Query 012366
Match_columns 465
No_of_seqs 176 out of 2141
Neff 11.0
Searched_HMMs 46136
Date Fri Mar 29 01:53:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012366.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012366hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.5E-79 3.3E-84 578.1 41.8 418 35-460 25-488 (489)
2 PLN03234 cytochrome P450 83B1; 100.0 1.7E-73 3.8E-78 556.3 43.3 427 33-459 25-498 (499)
3 KOG0158 Cytochrome P450 CYP3/C 100.0 4E-74 8.7E-79 532.7 36.1 368 83-460 116-499 (499)
4 PLN02687 flavonoid 3'-monooxyg 100.0 1.8E-72 3.8E-77 549.7 45.0 458 1-462 1-511 (517)
5 PLN02183 ferulate 5-hydroxylas 100.0 4.2E-72 9.2E-77 546.9 42.2 425 34-461 34-513 (516)
6 PLN02971 tryptophan N-hydroxyl 100.0 8.5E-72 1.8E-76 546.5 43.7 426 29-459 50-533 (543)
7 PLN03112 cytochrome P450 famil 100.0 1.3E-70 2.7E-75 537.7 44.4 447 13-463 10-511 (514)
8 PLN02966 cytochrome P450 83A1 100.0 1.2E-70 2.6E-75 535.3 41.2 426 33-460 26-498 (502)
9 PLN00110 flavonoid 3',5'-hydro 100.0 3.2E-70 7E-75 530.5 42.6 422 33-460 28-497 (504)
10 PLN00168 Cytochrome P450; Prov 100.0 6.7E-69 1.4E-73 524.7 43.5 445 12-461 11-518 (519)
11 PTZ00404 cytochrome P450; Prov 100.0 7.5E-69 1.6E-73 521.4 37.9 409 33-459 26-482 (482)
12 PLN02290 cytokinin trans-hydro 100.0 3.6E-69 7.7E-74 527.7 34.7 368 81-461 141-516 (516)
13 KOG0157 Cytochrome P450 CYP4/C 100.0 2.8E-69 6.1E-74 519.4 33.4 411 34-460 33-496 (497)
14 PLN02394 trans-cinnamate 4-mon 100.0 1E-67 2.2E-72 516.2 40.4 419 33-459 27-501 (503)
15 PLN02500 cytochrome P450 90B1 100.0 5.7E-68 1.2E-72 515.4 38.4 400 32-458 34-488 (490)
16 PLN02655 ent-kaurene oxidase 100.0 3.2E-67 7E-72 506.5 36.9 410 38-460 1-464 (466)
17 PLN03018 homomethionine N-hydr 100.0 1.5E-65 3.3E-70 498.5 44.0 424 31-460 35-524 (534)
18 PLN02774 brassinosteroid-6-oxi 100.0 1E-66 2.2E-71 502.6 35.1 394 35-458 30-462 (463)
19 PLN02169 fatty acid (omega-1)- 100.0 2.7E-66 5.9E-71 502.0 36.1 363 81-459 116-499 (500)
20 PLN03195 fatty acid omega-hydr 100.0 3.1E-66 6.7E-71 506.5 34.7 368 81-460 112-516 (516)
21 PLN02196 abscisic acid 8'-hydr 100.0 4.1E-65 9E-70 491.0 36.8 424 1-459 1-462 (463)
22 PLN02302 ent-kaurenoic acid ox 100.0 4.8E-64 1E-68 490.1 39.5 405 32-461 38-489 (490)
23 KOG0159 Cytochrome P450 CYP11/ 100.0 1.3E-64 2.8E-69 458.1 31.8 414 33-460 47-518 (519)
24 PLN02738 carotene beta-ring hy 100.0 3E-64 6.4E-69 494.5 36.1 366 85-462 214-597 (633)
25 PLN03141 3-epi-6-deoxocathaste 100.0 1.5E-63 3.2E-68 479.6 36.0 399 33-461 4-451 (452)
26 PF00067 p450: Cytochrome P450 100.0 4.3E-65 9.4E-70 496.5 25.4 389 38-432 1-442 (463)
27 PLN02987 Cytochrome P450, fami 100.0 2E-62 4.3E-67 470.6 38.8 399 32-460 26-469 (472)
28 PLN02426 cytochrome P450, fami 100.0 1.3E-62 2.8E-67 475.6 37.1 365 81-461 120-501 (502)
29 PLN02936 epsilon-ring hydroxyl 100.0 1.3E-61 2.9E-66 469.4 32.8 411 37-462 13-484 (489)
30 KOG0684 Cytochrome P450 [Secon 100.0 1.8E-59 3.8E-64 414.1 30.3 406 36-460 31-485 (486)
31 PLN02648 allene oxide synthase 100.0 1.4E-52 3.1E-57 399.2 27.1 373 31-432 12-464 (480)
32 COG2124 CypX Cytochrome P450 [ 100.0 1.3E-51 2.9E-56 388.2 29.6 301 81-430 87-387 (411)
33 PF12508 DUF3714: Protein of u 65.5 1.5 3.2E-05 36.7 -0.8 43 312-355 52-94 (200)
34 PF08492 SRP72: SRP72 RNA-bind 62.7 6 0.00013 25.6 1.7 8 374-381 44-51 (59)
35 PHA03049 IMV membrane protein; 52.9 31 0.00066 22.7 3.7 9 33-41 28-36 (68)
36 PF12554 MOZART1: Mitotic-spin 50.6 45 0.00098 20.5 4.0 42 253-294 6-47 (48)
37 PF05952 ComX: Bacillus compet 49.5 17 0.00036 23.3 2.1 22 274-295 3-24 (57)
38 PF05545 FixQ: Cbb3-type cytoc 47.7 31 0.00067 21.3 3.2 19 7-25 12-30 (49)
39 PF15183 MRAP: Melanocortin-2 45.4 76 0.0016 22.0 4.8 10 33-42 71-80 (90)
40 KOG3506 40S ribosomal protein 44.0 11 0.00023 23.6 0.6 11 393-403 12-22 (56)
41 PF15330 SIT: SHP2-interacting 40.2 68 0.0015 23.9 4.5 11 43-53 45-55 (107)
42 PF14129 DUF4296: Domain of un 39.9 1.2E+02 0.0025 21.5 5.6 50 250-299 30-79 (87)
43 PF14483 Cut8_M: Cut8 dimerisa 38.2 49 0.0011 19.2 2.7 17 276-292 18-35 (38)
44 PF12273 RCR: Chitin synthesis 37.8 11 0.00023 29.3 -0.0 15 10-24 4-18 (130)
45 PRK06789 flagellar motor switc 37.3 33 0.00071 23.5 2.2 39 319-357 22-63 (74)
46 TIGR03779 Bac_Flav_CT_M Bacter 36.0 9.2 0.0002 36.0 -0.8 44 311-355 254-297 (410)
47 PF05366 Sarcolipin: Sarcolipi 30.9 65 0.0014 16.9 2.1 13 15-27 15-27 (31)
48 PF06667 PspB: Phage shock pro 29.1 1.1E+02 0.0024 21.1 3.7 6 89-94 68-73 (75)
49 COG3954 PrkB Phosphoribulokina 27.6 1.6E+02 0.0034 24.6 4.9 64 262-325 14-89 (289)
50 PHA03162 hypothetical protein; 26.3 59 0.0013 24.9 2.2 25 396-420 2-26 (135)
51 PF13260 DUF4051: Protein of u 25.9 87 0.0019 19.0 2.4 16 1-16 1-16 (54)
52 PF11227 DUF3025: Protein of u 25.5 42 0.00092 28.3 1.5 19 359-377 193-211 (212)
53 PF09201 SRX: SRX; InterPro: 24.8 71 0.0015 24.8 2.4 22 400-421 18-39 (148)
54 TIGR02736 cbb3_Q_epsi cytochro 24.7 1.4E+02 0.003 19.0 3.2 19 11-29 7-25 (56)
55 PF11027 DUF2615: Protein of u 22.7 1.8E+02 0.004 21.4 4.1 23 8-30 56-78 (103)
56 PF07886 BA14K: BA14K-like pro 22.4 82 0.0018 17.3 1.7 14 390-403 18-31 (31)
57 PF08285 DPM3: Dolichol-phosph 22.4 97 0.0021 22.3 2.6 28 271-298 54-81 (91)
58 PF07849 DUF1641: Protein of u 22.4 99 0.0021 18.4 2.3 19 274-292 13-31 (42)
59 cd04518 TBP_archaea archaeal T 22.1 40 0.00087 27.7 0.8 35 371-405 29-63 (174)
60 COG2101 SPT15 TATA-box binding 21.5 26 0.00057 28.3 -0.4 50 371-421 35-84 (185)
61 PRK11875 psbT photosystem II r 21.3 1.5E+02 0.0033 16.2 2.5 8 1-8 1-8 (31)
62 PF10777 YlaC: Inner membrane 20.5 72 0.0016 25.1 1.7 38 277-314 115-152 (155)
63 PRK13467 F0F1 ATP synthase sub 20.3 1.4E+02 0.0031 19.9 2.9 24 270-293 20-43 (66)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-79 Score=578.08 Aligned_cols=418 Identities=43% Similarity=0.781 Sum_probs=364.3
Q ss_pred CCCCCCCCCCCcccccccccCCCCchHHHHhhcC-------------------------------------CC-ccchhh
Q 012366 35 SNLPPGPRKLPVIGNLHQLVGSLPHHGLRDLAKK-------------------------------------PP-VLAAKI 76 (465)
Q Consensus 35 ~~~pPgP~~~p~lG~~~~~~~~~~~~~~~~~~~~-------------------------------------~~-~~~~~~ 76 (465)
+++||||+++|++||++++....+|..+.+|+++ |. ......
T Consensus 25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~ 104 (489)
T KOG0156|consen 25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKY 104 (489)
T ss_pred CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHH
Confidence 7899999999999999999433499999999988 22 223466
Q ss_pred hccCCCceEeCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHHHHHHHHh-CCCCceehhHHHHHHHHHHHhhhhh
Q 012366 77 MSYDNSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCNLINWISS-NEGSVINLTEKVFSLMYGITSRAAF 155 (465)
Q Consensus 77 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~vd~~~~~~~~~~~vi~~~~f 155 (465)
+.+++.+++++.+|+.|+.+||+++..+++.+.++++.....++++.+++.+.+ ..+++||+.+.+..+++++|++++|
T Consensus 105 ~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~~~f 184 (489)
T KOG0156|consen 105 LSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICRMLF 184 (489)
T ss_pred hcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHHHHh
Confidence 677889999999999999999999999999999999988889999999999985 2227999999999999999999999
Q ss_pred ccCcchH--H---HHHHHHHHHHhhhcccchhhhcc-cchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCc
Q 012366 156 GNKSSEQ--E---AFVSVMEETTKVISGFNIADLFP-SFELLQWVTGFRSHAEKLHQQADRIVESIINDHKKCETKNESD 229 (465)
Q Consensus 156 G~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 229 (465)
|.+++.+ + ++.+.+.+.......+.+.+++| +++++.+..+..+.......++..+++++|+++++..+. ++.
T Consensus 185 G~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~~~-~~~ 263 (489)
T KOG0156|consen 185 GRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKIGD-EEG 263 (489)
T ss_pred CCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCC
Confidence 9998752 2 46778888888888888999999 566665555677778888888999999999999876421 223
Q ss_pred ccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCCCCcCcccc
Q 012366 230 RDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFNRKGKIDETGI 309 (465)
Q Consensus 230 ~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~ 309 (465)
.|++|.+++..++++... ++++++...+.++++||+|||++++.|++.+|++||++|+|+|+||++++|.++.++.+|+
T Consensus 264 ~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~ 342 (489)
T KOG0156|consen 264 RDFVDALLKLMKEEKAEG-LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSESDL 342 (489)
T ss_pred CcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChhhh
Confidence 899999999987654223 8999999999999999999999999999999999999999999999999999888999999
Q ss_pred CCChhHHHHHHhhcCCCCCCCCC-CcccCCCceecCeeeCCCCEEEEechhcccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 012366 310 SEMKYLKLVVKETLRLRPSAPLI-PRECGESCEINGFNIPVKARIIVNSWATGRDPMYWTQPESFIPERFIDHSVDFKGS 388 (465)
Q Consensus 310 ~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~~ 388 (465)
.+||||+|+|+|++|++|++|.. +|.+++|+.++||.|||||.|.++.+++|+||++|+||++|+||||++++ +.++.
T Consensus 343 ~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~-d~~~~ 421 (489)
T KOG0156|consen 343 PKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN-DGKGL 421 (489)
T ss_pred ccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc-cccCC
Confidence 99999999999999999999998 99999999999999999999999999999999999999999999999875 33446
Q ss_pred CcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCCceeEeeccCC
Q 012366 389 NFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQDLCMIPTPYH 460 (465)
Q Consensus 389 ~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (465)
...++|||.|.|+|||..||.+++.++++.++++|+|+++++ . +++... +.++..+.++...+.+|.
T Consensus 422 ~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~---~d~~e~-~~~~~~~~pl~~~~~~r~ 488 (489)
T KOG0156|consen 422 DFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-K---VDMEEA-GLTLKKKKPLKAVPVPRL 488 (489)
T ss_pred ceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-C---CCCccc-ccceecCCcceeeeecCC
Confidence 678999999999999999999999999999999999999887 2 445555 366677767887777764
No 2
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=1.7e-73 Score=556.26 Aligned_cols=427 Identities=38% Similarity=0.715 Sum_probs=343.6
Q ss_pred CCCCCCCCCCCCCcccccccccCCCCchHHHHhhcC----------------------------CCc---------cchh
Q 012366 33 TTSNLPPGPRKLPVIGNLHQLVGSLPHHGLRDLAKK----------------------------PPV---------LAAK 75 (465)
Q Consensus 33 ~~~~~pPgP~~~p~lG~~~~~~~~~~~~~~~~~~~~----------------------------~~~---------~~~~ 75 (465)
++.+.||||+++|++||++++...+++.++.+++++ ... ....
T Consensus 25 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~ 104 (499)
T PLN03234 25 KSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQ 104 (499)
T ss_pred CCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhh
Confidence 345689999999999999998444788899998876 000 0001
Q ss_pred hhccCCCceEeCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHHHHHHHHh--CCCCceehhHHHHHHHHHHHhhh
Q 012366 76 IMSYDNSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCNLINWISS--NEGSVINLTEKVFSLMYGITSRA 153 (465)
Q Consensus 76 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~vi~~~ 153 (465)
...+.+.++.+...++.|+++|+.++.++|++++++.+.+.++++++++++.+.+ .+++++|+.+.+..+++|+++++
T Consensus 105 ~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~ 184 (499)
T PLN03234 105 TMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQ 184 (499)
T ss_pred hhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHHH
Confidence 1111233344556678999999986679999999999999999999999999964 45678999999999999999999
Q ss_pred hhccCcchHH----HHHHHHHHHHhhhcccchhhhcccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCc
Q 012366 154 AFGNKSSEQE----AFVSVMEETTKVISGFNIADLFPSFELLQWVTGFRSHAEKLHQQADRIVESIINDHKKCETKNESD 229 (465)
Q Consensus 154 ~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 229 (465)
+||.+++..+ ++.+...+.........+...+|++.++.++.+..++..++.+.+.+++.++++++.+....+...
T Consensus 185 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 264 (499)
T PLN03234 185 AFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRPKQET 264 (499)
T ss_pred HhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCc
Confidence 9999876432 333333333322222334455666554433344445677888899999999998876543222345
Q ss_pred ccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCCCCcCcccc
Q 012366 230 RDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFNRKGKIDETGI 309 (465)
Q Consensus 230 ~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~ 309 (465)
.|+++.|++..++++....++++++.+++.++++||+|||+++++|++++|++||++|+|+|+|+++++++.+.++++++
T Consensus 265 ~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l 344 (499)
T PLN03234 265 ESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDI 344 (499)
T ss_pred ccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHH
Confidence 79999999766443222358999999999999999999999999999999999999999999999999987777899999
Q ss_pred CCChhHHHHHHhhcCCCCCCCCC-CcccCCCceecCeeeCCCCEEEEechhcccCCCCC-CCCCCCCCCCCCCCCCC--C
Q 012366 310 SEMKYLKLVVKETLRLRPSAPLI-PRECGESCEINGFNIPVKARIIVNSWATGRDPMYW-TQPESFIPERFIDHSVD--F 385 (465)
Q Consensus 310 ~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~-~~p~~F~P~R~~~~~~~--~ 385 (465)
++||||+|||+|++|++|+++.. +|.+.+|++++|+.||+||.|.++.+.+||||++| +||++|+||||+++... .
T Consensus 345 ~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~ 424 (499)
T PLN03234 345 PNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDF 424 (499)
T ss_pred hcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCc
Confidence 99999999999999999999997 89999999999999999999999999999999999 89999999999975432 1
Q ss_pred CCCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCCceeEeeccC
Q 012366 386 KGSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQDLCMIPTPY 459 (465)
Q Consensus 386 ~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (465)
+..+..++|||.|+|.|+|+++|++|+++++|.|+++|++++.++..++.+++....++...++.++.+.++.|
T Consensus 425 ~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (499)
T PLN03234 425 KGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH 498 (499)
T ss_pred CCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence 23456899999999999999999999999999999999999988755556677777888888888888887765
No 3
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4e-74 Score=532.65 Aligned_cols=368 Identities=27% Similarity=0.451 Sum_probs=299.1
Q ss_pred ceEeCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHHHHHHHHhCCC--CceehhHHHHHHHHHHHhhhhhccCcc
Q 012366 83 GIIFSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCNLINWISSNEG--SVINLTEKVFSLMYGITSRAAFGNKSS 160 (465)
Q Consensus 83 ~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~vd~~~~~~~~~~~vi~~~~fG~~~~ 160 (465)
..+|...|++||++|.. ++|.|+..+++.|.+.+++.++++++.+.++.. ..+++.+.+.+++.|||++++||.+.+
T Consensus 116 ~~Lf~~~g~~WK~lR~~-lsP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~~AfG~~~~ 194 (499)
T KOG0158|consen 116 LNLFFLRGERWKRLRTK-LSPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGSCAFGLDAN 194 (499)
T ss_pred cCchhccCchHHHHHHh-hccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhHhhcccchh
Confidence 45677889999999999 699999999999999999999999999986332 588999999999999999999999876
Q ss_pred hH----HHHHHHHHHHHhh-hcccch----hhhcccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCccc
Q 012366 161 EQ----EAFVSVMEETTKV-ISGFNI----ADLFPSFELLQWVTGFRSHAEKLHQQADRIVESIINDHKKCETKNESDRD 231 (465)
Q Consensus 161 ~~----~~~~~~~~~~~~~-~~~~~~----~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d 231 (465)
.. .++.......... .....+ ...+|.+.. ............+.+.+.+...++.+.+ .+...+|
T Consensus 195 s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~---~l~~~~~~~~~~~~~~~~v~~~v~~R~~---~~~~r~D 268 (499)
T KOG0158|consen 195 SLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLAL---PLRVKLFPEDVTDFFRKLVNSRVEQREK---ENIERND 268 (499)
T ss_pred hhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHH---hhhcccChHHHHHHHHHHHHHHHHHHHh---cCCCCch
Confidence 42 3444433333332 111111 112222211 0011223445556666666666666633 2256899
Q ss_pred HHHHHHHhhhc--CCC-CC-CCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCCCCcCcc
Q 012366 232 LVDVLLKIQED--GNL-EL-PLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFNRKGKIDET 307 (465)
Q Consensus 232 ~l~~ll~~~~~--~~~-~~-~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~ 307 (465)
+++.+++...+ .+. .. .++.++|+++++.+++||.||||++|++++|+||+|||+|+|||+||++++.+...+++|
T Consensus 269 fi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd 348 (499)
T KOG0158|consen 269 FIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYD 348 (499)
T ss_pred HHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHH
Confidence 99999999864 111 11 499999999999999999999999999999999999999999999999998776569999
Q ss_pred ccCCChhHHHHHHhhcCCCCCCCCCCcccCCCceec-CeeeCCCCEEEEechhcccCCCCCCCCCCCCCCCCCCCCCCCC
Q 012366 308 GISEMKYLKLVVKETLRLRPSAPLIPRECGESCEIN-GFNIPVKARIIVNSWATGRDPMYWTQPESFIPERFIDHSVDFK 386 (465)
Q Consensus 308 ~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~-g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~ 386 (465)
.+.+|+||++||+||||+||+++...|.|++|.+++ |+.||+|+.|.++++++||||++||||++|+||||.+++.+ .
T Consensus 349 ~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~-~ 427 (499)
T KOG0158|consen 349 SLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK-S 427 (499)
T ss_pred HHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCccc-c
Confidence 999999999999999999999999999999999999 99999999999999999999999999999999999987644 4
Q ss_pred CCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCCceeEeeccCC
Q 012366 387 GSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQDLCMIPTPYH 460 (465)
Q Consensus 387 ~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (465)
..+..|+|||.|||.|+|.+||.+|+|++|++||++|+++..+.+. .+ ......+.+..|++++.+++++|.
T Consensus 428 ~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~-~~-~~~~~~~~~l~pk~gi~Lkl~~r~ 499 (499)
T KOG0158|consen 428 RHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTI-IP-LEGDPKGFTLSPKGGIWLKLEPRD 499 (499)
T ss_pred cCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCccc-Cc-ccCCccceeeecCCceEEEEEeCC
Confidence 4677999999999999999999999999999999999999988433 22 222233677899999999999884
No 4
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=1.8e-72 Score=549.67 Aligned_cols=458 Identities=37% Similarity=0.698 Sum_probs=354.3
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCCcccccccccCCCCchHHHHhhcC------------
Q 012366 1 MELEFPTFQIFLAFLVFVFILLKLEKTSKTNNTTSNLPPGPRKLPVIGNLHQLVGSLPHHGLRDLAKK------------ 68 (465)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgP~~~p~lG~~~~~~~~~~~~~~~~~~~~------------ 68 (465)
|++-.+.+...++++ ++++++++.+.+.+.+..+.||||.++|++||++++ ..+++.++.+|+++
T Consensus 1 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~ 77 (517)
T PLN02687 1 MDLPLPLLLGTVAVS--VLVWCLLLRRGGSGKHKRPLPPGPRGWPVLGNLPQL-GPKPHHTMAALAKTYGPLFRLRFGFV 77 (517)
T ss_pred CCCcchHHHHHHHHH--HHHHHHHhccccCCCCCCCCCccCCCCCccccHHhc-CCchhHHHHHHHHHhCCeeEEecCCc
Confidence 566555544333323 333333333444444556789999999999999998 66788999998886
Q ss_pred -------C------------------CccchhhhccCCCceEeCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHH
Q 012366 69 -------P------------------PVLAAKIMSYDNSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCN 123 (465)
Q Consensus 69 -------~------------------~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~ 123 (465)
| .......+...+.+.+++.+|+.|+++|+.+..++|+.+.++.+.+.++++++.
