Query 012368
Match_columns 465
No_of_seqs 389 out of 2374
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 01:54:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012368.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012368hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG4992 ArgD Ornithine/acetylo 100.0 4.7E-86 1E-90 626.0 43.6 394 61-462 5-401 (404)
2 COG0160 GabT 4-aminobutyrate a 100.0 1.7E-76 3.6E-81 578.3 42.7 390 61-460 17-446 (447)
3 COG0001 HemL Glutamate-1-semia 100.0 3E-74 6.5E-79 551.2 38.0 399 39-462 4-431 (432)
4 KOG1402 Ornithine aminotransfe 100.0 9.1E-74 2E-78 517.3 32.8 394 61-458 22-426 (427)
5 COG0161 BioA Adenosylmethionin 100.0 2.8E-70 6.1E-75 530.6 38.4 390 69-463 9-447 (449)
6 PRK07482 hypothetical protein; 100.0 2.7E-69 5.9E-74 546.8 45.0 380 80-462 32-457 (461)
7 PRK05965 hypothetical protein; 100.0 3.9E-69 8.4E-74 545.4 43.3 381 80-465 28-453 (459)
8 PRK07678 aminotransferase; Val 100.0 8.3E-69 1.8E-73 542.4 45.0 379 80-461 29-451 (451)
9 PRK11522 putrescine--2-oxoglut 100.0 1.3E-68 2.9E-73 539.8 42.6 379 78-462 61-454 (459)
10 TIGR03372 putres_am_tran putre 100.0 1.6E-68 3.5E-73 535.4 40.3 371 81-457 58-442 (442)
11 PRK06943 adenosylmethionine--8 100.0 6.4E-68 1.4E-72 535.1 44.7 397 61-463 10-450 (453)
12 KOG1404 Alanine-glyoxylate ami 100.0 6.6E-69 1.4E-73 497.4 33.3 369 76-453 28-432 (442)
13 PRK06938 diaminobutyrate--2-ox 100.0 7.6E-68 1.6E-72 535.5 44.0 377 74-460 38-461 (464)
14 PRK07483 hypothetical protein; 100.0 1.1E-67 2.4E-72 532.5 43.3 384 76-462 8-440 (443)
15 PRK06062 hypothetical protein; 100.0 2.6E-67 5.6E-72 531.0 43.6 384 66-461 17-447 (451)
16 PRK08742 adenosylmethionine--8 100.0 3.9E-67 8.5E-72 530.2 44.8 377 81-463 47-471 (472)
17 PRK06058 4-aminobutyrate amino 100.0 3.7E-67 8.1E-72 530.7 44.5 373 79-460 37-443 (443)
18 PRK07481 hypothetical protein; 100.0 2.3E-67 4.9E-72 531.6 42.8 377 80-461 24-447 (449)
19 PRK06931 diaminobutyrate--2-ox 100.0 9.5E-67 2.1E-71 527.4 44.9 390 62-461 19-456 (459)
20 PRK04612 argD acetylornithine 100.0 1.3E-66 2.9E-71 519.8 45.4 383 76-461 18-405 (408)
21 PRK06105 aminotransferase; Pro 100.0 1E-66 2.2E-71 527.9 45.1 393 63-461 6-451 (460)
22 PRK07495 4-aminobutyrate amino 100.0 1.7E-66 3.7E-71 521.7 45.5 379 74-461 15-423 (425)
23 PRK05639 4-aminobutyrate amino 100.0 1.4E-66 3E-71 525.4 44.7 373 79-461 34-445 (457)
24 PRK07030 adenosylmethionine--8 100.0 1.1E-66 2.5E-71 527.2 43.9 374 81-460 30-447 (466)
25 PRK07480 putative aminotransfe 100.0 1.7E-66 3.7E-71 525.2 43.7 377 80-462 32-451 (456)
26 KOG1401 Acetylornithine aminot 100.0 2.8E-67 6.1E-72 490.5 34.8 402 48-461 15-432 (433)
27 TIGR03246 arg_catab_astC succi 100.0 3.1E-66 6.7E-71 518.7 44.9 381 75-460 12-396 (397)
28 PRK06916 adenosylmethionine--8 100.0 1.5E-66 3.2E-71 526.8 42.7 378 79-462 37-458 (460)
29 PLN00144 acetylornithine trans 100.0 2.1E-66 4.5E-71 515.9 42.8 377 84-460 1-381 (382)
30 PRK08593 4-aminobutyrate amino 100.0 4.7E-66 1E-70 521.5 44.5 390 63-462 5-432 (445)
31 PRK07036 hypothetical protein; 100.0 5.7E-66 1.2E-70 522.7 44.6 376 80-461 33-454 (466)
32 PLN02760 4-aminobutyrate:pyruv 100.0 3.3E-66 7.2E-71 526.9 42.8 377 79-461 70-493 (504)
33 PLN02482 glutamate-1-semialdeh 100.0 4.8E-66 1E-70 521.3 43.0 396 39-459 50-473 (474)
34 TIGR00709 dat 2,4-diaminobutyr 100.0 5.3E-66 1.1E-70 521.7 42.8 374 79-462 20-438 (442)
35 PRK12403 putative aminotransfe 100.0 1.8E-65 3.9E-70 518.8 45.0 377 80-462 36-455 (460)
36 PRK12381 bifunctional succinyl 100.0 3.5E-65 7.6E-70 512.6 45.5 382 77-463 18-403 (406)
37 PRK07046 aminotransferase; Val 100.0 1.4E-65 3E-70 517.6 42.3 394 39-461 27-452 (453)
38 PRK06541 hypothetical protein; 100.0 3.3E-65 7.2E-70 516.3 45.2 394 65-462 12-458 (460)
39 PRK12389 glutamate-1-semialdeh 100.0 1.6E-65 3.5E-70 516.5 42.5 397 38-459 2-427 (428)
40 PRK04013 argD acetylornithine/ 100.0 3.9E-65 8.4E-70 499.7 41.5 359 78-461 4-362 (364)
41 PRK06917 hypothetical protein; 100.0 5E-65 1.1E-69 513.8 43.2 381 79-463 13-441 (447)
42 PRK06082 4-aminobutyrate amino 100.0 8.1E-65 1.7E-69 513.4 44.7 372 79-463 53-455 (459)
43 PRK06173 adenosylmethionine--8 100.0 6.7E-65 1.5E-69 509.7 41.7 374 82-461 28-427 (429)
44 PRK13360 omega amino acid--pyr 100.0 9.5E-65 2.1E-69 511.0 42.6 377 78-460 26-441 (442)
45 PRK03715 argD acetylornithine 100.0 9.8E-65 2.1E-69 505.2 42.2 376 77-460 15-394 (395)
46 PRK06777 4-aminobutyrate amino 100.0 2.1E-64 4.5E-69 507.4 44.9 369 81-458 23-420 (421)
47 PRK07986 adenosylmethionine--8 100.0 1.1E-64 2.4E-69 507.4 40.6 372 81-459 26-423 (428)
48 PRK08117 4-aminobutyrate amino 100.0 3E-64 6.6E-69 509.6 44.3 373 81-462 26-432 (433)
49 PRK05630 adenosylmethionine--8 100.0 1.5E-64 3.2E-69 506.7 41.5 374 79-459 21-420 (422)
50 PRK05769 4-aminobutyrate amino 100.0 4.3E-64 9.3E-69 506.6 45.1 386 63-460 18-440 (441)
51 PRK09792 4-aminobutyrate trans 100.0 3.4E-64 7.4E-69 505.8 43.8 376 74-458 15-420 (421)
52 PRK09221 beta alanine--pyruvat 100.0 2.2E-64 4.8E-69 508.8 42.5 377 78-460 29-444 (445)
53 PLN02624 ornithine-delta-amino 100.0 9.8E-64 2.1E-68 508.5 46.3 408 50-459 27-444 (474)
54 PRK06918 4-aminobutyrate amino 100.0 8.4E-64 1.8E-68 507.8 45.6 394 61-463 16-447 (451)
55 TIGR00700 GABAtrnsam 4-aminobu 100.0 4.1E-64 8.9E-69 506.3 42.9 372 78-458 13-419 (420)
56 PRK08360 4-aminobutyrate amino 100.0 1E-63 2.2E-68 503.7 45.6 388 64-462 5-429 (443)
57 TIGR02407 ectoine_ectB diamino 100.0 4E-64 8.7E-69 504.0 40.5 376 74-459 10-412 (412)
58 PRK00615 glutamate-1-semialdeh 100.0 1E-63 2.2E-68 500.7 42.1 395 40-460 5-429 (433)
59 PRK05964 adenosylmethionine--8 100.0 2.9E-63 6.2E-68 501.0 43.0 376 79-460 23-423 (423)
60 PRK09264 diaminobutyrate--2-ox 100.0 3.3E-63 7.2E-68 499.7 42.0 379 74-462 14-419 (425)
61 PRK01278 argD acetylornithine 100.0 9E-63 1.9E-67 493.9 44.7 379 77-460 10-389 (389)
62 PRK04073 rocD ornithine--oxo-a 100.0 6.7E-63 1.4E-67 495.3 43.8 389 63-457 5-395 (396)
63 PRK06148 hypothetical protein; 100.0 1.1E-62 2.4E-67 538.0 45.1 385 63-460 586-1011(1013)
64 PRK05093 argD bifunctional N-s 100.0 4.5E-61 9.8E-66 483.2 45.8 380 76-460 18-401 (403)
65 TIGR00699 GABAtrns_euk 4-amino 100.0 1.4E-61 3E-66 485.6 41.5 389 61-457 21-464 (464)
66 TIGR00713 hemL glutamate-1-sem 100.0 1.1E-60 2.4E-65 483.7 39.0 394 42-460 2-423 (423)
67 PRK02936 argD acetylornithine 100.0 8.9E-60 1.9E-64 470.6 43.0 370 77-457 8-377 (377)
68 PRK08297 L-lysine aminotransfe 100.0 1.7E-60 3.8E-65 480.2 37.7 376 79-460 25-442 (443)
69 TIGR00508 bioA adenosylmethion 100.0 9.6E-60 2.1E-64 473.6 42.5 373 81-459 28-426 (427)
70 PRK03244 argD acetylornithine 100.0 2.7E-59 5.8E-64 470.4 44.1 376 72-461 17-396 (398)
71 PRK06149 hypothetical protein; 100.0 1.3E-59 2.7E-64 514.1 44.7 387 61-459 545-970 (972)
72 PRK02627 acetylornithine amino 100.0 2.2E-58 4.8E-63 463.9 45.1 386 69-460 10-395 (396)
73 PRK00062 glutamate-1-semialdeh 100.0 4.8E-59 1E-63 470.0 39.7 395 41-460 3-425 (426)
74 TIGR01885 Orn_aminotrans ornit 100.0 3.7E-58 8.1E-63 462.0 43.3 390 64-457 3-400 (401)
75 PF00202 Aminotran_3: Aminotra 100.0 1.2E-59 2.7E-64 459.6 30.4 321 83-406 1-337 (339)
76 PRK08088 4-aminobutyrate amino 100.0 9.6E-58 2.1E-62 461.1 44.6 373 79-460 22-424 (425)
77 TIGR03251 LAT_fam L-lysine 6-t 100.0 6.9E-59 1.5E-63 468.4 35.5 371 79-455 18-430 (431)
78 PLN02974 adenosylmethionine-8- 100.0 4.4E-58 9.6E-63 484.4 43.1 394 62-457 314-816 (817)
79 PTZ00125 ornithine aminotransf 100.0 1.8E-57 4E-62 457.7 43.6 388 74-463 7-399 (400)
80 PRK00854 rocD ornithine--oxo-a 100.0 2.6E-57 5.7E-62 456.4 43.8 391 63-458 6-400 (401)
81 PRK04260 acetylornithine amino 100.0 3.5E-56 7.6E-61 443.9 43.0 367 77-456 8-374 (375)
82 PRK06209 glutamate-1-semialdeh 100.0 1.6E-55 3.5E-60 443.8 38.5 384 42-461 1-407 (431)
83 cd00610 OAT_like Acetyl ornith 100.0 6.4E-55 1.4E-59 441.3 42.4 369 79-457 17-413 (413)
84 KOG1403 Predicted alanine-glyo 100.0 9.9E-55 2.1E-59 388.9 25.1 385 64-461 9-439 (452)
85 TIGR00707 argD acetylornithine 100.0 8E-53 1.7E-57 421.2 41.8 375 76-457 5-379 (379)
86 KOG1405 4-aminobutyrate aminot 100.0 5.3E-43 1.1E-47 320.0 26.1 395 53-459 34-483 (484)
87 PRK07505 hypothetical protein; 100.0 9.4E-40 2E-44 328.6 33.3 365 62-459 8-399 (402)
88 PLN02822 serine palmitoyltrans 100.0 6.3E-38 1.4E-42 319.5 34.0 341 82-461 94-479 (481)
89 PRK13393 5-aminolevulinate syn 100.0 3.6E-34 7.8E-39 288.5 34.1 328 96-460 43-397 (406)
90 TIGR01821 5aminolev_synth 5-am 100.0 2.4E-33 5.1E-38 282.4 34.5 328 96-460 43-397 (402)
91 PRK09064 5-aminolevulinate syn 100.0 5.6E-33 1.2E-37 280.2 33.5 328 97-461 45-399 (407)
92 PRK07179 hypothetical protein; 100.0 1.4E-32 3E-37 277.1 33.7 339 73-460 37-399 (407)
93 PRK05958 8-amino-7-oxononanoat 100.0 3.3E-32 7.3E-37 272.8 34.8 337 82-457 24-385 (385)
94 COG0436 Aspartate/tyrosine/aro 100.0 3.3E-32 7.2E-37 270.1 30.7 339 98-460 28-392 (393)
95 TIGR01825 gly_Cac_T_rel pyrido 100.0 1.3E-31 2.9E-36 268.5 33.2 342 79-460 15-382 (385)
96 PLN03227 serine palmitoyltrans 100.0 1E-31 2.2E-36 268.2 32.0 327 101-461 1-384 (392)
97 PRK06939 2-amino-3-ketobutyrat 100.0 2.5E-31 5.4E-36 267.6 34.8 342 81-460 25-394 (397)
98 TIGR01822 2am3keto_CoA 2-amino 100.0 3.6E-31 7.8E-36 266.0 33.9 344 79-460 19-390 (393)
99 COG0156 BioF 7-keto-8-aminopel 100.0 3.2E-31 6.8E-36 257.6 30.1 327 89-456 31-387 (388)
100 PLN02955 8-amino-7-oxononanoat 100.0 6.5E-31 1.4E-35 261.1 29.6 336 96-460 100-462 (476)
101 TIGR00858 bioF 8-amino-7-oxono 100.0 7.9E-30 1.7E-34 253.2 31.3 330 85-454 4-360 (360)
102 PRK13392 5-aminolevulinate syn 100.0 2.8E-29 6.1E-34 253.3 33.4 329 96-460 44-398 (410)
103 PRK03317 histidinol-phosphate 100.0 5.8E-29 1.3E-33 247.6 29.3 324 99-459 27-364 (368)
104 PRK06207 aspartate aminotransf 100.0 2.6E-28 5.7E-33 245.5 32.1 342 98-461 39-404 (405)
105 PRK06225 aspartate aminotransf 100.0 2.1E-28 4.6E-33 244.6 31.2 336 97-462 27-379 (380)
106 PRK01533 histidinol-phosphate 100.0 3.6E-29 7.8E-34 248.0 25.3 324 96-461 27-357 (366)
107 PRK03158 histidinol-phosphate 100.0 1.2E-28 2.5E-33 244.7 28.4 319 99-456 30-358 (359)
108 COG0079 HisC Histidinol-phosph 100.0 1.7E-28 3.7E-33 239.4 28.7 320 99-459 23-354 (356)
109 COG1168 MalY Bifunctional PLP- 100.0 6.2E-28 1.3E-32 225.8 29.8 348 87-460 12-387 (388)
110 PRK07682 hypothetical protein; 100.0 3.1E-28 6.7E-33 243.3 28.6 335 99-460 21-377 (378)
111 PRK07681 aspartate aminotransf 100.0 5.7E-28 1.2E-32 243.0 30.4 333 97-455 31-384 (399)
112 PRK07324 transaminase; Validat 100.0 2.2E-28 4.8E-33 243.4 26.8 340 92-460 20-371 (373)
113 PLN02483 serine palmitoyltrans 100.0 1.5E-27 3.3E-32 243.8 32.6 328 95-460 97-467 (489)
114 PRK08153 histidinol-phosphate 100.0 4.9E-28 1.1E-32 240.7 28.2 323 99-462 33-368 (369)
115 PRK15481 transcriptional regul 100.0 6.6E-28 1.4E-32 244.8 28.7 333 99-458 86-430 (431)
116 PRK08960 hypothetical protein; 100.0 1.7E-27 3.6E-32 238.7 31.2 335 97-458 31-386 (387)
117 PRK07366 succinyldiaminopimela 100.0 1.1E-27 2.3E-32 240.2 29.0 335 96-456 28-387 (388)
118 PRK06290 aspartate aminotransf 100.0 1.5E-27 3.3E-32 239.7 30.0 340 96-461 42-407 (410)
119 PRK09147 succinyldiaminopimela 100.0 2E-27 4.4E-32 238.8 30.6 335 96-458 27-395 (396)
120 PRK05937 8-amino-7-oxononanoat 100.0 3.7E-27 8.1E-32 234.5 31.7 321 98-463 4-354 (370)
121 PLN00175 aminotransferase fami 100.0 2.7E-27 5.8E-32 238.5 30.5 332 99-458 55-412 (413)
122 PRK06108 aspartate aminotransf 100.0 5.2E-27 1.1E-31 235.0 32.2 334 99-458 25-381 (382)
123 PLN00145 tyrosine/nicotianamin 100.0 6.8E-27 1.5E-31 236.4 32.0 344 97-463 51-428 (430)
124 PRK14809 histidinol-phosphate 100.0 3.1E-27 6.6E-32 234.3 28.5 322 96-458 28-356 (357)
125 PRK09148 aminotransferase; Val 100.0 8.6E-27 1.9E-31 234.6 31.2 340 96-461 28-392 (405)
126 PRK02731 histidinol-phosphate 100.0 6E-27 1.3E-31 233.2 29.3 324 96-458 30-365 (367)
127 PLN02187 rooty/superroot1 100.0 9E-27 2E-31 237.1 30.9 344 96-462 64-441 (462)
128 PLN00143 tyrosine/nicotianamin 100.0 1.4E-26 3E-31 233.3 31.8 343 95-463 29-408 (409)
129 PRK08068 transaminase; Reviewe 100.0 9.4E-27 2E-31 233.4 30.0 332 97-455 31-385 (389)
130 PRK05664 threonine-phosphate d 100.0 7.6E-27 1.6E-31 228.6 28.4 308 98-459 20-328 (330)
131 PRK08056 threonine-phosphate d 100.0 1.1E-26 2.4E-31 230.0 29.7 327 95-458 17-354 (356)
132 PRK13355 bifunctional HTH-doma 100.0 7.9E-27 1.7E-31 241.6 29.9 341 95-461 143-516 (517)
133 PRK06348 aspartate aminotransf 100.0 1.8E-26 4E-31 230.8 30.6 331 99-455 30-381 (384)
134 PTZ00433 tyrosine aminotransfe 100.0 1.9E-26 4.1E-31 232.7 30.6 346 92-461 27-410 (412)
135 cd06454 KBL_like KBL_like; thi 100.0 2.3E-26 4.9E-31 227.5 29.8 321 98-456 1-348 (349)
136 PLN02656 tyrosine transaminase 100.0 4.2E-26 9E-31 229.9 32.2 342 96-460 29-404 (409)
137 COG1167 ARO8 Transcriptional r 100.0 3E-26 6.5E-31 232.5 31.3 341 95-461 86-457 (459)
138 PRK09105 putative aminotransfe 100.0 1.9E-26 4.2E-31 229.0 29.3 318 98-457 43-368 (370)
139 PRK06358 threonine-phosphate d 100.0 3.1E-26 6.8E-31 226.5 30.7 322 98-457 19-353 (354)
140 TIGR03540 DapC_direct LL-diami 100.0 2.7E-26 5.8E-31 229.8 30.2 333 96-455 27-382 (383)
141 PRK06959 putative threonine-ph 100.0 1.9E-26 4E-31 226.4 28.5 309 98-462 24-336 (339)
142 TIGR03537 DapC succinyldiamino 100.0 3E-26 6.5E-31 226.5 30.1 330 99-455 1-349 (350)
143 PRK09276 LL-diaminopimelate am 100.0 2.7E-26 5.9E-31 229.9 29.8 332 97-455 30-384 (385)
144 PRK00950 histidinol-phosphate 100.0 1.6E-26 3.5E-31 229.6 27.2 319 95-457 31-360 (361)
145 PRK05764 aspartate aminotransf 100.0 3.1E-26 6.8E-31 230.2 29.4 338 97-460 30-392 (393)
146 PLN03026 histidinol-phosphate 100.0 2.8E-26 6E-31 228.8 28.6 320 96-456 50-379 (380)
147 TIGR03538 DapC_gpp succinyldia 100.0 3.6E-26 7.7E-31 229.5 29.4 335 94-456 24-392 (393)
148 PRK06107 aspartate aminotransf 100.0 6.4E-26 1.4E-30 228.2 31.0 338 97-460 32-401 (402)
149 PRK02610 histidinol-phosphate 100.0 3.4E-26 7.3E-31 228.0 28.7 326 98-460 28-372 (374)
150 PRK12414 putative aminotransfe 100.0 4.4E-26 9.5E-31 228.0 29.4 327 99-455 30-383 (384)
151 PRK05957 aspartate aminotransf 100.0 1E-25 2.3E-30 225.7 32.0 336 100-462 29-388 (389)
152 KOG1359 Glycine C-acetyltransf 100.0 2E-26 4.4E-31 206.7 23.7 336 81-460 49-413 (417)
153 PRK06855 aminotransferase; Val 100.0 5E-26 1.1E-30 230.6 29.9 341 97-460 31-430 (433)
154 PRK05387 histidinol-phosphate 100.0 3.6E-26 7.7E-31 226.4 27.8 322 97-458 23-352 (353)
155 TIGR01141 hisC histidinol-phos 100.0 2.8E-26 6.2E-31 226.5 26.7 317 98-453 19-345 (346)
156 PRK05942 aspartate aminotransf 100.0 8.3E-26 1.8E-30 226.9 30.4 332 97-455 34-388 (394)
157 PRK07865 N-succinyldiaminopime 100.0 8E-26 1.7E-30 224.7 29.9 320 96-454 25-363 (364)
158 TIGR01264 tyr_amTase_E tyrosin 100.0 6.4E-26 1.4E-30 228.3 29.3 340 97-460 30-400 (401)
159 PRK08361 aspartate aminotransf 100.0 5.6E-26 1.2E-30 227.9 28.6 337 99-459 34-390 (391)
160 PRK04870 histidinol-phosphate 100.0 4.3E-26 9.3E-31 226.0 27.0 322 97-457 25-356 (356)
161 PRK08636 aspartate aminotransf 100.0 1.3E-25 2.9E-30 226.0 30.8 340 96-461 31-402 (403)
162 PRK08363 alanine aminotransfer 100.0 2.3E-25 5.1E-30 224.0 32.2 340 96-460 28-395 (398)
163 TIGR03539 DapC_actino succinyl 100.0 1.1E-25 2.3E-30 223.1 29.3 319 96-453 19-356 (357)
164 PRK08912 hypothetical protein; 100.0 1.2E-25 2.6E-30 225.3 29.8 332 99-459 27-386 (387)
165 PRK05839 hypothetical protein; 99.9 8.1E-26 1.8E-30 225.2 28.1 329 96-458 22-373 (374)
166 PRK07337 aminotransferase; Val 99.9 1.4E-25 2.9E-30 225.0 29.3 333 98-457 30-387 (388)
167 PRK07550 hypothetical protein; 99.9 1.1E-25 2.3E-30 225.6 28.5 336 96-456 27-384 (386)
168 PRK07683 aminotransferase A; V 99.9 2.8E-25 6E-30 222.5 31.4 334 98-459 28-383 (387)
169 PRK09082 methionine aminotrans 99.9 2.2E-25 4.9E-30 223.1 29.9 330 99-455 31-385 (386)
170 PRK05166 histidinol-phosphate 99.9 2.3E-25 5E-30 221.9 28.4 323 97-457 35-369 (371)
171 PRK07309 aromatic amino acid a 99.9 5.2E-25 1.1E-29 220.8 30.8 335 98-461 30-390 (391)
172 KOG0257 Kynurenine aminotransf 99.9 5.1E-26 1.1E-30 215.1 21.6 320 115-454 45-414 (420)
173 PRK14807 histidinol-phosphate 99.9 5.3E-25 1.2E-29 217.6 29.7 318 100-457 24-350 (351)
174 PRK14808 histidinol-phosphate 99.9 2.6E-25 5.5E-30 218.1 27.2 319 86-455 7-333 (335)
175 PRK08175 aminotransferase; Val 99.9 6.6E-25 1.4E-29 220.4 30.0 334 97-459 28-389 (395)
176 PRK09440 avtA valine--pyruvate 99.9 5.6E-25 1.2E-29 222.6 29.6 347 99-464 31-416 (416)
177 PRK07568 aspartate aminotransf 99.9 1.5E-24 3.3E-29 218.2 32.2 339 98-462 30-395 (397)
178 PRK06425 histidinol-phosphate 99.9 3.4E-25 7.4E-30 217.2 26.5 286 135-457 35-331 (332)
179 PRK07777 aminotransferase; Val 99.9 9.6E-25 2.1E-29 218.8 30.4 333 99-457 25-384 (387)
180 PRK07392 threonine-phosphate d 99.9 1.4E-24 3E-29 215.4 30.4 322 98-457 22-357 (360)
181 PRK01688 histidinol-phosphate 99.9 1.5E-25 3.2E-30 221.4 23.1 311 100-453 30-350 (351)
182 TIGR01140 L_thr_O3P_dcar L-thr 99.9 6.6E-25 1.4E-29 215.0 27.4 302 98-453 17-329 (330)
183 TIGR01265 tyr_nico_aTase tyros 99.9 1.9E-24 4.1E-29 217.6 31.2 340 96-459 29-401 (403)
184 PRK07590 L,L-diaminopimelate a 99.9 1.1E-24 2.3E-29 219.9 29.1 338 97-457 33-409 (409)
185 PF00155 Aminotran_1_2: Aminot 99.9 4.3E-25 9.3E-30 219.6 25.5 325 99-453 2-363 (363)
186 PRK09265 aminotransferase AlaT 99.9 2E-24 4.3E-29 217.7 30.4 342 96-461 31-403 (404)
187 PRK08354 putative aminotransfe 99.9 4.4E-24 9.6E-29 207.4 31.7 300 96-456 6-309 (311)
188 PTZ00377 alanine aminotransfer 99.9 8.7E-25 1.9E-29 224.5 27.9 326 116-462 90-478 (481)
189 PLN02672 methionine S-methyltr 99.9 1.5E-24 3.2E-29 233.1 30.5 340 91-458 690-1079(1082)
190 PRK03321 putative aminotransfe 99.9 6.7E-25 1.5E-29 217.2 24.8 321 99-458 23-350 (352)
191 TIGR03576 pyridox_MJ0158 pyrid 99.9 4.5E-24 9.7E-29 209.2 28.7 297 115-457 34-345 (346)
192 PLN02721 threonine aldolase 99.9 7.7E-24 1.7E-28 209.7 28.4 327 99-459 6-352 (353)
193 PRK06836 aspartate aminotransf 99.9 1.9E-23 4E-28 209.8 31.2 332 98-461 33-393 (394)
194 TIGR03542 DAPAT_plant LL-diami 99.9 8.9E-24 1.9E-28 212.7 27.9 337 97-456 32-401 (402)
195 PLN02450 1-aminocyclopropane-1 99.9 5.8E-24 1.3E-28 216.9 26.7 301 140-461 90-432 (468)
196 PRK03967 histidinol-phosphate 99.9 1.1E-23 2.3E-28 206.9 27.4 312 96-458 16-333 (337)
197 KOG0259 Tyrosine aminotransfer 99.9 6.3E-23 1.4E-27 190.8 30.5 340 98-462 61-436 (447)
198 PTZ00376 aspartate aminotransf 99.9 7.5E-24 1.6E-28 213.3 25.4 293 140-459 76-403 (404)
199 PLN02231 alanine transaminase 99.9 9.3E-24 2E-28 217.4 26.4 325 117-462 143-530 (534)
200 TIGR03392 FeS_syn_CsdA cystein 99.9 7.9E-23 1.7E-27 205.7 32.5 331 97-460 16-396 (398)
201 PRK09275 aspartate aminotransf 99.9 4.7E-24 1E-28 216.8 23.1 339 100-462 102-520 (527)
202 PLN02376 1-aminocyclopropane-1 99.9 2.8E-23 6.1E-28 212.7 28.4 300 140-460 98-439 (496)
203 KOG1360 5-aminolevulinate synt 99.9 2.4E-23 5.2E-28 194.1 24.3 325 98-460 171-525 (570)
204 cd00613 GDC-P Glycine cleavage 99.9 4E-23 8.7E-28 208.0 28.1 316 106-453 24-398 (398)
205 PRK09257 aromatic amino acid a 99.9 1.4E-23 3.1E-28 210.8 24.7 332 99-457 27-396 (396)
206 PLN02607 1-aminocyclopropane-1 99.9 2.3E-23 5E-28 211.0 26.3 296 141-461 100-439 (447)
207 cd00609 AAT_like Aspartate ami 99.9 3.2E-23 6.9E-28 204.6 26.6 291 141-454 41-349 (350)
208 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 3.4E-23 7.4E-28 206.0 26.9 281 141-460 52-369 (370)
209 PRK13520 L-tyrosine decarboxyl 99.9 9.4E-23 2E-27 203.4 29.9 316 114-458 31-370 (371)
210 PRK04781 histidinol-phosphate 99.9 2.4E-23 5.1E-28 206.6 24.9 295 137-458 56-362 (364)
211 TIGR03801 asp_4_decarbox aspar 99.9 1.7E-23 3.7E-28 212.4 23.7 342 100-462 96-519 (521)
212 PRK04635 histidinol-phosphate 99.9 1.6E-23 3.4E-28 207.3 22.7 315 97-456 30-352 (354)
213 PRK10874 cysteine sulfinate de 99.9 4.6E-22 1E-26 200.4 33.0 332 97-460 19-399 (401)
214 PRK07908 hypothetical protein; 99.9 1.8E-22 4E-27 199.5 29.3 315 97-458 21-346 (349)
215 COG1104 NifS Cysteine sulfinat 99.9 1.4E-22 3E-27 193.9 26.6 334 99-462 3-380 (386)
216 PRK10534 L-threonine aldolase; 99.9 4.7E-23 1E-27 202.4 23.7 317 100-458 1-332 (333)
217 PRK08637 hypothetical protein; 99.9 1E-22 2.2E-27 204.0 26.3 295 141-460 49-387 (388)
218 cd06502 TA_like Low-specificit 99.9 8.7E-23 1.9E-27 201.0 24.9 316 102-455 1-337 (338)
219 TIGR03402 FeS_nifS cysteine de 99.9 7.3E-22 1.6E-26 197.5 31.0 327 100-462 2-375 (379)
220 cd06453 SufS_like Cysteine des 99.9 8.1E-22 1.7E-26 196.8 31.3 313 112-453 8-373 (373)
221 PRK09295 bifunctional cysteine 99.9 2.4E-21 5.1E-26 195.5 33.3 324 97-458 23-403 (406)
222 TIGR01976 am_tr_V_VC1184 cyste 99.9 3.7E-21 8E-26 193.7 31.6 324 98-453 18-397 (397)
223 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 3E-21 6.4E-26 193.2 30.4 326 107-463 24-385 (387)
224 COG0520 csdA Selenocysteine ly 99.9 8E-21 1.7E-25 188.5 32.7 327 98-458 23-404 (405)
225 cd06451 AGAT_like Alanine-glyo 99.9 1.4E-21 3E-26 193.9 26.4 310 115-458 10-356 (356)
226 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 3.2E-21 6.9E-26 191.1 27.4 312 115-457 10-355 (355)
227 TIGR01979 sufS cysteine desulf 99.9 1.8E-20 3.8E-25 189.1 33.0 326 99-460 20-402 (403)
228 PLN02855 Bifunctional selenocy 99.9 2.2E-20 4.7E-25 189.5 32.3 329 97-461 32-420 (424)
229 PRK02948 cysteine desulfurase; 99.9 2E-20 4.3E-25 187.3 30.3 329 99-462 2-377 (381)
230 PLN02368 alanine transaminase 99.9 1E-21 2.2E-26 196.4 20.5 246 140-404 111-392 (407)
231 PLN02397 aspartate transaminas 99.9 8.9E-21 1.9E-25 191.6 26.8 253 189-458 141-420 (423)
232 TIGR03812 tyr_de_CO2_Arch tyro 99.9 4E-20 8.6E-25 184.6 31.0 313 115-455 32-372 (373)
233 TIGR02326 transamin_PhnW 2-ami 99.9 1.5E-20 3.3E-25 186.8 27.6 283 141-457 36-360 (363)
234 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 4.1E-20 8.8E-25 183.6 28.9 316 111-457 9-360 (361)
235 TIGR03403 nifS_epsilon cystein 99.9 7.8E-20 1.7E-24 183.0 30.8 325 100-462 2-378 (382)
236 TIGR01814 kynureninase kynuren 99.9 8.5E-20 1.8E-24 184.1 29.1 327 96-457 26-405 (406)
237 PRK13238 tnaA tryptophanase/L- 99.9 2.1E-19 4.5E-24 182.2 31.7 319 118-459 58-433 (460)
238 TIGR01977 am_tr_V_EF2568 cyste 99.9 1.5E-19 3.1E-24 180.7 29.6 309 115-455 12-375 (376)
239 TIGR02006 IscS cysteine desulf 99.9 4.6E-19 1E-23 178.4 31.8 329 98-461 4-379 (402)
240 PRK13479 2-aminoethylphosphona 99.9 1.8E-19 3.9E-24 179.5 26.5 311 115-460 16-364 (368)
241 PF00266 Aminotran_5: Aminotra 99.9 5.4E-19 1.2E-23 176.2 28.8 315 100-449 2-371 (371)
242 PRK13034 serine hydroxymethylt 99.9 9.2E-19 2E-23 176.2 30.1 318 115-459 40-392 (416)
243 PLN02242 methionine gamma-lyas 99.8 1.2E-19 2.6E-24 182.1 23.2 297 134-461 70-417 (418)
244 PLN02409 serine--glyoxylate am 99.8 2.5E-19 5.3E-24 180.1 24.9 315 115-461 20-374 (401)
245 PLN02651 cysteine desulfurase 99.8 1.3E-19 2.9E-24 180.1 22.2 312 100-447 2-364 (364)
246 KOG0256 1-aminocyclopropane-1- 99.8 1.2E-18 2.7E-23 163.8 25.6 282 155-461 146-463 (471)
247 cd00614 CGS_like CGS_like: Cys 99.8 4.7E-19 1E-23 176.0 22.4 287 134-457 34-368 (369)
248 TIGR01437 selA_rel uncharacter 99.8 9.4E-18 2E-22 166.1 31.3 322 99-456 9-362 (363)
249 COG2008 GLY1 Threonine aldolas 99.8 1.6E-18 3.5E-23 162.6 23.9 324 101-457 2-341 (342)
250 cd00378 SHMT Serine-glycine hy 99.8 2.5E-18 5.5E-23 173.3 27.0 325 98-459 19-385 (402)
251 PRK14012 cysteine desulfurase; 99.8 1.3E-17 2.9E-22 168.0 30.8 326 98-461 4-381 (404)
252 cd00617 Tnase_like Tryptophana 99.8 3.7E-18 8.1E-23 170.7 25.7 335 96-460 18-409 (431)
253 PRK00011 glyA serine hydroxyme 99.8 2.1E-17 4.5E-22 167.4 30.5 329 98-459 25-389 (416)
254 cd06450 DOPA_deC_like DOPA dec 99.8 2.5E-18 5.5E-23 169.7 22.8 281 140-455 38-344 (345)
255 cd00616 AHBA_syn 3-amino-5-hyd 99.8 1.7E-17 3.6E-22 164.3 25.3 297 121-454 3-352 (352)
256 PRK08247 cystathionine gamma-s 99.8 2.2E-17 4.8E-22 163.7 26.1 286 133-459 45-364 (366)
257 KOG0634 Aromatic amino acid am 99.8 4E-17 8.8E-22 154.9 26.1 279 157-462 126-469 (472)
258 KOG1368 Threonine aldolase [Am 99.8 9.6E-18 2.1E-22 151.5 20.2 327 99-457 22-366 (384)
259 PRK08249 cystathionine gamma-s 99.8 3.1E-17 6.8E-22 163.8 25.5 288 133-461 57-395 (398)
260 KOG1357 Serine palmitoyltransf 99.8 5.2E-18 1.1E-22 161.4 18.3 283 137-457 179-500 (519)
261 PRK06767 methionine gamma-lyas 99.8 1E-17 2.2E-22 167.3 21.4 283 133-458 54-384 (386)
262 PRK06234 methionine gamma-lyas 99.8 1.1E-17 2.3E-22 167.7 21.4 248 134-418 58-334 (400)
263 PRK00451 glycine dehydrogenase 99.8 6.9E-17 1.5E-21 165.0 27.5 281 144-457 116-446 (447)
264 PRK08045 cystathionine gamma-s 99.8 8.7E-17 1.9E-21 160.0 26.9 238 133-407 45-305 (386)
265 TIGR01325 O_suc_HS_sulf O-succ 99.8 1.2E-17 2.5E-22 166.5 20.7 241 134-407 48-306 (380)
266 PRK08133 O-succinylhomoserine 99.8 4.5E-17 9.9E-22 162.6 25.0 237 134-407 55-313 (390)
267 PRK07049 methionine gamma-lyas 99.8 6.5E-17 1.4E-21 162.9 25.1 288 134-458 77-425 (427)
268 TIGR02080 O_succ_thio_ly O-suc 99.8 9.4E-17 2E-21 159.7 25.6 237 134-407 45-304 (382)
269 PRK07504 O-succinylhomoserine 99.8 1.1E-16 2.4E-21 160.2 25.2 237 134-407 59-318 (398)
270 TIGR01328 met_gam_lyase methio 99.8 5.8E-17 1.3E-21 161.8 22.2 287 132-459 51-390 (391)
271 KOG1358 Serine palmitoyltransf 99.8 4.8E-17 1E-21 152.2 19.8 338 84-459 81-465 (467)
272 COG3977 Alanine-alpha-ketoisov 99.8 6.2E-16 1.4E-20 140.0 26.0 312 138-464 76-416 (417)
273 KOG0633 Histidinol phosphate a 99.8 3.7E-17 8E-22 145.1 17.8 289 138-456 67-374 (375)
274 PRK07810 O-succinylhomoserine 99.8 1.2E-16 2.7E-21 159.8 23.8 237 134-407 64-323 (403)
275 PRK07503 methionine gamma-lyas 99.8 2.4E-16 5.2E-21 158.0 25.8 218 133-383 58-281 (403)
276 PRK07050 cystathionine beta-ly 99.8 1.4E-16 3.1E-21 159.0 24.0 287 132-459 57-391 (394)
277 PRK06460 hypothetical protein; 99.8 1.6E-16 3.5E-21 157.9 24.2 290 134-460 39-375 (376)
278 PRK08861 cystathionine gamma-s 99.8 4.2E-16 9.2E-21 154.7 27.0 289 132-461 45-385 (388)
279 PRK04366 glycine dehydrogenase 99.8 6.8E-16 1.5E-20 158.2 29.3 325 114-465 81-454 (481)
280 PRK05968 hypothetical protein; 99.8 6.2E-17 1.3E-21 161.6 21.1 285 133-459 56-386 (389)
281 PRK08776 cystathionine gamma-s 99.8 8.1E-16 1.8E-20 153.9 28.7 237 134-407 54-313 (405)
282 PTZ00094 serine hydroxymethylt 99.8 2E-16 4.2E-21 161.3 24.1 317 115-459 46-408 (452)
283 PRK07582 cystathionine gamma-l 99.8 2.2E-16 4.9E-21 156.4 23.9 279 134-454 45-364 (366)
284 TIGR01324 cysta_beta_ly_B cyst 99.8 1.7E-16 3.8E-21 157.2 22.8 284 134-458 44-375 (377)
285 TIGR02379 ECA_wecE TDP-4-keto- 99.8 6.9E-16 1.5E-20 153.2 27.1 306 117-457 11-375 (376)
286 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 3.4E-16 7.4E-21 157.7 23.6 166 134-330 51-219 (418)
287 COG0075 Serine-pyruvate aminot 99.7 2.2E-15 4.8E-20 145.7 27.3 311 115-461 16-365 (383)
288 PRK09028 cystathionine beta-ly 99.7 1.4E-15 3E-20 150.9 26.6 237 134-407 55-313 (394)
289 PRK07811 cystathionine gamma-s 99.7 1.6E-15 3.5E-20 151.3 26.8 237 134-407 55-314 (388)
290 KOG1549 Cysteine desulfurase N 99.7 8.4E-16 1.8E-20 148.0 23.5 328 98-463 44-422 (428)
291 PRK08574 cystathionine gamma-s 99.7 1.4E-15 3E-20 151.4 25.2 236 134-407 47-307 (385)
292 TIGR03235 DNA_S_dndA cysteine 99.7 7.3E-16 1.6E-20 152.6 23.0 289 113-427 8-321 (353)
293 PRK07269 cystathionine gamma-s 99.7 4.7E-16 1E-20 153.5 21.3 235 133-407 47-288 (364)
294 PRK06084 O-acetylhomoserine am 99.7 1.7E-15 3.7E-20 152.4 24.3 166 133-329 51-219 (425)
295 PRK08064 cystathionine beta-ly 99.7 1.4E-15 3E-20 151.9 23.3 287 134-455 48-382 (390)
296 TIGR01329 cysta_beta_ly_E cyst 99.7 1.2E-15 2.5E-20 151.8 22.6 284 134-459 41-375 (378)
297 PRK05967 cystathionine beta-ly 99.7 2.5E-15 5.4E-20 148.8 23.7 238 133-407 57-316 (395)
298 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 1.2E-14 2.5E-19 145.0 28.6 302 117-457 11-374 (375)
299 PLN03226 serine hydroxymethylt 99.7 1.6E-14 3.5E-19 146.9 29.9 313 115-459 46-419 (475)
300 PRK11658 UDP-4-amino-4-deoxy-L 99.7 1.2E-14 2.6E-19 145.0 27.6 301 117-457 14-377 (379)
301 PRK03080 phosphoserine aminotr 99.7 4.8E-15 1E-19 147.8 24.3 305 115-462 23-376 (378)
302 PLN02414 glycine dehydrogenase 99.7 2.6E-14 5.7E-19 154.3 29.4 290 142-462 570-910 (993)
303 PRK05994 O-acetylhomoserine am 99.7 1.1E-14 2.5E-19 146.8 25.0 164 134-328 57-223 (427)
304 PRK13580 serine hydroxymethylt 99.7 2.3E-14 5E-19 143.4 26.7 215 234-460 208-446 (493)
305 TIGR03588 PseC UDP-4-keto-6-de 99.7 1.7E-14 3.7E-19 144.3 26.0 302 117-457 10-380 (380)
306 PRK06702 O-acetylhomoserine am 99.7 1.4E-14 3E-19 145.0 24.6 309 116-462 38-427 (432)
307 PRK05939 hypothetical protein; 99.7 2E-14 4.2E-19 143.6 25.7 166 132-329 39-207 (397)
308 PRK06176 cystathionine gamma-s 99.7 2.7E-15 5.8E-20 149.1 19.3 173 133-337 43-220 (380)
309 PLN02509 cystathionine beta-ly 99.7 3.8E-14 8.3E-19 143.1 27.2 235 134-406 127-384 (464)
310 TIGR01788 Glu-decarb-GAD gluta 99.7 1.2E-13 2.5E-18 138.7 30.4 327 115-460 53-430 (431)
311 PRK08248 O-acetylhomoserine am 99.7 1.8E-14 4E-19 145.1 23.8 164 134-328 58-224 (431)
312 PRK08114 cystathionine beta-ly 99.7 3E-14 6.6E-19 140.9 23.9 239 132-407 54-316 (395)
313 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 3.2E-14 7E-19 140.4 23.9 286 132-458 47-386 (386)
314 PRK07671 cystathionine beta-ly 99.6 3.8E-14 8.3E-19 140.9 24.3 235 134-406 44-301 (377)
315 PRK02769 histidine decarboxyla 99.6 2.6E-13 5.7E-18 134.4 29.7 285 141-461 66-374 (380)
316 PLN03032 serine decarboxylase; 99.6 2E-13 4.3E-18 134.3 27.9 279 142-455 68-372 (374)
317 PRK07812 O-acetylhomoserine am 99.6 5.3E-14 1.1E-18 141.6 24.0 163 135-328 64-230 (436)
318 PRK08134 O-acetylhomoserine am 99.6 1.9E-13 4.1E-18 137.8 25.6 164 134-328 58-224 (433)
319 TIGR01366 serC_3 phosphoserine 99.6 1.1E-13 2.3E-18 137.1 23.2 308 115-460 14-361 (361)
320 PRK04311 selenocysteine syntha 99.6 1.1E-12 2.5E-17 132.4 31.0 310 115-458 98-463 (464)
321 TIGR03531 selenium_SpcS O-phos 99.6 1E-13 2.3E-18 138.5 22.5 296 142-457 107-444 (444)
322 TIGR01364 serC_1 phosphoserine 99.6 6.6E-13 1.4E-17 130.5 26.9 310 115-459 3-348 (349)
323 PLN02724 Molybdenum cofactor s 99.6 8E-13 1.7E-17 143.5 29.5 334 98-458 35-487 (805)
324 TIGR00474 selA seryl-tRNA(sec) 99.6 4.2E-12 9.2E-17 128.0 32.1 303 115-453 93-453 (454)
325 PRK15407 lipopolysaccharide bi 99.6 7.5E-13 1.6E-17 133.9 26.8 293 140-458 63-435 (438)
326 KOG2862 Alanine-glyoxylate ami 99.6 9.4E-13 2E-17 120.2 24.3 278 155-460 68-383 (385)
327 COG2873 MET17 O-acetylhomoseri 99.6 3.1E-13 6.7E-18 126.6 20.9 173 127-330 49-224 (426)
328 PRK05355 3-phosphoserine/phosp 99.6 7.5E-13 1.6E-17 130.8 22.7 308 115-459 14-358 (360)
329 cd01494 AAT_I Aspartate aminot 99.6 9E-14 2E-18 122.1 14.5 165 142-329 2-170 (170)
330 PRK05367 glycine dehydrogenase 99.6 4.6E-12 9.9E-17 137.7 30.2 299 142-462 544-878 (954)
