWK---LTQDSSL----LHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEP------- 287 (414)
T ss_pred CEEEEECCC-CCCCCCCCC---ccccHHH----HHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCC-------
Confidence 889999999 999985321 1111111 2234445666667665678999999999999998875421
Q ss_pred ceeeeeeEEccCCCCC
Q 012362 188 LKLKLGGVALGDSWIS 203 (465)
Q Consensus 188 ~~inLkGi~IGNg~~~ 203 (465)
-.++++++.+|.++
T Consensus 288 --~ri~a~V~~~~~~~ 301 (414)
T PRK05077 288 --PRLKAVACLGPVVH 301 (414)
T ss_pred --cCceEEEEECCccc
Confidence 15888888776654
No 62
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.23 E-value=0.00096 Score=62.26 Aligned_cols=110 Identities=15% Similarity=0.158 Sum_probs=59.3
Q ss_pred CCCEEEEECCCCCccccccccccccCCCcccCCCCCCchhc-----cccceeecCCCccccccccC---CCCcccChHHH
Q 012362 66 PWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-----KADLLFVDNPVGTGYSYVED---NSSFVKNDVEA 137 (465)
Q Consensus 66 ~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~-----~~n~lyiDqPvGvGfSy~~~---~~~~~~s~~~~ 137 (465)
..|+||+|||+++.++. +. ..+.|.+ -+.+|..|.| |.|.+...- ...........
T Consensus 12 ~~P~vv~lHG~~~~~~~-~~--------------~~~~~~~~a~~~g~~Vv~Pd~~-g~~~~~~~~~~~~~~~~~~~~~~ 75 (212)
T TIGR01840 12 PRALVLALHGCGQTASA-YV--------------IDWGWKAAADRYGFVLVAPEQT-SYNSSNNCWDWFFTHHRARGTGE 75 (212)
T ss_pred CCCEEEEeCCCCCCHHH-Hh--------------hhcChHHHHHhCCeEEEecCCc-CccccCCCCCCCCccccCCCCcc
Confidence 35999999999987664 21 0112332 3578888887 544321100 00000000112
Q ss_pred HHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCC
Q 012362 138 ANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (465)
Q Consensus 138 A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~ 201 (465)
..++..+++...++++ ....+++|+|+|.||..+-.++.+-.+ .+.++++..|.
T Consensus 76 ~~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a~~~p~---------~~~~~~~~~g~ 129 (212)
T TIGR01840 76 VESLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLGCTYPD---------VFAGGASNAGL 129 (212)
T ss_pred HHHHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHHHhCch---------hheEEEeecCC
Confidence 3334444444444442 334689999999999987777644211 36676665544
No 63
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.95 E-value=0.014 Score=57.17 Aligned_cols=53 Identities=25% Similarity=0.275 Sum_probs=39.5
Q ss_pred cceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEeccccc
Q 012362 109 DLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGG 169 (465)
Q Consensus 109 n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG 169 (465)
.++=||.- ..|+|-. ..+.+-+..|+|+..|+..+-. .++..+..|.|+|.||
T Consensus 82 ~v~~vd~R-nHG~Sp~----~~~h~~~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 82 DVYAVDVR-NHGSSPK----ITVHNYEAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred ceEEEecc-cCCCCcc----ccccCHHHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 56667766 7787743 3456788889998888876532 2457899999999999
No 64
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.75 E-value=0.0017 Score=63.24 Aligned_cols=107 Identities=21% Similarity=0.262 Sum_probs=66.7
Q ss_pred CCEEEEECCCCCcc-ccccccccccCCCcccCCCCCCchh--ccccceeecCCCccccccccCCCCcccChHHHHHHHHH
Q 012362 67 WPIILWLQGGPGAS-GVGIGNFEEVGPFDTYLKPRNSTWL--KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTT 143 (465)
Q Consensus 67 ~pl~lwl~GGPG~s-S~~~g~f~E~GP~~~~l~~~~~sw~--~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~ 143 (465)
.|++|++||-.|.. ..+.-.+ ...|. ...|+|.||-+.+..-.|. ....+...+++++..
T Consensus 36 ~p~vilIHG~~~~~~~~~~~~l-------------~~~ll~~~~~nVi~vD~~~~~~~~y~----~a~~~~~~v~~~la~ 98 (275)
T cd00707 36 RPTRFIIHGWTSSGEESWISDL-------------RKAYLSRGDYNVIVVDWGRGANPNYP----QAVNNTRVVGAELAK 98 (275)
T ss_pred CCcEEEEcCCCCCCCCcHHHHH-------------HHHHHhcCCCEEEEEECccccccChH----HHHHhHHHHHHHHHH
Confidence 48999999977654 2211000 01122 3589999998844211121 112345566777777
Q ss_pred HHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCC
Q 012362 144 LLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (465)
Q Consensus 144 fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg 200 (465)
+|+...+.. .+...+++|+|+|.||+.+-.+|.+..+ +|+.|+.-+|
T Consensus 99 ~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~---------~v~~iv~LDP 145 (275)
T cd00707 99 FLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG---------KLGRITGLDP 145 (275)
T ss_pred HHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC---------ccceeEEecC
Confidence 777665542 2334689999999999998888865432 5778877554
No 65
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.74 E-value=0.005 Score=58.63 Aligned_cols=106 Identities=26% Similarity=0.440 Sum_probs=70.3
Q ss_pred CCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHH
Q 012362 64 SKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTT 143 (465)
Q Consensus 64 ~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~ 143 (465)
++.-|+++.+||| |.|.|.++.|. -.+. . .-..-++-+|.- |.|-+-.++.++ -+.+..++|+..
T Consensus 71 ~t~gpil~l~HG~-G~S~LSfA~~a------~el~--s---~~~~r~~a~DlR-gHGeTk~~~e~d--lS~eT~~KD~~~ 135 (343)
T KOG2564|consen 71 ATEGPILLLLHGG-GSSALSFAIFA------SELK--S---KIRCRCLALDLR-GHGETKVENEDD--LSLETMSKDFGA 135 (343)
T ss_pred CCCccEEEEeecC-cccchhHHHHH------HHHH--h---hcceeEEEeecc-ccCccccCChhh--cCHHHHHHHHHH
Confidence 3445999999965 66665333321 0000 0 001123779966 999998776543 688899999999
Q ss_pred HHHHHHHhCcccCCCCEEEEecccccchHHHHHHH-HHHHHHcCcceeeeeeEEc
Q 012362 144 LLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA-AVKAIEAGKLKLKLGGVAL 197 (465)
Q Consensus 144 fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~-i~~~~~~~~~~inLkGi~I 197 (465)
.++.+|..-| .++.|.|||.||-.+-+.|.. .+ -+|-|+.+
T Consensus 136 ~i~~~fge~~----~~iilVGHSmGGaIav~~a~~k~l---------psl~Gl~v 177 (343)
T KOG2564|consen 136 VIKELFGELP----PQIILVGHSMGGAIAVHTAASKTL---------PSLAGLVV 177 (343)
T ss_pred HHHHHhccCC----CceEEEeccccchhhhhhhhhhhc---------hhhhceEE
Confidence 9999986544 369999999999988665532 11 15778877
No 66
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.66 E-value=0.0047 Score=57.10 Aligned_cols=104 Identities=27% Similarity=0.295 Sum_probs=63.8
Q ss_pred CEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHH
Q 012362 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (465)
Q Consensus 68 pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~ 147 (465)
|.++++||+|+++..+ ....+. +..... + .+++.+|+| |.|.|. .. ..+....+.++..+++
T Consensus 22 ~~i~~~hg~~~~~~~~-~~~~~~------~~~~~~---~-~~~~~~d~~-g~g~s~-~~----~~~~~~~~~~~~~~~~- 83 (282)
T COG0596 22 PPLVLLHGFPGSSSVW-RPVFKV------LPALAA---R-YRVIAPDLR-GHGRSD-PA----GYSLSAYADDLAALLD- 83 (282)
T ss_pred CeEEEeCCCCCchhhh-HHHHHH------hhcccc---c-eEEEEeccc-CCCCCC-cc----cccHHHHHHHHHHHHH-
Confidence 7999999999999874 220000 000000 1 899999999 999996 10 1122222555544444
Q ss_pred HHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCc
Q 012362 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (465)
Q Consensus 148 F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p 204 (465)
... ..++++.|+|+||..+-.++.+..+ .++++++-++...+
T Consensus 84 ---~~~---~~~~~l~G~S~Gg~~~~~~~~~~p~---------~~~~~v~~~~~~~~ 125 (282)
T COG0596 84 ---ALG---LEKVVLVGHSMGGAVALALALRHPD---------RVRGLVLIGPAPPP 125 (282)
T ss_pred ---HhC---CCceEEEEecccHHHHHHHHHhcch---------hhheeeEecCCCCc
Confidence 222 2349999999998877777655433 56777776655543
No 67
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=96.66 E-value=0.012 Score=57.20 Aligned_cols=41 Identities=22% Similarity=0.250 Sum_probs=30.3
Q ss_pred cCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCc
Q 012362 155 LQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (465)
Q Consensus 155 ~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p 204 (465)
....+++|+|+|+||+.+-.++.+-.+ .+++++..+|..++
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~~p~---------~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALKNPD---------RFKSVSAFAPIVAP 175 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHhCcc---------cceEEEEECCccCc
Confidence 334689999999999987777754221 46788888887765
No 68
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.64 E-value=0.019 Score=55.37 Aligned_cols=161 Identities=19% Similarity=0.241 Sum_probs=88.0
Q ss_pred hhHHHHHHHHHHhhhcCCcccccccCCCCCCceeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCcccccc
Q 012362 5 CGFVATLLFLVSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGI 84 (465)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGyv~v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~ 84 (465)
+.++.+|+-|.++.++++..+.... +...-+-+.+++. ..=||+|.-. ..|++ +||||.|||+-|..+- .
T Consensus 8 ~R~~~~l~~la~~~~~~sg~~~~a~----~~~~~~s~~~~g~-~r~y~l~vP~---g~~~~-apLvv~LHG~~~sgag-~ 77 (312)
T COG3509 8 ARLVLLLAVLAVAAAACSGHAALAR----FGSSVASFDVNGL-KRSYRLYVPP---GLPSG-APLVVVLHGSGGSGAG-Q 77 (312)
T ss_pred HHHHHHHHHHHHhhcccchhhhhhh----ccCCccccccCCC-ccceEEEcCC---CCCCC-CCEEEEEecCCCChHH-h
Confidence 4445555555666666655554322 2333344555543 6677888643 34544 4999999999887764 2
Q ss_pred ccccccCCCcccCCCCCCchhcccc-----ceeecC------CCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCc
Q 012362 85 GNFEEVGPFDTYLKPRNSTWLKKAD-----LLFVDN------PVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNE 153 (465)
Q Consensus 85 g~f~E~GP~~~~l~~~~~sw~~~~n-----~lyiDq------PvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP 153 (465)
- +-..|++.|. |+|-|+ |-+.|-++.... .....+++ ..+.+.+.....+|-
T Consensus 78 ~--------------~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~--~~~g~ddV-gflr~lva~l~~~~g 140 (312)
T COG3509 78 L--------------HGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPAD--RRRGVDDV-GFLRALVAKLVNEYG 140 (312)
T ss_pred h--------------cccchhhhhcccCcEEECcCccccccCCCcccccCCccc--ccCCccHH-HHHHHHHHHHHHhcC
Confidence 1 3345555543 455441 445555543221 11122222 223333333333332
Q ss_pred ccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCC
Q 012362 154 ILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (465)
Q Consensus 154 ~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~ 202 (465)
.....+||+|=|=||.++-.++..-.+ -+.++++-.|..
T Consensus 141 -idp~RVyvtGlS~GG~Ma~~lac~~p~---------~faa~A~VAg~~ 179 (312)
T COG3509 141 -IDPARVYVTGLSNGGRMANRLACEYPD---------IFAAIAPVAGLL 179 (312)
T ss_pred -cCcceEEEEeeCcHHHHHHHHHhcCcc---------cccceeeeeccc
Confidence 234589999999999998888765332 356666655544
No 69
>PLN02442 S-formylglutathione hydrolase
Probab=96.58 E-value=0.01 Score=58.07 Aligned_cols=56 Identities=29% Similarity=0.322 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCc
Q 012362 137 AANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (465)
Q Consensus 137 ~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p 204 (465)
..+++-..+..++.. ....+++|+|.|+||+-+-.++.+-.+ .+++++..+|..++
T Consensus 125 ~~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~~p~---------~~~~~~~~~~~~~~ 180 (283)
T PLN02442 125 VVKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLKNPD---------KYKSVSAFAPIANP 180 (283)
T ss_pred HHHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHhCch---------hEEEEEEECCccCc
Confidence 345555556665543 234679999999999877776654222 47888888888765
No 70
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.57 E-value=0.014 Score=56.37 Aligned_cols=119 Identities=17% Similarity=0.202 Sum_probs=79.9
Q ss_pred eeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchh-ccccceeecCCC
Q 012362 39 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPV 117 (465)
Q Consensus 39 Gyv~v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~-~~~n~lyiDqPv 117 (465)
-|+.-..+..+|.-.+... +.+ +.+-+|+.+||.-+-||-.+ .+.= -..+ .-.-+--+|++
T Consensus 30 ~~~~n~rG~~lft~~W~p~---~~~-~pr~lv~~~HG~g~~~s~~~---~~~a----------~~l~~~g~~v~a~D~~- 91 (313)
T KOG1455|consen 30 SFFTNPRGAKLFTQSWLPL---SGT-EPRGLVFLCHGYGEHSSWRY---QSTA----------KRLAKSGFAVYAIDYE- 91 (313)
T ss_pred eeEEcCCCCEeEEEecccC---CCC-CCceEEEEEcCCcccchhhH---HHHH----------HHHHhCCCeEEEeecc-
Confidence 3554444567887777532 112 33579999999777665312 1000 0011 12346679999
Q ss_pred ccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHH
Q 012362 118 GTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (465)
Q Consensus 118 GvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~ 178 (465)
|.|.|-+- ..++.+-+.+.+|...|+..+- ..+++++.|.|++|||.||--+..++.+
T Consensus 92 GhG~SdGl--~~yi~~~d~~v~D~~~~~~~i~-~~~e~~~lp~FL~GeSMGGAV~Ll~~~k 149 (313)
T KOG1455|consen 92 GHGRSDGL--HAYVPSFDLVVDDVISFFDSIK-EREENKGLPRFLFGESMGGAVALLIALK 149 (313)
T ss_pred CCCcCCCC--cccCCcHHHHHHHHHHHHHHHh-hccccCCCCeeeeecCcchHHHHHHHhh
Confidence 99999753 4678899999999988887654 4567889999999999999877766643
No 71
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=96.47 E-value=0.01 Score=61.36 Aligned_cols=80 Identities=13% Similarity=0.069 Sum_probs=52.8
Q ss_pred cccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcC
Q 012362 107 KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAG 186 (465)
Q Consensus 107 ~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~ 186 (465)
.+|+|-+|-| |-|-|.... ...+...+|.++.++++...+.. .+.-.+++|.|+|.|||.+-.++.+..
T Consensus 73 d~nVI~VDw~-g~g~s~y~~---a~~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~p------ 141 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPT---SAAYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLTK------ 141 (442)
T ss_pred CCEEEEEECC-CcCCCCCcc---ccccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhCC------
Confidence 4799999999 555442111 12345678888888887554333 244578999999999998887775431
Q ss_pred cceeeeeeEEccCC
Q 012362 187 KLKLKLGGVALGDS 200 (465)
Q Consensus 187 ~~~inLkGi~IGNg 200 (465)
-.|..|++-||
T Consensus 142 ---~rV~rItgLDP 152 (442)
T TIGR03230 142 ---HKVNRITGLDP 152 (442)
T ss_pred ---cceeEEEEEcC
Confidence 14666666554
No 72
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.33 E-value=0.03 Score=55.91 Aligned_cols=144 Identities=18% Similarity=0.234 Sum_probs=88.1
Q ss_pred eeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchh-ccccceeecCCC
Q 012362 39 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPV 117 (465)
Q Consensus 39 Gyv~v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~-~~~n~lyiDqPv 117 (465)
.=|.+.+...++.+.|..+. ..+++.+|+|||+|||--|-+.-. . | ....-.++. +..|.+-|
T Consensus 64 ~dv~~~~~~~l~vRly~P~~--~~~~~~~p~lvyfHGGGf~~~S~~--~----~----~y~~~~~~~a~~~~~vvv---- 127 (336)
T KOG1515|consen 64 KDVTIDPFTNLPVRLYRPTS--SSSETKLPVLVYFHGGGFCLGSAN--S----P----AYDSFCTRLAAELNCVVV---- 127 (336)
T ss_pred eeeEecCCCCeEEEEEcCCC--CCcccCceEEEEEeCCccEeCCCC--C----c----hhHHHHHHHHHHcCeEEE----
Confidence 44455556789999998653 223134599999999998876410 0 0 000112333 55666643
Q ss_pred ccccccccCCCCcccChHHHHHHHHHHHHH-HHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEE
Q 012362 118 GTGYSYVEDNSSFVKNDVEAANDLTTLLME-LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVA 196 (465)
Q Consensus 118 GvGfSy~~~~~~~~~s~~~~A~d~~~fL~~-F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~ 196 (465)
.|+|--+- +..++..-++.-..+..++++ |....-+.+ .++|+|.|-||..+-.+|.+..+.. ...+.|+|.+
T Consensus 128 SVdYRLAP-Eh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~---~~~~ki~g~i 201 (336)
T KOG1515|consen 128 SVDYRLAP-EHPFPAAYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK---LSKPKIKGQI 201 (336)
T ss_pred ecCcccCC-CCCCCccchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc---CCCcceEEEE
Confidence 34444332 233444444444445555555 666555542 3999999999999999998887632 2457899999
Q ss_pred ccCCCCCc
Q 012362 197 LGDSWISP 204 (465)
Q Consensus 197 IGNg~~~p 204 (465)
+--|+...
T Consensus 202 li~P~~~~ 209 (336)
T KOG1515|consen 202 LIYPFFQG 209 (336)
T ss_pred EEecccCC
Confidence 96665543
No 73
>PRK13604 luxD acyl transferase; Provisional
Probab=96.20 E-value=0.25 Score=48.67 Aligned_cols=128 Identities=15% Similarity=0.060 Sum_probs=70.3
Q ss_pred EeCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCcccc
Q 012362 42 EVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGY 121 (465)
Q Consensus 42 ~v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGf 121 (465)
.++++..|.=|+.+.++ .++.+ .|+||..+ |.|+....+- ..-.+=+.+=.++|-.|.--|.|-
T Consensus 15 ~~~dG~~L~Gwl~~P~~--~~~~~-~~~vIi~H-Gf~~~~~~~~------------~~A~~La~~G~~vLrfD~rg~~Ge 78 (307)
T PRK13604 15 CLENGQSIRVWETLPKE--NSPKK-NNTILIAS-GFARRMDHFA------------GLAEYLSSNGFHVIRYDSLHHVGL 78 (307)
T ss_pred EcCCCCEEEEEEEcCcc--cCCCC-CCEEEEeC-CCCCChHHHH------------HHHHHHHHCCCEEEEecCCCCCCC
Confidence 33444566666665432 12323 38888877 4555421010 001233567789999998756788
Q ss_pred ccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCC
Q 012362 122 SYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (465)
Q Consensus 122 Sy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~ 201 (465)
|-++-.+ ...+. ...|+..++. |++... ..++.|.|+|.||.-+...|. ..+++++++..|+
T Consensus 79 S~G~~~~-~t~s~--g~~Dl~aaid-~lk~~~---~~~I~LiG~SmGgava~~~A~-----------~~~v~~lI~~sp~ 140 (307)
T PRK13604 79 SSGTIDE-FTMSI--GKNSLLTVVD-WLNTRG---INNLGLIAASLSARIAYEVIN-----------EIDLSFLITAVGV 140 (307)
T ss_pred CCCcccc-Ccccc--cHHHHHHHHH-HHHhcC---CCceEEEEECHHHHHHHHHhc-----------CCCCCEEEEcCCc
Confidence 8443211 11111 2455543333 333321 357999999999987543332 1258888887776
Q ss_pred CC
Q 012362 202 IS 203 (465)
Q Consensus 202 ~~ 203 (465)
.+
T Consensus 141 ~~ 142 (307)
T PRK13604 141 VN 142 (307)
T ss_pred cc
Confidence 65
No 74
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=95.95 E-value=0.021 Score=53.41 Aligned_cols=102 Identities=17% Similarity=0.210 Sum_probs=69.8
Q ss_pred EEEEECCCCCccccccccccccCCCcccCCCCCCchhc-cccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHH
Q 012362 69 IILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (465)
Q Consensus 69 l~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~-~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~ 147 (465)
.|+++++|=|.++. +--|. ....+ ..++..|+.| |-+ .......+-++.|++..+.++.
T Consensus 2 ~lf~~p~~gG~~~~-y~~la-------------~~l~~~~~~v~~i~~~-~~~-----~~~~~~~si~~la~~y~~~I~~ 61 (229)
T PF00975_consen 2 PLFCFPPAGGSASS-YRPLA-------------RALPDDVIGVYGIEYP-GRG-----DDEPPPDSIEELASRYAEAIRA 61 (229)
T ss_dssp EEEEESSTTCSGGG-GHHHH-------------HHHTTTEEEEEEECST-TSC-----TTSHEESSHHHHHHHHHHHHHH
T ss_pred eEEEEcCCccCHHH-HHHHH-------------HhCCCCeEEEEEEecC-CCC-----CCCCCCCCHHHHHHHHHHHhhh
Confidence 57899999897765 41110 11223 4778999988 555 1223467888899887777753
Q ss_pred HHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCC
Q 012362 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (465)
Q Consensus 148 F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~ 202 (465)
..|+ -|++|+|.|+||..+=.+|.++.+. | ...+.+++-++..
T Consensus 62 ---~~~~---gp~~L~G~S~Gg~lA~E~A~~Le~~---G---~~v~~l~liD~~~ 104 (229)
T PF00975_consen 62 ---RQPE---GPYVLAGWSFGGILAFEMARQLEEA---G---EEVSRLILIDSPP 104 (229)
T ss_dssp ---HTSS---SSEEEEEETHHHHHHHHHHHHHHHT---T----SESEEEEESCSS
T ss_pred ---hCCC---CCeeehccCccHHHHHHHHHHHHHh---h---hccCceEEecCCC
Confidence 3443 3999999999999999999887653 1 3578888877543
No 75
>PRK10985 putative hydrolase; Provisional
Probab=95.76 E-value=0.11 Score=51.74 Aligned_cols=115 Identities=15% Similarity=0.108 Sum_probs=59.9
Q ss_pred eeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCcccccccc-ccccCCCcccCCCCCCchh-ccccceeecC
Q 012362 38 WGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGN-FEEVGPFDTYLKPRNSTWL-KKADLLFVDN 115 (465)
Q Consensus 38 sGyv~v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~-f~E~GP~~~~l~~~~~sw~-~~~n~lyiDq 115 (465)
.=.++..++..+.+++.+.. ..+ .++|+||.+||.+|.+...+.. +. .... +-.+++-+|.