T Consensus 78 ~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~ 157 (517)
T PLN02687 78 DVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVAL 157 (517)
T ss_pred eEEEeCCHHHHHHHHHhcchhhhcCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHH
Confidence 0 000011122223467788889999999999644899999999999999999999
Q ss_pred HHHHHHh-CCCCceehhHHHHHHHHHHHhhhhhccCcch------HHHHHHHHHHHHhhhcccchhhhcccchhhhhhhh
Q 012366 124 LINWISS-NEGSVINLTEKVFSLMYGITSRAAFGNKSSE------QEAFVSVMEETTKVISGFNIADLFPSFELLQWVTG 196 (465)
Q Consensus 124 l~~~l~~-~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~ 196 (465)
+++.+.+ .+++++|+.+.+..+++|+++.++||.++.. .+.+.+.+..+............+|++.++.. ..
T Consensus 158 l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~-~~ 236 (517)
T PLN02687 158 LVRELARQHGTAPVNLGQLVNVCTTNALGRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDL-QG 236 (517)
T ss_pred HHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCc-cc
Confidence 9999975 3557899999999999999999999987531 12455555544443332233355665443211 11
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCcccHHHHHHHhhhcC---CCCCCCCHHHHHHHHHHhhccCCcchHHH
Q 012366 197 FRSHAEKLHQQADRIVESIINDHKKCETK-NESDRDLVDVLLKIQEDG---NLELPLSTHNIKAVISDIFGAGSETSATT 272 (465)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~d~l~~ll~~~~~~---~~~~~~~~~~i~~~~~~~~~ag~~tt~~~ 272 (465)
..++..+..+.+.+++.++++++++.... +....|+++.+++...++ +....++++++.+++..+++||+|||+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~ 316 (517)
T PLN02687 237 VVGKMKRLHRRFDAMMNGIIEEHKAAGQTGSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSST 316 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHH
Confidence 23455666777888888888887765332 134579999999876432 11235899999999999999999999999
Q ss_pred HHHHHHHHHhCchHHHHHHHHHHHHhcCCCCcCccccCCChhHHHHHHhhcCCCCCCCCC-CcccCCCceecCeeeCCCC
Q 012366 273 VDWAMCEMMKNPGVMKKAQAEVREVFNRKGKIDETGISEMKYLKLVVKETLRLRPSAPLI-PRECGESCEINGFNIPVKA 351 (465)
Q Consensus 273 l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~i~g~~ip~gt 351 (465)
++|++++|++||++|+|+++||++++++.+.++.+++++||||+|||+|+||++|+++.. +|.+.+|++++|+.||+||
T Consensus 317 l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt 396 (517)
T PLN02687 317 VEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGA 396 (517)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCC
Confidence 999999999999999999999999998777889999999999999999999999999985 9999999999999999999
Q ss_pred EEEEechhcccCCCCCCCCCCCCCCCCCCCCCC----CCCCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccC
Q 012366 352 RIIVNSWATGRDPMYWTQPESFIPERFIDHSVD----FKGSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKL 427 (465)
Q Consensus 352 ~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~----~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~ 427 (465)
.|.++.+.+|+||++|+||++|+||||++++.. ....+..++|||.|+|.|+|++||.+|+++++|.|+++|++++
T Consensus 397 ~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~ 476 (517)
T PLN02687 397 TLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWEL 476 (517)
T ss_pred EEEEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceec
Confidence 999999999999999999999999999975321 1123457999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCcccccCCceeEeeccCCCC
Q 012366 428 PNGMNHEDLEMTETFGVTVRRKQDLCMIPTPYHHS 462 (465)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (465)
.++..++++++....++++.+..++.++.++|..|
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~ 511 (517)
T PLN02687 477 ADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPRLLP 511 (517)
T ss_pred CCCCCcccCCcccccceeeecCCCeEEeeccCCCh
Confidence 87654444444445667677778899999999655
No 5
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=4.2e-72 Score=546.86 Aligned_cols=425 Identities=40% Similarity=0.772 Sum_probs=333.3
Q ss_pred CCCCCCCCCCCCcccccccccCCCCchHHHHhhcC-------------------------------------CCccchhh
Q 012366 34 TSNLPPGPRKLPVIGNLHQLVGSLPHHGLRDLAKK-------------------------------------PPVLAAKI 76 (465)
Q Consensus 34 ~~~~pPgP~~~p~lG~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~ 76 (465)
+.+.||||+++|++|+++++ ....+..+.+|+++ +.......
T Consensus 34 ~~~~ppgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~ 112 (516)
T PLN02183 34 RLPYPPGPKGLPIIGNMLMM-DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISY 112 (516)
T ss_pred CCCCCcCCCCCCeeccHHhc-CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhc
Confidence 34689999999999999887 55667788888875 00000001
Q ss_pred hccCCCceEeCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHHHHHHHHhCCCCceehhHHHHHHHHHHHhhhhhc
Q 012366 77 MSYDNSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCNLINWISSNEGSVINLTEKVFSLMYGITSRAAFG 156 (465)
Q Consensus 77 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~~fG 156 (465)
...++.+.+++.+|+.|+++|++++.++|+.+.++.+.+.+ ++++.+++.+.+..++++|+.+.+.+++.|++++++||
T Consensus 113 ~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi~~~~fG 191 (516)
T PLN02183 113 LTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSNIGKPVNIGELIFTLTRNITYRAAFG 191 (516)
T ss_pred cccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHhHhhc
Confidence 11112345778889999999999768899999999988864 67899999987555778999999999999999999999
Q ss_pred cCcchH-HHHHHHHHHHHhhhcccchhhhcccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhc-------CCC
Q 012366 157 NKSSEQ-EAFVSVMEETTKVISGFNIADLFPSFELLQWVTGFRSHAEKLHQQADRIVESIINDHKKCETK-------NES 228 (465)
Q Consensus 157 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~ 228 (465)
.+.+.. +++.+.+..+............+|++.++.. ....++..+..+.+.+++.++++++.+.... +..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 270 (516)
T PLN02183 192 SSSNEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDP-QGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADNDSEEA 270 (516)
T ss_pred CcccchHHHHHHHHHHHHHHhCCccHHHhcchhHhccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc
Confidence 876542 3455655555444443445556665543211 1223455666777777777777665442211 113
Q ss_pred cccHHHHHHHhhhcCC---------CCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhc
Q 012366 229 DRDLVDVLLKIQEDGN---------LELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFN 299 (465)
Q Consensus 229 ~~d~l~~ll~~~~~~~---------~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~ 299 (465)
.+|+++.+++...++. ....++++++.+.+.++++||+|||+++++|++++|++||++|+|+++||+++++
T Consensus 271 ~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~ 350 (516)
T PLN02183 271 ETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVG 350 (516)
T ss_pred cccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcC
Confidence 4689999998654311 1124899999999999999999999999999999999999999999999999998
Q ss_pred CCCCcCccccCCChhHHHHHHhhcCCCCCCCCCCcccCCCceecCeeeCCCCEEEEechhcccCCCCCCCCCCCCCCCCC
Q 012366 300 RKGKIDETGISEMKYLKLVVKETLRLRPSAPLIPRECGESCEINGFNIPVKARIIVNSWATGRDPMYWTQPESFIPERFI 379 (465)
Q Consensus 300 ~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~~ 379 (465)
.++.++.+++++||||+|||+|+||++|+++...|.+.+|++++|+.|||||.|.++.+.+|+||++|+||++|+||||+
T Consensus 351 ~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl 430 (516)
T PLN02183 351 LNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFL 430 (516)
T ss_pred CCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhcCCccccCCccccCchhhC
Confidence 66678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC-CCCCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCCceeEeecc
Q 012366 380 DHSVD-FKGSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQDLCMIPTP 458 (465)
Q Consensus 380 ~~~~~-~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (465)
+++.+ .......|+|||.|+|.|+|++||++|+++++|.|+++|++++.++..+++.+....++.+.++...+++.+++
T Consensus 431 ~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (516)
T PLN02183 431 KPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLVAVPTY 510 (516)
T ss_pred CCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCCCcEEEeec
Confidence 75432 12244579999999999999999999999999999999999988765433344444556655556688999998
Q ss_pred CCC
Q 012366 459 YHH 461 (465)
Q Consensus 459 ~~~ 461 (465)
|..
T Consensus 511 r~~ 513 (516)
T PLN02183 511 RLQ 513 (516)
T ss_pred CCC
Confidence 843
No 6
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=8.5e-72 Score=546.47 Aligned_cols=426 Identities=24% Similarity=0.485 Sum_probs=325.4
Q ss_pred CCCCCCCCCCCCCCCCCcccccccccCCC-CchHHHHhhcC--------------------------------------C
Q 012366 29 KTNNTTSNLPPGPRKLPVIGNLHQLVGSL-PHHGLRDLAKK--------------------------------------P 69 (465)
Q Consensus 29 ~~~~~~~~~pPgP~~~p~lG~~~~~~~~~-~~~~~~~~~~~--------------------------------------~ 69 (465)
.++.++.+.||||+++|++||++++..+. .+.++.+|+++ +
T Consensus 50 ~~~~r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp 129 (543)
T PLN02971 50 SRNKKLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRP 129 (543)
T ss_pred cccCCCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCC
Confidence 33445567999999999999999884332 35667777665 0
Q ss_pred CccchhhhccCCCceEeCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHHHHHHHHh--CCCCceehhHHHHHHHH
Q 012366 70 PVLAAKIMSYDNSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCNLINWISS--NEGSVINLTEKVFSLMY 147 (465)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~ 147 (465)
.......+..+..+++++.+|+.|+++|+.+..+++++...+.+.+.++++++.+++++.+ .+++++|+.+.+.++++
T Consensus 130 ~~~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~ 209 (543)
T PLN02971 130 LTYAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCG 209 (543)
T ss_pred cccchhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHH
Confidence 0111111211112357888899999999997677888877888999999999999998864 34568999999999999
Q ss_pred HHHhhhhhccCcch------HH---HHHHHHHHHHhhhc---ccchhhhcccchhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 012366 148 GITSRAAFGNKSSE------QE---AFVSVMEETTKVIS---GFNIADLFPSFELLQWVTGFRSHAEKLHQQADRIVESI 215 (465)
Q Consensus 148 ~vi~~~~fG~~~~~------~~---~~~~~~~~~~~~~~---~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (465)
+++++++||.++.. ++ +....+........ ...+.+.+|++.++. ..+..+......+.+.+++.++
T Consensus 210 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~ 288 (543)
T PLN02971 210 NAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLD-LNGHEKIMRESSAIMDKYHDPI 288 (543)
T ss_pred HHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhc-ccchHHHHHHHHHHHHHHHHHH
Confidence 99999999987521 11 22223333322211 122345566554321 1122344555667778888888
Q ss_pred HHHHHhhhhcC--CCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHH
Q 012366 216 INDHKKCETKN--ESDRDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAE 293 (465)
Q Consensus 216 i~~~~~~~~~~--~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~E 293 (465)
++++++..+.+ ....|+++.|++..++++ ...++++++.+++.++++||+|||+++++|++++|++||++|+|+|+|
T Consensus 289 i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~E 367 (543)
T PLN02971 289 IDERIKMWREGKRTQIEDFLDIFISIKDEAG-QPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEE 367 (543)
T ss_pred HHHHHHHHhccCCCCCcCHHHHHHhhhcccC-CCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 88776533221 224799999998654322 124899999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcCccccCCChhHHHHHHhhcCCCCCCCCC-CcccCCCceecCeeeCCCCEEEEechhcccCCCCCCCCCC
Q 012366 294 VREVFNRKGKIDETGISEMKYLKLVVKETLRLRPSAPLI-PRECGESCEINGFNIPVKARIIVNSWATGRDPMYWTQPES 372 (465)
Q Consensus 294 i~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~ 372 (465)
|++++++++.++++++.+||||+|||+|+||++|+++.. +|.+.+|++++||.|||||.|.++.+++|+||++|+||++
T Consensus 368 I~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~ 447 (543)
T PLN02971 368 IDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLS 447 (543)
T ss_pred HHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccc
Confidence 999999878899999999999999999999999999985 9999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCC--CCCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCC
Q 012366 373 FIPERFIDHSVDF--KGSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQ 450 (465)
Q Consensus 373 F~P~R~~~~~~~~--~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (465)
|+||||+++..+. ...+..++|||.|+|.|+|++||.+|+++++|.|+++|+|++.++.+. +++...++ ++-.+.
T Consensus 448 F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~--~~~~~~~~-~~~~~~ 524 (543)
T PLN02971 448 FKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETR--VELMESSH-DMFLSK 524 (543)
T ss_pred cCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCC--cchhhhcC-cccccc
Confidence 9999999754221 124567999999999999999999999999999999999998775432 44444455 553333
Q ss_pred ceeEeeccC
Q 012366 451 DLCMIPTPY 459 (465)
Q Consensus 451 ~~~~~~~~~ 459 (465)
.+.+.+++|
T Consensus 525 ~~~~~~~~~ 533 (543)
T PLN02971 525 PLVMVGELR 533 (543)
T ss_pred cceeeeeec
Confidence 677777777
No 7
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=1.3e-70 Score=537.67 Aligned_cols=447 Identities=31% Similarity=0.611 Sum_probs=347.2
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCCcccccccccCCCCchHHHHhhcC------------------------
Q 012366 13 AFLVFVFILLKLEKTSKTNNTTSNLPPGPRKLPVIGNLHQLVGSLPHHGLRDLAKK------------------------ 68 (465)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~pPgP~~~p~lG~~~~~~~~~~~~~~~~~~~~------------------------ 68 (465)
++++++.+++|.+.++ +++++.+.||||+++|++||++++ ..+++.++.+++++
T Consensus 10 ~~~~~~~~~~~~~~~~-~~~~~~~~ppgp~~~pl~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~ 87 (514)
T PLN03112 10 FSVLIFNVLIWRWLNA-SMRKSLRLPPGPPRWPIVGNLLQL-GPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIR 87 (514)
T ss_pred HHHHHHHHHHHHHccc-cccCCCCCccCCCCCCeeeeHHhc-CCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHH
Confidence 3334444444544444 444666789999999999999998 67788999998886
Q ss_pred -----CC-ccch-------hhhccCCCceEeCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHHHHHHHHh--CCC
Q 012366 69 -----PP-VLAA-------KIMSYDNSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCNLINWISS--NEG 133 (465)
Q Consensus 69 -----~~-~~~~-------~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~l~~--~~~ 133 (465)
.. .... ....++..+.+++.+|+.|+.+|+.+..++|+.++++.+.+.+.++++.+++.+.+ .++
T Consensus 88 ~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~ 167 (514)
T PLN03112 88 EILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTG 167 (514)
T ss_pred HHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccC
Confidence 00 0000 00011223345677899999999997778999999999999999999999998754 346
Q ss_pred CceehhHHHHHHHHHHHhhhhhccCcch--------HHHHHHHHHHHHhhhcccchhhhcccchhhhhhhhhHHHHHHHH
Q 012366 134 SVINLTEKVFSLMYGITSRAAFGNKSSE--------QEAFVSVMEETTKVISGFNIADLFPSFELLQWVTGFRSHAEKLH 205 (465)
Q Consensus 134 ~~vd~~~~~~~~~~~vi~~~~fG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~ 205 (465)
+++|+.+.+.+++++++++++||.++.. ..++.+.+..+........+...+|.+.++. ..+..++..+..
T Consensus 168 ~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~ 246 (514)
T PLN03112 168 KPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLD-PYGCEKKMREVE 246 (514)
T ss_pred CeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcC-cccHHHHHHHHH
Confidence 7899999999999999999999987631 1234444444433322223344556544321 112234556677
Q ss_pred HHHHHHHHHHHHHHHhhhhc---CCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHh
Q 012366 206 QQADRIVESIINDHKKCETK---NESDRDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMK 282 (465)
Q Consensus 206 ~~~~~~~~~~i~~~~~~~~~---~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~ 282 (465)
+.+.+++..+++++++..+. +.+..|+++.++++..+++ ...++++++.+++..+++||+|||+++++|++++|++
T Consensus 247 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~ 325 (514)
T PLN03112 247 KRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENG-KEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIK 325 (514)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCccchHHHHHHHhhcccc-ccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHh
Confidence 77888888888876654321 1234699999998654321 2348999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHhcCCCCcCccccCCChhHHHHHHhhcCCCCCCCCC-CcccCCCceecCeeeCCCCEEEEechhcc
Q 012366 283 NPGVMKKAQAEVREVFNRKGKIDETGISEMKYLKLVVKETLRLRPSAPLI-PRECGESCEINGFNIPVKARIIVNSWATG 361 (465)
Q Consensus 283 ~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~i~g~~ip~gt~v~~~~~~~~ 361 (465)
||++|+|+++||++++++++.++.+++++||||+|||+|++|++|+++.. +|.+.+|++++|+.|||||.|.++.+.+|
T Consensus 326 ~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h 405 (514)
T PLN03112 326 NPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLG 405 (514)
T ss_pred ChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhh
Confidence 99999999999999998877899999999999999999999999999986 89999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCC----CCCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCC
Q 012366 362 RDPMYWTQPESFIPERFIDHSVDF----KGSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLE 437 (465)
Q Consensus 362 ~d~~~~~~p~~F~P~R~~~~~~~~----~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 437 (465)
+||++|+||++|+||||.++..+. ......++|||.|+|.|||++||.+|++++++.|+++|++++.++...++.+
T Consensus 406 ~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~ 485 (514)
T PLN03112 406 RNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDID 485 (514)
T ss_pred CCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCC
Confidence 999999999999999986542110 1234579999999999999999999999999999999999987664334455
Q ss_pred cccccCcccccCCceeEeeccCCCCC
Q 012366 438 MTETFGVTVRRKQDLCMIPTPYHHSS 463 (465)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (465)
++...++.++++.++.++.++|..+.
T Consensus 486 ~~~~~~~~~~~~~~~~~~~~~r~~~~ 511 (514)
T PLN03112 486 TQEVYGMTMPKAKPLRAVATPRLAPH 511 (514)
T ss_pred CccccCcccccCCCeEEEeecCCccc
Confidence 65666777788889999999997764
No 8
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=1.2e-70 Score=535.28 Aligned_cols=426 Identities=36% Similarity=0.682 Sum_probs=325.0
Q ss_pred CCCCCCCCCCCCCcccccccccCCCCchHHHHhhcC-C----------------------------Cc--------cchh
Q 012366 33 TTSNLPPGPRKLPVIGNLHQLVGSLPHHGLRDLAKK-P----------------------------PV--------LAAK 75 (465)
Q Consensus 33 ~~~~~pPgP~~~p~lG~~~~~~~~~~~~~~~~~~~~-~----------------------------~~--------~~~~ 75 (465)
+..+.||||+++|++||++++...+++.++.+|+++ + .. ....
T Consensus 26 ~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~ 105 (502)
T PLN02966 26 KRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHE 105 (502)
T ss_pred CCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccce
Confidence 345689999999999999998555788999999886 0 00 0001
Q ss_pred hhccCCCceEeCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHHHHHHHHh--CCCCceehhHHHHHHHHHHHhhh
Q 012366 76 IMSYDNSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCNLINWISS--NEGSVINLTEKVFSLMYGITSRA 153 (465)
Q Consensus 76 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~vi~~~ 153 (465)
....+..+..+..+|+.|+.+|+.++.++|+.+.++.+.+.+++.++++++.|.+ ..++++|+.+.+..+++|+++.+
T Consensus 106 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~~ 185 (502)
T PLN02966 106 FISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQ 185 (502)
T ss_pred eeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHHH
Confidence 1111122344566799999999997789999999999999999999999999975 34568999999999999999999
Q ss_pred hhccCcchH-HH---HHHHHHHHHhhhcccchhhhcccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCc
Q 012366 154 AFGNKSSEQ-EA---FVSVMEETTKVISGFNIADLFPSFELLQWVTGFRSHAEKLHQQADRIVESIINDHKKCETKNESD 229 (465)
Q Consensus 154 ~fG~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 229 (465)
+||.+++.. ++ +.+.+...........+...+|++.++..+.+..+......+...+++.+.+++..+......+.
T Consensus 186 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 265 (502)
T PLN02966 186 AFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRVKPET 265 (502)
T ss_pred HhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 999987532 22 33333332323333334455665433221122222233344555566666665543322111234
Q ss_pred ccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCC--CCcCcc
Q 012366 230 RDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFNRK--GKIDET 307 (465)
Q Consensus 230 ~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~--~~~~~~ 307 (465)
.|+++.+++..++++....++.+++.++++++++||+|||+++++|++++|++||++|+|+++||+++++++ +.++++
T Consensus 266 ~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~ 345 (502)
T PLN02966 266 ESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTED 345 (502)
T ss_pred ccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHh
Confidence 689999998765432223589999999999999999999999999999999999999999999999998743 357899
Q ss_pred ccCCChhHHHHHHhhcCCCCCCCCC-CcccCCCceecCeeeCCCCEEEEechhcccCCCCC-CCCCCCCCCCCCCCCCCC
Q 012366 308 GISEMKYLKLVVKETLRLRPSAPLI-PRECGESCEINGFNIPVKARIIVNSWATGRDPMYW-TQPESFIPERFIDHSVDF 385 (465)
Q Consensus 308 ~~~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~-~~p~~F~P~R~~~~~~~~ 385 (465)
++++||||+|||+|+||++|+++.. +|.+.+|++++|+.||+||.|.++.+.+||||++| +||++|+||||++++.+.
T Consensus 346 dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~~ 425 (502)
T PLN02966 346 DVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDF 425 (502)
T ss_pred hccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCCCc
Confidence 9999999999999999999999986 89999999999999999999999999999999999 999999999999754322
Q ss_pred CCCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCCceeEeeccCC
Q 012366 386 KGSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQDLCMIPTPYH 460 (465)
Q Consensus 386 ~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (465)
...+..++|||+|+|.|+|++||.+|+++++|.|+++|+|++.++..++++++....|+...++..+ +++.|+
T Consensus 426 ~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 498 (502)
T PLN02966 426 KGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHL--KLVPEK 498 (502)
T ss_pred CCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCe--EEEEEe
Confidence 2345689999999999999999999999999999999999998876555566666667665343344 444443
No 9
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=3.2e-70 Score=530.47 Aligned_cols=422 Identities=34% Similarity=0.703 Sum_probs=335.1
Q ss_pred CCCCCCCCCCCCCcccccccccCCCCchHHHHhhcC-------------------------------------CCccchh
Q 012366 33 TTSNLPPGPRKLPVIGNLHQLVGSLPHHGLRDLAKK-------------------------------------PPVLAAK 75 (465)
Q Consensus 33 ~~~~~pPgP~~~p~lG~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~ 75 (465)
.+.+.||||+++|++|+++.+ ..+++.++.+++++ +......