331 PF01041 DegT_DnrJ_EryC1: DegT 99.5 1.4E-12 3.1E-17 129.4 24.1 299 117-454 5-363 (363)
332 PRK12566 glycine dehydrogenase 99.5 4.6E-12 9.9E-17 134.7 28.7 289 142-461 545-878 (954)
333 TIGR00461 gcvP glycine dehydro 99.5 1.3E-11 2.9E-16 132.0 32.0 292 142-462 532-870 (939)
334 COG0399 WecE Predicted pyridox 99.5 3E-12 6.6E-17 124.3 24.8 303 117-459 15-373 (374)
335 COG3844 Kynureninase [Amino ac 99.5 1.4E-11 3E-16 113.5 27.1 334 93-461 27-404 (407)
336 cd00611 PSAT_like Phosphoserin 99.5 2.5E-12 5.4E-17 127.2 24.4 303 115-456 10-353 (355)
337 PLN02880 tyrosine decarboxylas 99.5 2.4E-12 5.2E-17 131.7 23.6 312 139-463 121-488 (490)
338 PRK06434 cystathionine gamma-l 99.5 2.8E-12 6E-17 127.1 22.9 234 134-407 58-308 (384)
339 cd00615 Orn_deC_like Ornithine 99.5 1.1E-13 2.3E-18 133.4 12.4 225 138-383 57-293 (294)
340 COG0626 MetC Cystathionine bet 99.5 3.3E-12 7.2E-17 124.7 22.7 287 134-460 57-395 (396)
341 TIGR02618 tyr_phenol_ly tyrosi 99.5 1.1E-11 2.3E-16 122.6 26.4 331 98-460 38-427 (450)
342 PRK13237 tyrosine phenol-lyase 99.5 1.9E-11 4.1E-16 121.2 27.6 333 98-460 45-434 (460)
343 PRK05613 O-acetylhomoserine am 99.5 7.8E-12 1.7E-16 126.0 24.8 165 134-329 63-232 (437)
344 PLN02590 probable tyrosine dec 99.5 1.3E-10 2.8E-15 119.2 30.8 311 139-464 169-537 (539)
345 KOG0053 Cystathionine beta-lya 99.5 1.2E-11 2.6E-16 119.3 21.1 196 134-360 71-271 (409)
346 PLN02263 serine decarboxylase 99.4 1.3E-10 2.8E-15 116.3 28.2 282 142-459 135-443 (470)
347 COG1103 Archaea-specific pyrid 99.4 1.6E-10 3.5E-15 103.8 22.7 290 139-460 60-381 (382)
348 TIGR03799 NOD_PanD_pyr putativ 99.4 2.8E-10 6.1E-15 116.9 26.6 300 139-452 128-518 (522)
349 PF12897 Aminotran_MocR: Alani 99.4 2.1E-10 4.5E-15 108.9 22.8 304 140-459 69-415 (425)
350 KOG0258 Alanine aminotransfera 99.3 2.1E-10 4.6E-15 108.0 20.5 291 142-460 119-470 (475)
351 COG1448 TyrB Aspartate/tyrosin 99.3 2.7E-10 5.9E-15 107.9 20.1 275 158-456 97-395 (396)
352 PLN02271 serine hydroxymethylt 99.3 1.7E-09 3.6E-14 109.2 25.7 269 158-458 218-539 (586)
353 TIGR02617 tnaA_trp_ase tryptop 99.3 2.3E-09 5.1E-14 105.2 25.8 335 98-460 41-442 (467)
354 PF01212 Beta_elim_lyase: Beta 99.3 1.5E-11 3.3E-16 117.0 9.5 197 115-335 7-214 (290)
355 PLN02414 glycine dehydrogenase 99.2 5.7E-09 1.2E-13 113.4 28.4 305 111-454 112-464 (993)
356 COG1003 GcvP Glycine cleavage 99.2 1.1E-08 2.4E-13 98.2 26.1 291 142-464 111-452 (496)
357 COG0076 GadB Glutamate decarbo 99.2 5.1E-09 1.1E-13 105.7 24.0 295 115-425 74-401 (460)
358 TIGR01365 serC_2 phosphoserine 99.2 5.9E-09 1.3E-13 102.8 23.2 273 142-458 41-372 (374)
359 PLN02452 phosphoserine transam 99.2 1E-08 2.2E-13 101.1 23.2 310 115-459 18-363 (365)
360 PRK05367 glycine dehydrogenase 99.2 2.4E-08 5.1E-13 109.1 28.1 274 143-454 124-437 (954)
361 PRK15029 arginine decarboxylas 99.1 9.5E-09 2E-13 108.8 21.7 294 142-458 207-603 (755)
362 COG0112 GlyA Glycine/serine hy 99.1 1.6E-07 3.4E-12 89.7 26.5 317 115-459 38-390 (413)
363 PF00464 SHMT: Serine hydroxym 99.1 6.8E-09 1.5E-13 102.1 17.4 279 147-452 73-398 (399)
364 KOG3846 L-kynurenine hydrolase 99.1 3.9E-08 8.4E-13 90.2 20.8 338 98-462 66-464 (465)
365 PF01276 OKR_DC_1: Orn/Lys/Arg 99.0 3.1E-09 6.8E-14 104.9 13.9 225 139-384 65-316 (417)
366 PRK12462 phosphoserine aminotr 99.0 2.9E-07 6.2E-12 90.0 25.1 309 115-459 15-362 (364)
367 PRK13578 ornithine decarboxyla 98.9 2.1E-07 4.6E-12 97.7 22.3 297 140-460 174-566 (720)
368 PF00282 Pyridoxal_deC: Pyrido 98.9 2.3E-07 4.9E-12 92.0 20.6 233 142-391 81-356 (373)
369 PRK15399 lysine decarboxylase 98.8 1E-06 2.2E-11 92.6 23.8 293 140-459 195-559 (713)
370 COG0403 GcvP Glycine cleavage 98.8 1E-05 2.2E-10 78.3 26.5 311 111-456 84-447 (450)
371 TIGR00461 gcvP glycine dehydro 98.8 9.5E-06 2.1E-10 87.8 28.7 272 143-454 112-426 (939)
372 PRK15400 lysine decarboxylase 98.7 6.3E-07 1.4E-11 94.2 19.2 293 139-458 194-558 (714)
373 COG1921 SelA Selenocysteine sy 98.7 6.7E-07 1.5E-11 86.5 17.7 224 115-366 39-273 (395)
374 PF03841 SelA: L-seryl-tRNA se 98.7 1.5E-08 3.3E-13 96.9 6.3 222 117-363 20-260 (367)
375 PF04864 Alliinase_C: Allinase 98.7 3E-07 6.5E-12 86.6 14.3 278 142-455 45-361 (363)
376 COG3033 TnaA Tryptophanase [Am 98.6 2.8E-05 6E-10 73.4 23.6 341 97-459 45-444 (471)
377 PF02347 GDC-P: Glycine cleava 98.5 2.7E-05 5.9E-10 77.3 22.0 275 142-453 112-429 (429)
378 COG1982 LdcC Arginine/lysine/o 98.5 4.2E-05 9.1E-10 77.6 22.0 158 141-319 71-236 (557)
379 TIGR03811 tyr_de_CO2_Ent tyros 98.4 2E-05 4.3E-10 82.3 19.1 40 139-178 122-163 (608)
380 PF06838 Met_gamma_lyase: Meth 98.4 2.3E-05 4.9E-10 74.7 17.4 204 115-337 25-246 (403)
381 COG1932 SerC Phosphoserine ami 98.4 8.8E-05 1.9E-09 70.7 21.0 195 247-459 145-363 (365)
382 KOG2040 Glycine dehydrogenase 98.4 8.3E-05 1.8E-09 75.1 21.2 296 142-460 584-919 (1001)
383 PF05889 SLA_LP_auto_ag: Solub 98.3 4.3E-05 9.2E-10 74.2 18.4 216 234-458 140-389 (389)
384 KOG1412 Aspartate aminotransfe 98.3 3.5E-05 7.6E-10 71.3 16.6 276 160-463 104-409 (410)
385 KOG1383 Glutamate decarboxylas 98.2 0.0012 2.6E-08 64.8 23.6 328 116-464 93-451 (491)
386 PRK12566 glycine dehydrogenase 98.0 0.0056 1.2E-07 66.5 28.0 302 111-454 88-439 (954)
387 KOG0629 Glutamate decarboxylas 97.9 0.0004 8.6E-09 67.2 15.4 298 142-456 143-506 (510)
388 KOG1411 Aspartate aminotransfe 97.8 0.00044 9.6E-09 65.1 12.3 213 80-326 51-285 (427)
389 KOG0628 Aromatic-L-amino-acid/ 97.5 0.011 2.3E-07 58.2 17.8 222 234-460 218-472 (511)
390 KOG2467 Glycine/serine hydroxy 97.4 0.011 2.4E-07 56.4 16.7 262 161-458 112-425 (477)
391 PLN02994 1-aminocyclopropane-1 97.1 0.0021 4.5E-08 55.1 8.0 55 137-202 93-153 (153)
392 COG4100 Cystathionine beta-lya 97.1 0.014 3.1E-07 54.2 12.9 201 115-337 36-257 (416)
393 KOG3843 Predicted serine hydro 95.0 0.065 1.4E-06 49.0 6.4 54 234-289 142-196 (432)
394 KOG2040 Glycine dehydrogenase 93.4 12 0.00025 39.3 20.6 49 405-454 430-478 (1001)
395 smart00642 Aamy Alpha-amylase 68.6 15 0.00034 31.8 6.2 59 234-292 17-95 (166)
396 PRK05782 bifunctional sirohydr 67.8 82 0.0018 30.8 11.4 50 305-361 279-332 (335)
397 KOG2433 Uncharacterized conser 67.6 19 0.00041 35.3 6.9 89 115-205 434-542 (577)
398 COG2515 Acd 1-aminocyclopropan 61.1 1.6E+02 0.0034 28.3 12.7 42 249-292 244-285 (323)
399 COG0041 PurE Phosphoribosylcar 56.5 1.3E+02 0.0027 25.7 9.8 21 265-285 42-62 (162)
400 COG1105 FruK Fructose-1-phosph 54.7 37 0.00079 32.7 6.4 36 249-288 132-167 (310)
401 PF13481 AAA_25: AAA domain; P 53.7 23 0.00049 31.2 4.7 52 234-285 128-184 (193)
402 COG0352 ThiE Thiamine monophos 48.7 31 0.00068 31.2 4.7 90 235-333 24-117 (211)
403 KOG2790 Phosphoserine aminotra 48.1 2.5E+02 0.0055 26.7 10.6 144 315-459 205-368 (370)
404 COG0296 GlgB 1,4-alpha-glucan 45.9 25 0.00055 37.2 4.1 33 265-297 212-244 (628)
405 COG0108 RibB 3,4-dihydroxy-2-b 45.7 30 0.00065 30.8 3.9 37 244-285 154-190 (203)
406 PLN02672 methionine S-methyltr 41.5 89 0.0019 35.7 7.7 49 236-288 517-565 (1082)
407 cd01393 recA_like RecA is a b 39.9 1.3E+02 0.0029 27.0 7.7 42 244-285 112-164 (226)
408 cd01121 Sms Sms (bacterial rad 39.3 43 0.00093 33.3 4.5 58 228-285 140-205 (372)
409 TIGR02402 trehalose_TreZ malto 39.1 83 0.0018 33.1 6.8 51 246-296 124-189 (542)
410 COG3870 Uncharacterized protei 38.8 1.5E+02 0.0032 23.2 6.2 60 402-461 5-68 (109)
411 PF06153 DUF970: Protein of un 38.1 48 0.001 26.5 3.7 55 402-459 5-66 (109)
412 KOG1465 Translation initiation 37.2 3.8E+02 0.0083 25.7 11.8 116 145-285 152-269 (353)
413 PF02677 DUF208: Uncharacteriz 36.7 68 0.0015 28.1 4.7 37 245-287 23-62 (176)
414 PRK10785 maltodextrin glucosid 36.4 71 0.0015 34.1 5.9 58 234-291 177-250 (598)
415 PRK13602 putative ribosomal pr 35.4 1.2E+02 0.0026 22.8 5.4 44 236-287 17-60 (82)
416 PF12138 Spherulin4: Spherulat 35.1 86 0.0019 29.3 5.5 50 235-284 18-71 (253)
417 COG1066 Sms Predicted ATP-depe 34.5 73 0.0016 31.9 5.0 56 229-284 151-214 (456)
418 PRK08025 lipid A biosynthesis 34.0 1.5E+02 0.0032 28.5 7.2 19 190-208 123-141 (305)
419 TIGR03853 matur_matur probable 33.4 68 0.0015 23.8 3.5 48 142-200 20-67 (77)
420 PRK13601 putative L7Ae-like ri 32.8 67 0.0015 24.2 3.6 46 236-289 14-59 (82)
421 PF00408 PGM_PMM_IV: Phosphogl 32.1 1E+02 0.0023 22.3 4.5 34 424-458 40-73 (73)
422 PF13167 GTP-bdg_N: GTP-bindin 32.1 1.6E+02 0.0035 22.9 5.7 54 234-288 9-66 (95)
423 cd01422 MGS Methylglyoxal synt 31.8 1.1E+02 0.0025 24.5 5.1 46 236-285 60-106 (115)
424 PF10678 DUF2492: Protein of u 30.7 71 0.0015 23.8 3.3 48 142-200 22-69 (78)
425 TIGR02237 recomb_radB DNA repa 30.6 2E+02 0.0043 25.5 7.1 54 237-290 88-151 (209)
426 PF10087 DUF2325: Uncharacteri 30.1 96 0.0021 23.9 4.3 41 236-285 40-80 (97)
427 TIGR03573 WbuX N-acetyl sugar 30.1 5.3E+02 0.011 25.3 10.4 21 266-286 146-166 (343)
428 cd00984 DnaB_C DnaB helicase C 29.3 1.1E+02 0.0023 28.0 5.2 52 234-285 107-168 (242)
429 TIGR02403 trehalose_treC alpha 29.2 1.1E+02 0.0025 32.1 5.9 59 234-292 25-100 (543)
430 PRK08335 translation initiatio 29.1 5E+02 0.011 24.6 9.6 117 144-285 98-216 (275)
431 COG3964 Predicted amidohydrola 28.5 93 0.002 29.8 4.4 68 235-312 199-272 (386)
432 cd01821 Rhamnogalacturan_acety 27.8 1E+02 0.0022 27.2 4.6 50 235-284 96-150 (198)
433 PRK09505 malS alpha-amylase; R 27.7 1.4E+02 0.003 32.5 6.2 61 233-293 227-318 (683)
434 PRK10933 trehalose-6-phosphate 27.2 1.5E+02 0.0033 31.3 6.4 59 234-292 31-106 (551)
435 cd01123 Rad51_DMC1_radA Rad51_ 26.9 77 0.0017 28.8 3.8 53 238-290 106-171 (235)
436 COG1435 Tdk Thymidine kinase [ 26.8 4.7E+02 0.01 23.5 8.9 34 247-286 83-116 (201)
437 PRK11823 DNA repair protein Ra 26.3 1.1E+02 0.0024 31.3 5.1 56 230-285 140-203 (446)
438 PF00455 DeoRC: DeoR C termina 25.7 4.2E+02 0.0091 22.6 8.9 49 246-296 94-143 (161)
439 TIGR00416 sms DNA repair prote 25.6 1E+02 0.0022 31.6 4.7 56 229-284 153-216 (454)
440 PRK06683 hypothetical protein; 25.4 1.1E+02 0.0024 23.0 3.7 47 236-290 17-63 (82)
441 COG0514 RecQ Superfamily II DN 25.3 95 0.0021 32.8 4.3 46 236-290 97-142 (590)
442 PRK01018 50S ribosomal protein 25.1 2E+02 0.0043 22.5 5.2 42 236-285 22-63 (99)
443 PF03652 UPF0081: Uncharacteri 24.8 2.1E+02 0.0046 23.7 5.7 57 234-290 39-98 (135)
444 cd04915 ACT_AK-Ectoine_2 ACT d 24.5 2E+02 0.0044 20.3 4.8 45 410-457 18-64 (66)
445 PRK10886 DnaA initiator-associ 24.4 5.1E+02 0.011 23.1 8.5 41 236-285 101-141 (196)
446 PF04476 DUF556: Protein of un 24.2 5.7E+02 0.012 23.6 10.4 64 246-318 144-212 (235)
447 smart00839 ELFV_dehydrog Gluta 24.2 2.4E+02 0.0053 22.1 5.6 50 412-461 39-96 (102)
448 PLN03244 alpha-amylase; Provis 24.1 97 0.0021 33.9 4.2 32 265-296 439-470 (872)
449 PF00128 Alpha-amylase: Alpha 24.1 68 0.0015 30.3 3.0 28 265-292 50-77 (316)
450 PF00926 DHBP_synthase: 3,4-di 24.0 1.1E+02 0.0025 27.2 4.1 37 244-285 150-186 (194)
451 TIGR02012 tigrfam_recA protein 23.9 3.3E+02 0.0073 26.4 7.6 55 236-290 123-193 (321)
452 TIGR00506 ribB 3,4-dihydroxy-2 23.9 1.3E+02 0.0027 27.0 4.3 35 246-285 157-191 (199)
453 PF13872 AAA_34: P-loop contai 23.8 52 0.0011 31.5 2.0 24 267-290 159-183 (303)
454 TIGR02456 treS_nterm trehalose 23.7 1.6E+02 0.0035 30.9 5.9 59 234-292 26-101 (539)
455 cd01822 Lysophospholipase_L1_l 23.4 1E+02 0.0022 26.3 3.8 48 236-284 91-139 (177)
456 cd04920 ACT_AKiii-DAPDC_2 ACT 23.2 1.6E+02 0.0035 20.5 4.0 45 410-457 17-61 (63)
457 PRK08091 ribulose-phosphate 3- 23.1 2.1E+02 0.0045 26.3 5.7 54 233-286 129-185 (228)
458 PRK05234 mgsA methylglyoxal sy 22.9 1.6E+02 0.0035 24.7 4.6 48 236-287 65-113 (142)
459 TIGR00789 flhB_rel flhB C-term 22.4 71 0.0015 24.1 2.1 22 268-289 28-49 (82)
460 KOG3974 Predicted sugar kinase 22.3 2E+02 0.0044 26.9 5.3 49 234-287 91-139 (306)
461 PRK11633 cell division protein 22.1 3.3E+02 0.0072 24.9 6.8 49 408-456 161-213 (226)
462 cd01840 SGNH_hydrolase_yrhL_li 21.6 1.7E+02 0.0037 24.4 4.7 48 234-286 68-115 (150)
463 COG1349 GlpR Transcriptional r 21.5 6.6E+02 0.014 23.3 11.4 50 246-297 166-216 (253)
464 PF14871 GHL6: Hypothetical gl 21.5 1.1E+02 0.0024 25.3 3.3 20 266-285 43-62 (132)
465 COG4799 Acetyl-CoA carboxylase 21.1 5.2E+02 0.011 27.0 8.5 44 249-292 327-371 (526)
466 cd01394 radB RadB. The archaea 20.7 4.4E+02 0.0094 23.5 7.5 45 246-290 103-159 (218)
467 PRK08883 ribulose-phosphate 3- 20.6 2.3E+02 0.0051 25.8 5.5 51 234-286 118-173 (220)
468 COG2159 Predicted metal-depend 20.5 2.2E+02 0.0048 27.2 5.6 52 235-292 115-166 (293)
469 COG1088 RfbB dTDP-D-glucose 4, 20.3 7.9E+02 0.017 23.8 9.3 96 189-295 25-136 (340)
470 PF00549 Ligase_CoA: CoA-ligas 20.3 1.1E+02 0.0025 26.0 3.2 40 235-278 62-101 (153)
471 PRK00910 ribB 3,4-dihydroxy-2- 20.2 1.7E+02 0.0036 26.7 4.3 35 246-285 168-202 (218)
No 1
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-86 Score=625.98 Aligned_cols=394 Identities=51% Similarity=0.858 Sum_probs=375.4
Q ss_pred chHHHHHHHHhccccccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCH
Q 012368 61 NNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSI 140 (465)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~ 140 (465)
.+...++...++..+.|.+.|+++++|+|+|+||.+|++||||.+++++++|||+||.+++|+.+|++++.+.++.+.++
T Consensus 5 ~~~~~~~~~~~~~~~~Y~~~~~~~~~G~G~~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~~ 84 (404)
T COG4992 5 LTAATIELFMKYLMPTYGRLPVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFYNE 84 (404)
T ss_pred cHHHHHHHHHHhhhcccCcCceeEEeccccEEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccccCCh
Confidence 45566777788899999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred HHHHHHHHHHhhcC-CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCC
Q 012368 141 PQIELAKRLVACSF-ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSP 219 (465)
Q Consensus 141 ~~~~la~~l~~~~~-~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 219 (465)
+..+|+++|++..+ .++|+|+|||+|||+.|+|+||.|++ + +.+.+||.|.++|||.|.+++++++.+.|+.+
T Consensus 85 ~~~~la~~L~~~s~~~d~vff~NSGaEA~EaAiKlARk~~~--~----~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~ 158 (404)
T COG4992 85 PQAELAEKLVELSPFADRVFFCNSGAEANEAALKLARKYTG--D----PEKSKIIAFENSFHGRTLGALSATGQPKYRKG 158 (404)
T ss_pred HHHHHHHHHHhhCccccEEEEcCCcHHHHHHHHHHHHHHcC--C----CCCcEEEEEcCCcCCccceeeeccCChhhccC
Confidence 99999999999997 99999999999999999999999986 1 14779999999999999999999999999999
Q ss_pred CCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccc
Q 012368 220 FEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW 299 (465)
Q Consensus 220 ~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~ 299 (465)
|.|+.+++.++||||++++++++++ ++++||+||+|+++|+++++++||++++++|++||++||+||||||+||+|++|
T Consensus 159 F~Pl~~g~~~vpfnDi~al~~ai~~-~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~f 237 (404)
T COG4992 159 FGPLLPGFRHVPFNDIEALEAAIDE-DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLF 237 (404)
T ss_pred CCCCCCCceecCCCCHHHHHHHhcc-CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHH
Confidence 9999999999999999999999987 899999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 012368 300 AHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFK 379 (465)
Q Consensus 300 ~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~ 379 (465)
+++++++.|||+|++|++|||+|+|++++++.+.+.+.++.|++||++||++|+++.++|+++.++++.+++++++++|+
T Consensus 238 A~e~~gV~PDI~tlaK~LgGG~PigA~la~~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~ 317 (404)
T COG4992 238 AYEHYGVEPDILTLAKALGGGFPIGAMLATEEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLL 317 (404)
T ss_pred HHHHhCCCCCEEEeeccccCCccceeeEEchhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCceeeeccceEEEEEecCC--hHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 380 ETLKQKLARNPHVKDVRGLGLIIGIEFDVS--ATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 380 ~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~--~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
++|+++..++|.+..+||.|+|+++++..+ +..+.+.|.++||++.+.+. +++||.||+.++++|+++++++|++++
T Consensus 318 ~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~~a~~~~~~~~~~gvL~~~a~~-~ViR~~PpL~i~~eei~~~~~~l~~~l 396 (404)
T COG4992 318 QRLRELKRRYPLVKEVRGRGLMIGIELKEPYRARDIVRALREEGVLVLPAGP-NVIRFLPPLVITEEEIDEALDALERAL 396 (404)
T ss_pred HHHHHHhhcCCceeeeecceeEEEEEecCcccHHHHHHHHHHCCeEEecCCC-CeEEecCCccCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999544 78999999999999999887 899999999999999999999999999
Q ss_pred HHhhh
Q 012368 458 PVLDS 462 (465)
Q Consensus 458 ~~~~~ 462 (465)
..+..
T Consensus 397 ~~~~~ 401 (404)
T COG4992 397 AAASA 401 (404)
T ss_pred HHhhh
Confidence 87653
No 2
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-76 Score=578.25 Aligned_cols=390 Identities=43% Similarity=0.740 Sum_probs=351.0
Q ss_pred chHHHHHHHHhccccccCC--CceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCC
Q 012368 61 NNKEVMEAEKKLLVGTYNR--APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYY 138 (465)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~--~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~ 138 (465)
...++++++.++..++|.. .|++++|++|+|+||+|||+||||.++.++.++||+||.|++|+.+|++++.+....+.
T Consensus 17 ~~~~~~~r~~~~~~r~~~~~~~p~~~~ra~G~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~ 96 (447)
T COG0160 17 KALELIERREEALARSYGRFRFPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDL 96 (447)
T ss_pred chHHHHHHHHHHhccccccccCcceEEecccCEEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCcc
Confidence 5566777777777777766 79999999999999999999999999999999999999999999999999876655444
Q ss_pred C-HHHHHHHHHHHhhcC---CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCC
Q 012368 139 S-IPQIELAKRLVACSF---ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE 214 (465)
Q Consensus 139 ~-~~~~~la~~l~~~~~---~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~ 214 (465)
. +...+++++|.+..+ .++++|+|||+|||++|+|+|+.+|+ +..||.|..+|||.|.+++++++..
T Consensus 97 ~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tg---------r~~viaf~~afHG~T~galslT~~~ 167 (447)
T COG0160 97 YYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTG---------RPGVIAFDGAFHGRTLGALSLTGSK 167 (447)
T ss_pred cchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhC---------CCcEEEECCcccccchhhHHhccCc
Confidence 4 889999999999886 57899999999999999999999996 8899999999999999999998765
Q ss_pred CcC-CCCCCCCCCceEeeCCC-----------------HHHHHhhcC-----CCCeEEEEEcccCCCCCcccCCHHHHHH
Q 012368 215 HYR-SPFEPVMPGVNFVEYGN-----------------IEATRKLIQ-----PGKTAAVFVEPIQGEGGIYSATKEFLQF 271 (465)
Q Consensus 215 ~~~-~~~~~~~~~~~~~~~~d-----------------~~~le~~l~-----~~~~a~vi~ep~~~~~G~~~~~~~~l~~ 271 (465)
... ..+.+..+++..+|+++ .+.+++.+. ..++|++|+||+|++||.+++|++|+++
T Consensus 168 ~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~ 247 (447)
T COG0160 168 PPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKA 247 (447)
T ss_pred cccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHH
Confidence 433 44667777787777653 244666443 4579999999999999999999999999
Q ss_pred HHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHH
Q 012368 272 LRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLV 351 (465)
Q Consensus 272 l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~ 351 (465)
|+++|++||+++|+||||+||||||++|+++++++.|||+|+||++++|+|+|++++++++++ ..++.+.+||.+||++
T Consensus 248 l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~aK~ig~G~Pl~avv~r~ei~~-~~~g~~~~Tf~GNpva 326 (447)
T COG0160 248 LRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLAKSLGGGLPLSAVVGRAEIMD-WPPGGHGGTFGGNPVA 326 (447)
T ss_pred HHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEecccccCCCceeEEeccHHhcc-cCCcccCCCCCcCHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999 7778899999999999
Q ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC------C----hHHHHHHHHHCC
Q 012368 352 CNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV------S----ATPVVDACRDSG 421 (465)
Q Consensus 352 ~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~------~----~~~~~~~l~~~G 421 (465)
|+|+.++|+.++++++.++..+.+++++++|.++.+++|.+.++||.|+|+++++.. + ..+++..|+++|
T Consensus 327 ~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~G 406 (447)
T COG0160 327 CAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERG 406 (447)
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcC
Confidence 999999999999899999999999999999999999999999999999999999921 2 356888999999
Q ss_pred ceEeecCC-CCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 422 LLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 422 v~v~~~~~-~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
+++..+|. ++++||.||++++++++|+++++|+++++++
T Consensus 407 lil~~~G~~~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 407 LLLLTCGPHGNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred CEEeccCCCCcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 99988874 6999999999999999999999999999764
No 3
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=3e-74 Score=551.17 Aligned_cols=399 Identities=26% Similarity=0.382 Sum_probs=350.8
Q ss_pred hhccccccchhhhccCCCCCCcchHHHHHHHHhccccccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHH
Q 012368 39 AAASVNVEVNDAARGSAGGLGRNNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDAD 118 (465)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~ 118 (465)
...|.++ |++|++++|||+++++|.+. +....|+++++++|+++||+|||+||||+++|+++.|||+||.
T Consensus 4 ~~~S~~l-~~~A~~~~pGGvnspvra~~---------~v~~~P~fi~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~ 73 (432)
T COG0001 4 FPKSEAL-FERAKKVIPGGVNSPVRAFK---------SVGGYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPA 73 (432)
T ss_pred ccchHHH-HHHHhhhCCCCCCccccccC---------CCCCCCeeEEeccCCeEEeCCCCEeeehhccCcccccCCCCHH
Confidence 3577788 99999999999999999765 2234899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC-CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEc
Q 012368 119 WIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFT 197 (465)
Q Consensus 119 v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~ 197 (465)
|++|+.++++++.. .+.+++.+.++++.|.++++ .|+|.|+||||||++.|+|+||.||+ |++||.|+
T Consensus 74 V~~Av~~~l~~G~~--fg~Pte~Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~Tg---------R~kIikF~ 142 (432)
T COG0001 74 VVEAVQEQLERGLS--FGAPTELEVELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYTG---------RDKIIKFE 142 (432)
T ss_pred HHHHHHHHHHhcCC--CCCCCHHHHHHHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhhC---------CCeEEEEc
Confidence 99999999998644 45678889999999999998 69999999999999999999999996 99999999
Q ss_pred CCcccCccccccccC--CCCcCCCCC-----CCCCCceEeeCCCHHHHHhhcC--CCCeEEEEEcccCCCCCcccCCHHH
Q 012368 198 NSFHGRTMGALALTS--KEHYRSPFE-----PVMPGVNFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEF 268 (465)
Q Consensus 198 ~~yhg~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~d~~~le~~l~--~~~~a~vi~ep~~~~~G~~~~~~~~ 268 (465)
++|||+.+..+.-.+ ...+..+-. .....+..+||||+++++++++ ++++|+||+||+.+|.|+++|.++|
T Consensus 143 G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~F 222 (432)
T COG0001 143 GCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGF 222 (432)
T ss_pred CCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHH
Confidence 999999998876322 221111111 1122346889999999999998 4689999999999999999999999
Q ss_pred HHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCC---CCcCCC
Q 012368 269 LQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYG---DHGSTF 345 (465)
Q Consensus 269 l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~---~~~~t~ 345 (465)
|++|+++|++||++||+|||+||| |.+..+++.++++.||+.||||.+|||+|+|++.+++++|+.+.+. .+.+|+
T Consensus 223 l~~Lr~lt~e~G~lLI~DEViTGF-R~~~gGaq~~~gi~PDlttlGKiIGGGlP~ga~gGr~eiM~~~~p~g~vyqaGT~ 301 (432)
T COG0001 223 LEGLRELTEEHGALLIFDEVITGF-RVALGGAQGYYGVEPDLTTLGKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQAGTL 301 (432)
T ss_pred HHHHHHHHHHcCcEEEEecchhhc-ccCCcccccccCcCcchhhhhhhhcCCcceeeeccHHHHHhhhCCCCCccccCCC
Confidence 999999999999999999999999 8777889999999999999999999999999999999999988763 688999
Q ss_pred CChHHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC---------------C
Q 012368 346 AGSPLVCNAAIAVLDKISN-PAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV---------------S 409 (465)
Q Consensus 346 ~~~~~~~~aa~a~L~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~---------------~ 409 (465)
++||++++|+.++|+.+.+ +..++++.+.+++|++.|++.+.+++....+...|.++.+.|.. .
T Consensus 302 sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~ 381 (432)
T COG0001 302 SGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVER 381 (432)
T ss_pred CCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHH
Confidence 9999999999999999876 46899999999999999999999998888899999999998831 1
Q ss_pred hHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 410 ATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 410 ~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
..++.+.|+++||++.|+.. -.+.++..||+++|++.+++++++++++..
T Consensus 382 ~~~~~~~~l~~GV~l~ps~~---ea~flS~ahte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 382 FAKFFHHLLNRGVYLAPSQF---EAGFLSTAHTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred HHHHHHHHHhCCcccCCccc---cceeeecccCHHHHHHHHHHHHHHHHHhhc
Confidence 34567789999999999864 234568899999999999999999988764
No 4
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.1e-74 Score=517.26 Aligned_cols=394 Identities=37% Similarity=0.602 Sum_probs=363.4
Q ss_pred chHHHHHHHHhccccccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCH
Q 012368 61 NNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSI 140 (465)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~ 140 (465)
.++..++++.++..++|+|.|+++.+++|+++||.+|++|+||.+++++++.|||||.|.+|+.+|.++++..+..+.+.
T Consensus 22 aS~~~~~~E~k~~ahnyhpLpvvf~ka~g~~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlssrafYnd 101 (427)
T KOG1402|consen 22 ASQQIMERENKYGAHNYHPLPVVFSKAKGSRVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSSRAFYND 101 (427)
T ss_pred chhhhhchhhhcccccCCcCceEEEecCCcEEECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhhHHHhhh
Confidence 45557788889999999999999999999999999999999999999999999999999999999999877666667777
Q ss_pred HHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcC--CCCCCCCceEEEEcCCcccCccccccccCCCCcCC
Q 012368 141 PQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSN--PDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRS 218 (465)
Q Consensus 141 ~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~--~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~ 218 (465)
...++++.+.+.++.++|+-+|+|.||++.|++++|.+.-... |+ .+.+|+...++|||.+.+++++++++....
T Consensus 102 ~~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~---nka~il~~~~nFhGrT~~ais~s~d~ds~~ 178 (427)
T KOG1402|consen 102 VLGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIPK---NKAKILSAENNFHGRTLGAISLSTDPDSWD 178 (427)
T ss_pred hHHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHHHHHhhccCCc---cceeEEEecccccCceeeeEEecCCcchhh
Confidence 8899999999999999999999999999999999997653221 22 356789999999999999999998886666
Q ss_pred CCCCCCCC-ceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc
Q 012368 219 PFEPVMPG-VNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY 297 (465)
Q Consensus 219 ~~~~~~~~-~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~ 297 (465)
.|.|..|+ +..+||+|.++|+.+++...++++++||+|+++|+++|+++||+++++||++|++++|.||||||+||+|+
T Consensus 179 ~fgp~~P~~~~~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk 258 (427)
T KOG1402|consen 179 GFGPFLPGVVDKVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGK 258 (427)
T ss_pred ccCCCCCCcceeeccCCHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCc
Confidence 78888888 78999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 012368 298 LWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGH 376 (465)
Q Consensus 298 ~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~ 376 (465)
++++++.++.||++.|+|+++|| +|++++++++++|..+.++.|++||++||++++++.|+|+++.++.+.++.+.++.
T Consensus 259 ~la~d~env~PDivilgKalSGG~~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~eekL~era~~lG~ 338 (427)
T KOG1402|consen 259 LLACDYENVRPDIVILGKALSGGVYPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVEEKLVERAAKLGE 338 (427)
T ss_pred EEEeehhhcCCCeEEEeccccCCeeeeEEEEecHHHHhccCCCccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 89999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCC-CceeeeccceEEEEEec------CChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHH
Q 012368 377 YFKETLKQKLARNP-HVKDVRGLGLIIGIEFD------VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQA 449 (465)
Q Consensus 377 ~l~~~l~~~~~~~~-~~~~~~~~g~~~~i~~~------~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~ 449 (465)
.++.+|.++..++| .+..++|+|++..+.+. .++..++-.|.++|++..|.+. +.+||.||+.++++|+++.
T Consensus 339 ~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkptH~-~IiRfaPPL~I~e~dl~eg 417 (427)
T KOG1402|consen 339 ILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTSGQDAWDVCLALKENGLLAKPTHG-NIIRFAPPLVISEEDLREG 417 (427)
T ss_pred HHHHHHHhccccccchhheeeccceEEEEEeccccccchhHHHHHHcccccccccCCCCC-CeEEecCCcccCHHHHHHH
Confidence 99999999988887 57889999999999983 3466788888899999998875 8999999999999999999
Q ss_pred HHHHHHHHH
Q 012368 450 VEILCKTLP 458 (465)
Q Consensus 450 l~~l~~~l~ 458 (465)
+++|.+++.
T Consensus 418 ~e~i~k~i~ 426 (427)
T KOG1402|consen 418 IEAIEKTIA 426 (427)
T ss_pred HHHHHHHhc
Confidence 999998764
No 5
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=2.8e-70 Score=530.62 Aligned_cols=390 Identities=38% Similarity=0.637 Sum_probs=343.1
Q ss_pred HHhccccccCC------CceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccc-cCCCCCHH
Q 012368 69 EKKLLVGTYNR------APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHV-SNMYYSIP 141 (465)
Q Consensus 69 ~~~~~~~~~~~------~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~-~~~~~~~~ 141 (465)
+.++.|++|.. .|.++++++|.|+||.|||+|||..|++|++++||++|+|.+|+.+|++++.+. ...+.+.+
T Consensus 9 d~~~~whP~t~~~~~~~~~~~i~~aeG~yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P 88 (449)
T COG0161 9 DLSHLWHPFTQMRDPLAEPRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEP 88 (449)
T ss_pred hhhheeccccccccccccceeeeecceeEEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCCch
Confidence 45566765542 278999999999999999999999999999999999999999999999998776 33455666
Q ss_pred HHHHHHHHHhhcC---CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcC-
Q 012368 142 QIELAKRLVACSF---ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYR- 217 (465)
Q Consensus 142 ~~~la~~l~~~~~---~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~- 217 (465)
..+|+++|++..+ .++|+|++|||||++.|+|++++|...++++ .|.++|....+|||.+.+++++++.....