T Consensus 33 ~~~~~~~dg~~~~l~w~~~~---~~~-~~~p~vll~HG~~g~~~~~~~~~~~-------------~~l~~~G~~v~~~d~ 95 (324)
T PRK10985 33 WQRLELPDGDFVDLAWSEDP---AQA-RHKPRLVLFHGLEGSFNSPYAHGLL-------------EAAQKRGWLGVVMHF 95 (324)
T ss_pred eeEEECCCCCEEEEecCCCC---ccC-CCCCEEEEeCCCCCCCcCHHHHHHH-------------HHHHHCCCEEEEEeC
Confidence 33456655555544444321 122 2359999999999876431100 00 0111 2346788898
Q ss_pred CCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHH
Q 012362 116 PVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (465)
Q Consensus 116 PvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia 176 (465)
+ |.|-|-......+... ..+|+..+++..-+.+| ..+++++|+|.||..+-..+
T Consensus 96 r-G~g~~~~~~~~~~~~~---~~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~ 149 (324)
T PRK10985 96 R-GCSGEPNRLHRIYHSG---ETEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLL 149 (324)
T ss_pred C-CCCCCccCCcceECCC---chHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHH
Confidence 7 7764422111111111 13444444443333444 46899999999998655444
No 76
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.62 E-value=0.045 Score=44.87 Aligned_cols=65 Identities=17% Similarity=0.134 Sum_probs=54.6
Q ss_pred CCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccCCcChHH
Q 012362 364 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVDQPCI 443 (465)
Q Consensus 364 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~DqP~~ 443 (465)
-.+||+.+|..|.++|+.+.++..+.|. +-..+++.++||-+-...-.-
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~-------------------------------~s~lvt~~g~gHg~~~~~s~C 82 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP-------------------------------GSRLVTVDGAGHGVYAGGSPC 82 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC-------------------------------CceEEEEeccCcceecCCChH
Confidence 3899999999999999999999999985 235689999999998655566
Q ss_pred HHHHHHHHhcCCCccc
Q 012362 444 ALNMLAAMTDSPASAS 459 (465)
Q Consensus 444 a~~mi~~fl~~~~~~~ 459 (465)
+.+++++|+.....|.
T Consensus 83 ~~~~v~~yl~~G~lP~ 98 (103)
T PF08386_consen 83 VDKAVDDYLLDGTLPA 98 (103)
T ss_pred HHHHHHHHHHcCCCCC
Confidence 7889999988776664
No 77
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=95.53 E-value=0.05 Score=58.45 Aligned_cols=132 Identities=16% Similarity=0.120 Sum_probs=80.1
Q ss_pred eCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchh-ccccceeecCCCcccc
Q 012362 43 VRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPVGTGY 121 (465)
Q Consensus 43 v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~-~~~n~lyiDqPvGvGf 121 (465)
.+++..|+...|.-. +. +..|+||.++|-...+.. .... + .....-|. +-+.++-+|.+ |.|.
T Consensus 3 ~~DG~~L~~~~~~P~----~~-~~~P~Il~~~gyg~~~~~-~~~~-~--------~~~~~~l~~~Gy~vv~~D~R-G~g~ 66 (550)
T TIGR00976 3 MRDGTRLAIDVYRPA----GG-GPVPVILSRTPYGKDAGL-RWGL-D--------KTEPAWFVAQGYAVVIQDTR-GRGA 66 (550)
T ss_pred CCCCCEEEEEEEecC----CC-CCCCEEEEecCCCCchhh-cccc-c--------cccHHHHHhCCcEEEEEecc-cccc
Confidence 344557777766521 22 235999999964433211 0000 0 00111233 46889999988 9999
Q ss_pred ccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCC
Q 012362 122 SYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (465)
Q Consensus 122 Sy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~ 201 (465)
|-+... ..+ ...++|+..+++ |+.+.|. .+.++.++|.||||..+-.+|..- .-.|++++..+++
T Consensus 67 S~g~~~---~~~-~~~~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~~---------~~~l~aiv~~~~~ 131 (550)
T TIGR00976 67 SEGEFD---LLG-SDEAADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAVTQLLAAVLQ---------PPALRAIAPQEGV 131 (550)
T ss_pred CCCceE---ecC-cccchHHHHHHH-HHHhCCC-CCCcEEEEEeChHHHHHHHHhccC---------CCceeEEeecCcc
Confidence 975421 112 456777777776 6666653 346899999999998766555321 1268999988887
Q ss_pred CCcc
Q 012362 202 ISPE 205 (465)
Q Consensus 202 ~~p~ 205 (465)
.|..
T Consensus 132 ~d~~ 135 (550)
T TIGR00976 132 WDLY 135 (550)
T ss_pred cchh
Confidence 7654
No 78
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=95.43 E-value=0.52 Score=50.23 Aligned_cols=83 Identities=8% Similarity=-0.001 Sum_probs=50.4
Q ss_pred ccceeecCCCccccccccCCCCcccCh-HHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcC
Q 012362 108 ADLLFVDNPVGTGYSYVEDNSSFVKND-VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAG 186 (465)
Q Consensus 108 ~n~lyiDqPvGvGfSy~~~~~~~~~s~-~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~ 186 (465)
..++-||-+ |.|.|... .+. +-+.+++.+++..+.+.. ...+++++|+|.||..+......+.....
T Consensus 221 f~V~~iDwr-gpg~s~~~------~~~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~~~-- 288 (532)
T TIGR01838 221 HTVFVISWR-NPDASQAD------KTFDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAARGD-- 288 (532)
T ss_pred cEEEEEECC-CCCccccc------CChhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHhCC--
Confidence 578889977 88877432 122 233344666666655443 25789999999999987653332222110
Q ss_pred cceeeeeeEEccCCCCCc
Q 012362 187 KLKLKLGGVALGDSWISP 204 (465)
Q Consensus 187 ~~~inLkGi~IGNg~~~p 204 (465)
.-.++++++-+..+|.
T Consensus 289 --~~rv~slvll~t~~Df 304 (532)
T TIGR01838 289 --DKRIKSATFFTTLLDF 304 (532)
T ss_pred --CCccceEEEEecCcCC
Confidence 1157888877766654
No 79
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=95.37 E-value=0.019 Score=58.43 Aligned_cols=82 Identities=18% Similarity=0.223 Sum_probs=53.5
Q ss_pred ccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHc
Q 012362 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA 185 (465)
Q Consensus 106 ~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~ 185 (465)
+-.+||=||-| |||+|.... . +. -.+.++..+..|+...|+.-...+.++|-|+||.|++-+|..=.
T Consensus 217 rGiA~LtvDmP-G~G~s~~~~---l--~~--D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~----- 283 (411)
T PF06500_consen 217 RGIAMLTVDMP-GQGESPKWP---L--TQ--DSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALED----- 283 (411)
T ss_dssp CT-EEEEE--T-TSGGGTTT----S---S---CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTT-----
T ss_pred CCCEEEEEccC-CCcccccCC---C--Cc--CHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcc-----
Confidence 44579999999 999985321 1 11 12346667777888889887889999999999999999885311
Q ss_pred CcceeeeeeEEccCCCCCc
Q 012362 186 GKLKLKLGGVALGDSWISP 204 (465)
Q Consensus 186 ~~~~inLkGi~IGNg~~~p 204 (465)
-.||+++.-.|.++.
T Consensus 284 ----~RlkavV~~Ga~vh~ 298 (411)
T PF06500_consen 284 ----PRLKAVVALGAPVHH 298 (411)
T ss_dssp ----TT-SEEEEES---SC
T ss_pred ----cceeeEeeeCchHhh
Confidence 168887765555543
No 80
>PRK10162 acetyl esterase; Provisional
Probab=94.94 E-value=0.069 Score=53.15 Aligned_cols=44 Identities=20% Similarity=0.030 Sum_probs=31.7
Q ss_pred CCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCC
Q 012362 157 KSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (465)
Q Consensus 157 ~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~ 203 (465)
..++.|+|+|.||+.+-.++....+. +.....++++++..|+++
T Consensus 153 ~~~i~l~G~SaGG~la~~~a~~~~~~---~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 153 MSRIGFAGDSAGAMLALASALWLRDK---QIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred hhHEEEEEECHHHHHHHHHHHHHHhc---CCCccChhheEEECCccC
Confidence 46799999999999998888665432 111235778888777665
No 81
>PLN00021 chlorophyllase
Probab=94.73 E-value=0.06 Score=53.47 Aligned_cols=111 Identities=17% Similarity=0.118 Sum_probs=63.8
Q ss_pred CCEEEEECCCCCccccccccccccCCCcccCCCCCCchhc-cccceeecCCCccccccccCCCCcccChHHHHHHHHHHH
Q 012362 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLL 145 (465)
Q Consensus 67 ~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~-~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL 145 (465)
.|+||++||+.+.+.. +.-+. ..+.+ -..++.+|.+ | ++... . ..+.+.+.++..+|
T Consensus 52 ~PvVv~lHG~~~~~~~-y~~l~-------------~~Las~G~~VvapD~~-g--~~~~~----~-~~~i~d~~~~~~~l 109 (313)
T PLN00021 52 YPVLLFLHGYLLYNSF-YSQLL-------------QHIASHGFIVVAPQLY-T--LAGPD----G-TDEIKDAAAVINWL 109 (313)
T ss_pred CCEEEEECCCCCCccc-HHHHH-------------HHHHhCCCEEEEecCC-C--cCCCC----c-hhhHHHHHHHHHHH
Confidence 5999999998766543 21110 01122 2567888877 3 32211 1 12223355666666
Q ss_pred HHHHHh-Cc---ccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCC
Q 012362 146 MELFNK-NE---ILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (465)
Q Consensus 146 ~~F~~~-fP---~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~ 203 (465)
.+-++. .| +....+++|+|+|.||+.+-.+|.+..+. .....+++++.-+++..
T Consensus 110 ~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~----~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 110 SSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAV----SLPLKFSALIGLDPVDG 167 (313)
T ss_pred HhhhhhhcccccccChhheEEEEECcchHHHHHHHhhcccc----ccccceeeEEeeccccc
Confidence 654432 12 22236799999999999888887554321 11246788887776543
No 82
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=94.70 E-value=0.03 Score=51.51 Aligned_cols=105 Identities=22% Similarity=0.303 Sum_probs=75.5
Q ss_pred CCEEEEECCCCCccccccccccccCCCcccCCCCCCch----hccccceeecCCCccccccccCCCCcccChHHHHHHHH
Q 012362 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTW----LKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLT 142 (465)
Q Consensus 67 ~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw----~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~ 142 (465)
+|++|+++|.-|-= |-+. +-.| +-..||+-+|-- |-|-|.+...+.--..|.+++.|
T Consensus 78 ~pTlLyfh~NAGNm----Ghr~------------~i~~~fy~~l~mnv~ivsYR-GYG~S~GspsE~GL~lDs~avld-- 138 (300)
T KOG4391|consen 78 RPTLLYFHANAGNM----GHRL------------PIARVFYVNLKMNVLIVSYR-GYGKSEGSPSEEGLKLDSEAVLD-- 138 (300)
T ss_pred CceEEEEccCCCcc----cchh------------hHHHHHHHHcCceEEEEEee-ccccCCCCccccceeccHHHHHH--
Confidence 49999999876643 3222 2222 345788999976 99999876443334445555443
Q ss_pred HHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCc
Q 012362 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (465)
Q Consensus 143 ~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p 204 (465)
.+...|...++++.++|.|-||.-+-.+|++-.+ .+.++|+-|-+++-
T Consensus 139 -----yl~t~~~~dktkivlfGrSlGGAvai~lask~~~---------ri~~~ivENTF~SI 186 (300)
T KOG4391|consen 139 -----YLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD---------RISAIIVENTFLSI 186 (300)
T ss_pred -----HHhcCccCCcceEEEEecccCCeeEEEeeccchh---------heeeeeeechhccc
Confidence 4567888889999999999999988888866443 68999999988774
No 83
>PRK11071 esterase YqiA; Provisional
Probab=94.49 E-value=0.06 Score=49.32 Aligned_cols=55 Identities=9% Similarity=-0.068 Sum_probs=43.3
Q ss_pred cCCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccCCcChH
Q 012362 363 KGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVDQPC 442 (465)
Q Consensus 363 ~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~DqP~ 442 (465)
...+|+|.+|+.|-++|+..+.+..++. ..+.+.||+|.- ...+
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~~----------------------------------~~~~~~ggdH~f--~~~~ 178 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAAC----------------------------------RQTVEEGGNHAF--VGFE 178 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHhc----------------------------------ceEEECCCCcch--hhHH
Confidence 3578999999999999999887776631 124679999997 4448
Q ss_pred HHHHHHHHHhc
Q 012362 443 IALNMLAAMTD 453 (465)
Q Consensus 443 ~a~~mi~~fl~ 453 (465)
..++.+..|++
T Consensus 179 ~~~~~i~~fl~ 189 (190)
T PRK11071 179 RYFNQIVDFLG 189 (190)
T ss_pred HhHHHHHHHhc
Confidence 89999999875
No 84
>PRK11460 putative hydrolase; Provisional
Probab=94.30 E-value=0.24 Score=46.87 Aligned_cols=39 Identities=18% Similarity=0.003 Sum_probs=25.9
Q ss_pred cCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCC
Q 012362 155 LQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (465)
Q Consensus 155 ~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~ 202 (465)
....+++|+|.|.||..+-.++.+-. + .+.+++.-+|..
T Consensus 100 ~~~~~i~l~GfS~Gg~~al~~a~~~~------~---~~~~vv~~sg~~ 138 (232)
T PRK11460 100 VGASATALIGFSQGAIMALEAVKAEP------G---LAGRVIAFSGRY 138 (232)
T ss_pred CChhhEEEEEECHHHHHHHHHHHhCC------C---cceEEEEecccc
Confidence 34568999999999998877664311 1 245566656654
No 85
>PRK10115 protease 2; Provisional
Probab=94.21 E-value=0.13 Score=56.66 Aligned_cols=114 Identities=16% Similarity=0.077 Sum_probs=67.1
Q ss_pred CCEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCcccccccc----CCCCcccChHHHHHHHH
Q 012362 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVE----DNSSFVKNDVEAANDLT 142 (465)
Q Consensus 67 ~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~----~~~~~~~s~~~~A~d~~ 142 (465)
.|+||+.+||||.+.. -++.. .-.+|.+..=++.+=.+.|.| .|+. .+.. ..-...-+|+.
T Consensus 445 ~P~ll~~hGg~~~~~~-p~f~~-----------~~~~l~~rG~~v~~~n~RGs~-g~G~~w~~~g~~--~~k~~~~~D~~ 509 (686)
T PRK10115 445 NPLLVYGYGSYGASID-ADFSF-----------SRLSLLDRGFVYAIVHVRGGG-ELGQQWYEDGKF--LKKKNTFNDYL 509 (686)
T ss_pred CCEEEEEECCCCCCCC-CCccH-----------HHHHHHHCCcEEEEEEcCCCC-ccCHHHHHhhhh--hcCCCcHHHHH
Confidence 4999999999999954 22111 112455554444444455543 2221 1110 01113456666
Q ss_pred HHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCcc
Q 012362 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (465)
Q Consensus 143 ~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~ 205 (465)
...+-..+. .--....+.|.|-||||..+-..+..-.+ .++.++.++|++|..
T Consensus 510 a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd---------lf~A~v~~vp~~D~~ 562 (686)
T PRK10115 510 DACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAINQRPE---------LFHGVIAQVPFVDVV 562 (686)
T ss_pred HHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHhcChh---------heeEEEecCCchhHh
Confidence 666544433 32335689999999999976665432212 589999999999874
No 86
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=94.17 E-value=0.12 Score=50.03 Aligned_cols=113 Identities=19% Similarity=0.230 Sum_probs=71.4
Q ss_pred CCEEEEECCCCCccccccccccccCCCcccCCCCCCch-hccccceeecCCCccccccccCC-----CCcccChHHHHHH
Q 012362 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTW-LKKADLLFVDNPVGTGYSYVEDN-----SSFVKNDVEAAND 140 (465)
Q Consensus 67 ~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw-~~~~n~lyiDqPvGvGfSy~~~~-----~~~~~s~~~~A~d 140 (465)
+++++|+-|-||.-.- +--|.+ .| +.. +....++=+... |+|..... +....+.++..+.
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~------~L----~~~l~~~~~i~~ish~---Gh~~~~~~~~~~~~~~~~sL~~QI~h 67 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLS------AL----YEKLNPQFEILGISHA---GHSTSPSNSKFSPNGRLFSLQDQIEH 67 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHH------HH----HHhCCCCCeeEEecCC---CCcCCcccccccCCCCccCHHHHHHH
Confidence 4899999999999875 532210 01 111 344455555533 45444332 3356788899999
Q ss_pred HHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCC
Q 012362 141 LTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (465)
Q Consensus 141 ~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg 200 (465)
-++||+++....+ -.+.+++|.|||=|.+.+-.+.++.. ....+++++++-=|
T Consensus 68 k~~~i~~~~~~~~-~~~~~liLiGHSIGayi~levl~r~~------~~~~~V~~~~lLfP 120 (266)
T PF10230_consen 68 KIDFIKELIPQKN-KPNVKLILIGHSIGAYIALEVLKRLP------DLKFRVKKVILLFP 120 (266)
T ss_pred HHHHHHHHhhhhc-CCCCcEEEEeCcHHHHHHHHHHHhcc------ccCCceeEEEEeCC
Confidence 9999999987664 23689999999999775555554443 12346666665333
No 87
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=94.05 E-value=0.052 Score=46.48 Aligned_cols=93 Identities=18% Similarity=0.283 Sum_probs=59.2
Q ss_pred EEEEECCCCCccccccccccccCCCcccCCCCCCchhcc-ccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHH
Q 012362 69 IILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKK-ADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (465)
Q Consensus 69 l~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~-~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~ 147 (465)
+||++||+.|.+.. +..+. ..+.+. .+++.+|.| |.|.+.. ...++++++.+.
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~-------------~~l~~~G~~v~~~~~~-~~~~~~~----------~~~~~~~~~~~~- 54 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLA-------------EALAEQGYAVVAFDYP-GHGDSDG----------ADAVERVLADIR- 54 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHH-------------HHHHHTTEEEEEESCT-TSTTSHH----------SHHHHHHHHHHH-
T ss_pred CEEEECCCCCCHHH-HHHHH-------------HHHHHCCCEEEEEecC-CCCccch----------hHHHHHHHHHHH-
Confidence 58999999886654 32221 133333 788999988 7776621 113333333332
Q ss_pred HHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCC
Q 012362 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (465)
Q Consensus 148 F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~ 201 (465)
...+ ..++++|+|.|.||..+..++.+- -.+++++.-+|+
T Consensus 55 --~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~----------~~v~~~v~~~~~ 94 (145)
T PF12695_consen 55 --AGYP--DPDRIILIGHSMGGAIAANLAARN----------PRVKAVVLLSPY 94 (145)
T ss_dssp --HHHC--TCCEEEEEEETHHHHHHHHHHHHS----------TTESEEEEESES
T ss_pred --hhcC--CCCcEEEEEEccCcHHHHHHhhhc----------cceeEEEEecCc
Confidence 3233 357999999999999888877632 268888886663
No 88
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=93.92 E-value=2.7 Score=41.26 Aligned_cols=68 Identities=21% Similarity=0.289 Sum_probs=49.5
Q ss_pred CCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccC--CcCh
Q 012362 364 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVP--VDQP 441 (465)
Q Consensus 364 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP--~DqP 441 (465)
..+|+||+|..|.++|...+...++++-=. + ..+++|.++.+++|+.. ...|
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~----------------G----------~a~V~~~~~~~~~H~~~~~~~~~ 272 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAA----------------G----------GADVEYVRYPGGGHLGAAFASAP 272 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHc----------------C----------CCCEEEEecCCCChhhhhhcCcH
Confidence 489999999999999999999999986411 1 01688999999999964 4666
Q ss_pred HHHHHHHHHHhcCCCcc
Q 012362 442 CIALNMLAAMTDSPASA 458 (465)
Q Consensus 442 ~~a~~mi~~fl~~~~~~ 458 (465)
.+ +.-|..=+.|++-.
T Consensus 273 ~a-~~Wl~~rf~G~~~~ 288 (290)
T PF03583_consen 273 DA-LAWLDDRFAGKPAT 288 (290)
T ss_pred HH-HHHHHHHHCCCCCC
Confidence 44 45555445555433
No 89
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=93.68 E-value=1.4 Score=49.38 Aligned_cols=85 Identities=14% Similarity=0.126 Sum_probs=54.5
Q ss_pred ccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCc--------------ccCCCCEEEEecccccch
Q 012362 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNE--------------ILQKSPLFIVAESYGGKF 171 (465)
Q Consensus 106 ~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP--------------~~~~~~~~I~GESYgG~Y 171 (465)
+=++++++|.+ |+|-|-+.-. . -..+-.+|..+.+. |+.... ...+-++-++|.||+|..
T Consensus 278 rGYaVV~~D~R-Gtg~SeG~~~---~-~~~~E~~D~~~vIe-Wl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 278 RGFAVVYVSGI-GTRGSDGCPT---T-GDYQEIESMKAVID-WLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred CCeEEEEEcCC-CCCCCCCcCc---c-CCHHHHHHHHHHHH-HHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 45789999976 9999976521 1 11233444444443 554321 122458999999999998
Q ss_pred HHHHHHHHHHHHHcCcceeeeeeEEccCCCCCcc
Q 012362 172 AATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (465)
Q Consensus 172 vP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~ 205 (465)
...+|..-. -.||.|+-..|+.+..
T Consensus 352 ~~~aAa~~p---------p~LkAIVp~a~is~~y 376 (767)
T PRK05371 352 PNAVATTGV---------EGLETIIPEAAISSWY 376 (767)
T ss_pred HHHHHhhCC---------CcceEEEeeCCCCcHH
Confidence 777664321 2689999877777643
No 90
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=93.64 E-value=0.22 Score=46.76 Aligned_cols=40 Identities=23% Similarity=0.238 Sum_probs=29.9
Q ss_pred ccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCC
Q 012362 154 ILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (465)
Q Consensus 154 ~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~ 202 (465)
..-.+.+|++|.|-||.....++....+ -+.++++-.|..
