BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012365
(465 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NQ81|PP304_ARATH Pentatricopeptide repeat-containing protein At4g04790,
mitochondrial OS=Arabidopsis thaliana GN=At4g04790 PE=2
SV=2
Length = 821
Score = 482 bits (1240), Expect = e-135, Method: Compositional matrix adjust.
Identities = 223/441 (50%), Positives = 332/441 (75%)
Query: 1 MHAKLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESY 60
MH +L++ PSS SY+KL+ YSCD +V ALDVVE+M + L+ S + ++S+LHA +E
Sbjct: 363 MHEELDVMPSSTSYEKLVKYSCDSNEVVTALDVVEKMGEAGLMISADILHSLLHAIDEVL 422
Query: 61 EFNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYN 120
EF+LVRRI+ ++C ++KPN+E FRS+I L +IKDF+ AY++L +LK NL P +SM+N
Sbjct: 423 EFDLVRRIHSIMCTKSVKPNTENFRSIIRLCTRIKDFEGAYNMLGNLKNFNLEPNSSMFN 482
Query: 121 AIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKYYEQLKSAGGQ 180
I+AGYFR+K+V ALMV+K+M++A VKPDS TF YLI+NC+ E+ I KYYE++K AG Q
Sbjct: 483 CILAGYFREKNVSSALMVVKQMKEAGVKPDSITFGYLINNCTQEDAITKYYEEMKQAGVQ 542
Query: 181 ITKYVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVKSALVSALASHGRTSDAIIVY 240
TK ++M+LI+AY G+FEKA+QV++D ++P +++E+KS L+SALAS G+ +DA+ +Y
Sbjct: 543 ATKRIYMSLIDAYAASGKFEKAKQVLVDPDVPAINQNELKSVLISALASRGKWADALHIY 602
Query: 241 EEIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVHDPDYWMDGCCRLILHCVRFKQ 300
EE+++A C+++P+++I+LIE+ +S+GEL+ L+QL +++ D W+DG R+IL VR K+
Sbjct: 603 EEMRKAECHVDPKSIISLIEYSDSKGELSTLVQLADDLQDDTSWIDGFFRMILFAVRNKK 662
Query: 301 LSSATDLLKQLKDKFKDDEMAMEYHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGLPPS 360
S DLLK+ K + + +E HF E+F IA T+P V +G+DLL+F+KDELG PS
Sbjct: 663 SSDIVDLLKRNKVRLLKKGIPVEAHFDEVFWAIAETEPSKVHLGMDLLRFMKDELGFVPS 722
Query: 361 RKCLDFLLGACVNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLLS 420
RKCLDFLL ACVNA+DL+ L+WKEY++A P NVLS+L MY+ LA+G+ + A L+S
Sbjct: 723 RKCLDFLLHACVNAKDLEHGLLVWKEYQSAAFPCNVLSFLRMYQVLLAAGDSEGAKALVS 782
Query: 421 KMPKDDPHVRFVIQACKQTYT 441
K+PKDD V+ +I+ + ++
Sbjct: 783 KIPKDDKDVQHIIEESQSAFS 803
>sp|O49711|PP335_ARATH Pentatricopeptide repeat-containing protein At4g21880,
mitochondrial OS=Arabidopsis thaliana GN=At4g21880 PE=3
SV=2
Length = 843
Score = 471 bits (1211), Expect = e-132, Method: Compositional matrix adjust.
Identities = 220/441 (49%), Positives = 325/441 (73%)
Query: 1 MHAKLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESY 60
+H +L+I PSS SY+ L++Y C +V ALD+VE M + LV S ++S+L A E+
Sbjct: 383 LHEELDIVPSSTSYENLVSYLCGSNEVVTALDIVENMCEAGLVISANILHSLLQAIEQIL 442
Query: 61 EFNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYN 120
EFNLV+RIY ++ + ++KPNSETFR I+L ++IKDF+ AY++L +LK NL P +SMYN
Sbjct: 443 EFNLVQRIYSIMSNKSVKPNSETFRKSINLCIRIKDFEGAYNMLGNLKNFNLAPNSSMYN 502
Query: 121 AIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKYYEQLKSAGGQ 180
+IMAGYFR+K V AL VLKEM++A+VKPDS TFSYLI+ C E I KYY+++K AG +
Sbjct: 503 SIMAGYFREKKVNSALKVLKEMKEADVKPDSVTFSYLINYCGEEATIAKYYKEMKQAGVE 562
Query: 181 ITKYVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVKSALVSALASHGRTSDAIIVY 240
+ K+V+M+L+ AY +CG+FEKA+QV++D E+P K +E+KS L+SALAS+G ++A+ +Y
Sbjct: 563 VNKHVYMSLVKAYASCGQFEKAKQVLMDLEVPAKDHNELKSVLISALASNGNITEALSIY 622
Query: 241 EEIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVHDPDYWMDGCCRLILHCVRFKQ 300
EE+K+ C +EP+A+++LIE+ +S EL L++L E+ D +W+DG ++I+ VR +
Sbjct: 623 EEMKKLRCPVEPKAILSLIENSDSNAELGTLVELTHELRDSKFWIDGFFKIIVFAVRNNR 682
Query: 301 LSSATDLLKQLKDKFKDDEMAMEYHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGLPPS 360
SS DLL+Q K+ D++ +EY F E+F IA T+ DV++GLDL+ F+K+EL L PS
Sbjct: 683 SSSILDLLEQTKNHLSKDDVGVEYWFEEVFKSIAETESSDVKVGLDLVSFMKEELELCPS 742
Query: 361 RKCLDFLLGACVNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLLS 420
RKCLDFLL ACVNA+D + A L+W+EY+ A LPYNV++YL MY+ +A+G+ KSA ++S
Sbjct: 743 RKCLDFLLHACVNAKDKQSALLVWEEYQCAELPYNVINYLRMYQVLVAAGDSKSAEAIVS 802
Query: 421 KMPKDDPHVRFVIQACKQTYT 441
K+P DD V+ +I+ + +T
Sbjct: 803 KIPNDDKDVKCIIKESRIVFT 823
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 157/336 (46%), Gaps = 26/336 (7%)
Query: 1 MHAKL---EITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACE 57
MHA++ +TPS +Y LI C ++ A++ ++QM L P+ T +++
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 58 ESYEFNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTAS 117
+ N R+ + + P+ T+ ++I+ + + A ++L+D+KE L P
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 118 MYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNE---EDIIKYYEQL 174
Y+ +++G+ R DV AL V +EM + +KPD+ T+S LI + ++ YE++
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 175 KSAGGQITKYVFMALINAYTTCGEFEKARQVVLD-AEIPVKSRSEVKSALVSALASHGRT 233
G ++ + ALINAY G+ EKA Q+ + E V S L++ L RT
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Query: 234 SDAI---------------IVYEEIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEV 278
+A + Y + E N+E ++V++LI+ +G + Q+ E +
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631
Query: 279 HDPDYWMDGCCRLIL---HCVRFKQLSSATDLLKQL 311
++ DG I+ HC R + A L K++
Sbjct: 632 LGKNHKPDGTAYNIMIHGHC-RAGDIRKAYTLYKEM 666
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 134/295 (45%), Gaps = 27/295 (9%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
+PS +Y LI C K+ A+ V+E M + L P + +++L SY+ +
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 67 RIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGY 126
R+ + +KP++ T+ S+I + + A L +++ + L P Y A++ Y
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Query: 127 FRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEED-------IIK-YYEQLKSAG 178
+ D++ AL + EM + V PD T+S LI+ + + ++K +YE+ S
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE--SVP 588
Query: 179 GQITKYVFM------------ALINAYTTCGEFEKARQVVLDAEIPVKSRSEVKSALVSA 226
+T + + +LI + G +A QV + K+ +A
Sbjct: 589 SDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVF--ESMLGKNHKPDGTAYNIM 646
Query: 227 LASHGRTSD---AIIVYEEIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEV 278
+ H R D A +Y+E+ ++G L VIAL++ L+ EG++N L ++ V
Sbjct: 647 IHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHV 701
Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/403 (18%), Positives = 170/403 (42%), Gaps = 19/403 (4%)
Query: 30 ALDVVEQMVQGELVPSTETINSILHACEES-YEFNLVRRIYPMICHHNLKPNSETFRSMI 88
AL +V +P + N++L A S + ++ + + PN T+ +I
Sbjct: 153 ALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILI 212
Query: 89 SLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVK 148
+ D A +L D ++ +P YN ++ GY + + + +L+ M ++
Sbjct: 213 RGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLE 272
Query: 149 PDSQTFSYLIHNCSNE---EDIIKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQV 205
P+ +++ +I+ E +++ ++ G + + + LI Y G F +A +
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA--L 330
Query: 206 VLDAEI---PVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHL 262
V+ AE+ + ++L+ ++ G + A+ ++++ G R L++
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 263 NSEGELNRLIQLLEEVHDPDYWMDGCCRLIL---HCVRFKQLSSATDLLKQLKDKFKDDE 319
+ +G +N ++L E++D + L HCV K + A +L+ +K+K +
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK-MEDAIAVLEDMKEKGLSPD 449
Query: 320 MAMEYHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGLPPSRKCLDFLLGACVNARDLKR 379
+ FC+ D +++ +++ E G+ P L+ R K
Sbjct: 450 VVSYSTVLSGFCRSYDVDEA-LRVKREMV-----EKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 380 AHLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLLSKM 422
A +++E GLP + +Y + A+ G+ + A +L ++M
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 117/254 (46%), Gaps = 6/254 (2%)
Query: 6 EITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLV 65
+++P+ +Y LI C + VAL + ++M +P+ T N+++ + + +
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 66 RRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAG 125
++ + L+PN ++ +I+ + +L ++ YN ++ G
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 126 YFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN---CSNEEDIIKYYEQLKSAGGQIT 182
Y ++ + AL++ EM + + P T++ LIH+ N +++ +Q++ G
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379
Query: 183 KYVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVK-SALVSALASHGRTSDAIIVYE 241
+ + L++ ++ G +A +V+ + S S V +AL++ G+ DAI V E
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 242 EIKEAGCNLEPRAV 255
++KE G L P V
Sbjct: 440 DMKEKG--LSPDVV 451
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 132/296 (44%), Gaps = 40/296 (13%)
Query: 6 EITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLV 65
+++P++ +Y +LI C VH A+ V+ +M++ +++P T NS++ S F+
Sbjct: 423 KLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 66 RRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAG 125
R+ ++ L P+ T+ SMI K K + A L D L++ + P MY A++ G
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 126 YFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN-CSN---------EEDIIKY----- 170
Y + V A ++L++M N P+S TF+ LIH C++ EE ++K
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 171 -----------------------YEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVVL 207
++Q+ S+G + + + I Y G A ++
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 208 DA-EIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHL 262
E V S+L+ G+T+ A V + +++ GC ++LI+HL
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 94/447 (21%), Positives = 176/447 (39%), Gaps = 23/447 (5%)
Query: 6 EITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLV 65
++ P+ +Y K++ C L V A V ++V+ L P T S++ + + +
Sbjct: 213 KVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSA 272
Query: 66 RRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAG 125
+++ + + N + +I + D A L +K+ PT Y ++
Sbjct: 273 FKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKS 332
Query: 126 YFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKYYE---QLKSAGGQIT 182
+ AL ++KEME+ +KP+ T++ LI + ++ K E Q+ G
Sbjct: 333 LCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPN 392
Query: 183 KYVFMALINAYTTCGEFEKARQVV-LDAEIPVKSRSEVKSALVSALASHGRTSDAIIVYE 241
+ ALIN Y G E A VV L + + + L+ A+ V
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLN 451
Query: 242 EIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVHD----PDYWMDGCCRLILHCVR 297
++ E + +LI+ G + +LL ++D PD W +I +
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT--YTSMIDSLCK 509
Query: 298 FKQLSSATDLLKQLKDKFKDDEMAMEYHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGL 357
K++ A DL L+ K + + M + +C+ D + +L+ + + L
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHL-----MLEKMLSKNCL 564
Query: 358 PPSRKCLDFLLGACVNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSA-- 415
P S + G C + + LK A L+ ++ GL V + + L G+ A
Sbjct: 565 PNSLTFNALIHGLCADGK-LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 416 --SKLLSKMPKDDPH--VRFVIQACKQ 438
++LS K D H F+ C++
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCRE 650
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 3/156 (1%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGE-LVPSTETINSILHACEESYEFNLV 65
+TP++ SY+KLI C++ + VA V + M + E + PS N++L C + + N
Sbjct: 756 VTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEA 815
Query: 66 RRIY-PMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMA 124
++ MIC +L P E+ + +I K + + S+ +L + + I+
Sbjct: 816 AKVVDDMICVGHL-PQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIID 874
Query: 125 GYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN 160
G ++ V+ + ME+ K SQT+S LI
Sbjct: 875 GVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/151 (15%), Positives = 69/151 (45%), Gaps = 1/151 (0%)
Query: 23 DLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYP-MICHHNLKPNS 81
++++ ++++E+MV+ + P+ ++ ++ E + +++ M + + P+
Sbjct: 737 NMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSE 796
Query: 82 ETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKE 141
F +++S K+K + A ++DD+ + +P ++ G ++K + + V +
Sbjct: 797 LVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQN 856
Query: 142 MEQANVKPDSQTFSYLIHNCSNEEDIIKYYE 172
+ Q D + +I + + +YE
Sbjct: 857 LLQCGYYEDELAWKIIIDGVGKQGLVEAFYE 887
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 78/180 (43%), Gaps = 22/180 (12%)
Query: 1 MHAKLE---ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSIL-HAC 56
M AK+ ++P +Y LI DL + + A DV+++M PS T S++ H
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718
Query: 57 EESY-----------------EFNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDS 99
E Y EF+ V + + H++ PN++++ +I ++ +
Sbjct: 719 EMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRV 778
Query: 100 AYSLLDDL-KEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLI 158
A + D + + + P+ ++NA+++ + K A V+ +M P ++ LI
Sbjct: 779 AEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLI 838
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 186/462 (40%), Gaps = 57/462 (12%)
Query: 7 ITPSSASYKKLITYSCDLLKVHV-ALDVVEQMVQGELVPSTETINSILHACEESYEFNLV 65
I P + +Y LIT C +H A V E+M T N++L +S+
Sbjct: 275 IAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 66 RRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAG 125
++ + + P+ T+ S+IS + D A L + + E P Y +++G
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 126 YFRKKDVQGALMVLKEMEQANVKPDSQTFSYL-------------------IHNCSNEED 166
+ R V+ A+ + +EM A KP+ TF+ I+ C D
Sbjct: 394 FERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453
Query: 167 IIKY-------------------YEQLKSAGGQITKYVFMALINAYTTCGEFEKARQV-- 205
I+ + ++++K AG + F LI+AY+ CG FE+A V
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Query: 206 -VLDAEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHLNS 264
+LDA V + +++ALA G + V E+++ C +L+ +
Sbjct: 514 RMLDAG--VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN 571
Query: 265 EGELNRLIQLLEEVH----DPDYWMDGCCRLILHCVRFKQLSSATDLLKQLKDKFKDDEM 320
E+ + L EEV+ +P + L+L C + L A +LK++ ++
Sbjct: 572 GKEIGLMHSLAEEVYSGVIEPRAVL--LKTLVLVCSKCDLLPEAERAFSELKERGFSPDI 629
Query: 321 AMEYHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGLPPSRKCLDFLLGACVNARDLKRA 380
I+ + V +L ++K E G PS + L+ + D ++
Sbjct: 630 TTLNSMVSIYGRRQM-----VAKANGVLDYMK-ERGFTPSMATYNSLMYMHSRSADFGKS 683
Query: 381 HLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLLSKM 422
I +E G+ +++SY + A+ + + AS++ S+M
Sbjct: 684 EEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 110/250 (44%), Gaps = 8/250 (3%)
Query: 9 PSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRI 68
P+ +Y L+ + ++ + + E++ G + P + +++ C + R
Sbjct: 557 PNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERA 616
Query: 69 YPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFR 128
+ + P+ T SM+S+ + + A +LD +KE P+ + YN++M + R
Sbjct: 617 FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSR 676
Query: 129 KKDVQGALMVLKEMEQANVKPDSQTFSYLIHN-CSNE--EDIIKYYEQLKSAGGQITKYV 185
D + +L+E+ +KPD +++ +I+ C N D + + +++++G
Sbjct: 677 SADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVIT 736
Query: 186 FMALINAYTTCGEFEKARQVV-LDAEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIK 244
+ I +Y FE+A VV + + +++V R +A + E+++
Sbjct: 737 YNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
Query: 245 EAGCNLEPRA 254
NL+P A
Sbjct: 797 ----NLDPHA 802
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 154/361 (42%), Gaps = 41/361 (11%)
Query: 83 TFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKE- 141
++ S+IS + A ++ ++E PT YN I+ + + + L E
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 142 MEQANVKPDSQTFSYLIHNC---SNEEDIIKYYEQLKSAGGQITKYVFMALINAYTTCGE 198
M+ + PD+ T++ LI C S ++ + +E++K+AG K + AL++ Y
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 199 FEKARQVVLDAEIPVKSRSEVK-SALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIA 257
++A +V+ + + S S V ++L+SA A G +A+ + ++ E G +
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 258 LIEHLNSEGELNRLIQLLEEVHDPDYWMDGCCRLILHCVRFKQLSSATDLLKQLKDKFKD 317
L+ G++ + + EE+ + GC + + +K ++ K
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNA-----GCK---------PNICTFNAFIKMYGNRGKF 435
Query: 318 DEMAMEYHFSEIFCQIATTD-PPDV-----------QIGLDL-LQFIKDEL---GLPPSR 361
EM +IF +I PD+ Q G+D + + E+ G P R
Sbjct: 436 TEMM------KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPER 489
Query: 362 KCLDFLLGACVNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLLSK 421
+ + L+ A ++A +++ +AG+ ++ +Y + A G + + K+L++
Sbjct: 490 ETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAE 549
Query: 422 M 422
M
Sbjct: 550 M 550
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
I P SY +I C ++ A + +M +VP T N+ + + F
Sbjct: 695 IKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAI 754
Query: 67 RIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTA 116
+ + H +PN T+ S++ K+ D A ++DL+ NL P A
Sbjct: 755 GVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR--NLDPHA 802
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 143/316 (45%), Gaps = 10/316 (3%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
++P LI+ C K AL++ Q + V T T N++LH E+ + +
Sbjct: 479 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 538
Query: 67 RIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGY 126
RI I + ++ ++IS K D A+ LD++ + L P Y+ ++ G
Sbjct: 539 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 598
Query: 127 FRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNC---SNEEDIIKYYEQLKSAGGQITK 183
F V+ A+ + ++ + PD T+S +I C E+ ++++++ S Q
Sbjct: 599 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 658
Query: 184 YVFMALINAYTTCGEFEKARQVVLDAE-IPVKSRSEVKSALVSALASHGRTSDAIIVYEE 242
V+ LI AY G A ++ D + + S ++L+ ++ R +A +++EE
Sbjct: 659 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 718
Query: 243 IKEAGCNLEPRAV--IALIEHLNSEGELNRLIQLLEEVHDPDYWMDGCCRLIL--HCVRF 298
++ G LEP ALI+ G++ ++ LL E+H + + ++ R
Sbjct: 719 MRMEG--LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 776
Query: 299 KQLSSATDLLKQLKDK 314
++ A+ LL ++++K
Sbjct: 777 GNVTEASRLLNEMREK 792
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 92/473 (19%), Positives = 174/473 (36%), Gaps = 87/473 (18%)
Query: 28 HVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMIC-------------- 73
++ALDV + + PS T N +L + + EF + ++C
Sbjct: 221 YLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAI 280
Query: 74 --------------------HHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLM 113
+ PN TF ++I +D A+ + + E +
Sbjct: 281 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 340
Query: 114 PTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN---CSNEEDIIKY 170
PT Y+ ++ G R K + A VLKEM + P+ ++ LI + + I+
Sbjct: 341 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 400
Query: 171 YEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVVLD---------------------- 208
+ + S G +T + LI Y G+ + A +++ +
Sbjct: 401 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 460
Query: 209 -----------AEIPVKSRS---EVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRA 254
E+ +++ S + + L+S L HG+ S A+ ++ + G ++ R
Sbjct: 461 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 520
Query: 255 VIALIEHLNSEGELNRLIQLLEEVHDPDYWMDGCC--RLILHCVRFKQLSSATDLLKQL- 311
AL+ L G+L+ ++ +E+ MD LI C K+L A L ++
Sbjct: 521 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 580
Query: 312 KDKFKDDEMAMEYHFSEIFCQIATTDPPDVQIGLDLLQFIKD--ELGLPPSRKCLDFLLG 369
K K D Y +S + C + + + + +QF D G+ P ++
Sbjct: 581 KRGLKPD----NYTYSILICGLFNMNKVE-----EAIQFWDDCKRNGMLPDVYTYSVMID 631
Query: 370 ACVNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLLSKM 422
C A + + E + + N + Y + +A+ SG A +L M
Sbjct: 632 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 684
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 74/166 (44%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
+ P++ Y LI C ++ +AL++ E M + P++ T S++ +
Sbjct: 654 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 713
Query: 67 RIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGY 126
++ + L+PN + ++I K+ LL ++ N+ P Y ++ GY
Sbjct: 714 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 773
Query: 127 FRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKYYE 172
R +V A +L EM + + PDS T+ I+ + +++ ++
Sbjct: 774 ARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/207 (17%), Positives = 87/207 (42%), Gaps = 3/207 (1%)
Query: 3 AKLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEF 62
K + P + +Y LI ++ KV A+ + + ++P T + ++ C ++
Sbjct: 580 VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 639
Query: 63 NLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAI 122
+ + + N++PN+ + +I + A L +D+K + P ++ Y ++
Sbjct: 640 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 699
Query: 123 MAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKY---YEQLKSAGG 179
+ G V+ A ++ +EM ++P+ ++ LI ++K ++ S
Sbjct: 700 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 759
Query: 180 QITKYVFMALINAYTTCGEFEKARQVV 206
K + +I Y G +A +++
Sbjct: 760 HPNKITYTVMIGGYARDGNVTEASRLL 786
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 170/432 (39%), Gaps = 49/432 (11%)
Query: 8 TPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRR 67
P + L + DL + A+ +M + + P T + N +LH + + + V+R
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 68 IYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYF 127
+ + +P T+ MI K D ++A L +++K L+P YN+++ G+
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 128 RKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNC----SNEEDIIKYYEQLKSAGGQITK 183
+ + + +EM+ +PD T++ LI NC +++Y ++K G +
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALI-NCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 184 YVFMALINAYTTCGEFEKARQVVLDA-EIPVKSRSEVKSALVSALASHGRTSDAIIVYEE 242
+ L++A+ G ++A + +D + + ++L+ A G SDA + E
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 427
Query: 243 IKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVHDPDYW--MDGCCRLILHCVRFKQ 300
+ + G ALI+ L + +L ++ + LI V+ K
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 301 LSSATDLLKQLKDKFKDDEMAMEYHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGLPPS 360
+ A +LL +LK + I DLL +
Sbjct: 488 MDRALELLNELKGR---------------------------GIKPDLLLYGT-------- 512
Query: 361 RKCLDFLLGACVNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLLS 420
F+ G C + ++ A ++ E + G+ N L Y + A+ SGN LL
Sbjct: 513 -----FIWGLC-SLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLD 566
Query: 421 KMPKDDPHVRFV 432
+M + D V V
Sbjct: 567 EMKELDIEVTVV 578
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 134/318 (42%), Gaps = 10/318 (3%)
Query: 4 KLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFN 63
+ + P + S L+ L K + M+ P+ T N ++ + +
Sbjct: 220 RFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVE 279
Query: 64 LVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIM 123
R ++ + L P++ T+ SMI K+ D +++K+M P YNA++
Sbjct: 280 AARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALI 339
Query: 124 AGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNE---EDIIKYYEQLKSAGGQ 180
+ + + L +EM+ +KP+ ++S L+ E + IK+Y ++ G
Sbjct: 340 NCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV 399
Query: 181 ITKYVFMALINAYTTCGEFEKARQVVLDA-EIPVKSRSEVKSALVSALASHGRTSDAIIV 239
+Y + +LI+A G A ++ + ++ V+ +AL+ L R +A +
Sbjct: 400 PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEEL 459
Query: 240 YEEIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVHD----PDYWMDGCCRLILHC 295
+ ++ AG + ALI ++R ++LL E+ PD + G I
Sbjct: 460 FGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG--TFIWGL 517
Query: 296 VRFKQLSSATDLLKQLKD 313
+++ +A ++ ++K+
Sbjct: 518 CSLEKIEAAKVVMNEMKE 535
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 127/275 (46%), Gaps = 11/275 (4%)
Query: 12 ASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPM 71
+Y LI CD ++ A ++ +M ++P+ + N+++H ++ + +
Sbjct: 438 VTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 497
Query: 72 ICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKD 131
+ +KP+ + + I ++ ++A +++++KE + + +Y +M YF+ +
Sbjct: 498 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 557
Query: 132 VQGALMVLKEMEQANVKPDSQTFSYLIHN-CSNE--EDIIKYYEQLKSAGG-QITKYVFM 187
L +L EM++ +++ TF LI C N+ + Y+ ++ + G Q +F
Sbjct: 558 PTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFT 617
Query: 188 ALINAYTTCGEFEKA----RQVVLDAEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEI 243
A+I+ + E A Q+V +P ++ ++L+ G +A+ + +++
Sbjct: 618 AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRT---AYTSLMDGNFKQGNVLEALALRDKM 674