T Consensus 89 a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p---~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~ 165 (449)
T COG0161 89 AIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQP---QRKKFISRRNGYHGDTLGAMSVGGPVALRH 165 (449)
T ss_pred HHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCC---cceEEEEeccCcCcccchheeccCchhhhh
Confidence 9999999999987 7899999999999999999999999877765 47889999999999999999999843333
Q ss_pred CCCCCCCCCceEeeCC-----------------CHHHHHhhcC---CCCeEEEEEcccCCC-CCcccCCHHHHHHHHHHH
Q 012368 218 SPFEPVMPGVNFVEYG-----------------NIEATRKLIQ---PGKTAAVFVEPIQGE-GGIYSATKEFLQFLRDAC 276 (465)
Q Consensus 218 ~~~~~~~~~~~~~~~~-----------------d~~~le~~l~---~~~~a~vi~ep~~~~-~G~~~~~~~~l~~l~~l~ 276 (465)
..+.++.+++.++|.+ ..++||++|. ++++++||+||+.+. ||+++|++.||++++++|
T Consensus 166 ~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC 245 (449)
T COG0161 166 AFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREIC 245 (449)
T ss_pred hhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHH
Confidence 3344444544433322 1566788776 378999999998777 999999999999999999
Q ss_pred HHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccCC-----CCcCCCCChHH
Q 012368 277 DDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYG-----DHGSTFAGSPL 350 (465)
Q Consensus 277 ~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~-----~~~~t~~~~~~ 350 (465)
++||++||+|||.|||||+|++|++++++++|||+|++|++++| +|+|++++++++.+.+... .|+.||++||+
T Consensus 246 ~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPl 325 (449)
T COG0161 246 DKYGILLIADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPL 325 (449)
T ss_pred HHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeeeecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHH
Confidence 99999999999999999999999999999999999999999999 8999999999999888653 58999999999
Q ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEe--cCC---------hHHHHHHHHH
Q 012368 351 VCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEF--DVS---------ATPVVDACRD 419 (465)
Q Consensus 351 ~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~--~~~---------~~~~~~~l~~ 419 (465)
+|+||++.|++++++++.+++++.+.++.+.|++++.++|.+.++|+.|++..+++ +.. ...+.+.+++
T Consensus 326 acAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e 405 (449)
T COG0161 326 ACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALE 405 (449)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999997778899999999999999999 222 4467888899
Q ss_pred CCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhhc
Q 012368 420 SGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDSN 463 (465)
Q Consensus 420 ~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 463 (465)
+|++++|.+ +.+-++||+++|++||+++++++.+++++..++
T Consensus 406 ~Gl~iRp~g--~~i~~~PPliit~~eid~l~~~l~~al~~~~~~ 447 (449)
T COG0161 406 RGLLIRPLG--DVIYLMPPLIITREEIDELVDALREALDETLAD 447 (449)
T ss_pred CCeEEeecC--CEEEEcCCccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 999999985 789999999999999999999999999877654
No 6
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=2.7e-69 Score=546.83 Aligned_cols=380 Identities=27% Similarity=0.482 Sum_probs=332.5
Q ss_pred CceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhccccc--CCCCCHHHHHHHHHHHhhcC--C
Q 012368 80 APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS--NMYYSIPQIELAKRLVACSF--A 155 (465)
Q Consensus 80 ~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~la~~l~~~~~--~ 155 (465)
.|+++++++|+++||.|||+||||.++++++++||+||+|.+|+.+|++++.+.. ..+.++...+|+++|++..+ .
T Consensus 32 ~p~~i~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~ 111 (461)
T PRK07482 32 PGRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGM 111 (461)
T ss_pred CCeeEEeeeeeEEEECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCCc
Confidence 4799999999999999999999999999999999999999999999999875432 24667889999999999885 6
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCC--
Q 012368 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG-- 233 (465)
Q Consensus 156 ~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 233 (465)
++|+|++||+||++.|+|+|+.|+..++.. +|.+||.++++|||++.+++++++.+.++..+.+..+++.+++++
T Consensus 112 ~~v~f~~sGSEAve~AlKlAr~~~~~~g~~---~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~ 188 (461)
T PRK07482 112 SKVYYGLSGSDANETQIKLVWYYNNVLGRP---EKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHY 188 (461)
T ss_pred CEEEEeCchHHHHHHHHHHHHHHHHhcCCC---CCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCcc
Confidence 899999999999999999999887433221 478999999999999999998887666555555555555444322
Q ss_pred ----------------CHHHHHhhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCC
Q 012368 234 ----------------NIEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGR 294 (465)
Q Consensus 234 ----------------d~~~le~~l~---~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr 294 (465)
+++++++++. ++++++||+||+++++|+++++++|+++|+++|++||++||+|||+|||||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGR 268 (461)
T PRK07482 189 YRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGR 268 (461)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCc
Confidence 3577888884 357999999999999999999999999999999999999999999999999
Q ss_pred CCccccccccCCcccEEEecccCCCcc-ceeeEEeCHHHHhhccC-------CCCcCCCCChHHHHHHHHHHHHHhcCch
Q 012368 295 TGYLWAHEHYGIFPDIMTLAKPLAGGL-PIGAALVTEKVASAINY-------GDHGSTFAGSPLVCNAAIAVLDKISNPA 366 (465)
Q Consensus 295 ~g~~~~~~~~~~~pdi~t~sK~lg~G~-~iG~v~~~~~i~~~~~~-------~~~~~t~~~~~~~~~aa~a~L~~~~~~~ 366 (465)
+|.+|+++++++.||++|+||+++||+ |+|++++++++++.+.. ..|++||++||++|+|++++|+.+++++
T Consensus 269 tG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~ 348 (461)
T PRK07482 269 LGSMFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILEREN 348 (461)
T ss_pred CcchhhHHhcCCCCCEEEEccccccCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999995 99999999999887752 2478999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC--C-----------hHHHHHHHHHCCceEeecCCCCEE
Q 012368 367 FLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV--S-----------ATPVVDACRDSGLLVLTAGKGNVV 433 (465)
Q Consensus 367 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~--~-----------~~~~~~~l~~~Gv~v~~~~~~~~l 433 (465)
++++++++++++++.|+++..++|.+..++|.|+|+++++.. . ...+...|+++||++.+...++++
T Consensus 349 l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~~~~~i 428 (461)
T PRK07482 349 LVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAMPHGDIL 428 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCCCCCEE
Confidence 999999999999999999999999999999999999999931 0 246788899999998654224789
Q ss_pred EEecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 434 RLVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 434 Ri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
|+.||+++|++||++++++|+++++++.+
T Consensus 429 ~~~Ppl~it~~ei~~~~~~l~~~l~~~~~ 457 (461)
T PRK07482 429 GFAPPLVLTRAEADEIVAIAKDAVDEVLG 457 (461)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987644
No 7
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=3.9e-69 Score=545.43 Aligned_cols=381 Identities=32% Similarity=0.510 Sum_probs=330.9
Q ss_pred CceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC--CCCCHHHHHHHHHHHhhcC--C
Q 012368 80 APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN--MYYSIPQIELAKRLVACSF--A 155 (465)
Q Consensus 80 ~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~la~~l~~~~~--~ 155 (465)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++.+... .+.+++..+|+++|++..+ .
T Consensus 28 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 107 (459)
T PRK05965 28 GVTVLASAKGATLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSL 107 (459)
T ss_pred CCceEEeeeEeEEEECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCc
Confidence 47899999999999999999999999999999999999999999999998655332 3557778999999999885 6
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC---
Q 012368 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY--- 232 (465)
Q Consensus 156 ~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 232 (465)
++|+|++||+||++.|+|+||.|+..++.+ ++.+||.++++|||++.+++++++.+.+...+.+..+++.++|+
T Consensus 108 ~~v~f~~sGSEAve~AlKlAr~~~~~~g~~---~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~ 184 (459)
T PRK05965 108 NHVYFTLGGSDAVDSAVRFIRHYWNATGRP---SKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYP 184 (459)
T ss_pred CEEEEeCChhHHHHHHHHHHHHHHHhcCCC---CccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcc
Confidence 899999999999999999999997533322 47889999999999998888887765555455444444444332
Q ss_pred ------CC--------HHHHHhhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCC
Q 012368 233 ------GN--------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT 295 (465)
Q Consensus 233 ------~d--------~~~le~~l~---~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~ 295 (465)
+| ++++++++. ++++++||+||+++++|+++++++|+++|+++|++||++||+|||+|||||+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRt 264 (459)
T PRK05965 185 YRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRT 264 (459)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccC
Confidence 23 256788775 2579999999999999999999999999999999999999999999999999
Q ss_pred CccccccccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccC-------CCCcCCCCChHHHHHHHHHHHHHhcCchH
Q 012368 296 GYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY-------GDHGSTFAGSPLVCNAAIAVLDKISNPAF 367 (465)
Q Consensus 296 g~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~-------~~~~~t~~~~~~~~~aa~a~L~~~~~~~~ 367 (465)
|.+|+++++++.|||+|+||+++|| +|+|++++++++++.+.. ..|++||++||++|+|++++|++++++++
T Consensus 265 G~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l 344 (459)
T PRK05965 265 GPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGL 344 (459)
T ss_pred chhhhHhhcCCCCCeEEechhhccCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 9999999999999999999999999 599999999999988753 24789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEec--C------C-----hHHHHHHHHHCCceEeecCCCCEEE
Q 012368 368 LASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFD--V------S-----ATPVVDACRDSGLLVLTAGKGNVVR 434 (465)
Q Consensus 368 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~--~------~-----~~~~~~~l~~~Gv~v~~~~~~~~lR 434 (465)
.++++++++++++.|+++. ++|.+..++|.|+++++++. . . ...+...|+++||++.+.+. +++|
T Consensus 345 ~~~~~~~g~~l~~~l~~l~-~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g~-~~i~ 422 (459)
T PRK05965 345 LANGQKAGPRFAAGLDALR-AHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAFGD-GVLG 422 (459)
T ss_pred HHHHHHHHHHHHHHHHhhc-cCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEecCC-cEEE
Confidence 9999999999999999874 68889999999999999982 1 0 24577888999999988664 7899
Q ss_pred EecCCCCcHHHHHHHHHHHHHHHHHhhhcCC
Q 012368 435 LVPPLIISEQELDQAVEILCKTLPVLDSNSN 465 (465)
Q Consensus 435 i~~~~~~t~e~i~~~l~~l~~~l~~~~~~~~ 465 (465)
++||+++|++||++++++|++++.++..+||
T Consensus 423 ~~PpL~it~~ei~~~~~~l~~~l~~~~~~~~ 453 (459)
T PRK05965 423 FAPALCCTEGEFDLIFERTRKTLDDVLADPD 453 (459)
T ss_pred EECCCcCCHHHHHHHHHHHHHHHHHHhcCcc
Confidence 9999999999999999999999998876654
No 8
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=8.3e-69 Score=542.42 Aligned_cols=379 Identities=34% Similarity=0.583 Sum_probs=332.0
Q ss_pred CceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC-CCeE
Q 012368 80 APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-ADRV 158 (465)
Q Consensus 80 ~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~v 158 (465)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++.+....+.++...+|+++|++..+ .++|
T Consensus 29 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~v 108 (451)
T PRK07678 29 ATMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPLTQSHEPAIKLAEKLNEWLGGEYVI 108 (451)
T ss_pred CCeeEEeeeeeEEEeCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCccccccCCHHHHHHHHHHHHhCCCCCEE
Confidence 389999999999999999999999999999999999999999999999987654444567788999999999886 5699
Q ss_pred EecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCC----
Q 012368 159 FFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGN---- 234 (465)
Q Consensus 159 ~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---- 234 (465)
+|++||+||++.|+|+||.||+.++.+ ++.+||.++++|||++.+++++++...++..+.|..+++..+|+++
T Consensus 109 ~f~~sGseA~e~AlklAr~~t~~~g~~---~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (451)
T PRK07678 109 FFSNSGSEANETAFKIARQYHAQKGEP---HRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRM 185 (451)
T ss_pred EEeCCcHHHHHHHHHHHHHHHHhcCCC---CCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccc
Confidence 999999999999999999998543321 4788999999999999999998877665555666666666555432
Q ss_pred -------------HHHHHhhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc
Q 012368 235 -------------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL 298 (465)
Q Consensus 235 -------------~~~le~~l~---~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~ 298 (465)
++.++++++ ++++++||+||+++++|+++|+++|+++|+++|++||++||+|||+|||||+|.+
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~ 265 (451)
T PRK07678 186 PGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKA 265 (451)
T ss_pred cccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchh
Confidence 233566674 4689999999999999999999999999999999999999999999999999998
Q ss_pred ccccccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccC------CCCcCCCCChHHHHHHHHHHHHHhcCchHHHHH
Q 012368 299 WAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY------GDHGSTFAGSPLVCNAAIAVLDKISNPAFLASV 371 (465)
Q Consensus 299 ~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~------~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~ 371 (465)
|+++++++.||++|+||+++|| +|+|++++++++++.+.+ ..|++||++||++|+|++++|++++++++++++
T Consensus 266 ~~~~~~gv~PDivt~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~~ 345 (451)
T PRK07678 266 FGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIERS 345 (451)
T ss_pred HHHHhcCCCCCEEEeecccccCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHH
Confidence 8899999999999999999998 799999999999998864 247899999999999999999999888999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC--------C---hHHHHHHHHHCCceEeecCC-----CCEEEE
Q 012368 372 SKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV--------S---ATPVVDACRDSGLLVLTAGK-----GNVVRL 435 (465)
Q Consensus 372 ~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~--------~---~~~~~~~l~~~Gv~v~~~~~-----~~~lRi 435 (465)
++++++|++.|++++++++.+..+++.|+|+.+++.. + ...+...|+++||++.+.+. ++.+||
T Consensus 346 ~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl 425 (451)
T PRK07678 346 AQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTL 425 (451)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEE
Confidence 9999999999998888899889999999999999821 1 34678889999999976531 378999
Q ss_pred ecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 436 VPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 436 ~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
+|++++|++||+++++++++++++++
T Consensus 426 ~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (451)
T PRK07678 426 SPPLVISSEEIAFIVGTLKTALERIK 451 (451)
T ss_pred ECCCcCCHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999998753
No 9
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-68 Score=539.76 Aligned_cols=379 Identities=35% Similarity=0.579 Sum_probs=342.9
Q ss_pred CCCceEEEeeec-cEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--
Q 012368 78 NRAPVVLASGKG-CKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-- 154 (465)
Q Consensus 78 ~~~p~~~~~~~G-~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-- 154 (465)
.+.|+++++++| +|+||.|||+||||.+++++.++||+||+|.+|+.+|++++.+.+..+.++...+|+++|++..+
T Consensus 61 ~~~~~~~~~~~G~~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~ 140 (459)
T PRK11522 61 GDYGAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGK 140 (459)
T ss_pred CCCCeeEEeccCeEEEEECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCC
Confidence 456889999999 99999999999999999999999999999999999999987655555678889999999999875
Q ss_pred CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCC
Q 012368 155 ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGN 234 (465)
Q Consensus 155 ~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 234 (465)
.++++|+|||+||++.|+|+|+.+|+.+ ++.+||.++++|||++.++++.++...++.++.+..+++.++|++|
T Consensus 141 ~~~v~f~~SGsEAve~AlklAr~~t~~~------gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d 214 (459)
T PRK11522 141 LKYSFFCNSGTESVEAALKLAKAYQSPR------GKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGN 214 (459)
T ss_pred CCEEEEeCCchHHHHHHHHHHHHHhccC------CCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCC
Confidence 6799999999999999999999998521 2568999999999999999998887777767777778888999999
Q ss_pred HHHHHhhcC-----CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCccc
Q 012368 235 IEATRKLIQ-----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPD 309 (465)
Q Consensus 235 ~~~le~~l~-----~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pd 309 (465)
+++++++++ .+++++||+||+++++|+++|+++||++|+++|++||++||+|||++||||+|.+|+++++++.||
T Consensus 215 ~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PD 294 (459)
T PRK11522 215 IEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPD 294 (459)
T ss_pred HHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCC
Confidence 999999885 257999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecccCCCc-cceeeEEeCHHHHhhcc--CCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Q 012368 310 IMTLAKPLAGG-LPIGAALVTEKVASAIN--YGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKL 386 (465)
Q Consensus 310 i~t~sK~lg~G-~~iG~v~~~~~i~~~~~--~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~ 386 (465)
++|+||++||| +|+|++++++++++.+. +..+++||++||++++|++++|+.++++++.+++++++++|++.|+++.
T Consensus 295 ivt~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~ 374 (459)
T PRK11522 295 ILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQLA 374 (459)
T ss_pred EEEechhhhCCCccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 79999999999998774 3468899999999999999999999888999999999999999999988
Q ss_pred HcCC-CceeeeccceEEEEEecC--ChHHHHHHHHHCCceEeecCC-CCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 387 ARNP-HVKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 387 ~~~~-~~~~~~~~g~~~~i~~~~--~~~~~~~~l~~~Gv~v~~~~~-~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
.++| .+..++|.|+++.+++.. ....+.+.|+++||++.+.+. ++++||+||+++|++|+++++++|+++++++.+
T Consensus 375 ~~~~~~i~~VrG~Gl~~giel~~~~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~~ 454 (459)
T PRK11522 375 REYPDLVQEARGKGMLMAIEFVDNEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVLKAARKALAAMRV 454 (459)
T ss_pred HhCCCceeeEEeceeEEEEEecCchHHHHHHHHHHHCCeEEEecCCCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHH
Confidence 8888 678999999999999942 245788999999999987632 478999999999999999999999999988764
No 10
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=1.6e-68 Score=535.39 Aligned_cols=371 Identities=36% Similarity=0.589 Sum_probs=332.9
Q ss_pred ceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeE
Q 012368 81 PVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRV 158 (465)
Q Consensus 81 p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v 158 (465)
++++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++.+.+..+.++...+++++|++..+ .+++
T Consensus 58 ~~~~~~~~g~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v 137 (442)
T TIGR03372 58 AVEWQAGGLNTLIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGKLKYS 137 (442)
T ss_pred eeEEEeCCeeEEEECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCCcCEE
Confidence 34556777799999999999999999999999999999999999999987655445567889999999999886 5789
Q ss_pred EecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHH
Q 012368 159 FFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEAT 238 (465)
Q Consensus 159 ~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 238 (465)
+|+|||+||++.|+|+|+.++..+ ++.+||.++++|||++.+++++++.+.++..+.|..+++.++|++|.+++
T Consensus 138 ~f~~SGsEA~e~AlklAr~~t~~~------gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~ 211 (442)
T TIGR03372 138 FFCNSGTESVEAALKLAKAYQSPR------GKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAM 211 (442)
T ss_pred EEeCCchHHHHHHHHHHHHHHhhc------CCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHH
Confidence 999999999999999999997311 36789999999999999999998877666677777888999999999988
Q ss_pred HhhcC-----CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEe
Q 012368 239 RKLIQ-----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTL 313 (465)
Q Consensus 239 e~~l~-----~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~ 313 (465)
++.++ .+++++||+||+++++|+++|+++||++|+++|++||+++|+||||+||||+|.+|+++++++.||++|+
T Consensus 212 ~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~ 291 (442)
T TIGR03372 212 LKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCL 291 (442)
T ss_pred HHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCeeee
Confidence 88774 3579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCc-cceeeEEeCHHHHhhcc--CCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCC
Q 012368 314 AKPLAGG-LPIGAALVTEKVASAIN--YGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNP 390 (465)
Q Consensus 314 sK~lg~G-~~iG~v~~~~~i~~~~~--~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 390 (465)
||+++|| +|+|++++++++++.+. +..+++||++||++++|++++|++++++++.++++++++++++.|+++..++|
T Consensus 292 gK~lg~G~~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~ 371 (442)
T TIGR03372 292 AKALGGGVMPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYP 371 (442)
T ss_pred hhhhcCCcccceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999 79999999999998883 34688999999999999999999998889999999999999999999988888
Q ss_pred -CceeeeccceEEEEEecC--ChHHHHHHHHHCCceEeecCC-CCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 391 -HVKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 391 -~~~~~~~~g~~~~i~~~~--~~~~~~~~l~~~Gv~v~~~~~-~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
.+..++|.|+|+++++.. ....+.+.|+++||++.+.+. ++.+||+||+++|++|+|+++++|++++
T Consensus 372 ~~i~~vRG~Gl~~giel~~~~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 372 DLIIEARGKGLLMAIEFRDNEIGYAFAKELFQQNILVAGTLNNAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred CceEEEecceEEEEEEeCChHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 778999999999999943 346788999999999976532 4789999999999999999999998764
No 11
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=6.4e-68 Score=535.11 Aligned_cols=397 Identities=30% Similarity=0.504 Sum_probs=339.9
Q ss_pred chHHHHHHHHhccccccCC-------CceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccc
Q 012368 61 NNKEVMEAEKKLLVGTYNR-------APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHV 133 (465)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~-------~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~ 133 (465)
.++++.+...++.++++.. .|+++++++|+++||.|||+||||.+++++.++||+||+|.+|+.+|++++.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~ 89 (453)
T PRK06943 10 ATDDWVARSLRAVWHPCTQMKHHERLPLLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHA 89 (453)
T ss_pred chhhHHHHhhcccccCCcCccccccCCCceEEecccCEEEeCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCc
Confidence 3444554444444333222 478999999999999999999999999999999999999999999999987554
Q ss_pred cC-CCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccc
Q 012368 134 SN-MYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALAL 210 (465)
Q Consensus 134 ~~-~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~ 210 (465)
.. .+.++...+|+++|++..+ .++++|++||+||++.|+|+|+.++..++. +++.+||.++.+|||.+.+++++
T Consensus 90 ~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~---~~r~~Ii~~~~~yHG~t~gals~ 166 (453)
T PRK06943 90 MLAGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGR---GDKREFVCLANGYHGETIGALGV 166 (453)
T ss_pred cccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCC---CCCCEEEEECCCcCCCcHHhhcc
Confidence 33 4567889999999999886 479999999999999999999987643322 14788999999999999999999
Q ss_pred cCCCCcCCCCCCCCCCceEeeCCC-----------------HHHHHhhcC--CCCeEEEEEcc-cCCCCCcccCCHHHHH
Q 012368 211 TSKEHYRSPFEPVMPGVNFVEYGN-----------------IEATRKLIQ--PGKTAAVFVEP-IQGEGGIYSATKEFLQ 270 (465)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~l~--~~~~a~vi~ep-~~~~~G~~~~~~~~l~ 270 (465)
++...++..|.|..+++.++|+++ +++++++++ .+++++||+|| +++++|+++++++|++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~ 246 (453)
T PRK06943 167 TDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLR 246 (453)
T ss_pred cCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHH
Confidence 887766666666656655555432 477888885 46899999999 5999999999999999
Q ss_pred HHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccCC------CCcC
Q 012368 271 FLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYG------DHGS 343 (465)
Q Consensus 271 ~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~------~~~~ 343 (465)
+|+++|++||++||+|||+|||||+|.+|+++++++.||++|+||+++|| +|+|++++++++++.+... .+++
T Consensus 247 ~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~ 326 (453)
T PRK06943 247 GLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSH 326 (453)
T ss_pred HHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEeeehhhccCcccceEEEEcHHHHHhhcccCccCCccCCC
Confidence 99999999999999999999999999999999999999999999999999 6999999999999887531 3788
Q ss_pred CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEec--CC-----hHHHHHH
Q 012368 344 TFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFD--VS-----ATPVVDA 416 (465)
Q Consensus 344 t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~--~~-----~~~~~~~ 416 (465)
||++||++|+|++++|+++++++++++++++++++++.|+++ .+++.+..+++.|+|+.+++. .. ...+...
T Consensus 327 T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l-~~~~~v~~vrG~Gl~~gvel~~~~~~~~~~~~~i~~~ 405 (453)
T PRK06943 327 SYTGNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPL-AAHPQVRHLRQRGTIFAFDVALDGDAARTFSRRFFEA 405 (453)
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-hcCCCEEeEeccccEEEEEEccCCCcchHHHHHHHHH
Confidence 999999999999999999998999999999999999999987 457888899999999999983 11 3467888
Q ss_pred HHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhhc
Q 012368 417 CRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDSN 463 (465)
Q Consensus 417 l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 463 (465)
|+++||++.+.+ +.+||+||+++|++||++++++|+++++++..+
T Consensus 406 ~~~~Gll~~~~g--~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~~ 450 (453)
T PRK06943 406 ALERELLLRPIG--TTVYLMPPYVLDDDEIAWLAERTRATLDATLAE 450 (453)
T ss_pred HHHCCcEEEecC--CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999998765 679999999999999999999999999887443
No 12
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=6.6e-69 Score=497.35 Aligned_cols=369 Identities=37% Similarity=0.643 Sum_probs=328.3
Q ss_pred ccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC-
Q 012368 76 TYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF- 154 (465)
Q Consensus 76 ~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~- 154 (465)
++...|++|++++|+|+||.+|++|||+.+|..+.++||+||+|.+|+.+|+.++.|....+.+++..++|++|...++
T Consensus 28 ~~~~~Pl~Iv~~~~~ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~~~~~pi~~~Ae~L~s~~P~ 107 (442)
T KOG1404|consen 28 SYYKKPLVIVRGEGQYLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSGYLNPPIHDLAEALVSKLPG 107 (442)
T ss_pred ccccCCceEEecceEEEEcCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeeccccCCcHHHHHHHHHHhCCC
Confidence 3446799999999999999999999999999999999999999999999999888777778889999999999999986
Q ss_pred -CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceE----
Q 012368 155 -ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNF---- 229 (465)
Q Consensus 155 -~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 229 (465)
...++|+|||+|||++|+++++.||+ .-+||.+..+|||.+..++++++...++.++.....++..
T Consensus 108 ~l~~vfF~nsGsEANelal~mar~Yt~---------~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~P 178 (442)
T KOG1404|consen 108 DLKVVFFVNSGSEANELALKMARLYTG---------NLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNP 178 (442)
T ss_pred CceEEEEecCCchHHHHHHHHHHHhcC---------CceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCC
Confidence 77899999999999999999999996 6789999999999999999998877666544332223221
Q ss_pred ----eeCCC----------HHHHHhhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 230 ----VEYGN----------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 230 ----~~~~d----------~~~le~~l~---~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
-++.+ .+++++.+. ++++|++|.||+++.||++.++++||+++.++|+++|.++|.||||+||
T Consensus 179 dp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGf 258 (442)
T KOG1404|consen 179 DPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGF 258 (442)
T ss_pred CcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcc
Confidence 12221 255666664 5679999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCC-CcCCCCChHHHHHHHHHHHHHhcCchHHHHH
Q 012368 293 GRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGD-HGSTFAGSPLVCNAAIAVLDKISNPAFLASV 371 (465)
Q Consensus 293 gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~-~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~ 371 (465)
||+|.+|.++..++.|||+|++|++|+|+|+|+++..++|++.+.... +..||++||+++++++++|++++++++.++.
T Consensus 259 GRtG~~wgfe~h~v~PDIvTmAKgiGnG~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~LqE~a 338 (442)
T KOG1404|consen 259 GRTGHMWGFESHGVVPDIVTMAKGIGNGFPLGAVVTTPEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQENA 338 (442)
T ss_pred ccccccccccccCCCccHHHHHhhccCCCcceeeecCHHHHHHHHhccccccccCCCchhHHHHHHHHHHHHHHhHHHHH
Confidence 999999999999999999999999999999999999999999997654 8999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEe-c-C---------ChHHHHHHHHHCCceEeecCC-CCEEEEecCC
Q 012368 372 SKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEF-D-V---------SATPVVDACRDSGLLVLTAGK-GNVVRLVPPL 439 (465)
Q Consensus 372 ~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~-~-~---------~~~~~~~~l~~~Gv~v~~~~~-~~~lRi~~~~ 439 (465)
.+.+.+|++.|.++.+++|.+.++||+|+|+++++ + . ....+.+.|.++|+++.-++. |+++||.||+
T Consensus 339 a~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~vfriaPPl 418 (442)
T KOG1404|consen 339 AEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGNVFRIAPPL 418 (442)
T ss_pred HHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccceEEEecCCe
Confidence 99999999999999999999999999999999998 2 1 123577889999999976654 7899999999
Q ss_pred CCcHHHHHHHHHHH
Q 012368 440 IISEQELDQAVEIL 453 (465)
Q Consensus 440 ~~t~e~i~~~l~~l 453 (465)
++|++|++.+++..
T Consensus 419 ciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 419 CITKEDIDFAVEYF 432 (442)
T ss_pred eccHHHHHHHHHHH
Confidence 99999997777655
No 13
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=7.6e-68 Score=535.55 Aligned_cols=377 Identities=32% Similarity=0.549 Sum_probs=329.1
Q ss_pred ccccC-CCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcc-cccCCCCCHHHHHHHHHHHh
Q 012368 74 VGTYN-RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLT-HVSNMYYSIPQIELAKRLVA 151 (465)
Q Consensus 74 ~~~~~-~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~la~~l~~ 151 (465)
.+.|. +.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|+++.. +....+.++...+|+++|.+
T Consensus 38 ~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~ 117 (464)
T PRK06938 38 ARSYPRRIPLALKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFA 117 (464)
T ss_pred ccccccCCCceEEeccccEEEeCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHH
Confidence 33442 57899999999999999999999999999999999999999999999997533 22224567888999999998
Q ss_pred hcCC-----CeEEec-CCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCC
Q 012368 152 CSFA-----DRVFFS-NTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMP 225 (465)
Q Consensus 152 ~~~~-----~~v~~~-~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~ 225 (465)
..+. ++++|+ |||+||++.|+|+||.+|+ +.+||.++++|||++.+++++++...++..+.+..+
T Consensus 118 ~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tg---------r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~ 188 (464)
T PRK06938 118 SLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATG---------RSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLP 188 (464)
T ss_pred hCcccccccceEEEeCCCcHHHHHHHHHHHHHhhC---------CCeEEEECCccCCccHHHHhhcCCccccccCCCCCC
Confidence 8752 367675 8999999999999999874 889999999999999999998876555555555556
Q ss_pred CceEeeCC-----------------CHHHHHhhcCC-----CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEE
Q 012368 226 GVNFVEYG-----------------NIEATRKLIQP-----GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALL 283 (465)
Q Consensus 226 ~~~~~~~~-----------------d~~~le~~l~~-----~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~ll 283 (465)
++.++|++ +++.+++++.. +++++||+||+++++|+++|+++|+++|+++|++||++|
T Consensus 189 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLl 268 (464)
T PRK06938 189 GVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPL 268 (464)
T ss_pred CcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 66666543 25678888862 369999999999999999999999999999999999999
Q ss_pred EEeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhc
Q 012368 284 VFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKIS 363 (465)
Q Consensus 284 I~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~ 363 (465)
|+|||+|||||+|.+|+++++++.|||+|+||+++||+|+|++++++++ +.+.+..+++||++||++|+|++++|++++
T Consensus 269 I~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gKglggG~PlsAv~~~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~ 347 (464)
T PRK06938 269 IVDEIQSGFGRTGKMFAFEHAGIIPDVVVLSKAIGGSLPLAVVVYREWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIK 347 (464)
T ss_pred EEeccccCCCcCcHHHHHHhcCCCCCEEEeeccccCCCceEEEeehhHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999885 777666789999999999999999999998
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCC----------------hHHHHHHHHHCCceEeec
Q 012368 364 NPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS----------------ATPVVDACRDSGLLVLTA 427 (465)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~----------------~~~~~~~l~~~Gv~v~~~ 427 (465)
++++++++++++++|++.|+++.+++|.+..++|.|+|+++++..+ ...+...|+++|+++.+.
T Consensus 348 ~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~ 427 (464)
T PRK06938 348 EHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELG 427 (464)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeec
Confidence 8999999999999999999999888999999999999999998211 235778889999999876
Q ss_pred CC-CCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 428 GK-GNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 428 ~~-~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
+. ++++||.||+++|++|++++++++++++.++
T Consensus 428 g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 428 GRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred CCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 52 5899999999999999999999999999875
No 14
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-67 Score=532.54 Aligned_cols=384 Identities=35% Similarity=0.610 Sum_probs=333.2
Q ss_pred ccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHhhcC
Q 012368 76 TYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF 154 (465)
Q Consensus 76 ~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~ 154 (465)
.+...|+++++++|+|+||.||++||||.+++++.++||+||+|.+|+.++++++.+... .+.++...+|+++|++..+
T Consensus 8 ~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p 87 (443)
T PRK07483 8 SPRATLPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAP 87 (443)
T ss_pred cccCCCceEEeceEEEEEeCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCC
Confidence 344579999999999999999999999999999999999999999999999998654322 3567778999999999875
Q ss_pred --CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC
Q 012368 155 --ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY 232 (465)
Q Consensus 155 --~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (465)
.++++|++||+||++.|+|+|+.|+...+.+ ++.+||.++.+|||++.+++++++...++..+.|..+++.++|+
T Consensus 88 ~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~---~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~ 164 (443)
T PRK07483 88 AGLEHVYFVSGGSEAVEAALKLARQYFVEIGQP---QRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSP 164 (443)
T ss_pred CCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCC---CCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCC
Confidence 6899999999999999999999985432211 47789999999999999999988776655556666566555542
Q ss_pred ----CC--------------HHHHHhhcC---CCCeEEEEEcccCC-CCCcccCCHHHHHHHHHHHHHhCCEEEEecccc
Q 012368 233 ----GN--------------IEATRKLIQ---PGKTAAVFVEPIQG-EGGIYSATKEFLQFLRDACDDAGALLVFDEVQC 290 (465)
Q Consensus 233 ----~d--------------~~~le~~l~---~~~~a~vi~ep~~~-~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~ 290 (465)
++ ++++++++. .+++++||+||+++ ++|.++++++||++|+++|++||++||+|||+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t 244 (443)
T PRK07483 165 CYAYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMC 244 (443)
T ss_pred CccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEeccee
Confidence 33 256777663 35799999999998 579999999999999999999999999999999
Q ss_pred CCCCCCccccccccCCcccEEEecccCCCcc-ceeeEEeCHHHHhhccCC----CCcCCCCChHHHHHHHHHHHHHhcCc
Q 012368 291 GLGRTGYLWAHEHYGIFPDIMTLAKPLAGGL-PIGAALVTEKVASAINYG----DHGSTFAGSPLVCNAAIAVLDKISNP 365 (465)
Q Consensus 291 g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~-~iG~v~~~~~i~~~~~~~----~~~~t~~~~~~~~~aa~a~L~~~~~~ 365 (465)
||||+|.+|+++++++.|||+|+||+++||+ |+|++++++++++.+... .|++||++||++|+|++++|++++++
T Consensus 245 GfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~ 324 (443)
T PRK07483 245 GMGRTGTLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAED 324 (443)
T ss_pred CcccCcHHHHHhhcCCCCCeeeehhhhccCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999995 999999999999988642 47899999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCC-------------hHHHHHHHHHCCceEeecCC---
Q 012368 366 AFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS-------------ATPVVDACRDSGLLVLTAGK--- 429 (465)
Q Consensus 366 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~-------------~~~~~~~l~~~Gv~v~~~~~--- 429 (465)
++++++++++++|++.|+++.+++|.+..++|.|+|+++++..+ ...+.+.|+++||++.+.+.
T Consensus 325 ~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~ 404 (443)
T PRK07483 325 GLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTID 404 (443)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCcccc
Confidence 99999999999999999998888998899999999999998211 24578889999999987531
Q ss_pred ---CCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 430 ---GNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 430 ---~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
++++||.||+++|++|||+++++|++++.++..
T Consensus 405 ~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 405 GVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 478999999999999999999999999987653
No 15
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-67 Score=530.98 Aligned_cols=384 Identities=31% Similarity=0.565 Sum_probs=331.8
Q ss_pred HHHHHhccccccCC----CceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHH
Q 012368 66 MEAEKKLLVGTYNR----APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIP 141 (465)
Q Consensus 66 ~~~~~~~~~~~~~~----~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~ 141 (465)
++...++.+++|.+ .|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.++++++.+....+.++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~ 96 (451)
T PRK06062 17 YALDRAHVFHSWSAQGKINPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPAHANDA 96 (451)
T ss_pred HHhhhhhccccccccccCCCceEEeceeeEEEECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCCccCCHH
Confidence 33334444444433 58999999999999999999999999999999999999999999999998766555667888
Q ss_pred HHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCC
Q 012368 142 QIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSP 219 (465)
Q Consensus 142 ~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 219 (465)
..+|+++|++..+ .++|+|++||+||++.|+|+||.+|+ |.+||.++++|||++.+++++++.+....