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd---------~faa~a~~sG~~ 132 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPD---------LFAAVAVVSGVP 132 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCc---------cceEEEeecccc
Confidence 3446789999999999988888765433 577888766654
No 91
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=93.39 E-value=0.22 Score=55.36 Aligned_cols=120 Identities=26% Similarity=0.366 Sum_probs=67.7
Q ss_pred ceeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchhcc------cc
Q 012362 36 EEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKK------AD 109 (465)
Q Consensus 36 ~~sGyv~v~~~~~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~------~n 109 (465)
.+.+-+.+ ++....+++.-.++ -++.++-|++++..||||.-+- .+.| .-+|+.. +=
T Consensus 498 ~~~~~i~~-~~~~~~~~~~lP~~--~~~~~kyPllv~~yGGP~sq~v-~~~~-------------~~~~~~~~~s~~g~~ 560 (755)
T KOG2100|consen 498 VEFGKIEI-DGITANAILILPPN--FDPSKKYPLLVVVYGGPGSQSV-TSKF-------------SVDWNEVVVSSRGFA 560 (755)
T ss_pred ceeEEEEe-ccEEEEEEEecCCC--CCCCCCCCEEEEecCCCCccee-eeeE-------------EecHHHHhhccCCeE
Confidence 34455555 33466677765432 2455567999999999983222 2211 2344433 45
Q ss_pred ceeecCCCccccccccCCCCcccCh-HHHHHHHHHHHHHHHHhCcccCC-CCEEEEecccccchHHHH
Q 012362 110 LLFVDNPVGTGYSYVEDNSSFVKND-VEAANDLTTLLMELFNKNEILQK-SPLFIVAESYGGKFAATL 175 (465)
Q Consensus 110 ~lyiDqPvGvGfSy~~~~~~~~~s~-~~~A~d~~~fL~~F~~~fP~~~~-~~~~I~GESYgG~YvP~i 175 (465)
++.|| +.|+|+.--.--....... ..-.+|...+.+.+.+.+ |.. ..+.|+|-||||...-.+
T Consensus 561 v~~vd-~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~--~iD~~ri~i~GwSyGGy~t~~~ 625 (755)
T KOG2100|consen 561 VLQVD-GRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLP--FIDRSRVAIWGWSYGGYLTLKL 625 (755)
T ss_pred EEEEc-CCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcc--cccHHHeEEeccChHHHHHHHH
Confidence 67888 7788866322000001111 012445556666665554 444 569999999999855444
No 92
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=92.93 E-value=0.35 Score=51.12 Aligned_cols=35 Identities=17% Similarity=0.077 Sum_probs=23.3
Q ss_pred HHHHHHHHHHhCcccCCCCEEEEecccccchHHHHH
Q 012362 141 LTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (465)
Q Consensus 141 ~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia 176 (465)
.++++++-...|.. -.+++.|+|+|.||+.+-.++
T Consensus 160 al~wv~~~i~~fgg-d~~~v~~~G~SaG~~~~~~~~ 194 (493)
T cd00312 160 ALKWVQDNIAAFGG-DPDSVTIFGESAGGASVSLLL 194 (493)
T ss_pred HHHHHHHHHHHhCC-CcceEEEEeecHHHHHhhhHh
Confidence 34555555555532 246899999999998765554
No 93
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=92.33 E-value=4.4 Score=42.70 Aligned_cols=87 Identities=20% Similarity=0.311 Sum_probs=64.8
Q ss_pred cHHHHHHHHhcCCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCC-ceeeEEEEEECCeEEEEEcC
Q 012362 353 RISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGND-KITKGFKKSYKNLHFYWILG 431 (465)
Q Consensus 353 ~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~-~~~~G~~k~~~nLtfv~V~~ 431 (465)
..+.|....++|=|+|+|+|..|.+++..+|.++-+++.=.-- +. .++..| +.|..|+|
T Consensus 342 ~~pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g--------------~~~~~v~dF------~RlF~vPG 401 (474)
T PF07519_consen 342 TDPDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMG--------------GALADVDDF------YRLFMVPG 401 (474)
T ss_pred CCcCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcc--------------cccccccce------eEEEecCC
Confidence 3456777778899999999999999999999999988751100 00 012222 45788999
Q ss_pred ccccc--CCcChHHHHHHHHHHhcCCCccc
Q 012362 432 AGHFV--PVDQPCIALNMLAAMTDSPASAS 459 (465)
Q Consensus 432 AGHmv--P~DqP~~a~~mi~~fl~~~~~~~ 459 (465)
.||-- |-..|-.++.-|.+|+.+..-|.
T Consensus 402 m~HC~gG~g~~~~d~l~aL~~WVE~G~AP~ 431 (474)
T PF07519_consen 402 MGHCGGGPGPDPFDALTALVDWVENGKAPE 431 (474)
T ss_pred CcccCCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 99985 55577789999999999866554
No 94
>PLN02454 triacylglycerol lipase
Probab=90.75 E-value=0.64 Score=47.50 Aligned_cols=70 Identities=13% Similarity=0.233 Sum_probs=52.4
Q ss_pred ChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCc
Q 012362 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (465)
Q Consensus 133 s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p 204 (465)
+...+.+++...+++..+++|.++ ..++|+|||.||-.+-..|..|...... ...++++.+..|.|-+..
T Consensus 204 ~~~S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~-~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 204 TKLSARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVS-GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhccc-ccCCceEEEEeCCCcccC
Confidence 345688899999999999998753 4699999999999998888887653111 123457778888877754
No 95
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=90.46 E-value=0.69 Score=44.86 Aligned_cols=59 Identities=17% Similarity=0.177 Sum_probs=47.8
Q ss_pred CCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccCCcChHH
Q 012362 364 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVDQPCI 443 (465)
Q Consensus 364 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~DqP~~ 443 (465)
.+|++++.|..|.++|..-.+++.+.+. +-+.+++. +||+.++.+|+.
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~-------------------------------~~~~~~l~-~gH~p~ls~P~~ 258 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP-------------------------------PSQVYELE-SDHSPFFSTPFL 258 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC-------------------------------ccEEEEEC-CCCCccccCHHH
Confidence 5899999999999999887777766653 11345674 999999999999
Q ss_pred HHHHHHHHhcC
Q 012362 444 ALNMLAAMTDS 454 (465)
Q Consensus 444 a~~mi~~fl~~ 454 (465)
..++|.++...
T Consensus 259 ~~~~i~~~a~~ 269 (273)
T PLN02211 259 LFGLLIKAAAS 269 (273)
T ss_pred HHHHHHHHHHH
Confidence 99999988654
No 96
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=90.33 E-value=0.76 Score=51.00 Aligned_cols=99 Identities=19% Similarity=0.336 Sum_probs=62.2
Q ss_pred CCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchh-ccccceeecCCCccccc-cccC--------CCC--c--
Q 012362 65 KPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPVGTGYS-YVED--------NSS--F-- 130 (465)
Q Consensus 65 ~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~-~~~n~lyiDqPvGvGfS-y~~~--------~~~--~-- 130 (465)
...|+|+++||=.|....+. .+. ..+. +-..++-+|.| |.|-| ...+ .+. +
T Consensus 447 ~g~P~VVllHG~~g~~~~~~-~lA-------------~~La~~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~y~N 511 (792)
T TIGR03502 447 DGWPVVIYQHGITGAKENAL-AFA-------------GTLAAAGVATIAIDHP-LHGARSFDANASGVNATNANVLAYMN 511 (792)
T ss_pred CCCcEEEEeCCCCCCHHHHH-HHH-------------HHHHhCCcEEEEeCCC-CCCccccccccccccccccCccceec
Confidence 33589999998777665421 110 1222 23568899998 99988 3311 111 1
Q ss_pred -------ccChHHHHHHHHHHHHHHH------H---hCcccCCCCEEEEecccccchHHHHHHH
Q 012362 131 -------VKNDVEAANDLTTLLMELF------N---KNEILQKSPLFIVAESYGGKFAATLGLA 178 (465)
Q Consensus 131 -------~~s~~~~A~d~~~fL~~F~------~---~fP~~~~~~~~I~GESYgG~YvP~ia~~ 178 (465)
..+..+...|++......= . .+..+...++++.|||.||.....++..
T Consensus 512 l~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 512 LASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 1256788888876555432 1 1233556899999999999999888743
No 97
>PRK11460 putative hydrolase; Provisional
Probab=90.00 E-value=0.66 Score=43.87 Aligned_cols=62 Identities=18% Similarity=0.133 Sum_probs=49.3
Q ss_pred CCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccCCcChHH
Q 012362 364 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVDQPCI 443 (465)
Q Consensus 364 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~DqP~~ 443 (465)
..+|++.+|+.|.++|..-.++..+.|+=. | .+.++.++.++||.+..+.-+.
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~----------------------g-----~~~~~~~~~~~gH~i~~~~~~~ 200 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISL----------------------G-----GDVTLDIVEDLGHAIDPRLMQF 200 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHC----------------------C-----CCeEEEEECCCCCCCCHHHHHH
Confidence 589999999999999999999888887510 1 2567888899999998766666
Q ss_pred HHHHHHHHh
Q 012362 444 ALNMLAAMT 452 (465)
Q Consensus 444 a~~mi~~fl 452 (465)
+.+.|.+++
T Consensus 201 ~~~~l~~~l 209 (232)
T PRK11460 201 ALDRLRYTV 209 (232)
T ss_pred HHHHHHHHc
Confidence 666666666
No 98
>COG0400 Predicted esterase [General function prediction only]
Probab=89.68 E-value=3.5 Score=38.34 Aligned_cols=97 Identities=19% Similarity=0.162 Sum_probs=60.8
Q ss_pred CCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeE
Q 012362 116 PVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGV 195 (465)
Q Consensus 116 PvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi 195 (465)
+....|+.....+....+....+..+.+||....+.+. ...+++++.|-|=|+.++-++..... -.++|+
T Consensus 58 g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~g-i~~~~ii~~GfSqGA~ial~~~l~~~---------~~~~~a 127 (207)
T COG0400 58 GGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYG-IDSSRIILIGFSQGANIALSLGLTLP---------GLFAGA 127 (207)
T ss_pred CcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhC-CChhheEEEecChHHHHHHHHHHhCc---------hhhccc
Confidence 33444555443322233445556677788887777653 33578999999999998887764432 268899
Q ss_pred EccCCCCCcccc----cccchhhhccCCCCh
Q 012362 196 ALGDSWISPEDF----FSWGPLLKDMSRLDT 222 (465)
Q Consensus 196 ~IGNg~~~p~~~----~~~~~~~~~~~~id~ 222 (465)
++-.|..-+... ..-.+.+.-+|.-|+
T Consensus 128 il~~g~~~~~~~~~~~~~~~pill~hG~~Dp 158 (207)
T COG0400 128 ILFSGMLPLEPELLPDLAGTPILLSHGTEDP 158 (207)
T ss_pred hhcCCcCCCCCccccccCCCeEEEeccCcCC
Confidence 988887655432 344555555555444
No 99
>COG4099 Predicted peptidase [General function prediction only]
Probab=89.47 E-value=4.7 Score=39.25 Aligned_cols=114 Identities=23% Similarity=0.375 Sum_probs=61.4
Q ss_pred CceEEEEEEEcCCCCCCCCCCC-CEEEEECCCCCccc-------cccccccccCCCcccCCCCCCchhccccceeecCCC
Q 012362 46 KAHMFWWLYKSPYRIENPSKPW-PIILWLQGGPGASG-------VGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPV 117 (465)
Q Consensus 46 ~~~lf~w~~es~~~~~~~~~~~-pl~lwl~GGPG~sS-------~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPv 117 (465)
+.+|-|-+|.-+. -+|.++. ||+|||||+--.++ .+.|...+.||=.- -||=.|=
T Consensus 171 gneLkYrly~Pkd--y~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedq---------------cfVlAPQ 233 (387)
T COG4099 171 GNELKYRLYTPKD--YAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQ---------------CFVLAPQ 233 (387)
T ss_pred CceeeEEEecccc--cCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCc---------------eEEEccc
Confidence 4688899987532 3465656 99999999543222 12455555555210 2222231
Q ss_pred ccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHH
Q 012362 118 GTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (465)
Q Consensus 118 GvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~ 181 (465)
|+-.-+.++ ...+.--....+.+.+=+..++..-.+.+|++|-|-||.-.-+++.+..+
T Consensus 234 ---y~~if~d~e--~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd 292 (387)
T COG4099 234 ---YNPIFADSE--EKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD 292 (387)
T ss_pred ---ccccccccc--cccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch
Confidence 111000000 01111112233444444445666667899999999999987777665544
No 100
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=89.18 E-value=0.22 Score=46.37 Aligned_cols=59 Identities=22% Similarity=0.204 Sum_probs=40.5
Q ss_pred CCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccCCcChHH
Q 012362 364 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVDQPCI 443 (465)
Q Consensus 364 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~DqP~~ 443 (465)
+.+|++.+|+.|.++|....+...+.|+= .+ .+++|.++.|.||-++ .+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~------------------~~---------~~v~~~~~~g~gH~i~----~~ 203 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKA------------------AG---------ANVEFHEYPGGGHEIS----PE 203 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHC------------------TT----------GEEEEEETT-SSS------HH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHh------------------cC---------CCEEEEEcCCCCCCCC----HH
Confidence 47999999999999999988888777751 01 1688889999999996 35
Q ss_pred HHHHHHHHhc
Q 012362 444 ALNMLAAMTD 453 (465)
Q Consensus 444 a~~mi~~fl~ 453 (465)
.+..+.+||.
T Consensus 204 ~~~~~~~~l~ 213 (216)
T PF02230_consen 204 ELRDLREFLE 213 (216)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 5555666664
No 101
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=88.98 E-value=0.38 Score=44.28 Aligned_cols=65 Identities=23% Similarity=0.332 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHhC--cccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCc
Q 012362 135 VEAANDLTTLLMELFNKN--EILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (465)
Q Consensus 135 ~~~A~d~~~fL~~F~~~f--P~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p 204 (465)
.+..+|+.++++-..+.- -.+...+++|+|+|=||+.+-.++..+.+. +. ..++++++-.|++|.
T Consensus 46 p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~---~~--~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 46 PAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDR---GL--PKPKGIILISPWTDL 112 (211)
T ss_dssp THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHT---TT--CHESEEEEESCHSST
T ss_pred cccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhh---cc--cchhhhhcccccccc
Confidence 355666666666444430 123357899999999999999999766552 11 238999998887764
No 102
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=88.61 E-value=1.3 Score=40.42 Aligned_cols=64 Identities=22% Similarity=0.258 Sum_probs=45.1
Q ss_pred HHhcCCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccCCc
Q 012362 360 LLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVD 439 (465)
Q Consensus 360 LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~D 439 (465)
+.+...++++..|+.|.+.+......+...+.. ...++++.++||+...+
T Consensus 217 ~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~gH~~~~~ 266 (282)
T COG0596 217 LARITVPTLIIHGEDDPVVPAELARRLAAALPN------------------------------DARLVVIPGAGHFPHLE 266 (282)
T ss_pred hccCCCCeEEEecCCCCcCCHHHHHHHHhhCCC------------------------------CceEEEeCCCCCcchhh
Confidence 334469999999999966554443333333321 35668899999999999
Q ss_pred ChHHHHHHHHHHhc
Q 012362 440 QPCIALNMLAAMTD 453 (465)
Q Consensus 440 qP~~a~~mi~~fl~ 453 (465)
+|+...+.+..|+.
T Consensus 267 ~p~~~~~~i~~~~~ 280 (282)
T COG0596 267 APEAFAAALLAFLE 280 (282)
T ss_pred cHHHHHHHHHHHHh
Confidence 99987777776543
No 103
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=88.12 E-value=2.2 Score=43.48 Aligned_cols=108 Identities=23% Similarity=0.318 Sum_probs=64.1
Q ss_pred CCCEEEEECCCCCcccccc-----ccccccCCCcccCCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHH
Q 012362 66 PWPIILWLQGGPGASGVGI-----GNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAAND 140 (465)
Q Consensus 66 ~~pl~lwl~GGPG~sS~~~-----g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d 140 (465)
++|++|.|.|=+|.|.-.+ ...++.| |+ ++-+ .+.|-|-|--++..-+..... +|
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r---------------~VVf-N~RG~~g~~LtTpr~f~ag~t---~D 183 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YR---------------VVVF-NHRGLGGSKLTTPRLFTAGWT---ED 183 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cE---------------EEEE-CCCCCCCCccCCCceeecCCH---HH
Confidence 4599999999998886421 2223333 22 2212 266888777665543333332 33
Q ss_pred HHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCC
Q 012362 141 LTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (465)
Q Consensus 141 ~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~ 202 (465)
+-++++---++||+ ++++.+|.|+||..+- +++-+. ++..-=..|++|-|||-
T Consensus 184 l~~~v~~i~~~~P~---a~l~avG~S~Gg~iL~---nYLGE~---g~~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 184 LREVVNHIKKRYPQ---APLFAVGFSMGGNILT---NYLGEE---GDNTPLIAAVAVCNPWD 236 (409)
T ss_pred HHHHHHHHHHhCCC---CceEEEEecchHHHHH---HHhhhc---cCCCCceeEEEEeccch
Confidence 44444444467885 7999999999998643 334332 22222357888888875
No 104
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=87.53 E-value=2 Score=42.27 Aligned_cols=43 Identities=16% Similarity=0.239 Sum_probs=34.5
Q ss_pred CCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccC
Q 012362 364 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVP 437 (465)
Q Consensus 364 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP 437 (465)
.+++||.+|+.|.+||....+++.+.+. +..++++.++||+..
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~~-------------------------------~~~~~~~~~~gH~~~ 290 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAFP-------------------------------EAELKVTNNAGHSAF 290 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhCC-------------------------------CCEEEEECCCCCCCC
Confidence 4899999999999999987776666643 345677899999974
No 105
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=85.77 E-value=1.4 Score=37.66 Aligned_cols=62 Identities=16% Similarity=0.195 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCC
Q 012362 136 EAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (465)
Q Consensus 136 ~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~ 202 (465)
...+.+.+.|++..+++| +.++.|+|||-||-.+..++..+.+.... ...+++-+..|.|-+
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~--~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS--SSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT--STTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc--cccceeeeecCCccc
Confidence 455667777888777777 47899999999999999999888763211 134667777776655
No 106
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=85.49 E-value=1.7 Score=40.33 Aligned_cols=54 Identities=26% Similarity=0.281 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCC
Q 012362 138 ANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (465)
Q Consensus 138 A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~ 202 (465)
++.+.+++....+.. ...++++|.|-|-||..+-.++.+.. -.+.|++.-+|++
T Consensus 87 ~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~~p---------~~~~gvv~lsG~~ 140 (216)
T PF02230_consen 87 AERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALRYP---------EPLAGVVALSGYL 140 (216)
T ss_dssp HHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHCTS---------STSSEEEEES---
T ss_pred HHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHHcC---------cCcCEEEEeeccc
Confidence 334444444433322 44678999999999998888774321 2678888755554
No 107
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=85.46 E-value=1.8 Score=36.71 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=26.6
Q ss_pred HHHhcCCeEEEEecCCcccCCchhHHHHHHHcC
Q 012362 359 ELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLK 391 (465)
Q Consensus 359 ~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~ 391 (465)
.+-...++|++..|+.|.+++....+++.++++
T Consensus 99 ~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~ 131 (145)
T PF12695_consen 99 DLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP 131 (145)
T ss_dssp HHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC
T ss_pred hhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC
Confidence 344557899999999999999888888888875
No 108
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=85.15 E-value=2 Score=43.21 Aligned_cols=62 Identities=6% Similarity=-0.029 Sum_probs=46.6
Q ss_pred cCCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccCCcCh-
Q 012362 363 KGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVDQP- 441 (465)
Q Consensus 363 ~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~DqP- 441 (465)
-.++||++.|+.|.+++....+.+.+.+.= .+.++.++ .+||+.+.+.|
T Consensus 285 i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~-----------------------------~~~~~~~~-~~gH~~~~~~~~ 334 (350)
T TIGR01836 285 IKMPILNIYAERDHLVPPDASKALNDLVSS-----------------------------EDYTELSF-PGGHIGIYVSGK 334 (350)
T ss_pred CCCCeEEEecCCCCcCCHHHHHHHHHHcCC-----------------------------CCeEEEEc-CCCCEEEEECch
Confidence 368999999999999999988888887640 12334444 58999998876
Q ss_pred --HHHHHHHHHHhcC
Q 012362 442 --CIALNMLAAMTDS 454 (465)
Q Consensus 442 --~~a~~mi~~fl~~ 454 (465)
+.+..-|.+|+..
T Consensus 335 ~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 335 AQKEVPPAIGKWLQA 349 (350)
T ss_pred hHhhhhHHHHHHHHh
Confidence 5666777788754
No 109
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=84.70 E-value=1.6 Score=40.49 Aligned_cols=43 Identities=14% Similarity=0.050 Sum_probs=35.4
Q ss_pred hHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHH
Q 012362 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (465)
Q Consensus 134 ~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~ 178 (465)
.+-+-.|+..+++.|++.+++ +|||.|+|||=|+..+-.|-++
T Consensus 73 ~~~ay~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 73 FDLAYSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred HHhhHHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHHHHH
Confidence 345567889999999999887 8999999999998877666544
No 110
>PLN02571 triacylglycerol lipase
Probab=84.58 E-value=2.6 Score=43.17 Aligned_cols=69 Identities=12% Similarity=0.109 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHH--HHc---CcceeeeeeEEccCCCCCc
Q 012362 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKA--IEA---GKLKLKLGGVALGDSWISP 204 (465)
Q Consensus 135 ~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~--~~~---~~~~inLkGi~IGNg~~~p 204 (465)
..+.++++..|+.+.+++|.. ..+++|+|||.||-.+-..|..|... +.. .+..+++..+..|.|-+..
T Consensus 204 ~Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN 277 (413)
T PLN02571 204 TSARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGD 277 (413)
T ss_pred hhHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccC
Confidence 466788999999999988865 45799999999999998888887642 110 1123456677777776654
No 111
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=83.84 E-value=2.3 Score=38.83 Aligned_cols=37 Identities=22% Similarity=0.295 Sum_probs=29.7
Q ss_pred CCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCcc
Q 012362 157 KSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (465)
Q Consensus 157 ~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~ 205 (465)
...+.|.|-|.||.|+-.+|.+. +++. ++.||.+.|.
T Consensus 58 ~~~~~liGSSlGG~~A~~La~~~-----------~~~a-vLiNPav~p~ 94 (187)
T PF05728_consen 58 PENVVLIGSSLGGFYATYLAERY-----------GLPA-VLINPAVRPY 94 (187)
T ss_pred CCCeEEEEEChHHHHHHHHHHHh-----------CCCE-EEEcCCCCHH
Confidence 44599999999999999998654 5666 5569998874
No 112
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=83.41 E-value=2.3 Score=43.23 Aligned_cols=62 Identities=23% Similarity=0.213 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHhCcccCC-CCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCcc
Q 012362 135 VEAANDLTTLLMELFNKNEILQK-SPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (465)
Q Consensus 135 ~~~A~d~~~fL~~F~~~fP~~~~-~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~ 205 (465)
-..|.|...+|......+|...+ .|..+.|.||||. +..++.+|. +-.+.||+=-.+|+-|.
T Consensus 160 IMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~y-la~l~~k~a--------P~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 160 IMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGY-LAHLCAKIA--------PWLFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHH-HHHHHHhhC--------ccceeEEEecCccccch
Confidence 36799999999999999999985 7999999999885 444544553 23567777666777663
No 113
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.76 E-value=1.9 Score=40.87 Aligned_cols=96 Identities=20% Similarity=0.353 Sum_probs=53.0
Q ss_pred CCCCEEEEECCCCCccccccccccccCCCc-ccCCCCCCchh--ccccceeecCCCccccccccCC---CCcccChHHHH
Q 012362 65 KPWPIILWLQGGPGASGVGIGNFEEVGPFD-TYLKPRNSTWL--KKADLLFVDNPVGTGYSYVEDN---SSFVKNDVEAA 138 (465)
Q Consensus 65 ~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~-~~l~~~~~sw~--~~~n~lyiDqPvGvGfSy~~~~---~~~~~s~~~~A 138 (465)
.++|+++|+-|.||-++. ++|.|=-. .++..+---|+ ...+. +-| -|-.++. ....-+.++..
T Consensus 27 ~~~~li~~IpGNPG~~gF----Y~~F~~~L~~~l~~r~~~wtIsh~~H~---~~P----~sl~~~~s~~~~eifsL~~QV 95 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGF----YTEFARHLHLNLIDRLPVWTISHAGHA---LMP----ASLREDHSHTNEEIFSLQDQV 95 (301)
T ss_pred CCceEEEEecCCCCchhH----HHHHHHHHHHhcccccceeEEeccccc---cCC----cccccccccccccccchhhHH
Confidence 346999999999998753 44433211 12221111232 22222 223 1111111 11234566666
Q ss_pred HHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHH
Q 012362 139 NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (465)
Q Consensus 139 ~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia 176 (465)
+.=.+|++++. |. ++++||.|+|=|...+..+-
T Consensus 96 ~HKlaFik~~~---Pk--~~ki~iiGHSiGaYm~Lqil 128 (301)
T KOG3975|consen 96 DHKLAFIKEYV---PK--DRKIYIIGHSIGAYMVLQIL 128 (301)
T ss_pred HHHHHHHHHhC---CC--CCEEEEEecchhHHHHHHHh
Confidence 77778888664 43 89999999999866555543
No 114
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=82.50 E-value=2.6 Score=36.79 Aligned_cols=43 Identities=23% Similarity=0.287 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHH
Q 012362 136 EAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (465)
Q Consensus 136 ~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~ 181 (465)
.++..+...+++....+| ..+++|+|+|.||..+-.+|..+.+
T Consensus 9 ~~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~ 51 (153)
T cd00741 9 SLANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRG 51 (153)
T ss_pred HHHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHh
Confidence 445555556666555556 4689999999999999998887754
No 115
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=82.43 E-value=3 Score=43.37 Aligned_cols=32 Identities=16% Similarity=0.023 Sum_probs=23.1
Q ss_pred HHHHHHHHhCcccCCCCEEEEecccccchHHHH
Q 012362 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATL 175 (465)
Q Consensus 143 ~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~i 175 (465)
+++++..+.|-.= ...+-|+|||=|++-|-.+
T Consensus 166 kWV~~NIe~FGGD-p~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 166 KWVRDNIEAFGGD-PQNVTLFGESAGAASILTL 197 (491)
T ss_pred HHHHHHHHHhCCC-ccceEEeeccchHHHHHHh
Confidence 5666666666542 3579999999998876654
No 116
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=81.52 E-value=2.6 Score=39.98 Aligned_cols=69 Identities=17% Similarity=0.141 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCcc
Q 012362 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (465)
Q Consensus 134 ~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~ 205 (465)
....+..+.+||+...+.. ..++++|.+||.|++-+-..-..+..........-+|..|++-+|-++..