Query: 244 KEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEV 278
E G L+ A +L+ L+ +L + LEE+
Sbjct: 675 AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 126/315 (40%), Gaps = 50/315 (15%)
Query: 9 PSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHA-CEESYEFNLVRR 67
P +Y LI C K+ + L+ +M L P+ + ++++ A C+E ++
Sbjct: 330 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK- 388
Query: 68 IYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNL--------------- 112
Y + L PN T+ S+I N KI + A+ L +++ ++ +
Sbjct: 389 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448
Query: 113 --------------------MPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQ 152
+P + YNA++ G+ + K++ AL +L E++ +KPD
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 508
Query: 153 TFSYLIHN-CSNE--EDIIKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVV--- 206
+ I CS E E ++K G + ++ L++AY G + ++
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 207 --LDAEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEI-KEAGCNLEPRAVIALIEHLN 263
LD E+ V + L+ L + S A+ + I + G A+I+ L
Sbjct: 569 KELDIEVTVVTF----CVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLC 624
Query: 264 SEGELNRLIQLLEEV 278
+ ++ L E++
Sbjct: 625 KDNQVEAATTLFEQM 639
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/428 (20%), Positives = 177/428 (41%), Gaps = 20/428 (4%)
Query: 5 LEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNL 64
L +PS A+ L+ K+ AL++V+++V + P+ N+++ + + +F+
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHE 385
Query: 65 VRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMA 124
++ + L+PN T+ +I + + D+A S L ++ + L + YN+++
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLIN 445
Query: 125 GYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDI---IKYYEQLKSAGGQI 181
G+ + D+ A + EM ++P T++ L+ ++ I ++ Y ++ G
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505
Query: 182 TKYVFMALINAYTTCGEFEKARQVVLD-AEIPVKSRSEVKSALVSALASHGRTSDAIIVY 240
+ Y F L++ G A ++ + AE VK + ++ G S A
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565
Query: 241 EEIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVHDPDYWMDGCCRL-ILHC-VRF 298
+E+ E G + + LI L G+ + ++ +H + ++ C +LH R
Sbjct: 566 KEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625
Query: 299 KQLSSATDLLKQLKDKFKDDEMAMEYHFSEIFCQIATTDPP----DVQIGLDLLQFIKDE 354
+L A + +++ + D ++ C D D ++ LL+ + D
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLV---------CYGVLIDGSLKHKDRKLFFGLLKEMHDR 676
Query: 355 LGLPPSRKCLDFLLGACVNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKS 414
GL P ++ A D K A IW N G N ++Y + +G
Sbjct: 677 -GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735
Query: 415 ASKLLSKM 422
A L SKM
Sbjct: 736 AEVLCSKM 743
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 122/282 (43%), Gaps = 4/282 (1%)
Query: 3 AKLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEF 62
K+ + P+ +Y LI C K+ AL + +MV L S NS+++ + +
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDI 453
Query: 63 NLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAI 122
+ + + L+P T+ S++ + A L ++ + P+ + +
Sbjct: 454 SAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTL 513
Query: 123 MAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKYYEQLK---SAGG 179
++G FR ++ A+ + EM + NVKP+ T++ +I E D+ K +E LK G
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 180 QITKYVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEV-KSALVSALASHGRTSDAII 238
Y + LI+ G+ +A+ V +E+ + L+ G+ +A+
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALS 633
Query: 239 VYEEIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVHD 280
V +E+ + G +L+ LI+ + LL+E+HD
Sbjct: 634 VCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/400 (18%), Positives = 170/400 (42%), Gaps = 38/400 (9%)
Query: 42 LVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAY 101
L+P T++++LH + F L ++ + ++P+ + +I ++KD A
Sbjct: 188 LLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAK 247
Query: 102 SLLDDLK----EMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYL 157
++ ++ ++N++P YN ++ G +K+ V A+ + K++ ++KPD T+ L
Sbjct: 248 EMIAHMEATGCDVNIVP----YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTL 303
Query: 158 IHNCSNEEDI---IKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVVLD-AEIPV 213
++ ++ ++ +++ ++ +L+ G+ E+A +V + V
Sbjct: 304 VYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGV 363
Query: 214 KSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVI--ALIEHLNSEGELNRL 271
V +AL+ +L + +A ++++ + + G L P V LI+ G+L+
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG--LRPNDVTYSILIDMFCRRGKLDTA 421
Query: 272 IQLLEEVHDP---------DYWMDGCCRLILHCVRFKQLSSATDLLKQLKDKFKDDEMAM 322
+ L E+ D + ++G HC +F +S+A + ++ +K + +
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLING------HC-KFGDISAAEGFMAEMINKKLEPTVVT 474
Query: 323 EYHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGLPPSRKCLDFLLGACVNARDLKRAHL 382
+C + L L + + G+ PS LL A ++ A
Sbjct: 475 YTSLMGGYCS-----KGKINKALRLYHEMTGK-GIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 383 IWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLLSKM 422
++ E + N ++Y M + + G+ A + L +M
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 109/273 (39%), Gaps = 12/273 (4%)
Query: 14 YKKLITYSCDLLKVHVALDVVEQMVQG----ELVPSTETINSILHACEESYEFNLVRRIY 69
Y L+ C K+ AL V ++MVQ +LV I+ L + F L++ ++
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 70 PMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRK 129
LKP+ + SMI K DF A+ + D + +P Y A++ G +
Sbjct: 675 ----DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Query: 130 KDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKYYEQLKSA---GGQITKYVF 186
V A ++ +M+ + P+ T+ + + E ++ +L +A G +
Sbjct: 731 GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATY 790
Query: 187 MALINAYTTCGEFEKARQVVLDA-EIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKE 245
LI + G E+A +++ V + +++ L AI ++ + E
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE 850
Query: 246 AGCNLEPRAVIALIEHLNSEGELNRLIQLLEEV 278
G + A LI GE+ + +L E+
Sbjct: 851 KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/216 (18%), Positives = 89/216 (41%), Gaps = 4/216 (1%)
Query: 3 AKLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEF 62
A+ + P+ +Y +I C+ + A + +++M + +VP T + ++H + +
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQA 593
Query: 63 NLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAI 122
+ + + N + N + ++ + + A S+ ++ + + Y +
Sbjct: 594 SEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVL 653
Query: 123 MAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDI---IKYYEQLKSAGG 179
+ G + KD + +LKEM +KPD ++ +I S D ++ + + G
Sbjct: 654 IDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGC 713
Query: 180 QITKYVFMALINAYTTCGEFEKARQVVLDAEIPVKS 215
+ + A+IN G F +V+ PV S
Sbjct: 714 VPNEVTYTAVINGLCKAG-FVNEAEVLCSKMQPVSS 748
Score = 33.9 bits (76), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 36/83 (43%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
++P +Y +I C V A+++ M + + P N+++H C + E
Sbjct: 818 VSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKAT 877
Query: 67 RIYPMICHHNLKPNSETFRSMIS 89
+ + L PN++T R+ S
Sbjct: 878 ELRNEMLRQGLIPNNKTSRTTTS 900
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/383 (18%), Positives = 161/383 (42%), Gaps = 47/383 (12%)
Query: 30 ALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRSMIS 89
L V +++ + P+ T +++ + + + + ++ +K N +T+ MI+
Sbjct: 468 GLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMIN 527
Query: 90 LNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKP 149
VK+KD+ +A+++ +D+ + + P +YN I++ + ++ A+ +KEM++ +P
Sbjct: 528 GFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRP 587
Query: 150 DSQTFSYLIHNCSNEEDI---IKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVV 206
++TF +IH + D+ ++ ++ ++ G T + F LIN + EKA +++
Sbjct: 588 TTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEIL 647
Query: 207 LDAEIP-VKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHLNSE 265
+ + V + + ++ AS G T A + ++ G +++ AL++
Sbjct: 648 DEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKS 707
Query: 266 GELNRLIQLLEEVHDPDYWMDGCCRLIL--HCVRFKQLSSATDLLKQLKDKFKDDEMAME 323
G + + + +E+ + + IL R + A DL++Q+K +
Sbjct: 708 GRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKE--------- 758
Query: 324 YHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGLPPSRKCLDFLLGACVNARDLKRAHLI 383
G+ P + AC A D+ RA
Sbjct: 759 --------------------------------GVKPDIHTYTSFISACSKAGDMNRATQT 786
Query: 384 WKEYENAGLPYNVLSYLWMYKAF 406
+E E G+ N+ +Y + K +
Sbjct: 787 IEEMEALGVKPNIKTYTTLIKGW 809
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 110/280 (39%), Gaps = 39/280 (13%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
+ P Y +I+ C + + A+ V++M + P+T T I+H +S +
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 609
Query: 67 RIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGY 126
++ M+ P TF +I+ V+ + + A +LD++ + Y IM GY
Sbjct: 610 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 669
Query: 127 FRKKD-----------------------------------VQGALMVLKEMEQANVKPDS 151
D +Q AL V KEM N+ +S
Sbjct: 670 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 729
Query: 152 QTFSYLIHNCSNEEDIIK---YYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVVLD 208
++ LI + D+ + +Q+K G + + + + I+A + G+ +A Q + +
Sbjct: 730 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 789
Query: 209 AE-IPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAG 247
E + VK + + L+ A A+ YEE+K G
Sbjct: 790 MEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMG 829
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 92/443 (20%), Positives = 180/443 (40%), Gaps = 48/443 (10%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSIL-------HACEES 59
ITP+S Y LI + AL V +M + + S T + I+ HA
Sbjct: 340 ITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAAD 399
Query: 60 YEFNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMY 119
Y F+ +RI+ + N+ + +I + + + + A +L+ +++E + ++Y
Sbjct: 400 YWFDEAKRIHKTL-------NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIY 452
Query: 120 NAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKYYEQ---LKS 176
+ +M GY D + L+V K +++ P T+ LI+ + I K E +K
Sbjct: 453 HTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKE 512
Query: 177 AGGQITKYVFMALINAYTTCGEFEKARQVVLD-AEIPVKSRSEVKSALVSALASHGRTSD 235
G + + +IN + ++ A V D + +K + + ++SA G
Sbjct: 513 EGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDR 572
Query: 236 AIIVYEEIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVHDPDYWMDGCC------ 289
AI +E+++ R + +I G++ R +++ + + GC
Sbjct: 573 AIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRC-----GCVPTVHTF 627
Query: 290 -RLILHCVRFKQLSSATDLLKQLKDKFKDDEM------AMEYHFSEIFCQIATTDPPDVQ 342
LI V +Q+ A ++L DEM A E+ +++I A+ D
Sbjct: 628 NGLINGLVEKRQMEKAVEIL---------DEMTLAGVSANEHTYTKIMQGYASVG--DTG 676
Query: 343 IGLDLLQFIKDELGLPPSRKCLDFLLGACVNARDLKRAHLIWKEYENAGLPYNVLSYLWM 402
+ +++E GL + LL AC + ++ A + KE +P N Y +
Sbjct: 677 KAFEYFTRLQNE-GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNIL 735
Query: 403 YKAFLASGNRKSASKLLSKMPKD 425
+ G+ A+ L+ +M K+
Sbjct: 736 IDGWARRGDVWEAADLIQQMKKE 758
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/383 (14%), Positives = 151/383 (39%), Gaps = 41/383 (10%)
Query: 78 KPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALM 137
KP+ F M+ + D A + ++ + PT+ +Y +++ Y +D+ AL
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 138 VLKEMEQANVKPDSQTFSYLIHNCS---NEEDIIKYYEQLKSAGGQITKYVFMALINAYT 194
+++M++ ++ T+S ++ S + E ++++ K + ++ +I A+
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 195 TCGEFEKARQVVLD-AEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPR 253
E+A +V + E + + + ++ ++V++ +KE C P
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKE--CGFTPT 483
Query: 254 AVI--ALIEHLNSEGELNRLIQLLEEVHDPD--YWMDGCCRLILHCVRFKQLSSATDLLK 309
V LI G++++ +++ + + + + +I V+ K ++A + +
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFE 543
Query: 310 QLKDKFKDDEMAMEYHFSEIFCQIATTD------------------------------PP 339
+ + ++ + + FC + D
Sbjct: 544 DMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSG 603
Query: 340 DVQIGLDLLQFIKDELGLPPSRKCLDFLLGACVNARDLKRAHLIWKEYENAGLPYNVLSY 399
D++ L++ ++ G P+ + L+ V R +++A I E AG+ N +Y
Sbjct: 604 DMRRSLEVFDMMR-RCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTY 662
Query: 400 LWMYKAFLASGNRKSASKLLSKM 422
+ + + + G+ A + +++
Sbjct: 663 TKIMQGYASVGDTGKAFEYFTRL 685
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/461 (19%), Positives = 183/461 (39%), Gaps = 59/461 (12%)
Query: 12 ASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPM 71
ASY +I + C L ++ A ++ M P + +++++ E + V ++ +
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 72 ICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKD 131
+ LKPNS + S+I L +I A ++ ++P +Y ++ G+ ++ D
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 132 VQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDII---KYYEQLKSAGGQITKYVFMA 188
++ A EM ++ PD T++ +I D++ K + ++ G + F
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 189 LINAYTTCGEFEKARQV------------------VLDA------------------EIP 212
LIN Y G + A +V ++D +I
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 213 VKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHLNSEGELNRLI 272
++ +++V+ L G +A+ + E + AG N + L++ GE+++
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 273 QLLEEVHDPDYWMDGCCRLILHCVRFKQLSSATDLLKQLKDKFKDDEMAMEYHFSEIFCQ 332
++L+E+ L V F L + L L +D E + + ++
Sbjct: 547 EILKEMLGKG--------LQPTIVTFNVLMNGFCLHGML----EDGEKLLNWMLAKGIAP 594
Query: 333 IATTDPPDVQI-----GLDLLQFIKDEL---GLPPSRKCLDFLLGACVNARDLKRAHLIW 384
ATT V+ L I ++ G+ P K + L+ AR++K A ++
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 385 KEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLLSKMPKD 425
+E + G +V +Y + K FL A ++ +M ++
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 4/209 (1%)
Query: 1 MHAKLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESY 60
MH++ +ITP +Y +I+ C + + A + +M L P + T +++ ++
Sbjct: 377 MHSR-DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 61 EFNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYN 120
R++ + PN T+ ++I K D DSA LL ++ ++ L P YN
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 121 AIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKYYEQLK---SA 177
+I+ G + +++ A+ ++ E E A + D+ T++ L+ ++ K E LK
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 178 GGQITKYVFMALINAYTTCGEFEKARQVV 206
G Q T F L+N + G E +++
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/188 (18%), Positives = 81/188 (43%), Gaps = 13/188 (6%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSI-----LHACEESYE 61
+ + +Y L+ C ++ A +++++M+ L P+ T N + LH E E
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 62 FNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNA 121
++ + + PN+ TF S++ + +A ++ D+ + P Y
Sbjct: 582 -----KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 122 IMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDII---KYYEQLKSAG 178
++ G+ + ++++ A + +EM+ T+S LI + + + ++Q++ G
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Query: 179 GQITKYVF 186
K +F
Sbjct: 697 LAADKEIF 704
>sp|Q8S9D1|PP395_ARATH Pentatricopeptide repeat-containing protein At5g21222
OS=Arabidopsis thaliana GN=ATC401 PE=2 SV=1
Length = 831
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 109/242 (45%), Gaps = 5/242 (2%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHA-CEESYEFNLV 65
+ P+ + L+ C+ K+ A ++V +M + P T N++ A
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAE 515
Query: 66 RRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAG 125
I P + H+ +KPN T ++++ + + A +KE+ + P ++N+++ G
Sbjct: 516 DMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG 575
Query: 126 YFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIK---YYEQLKSAGGQIT 182
+ D+ G V+ ME+ VKPD TFS L++ S+ D+ + Y + G
Sbjct: 576 FLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPD 635
Query: 183 KYVFMALINAYTTCGEFEKARQVVLDA-EIPVKSRSEVKSALVSALASHGRTSDAIIVYE 241
+ F L Y GE EKA Q++ + V+ + + ++S S G A+ VY+
Sbjct: 636 IHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYK 695
Query: 242 EI 243
++
Sbjct: 696 KM 697
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 128/312 (41%), Gaps = 41/312 (13%)
Query: 9 PSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRI 68
PS +Y L+T H L ++ ++ + L P T N+I++A ES + +I
Sbjct: 352 PSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 411
Query: 69 YPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLD-DLKEMNLMPTASMYNAIMAGYF 127
+ + KP + TF ++I KI + + LLD L++ L P N ++ +
Sbjct: 412 FEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWC 471
Query: 128 RKKDVQGALMVLKEMEQANVKPDSQTFSYLIH-------NCSNEEDII------------ 168
++ ++ A ++ +M+ VKPD TF+ L C+ E+ II
Sbjct: 472 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNV 531
Query: 169 --------------------KYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVV-L 207
+++ ++K G +VF +LI + + + +VV L
Sbjct: 532 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDL 591
Query: 208 DAEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHLNSEGE 267
E VK S L++A +S G +Y ++ E G + + A L + GE
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGE 651
Query: 268 LNRLIQLLEEVH 279
+ Q+L ++
Sbjct: 652 PEKAEQILNQMR 663
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/338 (18%), Positives = 146/338 (43%), Gaps = 24/338 (7%)
Query: 100 AYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIH 159
A+S+ + L E P+ Y ++ R+K L ++ ++E+ +KPD+ F+ +I+
Sbjct: 338 AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIIN 397
Query: 160 NCS---NEEDIIKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVV---LDAEIPV 213
S N + +K +E++K +G + T F LI Y G+ E++ +++ L E+ +
Sbjct: 398 ASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEM-L 456
Query: 214 KSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGC-------NLEPRAVIALIEHLNSEG 266
+ + LV A + + +A + +++ G N +A + +E
Sbjct: 457 QPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAED 516
Query: 267 ELNRLIQLLEEVHDPDYWMDGCCRLILHCVRFKQLSSATDLLKQLKDKFKDDEMAMEYHF 326
+ + ++L P+ + C ++ ++ A ++K+ + +
Sbjct: 517 MI--IPRMLHNKVKPN--VRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSL 572
Query: 327 SEIFCQIATTDPPDVQIGLDLLQFIKDELGLPPSRKCLDFLLGACVNARDLKRAHLIWKE 386
+ F I D G+ + + +E G+ P L+ A + D+KR I+ +
Sbjct: 573 IKGFLNINDMD------GVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTD 626
Query: 387 YENAGLPYNVLSYLWMYKAFLASGNRKSASKLLSKMPK 424
G+ ++ ++ + K + +G + A ++L++M K
Sbjct: 627 MLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRK 664
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/400 (18%), Positives = 151/400 (37%), Gaps = 88/400 (22%)
Query: 68 IYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYF 127
I+ + KP+ T+ ++++ + K F S SL+ +++ L P ++NAI+
Sbjct: 341 IFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASS 400
Query: 128 RKKDVQGALMVLKEMEQANVKPDSQTFSYLI----------------------------- 158
++ A+ + ++M+++ KP + TF+ LI
Sbjct: 401 ESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPND 460
Query: 159 HNCS-------NEEDIIKYYE---QLKSAGGQITKYVFMALINAYTTCGEFEKARQVVLD 208
C+ N+ I + + +++S G + F L AY G A +++
Sbjct: 461 RTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIP 520
Query: 209 AEIPVKSRSEVKS--ALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIE---HLN 263
+ K + V++ +V+ G+ +A+ + +KE G + +LI+ ++N
Sbjct: 521 RMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIN 580
Query: 264 SEGELNRLIQLLEEVH-DPDYWMDGCCRLILHCVRFKQLSSATDLLKQLKDKFKDDEMAM 322
+ ++ L+EE PD V F L +A + +K
Sbjct: 581 DMDGVGEVVDLMEEFGVKPD------------VVTFSTLMNAWSSVGDMKR--------- 619
Query: 323 EYHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGLPPSRKCLDFLLGACVNARDLKRAHL 382
C+ +I D+L E G+ P L A + ++A
Sbjct: 620 --------CE---------EIYTDML-----EGGIDPDIHAFSILAKGYARAGEPEKAEQ 657
Query: 383 IWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLLSKM 422
I + G+ NV+ Y + + ++G K A ++ KM
Sbjct: 658 ILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/161 (18%), Positives = 72/161 (44%), Gaps = 1/161 (0%)
Query: 6 EITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLV 65
++ P+ + ++ C+ K+ AL +M + + P+ NS++ + + V
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGV 585
Query: 66 RRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAG 125
+ ++ +KP+ TF ++++ + D + D+ E + P ++ + G
Sbjct: 586 GEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKG 645
Query: 126 YFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN-CSNEE 165
Y R + + A +L +M + V+P+ ++ +I CS E
Sbjct: 646 YARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGE 686
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 95/488 (19%), Positives = 179/488 (36%), Gaps = 77/488 (15%)
Query: 8 TPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRR 67
P + +Y +I K A ++E+ +PS N IL + + + +
Sbjct: 305 VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALK 364
Query: 68 IYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYF 127
++ + + PN T+ +I + + D+A+ L D +++ L P N ++
Sbjct: 365 VFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 128 RKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN---CSNEEDIIKYYEQLKSAGGQITKY 184
+ + + A + +EM+ PD TF LI +D K YE++ + +
Sbjct: 424 KSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSI 483
Query: 185 VFMALINAYTTCGEFEKARQVVLD----------------------AEIPVKSRS---EV 219
V+ +LI + G E ++ D A P K R+ E+
Sbjct: 484 VYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI 543
Query: 220 K-----------SALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHLNSEGEL 268
K S L+ L G ++ ++ +KE GC L+ RA +I+ G++
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV 603
Query: 269 NRLIQLLEEVH----DPDYWMDGCCRLILHCVRFKQLSSATDLLKQLKDKFKDDEMAMEY 324
N+ QLLEE+ +P G +I + +L A L ++ K K + + +
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYG--SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661
Query: 325 HFSEIFCQIATTDPP------------------------------DVQIGLDLLQFIKDE 354
+ F ++ D ++ L Q +K E
Sbjct: 662 SLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK-E 720
Query: 355 LGLPPSRKCLDFLLGACVNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKS 414
L P++ L+ R +A + W+E + G+ + +SY M +GN
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 780
Query: 415 ASKLLSKM 422
A L +
Sbjct: 781 AGALFDRF 788
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 119/267 (44%), Gaps = 23/267 (8%)
Query: 26 KVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFR 85
K+ DVV+ M + + P+ +++ A +++ ++ + +P F
Sbjct: 148 KLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFT 207
Query: 86 SMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQA 145
++I K DSA SLLD++K +L +YN + + + V A E+E
Sbjct: 208 TLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN 267
Query: 146 NVKPDSQTFSYLIH---NCSNEEDIIKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKA 202
+KPD T++ +I + ++ ++ +E L+ Y + +I Y + G+F++A
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327
Query: 203 RQVVLDAEIPVKSRSEVKSALVSALASH---------GRTSDAIIVYEEI-KEAGCNLEP 252
++ R K ++ S +A + G+ +A+ V+EE+ K+A NL
Sbjct: 328 YSLL--------ERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLST 379
Query: 253 RAVIALIEHLNSEGELNRLIQLLEEVH 279
+ LI+ L G+L+ +L + +
Sbjct: 380 YNI--LIDMLCRAGKLDTAFELRDSMQ 404
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 80/173 (46%), Gaps = 13/173 (7%)
Query: 14 YKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMIC 73
Y LI + ++ A ++E+++Q L P+ T NS+L A ++ E N ++C
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN-----EALVC 714
Query: 74 HHNLK-----PNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFR 128
++K PN T+ +I+ K++ F+ A+ ++++ + P+ Y +++G +
Sbjct: 715 FQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAK 774
Query: 129 KKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEE---DIIKYYEQLKSAG 178
++ A + + PDS ++ +I SN D +E+ + G
Sbjct: 775 AGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG 827
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/152 (19%), Positives = 68/152 (44%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
+TP+ ++ L+ +++ AL + M + + P+ T +++ + +FN
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747
Query: 67 RIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGY 126