T Consensus 28 ~~~~~pPgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~ 106 (504)
T PLN00110 28 PSRKLPPGPRGWPLLGALPLL-GNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGAT 106 (504)
T ss_pred ccCCCcccCCCCCeeechhhc-CCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchh
Confidence 455689999999999999888 66688899998876 0000000
Q ss_pred hhccCCCceEeCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHHHHHHHHh--CCCCceehhHHHHHHHHHHHhhh
Q 012366 76 IMSYDNSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCNLINWISS--NEGSVINLTEKVFSLMYGITSRA 153 (465)
Q Consensus 76 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~vi~~~ 153 (465)
....++.+.+++.+|+.|+++|+.+..++|+.+.++.+.+.+.++++.+++.+.+ .+|+++|+.+.+..+++|+++.+
T Consensus 107 ~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~~ 186 (504)
T PLN00110 107 HLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQV 186 (504)
T ss_pred hhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHHH
Confidence 1112234567788899999999996556899999999999999999999998865 45678999999999999999999
Q ss_pred hhccCcc-----hHHHHHHHHHHHHhhhcccchhhhcccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 012366 154 AFGNKSS-----EQEAFVSVMEETTKVISGFNIADLFPSFELLQWVTGFRSHAEKLHQQADRIVESIINDHKKCETKNES 228 (465)
Q Consensus 154 ~fG~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 228 (465)
+||.++. ..+++...+...........+...+|++.++. ..+..+...+..+.+.+++.+.++++.+.......
T Consensus 187 ~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 265 (504)
T PLN00110 187 ILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMD-IQGIERGMKHLHKKFDKLLTRMIEEHTASAHERKG 265 (504)
T ss_pred HhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhC-cchHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 9998751 12345555555444333333445666654321 11223445566777788888888776654332223
Q ss_pred cccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCCCCcCccc
Q 012366 229 DRDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFNRKGKIDETG 308 (465)
Q Consensus 229 ~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~ 308 (465)
..|+++.+++..++. ....++++++.++++++++||+|||+++++|++++|++||++|+|+++|+++++++.+.+++++
T Consensus 266 ~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~ 344 (504)
T PLN00110 266 NPDFLDVVMANQENS-TGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESD 344 (504)
T ss_pred CCChhhHHhhccccc-CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHH
Confidence 569999999764322 1235899999999999999999999999999999999999999999999999998777789999
Q ss_pred cCCChhHHHHHHhhcCCCCCCCCC-CcccCCCceecCeeeCCCCEEEEechhcccCCCCCCCCCCCCCCCCCCCCCCCC-
Q 012366 309 ISEMKYLKLVVKETLRLRPSAPLI-PRECGESCEINGFNIPVKARIIVNSWATGRDPMYWTQPESFIPERFIDHSVDFK- 386 (465)
Q Consensus 309 ~~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~- 386 (465)
+++||||+|||+||+|++|+++.. +|.+.+|++++||.||+||.|.++.+.+|+||++|+||++|+||||++++....
T Consensus 345 ~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~ 424 (504)
T PLN00110 345 LPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKID 424 (504)
T ss_pred hhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccc
Confidence 999999999999999999999985 999999999999999999999999999999999999999999999996532211
Q ss_pred --CCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCCceeEeeccCC
Q 012366 387 --GSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQDLCMIPTPYH 460 (465)
Q Consensus 387 --~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (465)
.+...++|||.|+|.|+|++||.+|+++++|.|+++|++++.++.+ ..+....+++++|+.++.+++++|.
T Consensus 425 ~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~r~ 497 (504)
T PLN00110 425 PRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVE---LNMDEAFGLALQKAVPLSAMVTPRL 497 (504)
T ss_pred cCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCc---cCcccccccccccCCCceEeeccCC
Confidence 1234799999999999999999999999999999999999877643 3333345677888889999999985
No 10
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=6.7e-69 Score=524.75 Aligned_cols=445 Identities=25% Similarity=0.453 Sum_probs=333.6
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCCccccccccc--CCCCchHHHHhhcC---------------------
Q 012366 12 LAFLVFVFILLKLEKTSKTNNTTSNLPPGPRKLPVIGNLHQLV--GSLPHHGLRDLAKK--------------------- 68 (465)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~pPgP~~~p~lG~~~~~~--~~~~~~~~~~~~~~--------------------- 68 (465)
++++++++++++........++..++||||+++|++|+++.+. ..+++.++.+|+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe 90 (519)
T PLN00168 11 ALLLLPLLLLLLGKHGGRGGKKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRR 90 (519)
T ss_pred HHHHHHHHHHhhhhhhccCCCCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHH
Confidence 3334444444455555555656678899999999999998762 23467778888776
Q ss_pred ---------CCc-------cchhhhccCCCceE-eCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHHHHHHHHh-
Q 012366 69 ---------PPV-------LAAKIMSYDNSGII-FSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCNLINWISS- 130 (465)
Q Consensus 69 ---------~~~-------~~~~~~~~~~~~~~-~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~l~~- 130 (465)
... .....+. .+.+++ ++.+|+.|+++||.++.++|+.++++.+.+.+.++++.+++.+.+
T Consensus 91 ~~~~il~~~~~~f~~rp~~~~~~~~~-~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~ 169 (519)
T PLN00168 91 LAHAALVERGAALADRPAVASSRLLG-ESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRRE 169 (519)
T ss_pred HHHHHHHhcCCccccCCcccchhhhc-cCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 000 0001111 111222 236799999999866899999999999999999999999999975
Q ss_pred -CCCCceehhHHHHHHHHHHHhhhhhccCcchHH--HHHHHHHHHHhhh-cccchhhhcccchhhhhhhhhHHHHHHHHH
Q 012366 131 -NEGSVINLTEKVFSLMYGITSRAAFGNKSSEQE--AFVSVMEETTKVI-SGFNIADLFPSFELLQWVTGFRSHAEKLHQ 206 (465)
Q Consensus 131 -~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~ 206 (465)
..++.+|+.+.+..++.++++.++||.+++... .+........... ....+...+|.+... +.....++..+..+
T Consensus 170 ~~~~~~v~~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-~~~~~~~~~~~~~~ 248 (519)
T PLN00168 170 AEDAAAPRVVETFQYAMFCLLVLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKH-LFRGRLQKALALRR 248 (519)
T ss_pred cCCCCCcCHHHHHHHHHHHHHHHHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhh-hhhhHHHHHHHHHH
Confidence 234578999999999999999999999876421 2222222221111 122344556654321 11122344556677
Q ss_pred HHHHHHHHHHHHHHhhhh---c-C-------CCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHH
Q 012366 207 QADRIVESIINDHKKCET---K-N-------ESDRDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDW 275 (465)
Q Consensus 207 ~~~~~~~~~i~~~~~~~~---~-~-------~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~ 275 (465)
.+.+++..+++++++... . + ....|+++.|++...+++....++++++.+++.++++||+|||+++++|
T Consensus 249 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~ 328 (519)
T PLN00168 249 RQKELFVPLIDARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQW 328 (519)
T ss_pred HHHHHHHHHHHHHHHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 888888888877665321 0 0 0145899999986543222235999999999999999999999999999
Q ss_pred HHHHHHhCchHHHHHHHHHHHHhcCC-CCcCccccCCChhHHHHHHhhcCCCCCCCCC-CcccCCCceecCeeeCCCCEE
Q 012366 276 AMCEMMKNPGVMKKAQAEVREVFNRK-GKIDETGISEMKYLKLVVKETLRLRPSAPLI-PRECGESCEINGFNIPVKARI 353 (465)
Q Consensus 276 ~l~~L~~~p~~~~~lr~Ei~~~~~~~-~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~i~g~~ip~gt~v 353 (465)
++++|++||++|+|+++||++++++. +.++.+++.+||||+|||+|++|++|+++.. +|.+.+|++++||.|||||.|
T Consensus 329 ~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v 408 (519)
T PLN00168 329 IMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATV 408 (519)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEE
Confidence 99999999999999999999999754 5689999999999999999999999999887 999999999999999999999
Q ss_pred EEechhcccCCCCCCCCCCCCCCCCCCCCCC----C-CCCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCC
Q 012366 354 IVNSWATGRDPMYWTQPESFIPERFIDHSVD----F-KGSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLP 428 (465)
Q Consensus 354 ~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~----~-~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~ 428 (465)
.++.+.+|+||++|+||++|+||||+++... . ...+..++|||.|+|.|||++||.+|++++++.|+++|+|++.
T Consensus 409 ~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~ 488 (519)
T PLN00168 409 NFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEV 488 (519)
T ss_pred EEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeC
Confidence 9999999999999999999999999974311 0 1224579999999999999999999999999999999999987
Q ss_pred CCCCCCCCCcccccCcccccCCceeEeeccCCC
Q 012366 429 NGMNHEDLEMTETFGVTVRRKQDLCMIPTPYHH 461 (465)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (465)
++.. .+.....+....++.++.++.++|..
T Consensus 489 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~R~~ 518 (519)
T PLN00168 489 PGDE---VDFAEKREFTTVMAKPLRARLVPRRT 518 (519)
T ss_pred CCCc---CChhhhceeEEeecCCcEEEEEeccC
Confidence 7533 23322234445566688888888853
No 11
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=7.5e-69 Score=521.41 Aligned_cols=409 Identities=26% Similarity=0.447 Sum_probs=316.5
Q ss_pred CCCCCCCCCCCCCcccccccccCCCCchHHHHhhcC-----------------------------CC-ccc----hhhh-
Q 012366 33 TTSNLPPGPRKLPVIGNLHQLVGSLPHHGLRDLAKK-----------------------------PP-VLA----AKIM- 77 (465)
Q Consensus 33 ~~~~~pPgP~~~p~lG~~~~~~~~~~~~~~~~~~~~-----------------------------~~-~~~----~~~~- 77 (465)
..++.+|||+++|++||++++ ..+++..+.+++++ .. ... ....
T Consensus 26 ~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~ 104 (482)
T PTZ00404 26 IHKNELKGPIPIPILGNLHQL-GNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIK 104 (482)
T ss_pred ccCCCCCCCCCCCeeccHhhh-cccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceee
Confidence 556789999999999999998 66888999998876 00 000 0000
Q ss_pred -ccCCCceEeCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHHHHHHHHh--CCCCceehhHHHHHHHHHHHhhhh
Q 012366 78 -SYDNSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCNLINWISS--NEGSVINLTEKVFSLMYGITSRAA 154 (465)
Q Consensus 78 -~~~~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~vi~~~~ 154 (465)
...+.| +++.+|+.|+++|+. +.+.|+...++.+.+.+.+.++.+++.|.+ ..++.+|+.+.+.++++|++++++
T Consensus 105 ~~~~~~~-l~~~~g~~w~~~Rk~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~ 182 (482)
T PTZ00404 105 HGTFYHG-IVTSSGEYWKRNREI-VGKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKYI 182 (482)
T ss_pred eeccCCc-eeccChHHHHHHHHH-HHHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHH
Confidence 011344 456689999999999 689999999999999999999999999875 346679999999999999999999
Q ss_pred hccCcchH--------HHHHHHHHHHHhhhcccchhhhcccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 012366 155 FGNKSSEQ--------EAFVSVMEETTKVISGFNIADLFPSFELLQWVTGFRSHAEKLHQQADRIVESIINDHKKCETKN 226 (465)
Q Consensus 155 fG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 226 (465)
||.+++.. ..+.+.+...............++.+... .........+..+.+.+++.+.++++++..+.
T Consensus 183 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 259 (482)
T PTZ00404 183 FNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL--YYQYLEHTDKNFKKIKKFIKEKYHEHLKTIDP- 259 (482)
T ss_pred hccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-
Confidence 99876431 23333344333322222222222221110 00111223445666777777777666553322
Q ss_pred CCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCCCCcCc
Q 012366 227 ESDRDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFNRKGKIDE 306 (465)
Q Consensus 227 ~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~ 306 (465)
....|+++.|+++..+. +....+++++++.++++||+|||+++++|++++|++||++|+|+++||++++++...+++
T Consensus 260 ~~~~dll~~ll~~~~~~---~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~ 336 (482)
T PTZ00404 260 EVPRDLLDLLIKEYGTN---TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLL 336 (482)
T ss_pred CCcccHHHHHHHHhccC---CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCc
Confidence 23579999999875321 112334588999999999999999999999999999999999999999999987667899
Q ss_pred cccCCChhHHHHHHhhcCCCCCCCCC-CcccCCCcee-cCeeeCCCCEEEEechhcccCCCCCCCCCCCCCCCCCCCCCC
Q 012366 307 TGISEMKYLKLVVKETLRLRPSAPLI-PRECGESCEI-NGFNIPVKARIIVNSWATGRDPMYWTQPESFIPERFIDHSVD 384 (465)
Q Consensus 307 ~~~~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~i-~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~ 384 (465)
+++++||||+|||+|+||++|+++.. +|.+.+|+++ +|+.||+||.|.++.+++|+||++|+||++|+||||+++.
T Consensus 337 ~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~-- 414 (482)
T PTZ00404 337 SDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD-- 414 (482)
T ss_pred cccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC--
Confidence 99999999999999999999999985 9999999999 9999999999999999999999999999999999998642
Q ss_pred CCCCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCCceeEeeccC
Q 012366 385 FKGSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQDLCMIPTPY 459 (465)
Q Consensus 385 ~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (465)
.+..++|||.|+|.|||++||.+|++++++.|+++|++++.++.+ +......+++++ +.++.|++++|
T Consensus 415 ---~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~~-~~~~~v~~~~R 482 (482)
T PTZ00404 415 ---SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKK---IDETEEYGLTLK-PNKFKVLLEKR 482 (482)
T ss_pred ---CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCC---CCcccccceeec-CCCceeeeecC
Confidence 345899999999999999999999999999999999999876543 222234566666 55889988876
No 12
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=3.6e-69 Score=527.70 Aligned_cols=368 Identities=21% Similarity=0.386 Sum_probs=296.8
Q ss_pred CCceEeCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHHHHHHHHh---CCCCceehhHHHHHHHHHHHhhhhhcc
Q 012366 81 NSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCNLINWISS---NEGSVINLTEKVFSLMYGITSRAAFGN 157 (465)
Q Consensus 81 ~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~vd~~~~~~~~~~~vi~~~~fG~ 157 (465)
+.++ +..+|+.|+++|+. +.+.|+..+++.+.+.+.++++.+++.+.+ .++.++|+.+.+..+++|++++++||.
T Consensus 141 g~~l-~~~~g~~Wk~~Rk~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~ 218 (516)
T PLN02290 141 GRGL-LMANGADWYHQRHI-AAPAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEVEIGEYMTRLTADIISRTEFDS 218 (516)
T ss_pred cCCc-cccCchHHHHHHhh-cccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEhHHHHHHHHHHHHHHHHcCC
Confidence 3444 55679999999999 689999999999999999999999999975 223589999999999999999999999
Q ss_pred CcchHHHHHHHHHHHHhhhcccchhhhcccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcC---CCcccHHH
Q 012366 158 KSSEQEAFVSVMEETTKVISGFNIADLFPSFELLQWVTGFRSHAEKLHQQADRIVESIINDHKKCETKN---ESDRDLVD 234 (465)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~d~l~ 234 (465)
+++..+++.+.+..+............+|.+.++. .+..++.....+.+.+++.+.++++++..+.+ ....|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~ 296 (516)
T PLN02290 219 SYEKGKQIFHLLTVLQRLCAQATRHLCFPGSRFFP--SKYNREIKSLKGEVERLLMEIIQSRRDCVEIGRSSSYGDDLLG 296 (516)
T ss_pred ccccchHHHHHHHHHHHHHHHhhhhhcCchhhhCC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHH
Confidence 87655444444444433222111122234333221 12234455667788888888888876543221 23579999
Q ss_pred HHHHhhhcC-CCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCCCCcCccccCCCh
Q 012366 235 VLLKIQEDG-NLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFNRKGKIDETGISEMK 313 (465)
Q Consensus 235 ~ll~~~~~~-~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~lp 313 (465)
.++++..+. +.+..++++++.+++.++++||+|||+++++|++++|++||++|+|+|+||+++++++ .++++++++||
T Consensus 297 ~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lp 375 (516)
T PLN02290 297 MLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLT 375 (516)
T ss_pred HHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcCh
Confidence 999865432 1123478899999999999999999999999999999999999999999999999865 78999999999
Q ss_pred hHHHHHHhhcCCCCCCCCCCcccCCCceecCeeeCCCCEEEEechhcccCCCCC-CCCCCCCCCCCCCCCCCCCCCCccc
Q 012366 314 YLKLVVKETLRLRPSAPLIPRECGESCEINGFNIPVKARIIVNSWATGRDPMYW-TQPESFIPERFIDHSVDFKGSNFEY 392 (465)
Q Consensus 314 ~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~-~~p~~F~P~R~~~~~~~~~~~~~~~ 392 (465)
||+|||+||||++|+++..+|.+.+|++++|+.||+||.|.++.+.+|+||++| +||++|+||||+++.. .....+
T Consensus 376 Yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~---~~~~~~ 452 (516)
T PLN02290 376 LLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF---APGRHF 452 (516)
T ss_pred HHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC---CCCCeE
Confidence 999999999999999998899999999999999999999999999999999999 8999999999995431 123479
Q ss_pred ccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCCceeEeeccCCC
Q 012366 393 IPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQDLCMIPTPYHH 461 (465)
Q Consensus 393 ~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (465)
+|||.|+|.|+|+.||++|++++++.|+++|++++.++.. .....++++.|++++.+++++|.+
T Consensus 453 ~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~-----~~~~~~~~~~p~~~~~~~~~~~~~ 516 (516)
T PLN02290 453 IPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR-----HAPVVVLTIKPKYGVQVCLKPLNP 516 (516)
T ss_pred ecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc-----cCccceeeecCCCCCeEEEEeCCC
Confidence 9999999999999999999999999999999999877632 111235678899999999998864
No 13
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00 E-value=2.8e-69 Score=519.38 Aligned_cols=411 Identities=27% Similarity=0.485 Sum_probs=319.2
Q ss_pred CCCCCCCCCCCCcccccccccCC--CCchHHHHhhcC----------------------------------CCccc-h-h
Q 012366 34 TSNLPPGPRKLPVIGNLHQLVGS--LPHHGLRDLAKK----------------------------------PPVLA-A-K 75 (465)
Q Consensus 34 ~~~~pPgP~~~p~lG~~~~~~~~--~~~~~~~~~~~~----------------------------------~~~~~-~-~ 75 (465)
..+.||||.++|++|+.+++... ....++.++..+ ++... . .
T Consensus 33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~ 112 (497)
T KOG0157|consen 33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES 112 (497)
T ss_pred HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence 55689999999999999998433 344444554332 00000 0 1
Q ss_pred hhccCCCceEeCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHHHHHHHHh-CCCCceehhHHHHHHHHHHHhhhh
Q 012366 76 IMSYDNSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCNLINWISS-NEGSVINLTEKVFSLMYGITSRAA 154 (465)
Q Consensus 76 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~vd~~~~~~~~~~~vi~~~~ 154 (465)
.....|.|++++. |+.|+.+||+ +.++|+...++.+...+.+.+..+...+.. ..++.+|+.+.++++++|++|.++
T Consensus 113 ~~~~lG~gll~~~-g~~W~~~Rk~-~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~~~ 190 (497)
T KOG0157|consen 113 LKPWLGDGLLFSD-GEKWHKHRKL-LTPAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICKTA 190 (497)
T ss_pred HHHHhcCccccCC-chHHHHHHhh-ccHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHHHh
Confidence 1122356777666 9999999999 699999999999999999988888777765 233339999999999999999999
Q ss_pred hccCc-c-hH---HHHHHHHHHHHhhhcccchhhhcc-cchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcC--
Q 012366 155 FGNKS-S-EQ---EAFVSVMEETTKVISGFNIADLFP-SFELLQWVTGFRSHAEKLHQQADRIVESIINDHKKCETKN-- 226 (465)
Q Consensus 155 fG~~~-~-~~---~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-- 226 (465)
||... + .. .++...+......+ ......| +..+.... +..++..++.+.+.++++++|+++++....+
T Consensus 191 ~G~~~~~~~~~~~~~~~~a~~~~~~~~---~~~~~~p~~~~~~~~~-~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~ 266 (497)
T KOG0157|consen 191 MGPESLDAEGPELFEYVQAFDDLTELI---SKRINLPLGTKFLYGL-KSERKLKKARKILHDFLEKIIRERREELEKEGS 266 (497)
T ss_pred cCCccccccCCcccHHHHHHHHHHHHH---HHHHcCchhhhHHhhc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99222 2 11 13444444333332 2333445 22222112 2457888999999999999999888754322
Q ss_pred ---CCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCCCC
Q 012366 227 ---ESDRDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFNRKGK 303 (465)
Q Consensus 227 ---~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~ 303 (465)
....|+++.+....+ ..++++++++.+.++++||+||||++++|++++|+.||++|+|+++|+++++++...
T Consensus 267 ~~~~~~~d~L~~~~~~~~-----~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~ 341 (497)
T KOG0157|consen 267 GEEKKRLDFLDTLLLEED-----KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDD 341 (497)
T ss_pred cccchhhhHHHHHHHhcc-----CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCC
Confidence 234677775322222 358999999999999999999999999999999999999999999999999985433
Q ss_pred -cCccccCCChhHHHHHHhhcCCCCCCCCCCcccCCCcee-cCeeeCCCCEEEEechhcccCCCCCC-CCCCCCCCCCCC
Q 012366 304 -IDETGISEMKYLKLVVKETLRLRPSAPLIPRECGESCEI-NGFNIPVKARIIVNSWATGRDPMYWT-QPESFIPERFID 380 (465)
Q Consensus 304 -~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~i-~g~~ip~gt~v~~~~~~~~~d~~~~~-~p~~F~P~R~~~ 380 (465)
++..+.++|+||++||+|||||||++|...|.+.+|+++ +|+.||||+.|.++++++|||+++|+ ||++||||||.+
T Consensus 342 ~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~ 421 (497)
T KOG0157|consen 342 KWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLD 421 (497)
T ss_pred CCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCC
Confidence 233333369999999999999999999999999999999 58999999999999999999999996 999999999997
Q ss_pred CCCCCCCCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCCceeEeeccCC
Q 012366 381 HSVDFKGSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQDLCMIPTPYH 460 (465)
Q Consensus 381 ~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (465)
+......+++.|+|||+|+|.|+|++||++|+|+++++|+++|++++..+.. ......++++++.+++|++++|.