T Consensus 97 ~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~tg---------r~~ii~~~~~yHG~t~~als~~~~~~~~~- 166 (451)
T PRK06062 97 RSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTG---------RPKVLSAYRSYHGGTGSAINLTGDPRRWP- 166 (451)
T ss_pred HHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHhhC---------CceEEEEeCCCCCCCHHHHhhcCCccccc-
Confidence 9999999999885 68999999999999999999999974 78999999999999999998876543321
Q ss_pred CCCCCCCceEe--------eC---CC-------HHHHHhhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHH
Q 012368 220 FEPVMPGVNFV--------EY---GN-------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDD 278 (465)
Q Consensus 220 ~~~~~~~~~~~--------~~---~d-------~~~le~~l~---~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~ 278 (465)
..+..+++..+ ++ +| +++++++++ ++++++||+||+++++|+++|+++||++|+++|++
T Consensus 167 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~ 246 (451)
T PRK06062 167 NDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDR 246 (451)
T ss_pred CCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHH
Confidence 12333333322 12 23 677888885 35799999999999999999999999999999999
Q ss_pred hCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccCC--CCcCCCCChHHHHHHH
Q 012368 279 AGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYG--DHGSTFAGSPLVCNAA 355 (465)
Q Consensus 279 ~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~--~~~~t~~~~~~~~~aa 355 (465)
||++||+|||++||||+|.+|+++++++.||++|+||+++|| +|+|++++++++++.+... .+++||++||++|+|+
T Consensus 247 ~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa 326 (451)
T PRK06062 247 HGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAA 326 (451)
T ss_pred cCCEEEeeccccCCCcCcHHHHHHhcCCCCCeeeechhhhcCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999 4999999999999988643 5778999999999999
Q ss_pred HHHHHHhcCchHHHHHHHHH-HHHHHHHHHHHHcCCCceeeeccceEEEEEecC--C--------------hHHHHHHHH
Q 012368 356 IAVLDKISNPAFLASVSKKG-HYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV--S--------------ATPVVDACR 418 (465)
Q Consensus 356 ~a~L~~~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~--~--------------~~~~~~~l~ 418 (465)
+++|++++++++++++++++ +++++.|+++..++|.+..+++.|+|+++++.. . ...+.+.|+
T Consensus 327 ~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 406 (451)
T PRK06062 327 VATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACK 406 (451)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHH
Confidence 99999998888999999999 699999999988889889999999999999831 1 346788899
Q ss_pred HCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 419 DSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 419 ~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
++||++.+.+ +.+||+||+++|++||++++++++++++.++
T Consensus 407 ~~Gvl~~~~~--~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 407 ERGLLPFVNG--NRIHVVPPCTVTEDEVREGLAILDAALAVAD 447 (451)
T ss_pred HCCcEEeecC--CEEEEECCccCCHHHHHHHHHHHHHHHHHhh
Confidence 9999987643 7899999999999999999999999998765
No 16
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=3.9e-67 Score=530.20 Aligned_cols=377 Identities=30% Similarity=0.529 Sum_probs=329.5
Q ss_pred ceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHhhcC-----
Q 012368 81 PVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF----- 154 (465)
Q Consensus 81 p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~----- 154 (465)
|+.+++++|+|+||.|||+||||++++++.++||+||+|.+|+.+|++++.+... .+.++...+|+++|++..+
T Consensus 47 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~ 126 (472)
T PRK08742 47 LVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFTHEPAVQLAEQLLAIAPRQDGR 126 (472)
T ss_pred CeeEEecccCEEEeCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCcccC
Confidence 4679999999999999999999999999999999999999999999987655433 4567889999999999874
Q ss_pred --CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC
Q 012368 155 --ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY 232 (465)
Q Consensus 155 --~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (465)
.++|+|++||+||++.|+|+|+.|+..+++. ++.+||.++++|||++.+++++++.+.++..+.|..+++.++|+
T Consensus 127 ~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~---~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~ 203 (472)
T PRK08742 127 APLSKVFYADNGSAGVEVALKMAFHYFHNRGEH---RRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPS 203 (472)
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCC---CCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCC
Confidence 3699999999999999999999997543322 47899999999999999999998776666666666666666665
Q ss_pred CC-----------------HHHHHhhcC--CCCeEEEEEcc-cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 233 GN-----------------IEATRKLIQ--PGKTAAVFVEP-IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 233 ~d-----------------~~~le~~l~--~~~~a~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
++ ++.+++++. .+++++||+|| +++++|+++++++|+++|+++|++||++||+|||+|||
T Consensus 204 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGf 283 (472)
T PRK08742 204 PDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGF 283 (472)
T ss_pred CCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 43 466777774 45899999999 69999999999999999999999999999999999999
Q ss_pred CCCCccccccccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccC------CCCcCCCCChHHHHHHHHHHHHHhcCc
Q 012368 293 GRTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY------GDHGSTFAGSPLVCNAAIAVLDKISNP 365 (465)
Q Consensus 293 gr~g~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~------~~~~~t~~~~~~~~~aa~a~L~~~~~~ 365 (465)
||+|.+|+++++++.|||+|+||+++|| +|+|++++++++++.+.. ..|++||++||++|+|+.++|++++++
T Consensus 284 GRtG~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~ 363 (472)
T PRK08742 284 GRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADD 363 (472)
T ss_pred CCCccchHHHhcCCCCCEEEEcccccCCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999999999999 599999999999987742 247899999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC--C-----------hHHHHHHHHHCCceEeecCCCCE
Q 012368 366 AFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV--S-----------ATPVVDACRDSGLLVLTAGKGNV 432 (465)
Q Consensus 366 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~--~-----------~~~~~~~l~~~Gv~v~~~~~~~~ 432 (465)
++.++++++++++++.++. +.+++.+.++++.|+++++++.. . ...+.+.|+++||++.+.+ ++
T Consensus 364 ~l~~~~~~~g~~l~~~~~~-~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g--~v 440 (472)
T PRK08742 364 DVIARNQPTAARMTQLAAQ-IGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPLG--DV 440 (472)
T ss_pred CHHHHHHHHHHHHHHHHHH-HhcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEecC--CE
Confidence 9999999999999976665 46789899999999999999821 1 1356788899999998864 79
Q ss_pred EEEecCCCCcHHHHHHHHHHHHHHHHHhhhc
Q 012368 433 VRLVPPLIISEQELDQAVEILCKTLPVLDSN 463 (465)
Q Consensus 433 lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 463 (465)
+||.||+++|++||++++++|+++++++-.+
T Consensus 441 i~~~PpL~it~~ei~~~~~~l~~~l~~~~~~ 471 (472)
T PRK08742 441 LYWMPPYCVDEAQLALLADTTRHAIDEAVAC 471 (472)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999887554
No 17
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=3.7e-67 Score=530.67 Aligned_cols=373 Identities=35% Similarity=0.577 Sum_probs=324.7
Q ss_pred CCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHhhcC---
Q 012368 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF--- 154 (465)
Q Consensus 79 ~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~--- 154 (465)
+.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.++++++.+... .+.++...+++++|++..+
T Consensus 37 ~~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~ 116 (443)
T PRK06058 37 TLPVYVARAGGGIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTCFMVTPYEGYVAVAEQLNRLTPGDH 116 (443)
T ss_pred CCCceEEeeeeeEEEeCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCC
Confidence 468999999999999999999999999999999999999999999999988654322 2456778899999999875
Q ss_pred CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC-CCcCCCCCCCCCCceEee--
Q 012368 155 ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYRSPFEPVMPGVNFVE-- 231 (465)
Q Consensus 155 ~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-- 231 (465)
.++++|++||+||++.|+|+|+.+++ +++||.++++|||++.+++++++. ..+...+.+..+++..+|
T Consensus 117 ~~~v~f~~sGseA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (443)
T PRK06058 117 EKRSALFNSGAEAVENAVKIARSYTG---------RQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMS 187 (443)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHhhC---------CCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCC
Confidence 36999999999999999999999975 789999999999999999887753 223333444444444332
Q ss_pred --CCC---------------HHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCC
Q 012368 232 --YGN---------------IEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGR 294 (465)
Q Consensus 232 --~~d---------------~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr 294 (465)
+++ ++.+++.+..+++++||+||+++++|+++|+++||++|+++|++||++||+|||++||||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgR 267 (443)
T PRK06058 188 YPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFAR 267 (443)
T ss_pred cccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 222 233455555568999999999999999999999999999999999999999999999999
Q ss_pred CCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHH
Q 012368 295 TGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKK 374 (465)
Q Consensus 295 ~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~ 374 (465)
+|.+|+++++++.||++|+||++++|+|+|++++++++++.+....+++||++||++|+|++++|+.++++++.++++++
T Consensus 268 tG~~fa~~~~gv~PDiv~~gK~l~~G~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~ 347 (443)
T PRK06058 268 TGAWFACEHEGIVPDLITTAKGIAGGLPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALAAIETIEEDDLVARARQI 347 (443)
T ss_pred ChhhhHHHhcCCCCCEEEEcccccCCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999987778999999999999999999999888999999999
Q ss_pred HHHHHHHHHHHHHcCCCceeeeccceEEEEEecCC---------hHHHHHHHHHCCceEeecCC-CCEEEEecCCCCcHH
Q 012368 375 GHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS---------ATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQ 444 (465)
Q Consensus 375 ~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~---------~~~~~~~l~~~Gv~v~~~~~-~~~lRi~~~~~~t~e 444 (465)
++++++.|+++..+++.+..++|.|+|+.+++..+ ...+.+.|+++||++.+.+. ++++||.||+++|++
T Consensus 348 g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~Ppl~~t~~ 427 (443)
T PRK06058 348 EALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGTYGNVIRLLPPLVIGDE 427 (443)
T ss_pred HHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCccCHH
Confidence 99999999998888898899999999999998211 34577788899999987643 579999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 012368 445 ELDQAVEILCKTLPVL 460 (465)
Q Consensus 445 ~i~~~l~~l~~~l~~~ 460 (465)
+|++++++|+++++++
T Consensus 428 ~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 428 LLREGLDVLEAALADL 443 (443)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999998753
No 18
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=2.3e-67 Score=531.63 Aligned_cols=377 Identities=34% Similarity=0.614 Sum_probs=329.2
Q ss_pred CceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC--CCCCHHHHHHHHHHHhhcC---
Q 012368 80 APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN--MYYSIPQIELAKRLVACSF--- 154 (465)
Q Consensus 80 ~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~la~~l~~~~~--- 154 (465)
.|+++++++|+|+||.|||+||||.++++++++||+||+|.+|+.+|++++.+... .+.++...+++++|++..+
T Consensus 24 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~ 103 (449)
T PRK07481 24 PPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEG 103 (449)
T ss_pred CCceEEeccccEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCC
Confidence 58999999999999999999999999999999999999999999999998655422 3567889999999999873
Q ss_pred CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEee---
Q 012368 155 ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVE--- 231 (465)
Q Consensus 155 ~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 231 (465)
.++++|++||+||++.|+|+||.|++..+.+ ++.+||.++++|||++.+++++++...+...+.|..+++..++
T Consensus 104 ~~~v~f~~sGsEAve~AlklAr~~~~~~g~~---~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~ 180 (449)
T PRK07481 104 MRRVFFSSGGSDSVETALKLARQYWKVRGQP---ERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPW 180 (449)
T ss_pred CCEEEEcCchHHHHHHHHHHHHHHHHhcCCC---CCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCc
Confidence 5799999999999999999999998543322 4788999999999999999988876665555566666665443
Q ss_pred -----CC--CHHH--------HHhhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 232 -----YG--NIEA--------TRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 232 -----~~--d~~~--------le~~l~---~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
++ |+++ +|+++. ++++++||+||+++++|+++++++|+++|+++|++||++||+|||+||||
T Consensus 181 ~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfG 260 (449)
T PRK07481 181 LYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFG 260 (449)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcC
Confidence 33 5444 344443 35799999999999999999999999999999999999999999999999
Q ss_pred CCCccccccccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccC-------CCCcCCCCChHHHHHHHHHHHHHhcCc
Q 012368 294 RTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY-------GDHGSTFAGSPLVCNAAIAVLDKISNP 365 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~-------~~~~~t~~~~~~~~~aa~a~L~~~~~~ 365 (465)
|+|.+|+++++++.|||+|+||+++|| +|+|++++++++++.+.. ..|++||++||++|+|++++|++++++
T Consensus 261 RtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~ 340 (449)
T PRK07481 261 RTGSWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVRE 340 (449)
T ss_pred cCchhhHhhhcCCCCCEEEEeecccCCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999 599999999999998853 257899999999999999999999889
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCC-------------hHHHHHHHHHCCceEeecCCCCE
Q 012368 366 AFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS-------------ATPVVDACRDSGLLVLTAGKGNV 432 (465)
Q Consensus 366 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~-------------~~~~~~~l~~~Gv~v~~~~~~~~ 432 (465)
+++++++++++++++.|+++..++|.+..++|.|+|+++++..+ ...+...|+++||++.+.+ +.
T Consensus 341 ~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g--~~ 418 (449)
T PRK07481 341 DLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPSG--TK 418 (449)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEecC--CE
Confidence 99999999999999999999888999999999999999998211 2357778899999998865 56
Q ss_pred EEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 433 VRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 433 lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
+||+||+++|++|||+++++|+++++++.
T Consensus 419 i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 447 (449)
T PRK07481 419 IILSPPLVIQREDVDRIVDALDAGLSAVP 447 (449)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 89999999999999999999999998754
No 19
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=9.5e-67 Score=527.45 Aligned_cols=390 Identities=33% Similarity=0.561 Sum_probs=332.0
Q ss_pred hHHHHHHHHhc--cccccC-CCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccc-cCCC
Q 012368 62 NKEVMEAEKKL--LVGTYN-RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHV-SNMY 137 (465)
Q Consensus 62 ~~~~~~~~~~~--~~~~~~-~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~-~~~~ 137 (465)
.+.+++...++ ..+.|. +.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+++.+..+. ...+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~~~ 98 (459)
T PRK06931 19 NETYLARQAEFESNVRSYPRKLPLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDL 98 (459)
T ss_pred hHHHHHHHHhhhhhccccccCCCceEEeccccEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhcccccccc
Confidence 34455444322 344443 5689999999999999999999999999999999999999999999999863322 2235
Q ss_pred CCHHHHHHHHHHHhhcC-C----CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccC
Q 012368 138 YSIPQIELAKRLVACSF-A----DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (465)
Q Consensus 138 ~~~~~~~la~~l~~~~~-~----~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (465)
.++...+++++|++..+ . ..++++|||+||++.|+|+|+.+|+ |++||.++++|||++.+++++++
T Consensus 99 ~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tg---------r~~Ii~~~~~yHG~t~~als~t~ 169 (459)
T PRK06931 99 TTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTG---------RSNVISFSGGYHGMTHGALAVTG 169 (459)
T ss_pred CCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcC---------CCeEEEECCCcCCccHHHHhhcC
Confidence 67778999999999875 2 2346669999999999999999975 88999999999999999998887
Q ss_pred CCCcCCCCCCCCCCceEeeCCC-------------HHHH----HhhcC-----CCCeEEEEEcccCCCCCcccCCHHHHH
Q 012368 213 KEHYRSPFEPVMPGVNFVEYGN-------------IEAT----RKLIQ-----PGKTAAVFVEPIQGEGGIYSATKEFLQ 270 (465)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d-------------~~~l----e~~l~-----~~~~a~vi~ep~~~~~G~~~~~~~~l~ 270 (465)
...++..+.+..+++.++|+++ .+++ ++.+. .+++++||+||+++++|+++++++||+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~ 249 (459)
T PRK06931 170 NLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQ 249 (459)
T ss_pred CcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHH
Confidence 6666555666667777776653 2222 33332 246999999999999999999999999
Q ss_pred HHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHH
Q 012368 271 FLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPL 350 (465)
Q Consensus 271 ~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~ 350 (465)
+|+++|++||++||+|||+|||||+|.+|+++++++.|||+|+||+++||+|+|++++++++ +.+.+..+++||++||+
T Consensus 250 ~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~gK~l~gG~Pi~av~~~~~~-~~~~~~~~~~T~~gnpl 328 (459)
T PRK06931 250 KIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVMSKAVGGGLPLAVLGIKKEF-DAWQPGGHTGTFRGNQL 328 (459)
T ss_pred HHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEecccccCCcceeeeeeHHHH-hhccCCCCCCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999988774 77766678999999999
Q ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCC----------------hHHHH
Q 012368 351 VCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS----------------ATPVV 414 (465)
Q Consensus 351 ~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~----------------~~~~~ 414 (465)
+|+|++++|++++++++++++++++++|++.|+++.+++|.+..++|.|+|+++++..+ ...+.
T Consensus 329 a~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~ 408 (459)
T PRK06931 329 AMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQ 408 (459)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHH
Confidence 99999999999988999999999999999999999888999999999999999998211 23577
Q ss_pred HHHHHCCceEeecCC-CCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 415 DACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 415 ~~l~~~Gv~v~~~~~-~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
..|+++||++.+.+. ++++||.||+++|++|+++++++|+++++++-
T Consensus 409 ~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~ 456 (459)
T PRK06931 409 KACFENGLLLERGGRNGNVVRLLPPLLITQAECEEFIDRFEQALLAAV 456 (459)
T ss_pred HHHHHCCcEEeecCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 788999999987543 58999999999999999999999999998754
No 20
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=1.3e-66 Score=519.80 Aligned_cols=383 Identities=42% Similarity=0.721 Sum_probs=343.6
Q ss_pred ccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC-
Q 012368 76 TYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF- 154 (465)
Q Consensus 76 ~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~- 154 (465)
.+.+.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|+++..+....+.+++..+++++|++..+
T Consensus 18 ~~~~~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~ 97 (408)
T PRK04612 18 VYRPRQVVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAPPLKLAEELVTASRF 97 (408)
T ss_pred ccCCCCceEEEeeeCEEEECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhCCC
Confidence 3557889999999999999999999999999999999999999999999999986655444567778999999999875
Q ss_pred CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCC
Q 012368 155 ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGN 234 (465)
Q Consensus 155 ~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 234 (465)
.++++|++||+||++.|+|+|+.|+..++.. +++.+||.++++|||++.++++.++.+.++..+.+..+++..+|++|
T Consensus 98 ~~~v~f~~sGseA~e~AlklAr~~~~~~g~~--~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d 175 (408)
T PRK04612 98 AEKVFLCNSGTEANEAAIKLVRKWASSQGRP--ADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFND 175 (408)
T ss_pred CCEEEEcCchHHHHHHHHHHHHHHHHhhCCC--CCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCC
Confidence 5899999999999999999999997433211 13668999999999999999988877766666666667778889999
Q ss_pred HHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec
Q 012368 235 IEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA 314 (465)
Q Consensus 235 ~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s 314 (465)
++.+++++.++++++||+||+++++|+++++++|+++|+++|++||+++|+||||+||||+|.+++...+++.||++|||
T Consensus 176 ~~~l~~~~~~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~ 255 (408)
T PRK04612 176 VEALEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLA 255 (408)
T ss_pred HHHHHHhhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEc
Confidence 99999999767899999999999999999999999999999999999999999999999999887777789999999999
Q ss_pred ccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCcee
Q 012368 315 KPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKD 394 (465)
Q Consensus 315 K~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 394 (465)
|++++|+|+|++++++++++.+....+.+||++||++++++.++|+.++++++.++++++++++++.|+++..+++.+..
T Consensus 256 K~l~~G~piga~~~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~ 335 (408)
T PRK04612 256 KALGGGFPIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEFGVFAQ 335 (408)
T ss_pred chhcCCCceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCeee
Confidence 99999999999999999998887767889999999999999999999988899999999999999999999888898999
Q ss_pred eeccceEEEEEecC----ChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 395 VRGLGLIIGIEFDV----SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 395 ~~~~g~~~~i~~~~----~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
++|.|+|+++++.. .+..+.+.|+++||++.+.+. +.+|+.|++.+|++|+++++++|++++.++-
T Consensus 336 vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~g~-~~lRl~Ppl~it~eeid~~l~~l~~~l~~~~ 405 (408)
T PRK04612 336 VRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQAGP-DVLRFVPALNLTDAELADGLARLRLALADYV 405 (408)
T ss_pred eeccceEEEEEecCchhhHHHHHHHHHHHCCeEEeeCCC-CEEEEcCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999831 256788899999999988765 8999999999999999999999999998764
No 21
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=1e-66 Score=527.88 Aligned_cols=393 Identities=27% Similarity=0.492 Sum_probs=337.1
Q ss_pred HHHHHHHHhccccccC-------CCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhccccc-
Q 012368 63 KEVMEAEKKLLVGTYN-------RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS- 134 (465)
Q Consensus 63 ~~~~~~~~~~~~~~~~-------~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~- 134 (465)
+.+++++.++.++++. ..|+++++++|+|+||.|||+||||++++++.++||+||+|.+|+.+|++++.+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~ 85 (460)
T PRK06105 6 NSLEARDIAYHLHPYTNARRHEEEGPLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHT 85 (460)
T ss_pred HHHHHhhhhhcccCCcccccccccCCceEEeeeEEEEEECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeec
Confidence 3345555555555444 24899999999999999999999999999999999999999999999999865432
Q ss_pred -CCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCcccccccc
Q 012368 135 -NMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALT 211 (465)
Q Consensus 135 -~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~ 211 (465)
..+.++...+++++|++..+ .++|+|++||+||++.|+|+++.++..++.. ++.+||.++.+|||++.++++++
T Consensus 86 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t---~r~~il~~~~~yHG~t~~a~s~t 162 (460)
T PRK06105 86 FSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRP---EKKKIISRQRGYHGVTIASASLT 162 (460)
T ss_pred ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC---CCcEEEEecCccCCcchhheecc
Confidence 23567778999999999885 5799999999999999999999886433221 47899999999999999998888
Q ss_pred CCCCcCCCCCCCCCCceEeeCCC------------------HHHHHhhcC---CCCeEEEEEcccCCCCCcccCCHHHHH
Q 012368 212 SKEHYRSPFEPVMPGVNFVEYGN------------------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQ 270 (465)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~l~---~~~~a~vi~ep~~~~~G~~~~~~~~l~ 270 (465)
+.+.++..+.+..+++..+|+++ ++++++++. .+++++||+||+++++|+++++++|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~ 242 (460)
T PRK06105 163 GLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWE 242 (460)
T ss_pred CCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHH
Confidence 76555555555555666555432 356777773 357999999999999999999999999
Q ss_pred HHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccCC-------CCc
Q 012368 271 FLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYG-------DHG 342 (465)
Q Consensus 271 ~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~-------~~~ 342 (465)
+|+++|++||++||+|||+|||||+|++|+++++++.|||+|+||+++|| +|+|++++++++++.+... .|+
T Consensus 243 ~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~ 322 (460)
T PRK06105 243 KIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHG 322 (460)
T ss_pred HHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeeeeecccccCcccceEEEEcHHHHHHHhcccccCcccccC
Confidence 99999999999999999999999999999999999999999999999998 6999999999999887531 378
Q ss_pred CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCC-------------
Q 012368 343 STFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS------------- 409 (465)
Q Consensus 343 ~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~------------- 409 (465)
+||++||++|++++++|++++++++++++++++++|++.|+++ .++|.+..++|.|+++++++..+
T Consensus 323 ~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~ 401 (460)
T PRK06105 323 FTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRAL-ADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKV 401 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh-hcCCCeEEEEecceEEEEEEecCcccCCCCCchhHH
Confidence 8999999999999999999998999999999999999999998 78999999999999999998210
Q ss_pred hHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 410 ATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 410 ~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
+..+...|+++||++.+.+ +++||+||+++|++||++++++|+++++++.
T Consensus 402 a~~i~~~~~~~Gvl~~~~g--~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (460)
T PRK06105 402 GARANAAAHEHGVISRAMG--DTLAFCPPLIITAAQVDEMVDRFGRALDDVA 451 (460)
T ss_pred HHHHHHHHHHCCeEEEecC--CEEEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 2457888899999998764 7899999999999999999999999998765
No 22
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-66 Score=521.72 Aligned_cols=379 Identities=35% Similarity=0.572 Sum_probs=335.2
Q ss_pred ccccCCC-ceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhccccc-CCCCCHHHHHHHHHHHh
Q 012368 74 VGTYNRA-PVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS-NMYYSIPQIELAKRLVA 151 (465)
Q Consensus 74 ~~~~~~~-p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~l~~ 151 (465)
.+.+.+. |+++++++|+|+||.|||+||||++++++.++||+||+|.+|+.++++++.+.. ..++++...+++++|++
T Consensus 15 ~~~~~~~~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~ 94 (425)
T PRK07495 15 SRGVGMTTQIYADRAENAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNA 94 (425)
T ss_pred ccccCcCCCeeEEeeeecEEEeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHH
Confidence 4445444 899999999999999999999999999999999999999999999999866543 24567778999999999
Q ss_pred hcC---CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC-CCcCCCCCCCCCCc
Q 012368 152 CSF---ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYRSPFEPVMPGV 227 (465)
Q Consensus 152 ~~~---~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~ 227 (465)
..+ .++|+|++||+||++.|+|+|+.+|+ +.+||.++++|||++.+++++++. ..+...+.+..+++
T Consensus 95 ~~p~~~~~~v~f~~SGseA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~ 165 (425)
T PRK07495 95 LVPGDFAKKTIFVTTGAEAVENAVKIARAATG---------RSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDV 165 (425)
T ss_pred hCCCCCCCEEEECCchHHHHHHHHHHHHHhhC---------CCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCe
Confidence 886 26999999999999999999999974 778999999999999988887664 33555566666777
Q ss_pred eEeeCCC----------HHHHHhhcC----CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 228 NFVEYGN----------IEATRKLIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 228 ~~~~~~d----------~~~le~~l~----~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
.++|+++ ++++++++. ++++++||+||+++++|+++++++|+++|+++|++||+++|+||||+|||
T Consensus 166 ~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~g 245 (425)
T PRK07495 166 YHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFA 245 (425)
T ss_pred EEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCC
Confidence 7788764 556677764 35799999999999999888999999999999999999999999999999
Q ss_pred CCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHH
Q 012368 294 RTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSK 373 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~ 373 (465)
|+|.+++++++++.||++||||++++|+|+|++++++++++.+.+..+.+||++||++++++.++|+.++++++.+++++
T Consensus 246 r~G~~~a~~~~gv~pDi~tlsK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~ 325 (425)
T PRK07495 246 RTGKLFAMEHHEVAADLTTMAKGLAGGFPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEEDLCERANQ 325 (425)
T ss_pred cCCCceeecccCCCCCEEeehhhhcCCccceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHH
Confidence 99998889999999999999999999999999999999999988777889999999999999999999988899999999
Q ss_pred HHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCC---------hHHHHHHHHHCCceEeecCC-CCEEEEecCCCCcH
Q 012368 374 KGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS---------ATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISE 443 (465)
Q Consensus 374 ~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~---------~~~~~~~l~~~Gv~v~~~~~-~~~lRi~~~~~~t~ 443 (465)
++++++++|+++.+.+|.+..+++.|+|+++++..+ ...+.+.|+++|+++.+.+. ++++||.||+++|+
T Consensus 326 ~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~~~~~~r~~Ppl~it~ 405 (425)
T PRK07495 326 LGNRLKQRLASLRETVPEIADIRGPGFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCGVHGNVIRFLAPITIQD 405 (425)
T ss_pred HHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEeCCCccCH
Confidence 999999999999888898889999999999998321 34577888999999977543 58999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 012368 444 QELDQAVEILCKTLPVLD 461 (465)
Q Consensus 444 e~i~~~l~~l~~~l~~~~ 461 (465)
+++++++++|++++++++
T Consensus 406 ~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 406 DVFAEALDILEASILEAS 423 (425)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999998875
No 23
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-66 Score=525.37 Aligned_cols=373 Identities=30% Similarity=0.501 Sum_probs=327.0
Q ss_pred CCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHhhcC--C
Q 012368 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF--A 155 (465)
Q Consensus 79 ~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~--~ 155 (465)
+.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++.+... ...++...+|+++|++..+ .
T Consensus 34 ~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 113 (457)
T PRK05639 34 LFPLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPIEN 113 (457)
T ss_pred CCCceEEeeecCEEEeCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCCCCc
Confidence 468999999999999999999999999999999999999999999999998654333 2345678899999999886 4
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC-CCcCCCCCCCCCCceEeeCCC
Q 012368 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYRSPFEPVMPGVNFVEYGN 234 (465)
Q Consensus 156 ~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d 234 (465)
++|+|++||+||++.|+|+|+.+|+ +.+||.++++|||++.+++++++. ..++..+.+..+++.++|+++
T Consensus 114 ~~v~f~~SGsEA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~ 184 (457)
T PRK05639 114 PKVLFGLSGSDAVDMAIKVSKFSTR---------RPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPN 184 (457)
T ss_pred CEEEEeCchHHHHHHHHHHHHHhcC---------CCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCc
Confidence 7999999999999999999999875 788999999999999998887653 233444556666777777653
Q ss_pred -------------H--------HHHHhhc-----CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecc
Q 012368 235 -------------I--------EATRKLI-----QPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEV 288 (465)
Q Consensus 235 -------------~--------~~le~~l-----~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 288 (465)
. +.+++.+ .++++++||+||+++++|+++|+++|+++|+++|++||++||+|||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv 264 (457)
T PRK05639 185 PYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEV 264 (457)
T ss_pred cccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEech
Confidence 2 2455554 2468999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHH
Q 012368 289 QCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFL 368 (465)
Q Consensus 289 ~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~ 368 (465)
++||||+|.+|+++++++.||++++||+++||+|+|++++++++++. ....+.+|+++||++++|++++|+.+++++++
T Consensus 265 ~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG~pi~av~~~~~i~~~-~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~l~ 343 (457)
T PRK05639 265 QTGIGRTGKWFASEWFEVKPDLIIFGKGVASGMGLSGVIGRKELMDL-TSGSALLTPAANPVISAAAEATLEIIEEENLL 343 (457)
T ss_pred hhccCcCchHHHHHhcCCCCCEEEechhhcCCCcceeEEehHHHHhh-cCCCcccCCCcCHHHHHHHHHHHHHHHHccHH
Confidence 99999999999999999999999999999999999999999999984 33456789999999999999999999889999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC--------ChHHHHHHHHHCCceEeecCC-CCEEEEecCC
Q 012368 369 ASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV--------SATPVVDACRDSGLLVLTAGK-GNVVRLVPPL 439 (465)
Q Consensus 369 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~--------~~~~~~~~l~~~Gv~v~~~~~-~~~lRi~~~~ 439 (465)
+++++++++|++.|+++..+++.+..++|.|+|+++++.. ....+.+.|+++|+++.+.+. ++++||.||+
T Consensus 344 ~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g~~~~~lr~~Ppl 423 (457)
T PRK05639 344 KNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSYGMFGNVIRITPPL 423 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCC
Confidence 9999999999999999988899999999999999999821 134678889999999987653 4799999999
Q ss_pred CCcHHHHHHHHHHHHHHHHHhh
Q 012368 440 IISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 440 ~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
++|++|+++++++|+++++++.
T Consensus 424 ~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 424 VITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred ccCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998764
No 24
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.1e-66 Score=527.23 Aligned_cols=374 Identities=32% Similarity=0.546 Sum_probs=329.7
Q ss_pred ceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHhhcC--CCe
Q 012368 81 PVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF--ADR 157 (465)
Q Consensus 81 p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~--~~~ 157 (465)
|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++.+... .+.++...+|+++|++..+ .++
T Consensus 30 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~ 109 (466)
T PRK07030 30 LIPIRRGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPGLSR 109 (466)
T ss_pred CceEEeeeccEEEECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCcCE
Confidence 4689999999999999999999999999999999999999999999998755433 4667889999999999875 679
Q ss_pred EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCC---
Q 012368 158 VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGN--- 234 (465)
Q Consensus 158 v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--- 234 (465)
|+|++||+||++.|+|+|+.|+..++.. ++.+||.+.++|||++.+++++++.+.++..+.|..+++.++|+++
T Consensus 110 v~f~~sGsEAve~AlKlAr~~~~~~g~t---~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~ 186 (466)
T PRK07030 110 CFYADNGSSAIEVALKMSFHYWRNRGKP---RKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYL 186 (466)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHHhCCC---CCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccc
Confidence 9999999999999999999986433221 4778999999999999999998877666655666556665555433
Q ss_pred --------------HHHHHhhcC--CCCeEEEEEcc-cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc
Q 012368 235 --------------IEATRKLIQ--PGKTAAVFVEP-IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY 297 (465)
Q Consensus 235 --------------~~~le~~l~--~~~~a~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~ 297 (465)
++++++++. ++++++||+|| +++++|+++++++|+++|+++|++||++||+|||+|||||+|.
T Consensus 187 ~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~ 266 (466)
T PRK07030 187 RPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGT 266 (466)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcccc
Confidence 566788885 46899999999 7999999999999999999999999999999999999999999
Q ss_pred cccccccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccC-------CCCcCCCCChHHHHHHHHHHHHHhcCchHHH
Q 012368 298 LWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY-------GDHGSTFAGSPLVCNAAIAVLDKISNPAFLA 369 (465)
Q Consensus 298 ~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~-------~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~ 369 (465)
+|+++++++.||++|+||+++|| +|+|++++++++++.+.. ..|++||++||++|+|+.++|++++++++.+
T Consensus 267 ~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~ 346 (466)
T PRK07030 267 MFACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIE 346 (466)
T ss_pred chHHHhcCCCCCEEeeehhccCCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 99999999999999999999999 599999999999987742 2588999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC--C-----------hHHHHHHHHHCCceEeecCCCCEEEEe
Q 012368 370 SVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV--S-----------ATPVVDACRDSGLLVLTAGKGNVVRLV 436 (465)
Q Consensus 370 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~--~-----------~~~~~~~l~~~Gv~v~~~~~~~~lRi~ 436 (465)
+++++++++++.|+++ .++|.+..+++.|+++++++.. . ..++.+.|+++||++.+.+ +.+||.
T Consensus 347 ~~~~~G~~l~~~L~~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g--~~i~~~ 423 (466)
T PRK07030 347 NNRALARRMAEATAHL-ADHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPLG--SVVYFL 423 (466)
T ss_pred HHHHHHHHHHHHHHHH-hcCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEecC--CEEEEE
Confidence 9999999999999987 4688889999999999999821 0 1357888999999998764 689999
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 437 PPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 437 ~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
||+++|++||++++++|+++++++
T Consensus 424 Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 424 PPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999887
No 25
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=1.7e-66 Score=525.21 Aligned_cols=377 Identities=31% Similarity=0.511 Sum_probs=323.7
Q ss_pred CceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC--CCCCHHHHHHHHHHHhhcC--C
Q 012368 80 APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN--MYYSIPQIELAKRLVACSF--A 155 (465)
Q Consensus 80 ~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~la~~l~~~~~--~ 155 (465)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++.+... .+.++...+|+++|++..+ .
T Consensus 32 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 111 (456)
T PRK07480 32 GSRVITRAEGVYLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGF 111 (456)
T ss_pred CCceEEeceeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCc
Confidence 47899999999999999999999999999999999999999999999998654322 3567889999999999885 6
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCC--
Q 012368 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG-- 233 (465)
Q Consensus 156 ~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 233 (465)
++|+|++||+||++.|+|+|+.|+..++.. ++.+||.++++|||++.+++++++...+...+.+..+++..++++
T Consensus 112 ~~v~f~~SGseA~e~AlklAr~~~~~~g~~---~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~ 188 (456)
T PRK07480 112 NHVFFTNSGSEANDTVLRMVRHYWALKGKP---QKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYW 188 (456)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCC---CCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcc
Confidence 799999999999999999999986433221 477899999999999999888876554333333333444444322
Q ss_pred -------------C--HHHHHhhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCC
Q 012368 234 -------------N--IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT 295 (465)
Q Consensus 234 -------------d--~~~le~~l~---~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~ 295 (465)
| ++++++.+. .+++++||+||+++++|+++++++|+++|+++|++||++||+|||+|||||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRt 268 (456)
T PRK07480 189 FGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRT 268 (456)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC
Confidence 1 266665552 3589999999999999999999999999999999999999999999999999
Q ss_pred CccccccccCCcccEEEecccCCCc-cceeeEEeCHHHHhhcc--C--CCCcCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 012368 296 GYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAIN--Y--GDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS 370 (465)
Q Consensus 296 g~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~--~--~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~ 370 (465)
|.+|+++++++.||++||||+++|| +|+|++++++++++.+. . ..+++||++||++|+|++++|++++++++.++
T Consensus 269 G~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~ 348 (456)
T PRK07480 269 GEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVER 348 (456)
T ss_pred cchhhhhhcCCCCCeeeeehhhccCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHH
Confidence 9999999999999999999999999 59999999999999872 2 25789999999999999999999988899999
Q ss_pred H-HHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCC-------------hHHHHHHHHHCCceEeecCCCCEEEEe
Q 012368 371 V-SKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS-------------ATPVVDACRDSGLLVLTAGKGNVVRLV 436 (465)
Q Consensus 371 ~-~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~-------------~~~~~~~l~~~Gv~v~~~~~~~~lRi~ 436 (465)
+ +++++++++.|+++ .++|.+..++|.|+|+++++..+ ...+...|+++||++.+.+ +.+||+
T Consensus 349 ~~~~~g~~l~~~l~~l-~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~--~~l~~~ 425 (456)
T PRK07480 349 VRDDTGPYLQKRLREL-ADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAVG--DRMIIS 425 (456)
T ss_pred HHHHHHHHHHHHHHHh-hcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeecC--CEEEEE
Confidence 9 69999999999995 67898999999999999999211 1356678899999998754 789999
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 437 PPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 437 ~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
|++++|++|||+++++|++++.++++
T Consensus 426 Ppl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 426 PPLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988754
No 26
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-67 Score=490.46 Aligned_cols=402 Identities=48% Similarity=0.804 Sum_probs=352.3
Q ss_pred hhhhccCCCCCCcchHHHHHHHHhccccccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHH
Q 012368 48 NDAARGSAGGLGRNNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQA 127 (465)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~ 127 (465)
..++...++++.+.++ .+.+|.+.|+++.+++|+++||.||++||||+++|++..+||++|+|.+|+.+++
T Consensus 15 ~~~~~~~~~i~~~~~~---------~~~t~a~~pv~~~~gkg~kl~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~ 85 (433)
T KOG1401|consen 15 NAASVSMPGIVEEKTR---------IVSTYARYPVVIESGKGSKLFDPDGKEYIDFTSSWAVTILGHANPEVARALAEQA 85 (433)
T ss_pred cchhhccccccccceE---------EeeecCCCceeeecceeeeeecCCcceeeeeccceeccccCCCCHHHHHHHHHHH
Confidence 3344455555544444 3446778999999999999999999999999999999999999999999999999
Q ss_pred hhcccccCCCCCHHHHHHHHHHHhhc---CCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCc
Q 012368 128 NVLTHVSNMYYSIPQIELAKRLVACS---FADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRT 204 (465)
Q Consensus 128 ~~~~~~~~~~~~~~~~~la~~l~~~~---~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~ 204 (465)
.++.|.++.+.+....++++.|.+.. ..++|+|+|||||||+.|+++||+++....+. .+.++|.|+++|||.+
T Consensus 86 ~k~~hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~---~~t~~Iaf~nsyHG~t 162 (433)
T KOG1401|consen 86 KKLGHSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPE---KKTKFIAFENSYHGRT 162 (433)
T ss_pred hhheeccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCc---cceeEEEEecCcCCcc
Confidence 99988878777777889999999888 48999999999999999999999998755543 2457999999999999
Q ss_pred cccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCC--CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCE
Q 012368 205 MGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP--GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGAL 282 (465)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~l 282 (465)
.++++.++...++.++.|..+++...++||..++++.++. +++++||+||++++||.++++++|+..|+++|+++|++
T Consensus 163 lgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl 242 (433)
T KOG1401|consen 163 LGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVL 242 (433)
T ss_pred hhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCce
Confidence 9999999999998888899999999999999999999983 36999999999999999999999999999999999999
Q ss_pred EEEeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCCC---cCCCCChHHHHHHHHHHH
Q 012368 283 LVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDH---GSTFAGSPLVCNAAIAVL 359 (465)
Q Consensus 283 lI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~---~~t~~~~~~~~~aa~a~L 359 (465)
||+|||++||||+|..|++++++++|||.|++|.|+||+|+|++++++++++.+.+..+ ++||++||++|.++..+|
T Consensus 243 ~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~aK~L~gGlPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l 322 (433)
T KOG1401|consen 243 LIFDEVQTGLGRLGYGWAQEYFGVTPDITTVAKPLGGGLPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVL 322 (433)
T ss_pred EEeehhhhCccccchHHHHHHhCcCCcceeehhhccCCceeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988755 999999999999999999
Q ss_pred HHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCcee-eeccceEEEEEecCChHHHHHHHHHCCceEeecCC---CCEEEE
Q 012368 360 DKISNPAFLASVSKKGHYFKETLKQKLARNPHVKD-VRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGK---GNVVRL 435 (465)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~---~~~lRi 435 (465)
+.+.+++.++++.+.++.|++.+.+.+.+.+.... ..++|+++++.+..+..++.+...+.|.++.+.+. ...+||
T Consensus 323 ~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~~gv~i 402 (433)
T KOG1401|consen 323 DELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLEEGVRI 402 (433)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeechhhhhhhhhhhhHHHHHHhcccccceEEE
Confidence 99999999999999999999999999888774333 37889999998866666666666666666655432 134777
Q ss_pred ec--CC--CCcHHHHHHHHHHHHHHHHHhh
Q 012368 436 VP--PL--IISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 436 ~~--~~--~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
.| .+ .+++|.++++++++.+.+.++.
T Consensus 403 ~P~~~l~~~~~~E~i~~~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 403 APIYLLTVEHTPEVIQRLLTILEKVLSALN 432 (433)
T ss_pred eccccccccCcHHHHHHHHHHHHHHHHHhc
Confidence 77 33 3458999999999999998765
No 27
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=3.1e-66 Score=518.74 Aligned_cols=381 Identities=43% Similarity=0.771 Sum_probs=341.2
Q ss_pred cccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC
Q 012368 75 GTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF 154 (465)
Q Consensus 75 ~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~ 154 (465)
+.|.+.|+++++++|+++||.||++||||.+++++.+|||+||+|.+|+.++++++.+....+.++...+|+++|++..+
T Consensus 12 ~~~~~~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~~ 91 (397)
T TIGR03246 12 PNYAPAPFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNEPVLRLAKKLVDATF 91 (397)
T ss_pred cccCCCCceEEEeecCEEEeCCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCC
Confidence 34557799999999999999999999999999999999999999999999999875443344567778999999999888
Q ss_pred CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCC
Q 012368 155 ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGN 234 (465)
Q Consensus 155 ~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 234 (465)
.++++|++||+|||+.|+++++.+|..++. +++++||.++.+|||++..++++++.+.+...+.+..+++..+|++|
T Consensus 92 ~~~~~f~~SGseA~e~Alk~ar~~~~~~~~---~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 168 (397)
T TIGR03246 92 ADKVFFCNSGAEANEAALKLARRYALDKHG---ADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYND 168 (397)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCC---CCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCC
Confidence 889999999999999999999998743211 14788999999999999988888876666666667777888899999
Q ss_pred HHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec
Q 012368 235 IEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA 314 (465)
Q Consensus 235 ~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s 314 (465)
++++++++.+ ++++||+||+++++|+++++++||++|+++|++||+++|+||||+||||+|.+++++++++.||++|+|
T Consensus 169 ~~~l~~~l~~-~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~t~~ 247 (397)
T TIGR03246 169 LAAAKALISD-KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTSA 247 (397)
T ss_pred HHHHHHHhcc-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEEEee
Confidence 9999999964 699999999999999999999999999999999999999999999999999988888999999999999
Q ss_pred ccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCcee
Q 012368 315 KPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKD 394 (465)
Q Consensus 315 K~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 394 (465)
|++++|+|+|++++++++++.+....+.+||++||++++++.++|+.++++++.++++++++++++.|+++..+++.+..
T Consensus 248 K~lggG~pigav~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~ 327 (397)
T TIGR03246 248 KALGGGFPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINARYNVFSE 327 (397)
T ss_pred hhhhCCcceeEEEEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhcCCCeEe
Confidence 99999999999999999999997667888999999999999999999877889999999999999999998777888888
Q ss_pred eeccceEEEEEecC----ChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 395 VRGLGLIIGIEFDV----SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 395 ~~~~g~~~~i~~~~----~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
+++.|.++.+++.. ....+++.|+++|+++.+.+. +++|++|++.+|+++|++++++|++++.++
T Consensus 328 vrg~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~-~~lR~~p~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 328 IRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALIAGP-NVVRFAPSLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred eecCceEEEEEEcCchhhHHHHHHHHHHHCCeEEeecCC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999998832 356788999999999987765 789999999999999999999999998754
No 28
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.5e-66 Score=526.76 Aligned_cols=378 Identities=33% Similarity=0.579 Sum_probs=330.9
Q ss_pred CCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHhhcC--C
Q 012368 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF--A 155 (465)
Q Consensus 79 ~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~--~ 155 (465)
+.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++.+... .+.++...+|+++|++..+ .
T Consensus 37 ~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~ 116 (460)
T PRK06916 37 EDPLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVVPEGL 116 (460)
T ss_pred CCCeeEEeccccEEEeCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCC
Confidence 358999999999999999999999999999999999999999999999998655433 4567888999999999886 5
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCC--
Q 012368 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG-- 233 (465)
Q Consensus 156 ~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 233 (465)
++++|+|||+||++.|+|+|+.++..++. +++.+||.++++|||.+.+++++++...++..+.|..+++..+|++
T Consensus 117 ~~v~f~~SGseAve~AlklAr~~~~~~g~---tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~ 193 (460)
T PRK06916 117 KKVFYSDSGATAVEIAIKMAFQYWQNKGK---PKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYT 193 (460)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCC---CCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcc
Confidence 79999999999999999999998643322 2478999999999999999999888766665666655555555442
Q ss_pred ---------------CHHHHHhhcC--CCCeEEEEEcc-cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCC
Q 012368 234 ---------------NIEATRKLIQ--PGKTAAVFVEP-IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT 295 (465)
Q Consensus 234 ---------------d~~~le~~l~--~~~~a~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~ 295 (465)
++++++++++ ++++++||+|| +++++|+++++++||++|+++|++||++||+|||+|||||+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRt 273 (460)
T PRK06916 194 YRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRT 273 (460)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcC
Confidence 2566777775 46899999999 69999999999999999999999999999999999999999
Q ss_pred CccccccccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccC-------CCCcCCCCChHHHHHHHHHHHHHhcCchH
Q 012368 296 GYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY-------GDHGSTFAGSPLVCNAAIAVLDKISNPAF 367 (465)
Q Consensus 296 g~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~-------~~~~~t~~~~~~~~~aa~a~L~~~~~~~~ 367 (465)
|.+|+++++++.||++|+||+++|| +|+|++++++++++.+.. ..+++||++||++|+|++++|+.++++++
T Consensus 274 G~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l 353 (460)
T PRK06916 274 GKMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKTNL 353 (460)
T ss_pred chhhHHHhcCCCCCeeeeehhhhcCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 9999999999999999999999999 599999999999987642 24788999999999999999999988899
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCC-------------hHHHHHHHHHCCceEeecCCCCEEE
Q 012368 368 LASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS-------------ATPVVDACRDSGLLVLTAGKGNVVR 434 (465)
Q Consensus 368 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~-------------~~~~~~~l~~~Gv~v~~~~~~~~lR 434 (465)
+++++++++++++.|+++. +++.+..++|.|+|+.+++..+ ...+...|+++||++.+.+ +++|
T Consensus 354 ~~~~~~~g~~l~~~l~~l~-~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g--~~l~ 430 (460)
T PRK06916 354 IEQVARKTEYVATQLEDLF-ALKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPLG--NTIV 430 (460)
T ss_pred HHHHHHHHHHHHHHHHHhh-cCCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEecC--CEEE
Confidence 9999999999999999985 4888889999999999998211 2467888999999998864 7899
Q ss_pred EecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 435 LVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 435 i~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
|.||+++|++||++++++|+++++++..