+ + +KP++ ++ +MIS K + A +L D K +P ++ YNA++ G
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807
Query: 127 FRKKDVQGALMVLKEMEQANVKPDSQTFSYLI 158
A + +E + + ++T L+
Sbjct: 808 SNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 131/286 (45%), Gaps = 8/286 (2%)
Query: 6 EITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLV 65
EI P ++ LI+ S K+ A + ++M+ + P T T NS+++ + F+
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 66 RRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAG 125
+ ++ ++ P+ TF ++I + + K D LL ++ L+ + YN ++ G
Sbjct: 421 KHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 126 YFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN-CSNE--EDIIKYYEQLKSAGGQIT 182
+ ++ A + +EM V PD+ T + L++ C NE E+ ++ +E ++ + +
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 183 KYVFMALINAYTTCGEFEKARQVVLDAEI-PVKSRSEVKSALVSALASHGRTSDAIIVYE 241
+ +I+ + ++A + I V+ + + ++S SDA +++
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 242 EIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVHDPDYWMDG 287
++K+ G + LI GE+++ I+L+ E+ + D
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/231 (19%), Positives = 97/231 (41%), Gaps = 3/231 (1%)
Query: 5 LEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNL 64
L +P ++ +I C +V + ++ ++ + LV +T T N+++H E N
Sbjct: 426 LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 485
Query: 65 VRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMA 124
+ ++ + H + P++ T ++ + + + A L + ++ + YN I+
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Query: 125 GYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN-CSNE--EDIIKYYEQLKSAGGQI 181
G + V A + + V+PD QT++ +I C D + ++K G +
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Query: 182 TKYVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVKSALVSALASHGR 232
+ LI GE +K+ +++ + S +V+ L + GR
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGR 656
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 104/244 (42%), Gaps = 21/244 (8%)
Query: 13 SYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHA-CEES------------ 59
S+ LI CD K+ +L ++ + P T N++LH C E
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 60 --YEFNLVRRIYPMICHHNLKPNSETFRSMIS-LNVKIKDFDSAYSLLDDLKEMNLMPTA 116
F ++ + L P TF ++I+ L ++ + ++A +L++ + L
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA-ALVNKMVGKGLHIDV 261
Query: 117 SMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNC---SNEEDIIKYYEQ 173
Y I+ G + D + AL +L +ME+ ++KPD +S +I + D + +
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 174 LKSAGGQITKYVFMALINAYTTCGEFEKARQVVLDA-EIPVKSRSEVKSALVSALASHGR 232
+ G + + +I+ + + G + A++++ D E + +AL+SA G+
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 233 TSDA 236
+A
Sbjct: 382 LFEA 385
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/198 (19%), Positives = 88/198 (44%), Gaps = 7/198 (3%)
Query: 12 ASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSIL-HACEESYEFNLVRRIYP 70
+Y ++ C + AL+++ +M + + P ++I+ C++ + + + ++
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD-AQYLFS 320
Query: 71 MICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKK 130
+ + PN T+ MI + A LL D+ E + P +NA+++ ++
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 131 DVQGALMVLKEMEQANVKPDSQTFSYLIHN-CS-NEEDIIKYYEQLKSAGGQITKYVFMA 188
+ A + EM + PD+ T++ +I+ C N D K+ L ++ +T F
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVT---FNT 437
Query: 189 LINAYTTCGEFEKARQVV 206
+I+ Y ++ Q++
Sbjct: 438 IIDVYCRAKRVDEGMQLL 455
Score = 37.0 bits (84), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 354 ELGLPPSRKCLDFLL-GACVNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASGNR 412
E+GL P + L+ G C+ R L+ A L+ K GL +V++Y + G+
Sbjct: 219 EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMV-GKGLHIDVVTYGTIVNGMCKMGDT 277
Query: 413 KSASKLLSKMPKDDPHVR 430
KSA LLSKM ++ H++
Sbjct: 278 KSALNLLSKM--EETHIK 293
>sp|Q9SZ10|PP338_ARATH Pentatricopeptide repeat-containing protein At4g26680,
mitochondrial OS=Arabidopsis thaliana GN=At4g26680 PE=2
SV=1
Length = 521
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 106/220 (48%), Gaps = 6/220 (2%)
Query: 4 KLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFN 63
+L + SY LI C+ + AL + M + L P+ T N+++H + +
Sbjct: 266 RLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQ 325
Query: 64 LVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIM 123
+++ + N+ PN+ T+ ++I+ + D + A+ +D+ + YNA++
Sbjct: 326 EASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI 385
Query: 124 AGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLI-HNC--SNEEDIIKYYEQLKSAGGQ 180
G ++ + A +KE+++ N+ P+S TFS LI C N + + Y+ + +G
Sbjct: 386 FGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCH 445
Query: 181 ITKYVFMALINAYTTCGEFEKARQVV---LDAEIPVKSRS 217
+ F L++A+ +F+ A QV+ + IP+ SR+
Sbjct: 446 PNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRT 485
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 6/235 (2%)
Query: 24 LLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSET 83
L K A D QM +P+ E+ N+ + + ++ R Y + + PN T
Sbjct: 181 LKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYT 240
Query: 84 FRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEME 143
++S + D LL D++ + T YN ++AG+ K + AL + M
Sbjct: 241 LNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMG 300
Query: 144 QANVKPDSQTFSYLIHNCSNE---EDIIKYYEQLKSAGGQITKYVFMALINAYTTCGEFE 200
++ ++P+ TF+ LIH ++ K + ++K+ + LIN Y+ G+ E
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 201 KARQVVLDAEIPVKSRSEVK-SALVSALASHGRTSDAIIVYEEIKEAGCNLEPRA 254
A + D R + +AL+ L +T A +E+ + NL P +
Sbjct: 361 MAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKE--NLVPNS 413
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 3/167 (1%)
Query: 1 MHAKLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESY 60
M K + P+ ++ LI C +K+ A V +M + P+T T N++++ +
Sbjct: 298 MMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQG 357
Query: 61 EFNLVRRIYP-MICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMY 119
+ + R Y M+C+ ++ + T+ ++I K A + +L + NL+P +S +
Sbjct: 358 DHEMAFRFYEDMVCN-GIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTF 416
Query: 120 NAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN-CSNEE 165
+A++ G +K+ + K M ++ P+ QTF+ L+ C NE+
Sbjct: 417 SALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNED 463
Score = 40.0 bits (92), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 8/135 (5%)
Query: 13 SYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINS-ILHAC---EESYEFNLVRRI 68
+Y LI C K A V+++ + LVP++ T ++ I+ C F L + +
Sbjct: 380 TYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSM 439
Query: 69 YPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFR 128
CH PN +TF ++S + +DFD A +L ++ ++ + + + G
Sbjct: 440 IRSGCH----PNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKH 495
Query: 129 KKDVQGALMVLKEME 143
+ Q +L+EME
Sbjct: 496 QGKDQLVKKLLQEME 510
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/203 (18%), Positives = 79/203 (38%), Gaps = 8/203 (3%)
Query: 82 ETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKE 141
F S+ +K F +A +K+ +PT NA M+ + V AL +E
Sbjct: 169 RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE 228
Query: 142 MEQANVKPDSQTFSYLIHNCSNEEDI---IKYYEQLKSAGGQITKYVFMALINAYTTCGE 198
M + + P+ T + ++ + I+ + ++ G + T + LI + G
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 199 FEKARQVV-LDAEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVI- 256
A ++ + + ++ + L+ + +A V+ E+K N+ P V
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK--AVNVAPNTVTY 346
Query: 257 -ALIEHLNSEGELNRLIQLLEEV 278
LI + +G+ + E++
Sbjct: 347 NTLINGYSQQGDHEMAFRFYEDM 369
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 162/425 (38%), Gaps = 26/425 (6%)
Query: 2 HAKLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYE 61
H +LE T S+ + L+ C L V A++ M + P TET N IL
Sbjct: 147 HDRLE-TKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNR 205
Query: 62 FNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNA 121
Y + +K N TF MI++ K A L ++ + PT YN
Sbjct: 206 IENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNT 265
Query: 122 IMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKYYEQLKSAGGQI 181
++ G+ + ++GA +++ EM+ +PD QT++ ++ NE + ++K G
Sbjct: 266 LVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVP 325
Query: 182 TKYVFMALINAYTTCGEFEKA----RQVVLDAEIPVKSRSEVKSALVSALASHGRTSDAI 237
+ LI + G+ E A ++V +P + L+ L + A
Sbjct: 326 DSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPT---FYTYNTLIHGLFMENKIEAAE 382
Query: 238 IVYEEIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVHDPDYWMDGC-------CR 290
I+ EI+E G L+ LI G+ + L HD + DG
Sbjct: 383 ILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL----HD-EMMTDGIQPTQFTYTS 437
Query: 291 LILHCVRFKQLSSATDLLKQLKDKFKDDEMAMEYHFSEIFCQIATTDPPDVQIGLDLLQF 350
LI R + A +L +++ K ++ M + C I D LL+
Sbjct: 438 LIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDR-----AFSLLKE 492
Query: 351 IKDELGLPPSRKCLDFLLGACVNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASG 410
+ D + + P + L+ + A + E + G+ + +SY + + G
Sbjct: 493 M-DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKG 551
Query: 411 NRKSA 415
+ K A
Sbjct: 552 DTKHA 556
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 91/203 (44%), Gaps = 3/203 (1%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
I S +Y LI C A + ++M+ + P+ T S+++ +
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452
Query: 67 RIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGY 126
++ + +KP+ +++ + I + D A+SLL ++ M++ P YN +M G
Sbjct: 453 ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGL 512
Query: 127 FRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKYY---EQLKSAGGQITK 183
+ + A ++ EM++ +KPD +++ LI S + D + +++ S G T
Sbjct: 513 CGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL 572
Query: 184 YVFMALINAYTTCGEFEKARQVV 206
+ AL+ + E E A +++
Sbjct: 573 LTYNALLKGLSKNQEGELAEELL 595
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 70/155 (45%)
Query: 9 PSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRI 68
P L+ C + + A ++++M + P T N ++ +F R +
Sbjct: 465 PDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAREL 524
Query: 69 YPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFR 128
+ +KP+ ++ ++IS K D A+ + D++ + PT YNA++ G +
Sbjct: 525 MGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSK 584
Query: 129 KKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSN 163
++ + A +L+EM+ + P+ +F +I SN
Sbjct: 585 NQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 142/329 (43%), Gaps = 23/329 (6%)
Query: 8 TPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRR 67
+PS Y LI C + +V+ M VP+ T N+++H + +
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVS 313
Query: 68 IYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYF 127
+ + PN T+ ++I+ VK + A LL ++E +Y+ +++G F
Sbjct: 314 LLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLF 373
Query: 128 RKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNE---EDIIKYYEQLKSAGGQITKY 184
++ + A+ + ++M + KP+ +S L+ E + + ++ ++G Y
Sbjct: 374 KEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAY 433
Query: 185 VFMALINAYTTCGEFEKARQVVLDAEIPVKSRSE-VKSALVSALASHGRTSDAIIVYEEI 243
+ +L+ + G E+A QV + + SR++ S L+ L GR +A++V+ ++
Sbjct: 434 TYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKM 493
Query: 244 KEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEV-------HDPDY-----WMDGCCRL 291
G + A ++I+ L G ++ ++L E+ PD +DG C
Sbjct: 494 LTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQ 553
Query: 292 ILHCVRFKQLSSATDLLKQLKDKFKDDEM 320
K +S A DLL + D+ D ++
Sbjct: 554 -------KDISRAVDLLNSMLDRGCDPDV 575
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 118/293 (40%), Gaps = 9/293 (3%)
Query: 2 HAKLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYE 61
+ + I+P+ S+ +I C L V A++V M + + +P T +++ +
Sbjct: 178 NMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEER 237
Query: 62 FNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNA 121
+ + + P+ + +I K D L+D++ +P YN
Sbjct: 238 IDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT 297
Query: 122 IMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEE---DIIKYYEQLKSAG 178
++ G K + A+ +L+ M + P+ T+ LI+ + D ++ ++ G
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357
Query: 179 GQITKYVFMALINAYTTCGEFEKARQVVLD-AEIPVKSRSEVKSALVSALASHGRTSDAI 237
+ ++++ LI+ G+ E+A + AE K V S LV L G+ ++A
Sbjct: 358 YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAK 417
Query: 238 IVYEEIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVHDPDYWMDGCCR 290
+ + +GC +L++ G +Q+ +E+ GC R
Sbjct: 418 EILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDK-----TGCSR 465
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/360 (18%), Positives = 139/360 (38%), Gaps = 40/360 (11%)
Query: 110 MNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDI-- 167
MN+ P +N ++ + + V A+ V + M + PD T+ L+ EE I
Sbjct: 181 MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 168 -IKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVK-SALVS 225
+ ++++S G + ++ LI+ G+ + ++V + + +EV + L+
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIH 300
Query: 226 ALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVHDPDYWM 285
L G+ A+ + E + + C LI L + ++LL + + Y +
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL 360
Query: 286 DGCCRLILHCVRFKQLSS--ATDLLKQLKDKFKDDEMAMEYHFSEIFCQ----------- 332
+ +L FK+ + A L +++ +K + + + C+
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Query: 333 ---IATTDPPDVQIGLDLLQ-FIK--------------DELGLPPSRKCLDFLLGACVNA 374
IA+ P+ L++ F K D+ G ++ C L+
Sbjct: 421 NRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGV 480
Query: 375 RDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLLSKM-----PKDDPHV 429
+K A ++W + G+ + ++Y + K G+ +A KL +M PK P V
Sbjct: 481 GRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDV 540
Score = 33.1 bits (74), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 76 NLKPNSETFRSMISLNVKIKDFDSAYSLLDDL---KEMNLMPTASMYNAIMAGYFRKKDV 132
+KP++ + S+I I D+A L ++ +E P YN ++ G +KD+
Sbjct: 497 GIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDI 556
Query: 133 QGALMVLKEMEQANVKPDSQTFSYLIHNCSNEED 166
A+ +L M PD T + ++ S + +
Sbjct: 557 SRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN 590
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 175/431 (40%), Gaps = 34/431 (7%)
Query: 6 EITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLV 65
+ PS Y K I + L V L++ +M + PS N ++ + N
Sbjct: 174 DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDA 233
Query: 66 RRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAG 125
+++ + L P+ T+ ++I K + + ++ + + +K ++ P+ +N ++ G
Sbjct: 234 EQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKG 293
Query: 126 YFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN-CSNE--EDIIKYYEQLKSAGGQIT 182
F+ V+ A VLKEM+ PD+ TFS L SNE E + YE +G ++
Sbjct: 294 LFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMN 353
Query: 183 KYVFMALINAYTTCGEFEKARQVVLDAEIP--VKSRSEVKSALVSALASHGRTSDAIIVY 240
Y L+NA G+ EKA + +L E+ + + + ++ G A +
Sbjct: 354 AYTCSILLNALCKEGKIEKAEE-ILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKI 412
Query: 241 EEIKEAGC-------NLEPRAVIALIEHLNSEGELNRLIQLLEEVHDPDYWMDGCCRLIL 293
E +++ G N R L E N+E E+N++ ++ ++ LI
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKM-----KLKGVSPSVETYNILIG 467
Query: 294 HCVRFKQLSSATDLLKQLKDKFKDDEMAMEYHFSEIFCQIATTDPPDVQIGLDLL--QFI 351
R + D+LK+++D + C+ G LL Q +
Sbjct: 468 GYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK-----------GSKLLEAQIV 516
Query: 352 KDEL---GLPPSRKCLDFLLGACVNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLA 408
K ++ G+ P + + L+ C + ++ A KE G+ N+++Y +
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM 576
Query: 409 SGNRKSASKLL 419
+G A LL
Sbjct: 577 TGKLSEAEDLL 587
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 141/323 (43%), Gaps = 28/323 (8%)
Query: 7 ITPSSASYKKLITYSC---DLLKVHVALDVVEQMVQGELVPSTETINSILHA-CEESYEF 62
+ P+ Y +I C DL+ + ++ +E+ QG + P N ++ CE
Sbjct: 385 LVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK--QG-MKPDHLAYNCLIRRFCELGEME 441
Query: 63 NLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAI 122
N + + M + P+ ET+ +I + +FD + +L ++++ MP Y +
Sbjct: 442 NAEKEVNKMKLK-GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL 500
Query: 123 MAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNE---EDIIKYYEQLKSAGG 179
+ + + A +V ++ME V P + ++ LI C ++ ED ++ +++ G
Sbjct: 501 INCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGI 560
Query: 180 QITKYVFMALINAYTTCGEFEKARQVVLD-AEIPVKSRSEVKSALVSALASHGRTSDAII 238
++ + LI+ + G+ +A ++L+ + +K ++L+S G I
Sbjct: 561 ELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIA 620
Query: 239 VYEEIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVHD-----PDYWM-DGCCRLI 292
+YEE+K +G + LI EG I+L E + PD + +G +
Sbjct: 621 LYEEMKRSGIKPTLKTYHLLISLCTKEG-----IELTERLFGEMSLKPDLLVYNG----V 671
Query: 293 LHCVRF-KQLSSATDLLKQLKDK 314
LHC + A +L KQ+ +K
Sbjct: 672 LHCYAVHGDMEKAFNLQKQMIEK 694
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 175/442 (39%), Gaps = 54/442 (12%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
I PSS S L+ + + V ++V +++ + PS + A + +
Sbjct: 140 IYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGL 199
Query: 67 RIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGY 126
++ + H + P+ + +I K K + A L D++ L+P+ YN ++ GY
Sbjct: 200 ELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY 259
Query: 127 FRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN---CSNEEDIIKYYEQLKSAGGQITK 183
+ + + + V + M+ +++P TF+ L+ ED +++K G
Sbjct: 260 CKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDA 319
Query: 184 YVFMALINAYTTCGEFEKARQVVLDA-EIPVKSRSEVKSALVSALASHGRTSDAIIVYEE 242
+ F L + Y++ + E A V A + VK + S L++AL G+ A EE
Sbjct: 320 FTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA----EE 375
Query: 243 I--KEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVHDPDYWMDGCCRLILHCVRFKQ 300
I +E L P VI N +I DG CR +
Sbjct: 376 ILGREMAKGLVPNEVI-----------YNTMI-------------DGYCR------KGDL 405
Query: 301 LSSATDLLKQLKDKFKDDEMAMEYHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGLPPS 360
+ + + K K D +A FC++ + + ++ L+ G+ PS
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRR-FCELGEMENAEKEVNKMKLK------GVSPS 458
Query: 361 RKCLDFLLGACVNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLLS 420
+ + L+G + + I KE E+ G NV+SY + L G++ ++++
Sbjct: 459 VETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC-LCKGSKLLEAQIVK 517
Query: 421 KMPKD---DPHVR---FVIQAC 436
+ +D P VR +I C
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGC 539
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 123/314 (39%), Gaps = 41/314 (13%)
Query: 4 KLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFN 63
K + P +Y LI C+L ++ A V +M + PS ET N ++ YEF+
Sbjct: 417 KQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFD 476
Query: 64 LVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIM 123
I + + PN ++ ++I+ K A + D+++ + P +YN ++
Sbjct: 477 KCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI 536
Query: 124 AGYFRKKDVQGALMVLKEM-----------------------------------EQANVK 148
G K ++ A KEM + +K
Sbjct: 537 DGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLK 596
Query: 149 PDSQTFSYLIHN---CSNEEDIIKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQV 205
PD T++ LI N + I YE++K +G + T + LI+ T G R
Sbjct: 597 PDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTER-- 654
Query: 206 VLDAEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHLNSE 265
L E+ +K V + ++ A HG A + +++ E L+ +LI
Sbjct: 655 -LFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKV 713
Query: 266 GELNRLIQLLEEVH 279
G+L + L++E++
Sbjct: 714 GKLCEVRSLIDEMN 727
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 73/178 (41%), Gaps = 17/178 (9%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGE--LVPSTETINSILHACEESYEFNL 64
I P+ +Y LI+ L +++ E++ GE L P N +LH +
Sbjct: 630 IKPTLKTYHLLIS-----LCTKEGIELTERLF-GEMSLKPDLLVYNGVLHCYAVHGDMEK 683
Query: 65 VRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMA 124
+ + ++ + T+ S+I +K+ SL+D++ + P A YN I+
Sbjct: 684 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVK 743
Query: 125 GYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKYYEQLKSAGGQIT 182
G+ KD A + +EM++ +L+ C E + E+ +S +I
Sbjct: 744 GHCEVKDYMSAYVWYREMQEK---------GFLLDVCIGNELVSGLKEEWRSKEAEIV 792
Score = 33.9 bits (76), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/113 (19%), Positives = 57/113 (50%)
Query: 30 ALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRSMIS 89
A ++ +QM++ + T NS++ + + VR + + ++P ++T+ ++
Sbjct: 684 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVK 743
Query: 90 LNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEM 142
+ ++KD+ SAY +++E + + N +++G + + A +V+ EM
Sbjct: 744 GHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
>sp|Q9M316|PP292_ARATH Pentatricopeptide repeat-containing protein At3g61520,
mitochondrial OS=Arabidopsis thaliana GN=At3g61520 PE=2
SV=1
Length = 766
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 134/310 (43%), Gaps = 40/310 (12%)
Query: 9 PSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRI 68
P++ +Y LI C K+ A +VV +M + E+ P+ T+N+I+ + N+
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 69 YPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAG--- 125
+ + +K N T+ ++I + + + A + + E P A +Y A+++G
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 126 --------------------------------YFRKKDVQGALMVLKEMEQANVKPDSQT 153
+ K + + +L +ME+ KPDS T
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSIT 583
Query: 154 FSYLIHNCSNEED---IIKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVVLDAE 210
++ LI +D + + EQ++ G T + A+I+AY + GE ++A ++ D
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 211 I--PVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHLNSEGEL 268
+ V + + + L++A + G A+ + EE+K AL + LN + +
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 269 NRLIQLLEEV 278
L++L++E+
Sbjct: 704 ETLLKLMDEM 713
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 124/277 (44%), Gaps = 46/277 (16%)
Query: 8 TPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHA-CEESYEFNLVR 66
+P + Y LI+ C + + H A+ VVE++ +G N ++ C++ N
Sbjct: 508 SPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDK----NNTE 563
Query: 67 RIYPMIC---HHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIM 123
++Y M+ KP+S T+ ++IS K KDF+S +++ ++E L PT + Y A++
Sbjct: 564 KVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 124 AGYFRKKDVQGALMVLKEME-QANVKPDSQTFSYLIHNCSNEEDIIKYYEQLKSAGGQIT 182
Y ++ AL + K+M + V P++ +I+N
Sbjct: 624 DAYCSVGELDEALKLFKDMGLHSKVNPNT-----VIYNI--------------------- 657
Query: 183 KYVFMALINAYTTCGEFEKARQVVLDAEIP-VKSRSEVKSALVSALASHGRTSDAIIVYE 241
LINA++ G F +A + + ++ V+ E +AL L + + + +
Sbjct: 658 ------LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMD 711
Query: 242 EIKEAGCNLEPRAVIA--LIEHLNSEGELNRLIQLLE 276
E+ E C EP + L+E L+ EL +L + ++
Sbjct: 712 EMVEQSC--EPNQITMEILMERLSGSDELVKLRKFMQ 746
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 177/443 (39%), Gaps = 75/443 (16%)
Query: 4 KLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETI-------NSILHAC 56
+++I P + LI C +V AL+V E+M +G+ I N+++
Sbjct: 322 EVKIRPDVVTLGILINTLCKSRRVDEALEVFEKM-RGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 57 ------EESYEFNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEM 110
+E+ E LVR M PN+ T+ +I + ++A ++ +KE
Sbjct: 381 CKVGRLKEAEEL-LVR----MKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 111 NLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNC---SNEEDI 167
+ P N I+ G R + A++ +ME+ VK + T+ LIH C SN E
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Query: 168 IKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVKSALVSAL 227
+ +YE++ AG C DA+I AL+S L
Sbjct: 496 MYWYEKMLEAG-----------------CSP---------DAKI--------YYALISGL 521
Query: 228 ASHGRTSDAIIVYEEIKEAGCNLEPRAVIALI----EHLNSEGELNRLIQLLEEVHDPDY 283
R DAI V E++KE G +L+ A LI + N+E L + +E PD
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDS 581
Query: 284 WMDGCCRLILHCVRFKQLSSATDLLKQLKDKFKDDEMAMEYHFSEIFCQIATTDPPDVQI 343
LI + K S +++Q+++ D + + +C + D
Sbjct: 582 ITYNT--LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD------ 633