T Consensus 422 ~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-----~~~~~~~~l~~~~gl~v~~~~r~ 496 (497)
T KOG0157|consen 422 GEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-----PKPVPELTLRPKNGLKVKLRPRG 496 (497)
T ss_pred CCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-----ceeeeEEEEEecCCeEEEEEeCC
Confidence 5433244578999999999999999999999999999999999999887642 34567888899999999999985
No 14
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=1e-67 Score=516.24 Aligned_cols=419 Identities=27% Similarity=0.562 Sum_probs=309.7
Q ss_pred CCCCCCCCCCCCCcccccccccCCCCchHHHHhhcC----------------------------C---------Cccchh
Q 012366 33 TTSNLPPGPRKLPVIGNLHQLVGSLPHHGLRDLAKK----------------------------P---------PVLAAK 75 (465)
Q Consensus 33 ~~~~~pPgP~~~p~lG~~~~~~~~~~~~~~~~~~~~----------------------------~---------~~~~~~ 75 (465)
++.+.||||+++|++|+++++.....+..+.+|+++ . .....+
T Consensus 27 ~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~ 106 (503)
T PLN02394 27 KKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFD 106 (503)
T ss_pred CcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHh
Confidence 446789999999999999888333356788888887 0 000111
Q ss_pred hhccCCCceEeCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHHHHHHHHhC---CCCceehhHHHHHHHHHHHhh
Q 012366 76 IMSYDNSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCNLINWISSN---EGSVINLTEKVFSLMYGITSR 152 (465)
Q Consensus 76 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~vd~~~~~~~~~~~vi~~ 152 (465)
.+...+.+.+++.+|+.|+++||.+..++|+.+.++.+.+.++++++.+++.+.+. .++.+|+.+.+..+++|++++
T Consensus 107 ~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~ 186 (503)
T PLN02394 107 IFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYR 186 (503)
T ss_pred HhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHH
Confidence 12112334677888999999999965699999999999999999999999998752 245699999999999999999
Q ss_pred hhhccCcchHH--HHH---HHHHHHHhhhcc--cchhhhcccchhhhhhhhhHHHHHHHHHHHHH-HHHHHHHHHHhhhh
Q 012366 153 AAFGNKSSEQE--AFV---SVMEETTKVISG--FNIADLFPSFELLQWVTGFRSHAEKLHQQADR-IVESIINDHKKCET 224 (465)
Q Consensus 153 ~~fG~~~~~~~--~~~---~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~ 224 (465)
++||.+++..+ .+. ............ ..+...+|++... .....+........... +...+++++.+..+
T Consensus 187 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 264 (503)
T PLN02394 187 MMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF--LRGYLKICQDVKERRLALFKDYFVDERKKLMS 264 (503)
T ss_pred HHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999875422 111 111111111111 1122334433211 11111112222222222 33334555443211
Q ss_pred ----cCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcC
Q 012366 225 ----KNESDRDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFNR 300 (465)
Q Consensus 225 ----~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~ 300 (465)
......|+++.|+++.+++ .++++++...+.++++||+|||+++++|++++|++||++|+|||+||+++++.
T Consensus 265 ~~~~~~~~~~d~l~~ll~~~~~~----~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~ 340 (503)
T PLN02394 265 AKGMDKEGLKCAIDHILEAQKKG----EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGP 340 (503)
T ss_pred hccCCcchhhhHHHHHHhccccC----CCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC
Confidence 1123478999999876543 38899999999999999999999999999999999999999999999999987
Q ss_pred CCCcCccccCCChhHHHHHHhhcCCCCCCCCC-CcccCCCceecCeeeCCCCEEEEechhcccCCCCCCCCCCCCCCCCC
Q 012366 301 KGKIDETGISEMKYLKLVVKETLRLRPSAPLI-PRECGESCEINGFNIPVKARIIVNSWATGRDPMYWTQPESFIPERFI 379 (465)
Q Consensus 301 ~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~~ 379 (465)
++.++++++++||||+|||+|+||++|+++.. +|.+.+|.+++||.||+||.|.++.+.+|+||++|+||++|+||||+
T Consensus 341 ~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl 420 (503)
T PLN02394 341 GNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFL 420 (503)
T ss_pred CCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccC
Confidence 66789999999999999999999999999998 89999999999999999999999999999999999999999999999
Q ss_pred CCCCC--CCCCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccC-cccccCCceeEee
Q 012366 380 DHSVD--FKGSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFG-VTVRRKQDLCMIP 456 (465)
Q Consensus 380 ~~~~~--~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 456 (465)
+++.+ .......++|||+|+|+|+|++||.+|+++++|.|+++|++++.++.+ +++.....+ .....+.++.++.
T Consensus 421 ~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 498 (503)
T PLN02394 421 EEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQS--KIDVSEKGGQFSLHIAKHSTVVF 498 (503)
T ss_pred CCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCC--cCccccccCceeeccCCCceEEe
Confidence 65422 122356799999999999999999999999999999999999877642 234433332 2222222667777
Q ss_pred ccC
Q 012366 457 TPY 459 (465)
Q Consensus 457 ~~~ 459 (465)
.||
T Consensus 499 ~~r 501 (503)
T PLN02394 499 KPR 501 (503)
T ss_pred ecC
Confidence 666
No 15
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=5.7e-68 Score=515.45 Aligned_cols=400 Identities=19% Similarity=0.292 Sum_probs=301.9
Q ss_pred CCCCCCCCCCCCCCcccccccccC----CCCchHHHHhhcC----------------------------CC--ccch---
Q 012366 32 NTTSNLPPGPRKLPVIGNLHQLVG----SLPHHGLRDLAKK----------------------------PP--VLAA--- 74 (465)
Q Consensus 32 ~~~~~~pPgP~~~p~lG~~~~~~~----~~~~~~~~~~~~~----------------------------~~--~~~~--- 74 (465)
+++.+.||||+++|++||++.+.. ++.+.++.+++++ .. ....
T Consensus 34 ~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~ 113 (490)
T PLN02500 34 QKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP 113 (490)
T ss_pred cCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence 455678999999999999875422 3455667777665 00 0000
Q ss_pred hhh-ccCCCceEeCCCChhHHHHHhhhhhccCcHHHHHH-hHHHHHHHHHHHHHHHHhCCCCceehhHHHHHHHHHHHhh
Q 012366 75 KIM-SYDNSGIIFSPYGDCWRQLRKICVSELLSAKRVQS-FRSIREAEVCNLINWISSNEGSVINLTEKVFSLMYGITSR 152 (465)
Q Consensus 75 ~~~-~~~~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~ 152 (465)
... ...+.+.++..+|+.|+.+|+.+ .+.|+..+++. +.+.+.+.+..+++.+. .++.+|+.+.+.++++|++++
T Consensus 114 ~~~~~~~g~~~~~~~~g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~vd~~~~~~~~~~~vi~~ 190 (490)
T PLN02500 114 RSIGGILGKWSMLVLVGDMHRDMRSIS-LNFLSHARLRTHLLKEVERHTLLVLDSWK--ENSTFSAQDEAKKFTFNLMAK 190 (490)
T ss_pred hHHHHHhCcccccccCCHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhC--CCCCEEehHHHHHHHHHHHHH
Confidence 000 01122233445799999999994 78899988887 57788888888888774 346799999999999999999
Q ss_pred hhhccCcchH--HHHHHHHHHHHhhhcccchhhhcccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcC---C
Q 012366 153 AAFGNKSSEQ--EAFVSVMEETTKVISGFNIADLFPSFELLQWVTGFRSHAEKLHQQADRIVESIINDHKKCETKN---E 227 (465)
Q Consensus 153 ~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~ 227 (465)
++||.+.+.. +++...+.+....... ....+|... .++..++.+.+.+++.++++++++..+.+ .
T Consensus 191 ~~fg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~--------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 260 (490)
T PLN02500 191 HIMSMDPGEEETEQLKKEYVTFMKGVVS--APLNFPGTA--------YRKALKSRATILKFIERKMEERIEKLKEEDESV 260 (490)
T ss_pred HHhCCCCCchHHHHHHHHHHHHHhhhhc--chhcCCCcc--------cHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCC
Confidence 9999876432 2222222222221110 111123211 13344566777888888887766533221 1
Q ss_pred CcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhc-----CCC
Q 012366 228 SDRDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFN-----RKG 302 (465)
Q Consensus 228 ~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~-----~~~ 302 (465)
...|+++.+++.. .++++++++++.++++||+|||+++++|++++|++||++|+|+|+||+++++ +..
T Consensus 261 ~~~d~l~~ll~~~-------~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~ 333 (490)
T PLN02500 261 EEDDLLGWVLKHS-------NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGES 333 (490)
T ss_pred CcchHHHHHHhcc-------CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCC
Confidence 3568999998731 3889999999999999999999999999999999999999999999999864 234
Q ss_pred CcCccccCCChhHHHHHHhhcCCCCCCCCCCcccCCCceecCeeeCCCCEEEEechhcccCCCCCCCCCCCCCCCCCCCC
Q 012366 303 KIDETGISEMKYLKLVVKETLRLRPSAPLIPRECGESCEINGFNIPVKARIIVNSWATGRDPMYWTQPESFIPERFIDHS 382 (465)
Q Consensus 303 ~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~ 382 (465)
.++.+|+++||||+|||+|++|++|+++..+|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||++++
T Consensus 334 ~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~ 413 (490)
T PLN02500 334 ELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNN 413 (490)
T ss_pred CCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCC
Confidence 58899999999999999999999999999899999999999999999999999999999999999999999999999654
Q ss_pred CCCC------CCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCCceeEee
Q 012366 383 VDFK------GSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQDLCMIP 456 (465)
Q Consensus 383 ~~~~------~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (465)
.+.. ..+..++|||.|+|.|+|+++|.+|++++++.|+++|+|++.++... .. ... +.++.++.|++
T Consensus 414 ~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~----~~--~~~-~~~~~~l~~~~ 486 (490)
T PLN02500 414 NRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQA----FA--FPF-VDFPKGLPIRV 486 (490)
T ss_pred cccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcc----ee--ccc-ccCCCCceEEE
Confidence 2111 13567999999999999999999999999999999999998775431 11 122 23446888887
Q ss_pred cc
Q 012366 457 TP 458 (465)
Q Consensus 457 ~~ 458 (465)
++
T Consensus 487 ~~ 488 (490)
T PLN02500 487 RR 488 (490)
T ss_pred Ee
Confidence 64
No 16
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=3.2e-67 Score=506.48 Aligned_cols=410 Identities=25% Similarity=0.462 Sum_probs=320.7
Q ss_pred CCCCCCCCcccccccccCCCCchHHHHhhcC------------------------------C----Cc---cchhhhccC
Q 012366 38 PPGPRKLPVIGNLHQLVGSLPHHGLRDLAKK------------------------------P----PV---LAAKIMSYD 80 (465)
Q Consensus 38 pPgP~~~p~lG~~~~~~~~~~~~~~~~~~~~------------------------------~----~~---~~~~~~~~~ 80 (465)
||||+++|++||++++..++++.++.+|+++ . .. .....+..+
T Consensus 1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~ 80 (466)
T PLN02655 1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD 80 (466)
T ss_pred CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence 7899999999999998555688999999887 0 00 001112111
Q ss_pred CCceEeCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHHHHHHHHh----CCCCceehhHHHHHHHHHHHhhhhhc
Q 012366 81 NSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCNLINWISS----NEGSVINLTEKVFSLMYGITSRAAFG 156 (465)
Q Consensus 81 ~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~vd~~~~~~~~~~~vi~~~~fG 156 (465)
+..+++..+|+.|+.+||.+..++++...++.+.+.+++.++.+++.+.+ ..++++|+.+.+.++++|+++.++||
T Consensus 81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG 160 (466)
T PLN02655 81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG 160 (466)
T ss_pred CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence 22244445699999999987888999888899999888888888887753 24678999999999999999999999
Q ss_pred cCcchH------------HHHHHHHHHHHhhhcccchhhhcccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 012366 157 NKSSEQ------------EAFVSVMEETTKVISGFNIADLFPSFELLQWVTGFRSHAEKLHQQADRIVESIINDHKKCET 224 (465)
Q Consensus 157 ~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 224 (465)
.+++.. +.+...+..+........+.+.+|.++++.+ ....+........+.+++..+++++++...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 239 (466)
T PLN02655 161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPN-KSFETRVQTTEFRRTAVMKALIKQQKKRIA 239 (466)
T ss_pred cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 876531 1122223333333322334456776554321 112233333344556777788777665433
Q ss_pred cCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCCCCc
Q 012366 225 KNESDRDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFNRKGKI 304 (465)
Q Consensus 225 ~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~ 304 (465)
.+.+..|+++.+++... .++++++.+++.++++||+|||+++++|++++|++||++|+++|+||++++++.. +
T Consensus 240 ~~~~~~d~l~~ll~~~~------~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~ 312 (466)
T PLN02655 240 RGEERDCYLDFLLSEAT------HLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-V 312 (466)
T ss_pred CCCCcccHHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-C
Confidence 33335689999997642 3899999999999999999999999999999999999999999999999998654 8
Q ss_pred CccccCCChhHHHHHHhhcCCCCCCCCC-CcccCCCceecCeeeCCCCEEEEechhcccCCCCCCCCCCCCCCCCCCCCC
Q 012366 305 DETGISEMKYLKLVVKETLRLRPSAPLI-PRECGESCEINGFNIPVKARIIVNSWATGRDPMYWTQPESFIPERFIDHSV 383 (465)
Q Consensus 305 ~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~ 383 (465)
+.++++++|||+|||+|+||++|+++.. +|.+.+|++++|+.|||||.|.++.+++|+||++|+||++|+||||+++..
T Consensus 313 ~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~ 392 (466)
T PLN02655 313 TEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKY 392 (466)
T ss_pred CHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCc
Confidence 9999999999999999999999999998 899999999999999999999999999999999999999999999997542
Q ss_pred CCCCCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCCceeEeeccCC
Q 012366 384 DFKGSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQDLCMIPTPYH 460 (465)
Q Consensus 384 ~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (465)
+ ......++|||+|+|.|||++||..+++++++.||++|++++.++... + ....+++..++.++.++.++|.
T Consensus 393 ~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~r~ 464 (466)
T PLN02655 393 E-SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEE-K---EDTVQLTTQKLHPLHAHLKPRG 464 (466)
T ss_pred c-cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCcc-c---cchhheeEeecCCcEEEEeecC
Confidence 2 123467999999999999999999999999999999999998766431 1 2235666778889999988775
No 17
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=1.5e-65 Score=498.47 Aligned_cols=424 Identities=25% Similarity=0.463 Sum_probs=311.0
Q ss_pred CCCCCCCCCCCCCCCcccccccccCCCC-----chHHHHhhcC----------------------------------CCc
Q 012366 31 NNTTSNLPPGPRKLPVIGNLHQLVGSLP-----HHGLRDLAKK----------------------------------PPV 71 (465)
Q Consensus 31 ~~~~~~~pPgP~~~p~lG~~~~~~~~~~-----~~~~~~~~~~----------------------------------~~~ 71 (465)
.+...+.||||+++|++||++++..+++ +..+.+++.. +..
T Consensus 35 ~~~~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~ 114 (534)
T PLN03018 35 KDRSRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQL 114 (534)
T ss_pred CCCCCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCc
Confidence 3344457999999999999999743222 3444444322 001
Q ss_pred cchhhhccCCCceEeCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHHHHHHHHh--CCCCceehhHHHHHHHHHH
Q 012366 72 LAAKIMSYDNSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCNLINWISS--NEGSVINLTEKVFSLMYGI 149 (465)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~v 149 (465)
.....+..++.+++++.+|+.|+.+|+.+...+++......+.+.++.+++.+++.+.+ ..++++|+.+.+.++++|+
T Consensus 115 ~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~v 194 (534)
T PLN03018 115 SIMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAV 194 (534)
T ss_pred hhhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHH
Confidence 11111211123466666799999999995443445555556666667788999998875 3456799999999999999
Q ss_pred HhhhhhccCcch-------HHH----HHHHHHHHHhhhc---ccchhhhcc-cchhhhhh-hhhHHHHHHHHHHHHHHHH
Q 012366 150 TSRAAFGNKSSE-------QEA----FVSVMEETTKVIS---GFNIADLFP-SFELLQWV-TGFRSHAEKLHQQADRIVE 213 (465)
Q Consensus 150 i~~~~fG~~~~~-------~~~----~~~~~~~~~~~~~---~~~~~~~~P-~l~~~~~~-~~~~~~~~~~~~~~~~~~~ 213 (465)
+++++||.++.. +.. +............ .....+.+| ++.+ +. .+...+.....+.+.+++.
T Consensus 195 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~ 272 (534)
T PLN03018 195 TMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRG--WNIDGQEERAKVNVNLVRSYNN 272 (534)
T ss_pred HHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhh--hcccchHHHHHHHHHHHHHHHH
Confidence 999999987632 111 1111222221111 111222233 2211 11 1223344455667788888
Q ss_pred HHHHHHHhhhh--cC-CCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHH
Q 012366 214 SIINDHKKCET--KN-ESDRDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKA 290 (465)
Q Consensus 214 ~~i~~~~~~~~--~~-~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 290 (465)
++++++++... .+ ....|+++.|++..++.+ ...++++++++++.++++||+|||+++++|++++|++||++|+|+
T Consensus 273 ~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl 351 (534)
T PLN03018 273 PIIDERVELWREKGGKAAVEDWLDTFITLKDQNG-KYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKA 351 (534)
T ss_pred HHHHHHHHHhhhccCCCCcccHHHHHHHhhcccC-CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHH
Confidence 88887765322 11 124699999998654322 113899999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcCccccCCChhHHHHHHhhcCCCCCCCCC-CcccCCCceecCeeeCCCCEEEEechhcccCCCCCCC
Q 012366 291 QAEVREVFNRKGKIDETGISEMKYLKLVVKETLRLRPSAPLI-PRECGESCEINGFNIPVKARIIVNSWATGRDPMYWTQ 369 (465)
Q Consensus 291 r~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~ 369 (465)
++||+++++.++.++.+++.+||||+|||+|+||++|+++.. +|++.+|++++|+.|||||.|.++.+.+|+||++|+|
T Consensus 352 ~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~ 431 (534)
T PLN03018 352 LKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKD 431 (534)
T ss_pred HHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCC
Confidence 999999998777889999999999999999999999999998 8999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCC-----CCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCc
Q 012366 370 PESFIPERFIDHSVDFK-----GSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGV 444 (465)
Q Consensus 370 p~~F~P~R~~~~~~~~~-----~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 444 (465)
|++|+||||++++.+.+ ..+..++|||+|+|.|||+++|.+|+++++++|+++|++++.++.. ++++....++
T Consensus 432 p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~ 509 (534)
T PLN03018 432 PLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFG--PLSLEEDDAS 509 (534)
T ss_pred ccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCC--CCCccccccc
Confidence 99999999996542111 2346799999999999999999999999999999999999876532 2334333354
Q ss_pred ccccCCceeEeeccCC
Q 012366 445 TVRRKQDLCMIPTPYH 460 (465)
Q Consensus 445 ~~~~~~~~~~~~~~~~ 460 (465)
... +.++.+++++|.
T Consensus 510 ~~~-p~~~~v~~~~R~ 524 (534)
T PLN03018 510 LLM-AKPLLLSVEPRL 524 (534)
T ss_pred eec-CCCeEEEEEecc
Confidence 444 459999999984
No 18
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00 E-value=1e-66 Score=502.65 Aligned_cols=394 Identities=20% Similarity=0.307 Sum_probs=306.2
Q ss_pred CCCCCCCCCCCcccccccccCCCCchHHHHhhcC------------------------------CCc----cchhhhccC
Q 012366 35 SNLPPGPRKLPVIGNLHQLVGSLPHHGLRDLAKK------------------------------PPV----LAAKIMSYD 80 (465)
Q Consensus 35 ~~~pPgP~~~p~lG~~~~~~~~~~~~~~~~~~~~------------------------------~~~----~~~~~~~~~ 80 (465)
++.||||+++|++||.+.+ .++++.++.+++++ ... .........
T Consensus 30 ~~~ppgp~~~P~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~l 108 (463)
T PLN02774 30 KGLPPGTMGWPLFGETTEF-LKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLDIL 108 (463)
T ss_pred CCCCCCCCCCCchhhHHHH-HHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHHHh
Confidence 4679999999999999888 66778888888765 000 000001111
Q ss_pred CCceEeCCCChhHHHHHhhhhhccCcHHHHHH-hHHHHHHHHHHHHHHHHhCCCCceehhHHHHHHHHHHHhhhhhccCc
Q 012366 81 NSGIIFSPYGDCWRQLRKICVSELLSAKRVQS-FRSIREAEVCNLINWISSNEGSVINLTEKVFSLMYGITSRAAFGNKS 159 (465)
Q Consensus 81 ~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~ 159 (465)
+.+.+++.+|+.|+.+|+.+ .++|++..++. +.+.+.+.++++++.+. .++++|+.+.+..+++++++.++||...
T Consensus 109 g~~~~~~~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~g~~~ 185 (463)
T PLN02774 109 GTCNIAAVHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWD--GLKTIDIQEKTKEMALLSALKQIAGTLS 185 (463)
T ss_pred CccchhhcCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhC--CCCCEEeeHHHHHHHHHHHHHHHcCCCC
Confidence 23334556799999999995 78999988876 78999998999888874 3467999999999999999999999865
Q ss_pred chHHHHHHHHHHHHhhhccc-chhhhcccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcccHHHHHHH
Q 012366 160 SEQEAFVSVMEETTKVISGF-NIADLFPSFELLQWVTGFRSHAEKLHQQADRIVESIINDHKKCETKNESDRDLVDVLLK 238 (465)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~-~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~ 238 (465)
+... .+....+....... .+...+|. ...++..++.+.+.+++.+.++++.+.. ...+|+++.+++
T Consensus 186 ~~~~--~~~~~~~~~~~~~~~~~~~~lp~--------~~~~~~~~~~~~~~~~~~~~i~~r~~~~---~~~~d~l~~ll~ 252 (463)
T PLN02774 186 KPIS--EEFKTEFFKLVLGTLSLPIDLPG--------TNYRSGVQARKNIVRMLRQLIQERRASG---ETHTDMLGYLMR 252 (463)
T ss_pred hHHH--HHHHHHHHHHhcccccCCcCCCC--------hhhhHHHHHHHHHHHHHHHHHHHHHhcC---CCcccHHHHHHh
Confidence 4321 11222222221111 11111121 1124455677888888888888776532 335799999997
Q ss_pred hhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcC---CCCcCccccCCChhH
Q 012366 239 IQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFNR---KGKIDETGISEMKYL 315 (465)
Q Consensus 239 ~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~---~~~~~~~~~~~lp~l 315 (465)
...++ ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+. ++.+++++++++|||
T Consensus 253 ~~~~~---~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl 329 (463)
T PLN02774 253 KEGNR---YKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFT 329 (463)
T ss_pred CccCC---CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHH
Confidence 43221 248999999999999999999999999999999999999999999999999863 346789999999999
Q ss_pred HHHHHhhcCCCCCCCCCCcccCCCceecCeeeCCCCEEEEechhcccCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccC
Q 012366 316 KLVVKETLRLRPSAPLIPRECGESCEINGFNIPVKARIIVNSWATGRDPMYWTQPESFIPERFIDHSVDFKGSNFEYIPF 395 (465)
Q Consensus 316 ~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~~~~~~~~F 395 (465)
+|||+|+||++|+++...|.+.+|++++|+.|||||.|.++.+.+|+||++|+||++|+||||++++.. ....++||
T Consensus 330 ~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~---~~~~~lpF 406 (463)
T PLN02774 330 RAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLE---SHNYFFLF 406 (463)
T ss_pred HHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcC---CCccccCc
Confidence 999999999999999889999999999999999999999999999999999999999999999965421 12369999
Q ss_pred CCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCCceeEeecc
Q 012366 396 GAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQDLCMIPTP 458 (465)
Q Consensus 396 g~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (465)
|+|+|.|||+++|.+|++++++.|+++|++++.++..+. . +. .+.|+.++.|+++|
T Consensus 407 G~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~-----~-~~-~~~p~~g~~~~~~~ 462 (463)
T PLN02774 407 GGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLM-----K-FP-RVEAPNGLHIRVSP 462 (463)
T ss_pred CCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCccc-----c-CC-CCCCCCCceEEeee
Confidence 999999999999999999999999999999997764311 1 11 23367899999885
No 19
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00 E-value=2.7e-66 Score=502.00 Aligned_cols=363 Identities=20% Similarity=0.396 Sum_probs=283.8
Q ss_pred CCceEeCCCChhHHHHHhhhhhccCcHHHHHHh--HHHHHHHHHHHHHHHHh--CCCCceehhHHHHHHHHHHHhhhhhc
Q 012366 81 NSGIIFSPYGDCWRQLRKICVSELLSAKRVQSF--RSIREAEVCNLINWISS--NEGSVINLTEKVFSLMYGITSRAAFG 156 (465)
Q Consensus 81 ~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~--~~~~~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~vi~~~~fG 156 (465)
|.|++ ..+|+.|+.+||. +.++|+...++.+ .+.+++.++.+++.+.+ .+++++|+.+.+.++++|++++++||
T Consensus 116 g~gl~-~~~g~~Wr~~Rk~-l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG 193 (500)
T PLN02169 116 GEGIL-TVDFELWEDLRKS-NHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSSILMTG 193 (500)
T ss_pred cCccc-ccCcHHHHHHHHH-HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHHhheeC
Confidence 55554 5569999999999 5899998877643 46677788888888764 35678999999999999999999999
Q ss_pred cCcchH------HHHHHHHHHHHhhhcccchhhhcccchh--hhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHhhhh-c-
Q 012366 157 NKSSEQ------EAFVSVMEETTKVISGFNIADLFPSFEL--LQWV-TGFRSHAEKLHQQADRIVESIINDHKKCET-K- 225 (465)
Q Consensus 157 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~P~l~~--~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~- 225 (465)
.+.+.. .++...+....... ......|++.+ ..++ .+..++..++.+.+.+++.++|+++++... .