T Consensus 431 ~~Ppl~it~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06916 431 FMPPLASTIDELDEMLRILYKAISDVTE 458 (460)
T ss_pred EeCCcccCHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999987643
No 29
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=2.1e-66 Score=515.87 Aligned_cols=377 Identities=79% Similarity=1.262 Sum_probs=341.0
Q ss_pred EEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCC
Q 012368 84 LASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNT 163 (465)
Q Consensus 84 ~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~s 163 (465)
+++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+++++..+....+.++...+++++|++..+.++|+|++|
T Consensus 1 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~f~~s 80 (382)
T PLN00144 1 FVSGKGCKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVASSFADRVFFCNS 80 (382)
T ss_pred CeeeeccEEEeCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhcCCCCeEEEeCC
Confidence 46899999999999999999999999999999999999999999987655444567789999999999877889999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCC----CCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHH
Q 012368 164 GTEANEAAIKFARKFQRHSNPDSK----EPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATR 239 (465)
Q Consensus 164 G~eA~~~al~~a~~~t~~~~~~~~----~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 239 (465)
|+||++.|+|+|+.+++.++..+. ..+.+||.++++|||++.+++++++...++.++.+..+++.++|++|+++++
T Consensus 81 GseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 160 (382)
T PLN00144 81 GTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAAR 160 (382)
T ss_pred cHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHH
Confidence 999999999999999864332110 0157899999999999999999888776666677777888899999999999
Q ss_pred hhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCC
Q 012368 240 KLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAG 319 (465)
Q Consensus 240 ~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~ 319 (465)
+++..+++++||+||+++++|+++++++|+++|+++|++||++||+||||+||||+|.+++++++++.||++||||++++
T Consensus 161 ~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PDi~t~sK~l~~ 240 (382)
T PLN00144 161 KLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPDIMTLAKPLAG 240 (382)
T ss_pred HhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCCEEEecccccC
Confidence 99976689999999999999999999999999999999999999999999999999998888889999999999999999
Q ss_pred ccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccc
Q 012368 320 GLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLG 399 (465)
Q Consensus 320 G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g 399 (465)
|+|+|++++++++++.+....+.+||++||++++++.++|+.++++++.++++++++++++.|++++.++|.+..+++.|
T Consensus 241 G~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg~G 320 (382)
T PLN00144 241 GLPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRGVG 320 (382)
T ss_pred CcceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCCCceeeecCc
Confidence 99999999999999999877788999999999999999999998889999999999999999999988888888899999
Q ss_pred eEEEEEecCChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 400 LIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 400 ~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
+++|++++.....++..++++||++.+++.++.+||+|+++++++++++++++|++++.++
T Consensus 321 ~~~~l~l~~~~~~~~~~~~~~Gv~i~~~~~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 321 LLVGIQLDVPAGPLVDACRDSGLLVLTAGKGDVVRLVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred eEEEEEecCccHHHHHHHHHCCeEEeecCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 9999999656678999999999999987545899999999999999999999999999764
No 30
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-66 Score=521.45 Aligned_cols=390 Identities=29% Similarity=0.597 Sum_probs=336.8
Q ss_pred HHHHHHHHhcccccc--CCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCC
Q 012368 63 KEVMEAEKKLLVGTY--NRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYS 139 (465)
Q Consensus 63 ~~~~~~~~~~~~~~~--~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~ 139 (465)
+.+++...++..+.+ ...|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++.+... .+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~~~~ 84 (445)
T PRK08593 5 HQLIQEDEHYFAKSGRIKYYPLVIDHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYMYH 84 (445)
T ss_pred HHHHHHHHHhhccccccCCCCceEEeeeeCEEEeCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccccccCC
Confidence 344444545544444 3368999999999999999999999999999999999999999999999998765433 3567
Q ss_pred HHHHHHHHHHHhhcC-C--CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCC-C
Q 012368 140 IPQIELAKRLVACSF-A--DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE-H 215 (465)
Q Consensus 140 ~~~~~la~~l~~~~~-~--~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~-~ 215 (465)
+...+|+++|++..+ . ++|+|++||+||++.|+|+||.+|+ +.+||.++++|||++.+++++++.. .
T Consensus 85 ~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tg---------r~~ii~~~~~YHG~t~~als~s~~~~~ 155 (445)
T PRK08593 85 EPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTG---------RPYIISFTNAYHGSTYGSLSMSGISLN 155 (445)
T ss_pred HHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhC---------CCeEEEECCCcCCCcHHHHhhcCCCcc
Confidence 889999999999885 2 6999999999999999999999985 7889999999999999998887643 2
Q ss_pred cCCCCCCCCCCceEeeCCCH-----------------HHHHhhcC----CCCeEEEEEcccCCCCCcccCCHHHHHHHHH
Q 012368 216 YRSPFEPVMPGVNFVEYGNI-----------------EATRKLIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRD 274 (465)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~d~-----------------~~le~~l~----~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~ 274 (465)
++..+.+..+++.++|++|. +++++++. .+++++||+||+++++|+++++++|+++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~ 235 (445)
T PRK08593 156 MRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYK 235 (445)
T ss_pred cccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHH
Confidence 33445566667766665432 44555453 3579999999999999999999999999999
Q ss_pred HHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHH
Q 012368 275 ACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNA 354 (465)
Q Consensus 275 l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~a 354 (465)
+|++||++||+||||+||||+|.+++++++++.||++|+||++++|+|+|++++++++++.+....+..|+++||++++|
T Consensus 236 lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~gK~l~~G~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aa 315 (445)
T PRK08593 236 FCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMSFGKSLAGGMPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAA 315 (445)
T ss_pred HHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEeeecccccCCcccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999888899999999999999999999999999999999988766677899999999999
Q ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC----------ChHHHHHHHHHCCceE
Q 012368 355 AIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV----------SATPVVDACRDSGLLV 424 (465)
Q Consensus 355 a~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~----------~~~~~~~~l~~~Gv~v 424 (465)
++++|+.+++++++++++++++++++.|+++.+++|.+..++|.|+++++++.. ....+...|+++||++
T Consensus 316 a~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~ 395 (445)
T PRK08593 316 ALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVI 395 (445)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEE
Confidence 999999998889999999999999999999988899999999999999998831 1346788899999999
Q ss_pred eecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 425 LTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 425 ~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
.+.+. +.+||+|++++|++||++++++++++++++.+
T Consensus 396 ~~~~~-~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 396 IAVAG-NVLRFQPPLVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred eccCC-CEEEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 76543 78999999999999999999999999988754
No 31
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=5.7e-66 Score=522.71 Aligned_cols=376 Identities=30% Similarity=0.491 Sum_probs=325.3
Q ss_pred CceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-C-CCCHHHHHHHHHHHhhcC--C
Q 012368 80 APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-M-YYSIPQIELAKRLVACSF--A 155 (465)
Q Consensus 80 ~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~-~~~~~~~~la~~l~~~~~--~ 155 (465)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++.+... . +.++...+|+++|.+..+ .
T Consensus 33 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 112 (466)
T PRK07036 33 GSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDL 112 (466)
T ss_pred CCceEEeCceeEEEECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCCc
Confidence 48899999999999999999999999999999999999999999999998654322 2 567889999999999875 6
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCC-
Q 012368 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGN- 234 (465)
Q Consensus 156 ~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d- 234 (465)
++|+|++||+||++.|+|+|+.++..++.. ++.+||.++++|||++.+++++++.+.++..+.+..+++.++|+++
T Consensus 113 ~~v~f~~sGseAve~AlklAr~~~~~~g~t---~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~ 189 (466)
T PRK07036 113 NHVFLTTGGSTAVDSALRFVHYYFNVRGRP---AKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNP 189 (466)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHHhcCCC---CccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcc
Confidence 799999999999999999999987433321 4789999999999999998888876665555555555555544332
Q ss_pred ----------------HHHHHhhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCC
Q 012368 235 ----------------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT 295 (465)
Q Consensus 235 ----------------~~~le~~l~---~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~ 295 (465)
++.+++.+. ++++++||+||+++++|+++|+++|+++|+++|++||+++|+|||+|||||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRt 269 (466)
T PRK07036 190 YRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRL 269 (466)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcC
Confidence 234555553 4689999999999999999999999999999999999999999999999999
Q ss_pred Ccccccc-ccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccC-------CCCcCCCCChHHHHHHHHHHHHHhcCch
Q 012368 296 GYLWAHE-HYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY-------GDHGSTFAGSPLVCNAAIAVLDKISNPA 366 (465)
Q Consensus 296 g~~~~~~-~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~-------~~~~~t~~~~~~~~~aa~a~L~~~~~~~ 366 (465)
|.+|+.+ ++++.|||+|+||+++|| +|+|++++++++++.+.. ..+++||++||++|+|++++|+.+++++
T Consensus 270 G~~~~~~~~~gv~PDivt~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~ 349 (466)
T PRK07036 270 GHFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREG 349 (466)
T ss_pred chhhhhhhhcCCCCCEEEEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCC
Confidence 9988887 789999999999999999 599999999999998752 2467899999999999999999998889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCC-------------hHHHHHHHHHCCceEeecCCCCEE
Q 012368 367 FLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS-------------ATPVVDACRDSGLLVLTAGKGNVV 433 (465)
Q Consensus 367 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~-------------~~~~~~~l~~~Gv~v~~~~~~~~l 433 (465)
+++++++++++|++.|+++ .++|.+..++|.|+++++++..+ ...+...|+++||++.+.+ +.+
T Consensus 350 l~~~~~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~--~~~ 426 (466)
T PRK07036 350 LCEHVREVGPYFEERLASL-RELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLE--HLC 426 (466)
T ss_pred HHHHHHHHHHHHHHHHHHh-ccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeecC--CEE
Confidence 9999999999999999876 67898999999999999998210 2457788999999998764 679
Q ss_pred EEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 434 RLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 434 Ri~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
|++||+++|++||++++++|+++++++.
T Consensus 427 ~l~Ppl~it~~~id~~~~~l~~al~~~~ 454 (466)
T PRK07036 427 VLSPPLIITRAQIDEIVAILRAAIEETA 454 (466)
T ss_pred EEeCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998764
No 32
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=3.3e-66 Score=526.86 Aligned_cols=377 Identities=29% Similarity=0.543 Sum_probs=323.9
Q ss_pred CCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC--CCCCHHHHHHHHHHHhhcC--
Q 012368 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN--MYYSIPQIELAKRLVACSF-- 154 (465)
Q Consensus 79 ~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~la~~l~~~~~-- 154 (465)
+.|+++++++|+|+||.|||+||||.+++++.+|||+||+|++|+.++++++.+.+. .+.++...+|+++|.+.+.
T Consensus 70 ~~p~~i~~~~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~ 149 (504)
T PLN02760 70 LEPLVIEKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTAR 149 (504)
T ss_pred CCCceEEeeeeeEEEECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCC
Confidence 368999999999999999999999999999999999999999999999998654322 3467779999999998853
Q ss_pred -CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCC
Q 012368 155 -ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG 233 (465)
Q Consensus 155 -~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (465)
.++++|+|||+||++.|+|+|+.|+...+.. ++.+||.++.+|||++.+++++++.+.+...+.+..+.+.+++++
T Consensus 150 ~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~---~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p 226 (504)
T PLN02760 150 KMGKVFFTNSGSEANDTQVKLVWYYNNALGRP---NKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCP 226 (504)
T ss_pred CCCEEEEeCChHHHHHHHHHHHHHHHHhcCCC---CCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCC
Confidence 4689999999999999999999886433221 367899999999999999988887655444443333334333321
Q ss_pred ----------C--------HHHHHhhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 234 ----------N--------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 234 ----------d--------~~~le~~l~---~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
+ .++|++++. ++++++||+||+++++|+++|+++|+++|+++|++||++||+|||+|||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGf 306 (504)
T PLN02760 227 HYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAF 306 (504)
T ss_pred cccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCC
Confidence 1 245777663 3579999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccC-------CCCcCCCCChHHHHHHHHHHHHHhcC
Q 012368 293 GRTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY-------GDHGSTFAGSPLVCNAAIAVLDKISN 364 (465)
Q Consensus 293 gr~g~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~-------~~~~~t~~~~~~~~~aa~a~L~~~~~ 364 (465)
||+|.+|+++++++.|||+||||+++|| +|+|++++++++++.+.. ..|++||++||++|+|++++|+++++
T Consensus 307 GRtG~~~a~e~~gv~PDivtlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~ 386 (504)
T PLN02760 307 GRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKE 386 (504)
T ss_pred cccchhhHHHhcCCCCcEEEecccccCCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999 599999999999998853 25789999999999999999999988
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC--C-----------hHHHHHHHHHCCceEeecCCCC
Q 012368 365 PAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV--S-----------ATPVVDACRDSGLLVLTAGKGN 431 (465)
Q Consensus 365 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~--~-----------~~~~~~~l~~~Gv~v~~~~~~~ 431 (465)
+++.+++++++++|++.|+++ .+++.+..++|.|+|+++++.. . ...+.+.|+++||++.+.+ +
T Consensus 387 ~~l~~~~~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g--~ 463 (504)
T PLN02760 387 RNIPEHVNKIAPRFQDGIKAF-SGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAG--D 463 (504)
T ss_pred CCHHHHHHHHHHHHHHHHHHH-hcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEecC--C
Confidence 899999999999999999997 7788889999999999999821 1 3457788999999998764 6
Q ss_pred EEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 432 VVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 432 ~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
.+||+|++++|++||++++++++++++++.
T Consensus 464 ~lrl~Ppl~it~eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 464 NIMMSPPLIITPEEVDELISIYGKALKATE 493 (504)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999999998764
No 33
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=4.8e-66 Score=521.27 Aligned_cols=396 Identities=25% Similarity=0.380 Sum_probs=333.7
Q ss_pred hhccccccchhhhccCCCCCCcchHHHHHHHHhccccccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHH
Q 012368 39 AAASVNVEVNDAARGSAGGLGRNNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDAD 118 (465)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~ 118 (465)
...|.++ |++|++++|||++++.+.+. .+.+.|+++++++|+|+||+|||+||||.++++++++||+||+
T Consensus 50 ~~~S~~l-~~ra~~~~pgGv~~~~r~~~---------~~~~~p~~~~~a~G~~l~D~dG~~yiD~~~g~g~~~lGh~~p~ 119 (474)
T PLN02482 50 TTKSEEI-FKAAKELMPGGVNSPVRAFK---------SVGGQPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAIIGHADDE 119 (474)
T ss_pred ChHHHHH-HHHHHhhCCCCCCCcchhhc---------ccCCCCeeEEEeeeCEEEECCCCEEEEecccccccccCCCCHH
Confidence 5688888 99999999999998887542 2346799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC-CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEc
Q 012368 119 WIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFT 197 (465)
Q Consensus 119 v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~ 197 (465)
|.+|+.++++++.+ ...+++...+|+++|++..+ .++|+|+|||+||++.|+|+||.||+ |++||.++
T Consensus 120 v~~av~~ql~~~~~--~~~~~~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~tg---------r~~Ii~~~ 188 (474)
T PLN02482 120 VLAALAETMKKGTS--FGAPCLLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTG---------REKIIKFE 188 (474)
T ss_pred HHHHHHHHHhhCCC--CCCCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhcC---------CCEEEEEC
Confidence 99999999998654 34567778999999999886 89999999999999999999999985 88999999
Q ss_pred CCcccCccccccc--cCCCCcCCCCCC-----CCCCceEeeCCCHHHHHhhcC--CCCeEEEEEcccCCCCCcccCCHHH
Q 012368 198 NSFHGRTMGALAL--TSKEHYRSPFEP-----VMPGVNFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEF 268 (465)
Q Consensus 198 ~~yhg~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~~d~~~le~~l~--~~~~a~vi~ep~~~~~G~~~~~~~~ 268 (465)
++|||+++..... ++......+..+ ..+.+..+||||+++++++++ .+++++||+||+++++|+++|+++|
T Consensus 189 g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~f 268 (474)
T PLN02482 189 GCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEF 268 (474)
T ss_pred CccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHH
Confidence 9999998654332 211111111111 123456789999999999996 3579999999999999999999999
Q ss_pred HHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccC---CCCcCCC
Q 012368 269 LQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINY---GDHGSTF 345 (465)
Q Consensus 269 l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~---~~~~~t~ 345 (465)
|++|+++|++||++||+|||++|| |+|.+++++++++.||++||||+++||+|+|++++++++++.+.+ ..+++||
T Consensus 269 l~~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv~PDi~t~gK~lggG~Pigav~g~~ei~~~~~~~~~~~~~~T~ 347 (474)
T PLN02482 269 LEGLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGITPDLTTLGKVIGGGLPVGAYGGRREIMEMVAPAGPMYQAGTL 347 (474)
T ss_pred HHHHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCCCCCEEEecchhhCCCceEEEEEcHHHHHhhccCCCcccccCc
Confidence 999999999999999999999999 999888899999999999999999999999999999999998863 3478899
Q ss_pred CChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC------------C---h
Q 012368 346 AGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV------------S---A 410 (465)
Q Consensus 346 ~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~------------~---~ 410 (465)
++||++++|++++|+++++++++++++++++++++.|+++..+++....+.+.+.++.+++.. + .
T Consensus 348 ~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~ 427 (474)
T PLN02482 348 SGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKF 427 (474)
T ss_pred chhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHH
Confidence 999999999999999998889999999999999999999877754322222334466776621 1 2
Q ss_pred HHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 411 TPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 411 ~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
..+.+.|+++||++.+.+.+. + .|++.+|++|||++++++++++++
T Consensus 428 ~~~~~~l~~~Gv~~~~~~~~~--~-~psl~ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 428 ARFHRGMLEEGVYLAPSQFEA--G-FTSLAHTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred HHHHHHHHHCCeEEeccCCCC--C-cCCCCCCHHHHHHHHHHHHHHHHh
Confidence 357888999999998865421 2 489999999999999999999875
No 34
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=5.3e-66 Score=521.68 Aligned_cols=374 Identities=31% Similarity=0.530 Sum_probs=323.6
Q ss_pred CCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHhhcCC--
Q 012368 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSFA-- 155 (465)
Q Consensus 79 ~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~~-- 155 (465)
+.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|+++..+.+. .+.++...+|+++|++..+.
T Consensus 20 ~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 99 (442)
T TIGR00709 20 KLPTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRK 99 (442)
T ss_pred CCCceEEeccccEEEeCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcC
Confidence 468999999999999999999999999999999999999999999999987543322 35677889999999998752
Q ss_pred --Ce-EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC
Q 012368 156 --DR-VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY 232 (465)
Q Consensus 156 --~~-v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (465)
.+ ++++|||+||++.|+|+|+.||+ |.+||.++++|||++.+++++++...++..+.+..+++.++|+
T Consensus 100 ~~~~~~f~~~sGsEA~e~AlklAr~~tg---------r~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~ 170 (442)
T TIGR00709 100 MDYKLQFPGPSGADAVEAAIKLAKTYTG---------RTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPY 170 (442)
T ss_pred CCccEEEeCCCHHHHHHHHHHHHHHhcC---------CCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCC
Confidence 24 55679999999999999999974 7889999999999999999988755554445555566665555
Q ss_pred CCH-----------------HHHHhhcC-----CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc
Q 012368 233 GNI-----------------EATRKLIQ-----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC 290 (465)
Q Consensus 233 ~d~-----------------~~le~~l~-----~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~ 290 (465)
++. +.+++.+. .+++++||+||+++++|+++++++|+++|+++|++||++||+||||+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~t 250 (442)
T TIGR00709 171 PHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQA 250 (442)
T ss_pred CccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 431 22344442 25799999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 012368 291 GLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS 370 (465)
Q Consensus 291 g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~ 370 (465)
||||+|.+|+++++++.||++|+||++++|+|+|+++++++ ++.+....+.+||++||++|+|++++|+.++++++.++
T Consensus 251 GfGRtG~~~a~~~~gv~PDiv~~gK~l~~G~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~ 329 (442)
T TIGR00709 251 GFGRSGTMFAFEHAGIEPDFVVMSKAVGGGLPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQN 329 (442)
T ss_pred CCCCCCchhHHHHcCCCCcEEEEcccccCCcccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHH
Confidence 99999999999999999999999999999999999999988 56665556889999999999999999999988899999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCC----------------hHHHHHHHHHCCceEeecCC-CCEE
Q 012368 371 VSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS----------------ATPVVDACRDSGLLVLTAGK-GNVV 433 (465)
Q Consensus 371 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~----------------~~~~~~~l~~~Gv~v~~~~~-~~~l 433 (465)
++++++++++.|+++.+++|.+..++|.|+|+++++..+ ...+...|+++||++.+.+. ++++
T Consensus 330 ~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l 409 (442)
T TIGR00709 330 AQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVF 409 (442)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCCCCEE
Confidence 999999999999999888999999999999999998211 24577788899999987653 5899
Q ss_pred EEecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 434 RLVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 434 Ri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
||.||+++|++|++++++++++++.++.+
T Consensus 410 ~~~Ppl~it~~ei~~~~~~l~~~l~~~~~ 438 (442)
T TIGR00709 410 RLLCPITIDQEECEEGISRFKQAVEEALA 438 (442)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987644
No 35
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=1.8e-65 Score=518.78 Aligned_cols=377 Identities=27% Similarity=0.452 Sum_probs=323.1
Q ss_pred CceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC--CCCCHHHHHHHHHHHhhcC--C
Q 012368 80 APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN--MYYSIPQIELAKRLVACSF--A 155 (465)
Q Consensus 80 ~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~la~~l~~~~~--~ 155 (465)
.|+++++++|+|+||.|||+||||.+++++.+|||+||+|++|+.+|++++.+.+. .+.++...+|+++|++..+ .
T Consensus 36 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 115 (460)
T PRK12403 36 GPRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHY 115 (460)
T ss_pred CCceEEeceeeEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCc
Confidence 48999999999999999999999999999999999999999999999998665433 2456778999999999987 6
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCC-
Q 012368 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGN- 234 (465)
Q Consensus 156 ~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d- 234 (465)
++++|++||+|||+.|+|+++.|+..++.+ .+..|+.+..+|||++.+++++++...+.. +.+..+++..+|+++
T Consensus 116 ~~v~f~~SGseA~e~AiklAr~~~~~~g~~---~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~-~~~~~~~~~~~~~p~~ 191 (460)
T PRK12403 116 SHAIYTNSGSEANEVLIRTVRRYWQVLGKP---QKKIMIGRWNGYHGSTLAATALGGMKFMHE-MGGLIPDVAHIDEPYW 191 (460)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhhCCC---CCcEEEEECCCcCcccHhhhhcCCCccccc-cCCCCCCCEEeCCCcc
Confidence 899999999999999999999986432211 356788999999999999998887554432 234445555554321
Q ss_pred ----------------HHHHHhhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCC
Q 012368 235 ----------------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT 295 (465)
Q Consensus 235 ----------------~~~le~~l~---~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~ 295 (465)
++++++.+. .+++++||+||+++++|+++++++|+++|+++|++||++||+|||++||||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRt 271 (460)
T PRK12403 192 YANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRT 271 (460)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC
Confidence 355666552 3579999999999999999999999999999999999999999999999999
Q ss_pred CccccccccCCcccEEEecccCCCcc-ceeeEEeCHHHHhhccC----CCCcCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 012368 296 GYLWAHEHYGIFPDIMTLAKPLAGGL-PIGAALVTEKVASAINY----GDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS 370 (465)
Q Consensus 296 g~~~~~~~~~~~pdi~t~sK~lg~G~-~iG~v~~~~~i~~~~~~----~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~ 370 (465)
|.+|+++++++.|||+|+||+++||+ |+|++++++++++.+.. ..+++||++||++|+|++++|++++++++.++
T Consensus 272 G~~~a~e~~gv~PDiv~~gK~lggG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~ 351 (460)
T PRK12403 272 GEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTR 351 (460)
T ss_pred chhhhhhhcCCCCCeEEEcccccccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHH
Confidence 99999999999999999999999995 99999999999988743 13788999999999999999999988889999
Q ss_pred HH-HHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCC-------------hHHHHHHHHHCCceEeecCCCCEEEEe
Q 012368 371 VS-KKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS-------------ATPVVDACRDSGLLVLTAGKGNVVRLV 436 (465)
Q Consensus 371 ~~-~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~-------------~~~~~~~l~~~Gv~v~~~~~~~~lRi~ 436 (465)
++ ++++++++.|+++..+++.+..++|.|+|+++++..+ ...+...|+++|+++.+.+ +.+|++
T Consensus 352 ~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~--~~~~l~ 429 (460)
T PRK12403 352 VKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRSTL--GRMIMA 429 (460)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEecC--CEEEEE
Confidence 96 9999999999999889999999999999999998211 1234566789999998654 568999
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 437 PPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 437 ~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
||+++|++|+++++++|++++.++.+
T Consensus 430 Ppl~it~~eid~~~~~l~~al~~~~~ 455 (460)
T PRK12403 430 PALVAGRAEIDELVDKTRIAVDRTAR 455 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998754
No 36
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=3.5e-65 Score=512.57 Aligned_cols=382 Identities=43% Similarity=0.742 Sum_probs=342.2
Q ss_pred cCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCC
Q 012368 77 YNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFAD 156 (465)
Q Consensus 77 ~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~ 156 (465)
+.+.|+++++++|+|+||.||++||||.+++++++|||+||+|.+|+.+++.+..+....+.++...+|+++|++..+.+
T Consensus 18 ~~~~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~ 97 (406)
T PRK12381 18 YAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFAD 97 (406)
T ss_pred cCCCCceEEEeecCEEEeCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccCccCCHHHHHHHHHHHhhCCCC
Confidence 45678999999999999999999999999999999999999999999999987544444456777899999999988888
Q ss_pred eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHH
Q 012368 157 RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIE 236 (465)
Q Consensus 157 ~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 236 (465)
+|+|++||+||++.|+++++.++..++. +++.+|+.++++|||++.+++++++.+.+...+.+..+++..+|++|++
T Consensus 98 ~v~~~~sGseA~e~Alk~ar~~~~~~~~---~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 174 (406)
T PRK12381 98 RVFFCNSGAEANEAALKLARKYAHDRYG---SHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLN 174 (406)
T ss_pred eEEEcCCcHHHHHHHHHHHHHHHhhcCC---CCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHH
Confidence 9999999999999999999998742211 1478899999999999999888888776666677777778888999999
Q ss_pred HHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEeccc
Q 012368 237 ATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKP 316 (465)
Q Consensus 237 ~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~ 316 (465)
++++++.+ ++++|++||+++++|+++++++|+++|+++|++||++||+||||+||||+|.+++++.+++.||++||||+
T Consensus 175 ~l~~~l~~-~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~t~sK~ 253 (406)
T PRK12381 175 SASALIDD-QTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLTTAKA 253 (406)
T ss_pred HHHHhccC-CeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEEEehhh
Confidence 99999964 79999999999999999999999999999999999999999999999999988787888999999999999
Q ss_pred CCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeee
Q 012368 317 LAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVR 396 (465)
Q Consensus 317 lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 396 (465)
+++|+|+|++++++++++.+....+..||++||++++++.++|+.++++++.++++++++++++.|+++..+++.+..++
T Consensus 254 l~gG~~ig~~~~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vr 333 (406)
T PRK12381 254 LGGGFPIGAMLTTEKCASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINARYGLFSEIR 333 (406)
T ss_pred hhCCCceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEe
Confidence 99999999999999999999877788999999999999999999988788999999999999999999876777778899
Q ss_pred ccceEEEEEecC----ChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhhc
Q 012368 397 GLGLIIGIEFDV----SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDSN 463 (465)
Q Consensus 397 ~~g~~~~i~~~~----~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 463 (465)
+.|+++++++.. ....+.+.|+++||++.+.+. +.+||+|++.+|+++|++++++|+++++++.++
T Consensus 334 g~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g~-~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~~ 403 (406)
T PRK12381 334 GLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIAGP-NVVRFAPALNISEEEITTGLDRFARACERFVSR 403 (406)
T ss_pred cCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeCCC-CEEEEeCCccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999843 346788899999999987654 789999999999999999999999999988765
No 37
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=1.4e-65 Score=517.60 Aligned_cols=394 Identities=21% Similarity=0.277 Sum_probs=334.7
Q ss_pred hhccccccchhhhccCCCCCCc-chHHHHHHHHhccccccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCH
Q 012368 39 AAASVNVEVNDAARGSAGGLGR-NNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDA 117 (465)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p 117 (465)
...|.++ +++|++++|+|+.. ..+.+ ..+.|+++++++|+++||+|||+||||.+++++.+|||+||
T Consensus 27 ~~~S~~l-~~ra~~~~p~g~~~~~~~~~-----------~~~~p~~~~~a~G~~v~D~DG~~yiD~~~g~g~~~lGh~~p 94 (453)
T PRK07046 27 HPRSRAL-AARAAQHLLGGVPMHWMNDW-----------PTPFPLFVAEARGARFTDVDGHRYDDFCLGDTGAMFGHSPA 94 (453)
T ss_pred ChhhHHH-HHHHHhhCCCCccccccccc-----------CCCCCCeEEeeeeCEEEeCCCCEEEEecccccccccCCCCH
Confidence 3567788 99999999999832 22211 02579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEc
Q 012368 118 DWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFT 197 (465)
Q Consensus 118 ~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~ 197 (465)
+|.+|+.++++++.. ...+++...+++++|++..+.++|+|+|||+||++.|+|+||.||+ |++||.|+
T Consensus 95 ~i~~Av~~q~~~~~~--~~~~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~AlrlAR~~TG---------r~~ii~~~ 163 (453)
T PRK07046 95 PVARALAEQARRGLT--TMLPSEDAAWVGEELARRFGLPYWQVATTATDANRFVLRWARAVTG---------RPKILVFN 163 (453)
T ss_pred HHHHHHHHHHHhCCC--CCCCCHHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHHHhhC---------CCEEEEEC
Confidence 999999999998643 3456788999999999988889999999999999999999999985 88999999
Q ss_pred CCcccCccccccc--cCCCCcCCCCCC----CCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHH
Q 012368 198 NSFHGRTMGALAL--TSKEHYRSPFEP----VMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQF 271 (465)
Q Consensus 198 ~~yhg~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~ 271 (465)
++|||+++..+.. ++.......+.+ ....+..+||||++++++++..+++++||+||+++++|+++|+++||++
T Consensus 164 g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~ 243 (453)
T PRK07046 164 GCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFNDLAALEAALADGDVAAVLAEPAMTNIGMVLPEPGFHEA 243 (453)
T ss_pred CCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCCCHHHHHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHH
Confidence 9999998665542 222211111111 1234567899999999999976689999999999999999999999999
Q ss_pred HHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccC---------CCCc
Q 012368 272 LRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINY---------GDHG 342 (465)
Q Consensus 272 l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~---------~~~~ 342 (465)
|+++|++||++||+|||++ | |.|.+...+++++.||++|+||+++||+|+|++++++++++.+.+ ..++
T Consensus 244 lr~lc~~~g~llI~DEV~t-f-r~g~Gg~~~~~gv~PDi~t~gK~lggG~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~ 321 (453)
T PRK07046 244 LRELTRRYGTLLVIDETHT-I-SSGPGGYTRAHGLEPDFLVVGKPIAGGVPCAVYGFSAELAERAQAAKASAPPGHSGIG 321 (453)
T ss_pred HHHHHHHhCCEEEEEcccc-C-ccCCcchhHHhCCCccceeehhhhcCCCcceeeeehHHHHHHHhhccccCCCCCceeC
Confidence 9999999999999999999 5 456555677889999999999999999999999999999998852 1367
Q ss_pred CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC-------------C
Q 012368 343 STFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV-------------S 409 (465)
Q Consensus 343 ~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~-------------~ 409 (465)
+||++||++|+|++++|++++++++++++++++++|++.|+++..+++.+..+++.|+++.+.+.. +
T Consensus 322 ~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~ 401 (453)
T PRK07046 322 TTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALD 401 (453)
T ss_pred CCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccC
Confidence 899999999999999999998888999999999999999999988888888899999999888721 1
Q ss_pred ---hHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 410 ---ATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 410 ---~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
...+...|+++||++.+.+ +.++++|+ +|++||++++++++++++++.
T Consensus 402 ~~~~~~~~~~~~~~Gv~~~~~~--~~~~~~p~--~t~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 402 PELEAALHLYLLNRGVLITPFH--NMMLVCPA--TTAADVDRLVAAFDACLGELL 452 (453)
T ss_pred HHHHHHHHHHHHHCCCEEeccc--CcEEEeCC--CCHHHHHHHHHHHHHHHHHHh
Confidence 1346677889999998743 56788764 899999999999999998764
No 38
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=3.3e-65 Score=516.32 Aligned_cols=394 Identities=35% Similarity=0.576 Sum_probs=335.9
Q ss_pred HHHHHHhccccccCC-------CceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhccccc-CC
Q 012368 65 VMEAEKKLLVGTYNR-------APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS-NM 136 (465)
Q Consensus 65 ~~~~~~~~~~~~~~~-------~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~-~~ 136 (465)
+.+...++.+++|.. .|+++++++|+|+||.|||+||||.++++++++||+||+|.+|+.+|++++.+.. ..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~ 91 (460)
T PRK06541 12 LQALAKRHLWMHFTRHGAYIDAPVPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWS 91 (460)
T ss_pred HHHHhhcccccCccCccccccCCCceEEeCcccEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccccc
Confidence 344445666665443 2688999999999999999999999999999999999999999999999875442 24
Q ss_pred CCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCC
Q 012368 137 YYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE 214 (465)
Q Consensus 137 ~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~ 214 (465)
+.++...+++++|++..+ .++|+|++||+||++.|+|+|+.+++.++.+ ++.+||.++++|||++.+++++++.+
T Consensus 92 ~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~---~r~~ii~~~~~yHG~t~~a~s~~~~~ 168 (460)
T PRK06541 92 YAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKP---GKHKVISRAIAYHGTTQGALAITGLP 168 (460)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCC---CccEEEEEcCcccCcchhhhcCcCCh
Confidence 567889999999999875 6799999999999999999999986432221 37899999999999999999988766
Q ss_pred CcCCCCCCCCCCceEeeCCC------------------HHHHHhhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHH
Q 012368 215 HYRSPFEPVMPGVNFVEYGN------------------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLR 273 (465)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~d------------------~~~le~~l~---~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~ 273 (465)
.+...+.+..+++..+|+++ ++.++++++ ++++++||+||+++++|.++++++||++|+
T Consensus 169 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~ 248 (460)
T PRK06541 169 AFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVR 248 (460)
T ss_pred hhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHH
Confidence 65555666666666555332 367888875 357999999999999999999999999999
Q ss_pred HHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCcc-ceeeEEeCHHHHhhccCC----CCcCCCCCh
Q 012368 274 DACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGL-PIGAALVTEKVASAINYG----DHGSTFAGS 348 (465)
Q Consensus 274 ~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~-~iG~v~~~~~i~~~~~~~----~~~~t~~~~ 348 (465)
++|++||++||+||||+||||+|.+|+++++++.||++|+||++++|+ |+|++++++++++.+... .+++|+++|
T Consensus 249 ~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt~gK~l~~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gn 328 (460)
T PRK06541 249 EICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGH 328 (460)
T ss_pred HHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEEecccccCCccceeEEEEcHHHHHHhhcCCCccccCCCCCCC
Confidence 999999999999999999999999999999999999999999999996 999999999999887532 367899999
Q ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCC---------h-------HH
Q 012368 349 PLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS---------A-------TP 412 (465)
Q Consensus 349 ~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~---------~-------~~ 412 (465)
|+++++++++|+.++++++.+++++++++|++.|+++.. +|.+..+++.|+|+.+++..+ . ..
T Consensus 329 p~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~-~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~ 407 (460)
T PRK06541 329 PVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLD-LPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGF 407 (460)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHH
Confidence 999999999999998888999999999999999998754 888889999999999998211 0 24
Q ss_pred HHHHHHHCCceEeecCC-CCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 413 VVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 413 ~~~~l~~~Gv~v~~~~~-~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
+...|+++||++.+.+. .+.+||+|++.+|++||++++++|++++.++..
T Consensus 408 ~~~~l~~~Gi~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06541 408 LSPALFEAGLYCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLTEAWA 458 (460)
T ss_pred HHHHHHhCCeEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 66788999999987432 278999999999999999999999999987654
No 39
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=1.6e-65 Score=516.51 Aligned_cols=397 Identities=24% Similarity=0.361 Sum_probs=340.6
Q ss_pred chhccccccchhhhccCCCCCCcchHHHHHHHHhccccccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCH
Q 012368 38 VAAASVNVEVNDAARGSAGGLGRNNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDA 117 (465)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p 117 (465)
+...|.++ +++|.+++|+|++.+.+.+ .+..++.|+++++++|+|+||.|||+||||.+++++.++||+||
T Consensus 2 ~~~~s~~~-~~~a~~~~p~g~~~~~~~~--------~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p 72 (428)
T PRK12389 2 NFTKSEAL-HQEALEHIVGGVNSPSRSY--------KAVGGGAPVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGHAHP 72 (428)
T ss_pred CChhhHHH-HHHHHhhCCCCCCCccccc--------cccCCCCCeEEEeccCCEEEeCCCCEEEEccccccccccCCCCH
Confidence 34678888 9999999999998766532 11123578999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC-CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEE
Q 012368 118 DWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSF 196 (465)
Q Consensus 118 ~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~ 196 (465)
+|.+|+.+|++++.. ..+.++...+++++|.+..+ .++++|++||+||++.|+|+|+.||+ +.+||.+
T Consensus 73 ~v~~ai~~q~~~~~~--~~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tg---------r~~ii~~ 141 (428)
T PRK12389 73 HITKAITEAAENGVL--YGTPTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTG---------RTKIIKF 141 (428)
T ss_pred HHHHHHHHHHHhCCc--cCCCCHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHhhC---------CCEEEEE
Confidence 999999999987644 34567889999999999875 78999999999999999999999974 8899999
Q ss_pred cCCcccCccccccccCCCCcC------CCCC-CCCCCceEeeCCCHHHHHhhcC--CCCeEEEEEcccCCCCCcccCCHH
Q 012368 197 TNSFHGRTMGALALTSKEHYR------SPFE-PVMPGVNFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKE 267 (465)
Q Consensus 197 ~~~yhg~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~d~~~le~~l~--~~~~a~vi~ep~~~~~G~~~~~~~ 267 (465)
+.+|||++.++++.++...+. ..+. +..+++..+|++|+++++++++ .+++++||+||+++++|.++|+++
T Consensus 142 ~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~ 221 (428)
T PRK12389 142 AGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPG 221 (428)
T ss_pred CCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHH
Confidence 999999999988876532211 1111 2235677889999999999986 357999999999999999999999
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccC---CCCcCC
Q 012368 268 FLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINY---GDHGST 344 (465)
Q Consensus 268 ~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~---~~~~~t 344 (465)
|+++|+++|++||++||+|||++|| |+|.+++++++++.||++|+||+++||+|+|++++++++++.+.+ ..+++|
T Consensus 222 yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv~PDivt~gK~lggG~Pi~av~~~~~i~~~~~~~~~~~~~~T 300 (428)
T PRK12389 222 FLEAVNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGVEPDLTALGKIIGGGLPIGAYGGRKDIMEQVAPLGPAYQAGT 300 (428)
T ss_pred HHHHHHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCCCCCeeeechhhcCCCceeEEeEHHHHHhhhccCCCcccccC
Confidence 9999999999999999999999999 998877888899999999999999999999999999999998853 357889
Q ss_pred CCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceee-eccceEEEEEecC-C-------------
Q 012368 345 FAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDV-RGLGLIIGIEFDV-S------------- 409 (465)
Q Consensus 345 ~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~i~~~~-~------------- 409 (465)
|++||++|+|++++|+++++++++++++++++++++.|+++.+++|.+..+ ++.| ++.+++.. .
T Consensus 301 ~~gnpl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi~~~~~~~~~~~~~~~~~~~ 379 (428)
T PRK12389 301 MAGNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-ALTVYFTDEKVTNYDQAERSDGE 379 (428)
T ss_pred CccCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EEEEEEeCCCCCChhhhcccCHH
Confidence 999999999999999999888999999999999999999988888876666 6666 77787721 1
Q ss_pred -hHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 410 -ATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 410 -~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
...+.+.|+++||++.+.+. +. +.|++.+|++||+++++++++++++
T Consensus 380 ~~~~~~~~l~~~Gv~~~~~~~-~~--~~~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 380 AFGKFFKLMLNQGINLAPSKY-EA--WFLTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred HHHHHHHHHHHCCcEeecCCC-CC--eeecCCCCHHHHHHHHHHHHHHHHh
Confidence 24678889999999987653 22 4579999999999999999999875
No 40
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=3.9e-65 Score=499.71 Aligned_cols=359 Identities=40% Similarity=0.690 Sum_probs=324.3
Q ss_pred CCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCe
Q 012368 78 NRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADR 157 (465)
Q Consensus 78 ~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~ 157 (465)
...|+.+++++|+|+||.|||+||||.+++++.++||+||+|++|+.+|+++..+....+.++...+++++|++..+.++
T Consensus 4 ~~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~~~~~ 83 (364)
T PRK04013 4 YRKRLRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWVNYEY 83 (364)
T ss_pred cCCCccEEEeecCEEEECCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhcCCCE
Confidence 35688999999999999999999999999999999999999999999999986655445678889999999999888889
Q ss_pred EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHH
Q 012368 158 VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEA 237 (465)
Q Consensus 158 v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 237 (465)
++|++||+||++.|+|+++.+++ +++||.++.+|||++.+++++++.+.++..+.|..+++..+|++|+++
T Consensus 84 v~~~~SGseA~e~Alklar~~~g---------r~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~~~ 154 (364)
T PRK04013 84 VYMGNSGTEAVEAALKFARLYTG---------RKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEA 154 (364)
T ss_pred EEEeCchHHHHHHHHHHHHHHhC---------CCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCCHHH
Confidence 99999999999999999999874 789999999999999999998887777667777778888899999999
Q ss_pred HHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccC
Q 012368 238 TRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPL 317 (465)
Q Consensus 238 le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~l 317 (465)
+++.+. +++++||+||+++++|..+++++|+++|+++|++||++||+|||++|| |+|.+|+++++++.||++|+||++
T Consensus 155 l~~~i~-~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PDiv~~gK~l 232 (364)
T PRK04013 155 AKEAIT-KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIVTMGKGI 232 (364)
T ss_pred HHHHhc-CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCCEEEecccc
Confidence 999996 479999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred CCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeec
Q 012368 318 AGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRG 397 (465)
Q Consensus 318 g~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 397 (465)
+||+|+|+++.++++ .+..+++||++||++|+|+.++|+.++++++.+++++. |.++ ..+.+..++|
T Consensus 233 ggG~P~~a~~~~~~~----~~~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~-------l~~l--~~~~v~~vRG 299 (364)
T PRK04013 233 GNGVPVSLTLTNFDV----ERGKHGSTFGGNPLACKAVAVTLRILRRERLVEKAGEK-------FIEI--KGERVVTTRG 299 (364)
T ss_pred cCCceeEEEEecccc----cCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH-------HHHh--ccCcceeeee
Confidence 999999999998776 23468899999999999999999999999998888774 2233 2267889999
Q ss_pred cceEEEEEecCChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 398 LGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 398 ~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
.|+|+++++..+...+.+.|+++|+++.+.+. +++||.||+++|++|+++++++|+++++++.