Query: 344 GLDLLQFIKDELGL----PPSRKCLDFLLGACVNARDLKRAHLIWKEYENAGLPYNVLSY 399
+ L+ KD +GL P+ + L+ A + +A + +E + + NV +Y
Sbjct: 634 --EALKLFKD-MGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 400 LWMYKAFLASGNRKSASKLLSKM 422
++K ++ KL+ +M
Sbjct: 691 NALFKCLNEKTQGETLLKLMDEM 713
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 94/194 (48%), Gaps = 19/194 (9%)
Query: 30 ALDVVEQMVQGELV--PSTETINSILHACEESYEFNLV--RRIYPMICH---HNLKPNSE 82
A V+++M+Q E V P+ T + +LH E ++ L+ +I +I H + PNS
Sbjct: 204 AFKVLDEMLQKESVFPPNRITADIVLH---EVWKGRLLTEEKIIALISRFSSHGVSPNSV 260
Query: 83 TFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEM 142
IS K ++A+ +L DL + A +NA+++ R D+ ++ +M
Sbjct: 261 WLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 143 EQANVKPDSQTFSYLIHN-CSNE--EDIIKYYEQL---KSAGGQITK---YVFMALINAY 193
++ ++PD T LI+ C + ++ ++ +E++ ++ G + K F LI+
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 194 TTCGEFEKARQVVL 207
G ++A ++++
Sbjct: 381 CKVGRLKEAEELLV 394
>sp|Q9LKU8|PP401_ARATH Pentatricopeptide repeat-containing protein At5g28460
OS=Arabidopsis thaliana GN=At5g28460 PE=2 SV=1
Length = 766
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 134/311 (43%), Gaps = 40/311 (12%)
Query: 8 TPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRR 67
P++ +Y LI C K+ A +VV +M + E+ P+ T+N+I+ + N+
Sbjct: 403 VPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 68 IYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAG-- 125
+ + +K N T+ ++I + + + A + + E P A +Y A+++G
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 126 ---------------------------------YFRKKDVQGALMVLKEMEQANVKPDSQ 152
+ K + + +L +ME+ KPDS
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSI 582
Query: 153 TFSYLIHNCSNEED---IIKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVVLDA 209
T++ LI +D + + EQ++ G T + A+I+AY + GE ++A ++ D
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Query: 210 EI--PVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHLNSEGE 267
+ V + + + L++A + G A+ + EE+K AL + LN + +
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
Query: 268 LNRLIQLLEEV 278
L++L++E+
Sbjct: 703 GETLLKLMDEM 713
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 177/443 (39%), Gaps = 75/443 (16%)
Query: 4 KLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETI-------NSILHAC 56
+++I P + LI C +V AL+V EQM +G+ I N+++
Sbjct: 322 EVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM-RGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 57 ------EESYEFNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEM 110
+E+ E LVR M PN+ T+ +I + ++A ++ +KE
Sbjct: 381 CKVGRLKEAEEL-LVR----MKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 111 NLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNC---SNEEDI 167
+ P N I+ G R + A++ +ME+ VK + T+ LIH C SN E
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Query: 168 IKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVKSALVSAL 227
+ +YE++ AG C DA+I AL+S L
Sbjct: 496 MYWYEKMLEAG-----------------CSP---------DAKI--------YYALISGL 521
Query: 228 ASHGRTSDAIIVYEEIKEAGCNLEPRAVIALI----EHLNSEGELNRLIQLLEEVHDPDY 283
R DAI V E++KE G +L+ A LI + N+E L + +E PD
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDS 581
Query: 284 WMDGCCRLILHCVRFKQLSSATDLLKQLKDKFKDDEMAMEYHFSEIFCQIATTDPPDVQI 343
LI + K S +++Q+++ D + + +C + D
Sbjct: 582 ITYNT--LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD------ 633
Query: 344 GLDLLQFIKDELGL----PPSRKCLDFLLGACVNARDLKRAHLIWKEYENAGLPYNVLSY 399
+ L+ KD +GL P+ + L+ A + +A + +E + + NV +Y
Sbjct: 634 --EALKLFKD-MGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 400 LWMYKAFLASGNRKSASKLLSKM 422
++K ++ KL+ +M
Sbjct: 691 NALFKCLNEKTQGETLLKLMDEM 713
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 94/194 (48%), Gaps = 19/194 (9%)
Query: 30 ALDVVEQMVQGELV--PSTETINSILHACEESYEFNLV--RRIYPMICH---HNLKPNSE 82
A V+++M+Q E V P+ T + +LH E ++ L+ +I +I H + PNS
Sbjct: 204 AFKVLDEMLQKESVFPPNRITADIVLH---EVWKERLLTEEKIIALISRFSSHGVSPNSV 260
Query: 83 TFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEM 142
IS K ++A+ +L DL + A +NA+++ R D+ ++ +M
Sbjct: 261 WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 143 EQANVKPDSQTFSYLIHN-CSNE--EDIIKYYEQL---KSAGGQITK---YVFMALINAY 193
++ ++PD T LI+ C + ++ ++ +EQ+ ++ G + K F LI+
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 194 TTCGEFEKARQVVL 207
G ++A ++++
Sbjct: 381 CKVGRLKEAEELLV 394
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 138/302 (45%), Gaps = 31/302 (10%)
Query: 16 KLITYSCD-----LLKVHVALDV---VEQMVQGELVPSTETINSILHACEESYEFNLVRR 67
KL SC LLK + + DV ++M++ ++ P+ T N +++A ++ + N R
Sbjct: 185 KLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARD 244
Query: 68 IYPMICHHNLKPNSETFRSMISLNVKIKDFDSAY---SLLDDLKEMNLMPTASMYNAIMA 124
+ + + PN ++ ++I K+ Y ++L ++ E ++ P + +N ++
Sbjct: 245 VMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILID 304
Query: 125 GYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDI---IKYYEQLKSAGGQI 181
G+++ ++ G++ V KEM +VKP+ +++ LI+ N I I +++ SAG Q
Sbjct: 305 GFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQP 364
Query: 182 TKYVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVKSA-----LVSALASHGRTSDA 236
+ ALIN + ++A LD VK + V + L+ A G+ D
Sbjct: 365 NLITYNALINGFCKNDMLKEA----LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDG 420
Query: 237 IIVYEEIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVHD---PDY-----WMDGC 288
+ EE++ G + LI L G + +L +++ PD M+G
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGY 480
Query: 289 CR 290
CR
Sbjct: 481 CR 482
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 127/314 (40%), Gaps = 44/314 (14%)
Query: 8 TPSSASYKKLITYSCDLL---KVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNL 64
+P+ SY LI C L K++ A V+++MV+ ++ P+ T N ++ +
Sbjct: 255 SPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPG 314
Query: 65 VRRIYPMICHHNLKPNSETFRSMI-----------------------------SLNVKIK 95
+++ + ++KPN ++ S+I + N I
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN 374
Query: 96 DF------DSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKP 149
F A + +K +PT MYN ++ Y + + + +EME+ + P
Sbjct: 375 GFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434
Query: 150 DSQTFSYLIHN-CSNE--EDIIKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVV 206
D T++ LI C N E K ++QL S G F L+ Y GE KA ++
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK-GLPDLVTFHILMEGYCRKGESRKAAMLL 493
Query: 207 LD-AEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEI-KEAGCNLEPRAVIALIEHLNS 264
+ +++ +K R + ++ G A + ++ KE + + L++ +
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553
Query: 265 EGELNRLIQLLEEV 278
+G+L LL E+
Sbjct: 554 KGKLEDANMLLNEM 567
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 7 ITPSSASYKKLITYSC--DLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNL 64
+ P+ +Y LI C D+LK ALD+ + VP+T N ++ A + + +
Sbjct: 362 VQPNLITYNALINGFCKNDMLKE--ALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDD 419
Query: 65 VRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMA 124
+ + + P+ T+ +I+ + + ++A L D L L P ++ +M
Sbjct: 420 GFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILME 478
Query: 125 GYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDI 167
GY RK + + A M+LKEM + +KP T++ ++ E ++
Sbjct: 479 GYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNL 521
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 69/183 (37%), Gaps = 37/183 (20%)
Query: 8 TPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRR 67
P++ Y LI C L K+ + E+M + +VP T N ++ + ++
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457
Query: 68 IYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMP------------- 114
++ + L P+ TF ++ + + A LL ++ +M L P
Sbjct: 458 LFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Query: 115 -----------------------TASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDS 151
+ YN ++ GY +K ++ A M+L EM + + P+
Sbjct: 517 KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 576
Query: 152 QTF 154
T+
Sbjct: 577 ITY 579
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 111/243 (45%), Gaps = 16/243 (6%)
Query: 30 ALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRSMIS 89
AL++ QM + ++ P + S+L+A + R I+ + L+ + S+ +
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265
Query: 90 LNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKP 149
+ K +A L D +K NL+ ++NA+++GY + + A+ + EM +V+P
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLI----LWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 150 DSQTFSYLIHNCS---NEEDIIKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQV- 205
D+ + + I C+ + E YE + + + ++ ALI+ + CG E AR V
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 206 --VLDAEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHLN 263
LD ++ V SA++ HGR +AI +Y ++ G + + L+ N
Sbjct: 382 DRTLDRDVV------VWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACN 435
Query: 264 SEG 266
G
Sbjct: 436 HSG 438
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 13/182 (7%)
Query: 87 MISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQAN 146
+I + D A + DDL + P +NAI+ GY R Q AL++ M+ A
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFP----WNAIIRGYSRNNHFQDALLMYSNMQLAR 114
Query: 147 VKPDSQTFSYLIHNCSNEEDIIK---YYEQLKSAGGQITKYVFMALINAYTTCGEFEKAR 203
V PDS TF +L+ CS + + Q+ G +V LI Y C AR
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174
Query: 204 QVVLDAEIPVKSRSEVK-SALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHL 262
V +P+ R+ V +A+VSA A +G +A+ ++ ++++ +++P V AL+ L
Sbjct: 175 TVF--EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM--DVKPDWV-ALVSVL 229
Query: 263 NS 264
N+
Sbjct: 230 NA 231
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 97/500 (19%), Positives = 178/500 (35%), Gaps = 79/500 (15%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
P + Y KLI+ C+ A+D + +M +P+ T +++L C + +
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357
Query: 67 RIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGY 126
R+ M+ P+ + F S++ D AY LL + + MP +YN ++
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417
Query: 127 FRKKD-----------------------------------------VQGALMVLKEMEQA 145
KD + A V++EM
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477
Query: 146 NVKPDSQTFSYLIH---NCSNEEDIIKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKA 202
PD+ T+S +++ N S E +E++K G Y + +++++ G E+A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 203 RQVVLDA-EIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEH 261
R+ + E+ +AL+ A + S A ++E + GC ALI+
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 262 LNSEGELNRLIQLLEEVHDPDYWMDGCCRLILHCVRFKQLSSATDLLKQLKDKFKDDEMA 321
G++ + Q+ E + K + KQ D + +
Sbjct: 598 HCKAGQVEKACQIFERMCGS-----------------KDVPDVDMYFKQYDDNSERPNVV 640
Query: 322 MEYHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGLPPSRKCLDFLLGACVNARDLKRAH 381
+ FC+ V+ LL + E G P++ D L+ L A
Sbjct: 641 TYGALLDGFCK-----SHRVEEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQ 694
Query: 382 LIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLLSKMPKDDPHVRFVIQA------ 435
+ E G P + +Y + + + ASK+LSKM ++ VI
Sbjct: 695 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 754
Query: 436 CK-----QTYTIPSLQKERG 450
CK + Y + + +E+G
Sbjct: 755 CKVGKTDEAYKLMQMMEEKG 774
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 151/364 (41%), Gaps = 63/364 (17%)
Query: 9 PSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRI 68
P +++Y K++ Y C+ K+ +A + E+M +G LV T ++ + ++ R+
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 69 YPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFR 128
+ + PN T+ ++I +K K A L + + +P Y+A++ G+ +
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 129 ----------------KKDVQGALMVLKEMEQANVKPDSQTFSYLIHN-CSNE--EDIIK 169
KDV M K+ + + +P+ T+ L+ C + E+ K
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 170 YYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQV------------------VLDAEI 211
+ + G + + V+ ALI+ G+ ++A++V ++D
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Query: 212 PVKSRSEVKSALVS-------------------ALASHGRTSDAIIVYEEIKEAGCNLEP 252
VK R ++ S ++S L G+T +A + + ++E GC
Sbjct: 721 KVK-RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 779
Query: 253 RAVIALIEHLNSEGELNRLIQLLEEVHD----PDYWMDGCCRLILHCVRFKQLSSATDLL 308
A+I+ G++ ++LLE + P+Y LI HC + L A +LL
Sbjct: 780 VTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV--LIDHCCKNGALDVAHNLL 837
Query: 309 KQLK 312
+++K
Sbjct: 838 EEMK 841
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 4/154 (2%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
+ P+ +Y+ LI + C + VA +++E+M Q T ++ + EF
Sbjct: 810 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESL 867
Query: 67 RIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMN--LMPTASMYNAIMA 124
+ I + P +R +I +K + + A LL+++ + L+ +S YN+++
Sbjct: 868 GLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIE 927
Query: 125 GYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLI 158
V+ A + EM + V P+ Q+F LI
Sbjct: 928 SLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLI 961
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 77/433 (17%), Positives = 178/433 (41%), Gaps = 35/433 (8%)
Query: 17 LITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHN 76
L+ C +AL+ + ++ PS T N ++ A ++ + I+ + N
Sbjct: 206 LVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLAN 265
Query: 77 LKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGAL 136
L+ + T R K+ + A +L++ N +P Y +++G + A+
Sbjct: 266 LRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAM 322
Query: 137 MVLKEMEQANVKPDSQTFSYLIHNCSNEEDI---IKYYEQLKSAGGQITKYVFMALINAY 193
L M + P+ T+S L+ C N++ + + + G + +F +L++AY
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 382
Query: 194 TTCGEFEKA----RQVVLDAEIPVKSRSEVKSALVSALASHGRTSDAIIV------YEEI 243
T G+ A +++V +P V + L+ ++ + + ++ Y E+
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHMP---GYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEM 439
Query: 244 KEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVHDPDYWMDGCC--RLILHCVRFKQL 301
AG L V + L S G+ + ++ E+ + D +++ + ++
Sbjct: 440 LAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM 499
Query: 302 SSATDLLKQLKDKFKDDEMAMEYHFS---EIFCQIATTDPPDVQIGLDLLQFIKDELGLP 358
A L +++K + +A Y ++ + FC+ + + + ++ E+G
Sbjct: 500 ELAFLLFEEMK---RGGLVADVYTYTIMVDSFCKAGLIE--QARKWFNEMR----EVGCT 550
Query: 359 PSRKCLDFLLGACVNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKL 418
P+ L+ A + A+ + A+ +++ + G N+++Y + +G + A ++
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610
Query: 419 LSKM--PKDDPHV 429
+M KD P V
Sbjct: 611 FERMCGSKDVPDV 623
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 171/408 (41%), Gaps = 28/408 (6%)
Query: 27 VHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHH-NLKPNSETFR 85
V AL V Q + P++ T NS++ + + V +Y +C+ + P++ T+
Sbjct: 178 VSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYS 237
Query: 86 SMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQA 145
++IS K+ DSA L D++K+ + PT +Y ++ YF+ V+ AL + +EM++A
Sbjct: 238 ALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRA 297
Query: 146 NVKPDSQTFSYLIHNCSNEEDIIKYYEQLKSA--GGQITKYVFM-ALINAYTTCGEFEKA 202
P T++ LI + + Y K G VF+ L+N G E+
Sbjct: 298 GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEEL 357
Query: 203 RQVVLDAEI-----PVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIA 257
V + + V S + V AL S S+ ++++K +
Sbjct: 358 TNVFSEMGMWRCTPTVVSYNTVIKAL---FESKAHVSEVSSWFDKMKADSVSPSEFTYSI 414
Query: 258 LIEHLNSEGELNRLIQLLEEVHDPDY--WMDGCCRLILHCVRFKQLSSATDLLKQLKDKF 315
LI+ + + + LLEE+ + + C LI + K+ +A +L K+LK+ F
Sbjct: 415 LIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENF 474
Query: 316 KDDE----MAMEYHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGLPPSRKCLDFLLGAC 371
+ M HF + + +DL +K++ G P + L+
Sbjct: 475 GNVSSRVYAVMIKHFGKC---------GKLSEAVDLFNEMKNQ-GSGPDVYAYNALMSGM 524
Query: 372 VNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLL 419
V A + A+ + ++ E G ++ S+ + F +G + A ++
Sbjct: 525 VKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMF 572
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/400 (18%), Positives = 163/400 (40%), Gaps = 48/400 (12%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
+ P+ Y L+ + KV ALD+ E+M + P+ T ++ ++ +
Sbjct: 264 MQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAY 323
Query: 67 RIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGY 126
Y + L P+ +++++ K+ + ++ ++ PT YN ++
Sbjct: 324 GFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKAL 383
Query: 127 FRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKYYEQLKSAGGQITKYVF 186
F K ++ ++ +++++K+ +++ +
Sbjct: 384 FESK-------------------------------AHVSEVSSWFDKMKADSVSPSEFTY 412
Query: 187 MALINAYTTCGEFEKARQVVLDAEIPVKSRSEVKSA---LVSALASHGRTSDAIIVYEEI 243
LI+ Y EKA ++L E+ K +A L++AL R A +++E+
Sbjct: 413 SILIDGYCKTNRVEKA--LLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
Query: 244 KEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVHD----PDYWMDGCCRLILHCVRFK 299
KE N+ R +I+H G+L+ + L E+ + PD + L+ V+
Sbjct: 471 KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNA--LMSGMVKAG 528
Query: 300 QLSSATDLLKQLKDKFKDDEMAMEYHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGLPP 359
++ A LL+++++ ++ + I A T P + +++ + IK G+ P
Sbjct: 529 MINEANSLLRKMEENGCRADIN---SHNIILNGFARTGVP--RRAIEMFETIKHS-GIKP 582
Query: 360 SRKCLDFLLGACVNARDLKRAHLIWKEYENAGLPYNVLSY 399
+ LLG +A + A + +E ++ G Y+ ++Y
Sbjct: 583 DGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITY 622
>sp|Q3E9F0|PP392_ARATH Pentatricopeptide repeat-containing protein At5g18475
OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1
Length = 506
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 127/284 (44%), Gaps = 11/284 (3%)
Query: 6 EITPSSASYKKLITYSC--DLLKVHV----ALDVVEQMVQGE-LVPSTETINSILHACEE 58
E+ S SY ITYS D L H A+++ E M+ E + P T N +++
Sbjct: 221 EMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCR 280
Query: 59 SYEFNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASM 118
+ E ++I + + PN + ++++ K+ A D++K+ L
Sbjct: 281 AGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVG 340
Query: 119 YNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNE---EDIIKYYEQLK 175
Y +M + R + A+ +L EM+ + + D+ T++ ++ S+E E+ ++ +Q
Sbjct: 341 YTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWG 400
Query: 176 SAGGQITKYVFMALINAYTTCGEFEKARQVV-LDAEIPVKSRSEVKSALVSALASHGRTS 234
S G + K + ++NA GE EKA + + + +E + + LV L G T
Sbjct: 401 SEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTE 460
Query: 235 DAIIVYEEIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEV 278
+ V G P++ A++E + E +L + +LL+ +
Sbjct: 461 IGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/283 (19%), Positives = 117/283 (41%), Gaps = 35/283 (12%)
Query: 5 LEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHAC--EESYEF 62
L + P++ + L+ + C ++ A VVE+M + + S L C S
Sbjct: 190 LGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSK 249
Query: 63 NLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAI 122
V MI + P+ TF MI+ + + + A +LD +K+ P Y+A+
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 123 MAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKYYEQLKSAGGQIT 182
M G+ + +Q A QTF +++K G ++
Sbjct: 310 MNGFCKVGKIQEA---------------KQTF-----------------DEVKKTGLKLD 337
Query: 183 KYVFMALINAYTTCGEFEKARQVVLDAEIP-VKSRSEVKSALVSALASHGRTSDAIIVYE 241
+ L+N + GE ++A +++ + + ++ + + ++ L+S GR+ +A+ + +
Sbjct: 338 TVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLD 397
Query: 242 EIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVHDPDYW 284
+ G +L + ++ L GEL + ++ L + + W
Sbjct: 398 QWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIW 440
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 110/226 (48%), Gaps = 17/226 (7%)
Query: 62 FNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLK-EMNLMPTASMYN 120
FNL++ I +KP+ + ++L + + + + LL K + L P ++N
Sbjct: 147 FNLIQVIA------RVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFN 200
Query: 121 AIMAGYFRKKDVQGALMVLKEMEQANVK-PDSQTFSYLIHNC----SNEEDIIKYYEQLK 175
++ + + D+ A +V++EM+++ + P+S T+S L+ +C S ++ ++ +E +
Sbjct: 201 ILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLM-DCLFAHSRSKEAVELFEDMI 259
Query: 176 SAGGQITKYV-FMALINAYTTCGEFEKARQVVLDAEIPVKSRSEV--KSALVSALASHGR 232
S G V F +IN + GE E+A++ +LD V SAL++ G+
Sbjct: 260 SKEGISPDPVTFNVMINGFCRAGEVERAKK-ILDFMKKNGCNPNVYNYSALMNGFCKVGK 318
Query: 233 TSDAIIVYEEIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEV 278
+A ++E+K+ G L+ L+ GE + ++LL E+
Sbjct: 319 IQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEM 364
>sp|Q7X6A5|PPR81_ARATH Pentatricopeptide repeat-containing protein At1g55630
OS=Arabidopsis thaliana GN=At1g55630 PE=2 SV=1
Length = 477
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 120/272 (44%), Gaps = 19/272 (6%)
Query: 9 PSSASYKKLITYSCDLLKVHVALDVVEQMVQGELV---PSTETINSILHACEESYEFNLV 65
P++A L+ +C + +A DVVEQ ++ + P + N+ILH+ ++ L+
Sbjct: 184 PTTACTFNLLICTCG--EAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLI 241
Query: 66 RRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAG 125
+Y + P+ T+ ++ N ++ D Y LLD++ + P YN ++
Sbjct: 242 DWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHH 301
Query: 126 YFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDI--IKYY-EQLKSAGGQIT 182
AL +L M + V+P F+ LI S + KY+ ++ G
Sbjct: 302 LATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPD 361
Query: 183 KYVFMALINAYTTCGEFEKA----RQVVLDAEIPVKSRSEVKSALVSALASHGRTSDAII 238
+ +I Y + GE EKA +++ ++P ++++ G+ +A
Sbjct: 362 VVCYTVMITGYISGGELEKAEEMFKEMTEKGQLP---NVFTYNSMIRGFCMAGKFKEACA 418
Query: 239 VYEEIKEAGCNLEPRAVI--ALIEHLNSEGEL 268
+ +E++ GCN P V+ L+ +L + G++
Sbjct: 419 LLKEMESRGCN--PNFVVYSTLVNNLKNAGKV 448
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 86/209 (41%), Gaps = 11/209 (5%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYE----F 62
TP +Y ++ + L K ++++MV+ P T N +LH +
Sbjct: 253 FTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAAL 312
Query: 63 NLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAI 122
NL+ + + ++P F ++I + ++ +D+ ++ P Y +
Sbjct: 313 NLLNHMREV----GVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVM 368
Query: 123 MAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN---CSNEEDIIKYYEQLKSAGG 179
+ GY +++ A + KEM + P+ T++ +I ++ ++++S G
Sbjct: 369 ITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGC 428
Query: 180 QITKYVFMALINAYTTCGEFEKARQVVLD 208
V+ L+N G+ +A +VV D
Sbjct: 429 NPNFVVYSTLVNNLKNAGKVLEAHEVVKD 457
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 118/262 (45%), Gaps = 12/262 (4%)
Query: 13 SYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMI 72
S+ +I+ + AL++ + M++ + P T+ +++ AC +S L R+++ I
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292
Query: 73 CHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDV 132
H N + ++I L K + ++A L + L +++ +N ++ GY
Sbjct: 293 DDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS----WNTLIGGYTHMNLY 348
Query: 133 QGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDI-----IKYYEQLKSAGGQITKYVFM 187
+ AL++ +EM ++ P+ T ++ C++ I I Y + G +
Sbjct: 349 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT 408
Query: 188 ALINAYTTCGEFEKARQVVLDAEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAG 247
+LI+ Y CG+ E A QV I KS S +A++ A HGR + ++ +++ G
Sbjct: 409 SLIDMYAKCGDIEAAHQVF--NSILHKSLSSW-NAMIFGFAMHGRADASFDLFSRMRKIG 465
Query: 248 CNLEPRAVIALIEHLNSEGELN 269
+ + L+ + G L+
Sbjct: 466 IQPDDITFVGLLSACSHSGMLD 487
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 103/248 (41%), Gaps = 33/248 (13%)
Query: 30 ALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRSMIS 89
AL + M+ L+P++ T +L +C +S F ++I+ + + S+IS
Sbjct: 118 ALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLIS 177
Query: 90 LNVKIKDFDSAYSLLDDLKEMNLMPTASM---------------------------YNAI 122
+ V+ + A+ + D +++ ++ +NA+
Sbjct: 178 MYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAM 237
Query: 123 MAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDI---IKYYEQLKSAGG 179
++GY + + AL + K+M + NV+PD T ++ C+ I + + + G
Sbjct: 238 ISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGF 297
Query: 180 QITKYVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVKSALVSALASHGRTSDAIIV 239
+ ALI+ Y+ CGE E A L +P K + L+ +A+++