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~ 270 (500)
T PLN02169 194 YDPMSLSIEMLEVEFGEAADIGEEAI---YYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEISRA 270 (500)
T ss_pred CCccccCCCCCCCHHHHHHHHHHHHH---HhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 876421 23444433333221 11122343221 1222 233466778888999999999988765421 1
Q ss_pred --CCCcccHHHHHHHhhhcC-CCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCCC
Q 012366 226 --NESDRDLVDVLLKIQEDG-NLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFNRKG 302 (465)
Q Consensus 226 --~~~~~d~l~~ll~~~~~~-~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~ 302 (465)
+...+|+++.+++...++ .....++++++.+++.++++||+|||+++++|++++|++||++|+|+++||++++
T Consensus 271 ~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~---- 346 (500)
T PLN02169 271 ETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF---- 346 (500)
T ss_pred cccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC----
Confidence 112468999999864321 1112478889999999999999999999999999999999999999999999873
Q ss_pred CcCccccCCChhHHHHHHhhcCCCCCCCCCCcccCCCce-ecCeeeCCCCEEEEechhcccCCCCC-CCCCCCCCCCCCC
Q 012366 303 KIDETGISEMKYLKLVVKETLRLRPSAPLIPRECGESCE-INGFNIPVKARIIVNSWATGRDPMYW-TQPESFIPERFID 380 (465)
Q Consensus 303 ~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~-i~g~~ip~gt~v~~~~~~~~~d~~~~-~~p~~F~P~R~~~ 380 (465)
+.+++.+||||+|||+||||++|++|...|.+.+|.+ ++|+.|||||.|.++++++||||++| +||++|+||||++
T Consensus 347 --~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~ 424 (500)
T PLN02169 347 --DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWIS 424 (500)
T ss_pred --CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCC
Confidence 5789999999999999999999999999777766655 59999999999999999999999999 8999999999997
Q ss_pred CCCCCC-CCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCCceeEeeccC
Q 012366 381 HSVDFK-GSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQDLCMIPTPY 459 (465)
Q Consensus 381 ~~~~~~-~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (465)
++.+.. ..+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++.. +....+++++|+.++.+++++|
T Consensus 425 ~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~-----~~~~~~~~l~~~~gl~l~l~~~ 499 (500)
T PLN02169 425 DNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHK-----IEAIPSILLRMKHGLKVTVTKK 499 (500)
T ss_pred CCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCC-----cccccceEEecCCCEEEEEEeC
Confidence 543211 2356899999999999999999999999999999999999876532 2334567788999999999876
No 20
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00 E-value=3.1e-66 Score=506.53 Aligned_cols=368 Identities=22% Similarity=0.402 Sum_probs=283.8
Q ss_pred CCceEeCCCChhHHHHHhhhhhccCcHHHHHHhHHHH-HHHHHHHHHHHHh--CCCCceehhHHHHHHHHHHHhhhhhcc
Q 012366 81 NSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFRSIR-EAEVCNLINWISS--NEGSVINLTEKVFSLMYGITSRAAFGN 157 (465)
Q Consensus 81 ~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~-~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~vi~~~~fG~ 157 (465)
+.+ +++.+|+.|+++||. +++.|+..+++.+.+.+ .+.++.+++.+.+ ..++++|+.+++..+++|++++++||.
T Consensus 112 g~~-l~~~~g~~w~~~Rr~-l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~ 189 (516)
T PLN03195 112 GDG-IFNVDGELWRKQRKT-ASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVGFGV 189 (516)
T ss_pred cCe-eeccCcHHHHHHHHh-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHHhCC
Confidence 444 456789999999999 68999999999999876 6667777776653 356789999999999999999999998
Q ss_pred CcchH------HHHHHHHHHHHhhhcccchhhhcccchhhhhhh-hhHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----
Q 012366 158 KSSEQ------EAFVSVMEETTKVISGFNIADLFPSFELLQWVT-GFRSHAEKLHQQADRIVESIINDHKKCETK----- 225 (465)
Q Consensus 158 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----- 225 (465)
+++.. ..+...+........ .....|.+.+..+.. +..+...+..+.+.+++.+.++++++....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 266 (516)
T PLN03195 190 EIGTLSPSLPENPFAQAFDTANIIVT---LRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEARKSG 266 (516)
T ss_pred CccccccCCCccHHHHHHHHHHHHHH---HHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 87531 234333333222110 111112221111111 122344556777888888888777654221
Q ss_pred CCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcC-----
Q 012366 226 NESDRDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFNR----- 300 (465)
Q Consensus 226 ~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~----- 300 (465)
+....|+++.+++..+++ ...+++++++++++++++||+|||+++++|++++|++||++|+|+|+||+++.++
T Consensus 267 ~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~ 344 (516)
T PLN03195 267 KKVKHDILSRFIELGEDP--DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEE 344 (516)
T ss_pred ccccccHHHHHHhccCCC--CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccc
Confidence 123568999999765432 2358999999999999999999999999999999999999999999999998643
Q ss_pred ---------------CCCcCccccCCChhHHHHHHhhcCCCCCCCCCCcccCCCcee-cCeeeCCCCEEEEechhcccCC
Q 012366 301 ---------------KGKIDETGISEMKYLKLVVKETLRLRPSAPLIPRECGESCEI-NGFNIPVKARIIVNSWATGRDP 364 (465)
Q Consensus 301 ---------------~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~i-~g~~ip~gt~v~~~~~~~~~d~ 364 (465)
.+.++++++++||||+|||+|+||++|+++...|.+.+|..+ +|+.|||||.|.++.+.+|+||
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp 424 (516)
T PLN03195 345 DPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRME 424 (516)
T ss_pred cccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhhccCh
Confidence 245788999999999999999999999999997777776665 9999999999999999999999
Q ss_pred CCC-CCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccC
Q 012366 365 MYW-TQPESFIPERFIDHSVDFKGSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFG 443 (465)
Q Consensus 365 ~~~-~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~ 443 (465)
++| +||++|+||||++++......+..++|||+|+|.|+|++||++|++++++.|+++|++++.++.+ ......
T Consensus 425 ~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~-----~~~~~~ 499 (516)
T PLN03195 425 YNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHP-----VKYRMM 499 (516)
T ss_pred hhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCc-----ceeeee
Confidence 999 99999999999964321123445799999999999999999999999999999999999876532 223344
Q ss_pred cccccCCceeEeeccCC
Q 012366 444 VTVRRKQDLCMIPTPYH 460 (465)
Q Consensus 444 ~~~~~~~~~~~~~~~~~ 460 (465)
.++.|+.++.|++++|.
T Consensus 500 ~~~~~~~~~~v~~~~r~ 516 (516)
T PLN03195 500 TILSMANGLKVTVSRRS 516 (516)
T ss_pred eEEecCCCEEEEEEeCC
Confidence 55678889999998873
No 21
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00 E-value=4.1e-65 Score=490.98 Aligned_cols=424 Identities=19% Similarity=0.274 Sum_probs=322.3
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCCcccccccccCCCCchHHHHhhcC------------
Q 012366 1 MELEFPTFQIFLAFLVFVFILLKLEKTSKTNNTTSNLPPGPRKLPVIGNLHQLVGSLPHHGLRDLAKK------------ 68 (465)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgP~~~p~lG~~~~~~~~~~~~~~~~~~~~------------ 68 (465)
|+.....+.++++.++++++.++.+...... .+.+.||||+++|++|+++++..++++.++.+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~ 79 (463)
T PLN02196 1 MDFSALFLTLFAGALFLCLLRFLAGFRRSSS-TKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGC 79 (463)
T ss_pred CchHhhhhHHHHHHHHHHHHHHHHHhccCCC-CCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCC
Confidence 3333333343444444444444433233222 456789999999999999886467899999999887
Q ss_pred -----------------CCccchh-----hhccCCCceEeCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHHHHH
Q 012366 69 -----------------PPVLAAK-----IMSYDNSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCNLIN 126 (465)
Q Consensus 69 -----------------~~~~~~~-----~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~l~~ 126 (465)
....... .....|...++..+|+.|+++|++ +.+.|+++.++.+.+.+++.++++++
T Consensus 80 ~~v~v~~p~~~~~vl~~~~~~~~~~~~~~~~~~~g~~~l~~~~g~~w~~~Rk~-l~~~f~~~~l~~~~~~i~~~~~~~~~ 158 (463)
T PLN02196 80 PCVMISSPEAAKFVLVTKSHLFKPTFPASKERMLGKQAIFFHQGDYHAKLRKL-VLRAFMPDAIRNMVPDIESIAQESLN 158 (463)
T ss_pred ceEEEcCHHHHHHHHhCCCCcccccCchHHHHHcCcccccccCcHHHHHHHHH-HHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 0000000 000123334556679999999999 57899999999999999999999998
Q ss_pred HHHhCCCCceehhHHHHHHHHHHHhhhhhccCcch-HHHHHHHHHHHHhhhcccchhhhcccchhhhhhhhhHHHHHHHH
Q 012366 127 WISSNEGSVINLTEKVFSLMYGITSRAAFGNKSSE-QEAFVSVMEETTKVISGFNIADLFPSFELLQWVTGFRSHAEKLH 205 (465)
Q Consensus 127 ~l~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~ 205 (465)
.+. ++++|+.+++..+++++++.++||.+... .+++.+......... ..+|+.. .....++..++.
T Consensus 159 ~~~---~~~v~~~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~------~~~~~~~----p~~~~~~~~~a~ 225 (463)
T PLN02196 159 SWE---GTQINTYQEMKTYTFNVALLSIFGKDEVLYREDLKRCYYILEKGY------NSMPINL----PGTLFHKSMKAR 225 (463)
T ss_pred cCC---CCeEEeHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhcch------hcccccC----CCccchHHHHHH
Confidence 873 35799999999999999999999987543 223333222221111 1122210 001124556777
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCch
Q 012366 206 QQADRIVESIINDHKKCETKNESDRDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPG 285 (465)
Q Consensus 206 ~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~ 285 (465)
+.+.+++.+.++++++.. ....|+++.+++.. ..++++++.++++++++||+|||+++++|++++|++||+
T Consensus 226 ~~~~~~~~~~i~~~~~~~---~~~~d~l~~ll~~~------~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~ 296 (463)
T PLN02196 226 KELAQILAKILSKRRQNG---SSHNDLLGSFMGDK------EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPS 296 (463)
T ss_pred HHHHHHHHHHHHHHhhcC---CCcccHHHHHHhcC------CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHH
Confidence 788888888887776532 23578999988531 248899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcC---CCCcCccccCCChhHHHHHHhhcCCCCCCCCCCcccCCCceecCeeeCCCCEEEEechhccc
Q 012366 286 VMKKAQAEVREVFNR---KGKIDETGISEMKYLKLVVKETLRLRPSAPLIPRECGESCEINGFNIPVKARIIVNSWATGR 362 (465)
Q Consensus 286 ~~~~lr~Ei~~~~~~---~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~gt~v~~~~~~~~~ 362 (465)
+|+|+++|++++.+. ++.++.++++++|||+|||+|++|++|+++...|.+.+|++++||.|||||.|+++.+.+|+
T Consensus 297 vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~r 376 (463)
T PLN02196 297 VLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHH 376 (463)
T ss_pred HHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcC
Confidence 999999999998863 35688999999999999999999999999999899999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCccccc
Q 012366 363 DPMYWTQPESFIPERFIDHSVDFKGSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETF 442 (465)
Q Consensus 363 d~~~~~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 442 (465)
||++|+||++|+||||++.. .+..++|||.|+|.|+|+++|.+|++++++.|+++|++++.++.. ++. .
T Consensus 377 d~~~~~dP~~F~PeRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~----~~~--~ 445 (463)
T PLN02196 377 SADIFSDPGKFDPSRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSN----GIQ--Y 445 (463)
T ss_pred CchhcCCcCccChhhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCC----ceE--E
Confidence 99999999999999999632 345799999999999999999999999999999999999876422 222 2
Q ss_pred CcccccCCceeEeeccC
Q 012366 443 GVTVRRKQDLCMIPTPY 459 (465)
Q Consensus 443 ~~~~~~~~~~~~~~~~~ 459 (465)
..+..|++++.|++++.
T Consensus 446 ~~~~~p~~~~~~~~~~~ 462 (463)
T PLN02196 446 GPFALPQNGLPIALSRK 462 (463)
T ss_pred cccccCCCCceEEEecC
Confidence 32345888988887653
No 22
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00 E-value=4.8e-64 Score=490.13 Aligned_cols=405 Identities=21% Similarity=0.333 Sum_probs=311.6
Q ss_pred CCCCCCCCCCCCCCccccccccc----CCCCchHHHHhhcC-CC--ccc---------------------------h---
Q 012366 32 NTTSNLPPGPRKLPVIGNLHQLV----GSLPHHGLRDLAKK-PP--VLA---------------------------A--- 74 (465)
Q Consensus 32 ~~~~~~pPgP~~~p~lG~~~~~~----~~~~~~~~~~~~~~-~~--~~~---------------------------~--- 74 (465)
..+.++||||+++|++|+++++. ..+++.++.+++++ .+ ... .
T Consensus 38 ~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~~f~~~~ 117 (490)
T PLN02302 38 EGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDDAFEPGW 117 (490)
T ss_pred cCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCCccccCC
Confidence 34556899999999999998863 34678888888775 10 000 0
Q ss_pred --hhhccCCCceEeCCCChhHHHHHhhhhhccC-cHHHHHHhHHHHHHHHHHHHHHHHhCCCCceehhHHHHHHHHHHHh
Q 012366 75 --KIMSYDNSGIIFSPYGDCWRQLRKICVSELL-SAKRVQSFRSIREAEVCNLINWISSNEGSVINLTEKVFSLMYGITS 151 (465)
Q Consensus 75 --~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~-s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~ 151 (465)
......+.+.++..+|+.|+++|+.+ .+.| +++.++.+.+.+++.++++++.+.+ ++.+|+.+.+..+++++++
T Consensus 118 ~~~~~~~~g~~~~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~--~~~v~~~~~~~~~~~~vi~ 194 (490)
T PLN02302 118 PESTVELIGRKSFVGITGEEHKRLRRLT-AAPVNGPEALSTYIPYIEENVKSCLEKWSK--MGEIEFLTELRKLTFKIIM 194 (490)
T ss_pred chhHHHHhccccccccCcHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHHhcC--CCCEehHHHHHHHHHHHHH
Confidence 00001122334556799999999995 6666 5788999999999999999998853 3569999999999999999
Q ss_pred hhhhccCcchHH-HHHHHHHHHHhhhcccchhhhcccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcC--CC
Q 012366 152 RAAFGNKSSEQE-AFVSVMEETTKVISGFNIADLFPSFELLQWVTGFRSHAEKLHQQADRIVESIINDHKKCETKN--ES 228 (465)
Q Consensus 152 ~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~ 228 (465)
+++||.+.+... .+............. +...+|... ..+..++.+.+.+++.+.++++.+....+ ..
T Consensus 195 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~--------~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~ 264 (490)
T PLN02302 195 YIFLSSESELVMEALEREYTTLNYGVRA--MAINLPGFA--------YHRALKARKKLVALFQSIVDERRNSRKQNISPR 264 (490)
T ss_pred HHHcCCCChHHHHHHHHHHHHHHHHhhh--CCcCCCchh--------hHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Confidence 999998875422 222222211111110 111122211 12334456677777877777766543221 24
Q ss_pred cccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCC----CCc
Q 012366 229 DRDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFNRK----GKI 304 (465)
Q Consensus 229 ~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~----~~~ 304 (465)
..|+++.+++..++++ ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+++++++. ..+
T Consensus 265 ~~d~l~~ll~~~~~~~--~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~ 342 (490)
T PLN02302 265 KKDMLDLLLDAEDENG--RKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGL 342 (490)
T ss_pred cCCHHHHHHhhhccCC--CCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 5799999998754432 3488999999999999999999999999999999999999999999999998642 137
Q ss_pred CccccCCChhHHHHHHhhcCCCCCCCCCCcccCCCceecCeeeCCCCEEEEechhcccCCCCCCCCCCCCCCCCCCCCCC
Q 012366 305 DETGISEMKYLKLVVKETLRLRPSAPLIPRECGESCEINGFNIPVKARIIVNSWATGRDPMYWTQPESFIPERFIDHSVD 384 (465)
Q Consensus 305 ~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~ 384 (465)
++++++++|||+|||+|++|++|+++..+|.+.+|++++|+.||+||.|.++.+.+|+||++|+||++|+||||++..
T Consensus 343 ~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~-- 420 (490)
T PLN02302 343 TLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT-- 420 (490)
T ss_pred CHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC--
Confidence 889999999999999999999999998889999999999999999999999999999999999999999999999643
Q ss_pred CCCCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCCceeEeeccCCC
Q 012366 385 FKGSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQDLCMIPTPYHH 461 (465)
Q Consensus 385 ~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (465)
..+..++|||.|+|.|+|+++|.+|++++++.|+++|++++.++.. +.. ....++|++++.+++++|.+
T Consensus 421 --~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~----~~~--~~~~~~p~~~~~~~~~~~~~ 489 (490)
T PLN02302 421 --PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGC----KVM--YLPHPRPKDNCLARITKVAS 489 (490)
T ss_pred --CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCC----cce--eCCCCCCCCCceEEEEeccC
Confidence 2445799999999999999999999999999999999999875421 222 22236788899999888754
No 23
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-64 Score=458.08 Aligned_cols=414 Identities=22% Similarity=0.353 Sum_probs=325.9
Q ss_pred CCCCCCCCCCCCCccccccc---ccCCCCchHHHHhhcC----------------------------------CCcc--c
Q 012366 33 TTSNLPPGPRKLPVIGNLHQ---LVGSLPHHGLRDLAKK----------------------------------PPVL--A 73 (465)
Q Consensus 33 ~~~~~pPgP~~~p~lG~~~~---~~~~~~~~~~~~~~~~----------------------------------~~~~--~ 73 (465)
.+...+|||+++|++|..+. ....+.|+....++++ |... .
T Consensus 47 r~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~~P~Rp~~~ 126 (519)
T KOG0159|consen 47 RPFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGKYPFRPLLI 126 (519)
T ss_pred CChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCCCCCccccc
Confidence 34456799999999999884 3234566666666666 1110 0
Q ss_pred h----hhhccCCCceEeCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHHHHHHHHh--C---CCCceehhHHHHH
Q 012366 74 A----KIMSYDNSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCNLINWISS--N---EGSVINLTEKVFS 144 (465)
Q Consensus 74 ~----~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~l~~--~---~~~~vd~~~~~~~ 144 (465)
. ..-.+++...++..+|+.|.+.|..+...+++++.++.|.+.+++.+++++..+.. + ...+.|+.+.+.+
T Consensus 127 ~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~ 206 (519)
T KOG0159|consen 127 EPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYR 206 (519)
T ss_pred chhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence 0 01112344556778899999999998888999999999999999999999999875 2 3458999999999
Q ss_pred HHHHHHhhhhhccCcch--------HHHHHHHHHHHHhhhcccchhhhcccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 012366 145 LMYGITSRAAFGNKSSE--------QEAFVSVMEETTKVISGFNIADLFPSFELLQWVTGFRSHAEKLHQQADRIVESII 216 (465)
Q Consensus 145 ~~~~vi~~~~fG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i 216 (465)
+++..+|.++||+++.. .+.+.+++..++... .-..+.|.++.. ..++.+++..++.+.+.++..+.|
T Consensus 207 wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s---~~l~~~p~l~r~-~~t~~wk~~~~~~D~i~~~~~~~I 282 (519)
T KOG0159|consen 207 WSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESS---AQLMLMPSLWRY-FPTKVWKDFVRAWDQIFDVGDKYI 282 (519)
T ss_pred HHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhH---HHHHhcchHHHh-CCChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998752 124455555444332 233334433221 234567888888888888888888
Q ss_pred HHHHhhhhcCCC-cccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHH
Q 012366 217 NDHKKCETKNES-DRDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVR 295 (465)
Q Consensus 217 ~~~~~~~~~~~~-~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~ 295 (465)
+...++.+.... ....-+.+++....+ .++.+++..+++++++||+||||++++|+||+|++||++|++|++|+.