T Consensus 300 ~Gl~~gve~~~~~~~i~~~~~~~Gll~~~~g~-~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 300 RGLMIGIVLKKPVGKYVEELQNRGYLVHTAGQ-RVIRLLPPLIISKDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred CcEEEEEEeCCcHHHHHHHHHhCCcEEeeCCC-CEEEEeCCcccCHHHHHHHHHHHHHHHHHHh
Confidence 99999999965567889999999999988764 8999999999999999999999999998753
No 41
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=5e-65 Score=513.79 Aligned_cols=381 Identities=34% Similarity=0.556 Sum_probs=326.0
Q ss_pred CCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHhhcC--C
Q 012368 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF--A 155 (465)
Q Consensus 79 ~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~--~ 155 (465)
+.| ++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++.+... .+.++...+|+++|++..+ .
T Consensus 13 ~~p-~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 91 (447)
T PRK06917 13 PYP-VISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDL 91 (447)
T ss_pred CCC-eEEeeeeeEEEeCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCC
Confidence 446 58999999999999999999999999999999999999999999998644322 3567888999999999886 5
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEee----
Q 012368 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVE---- 231 (465)
Q Consensus 156 ~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 231 (465)
++++|++||+||++.|+|+|+.++..++.. +|.+||.++++|||++.+++++++...+...+.+..+++..+|
T Consensus 92 ~~v~f~~sGsEAve~AlklAr~~~~~rg~t---~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~ 168 (447)
T PRK06917 92 NWSFFVNSGSEANETAMKIAIQHFQERGIQ---GKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYC 168 (447)
T ss_pred CEEEEeCChHHHHHHHHHHHHHHHHhcCCC---CCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcc
Confidence 799999999999999999999886433322 4789999999999999999988765544444444333332222
Q ss_pred -------------CCCHHHHHhhcC---CCCeEEEEEcccCCC-CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCC
Q 012368 232 -------------YGNIEATRKLIQ---PGKTAAVFVEPIQGE-GGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGR 294 (465)
Q Consensus 232 -------------~~d~~~le~~l~---~~~~a~vi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr 294 (465)
+++++.++++++ .+++++||+||++++ +|+++++++|+++|+++|++||++||+|||++||||
T Consensus 169 ~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGR 248 (447)
T PRK06917 169 YRCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGR 248 (447)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCc
Confidence 123567788775 247999999999985 678899999999999999999999999999999999
Q ss_pred CCccccccccCCcccEEEecccCCCcc-ceeeEEeCHHHHhhccCC----CCcCCCCChHHHHHHHHHHHHHhcCchHHH
Q 012368 295 TGYLWAHEHYGIFPDIMTLAKPLAGGL-PIGAALVTEKVASAINYG----DHGSTFAGSPLVCNAAIAVLDKISNPAFLA 369 (465)
Q Consensus 295 ~g~~~~~~~~~~~pdi~t~sK~lg~G~-~iG~v~~~~~i~~~~~~~----~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~ 369 (465)
+|.+|+++++++.||++|+||+++||+ |+|++++++++++.+.+. .+++||++||++++|++++|+.++++++++
T Consensus 249 tG~~~a~~~~gv~PDi~~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~ 328 (447)
T PRK06917 249 TGAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPE 328 (447)
T ss_pred ccchhhHHhcCCCCCEEEeeehhccCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHH
Confidence 999999999999999999999999995 999999999999988542 367899999999999999999998889999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC-------------ChHHHHHHHHHCCceEeecC------CC
Q 012368 370 SVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV-------------SATPVVDACRDSGLLVLTAG------KG 430 (465)
Q Consensus 370 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~-------------~~~~~~~~l~~~Gv~v~~~~------~~ 430 (465)
++++++++|++.|+++..++|.+..++|.|+|+.+++.. ....+...|+++||++.+.+ .+
T Consensus 329 ~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~ 408 (447)
T PRK06917 329 KAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEG 408 (447)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCC
Confidence 999999999999999988899999999999999999821 13457788999999998753 14
Q ss_pred CEEEEecCCCCcHHHHHHHHHHHHHHHHHhhhc
Q 012368 431 NVVRLVPPLIISEQELDQAVEILCKTLPVLDSN 463 (465)
Q Consensus 431 ~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 463 (465)
+.+|++||+++|++||++++++|+++++++.++
T Consensus 409 ~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~~ 441 (447)
T PRK06917 409 DAVIIAPPMTITYSELDELLSIFAKSVEEMMQK 441 (447)
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 799999999999999999999999999887654
No 42
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=8.1e-65 Score=513.38 Aligned_cols=372 Identities=32% Similarity=0.561 Sum_probs=325.9
Q ss_pred CCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CC
Q 012368 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--AD 156 (465)
Q Consensus 79 ~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~ 156 (465)
+.|+++++++|+++||.|||+||||+++ ++.++||+||+|++|+.+|++++.+....+.++...+|+++|++..+ .+
T Consensus 53 ~~~~~i~~a~G~~l~D~dG~~ylD~~g~-~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 131 (459)
T PRK06082 53 PCLDVLASAEGIYIEDVDGKKYMDFHGN-NVHQLGYGHPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGELN 131 (459)
T ss_pred CCCceEEeeeeeEEEECCCCEEEEcccH-hhcccCCCCHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCCCC
Confidence 3478999999999999999999999855 78899999999999999999987654445678889999999999986 57
Q ss_pred eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEee-----
Q 012368 157 RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVE----- 231 (465)
Q Consensus 157 ~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 231 (465)
+++|++||+||++.|+|+|+.+++ +.+||.++++|||++.+++++++...++..+.+..+++..+|
T Consensus 132 ~v~f~~sGseAve~AlklAr~~tg---------r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (459)
T PRK06082 132 RVLFAPGGTSAIGMALKLARHITG---------NFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSY 202 (459)
T ss_pred EEEECCCcHHHHHHHHHHHHHhcC---------CCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCccc
Confidence 999999999999999999999974 789999999999999999888877666655666666665554
Q ss_pred ---CCC--------HHHHHhhcC-CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccc
Q 012368 232 ---YGN--------IEATRKLIQ-PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW 299 (465)
Q Consensus 232 ---~~d--------~~~le~~l~-~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~ 299 (465)
+++ +++++++++ .+++++||+||+++++ .++++++|+++|+++|++||++||+|||++||||+|.+|
T Consensus 203 ~~~~~~~~~~~~~~~~~l~~~i~~~~~vAavIvEPv~g~g-~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~f 281 (459)
T PRK06082 203 RGAFPDADGSDVHYADYLEYVIEKEGGIGAFIAEAVRNTD-VQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWF 281 (459)
T ss_pred ccccCChhHHHHHHHHHHHHHHhcCCCEEEEEECCccCCC-CcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh
Confidence 333 355788886 3479999999999885 667899999999999999999999999999999999999
Q ss_pred cccccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccCC-CCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 012368 300 AHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYG-DHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHY 377 (465)
Q Consensus 300 ~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~-~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~ 377 (465)
+++++++.||++|+||+++|| +|+|++++++++++.+... .+ +||++||++++|++++|++++++++.+++++++++
T Consensus 282 a~e~~gv~PDiv~~gKgl~gG~~P~~av~~~~~i~~~~~~~~~~-~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~ 360 (459)
T PRK06082 282 THQAYGIEPDILCIGKGLGGGLVPIAAMITKDKYNTAAQISLGH-YTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQF 360 (459)
T ss_pred HhHhhCCCCCEEEecccccCCCCcceEEEEcHHHHhhccCCCCC-CCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 999999999999999999999 5999999999988665322 34 79999999999999999999888999999999999
Q ss_pred HHHHHHHHHHcCCCceeeeccceEEEEEecCC----------hHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHH
Q 012368 378 FKETLKQKLARNPHVKDVRGLGLIIGIEFDVS----------ATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELD 447 (465)
Q Consensus 378 l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~----------~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~ 447 (465)
|++.|+++..++|.+..++|.|+|+++++..+ ...+...|+++||++.+.+. +++||+||+++|++||+
T Consensus 361 l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~-~~i~~~Ppl~it~~eid 439 (459)
T PRK06082 361 MRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVSQG-NVIQLSPPLIITREELT 439 (459)
T ss_pred HHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEecCC-CEEEEeCCCccCHHHHH
Confidence 99999999888999999999999999999311 34577888999999988643 89999999999999999
Q ss_pred HHHHHHHHHHHHhhhc
Q 012368 448 QAVEILCKTLPVLDSN 463 (465)
Q Consensus 448 ~~l~~l~~~l~~~~~~ 463 (465)
++++++++++.++.++
T Consensus 440 ~~~~~l~~~l~~~~~~ 455 (459)
T PRK06082 440 QALAILEEAIAKICQD 455 (459)
T ss_pred HHHHHHHHHHHHHhhh
Confidence 9999999999887654
No 43
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=6.7e-65 Score=509.70 Aligned_cols=374 Identities=29% Similarity=0.475 Sum_probs=325.6
Q ss_pred eEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHhhcC--CCeE
Q 012368 82 VVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF--ADRV 158 (465)
Q Consensus 82 ~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~--~~~v 158 (465)
+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++.+... .+.++...+|+++|++..+ .++|
T Consensus 28 ~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v 107 (429)
T PRK06173 28 YPVERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPSLNKI 107 (429)
T ss_pred ceEEeceeeEEEcCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCcCEE
Confidence 468999999999999999999999999999999999999999999998765433 3567889999999999875 6899
Q ss_pred EecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC-CCcCCCCCCCCCCceEeeCC----
Q 012368 159 FFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYRSPFEPVMPGVNFVEYG---- 233 (465)
Q Consensus 159 ~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---- 233 (465)
+|++||+||++.|+|+|+.|+..++.+ ++.+||.+.++|||.+.+++++++. ..++..+.+..+.+.++|++
T Consensus 108 ~f~~sGseAve~AlklAr~~~~~~g~~---~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 184 (429)
T PRK06173 108 FFADSGSVAVEVAMKMALQYQQAKGEV---QRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKF 184 (429)
T ss_pred EEeCCchHHHHHHHHHHHHHHHHhCCC---CCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCccc
Confidence 999999999999999999997543322 4788999999999999988887653 33444444444555555543
Q ss_pred -------CHHHHHhhcC--CCCeEEEEEccc-CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccc
Q 012368 234 -------NIEATRKLIQ--PGKTAAVFVEPI-QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEH 303 (465)
Q Consensus 234 -------d~~~le~~l~--~~~~a~vi~ep~-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~ 303 (465)
++++|++++. ++++++||+||+ ++++|.++++++|+++|+++|++||++||+|||++||||+|.+|++++
T Consensus 185 ~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~ 264 (429)
T PRK06173 185 GEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEH 264 (429)
T ss_pred chhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHh
Confidence 3667788885 458999999997 999999999999999999999999999999999999999999999999
Q ss_pred cCCcccEEEecccCCCc-cceeeEEeCHHHHhhccC-----CCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 012368 304 YGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY-----GDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHY 377 (465)
Q Consensus 304 ~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~-----~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~ 377 (465)
+++.|||+||||+++|| +|++++++++++++.+.+ ..+++||++||++|+|++++|+.++++++.+++++++++
T Consensus 265 ~gv~PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~~~~~~~~~g~~ 344 (429)
T PRK06173 265 AGVVPDIMCIGKALTGGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQRIEAQ 344 (429)
T ss_pred cCCCCCEEEeehhhhCCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999999999999999 599999999999998753 247789999999999999999999888899999999999
Q ss_pred HHHHHHHHHHcCCCceeeeccceEEEEEecC--ChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHH
Q 012368 378 FKETLKQKLARNPHVKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCK 455 (465)
Q Consensus 378 l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~ 455 (465)
|++.|+++ .+++.+..+++.|+++.+++.. ....+.+.|+++||++.+.+ +++||.||+++|++|+++++++|++
T Consensus 345 l~~~L~~~-~~~~~v~~vRg~Gl~~~iel~~~~~~~~i~~~l~e~Gi~v~~~g--~~l~~~Ppl~it~~ei~~~~~~l~~ 421 (429)
T PRK06173 345 LKQELAPA-AEFDSVAEVRVLGAIGVVEMKEPVNMATLQPRFVEHGIWVRPFG--KLVYIMPPFIISPDELSQLTSGLLR 421 (429)
T ss_pred HHHHHHHh-hcCCCeeeeeccceEEEEEeCCcccHHHHHHHHHHCCeEEEecC--CEEEEeCCccCCHHHHHHHHHHHHH
Confidence 99999875 5677778899999999999942 35678999999999998865 7999999999999999999999999
Q ss_pred HHHHhh
Q 012368 456 TLPVLD 461 (465)
Q Consensus 456 ~l~~~~ 461 (465)
++.++.
T Consensus 422 ~l~~~~ 427 (429)
T PRK06173 422 VLKQEY 427 (429)
T ss_pred HHHHHh
Confidence 998754
No 44
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=9.5e-65 Score=511.05 Aligned_cols=377 Identities=33% Similarity=0.587 Sum_probs=327.9
Q ss_pred CCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHhhcC--
Q 012368 78 NRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF-- 154 (465)
Q Consensus 78 ~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~-- 154 (465)
.+.|+++++++|+|+||.||++||||.+++++.++||+||+|.+|+.+|++++.+... .+.++...+++++|++..+
T Consensus 26 ~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~ 105 (442)
T PRK13360 26 KKAPRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGG 105 (442)
T ss_pred cCCCceEEeeeeeEEEeCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCC
Confidence 3568999999999999999999999999999999999999999999999998655433 3567778999999999875
Q ss_pred CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCC
Q 012368 155 ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGN 234 (465)
Q Consensus 155 ~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 234 (465)
.++|+|++||+||++.|+|+|+.|++.++.. ++.+||.+.++|||++.+++++++...++..+.+..+++.++|+..
T Consensus 106 ~~~v~f~~sGseA~e~AlklAr~~~~~~g~~---~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~ 182 (442)
T PRK13360 106 LNHVFFTNSGSESVDTALKIALAYHRARGEG---SRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTL 182 (442)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC---CCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCc
Confidence 6799999999999999999999987433211 3678999999999999999988876666555555556666555541
Q ss_pred ------------------HHHHHhhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 235 ------------------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 235 ------------------~~~le~~l~---~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
+++|++++. .+++++||+||+++++|+++++++|+++|+++|++||++||+|||++|||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~G 262 (442)
T PRK13360 183 DLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFG 262 (442)
T ss_pred hhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence 457888885 35799999999999999999999999999999999999999999999999
Q ss_pred CCCccccccccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccCC-------CCcCCCCChHHHHHHHHHHHHHhcCc
Q 012368 294 RTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYG-------DHGSTFAGSPLVCNAAIAVLDKISNP 365 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~-------~~~~t~~~~~~~~~aa~a~L~~~~~~ 365 (465)
|+|.+++++++++.||++|+||+++|| +|+|++++++++++.+... .+++||++||++++++.++|++++++
T Consensus 263 rtG~~~a~~~~gv~PDivt~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~ 342 (442)
T PRK13360 263 RLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYERE 342 (442)
T ss_pred CCccchhhhhcCCCCceeeeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999988 8999999999999887532 36789999999999999999999888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEec-C------ChHHHHHHHHHCCceEeecCCCCEEEEecC
Q 012368 366 AFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFD-V------SATPVVDACRDSGLLVLTAGKGNVVRLVPP 438 (465)
Q Consensus 366 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~-~------~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~ 438 (465)
++.++++++++++++.|+++ .+++.+..++|.|+++.+++. . .+.++...|+++||++.+.+ +.+||+|+
T Consensus 343 ~l~~~~~~~g~~l~~~l~~l-~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~~--~~lr~~Pp 419 (442)
T PRK13360 343 GLLTRAARLAPYWEDALHSL-RDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYTG--DILALSPP 419 (442)
T ss_pred CHHHHHHHHHHHHHHHHHHh-hcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEecC--CEEEEeCC
Confidence 89999999999999999886 457778899999999988882 1 13467888999999998764 68999999
Q ss_pred CCCcHHHHHHHHHHHHHHHHHh
Q 012368 439 LIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 439 ~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
+++|++|||+++++|+++++++
T Consensus 420 l~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 420 LIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred CccCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999764
No 45
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=9.8e-65 Score=505.22 Aligned_cols=376 Identities=41% Similarity=0.685 Sum_probs=331.2
Q ss_pred cCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCC
Q 012368 77 YNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFAD 156 (465)
Q Consensus 77 ~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~ 156 (465)
+.+.|+++++++|+++||.||++||||++++++.++||+||+|.+|+.+++++..+....+.+++..+|+++|.+..+.+
T Consensus 15 ~~~~~~~~~~~~G~~~~d~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~~~ 94 (395)
T PRK03715 15 TNRPDIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSPAFYNEPMAKLAGLLTQHSCFD 94 (395)
T ss_pred cCCCCceEEeeecCEEEECCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHhhccCCC
Confidence 34568899999999999999999999999999999999999999999999988665544456778899999999876678
Q ss_pred eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHH
Q 012368 157 RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIE 236 (465)
Q Consensus 157 ~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 236 (465)
+++|++||+||++.|+++++.+++... +++++||.++++|||++.+++++++...+...+.|..+++...+++|++
T Consensus 95 ~v~f~~SGseA~e~Aik~ar~~~~~~~----~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~ 170 (395)
T PRK03715 95 KVFFANSGAEANEGAIKLARKWGRKHK----NGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIA 170 (395)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhccC----CCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHH
Confidence 999999999999999999998864211 1467899999999999999999887766665666666677777889999
Q ss_pred HHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEeccc
Q 012368 237 ATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKP 316 (465)
Q Consensus 237 ~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~ 316 (465)
++++++.+ ++++||+||+++++|.++++++|+++|+++|++||++||+||||+||||+|.+|+++++++.||++|+||+
T Consensus 171 ~l~~~l~~-~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~gK~ 249 (395)
T PRK03715 171 SVEKLITD-KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLGKG 249 (395)
T ss_pred HHHHHcCC-CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeeehhh
Confidence 99999964 68999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeee
Q 012368 317 LAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVR 396 (465)
Q Consensus 317 lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 396 (465)
+++|+|+|+++++++++. +.+..+++||++||+++++++++|+++++++++++++++++++++.|+++..+++ +..++
T Consensus 250 lg~G~p~~av~~~~~i~~-~~~~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-i~~vr 327 (395)
T PRK03715 250 IGGGVPLAALLAKAEVAV-FEAGDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSEERG-LEGER 327 (395)
T ss_pred hhCCcceEEEEEcccccc-ccCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcCC-cCeEE
Confidence 999999999999999863 4445678999999999999999999998889999999999999999999877776 56789
Q ss_pred ccceEEEEEecCC-hHHHHHHHHHC---CceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 397 GLGLIIGIEFDVS-ATPVVDACRDS---GLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 397 ~~g~~~~i~~~~~-~~~~~~~l~~~---Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
|.|+++.+++..+ ...+.+.+.+. ||++.+... +.+||+|++.+|++||++++++|+++++++
T Consensus 328 G~Glm~~i~l~~~~~~~~~~~~~~~~~~Gi~~~~~~~-~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 328 GEGLLRALLLGKDIGPQIVEKARDMQPDGLLLNAPRP-NLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred cceeEEEEEecCchHHHHHHHHHhccCCCEEEeecCC-CEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 9999999999433 34566666666 999876544 789999999999999999999999998764
No 46
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-64 Score=507.44 Aligned_cols=369 Identities=37% Similarity=0.603 Sum_probs=325.7
Q ss_pred ceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHhhcC---CC
Q 012368 81 PVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF---AD 156 (465)
Q Consensus 81 p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~---~~ 156 (465)
|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.++++++.+... .+.++...+++++|++..+ .+
T Consensus 23 p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~ 102 (421)
T PRK06777 23 DFYAERAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPIDGPA 102 (421)
T ss_pred CeeEEeeecCEEEeCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCCCCc
Confidence 7899999999999999999999999999999999999999999999998755322 3466778899999999875 47
Q ss_pred eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC-CCcCCCCCCCCCCceEeeCCC-
Q 012368 157 RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYRSPFEPVMPGVNFVEYGN- 234 (465)
Q Consensus 157 ~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d- 234 (465)
+++|++||+||++.|+|+|+.+|+ +.+||.++++|||++.+++++++. ..++..+.|..+++.++|+++
T Consensus 103 ~~~f~~sGseA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~ 173 (421)
T PRK06777 103 KTAFFTTGAEAVENAVKIARAYTG---------RPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNE 173 (421)
T ss_pred eEEEeCCcHHHHHHHHHHHHHhhC---------CCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcc
Confidence 999999999999999999999875 788999999999999999987764 234444555556666666554
Q ss_pred ---------HHHHHhhcC----CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccc
Q 012368 235 ---------IEATRKLIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAH 301 (465)
Q Consensus 235 ---------~~~le~~l~----~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~ 301 (465)
++.++++++ ++++++||+||+++++|+.+++++|+++|+++|++||++||+||||+||||+|.++++
T Consensus 174 ~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~ 253 (421)
T PRK06777 174 LHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAM 253 (421)
T ss_pred ccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhh
Confidence 667888774 3579999999999999998999999999999999999999999999999999998888
Q ss_pred cccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 012368 302 EHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKET 381 (465)
Q Consensus 302 ~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~ 381 (465)
+++++.||++|+||++++|+|+|++++++++++.+.+..+.+||++||++|+|+.++|+.+++++++++++++++++++.
T Consensus 254 ~~~~~~pDiv~~sK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~ 333 (421)
T PRK06777 254 EYYDVKPDLITMAKSLGGGMPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEV 333 (421)
T ss_pred hhcCCCCCEEeeehhhcCCCceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999998877788999999999999999999998889999999999999999
Q ss_pred HHHHHHcCCCceeeeccceEEEEEecCC---------hHHHHHHHHHCCceEeecCC-CCEEEEecCCCCcHHHHHHHHH
Q 012368 382 LKQKLARNPHVKDVRGLGLIIGIEFDVS---------ATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVE 451 (465)
Q Consensus 382 l~~~~~~~~~~~~~~~~g~~~~i~~~~~---------~~~~~~~l~~~Gv~v~~~~~-~~~lRi~~~~~~t~e~i~~~l~ 451 (465)
|+++..++|.+..+++.|+|+.+++..+ ...+...|+++||++.+++. ++++||.||+++|+++++++++
T Consensus 334 L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~lr~~ppl~i~~~~i~~~~~ 413 (421)
T PRK06777 334 LEKAKASCPAIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVHGNVIRFLYPLTIPDAQFSKALN 413 (421)
T ss_pred HHHHHHhCCCeEEecCceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCCCCHHHHHHHHH
Confidence 9999888888889999999999988321 23456667899999988753 5799999999999999999999
Q ss_pred HHHHHHH
Q 012368 452 ILCKTLP 458 (465)
Q Consensus 452 ~l~~~l~ 458 (465)
+|++++.
T Consensus 414 ~l~~~l~ 420 (421)
T PRK06777 414 ILTRLLA 420 (421)
T ss_pred HHHHHHh
Confidence 9998874
No 47
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=1.1e-64 Score=507.43 Aligned_cols=372 Identities=32% Similarity=0.512 Sum_probs=324.3
Q ss_pred ceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHhhcC--CCe
Q 012368 81 PVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF--ADR 157 (465)
Q Consensus 81 p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~--~~~ 157 (465)
|+.+++++|+++||.|||+||||.++++++++||+||+|.+|+.+|++++.+... .+.++...+|+++|++..+ .++
T Consensus 26 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~ 105 (428)
T PRK07986 26 VYPVVSAEGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPLEC 105 (428)
T ss_pred CeeEEeeeeeEEEeCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCCcCE
Confidence 4789999999999999999999999999999999999999999999998655433 3467889999999999886 589
Q ss_pred EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC-CCcCCCCCCCCCCceEee-----
Q 012368 158 VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYRSPFEPVMPGVNFVE----- 231 (465)
Q Consensus 158 v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----- 231 (465)
++|++||+||++.|+|+++.|+..++. ++.+||.++++|||.+.+++++++. ..+...+.+..+++.++|
T Consensus 106 v~f~~SGsEAve~AlklAr~~~~~~g~----~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 181 (428)
T PRK07986 106 VFLADSGSVAVEVAMKMALQYWQAKGE----PRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSR 181 (428)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCC----CCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcc
Confidence 999999999999999999998542221 4788999999999999998887653 223334445445544443
Q ss_pred ------CCCHHHHHhhcC--CCCeEEEEEccc-CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccccc
Q 012368 232 ------YGNIEATRKLIQ--PGKTAAVFVEPI-QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHE 302 (465)
Q Consensus 232 ------~~d~~~le~~l~--~~~~a~vi~ep~-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~ 302 (465)
++|++++++.++ ++++++||+||+ ++++|+++++++||++|+++|++||++||+|||++||||+|.+|+++
T Consensus 182 ~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~ 261 (428)
T PRK07986 182 FDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACE 261 (428)
T ss_pred cchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeec
Confidence 346788888886 457999999996 99999999999999999999999999999999999999999999999
Q ss_pred ccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccCC-----CCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 012368 303 HYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYG-----DHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGH 376 (465)
Q Consensus 303 ~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~-----~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~ 376 (465)
++++.||++|+||+++|| +|+|++++++++++.+... .+++||++||++++|+.++|+.++++++.++++++++
T Consensus 262 ~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~ 341 (428)
T PRK07986 262 HAGIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEA 341 (428)
T ss_pred ccCCCCCEEEechhhhCCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999999999999999999 6999999999999988653 3788999999999999999999988899999999999
Q ss_pred HHHHHHHHHHHcCCCceeeeccceEEEEEec--CChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHH
Q 012368 377 YFKETLKQKLARNPHVKDVRGLGLIIGIEFD--VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILC 454 (465)
Q Consensus 377 ~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~--~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~ 454 (465)
++++.|+++. +++.+..+++.|+++.+++. .....+.+.|+++||++.+.+ +++||.||+++|++||++++++|+
T Consensus 342 ~l~~~l~~l~-~~~~i~~vRg~Gl~~~ve~~~~~~~~~~~~~l~~~Gl~~~~~g--~~i~~~Ppl~it~~ei~~~~~~l~ 418 (428)
T PRK07986 342 QLREELAPLR-DAPMVADVRVLGAIGVVETTRPVNMAALQRFFVEQGVWIRPFG--KLIYLMPPYIILPEQLQRLTAAVN 418 (428)
T ss_pred HHHHHHHHHh-cCCCEEeEeccceEEEEEeCCcccHHHHHHHHHHCCcEEEecC--CEEEEeCCCCCCHHHHHHHHHHHH
Confidence 9999999874 57888899999999999984 235678899999999998765 789999999999999999999999
Q ss_pred HHHHH
Q 012368 455 KTLPV 459 (465)
Q Consensus 455 ~~l~~ 459 (465)
+++.+
T Consensus 419 ~~l~~ 423 (428)
T PRK07986 419 RAVQD 423 (428)
T ss_pred HHHhh
Confidence 99854
No 48
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=3e-64 Score=509.59 Aligned_cols=373 Identities=39% Similarity=0.734 Sum_probs=327.6
Q ss_pred ceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhccccc-CCCCCHHHHHHHHHHHhhcC--CCe
Q 012368 81 PVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS-NMYYSIPQIELAKRLVACSF--ADR 157 (465)
Q Consensus 81 p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~--~~~ 157 (465)
|+++++++|+++||.|||+||||++++++++|||+||+|.+|+.++++++.+.+ ..+.++...+|+++|++..+ .++
T Consensus 26 ~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~ 105 (433)
T PRK08117 26 NLPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGGLDC 105 (433)
T ss_pred CceEEeeeeeEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCE
Confidence 489999999999999999999999999999999999999999999998865543 23567779999999999984 689
Q ss_pred EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC-CCcCCCCCCCCCCceEeeCC---
Q 012368 158 VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYRSPFEPVMPGVNFVEYG--- 233 (465)
Q Consensus 158 v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--- 233 (465)
++|+|||+|||+.|+|+|+.+++ +.+||.++++|||++.+++++++. ..+...+.+..+++.++|++
T Consensus 106 v~f~~SGseA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (433)
T PRK08117 106 FFFSNSGAEAIEGALKLAKHVTK---------RPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCD 176 (433)
T ss_pred EEEeCcHHHHHHHHHHHHHHhcC---------CCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccc
Confidence 99999999999999999999874 788999999999999998876642 33444445555666666553
Q ss_pred --------------CHHHHHhhcC----CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCC
Q 012368 234 --------------NIEATRKLIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT 295 (465)
Q Consensus 234 --------------d~~~le~~l~----~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~ 295 (465)
|+++++++++ .+++++||+||+++++|.++++++|+++|+++|++||++||+||||+||||+
T Consensus 177 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~ 256 (433)
T PRK08117 177 RCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRT 256 (433)
T ss_pred cccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCcc
Confidence 4566777764 3579999999999999999999999999999999999999999999999999
Q ss_pred CccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHH
Q 012368 296 GYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKG 375 (465)
Q Consensus 296 g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~ 375 (465)
|.+++++++++.||++|+||++++|+|+|++++++++++.+....+++||++||++++|++++|+.++++++++++++++
T Consensus 257 G~~~~~~~~gv~pDi~t~sK~lg~G~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~~~l~~~~~~~g 336 (433)
T PRK08117 257 GEWFAAQTFGVVPDIMTIAKGIASGLPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALATLEVIKEEKLLDNANEMG 336 (433)
T ss_pred ccchhHhhcCCCCCEeehhhhccCCCcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 99888888999999999999999999999999999999988766788999999999999999999997788999999999
Q ss_pred HHHHHHHHHHHHcCCCceeeeccceEEEEEecC--------ChHHHHHHHHHCCceEeecCC-CCEEEEecCCCCcHHHH
Q 012368 376 HYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV--------SATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQEL 446 (465)
Q Consensus 376 ~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~--------~~~~~~~~l~~~Gv~v~~~~~-~~~lRi~~~~~~t~e~i 446 (465)
+++++.|+++...++.+..+++.|+++++++.. ....+.+.|+++||++.+.+. ++++||+|++++|+++|
T Consensus 337 ~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~lRl~p~~~~t~~~i 416 (433)
T PRK08117 337 AYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPPLTVTKEEI 416 (433)
T ss_pred HHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecCCCCCEEEEeCCccCCHHHH
Confidence 999999999877888888999999999999821 134577888999999876543 47899999999999999
Q ss_pred HHHHHHHHHHHHHhhh
Q 012368 447 DQAVEILCKTLPVLDS 462 (465)
Q Consensus 447 ~~~l~~l~~~l~~~~~ 462 (465)
++++++|+++++++.+
T Consensus 417 ~~~~~~l~~~l~~~~~ 432 (433)
T PRK08117 417 DEGLDILDEALTEYEA 432 (433)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999987753
No 49
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.5e-64 Score=506.70 Aligned_cols=374 Identities=29% Similarity=0.453 Sum_probs=322.4
Q ss_pred CCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHhhcC--C
Q 012368 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF--A 155 (465)
Q Consensus 79 ~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~--~ 155 (465)
..|+++++++|+|+||.||++||||.+++++.++||+||+|.+|+.++++++.+... .+.++...+|+++|++..+ .
T Consensus 21 ~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 100 (422)
T PRK05630 21 VRNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNGL 100 (422)
T ss_pred CCCeeEEeceeeEEEECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCCc
Confidence 358999999999999999999999999999999999999999999999998665433 3467778999999999875 6
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC-CCcCCCCCCCCCCceEeeCC-
Q 012368 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYRSPFEPVMPGVNFVEYG- 233 (465)
Q Consensus 156 ~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~- 233 (465)
++++|++||+||++.|+|+|+.|+..++.+ +|.+||.+.++|||.+.+++++++. ..+...+.+..+++.++|++
T Consensus 101 ~~v~f~~SGseA~e~AlklAr~~~~~~g~~---~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~ 177 (422)
T PRK05630 101 DHVFYSDSGSVSVEVAIKMALQYSKGQGHP---ERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPP 177 (422)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCC---CCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCc
Confidence 899999999999999999999997533322 4778999999999999999888753 22333344444444444332
Q ss_pred -------C----HHHHHhhcCCCCeEEEEEccc-CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccc
Q 012368 234 -------N----IEATRKLIQPGKTAAVFVEPI-QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAH 301 (465)
Q Consensus 234 -------d----~~~le~~l~~~~~a~vi~ep~-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~ 301 (465)
| ++.+++++. +++++||+||+ ++.+|+++++++|+++|+++|++||++||+|||++||||+|.+|++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~-~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~ 256 (422)
T PRK05630 178 VRGSSPQEISEYLRSLELLID-ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFAT 256 (422)
T ss_pred ccCCChHHHHHHHHHHHHHHh-hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHH
Confidence 2 245566664 57999999996 9999999999999999999999999999999999999999999999
Q ss_pred cccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccC------CCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHH
Q 012368 302 EHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY------GDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKK 374 (465)
Q Consensus 302 ~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~------~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~ 374 (465)
+++++.||++|+||+++|| +|+|++++++++++.+.. ..|++||++||++|+++.++|+.++++++.++++++
T Consensus 257 ~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~~ 336 (422)
T PRK05630 257 LAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKRI 336 (422)
T ss_pred HhcCCCCCeeeeechhhcCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 9999999999999999999 599999999999988752 147899999999999999999999888899999999
Q ss_pred HHHHHHHHHHHHHcCCCceeeeccceEEEEEecC--ChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHH
Q 012368 375 GHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEI 452 (465)
Q Consensus 375 ~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~ 452 (465)
++++++.|+.+ .+++.+..+++.|+++.+++.. ....+.+.|+++|+++.+.+ +++||+||+++|++|+++++++
T Consensus 337 g~~l~~~L~~l-~~~~~v~~vRg~Gl~~~ie~~~~~~~~~~~~~~~~~Gl~~~~~g--~~l~~~PpL~it~~~i~~~~~~ 413 (422)
T PRK05630 337 EAELIAGLSPL-AHLPGVADVRVLGAIGVVEMEQPVDMEEATQAAVDHGVWLRPFG--RLVYVMPPYITTSEQIAQICAA 413 (422)
T ss_pred HHHHHHHHHHh-hcCCCeeeeeccccEEEEEECCcccHHHHHHHHHHCCeEEEecC--CEEEEECCccCCHHHHHHHHHH
Confidence 99999999875 4578888999999999999942 35678899999999998764 7999999999999999999999
Q ss_pred HHHHHHH
Q 012368 453 LCKTLPV 459 (465)
Q Consensus 453 l~~~l~~ 459 (465)
|+++++.
T Consensus 414 l~~al~~ 420 (422)
T PRK05630 414 LAAAVKA 420 (422)
T ss_pred HHHHHhc
Confidence 9999864
No 50
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=4.3e-64 Score=506.64 Aligned_cols=386 Identities=42% Similarity=0.711 Sum_probs=331.1
Q ss_pred HHHHHHHHhccccccC-CCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCH
Q 012368 63 KEVMEAEKKLLVGTYN-RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSI 140 (465)
Q Consensus 63 ~~~~~~~~~~~~~~~~-~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~ 140 (465)
+++.+...++..+.+. +.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.++++++.+... .+.++
T Consensus 18 ~~l~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~ 97 (441)
T PRK05769 18 REIIERDEKYLAQSTRRWYPLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLTDFYYE 97 (441)
T ss_pred HHHHHHHHHhhCcccccCCCeeEEecceEEEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccCcccCCH
Confidence 3344333344444443 468999999999999999999999999999999999999999999999998655433 35677
Q ss_pred HHHHHHHHHHhhcC---CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC-CCc
Q 012368 141 PQIELAKRLVACSF---ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHY 216 (465)
Q Consensus 141 ~~~~la~~l~~~~~---~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~ 216 (465)
...+|+++|++..+ .++|+|++||+||++.|+|+|+.+|+ +++||.++++|||++.+++++++. ..+
T Consensus 98 ~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tg---------r~~Ii~~~~~yHG~t~~~ls~t~~~~~~ 168 (441)
T PRK05769 98 PAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTG---------RKYIIAFLGAFHGRTYGSLSLTASKPVQ 168 (441)
T ss_pred HHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhC---------CCeEEEECCCcCCccHHHHHhcCCCccc
Confidence 78999999999875 47999999999999999999999985 789999999999999999887653 334
Q ss_pred CCCCCCCCCCceEeeCCC------------------HHHHHh-hcC----CCCeEEEEEcccCCCCCcccCCHHHHHHHH
Q 012368 217 RSPFEPVMPGVNFVEYGN------------------IEATRK-LIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLR 273 (465)
Q Consensus 217 ~~~~~~~~~~~~~~~~~d------------------~~~le~-~l~----~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~ 273 (465)
...+.+..+++..+|+++ ++.+++ +++ ++++++||+||+++++|+++++++||++|+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~ 248 (441)
T PRK05769 169 RKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELR 248 (441)
T ss_pred ccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHH
Confidence 445556666766665532 234666 332 457999999999999999999999999999
Q ss_pred HHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHH
Q 012368 274 DACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCN 353 (465)
Q Consensus 274 ~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~ 353 (465)
++|++||+++|+|||++||||+|.+++++++++.||++|+||++++|+|+|++++++++++.+ ...+++||++||++++
T Consensus 249 ~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt~~K~l~~G~p~gav~~~~~i~~~~-~~~~~~T~~g~p~~~a 327 (441)
T PRK05769 249 KLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLAKAIAGGLPLGAVIGRAELMFLP-PGSHANTFGGNPVAAA 327 (441)
T ss_pred HHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEEEEcccccCCcccEEEEEehhhhhcC-CCCCCCCCCcCHHHHH
Confidence 999999999999999999999999888899999999999999999999999999999998644 3568899999999999
Q ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCC--------hHHHHHHHHHCCceEe
Q 012368 354 AAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS--------ATPVVDACRDSGLLVL 425 (465)
Q Consensus 354 aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~--------~~~~~~~l~~~Gv~v~ 425 (465)
++.++|+++++ ++++++++++++|++.|+++..+++.+..+++.|+++.+++..+ ...+.+.|+++||++.
T Consensus 328 aa~a~L~~l~~-~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~ 406 (441)
T PRK05769 328 AALATLEELEE-GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLL 406 (441)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEe
Confidence 99999999988 99999999999999999999888898889999999999998321 3457788899999998
Q ss_pred ecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 426 TAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 426 ~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
+.+. +.+||+|++++|++||+++++++++++.++
T Consensus 407 ~~~~-~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 407 GAGK-SAIRIIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred cCCC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 7655 789999999999999999999999998764
No 51
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=3.4e-64 Score=505.83 Aligned_cols=376 Identities=36% Similarity=0.577 Sum_probs=330.0
Q ss_pred ccccCC-CceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHh
Q 012368 74 VGTYNR-APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVA 151 (465)
Q Consensus 74 ~~~~~~-~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~ 151 (465)
.+.+.+ .|+++++++|+++||.|||+||||.+++++.++||+||+|.+|+.+++++..+... .+.++...+++++|++
T Consensus 15 ~~~~~~~~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~ 94 (421)
T PRK09792 15 PRGVGVMCNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINA 94 (421)
T ss_pred ccccccCCCeeEEeccccEEEeCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHH
Confidence 334433 47899999999999999999999999999999999999999999999998654322 3467778999999999
Q ss_pred hcC---CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC-CCcCCCCCCCCCCc
Q 012368 152 CSF---ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-EHYRSPFEPVMPGV 227 (465)
Q Consensus 152 ~~~---~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~ 227 (465)
..+ .++++|++||+||++.|+|+|+.+|+ +.+||.++++|||++.+++++++. ..+..++.+..+++
T Consensus 95 ~~p~~~~~~~~f~~sGseA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~ 165 (421)
T PRK09792 95 LAPVSGQAKTAFFTTGAEAVENAVKIARAHTG---------RPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSV 165 (421)
T ss_pred hCCCCCCceEEEeCChHHHHHHHHHHHHHhcC---------CCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCc
Confidence 875 37999999999999999999999874 778999999999999999988764 23444555555666
Q ss_pred eEeeCC----------CHHHHHhhcC----CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 228 NFVEYG----------NIEATRKLIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 228 ~~~~~~----------d~~~le~~l~----~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
..+|++ ++++++++++ .+++++||+||+++++|+.+++++|+++|+++|++||++||+|||++|||
T Consensus 166 ~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~g 245 (421)
T PRK09792 166 YHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFA 245 (421)
T ss_pred EEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 666663 3578888885 35799999999999999988999999999999999999999999999999
Q ss_pred CCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHH
Q 012368 294 RTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSK 373 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~ 373 (465)
|+|.+++++++++.||++||||++++|+|+|++++++++++.+....+.+||++||++|+|++++|+.++++++++++++
T Consensus 246 r~G~~~a~~~~~~~pDi~t~gK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~ 325 (421)
T PRK09792 246 RTGKLFAMDHYADKPDLMTMAKSLAGGMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQ 325 (421)
T ss_pred CCCchhHHHhcCCCCcEEEeehhhcCCCceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 99998888999999999999999999999999999999999988777889999999999999999999988889999999
Q ss_pred HHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCC---------hHHHHHHHHHCCceEeecCC-CCEEEEecCCCCcH
Q 012368 374 KGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS---------ATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISE 443 (465)
Q Consensus 374 ~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~---------~~~~~~~l~~~Gv~v~~~~~-~~~lRi~~~~~~t~ 443 (465)
+++++++.|+++.+++|.+..++|.|+++++++... ...+...|+++||++.+.+. ++.+||.|++++++
T Consensus 326 ~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g~~~~~irl~P~l~i~~ 405 (421)
T PRK09792 326 LGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPD 405 (421)
T ss_pred HHHHHHHHHHHHHHhCCCcceecccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeecCCCCCEEEEeCCCcCCH
Confidence 999999999999888998889999999999999321 35688889999999976433 58999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 012368 444 QELDQAVEILCKTLP 458 (465)
Q Consensus 444 e~i~~~l~~l~~~l~ 458 (465)
+|+++++++|++++.