Sbjct: 298 GSNLKIVNALIDLYSKCGELETA--CGLFERLPYKDVISWNT-LIGGYTHMNLYKEALLL 354
Query: 240 YEEIKEAG 247
++E+ +G
Sbjct: 355 FQEMLRSG 362
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 20/201 (9%)
Query: 51 SILHACEESYEFNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEM 110
S+LH C+ ++ I HN L+ + A S+ ++E
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97
Query: 111 NLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKY 170
NL+ ++N + G+ D AL + M + P+S TF +++ +C+ K
Sbjct: 98 NLL----IWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKS----KA 149
Query: 171 YEQLKSAGGQITK-------YVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVK-SA 222
+++ + G + K YV +LI+ Y G E A +V + R V +A
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS----PHRDVVSYTA 205
Query: 223 LVSALASHGRTSDAIIVYEEI 243
L+ AS G +A +++EI
Sbjct: 206 LIKGYASRGYIENAQKLFDEI 226
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 118/275 (42%), Gaps = 4/275 (1%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
+ P+ +Y +I C V A + ++++ EL+P+ +++ ++ E R
Sbjct: 265 VLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTAR 324
Query: 67 RIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGY 126
++ + + PN + +I + K + A LL +++ +NL P Y ++ G
Sbjct: 325 SLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGL 384
Query: 127 FRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN-CS--NEEDIIKYYEQLKSAGGQITK 183
+ V A + ++M+ + P S T++ LIH C N E + ++ ++G +
Sbjct: 385 CIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNI 444
Query: 184 YVFMALINAYTTCGEFEKARQVVLDAEIP-VKSRSEVKSALVSALASHGRTSDAIIVYEE 242
F LI+ Y + + A + + I + +AL+ A +A+ +Y +
Sbjct: 445 ITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSD 504
Query: 243 IKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEE 277
+ EAG + L++ EG L+ I +E
Sbjct: 505 MLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 3/207 (1%)
Query: 5 LEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNL 64
L ++P +Y LI C +V A + ++M + PS+ T NS++H + Y
Sbjct: 368 LNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQ 427
Query: 65 VRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMA 124
+ + ++PN TF ++I ++D +A L ++ ++P Y A++
Sbjct: 428 ALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID 487
Query: 125 GYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDI---IKYYEQLKSAGGQI 181
+F++ +++ AL + +M +A + P+ TF+ L+ E + I +Y++
Sbjct: 488 AHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCW 547
Query: 182 TKYVFMALINAYTTCGEFEKARQVVLD 208
F LI G +A + D
Sbjct: 548 NHVGFTCLIEGLCQNGYILRASRFFSD 574
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 145/360 (40%), Gaps = 20/360 (5%)
Query: 79 PNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMV 138
P+S+ S+++ V+ + FDS + + L+P +Y + F++ +
Sbjct: 162 PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL 221
Query: 139 LKEMEQANVKPDSQTFS-YLIHNCSNE--EDIIKYYEQLKSAGGQITKYVFMALINAYTT 195
L EM +KP+ ++ Y++ C + E+ K +E +K G Y + A+I+ Y
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCK 281
Query: 196 CGEFEKA----RQVVLDAEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLE 251
G +A +++++ +P V LV A ++ + + G +
Sbjct: 282 TGNVRQAYGLYKEILVAELLP---NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPN 338
Query: 252 PRAVIALIEHLNSEGELNRLIQLLEEVHDPDYWMDGCCRLIL---HCVRFKQLSSATDLL 308
LI G + + LL E+ + D IL C+ Q++ A L
Sbjct: 339 LYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIE-DQVAEANRLF 397
Query: 309 KQLKDKFKDDEMAMEYHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGLPPSRKCLDFLL 368
+++K++ A +C+ +++ LDL + G+ P+ L+
Sbjct: 398 QKMKNERIFPSSATYNSLIHGYCK-----EYNMEQALDLCSEMTAS-GVEPNIITFSTLI 451
Query: 369 GACVNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLLSKMPKDDPH 428
N RD+K A ++ E G+ +V++Y + A N K A +L S M + H
Sbjct: 452 DGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 86/203 (42%), Gaps = 3/203 (1%)
Query: 3 AKLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEF 62
K + P+ Y LI C + A+ ++ +M L P T +++ +
Sbjct: 331 VKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQV 390
Query: 63 NLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAI 122
R++ + + + P+S T+ S+I K + + A L ++ + P ++ +
Sbjct: 391 AEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450
Query: 123 MAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLI---HNCSNEEDIIKYYEQLKSAGG 179
+ GY +D++ A+ + EM + PD T++ LI +N ++ ++ Y + AG
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510
Query: 180 QITKYVFMALINAYTTCGEFEKA 202
+ F L++ + G A
Sbjct: 511 HPNDHTFACLVDGFWKEGRLSVA 533
Score = 38.5 bits (88), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 36/212 (16%), Positives = 90/212 (42%), Gaps = 4/212 (1%)
Query: 37 MVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKD 96
M+ LVP + C + ++ ++ + +KPN + I +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 97 FDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSY 156
+ A + + +K+ ++P Y+A++ GY + +V+ A + KE+ A + P+ F
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 157 LIHNCSNEEDII---KYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVVLDAE-IP 212
L+ +++ + + G YV+ LI+ + G +A ++ + E +
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 213 VKSRSEVKSALVSALASHGRTSDAIIVYEEIK 244
+ + L++ L + ++A +++++K
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMK 401
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 110/258 (42%), Gaps = 4/258 (1%)
Query: 9 PSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRI 68
P +Y LI C K+ A +V E+M G P T ++L ++ + + V++
Sbjct: 291 PDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQF 350
Query: 69 YPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFR 128
+ + P+ TF ++ K +F A+ LD +++ ++P YN ++ G R
Sbjct: 351 WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR 410
Query: 129 KKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDII---KYYEQLKSAGGQITKYV 185
+ AL + ME VKP + T+ I D + + +E++K+ G
Sbjct: 411 VHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 470
Query: 186 FMALINAYTTCGEFEKARQVVLD-AEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIK 244
A + + G +A+Q+ +I + S + ++ + G +AI + E+
Sbjct: 471 CNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM 530
Query: 245 EAGCNLEPRAVIALIEHL 262
E GC + V +LI L
Sbjct: 531 ENGCEPDVIVVNSLINTL 548
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 94/204 (46%), Gaps = 4/204 (1%)
Query: 6 EITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLV 65
+ +P++ +Y LI +++ A + E M+ P+ N +++ ++ E +
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 945
Query: 66 RRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAG 125
++ + ++P+ +T+ ++ + D +LKE L P YN I+ G
Sbjct: 946 CALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIING 1005
Query: 126 YFRKKDVQGALMVLKEMEQA-NVKPDSQTFSYLIHN---CSNEEDIIKYYEQLKSAGGQI 181
+ ++ AL++ EM+ + + PD T++ LI N E+ K Y +++ AG +
Sbjct: 1006 LGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1065
Query: 182 TKYVFMALINAYTTCGEFEKARQV 205
+ F ALI Y+ G+ E A V
Sbjct: 1066 NVFTFNALIRGYSLSGKPEHAYAV 1089
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 127/310 (40%), Gaps = 53/310 (17%)
Query: 5 LEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNL 64
L + P +Y LI + + +A DV Q+ +P T N +L A +S + +
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838
Query: 65 VRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDL-KEMNLMPTA------- 116
+ +Y + H + N+ T +IS VK + D A L DL + + PTA
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 117 ----------------------------SMYNAIMAGYFRKKDVQGALMVLKEMEQANVK 148
++YN ++ G+ + + A + K M + V+
Sbjct: 899 DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 958
Query: 149 PDSQTFSYLIHNC----SNEEDIIKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQ 204
PD +T+S L+ +C ++ + Y+++LK +G + +IN E+A
Sbjct: 959 PDLKTYSVLV-DCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA-- 1015
Query: 205 VVLDAEIPVKSRS-----EVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVI--A 257
+VL E+ SR ++L+ L G +A +Y EI+ AG LEP A
Sbjct: 1016 LVLFNEMKT-SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG--LEPNVFTFNA 1072
Query: 258 LIEHLNSEGE 267
LI + G+
Sbjct: 1073 LIRGYSLSGK 1082
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 42 LVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAY 101
LVP + T N ++ + E + ++ + + +P+ S+I+ K D A+
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAW 558
Query: 102 SLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN- 160
+ +KEM L PT YN ++AG + +Q A+ + + M Q P++ TF+ L
Sbjct: 559 KMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 618
Query: 161 CSNEE 165
C N+E
Sbjct: 619 CKNDE 623
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/223 (18%), Positives = 94/223 (42%), Gaps = 14/223 (6%)
Query: 34 VEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRSMISLNVK 93
+ +M + V + + N ++H +S +Y + +P+ +T+ S++ K
Sbjct: 176 LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGK 235
Query: 94 IKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQT 153
+D DS LL +++ + L P + + R + A +LK M+ PD T
Sbjct: 236 RRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 295
Query: 154 FSYLIH--------NCSNEEDIIKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQV 205
++ LI +C+ E +E++K+ + + ++ L++ ++ + + +Q
Sbjct: 296 YTVLIDALCTARKLDCAKE-----VFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQF 350
Query: 206 VLDAEIPVKSRSEVK-SALVSALASHGRTSDAIIVYEEIKEAG 247
+ E V + LV AL G +A + +++ G
Sbjct: 351 WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQG 393
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 139/351 (39%), Gaps = 16/351 (4%)
Query: 80 NSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVL 139
N+ ++ +I L +K + A + + P+ Y+++M G +++D+ + +L
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 140 KEMEQANVKPDSQTFSYLIHNCSNEEDIIKYYEQLK-----SAGGQITKYVFMALINAYT 194
KEME +KP+ TF+ I I + YE LK G + Y LI+A
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYT--VLIDALC 304
Query: 195 TCGEFEKARQVVLDAEIPVKSRSEVKSALVSALASHGRTSDAII-VYEEIKEAGCNLEPR 253
T + + A++V + V + S R D++ + E+++ G +
Sbjct: 305 TARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVV 364
Query: 254 AVIALIEHLNSEGELNRLIQLLEEVHDPDYW--MDGCCRLILHCVRFKQLSSATDLLKQL 311
L++ L G L+ + D + LI +R +L A +L +
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424
Query: 312 KDKFKDDEMAMEYHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGLPPSRKCLDFLLGAC 371
+ F + + + D L+ + +K + G+ P+ + L +
Sbjct: 425 ESLGVKPTAYTYIVFIDYYGKSG-----DSVSALETFEKMKTK-GIAPNIVACNASLYSL 478
Query: 372 VNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLLSKM 422
A + A I+ ++ GL + ++Y M K + G A KLLS+M
Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Score = 40.8 bits (94), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 26 KVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFR 85
+V A + +M + +L P+ T N++L ++ + ++ + PN+ TF
Sbjct: 553 RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN 612
Query: 86 SMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQA 145
++ K + A +L + +M +P YN I+ G + V+ A+ +M++
Sbjct: 613 TLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL 672
Query: 146 NVKPDSQTFSYLI 158
V PD T L+
Sbjct: 673 -VYPDFVTLCTLL 684
Score = 40.4 bits (93), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
+ P +Y L+ C + +V L +++ + L P N I++ +S+
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 67 RIY-PMICHHNLKPNSETFRSMISLNVKIKDF-DSAYSLLDDLKEMNLMPTASMYNAIMA 124
++ M + P+ T+ S+I LN+ I + A + ++++ L P +NA++
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLI-LNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075
Query: 125 GYFRKKDVQGALMVLKEMEQANVKPDSQTFSYL 157
GY + A V + M P++ T+ L
Sbjct: 1076 GYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/154 (16%), Positives = 68/154 (44%)
Query: 5 LEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNL 64
+ + P S +Y ++ + ++ A+ ++ +M++ P +NS+++ ++ +
Sbjct: 497 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDE 556
Query: 65 VRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMA 124
+++ + LKP T+ ++++ K A L + + + P +N +
Sbjct: 557 AWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 616
Query: 125 GYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLI 158
+ +V AL +L +M PD T++ +I
Sbjct: 617 CLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Score = 37.0 bits (84), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 58/327 (17%), Positives = 118/327 (36%), Gaps = 60/327 (18%)
Query: 9 PSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRI 68
PS +Y L+ + + ++++M L P+ T + + + N I
Sbjct: 221 PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 280
Query: 69 YPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFR 128
+ P+ T+ +I + D A + + +K P Y ++ +
Sbjct: 281 LKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD 340
Query: 129 KKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNE------------------------ 164
+D+ EME+ PD TF+ L+
Sbjct: 341 NRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHT 400
Query: 165 --------------EDIIKYYEQLKSAGGQITKYVFMALINAYTTCGE-------FEKAR 203
+D ++ + ++S G + T Y ++ I+ Y G+ FEK +
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMK 460
Query: 204 QVVLDAEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVI--ALIEH 261
+ I + S + +LA GR +A ++ +K+ G L P +V +++
Sbjct: 461 TKGIAPNIVACNAS------LYSLAKAGRDREAKQIFYGLKDIG--LVPDSVTYNMMMKC 512
Query: 262 LNSEGELNRLIQLLEEVHDPDYWMDGC 288
+ GE++ I+LL E+ + +GC
Sbjct: 513 YSKVGEIDEAIKLLSEMME-----NGC 534
>sp|Q9LS25|PP420_ARATH Pentatricopeptide repeat-containing protein At5g46580,
chloroplastic OS=Arabidopsis thaliana GN=At5g46580 PE=2
SV=1
Length = 711
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 133/287 (46%), Gaps = 13/287 (4%)
Query: 13 SYKKLITYS--CDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYP 70
+Y +IT + C+L + A++ E+M + L+P T ++IL +S + V +Y
Sbjct: 223 TYSTIITCAKRCNL--YNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYE 280
Query: 71 MICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKK 130
KP++ F + + + D+D +L ++K M++ P +YN ++ R
Sbjct: 281 RAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAG 340
Query: 131 DVQGALMVLKEMEQANVKPDSQTFSYLIH---NCSNEEDIIKYYEQLKSAGGQITKYVFM 187
A + EM +A + P+ +T + L+ D ++ +E++K+ + ++
Sbjct: 341 KPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYN 400
Query: 188 ALINAYTTCGEFEKARQVVLDAEIPVKSRSEVKS--ALVSALASHGRTSDAIIVYEEIKE 245
L+N G E+A ++ D + V+ R + S A+++ S G+ A+ ++EE+ +
Sbjct: 401 TLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLK 460
Query: 246 AGCNLEPRAVIALIEHLNSEGELNRLIQL----LEEVHDPDYWMDGC 288
AG + L++ L ++ ++ + ++ PD + GC
Sbjct: 461 AGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGC 507
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 107/245 (43%), Gaps = 9/245 (3%)
Query: 4 KLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFN 63
K + P +Y ++ KV L + E+ V P + + E+ +++
Sbjct: 249 KTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYD 308
Query: 64 LVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIM 123
+R + + ++KPN + +++ + A SL +++ E L P A++
Sbjct: 309 GIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALV 368
Query: 124 AGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSN---EEDIIKYYEQLK-SAGG 179
Y + + + AL + +EM+ D ++ L++ C++ EE+ + + +K S
Sbjct: 369 KIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQC 428
Query: 180 QITKYVFMALINAYTTCGEFEKARQV---VLDAEIPVKSRSEVKSALVSALASHGRTSDA 236
+ + + A++N Y + G+ EKA ++ +L A + V + LV L R D
Sbjct: 429 RPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMG--CTCLVQCLGKAKRIDDV 486
Query: 237 IIVYE 241
+ V++
Sbjct: 487 VYVFD 491
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 91/204 (44%), Gaps = 6/204 (2%)
Query: 47 ETI--NSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLL 104
ETI N + + +F L+ + + ++ ++ T+ ++I+ + ++ A
Sbjct: 185 ETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWF 244
Query: 105 DDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYL--IHNCS 162
+ + + LMP Y+AI+ Y + V+ L + + KPD+ FS L + +
Sbjct: 245 ERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEA 304
Query: 163 NEEDIIKYY-EQLKSAGGQITKYVFMALINAYTTCGEFEKARQVVLDA-EIPVKSRSEVK 220
+ D I+Y +++KS + V+ L+ A G+ AR + + E + +
Sbjct: 305 GDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTL 364
Query: 221 SALVSALASHGRTSDAIIVYEEIK 244
+ALV DA+ ++EE+K
Sbjct: 365 TALVKIYGKARWARDALQLWEEMK 388
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 127/286 (44%), Gaps = 11/286 (3%)
Query: 4 KLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQ---GELVPSTETINSILHACEESY 60
+L P+ SY L+ CD + AL+++ M G P + ++++ +
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 61 EFNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYN 120
+ + Y + + P+ T+ S+I+ K + D A +L+ + + +MP YN
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 121 AIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLI-HNCSNEE--DIIKYYEQLKSA 177
+I+ GY + A+ LK+M V+PD T+S L+ + C N + K ++ +
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Query: 178 GGQITKYVFMALINAYTTCGEFEKARQVV-LDAEIPVKSRSEVKSALVSALASHGRTSDA 236
G + + L+ Y T G + ++ L + V S L+ A A G+ A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 237 IIVYEEIKEAGCNLEPRAVI--ALIEHLNSEGELNRLIQLLEEVHD 280
++V+ ++++ G N P AV A+I L G + + E++ D
Sbjct: 391 MLVFSKMRQQGLN--PNAVTYGAVIGILCKSGRVEDAMLYFEQMID 434
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/319 (19%), Positives = 125/319 (39%), Gaps = 39/319 (12%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHA----------- 55
+ P++ +Y +I C +V A+ EQM+ L P NS++H
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 461
Query: 56 -----------CEESYEFNLV-------------RRIYPMICHHNLKPNSETFRSMISLN 91
C + FN + +++ ++ +KPN T+ ++I+
Sbjct: 462 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGY 521
Query: 92 VKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDS 151
D A LL + + L P Y+ ++ GY + ++ AL++ KEME + V PD
Sbjct: 522 CLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDI 581
Query: 152 QTFSYLIHNCSNEEDII---KYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVVLD 208
T++ ++ + Y ++ +G QI + +++ + A Q+ +
Sbjct: 582 ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQN 641
Query: 209 -AEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHLNSEGE 267
+ +K + + ++ AL GR +A ++ G + E++ +G
Sbjct: 642 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 701
Query: 268 LNRLIQLLEEVHDPDYWMD 286
L L QL + D +D
Sbjct: 702 LEELDQLFLSMEDNGCTVD 720
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/280 (17%), Positives = 107/280 (38%), Gaps = 39/280 (13%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
+ P +Y L+ Y C + A + + M + L P T ++L +
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356
Query: 67 RIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGY 126
+ ++ + + P+ F +I K D A + +++ L P A Y A++
Sbjct: 357 GLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416
Query: 127 FRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN----------------------CSN- 163
+ V+ A++ ++M + P + ++ LIH C N
Sbjct: 417 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 476
Query: 164 ------------EEDII---KYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVVLD 208
E +I K +E + G + + LIN Y G+ ++A +++
Sbjct: 477 IFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSG 536
Query: 209 -AEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAG 247
+ +K + S L++ R DA+++++E++ +G
Sbjct: 537 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 113/251 (45%), Gaps = 10/251 (3%)
Query: 4 KLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFN 63
K P +Y LI C K+ A + ++M + L+P+ +++H + E +
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
Query: 64 LVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIM 123
L++ Y + L+P+ + ++++ K D +A +++D + L P Y ++
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI 422
Query: 124 AGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKYYEQLKS---AGGQ 180
G+ R DV+ AL + KEM+Q ++ D FS L+ E +I L+ AG +
Sbjct: 423 DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIK 482
Query: 181 ITKYVFMALINAYTTCGE----FEKARQVVLDAEIPVKSRSEVKSALVSALASHGRTSDA 236
+ +++A+ G+ F+ +++ D +P V L++ L G+ +A
Sbjct: 483 PDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNV---LLNGLCKLGQMKNA 539
Query: 237 IIVYEEIKEAG 247
++ + + G
Sbjct: 540 DMLLDAMLNIG 550
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 107/239 (44%), Gaps = 15/239 (6%)
Query: 66 RRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAG 125
++++ I +L+P +F ++I+ K+ + D + L +++ P Y+A++
Sbjct: 260 QKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINA 319
Query: 126 YFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCS--NEEDIIK-YYEQLKSAGGQIT 182
++ + GA + EM + + P+ F+ LIH S E D++K Y+++ S G Q
Sbjct: 320 LCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPD 379
Query: 183 KYVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSE--VKSALVSALASHGRTSDAIIVY 240
++ L+N + G+ AR +V D I R + + L+ G A+ +
Sbjct: 380 IVLYNTLVNGFCKNGDLVAARNIV-DGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIR 438
Query: 241 EEIKEAGCNLEPRAVIALIEHLNSEGEL----NRLIQLLEEVHDPD-----YWMDGCCR 290
+E+ + G L+ AL+ + EG + L ++L PD MD C+
Sbjct: 439 KEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCK 497
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 110/256 (42%), Gaps = 18/256 (7%)
Query: 3 AKLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEF 62
K + P+ S+ LI C + + + QM + P T +++++A + +
Sbjct: 267 TKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKM 326
Query: 63 NLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAI 122
+ ++ +C L PN F ++I + + + D + L P +YN +
Sbjct: 327 DGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTL 386
Query: 123 MAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDI---IKYYEQLKSAGG 179
+ G+ + D+ A ++ M + ++PD T++ LI D+ ++ +++ G
Sbjct: 387 VNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI 446
Query: 180 QITKYVFMALINAYTTCGEFEKARQVVLDAEIPVKS--RSEVK------SALVSALASHG 231
++ + F AL+ CG ++ R V+DAE ++ R+ +K + ++ A G
Sbjct: 447 ELDRVGFSALV-----CGMCKEGR--VIDAERALREMLRAGIKPDDVTYTMMMDAFCKKG 499
Query: 232 RTSDAIIVYEEIKEAG 247
+ +E++ G
Sbjct: 500 DAQTGFKLLKEMQSDG 515
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 2/173 (1%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHA-CEESYEFNLV 65
+ P +Y LI C V AL++ ++M Q + ++++ C+E +
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 66 RRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAG 125
R + M+ +KP+ T+ M+ K D + + LL +++ +P+ YN ++ G
Sbjct: 471 RALREML-RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNG 529
Query: 126 YFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKYYEQLKSAG 178
+ ++ A M+L M V PD T++ L+ + K Y Q G
Sbjct: 530 LCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIG 582
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 160/410 (39%), Gaps = 87/410 (21%)
Query: 85 RSMISLNVKIKDFDSAYSLLDDLKEMNLMPTAS-MYNAIMAGYFRKKDVQGALMVLKEME 143
+S+I L V K +SA S+ L EM + P + +A+M Y + A+ +
Sbjct: 138 QSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSR 197
Query: 144 QANVKPDSQTFSYLIHNCSNEED----------IIKYYEQLKSAGGQITKYVFMALINAY 193
+ F I C N D I +Y ++ AG + YVF L+N +
Sbjct: 198 K-------HRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKF 250
Query: 194 TTCGEFEKARQVV---------------------------LDAEIPVKSRSE-------- 218
G A++V LD +K + E
Sbjct: 251 CKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDV 310
Query: 219 -VKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVI--ALIEHLNSEGELNRLIQ-- 273
SAL++AL + A +++E+ + G L P VI LI + GE++ + +
Sbjct: 311 FTYSALINALCKENKMDGAHGLFDEMCKRG--LIPNDVIFTTLIHGHSRNGEIDLMKESY 368
Query: 274 --LLEEVHDPDYWM-----DGCCRLILHCVRFKQLSSATDLLKQLKDKFKDDEMAMEYHF 326
+L + PD + +G C + L +A +++ + + +
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFC-------KNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 327 SEIFCQIATTDPPDVQIGLDLLQFIKDELGLPPSRKCLDFLL-GACVNAR--DLKRAHLI 383
+ FC+ DV+ L++ + + D+ G+ R L+ G C R D +RA
Sbjct: 422 IDGFCRGG-----DVETALEIRKEM-DQNGIELDRVGFSALVCGMCKEGRVIDAERA--- 472
Query: 384 WKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLLSKMPKDDPHVRFVI 433
+E AG+ + ++Y M AF G+ ++ KLL +M + D HV V+
Sbjct: 473 LREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM-QSDGHVPSVV 521
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/439 (20%), Positives = 179/439 (40%), Gaps = 20/439 (4%)