T Consensus 283 d~~l~~l~~~~~~~~~~~~~l~~~L~~~----~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~ 358 (519)
T KOG0159|consen 283 DNALEELEKQDSAGSEYTGSLLELLLRK----ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEIL 358 (519)
T ss_pred HHHHHHHHhccccccchhHHHHHHHHHc----cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHH
Confidence 766655433211 122333333333332 278999999999999999999999999999999999999999999999
Q ss_pred HHhcC-CCCcCccccCCChhHHHHHHhhcCCCCCCCCCCcccCCCceecCeeeCCCCEEEEechhcccCCCCCCCCCCCC
Q 012366 296 EVFNR-KGKIDETGISEMKYLKLVVKETLRLRPSAPLIPRECGESCEINGFNIPVKARIIVNSWATGRDPMYWTQPESFI 374 (465)
Q Consensus 296 ~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~ 374 (465)
++... +..++.+++.++|||.||||||+||||.+++..|+..+|..++||.|||||.|.+..+...+||++|++|++|+
T Consensus 359 ~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~ 438 (519)
T KOG0159|consen 359 AVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFL 438 (519)
T ss_pred hhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccChhhCCCccccC
Confidence 99987 57899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCCceeE
Q 012366 375 PERFIDHSVDFKGSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQDLCM 454 (465)
Q Consensus 375 P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (465)
||||++++. ...+++.++|||.|+|+|+|+++|.+|+.+++|.|+++|+++..++.+ ++ +....+..|..++.+
T Consensus 439 PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~p---v~--~~~~~il~P~~~l~f 512 (519)
T KOG0159|consen 439 PERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEP---VE--YVYRFILVPNRPLRF 512 (519)
T ss_pred hhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCC---cc--ceeEEEEcCCCCcce
Confidence 999998763 256789999999999999999999999999999999999999887643 33 444555566668888
Q ss_pred eeccCC
Q 012366 455 IPTPYH 460 (465)
Q Consensus 455 ~~~~~~ 460 (465)
+.++|+
T Consensus 513 ~f~~r~ 518 (519)
T KOG0159|consen 513 KFRPRN 518 (519)
T ss_pred eeeeCC
Confidence 887774
No 24
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00 E-value=3e-64 Score=494.50 Aligned_cols=366 Identities=23% Similarity=0.372 Sum_probs=283.9
Q ss_pred EeCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHHHHHHHHh--CCCCceehhHHHHHHHHHHHhhhhhccCcch-
Q 012366 85 IFSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCNLINWISS--NEGSVINLTEKVFSLMYGITSRAAFGNKSSE- 161 (465)
Q Consensus 85 ~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~- 161 (465)
++..+|+.|+.+|+. +.++|+...++.+.+.+.++++.+++.|.+ ..++++|+.+.+..+++|+++.++||.+++.
T Consensus 214 l~~~dge~wr~rRr~-l~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~ 292 (633)
T PLN02738 214 LIPADGEIWRVRRRA-IVPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSL 292 (633)
T ss_pred eecCCcHHHHHHHHh-ccHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCcccc
Confidence 345679999999999 689999999999999999999999999975 4577999999999999999999999998763
Q ss_pred --HHHHHHHHHHHHhhhcccchhhhcccch-hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhh----------cCCC
Q 012366 162 --QEAFVSVMEETTKVISGFNIADLFPSFE-LLQWVTGFRSHAEKLHQQADRIVESIINDHKKCET----------KNES 228 (465)
Q Consensus 162 --~~~~~~~~~~~~~~~~~~~~~~~~P~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----------~~~~ 228 (465)
++++...+..............+.++.. .+..++...++..+..+.+...+..+++.+++..+ .+..
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~ 372 (633)
T PLN02738 293 SNDTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNER 372 (633)
T ss_pred ccchHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccc
Confidence 2334333333222111101111111110 00111111233334444455555555543322110 0123
Q ss_pred cccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCCCCcCccc
Q 012366 229 DRDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFNRKGKIDETG 308 (465)
Q Consensus 229 ~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~ 308 (465)
..|+++.|++.. ..++++++.++++.+++||+|||+.+++|++++|++||++|+|||+||++++++ +.+++++
T Consensus 373 ~~dil~~Ll~~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~ed 445 (633)
T PLN02738 373 DPSILHFLLASG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIED 445 (633)
T ss_pred cchHHHHHHHcC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHH
Confidence 458999998753 138899999999999999999999999999999999999999999999999984 5789999
Q ss_pred cCCChhHHHHHHhhcCCCCCCCCCCcccCCCceecCeeeCCCCEEEEechhcccCCCCCCCCCCCCCCCCCCCCC--CCC
Q 012366 309 ISEMKYLKLVVKETLRLRPSAPLIPRECGESCEINGFNIPVKARIIVNSWATGRDPMYWTQPESFIPERFIDHSV--DFK 386 (465)
Q Consensus 309 ~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~--~~~ 386 (465)
+++||||+|||+|+|||+|+++...|.+.+|.+++||.||+||.|.++.+.+|+||++|+||++|+||||++++. +..
T Consensus 446 L~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~ 525 (633)
T PLN02738 446 MKKLKYTTRVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNET 525 (633)
T ss_pred HccCHHHHHHHHHHHhcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCcccc
Confidence 999999999999999999999999899999999999999999999999999999999999999999999985321 112
Q ss_pred CCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCCceeEeeccCCCC
Q 012366 387 GSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQDLCMIPTPYHHS 462 (465)
Q Consensus 387 ~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (465)
.....++|||.|+|.|+|++||.+|+++++|.|+++|+|++.++.+ +.+ ...+.++.++.++.+++++|..+
T Consensus 526 ~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~--~~~--~~~~~~~~p~~~l~v~l~~R~~~ 597 (633)
T PLN02738 526 NQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP--PVK--MTTGATIHTTEGLKMTVTRRTKP 597 (633)
T ss_pred CCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC--Ccc--cccceEEeeCCCcEEEEEECCCC
Confidence 3456899999999999999999999999999999999999887642 222 33455677888999999999665
No 25
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00 E-value=1.5e-63 Score=479.56 Aligned_cols=399 Identities=19% Similarity=0.275 Sum_probs=307.0
Q ss_pred CCCCCCCCCCCCCccccccccc----CCCCchHHHHhhcC------------------------------CCccc---hh
Q 012366 33 TTSNLPPGPRKLPVIGNLHQLV----GSLPHHGLRDLAKK------------------------------PPVLA---AK 75 (465)
Q Consensus 33 ~~~~~pPgP~~~p~lG~~~~~~----~~~~~~~~~~~~~~------------------------------~~~~~---~~ 75 (465)
++++.||||.++|++||++++. ..+++.++.+++++ ..... ..
T Consensus 4 ~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~ 83 (452)
T PLN03141 4 KKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPK 83 (452)
T ss_pred CCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCch
Confidence 5567899999999999999873 23678888888876 00000 00
Q ss_pred hh-ccCCCceEeCCCChhHHHHHhhhhhccCcHHHHHH-hHHHHHHHHHHHHHHHHhCCCCceehhHHHHHHHHHHHhhh
Q 012366 76 IM-SYDNSGIIFSPYGDCWRQLRKICVSELLSAKRVQS-FRSIREAEVCNLINWISSNEGSVINLTEKVFSLMYGITSRA 153 (465)
Q Consensus 76 ~~-~~~~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~ 153 (465)
.+ ...|.+.++..+|+.|+++|+. +.+.|+...+.. +.+.+.+.++++++.+ ..++++|+.+.+..+++++++++
T Consensus 84 ~~~~l~g~~~~~~~~g~~wr~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vi~~~ 160 (452)
T PLN03141 84 SLTELMGKSSILLINGSLQRRVHGL-IGAFLKSPHLKAQITRDMERYVSESLDSW--RDDPPVLVQDETKKIAFEVLVKA 160 (452)
T ss_pred hHHHHhCcccccccCcHHHHHHHHH-HHHhcCcHHHHHHHHHHHHHHHHHHHHhc--cCCCCEEhHHHHHHHHHHHHHHH
Confidence 00 0113334556679999999999 577787766665 4566677777777665 34568999999999999999999
Q ss_pred hhccCcchH-HHHHHHHHHHHhhhcccchhhhcccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC-----
Q 012366 154 AFGNKSSEQ-EAFVSVMEETTKVISGFNIADLFPSFELLQWVTGFRSHAEKLHQQADRIVESIINDHKKCETKNE----- 227 (465)
Q Consensus 154 ~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----- 227 (465)
+||.+...+ +++...+..+..... .+...+|... ..+..++.+.+.+++..+++++++..+.+.
T Consensus 161 ~~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~--------~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~ 230 (452)
T PLN03141 161 LISLEPGEEMEFLKKEFQEFIKGLM--SLPIKLPGTR--------LYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETG 230 (452)
T ss_pred HcCCCchHHHHHHHHHHHHHhhhHH--hCccCCCchH--------hHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccC
Confidence 999876432 222222222222111 1111122211 123446678888888888887765433211
Q ss_pred CcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhc----CCCC
Q 012366 228 SDRDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFN----RKGK 303 (465)
Q Consensus 228 ~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~----~~~~ 303 (465)
...|+++.++++.. ..+++++++.++.++++||+|||+++++|++++|++||++|+++++|++++.+ ..+.
T Consensus 231 ~~~d~l~~ll~~~~-----~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~ 305 (452)
T PLN03141 231 IPKDVVDVLLRDGS-----DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEP 305 (452)
T ss_pred ChhhHHHHHHhcCC-----CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCC
Confidence 24689999987542 24889999999999999999999999999999999999999999999998863 2345
Q ss_pred cCccccCCChhHHHHHHhhcCCCCCCCCCCcccCCCceecCeeeCCCCEEEEechhcccCCCCCCCCCCCCCCCCCCCCC
Q 012366 304 IDETGISEMKYLKLVVKETLRLRPSAPLIPRECGESCEINGFNIPVKARIIVNSWATGRDPMYWTQPESFIPERFIDHSV 383 (465)
Q Consensus 304 ~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~ 383 (465)
++.+++.++|||+|||+|++|++|+++..+|.+.+|++++||.|||||.|.++.+.+|+||++|+||++|+||||++++
T Consensus 306 ~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~- 384 (452)
T PLN03141 306 LYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKD- 384 (452)
T ss_pred CCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCC-
Confidence 7889999999999999999999999987799999999999999999999999999999999999999999999999753
Q ss_pred CCCCCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCCceeEeeccCCC
Q 012366 384 DFKGSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQDLCMIPTPYHH 461 (465)
Q Consensus 384 ~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (465)
..+..|+|||+|+|.|+|++||.+|+++++|.|+++|++++.++.. . ...++.|+.++.|++++|.+
T Consensus 385 ---~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~ 451 (452)
T PLN03141 385 ---MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTI-----V---NFPTVRMKRKLPIWVTRIDD 451 (452)
T ss_pred ---CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCe-----e---ecccccCCCCceEEEEeCCC
Confidence 2345799999999999999999999999999999999999876532 1 12467888999999999965
No 26
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00 E-value=4.3e-65 Score=496.54 Aligned_cols=389 Identities=32% Similarity=0.577 Sum_probs=315.3
Q ss_pred CCCCCCCCccccccccc-CCCCchHHHHhhcC-----------------------------CC--cc------chhh--h
Q 012366 38 PPGPRKLPVIGNLHQLV-GSLPHHGLRDLAKK-----------------------------PP--VL------AAKI--M 77 (465)
Q Consensus 38 pPgP~~~p~lG~~~~~~-~~~~~~~~~~~~~~-----------------------------~~--~~------~~~~--~ 77 (465)
||||+++|++||.+++. .++++..+.+++++ .. .. .... .
T Consensus 1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~ 80 (463)
T PF00067_consen 1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG 80 (463)
T ss_dssp SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence 89999999999999984 26788889999887 10 00 0110 1
Q ss_pred ccCCCceEeCCCChhHHHHHhhhhhccCcHH-HHHHhHHHHHHHHHHHHHHHHhCCCC--ceehhHHHHHHHHHHHhhhh
Q 012366 78 SYDNSGIIFSPYGDCWRQLRKICVSELLSAK-RVQSFRSIREAEVCNLINWISSNEGS--VINLTEKVFSLMYGITSRAA 154 (465)
Q Consensus 78 ~~~~~~~~~~~~g~~w~~~R~~~~~~~~s~~-~~~~~~~~~~~~~~~l~~~l~~~~~~--~vd~~~~~~~~~~~vi~~~~ 154 (465)
...+.++ +..+|+.|+.+|+. +.+.|+.. .+ .+.+.+++.++.+++.+.+..+. .+|+.++++.+++|++++++
T Consensus 81 ~~~~~~l-~~~~~~~~~~~R~~-~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~ 157 (463)
T PF00067_consen 81 PFGGKGL-FFSDGERWRRQRRL-LAPAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL 157 (463)
T ss_dssp HHTTTSS-TTSSHHHHHHHHHH-HHHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred ccccccc-cccccccccccccc-ccccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence 1234444 45568999999999 46677766 66 99999999999999999874333 69999999999999999999
Q ss_pred hccCcc-h-H---HHHHHHHHHHHhhhccc--chhhhcccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-
Q 012366 155 FGNKSS-E-Q---EAFVSVMEETTKVISGF--NIADLFPSFELLQWVTGFRSHAEKLHQQADRIVESIINDHKKCETKN- 226 (465)
Q Consensus 155 fG~~~~-~-~---~~~~~~~~~~~~~~~~~--~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~- 226 (465)
||.+++ . + .++.+.+..+...+... .+...+|++.++ .....+....+.+.+.+++.++++++++..+.+
T Consensus 158 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 235 (463)
T PF00067_consen 158 FGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL--PTPLFRRFKRARDRLRKYIKEIIEERREELDDGD 235 (463)
T ss_dssp HSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSSS
T ss_pred ccceeeeccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccc
Confidence 999865 1 1 23455555554433221 234455543322 223446667777889999999999988877664
Q ss_pred CCcccHHHHHHHhh-hcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCCCCcC
Q 012366 227 ESDRDLVDVLLKIQ-EDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFNRKGKID 305 (465)
Q Consensus 227 ~~~~d~l~~ll~~~-~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~ 305 (465)
....|+++.+++.. +.++ ...++.+++++.++.+++||+|||+.+++|++++|++||++|+++++||+++.++.+.++
T Consensus 236 ~~~~d~l~~ll~~~~~~~~-~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~ 314 (463)
T PF00067_consen 236 ESRRDLLDSLLQASSDSDG-PSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREIT 314 (463)
T ss_dssp SSCSSHHHHHHHHHHTTTT-TSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSHH
T ss_pred ccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 46789999999987 2222 146999999999999999999999999999999999999999999999999997777899
Q ss_pred ccccCCChhHHHHHHhhcCCCCCCCC-CCcccCCCceecCeeeCCCCEEEEechhcccCCCCCCCCCCCCCCCCCCCCCC
Q 012366 306 ETGISEMKYLKLVVKETLRLRPSAPL-IPRECGESCEINGFNIPVKARIIVNSWATGRDPMYWTQPESFIPERFIDHSVD 384 (465)
Q Consensus 306 ~~~~~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~ 384 (465)
.+++++||||+|||+||+|++|+++. .+|.+.+|++++|+.||+||.|.++.+.+|+||++|+||++|+||||++++..
T Consensus 315 ~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~ 394 (463)
T PF00067_consen 315 FEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERGI 394 (463)
T ss_dssp HHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTST
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999995 59999999999999999999999999999999999999999999999987642
Q ss_pred CCCCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCC
Q 012366 385 FKGSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMN 432 (465)
Q Consensus 385 ~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~ 432 (465)
.......++|||.|+|.|||++||.+|+++++|.||++|++++.++..
T Consensus 395 ~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~ 442 (463)
T PF00067_consen 395 SNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSE 442 (463)
T ss_dssp BCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSS
T ss_pred cccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCC
Confidence 234567899999999999999999999999999999999999977644
No 27
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00 E-value=2e-62 Score=470.60 Aligned_cols=399 Identities=18% Similarity=0.272 Sum_probs=303.0
Q ss_pred CCCCCCCCCCCCCCccccccccc----CCCCchHHHHhhcC------------------------------CCcc----c
Q 012366 32 NTTSNLPPGPRKLPVIGNLHQLV----GSLPHHGLRDLAKK------------------------------PPVL----A 73 (465)
Q Consensus 32 ~~~~~~pPgP~~~p~lG~~~~~~----~~~~~~~~~~~~~~------------------------------~~~~----~ 73 (465)
..+.++||||.++|++||++++. .++++.++.+++++ .... .
T Consensus 26 ~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~ 105 (472)
T PLN02987 26 YRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYP 105 (472)
T ss_pred cCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCc
Confidence 35556899999999999998873 24678888888776 0000 0
Q ss_pred hhhhc-cCCCceEeCCCChhHHHHHhhhhhccCcHHHHHHhHH-HHHHHHHHHHHHHHhCCCCceehhHHHHHHHHHHHh
Q 012366 74 AKIMS-YDNSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFRS-IREAEVCNLINWISSNEGSVINLTEKVFSLMYGITS 151 (465)
Q Consensus 74 ~~~~~-~~~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~ 151 (465)
..... .++.+++ ..+|+.|+++|+++ .++++.+.++.+.. .+.+.++..++.+ .+++++.+.+.++++++++
T Consensus 106 ~~~~~~lg~~~l~-~~~g~~wr~~R~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~t~~vi~ 179 (472)
T PLN02987 106 GSISNLLGKHSLL-LMKGNLHKKMHSLT-MSFANSSIIKDHLLLDIDRLIRFNLDSW----SSRVLLMEEAKKITFELTV 179 (472)
T ss_pred HHHHHHhCccccc-ccCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHhh----ccceehHHHHHHHHHHHHH
Confidence 00011 1223444 45799999999994 55555555554432 2333444444444 2479999999999999999
Q ss_pred hhhhccCcchH-HHHHHHHHHHHhhhcccchhhhcccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCc
Q 012366 152 RAAFGNKSSEQ-EAFVSVMEETTKVISGFNIADLFPSFELLQWVTGFRSHAEKLHQQADRIVESIINDHKKCETKN-ESD 229 (465)
Q Consensus 152 ~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~ 229 (465)
+++||.+.+.. +.+...+....... ....+|++ ....++..+..+.+.+++.++++++++....+ ...
T Consensus 180 ~~~fg~~~~~~~~~~~~~~~~~~~~~----~~~~~p~l------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~ 249 (472)
T PLN02987 180 KQLMSFDPGEWTESLRKEYVLVIEGF----FSVPLPLF------STTYRRAIQARTKVAEALTLVVMKRRKEEEEGAEKK 249 (472)
T ss_pred HHHcCCCChHHHHHHHHHHHHHHhhh----hcCCCcCC------CchHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccc
Confidence 99999876432 22322222222111 11223432 12245667788888999999998877654322 235
Q ss_pred ccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhc---CCCCcCc
Q 012366 230 RDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFN---RKGKIDE 306 (465)
Q Consensus 230 ~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~---~~~~~~~ 306 (465)
+|+++.+++... .++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++++.+ +...++.
T Consensus 250 ~d~l~~ll~~~~------~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~ 323 (472)
T PLN02987 250 KDMLAALLASDD------GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEW 323 (472)
T ss_pred ccHHHHHHhcCC------CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCH
Confidence 799999997531 3889999999999999999999999999999999999999999999999875 2345788
Q ss_pred cccCCChhHHHHHHhhcCCCCCCCCCCcccCCCceecCeeeCCCCEEEEechhcccCCCCCCCCCCCCCCCCCCCCCCCC
Q 012366 307 TGISEMKYLKLVVKETLRLRPSAPLIPRECGESCEINGFNIPVKARIIVNSWATGRDPMYWTQPESFIPERFIDHSVDFK 386 (465)
Q Consensus 307 ~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~ 386 (465)
+++.++||++||++|++|++|+++..+|.+.+|++++||.||+||.|.++.+.+|+||++|+||++|+||||++++.. .
T Consensus 324 ~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~-~ 402 (472)
T PLN02987 324 SDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT-T 402 (472)
T ss_pred HHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC-C
Confidence 999999999999999999999998779999999999999999999999999999999999999999999999975422 2
Q ss_pred CCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCCceeEeeccCC
Q 012366 387 GSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQDLCMIPTPYH 460 (465)
Q Consensus 387 ~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (465)
.....++|||.|+|.|||+++|.+|++++++.|+++|++++.++.. .. ...+++|..++.+++++|.
T Consensus 403 ~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-----~~--~~~~~~p~~~~~~~~~~r~ 469 (472)
T PLN02987 403 VPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDK-----LV--FFPTTRTQKRYPINVKRRD 469 (472)
T ss_pred CCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCc-----ee--ecccccCCCCceEEEEecc
Confidence 2345799999999999999999999999999999999999876532 22 2336788889999999885
No 28
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00 E-value=1.3e-62 Score=475.56 Aligned_cols=365 Identities=20% Similarity=0.325 Sum_probs=289.3
Q ss_pred CCceEeCCCChhHHHHHhhhhhccCcHHHHHHhH--HHHHHHHHHHHHHHHh----CCCCceehhHHHHHHHHHHHhhhh
Q 012366 81 NSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFR--SIREAEVCNLINWISS----NEGSVINLTEKVFSLMYGITSRAA 154 (465)
Q Consensus 81 ~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~--~~~~~~~~~l~~~l~~----~~~~~vd~~~~~~~~~~~vi~~~~ 154 (465)
|.|+ ++.+|+.|+.+||. +++.|+...++.+. +.+++.++.+++.+.+ ..++++|+.++++++++|+++.++
T Consensus 120 g~gi-~~~~g~~wk~~Rk~-l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~ 197 (502)
T PLN02426 120 GRGI-FNVDGDSWRFQRKM-ASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFS 197 (502)
T ss_pred CCce-eecCcHHHHHHHHH-hHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHH
Confidence 4554 56779999999999 59999998888764 6777777888887764 224679999999999999999999
Q ss_pred hccCcchH------HHHHHHHHHHHhhhcccchhhhcccchhh-hhhh-hhHHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 012366 155 FGNKSSEQ------EAFVSVMEETTKVISGFNIADLFPSFELL-QWVT-GFRSHAEKLHQQADRIVESIINDHKKCETKN 226 (465)
Q Consensus 155 fG~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~P~l~~~-~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 226 (465)
||.+++.. +++.+.+......... .....+|+++.+ .+++ +..++..++.+.+.+++.++|+++++...
T Consensus 198 fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~-- 274 (502)
T PLN02426 198 FGLDPGCLELSLPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGF-- 274 (502)
T ss_pred hCCCCcccCCCCCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhccc--
Confidence 99987531 2344444433221110 111122332221 1221 23356677888899999999988766432
Q ss_pred CCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCC-CCcC
Q 012366 227 ESDRDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFNRK-GKID 305 (465)
Q Consensus 227 ~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~-~~~~ 305 (465)
....|+++.+++.. .+++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++++.+ ..++
T Consensus 275 ~~~~dll~~ll~~~--------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t 346 (502)
T PLN02426 275 SASKDLLSRFMASI--------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAAS 346 (502)
T ss_pred CCcchHHHHHHhcC--------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCC
Confidence 23579999999743 25788999999999999999999999999999999999999999999998754 3679
Q ss_pred ccccCCChhHHHHHHhhcCCCCCCCCCCcccCCCcee-cCeeeCCCCEEEEechhcccCCCCC-CCCCCCCCCCCCCCCC
Q 012366 306 ETGISEMKYLKLVVKETLRLRPSAPLIPRECGESCEI-NGFNIPVKARIIVNSWATGRDPMYW-TQPESFIPERFIDHSV 383 (465)
Q Consensus 306 ~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~i-~g~~ip~gt~v~~~~~~~~~d~~~~-~~p~~F~P~R~~~~~~ 383 (465)
++++++||||+|||+|+||++|+++...|.+.+|.++ +|+.||+||.|.++.+.+||||++| +||++|+||||++++.
T Consensus 347 ~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~ 426 (502)
T PLN02426 347 FEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGV 426 (502)
T ss_pred HHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCC
Confidence 9999999999999999999999999989999998887 9999999999999999999999999 9999999999997432
Q ss_pred CCCCCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCCceeEeeccCCC
Q 012366 384 DFKGSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQDLCMIPTPYHH 461 (465)
Q Consensus 384 ~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (465)
.....+..++|||+|+|.|+|+++|.+|++++++.|+++|++++.++.. + ......+++++|++++.|++++|..