T Consensus 406 ~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 406 AQFDAAMKILQDALS 420 (421)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999874
No 52
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=2.2e-64 Score=508.79 Aligned_cols=377 Identities=33% Similarity=0.581 Sum_probs=328.3
Q ss_pred CCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHhhcC--
Q 012368 78 NRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF-- 154 (465)
Q Consensus 78 ~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~-- 154 (465)
.+.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.++++++.+.+. .+.++...+|+++|++..+
T Consensus 29 ~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~ 108 (445)
T PRK09221 29 KAAPRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAPGG 108 (445)
T ss_pred CCCCceEEeccccEEEeCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCC
Confidence 3568999999999999999999999999999999999999999999999998655433 3567778999999999875
Q ss_pred CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCC
Q 012368 155 ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGN 234 (465)
Q Consensus 155 ~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 234 (465)
.++|+|++||+||++.|+|+|+.++..++.+ .+.+||.++++|||.+.+++++++.+.+...+.+..+++.++|+++
T Consensus 109 ~~~v~f~~sGseAve~AlklAr~~~~~~g~~---~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (445)
T PRK09221 109 LDHVFFTNSGSESVDTALKIALAYHRARGQG---TRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTL 185 (445)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC---CCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCc
Confidence 6899999999999999999999997533221 3678999999999999999988876655555555556665555432
Q ss_pred ------------------HHHHHhhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 235 ------------------IEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 235 ------------------~~~le~~l~---~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
+++++++++ .+++++||+||+++++|++.++++|+++|+++|++||++||+|||++|||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~G 265 (445)
T PRK09221 186 DLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFG 265 (445)
T ss_pred cccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCC
Confidence 357787775 35799999999999999999999999999999999999999999999999
Q ss_pred CCCccccccccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccC-------CCCcCCCCChHHHHHHHHHHHHHhcCc
Q 012368 294 RTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY-------GDHGSTFAGSPLVCNAAIAVLDKISNP 365 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~-------~~~~~t~~~~~~~~~aa~a~L~~~~~~ 365 (465)
|+|.+|+++++++.||++|+||++++| +|+|++++++++++.+.. ..+++||++||+++++++++|+.++++
T Consensus 266 RtG~~~~~~~~gv~PDi~~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~ 345 (445)
T PRK09221 266 RLGAAFAAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREE 345 (445)
T ss_pred cCchhhHHHhcCCCCCEEEeccccccCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999998 799999999999988743 136789999999999999999999888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC-------ChHHHHHHHHHCCceEeecCCCCEEEEecC
Q 012368 366 AFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV-------SATPVVDACRDSGLLVLTAGKGNVVRLVPP 438 (465)
Q Consensus 366 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~-------~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~ 438 (465)
++.++++++++++++.|+++ .+++.+..+++.|++..+++.. ....+.+.|+++||++.+.+ +.+||+|+
T Consensus 346 ~l~~~~~~~g~~l~~~l~~l-~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~--~~lr~~Pp 422 (445)
T PRK09221 346 DLFERAAELAPYFEDAVHSL-KGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYTG--DTIALSPP 422 (445)
T ss_pred cHHHHHHHHHHHHHHHHHhh-ccCCCEEEEecCceEEEEEEecccccccchHHHHHHHHHHCCeEEeecC--CEEEEECC
Confidence 99999999999999999987 4678788999999999998831 13468889999999998754 78999999
Q ss_pred CCCcHHHHHHHHHHHHHHHHHh
Q 012368 439 LIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 439 ~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
+++|++||++++++|++++.++
T Consensus 423 l~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 423 LIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred ccCCHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999764
No 53
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=9.8e-64 Score=508.50 Aligned_cols=408 Identities=34% Similarity=0.554 Sum_probs=358.0
Q ss_pred hhccCCCCCCcchHHHHHHHHhccccccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhh
Q 012368 50 AARGSAGGLGRNNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANV 129 (465)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~ 129 (465)
..++...++++.++.+++.+.++..+.|.+.|+++++++|+|+||.||++||||++++++.++||+||+|++|+.+++++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~ 106 (474)
T PLN02624 27 LPEGSAPSLSDSSAHLIELEEKYSAHNYHPIPVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEK 106 (474)
T ss_pred CCCCCCCCCCcchHHHHHHHHHhhccccCCCCceEEeeeeCEEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHh
Confidence 33444555677788888888888777787889999999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCcccccc
Q 012368 130 LTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALA 209 (465)
Q Consensus 130 ~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~ 209 (465)
+.+.+..+.++...+|+++|++.++.++++|++||+||++.|+|+++.++....+. ...+.+||.+.++|||++.++++
T Consensus 107 ~~~~~~~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~-~~~~~~ii~~~~~yHG~t~~~~s 185 (474)
T PLN02624 107 LTLSSRAFYNDKFPEFAEYLTSMFGYDMVLPMNTGAEGVETAIKLARKWGYEKKGI-PKNEAIIVSCCGCFHGRTLAAIS 185 (474)
T ss_pred cCCcccccCCHHHHHHHHHHHhhcCCCeEEEeCChHHHHHHHHHHHHHHHHhhcCC-CCCCcEEEEECCCcCCCCHHHhh
Confidence 76655556778899999999999888899999999999999999999875211100 00245799999999999999999
Q ss_pred ccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcC--CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEec
Q 012368 210 LTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDE 287 (465)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~--~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DE 287 (465)
+++.+.+...+.|..+++.++|++|++.++++++ ..++++|++||+++++|.++++++||++|+++|++||++||+||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DE 265 (474)
T PLN02624 186 MSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADE 265 (474)
T ss_pred cCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 8877766666777778888899999999999996 35799999999999999999999999999999999999999999
Q ss_pred cccCCCCCCccccccccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCch
Q 012368 288 VQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPA 366 (465)
Q Consensus 288 v~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~ 366 (465)
||+||||+|.+++.+++++.||++++||++++| +|+|++++++++++.+.+..++.||++||++++++.++|+.+++++
T Consensus 266 v~tG~GrtG~~~a~~~~~i~pDiv~lsK~lggG~~pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~ 345 (474)
T PLN02624 266 IQTGLARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEK 345 (474)
T ss_pred cccCcCcCcchhhHHhcCCCCCEEEecccccCCCCcceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhch
Confidence 999999999988888889999999999999987 8999999999999988777788999999999999999999988788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCC-CceeeeccceEEEEEecC------ChHHHHHHHHHCCceEeecCCCCEEEEecCC
Q 012368 367 FLASVSKKGHYFKETLKQKLARNP-HVKDVRGLGLIIGIEFDV------SATPVVDACRDSGLLVLTAGKGNVVRLVPPL 439 (465)
Q Consensus 367 ~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~g~~~~i~~~~------~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~ 439 (465)
+.+++.++++++++.|+++..+++ .+..+++.|+++.++++. .+.++++.|+++||++.+.+. +++||+|++
T Consensus 346 l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~~~-~~lR~~p~l 424 (474)
T PLN02624 346 LAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAKPTHD-TIIRLAPPL 424 (474)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCCcChHHHHHHHHHHHhCCeEEecCCC-CEEEEECCc
Confidence 999999999999999999877777 466788999999988842 135788899999999998764 889999999
Q ss_pred CCcHHHHHHHHHHHHHHHHH
Q 012368 440 IISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 440 ~~t~e~i~~~l~~l~~~l~~ 459 (465)
.+|+++|++++++|++++.+
T Consensus 425 ~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 425 SISEDELQECSKALSDVLEH 444 (474)
T ss_pred cCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999998765
No 54
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=8.4e-64 Score=507.80 Aligned_cols=394 Identities=32% Similarity=0.584 Sum_probs=334.1
Q ss_pred chHHHHHHHHhccccccC-CCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhccccc-CCCC
Q 012368 61 NNKEVMEAEKKLLVGTYN-RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS-NMYY 138 (465)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~-~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~-~~~~ 138 (465)
+++++.++..++....+. ..|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.++++++.+.. ..+.
T Consensus 16 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~ 95 (451)
T PRK06918 16 KAASLLERRQNIVPKGVSNGIPTFAQSANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNVMM 95 (451)
T ss_pred CHHHHHHHHHHhhccccccCCCceEEeccccEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccccccc
Confidence 344455444444443332 34789999999999999999999999999999999999999999999999865542 2345
Q ss_pred CHHHHHHHHHHHhhcC--C-CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC-C
Q 012368 139 SIPQIELAKRLVACSF--A-DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK-E 214 (465)
Q Consensus 139 ~~~~~~la~~l~~~~~--~-~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~-~ 214 (465)
++...+++++|++..+ . ++|+|++||+||++.|+|+||.+|+ +.+||.++++|||++.+++++++. .
T Consensus 96 ~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~~~ls~~~~~~ 166 (451)
T PRK06918 96 YEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTK---------RQGIISFSRGFHGRTLMTMTMTSKVK 166 (451)
T ss_pred cHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhC---------CCcEEEECCCcCccchhhhhhcCCCc
Confidence 7779999999999986 2 6999999999999999999999985 788999999999999999987764 2
Q ss_pred CcCCCCCCCCCCceEeeCCC-----------------HHHHHhhc----CCCCeEEEEEcccCCCCCcccCCHHHHHHHH
Q 012368 215 HYRSPFEPVMPGVNFVEYGN-----------------IEATRKLI----QPGKTAAVFVEPIQGEGGIYSATKEFLQFLR 273 (465)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~l----~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~ 273 (465)
.++..+.+..+++.++|+++ ++.+++.+ .++++++||+||+++++|.++++++|+++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~ 246 (451)
T PRK06918 167 PYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVR 246 (451)
T ss_pred cccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHH
Confidence 34444555556665555432 12344433 3468999999999999999999999999999
Q ss_pred HHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHH
Q 012368 274 DACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCN 353 (465)
Q Consensus 274 ~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~ 353 (465)
++|++||++||+||||+||||+|.+++++.+++.||+++|||++++|+|+||+++++++++.+.+..+.+||++||++|+
T Consensus 247 ~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~a 326 (451)
T PRK06918 247 NICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLITVSKSLGAGVPISGVIGRKEIMDESAPGELGGTYAGSPLGCA 326 (451)
T ss_pred HHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEeeehhhcCCCccEEEEEcHHHHhccCCCCcCcCCCcCHHHHH
Confidence 99999999999999999999999888888899999999999999999999999999999999877778899999999999
Q ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEec------C----ChHHHHHHHHHCCce
Q 012368 354 AAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFD------V----SATPVVDACRDSGLL 423 (465)
Q Consensus 354 aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~------~----~~~~~~~~l~~~Gv~ 423 (465)
++.++|+.++++++.+++++.+++++++|+++..+++.+..+++.|+++.+++. . ....+.+.|+++||+
T Consensus 327 aa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvl 406 (451)
T PRK06918 327 AALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLL 406 (451)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeE
Confidence 999999999888999999999999999999987778878889999999998872 1 134577778899999
Q ss_pred EeecCC-CCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhhc
Q 012368 424 VLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLPVLDSN 463 (465)
Q Consensus 424 v~~~~~-~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 463 (465)
+.+++. ++++||+|++++|+++|++++++|++++.++...
T Consensus 407 v~~~~~~~~~lrl~p~l~~t~~~id~~l~~l~~~l~~~~~~ 447 (451)
T PRK06918 407 LLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEESLQACYEK 447 (451)
T ss_pred EeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHHHHh
Confidence 988642 5789999999999999999999999999887544
No 55
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=4.1e-64 Score=506.33 Aligned_cols=372 Identities=37% Similarity=0.598 Sum_probs=326.1
Q ss_pred CCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHhhcC--
Q 012368 78 NRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF-- 154 (465)
Q Consensus 78 ~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~-- 154 (465)
++.|+++++++|+++||.|||+||||.+++++.++||+||+|.+|+.++++++.+... ...++...+++++|++..+
T Consensus 13 ~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~ 92 (420)
T TIGR00700 13 VTLPVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGS 92 (420)
T ss_pred CCCCeeEEeeeeeEEEeCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCC
Confidence 3579999999999999999999999999999999999999999999999998655332 2456778899999999875
Q ss_pred -CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCC-CcCCCCCCCCCCceEeeC
Q 012368 155 -ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE-HYRSPFEPVMPGVNFVEY 232 (465)
Q Consensus 155 -~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 232 (465)
.++++|++||+||++.|+|+|+.+|+ +.+||.++++|||++.+++++++.. .+...+.++.+++..+|+
T Consensus 93 ~~~~v~f~~sGseA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (420)
T TIGR00700 93 GPKKSVFFNSGAEAVENAVKIARSYTG---------RPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPL 163 (420)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHhcC---------CCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCC
Confidence 47999999999999999999999975 7789999999999999999877642 234445555566655554
Q ss_pred C----------------CHHHHHhhcC----CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 233 G----------------NIEATRKLIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 233 ~----------------d~~~le~~l~----~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
+ +++.+++++. ++++++||+||+++++|+++++++|+++|+++|++||++||+||||+||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~ 243 (420)
T TIGR00700 164 PYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGF 243 (420)
T ss_pred CccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCC
Confidence 2 2567777763 4689999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHH
Q 012368 293 GRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVS 372 (465)
Q Consensus 293 gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~ 372 (465)
||+|.+++++++++.||+++|||++++|+|+||+++++++++.+....+.+||++||++|+|++++|+.++++++.++++
T Consensus 244 gr~g~~~a~~~~~~~pDi~~lsK~l~~G~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~ 323 (420)
T TIGR00700 244 ARTGAMFACEHEGPEPDLITTAKSLADGLPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERAR 323 (420)
T ss_pred cccchhHHHhhcCCCCCEEEeeccccCCcceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHH
Confidence 99998888888999999999999999999999999999999998777788999999999999999999988889999999
Q ss_pred HHHHHHHHHHHHHHHcCCCceeeeccceEEEEEec-C----C----hHHHHHHHHHCCceEeecCC-CCEEEEecCCCCc
Q 012368 373 KKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFD-V----S----ATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIIS 442 (465)
Q Consensus 373 ~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~-~----~----~~~~~~~l~~~Gv~v~~~~~-~~~lRi~~~~~~t 442 (465)
+.++++++.|+++...+|.+..+++.|+|+++++. . + ...+.+.|+++||++.|++. ++++||+|+++++
T Consensus 324 ~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p~l~~~ 403 (420)
T TIGR00700 324 QIGRLVTDRLTTLKAVDPRIGDVRGLGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIG 403 (420)
T ss_pred HHHHHHHHHHHHHHhhCCCEEEeeccceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCCcC
Confidence 99999999999998888888899999999999882 1 1 34567777899999988653 5799999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 012368 443 EQELDQAVEILCKTLP 458 (465)
Q Consensus 443 ~e~i~~~l~~l~~~l~ 458 (465)
++++++++++|.+++.
T Consensus 404 ~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 404 DELLSEGLDILCAILA 419 (420)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999999874
No 56
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1e-63 Score=503.68 Aligned_cols=388 Identities=34% Similarity=0.602 Sum_probs=333.6
Q ss_pred HHHHHHHhccccccC--CCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCH
Q 012368 64 EVMEAEKKLLVGTYN--RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSI 140 (465)
Q Consensus 64 ~~~~~~~~~~~~~~~--~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~ 140 (465)
++++++.++..+.|. ..|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++.+... .+.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~ 84 (443)
T PRK08360 5 EIIERYSKVISPANRVTYYPLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYGFPV 84 (443)
T ss_pred HHHHHHHHhcccccccccCCceEEecceeEEEECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccccccCcH
Confidence 344445555555553 568999999999999999999999999999999999999999999999998765433 34467
Q ss_pred HHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCC-CcC
Q 012368 141 PQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE-HYR 217 (465)
Q Consensus 141 ~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~-~~~ 217 (465)
...+|+++|++..+ .++|+|++||+||++.|+|+|+.||+ +.+|+.+.++|||++.+++++++.. .+.
T Consensus 85 ~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~tg---------r~~ii~~~~~yHG~t~~a~s~~~~~~~~~ 155 (443)
T PRK08360 85 EPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYTK---------RRKILSYLRSYYGSTYGAMSLTGLDFPVR 155 (443)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhcC---------CCeEEEEeCCcCCcCHHHHHhcCCCcccc
Confidence 78999999999886 47999999999999999999999985 7899999999999999888876632 233
Q ss_pred CCCCCCCCCceEeeCCC-----------------HHHHHhhcC----CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHH
Q 012368 218 SPFEPVMPGVNFVEYGN-----------------IEATRKLIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDAC 276 (465)
Q Consensus 218 ~~~~~~~~~~~~~~~~d-----------------~~~le~~l~----~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~ 276 (465)
..+.+ .+++.++|+++ ++.++++++ .+++++||+||+++++|.++++++|+++|+++|
T Consensus 156 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~ 234 (443)
T PRK08360 156 ALVGE-LSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKIL 234 (443)
T ss_pred cCCCC-CCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHH
Confidence 33344 34555565543 345666664 357999999999999999999999999999999
Q ss_pred HHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHH
Q 012368 277 DDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAI 356 (465)
Q Consensus 277 ~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~ 356 (465)
++||++||+||||+||||+|.+++.+++++.||++|+||++++|+|+|++++++++++.+....+.+|+++||++|+++.
T Consensus 235 ~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiitlsK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~ 314 (443)
T PRK08360 235 DEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITLGKPLGGGLPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAAL 314 (443)
T ss_pred HHcCCEEEEeccccCCCcCccchhhhhcCCCCCEEEecccccCCceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHH
Confidence 99999999999999999999888888889999999999999999999999999999999876668889999999999999
Q ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC----------ChHHHHHHHHHCCceEee
Q 012368 357 AVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV----------SATPVVDACRDSGLLVLT 426 (465)
Q Consensus 357 a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~----------~~~~~~~~l~~~Gv~v~~ 426 (465)
++|+.++++++.++++++++++++.|+++..+++.+..+++.|+++++++.. .+..+...|+++|+++.+
T Consensus 315 a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~ 394 (443)
T PRK08360 315 AVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTF 394 (443)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEee
Confidence 9999998888999999999999999999888889889999999999999831 124678889999999876
Q ss_pred cCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 427 AGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 427 ~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
.+. +.+||+||+++|++||++++++++++++.+++
T Consensus 395 ~~~-~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 395 FSG-NVLRIQPPLTIEKEVLDEGLDILEEAIEDVEE 429 (443)
T ss_pred cCC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 543 88999999999999999999999999987753
No 57
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=4e-64 Score=503.97 Aligned_cols=376 Identities=35% Similarity=0.554 Sum_probs=327.2
Q ss_pred ccccC-CCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHh
Q 012368 74 VGTYN-RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVA 151 (465)
Q Consensus 74 ~~~~~-~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~ 151 (465)
.+.|. +.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+++++..+... .+.++...+|+++|++
T Consensus 10 ~~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~ 89 (412)
T TIGR02407 10 VRSYCRSFPTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNE 89 (412)
T ss_pred HhccCCCCCceEEecccCEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHH
Confidence 33444 478999999999999999999999999999999999999999999999986444322 2456778899999998
Q ss_pred hc--C--C-CeEEe-cCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCC
Q 012368 152 CS--F--A-DRVFF-SNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMP 225 (465)
Q Consensus 152 ~~--~--~-~~v~~-~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~ 225 (465)
.. + . ++++| +|||+||++.|+|+|+.+++ |.+||.++++|||++.+++++++...+...+.+..+
T Consensus 90 ~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~ 160 (412)
T TIGR02407 90 IILKPRGLDYKVQFPGPTGTNAVESALKLARKVTG---------RSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLS 160 (412)
T ss_pred hccCccCCCceEEEeCCCchHHHHHHHHHHhhhcC---------CCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCC
Confidence 74 2 2 35666 59999999999999999874 789999999999999999998876665655655556
Q ss_pred CceEeeCC--------CHHHHHhhcCC-----CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 226 GVNFVEYG--------NIEATRKLIQP-----GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 226 ~~~~~~~~--------d~~~le~~l~~-----~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
++.++|++ +++.+++++.. +++++||+||+++++|+++++++|+++|+++|++||++||+||||+||
T Consensus 161 ~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~ 240 (412)
T TIGR02407 161 NVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGC 240 (412)
T ss_pred CeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 77777774 47788888852 468999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccccCCcccEEEecccCCC-ccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHH-hcCchHHHH
Q 012368 293 GRTGYLWAHEHYGIFPDIMTLAKPLAG-GLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDK-ISNPAFLAS 370 (465)
Q Consensus 293 gr~g~~~~~~~~~~~pdi~t~sK~lg~-G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~-~~~~~~~~~ 370 (465)
||+|.+++++++++.||++++||++++ |+|+|++++++++ +.+.+..+.+||++||++++++.++|+. ++++++.++
T Consensus 241 GRtG~~~a~~~~~v~PDi~~~~K~lg~~G~pigav~~~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~ 319 (412)
T TIGR02407 241 GRTGTFFSFEPAGIEPDIVCLSKSISGYGLPLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKA 319 (412)
T ss_pred CccchhHHhcccCCCCCEEEechhccCCccceeEEEEchhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHH
Confidence 999999999999999999999999998 9999999999887 6666667889999999999999999995 777889999
Q ss_pred HHHHHHHHHHHHHHHHHcCC-CceeeeccceEEEEEecC--ChHHHHHHHHHCCceEeecCC-CCEEEEecCCCCcHHHH
Q 012368 371 VSKKGHYFKETLKQKLARNP-HVKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQEL 446 (465)
Q Consensus 371 ~~~~~~~l~~~l~~~~~~~~-~~~~~~~~g~~~~i~~~~--~~~~~~~~l~~~Gv~v~~~~~-~~~lRi~~~~~~t~e~i 446 (465)
+++++++++++|+++...++ .+..+++.|++++++++. ....+...|+++||++.+.+. ++.+||+|++++|++|+
T Consensus 320 ~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~~~~~~~~~~~~~~~Gv~v~~~~~~~~~lr~~p~l~~t~~~i 399 (412)
T TIGR02407 320 VQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGDGDLAGKIAKAAFENGLIIETSGPNDEVIKLLPPLTIDEETL 399 (412)
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEEecChHHHHHHHHHHHHCCCEEeccCCCCCEEEEECCCCCCHHHH
Confidence 99999999999999888887 567899999999999943 245788999999999987653 47899999999999999
Q ss_pred HHHHHHHHHHHHH
Q 012368 447 DQAVEILCKTLPV 459 (465)
Q Consensus 447 ~~~l~~l~~~l~~ 459 (465)
++++++|++++++
T Consensus 400 ~~~~~~l~~~l~~ 412 (412)
T TIGR02407 400 QQGLDILEQAVEE 412 (412)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998853
No 58
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=1e-63 Score=500.69 Aligned_cols=395 Identities=20% Similarity=0.306 Sum_probs=334.2
Q ss_pred hccccccchhhhccCCCCCCcchHHHHHHHHhccccccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHH
Q 012368 40 AASVNVEVNDAARGSAGGLGRNNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADW 119 (465)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v 119 (465)
.+|..+ +++|.+++|+|+.+..+.+ ....+.|+++++++|+++||.|||+||||.+++++.+|||+||+|
T Consensus 5 ~~s~~l-~~~a~~~~p~g~~~~~~~~---------~~~~~~p~~i~~a~G~~l~D~dG~~yiD~~~g~~~~~lGh~~p~v 74 (433)
T PRK00615 5 QEMTHT-FSEACQYFPGGVNSPVRAC---------RSVGITPPIVSSASGDIFIDSLGKTFIDFCGSWGSLIHGHSHPKI 74 (433)
T ss_pred HHHHHH-HHHHHhhCCCCcCCCcccc---------cccCCCCceEEEeeeCEEEECCCCEEEEcccchhccccCCCCHHH
Confidence 577788 9999999999998887732 123468999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEc
Q 012368 120 IKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFT 197 (465)
Q Consensus 120 ~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~ 197 (465)
.+|+.+++++... ....++...+|+++|.+..+ .++|+|++||+||++.|+|+||.+|+ |.+||.+.
T Consensus 75 ~~ai~~q~~~~~~--~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tg---------r~~ii~~~ 143 (433)
T PRK00615 75 CDAIQQGAERGTS--YGLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITG---------RSIIIKFL 143 (433)
T ss_pred HHHHHHHHHhCCC--CCCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhC---------CCEEEEEc
Confidence 9999999987543 34567788999999999886 46999999999999999999999985 78999999
Q ss_pred CCcccCc---cccccccCCCCcC--CCC--CCCCCCceEeeCCCHHHHHhhcC--CCCeEEEEEcccCCCCCcccCCHHH
Q 012368 198 NSFHGRT---MGALALTSKEHYR--SPF--EPVMPGVNFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEF 268 (465)
Q Consensus 198 ~~yhg~~---~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~d~~~le~~l~--~~~~a~vi~ep~~~~~G~~~~~~~~ 268 (465)
++|||++ ...++.++..... ..+ .+..+....++++|++++++++. .+++++||+||+++++|.++|+++|
T Consensus 144 ~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~y 223 (433)
T PRK00615 144 GCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGF 223 (433)
T ss_pred CccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHH
Confidence 9999998 4444444322111 111 11123345678899999999985 3579999999999999999999999
Q ss_pred HHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCC---CCcCCC
Q 012368 269 LQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYG---DHGSTF 345 (465)
Q Consensus 269 l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~---~~~~t~ 345 (465)
+++|+++|++||++||+|||++|| |+|.+++++++++.||++|+||++|||+|+|++++++++++.+.+. .+.+||
T Consensus 224 l~~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv~PDi~~~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~T~ 302 (433)
T PRK00615 224 IEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHVKPDITVYGKILGGGLPAAAVVAHKSIMDHLAPEGTIFQAGTL 302 (433)
T ss_pred HHHHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCCCCCeEEEcccccCCcceeeeeecHHHHhhhcCCCCcccCCCC
Confidence 999999999999999999999999 8998888999999999999999999999999999999999988532 367899
Q ss_pred CChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCC-ceeeeccceEEEEEecCC---------------
Q 012368 346 AGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPH-VKDVRGLGLIIGIEFDVS--------------- 409 (465)
Q Consensus 346 ~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~g~~~~i~~~~~--------------- 409 (465)
++||++++|++++|++++++++++++++++++++++|++++.+.+. +..++ .|+++.+++..+
T Consensus 303 ~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~ 381 (433)
T PRK00615 303 SGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEA 381 (433)
T ss_pred cccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-eceEEEEEEeCCCCCChHHHhhCCHHH
Confidence 9999999999999999988889999999999999999998776432 55566 899999999311
Q ss_pred hHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 410 ATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 410 ~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
...+...|+++||++.+...+. ..++..||++|||+++++++++++++
T Consensus 382 ~~~~~~~l~~~Gv~~~~~~~~~---~~ls~~ht~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 382 FQTFYQSAFSKGVYLSPSPFEA---SFLSSAHSMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred HHHHHHHHHHCCeeecCccccc---cceecCCCHHHHHHHHHHHHHHHHHH
Confidence 1257888999999998764322 25678999999999999999999875
No 59
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2.9e-63 Score=501.01 Aligned_cols=376 Identities=34% Similarity=0.548 Sum_probs=328.0
Q ss_pred CCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHhhcC--C
Q 012368 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF--A 155 (465)
Q Consensus 79 ~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~--~ 155 (465)
+.|+++++++|+++||.|||+||||.++++++++||+||+|.+|+.++++++.+... .+.++...+|+++|++..+ .
T Consensus 23 ~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~ 102 (423)
T PRK05964 23 PPPIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGL 102 (423)
T ss_pred CCCeeEEeccccEEEeCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCC
Confidence 358999999999999999999999999999999999999999999999998655433 4567788999999999885 6
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC--C
Q 012368 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY--G 233 (465)
Q Consensus 156 ~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 233 (465)
++++|++||+||++.|+|+||.|+..++.. ++.+||.++++|||++.+++++++...+...+.+...++.++++ +
T Consensus 103 ~~v~f~~sGseA~e~A~klar~~~~~~~~~---~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (423)
T PRK05964 103 DHVFFSDSGSVAVEVALKMALQYWRNRGEP---GRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPD 179 (423)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCC---CCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcc
Confidence 899999999999999999999986433221 47899999999999999999888765555445554455555554 4
Q ss_pred C-----HHHHHhhcC--CCCeEEEEEcc-cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccC
Q 012368 234 N-----IEATRKLIQ--PGKTAAVFVEP-IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYG 305 (465)
Q Consensus 234 d-----~~~le~~l~--~~~~a~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~ 305 (465)
| ++++++++. .+++++||+|| +++++|+.+++++|+++|+++|++||++||+||||+||||+|.++++++++
T Consensus 180 d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~ 259 (423)
T PRK05964 180 GYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAG 259 (423)
T ss_pred hhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcC
Confidence 5 888888885 45799999999 699999999999999999999999999999999999999999988889999
Q ss_pred CcccEEEecccCCCc-cceeeEEeCHHHHhhccCC------CCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 012368 306 IFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYG------DHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYF 378 (465)
Q Consensus 306 ~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~------~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l 378 (465)
+.||++++||+++|| +|+|++++++++++.+... .+++||++||++++|+.++|+.++++++.++++++++++
T Consensus 260 v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l 339 (423)
T PRK05964 260 VSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAALSAGL 339 (423)
T ss_pred CCCCeeeeehhhhcCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 999999999999988 8999999999999987431 467899999999999999999998888999999999999
Q ss_pred HHHHHHHHHcCCCceeeeccceEEEEEecC-C----hHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHH
Q 012368 379 KETLKQKLARNPHVKDVRGLGLIIGIEFDV-S----ATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEIL 453 (465)
Q Consensus 379 ~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~-~----~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l 453 (465)
++.|+++ ..++.+..+++.|+++.+++.. . ...+.+.|+++||++.+.+ +.+||+|++++|++|||+++++|
T Consensus 340 ~~~l~~l-~~~~~i~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~~--~~lR~~p~l~~t~edId~~v~~l 416 (423)
T PRK05964 340 AEGLEPF-RDLPGVADVRVLGAIGAVELDRPVLERDGPALRAFALERGVLLRPLG--NTIYLMPPYIITAEELDRITDAI 416 (423)
T ss_pred HHHHHhh-ccCCCeEEeecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEEecC--CEEEEeCCcccCHHHHHHHHHHH
Confidence 9999887 4577777889999999999842 2 5578899999999998764 68999999999999999999999
Q ss_pred HHHHHHh
Q 012368 454 CKTLPVL 460 (465)
Q Consensus 454 ~~~l~~~ 460 (465)
+++++++
T Consensus 417 ~~al~~~ 423 (423)
T PRK05964 417 VEVADEL 423 (423)
T ss_pred HHHHhhC
Confidence 9999764
No 60
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=3.3e-63 Score=499.71 Aligned_cols=379 Identities=36% Similarity=0.570 Sum_probs=326.7
Q ss_pred ccccC-CCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHh
Q 012368 74 VGTYN-RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVA 151 (465)
Q Consensus 74 ~~~~~-~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~ 151 (465)
.+.|. +.|+++++++|+|+||.|||+||||.+++++.+|||+||+|.+|+.+|+++..+... .+.++...+|+++|++
T Consensus 14 ~~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~ 93 (425)
T PRK09264 14 VRSYCRSFPVVFDKAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEE 93 (425)
T ss_pred HhccCCCCCccEEeeecCEEEeCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHH
Confidence 33443 468999999999999999999999999999999999999999999999987443322 3456778899999998
Q ss_pred hc--C--CC-eEEe-cCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCC
Q 012368 152 CS--F--AD-RVFF-SNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMP 225 (465)
Q Consensus 152 ~~--~--~~-~v~~-~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~ 225 (465)
.. + .+ +++| +|||+||++.|+|+|+.+++ +.+||.++++|||++.+++++++...++..+.+..+
T Consensus 94 ~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~ 164 (425)
T PRK09264 94 TILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTG---------RTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLN 164 (425)
T ss_pred hhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcC---------CCeEEEECCccCCccHHHHHhcCCcccccCCCCCCC
Confidence 64 2 33 6766 58999999999999999974 788999999999999999998876655555555556
Q ss_pred CceEeeCC--------CHHHHHhhcCC-----CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 226 GVNFVEYG--------NIEATRKLIQP-----GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 226 ~~~~~~~~--------d~~~le~~l~~-----~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
++.++|++ |+++++++++. +++++||+||+++++|+++++++||++|+++|++||++||+||||+||
T Consensus 165 ~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~ 244 (425)
T PRK09264 165 NVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGC 244 (425)
T ss_pred CeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCC
Confidence 77777774 77889998852 368999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccccCCcccEEEecccCCC-ccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHH-HHhcCchHHHH
Q 012368 293 GRTGYLWAHEHYGIFPDIMTLAKPLAG-GLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVL-DKISNPAFLAS 370 (465)
Q Consensus 293 gr~g~~~~~~~~~~~pdi~t~sK~lg~-G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L-~~~~~~~~~~~ 370 (465)
||+|.+++++++++.||++|+||++++ |+|+|++++++++. .+....+.+||++||++++++.++| +.++++++.++
T Consensus 245 GrtG~~~~~~~~~v~PDi~t~~K~l~~~G~pigav~~~~~i~-~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~ 323 (425)
T PRK09264 245 GRTGTFFSFERAGITPDIVTLSKSISGYGLPMALVLIKPELD-VWKPGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKE 323 (425)
T ss_pred ccccHHHHHhhcCCCCCEEEeccccCCCccceEEEEEchhhh-ccCCCccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHH
Confidence 999998889999999999999999998 89999999999874 5655567889999999999999999 56666789999
Q ss_pred HHHHHHHHHHHHHHHHHcCCC-ceeeeccceEEEEEecC--ChHHHHHHHHHCCceEeecCC-CCEEEEecCCCCcHHHH
Q 012368 371 VSKKGHYFKETLKQKLARNPH-VKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQEL 446 (465)
Q Consensus 371 ~~~~~~~l~~~l~~~~~~~~~-~~~~~~~g~~~~i~~~~--~~~~~~~~l~~~Gv~v~~~~~-~~~lRi~~~~~~t~e~i 446 (465)
++++++++++.|+++..++|. +..+++.|++++++++. ....+.+.|+++||++.+.+. +..+||+|++++|++++
T Consensus 324 ~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ei 403 (425)
T PRK09264 324 VKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGDGELAGKIAAEAFENGLIIETSGPEDEVVKLLPPLTIDEEEL 403 (425)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecChHHHHHHHHHHHHCCCEEeccCCCCCEEEEeCCCCCCHHHH
Confidence 999999999999998777774 46789999999999942 245788999999999987653 47899999999999999
Q ss_pred HHHHHHHHHHHHHhhh
Q 012368 447 DQAVEILCKTLPVLDS 462 (465)
Q Consensus 447 ~~~l~~l~~~l~~~~~ 462 (465)
++++++|+++++++.+
T Consensus 404 ~~~~~~l~~~l~~~~~ 419 (425)
T PRK09264 404 EEGLDILEEAVAEVLA 419 (425)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999987653
No 61
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=9e-63 Score=493.93 Aligned_cols=379 Identities=48% Similarity=0.816 Sum_probs=336.3
Q ss_pred cCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCC
Q 012368 77 YNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFAD 156 (465)
Q Consensus 77 ~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~ 156 (465)
|.+.|+++++++|+++||.||++||||.++++++++||+||+|.+|+.+++++..+....+.++...+++++|++..+.+
T Consensus 10 ~~~~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~ 89 (389)
T PRK01278 10 YNRADLAFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVENSFAD 89 (389)
T ss_pred cCCCCceEEeeecCEEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccccCChHHHHHHHHHHhhCCCC
Confidence 45678999999999999999999999999999999999999999999999987554444456777899999999988888
Q ss_pred eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHH
Q 012368 157 RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIE 236 (465)
Q Consensus 157 ~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 236 (465)
+|+|++||+||++.|+++++.++...+. +++++||+++++|||++..++..++.+.+...+.+..+++..+|++|++
T Consensus 90 ~v~~~~sGseA~~~al~~ar~~~~~~G~---~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 166 (389)
T PRK01278 90 KVFFTNSGAEAVECAIKTARRYHYGKGH---PERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIE 166 (389)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHHhcCC---CCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHH
Confidence 9999999999999999999987532211 1356899999999999999988887665554455555667778999999
Q ss_pred HHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEeccc
Q 012368 237 ATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKP 316 (465)
Q Consensus 237 ~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~ 316 (465)
++++++++ ++++|++||+++++|..+++++++++|+++|++||++||+||||+|||++|.+++.+++++.||++||||+
T Consensus 167 ~l~~~l~~-~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~ 245 (389)
T PRK01278 167 ALKAAITP-NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMAVAKG 245 (389)
T ss_pred HHHHhhCC-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEEEehh
Confidence 99999975 79999999999999988899999999999999999999999999999999987777788999999999999
Q ss_pred CCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCC-Cceee
Q 012368 317 LAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNP-HVKDV 395 (465)
Q Consensus 317 lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~ 395 (465)
+++|+|+|++++++++++.+....+..||++||++++|+.++|+.++++++.+++++++++++++|+++...++ .+..+
T Consensus 246 l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v 325 (389)
T PRK01278 246 IGGGFPLGACLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEV 325 (389)
T ss_pred ccCCcceEEEEEcHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhCCCceeeE
Confidence 99999999999999999998877788999999999999999999987778889999999999999999877777 67788
Q ss_pred eccceEEEEEecCChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 396 RGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 396 ~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
++.|.++++++..+..++++.|+++||++.|++. +.+||+|+++++++++++++++|+++++++
T Consensus 326 ~g~G~~~~i~~~~~~~~~~~~l~~~GV~~~p~~~-~~lR~~p~~~~~~~~i~~~l~~l~~~l~~~ 389 (389)
T PRK01278 326 RGKGLLLGLKCVVPNRDLVQALRDEGLLTVGAGD-NVVRLLPPLIITEEEIDEALERLERAAESL 389 (389)
T ss_pred ecccEEEEEEEecCHHHHHHHHHHCCeEEeecCC-CEEEEeCCcccCHHHHHHHHHHHHHHHHhC
Confidence 9999999988855678899999999999998765 789999999999999999999999988653
No 62
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=6.7e-63 Score=495.35 Aligned_cols=389 Identities=37% Similarity=0.629 Sum_probs=338.9
Q ss_pred HHHHHHHHhccccccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHH
Q 012368 63 KEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQ 142 (465)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~ 142 (465)
+++++...++..+.|.+.|+++++++|+|+||.|||+||||.+++++.++||+||+|++|+.++++++.+.+....++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~ 84 (396)
T PRK04073 5 EKIIELTNHYGAHNYHPLPIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAFHSDQL 84 (396)
T ss_pred HHHHHHHHHhcccccCCCCceEEeeeecEEEECCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHH
Confidence 34555555555556667899999999999999999999999999999999999999999999999987655445567778
Q ss_pred HHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhc-CCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCC
Q 012368 143 IELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHS-NPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFE 221 (465)
Q Consensus 143 ~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~-~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~ 221 (465)
.+|+++|++..+.++++|++||+||++.|+++++.++... +.. +++++||.++.+|||++..++++++.+.+...+.
T Consensus 85 ~~l~~~l~~~~~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~--~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~ 162 (396)
T PRK04073 85 GPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVE--PNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFG 162 (396)
T ss_pred HHHHHHHHhcCCCCeEEEcCChHHHHHHHHHHHHHHhhhccCCC--CCCCEEEEECCCcCCCCHHHHhhcCCcccccCCC
Confidence 9999999998888899999999999999999999874211 100 1467899999999999999988887666555566
Q ss_pred CCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccc
Q 012368 222 PVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAH 301 (465)
Q Consensus 222 ~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~ 301 (465)
+..+++.++|++|++++++++++ ++++|++||+++++|.+.++++|+++|+++|++||++||+||+|+|||++|..++.
T Consensus 163 ~~~~~~~~~~~~d~~~l~~~i~~-~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~ 241 (396)
T PRK04073 163 PMLPGIKKIPYGDLEALKAAITP-NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFAC 241 (396)
T ss_pred CCCCCceEeCCCCHHHHHHhccc-CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHh
Confidence 76777888999999999999964 68999999999999999999999999999999999999999999999999987777
Q ss_pred cccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Q 012368 302 EHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKE 380 (465)
Q Consensus 302 ~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~ 380 (465)
+.+++.||+++|||++++| +|+|++++++++++.+....+..||++||++++|++++|+.++++++.++++++++++.+
T Consensus 242 ~~~~~~pdi~~~sK~lg~gg~~ig~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~ 321 (396)
T PRK04073 242 DWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLELGEYFKE 321 (396)
T ss_pred hhcCCCCCEEEecccccCCCCcceEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 7889999999999999975 999999999999999877678889999999999999999988777888999999999999
Q ss_pred HHHHHHHcCCCceeeeccceEEEEEecCChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 381 TLKQKLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 381 ~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
.|+++ ..+.+..+++.|+|+++++...+.++.+.|+++||++.+.+. +++||+||+.+|++++++++++|++++
T Consensus 322 ~L~~l--~~~~i~~~~~~g~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 322 QLKEI--DNPMIKEVRGRGLFIGVELNEPARPYCEALKEEGLLCKETHE-TVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred HHHhh--cCCcccceecceEEEEEEecchHHHHHHHHHHCCeEEecCCC-CEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 99885 345566788999999998865677899999999999987654 789999999999999999999999875
No 63
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-62 Score=538.00 Aligned_cols=385 Identities=30% Similarity=0.483 Sum_probs=329.7
Q ss_pred HHHHHHHHhccccccC---CCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCC
Q 012368 63 KEVMEAEKKLLVGTYN---RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYS 139 (465)
Q Consensus 63 ~~~~~~~~~~~~~~~~---~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~ 139 (465)
..+.+.+.++..+.+. +.|+++++|+|+|+||.|||+||||.++. .++||+||+|.+|+.+|++++.. ...+.+
T Consensus 586 ~~~~~~~~~~~~~~~~~~~~~p~~i~~g~G~~l~D~dG~~ylD~~~g~--~~lGH~hp~v~~Ai~~q~~~l~~-~~~~~~ 662 (1013)
T PRK06148 586 AEILRERKEHLLPNLSISYSDPIKFVRGWGVWLIDNRGRAYLDCFNNV--CHVGHAHPRVVAAAARQAARLNT-NTRYLH 662 (1013)
T ss_pred HHHHHHHHHhcCcccccccCCCceEEEeeecEEEECCCCEEEEcccCh--hhcCCCCHHHHHHHHHHHhhcCC-cCCcCC
Confidence 3445555555555544 77999999999999999999999999985 67999999999999999988632 235678
Q ss_pred HHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcC
Q 012368 140 IPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYR 217 (465)
Q Consensus 140 ~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 217 (465)
+...+++++|++.++ .++++|+|||+||++.|+|+|+.+|+ +.+||.++.+|||++.+++++++.. +.