T Consensus 72 a~~s~~~l~~~L~~L~~~~---~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 72 ARFSGPALARFLRDLARAP---GIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDND 140 (233)
T ss_pred HHHHHHHHHHHHHHHHhcc---CCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHH
Confidence 3445555666665554332 25799999999999987776666554322111223788999988888753
No 117
>PF03283 PAE: Pectinacetylesterase
Probab=81.41 E-value=6.1 Score=40.08 Aligned_cols=127 Identities=13% Similarity=0.091 Sum_probs=65.7
Q ss_pred CEEEEECCCCCcccccc---ccccccCCCc-----c--------cCCCCCCchhccccceeecCCCccccccccCCCCcc
Q 012362 68 PIILWLQGGPGASGVGI---GNFEEVGPFD-----T--------YLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFV 131 (465)
Q Consensus 68 pl~lwl~GGPG~sS~~~---g~f~E~GP~~-----~--------~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~ 131 (465)
-+||.|.||--|.+... -...++|-.. + +...||.-+ ..|++||=-=.|.-|+- +.+...
T Consensus 51 ~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~--~wN~V~vpYC~Gd~~~G--~~~~~~ 126 (361)
T PF03283_consen 51 KWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFY--NWNHVFVPYCDGDSHSG--DVEPVD 126 (361)
T ss_pred eEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCccc--cccEEEEEecCCccccC--cccccc
Confidence 69999999999988411 1112333221 0 122355222 25677774333444443 111111
Q ss_pred cCh---H-HHHHHHHHHHHHHHHh-CcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCC
Q 012362 132 KND---V-EAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (465)
Q Consensus 132 ~s~---~-~~A~d~~~fL~~F~~~-fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~ 203 (465)
... - .-...+-.+|...... +++ -.++.|+|.|=||.-+..-+.++.+.... ..+++++.=..-++|
T Consensus 127 ~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp~---~~~v~~~~DsG~f~d 198 (361)
T PF03283_consen 127 YGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLPS---SVKVKCLSDSGFFLD 198 (361)
T ss_pred cCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhcc---CceEEEecccccccc
Confidence 111 1 1133333444444554 554 46799999999999888888887765432 234554444322333
No 118
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=80.91 E-value=3.9 Score=37.28 Aligned_cols=61 Identities=15% Similarity=0.210 Sum_probs=49.6
Q ss_pred ccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccC
Q 012362 131 VKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGD 199 (465)
Q Consensus 131 ~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGN 199 (465)
..+.+++|.|+-+.++.+.++.. .+.+.|+|-|+|.--+|.+..++....++ .++++.+-.
T Consensus 44 ~rtP~~~a~Dl~~~i~~y~~~w~---~~~vvLiGYSFGADvlP~~~nrLp~~~r~-----~v~~v~Ll~ 104 (192)
T PF06057_consen 44 ERTPEQTAADLARIIRHYRARWG---RKRVVLIGYSFGADVLPFIYNRLPAALRA-----RVAQVVLLS 104 (192)
T ss_pred hCCHHHHHHHHHHHHHHHHHHhC---CceEEEEeecCCchhHHHHHhhCCHHHHh-----heeEEEEec
Confidence 46789999999999998877653 68899999999999999999988765433 677777733
No 119
>PRK10985 putative hydrolase; Provisional
Probab=80.78 E-value=4.2 Score=40.33 Aligned_cols=46 Identities=15% Similarity=0.066 Sum_probs=34.4
Q ss_pred CCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccCCcC
Q 012362 364 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVDQ 440 (465)
Q Consensus 364 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~Dq 440 (465)
.+++|+.+|+.|.+++....+.+ .++ ..+++++++.++||+.+.+.
T Consensus 255 ~~P~lii~g~~D~~~~~~~~~~~-~~~------------------------------~~~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 255 RKPTLIIHAKDDPFMTHEVIPKP-ESL------------------------------PPNVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CCCEEEEecCCCCCCChhhChHH-HHh------------------------------CCCeEEEECCCCCceeeCCC
Confidence 68999999999999986544332 221 12677888999999998874
No 120
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=80.03 E-value=4.2 Score=38.09 Aligned_cols=63 Identities=14% Similarity=0.136 Sum_probs=43.4
Q ss_pred hHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCC
Q 012362 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (465)
Q Consensus 134 ~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~ 203 (465)
-....+++...++...+++| +.+++++|||-||-.+-.+|..+.+.. ...+++.+..|.|-+.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~----~~~~i~~~tFg~P~vg 169 (229)
T cd00519 107 YKSLYNQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG----PGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC----CCCceEEEEeCCCCCC
Confidence 33444455566666666666 468999999999999988888776532 1235778888877663
No 121
>PRK04940 hypothetical protein; Provisional
Probab=79.55 E-value=4.9 Score=36.40 Aligned_cols=59 Identities=15% Similarity=0.224 Sum_probs=39.7
Q ss_pred cChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCcc
Q 012362 132 KNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (465)
Q Consensus 132 ~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~ 205 (465)
....++...+.+.+.++... .. ..++.|+|-|-||.|+..+|.+- .++.|+| ||.+.|.
T Consensus 37 ~~P~~a~~~l~~~i~~~~~~--~~-~~~~~liGSSLGGyyA~~La~~~-----------g~~aVLi-NPAv~P~ 95 (180)
T PRK04940 37 LHPKHDMQHLLKEVDKMLQL--SD-DERPLICGVGLGGYWAERIGFLC-----------GIRQVIF-NPNLFPE 95 (180)
T ss_pred CCHHHHHHHHHHHHHHhhhc--cC-CCCcEEEEeChHHHHHHHHHHHH-----------CCCEEEE-CCCCChH
Confidence 34555555454444443221 11 24799999999999999999764 6777666 9999885
No 122
>COG0400 Predicted esterase [General function prediction only]
Probab=79.39 E-value=3.7 Score=38.15 Aligned_cols=60 Identities=22% Similarity=0.343 Sum_probs=43.2
Q ss_pred cCCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccCCcChH
Q 012362 363 KGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVDQPC 442 (465)
Q Consensus 363 ~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~DqP~ 442 (465)
.+.||++.+|..|-+||..-+++..+.|.=.|. +..+.++. .||.+|.+-
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~---------------------------~v~~~~~~-~GH~i~~e~-- 194 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTASGA---------------------------DVEVRWHE-GGHEIPPEE-- 194 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHHcCC---------------------------CEEEEEec-CCCcCCHHH--
Confidence 469999999999999999999998888762111 34445566 999997544
Q ss_pred HHHHHHHHHhcC
Q 012362 443 IALNMLAAMTDS 454 (465)
Q Consensus 443 ~a~~mi~~fl~~ 454 (465)
++.+++|+.+
T Consensus 195 --~~~~~~wl~~ 204 (207)
T COG0400 195 --LEAARSWLAN 204 (207)
T ss_pred --HHHHHHHHHh
Confidence 4444455543
No 123
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=79.37 E-value=1.1 Score=44.97 Aligned_cols=71 Identities=20% Similarity=0.229 Sum_probs=49.4
Q ss_pred ccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHH
Q 012362 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (465)
Q Consensus 106 ~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~ 181 (465)
...|||.||--.+..-.|.. .+.+...+++.+-.||+.+...+ .+.-.++||.|+|.|+|.+=..++++..
T Consensus 103 ~d~NVI~VDWs~~a~~~Y~~----a~~n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASNNYPQ----AVANTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp S-EEEEEEE-HHHHSS-HHH----HHHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred CCceEEEEcchhhccccccc----hhhhHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 36799999987777655542 24567778888888888776432 2335789999999999988887777643
No 124
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=78.28 E-value=4.9 Score=47.77 Aligned_cols=101 Identities=14% Similarity=0.168 Sum_probs=66.0
Q ss_pred CEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHH
Q 012362 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (465)
Q Consensus 68 pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~ 147 (465)
|.++.++|++|.+.. +..+. ........++-+|.| |.|-+. ....+.++.|.+....++.
T Consensus 1069 ~~l~~lh~~~g~~~~-~~~l~-------------~~l~~~~~v~~~~~~-g~~~~~-----~~~~~l~~la~~~~~~i~~ 1128 (1296)
T PRK10252 1069 PTLFCFHPASGFAWQ-FSVLS-------------RYLDPQWSIYGIQSP-RPDGPM-----QTATSLDEVCEAHLATLLE 1128 (1296)
T ss_pred CCeEEecCCCCchHH-HHHHH-------------HhcCCCCcEEEEECC-CCCCCC-----CCCCCHHHHHHHHHHHHHh
Confidence 568889998887765 32111 111234677888988 666431 2245788888888877764
Q ss_pred HHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCC
Q 012362 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (465)
Q Consensus 148 F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg 200 (465)
. .| ..+++|.|+|+||..+-.+|.++.+. + ..+..+++-++
T Consensus 1129 ~---~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~---~---~~v~~l~l~~~ 1169 (1296)
T PRK10252 1129 Q---QP---HGPYHLLGYSLGGTLAQGIAARLRAR---G---EEVAFLGLLDT 1169 (1296)
T ss_pred h---CC---CCCEEEEEechhhHHHHHHHHHHHHc---C---CceeEEEEecC
Confidence 2 22 35899999999999888888766432 1 24555555444
No 125
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=78.27 E-value=4.3 Score=42.14 Aligned_cols=65 Identities=22% Similarity=0.269 Sum_probs=43.9
Q ss_pred cChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCcc
Q 012362 132 KNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (465)
Q Consensus 132 ~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~ 205 (465)
-|.+|+-.|+..|++.+-.++....+.|+.++|-||||..+.-+-.+-.+ -+.|.+--.+-+...
T Consensus 87 Lt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~---------~~~ga~ASSapv~a~ 151 (434)
T PF05577_consen 87 LTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH---------LFDGAWASSAPVQAK 151 (434)
T ss_dssp -SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TT---------T-SEEEEET--CCHC
T ss_pred cCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCC---------eeEEEEeccceeeee
Confidence 57889999999999988777766667899999999999877666544322 355666656655553
No 126
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=77.98 E-value=2.2 Score=41.24 Aligned_cols=85 Identities=16% Similarity=0.093 Sum_probs=57.4
Q ss_pred ccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHc
Q 012362 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA 185 (465)
Q Consensus 106 ~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~ 185 (465)
+=+.+|.+|.- |+|-|.+.-. ....+-++|.++.+. |+...|-- +-++-++|-||+|......|..-
T Consensus 56 ~GY~vV~~D~R-G~g~S~G~~~----~~~~~e~~D~~d~I~-W~~~Qpws-~G~VGm~G~SY~G~~q~~~A~~~------ 122 (272)
T PF02129_consen 56 RGYAVVVQDVR-GTGGSEGEFD----PMSPNEAQDGYDTIE-WIAAQPWS-NGKVGMYGISYGGFTQWAAAARR------ 122 (272)
T ss_dssp TT-EEEEEE-T-TSTTS-S-B-----TTSHHHHHHHHHHHH-HHHHCTTE-EEEEEEEEETHHHHHHHHHHTTT------
T ss_pred CCCEEEEECCc-ccccCCCccc----cCChhHHHHHHHHHH-HHHhCCCC-CCeEEeeccCHHHHHHHHHHhcC------
Confidence 45678999955 9999986522 215556777777665 77777653 44799999999999888877522
Q ss_pred CcceeeeeeEEccCCCCCccc
Q 012362 186 GKLKLKLGGVALGDSWISPED 206 (465)
Q Consensus 186 ~~~~inLkGi~IGNg~~~p~~ 206 (465)
.--||.|+..-++.|...
T Consensus 123 ---~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 123 ---PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp ----TTEEEEEEESE-SBTCC
T ss_pred ---CCCceEEEecccCCcccc
Confidence 125999998877777643
No 127
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=77.90 E-value=9.6 Score=37.46 Aligned_cols=44 Identities=23% Similarity=0.179 Sum_probs=33.9
Q ss_pred CCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCcc
Q 012362 157 KSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (465)
Q Consensus 157 ~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~ 205 (465)
.+.+.|+|+|=||+.+-.++....+. .....++.++.-|++|..
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~-----~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDR-----GLPLPAAQVLISPLLDLT 194 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhc-----CCCCceEEEEEecccCCc
Confidence 56899999999999999998776542 123567788878888764
No 128
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=77.39 E-value=3.7 Score=42.41 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=25.1
Q ss_pred CCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCC
Q 012362 158 SPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (465)
Q Consensus 158 ~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~ 201 (465)
....|+|.||||.-+-+++.+-.+ .+.+++.-+|.
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd---------~Fg~v~s~Sgs 322 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPE---------RFGCVLSQSGS 322 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcc---------cccEEEEeccc
Confidence 468999999999988888755332 45666665553
No 129
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=75.83 E-value=5.3 Score=41.61 Aligned_cols=42 Identities=17% Similarity=0.213 Sum_probs=32.7
Q ss_pred hHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHH
Q 012362 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (465)
Q Consensus 134 ~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~ 178 (465)
.++..+++.+.++..++..+ .++++|.|||.||-.+-.++..
T Consensus 141 ~~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 141 LPETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHHH
Confidence 35566778888888877654 5799999999999888877643
No 130
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=75.70 E-value=21 Score=34.74 Aligned_cols=96 Identities=16% Similarity=0.112 Sum_probs=57.6
Q ss_pred cHHHHHHHHhcCCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCc
Q 012362 353 RISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGA 432 (465)
Q Consensus 353 ~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~A 432 (465)
..+.|+.|-+..+||||..|-.|.++--.=.++..... .+.+.|.-....+= +....+.--+.+...-.-|.|.+-
T Consensus 201 q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f--~~l~Hf~~~~~~se--ee~~kI~~~f~~~~~~~sv~f~~d 276 (297)
T PF06342_consen 201 QKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF--KGLDHFNIEKEISE--EEKPKILKSFASGQKGASVFFAKD 276 (297)
T ss_pred HHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh--CCccceeeecCCCh--hHHHHHHHHHhcCCceeEEEEecC
Confidence 35567777777899999999999998665555555543 45555532111000 000000000011123445778999
Q ss_pred ccccCCcChHHHHHHHHHHh
Q 012362 433 GHFVPVDQPCIALNMLAAMT 452 (465)
Q Consensus 433 GHmvP~DqP~~a~~mi~~fl 452 (465)
||+..-.||+-.-+.+.+.+
T Consensus 277 gHf~qK~~A~lIA~~i~~mf 296 (297)
T PF06342_consen 277 GHFQQKFRADLIAEAIKKMF 296 (297)
T ss_pred ChHHhHHHHHHHHHHHHHhh
Confidence 99999999988877777654
No 131
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=75.55 E-value=7.7 Score=38.65 Aligned_cols=61 Identities=20% Similarity=0.283 Sum_probs=41.3
Q ss_pred ccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcc-cCCCCEEEEecccccchHHH
Q 012362 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEI-LQKSPLFIVAESYGGKFAAT 174 (465)
Q Consensus 106 ~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~-~~~~~~~I~GESYgG~YvP~ 174 (465)
..+|+|..--| |||+|.+. + +.++...| ++++.+++...++ -+-+.+.+.|+|-||--...
T Consensus 170 ~~aNvl~fNYp-GVg~S~G~-----~-s~~dLv~~-~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~ 231 (365)
T PF05677_consen 170 LGANVLVFNYP-GVGSSTGP-----P-SRKDLVKD-YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAE 231 (365)
T ss_pred cCCcEEEECCC-ccccCCCC-----C-CHHHHHHH-HHHHHHHHHhcccCCChheEEEeeccccHHHHHH
Confidence 45799999988 99999653 2 34444444 3455556654432 34578999999999975443
No 132
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=74.64 E-value=4.5 Score=41.16 Aligned_cols=68 Identities=29% Similarity=0.435 Sum_probs=44.3
Q ss_pred cccceeec-------CCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHH
Q 012362 107 KADLLFVD-------NPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (465)
Q Consensus 107 ~~n~lyiD-------qPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia 176 (465)
.|-|+|++ +|.|.- ||.+...----|.+|+-.|+.+.|+ ++++...=+..|+..+|-||||+...-+-
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyLtseQALADfA~ll~-~lK~~~~a~~~pvIafGGSYGGMLaAWfR 185 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGYLTSEQALADFAELLT-FLKRDLSAEASPVIAFGGSYGGMLAAWFR 185 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhccccHHHHHHHHHHHHH-HHhhccccccCcEEEecCchhhHHHHHHH
Confidence 35566665 577777 6654332223456677666665555 66655444578999999999997666554
No 133
>PLN02324 triacylglycerol lipase
Probab=74.00 E-value=9.9 Score=39.03 Aligned_cols=48 Identities=13% Similarity=0.104 Sum_probs=39.2
Q ss_pred ChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHH
Q 012362 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (465)
Q Consensus 133 s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~ 181 (465)
+...+.+++...|+.+.+.+|.. ...++|+|||-||-.+-..|..|..
T Consensus 191 ~k~SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~ 238 (415)
T PLN02324 191 DTTSAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVY 238 (415)
T ss_pred chhHHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHH
Confidence 34567888899999999888853 3479999999999999888888765
No 134
>PLN02753 triacylglycerol lipase
Probab=72.76 E-value=9.6 Score=40.19 Aligned_cols=72 Identities=11% Similarity=0.118 Sum_probs=51.1
Q ss_pred ChHHHHHHHHHHHHHHHHhCcc--cCCCCEEEEecccccchHHHHHHHHHHH--HH-cCcceeeeeeEEccCCCCCc
Q 012362 133 NDVEAANDLTTLLMELFNKNEI--LQKSPLFIVAESYGGKFAATLGLAAVKA--IE-AGKLKLKLGGVALGDSWISP 204 (465)
Q Consensus 133 s~~~~A~d~~~fL~~F~~~fP~--~~~~~~~I~GESYgG~YvP~ia~~i~~~--~~-~~~~~inLkGi~IGNg~~~p 204 (465)
+...+.+++...++.+.+.+|. .....++|+|||-||-.+-..|..|... +. .....+++.-+..|.|-+..
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN 361 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGN 361 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccC
Confidence 4456888999999999988864 2346899999999999999988887652 11 11123456666677666654
No 135
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=72.52 E-value=9 Score=39.64 Aligned_cols=58 Identities=7% Similarity=-0.126 Sum_probs=44.5
Q ss_pred CCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccCCcChHH
Q 012362 364 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVDQPCI 443 (465)
Q Consensus 364 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~DqP~~ 443 (465)
.++||+.+|..|.+||....+.+..... +..++.+.++ |+ .++|+.
T Consensus 355 ~~PvLiI~G~~D~ivP~~~a~~l~~~~~-------------------------------~~~l~~i~~~-~~--~e~~~~ 400 (414)
T PRK05077 355 PTPMLSGYWKNDPFSPEEDSRLIASSSA-------------------------------DGKLLEIPFK-PV--YRNFDK 400 (414)
T ss_pred CCcEEEEecCCCCCCCHHHHHHHHHhCC-------------------------------CCeEEEccCC-Cc--cCCHHH
Confidence 5799999999999999998886654432 2335667776 33 469999
Q ss_pred HHHHHHHHhcCC
Q 012362 444 ALNMLAAMTDSP 455 (465)
Q Consensus 444 a~~mi~~fl~~~ 455 (465)
++..+.+||+..
T Consensus 401 ~~~~i~~wL~~~ 412 (414)
T PRK05077 401 ALQEISDWLEDR 412 (414)
T ss_pred HHHHHHHHHHHH
Confidence 999999998753
No 136
>PLN02719 triacylglycerol lipase
Probab=71.73 E-value=6.9 Score=41.09 Aligned_cols=71 Identities=11% Similarity=0.150 Sum_probs=50.2
Q ss_pred hHHHHHHHHHHHHHHHHhCcccC--CCCEEEEecccccchHHHHHHHHHHH--HHc-CcceeeeeeEEccCCCCCc
Q 012362 134 DVEAANDLTTLLMELFNKNEILQ--KSPLFIVAESYGGKFAATLGLAAVKA--IEA-GKLKLKLGGVALGDSWISP 204 (465)
Q Consensus 134 ~~~~A~d~~~fL~~F~~~fP~~~--~~~~~I~GESYgG~YvP~ia~~i~~~--~~~-~~~~inLkGi~IGNg~~~p 204 (465)
...+.+++...++...+.+|.+. ...++|+|||-||-.+-..|..|.+. +.. ....+++.-+..|.|-+..
T Consensus 272 k~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN 347 (518)
T PLN02719 272 KFSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGN 347 (518)
T ss_pred chhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccC
Confidence 34577889999999999998653 35799999999999999988888653 111 1122345556666666654
No 137
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=71.14 E-value=3.2 Score=38.24 Aligned_cols=71 Identities=17% Similarity=0.123 Sum_probs=50.8
Q ss_pred ccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEc
Q 012362 118 GTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVAL 197 (465)
Q Consensus 118 GvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~I 197 (465)
-|||-+.+. ..+.+++-.++.++++--|+.+|.- +.+.+.|+|-|.|.+-....++-. -.+.|+++
T Consensus 102 svgY~l~~q----~htL~qt~~~~~~gv~filk~~~n~--k~l~~gGHSaGAHLa~qav~R~r~--------prI~gl~l 167 (270)
T KOG4627|consen 102 SVGYNLCPQ----VHTLEQTMTQFTHGVNFILKYTENT--KVLTFGGHSAGAHLAAQAVMRQRS--------PRIWGLIL 167 (270)
T ss_pred EeccCcCcc----cccHHHHHHHHHHHHHHHHHhcccc--eeEEEcccchHHHHHHHHHHHhcC--------chHHHHHH
Confidence 456666543 4678899999999999777888763 459999999999987776665432 14667777
Q ss_pred cCCCC
Q 012362 198 GDSWI 202 (465)
Q Consensus 198 GNg~~ 202 (465)
-.|+-
T Consensus 168 ~~GvY 172 (270)
T KOG4627|consen 168 LCGVY 172 (270)
T ss_pred HhhHh
Confidence 55543
No 138
>PLN02761 lipase class 3 family protein
Probab=70.47 E-value=12 Score=39.49 Aligned_cols=72 Identities=8% Similarity=0.105 Sum_probs=50.1
Q ss_pred ChHHHHHHHHHHHHHHHHhCccc-C--CCCEEEEecccccchHHHHHHHHHHHHH----cCcceeeeeeEEccCCCCCc
Q 012362 133 NDVEAANDLTTLLMELFNKNEIL-Q--KSPLFIVAESYGGKFAATLGLAAVKAIE----AGKLKLKLGGVALGDSWISP 204 (465)
Q Consensus 133 s~~~~A~d~~~fL~~F~~~fP~~-~--~~~~~I~GESYgG~YvP~ia~~i~~~~~----~~~~~inLkGi~IGNg~~~p 204 (465)
+...+.+++...++...+.+|.. + ...++|+|||.||-.+-..|..|....- .....+++.-+..|.|=+..