Query: 9 PSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRI 68
P + +Y L+ AL V+++M + + T N ++ A + +
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 69 YPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFR 128
M+ + PN+ T+ ++I K D A L +KE +P YNA+++ +
Sbjct: 374 IEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Query: 129 KKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSN---EEDIIKYYEQLKSAGGQITKYV 185
K + +L +M+ P+ T++ ++ C N ++ + + + ++KS G + +
Sbjct: 434 KSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDT 493
Query: 186 FMALINAYTTCG-EFEKARQVVLDAEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIK 244
F LI+AY CG E + ++ + +AL++ALA G V ++K
Sbjct: 494 FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK 553
Query: 245 EAGCNLEPRAVIALIEHLNSEGE---LNRLIQLLEEVHDPDYWMDGCCRLILHCVRFKQL 301
G + +++ G + R+ ++E WM L+L + + L
Sbjct: 554 SKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWML-LRTLLLANFKCRAL 612
Query: 302 SSATDLLKQLKDKFKDDEMAMEYHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGLPPSR 361
+ + K +M + IF + D + +L+ I+++ GL P
Sbjct: 613 AGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAE-----GILESIRED-GLSPDL 666
Query: 362 KCLDFLLGACVNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLLSK 421
+ L+ V + +A I K E + L +++SY + K F G + A ++LS+
Sbjct: 667 VTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSE 726
Query: 422 MPKDDPHVRFVIQACKQTY 440
M + I+ C TY
Sbjct: 727 MTERG------IRPCIFTY 739
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 89/183 (48%), Gaps = 4/183 (2%)
Query: 28 HVALDVVEQMV-QGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRS 86
++ ++ +E + +G++ PS + ++L A + R + + H KP+ F S
Sbjct: 577 YLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNS 636
Query: 87 MISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQAN 146
M+S+ + +D A +L+ ++E L P YN++M Y R+ + A +LK +E++
Sbjct: 637 MLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ 696
Query: 147 VKPDSQTFSYLIHNCSNE---EDIIKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKAR 203
+KPD +++ +I ++ ++ ++ G + + + ++ YT G F +
Sbjct: 697 LKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIE 756
Query: 204 QVV 206
V+
Sbjct: 757 DVI 759
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 138/353 (39%), Gaps = 50/353 (14%)
Query: 93 KIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFR-KKDVQGALMVLKEMEQANVKPDS 151
+ ++ A L + +KEM PT YN I+ + + + + L VL EM +K D
Sbjct: 222 RTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDE 281
Query: 152 QTFSYLIHNCSNE---EDIIKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVVLD 208
T S ++ C+ E + +++ +LKS G + + AL+ + G + +A V+ +
Sbjct: 282 FTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE 341
Query: 209 A-EIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHLNSEGE 267
E + S + LV+A G + +A V E + + G +I+ G+
Sbjct: 342 MEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGK 401
Query: 268 LNRLIQLLEEVHDPDYWMDGCCRLILHCVRFKQLSSATDLLKQLKDKFKDDEMAMEYHFS 327
+ ++L + + GC + +L L K + +EM
Sbjct: 402 EDEALKLFYSMKEA-----GC---------VPNTCTYNAVLSLLGKKSRSNEMI------ 441
Query: 328 EIFCQIATTDPPDVQIGLDLLQFIKDELGLPPSRKCLDFLLGACVNARDLKRAHLIWKEY 387
++ C + + G P+R + +L C N K + +++E
Sbjct: 442 KMLCDMKSN-------------------GCSPNRATWNTMLALCGNKGMDKFVNRVFREM 482
Query: 388 ENAGLPYNVLSYLWMYKAFLASGNRKSASKLLSKMPKDDPHVRFVIQACKQTY 440
++ G + ++ + A+ G+ ASK+ +M R AC TY
Sbjct: 483 KSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM------TRAGFNACVTTY 529
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 31 LDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRSMISL 90
L V+++M L T +++L AC + + + +P + T+ +++ +
Sbjct: 266 LGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQV 325
Query: 91 NVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPD 150
K + A S+L +++E + + YN ++A Y R + A V++ M + V P+
Sbjct: 326 FGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPN 385
Query: 151 SQTFSYLI---HNCSNEEDIIKYYEQLKSAG 178
+ T++ +I E++ +K + +K AG
Sbjct: 386 AITYTTVIDAYGKAGKEDEALKLFYSMKEAG 416
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 122/288 (42%), Gaps = 40/288 (13%)
Query: 1 MHAKLE---ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACE 57
M+ K++ + P+ +Y ++ C + A V ++M + + + T N+++
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLC 314
Query: 58 ESYEFNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTAS 117
+ N ++ + + PN T+ ++I + A SL DLK L P+
Sbjct: 315 REMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLV 374
Query: 118 MYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKYYEQLKSA 177
YN +++G+ RK D GA ++KEME+ +KP T++ LI + +++
Sbjct: 375 TYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNM---------- 424
Query: 178 GGQITKYVFMALINAYTTCGEFEKARQVVLDA-EIPVKSRSEVKSALVSALASHGRTSDA 236
EKA Q+ L E+ + S L+ G+ ++A
Sbjct: 425 ----------------------EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Query: 237 IIVYEEIKEAGCNLEPRAVI--ALIEHLNSEGELNRLIQLLEEVHDPD 282
+++ + E C EP VI +I EG R ++LL+E+ + +
Sbjct: 463 SRLFKSMVEKNC--EPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/461 (19%), Positives = 180/461 (39%), Gaps = 63/461 (13%)
Query: 30 ALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICH--------------- 74
A ++ Q++ G++ T +S+LH ES R+Y +I +
Sbjct: 58 AQSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYF 117
Query: 75 -----HNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRK 129
+ P S F +++ V F+ +S ++ K ++ S + ++ G
Sbjct: 118 NEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYS-FGILIKGCCEA 176
Query: 130 KDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIK---YYEQLKSAGGQITKYVF 186
+++ + +L E+ + P+ ++ LI C + +I K + ++ G + +
Sbjct: 177 GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTY 236
Query: 187 MALINAYTTCG----EFEKARQVVLDAEIPVKSRSEVKSALVSALASHGRTSDAIIVYEE 242
LIN G FE ++ D P + +++ L GRT DA V++E
Sbjct: 237 TVLINGLFKNGVKKQGFEMYEKMQEDGVFP---NLYTYNCVMNQLCKDGRTKDAFQVFDE 293
Query: 243 IKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVH----DPDY-----WMDGCCRLIL 293
++E G + LI L E +LN ++++++ +P+ +DG C +
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV-- 351
Query: 294 HCVRFKQLSSATDLLKQLKDKFKDDEMAMEYHFSEIFCQIATTDPPDVQIGLDLLQFIK- 352
+L A L + LK + + FC+ T + +K
Sbjct: 352 -----GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAA--------KMVKE 398
Query: 353 -DELGLPPSRKCLDFLLGACVNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASGN 411
+E G+ PS+ L+ + ++++A + E GL +V +Y + F G
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 412 RKSASKLLSKM------PKDDPHVRFVIQACKQTYTIPSLQ 446
AS+L M P + + ++ CK+ + +L+
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALK 499
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 1/161 (0%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
I PS +Y LI + A+ + M + LVP T + ++H + N
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 67 RIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGY 126
R++ + N +PN + +MI K A LL +++E L P + Y ++
Sbjct: 464 RLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVL 523
Query: 127 FRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDI 167
+++ + A ++++M + + P + S LI N+ +
Sbjct: 524 CKERKSKEAERLVEKMIDSGIDPSTSILS-LISRAKNDSHV 563
>sp|Q9LNP2|PPR47_ARATH Putative pentatricopeptide repeat-containing protein At1g17630
OS=Arabidopsis thaliana GN=PCMP-E72 PE=3 SV=1
Length = 731
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 134/317 (42%), Gaps = 33/317 (10%)
Query: 30 ALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRSMIS 89
AL++ M Q L + IL AC F L R + + LK N +++
Sbjct: 142 ALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLT 201
Query: 90 LNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKP 149
L K AY+L ++ N M +N ++ G+ ++ D + A+ + + M++ KP
Sbjct: 202 LYPKAGRMGDAYNLFVEMPVRNRMS----WNVMIKGFSQEYDCESAVKIFEWMQREEFKP 257
Query: 150 DSQTFSYLIH---NCSNEEDIIKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVV 206
D T++ ++ C ED++KY+ ++ +G ++ AL ++ C E E
Sbjct: 258 DEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSG---EALAVFFSVCAELEALSIAE 314
Query: 207 LDAEIPVKSRSE----VKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHL 262
+K E ++AL+ G+ DA ++ +I+ G + +LI
Sbjct: 315 KVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGI----ESWNSLITSF 370
Query: 263 NSEGELNRLIQLLEEVHDPDYWMDGCCRLILHCVRFKQLSSATDLLKQLKDKFKDDEMAM 322
G+L+ + L E+ + M+ C + + V + T ++K + + D+ ++
Sbjct: 371 VDAGKLDEALSLFSELEE----MNHVCNVKANVVTW------TSVIKGCNVQGRGDD-SL 419
Query: 323 EY----HFSEIFCQIAT 335
EY FS++ T
Sbjct: 420 EYFRQMQFSKVLANSVT 436
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 90/205 (43%), Gaps = 10/205 (4%)
Query: 30 ALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRSMIS 89
+L+ QM +++ ++ TI IL C E NL R I+ + ++ N ++++
Sbjct: 418 SLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVN 477
Query: 90 LNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKP 149
+ K + + +++ +L+ +N+I+ GY + AL + M + P
Sbjct: 478 MYAKCGLLSEGSLVFEAIRDKDLIS----WNSIIKGYGMHGFAEKALSMFDRMISSGFHP 533
Query: 150 DSQTFSYLIHNCSNEEDIIK----YYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQV 205
D ++ CS+ + K +Y K G + + + +++ G ++A ++
Sbjct: 534 DGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEI 593
Query: 206 VLDAEIPVKSRSEVKSALVSALASH 230
V +P++ + V AL+++ H
Sbjct: 594 V--KNMPMEPKVCVLGALLNSCRMH 616
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 41/250 (16%), Positives = 97/250 (38%), Gaps = 16/250 (6%)
Query: 6 EITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLV 65
E P ++ +++ K L M S E + C E ++
Sbjct: 254 EFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIA 313
Query: 66 RRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAG 125
+++ + + + ++I + K A L ++ + +N+++
Sbjct: 314 EKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGI----ESWNSLITS 369
Query: 126 YFRKKDVQGALMVLKEMEQ----ANVKPDSQTFSYLIHNCSNE---EDIIKYYEQLKSAG 178
+ + AL + E+E+ NVK + T++ +I C+ + +D ++Y+ Q++ +
Sbjct: 370 FVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSK 429
Query: 179 GQITKYVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSE---VKSALVSALASHGRTSD 235
+++ R++ + S SE V++ALV+ A G S+
Sbjct: 430 VLANSVTICCILSICAELPALNLGREI--HGHVIRTSMSENILVQNALVNMYAKCGLLSE 487
Query: 236 AIIVYEEIKE 245
+V+E I++
Sbjct: 488 GSLVFEAIRD 497
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 112/242 (46%), Gaps = 13/242 (5%)
Query: 9 PSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRI 68
P ++ LI LK+ AL++++ M+ + P T NS+L+ ++ +F V
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518
Query: 69 YPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFR 128
Y + PN TF ++ + + D A LL+++K ++ P A + ++ G+ +
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCK 578
Query: 129 KKDVQGALMVLKEMEQA-NVKPDSQTFSYLIHNCSNEEDII---KYYEQLKSAGGQITKY 184
D+ GA + ++ME+A V + T++ +IH + + ++ K ++++ Y
Sbjct: 579 NGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGY 638
Query: 185 VFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIK 244
+ +++ + G + +L+ +++ + +L + GR + + V + +
Sbjct: 639 TYRLMVDGFCKTGNVNLGYKFLLEM---------MENGFIPSLTTLGRVINCLCVEDRVY 689
Query: 245 EA 246
EA
Sbjct: 690 EA 691
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 137/319 (42%), Gaps = 16/319 (5%)
Query: 9 PSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRI 68
P +Y LI C K A + +MV L P + T N+++ + L RI
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343
Query: 69 YPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFR 128
+ P+ T+RS+I + + A +L ++ + P +YN ++ G
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Query: 129 KKDVQGALMVLKEMEQANVKPDSQTFSYLIH-----NCSNEEDIIKYYEQLKSAGGQITK 183
+ + A + EM + + P+ QTF+ L++ C ++ D + + + S G
Sbjct: 404 QGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL--VKVMISKGYFPDI 461
Query: 184 YVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVKS--ALVSALASHGRTSDAIIVYE 241
+ F LI+ Y+T + E A + +LD + +V + +L++ L + D + Y+
Sbjct: 462 FTFNILIHGYSTQLKMENALE-ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYK 520
Query: 242 EIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVH----DPDYWMDGCCRLILHCVR 297
+ E GC L+E L +L+ + LLEE+ +PD G LI +
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFG--TLIDGFCK 578
Query: 298 FKQLSSATDLLKQLKDKFK 316
L A L +++++ +K
Sbjct: 579 NGDLDGAYTLFRKMEEAYK 597
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/452 (19%), Positives = 175/452 (38%), Gaps = 46/452 (10%)
Query: 12 ASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPM 71
+++ KL+ C V +++++++ ++P+ T N + + E + R+
Sbjct: 217 STFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGC 276
Query: 72 ICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKD 131
+ KP+ T+ ++I K F A L + L P + YN ++AGY +
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 132 VQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKYYEQLKSAGGQITK---YVFMA 188
VQ A ++ + PD T+ LI +E + + A G+ K ++
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 189 LINAYTTCGEFEKARQVVLD-AEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAG 247
LI + G +A Q+ + +E + + + LV+ L G SDA + + + G
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 248 CNLEPRAVIALIE----HLNSEGELNRLIQLLEEVHDPDYW-----MDGCCR-------- 290
+ LI L E L L +L+ DPD + ++G C+
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 291 --------------------LILHCVRFKQLSSATDLLKQLKDKFKDDEMAMEYHFSEIF 330
L+ R+++L A LL+++K+K + + + F
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Query: 331 CQIATTDPPDVQIGLDLLQFIKDELGLPPSRKCLDFLLGACVNARDLKRAHLIWKEYENA 390
C+ D+ L + +++ + S + ++ A ++ A +++E +
Sbjct: 577 CKNG-----DLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Query: 391 GLPYNVLSYLWMYKAFLASGNRKSASKLLSKM 422
L + +Y M F +GN K L +M
Sbjct: 632 CLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEM 663
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 1/160 (0%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
+ P ++ L+ C + V A +V+ M+ P T N ++H +
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 67 RIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGY 126
I ++ + + P+ T+ S+++ K F+ + E P +N ++
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Query: 127 FRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN-CSNEE 165
R + + AL +L+EM+ +V PD+ TF LI C N +
Sbjct: 542 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 63/146 (43%), Gaps = 1/146 (0%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQG-ELVPSTETINSILHACEESYEFNLV 65
+ P + ++ LI C + A + +M + ++ ST T N I+HA E +
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMA 621
Query: 66 RRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAG 125
+++ + L P+ T+R M+ K + + Y L ++ E +P+ + ++
Sbjct: 622 EKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINC 681
Query: 126 YFRKKDVQGALMVLKEMEQANVKPDS 151
+ V A ++ M Q + P++
Sbjct: 682 LCVEDRVYEAAGIIHRMVQKGLVPEA 707
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 97/512 (18%), Positives = 185/512 (36%), Gaps = 125/512 (24%)
Query: 26 KVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFR 85
KV A++V E+M + P+ + N+I+ +S F+ ++Y + + P+ +F
Sbjct: 91 KVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFT 150
Query: 86 SMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYF------------------ 127
+ K +A LL+++ Y ++ G++
Sbjct: 151 IRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLAS 210
Query: 128 -----------------RKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN-CSNEE---- 165
+K DV+ +L ++ + V P+ T++ I C E
Sbjct: 211 GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Query: 166 --------------DIIKYYE-------------------QLKSAGGQITKYVFMALINA 192
D+I Y ++ + G + Y + LI
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330
Query: 193 YTTCGEFEKARQVVLDAEIP--VKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNL 250
Y G + A ++V DA V + +S L+ L G T+ A+ ++ E G +
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRS-LIDGLCHEGETNRALALFNE--ALGKGI 387
Query: 251 EPRAVI--ALIEHLNSEGELNRLIQ---------LLEEVHDPDYWMDGCCRLILHCVRFK 299
+P ++ LI+ L+++G + Q L+ EV + ++G C+ + CV
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK--MGCV--- 442
Query: 300 QLSSATDLLKQL--KDKFKD------------DEMAMEYHFSEIFCQIATTDPPDVQI-- 343
S A L+K + K F D ++ ME + + PDV
Sbjct: 443 --SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYN 500
Query: 344 ----GL-------DLLQFIKD--ELGLPPSRKCLDFLLGACVNARDLKRAHLIWKEYENA 390
GL D+++ K E G P+ + LL + R L A + +E +N
Sbjct: 501 SLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK 560
Query: 391 GLPYNVLSYLWMYKAFLASGNRKSASKLLSKM 422
+ + +++ + F +G+ A L KM
Sbjct: 561 SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
>sp|O23491|PP315_ARATH Pentatricopeptide repeat-containing protein At4g16470
OS=Arabidopsis thaliana GN=PCMP-E12 PE=2 SV=2
Length = 501
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 20/232 (8%)
Query: 47 ETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDD 106
ET +L C++ E+ +RI+ + N ++ L D +A L
Sbjct: 109 ETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRS 168
Query: 107 LKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEED 166
LK +L+P +NA+++GY +K Q L + +M Q + PD TF+ + CS +
Sbjct: 169 LKIRDLIP----WNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDR 224
Query: 167 IIKYYEQLKSAGGQITK-------YVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEV 219
+ E K A + K V AL++ Y C F +V + +R+ +
Sbjct: 225 L----EHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQ----LSTRNVI 276
Query: 220 K-SALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHLNSEGELNR 270
++L+S HG+ S+ + +E++KE GC P + ++ N G +++
Sbjct: 277 TWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDK 328
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 86/206 (41%), Gaps = 10/206 (4%)
Query: 30 ALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRSMIS 89
L + M Q +VP T S+ AC +R + ++ +K N +++
Sbjct: 193 GLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVD 252
Query: 90 LNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKP 149
+ K F + + D L N++ + ++++GY V L ++M++ +P
Sbjct: 253 MYFKCSSFSDGHRVFDQLSTRNVIT----WTSLISGYGYHGKVSEVLKCFEKMKEEGCRP 308
Query: 150 DSQTFSYLIHNCSNEEDIIKYYEQLKSA----GGQITKYVFMALINAYTTCGEFEKARQV 205
+ TF ++ C++ + K +E S G + + A+++ G ++A +
Sbjct: 309 NPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEF 368
Query: 206 VLDAEIPVKSRSEVKSALVSALASHG 231
V+ + P K V +L+ A HG
Sbjct: 369 VMKS--PCKEHPPVWGSLLGACRIHG 392
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 115/253 (45%), Gaps = 12/253 (4%)
Query: 4 KLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHAC----EES 59
KL P+ + L+ C ++ A+ +V+QM P+T T N+++H + S
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 60 YEFNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMY 119
L+ R+ C +P+ T+ +++ K D D A++LL+ +++ L P +Y
Sbjct: 204 EAMALIDRMVAKGC----QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259
Query: 120 NAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIH---NCSNEEDIIKYYEQLKS 176
N I+ G + K + AL + KEME ++P+ T+S LI N D + +
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 177 AGGQITKYVFMALINAYTTCGEFEKARQVVLD-AEIPVKSRSEVKSALVSALASHGRTSD 235
+ F ALI+A+ G+ +A ++ + + + S+L++ H R +
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 236 AIIVYEEIKEAGC 248
A ++E + C
Sbjct: 380 AKQMFEFMVSKHC 392
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/417 (20%), Positives = 169/417 (40%), Gaps = 47/417 (11%)
Query: 5 LEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNL 64
L I + +Y LI C ++ +AL V+ +M++ P+ T++S+L+ S +
Sbjct: 110 LGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 169
Query: 65 VRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMA 124
+ + +PN+ TF ++I A +L+D + P Y ++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 125 GYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNC---SNEEDIIKYYEQLKSAGGQI 181
G ++ D A +L +MEQ ++P ++ +I + +D + ++++++ G +
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 182 TKYVFMALINAYTTCGEFEKARQVVLDA-EIPVKSRSEVKSALVSALASHGRTSDAIIVY 240
+ +LI+ G + A +++ D E + SAL+ A G+ +A +Y
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 241 EEIKEAGCNLEPRAVI--ALIEHLNSEGELNRLIQLLEEVHDPDYWMDGCCRLILHCVRF 298
+E+ + +++P V +LI L+ Q+ E + HC F
Sbjct: 350 DEMVKR--SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK------------HC--F 393
Query: 299 KQLSSATDLLKQLKDKFKDDEMAMEYHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGLP 358
+ + L+K K+K E ME F E+ + GL
Sbjct: 394 PDVVTYNTLIKGFC-KYKRVEEGMEV-FREM-----------------------SQRGLV 428
Query: 359 PSRKCLDFLLGACVNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSA 415
+ + L+ A D A I+KE + G+P N+++Y + +G + A
Sbjct: 429 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 120/285 (42%), Gaps = 4/285 (1%)
Query: 6 EITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLV 65
+I P ++ LI K+ A + ++MV+ + PS T +S+++ +
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 66 RRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAG 125
++++ + + P+ T+ ++I K K + + ++ + L+ YN ++ G
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 126 YFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN-CSNE--EDIIKYYEQLKSAGGQIT 182
F+ D A + KEM V P+ T++ L+ C N E + +E L+ + + T
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 183 KYVFMALINAYTTCGEFEKARQVVLDAEI-PVKSRSEVKSALVSALASHGRTSDAIIVYE 241
Y + +I G+ E + + + VK + ++S G +A +++
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 242 EIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVHDPDYWMD 286
E+KE G LI +G+ +L++E+ + D
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 72/156 (46%), Gaps = 6/156 (3%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
+ P+ +Y L+ C K+ A+ V E + + ++ P+ T N ++ ++ + V
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK---VE 518
Query: 67 RIYPMICHHNLK---PNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIM 123
+ + C+ +LK P+ + +MIS + + A +L ++KE +P + YN ++
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 124 AGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIH 159
R D + + ++KEM D+ T + +
Sbjct: 579 RARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 92/434 (21%), Positives = 178/434 (41%), Gaps = 73/434 (16%)
Query: 8 TPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRR 67
+P+S ++ LI + ++ AL+ ++M L PS +++I+ + + +
Sbjct: 371 SPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALK 430
Query: 68 IYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYF 127
++ L N +++S K D A LL ++ + P YN +M G+
Sbjct: 431 LFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHC 489
Query: 128 RKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNC---SNEEDIIKYYEQLKSAGGQITKY 184
R+K++ A +V + + +KP++ T+S LI C +E++ ++ + S+ ++
Sbjct: 490 RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV 549
Query: 185 VFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVK----SALVSALASHGRTSDAIIVY 240
V+ +IN G+ KAR+++ A + + R V ++++ G A+ Y
Sbjct: 550 VYQTIINGLCKVGQTSKARELL--ANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAY 607
Query: 241 EEIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLE----------EVHDPDYW--MDGC 288
EE+ G + P VI +N + NR+ Q LE ++ P Y +DG
Sbjct: 608 EEM--CGNGISPN-VITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGF 664
Query: 289 CRLILHCVRFKQLSSATDLLKQLKDKFKDDEMAMEYHFSEIFCQIATTDPPDVQIGLDLL 348
C+ + SA+ L FSE+
Sbjct: 665 CKR-------SNMESASAL------------------FSELL------------------ 681
Query: 349 QFIKDELGLPPSRKCLDFLLGACVNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLA 408
E GL PS+ + L+ N ++ A ++K+ GL ++ +Y + L
Sbjct: 682 -----EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLK 736
Query: 409 SGNRKSASKLLSKM 422
GN AS+L ++M
Sbjct: 737 DGNLILASELYTEM 750
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 129/287 (44%), Gaps = 9/287 (3%)
Query: 14 YKKLITYSCDLLKVHVALDVVEQMVQGE-LVPSTETINSILHACEESYEFNLVRRIYPMI 72
Y+ +I C + + A +++ M++ + L S + NSI+ + E + Y +
Sbjct: 551 YQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 73 CHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDV 132
C + + PN T+ S+++ K D A + D++K + Y A++ G+ ++ ++
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 133 QGALMVLKEMEQANVKPDSQTFSYLI---HNCSNEEDIIKYYEQLKSAGGQITKYVFMAL 189
+ A + E+ + + P ++ LI N N + Y+++ G + + L
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 730
Query: 190 INAYTTCGEFEKARQVVLDAE-IPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGC 248