T Consensus 427 ~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~-~--~~~~~~~~~~~~~~gl~v~~~~r~~ 501 (502)
T PLN02426 427 FVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSN-R--APRFAPGLTATVRGGLPVRVRERVR 501 (502)
T ss_pred cCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCC-C--CCcccceeEEecCCCEEEEEEEccC
Confidence 1123445799999999999999999999999999999999999865422 1 1233446778899999999998853
No 29
>PLN02936 epsilon-ring hydroxylase
Probab=100.00 E-value=1.3e-61 Score=469.44 Aligned_cols=411 Identities=23% Similarity=0.366 Sum_probs=313.1
Q ss_pred CCCCCCCCCccccccccc----CCCCchHHHHhhcC-------------------C-----------Ccc----chhh-h
Q 012366 37 LPPGPRKLPVIGNLHQLV----GSLPHHGLRDLAKK-------------------P-----------PVL----AAKI-M 77 (465)
Q Consensus 37 ~pPgP~~~p~lG~~~~~~----~~~~~~~~~~~~~~-------------------~-----------~~~----~~~~-~ 77 (465)
+--|-.|||++|+.+++. ++..+..+.+|+++ | ... .... .
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~ 92 (489)
T PLN02936 13 LWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSE 92 (489)
T ss_pred cCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhH
Confidence 456888999999987765 56788899999887 0 000 0000 0
Q ss_pred ccCCCceEeCCCChhHHHHHhhhhhccCcHHHHHHhHH-HHHHHHHHHHHHHHh--CCCCceehhHHHHHHHHHHHhhhh
Q 012366 78 SYDNSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFRS-IREAEVCNLINWISS--NEGSVINLTEKVFSLMYGITSRAA 154 (465)
Q Consensus 78 ~~~~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~-~~~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~vi~~~~ 154 (465)
...+.+ ++..+|+.|+++|+. +.+.|+...++.+.+ .+.++++.+++.+.+ .+++++|+.++++++++|+++.++
T Consensus 93 ~~~~~~-i~~~~g~~wk~~Rk~-l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~ 170 (489)
T PLN02936 93 FLFGSG-FAIAEGELWTARRRA-VVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSV 170 (489)
T ss_pred HHhcCc-cccCCchHHHHHHHh-hcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHH
Confidence 012333 345679999999999 689999888888755 778899999999875 346789999999999999999999
Q ss_pred hccCcchH---HHHHHHHHHHHhhhcccchhhhcccchh--hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhc----
Q 012366 155 FGNKSSEQ---EAFVSVMEETTKVISGFNIADLFPSFEL--LQWVTGFRSHAEKLHQQADRIVESIINDHKKCETK---- 225 (465)
Q Consensus 155 fG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---- 225 (465)
||.+++.. +++.+.+........ ......+|++.+ +.++.+..++..++.+.+.+++.+.++++++..+.
T Consensus 171 fG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~ 249 (489)
T PLN02936 171 FNYNFDSLTTDSPVIQAVYTALKEAE-TRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEV 249 (489)
T ss_pred cCCCccccccCcHHHHHHHHHHHHHH-HhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 99987642 233333333222111 111223343211 11111223455667777777887777766543211
Q ss_pred -------CCCcccHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHh
Q 012366 226 -------NESDRDLVDVLLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVF 298 (465)
Q Consensus 226 -------~~~~~d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~ 298 (465)
+....|+++.|++..+ .++.+++.++++.+++||+|||+++++|++++|++||++|+++|+||++++
T Consensus 250 ~~~~~~~~~~~~d~l~~ll~~~~------~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~ 323 (489)
T PLN02936 250 IEGEEYVNDSDPSVLRFLLASRE------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVL 323 (489)
T ss_pred cccccccccCchHHHHHHHhccc------cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence 0124679999886532 378999999999999999999999999999999999999999999999998
Q ss_pred cCCCCcCccccCCChhHHHHHHhhcCCCCCCCCC-CcccCCCceecCeeeCCCCEEEEechhcccCCCCCCCCCCCCCCC
Q 012366 299 NRKGKIDETGISEMKYLKLVVKETLRLRPSAPLI-PRECGESCEINGFNIPVKARIIVNSWATGRDPMYWTQPESFIPER 377 (465)
Q Consensus 299 ~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R 377 (465)
++ ..++++++++||||+|||+||||++|+++.. +|.+.+|+.++|+.||+||.|.++.+.+|+||++|+||++|+|||
T Consensus 324 ~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR 402 (489)
T PLN02936 324 QG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPER 402 (489)
T ss_pred cC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCccc
Confidence 85 4578999999999999999999999999988 777778888899999999999999999999999999999999999
Q ss_pred CCCCCCC--CCCCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCCceeEe
Q 012366 378 FIDHSVD--FKGSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQDLCMI 455 (465)
Q Consensus 378 ~~~~~~~--~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (465)
|++++.. ....+..++|||.|+|.|||++||.++++++++.|+++|+++++++.. . ....+.++.|+.++.|+
T Consensus 403 wl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~---~--~~~~~~~~~~~~~~~v~ 477 (489)
T PLN02936 403 FDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQD---I--VMTTGATIHTTNGLYMT 477 (489)
T ss_pred cCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCc---c--ceecceEEeeCCCeEEE
Confidence 9964321 122245799999999999999999999999999999999999886532 2 22234556778899999
Q ss_pred eccCCCC
Q 012366 456 PTPYHHS 462 (465)
Q Consensus 456 ~~~~~~~ 462 (465)
.++|.-|
T Consensus 478 ~~~R~~~ 484 (489)
T PLN02936 478 VSRRRVP 484 (489)
T ss_pred EEeeeCC
Confidence 9998776
No 30
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.8e-59 Score=414.11 Aligned_cols=406 Identities=22% Similarity=0.402 Sum_probs=322.3
Q ss_pred CCCCCCC-CCCcccccccccCCCCchHHHHhhcC-------------------CCc-----------c----chhhhc--
Q 012366 36 NLPPGPR-KLPVIGNLHQLVGSLPHHGLRDLAKK-------------------PPV-----------L----AAKIMS-- 78 (465)
Q Consensus 36 ~~pPgP~-~~p~lG~~~~~~~~~~~~~~~~~~~~-------------------~~~-----------~----~~~~~~-- 78 (465)
..||.-+ ++|++|+..+| ++++.+++++..+| |.. . ....+.
T Consensus 31 ~~PPli~gwiP~lG~a~~f-gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~ 109 (486)
T KOG0684|consen 31 KEPPLIKGWIPWLGSALAF-GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTP 109 (486)
T ss_pred CCCcccccCcchhhHHHHh-ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhh
Confidence 4677665 68999999999 99999999999988 100 0 000000
Q ss_pred cCCCceEeCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHHHHHH-HHhCCCCceehhHHHHHHHHHHHhhhhhcc
Q 012366 79 YDNSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCNLINW-ISSNEGSVINLTEKVFSLMYGITSRAAFGN 157 (465)
Q Consensus 79 ~~~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~vd~~~~~~~~~~~vi~~~~fG~ 157 (465)
.-|+|++....+....++.++ ....+....++++.+.|.+++...++. +. .+|..-.+.+....+++.+.-...||+
T Consensus 110 vFg~~v~~d~~~~~~~e~~~~-~k~~L~~~~lk~~~e~m~~el~~~f~~~~~-~s~~~d~l~~~~~~ii~tAs~~ll~~e 187 (486)
T KOG0684|consen 110 VFGKGVVYDVPNHVMMEQKKF-FKSALGGVALKSLVELMLEELHAYFETSLG-ESGETDGLYTFCRLIIFTASRLLLGGE 187 (486)
T ss_pred hcCCCccccCCCchHHHHHHH-HHHHhchhhHHHHHHHHHHHHHHHHhcccc-cccchhHhhhhhHHHhhhhHHHhhhhh
Confidence 124556666666677777777 577888889999999999999888887 44 355566666777777777777777776
Q ss_pred Ccch-HHHHHHHHHHHHhhhcccchhhhccc-chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcccHHHH
Q 012366 158 KSSE-QEAFVSVMEETTKVISGFNIADLFPS-FELLQWVTGFRSHAEKLHQQADRIVESIINDHKKCETKNESDRDLVDV 235 (465)
Q Consensus 158 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ 235 (465)
.-.. +++....+.++...+.. +...||. +.. ...++..++.+.+.+....++.++++..+. ..+|+++.
T Consensus 188 ~r~~~d~~~a~l~~dLd~~F~~--~d~~FP~~LP~-----~~~r~~~ra~~~i~k~f~~~i~~rr~s~s~--~~~dmlq~ 258 (486)
T KOG0684|consen 188 VRDQLDADVAKLYHDLDQGFQP--FDFLFPYNLPI-----PLLRRRDRARKKISKIFSKIILDRRASISK--WDNDMLQS 258 (486)
T ss_pred hhhhhcchHHHHHHHHhccccc--hHhhcccCCCc-----chhhhHHHHHHHHHHHHHHHHHHHHhcccc--ccHHHHHH
Confidence 5544 44555555555544332 3334563 221 223455688899999999999888876643 36799999
Q ss_pred HHHhhhcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCCCC-cCccccCCChh
Q 012366 236 LLKIQEDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFNRKGK-IDETGISEMKY 314 (465)
Q Consensus 236 ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~-~~~~~~~~lp~ 314 (465)
+++.++++. ..+++|++...+.+++||..|++.+.+|++++|++|||+++.+++|+.+++|++.. ++.+.++++|.
T Consensus 259 l~~~y~dg~---~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lpl 335 (486)
T KOG0684|consen 259 LMEKYKDGR---PTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPL 335 (486)
T ss_pred HHHHhhcCC---cCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchH
Confidence 999555443 58899999999999999999999999999999999999999999999999998765 99999999999
Q ss_pred HHHHHHhhcCCCCCCCCCCcccCCCceecC----eeeCCCCEEEEechhcccCCCCCCCCCCCCCCCCCCCCCCCC--CC
Q 012366 315 LKLVVKETLRLRPSAPLIPRECGESCEING----FNIPVKARIIVNSWATGRDPMYWTQPESFIPERFIDHSVDFK--GS 388 (465)
Q Consensus 315 l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g----~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~--~~ 388 (465)
|++||+|||||+||.+...|.+.+|.++.+ |.||+|..|.++.+.+|+||++|+||+.|+|+||++++.+.+ +.
T Consensus 336 L~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~ 415 (486)
T KOG0684|consen 336 LDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGE 415 (486)
T ss_pred HHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccc
Confidence 999999999999999999999999999966 999999999999999999999999999999999997664421 22
Q ss_pred --CcccccCCCCCCCCcChhHHHHHhHHHHHHHHhhccccCCCCCCCCCCCcccccCcccccCCceeEeeccCC
Q 012366 389 --NFEYIPFGAGRRICPGMLYGLANVEFPLAMLLYHFDWKLPNGMNHEDLEMTETFGVTVRRKQDLCMIPTPYH 460 (465)
Q Consensus 389 --~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (465)
..+++|||+|.|.|||+.||.+|++.++..+|++|++++.++.- ++++ ++. .++.|...++|+=|.|+
T Consensus 416 kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~-P~~d--~s~-~v~~P~g~v~irYK~R~ 485 (486)
T KOG0684|consen 416 KLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPF-PEVD--YSR-MVMQPEGDVRIRYKRRP 485 (486)
T ss_pred cccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCC-CCCC--HHH-hhcCCCCCceEEEeecC
Confidence 33569999999999999999999999999999999999998732 2333 332 26789999999988775
No 31
>PLN02648 allene oxide synthase
Probab=100.00 E-value=1.4e-52 Score=399.22 Aligned_cols=373 Identities=17% Similarity=0.214 Sum_probs=264.7
Q ss_pred CCCCCCCCCCCCCCCccccccccc----CCCCchHHHHhhcC-CC-ccchhh------------------------hc--
Q 012366 31 NNTTSNLPPGPRKLPVIGNLHQLV----GSLPHHGLRDLAKK-PP-VLAAKI------------------------MS-- 78 (465)
Q Consensus 31 ~~~~~~~pPgP~~~p~lG~~~~~~----~~~~~~~~~~~~~~-~~-~~~~~~------------------------~~-- 78 (465)
...+.+.|||+.+||++|++.++. ..++..++.+..++ ++ .+...+ +.
T Consensus 12 ~~~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~ 91 (480)
T PLN02648 12 SSLPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVS 91 (480)
T ss_pred CCCCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecch
Confidence 344556699999999999998642 44556788777665 11 100000 00
Q ss_pred -----------------cCCCc---eEeCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHHHHHHHHh--CCCCce
Q 012366 79 -----------------YDNSG---IIFSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCNLINWISS--NEGSVI 136 (465)
Q Consensus 79 -----------------~~~~~---~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~l~~--~~~~~v 136 (465)
..|.+ .++..+|+.|+++|++ +.++|+. .++.+.+.|.+.++++++.|.+ ..++++
T Consensus 92 ~~~~~~~~~~~~~~~~~l~G~~~~~s~~~~~g~~H~r~Rrl-l~~~f~~-~~~~~~~~m~~~~~~~~~~w~~~~~~~~~v 169 (480)
T PLN02648 92 KVDKRDVFTGTYMPSTAFTGGYRVLSYLDPSEPKHAKLKSF-LFELLKS-RHRRFIPEFRAAFAELFDTWEAELAKKGKA 169 (480)
T ss_pred hccccccceeeeccCccccCCceeeeecCCCCchHHHHHHH-HHHHHHH-hhhhhhhHHHHHHHHHHHHHHHHHhhCCCc
Confidence 01112 4456778999999999 5889984 6788999999999999999964 345579
Q ss_pred ehhHHHHHHHHHHHhhhhhccCcchHHHHHHHHHHHHhhhcccchhhhcccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 012366 137 NLTEKVFSLMYGITSRAAFGNKSSEQEAFVSVMEETTKVISGFNIADLFPSFELLQWVTGFRSHAEKLHQQADRIVESII 216 (465)
Q Consensus 137 d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i 216 (465)
|+.+.++++++|++++++||.+.+. +.+.+.+..+...... ...+|.... .+...+++++
T Consensus 170 dv~~~~~~lt~~vi~~~lfG~~~~~-~~l~~~~~~~~~~~~~---~~~~p~~~~----------------~l~~~~~~~i 229 (480)
T PLN02648 170 EFNDPLDQMAFNFLCKALTGKDPSE-TALGSDGPALIQKWLA---LQLAPLAST----------------GLPHVLEELL 229 (480)
T ss_pred cccchHHHHHHHHHHHHHcCCCcch-hhhccchhHHHHHHHH---HHhhHHHHc----------------CchHHHHHHh
Confidence 9999999999999999999987655 2222222111111000 000111000 0000001100
Q ss_pred HHHHhhh--hcCCCcc-------cHHHHHHHhhhcCCCCCCCCHHHHHHHHHH-hhccCCcchHHHHHHHHHHHHhCch-
Q 012366 217 NDHKKCE--TKNESDR-------DLVDVLLKIQEDGNLELPLSTHNIKAVISD-IFGAGSETSATTVDWAMCEMMKNPG- 285 (465)
Q Consensus 217 ~~~~~~~--~~~~~~~-------d~l~~ll~~~~~~~~~~~~~~~~i~~~~~~-~~~ag~~tt~~~l~~~l~~L~~~p~- 285 (465)
.++.... ....... +.++.+++...+. +++++++.++++. +.+++++||+++++|++++|++||+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~----~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~ 305 (480)
T PLN02648 230 LHTFPLPFFLVKSDYDKLYDFFRASATEALDLAEKF----GISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEE 305 (480)
T ss_pred hcccCCchhhhhccHHHHHHHHHHHHHHHHHHHHhc----CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHH
Confidence 0000000 0000011 1222444443332 3899999988875 4567788888999999999999995
Q ss_pred HHHHHHHHHHHHhcC-CCCcCccccCCChhHHHHHHhhcCCCCCCCCCCcccCCCceec----CeeeCCCCEEEEechhc
Q 012366 286 VMKKAQAEVREVFNR-KGKIDETGISEMKYLKLVVKETLRLRPSAPLIPRECGESCEIN----GFNIPVKARIIVNSWAT 360 (465)
Q Consensus 286 ~~~~lr~Ei~~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~----g~~ip~gt~v~~~~~~~ 360 (465)
+|+++++||+++++. +..++++++++||||++||+|+||++|+++...|.+.+|++++ ||.||||+.|+++.+.+
T Consensus 306 v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~ 385 (480)
T PLN02648 306 LQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEMLFGYQPLV 385 (480)
T ss_pred HHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCCEEEEChHHH
Confidence 999999999999863 3468999999999999999999999999999988899999996 79999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccC---------CCCCCCCcChhHHHHHhHHHHHHHHhhcc-ccCCCC
Q 012366 361 GRDPMYWTQPESFIPERFIDHSVDFKGSNFEYIPF---------GAGRRICPGMLYGLANVEFPLAMLLYHFD-WKLPNG 430 (465)
Q Consensus 361 ~~d~~~~~~p~~F~P~R~~~~~~~~~~~~~~~~~F---------g~G~r~C~G~~la~~~~~~~~~~ll~~~~-~~~~~~ 430 (465)
|+||++|+||++|||+||++++.+ ....+++| |+|+|.|+|++||.+|++++++.|+++|+ +++.++
T Consensus 386 hrdp~~~~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~ 462 (480)
T PLN02648 386 TRDPKVFDRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVD 462 (480)
T ss_pred hCCcccCCCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCC
Confidence 999999999999999999865321 11234444 67789999999999999999999999998 999887
Q ss_pred CC
Q 012366 431 MN 432 (465)
Q Consensus 431 ~~ 432 (465)
+.
T Consensus 463 ~~ 464 (480)
T PLN02648 463 TS 464 (480)
T ss_pred cc
Confidence 54
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.3e-51 Score=388.24 Aligned_cols=301 Identities=24% Similarity=0.417 Sum_probs=263.8
Q ss_pred CCceEeCCCChhHHHHHhhhhhccCcHHHHHHhHHHHHHHHHHHHHHHHhCCCCceehhHHHHHHHHHHHhhhhhccCcc
Q 012366 81 NSGIIFSPYGDCWRQLRKICVSELLSAKRVQSFRSIREAEVCNLINWISSNEGSVINLTEKVFSLMYGITSRAAFGNKSS 160 (465)
Q Consensus 81 ~~~~~~~~~g~~w~~~R~~~~~~~~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~ 160 (465)
+.+.++..+|+.|.++||. +.+.|+++.++.+.+.+.+.++++++.+ ... +.+++.+....++.++++ .+||.+.+
T Consensus 87 ~~~~ll~~dg~~H~r~Rkl-~~~~F~~~~~~~~~~~i~~~~~~~~~~~-~~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~ 162 (411)
T COG2124 87 GDGSLLTLDGPEHTRLRKL-LAPAFTPRALRGYRPLIREIADRLLDDL-WQG-GADLVLDFAAELTLRVIA-ELLGVPLE 162 (411)
T ss_pred cccceeecCCHHHHHHHHH-hccccCHHHHHHHHHHHHHHHHHHHHhc-ccC-CchhHHHHhhhhhHHHHH-HHhCCCHH
Confidence 4554677889999999999 7999999999999999999999999998 444 789999999999999999 99999988
Q ss_pred hHHHHHHHHHHHHhhhcccchhhhcccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCcccHHHHHHHhh
Q 012366 161 EQEAFVSVMEETTKVISGFNIADLFPSFELLQWVTGFRSHAEKLHQQADRIVESIINDHKKCETKNESDRDLVDVLLKIQ 240 (465)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~ 240 (465)
+...+............ |... ......+...+...+..++..+|++++. ...+|+++.|+.+.
T Consensus 163 ~~~~~~~~~~~~~~~~~--------~~~~----~~~~~~~~~~a~~~~~~~~~~li~~rR~-----~~~~dlls~l~~a~ 225 (411)
T COG2124 163 DRPQLLRWSDALLLRLD--------PDLG----PEEPWRRARAARRELDAYLRALIAERRA-----APRDDLLSLLLSAE 225 (411)
T ss_pred HHHHHHHHHHHHHhccC--------cccC----CcccHHHHHHHHHHHHHHHHHHHHHhcc-----CCcccHHHHHHHHh
Confidence 76655544444433310 1111 1122356788899999999999999883 45789999999988
Q ss_pred hcCCCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCCCCcCccccCCChhHHHHHH
Q 012366 241 EDGNLELPLSTHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFNRKGKIDETGISEMKYLKLVVK 320 (465)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~ 320 (465)
++++ ..++++|+.++++.+++||+|||+++++|+++.|++||++++++++|.+. ||++++|+
T Consensus 226 ~~~~--~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~ 287 (411)
T COG2124 226 DDGG--GRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVE 287 (411)
T ss_pred hCCC--CcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHH
Confidence 8764 25999999999999999999999999999999999999999999998764 89999999
Q ss_pred hhcCCCCCCCCCCcccCCCceecCeeeCCCCEEEEechhcccCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCC
Q 012366 321 ETLRLRPSAPLIPRECGESCEINGFNIPVKARIIVNSWATGRDPMYWTQPESFIPERFIDHSVDFKGSNFEYIPFGAGRR 400 (465)
Q Consensus 321 E~lRl~p~~~~~~r~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r 400 (465)
|+||++|+++...|.+++|++++|+.||+|+.|.++++.+||||++|+||++|||+||. ..++|||+|+|
T Consensus 288 E~LR~~ppv~~~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H 357 (411)
T COG2124 288 ETLRLYPPVPLARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPH 357 (411)
T ss_pred HHHHhCCchhccceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999996 46999999999
Q ss_pred CCcChhHHHHHhHHHHHHHHhhccccCCCC
Q 012366 401 ICPGMLYGLANVEFPLAMLLYHFDWKLPNG 430 (465)
Q Consensus 401 ~C~G~~la~~~~~~~~~~ll~~~~~~~~~~ 430 (465)
.|+|+.||++|++++++.++++|++....+
T Consensus 358 ~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~ 387 (411)
T COG2124 358 RCLGAALARLELKVALAELLRRFPLLLLAE 387 (411)
T ss_pred cccCHHHHHHHHHHHHHHHHHhCchhhcCC
Confidence 999999999999999999999999987665
No 33
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=65.45 E-value=1.5 Score=36.71 Aligned_cols=43 Identities=19% Similarity=0.177 Sum_probs=30.5
Q ss_pred ChhHHHHHHhhcCCCCCCCCCCcccCCCceecCeeeCCCCEEEE
Q 012366 312 MKYLKLVVKETLRLRPSAPLIPRECGESCEINGFNIPVKARIIV 355 (465)
Q Consensus 312 lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~gt~v~~ 355 (465)
-..+.|||.|+.-+. ......-...+|+.++|..|||||.++-
T Consensus 52 ~n~I~A~V~~~qtv~-~Gs~vrlRLle~i~i~g~~IPkgt~l~G 94 (200)
T PF12508_consen 52 KNTIRAVVDGTQTVV-DGSRVRLRLLEDIQIGGILIPKGTYLYG 94 (200)
T ss_pred CCeEEEEEecceEEe-CCCEEEEEEcCceEECCEEeCCCCEEEE
Confidence 446778999987665 2222223347899999999999997654
No 34
>PF08492 SRP72: SRP72 RNA-binding domain; InterPro: IPR013699 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=62.70 E-value=6 Score=25.57 Aligned_cols=8 Identities=38% Similarity=0.767 Sum_probs=6.5
Q ss_pred CCCCCCCC
Q 012366 374 IPERFIDH 381 (465)
Q Consensus 374 ~P~R~~~~ 381 (465)
||||||+-
T Consensus 44 DPERWLP~ 51 (59)
T PF08492_consen 44 DPERWLPK 51 (59)
T ss_pred CccccCch
Confidence 89999864
No 35
>PHA03049 IMV membrane protein; Provisional
Probab=52.90 E-value=31 Score=22.66 Aligned_cols=9 Identities=56% Similarity=0.752 Sum_probs=3.7
Q ss_pred CCCCCCCCC
Q 012366 33 TTSNLPPGP 41 (465)
Q Consensus 33 ~~~~~pPgP 41 (465)
.....||-|
T Consensus 28 ~~q~~~p~~ 36 (68)
T PHA03049 28 TTSQNPPSQ 36 (68)
T ss_pred ccCCCCCCh
Confidence 333344443
No 36
>PF12554 MOZART1: Mitotic-spindle organizing gamma-tubulin ring associated; InterPro: IPR022214 This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important.