T Consensus 266 ~k~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN 344 (527)
T PLN02761 266 SSFSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGN 344 (527)
T ss_pred cchhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCC
Confidence 34467888999999998888642 2 3469999999999999888888764211 11234456666777766654
No 139
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=69.98 E-value=19 Score=38.78 Aligned_cols=130 Identities=18% Similarity=0.203 Sum_probs=70.7
Q ss_pred eEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchhccc----------cceeecCCC
Q 012362 48 HMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKA----------DLLFVDNPV 117 (465)
Q Consensus 48 ~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~----------n~lyiDqPv 117 (465)
-+.|-..-.+.. -+|-+..|++|.+-||||.-=. .|.++|.+.. =|++||.-
T Consensus 624 ~~lYgmiyKPhn-~~pgkkYptvl~VYGGP~VQlV----------------nnsfkgi~ylR~~~LaslGy~Vv~IDnR- 685 (867)
T KOG2281|consen 624 LTLYGMIYKPHN-FQPGKKYPTVLNVYGGPGVQLV----------------NNSFKGIQYLRFCRLASLGYVVVFIDNR- 685 (867)
T ss_pred cEEEEEEEcccc-CCCCCCCceEEEEcCCCceEEe----------------eccccceehhhhhhhhhcceEEEEEcCC-
Confidence 444544444322 3455557999999999987633 3777777543 35889965
Q ss_pred cccc---ccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCC-CCEEEEecccccchHHHHHHHHHHHHHcCcceeeee
Q 012362 118 GTGY---SYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQK-SPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLG 193 (465)
Q Consensus 118 GvGf---Sy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~-~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLk 193 (465)
|+-- -+-..-. ......+ ++|=++-||-.-++.- |.. ..+-|-|-||||....+.-.+-.+ -++
T Consensus 686 GS~hRGlkFE~~ik-~kmGqVE-~eDQVeglq~Laeq~g-fidmdrV~vhGWSYGGYLSlm~L~~~P~---------Ifr 753 (867)
T KOG2281|consen 686 GSAHRGLKFESHIK-KKMGQVE-VEDQVEGLQMLAEQTG-FIDMDRVGVHGWSYGGYLSLMGLAQYPN---------IFR 753 (867)
T ss_pred CccccchhhHHHHh-hccCeee-ehhhHHHHHHHHHhcC-cccchheeEeccccccHHHHHHhhcCcc---------eee
Confidence 4321 1100000 0001111 2333455554444432 333 458999999999866554222111 256
Q ss_pred eEEccCCCCCcccc
Q 012362 194 GVALGDSWISPEDF 207 (465)
Q Consensus 194 Gi~IGNg~~~p~~~ 207 (465)
-.|-|.|.++....
T Consensus 754 vAIAGapVT~W~~Y 767 (867)
T KOG2281|consen 754 VAIAGAPVTDWRLY 767 (867)
T ss_pred EEeccCcceeeeee
Confidence 67778888877533
No 140
>COG0627 Predicted esterase [General function prediction only]
Probab=69.98 E-value=11 Score=37.58 Aligned_cols=125 Identities=18% Similarity=0.161 Sum_probs=68.6
Q ss_pred CCCCEEEEECCCCCccccccccccccCCCccc--------CCCCCCchhccccceeecCCCccccccccCCCCcccChHH
Q 012362 65 KPWPIILWLQGGPGASGVGIGNFEEVGPFDTY--------LKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVE 136 (465)
Q Consensus 65 ~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~--------l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~ 136 (465)
++-|++ |+.+|..|.. =.+.+.++.+-. ..+.-.-+....++-=|+ |+|.|.|+-.+-........
T Consensus 52 ~~ipV~-~~l~G~t~~~---~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~~~~- 125 (316)
T COG0627 52 RDIPVL-YLLSGLTCNE---PNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPWASG- 125 (316)
T ss_pred CCCCEE-EEeCCCCCCC---CceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCccccC-
Confidence 443555 4555788884 245555665421 112233355555555555 79999998553321111111
Q ss_pred HHHHHHHHHH-----HHHHhCcccCC-CCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCcc
Q 012362 137 AANDLTTLLM-----ELFNKNEILQK-SPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (465)
Q Consensus 137 ~A~d~~~fL~-----~F~~~fP~~~~-~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~ 205 (465)
..+++.||. .+.+.||--+. ..-.|+|.|.||+=+-.+|.+-.+ .++.++==.|+++|.
T Consensus 126 -~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd---------~f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 -PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPD---------RFKSASSFSGILSPS 190 (316)
T ss_pred -ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcc---------hhceecccccccccc
Confidence 244555543 34455663321 268899999999988888765432 355555555666553
No 141
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=69.93 E-value=7.3 Score=37.16 Aligned_cols=101 Identities=18% Similarity=0.277 Sum_probs=61.3
Q ss_pred CCEEEEECCCCCccccccc----cccccCCCcccCCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHH
Q 012362 67 WPIILWLQGGPGASGVGIG----NFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLT 142 (465)
Q Consensus 67 ~pl~lwl~GGPG~sS~~~g----~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~ 142 (465)
.+.+|+.+|- +.- .| +|. +.|=.=..|+.=.|-- |-|.|-++..+ .+.-+-.+..|
T Consensus 60 ~~~lly~hGN---a~D-lgq~~~~~~------------~l~~~ln~nv~~~DYS-GyG~S~G~psE---~n~y~Di~avy 119 (258)
T KOG1552|consen 60 HPTLLYSHGN---AAD-LGQMVELFK------------ELSIFLNCNVVSYDYS-GYGRSSGKPSE---RNLYADIKAVY 119 (258)
T ss_pred ceEEEEcCCc---ccc-hHHHHHHHH------------HHhhcccceEEEEecc-cccccCCCccc---ccchhhHHHHH
Confidence 4999999987 221 22 222 2222235667777766 99999876443 24445555667
Q ss_pred HHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCC
Q 012362 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (465)
Q Consensus 143 ~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~ 203 (465)
++|++=+. +..++.|+|.|-|-.=.-.+|.+ . .+.|+++-+|+++
T Consensus 120 e~Lr~~~g-----~~~~Iil~G~SiGt~~tv~Lasr---------~--~~~alVL~SPf~S 164 (258)
T KOG1552|consen 120 EWLRNRYG-----SPERIILYGQSIGTVPTVDLASR---------Y--PLAAVVLHSPFTS 164 (258)
T ss_pred HHHHhhcC-----CCceEEEEEecCCchhhhhHhhc---------C--CcceEEEeccchh
Confidence 77764221 35799999999996532223221 1 3889998666664
No 142
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=69.30 E-value=8.4 Score=38.63 Aligned_cols=78 Identities=8% Similarity=0.004 Sum_probs=47.5
Q ss_pred ccceeecCCCccccccccCCCCcccChHHHH-HHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcC
Q 012362 108 ADLLFVDNPVGTGYSYVEDNSSFVKNDVEAA-NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAG 186 (465)
Q Consensus 108 ~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A-~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~ 186 (465)
.+++-+|-. |-|.|-. ..+.++.+ +++-.+++...+..+ ..++++.|+|+||..+..++..-.+
T Consensus 95 ~~V~~~D~~-g~g~s~~------~~~~~d~~~~~~~~~v~~l~~~~~---~~~i~lvGhS~GG~i~~~~~~~~~~----- 159 (350)
T TIGR01836 95 QDVYLIDWG-YPDRADR------YLTLDDYINGYIDKCVDYICRTSK---LDQISLLGICQGGTFSLCYAALYPD----- 159 (350)
T ss_pred CeEEEEeCC-CCCHHHh------cCCHHHHHHHHHHHHHHHHHHHhC---CCcccEEEECHHHHHHHHHHHhCch-----
Confidence 578888865 5565421 12333443 345555555555443 4689999999999877665533211
Q ss_pred cceeeeeeEEccCCCCCc
Q 012362 187 KLKLKLGGVALGDSWISP 204 (465)
Q Consensus 187 ~~~inLkGi~IGNg~~~p 204 (465)
.++++++-++.++.
T Consensus 160 ----~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 160 ----KIKNLVTMVTPVDF 173 (350)
T ss_pred ----heeeEEEecccccc
Confidence 47788777665553
No 143
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=67.75 E-value=9.9 Score=36.85 Aligned_cols=38 Identities=21% Similarity=0.232 Sum_probs=31.1
Q ss_pred ChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccc
Q 012362 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGK 170 (465)
Q Consensus 133 s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~ 170 (465)
.-.++|+.+++.+..-....|+=+.=++|++|||-|..
T Consensus 84 ~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~ 121 (289)
T PF10081_consen 84 AAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAY 121 (289)
T ss_pred hHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCcccc
Confidence 45678889999999988888886545699999998754
No 144
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=67.62 E-value=21 Score=33.89 Aligned_cols=86 Identities=19% Similarity=0.360 Sum_probs=60.8
Q ss_pred CEEEEECCCCCccccccccccccCCCcccCCCCCCchhc----cccceeecCCCccccccccCCCCcccChHHHHHHHHH
Q 012362 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK----KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTT 143 (465)
Q Consensus 68 pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~----~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~ 143 (465)
+-++.+.=--|.+|. + -+|.+ ..-++=|+-| |-|--+. ....++.++.|+.+..
T Consensus 8 ~~L~cfP~AGGsa~~-f-----------------r~W~~~lp~~iel~avqlP-GR~~r~~---ep~~~di~~Lad~la~ 65 (244)
T COG3208 8 LRLFCFPHAGGSASL-F-----------------RSWSRRLPADIELLAVQLP-GRGDRFG---EPLLTDIESLADELAN 65 (244)
T ss_pred ceEEEecCCCCCHHH-H-----------------HHHHhhCCchhheeeecCC-CcccccC---CcccccHHHHHHHHHH
Confidence 667777655556665 4 35554 3567888988 7774443 2456778888888777
Q ss_pred HHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHH
Q 012362 144 LLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (465)
Q Consensus 144 fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~ 181 (465)
.|+- -+..+|+-++|+|+||..+=.+|.++-+
T Consensus 66 el~~------~~~d~P~alfGHSmGa~lAfEvArrl~~ 97 (244)
T COG3208 66 ELLP------PLLDAPFALFGHSMGAMLAFEVARRLER 97 (244)
T ss_pred Hhcc------ccCCCCeeecccchhHHHHHHHHHHHHH
Confidence 7653 2457899999999999988888877654
No 145
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=67.46 E-value=12 Score=35.12 Aligned_cols=50 Identities=18% Similarity=0.228 Sum_probs=34.1
Q ss_pred HHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCC
Q 012362 142 TTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (465)
Q Consensus 142 ~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg 200 (465)
.++|++....+++ +++|+|||=||..+-+.|..+.+..+. .++.+..-||
T Consensus 72 ~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~~~~~-----rI~~vy~fDg 121 (224)
T PF11187_consen 72 LAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDDEIQD-----RISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccHHHhh-----heeEEEEeeC
Confidence 3566666666654 699999999999999988775443222 4555555443
No 146
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=67.01 E-value=57 Score=36.27 Aligned_cols=159 Identities=16% Similarity=0.185 Sum_probs=81.7
Q ss_pred hhHHHHHHHHHHhhhcCCcccccccCCCCCCceeeeeEeCC------CceEEEEEEE-cCC--CCCCCCCCCCEEEEECC
Q 012362 5 CGFVATLLFLVSLLFNGGAAARALNKNQDASEEWGYVEVRP------KAHMFWWLYK-SPY--RIENPSKPWPIILWLQG 75 (465)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGyv~v~~------~~~lf~w~~e-s~~--~~~~~~~~~pl~lwl~G 75 (465)
+..+++|++++++.---++++..|-.+.=++.|.-+++++. ++-=+|.+-| ++. +...+.+- --||++-|
T Consensus 19 ~liia~ll~l~ll~~f~g~~en~CsmtYMypsy~r~i~i~~r~t~~a~kY~LYLY~Egs~~~e~~~lelsG-IPVLFIPG 97 (973)
T KOG3724|consen 19 ALIIAVLLGLGLLLHFLGHQENGCSMTYMYPSYYRFIEIPERLTPQADKYSLYLYREGSRWWERSTLELSG-IPVLFIPG 97 (973)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCceeEEEeccceeecCCcccccCCCCceEEEEecccccccccccccCCC-ceEEEecC
Confidence 33444444444433333366666655555555555566653 2333444444 221 11122222 34778877
Q ss_pred CCCc-------cccccccccccCCCccc-CCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHH
Q 012362 76 GPGA-------SGVGIGNFEEVGPFDTY-LKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (465)
Q Consensus 76 GPG~-------sS~~~g~f~E~GP~~~~-l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~ 147 (465)
.-|+ .|. ..+-..+||++-. -..|+++. ++ .=+|= .=-||-- .-.+..+.++.+.++++.
T Consensus 98 NAGSyKQvRSiAS~-a~n~y~~~~~e~t~~~d~~~~~-DF---FaVDF--nEe~tAm-----~G~~l~dQtEYV~dAIk~ 165 (973)
T KOG3724|consen 98 NAGSYKQVRSIASV-AQNAYQGGPFEKTEDRDNPFSF-DF---FAVDF--NEEFTAM-----HGHILLDQTEYVNDAIKY 165 (973)
T ss_pred CCCchHHHHHHHHH-HhhhhcCCchhhhhcccCcccc-ce---EEEcc--cchhhhh-----ccHhHHHHHHHHHHHHHH
Confidence 7764 232 2455678888732 23355444 11 11120 0011111 123567778888877775
Q ss_pred HHH---hCcccC---CCCEEEEecccccchHHHHH
Q 012362 148 LFN---KNEILQ---KSPLFIVAESYGGKFAATLG 176 (465)
Q Consensus 148 F~~---~fP~~~---~~~~~I~GESYgG~YvP~ia 176 (465)
-++ .-+||+ .+++.|.||||||.-+-..+
T Consensus 166 ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~ 200 (973)
T KOG3724|consen 166 ILSLYRGEREYASPLPHSVILVGHSMGGIVARATL 200 (973)
T ss_pred HHHHhhcccccCCCCCceEEEEeccchhHHHHHHH
Confidence 554 345565 56699999999998665544
No 147
>PLN02934 triacylglycerol lipase
Probab=65.44 E-value=15 Score=38.57 Aligned_cols=40 Identities=18% Similarity=0.276 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHH
Q 012362 139 NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (465)
Q Consensus 139 ~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~ 181 (465)
..+...|+++++.+|. .+++++|||-||-.+-..|..+..
T Consensus 305 ~~v~~~lk~ll~~~p~---~kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 305 YAVRSKLKSLLKEHKN---AKFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHHHHHHCCC---CeEEEeccccHHHHHHHHHHHHHH
Confidence 4577788888888886 579999999999998888876643
No 148
>PLN02408 phospholipase A1
Probab=64.01 E-value=12 Score=37.80 Aligned_cols=46 Identities=13% Similarity=0.057 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHH
Q 012362 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (465)
Q Consensus 135 ~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~ 181 (465)
..+.+++.+.++++.+.+|.. ...++|+|||.||-.+-..|..|..
T Consensus 178 ~s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~ 223 (365)
T PLN02408 178 PSLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKT 223 (365)
T ss_pred hhHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHH
Confidence 356778888899999988864 3469999999999999888887765
No 149
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=63.03 E-value=25 Score=31.33 Aligned_cols=76 Identities=18% Similarity=0.237 Sum_probs=47.9
Q ss_pred ccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHc
Q 012362 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA 185 (465)
Q Consensus 106 ~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~ 185 (465)
...+++-+|.| |.|.+-. ...+.+..++.....++. ..+ ..+++++|+|+||..+-.++..+.+.
T Consensus 24 ~~~~v~~~~~~-g~~~~~~-----~~~~~~~~~~~~~~~l~~---~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~--- 88 (212)
T smart00824 24 GRRDVSALPLP-GFGPGEP-----LPASADALVEAQAEAVLR---AAG---GRPFVLVGHSSGGLLAHAVAARLEAR--- 88 (212)
T ss_pred CCccEEEecCC-CCCCCCC-----CCCCHHHHHHHHHHHHHH---hcC---CCCeEEEEECHHHHHHHHHHHHHHhC---
Confidence 45678899988 6664421 233455556655555442 233 46899999999999988888776542
Q ss_pred CcceeeeeeEEccC
Q 012362 186 GKLKLKLGGVALGD 199 (465)
Q Consensus 186 ~~~~inLkGi~IGN 199 (465)
+ ..++++++.+
T Consensus 89 ~---~~~~~l~~~~ 99 (212)
T smart00824 89 G---IPPAAVVLLD 99 (212)
T ss_pred C---CCCcEEEEEc
Confidence 1 1356665544
No 150
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=63.01 E-value=22 Score=33.42 Aligned_cols=87 Identities=14% Similarity=0.114 Sum_probs=54.6
Q ss_pred cceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcc
Q 012362 109 DLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKL 188 (465)
Q Consensus 109 n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~ 188 (465)
+...|+-|.+.+-=-+-..-.+..|..+.++.+..+++.+.. ..+++.|+|.|-|+.-+-....++.+.-...
T Consensus 4 ~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~-- 76 (225)
T PF08237_consen 4 NVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDPP-- 76 (225)
T ss_pred ceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCC--
Confidence 345566665433211111112345677778888888887765 4789999999999887666666655421111
Q ss_pred eeeeeeEEccCCCC
Q 012362 189 KLKLGGVALGDSWI 202 (465)
Q Consensus 189 ~inLkGi~IGNg~~ 202 (465)
.-+++-+.+||+--
T Consensus 77 ~~~l~fVl~gnP~r 90 (225)
T PF08237_consen 77 PDDLSFVLIGNPRR 90 (225)
T ss_pred cCceEEEEecCCCC
Confidence 13788999999743
No 151
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=62.54 E-value=12 Score=34.86 Aligned_cols=45 Identities=13% Similarity=0.121 Sum_probs=34.9
Q ss_pred HHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCC
Q 012362 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (465)
Q Consensus 147 ~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~ 201 (465)
+|++.+|+....++-|.|-|.||-.+..+|.+.. .++.++..||.
T Consensus 11 ~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~----------~i~avVa~~ps 55 (213)
T PF08840_consen 11 DWLKSHPEVDPDKIGIIGISKGAELALLLASRFP----------QISAVVAISPS 55 (213)
T ss_dssp HHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS----------SEEEEEEES--
T ss_pred HHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC----------CccEEEEeCCc
Confidence 4888999998899999999999999999998753 57777776653
No 152
>PLN00413 triacylglycerol lipase
Probab=60.42 E-value=13 Score=38.83 Aligned_cols=39 Identities=23% Similarity=0.400 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHH
Q 012362 139 NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAV 180 (465)
Q Consensus 139 ~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~ 180 (465)
.++...|+++++.+|+ .+++|+|||.||..+-..|..+.
T Consensus 268 y~i~~~Lk~ll~~~p~---~kliVTGHSLGGALAtLaA~~L~ 306 (479)
T PLN00413 268 YTILRHLKEIFDQNPT---SKFILSGHSLGGALAILFTAVLI 306 (479)
T ss_pred HHHHHHHHHHHHHCCC---CeEEEEecCHHHHHHHHHHHHHH
Confidence 3567788888888885 47999999999999988887654
No 153
>PRK14567 triosephosphate isomerase; Provisional
Probab=60.21 E-value=17 Score=34.83 Aligned_cols=62 Identities=18% Similarity=0.289 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCccc
Q 012362 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (465)
Q Consensus 135 ~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~~ 206 (465)
.+.+++++.++++++..+-+-....+-|. |||.--|.=+..+++. -++.|+.||.+-+++..
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~-------~diDG~LVGgasL~~~~ 239 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSL-------PDVDGGLIGGASLKAAE 239 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcC-------CCCCEEEeehhhhcHHH
Confidence 56677899999999876422112234444 9999999999888763 26999999999998743
No 154
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=59.51 E-value=17 Score=33.90 Aligned_cols=48 Identities=15% Similarity=0.040 Sum_probs=36.2
Q ss_pred ChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHH
Q 012362 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (465)
Q Consensus 133 s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~ 181 (465)
+-+..++.+.+.|.+..+..+.- .+++.+.|+|.||.++-.....+.+
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~ 101 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHD 101 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhh
Confidence 45567888888888887766552 4799999999999998766555544
No 155
>PLN02802 triacylglycerol lipase
Probab=58.10 E-value=25 Score=37.00 Aligned_cols=65 Identities=9% Similarity=0.121 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCc
Q 012362 136 EAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (465)
Q Consensus 136 ~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p 204 (465)
.+.+++..-++.+++++|.. ...++|+|||.||-.+-..|..|..... ..+.+.-+..|.|-+..
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~---~~~pV~vyTFGsPRVGN 373 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVP---AAPPVAVFSFGGPRVGN 373 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCC---CCCceEEEEcCCCCccc
Confidence 56778888889888887753 3479999999999999888877754211 11234555666655543
No 156
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=57.85 E-value=33 Score=33.01 Aligned_cols=87 Identities=14% Similarity=0.134 Sum_probs=55.8
Q ss_pred CEEEEECCCCCccccccc-cccccCCCcccCCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHH
Q 012362 68 PIILWLQGGPGASGVGIG-NFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (465)
Q Consensus 68 pl~lwl~GGPG~sS~~~g-~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~ 146 (465)
|.+++++++=|.-.. +. |-.+.+ +..-++-++.| |-|. . .....+.++.|..-.+.++
T Consensus 1 ~pLF~fhp~~G~~~~-~~~L~~~l~--------------~~~~v~~l~a~-g~~~--~---~~~~~~l~~~a~~yv~~Ir 59 (257)
T COG3319 1 PPLFCFHPAGGSVLA-YAPLAAALG--------------PLLPVYGLQAP-GYGA--G---EQPFASLDDMAAAYVAAIR 59 (257)
T ss_pred CCEEEEcCCCCcHHH-HHHHHHHhc--------------cCceeeccccC-cccc--c---ccccCCHHHHHHHHHHHHH
Confidence 567888877666432 21 111111 22345667777 4442 1 1235677788877666666
Q ss_pred HHHHhCcccCCCCEEEEecccccchHHHHHHHHHH
Q 012362 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (465)
Q Consensus 147 ~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~ 181 (465)
+..|+ =|.+|.|-|+||.-+=.+|.++..
T Consensus 60 ---~~QP~---GPy~L~G~S~GG~vA~evA~qL~~ 88 (257)
T COG3319 60 ---RVQPE---GPYVLLGWSLGGAVAFEVAAQLEA 88 (257)
T ss_pred ---HhCCC---CCEEEEeeccccHHHHHHHHHHHh
Confidence 46776 399999999999999888888765
No 157
>PLN02310 triacylglycerol lipase
Probab=57.33 E-value=28 Score=35.76 Aligned_cols=65 Identities=17% Similarity=0.205 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHHhCccc-CCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCC
Q 012362 135 VEAANDLTTLLMELFNKNEIL-QKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (465)
Q Consensus 135 ~~~A~d~~~fL~~F~~~fP~~-~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~ 203 (465)
..+.+++...++...+.+++- ....+.|+|||-||-.+-..|..|... ...+++.-+..|.|-+.