I+ G A ++ + + + + + + +V+ L+ G+ + ++EE+K+
Sbjct: 731 IDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKN-- 788
Query: 249 NLEPRAVI--ALIEHLNSEGELNRLIQLLEEVHDPDYWMDGCCRLIL 293
N+ P +I A+I EG L+ +L +E+ D DG IL
Sbjct: 789 NVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL 835
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 72/152 (47%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
+ PS Y LI+ +L + ALD+ ++M++ L T +++ + L
Sbjct: 685 LNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILAS 744
Query: 67 RIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGY 126
+Y + L P+ + +++ K F + +++K+ N+ P +YNA++AG+
Sbjct: 745 ELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 804
Query: 127 FRKKDVQGALMVLKEMEQANVKPDSQTFSYLI 158
+R+ ++ A + EM + PD TF L+
Sbjct: 805 YREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 128/276 (46%), Gaps = 17/276 (6%)
Query: 30 ALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNL-KPNSETFRSMI 88
AL+V+ + ++ P + + + AC ++ + + + + L P+ ET+ S+I
Sbjct: 252 ALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVI 311
Query: 89 SLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVK 148
+VK + D A L D++ + +++ G+ + D+ AL++ +ME+
Sbjct: 312 LASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS 371
Query: 149 PDSQTFSYLI---HNCSNEEDIIKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQV 205
P+S TFS LI E +++Y++++ G + + +I + + E+A ++
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431
Query: 206 VLDAEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVI---ALIEHL 262
++ + V + ++S L G+T +A + +++ G + P V ++ H
Sbjct: 432 FDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRG--IGPNVVSYNNVMLGHC 489
Query: 263 NSEG-ELNRLI--QLLEEVHDPDYW-----MDGCCR 290
+ +L R++ +LE+ P+ + +DGC R
Sbjct: 490 RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFR 525
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 76/415 (18%), Positives = 164/415 (39%), Gaps = 19/415 (4%)
Query: 17 LITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHN 76
L YS D H A+D+V QM++ +++P +N L A + + +Y +
Sbjct: 170 LNAYSKDRQTDH-AVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIG 228
Query: 77 LKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGAL 136
+ ++ T + ++ +++ + A +L E P + +Y+ + + D+ A
Sbjct: 229 VDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMAN 288
Query: 137 MVLKEMEQANV-KPDSQTFSYLIHNC---SNEEDIIKYYEQLKSAGGQITKYVFMALINA 192
+L+EM++ + P +T++ +I N +D I+ +++ S G + +LI
Sbjct: 289 SLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITG 348
Query: 193 YTTCGEFEKARQVVLDAEIPVKSRSEVK-SALVSALASHGRTSDAIIVYEEIKEAGCNLE 251
+ + A + E S + V S L+ +G A+ Y++++ G
Sbjct: 349 HCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPS 408
Query: 252 PRAVIALIEHLNSEGELNRLIQLLEEVHDPDYWMDGCCRLILHCV-RFKQLSSATDLLKQ 310
V +I+ + ++L +E + C IL + + + AT+LL +
Sbjct: 409 VFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSK 468
Query: 311 LKDKFKDDEMAMEYHFSEIFCQIATTDPPDVQIGLDLLQFIKD---ELGLPPSRKCLDFL 367
++ + + + C+ Q +DL + + E GL P+ L
Sbjct: 469 MESRGIGPNVVSYNNVMLGHCR---------QKNMDLARIVFSNILEKGLKPNNYTYSIL 519
Query: 368 LGACVNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLLSKM 422
+ C D + A + ++ + N + Y + G A +LL+ M
Sbjct: 520 IDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM 574
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/97 (18%), Positives = 51/97 (52%)
Query: 29 VALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRSMI 88
+A ++ +M LVP I++ + +F V +++ + +N+ PN + ++I
Sbjct: 742 LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 801
Query: 89 SLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAG 125
+ + + + D A+ L D++ + ++P + ++ +++G
Sbjct: 802 AGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 165/394 (41%), Gaps = 24/394 (6%)
Query: 8 TPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRR 67
+P++ +Y LI+ C +V A ++ + ++P T NS++ + +
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421
Query: 68 IYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYF 127
++ + +P+ T+ +I D A ++L ++ + YN ++ G+
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481
Query: 128 RKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN-CSNE--EDIIKYYEQLKSAGGQITKY 184
+ + A + EME V +S T++ LI C + ED + +Q+ G + KY
Sbjct: 482 KANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKY 541
Query: 185 VFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVKS--ALVSALASHGRTSDAIIVYEE 242
+ +L+ + G+ +KA +V A ++ + L+S L GR A +
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIV-QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600
Query: 243 IKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVHD-----PDYWMDGCCRLILH--C 295
I+ G NL P A +I+ L + + I L E+ + PD R++ C
Sbjct: 601 IQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAV---SYRIVFRGLC 657
Query: 296 VRFKQLSSATDLLKQLKDKFKDDEMAMEYHFSEIFCQIATTDP--PDVQIGLDLLQFIKD 353
+ A D L +L +K E + Y +E ++ + V + + +F ++
Sbjct: 658 NGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEE 717
Query: 354 EL----GLPPSRKCLDFL--LGACVNARDLKRAH 381
E+ GL RK D L LG +++R +R +
Sbjct: 718 EVSMVKGLLKIRKFQDALATLGGVLDSRQPRRTY 751
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/401 (19%), Positives = 163/401 (40%), Gaps = 16/401 (3%)
Query: 31 LDVVEQMV-QGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRSMIS 89
L VV+ M+ + L P T N +L+ + LV + + +KP+ TF +I
Sbjct: 138 LSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIK 197
Query: 90 LNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKP 149
+ A +L+D+ L+P + +M GY + D+ GAL + ++M +
Sbjct: 198 ALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSW 257
Query: 150 DSQTFSYLIHNCSNE---EDIIKYYEQLKSAGGQIT-KYVFMALINAYTTCGEFEKARQV 205
+ + + ++H E ED + + +++ + G +Y F L+N G + A +
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE- 316
Query: 206 VLDAEIPVKSRSEVKS--ALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHLN 263
++D + +V + +++S L G +A+ V +++ C+ LI L
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC 376
Query: 264 SEGELNRLIQLLEEVHDPDYWMDGCC--RLILHCVRFKQLSSATDLLKQLKDKFKDDEMA 321
E ++ +L + D C LI + A +L ++++ K + +
Sbjct: 377 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436
Query: 322 MEYHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGLPPSRKCLDFLLGACVNARDLKRAH 381
+ C D L++L+ ++ G S + L+ A + A
Sbjct: 437 TYNMLIDSLCSKGKLDE-----ALNMLKQMELS-GCARSVITYNTLIDGFCKANKTREAE 490
Query: 382 LIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLLSKM 422
I+ E E G+ N ++Y + S + A++L+ +M
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 139/314 (44%), Gaps = 10/314 (3%)
Query: 9 PSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRI 68
P ++ L+ C V A+++++ M+Q P T NS++ + E +
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 69 YPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFR 128
+ + PN+ T+ ++IS K + A L L ++P +N+++ G
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 129 KKDVQGALMVLKEMEQANVKPDSQTFSYLIHN-CSNE--EDIIKYYEQLKSAGGQITKYV 185
++ + A+ + +EM +PD T++ LI + CS ++ + +Q++ +G +
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 186 FMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVK-SALVSALASHGRTSDAIIVYEEIK 244
+ LI+ + + +A ++ + E+ SR+ V + L+ L R DA + +++
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 245 EAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVH----DPDYWMDGCCRLILHCVRFKQ 300
G + +L+ H G++ + +++ + +PD G LI + +
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT--LISGLCKAGR 590
Query: 301 LSSATDLLKQLKDK 314
+ A+ LL+ ++ K
Sbjct: 591 VEVASKLLRSIQMK 604
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 110/227 (48%), Gaps = 14/227 (6%)
Query: 36 QMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRSMISLNVKIK 95
++++ ++P T S+L AC + R+++ + L N ++I++ + +
Sbjct: 119 EILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECE 178
Query: 96 DFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFS 155
D DSA + D + E P YNA++ GY R+ AL + +EM+ +KP+ T
Sbjct: 179 DVDSARCVFDRIVE----PCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLL 234
Query: 156 YLIHNCS--NEEDIIKYYEQLKSAGGQITKYVFM--ALINAYTTCGEFEKARQVVLDAEI 211
++ +C+ D+ K+ + + KYV + ALI+ + CG + A + E
Sbjct: 235 SVLSSCALLGSLDLGKWIHKY-AKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIF---EK 290
Query: 212 PVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIAL 258
++ SA++ A A+HG+ +++++E ++ N++P + L
Sbjct: 291 MRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSE--NVQPDEITFL 335
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 108/243 (44%), Gaps = 10/243 (4%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
+ P Y +IT + + AL + +M L P+ T+ S+L +C +L +
Sbjct: 191 VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGK 250
Query: 67 RIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGY 126
I+ H+ + ++I + K D A S+ + ++ + ++A++ Y
Sbjct: 251 WIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKD----TQAWSAMIVAY 306
Query: 127 FRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNE---EDIIKYYEQLKSAGGQITK 183
+ ++++ + M NV+PD TF L++ CS+ E+ KY+ Q+ S G +
Sbjct: 307 ANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPS 366
Query: 184 YV-FMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVKSALVSALASHGRTSDAIIVYEE 242
+ ++++ + G E A + + ++P+ + L++A +SH A V E
Sbjct: 367 IKHYGSMVDLLSRAGNLEDAYEFI--DKLPISPTPMLWRILLAACSSHNNLDLAEKVSER 424
Query: 243 IKE 245
I E
Sbjct: 425 IFE 427
Score = 40.0 bits (92), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 151/374 (40%), Gaps = 37/374 (9%)
Query: 98 DSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYL 157
+S+ S L E P ++N++ GY R + + E+ + + PD+ TF L
Sbjct: 76 ESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSL 135
Query: 158 IHNCSNEEDIIKYYEQLKS-------AGGQITKYVFMALINAYTTCGEFEKARQVVLDAE 210
+ C+ + K E+ + G YV LIN YT C + + AR V +
Sbjct: 136 LKACA----VAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVF---D 188
Query: 211 IPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHLNSEG---- 266
V+ +A+++ A R ++A+ ++ E++ G L+P I L+ L+S
Sbjct: 189 RIVEPCVVCYNAMITGYARRNRPNEALSLFREMQ--GKYLKPNE-ITLLSVLSSCALLGS 245
Query: 267 -ELNRLIQLLEEVHDPDYWMDGCCRLILHCVRFKQLSSATDLLKQLKDKFKDDEMAMEYH 325
+L + I + H ++ LI + L A + ++++ K AM
Sbjct: 246 LDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAM--- 302
Query: 326 FSEIFCQIATTDPPDVQIGLDLLQFIKDELGLPPSRKCLDFLLGACVNARDLKRAHLIWK 385
+A + + + + + ++ E + P LL AC + ++ +
Sbjct: 303 ------IVAYANHGKAEKSMLMFERMRSE-NVQPDEITFLGLLNACSHTGRVEEGRKYFS 355
Query: 386 E-YENAGLPYNVLSYLWMYKAFLASGNRKSASKLLSKMP-KDDPHV-RFVIQACKQTYTI 442
+ G+ ++ Y M +GN + A + + K+P P + R ++ AC +
Sbjct: 356 QMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNL 415
Query: 443 PSLQK--ERGFEKD 454
+K ER FE D
Sbjct: 416 DLAEKVSERIFELD 429
>sp|O82178|PP186_ARATH Pentatricopeptide repeat-containing protein At2g35130
OS=Arabidopsis thaliana GN=At2g35130 PE=2 SV=1
Length = 591
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 120/261 (45%), Gaps = 4/261 (1%)
Query: 30 ALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRSMIS 89
A+DV ++M + P+TET N +++ ++ + + ++Y + H KPN T+ ++++
Sbjct: 248 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 307
Query: 90 LNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKP 149
+ + A + + L+E L P +YNA+M Y R GA + M+ +P
Sbjct: 308 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 367
Query: 150 DSQTFSYLI---HNCSNEEDIIKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVV 206
D +++ ++ D +E++K G T M L++AY+ + K +V
Sbjct: 368 DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIV 427
Query: 207 LD-AEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHLNSE 265
+ +E V+ + V +++++ G+ + + E++ C + LI
Sbjct: 428 KEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKA 487
Query: 266 GELNRLIQLLEEVHDPDYWMD 286
G L R+ +L E+ + ++ D
Sbjct: 488 GFLERIEELFVELKEKNFRPD 508
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%)
Query: 4 KLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFN 63
+L I P+ S+ L++ V +V++M + + P T +NS+L+ +F
Sbjct: 397 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFT 456
Query: 64 LVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIM 123
+ +I + + + T+ +I++ K + L +LKE N P + + +
Sbjct: 457 KMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRI 516
Query: 124 AGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDI 167
Y RKK L V +EM + PD T L+ CS+EE +
Sbjct: 517 GAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQV 560
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/277 (16%), Positives = 119/277 (42%), Gaps = 8/277 (2%)
Query: 9 PSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRI 68
P+ +Y L+ A ++ EQ+ + L P N+++ + + I
Sbjct: 297 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 356
Query: 69 YPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFR 128
+ ++ H +P+ ++ M+ + A ++ +++K + + PT + +++ Y +
Sbjct: 357 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 416
Query: 129 KKDVQGALMVLKEMEQANVKPDSQTFSYLIH---NCSNEEDIIKYYEQLKSAGGQITKYV 185
+DV ++KEM + V+PD+ + +++ + K ++++
Sbjct: 417 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIST 476
Query: 186 FMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVKSALVSALASHGRTS---DAIIVYEE 242
+ LIN Y G E+ ++ + E+ K+ S + ++ R + V+EE
Sbjct: 477 YNILINIYGKAGFLERIEELFV--ELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEE 534
Query: 243 IKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVH 279
+ ++GC + L+ +SE ++ ++ +L +H
Sbjct: 535 MIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMH 571
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 90/209 (43%), Gaps = 28/209 (13%)
Query: 76 NLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGA 135
+ +P+ F +I + + A SL L E +PT Y ++ Y ++ A
Sbjct: 150 SFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERA 209
Query: 136 LMVLKEMEQANVKPDSQTFSYLIHNC---------SNEEDIIKYYEQLKSAGGQITKYVF 186
+VL EM+ +V P +T ++N N E+ I ++++K + T +
Sbjct: 210 EVVLVEMQNHHVSP--KTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 267
Query: 187 MALINAYTTCGEFEKARQVVLDAEIPVKSRSE-------VKSALVSALASHGRTSDAIIV 239
+IN Y KA + + ++ + RS +ALV+A A G A +
Sbjct: 268 NLMINLYG------KASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 321
Query: 240 YEEIKEAGCNLEPRAVI--ALIEHLNSEG 266
+E+++E G LEP + AL+E + G
Sbjct: 322 FEQLQEDG--LEPDVYVYNALMESYSRAG 348
>sp|Q0WLC6|PP349_ARATH Pentatricopeptide repeat-containing protein At4g34830,
chloroplastic OS=Arabidopsis thaliana
GN=At4g34830/At4g34820 PE=2 SV=2
Length = 1089
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 129/280 (46%), Gaps = 20/280 (7%)
Query: 112 LMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKYY 171
L PT S +N +M+ +D++GA VL+ ++++ + D + ++ LI +C+ + +
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 172 E---QLKSAGGQITKYVFMALINAYTTCGEFEKARQV--VLDAEIPVKSRSEVKSALVSA 226
E Q+ ++G + + F ALI+ G+ KA +L ++ VK V +AL+SA
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSK-NVKPDRVVFNALISA 581
Query: 227 LASHGRTSDAIIVYEEIKEAGCNLEPR--AVIALIEHLNSEGELNRLIQLLEEVHDPDYW 284
G A V E+K ++P ++ AL++ + G++ R ++ + +H Y
Sbjct: 582 CGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHK--YG 639
Query: 285 MDGCCRL----ILHCVRFKQLSSATDLLKQLKDKFKDDEMAMEYHFSEIFCQIATTDPPD 340
+ G + + C + A + K +K+K D E FS + D
Sbjct: 640 IRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEK---DVTPDEVFFSALIDVAGHAKMLD 696
Query: 341 VQIGLDLLQFIKDELGLPPSRKCLDFLLGACVNARDLKRA 380
G+ LQ K + G+ L+GAC NA+D K+A
Sbjct: 697 EAFGI--LQDAKSQ-GIRLGTISYSSLMGACCNAKDWKKA 733
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 94/202 (46%), Gaps = 7/202 (3%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGE---LVPSTETINSILHACEESYEFN 63
+ P + LI+ V A DV+ +M + E + P +I +++ AC + +
Sbjct: 568 VKPDRVVFNALISACGQSGAVDRAFDVLAEM-KAETHPIDPDHISIGALMKACCNAGQVE 626
Query: 64 LVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIM 123
+ +Y MI + ++ E + ++ K D+D A S+ D+KE ++ P ++A++
Sbjct: 627 RAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALI 686
Query: 124 AGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEED---IIKYYEQLKSAGGQ 180
K + A +L++ + ++ + ++S L+ C N +D ++ YE++KS +
Sbjct: 687 DVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLR 746
Query: 181 ITKYVFMALINAYTTCGEFEKA 202
T ALI A + KA
Sbjct: 747 PTISTMNALITALCEGNQLPKA 768
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/418 (19%), Positives = 156/418 (37%), Gaps = 51/418 (12%)
Query: 42 LVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAY 101
L P+ T N ++ C S + R + ++ + + + + ++IS K D+ +
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 102 SLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNC 161
+ + + + A++ G R V A + NVKPD F+ LI C
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 162 SNEEDIIKYYEQLKSAGGQI-----TKYVFMALINAYTTCGEFEKARQVV-LDAEIPVKS 215
+ + ++ L + AL+ A G+ E+A++V + + ++
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 216 RSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLL 275
EV + V++ + G A +Y+++KE + ALI+ L+ +L
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGIL 702
Query: 276 EEVHDPDYWMDGCCRLILHCVRFKQLSSATDLLKQLKDKFKDDEMAMEYHFSEIFCQIAT 335
++ +R +S +S + A
Sbjct: 703 QDAKS-------------QGIRLGTIS-----------------------YSSLMG--AC 724
Query: 336 TDPPDVQIGLDLLQFIKDELGLPPSRKCLDFLLGACVNARDLKRAHLIWKEYENAGLPYN 395
+ D + L+L + IK + L P+ ++ L+ A L +A E + GL N
Sbjct: 725 CNAKDWKKALELYEKIK-SIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPN 783
Query: 396 VLSYLWMYKAFLASGNRKSASKLLSKMPKDDPHVRFVIQACKQTYTIPSLQKERGFEK 453
++Y + A + + + KLLS+ D ++ C I SL K R FEK
Sbjct: 784 TITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRC-----ITSLCKRR-FEK 835
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/281 (17%), Positives = 124/281 (44%), Gaps = 6/281 (2%)
Query: 4 KLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFN 63
KL + P+ +++ L++ + A V+ + + + + +++ +C +S + +
Sbjct: 460 KLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVD 519
Query: 64 LVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIM 123
+ ++ + + ++ N TF ++I + A+ L+ N+ P ++NA++
Sbjct: 520 AMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALI 579
Query: 124 AGYFRKKDVQGALMVLKEM--EQANVKPDSQTFSYLIHNCSNEEDIIK---YYEQLKSAG 178
+ + V A VL EM E + PD + L+ C N + + Y+ + G
Sbjct: 580 SACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYG 639
Query: 179 GQITKYVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVKSALVSALASHGRTSD-AI 237
+ T V+ +N+ + G+++ A + D + + EV + + +A H + D A
Sbjct: 640 IRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAF 699
Query: 238 IVYEEIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEV 278
+ ++ K G L + +L+ + + + ++L E++
Sbjct: 700 GILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKI 740
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 113/271 (41%), Gaps = 6/271 (2%)
Query: 14 YKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMIC 73
Y LI+ KV +V QM + + T +++ C + + Y ++
Sbjct: 505 YTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILR 564
Query: 74 HHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMN--LMPTASMYNAIMAGYFRKKD 131
N+KP+ F ++IS + D A+ +L ++K + P A+M
Sbjct: 565 SKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQ 624
Query: 132 VQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEED---IIKYYEQLKSAGGQITKYVFMA 188
V+ A V + + + ++ + ++ +++CS D Y+ +K + F A
Sbjct: 625 VERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSA 684
Query: 189 LINAYTTCGEFEKARQVVLDAEI-PVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAG 247
LI+ ++A ++ DA+ ++ + S+L+ A + A+ +YE+IK
Sbjct: 685 LIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIK 744
Query: 248 CNLEPRAVIALIEHLNSEGELNRLIQLLEEV 278
+ ALI L +L + ++ L+E+
Sbjct: 745 LRPTISTMNALITALCEGNQLPKAMEYLDEI 775
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 62/145 (42%)
Query: 6 EITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLV 65
++TP + LI + + A +++ + T + +S++ AC + ++
Sbjct: 674 DVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKA 733
Query: 66 RRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAG 125
+Y I L+P T ++I+ + A LD++K + L P Y+ +M
Sbjct: 734 LELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLA 793
Query: 126 YFRKKDVQGALMVLKEMEQANVKPD 150
RK D + + +L + + V P+
Sbjct: 794 SERKDDFEVSFKLLSQAKGDGVSPN 818
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 51/112 (45%)
Query: 13 SYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMI 72
SY L+ C+ AL++ E++ +L P+ T+N+++ A E + I
Sbjct: 716 SYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEI 775
Query: 73 CHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMA 124
LKPN+ T+ ++ + + DF+ ++ LL K + P M I +
Sbjct: 776 KTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITS 827
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 112/252 (44%), Gaps = 5/252 (1%)
Query: 2 HAKLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYE 61
H + + + ++ LI C + K AL+++ M P T N+++ +S E
Sbjct: 197 HLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNE 256
Query: 62 FNLVRRIYPMICHHNL-KPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYN 120
N ++ + ++ P+ T+ SMIS K A SLLDD+ + + PT +N
Sbjct: 257 LNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFN 316
Query: 121 AIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDI---IKYYEQLKSA 177
++ GY + ++ A + +M PD TF+ LI + + +E++ +
Sbjct: 317 VLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR 376
Query: 178 GGQITKYVFMALINAYTTCGEFEKARQVVLD-AEIPVKSRSEVKSALVSALASHGRTSDA 236
G + + LINA KAR+++ A + + + + ++ G+ ++A
Sbjct: 377 GMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Query: 237 IIVYEEIKEAGC 248
++ EE+++ C
Sbjct: 437 NVIVEEMEKKKC 448
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 72/155 (46%)
Query: 4 KLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFN 63
+L I P++ ++ L+ ++ A ++ +M+ P T S++ + +
Sbjct: 305 RLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVS 364
Query: 64 LVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIM 123
R++ + + PN+ T+ +I+ A LL L +++P MYN ++
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVI 424
Query: 124 AGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLI 158
G+ + V A ++++EME+ KPD TF+ LI
Sbjct: 425 DGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
>sp|Q9FGR7|PP426_ARATH Pentatricopeptide repeat-containing protein At5g50280,
chloroplastic OS=Arabidopsis thaliana GN=EMB1006 PE=2
SV=1
Length = 723
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 4/181 (2%)
Query: 4 KLEITPSSASYKKLI-TYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEF 62
K+ + PSS SY LI YS A E+M + + PS ET S+L A S +
Sbjct: 478 KVGLKPSSHSYTALIHAYSVSGWH-EKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDT 536
Query: 63 NLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAI 122
+ I+ ++ +K T+ +++ K + A ++ + +M L P+ YN +
Sbjct: 537 GKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNML 596
Query: 123 MAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIK--YYEQLKSAGGQ 180
M Y R +LKEM N+KPDS T+S +I+ D + +Y ++ GQ
Sbjct: 597 MNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQ 656
Query: 181 I 181
+
Sbjct: 657 V 657
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Query: 76 NLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGA 135
++ N+ + +++ K + L ++++ L P+A+ YN +M Y R+
Sbjct: 374 GIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIV 433
Query: 136 LMVLKEMEQANVKPDSQTFSYLIHNCSNEEDI----IKYYEQLKSAGGQITKYVFMALIN 191
+L+EME ++P+ ++++ LI + + + ++K G + + + + ALI+
Sbjct: 434 ETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIH 493
Query: 192 AYTTCGEFEKA 202
AY+ G EKA
Sbjct: 494 AYSVSGWHEKA 504
Score = 40.8 bits (94), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 103 LLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNC- 161
LL +L + +YNA ++G + A V + M++ NV PD+ T + LI
Sbjct: 260 LLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLR 319
Query: 162 ---SNEEDIIKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVVLDAEI---PVKS 215
+ +++ + +E++ G + ++ VF L+ ++ C E K +V+ E+ ++S
Sbjct: 320 KAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSF--CDEGLKEEALVIQTEMEKKGIRS 377
Query: 216 RSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAV 255
+ V + L+ A + ++ E+++ G L+P A
Sbjct: 378 NTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKG--LKPSAA 415
Score = 39.3 bits (90), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 47/257 (18%), Positives = 108/257 (42%), Gaps = 18/257 (7%)