Probab=50.55 E-value=45 Score=20.55 Aligned_cols=42 Identities=21% Similarity=0.396 Sum_probs=31.9
Q ss_pred HHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHH
Q 012366 253 NIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEV 294 (465)
Q Consensus 253 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei 294 (465)
++...+..++=.|-+-.+-.++--+....-||+....+..|+
T Consensus 6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el 47 (48)
T PF12554_consen 6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL 47 (48)
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence 455556667777888888888888888888898888887776
No 37
>PF05952 ComX: Bacillus competence pheromone ComX; InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible. DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=49.45 E-value=17 Score=23.33 Aligned_cols=22 Identities=18% Similarity=0.259 Sum_probs=17.8
Q ss_pred HHHHHHHHhCchHHHHHHHHHH
Q 012366 274 DWAMCEMMKNPGVMKKAQAEVR 295 (465)
Q Consensus 274 ~~~l~~L~~~p~~~~~lr~Ei~ 295 (465)
.-++.+|..||++.+++.+.=.
T Consensus 3 Q~iV~YLv~nPevl~kl~~g~a 24 (57)
T PF05952_consen 3 QEIVNYLVQNPEVLEKLKEGEA 24 (57)
T ss_pred HHHHHHHHHChHHHHHHHcCCe
Confidence 4568899999999999987433
No 38
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=47.67 E-value=31 Score=21.27 Aligned_cols=19 Identities=21% Similarity=0.312 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 012366 7 TFQIFLAFLVFVFILLKLE 25 (465)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~ 25 (465)
++.+++.+++++.+++|.+
T Consensus 12 ~~~~v~~~~~F~gi~~w~~ 30 (49)
T PF05545_consen 12 SIGTVLFFVFFIGIVIWAY 30 (49)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444444444555555554
No 39
>PF15183 MRAP: Melanocortin-2 receptor accessory protein family
Probab=45.36 E-value=76 Score=22.03 Aligned_cols=10 Identities=20% Similarity=0.335 Sum_probs=5.3
Q ss_pred CCCCCCCCCC
Q 012366 33 TTSNLPPGPR 42 (465)
Q Consensus 33 ~~~~~pPgP~ 42 (465)
..+..+++|+
T Consensus 71 ~~k~~~~~p~ 80 (90)
T PF15183_consen 71 SEKHHPMCPW 80 (90)
T ss_pred ccccCCCCCc
Confidence 3444566665
No 40
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=43.97 E-value=11 Score=23.64 Aligned_cols=11 Identities=45% Similarity=0.918 Sum_probs=9.0
Q ss_pred ccCCCCCCCCc
Q 012366 393 IPFGAGRRICP 403 (465)
Q Consensus 393 ~~Fg~G~r~C~ 403 (465)
-+||-|+|.|-
T Consensus 12 ~kfg~GsrsC~ 22 (56)
T KOG3506|consen 12 RKFGQGSRSCR 22 (56)
T ss_pred cccCCCCccee
Confidence 36999999984
No 41
>PF15330 SIT: SHP2-interacting transmembrane adaptor protein, SIT
Probab=40.18 E-value=68 Score=23.87 Aligned_cols=11 Identities=36% Similarity=0.456 Sum_probs=8.5
Q ss_pred CCCcccccccc
Q 012366 43 KLPVIGNLHQL 53 (465)
Q Consensus 43 ~~p~lG~~~~~ 53 (465)
.-|+.||+...
T Consensus 45 ~~p~YgNL~~~ 55 (107)
T PF15330_consen 45 DDPCYGNLELQ 55 (107)
T ss_pred CCccccccccc
Confidence 58889997665
No 42
>PF14129 DUF4296: Domain of unknown function (DUF4296)
Probab=39.91 E-value=1.2e+02 Score=21.53 Aligned_cols=50 Identities=16% Similarity=0.097 Sum_probs=41.2
Q ss_pred CHHHHHHHHHHhhccCCcchHHHHHHHHHHHHhCchHHHHHHHHHHHHhc
Q 012366 250 STHNIKAVISDIFGAGSETSATTVDWAMCEMMKNPGVMKKAQAEVREVFN 299 (465)
Q Consensus 250 ~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~ 299 (465)
+.+.........++-=++.++....-.+.+-++||+..+++.+.+.+-+.
T Consensus 30 ~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL~ 79 (87)
T PF14129_consen 30 SSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERLE 79 (87)
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 34455556667788889999999999999999999999999998876543
No 43
>PF14483 Cut8_M: Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=38.25 E-value=49 Score=19.21 Aligned_cols=17 Identities=6% Similarity=0.366 Sum_probs=11.6
Q ss_pred HHHHHH-hCchHHHHHHH
Q 012366 276 AMCEMM-KNPGVMKKAQA 292 (465)
Q Consensus 276 ~l~~L~-~~p~~~~~lr~ 292 (465)
++..++ +||++++.++.
T Consensus 18 lL~~l~~~HPei~~~i~~ 35 (38)
T PF14483_consen 18 LLQSLCERHPEIQQEIRS 35 (38)
T ss_dssp HHHHHHHHSTHHHHHHHT
T ss_pred HHHHHHHhChhHHHHHHh
Confidence 334444 79999888775
No 44
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=37.83 E-value=11 Score=29.33 Aligned_cols=15 Identities=27% Similarity=0.607 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHHHH
Q 012366 10 IFLAFLVFVFILLKL 24 (465)
Q Consensus 10 ~~~~~~~~~~~~~~~ 24 (465)
+++++++++++++++
T Consensus 4 l~~iii~~i~l~~~~ 18 (130)
T PF12273_consen 4 LFAIIIVAILLFLFL 18 (130)
T ss_pred eHHHHHHHHHHHHHH
Confidence 344444444444333
No 45
>PRK06789 flagellar motor switch protein; Validated
Probab=37.35 E-value=33 Score=23.48 Aligned_cols=39 Identities=8% Similarity=0.089 Sum_probs=30.1
Q ss_pred HHhhcCCCCCCCCC-CcccCCC--ceecCeeeCCCCEEEEec
Q 012366 319 VKETLRLRPSAPLI-PRECGES--CEINGFNIPVKARIIVNS 357 (465)
Q Consensus 319 i~E~lRl~p~~~~~-~r~~~~~--~~i~g~~ip~gt~v~~~~ 357 (465)
++|-+.+.+..... -|.+.++ +.++|..|.+|..|.++-
T Consensus 22 i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~~ 63 (74)
T PRK06789 22 IEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKNG 63 (74)
T ss_pred HHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEECC
Confidence 68888999765554 7777665 555999999999988754
No 46
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=36.00 E-value=9.2 Score=35.95 Aligned_cols=44 Identities=16% Similarity=0.142 Sum_probs=31.5
Q ss_pred CChhHHHHHHhhcCCCCCCCCCCcccCCCceecCeeeCCCCEEEE
Q 012366 311 EMKYLKLVVKETLRLRPSAPLIPRECGESCEINGFNIPVKARIIV 355 (465)
Q Consensus 311 ~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~gt~v~~ 355 (465)
.-..+.|||.|+.-+. ......-...+|+.++|..||+||.|+-
T Consensus 254 ~~n~I~A~V~~~qtv~-~G~~vrlRLle~~~v~~~~ipkgt~l~g 297 (410)
T TIGR03779 254 ERNTIRACVHETQTVV-DGSAVKLRLLEPIQAGDLVIPKGTVLYG 297 (410)
T ss_pred CCCceEEEEcCceEEe-cCCEEEEEEcCceeeCCEEecCCCEEEE
Confidence 3456788999888776 2222222347899999999999997653
No 47
>PF05366 Sarcolipin: Sarcolipin; InterPro: IPR008028 Sarcolipin is a 31 amino acid integral membrane protein that regulates Ca-ATPase activity in skeletal muscle [].; GO: 0030234 enzyme regulator activity, 0016020 membrane; PDB: 1JDM_A.
Probab=30.92 E-value=65 Score=16.93 Aligned_cols=13 Identities=23% Similarity=0.291 Sum_probs=5.8
Q ss_pred HHHHHHHHHHhhc
Q 012366 15 LVFVFILLKLEKT 27 (465)
Q Consensus 15 ~~~~~~~~~~~~~ 27 (465)
+++..++.|+..+
T Consensus 15 vlitvilmwllvr 27 (31)
T PF05366_consen 15 VLITVILMWLLVR 27 (31)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH
Confidence 3344444555433
No 48
>PF06667 PspB: Phage shock protein B; InterPro: IPR009554 This family consists of several bacterial phage shock protein B (PspB) sequences. The phage shock protein (psp) operon is induced in response to heat, ethanol, osmotic shock and infection by filamentous bacteriophages []. Expression of the operon requires the alternative sigma factor sigma54 and the transcriptional activator PspF. In addition, PspA plays a negative regulatory role, and the integral-membrane proteins PspB and PspC play a positive one [].; GO: 0006355 regulation of transcription, DNA-dependent, 0009271 phage shock
Probab=29.13 E-value=1.1e+02 Score=21.06 Aligned_cols=6 Identities=33% Similarity=0.684 Sum_probs=2.5
Q ss_pred CChhHH
Q 012366 89 YGDCWR 94 (465)
Q Consensus 89 ~g~~w~ 94 (465)
+.+.|+
T Consensus 68 e~P~wR 73 (75)
T PF06667_consen 68 EHPNWR 73 (75)
T ss_pred CCCCcc
Confidence 344443
No 49
>COG3954 PrkB Phosphoribulokinase [Energy production and conversion]
Probab=27.63 E-value=1.6e+02 Score=24.62 Aligned_cols=64 Identities=13% Similarity=0.152 Sum_probs=40.3
Q ss_pred hccCCcchHHHHHHHHHHHHhCchHHH----------HHHHHHHHHhcCCCCcCc--cccCCChhHHHHHHhhcCC
Q 012366 262 FGAGSETSATTVDWAMCEMMKNPGVMK----------KAQAEVREVFNRKGKIDE--TGISEMKYLKLVVKETLRL 325 (465)
Q Consensus 262 ~~ag~~tt~~~l~~~l~~L~~~p~~~~----------~lr~Ei~~~~~~~~~~~~--~~~~~lp~l~a~i~E~lRl 325 (465)
-.||+.||+.+.-.++..+.-++.+.+ ..+.+|...-.+.+.+++ .+.++++.|+++..|=-|.
T Consensus 14 SGAGTTTts~aFrKiF~~~~I~aa~iEGDsFHR~tRpeMd~~Irkar~~GrhisyFgpeANdf~~LE~~f~eYg~~ 89 (289)
T COG3954 14 SGAGTTTTSLAFRKIFAQLNIHAAEVEGDSFHRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQTFIEYGQS 89 (289)
T ss_pred CCCCcccHHHHHHHHHHhcCccHhhhccccccccCchhHHHHHHHHHHcCCcceecCccccchHHHHHHHHHhccc
Confidence 358888888888888888776654432 233344443333444443 4456788888888875543
No 50
>PHA03162 hypothetical protein; Provisional
Probab=26.31 E-value=59 Score=24.86 Aligned_cols=25 Identities=20% Similarity=0.397 Sum_probs=20.0
Q ss_pred CCCCCCCcChhHHHHHhHHHHHHHH
Q 012366 396 GAGRRICPGMLYGLANVEFPLAMLL 420 (465)
Q Consensus 396 g~G~r~C~G~~la~~~~~~~~~~ll 420 (465)
++|.+.|||+.+.+-++..=|+.|=
T Consensus 2 ~~~~k~~pk~~~tmEeLaaeL~kLq 26 (135)
T PHA03162 2 AGGSKKCPKAQPTMEDLAAEIAKLQ 26 (135)
T ss_pred CCCcCCCCccCCCHHHHHHHHHHHH
Confidence 4699999999998888776666653
No 51
>PF13260 DUF4051: Protein of unknown function (DUF4051)
Probab=25.93 E-value=87 Score=18.99 Aligned_cols=16 Identities=13% Similarity=0.198 Sum_probs=7.0
Q ss_pred CCcchhHHHHHHHHHH
Q 012366 1 MELEFPTFQIFLAFLV 16 (465)
Q Consensus 1 ~~~~~~~~~~~~~~~~ 16 (465)
|.+.+++.++++++++
T Consensus 1 mfiawywivli~lv~~ 16 (54)
T PF13260_consen 1 MFIAWYWIVLIVLVVV 16 (54)
T ss_pred ChHHHHHHHHHHHHHH
Confidence 4444454444443333
No 52
>PF11227 DUF3025: Protein of unknown function (DUF3025); InterPro: IPR021390 Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function.
Probab=25.47 E-value=42 Score=28.31 Aligned_cols=19 Identities=26% Similarity=0.714 Sum_probs=16.9
Q ss_pred hcccCCCCCCCCCCCCCCC
Q 012366 359 ATGRDPMYWTQPESFIPER 377 (465)
Q Consensus 359 ~~~~d~~~~~~p~~F~P~R 377 (465)
.-|.|+.+|.|...|+|-|
T Consensus 193 ~~n~~~~FY~d~~~FRp~R 211 (212)
T PF11227_consen 193 PDNEDPAFYDDTDVFRPGR 211 (212)
T ss_pred CCCCCcccccCccccCCCC
Confidence 3488999999999999987
No 53
>PF09201 SRX: SRX; InterPro: IPR015284 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel. This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=24.80 E-value=71 Score=24.78 Aligned_cols=22 Identities=14% Similarity=0.261 Sum_probs=16.5
Q ss_pred CCCcChhHHHHHhHHHHHHHHh
Q 012366 400 RICPGMLYGLANVEFPLAMLLY 421 (465)
Q Consensus 400 r~C~G~~la~~~~~~~~~~ll~ 421 (465)
-.|.|+.||..++-.+|.+++.
T Consensus 18 yN~~gKKFsE~QiN~FIs~lIt 39 (148)
T PF09201_consen 18 YNCLGKKFSETQINAFISHLIT 39 (148)
T ss_dssp EETTS----HHHHHHHHHHHHH
T ss_pred ecccchHHHHHHHHHHHHHHhc
Confidence 3799999999999999999987
No 54
>TIGR02736 cbb3_Q_epsi cytochrome c oxidase, cbb3-type, CcoQ subunit, epsilon-Proteobacterial. Members of this protein family are restricted to the epsilon branch of the Proteobacteria. All members are found in operons containing the other three structural subunits of the cbb3 type of cytochrome c oxidase. These small proteins show remote sequence similarity to the CcoQ subunit in other cytochrome c oxidase systems, so this family is assumed to represent the epsilonproteobacterial variant of CcoQ.
Probab=24.70 E-value=1.4e+02 Score=19.00 Aligned_cols=19 Identities=16% Similarity=0.165 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHhhccC
Q 012366 11 FLAFLVFVFILLKLEKTSK 29 (465)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~ 29 (465)
+++++++++...++..++.
T Consensus 7 ~ti~lvv~LYgY~yhLYrs 25 (56)
T TIGR02736 7 FTLLLVIFLYAYIYHLYRS 25 (56)
T ss_pred HHHHHHHHHHHHHHHhhhh
Confidence 3344444444444444443
No 55
>PF11027 DUF2615: Protein of unknown function (DUF2615); InterPro: IPR020309 This entry represents a group of uncharacterised protein from the Metazoa, including CD034 (or C4orf34) and YQF4 (or C34C12.4).
Probab=22.70 E-value=1.8e+02 Score=21.40 Aligned_cols=23 Identities=22% Similarity=0.457 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHHHhhccCC
Q 012366 8 FQIFLAFLVFVFILLKLEKTSKT 30 (465)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~ 30 (465)
+.++++.+++++++++++....+
T Consensus 56 ~~~~~~w~~~A~~ly~~RP~s~R 78 (103)
T PF11027_consen 56 FMMMMLWMVLAMALYLLRPSSLR 78 (103)
T ss_pred HHHHHHHHHHHHHHHHcCchhhc
Confidence 33344444444444555444433
No 56
>PF07886 BA14K: BA14K-like protein; InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process [].
Probab=22.39 E-value=82 Score=17.35 Aligned_cols=14 Identities=36% Similarity=0.843 Sum_probs=11.8
Q ss_pred cccccCCCCCCCCc
Q 012366 390 FEYIPFGAGRRICP 403 (465)
Q Consensus 390 ~~~~~Fg~G~r~C~ 403 (465)
..|+++++..|.|.
T Consensus 18 ~Ty~~~~G~r~~C~ 31 (31)
T PF07886_consen 18 NTYQPYDGPRRFCR 31 (31)
T ss_pred CcEeCCCCccccCc
Confidence 46999998899994
No 57
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=22.37 E-value=97 Score=22.25 Aligned_cols=28 Identities=21% Similarity=0.340 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHhCchHHHHHHHHHHHHh
Q 012366 271 TTVDWAMCEMMKNPGVMKKAQAEVREVF 298 (465)
Q Consensus 271 ~~l~~~l~~L~~~p~~~~~lr~Ei~~~~ 298 (465)
.++.|.++..-..||..+.|++||+++-
T Consensus 54 ~~lgy~v~tFnDcpeA~~eL~~eI~eAK 81 (91)
T PF08285_consen 54 FTLGYGVATFNDCPEAAKELQKEIKEAK 81 (91)
T ss_pred HHHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence 3455666666677999999999999874
No 58
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=22.37 E-value=99 Score=18.38 Aligned_cols=19 Identities=11% Similarity=0.282 Sum_probs=15.0
Q ss_pred HHHHHHHHhCchHHHHHHH
Q 012366 274 DWAMCEMMKNPGVMKKAQA 292 (465)
Q Consensus 274 ~~~l~~L~~~p~~~~~lr~ 292 (465)
.|-++.++++||+|.-|.-
T Consensus 13 l~gl~~~l~DpdvqrgL~~ 31 (42)
T PF07849_consen 13 LFGLLRALRDPDVQRGLGF 31 (42)
T ss_pred HHHHHHHHcCHHHHHHHHH
Confidence 4667788999999988764
No 59
>cd04518 TBP_archaea archaeal TATA box binding protein (TBP): TBPs are transcription factors present in archaea and eukaryotes, that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=22.09 E-value=40 Score=27.70 Aligned_cols=35 Identities=17% Similarity=0.508 Sum_probs=24.9
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccCCCCCCCCcCh
Q 012366 371 ESFIPERFIDHSVDFKGSNFEYIPFGAGRRICPGM 405 (465)
Q Consensus 371 ~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~ 405 (465)
-+|+|+||-.---....+....+-|+.|+=.|.|-
T Consensus 29 ~eY~P~~fpgli~Rl~~Pk~t~lIF~SGKiv~tGa 63 (174)
T cd04518 29 AEYNPDQFPGLVYRLEDPKIAALIFRSGKMVCTGA 63 (174)
T ss_pred cEECCCcCcEEEEEccCCcEEEEEECCCeEEEEcc
Confidence 58999998532211223445799999999999987
No 60
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=21.54 E-value=26 Score=28.29 Aligned_cols=50 Identities=18% Similarity=0.344 Sum_probs=31.0
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccCCCCCCCCcChhHHHHHhHHHHHHHHh
Q 012366 371 ESFIPERFIDHSVDFKGSNFEYIPFGAGRRICPGMLYGLANVEFPLAMLLY 421 (465)
Q Consensus 371 ~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~ 421 (465)
-+|||++|-+=--....+....+-|..|+-.|-|..= .-.++.++..++.
T Consensus 35 aeYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaKs-~ed~~~av~~~~~ 84 (185)
T COG2101 35 AEYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAKS-VEDVHRAVKKLAK 84 (185)
T ss_pred CccCHhHCCeeEEEecCCcceEEEEecCcEEEeccCc-HHHHHHHHHHHHH
Confidence 4789999843111112244579999999999999763 3344444444444
No 61
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=21.34 E-value=1.5e+02 Score=16.16 Aligned_cols=8 Identities=25% Similarity=-0.085 Sum_probs=3.2
Q ss_pred CCcchhHH
Q 012366 1 MELEFPTF 8 (465)
Q Consensus 1 ~~~~~~~~ 8 (465)
||...+.+
T Consensus 1 MEal~Ytf 8 (31)
T PRK11875 1 MESFAYIL 8 (31)
T ss_pred ChhHHHHH
Confidence 44433333
No 62
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=20.50 E-value=72 Score=25.10 Aligned_cols=38 Identities=16% Similarity=0.426 Sum_probs=29.8
Q ss_pred HHHHHhCchHHHHHHHHHHHHhcCCCCcCccccCCChh
Q 012366 277 MCEMMKNPGVMKKAQAEVREVFNRKGKIDETGISEMKY 314 (465)
Q Consensus 277 l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~lp~ 314 (465)
+-.++++|++-+.+.++|+..+..++.+++-|.-.+.|
T Consensus 115 i~~iL~~p~V~~~~K~~i~~i~~~Kgei~FYDVy~la~ 152 (155)
T PF10777_consen 115 IDKILQSPQVPDEIKQGIQRIISTKGEISFYDVYSLAY 152 (155)
T ss_pred HHHHHcCCCCCHHHHHHHHHHHHhCCceeEEEeEEeec
Confidence 44567899999999999999998887787766554443
No 63
>PRK13467 F0F1 ATP synthase subunit C; Provisional
Probab=20.28 E-value=1.4e+02 Score=19.88 Aligned_cols=24 Identities=4% Similarity=0.064 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHhCchHHHHHHHH
Q 012366 270 ATTVDWAMCEMMKNPGVMKKAQAE 293 (465)
Q Consensus 270 ~~~l~~~l~~L~~~p~~~~~lr~E 293 (465)
....+..+--++|+||.+.+++.-
T Consensus 20 G~v~~~a~e~iaRqPE~~~~i~~~ 43 (66)
T PRK13467 20 GFLMANLFKSAARQPEMIGQLRSL 43 (66)
T ss_pred HHHHHHHHHHHHcChhHHHhHHHH
Confidence 456677888899999999998864
Done!