T Consensus 185 ~sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~----~~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 185 LSASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATT----IPDLFVSVISFGAPRVG 250 (405)
T ss_pred chHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHh----CcCcceeEEEecCCCcc
Confidence 346677777888877766531 235799999999999988877666532 11234555566665554
No 158
>PRK11071 esterase YqiA; Provisional
Probab=57.32 E-value=23 Score=32.12 Aligned_cols=76 Identities=22% Similarity=0.310 Sum_probs=48.3
Q ss_pred CEEEEECCCCCccccccc-cccccCCCcccCCCCCCchhc---cccceeecCCCccccccccCCCCcccChHHHHHHHHH
Q 012362 68 PIILWLQGGPGASGVGIG-NFEEVGPFDTYLKPRNSTWLK---KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTT 143 (465)
Q Consensus 68 pl~lwl~GGPG~sS~~~g-~f~E~GP~~~~l~~~~~sw~~---~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~ 143 (465)
|.||+|||-+|++..+.. .+. .-+.+ ..+++.+|.| |.| ++.++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~-------------~~l~~~~~~~~v~~~dl~-g~~--------------~~~~~---- 49 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLK-------------NWLAQHHPDIEMIVPQLP-PYP--------------ADAAE---- 49 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHH-------------HHHHHhCCCCeEEeCCCC-CCH--------------HHHHH----
Confidence 789999998887765210 000 00111 3567899998 322 23444
Q ss_pred HHHHHHHhCcccCCCCEEEEecccccchHHHHHHH
Q 012362 144 LLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (465)
Q Consensus 144 fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~ 178 (465)
++.++.+... .++++|.|.|.||.++-.+|.+
T Consensus 50 ~l~~l~~~~~---~~~~~lvG~S~Gg~~a~~~a~~ 81 (190)
T PRK11071 50 LLESLVLEHG---GDPLGLVGSSLGGYYATWLSQC 81 (190)
T ss_pred HHHHHHHHcC---CCCeEEEEECHHHHHHHHHHHH
Confidence 4444544432 4689999999999999988865
No 159
>PRK14566 triosephosphate isomerase; Provisional
Probab=57.03 E-value=19 Score=34.67 Aligned_cols=61 Identities=13% Similarity=0.254 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCcc
Q 012362 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (465)
Q Consensus 135 ~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~ 205 (465)
.+.|++++.|+++++...-+.....+=|. |||.--|.-+..|.+. -++.|+.||..-+++.
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~-------~dIDG~LVGgASL~~~ 248 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQ-------PDVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcC-------CCCCeEEechHhcCHH
Confidence 45578899999999975421112234444 9999999999988753 2799999999888874
No 160
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=55.68 E-value=7.2 Score=35.37 Aligned_cols=14 Identities=43% Similarity=0.976 Sum_probs=12.6
Q ss_pred CCEEEEECCCCCcc
Q 012362 67 WPIILWLQGGPGAS 80 (465)
Q Consensus 67 ~pl~lwl~GGPG~s 80 (465)
.|.|||+=|||||-
T Consensus 7 ~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 7 KPPIIFVLGGPGSG 20 (195)
T ss_pred CCCEEEEEcCCCCC
Confidence 48999999999986
No 161
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=55.26 E-value=29 Score=33.20 Aligned_cols=63 Identities=22% Similarity=0.228 Sum_probs=45.9
Q ss_pred CCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccCCcChHH
Q 012362 364 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVDQPCI 443 (465)
Q Consensus 364 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~DqP~~ 443 (465)
..||||++|..|-++|+.-..+.....+= .....+|+||||--..--| .
T Consensus 192 ~~PVLiiHgtdDevv~~sHg~~Lye~~k~------------------------------~~epl~v~g~gH~~~~~~~-~ 240 (258)
T KOG1552|consen 192 TCPVLIIHGTDDEVVDFSHGKALYERCKE------------------------------KVEPLWVKGAGHNDIELYP-E 240 (258)
T ss_pred cCCEEEEecccCceecccccHHHHHhccc------------------------------cCCCcEEecCCCcccccCH-H
Confidence 35999999999999998876666555430 1334679999999876665 5
Q ss_pred HHHHHHHHhcCCCc
Q 012362 444 ALNMLAAMTDSPAS 457 (465)
Q Consensus 444 a~~mi~~fl~~~~~ 457 (465)
-++.+++|+.....
T Consensus 241 yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 241 YIEHLRRFISSVLP 254 (258)
T ss_pred HHHHHHHHHHHhcc
Confidence 66777888776543
No 162
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=53.63 E-value=16 Score=34.04 Aligned_cols=48 Identities=27% Similarity=0.360 Sum_probs=28.8
Q ss_pred CCeEEEEecCCcccCCchh-HHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCccccc
Q 012362 364 GVNVTVYNGQLDVICSTKG-TEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFV 436 (465)
Q Consensus 364 ~irVLiy~Gd~D~i~n~~G-~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmv 436 (465)
+.+||+++|..|.+-|..- .+..+++|+=.+. -.+++.+...+|||+.
T Consensus 115 ~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~-------------------------~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 115 KGPILLISGEDDQIWPSSEMAEQIEERLKAAGF-------------------------PHNVEHLSYPGAGHLI 163 (213)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT------------------------------EEEEETTB-S--
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHHHhCC-------------------------CCcceEEEcCCCCcee
Confidence 5799999999999998765 4455566762110 0157888899999996
No 163
>PLN02162 triacylglycerol lipase
Probab=53.16 E-value=20 Score=37.34 Aligned_cols=40 Identities=18% Similarity=0.262 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHH
Q 012362 139 NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (465)
Q Consensus 139 ~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~ 181 (465)
..+...|+.++.++|. .+++++|||-||-.+-..|..+..
T Consensus 262 ~~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 262 YTIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HHHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHHH
Confidence 3455667777777775 579999999999988887766543
No 164
>PF05436 MF_alpha_N: Mating factor alpha precursor N-terminus; InterPro: IPR008675 This entry contains the N-terminal regions of the Saccharomyces mating factor alpha precursor protein. All proteins in this family contain one or more copies of IPR006742 from INTERPRO further toward their C terminus.; GO: 0007618 mating, 0005576 extracellular region
Probab=52.14 E-value=21 Score=28.00 Aligned_cols=44 Identities=9% Similarity=0.181 Sum_probs=25.5
Q ss_pred hhhHHHHHHHHHHhhhcCCcccccccCCCCCCcee--eeeEeCCCc
Q 012362 4 LCGFVATLLFLVSLLFNGGAAARALNKNQDASEEW--GYVEVRPKA 47 (465)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--Gyv~v~~~~ 47 (465)
|.-+++..+|+...+.+..+...........++++ ||++.++..
T Consensus 3 f~siLsa~ala~~s~~a~~~~~~~~~~~~~iP~EAiiGyLDl~~d~ 48 (86)
T PF05436_consen 3 FSSILSAAALASSSVAAAPVQTTTDDESANIPAEAIIGYLDLGGDN 48 (86)
T ss_pred hHHHHHHHHHHHHHhhcCCcccccccccccCCHHHHhceeccCCCC
Confidence 44455555655555665544444444344555665 999997653
No 165
>PRK10259 hypothetical protein; Provisional
Probab=51.20 E-value=15 Score=28.97 Aligned_cols=44 Identities=18% Similarity=0.139 Sum_probs=27.6
Q ss_pred CcchhhHHHHHHHHHHhhhcCCcccccccCCCCCCceeeeeEeCC
Q 012362 1 MEKLCGFVATLLFLVSLLFNGGAAARALNKNQDASEEWGYVEVRP 45 (465)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGyv~v~~ 45 (465)
||++..+++.|+|.+. .|...+++.++.......+.-|.|.|.+
T Consensus 1 Mk~ik~~~aa~~ls~~-Sf~a~AA~~i~~~q~~~l~kiG~VSvsg 44 (86)
T PRK10259 1 MKTINTVVAAMALSTL-SFGVFAAEPVTASQAQNMNKIGVVSADG 44 (86)
T ss_pred CchHHHHHHHHHHHHh-hhhhcchhhhChHHhcCCCcceEEEEec
Confidence 8889888887777766 3333243434433344556779998863
No 166
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=50.75 E-value=28 Score=32.89 Aligned_cols=66 Identities=27% Similarity=0.260 Sum_probs=41.2
Q ss_pred cccceeecCCCccccccccCCCCcccC-hHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHH
Q 012362 107 KADLLFVDNPVGTGYSYVEDNSSFVKN-DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (465)
Q Consensus 107 ~~n~lyiDqPvGvGfSy~~~~~~~~~s-~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia 176 (465)
-..||-.|-- |+|-|--...+..... .+=+..|+-.+|...=+.-| ..|+|..|+||||+-.=.++
T Consensus 57 Gf~Vlt~dyR-G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~~ 123 (281)
T COG4757 57 GFEVLTFDYR-GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLLG 123 (281)
T ss_pred CceEEEEecc-cccCCCccccccCccchhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeecccc
Confidence 3477888866 8888875433322233 23344556555554433445 58999999999999554443
No 167
>PRK07868 acyl-CoA synthetase; Validated
Probab=48.52 E-value=31 Score=40.00 Aligned_cols=62 Identities=16% Similarity=0.115 Sum_probs=47.3
Q ss_pred CCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEE-EEEcCcccccC---Cc
Q 012362 364 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHF-YWILGAGHFVP---VD 439 (465)
Q Consensus 364 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf-v~V~~AGHmvP---~D 439 (465)
..++|++.|..|.++|....+.+.+.+. +..+ ..+.++|||.+ -.
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i~-------------------------------~a~~~~~~~~~GH~g~~~g~~ 345 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAAP-------------------------------NAEVYESLIRAGHFGLVVGSR 345 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC-------------------------------CCeEEEEeCCCCCEeeeechh
Confidence 5899999999999999998888876653 2222 34689999954 44
Q ss_pred ChHHHHHHHHHHhcCCC
Q 012362 440 QPCIALNMLAAMTDSPA 456 (465)
Q Consensus 440 qP~~a~~mi~~fl~~~~ 456 (465)
-|+.....|.+||+.+.
T Consensus 346 a~~~~wp~i~~wl~~~~ 362 (994)
T PRK07868 346 AAQQTWPTVADWVKWLE 362 (994)
T ss_pred hhhhhChHHHHHHHHhc
Confidence 66777788899998644
No 168
>PLN02429 triosephosphate isomerase
Probab=48.33 E-value=32 Score=34.06 Aligned_cols=62 Identities=16% Similarity=0.215 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHh-CcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCccc
Q 012362 135 VEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (465)
Q Consensus 135 ~~~A~d~~~fL~~F~~~-fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~~ 206 (465)
.+.++.+..++++++.. +.+-....+-|. |||---|.-+..+... -++.|+.||.+.+++..
T Consensus 238 ~e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~-------~diDG~LVGgASL~~~~ 300 (315)
T PLN02429 238 PQQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE-------EDIDGFLVGGASLKGPE 300 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC-------CCCCEEEeecceecHHH
Confidence 35577789999999874 333222344444 9999999988887652 37999999999988743
No 169
>PLN03037 lipase class 3 family protein; Provisional
Probab=48.10 E-value=29 Score=36.65 Aligned_cols=46 Identities=22% Similarity=0.218 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHhCccc-CCCCEEEEecccccchHHHHHHHHHH
Q 012362 136 EAANDLTTLLMELFNKNEIL-QKSPLFIVAESYGGKFAATLGLAAVK 181 (465)
Q Consensus 136 ~~A~d~~~fL~~F~~~fP~~-~~~~~~I~GESYgG~YvP~ia~~i~~ 181 (465)
.+.+++...++...+.+++. ....++|+|||.||-.+-..|..|..
T Consensus 295 SareQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~ 341 (525)
T PLN03037 295 SASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAAR 341 (525)
T ss_pred hhHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHH
Confidence 45567777788888777642 24579999999999998887766654
No 170
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=46.62 E-value=48 Score=25.43 Aligned_cols=77 Identities=19% Similarity=0.317 Sum_probs=48.2
Q ss_pred eEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccccccccCC
Q 012362 48 HMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDN 127 (465)
Q Consensus 48 ~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~ 127 (465)
.||+..++.+ ++ .+.+|+.++|--..|.. + .|..... + .+-.+|+-+|+. |.|.|-+..
T Consensus 3 ~L~~~~w~p~----~~--~k~~v~i~HG~~eh~~r-y---~~~a~~L-----~----~~G~~V~~~D~r-GhG~S~g~r- 61 (79)
T PF12146_consen 3 KLFYRRWKPE----NP--PKAVVVIVHGFGEHSGR-Y---AHLAEFL-----A----EQGYAVFAYDHR-GHGRSEGKR- 61 (79)
T ss_pred EEEEEEecCC----CC--CCEEEEEeCCcHHHHHH-H---HHHHHHH-----H----hCCCEEEEECCC-cCCCCCCcc-
Confidence 5777777642 22 24899999976444432 3 2221111 1 144578889988 999997543
Q ss_pred CCcccChHHHHHHHHHHHH
Q 012362 128 SSFVKNDVEAANDLTTLLM 146 (465)
Q Consensus 128 ~~~~~s~~~~A~d~~~fL~ 146 (465)
....+-++..+|+..|++
T Consensus 62 -g~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 62 -GHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred -cccCCHHHHHHHHHHHhC
Confidence 346677888888877764
No 171
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=46.52 E-value=23 Score=32.42 Aligned_cols=62 Identities=19% Similarity=0.207 Sum_probs=38.8
Q ss_pred ceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHH
Q 012362 110 LLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAA 179 (465)
Q Consensus 110 ~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i 179 (465)
.|-.|-- |||-|-++-+.. ..+.+-|....++|+ .++|+- ..+.++|-|+|+..+-.+|.+.
T Consensus 63 tlRfNfR-gVG~S~G~fD~G--iGE~~Da~aaldW~~---~~hp~s--~~~~l~GfSFGa~Ia~~la~r~ 124 (210)
T COG2945 63 TLRFNFR-GVGRSQGEFDNG--IGELEDAAAALDWLQ---ARHPDS--ASCWLAGFSFGAYIAMQLAMRR 124 (210)
T ss_pred EEeeccc-ccccccCcccCC--cchHHHHHHHHHHHH---hhCCCc--hhhhhcccchHHHHHHHHHHhc
Confidence 3444533 999998864332 233333444445555 468873 3479999999987776666654
No 172
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=44.96 E-value=47 Score=31.35 Aligned_cols=61 Identities=23% Similarity=0.348 Sum_probs=45.1
Q ss_pred CeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccCCcChH--
Q 012362 365 VNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVDQPC-- 442 (465)
Q Consensus 365 irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~DqP~-- 442 (465)
.++|+.+|..|.+++..-.+.......= .....+.+.+++|....+.+.
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~H~~~~~~~~~~ 283 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARE-----------------------------RPKKLLFVPGGGHIDLYDNPPAV 283 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhcc-----------------------------CCceEEEecCCccccccCccHHH
Confidence 7999999999999998777776666430 034557788888999986666
Q ss_pred -HHHHHHHHHhcC
Q 012362 443 -IALNMLAAMTDS 454 (465)
Q Consensus 443 -~a~~mi~~fl~~ 454 (465)
.++.-+.+|+..
T Consensus 284 ~~~~~~~~~f~~~ 296 (299)
T COG1073 284 EQALDKLAEFLER 296 (299)
T ss_pred HHHHHHHHHHHHH
Confidence 566666666654
No 173
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=44.93 E-value=37 Score=34.05 Aligned_cols=60 Identities=18% Similarity=0.232 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCC
Q 012362 139 NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (465)
Q Consensus 139 ~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~ 203 (465)
.++.+-++.....+| +..++++|+|-||-++...|..|...... ...+++=+--|-|-+.
T Consensus 155 ~~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~--~~~~v~v~tFG~PRvG 214 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK--TSSPVKVYTFGQPRVG 214 (336)
T ss_pred HHHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC--CCCceEEEEecCCCcc
Confidence 445555666666777 56899999999999999999998763211 1234555555555554
No 174
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=44.50 E-value=40 Score=30.19 Aligned_cols=43 Identities=16% Similarity=0.226 Sum_probs=33.6
Q ss_pred CeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccCCc
Q 012362 365 VNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVD 439 (465)
Q Consensus 365 irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~D 439 (465)
++.+++.++.|..|++.-++++.+.++ ..++.+.++||+-..+
T Consensus 115 ~~~~viaS~nDp~vp~~~a~~~A~~l~--------------------------------a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 115 FPSIVIASDNDPYVPFERAQRLAQRLG--------------------------------AELIILGGGGHFNAAS 157 (171)
T ss_dssp CCEEEEEETTBSSS-HHHHHHHHHHHT---------------------------------EEEEETS-TTSSGGG
T ss_pred CCeEEEEcCCCCccCHHHHHHHHHHcC--------------------------------CCeEECCCCCCccccc
Confidence 455899999999999999999998874 4567899999997654
No 175
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=43.87 E-value=2.5e+02 Score=28.37 Aligned_cols=96 Identities=21% Similarity=0.315 Sum_probs=63.7
Q ss_pred CCEEEEECCCCCccccccccccccCCCc--ccCCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHH
Q 012362 67 WPIILWLQGGPGASGVGIGNFEEVGPFD--TYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144 (465)
Q Consensus 67 ~pl~lwl~GGPG~sS~~~g~f~E~GP~~--~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~f 144 (465)
+-|||..-|.-| |.|+|=.. +.+.+..-.|| .| |-+=|. +..++.++..+++.+.+|
T Consensus 243 q~LvIC~EGNAG--------FYEvG~m~tP~~lgYsvLGwN---------hP-GFagST---G~P~p~n~~nA~DaVvQf 301 (517)
T KOG1553|consen 243 QDLVICFEGNAG--------FYEVGVMNTPAQLGYSVLGWN---------HP-GFAGST---GLPYPVNTLNAADAVVQF 301 (517)
T ss_pred ceEEEEecCCcc--------ceEeeeecChHHhCceeeccC---------CC-CccccC---CCCCcccchHHHHHHHHH
Confidence 368887776543 55666443 12333344566 36 544443 345678888888877766
Q ss_pred HHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEc
Q 012362 145 LMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVAL 197 (465)
Q Consensus 145 L~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~I 197 (465)
-.+-+ .|+..++.|.|-|-||.-+...|.- .-++|++++
T Consensus 302 AI~~L----gf~~edIilygWSIGGF~~~waAs~----------YPdVkavvL 340 (517)
T KOG1553|consen 302 AIQVL----GFRQEDIILYGWSIGGFPVAWAASN----------YPDVKAVVL 340 (517)
T ss_pred HHHHc----CCCccceEEEEeecCCchHHHHhhc----------CCCceEEEe
Confidence 55443 5667899999999999988877753 337899988
No 176
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=43.73 E-value=24 Score=32.62 Aligned_cols=49 Identities=18% Similarity=0.217 Sum_probs=31.3
Q ss_pred CCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccCCcChHH
Q 012362 364 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVDQPCI 443 (465)
Q Consensus 364 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~DqP~~ 443 (465)
.+++|-+.|..|.+++...++...+... .. +-+.....||.||...+..
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~------------------------------~~-~~v~~h~gGH~vP~~~~~~ 209 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFD------------------------------PD-ARVIEHDGGHHVPRKKEDV 209 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHH------------------------------HH-EEEEEESSSSS----HHHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhcc------------------------------CC-cEEEEECCCCcCcCChhhc
Confidence 5899999999999999887777776643 01 3466788999999987653
No 177
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=43.35 E-value=55 Score=32.58 Aligned_cols=56 Identities=11% Similarity=0.087 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCC
Q 012362 137 AANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (465)
Q Consensus 137 ~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~ 203 (465)
+..|.+.++. |+...|+.-.+.+.++|+|-||...-..|. +.+ .++.++...|++.
T Consensus 155 ~~~D~~ravd-~l~slpevD~~rI~v~G~SqGG~lal~~aa-Ld~---------rv~~~~~~vP~l~ 210 (320)
T PF05448_consen 155 VYLDAVRAVD-FLRSLPEVDGKRIGVTGGSQGGGLALAAAA-LDP---------RVKAAAADVPFLC 210 (320)
T ss_dssp HHHHHHHHHH-HHHTSTTEEEEEEEEEEETHHHHHHHHHHH-HSS---------T-SEEEEESESSS
T ss_pred HHHHHHHHHH-HHHhCCCcCcceEEEEeecCchHHHHHHHH-hCc---------cccEEEecCCCcc
Confidence 3456666665 667789887889999999999997776664 211 5788888666553
No 178
>PLN02561 triosephosphate isomerase
Probab=43.02 E-value=42 Score=32.24 Aligned_cols=61 Identities=16% Similarity=0.235 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHHHHHHHh-CcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCc
Q 012362 134 DVEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (465)
Q Consensus 134 ~~~~A~d~~~fL~~F~~~-fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p 204 (465)
+.+-++++..++++++.+ +..-....+-|. |||.--|.-+..+... .++.|+.||.+-+++
T Consensus 178 s~~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~-------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 178 TPAQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ-------PDVDGFLVGGASLKP 239 (253)
T ss_pred CHHHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC-------CCCCeEEEehHhhHH
Confidence 335677789999998864 433223445454 9999999988887652 379999999998886
No 179
>PLN02442 S-formylglutathione hydrolase
Probab=41.94 E-value=46 Score=32.27 Aligned_cols=48 Identities=17% Similarity=0.160 Sum_probs=35.8
Q ss_pred cCCeEEEEecCCcccCCch-hHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccC
Q 012362 363 KGVNVTVYNGQLDVICSTK-GTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVP 437 (465)
Q Consensus 363 ~~irVLiy~Gd~D~i~n~~-G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP 437 (465)
.+.+||+.+|+.|.+|+.. .++.+.+.++ + .| .+.++.+..|++|-.+
T Consensus 216 ~~~pvli~~G~~D~~v~~~~~s~~~~~~l~--------~--------------~g-----~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 216 VSATILIDQGEADKFLKEQLLPENFEEACK--------E--------------AG-----APVTLRLQPGYDHSYF 264 (283)
T ss_pred cCCCEEEEECCCCccccccccHHHHHHHHH--------H--------------cC-----CCeEEEEeCCCCccHH
Confidence 4689999999999999874 4666766654 0 11 1578888999999755
No 180
>PLN02847 triacylglycerol lipase
Probab=41.89 E-value=36 Score=36.66 Aligned_cols=63 Identities=19% Similarity=0.102 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCC-CCCcc
Q 012362 136 EAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS-WISPE 205 (465)
Q Consensus 136 ~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg-~~~p~ 205 (465)
.+.+.+...|++-+..+|.| ++.|+|||.||--+-.++..+.+ +. ..-+++.+..|-| +++..
T Consensus 232 wI~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe-~~---~fssi~CyAFgPp~cvS~e 295 (633)
T PLN02847 232 WIAKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILRE-QK---EFSSTTCVTFAPAACMTWD 295 (633)
T ss_pred HHHHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhc-CC---CCCCceEEEecCchhcCHH
Confidence 34444444555666667764 79999999999987777654432 11 1225667777753 55543
No 181
>COG5510 Predicted small secreted protein [Function unknown]
Probab=41.40 E-value=22 Score=24.01 Aligned_cols=21 Identities=29% Similarity=0.297 Sum_probs=14.4
Q ss_pred CcchhhHHHHHHHHHHhhhcC
Q 012362 1 MEKLCGFVATLLFLVSLLFNG 21 (465)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~ 21 (465)
||+...++++++++..+|++|
T Consensus 2 mk~t~l~i~~vll~s~llaaC 22 (44)
T COG5510 2 MKKTILLIALVLLASTLLAAC 22 (44)
T ss_pred chHHHHHHHHHHHHHHHHHHh
Confidence 677666666666666666666
No 182
>KOG3101 consensus Esterase D [General function prediction only]
Probab=41.03 E-value=28 Score=32.44 Aligned_cols=41 Identities=24% Similarity=0.135 Sum_probs=24.6
Q ss_pred CCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCcccc
Q 012362 158 SPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF 207 (465)
Q Consensus 158 ~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~~~ 207 (465)
.+.-|+|+|.|||=+..++.+-. -..|++.--.|.++|...