Query: 30 ALDVVEQMVQGELVPSTET----INSILHACEESYEFNLVRRIYPMICHHNLKPNSETFR 85
A +V E M + + P T I ++ A + E V I+ + +K + + F
Sbjct: 292 AWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKE---VWEIFEKMSEKGVKWSQDVFG 348
Query: 86 SMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQA 145
++ + A + ++++ + +YN +M Y + ++ + EM
Sbjct: 349 GLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDK 408
Query: 146 NVKPDSQTFSYLIHNCSN--EEDIIK-YYEQLKSAGGQITKYVFMALINAYTTCGEFEKA 202
+KP + T++ L+ + + DI++ +++ G + + LI+AY G +K
Sbjct: 409 GLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAY---GRTKKM 465
Query: 203 RQVVLDA-----EIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIA 257
+ DA ++ +K S +AL+ A + G A +EE+ + G +
Sbjct: 466 SDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTS 525
Query: 258 LIEHLNSEGELNRLIQL 274
+++ G+ +L+++
Sbjct: 526 VLDAFRRSGDTGKLMEI 542
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 156/357 (43%), Gaps = 59/357 (16%)
Query: 8 TPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSIL-HACEESYEFNLVR 66
+P +Y +I C K A +V +M++ L P + T S+L AC++ +
Sbjct: 302 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG-DVVETE 360
Query: 67 RIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGY 126
+++ + ++ P+ F SM+SL + + D A + +KE L+P +Y ++ GY
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 127 FRKKDV------------QGALM-----------------------VLKEMEQANVKPDS 151
RK + QG M + EM + + PDS
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 152 QTFSYLIHN---CSNEEDIIKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKARQVVLD 208
T + LI N ++ ++ ++++K ++ + L++ + G+ + A+++ D
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 209 ---AEI---PVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVI--ALIE 260
EI P+ S LV+AL S G ++A V++E+ N++P +I ++I+
Sbjct: 541 MVSKEILPTPIS-----YSILVNALCSKGHLAEAFRVWDEMISK--NIKPTVMICNSMIK 593
Query: 261 HLNSEGELNRLIQLLEEVHDPDYWMDGCCR---LILHCVRFKQLSSATDLLKQLKDK 314
G + LE++ + D C LI VR + +S A L+K+++++
Sbjct: 594 GYCRSGNASDGESFLEKMISEGFVPD-CISYNTLIYGFVREENMSKAFGLVKKMEEE 649
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/403 (19%), Positives = 164/403 (40%), Gaps = 14/403 (3%)
Query: 27 VHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRS 86
V +A V +++ + + + T+N +++A + + V + + P+ T+ +
Sbjct: 216 VELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNT 275
Query: 87 MISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQAN 146
+IS + A+ L++ + P YN ++ G + + A V EM ++
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 147 VKPDSQTFSYLIHNCSNEEDII---KYYEQLKSAGGQITKYVFMALINAYTTCGEFEKAR 203
+ PDS T+ L+ + D++ K + ++S F ++++ +T G +KA
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 204 QVVLDA-EIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHL 262
E + + + + L+ G S A+ + E+ + GC ++ ++ L
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455
Query: 263 NSEGELNRLIQLLEEVHDPDYWMDGCCRLIL---HCVRFKQLSSATDLLKQLKDKFKDDE 319
L +L E+ + + D IL HC + L +A +L +++K+K +
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHC-KLGNLQNAMELFQKMKEKRIRLD 514
Query: 320 MAMEYHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGLPPSRKCLDFLLGACVNARDLKR 379
+ + F ++ D +I D++ K+ L P S L+ A + L
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAK-EIWADMVS--KEILPTPIS---YSILVNALCSKGHLAE 568
Query: 380 AHLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKLLSKM 422
A +W E + + V+ M K + SGN L KM
Sbjct: 569 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Query: 6 EITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLV 65
EI P+ SY L+ C + A V ++M+ + P+ NS++ S +
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG 604
Query: 66 RRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKE--MNLMPTASMYNAIM 123
+ P+ ++ ++I V+ ++ A+ L+ ++E L+P YN+I+
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSIL 664
Query: 124 AGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKYY 171
G+ R+ ++ A +VL++M + V PD T++ +I+ +++++ + +
Sbjct: 665 HGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAF 712
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 84/194 (43%), Gaps = 3/194 (1%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
+ P + Y LI C + VA+++ +M+Q T N+ILH +
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 67 RIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGY 126
+++ + L P+S T +I + K+ + +A L +KE + YN ++ G+
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 127 FRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN-CSNEE--DIIKYYEQLKSAGGQITK 183
+ D+ A + +M + P ++S L++ CS + + ++++ S + T
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTV 585
Query: 184 YVFMALINAYTTCG 197
+ ++I Y G
Sbjct: 586 MICNSMIKGYCRSG 599
Score = 35.8 bits (81), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Query: 8 TPSSASYKKLITYSCDLLKVHVALDVVEQMV--QGELVPSTETINSILHACEESYEFNLV 65
P SY LI + A +V++M QG LVP T NSILH +
Sbjct: 617 VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA 676
Query: 66 RRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMP 114
+ + + P+ T+ MI+ V + A+ + D++ + P
Sbjct: 677 EVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
>sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protein At2g34400
OS=Arabidopsis thaliana GN=PCMP-E23 PE=3 SV=2
Length = 621
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 124/266 (46%), Gaps = 15/266 (5%)
Query: 9 PSSASYKKLITYSCDLLKVH-VALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRR 67
P+ S+ +I + H AL + +M L P T N + AC + E + R
Sbjct: 94 PNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRS 153
Query: 68 IYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYF 127
++ + L+ + S+I + K A L D++ E + + +N++++GY
Sbjct: 154 VHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVS----WNSMISGYS 209
Query: 128 RKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDI--IKYYEQL---KSAGGQIT 182
+ A+ + ++ME+ +PD +T ++ CS+ D+ + E++ K G ++
Sbjct: 210 EAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIG--LS 267
Query: 183 KYVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVKSALVSALASHGRTSDAIIVYEE 242
++ LI+ Y CG+ + AR+V +K +A+++ + +G++S+A ++ E
Sbjct: 268 TFLGSKLISMYGKCGDLDSARRVFNQM---IKKDRVAWTAMITVYSQNGKSSEAFKLFFE 324
Query: 243 IKEAGCNLEPRAVIALIEHLNSEGEL 268
+++ G + + + ++ S G L
Sbjct: 325 MEKTGVSPDAGTLSTVLSACGSVGAL 350
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 63 NLVRRIYP-MICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNA 121
N +R+I M+ H KPN +I V++ DF+ + L +E P +N
Sbjct: 51 NQLRQIQAQMLLHSVEKPNF-----LIPKAVELGDFNYSSFLFSVTEE----PNHYSFNY 101
Query: 122 IMAGYFRK-KDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDII---KYYEQLKSA 177
++ G D + AL + + M+ + +KPD T++++ C+ E+I + L
Sbjct: 102 MIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKV 161
Query: 178 GGQITKYVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVK-SALVSALASHGRTSDA 236
G + ++ +LI Y CG+ AR++ + + R V ++++S + G DA
Sbjct: 162 GLERDVHINHSLIMMYAKCGQVGYARKLFDE----ITERDTVSWNSMISGYSEAGYAKDA 217
Query: 237 IIVYEEIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEV 278
+ ++ +++E G + R +++++ + G+L R +LLEE+
Sbjct: 218 MDLFRKMEEEGFEPDERTLVSMLGACSHLGDL-RTGRLLEEM 258
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 122/269 (45%), Gaps = 33/269 (12%)
Query: 5 LEITPSS--ASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEF 62
LE P+ + +I+ L + AL V +M+Q S+E I S++ +C + F
Sbjct: 303 LETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSF 362
Query: 63 NLVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAI 122
+L ++ + H ++ S+I++ K D + + + + E +L+ +NAI
Sbjct: 363 DLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVS----WNAI 418
Query: 123 MAGYFRKKDVQGALMVLKEMEQANVKP-DSQTFSYLIHNCSNEED----------IIKYY 171
++GY + D+ AL++ +EM+ V+ DS T L+ CS+ +I+ +
Sbjct: 419 ISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF 478
Query: 172 EQLKSAGGQITKYVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVKS--ALVSALAS 229
+ S V AL++ Y+ CG E A++ S +V S L++
Sbjct: 479 IRPCS-------LVDTALVDMYSKCGYLEAAQRC-----FDSISWKDVVSWGILIAGYGF 526
Query: 230 HGRTSDAIIVYEEIKEAGCNLEPRAVIAL 258
HG+ A+ +Y E +G +EP VI L
Sbjct: 527 HGKGDIALEIYSEFLHSG--MEPNHVIFL 553
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 86/187 (45%), Gaps = 10/187 (5%)
Query: 86 SMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQA 145
SM++L K A L D +++ +++ +N +++GY ++ L +L M
Sbjct: 184 SMLNLYCKCDHVGDAKDLFDQMEQRDMVS----WNTMISGYASVGNMSEILKLLYRMRGD 239
Query: 146 NVKPDSQTFSYLIHNCSNEEDI---IKYYEQLKSAGGQITKYVFMALINAYTTCGEFEKA 202
++PD QTF + D+ + Q+ G + ++ ALI Y CG+ E +
Sbjct: 240 GLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEAS 299
Query: 203 RQVVLDAEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHL 262
+V+ IP K + ++S L GR A+IV+ E+ ++G +L A+ +++
Sbjct: 300 YRVL--ETIPNKDVV-CWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASC 356
Query: 263 NSEGELN 269
G +
Sbjct: 357 AQLGSFD 363
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 121/297 (40%), Gaps = 52/297 (17%)
Query: 12 ASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPM 71
A ++ C V A D+ +QM Q ++V I+ S L+ R+
Sbjct: 180 AVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRG- 238
Query: 72 ICHHNLKPNSETFRSMISLNVKIKD---------------FDSAYSLLDDLKEMNL---- 112
L+P+ +TF + +S++ + D FD L L M L
Sbjct: 239 ---DGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGK 295
Query: 113 ----------MPTASM--YNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN 160
+P + + +++G R + AL+V EM Q+ S+ + ++ +
Sbjct: 296 EEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVAS 355
Query: 161 CSNEEDIIKYYEQLKSAGGQITKYVFM-------ALINAYTTCGEFEKARQVVLDAEIPV 213
C+ + ++ S G + ++ + +LI Y CG +K+ V+ + +
Sbjct: 356 CAQ----LGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSL-VIFE---RM 407
Query: 214 KSRSEVK-SALVSALASHGRTSDAIIVYEEIK-EAGCNLEPRAVIALIEHLNSEGEL 268
R V +A++S A + A++++EE+K + ++ V++L++ +S G L
Sbjct: 408 NERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGAL 464
Score = 36.2 bits (82), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 4/124 (3%)
Query: 31 LDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMICHHNLKPNSETFRSMISL 90
L M+ +L+P T T S+L AC + I+ + + + S+++L
Sbjct: 31 LSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNL 90
Query: 91 NVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPD 150
K A + ++++E +++ + A++ Y R V A ++ EM +KP
Sbjct: 91 YAKFGLLAHARKVFEEMRERDVVH----WTAMIGCYSRAGIVGEACSLVNEMRFQGIKPG 146
Query: 151 SQTF 154
T
Sbjct: 147 PVTL 150
>sp|Q56XR6|PP421_ARATH Pentatricopeptide repeat-containing protein At5g46680
OS=Arabidopsis thaliana GN=At5g46680 PE=2 SV=2
Length = 468
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 122/283 (43%), Gaps = 11/283 (3%)
Query: 4 KLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFN 63
+L + P +Y LI + + A V +M + + P T NS++ ++ N
Sbjct: 41 RLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLN 100
Query: 64 LVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLL-DDLKEMNLMPTASMYNAI 122
V +++ + H L P+ ++ +++S K+ A+ +L +D+ L+P YN +
Sbjct: 101 RVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNIL 160
Query: 123 MAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHNCSNEEDIIKY---YEQLKSAGG 179
+ + A+ + K + ++ VKP+ T++ LI+ + +LK +G
Sbjct: 161 LDALCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGY 219
Query: 180 QITKYVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVKS-ALVSALASHGRTSDAII 238
+ ++ Y EK Q+ L + + + A+VSAL GR +A
Sbjct: 220 TPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYE 279
Query: 239 VYEEIKEAGCNLEPRAVIALIEHLN---SEGELNRLIQLLEEV 278
E+ +G + +++ LN +G L+ + LLEE+
Sbjct: 280 CMHELVRSGT--RSQDIVSYNTLLNLYFKDGNLDAVDDLLEEI 320
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 79 PNSETFRSMISLN--VKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQGAL 136
P T IS+N K ++ + A +LL D + ++P YN ++ GY R + A
Sbjct: 9 PGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAY 68
Query: 137 MVLKEMEQANVKPDSQTFSYLIHNCSNE---EDIIKYYEQLKSAGGQITKYVFMALINAY 193
V + M +A ++PD T++ LI + +++ ++++ +G + + L++ Y
Sbjct: 69 AVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCY 128
Query: 194 TTCGEFEKARQVV-----LDAEIPVKSRSEVKSALVSALASHGRTSDAIIVYEEIK 244
G +A +++ L +P + + L+ AL G T +AI +++ +K
Sbjct: 129 FKLGRHGEAFKILHEDIHLAGLVP---GIDTYNILLDALCKSGHTDNAIELFKHLK 181
Score = 35.8 bits (81), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 19/241 (7%)
Query: 2 HAKLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYE 61
H K + P +Y LI C +V V+ M++ EL S T N++ +
Sbjct: 179 HLKSRVKPELMTYNILINGLCKSRRV----GSVDWMMR-ELKKSGYTPNAVTYTTMLKMY 233
Query: 62 FNLVRRIYPMICHHNLKPNSETFR-----SMISLNVKIKDFDSAYSLLDDL-KEMNLMPT 115
F R + +K TF +++S +K + AY + +L +
Sbjct: 234 FKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQD 293
Query: 116 ASMYNAIMAGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIH---NCSNEEDIIKYYE 172
YN ++ YF+ ++ +L+E+E +KPD T + +++ N N K+
Sbjct: 294 IVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLA 353
Query: 173 QLKSAGGQITKYVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVK-SALVSALASHG 231
+ G Q + LI+ G ++A ++ E+ R E +++V L G
Sbjct: 354 CIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEV----RDEFTYTSVVHNLCKDG 409
Query: 232 R 232
R
Sbjct: 410 R 410
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/455 (20%), Positives = 188/455 (41%), Gaps = 62/455 (13%)
Query: 10 SSASYKKLITYS-CDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRI 68
+S Y++++ D++KV A+D+ MV+ PS N +L A + +F LV +
Sbjct: 46 ASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISL 105
Query: 69 YPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFR 128
+ + + T+ I+ + A ++L + ++ P ++++ GY
Sbjct: 106 GEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCH 165
Query: 129 KKDVQGALMVLKEMEQANVKPDSQTFSYLIHNC---SNEEDIIKYYEQLKSAGGQITKYV 185
K + A+ ++ +M + KPD+ TF+ LIH + + + +Q+ G Q
Sbjct: 166 SKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 225
Query: 186 FMALINAYTTCGEFEKARQVV-------LDAEIPVKS----------------------- 215
+ ++N G+ + A ++ ++A++ + +
Sbjct: 226 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMD 285
Query: 216 ----RSEV--KSALVSALASHGRTSDAIIVYEEIKEAGCNLEPRAVIALIEHLNSEGELN 269
R +V S+L+S L ++GR SDA + ++ E N ALI+ EG+L
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 345
Query: 270 RLIQLLEEV----HDPDYW-----MDGCCRLILHCVRFKQLSSATDLLKQLKDKFKDDEM 320
+L +E+ DPD + ++G C +H +L A + + + K +
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFC---MH----DRLDEAKHMFELMISKDCFPNV 398
Query: 321 AMEYHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGLPPSRKCLDFLLGACVNARDLKRA 380
+ FC+ V+ G++L + + + GL + L+ ARD A
Sbjct: 399 VTYSTLIKGFCK-----AKRVEEGMELFREMS-QRGLVGNTVTYTTLIHGFFQARDCDNA 452
Query: 381 HLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSA 415
+++K+ + G+ N+L+Y + +G A
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 108/250 (43%), Gaps = 6/250 (2%)
Query: 4 KLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFN 63
KL P + L+ C ++ A+ +V+QMV+ P T T +++H + +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 64 LVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIM 123
+ + +P+ T+ ++++ K D D A SLL +++ + +YN I+
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 124 AGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIH---NCSNEEDIIKYYEQLKSAGGQ 180
G + K + AL + EM+ ++PD T+S LI N D + +
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 181 ITKYVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEV--KSALVSALASHGRTSDAII 238
F ALI+A+ G+ +A + + D I ++ S+L++ H R +A
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEK-LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 239 VYEEIKEAGC 248
++E + C
Sbjct: 385 MFELMISKDC 394
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 109/246 (44%), Gaps = 4/246 (1%)
Query: 6 EITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLV 65
+I P+ ++ LI K+ A + ++M++ + P T +S+++ +
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 66 RRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAG 125
+ ++ ++ + PN T+ ++I K K + L ++ + L+ Y ++ G
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 126 YFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN-CSNEE--DIIKYYEQLKSAGGQIT 182
+F+ +D A MV K+M V P+ T++ L+ C N + + +E L+ + +
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Query: 183 KYVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVK-SALVSALASHGRTSDAIIVYE 241
Y + +I G+ E ++ + + S + + + ++S G +A + +
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Query: 242 EIKEAG 247
++KE G
Sbjct: 563 KMKEDG 568
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 93/205 (45%), Gaps = 9/205 (4%)
Query: 7 ITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVR 66
I P +Y LI+ C+ + A ++ M++ ++ P+ T ++++ A + +
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 67 RIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGY 126
++Y + ++ P+ T+ S+I+ D A + + + + P Y+ ++ G+
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 127 FRKKDVQGALMVLKEMEQANVKPDSQTFSYLIH------NCSNEEDIIKYYEQLKSAGGQ 180
+ K V+ + + +EM Q + ++ T++ LIH +C N + + K Q+ S G
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK---QMVSVGVH 465
Query: 181 ITKYVFMALINAYTTCGEFEKARQV 205
+ L++ G+ KA V
Sbjct: 466 PNILTYNILLDGLCKNGKLAKAMVV 490
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 134/300 (44%), Gaps = 23/300 (7%)
Query: 9 PSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRI 68
P +Y ++ C + +AL ++++M +G++ N+I+ + + +
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNL 280
Query: 69 YPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFR 128
+ + + ++P+ T+ S+IS + A LL D+ E + P ++A++ + +
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340
Query: 129 KKDVQGALMVLKEMEQANVKPDSQTFSYLIHN-CSNEE-DIIKYYEQLKSAGGQITKYVF 186
+ + A + EM + ++ PD T+S LI+ C ++ D K+ +L I+K F
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL-----MISKDCF 395
Query: 187 MALINAYTTCGEFEKARQVVLDAEI--PVKSRSEVKSALVSALASHG----RTSD-AIIV 239
++ T F KA++V E+ + R V + + HG R D A +V
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 240 YEEIKEAGCNLEPRAVIALIEHLNSEGELNRLIQLLEEVH----DPDYW-----MDGCCR 290
++++ G + L++ L G+L + + + E + +PD + ++G C+
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/272 (17%), Positives = 120/272 (44%), Gaps = 7/272 (2%)
Query: 4 KLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFN 63
K I P +Y LI C ++ A + E M+ + P+ T ++++ ++
Sbjct: 356 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 64 LVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIM 123
++ + L N+ T+ ++I + +D D+A + + + + P YN ++
Sbjct: 416 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Query: 124 AGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN---CSNEEDIIKYYEQLKSAGGQ 180
G + + A++V + ++++ ++PD T++ +I ED + + L G
Sbjct: 476 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS 535
Query: 181 ITKYVFMALINAYTTCGEFEKARQVV--LDAEIPVKSRSEVKSALVSALASHGRTSDAII 238
+ +I+ + G E+A ++ + + P+ + + + + L R + A +
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAEL 595
Query: 239 VYEEIKEAGCNLEPRAVIALIEHLNSEGELNR 270
+ +E++ G + + I L+ ++ +G L++
Sbjct: 596 I-KEMRSCGFAGDA-STIGLVTNMLHDGRLDK 625
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 111/245 (45%), Gaps = 5/245 (2%)
Query: 6 EITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLV 65
+I P+ ++ LI K+ A + E+M+Q + P T T N +++ +
Sbjct: 323 KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA 382
Query: 66 RRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAG 125
++++ + + PN +T+ ++I+ K K + L ++ + L+ Y I+ G
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 126 YFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIHN-CS--NEEDIIKYYEQLKSAGGQIT 182
+F+ D A MV K+M V D T+S L+H CS + + ++ L+ + ++
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN 502
Query: 183 KYVFMALINAYTTCGEFEKARQVVLDAEIPVKSRSEVKSALVSALASHGRTSDAIIVYEE 242
+++ +I G+ +A L + +K + ++S L S +A ++ +
Sbjct: 503 IFIYNTMIEGMCKAGKVGEAWD--LFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRK 560
Query: 243 IKEAG 247
+KE G
Sbjct: 561 MKEDG 565
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 116/261 (44%), Gaps = 6/261 (2%)
Query: 14 YKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMIC 73
+ +I C V VA+D+ +M + P+ T NS+++ ++ R+ +
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 74 HHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDVQ 133
+ PN TF ++I K A L +++ + ++ P YN ++ G+ +
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 134 GALMVLKEMEQANVKPDSQTFSYLIHN---CSNEEDIIKYYEQLKSAGGQITKYVFMALI 190
A + K M + P+ QT++ LI+ C ED ++ + ++ G + +I
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 191 NAYTTCGEFEKARQVVLDAEIPVKSRSEVK--SALVSALASHGRTSDAIIVYEEIKEAGC 248
+ G+ + A Q+V + + +++ S L+ L S+G+ A+++++ ++++
Sbjct: 441 QGFFQAGDCDSA-QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 249 NLEPRAVIALIEHLNSEGELN 269
L +IE + G++
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVG 520
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/424 (19%), Positives = 181/424 (42%), Gaps = 21/424 (4%)
Query: 10 SSASYKKLITYS-CDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRI 68
+S Y++++ D++KV A+D+ MV+ PS N +L A + +F LV +
Sbjct: 46 ASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISL 105
Query: 69 YPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFR 128
+ + + T+ I+ + A ++L + ++ P ++++ GY
Sbjct: 106 GEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCH 165
Query: 129 KKDVQGALMVLKEMEQANVKPDSQTFSYLIHNC---SNEEDIIKYYEQLKSAGGQITKYV 185
K + A+ ++ +M + KPD+ TF+ LIH + + + +Q+ G Q
Sbjct: 166 SKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 225
Query: 186 FMALINAYTTCGEFEKARQVVLDAEIP-VKSRSEVKSALVSALASHGRTSDAIIVYEEIK 244
+ ++N G+ + A ++ E +K+ + + ++ +L + A+ ++ E++
Sbjct: 226 YGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEME 285
Query: 245 EAGCNLEPRAVI--ALIEHLNSEG---ELNRLI-QLLEEVHDPDYWMDGCCRLILHCVRF 298
G + P V +LI L + G + +RL+ +LE+ +P+ LI +
Sbjct: 286 TKG--IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA--LIDAFFKE 341
Query: 299 KQLSSATDLLKQLKDKFKDDEMAMEYHFSEIFCQIATTDPPDVQIGLDLLQFIKDELGLP 358
+L A L +++ + D + FC D + +F+ + LP
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK-----QMFKFMVSKDCLP 396
Query: 359 PSRKCLDFLLGACVNARDLKRAHLIWKEYENAGLPYNVLSYLWMYKAFLASGNRKSASKL 418
+ + G C + ++ +++E GL N ++Y + + F +G+ SA +
Sbjct: 397 NIQTYNTLINGFC-KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 419 LSKM 422
+M
Sbjct: 456 FKQM 459
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 91/205 (44%), Gaps = 3/205 (1%)
Query: 4 KLEITPSSASYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFN 63
KL P + L+ C ++ A+ +V+QMV+ P T T +++H + +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 64 LVRRIYPMICHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIM 123
+ + +P+ T+ ++++ K D D A +LL+ ++ + ++N I+
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 124 AGYFRKKDVQGALMVLKEMEQANVKPDSQTFSYLIH---NCSNEEDIIKYYEQLKSAGGQ 180
+ + V+ A+ + EME ++P+ T++ LI+ N D + +
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 181 ITKYVFMALINAYTTCGEFEKARQV 205
F ALI+A+ G+ +A ++
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKL 350
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 66/147 (44%), Gaps = 3/147 (2%)
Query: 13 SYKKLITYSCDLLKVHVALDVVEQMVQGELVPSTETINSILHACEESYEFNLVRRIYPMI 72
+Y L+ C K+ AL + + + + E+ + N+++ ++ + V + +
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK---VGEAWDLF 526
Query: 73 CHHNLKPNSETFRSMISLNVKIKDFDSAYSLLDDLKEMNLMPTASMYNAIMAGYFRKKDV 132
C ++KP+ T+ +MIS + A L +KE +P + YN ++ R D
Sbjct: 527 CSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDR 586
Query: 133 QGALMVLKEMEQANVKPDSQTFSYLIH 159
+ ++KEM + D+ T S + +
Sbjct: 587 AASAELIKEMRSSGFVGDASTISLVTN 613
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 166,607,943
Number of Sequences: 539616
Number of extensions: 6766786
Number of successful extensions: 21606
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 197
Number of HSP's that attempted gapping in prelim test: 17941
Number of HSP's gapped (non-prelim): 2161
length of query: 465
length of database: 191,569,459
effective HSP length: 121
effective length of query: 344
effective length of database: 126,275,923
effective search space: 43438917512
effective search space used: 43438917512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)