T Consensus 141 ~k~~IfGHSMGGhGAl~~~Lkn~---------~kykSvSAFAPI~NP~~c 181 (283)
T KOG3101|consen 141 LKVGIFGHSMGGHGALTIYLKNP---------SKYKSVSAFAPICNPINC 181 (283)
T ss_pred hhcceeccccCCCceEEEEEcCc---------ccccceeccccccCcccC
Confidence 45899999999995544432211 134566655566666543
No 183
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=39.54 E-value=53 Score=29.60 Aligned_cols=81 Identities=15% Similarity=0.179 Sum_probs=51.6
Q ss_pred cceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHH--HHHHHHcC
Q 012362 109 DLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA--AVKAIEAG 186 (465)
Q Consensus 109 n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~--i~~~~~~~ 186 (465)
.+--|+-|+..+.. .+..+..+.+.++...++.+..+-| +.+|.|+|-|=|+.-+-..+.. +...
T Consensus 41 ~~~~V~YpA~~~~~------~y~~S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~~~l~~~---- 107 (179)
T PF01083_consen 41 AVQGVEYPASLGPN------SYGDSVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSGDGLPPD---- 107 (179)
T ss_dssp EEEE--S---SCGG------SCHHHHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHTTSSHH----
T ss_pred EEEecCCCCCCCcc------cccccHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHhccCChh----
Confidence 34446677776662 1345677888889999999999998 4799999999998877766555 1111
Q ss_pred cceeeeee-EEccCCCCC
Q 012362 187 KLKLKLGG-VALGDSWIS 203 (465)
Q Consensus 187 ~~~inLkG-i~IGNg~~~ 203 (465)
..-++.+ +.+|||.-.
T Consensus 108 -~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 108 -VADRIAAVVLFGDPRRG 124 (179)
T ss_dssp -HHHHEEEEEEES-TTTB
T ss_pred -hhhhEEEEEEecCCccc
Confidence 0115666 577887664
No 184
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=39.40 E-value=42 Score=30.30 Aligned_cols=62 Identities=16% Similarity=0.101 Sum_probs=38.5
Q ss_pred ccccceeecCCCc--cccccccCCCCcccChHHHHHHHHHHHHHHHHhC-cccCCCCEEEEecccccchHHHH
Q 012362 106 KKADLLFVDNPVG--TGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKN-EILQKSPLFIVAESYGGKFAATL 175 (465)
Q Consensus 106 ~~~n~lyiDqPvG--vGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~f-P~~~~~~~~I~GESYgG~YvP~i 175 (465)
+.+-|.|++-... ...+-.. ..--+..|.+|-.|++.+=..+ | .-.+-+.|||||..-+-.-
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~~-----~~~A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A 126 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAAS-----PGYARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLA 126 (177)
T ss_pred CeEEEEEcCCCCCCCccccccC-----chHHHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHH
Confidence 6778888855444 2222111 1224566777777777765555 3 3579999999997654443
No 185
>PRK07868 acyl-CoA synthetase; Validated
Probab=38.53 E-value=82 Score=36.60 Aligned_cols=90 Identities=14% Similarity=0.105 Sum_probs=47.9
Q ss_pred CCCEEEEECCCCCccccccccccccCCCcccCCCCC-Cc---hh-cc-ccceeecCCCccccccccCCCCcccChHHHHH
Q 012362 66 PWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRN-ST---WL-KK-ADLLFVDNPVGTGYSYVEDNSSFVKNDVEAAN 139 (465)
Q Consensus 66 ~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~l~~~~-~s---w~-~~-~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~ 139 (465)
..|.||.++|-+..+.++ +..+ .| |. +. ..++-+| -|.|-..+. ....+..+.+.
T Consensus 66 ~~~plllvhg~~~~~~~~--------------d~~~~~s~v~~L~~~g~~v~~~d----~G~~~~~~~-~~~~~l~~~i~ 126 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMW--------------DVTRDDGAVGILHRAGLDPWVID----FGSPDKVEG-GMERNLADHVV 126 (994)
T ss_pred CCCcEEEECCCCCCccce--------------ecCCcccHHHHHHHCCCEEEEEc----CCCCChhHc-CccCCHHHHHH
Confidence 348899999987666552 1111 11 22 22 4677778 244421111 11123333333
Q ss_pred HHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHH
Q 012362 140 DLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (465)
Q Consensus 140 d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~ 178 (465)
.+.++|..-- +....+++|.|.|.||..+-.++..
T Consensus 127 ~l~~~l~~v~----~~~~~~v~lvG~s~GG~~a~~~aa~ 161 (994)
T PRK07868 127 ALSEAIDTVK----DVTGRDVHLVGYSQGGMFCYQAAAY 161 (994)
T ss_pred HHHHHHHHHH----HhhCCceEEEEEChhHHHHHHHHHh
Confidence 3344433211 1224589999999999988777653
No 186
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=37.56 E-value=48 Score=33.96 Aligned_cols=41 Identities=20% Similarity=0.147 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHH
Q 012362 140 DLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAV 180 (465)
Q Consensus 140 d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~ 180 (465)
+.+.-|++..+.--+..++++.|.|||+||-++-.+-....
T Consensus 101 ~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhcc
Confidence 44445555554322223789999999999999988776653
No 187
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=36.87 E-value=47 Score=34.57 Aligned_cols=73 Identities=11% Similarity=0.109 Sum_probs=47.5
Q ss_pred CeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEE---CCeEEEEEcCcc---cccCC
Q 012362 365 VNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSY---KNLHFYWILGAG---HFVPV 438 (465)
Q Consensus 365 irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~---~nLtfv~V~~AG---HmvP~ 438 (465)
++=-++.||=|-.+|.... .|-. +|.|.+.+ ++- + +.+.+ ..+.+....|+- |+--.
T Consensus 374 ~~~~~~~~DGDgTVp~~S~-~~c~--~w~g~~~~--~~~-----------~-~~~~~~~~~~~~~~~~~G~~~a~Hv~il 436 (473)
T KOG2369|consen 374 LKGGIFYGDGDGTVPLVSA-SMCA--NWQGKQFN--AGI-----------A-VTREEDKHQPVNLDESHGSSSAEHVDIL 436 (473)
T ss_pred ccCceeecCCCCccchHHH-Hhhh--hhhccccc--ccc-----------c-cccccccCCCccccccCCccchhhhhhc
Confidence 4445888999999999998 4444 89888766 221 1 22222 247777777776 87666
Q ss_pred cChHHHHHHHHHHhcCC
Q 012362 439 DQPCIALNMLAAMTDSP 455 (465)
Q Consensus 439 DqP~~a~~mi~~fl~~~ 455 (465)
-.+ +.++.|.+.+.+.
T Consensus 437 g~~-~l~e~i~k~~~g~ 452 (473)
T KOG2369|consen 437 GDE-ELLEEILKVLLGA 452 (473)
T ss_pred cCh-HHHHHHHHHhccC
Confidence 655 5566666666553
No 188
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=36.44 E-value=58 Score=31.01 Aligned_cols=60 Identities=18% Similarity=0.338 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHh-CcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCccc
Q 012362 136 EAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (465)
Q Consensus 136 ~~A~d~~~fL~~F~~~-fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~~ 206 (465)
+.++++..++++++.. +.+ ....+-|. |||---|.=+..+.+. -++.|+.||.+.+++..
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~-------~~vDG~LVG~Asl~~~~ 236 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQ-------PDIDGVLVGGASLKAES 236 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcC-------CCCCEEEeehHhhCHHH
Confidence 4567788999998864 433 23344444 9999999888877652 15999999999887643
No 189
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=36.31 E-value=85 Score=29.43 Aligned_cols=58 Identities=17% Similarity=0.217 Sum_probs=41.8
Q ss_pred CCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccCCcCh--
Q 012362 364 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVDQP-- 441 (465)
Q Consensus 364 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~DqP-- 441 (465)
.++.|-+-|+.|.+++..-.+...+... + . .+...-+||+||.-.|
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~~------------------~------------a--~vl~HpggH~VP~~~~~~ 210 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESFK------------------D------------A--TVLEHPGGHIVPNKAKYK 210 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhcC------------------C------------C--eEEecCCCccCCCchHHH
Confidence 4789999999999999887777777643 0 1 4668889999998764
Q ss_pred HHHHHHHHHHhc
Q 012362 442 CIALNMLAAMTD 453 (465)
Q Consensus 442 ~~a~~mi~~fl~ 453 (465)
+...+.|+.+++
T Consensus 211 ~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 211 EKIADFIQSFLQ 222 (230)
T ss_pred HHHHHHHHHHHH
Confidence 334455555543
No 190
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=36.15 E-value=72 Score=30.57 Aligned_cols=61 Identities=16% Similarity=0.308 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHh-CcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCccc
Q 012362 135 VEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (465)
Q Consensus 135 ~~~A~d~~~fL~~F~~~-fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~~ 206 (465)
.+-++++..++++++.. +. -....+-|. |||---|.-+..+... -++.|+.||.+.+++.+
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~-------~~vDG~LVG~Asl~~~~ 240 (250)
T PRK00042 179 PEQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ-------PDIDGALVGGASLKAED 240 (250)
T ss_pred HHHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC-------CCCCEEEEeeeeechHH
Confidence 35677799999998863 32 112344444 9999999988887652 37999999999988743
No 191
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=34.04 E-value=1.7e+02 Score=26.61 Aligned_cols=62 Identities=26% Similarity=0.230 Sum_probs=36.8
Q ss_pred cCCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccc--c---C
Q 012362 363 KGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHF--V---P 437 (465)
Q Consensus 363 ~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHm--v---P 437 (465)
...+||+..|..|..++....+...+.|+=.+ ..+.+.+..||+|= . +
T Consensus 144 ~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~---------------------------~~~~~~~y~ga~HgF~~~~~~ 196 (218)
T PF01738_consen 144 IKAPVLILFGENDPFFPPEEVEALEEALKAAG---------------------------VDVEVHVYPGAGHGFANPSRP 196 (218)
T ss_dssp --S-EEEEEETT-TTS-HHHHHHHHHHHHCTT---------------------------TTEEEEEETT--TTTTSTTST
T ss_pred cCCCEeecCccCCCCCChHHHHHHHHHHHhcC---------------------------CcEEEEECCCCcccccCCCCc
Confidence 36899999999999999999888888884110 14667778889885 2 2
Q ss_pred CcChHHHHHHHHHH
Q 012362 438 VDQPCIALNMLAAM 451 (465)
Q Consensus 438 ~DqP~~a~~mi~~f 451 (465)
.++++++-+..++.
T Consensus 197 ~~~~~aa~~a~~~~ 210 (218)
T PF01738_consen 197 PYDPAAAEDAWQRT 210 (218)
T ss_dssp T--HHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHH
Confidence 33455555544443
No 192
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=34.04 E-value=29 Score=30.92 Aligned_cols=26 Identities=31% Similarity=0.474 Sum_probs=22.0
Q ss_pred cCCCCEEEEecccccchHHHHHHHHH
Q 012362 155 LQKSPLFIVAESYGGKFAATLGLAAV 180 (465)
Q Consensus 155 ~~~~~~~I~GESYgG~YvP~ia~~i~ 180 (465)
...-|+.|-|.||||+....+|..+.
T Consensus 86 l~~gpLi~GGkSmGGR~aSmvade~~ 111 (213)
T COG3571 86 LAEGPLIIGGKSMGGRVASMVADELQ 111 (213)
T ss_pred ccCCceeeccccccchHHHHHHHhhc
Confidence 33568999999999999999987764
No 193
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=33.59 E-value=1.2e+02 Score=32.48 Aligned_cols=33 Identities=9% Similarity=0.009 Sum_probs=22.2
Q ss_pred HHHHHHHHhCcccCCCCEEEEecccccchHHHHH
Q 012362 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (465)
Q Consensus 143 ~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia 176 (465)
+++++....|-. -.+++-|+|+|.||..|-.+.
T Consensus 181 ~wv~~~I~~FGG-dp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 181 RWVKDNIPSFGG-DPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHhcCC-CCCeEEEEeechhHHHHHHHh
Confidence 444444444542 136799999999999886654
No 194
>PTZ00333 triosephosphate isomerase; Provisional
Probab=33.57 E-value=69 Score=30.76 Aligned_cols=61 Identities=16% Similarity=0.284 Sum_probs=44.3
Q ss_pred hHHHHHHHHHHHHHHHHh-CcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCc
Q 012362 134 DVEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (465)
Q Consensus 134 ~~~~A~d~~~fL~~F~~~-fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p 204 (465)
+.+.+++++.++++++.. +........-|. |||.--|.-+..+... -++.|+.||.+.+++
T Consensus 181 ~~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~-------~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 181 TPEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQ-------PDIDGFLVGGASLKP 242 (255)
T ss_pred CHHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcC-------CCCCEEEEehHhhhh
Confidence 446677899999998863 433223344444 9999999998887652 379999999988764
No 195
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=33.50 E-value=25 Score=35.89 Aligned_cols=39 Identities=23% Similarity=0.307 Sum_probs=23.9
Q ss_pred CCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCccc
Q 012362 158 SPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (465)
Q Consensus 158 ~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~~ 206 (465)
..+.++||||||--+-..+..- ..++..++-+||+-|..
T Consensus 228 ~~i~~~GHSFGGATa~~~l~~d----------~r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 228 SRIGLAGHSFGGATALQALRQD----------TRFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-----------TT--EEEEES---TTS-
T ss_pred hheeeeecCchHHHHHHHHhhc----------cCcceEEEeCCcccCCC
Confidence 3599999999998666443221 26788889999998864
No 196
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=33.03 E-value=26 Score=34.13 Aligned_cols=117 Identities=16% Similarity=0.107 Sum_probs=58.0
Q ss_pred CCCCCCCEEEEECC-CCCccccccccccccCCCcccCCCCCCchhccccceeecCCCccccccccC-CCCcccChHHHHH
Q 012362 62 NPSKPWPIILWLQG-GPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVED-NSSFVKNDVEAAN 139 (465)
Q Consensus 62 ~~~~~~pl~lwl~G-GPG~sS~~~g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~-~~~~~~s~~~~A~ 139 (465)
+++..+|.+|=.+- |.-.-|-.-++|.- |. -..-.+..-++=||-| |-..--..- .++...|.++.|+
T Consensus 18 ~~~~~kp~ilT~HDvGlNh~scF~~ff~~--~~-------m~~i~~~f~i~Hi~aP-Gqe~ga~~~p~~y~yPsmd~LAe 87 (283)
T PF03096_consen 18 DPKGNKPAILTYHDVGLNHKSCFQGFFNF--ED-------MQEILQNFCIYHIDAP-GQEEGAATLPEGYQYPSMDQLAE 87 (283)
T ss_dssp S--TTS-EEEEE--TT--HHHHCHHHHCS--HH-------HHHHHTTSEEEEEE-T-TTSTT-----TT-----HHHHHC
T ss_pred cCCCCCceEEEeccccccchHHHHHHhcc--hh-------HHHHhhceEEEEEeCC-CCCCCcccccccccccCHHHHHH
Confidence 34334588888885 44444411233321 11 1345667778889988 665432221 1223458899999
Q ss_pred HHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCc
Q 012362 140 DLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (465)
Q Consensus 140 d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p 204 (465)
++-+.|..| . =+.+.-+|+-=|+....-+|..-. =.+-|+++-|+....
T Consensus 88 ~l~~Vl~~f-----~--lk~vIg~GvGAGAnIL~rfAl~~p---------~~V~GLiLvn~~~~~ 136 (283)
T PF03096_consen 88 MLPEVLDHF-----G--LKSVIGFGVGAGANILARFALKHP---------ERVLGLILVNPTCTA 136 (283)
T ss_dssp THHHHHHHH-----T-----EEEEEETHHHHHHHHHHHHSG---------GGEEEEEEES---S-
T ss_pred HHHHHHHhC-----C--ccEEEEEeeccchhhhhhccccCc---------cceeEEEEEecCCCC
Confidence 998888855 2 356888898876655555653221 158899997765543
No 197
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=32.72 E-value=1e+02 Score=28.99 Aligned_cols=33 Identities=27% Similarity=0.378 Sum_probs=28.1
Q ss_pred HHHhcCCeEEEEecCCcccCCchhHHHHHHHcC
Q 012362 359 ELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLK 391 (465)
Q Consensus 359 ~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~ 391 (465)
.+-+-..+||+..|+.|-+||.....+|-+.++
T Consensus 159 D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk 191 (242)
T KOG3043|consen 159 DIANVKAPILFLFAELDEDVPPKDVKAWEEKLK 191 (242)
T ss_pred HHhcCCCCEEEEeecccccCCHHHHHHHHHHHh
Confidence 333345899999999999999999999998886
No 198
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=32.37 E-value=81 Score=29.54 Aligned_cols=42 Identities=17% Similarity=0.149 Sum_probs=27.1
Q ss_pred hHHHHHHHHHHHHHHHHhC--cccCCCCEEEEecccccchHHHH
Q 012362 134 DVEAANDLTTLLMELFNKN--EILQKSPLFIVAESYGGKFAATL 175 (465)
Q Consensus 134 ~~~~A~d~~~fL~~F~~~f--P~~~~~~~~I~GESYgG~YvP~i 175 (465)
..+.++.+-+.++...+.+ ..-..+++.|.|||.||.-+-.+
T Consensus 59 l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~ 102 (225)
T PF07819_consen 59 LQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSA 102 (225)
T ss_pred HHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHH
Confidence 3355666666666666554 12236899999999999744433
No 199
>PF14020 DUF4236: Protein of unknown function (DUF4236)
Probab=32.14 E-value=25 Score=25.17 Aligned_cols=15 Identities=47% Similarity=0.578 Sum_probs=11.9
Q ss_pred cceeecCCCccccccc
Q 012362 109 DLLFVDNPVGTGYSYV 124 (465)
Q Consensus 109 n~lyiDqPvGvGfSy~ 124 (465)
..+.++-| |+|+||.
T Consensus 40 ~~~t~~iP-GtGlsyr 54 (55)
T PF14020_consen 40 RRTTVGIP-GTGLSYR 54 (55)
T ss_pred cEEEEEcC-CCccEEe
Confidence 44678889 9999984
No 200
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=31.68 E-value=96 Score=29.49 Aligned_cols=60 Identities=22% Similarity=0.313 Sum_probs=45.7
Q ss_pred CCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccCCcChHH
Q 012362 364 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVDQPCI 443 (465)
Q Consensus 364 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~DqP~~ 443 (465)
..+|.++.|+.|.+|.+.-...|-+..+ +.++ +.+...|||-+.+|.+.
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t~------------------------------~~f~-l~~fdGgHFfl~~~~~~ 224 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHTK------------------------------GDFT-LRVFDGGHFFLNQQREE 224 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhhc------------------------------CCce-EEEecCcceehhhhHHH
Confidence 5799999999999998776666655432 0222 34667799999999999
Q ss_pred HHHHHHHHhcC
Q 012362 444 ALNMLAAMTDS 454 (465)
Q Consensus 444 a~~mi~~fl~~ 454 (465)
....|.+.+.-
T Consensus 225 v~~~i~~~l~~ 235 (244)
T COG3208 225 VLARLEQHLAH 235 (244)
T ss_pred HHHHHHHHhhh
Confidence 99988888753
No 201
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=31.55 E-value=43 Score=31.39 Aligned_cols=27 Identities=15% Similarity=0.377 Sum_probs=23.5
Q ss_pred CCeEEEEecCCcccCCchhHHHHHHHc
Q 012362 364 GVNVTVYNGQLDVICSTKGTEAWIEKL 390 (465)
Q Consensus 364 ~irVLiy~Gd~D~i~n~~G~~~~i~~L 390 (465)
+++++|++|+.|.+|+....++.++++
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHH
Confidence 578999999999999999888887763
No 202
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=31.48 E-value=40 Score=28.70 Aligned_cols=14 Identities=29% Similarity=0.577 Sum_probs=12.0
Q ss_pred CCEEEEECCCCCcc
Q 012362 67 WPIILWLQGGPGAS 80 (465)
Q Consensus 67 ~pl~lwl~GGPG~s 80 (465)
+||||=++|.||+.
T Consensus 52 KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 52 KPLVLSFHGWTGTG 65 (127)
T ss_pred CCEEEEeecCCCCc
Confidence 49999999988875
No 203
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=31.40 E-value=48 Score=30.45 Aligned_cols=43 Identities=21% Similarity=0.325 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHH
Q 012362 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGL 177 (465)
Q Consensus 134 ~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~ 177 (465)
.+.+..++..++ .++...|+....++-++|-|+||+++-.+|.
T Consensus 75 ~~~~~~~~~aa~-~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~ 117 (218)
T PF01738_consen 75 PEQVAADLQAAV-DYLRAQPEVDPGKIGVVGFCWGGKLALLLAA 117 (218)
T ss_dssp HHHHHHHHHHHH-HHHHCTTTCEEEEEEEEEETHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-HHHHhccccCCCcEEEEEEecchHHhhhhhh
Confidence 345556554444 4667777656789999999999998877663
No 204
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=30.94 E-value=41 Score=26.35 Aligned_cols=28 Identities=7% Similarity=0.150 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhCcccCCCCEEEEecccc
Q 012362 139 NDLTTLLMELFNKNEILQKSPLFIVAESYG 168 (465)
Q Consensus 139 ~d~~~fL~~F~~~fP~~~~~~~~I~GESYg 168 (465)
-|+|++.+.|+-++ |-.+.|.+-|+||+
T Consensus 7 vdIYDAvRaflLr~--Y~~KrfIV~g~S~~ 34 (100)
T PF07389_consen 7 VDIYDAVRAFLLRH--YYDKRFIVYGRSNA 34 (100)
T ss_pred hhHHHHHHHHHHHH--HccceEEEecchHH
Confidence 46888999988776 44788999999995
No 205
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=30.33 E-value=39 Score=30.99 Aligned_cols=58 Identities=21% Similarity=0.231 Sum_probs=39.3
Q ss_pred cCCeEEEEecCCcccCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeEEEEEECCeEEEEEcCcccccCCcChH
Q 012362 363 KGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFVPVDQPC 442 (465)
Q Consensus 363 ~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtfv~V~~AGHmvP~DqP~ 442 (465)
--.++++.+|+.|-++ .+...++|... ..++.+++.+|.|+-.-.-.
T Consensus 148 ~P~~~lvi~g~~Ddvv------~l~~~l~~~~~--------------------------~~~~~i~i~~a~HFF~gKl~- 194 (210)
T COG2945 148 CPSPGLVIQGDADDVV------DLVAVLKWQES--------------------------IKITVITIPGADHFFHGKLI- 194 (210)
T ss_pred CCCCceeEecChhhhh------cHHHHHHhhcC--------------------------CCCceEEecCCCceecccHH-
Confidence 3578999999999554 56666766321 24678999999999765544
Q ss_pred HHHHHHHHHhc
Q 012362 443 IALNMLAAMTD 453 (465)
Q Consensus 443 ~a~~mi~~fl~ 453 (465)
...+.+..|+.
T Consensus 195 ~l~~~i~~~l~ 205 (210)
T COG2945 195 ELRDTIADFLE 205 (210)
T ss_pred HHHHHHHHHhh
Confidence 44455555553
No 206
>PRK14565 triosephosphate isomerase; Provisional
Probab=30.20 E-value=82 Score=29.93 Aligned_cols=55 Identities=18% Similarity=0.230 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCccc
Q 012362 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (465)
Q Consensus 134 ~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~~ 206 (465)
+.+.+++++.+++++. .+.-|. |||.--|.-+..+.+. -++.|+.||.+.+++..
T Consensus 172 ~~e~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~~-------~~iDG~LvG~asl~~~~ 226 (237)
T PRK14565 172 SNDAIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKSI-------NQLSGVLVGSASLDVDS 226 (237)
T ss_pred CHHHHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhcC-------CCCCEEEEechhhcHHH
Confidence 4456777889999862 223333 9999999988887752 27999999999998743
No 207
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=29.52 E-value=36 Score=33.06 Aligned_cols=34 Identities=26% Similarity=0.380 Sum_probs=22.7
Q ss_pred HHHHHHHHhCcccCCCCEEEEecccccchHHHHH
Q 012362 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (465)
Q Consensus 143 ~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia 176 (465)
..|..|...-..|....++++|+|-||..+..+.
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG 294 (425)
T COG5153 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLLG 294 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHhc
Confidence 3344444444455568899999999998665554
No 208
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=29.52 E-value=36 Score=33.06 Aligned_cols=34 Identities=26% Similarity=0.380 Sum_probs=22.7
Q ss_pred HHHHHHHHhCcccCCCCEEEEecccccchHHHHH
Q 012362 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (465)
Q Consensus 143 ~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia 176 (465)
..|..|...-..|....++++|+|-||..+..+.
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG 294 (425)
T KOG4540|consen 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLLG 294 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHhc
Confidence 3344444444455568899999999998665554
No 209
>KOG3877 consensus NADH:ubiquinone oxidoreductase, NDUFA10/42kDa subunit [Energy production and conversion]
Probab=29.03 E-value=52 Score=31.98 Aligned_cols=52 Identities=19% Similarity=0.468 Sum_probs=36.6
Q ss_pred chhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccch
Q 012362 103 TWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 171 (465)
Q Consensus 103 sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~Y 171 (465)
-.++.+-||-||-|+|+|-|- .|+++.+-|. |..||+++--.+|+ .|||+-.
T Consensus 66 rf~enSkvI~VeGnI~sGK~k-------------lAKelAe~Lg--f~hfP~~~~d~iyv--dsyg~D~ 117 (393)
T KOG3877|consen 66 RFHENSKVIVVEGNIGSGKTK-------------LAKELAEQLG--FVHFPEFRMDDIYV--DSYGNDL 117 (393)
T ss_pred hhcccceEEEEeCCcccCchh-------------HHHHHHHHhC--Ccccccccccceee--cccCccc
Confidence 456777899999999999772 2343333332 56899997666666 6898764
No 210
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=28.58 E-value=1.2e+02 Score=29.16 Aligned_cols=63 Identities=25% Similarity=0.354 Sum_probs=37.6
Q ss_pred ChHHHHHHHHHHHHHHHH-hC-----cccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCC
Q 012362 133 NDVEAANDLTTLLMELFN-KN-----EILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (465)
Q Consensus 133 s~~~~A~d~~~fL~~F~~-~f-----P~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~ 201 (465)
.+.+.+.++.++|.+=++ .. |++ ..+.|+|||=||+-+-.++... .+.....++++++.-+|.
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~--s~l~l~GHSrGGk~Af~~al~~----~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDF--SKLALAGHSRGGKVAFAMALGN----ASSSLDLRFSALILLDPV 130 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhccccccccc--cceEEeeeCCCCHHHHHHHhhh----cccccccceeEEEEeccc
Confidence 455566667776655222 22 232 3699999999999554444322 222335688999985543
No 211
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=28.54 E-value=93 Score=31.06 Aligned_cols=106 Identities=18% Similarity=0.196 Sum_probs=55.7
Q ss_pred CCEEEEECCCCCcccccc-----ccccccCCCcccCCCCCCchhccccceeecCCCccccccccCCCCcccChHHHHHHH
Q 012362 67 WPIILWLQGGPGASGVGI-----GNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDL 141 (465)
Q Consensus 67 ~pl~lwl~GGPG~sS~~~-----g~f~E~GP~~~~l~~~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~ 141 (465)
.|++|-++|=-|.|..-+ ..+.+-| ..++-++-- |-|.+-.....-+..... +|+
T Consensus 75 ~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg----------------~~~Vv~~~R-gcs~~~n~~p~~yh~G~t---~D~ 134 (345)
T COG0429 75 KPLVVLFHGLEGSSNSPYARGLMRALSRRG----------------WLVVVFHFR-GCSGEANTSPRLYHSGET---EDI 134 (345)
T ss_pred CceEEEEeccCCCCcCHHHHHHHHHHHhcC----------------CeEEEEecc-cccCCcccCcceecccch---hHH
Confidence 499999999777665311 1122222 233444422 444443322221111121 556
Q ss_pred HHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCC
Q 012362 142 TTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (465)
Q Consensus 142 ~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~ 201 (465)
..||......+| .++||.+|-|.||.. +|..+.++ +.-.....++++-+|+
T Consensus 135 ~~~l~~l~~~~~---~r~~~avG~SLGgnm---La~ylgee---g~d~~~~aa~~vs~P~ 185 (345)
T COG0429 135 RFFLDWLKARFP---PRPLYAVGFSLGGNM---LANYLGEE---GDDLPLDAAVAVSAPF 185 (345)
T ss_pred HHHHHHHHHhCC---CCceEEEEecccHHH---HHHHHHhh---ccCcccceeeeeeCHH
Confidence 666665555677 599999999999953 34444432 2111235566665543
No 212
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=27.70 E-value=37 Score=22.08 Aligned_cols=11 Identities=45% Similarity=1.150 Sum_probs=6.1
Q ss_pred CEEEEECCCCC
Q 012362 68 PIILWLQGGPG 78 (465)
Q Consensus 68 pl~lwl~GGPG 78 (465)
--.||++|-||
T Consensus 25 gRTiWFqGdPG 35 (39)
T PF09292_consen 25 GRTIWFQGDPG 35 (39)
T ss_dssp S-EEEESS---
T ss_pred CCEEEeeCCCC
Confidence 45799999887
No 213
>PRK06762 hypothetical protein; Provisional
Probab=27.68 E-value=36 Score=29.84 Aligned_cols=14 Identities=14% Similarity=0.525 Sum_probs=11.8
Q ss_pred CEEEEECCCCCccc
Q 012362 68 PIILWLQGGPGASG 81 (465)
Q Consensus 68 pl~lwl~GGPG~sS 81 (465)
|.++|+.|.|||.=
T Consensus 2 ~~li~i~G~~GsGK 15 (166)
T PRK06762 2 TTLIIIRGNSGSGK 15 (166)
T ss_pred CeEEEEECCCCCCH
Confidence 78999999998753
No 214
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=27.58 E-value=33 Score=29.17 Aligned_cols=36 Identities=14% Similarity=0.123 Sum_probs=18.2
Q ss_pred hHHHHHHHHHHhhhcCCcccccccCCCCCCceeeeeE
Q 012362 6 GFVATLLFLVSLLFNGGAAARALNKNQDASEEWGYVE 42 (465)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGyv~ 42 (465)
.+|++++|++++++++..+++.|.+.. -...++++.
T Consensus 6 ~iii~~i~l~~~~~~~~~rRR~r~G~~-P~~gt~w~~ 41 (130)
T PF12273_consen 6 AIIIVAILLFLFLFYCHNRRRRRRGLQ-PIYGTRWMA 41 (130)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCC-CcCCceecC
Confidence 344444455555566656666555333 233455555
No 215
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=26.10 E-value=1e+02 Score=33.40 Aligned_cols=38 Identities=11% Similarity=-0.036 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhCcccC-CCCEEEEecccccchHHHHHHH
Q 012362 141 LTTLLMELFNKNEILQ-KSPLFIVAESYGGKFAATLGLA 178 (465)
Q Consensus 141 ~~~fL~~F~~~fP~~~-~~~~~I~GESYgG~YvP~ia~~ 178 (465)
.+.-|+...+..-+.. ++++.|.|||+||.++-.|-+.
T Consensus 195 YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 195 TLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHh
Confidence 3344444444322223 5799999999999998887654
No 216
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=25.43 E-value=34 Score=32.07 Aligned_cols=56 Identities=20% Similarity=0.144 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCcc
Q 012362 137 AANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (465)
Q Consensus 137 ~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~ 205 (465)
..+++..+++.- |+-...+ ..|+|.|+||.-+-.++.+-.+ -+.+++.-+|.+++.
T Consensus 98 l~~el~p~i~~~---~~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd---------~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 98 LTEELIPYIEAN---YRTDPDR-RAIAGHSMGGYGALYLALRHPD---------LFGAVIAFSGALDPS 153 (251)
T ss_dssp HHTHHHHHHHHH---SSEEECC-EEEEEETHHHHHHHHHHHHSTT---------TESEEEEESEESETT
T ss_pred hhccchhHHHHh---cccccce-eEEeccCCCcHHHHHHHHhCcc---------ccccccccCcccccc
Confidence 344444444433 4333233 9999999999988888755332 477788777766653
No 217
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=24.57 E-value=1.3e+02 Score=32.45 Aligned_cols=34 Identities=29% Similarity=0.363 Sum_probs=30.4
Q ss_pred HHHHhcCCeEEEEecCCcccCCchhHHHHHHHcC
Q 012362 358 DELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLK 391 (465)
Q Consensus 358 ~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~ 391 (465)
+.||+-+.+||++.|..|..|.-.--|..-++|.
T Consensus 298 E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMq 331 (784)
T KOG3253|consen 298 EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQ 331 (784)
T ss_pred hhhHhcCCceEEEecCCcccCCHHHHHHHHHHhh
Confidence 4788889999999999999999988888888875
No 218
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=24.56 E-value=5e+02 Score=25.66 Aligned_cols=71 Identities=10% Similarity=0.061 Sum_probs=37.5
Q ss_pred ccChHHHHHHHHHHHHHHHHhCcc-cCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCcc
Q 012362 131 VKNDVEAANDLTTLLMELFNKNEI-LQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (465)
Q Consensus 131 ~~s~~~~A~d~~~fL~~F~~~fP~-~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~ 205 (465)
..+.++-++|+-..++-+-..... +...++.|+|||=|-.=+-.+. ...+.. ...-.++|+|+-.|.-|..
T Consensus 80 ~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl---~~~~~~-~~~~~VdG~ILQApVSDRE 151 (303)
T PF08538_consen 80 TSSLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYL---SSPNPS-PSRPPVDGAILQAPVSDRE 151 (303)
T ss_dssp S--HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHH---HH-TT----CCCEEEEEEEEE---TT
T ss_pred cchhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHH---hccCcc-ccccceEEEEEeCCCCChh
Confidence 346677788887766655444322 3467899999999965444333 222210 1134799999987766653
No 219
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=23.73 E-value=46 Score=29.38 Aligned_cols=14 Identities=29% Similarity=0.731 Sum_probs=9.6
Q ss_pred CCEEEEECCCCCcc
Q 012362 67 WPIILWLQGGPGAS 80 (465)
Q Consensus 67 ~pl~lwl~GGPG~s 80 (465)
+|.+|||.|=||+.
T Consensus 1 ~g~vIwltGlsGsG 14 (156)
T PF01583_consen 1 KGFVIWLTGLSGSG 14 (156)
T ss_dssp S-EEEEEESSTTSS
T ss_pred CCEEEEEECCCCCC
Confidence 37889999877653
No 220
>PF00121 TIM: Triosephosphate isomerase; InterPro: IPR000652 Triosephosphate isomerase (5.3.1.1 from EC) (TIM) [] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production. It is present in eukaryotes as well as in prokaryotes. TIM is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism [, ]. The tertiary structure of TIM has eight beta/alpha motifs folded into a barrel structure. The TIM barrel fold occurs ubiquitously and is found in numerous other enzymes that can be involved in energy metabolism, macromolecule metabolism, or small molecule metabolism []. The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder [].; GO: 0004807 triose-phosphate isomerase activity, 0008152 metabolic process; PDB: 2YPI_A 1YPI_A 1NEY_B 1NF0_B 1I45_A 7TIM_A 3YPI_B 2H6R_H 2Y63_A 1N55_A ....
Probab=23.73 E-value=31 Score=32.90 Aligned_cols=63 Identities=16% Similarity=0.300 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHHHHHHHh-CcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCccc
Q 012362 134 DVEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (465)
Q Consensus 134 ~~~~A~d~~~fL~~F~~~-fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~~ 206 (465)
+.+-++++..++++++.. |.+-..+.+-|. |||.--|.=+..+... -++.|+.||.+.+++..
T Consensus 176 s~~~~~~~~~~Ir~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~-------~~iDG~LVG~asl~~~~ 239 (244)
T PF00121_consen 176 SPEQIQEVHAFIREILAELYGEEVANNIRIL---YGGSVNPENAAELLSQ-------PDIDGVLVGGASLKAES 239 (244)
T ss_dssp CHHHHHHHHHHHHHHHHHHTHHHHHHHSEEE---EESSESTTTHHHHHTS-------TT-SEEEESGGGGSTHH
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCceeEE---ECCcCCcccHHHHhcC-------CCCCEEEEchhhhcccc
Confidence 346677799999998753 322223344444 8888888877776642 38999999999888753
No 221
>COG4425 Predicted membrane protein [Function unknown]
Probab=23.63 E-value=1e+02 Score=32.03 Aligned_cols=38 Identities=18% Similarity=0.266 Sum_probs=32.0
Q ss_pred ChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccc
Q 012362 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGK 170 (465)
Q Consensus 133 s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~ 170 (465)
.-.++|+-+.+++-......|+=..-++|+.|||-|..
T Consensus 372 yg~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 372 YGADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred cchhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 34578999999999999999987666799999999844
No 222
>PF11777 DUF3316: Protein of unknown function (DUF3316); InterPro: IPR016879 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=23.24 E-value=88 Score=25.92 Aligned_cols=19 Identities=26% Similarity=0.273 Sum_probs=12.7
Q ss_pred CcchhhHHHHHHHHHHhhh
Q 012362 1 MEKLCGFVATLLFLVSLLF 19 (465)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~ 19 (465)
||+++.++++|++.+.+.+
T Consensus 1 MKk~~ll~~~ll~s~~a~A 19 (114)
T PF11777_consen 1 MKKIILLASLLLLSSSAFA 19 (114)
T ss_pred CchHHHHHHHHHHHHHHhh
Confidence 8888777766666555444
No 223
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=22.83 E-value=2.1e+02 Score=26.73 Aligned_cols=114 Identities=21% Similarity=0.263 Sum_probs=59.8
Q ss_pred eEEEEEEEcCCCCCCCCCCCCEEEEECCCCCccccccccccccCCCccc--------CC---CCCC---------chh-c
Q 012362 48 HMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY--------LK---PRNS---------TWL-K 106 (465)
Q Consensus 48 ~lf~w~~es~~~~~~~~~~~pl~lwl~GGPG~sS~~~g~f~E~GP~~~~--------l~---~~~~---------sw~-~ 106 (465)
-+|.--.+|+ ++. .=|++=..|-||-..+| |--.|++|..-. +. +..| .=+ -
T Consensus 16 iIf~SrH~s~----~~~--p~LTvH~tGN~~~a~~G-G~p~~la~a~P~~~~~~l~~l~~~~~e~y~v~~EaTHHGPt~~ 88 (213)
T PF04414_consen 16 IIFLSRHSSE----SGR--PSLTVHTTGNFGEAEYG-GKPGELAPANPRLMKALLRALKKHAPEGYEVSYEATHHGPTDL 88 (213)
T ss_dssp EEEEEEEE-T----T-----EEEEE--EESS--TTS-S-TTEE-BB-HHHHHHHHHHHHHHGGCT-EEEE--S-SS----
T ss_pred EEEEeeccCC----CCC--ceEEEeCCCCCCccccC-CCCCccccCCHHHHHHHHHHHHHhccCCCEEEEEeeccCCCCC
Confidence 3455555552 332 15889999999998886 888999987521 10 0011 111 2
Q ss_pred cccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccC-CCCEEEEecccccchHHHHHHHHHH
Q 012362 107 KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQ-KSPLFIVAESYGGKFAATLGLAAVK 181 (465)
Q Consensus 107 ~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~-~~~~~I~GESYgG~YvP~ia~~i~~ 181 (465)
..=.+||+ .|= +....++..+++-+.+.+...+..-++-. ..++.-+| ||||+|.+...+++
T Consensus 89 ~~Ps~FvE----IGS------te~eW~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~ 151 (213)
T PF04414_consen 89 SVPSVFVE----IGS------TEEEWNDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALE 151 (213)
T ss_dssp -SBEEEEE----EEE------SHHHHT-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHH
T ss_pred CCCcEEEE----eCC------CHHHhCChHHHHHHHHHHHHHhcccccccccceeEEec---Ccccchhhhhhhhc
Confidence 22344544 121 12356788899999999999888765432 15566667 89999999888775
No 224
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=22.79 E-value=63 Score=29.58 Aligned_cols=29 Identities=10% Similarity=0.052 Sum_probs=25.2
Q ss_pred CeEEEEecCCcccCCchhHHHHHHHcCcc
Q 012362 365 VNVTVYNGQLDVICSTKGTEAWIEKLKWD 393 (465)
Q Consensus 365 irVLiy~Gd~D~i~n~~G~~~~i~~L~W~ 393 (465)
-+++|.+|..|.+||....+...+.|+.-
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 35789999999999999999999988744
No 225
>TIGR02052 MerP mercuric transport protein periplasmic component. This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).
Probab=22.70 E-value=50 Score=24.84 Aligned_cols=16 Identities=25% Similarity=0.384 Sum_probs=11.4
Q ss_pred CcchhhHHHHHHHHHH
Q 012362 1 MEKLCGFVATLLFLVS 16 (465)
Q Consensus 1 ~~~~~~~~~~~~~~~~ 16 (465)
||+|+++++++.++.+
T Consensus 1 ~~~~~~~~~~~~~~~~ 16 (92)
T TIGR02052 1 MKKLATLLALFVLTSL 16 (92)
T ss_pred ChhHHHHHHHHHHhcc
Confidence 8999888766655544
No 226
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=22.68 E-value=1.4e+02 Score=28.22 Aligned_cols=44 Identities=16% Similarity=0.195 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccchHHHHHHH
Q 012362 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (465)
Q Consensus 134 ~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~YvP~ia~~ 178 (465)
..+...|+..++. |+...|+-....+.++|-|+||+.+-.++.+
T Consensus 89 ~~~~~~d~~a~~~-~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~ 132 (236)
T COG0412 89 PAEVLADIDAALD-YLARQPQVDPKRIGVVGFCMGGGLALLAATR 132 (236)
T ss_pred HHHHHHHHHHHHH-HHHhCCCCCCceEEEEEEcccHHHHHHhhcc
Confidence 3566677665554 7777886666789999999999988887754
No 227
>PF04202 Mfp-3: Foot protein 3; InterPro: IPR007328 Mytilus foot protein-3 (Mfp-3) is a highly polymorphic protein family located in the byssal adhesive plaques of blue mussels.
Probab=22.22 E-value=74 Score=23.51 Aligned_cols=22 Identities=23% Similarity=0.138 Sum_probs=12.8
Q ss_pred CcchhhHHHHHHHHHHhhhcCCc
Q 012362 1 MEKLCGFVATLLFLVSLLFNGGA 23 (465)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~ 23 (465)
|+.|.+.| +|+|++|.+|+-++
T Consensus 1 mnn~Si~V-LlaLvLIg~fAVqS 22 (71)
T PF04202_consen 1 MNNLSIAV-LLALVLIGSFAVQS 22 (71)
T ss_pred CCchhHHH-HHHHHHHhhheeee
Confidence 66665544 45566666766543
No 228
>PF08060 NOSIC: NOSIC (NUC001) domain; InterPro: IPR012976 This is the central domain in Nop56/SIK1-like proteins [].; PDB: 3PLA_K 3ICX_B 3ID6_A 3ID5_E 3NVM_A 3NMU_B 2NNW_C 3NVI_A 3NVK_A 2OZB_E ....
Probab=21.73 E-value=92 Score=21.95 Aligned_cols=22 Identities=23% Similarity=0.144 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHH-hCcccC
Q 012362 135 VEAANDLTTLLMELFN-KNEILQ 156 (465)
Q Consensus 135 ~~~A~d~~~fL~~F~~-~fP~~~ 156 (465)
+.....++.+++.||. +|||+.
T Consensus 13 d~ei~~~~~~lre~Y~~~FPEL~ 35 (53)
T PF08060_consen 13 DKEINLLHMRLREWYSWHFPELE 35 (53)
T ss_dssp HHHHHHHHHHHHHHHTTTSTTHH
T ss_pred HHHHHHHHHHHHHHHHccchhHH
Confidence 3445568899999997 699974
No 229
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=20.99 E-value=1.2e+02 Score=31.18 Aligned_cols=39 Identities=21% Similarity=0.636 Sum_probs=27.6
Q ss_pred CCCCCceeeeeEeCCCceEEEEEEEcCCCCCCCC-CCCCEE-EEECC
Q 012362 31 NQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPS-KPWPII-LWLQG 75 (465)
Q Consensus 31 ~~~~~~~sGyv~v~~~~~lf~w~~es~~~~~~~~-~~~pl~-lwl~G 75 (465)
...+...+||++.+..+++.+ .-|+ +|. ...||| +||.|
T Consensus 195 ~~~~~~k~GfLTmDqtRkl~l-Lles-----Dpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 195 QVQGTYKSGFLTMDQTRKLLL-LLES-----DPKASSLPLVGIWLSG 235 (410)
T ss_pred ccccccccceeeEccccceEE-Eecc-----CCCccCCCceeeEecC
Confidence 344566789999999888888 6665 332 223766 89996
No 230
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=20.57 E-value=1.4e+02 Score=32.90 Aligned_cols=62 Identities=15% Similarity=0.267 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHHh-CcccCCCCEEEEecccccchHHHHHHHHHHHHHcCcceeeeeeEEccCCCCCccc
Q 012362 135 VEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (465)
Q Consensus 135 ~~~A~d~~~fL~~F~~~-fP~~~~~~~~I~GESYgG~YvP~ia~~i~~~~~~~~~~inLkGi~IGNg~~~p~~ 206 (465)
.+.|++++.++++++.. +-+-....+-|. |||.--|.-+..|... -++.|+.||..-+++..
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~-------~diDG~LVGgASL~~~~ 636 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQ-------PDIDGGLVGGASLKAQE 636 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcC-------CCCCeEEeehHhcCHHH
Confidence 46677899999999863 322212233333 9999999999988753 37999999999888743
No 231
>COG4569 MhpF Acetaldehyde dehydrogenase (acetylating) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=20.34 E-value=83 Score=29.00 Aligned_cols=82 Identities=23% Similarity=0.229 Sum_probs=44.9
Q ss_pred CCCchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccccch--HHHHHH
Q 012362 100 RNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF--AATLGL 177 (465)
Q Consensus 100 ~~~sw~~~~n~lyiDqPvGvGfSy~~~~~~~~~s~~~~A~d~~~fL~~F~~~fP~~~~~~~~I~GESYgG~Y--vP~ia~ 177 (465)
+.-.|.+-.-|+=|| |---|......- . +.+. ++-+ .|+-..|+|+.-++..-..|-|-|- +|.+|.
T Consensus 25 r~g~~le~~~mvgid-p~sdglaraarl-g-v~tt---~egv-----~~ll~~p~~~di~lvfdatsa~~h~~~a~~~ae 93 (310)
T COG4569 25 RHGQHLEMAVMVGID-PQSDGLARAARL-G-VATT---HEGV-----IGLLNMPEFADIDLVFDATSAGAHVKNAAALAE 93 (310)
T ss_pred hcCCcccceeEEccC-CCccHHHHHHhc-C-Ccch---hhHH-----HHHHhCCCCCCcceEEeccccchhhcchHhHHh
Confidence 344677888888888 645555443211 1 1122 2222 2455689988777777777766653 233322
Q ss_pred HHHHHHHcCcceeeeeeEEccC
Q 012362 178 AAVKAIEAGKLKLKLGGVALGD 199 (465)
Q Consensus 178 ~i~~~~~~~~~~inLkGi~IGN 199 (465)
.|-.-|.|.-.+||-
T Consensus 94 -------~gi~~idltpaaigp 108 (310)
T COG4569 94 -------AGIRLIDLTPAAIGP 108 (310)
T ss_pred -------cCCceeecchhccCC
Confidence 233345666666653
Done!