T Consensus 663 ~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~tG---------r~~ii~~~~~YHG~t~~a~s~s~~~-~~ 732 (1013)
T PRK06148 663 DAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHTG---------QRDAIVLDHAYHGTTTELIDLSPYK-FN 732 (1013)
T ss_pred HHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHhcC---------CCeEEEEcCCccCCCcchhhcCchh-hc
Confidence 889999999999886 58999999999999999999999985 7889999999999999998877632 22
Q ss_pred CCCCCC-CCCc--------eEeeCC--C-------HHHHHhhcC-----CCCeEEEEEcccCCCCCcccCCHHHHHHHHH
Q 012368 218 SPFEPV-MPGV--------NFVEYG--N-------IEATRKLIQ-----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRD 274 (465)
Q Consensus 218 ~~~~~~-~~~~--------~~~~~~--d-------~~~le~~l~-----~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~ 274 (465)
.++.+. .+++ ...|++ | .+.++++++ ++++++||+||+++++|+++++++||++|++
T Consensus 733 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~ 812 (1013)
T PRK06148 733 RKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYA 812 (1013)
T ss_pred ccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHH
Confidence 222211 1222 223444 2 134555553 3579999999999999999999999999999
Q ss_pred HHHHhCCEEEEeccccCCCCCCc-cccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCC-CCcCCCCChHHHH
Q 012368 275 ACDDAGALLVFDEVQCGLGRTGY-LWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYG-DHGSTFAGSPLVC 352 (465)
Q Consensus 275 l~~~~g~llI~DEv~~g~gr~g~-~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~-~~~~t~~~~~~~~ 352 (465)
+|++||+++|+|||+|||||+|. +|+++++++.|||+|+||++|||+|+|++++++++++.+.++ .+.+||++||++|
T Consensus 813 lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~lggG~Plgav~~~~ei~~~~~~g~~~~~Tf~gnpla~ 892 (1013)
T PRK06148 813 MVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGNGHPMGAVVTTREIADSFDNGMEYFNTFGGNPVSC 892 (1013)
T ss_pred HHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeecccccCCcceEEEEEcHHHHhhccCCCccccCCCCCHHHH
Confidence 99999999999999999999997 889999999999999999999999999999999999988765 3789999999999
Q ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC------C----hHHHHHHHHHCCc
Q 012368 353 NAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV------S----ATPVVDACRDSGL 422 (465)
Q Consensus 353 ~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~------~----~~~~~~~l~~~Gv 422 (465)
+|++++|++++++++++++++++++|++.|+++.+++|.+..++|.|+|+++++.. . ...+...|+++||
T Consensus 893 aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gv 972 (1013)
T PRK06148 893 AIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGI 972 (1013)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCe
Confidence 99999999999899999999999999999999999999999999999999999831 1 3457888999999
Q ss_pred eEeecCC-CCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 423 LVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 423 ~v~~~~~-~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
++.+.+. ++++||.||+++|++++|+++++|++++.++
T Consensus 973 l~~~~g~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 973 LIGTEGPHDNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred EEeccCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 9987653 5899999999999999999999999999875
No 64
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=4.5e-61 Score=483.19 Aligned_cols=380 Identities=42% Similarity=0.751 Sum_probs=332.9
Q ss_pred ccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCC
Q 012368 76 TYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFA 155 (465)
Q Consensus 76 ~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~ 155 (465)
.|.+.|+++++++|+++||.||++||||++++++.+|||+||+|.+|+.+++++..+....+.++...+++++|++..+.
T Consensus 18 ~~~~~~~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 97 (403)
T PRK05093 18 NYAPAEFIPVRGEGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDATFA 97 (403)
T ss_pred hcCCCCeeEEEeecCEEEeCCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhCCC
Confidence 35678999999999999999999999999999999999999999999999998754433334566788999999998877
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCH
Q 012368 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNI 235 (465)
Q Consensus 156 ~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 235 (465)
++++|++||+|||+.|+++++.++..++. ..+++||.++.+|||++..++++++.+.+...+.+...++.++|++|+
T Consensus 98 ~~~~~~~sGseA~e~a~klar~~~~~~~~---~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 174 (403)
T PRK05093 98 ERVFFANSGAEANEAAFKLARRYACDRHG---PEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDL 174 (403)
T ss_pred CEEEEeCchHHHHHHHHHHHHHHHhhcCC---CCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCH
Confidence 89999999999999999999998742211 147789999999999999887777665544445555567788999999
Q ss_pred HHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecc
Q 012368 236 EATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAK 315 (465)
Q Consensus 236 ~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK 315 (465)
+++++.+.+ ++++|++||+++++|+++++++|+++|+++|++||+++|+||||+|||++|.+++...+++.||+.+|||
T Consensus 175 ~~l~~~l~~-~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~s~sK 253 (403)
T PRK05093 175 AAVKAVIDD-HTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDILTSAK 253 (403)
T ss_pred HHHHHHhcC-CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCEEEecc
Confidence 999999964 6899999999999999889999999999999999999999999999999998777777899999999999
Q ss_pred cCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceee
Q 012368 316 PLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDV 395 (465)
Q Consensus 316 ~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 395 (465)
++++|+|+||+++++++++.+....+..|++++|+.|+++.++|+.+.++++.++++++++++++.|+++...++.+..+
T Consensus 254 ~l~~G~rig~vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 333 (403)
T PRK05093 254 ALGGGFPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQKYGVFSEI 333 (403)
T ss_pred cccCCcceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCeEeE
Confidence 99999999999999999999977667789999999999999999988777889999999999999999876666666788
Q ss_pred eccceEEEEEecC----ChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 396 RGLGLIIGIEFDV----SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 396 ~~~g~~~~i~~~~----~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
++.|.++++.+.. ...+++..|+++||++.+.+. +.+||+|++.+++++|++++++|++++.++
T Consensus 334 ~~~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g~-~~lRl~~~~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 334 RGMGLLIGAELKPQYKGRARDFLNAAAEEGVMVLVAGP-DVLRFAPSLVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred eeCceEEEEEecCcchhHHHHHHHHHHHCCeEEecCCC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 8899999998832 356799999999999998665 789999999999999999999999998754
No 65
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=1.4e-61 Score=485.65 Aligned_cols=389 Identities=26% Similarity=0.395 Sum_probs=311.4
Q ss_pred chHHHHHHHHhccccccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHH--HhhcccccCCCC
Q 012368 61 NNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQ--ANVLTHVSNMYY 138 (465)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~--~~~~~~~~~~~~ 138 (465)
.++.+.++..++......+.|+++++++|+|+||.|||+||||++++++.++||+||+|++|+.++ ...+.+.+ .+.
T Consensus 21 ~s~~l~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~-~~~ 99 (464)
T TIGR00699 21 KSKAAMKQLNEVFDARAVHFLADYEKSRGNYLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRP-ALG 99 (464)
T ss_pred cHHHHHHHHHhhhcccCcccceEEEecccCEEEeCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccc-cCC
Confidence 445555555444322222679999999999999999999999999999999999999999999985 33333322 355
Q ss_pred CHHHHHHHHHHHh----hcC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCC----------------CCCC--CceEE
Q 012368 139 SIPQIELAKRLVA----CSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPD----------------SKEP--ATEFV 194 (465)
Q Consensus 139 ~~~~~~la~~l~~----~~~--~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~----------------~~~~--~~~ii 194 (465)
++...+++++|.+ ..+ .++|+|+|||+||++.|+|+|+.|++..+.. +.++ +.+||
T Consensus 100 ~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii 179 (464)
T TIGR00699 100 NFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSIL 179 (464)
T ss_pred cHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEE
Confidence 6677888888854 443 5899999999999999999999986532100 0011 34899
Q ss_pred EEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC-------------------CCHHHHHhhcC--CCCeEEEEEc
Q 012368 195 SFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-------------------GNIEATRKLIQ--PGKTAAVFVE 253 (465)
Q Consensus 195 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~d~~~le~~l~--~~~~a~vi~e 253 (465)
.+.++|||.+.+++++++...+.....+ ..++.++|+ +++++++++++ .+++++||+|
T Consensus 180 ~~~~syHG~t~~als~t~~~~~~~~~~~-~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~E 258 (464)
T TIGR00699 180 SFKGAFHGRLFGSLSTTRSKPIHKLDIP-AFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVE 258 (464)
T ss_pred EECCCcCCccHHHHHhcCCccccccCCC-CCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEe
Confidence 9999999999999988765432221111 112222222 24667888885 3579999999
Q ss_pred ccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCc--ccEEEecccCC-CccceeeEEeCH
Q 012368 254 PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIF--PDIMTLAKPLA-GGLPIGAALVTE 330 (465)
Q Consensus 254 p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~--pdi~t~sK~lg-~G~~iG~v~~~~ 330 (465)
|+++++|+++++++||++|+++|++||++||+|||++||||+|.+|+++++++. ||++|+||+++ ||+. ++++
T Consensus 259 Pv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~gK~lg~gG~~----~~~~ 334 (464)
T TIGR00699 259 PIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTAGYF----FHDP 334 (464)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEehhhhccCCcc----ccch
Confidence 999999999999999999999999999999999999999999999999999997 99999999996 5653 2332
Q ss_pred HHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCC-Cceeee--ccceEEEEEec
Q 012368 331 KVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNP-HVKDVR--GLGLIIGIEFD 407 (465)
Q Consensus 331 ~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~--~~g~~~~i~~~ 407 (465)
.+....+..+++||++||++|+|+.++|+.++++++.++++++++++++.|+++..++| .+..++ +.|+|+.++++
T Consensus 335 -~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~ 413 (464)
T TIGR00699 335 -AFRPNKPYRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTP 413 (464)
T ss_pred -hccCCCCcccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecC
Confidence 32222334688999999999999999999998899999999999999999999888888 788998 99999999984
Q ss_pred C--ChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 408 V--SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 408 ~--~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
. ....+.+.|+++|+++.+.+. +++||.||+++|++||++++++|++++
T Consensus 414 ~~~~~~~i~~~~~~~Gvl~~~~g~-~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 414 DEAKRDKLLKKARNNGVNIGGCGV-KAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred CHHHHHHHHHHHHHCCcEEecCCC-CeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 2 256788999999999987654 789999999999999999999998764
No 66
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=1.1e-60 Score=483.67 Aligned_cols=394 Identities=25% Similarity=0.394 Sum_probs=331.9
Q ss_pred cccccchhhhccCCCCCCcchHHHHHHHHhccccccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHH
Q 012368 42 SVNVEVNDAARGSAGGLGRNNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIK 121 (465)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~ 121 (465)
|.++ ++++.+.+|||+..+.+.+ ..-.+.|+++++++|+++||.|||+||||.+++++.++||+||+|++
T Consensus 2 s~~~-~~~~~~~~~~g~~~~~~~~---------~~~~~~p~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ 71 (423)
T TIGR00713 2 SENL-FEEAKQVFPGGVNSPVRAF---------KSVGPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVE 71 (423)
T ss_pred cHHH-HHHHHhhCCCCCCCccccc---------ccCCCCCeeEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHH
Confidence 6677 9999999999986544321 01125689999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC-CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCc
Q 012368 122 AVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSF 200 (465)
Q Consensus 122 a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~y 200 (465)
|+.+++++..+ ..++++...+|+++|++.++ .++|+|++||+||++.|+++++.+++ +++||.++++|
T Consensus 72 ai~~q~~~~~~--~~~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~g---------r~~ii~~~~~y 140 (423)
T TIGR00713 72 AVKEALERGTS--YGAPTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTG---------RDKIIKFEGCY 140 (423)
T ss_pred HHHHHHHhCCc--CCCCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhC---------CCEEEEEcCCC
Confidence 99999987543 23466778999999999886 67999999999999999999999874 78999999999
Q ss_pred ccCccccccccCC--CCcCCCCCCC-----CCCceEeeCCCHHHHHhhcC--CCCeEEEEEcccCCCCCcccCCHHHHHH
Q 012368 201 HGRTMGALALTSK--EHYRSPFEPV-----MPGVNFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQF 271 (465)
Q Consensus 201 hg~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~d~~~le~~l~--~~~~a~vi~ep~~~~~G~~~~~~~~l~~ 271 (465)
||++......++. .....++.+. .+....+|++|+++++++++ .+++++||+||+++++|.++++++|+++
T Consensus 141 hG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~ 220 (423)
T TIGR00713 141 HGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAG 220 (423)
T ss_pred CCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHH
Confidence 9998766654322 1111122211 12356678899999999996 2578999999999999988888999999
Q ss_pred HHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccC---CCCcCCCCCh
Q 012368 272 LRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINY---GDHGSTFAGS 348 (465)
Q Consensus 272 l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~---~~~~~t~~~~ 348 (465)
|+++|++||++||+||||+|| |+|..++.+++++.||++||||++++|+|+|++++++++++.+.+ ..+.+||++|
T Consensus 221 l~~l~~~~~~llI~DEv~~g~-r~g~~~~~~~~~~~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~ 299 (423)
T TIGR00713 221 LRALTEEYGSLLIFDEVMTGF-RVALGGAQEYFGVEPDLTTLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTLSGN 299 (423)
T ss_pred HHHHHHHhCCEEEEEcccccc-ccCcchhHHHhCCCcchhhhhhhhcCCCceeeeeEHHHHHHhhCcCCCeeeccCCCCC
Confidence 999999999999999999999 888777777889999999999999999999999999999998863 2467899999
Q ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCC---------------hHHH
Q 012368 349 PLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS---------------ATPV 413 (465)
Q Consensus 349 ~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~---------------~~~~ 413 (465)
|++|+|+.++|+.+++++++++++++++++++.|.+++.+++.+..+++.|+++.+++..+ ...+
T Consensus 300 ~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 379 (423)
T TIGR00713 300 PLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKF 379 (423)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHH
Confidence 9999999999999987789999999999999999998888887778899999999877311 1257
Q ss_pred HHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 414 VDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 414 ~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
.+.|+++||++.+.+. +.+|++|+ +|+++|++++++|+++++++
T Consensus 380 ~~~l~~~Gv~v~~~~~-~~~~l~~~--~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 380 FHEMLDKGVFLPPSQF-EACFLSAA--HTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred HHHHHHCCeEEecCCc-cceeeECC--CCHHHHHHHHHHHHHHHhhC
Confidence 7889999999876544 56888765 79999999999999998753
No 67
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=8.9e-60 Score=470.64 Aligned_cols=370 Identities=46% Similarity=0.775 Sum_probs=328.6
Q ss_pred cCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCC
Q 012368 77 YNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFAD 156 (465)
Q Consensus 77 ~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~ 156 (465)
+.+.|+++++++|+++||.||++||||++++++.+|||+||+|++|+.+++++..+.+..+.++...++++++.+..+.+
T Consensus 8 ~~~~~~~~~~~~G~~~~d~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~ 87 (377)
T PRK02936 8 YGRFPIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNLFTNSLQEEVASLLAENSAGD 87 (377)
T ss_pred ccCCCceEEEeecCEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhcCCCC
Confidence 34678999999999999999999999999999999999999999999999987544334455677889999999887778
Q ss_pred eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHH
Q 012368 157 RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIE 236 (465)
Q Consensus 157 ~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 236 (465)
.++|++||+||++.|+++++.+++ +++||.++++|||++...+.+++...+...+.+..+++.++|++|++
T Consensus 88 ~~~~~~sG~~a~~~A~~~a~~~~g---------~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 158 (377)
T PRK02936 88 LVFFCNSGAEANEAALKLARKHTG---------KSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIK 158 (377)
T ss_pred EEEEeCCcHHHHHHHHHHHHHhcC---------CCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHH
Confidence 999999999999999999987763 77899999999999998888776655555566666777888999999
Q ss_pred HHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEeccc
Q 012368 237 ATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKP 316 (465)
Q Consensus 237 ~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~ 316 (465)
++++.+.+ ++++|++||+++++|..+++++++++|+++|++||+++|+||||+|||++|.+++++.+++.||++|+||+
T Consensus 159 ~l~~~~~~-~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~ 237 (377)
T PRK02936 159 ALKEVMNE-EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIVTVAKG 237 (377)
T ss_pred HHHHhccC-CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEEEEccc
Confidence 99999974 68999999999999998899999999999999999999999999999999987777778899999999999
Q ss_pred CCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeee
Q 012368 317 LAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVR 396 (465)
Q Consensus 317 lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 396 (465)
+++|+|+|++++++++++.+....+..|+++||++++|+.++|+.+..++++++++++++++++.|++.+.+++.+..++
T Consensus 238 l~~G~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~ 317 (377)
T PRK02936 238 LGNGIPVGAMIGKKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNIR 317 (377)
T ss_pred ccCCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEe
Confidence 99999999999999999999776677899999999999999999886678899999999999999998776777777788
Q ss_pred ccceEEEEEecCChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 397 GLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 397 ~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
+.|.++++++......+.+.|.++||++.+.+. +++||+|++.++++++++++++|++++
T Consensus 318 ~~g~~~~i~~~~~~~~~~~~l~~~gv~v~~~g~-~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 318 GKGLMIGIECTEEVAPVIEQLREEGLLVLSAGP-NVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred ecceEEEEEecchHHHHHHHHHHCCeEEecCCC-CEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 899999999855567888999999999998765 789999999999999999999998763
No 68
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=1.7e-60 Score=480.20 Aligned_cols=376 Identities=28% Similarity=0.464 Sum_probs=307.5
Q ss_pred CCceEEEeeeccEEEeC-CCCEEEecccCcccccCCCCCHHHHH--HHHHHHhhccc--cc-CCCCCHHHHHHHHHHHhh
Q 012368 79 RAPVVLASGKGCKLYDA-EGREYLDLSSGIAVNALGHGDADWIK--AVVDQANVLTH--VS-NMYYSIPQIELAKRLVAC 152 (465)
Q Consensus 79 ~~p~~~~~~~G~~~~d~-dG~~ylD~~~~~~~~~lGh~~p~v~~--a~~~~~~~~~~--~~-~~~~~~~~~~la~~l~~~ 152 (465)
|.++.+++++|+|+||. |||+||||.+++++.++||+||+|.+ |+.+|+.+..+ .. ..+.++...+++++|++.
T Consensus 25 p~~~~i~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~ 104 (443)
T PRK08297 25 DLVLDLERSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARV 104 (443)
T ss_pred CcceEEEeccCCEEEECCCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhh
Confidence 34445899999999996 99999999999999999999999999 99999987542 12 235677788999999988
Q ss_pred c-C--CCeEEecCCHHHHHHHHHHHHHHHhhhc----CCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCC-
Q 012368 153 S-F--ADRVFFSNTGTEANEAAIKFARKFQRHS----NPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVM- 224 (465)
Q Consensus 153 ~-~--~~~v~~~~sG~eA~~~al~~a~~~t~~~----~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~- 224 (465)
. + .++|+|+|||+||++.|+|+|+.|+..+ +.+ .+++.+||.+.++|||++.+++++++.......+.+..
T Consensus 105 ~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~-~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~ 183 (443)
T PRK08297 105 LGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGID-PALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFD 183 (443)
T ss_pred cCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCC-CCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCC
Confidence 6 3 6799999999999999999999986321 110 01367899999999999999998876432211111110
Q ss_pred ------CCc------------eEeeCCCHHHHHhhcC--CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEE
Q 012368 225 ------PGV------------NFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLV 284 (465)
Q Consensus 225 ------~~~------------~~~~~~d~~~le~~l~--~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI 284 (465)
+.. ...++++++++++++. ++++++||+||+++++|+++++++|+++|+++|++||++||
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI 263 (443)
T PRK08297 184 WPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLI 263 (443)
T ss_pred ccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 111 0011124566777775 46899999999999999999999999999999999999999
Q ss_pred EeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhh----cc-CCCCcCCCCChHHHHHHHHHHH
Q 012368 285 FDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASA----IN-YGDHGSTFAGSPLVCNAAIAVL 359 (465)
Q Consensus 285 ~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~----~~-~~~~~~t~~~~~~~~~aa~a~L 359 (465)
+|||+|||||+|.+|+++++++.||++|+||+++ +|++++.+++.+. +. ...+++||++||++|+|+.++|
T Consensus 264 ~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~----~~a~l~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L 339 (443)
T PRK08297 264 FDEVQTGVGLTGTAWAYQQLGVRPDIVAFGKKTQ----VCGIMAGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRIL 339 (443)
T ss_pred EechhhccCccchHHHHHhcCCCCCEEEeccccc----ccceecchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHH
Confidence 9999999999999999999999999999999973 4555565554332 21 2358899999999999999999
Q ss_pred HHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCce-eeeccceEEEEEecC--ChHHHHHHHHHCCceEeecCCCCEEEEe
Q 012368 360 DKISNPAFLASVSKKGHYFKETLKQKLARNPHVK-DVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAGKGNVVRLV 436 (465)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~g~~~~i~~~~--~~~~~~~~l~~~Gv~v~~~~~~~~lRi~ 436 (465)
+.+++++++++++++++++++.|+++..++|.+. .+++.|+|+++++.. ....+++.|+++||++.+.+. +.+||+
T Consensus 340 ~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~~~-~~lr~~ 418 (443)
T PRK08297 340 EVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPTTADRDEVIRRLWEEGVLVLPCGE-RSIRFR 418 (443)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEecCHHHHHHHHHHHHHCCEEEecCCC-CeEEEE
Confidence 9998889999999999999999999988888655 899999999999942 245788899999999988765 789999
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 437 PPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 437 ~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
|++++|++|+++++++|+++++++
T Consensus 419 P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 419 PALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred CCccCCHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999765
No 69
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=9.6e-60 Score=473.58 Aligned_cols=373 Identities=31% Similarity=0.502 Sum_probs=317.9
Q ss_pred ceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHhhcC--CCe
Q 012368 81 PVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF--ADR 157 (465)
Q Consensus 81 p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~--~~~ 157 (465)
++.+++++|+++||.||++||||++++++.+|||+||+|.+|+.++++++.+... ...++...+++++|++..+ .++
T Consensus 28 ~~~~~~a~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~ 107 (427)
T TIGR00508 28 VYPVESADGVELTLDDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNALDC 107 (427)
T ss_pred CceEEeeeeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCCCE
Confidence 4668999999999999999999999999999999999999999999998654322 3456778999999999875 589
Q ss_pred EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCC-CcCCCCCCCCCCceEee-----
Q 012368 158 VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE-HYRSPFEPVMPGVNFVE----- 231 (465)
Q Consensus 158 v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----- 231 (465)
|+|++||+||++.|+++++.++..++.+ ++.+||.++.+|||.+.+++++++.. .+...+.+..++..++|
T Consensus 108 v~f~~sGseA~e~AlklAr~~~~~~~~~---~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 184 (427)
T TIGR00508 108 VFLADSGSVAVEVALKMALQYWQAKGEK---NRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNR 184 (427)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhhCCC---CccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCcc
Confidence 9999999999999999999987533221 46789999999999999988876532 12222223223222221
Q ss_pred ----C--CCHHHHHhhcC--CCCeEEEEEccc-CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccccc
Q 012368 232 ----Y--GNIEATRKLIQ--PGKTAAVFVEPI-QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHE 302 (465)
Q Consensus 232 ----~--~d~~~le~~l~--~~~~a~vi~ep~-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~ 302 (465)
+ +|++++++++. .+++++||+||+ ++++|..+++.+||++|+++|++||++||+|||++||||+|.+|+.+
T Consensus 185 ~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~ 264 (427)
T TIGR00508 185 FDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACE 264 (427)
T ss_pred ccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhh
Confidence 1 25778888885 357999999997 99999999999999999999999999999999999999999998999
Q ss_pred ccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccCC-----CCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 012368 303 HYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYG-----DHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGH 376 (465)
Q Consensus 303 ~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~-----~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~ 376 (465)
++++.||++++||+++|| +|++++++++++++.+... .+++||++||+++++++++|++++++++.++++++++
T Consensus 265 ~~~v~pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~~~~~~~~~ 344 (427)
T TIGR00508 265 HAGVVPDILCVGKALTGGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEGEWQKQVSAIEN 344 (427)
T ss_pred hcCCCCCEEEechhhhcCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999999999999999999 5999999999999988642 3778999999999999999999988889999999999
Q ss_pred HHHHHHHHHHHcCCCceeeeccceEEEEEec--CChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHH
Q 012368 377 YFKETLKQKLARNPHVKDVRGLGLIIGIEFD--VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILC 454 (465)
Q Consensus 377 ~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~--~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~ 454 (465)
+|++.|+++ ..++.+..+++.|+++.+++. .....+.+.|+++||++.+.+ +.+|++|++++|++||++++++++
T Consensus 345 ~l~~~L~~l-~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~l~~~ppl~~t~~~id~~~~~l~ 421 (427)
T TIGR00508 345 QLKRELSPL-RKNPVVKDVRVLGAIGVVEMYKPVNVEELQKKFVEQGVWIRPFG--KLIYVMPPYIITTEQLQKLTAALI 421 (427)
T ss_pred HHHHHHHHh-hcCCCEEeEeccccEEEEEECCccCHHHHHHHHHHCCeEEEecC--CEEEEECCCCCCHHHHHHHHHHHH
Confidence 999999986 446667789999999999983 345789999999999998764 689999999999999999999999
Q ss_pred HHHHH
Q 012368 455 KTLPV 459 (465)
Q Consensus 455 ~~l~~ 459 (465)
+++++
T Consensus 422 ~~l~~ 426 (427)
T TIGR00508 422 EALHE 426 (427)
T ss_pred HHHhc
Confidence 99864
No 70
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2.7e-59 Score=470.38 Aligned_cols=376 Identities=46% Similarity=0.745 Sum_probs=330.7
Q ss_pred ccccccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHh
Q 012368 72 LLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVA 151 (465)
Q Consensus 72 ~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~ 151 (465)
+..+.|.+.|+++++++|+++||.||++||||.+++++++|||+||+|.+++.+++++..+....+.++...+|+++|++
T Consensus 17 ~~~~~~~~~~~~~~~~~G~~~~d~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~la~~l~~ 96 (398)
T PRK03244 17 VMMNNYGTPPLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATEPQIALAERLVE 96 (398)
T ss_pred HhhhhccCCCceEEEeeecEEEECCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCCHHHHHHHHHHHH
Confidence 33444556789999999999999999999999999999999999999999999999886544445667778899999999
Q ss_pred hcC---CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCce
Q 012368 152 CSF---ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVN 228 (465)
Q Consensus 152 ~~~---~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (465)
.++ .++++|++||+||++.|+++++.. ++++||.++++|||++..++.+++...+...+.+...++.
T Consensus 97 ~~~~~~~~~v~~~~sgsea~~~al~~~~~~----------g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (398)
T PRK03244 97 LLGAPEGGRVFFCNSGAEANEAAFKLARLT----------GRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVE 166 (398)
T ss_pred hCCCCCCCEEEEeCchHHHHHHHHHHHHHH----------CCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCce
Confidence 876 369999999999999999998863 3678999999999999988877765544445555556778
Q ss_pred EeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcc
Q 012368 229 FVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFP 308 (465)
Q Consensus 229 ~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~p 308 (465)
.+|++|++++++++. +++++|++||+++++|.++++++|+++|+++|++||++||+||+|+||||+|.+++++++++.|
T Consensus 167 ~~~~~d~~~l~~~~~-~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~p 245 (398)
T PRK03244 167 HVPYGDVDALAAAVD-DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTP 245 (398)
T ss_pred EeCCCCHHHHHHhhc-CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCC
Confidence 889999999999995 4789999999999999999999999999999999999999999999999999877777889999
Q ss_pred cEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHc
Q 012368 309 DIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLAR 388 (465)
Q Consensus 309 di~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 388 (465)
|++||||++++|+|+|++++++++++.+....+..||++||++++++.++|+.+.++++.++++++++++++.|+++ .
T Consensus 246 Di~t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~--~ 323 (398)
T PRK03244 246 DVVTLAKGLGGGLPIGACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEAL--G 323 (398)
T ss_pred CEEEEchhhhCCcccEEEEEcHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhc--C
Confidence 99999999999999999999999999887667888999999999999999998877889999999999999999875 4
Q ss_pred CCCceeeeccceEEEEEec-CChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 389 NPHVKDVRGLGLIIGIEFD-VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 389 ~~~~~~~~~~g~~~~i~~~-~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
++.+..+++.|++++++++ ..+.++.+.|+++||++.+.+. +++||+|++.++++|+++++++|++++.+++
T Consensus 324 ~~~~~~v~g~g~~~~i~~~~~~~~~~~~~l~~~Gv~~~~~~~-~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 324 HPLVDHVRGRGLLLGIVLTAPVAKAVEAAAREAGFLVNAVAP-DVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred CCceeeEeeccEEEEEEEeccHHHHHHHHHHHCCeEEeecCC-CEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 5666778899999999984 2456799999999999988654 8899999999999999999999999998764
No 71
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-59 Score=514.10 Aligned_cols=387 Identities=27% Similarity=0.462 Sum_probs=323.2
Q ss_pred chHHHHHHHHhcccc---ccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCC
Q 012368 61 NNKEVMEAEKKLLVG---TYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMY 137 (465)
Q Consensus 61 ~~~~~~~~~~~~~~~---~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~ 137 (465)
...++.++..++... .|.+.|+++++++|+|+||.|||+||||.+++. ++||+||+|.+|+.+|+.++.+. ..+
T Consensus 545 ~~~~l~~~~~~~~~~~~~~~~~~p~~i~~g~G~~l~D~dG~~ylD~~~~~~--~lGh~hp~v~~Ai~~q~~~l~~~-~~~ 621 (972)
T PRK06149 545 DAAALLARRDASFARVQKHYYADPPQIERGWRHHLFDMAGRSYLDMVNNVT--VLGHGHPRLAAAAARQWSLLNTN-SRF 621 (972)
T ss_pred CHHHHHHHHHHhhccchhhcccCCCeEEEeeeeEEEeCCCCEEEECCCCcc--ccCCCCHHHHHHHHHHHHhcccc-ccc
Confidence 455666666555444 234568899999999999999999999999864 79999999999999999886443 235
Q ss_pred CCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCC
Q 012368 138 YSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEH 215 (465)
Q Consensus 138 ~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~ 215 (465)
.++...+|+++|++..+ .++++|+|||+|||+.|+|+|+.+|+ +.+||.++.+|||++.++.++++...
T Consensus 622 ~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tg---------r~~ii~~~~~yHG~t~ga~~~s~~~~ 692 (972)
T PRK06149 622 HYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAASG---------RRDVVSVLEAYHGWTVATDAVSTSIA 692 (972)
T ss_pred cCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHhcC---------CCeEEEEeCCCCCcChhHhhhcCCcc
Confidence 56778999999999884 68999999999999999999999985 78899999999999988876653211
Q ss_pred cCCCC-CCCCCCce--------EeeCC--C-----HHHHHhhcC-----CCCeEEEEEcccCCCCCcccCCHHHHHHHHH
Q 012368 216 YRSPF-EPVMPGVN--------FVEYG--N-----IEATRKLIQ-----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRD 274 (465)
Q Consensus 216 ~~~~~-~~~~~~~~--------~~~~~--d-----~~~le~~l~-----~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~ 274 (465)
..... .+...++. ..+++ | .+++++.++ .+++++||+||+++++|+++++++||++|++
T Consensus 693 ~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~ 772 (972)
T PRK06149 693 DNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYA 772 (972)
T ss_pred ccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHH
Confidence 11110 11111111 11232 2 234443332 4579999999999999999999999999999
Q ss_pred HHHHhCCEEEEeccccCCCCCCc-cccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccC-CCCcCCCCChHHHH
Q 012368 275 ACDDAGALLVFDEVQCGLGRTGY-LWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINY-GDHGSTFAGSPLVC 352 (465)
Q Consensus 275 l~~~~g~llI~DEv~~g~gr~g~-~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~-~~~~~t~~~~~~~~ 352 (465)
+|++||+++|+|||+|||||+|. +|+++++|+.|||+|+||++|||+|+|++++++++++.+.. ..+.+|+++||++|
T Consensus 773 lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~gK~lg~G~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~ 852 (972)
T PRK06149 773 AVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGNGHPLGAVITRREIAEALEAEGYFFSSTGGSPVSC 852 (972)
T ss_pred HHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEecccccCCeeeEEEEEcHHHHhhhccCCcccCCCCCCHHHH
Confidence 99999999999999999999997 67899999999999999999999999999999999998864 34567889999999
Q ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC----------ChHHHHHHHHHCCc
Q 012368 353 NAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV----------SATPVVDACRDSGL 422 (465)
Q Consensus 353 ~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~----------~~~~~~~~l~~~Gv 422 (465)
+|++++|++++++++.+++++++++++++|+++..++|.+..++|.|+|+++++.. ....+++.|+++||
T Consensus 853 aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gv 932 (972)
T PRK06149 853 RIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGV 932 (972)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCe
Confidence 99999999999899999999999999999999988899999999999999999821 13468889999999
Q ss_pred eEeecCC-CCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 423 LVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 423 ~v~~~~~-~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
++.+.+. ++++||.||+++|++++++++++|++++.+
T Consensus 933 l~~~~g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 933 IMQPTGDHLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred EEeecCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 9988764 478999999999999999999999999875
No 72
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2.2e-58 Score=463.92 Aligned_cols=386 Identities=51% Similarity=0.858 Sum_probs=338.6
Q ss_pred HHhccccccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHH
Q 012368 69 EKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKR 148 (465)
Q Consensus 69 ~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~ 148 (465)
...+..+.|.+.|+++++++|+++||.||++||||.++++++++||+||+|.+++.+++++..+....++++...+++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~G~~~~d~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~ 89 (396)
T PRK02627 10 EKKYLMNTYGRLPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYYIEPQEELAEK 89 (396)
T ss_pred HHHhhcccccCCCceEEeeeeCEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHH
Confidence 33445566777899999999999999999999999999999999999999999999999876544445677889999999
Q ss_pred HHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCce
Q 012368 149 LVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVN 228 (465)
Q Consensus 149 l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (465)
|++..+.+++++++||+||+++|+++++.+++..+. ++++|+.++++|||++...+..++...+...+.+...++.
T Consensus 90 l~~~~~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~----~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (396)
T PRK02627 90 LVELSGMDKVFFCNSGAEANEAAIKLARKYGHKKGI----EKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFI 165 (396)
T ss_pred HHhhcCCCEEEECCCcHHHHHHHHHHHHHHhcccCC----CCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCce
Confidence 999888899999999999999999999987752211 1378999999999999988887765554444555556777
Q ss_pred EeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcc
Q 012368 229 FVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFP 308 (465)
Q Consensus 229 ~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~p 308 (465)
.++++|++++++++. +++++|++||+++++|+.+++++++++|+++|++||++||+||+|+|||++|.+++++.+++.|
T Consensus 166 ~~~~~d~~~l~~~i~-~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~p 244 (396)
T PRK02627 166 YVPFNDIEALKAAIT-DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEP 244 (396)
T ss_pred EeCCCCHHHHHHhcC-CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCC
Confidence 788999999999996 4789999999999999888899999999999999999999999999999999877777789999
Q ss_pred cEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHc
Q 012368 309 DIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLAR 388 (465)
Q Consensus 309 di~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 388 (465)
|+++|||++++|+|+||+++++++++.+....+..|+++|+++++++.++|+.++++++.++++++++++++.|.++...
T Consensus 245 di~t~sK~~~~G~rig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 324 (396)
T PRK02627 245 DIMTLAKGLGGGVPIGAVLAKEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEK 324 (396)
T ss_pred CEEEEcchhhCCcccEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999987666888999999999999999998877788999999999999999998777
Q ss_pred CCCceeeeccceEEEEEecCChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 389 NPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 389 ~~~~~~~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
++.+..+++.|++++++++.+..++++.|+++||++.+++. +++||+|++.++++++++++++|+++++++
T Consensus 325 ~~~~~~~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~-~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 325 YPGIKEVRGLGLMIGIELDRPAAEIVKKALEKGLLINVTGD-NVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred CCCeeeeccCcEEEEEEecCcHHHHHHHHHHCCeEEeecCC-CEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence 77667788899999998855678899999999999998765 789999999999999999999999998764
No 73
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=4.8e-59 Score=469.99 Aligned_cols=395 Identities=26% Similarity=0.412 Sum_probs=334.8
Q ss_pred ccccccchhhhccCCCCCCcchHHHHHHHHhccccccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHH
Q 012368 41 ASVNVEVNDAARGSAGGLGRNNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWI 120 (465)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~ 120 (465)
.|++| ++++++.+|||.+.+... ..++.+.|+++++++|+++||.||++||||.+++++.++||+||+|+
T Consensus 3 ~~~~~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~a~G~~l~d~dG~~~lD~~~g~~~~~lGh~~p~i~ 72 (426)
T PRK00062 3 KSEEL-FERAKKLIPGGVNSPVRA---------FKSVGGTPRFIERAKGAYLYDVDGNEYIDYVGSWGPMILGHAHPEVV 72 (426)
T ss_pred hhHHH-HHHHHHhCCCCcCCcccc---------cCCCCCCCeEEEeCcCCEEEeCCCCEEEEcccchhhhhcCCCCHHHH
Confidence 56778 999999999997655432 23455678999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC-CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCC
Q 012368 121 KAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNS 199 (465)
Q Consensus 121 ~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~ 199 (465)
+|+.+++++... ..+.++...+|+++|++..+ .++|+|++||+||++.|+++++.+++ +++||.++++
T Consensus 73 ~a~~~~~~~~~~--~~~~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~~g---------~~~ii~~~~~ 141 (426)
T PRK00062 73 EAVIEAAEKGLS--FGAPTELEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGYTG---------RDKIIKFEGC 141 (426)
T ss_pred HHHHHHHHhCCc--CCCCCHHHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHHhC---------CCeEEEEcCc
Confidence 999999987432 34567778899999998874 78999999999999999999998874 7899999999
Q ss_pred cccCccccccccCCCC--cCCCCCC-----CCCCceEeeCCCHHHHHhhcC--CCCeEEEEEcccCCCCCcccCCHHHHH
Q 012368 200 FHGRTMGALALTSKEH--YRSPFEP-----VMPGVNFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQ 270 (465)
Q Consensus 200 yhg~~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~~~d~~~le~~l~--~~~~a~vi~ep~~~~~G~~~~~~~~l~ 270 (465)
|||++.++...++... ...++.+ ..++...+|++|++++++.+. .+++++||+||+++++|.++++++|++
T Consensus 142 yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~ 221 (426)
T PRK00062 142 YHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLE 221 (426)
T ss_pred cCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHH
Confidence 9999976665533211 1111111 112345678899999999885 357999999999999999999999999
Q ss_pred HHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccC---CCCcCCCCC
Q 012368 271 FLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINY---GDHGSTFAG 347 (465)
Q Consensus 271 ~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~---~~~~~t~~~ 347 (465)
+|+++|++||+++|+||||+|| |+|.+++.+++++.||++++||++++|+|+|++++++++++.+.. ..+.+|+++
T Consensus 222 ~l~~l~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~~pDi~~~gK~l~~G~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~ 300 (426)
T PRK00062 222 GLRELCDEHGALLIFDEVMTGF-RVALGGAQGYYGVTPDLTTLGKIIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLSG 300 (426)
T ss_pred HHHHHHHHcCCEEEEeechhcc-ccCCccHHHHhCCCcchHhhhhHhhCCCcceeeeEHHHHHHhhccCCCceecccCcC
Confidence 9999999999999999999999 888777788889999999999999999999999999999998853 246678999
Q ss_pred hHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCC---------------hHH
Q 012368 348 SPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS---------------ATP 412 (465)
Q Consensus 348 ~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~---------------~~~ 412 (465)
||++++|+.++|+.+++++++++++++++++++.|+++..+++.+..+++.|+|+.+++..+ ...
T Consensus 301 ~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~ 380 (426)
T PRK00062 301 NPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFAR 380 (426)
T ss_pred CHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHH
Confidence 99999999999999988889999999999999999998888888888999999999988311 246
Q ss_pred HHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 413 VVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 413 ~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
+...|+++||++.+.+. +.+++ ++++|++|+++++++|+++++++
T Consensus 381 i~~~l~~~Gv~v~~~~~-~~~~~--~~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 381 FFHAMLDEGVYLAPSQF-EAGFV--SAAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred HHHHHHHCCeEeecCCc-Cceee--eccCCHHHHHHHHHHHHHHHHhh
Confidence 88899999999988654 45665 57999999999999999998764
No 74
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=3.7e-58 Score=461.97 Aligned_cols=390 Identities=36% Similarity=0.606 Sum_probs=333.1
Q ss_pred HHHHHHHhccccccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHH
Q 012368 64 EVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQI 143 (465)
Q Consensus 64 ~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~ 143 (465)
.++++..++....+.+.|+++++++|+++||.||++||||.+++++.++||+||+|.+|+.+++++..+.+..+.++...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~ 82 (401)
T TIGR01885 3 EAIERENKYGAHNYHPLPVVFSKAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAFYNDVFG 82 (401)
T ss_pred hHHHHHHHhhhcccCCCCceEEeeecCEEEeCCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHH
Confidence 34445555555566677889999999999999999999999999999999999999999999998866544444677789
Q ss_pred HHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCC
Q 012368 144 ELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPV 223 (465)
Q Consensus 144 ~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 223 (465)
+++++|++.++.++++|++||+|||+.|+++++.++..... ..+++++|+.++.+|||++...+++++.+.+...+.+.
T Consensus 83 ~l~~~l~~~~~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~-~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 161 (401)
T TIGR01885 83 EFAEYVTKLFGYDKVLPMNTGAEAVETAIKLARKWGYKVKG-IPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPY 161 (401)
T ss_pred HHHHHHHhhcCCCEEEEeCccHHHHHHHHHHHHHHhhhhcC-CCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCC
Confidence 99999999998889999999999999999999987532100 00146789999999999999988887655444444455
Q ss_pred CCCceEeeCCCHHHHHhhcC--CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccc
Q 012368 224 MPGVNFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAH 301 (465)
Q Consensus 224 ~~~~~~~~~~d~~~le~~l~--~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~ 301 (465)
.+++..+|++|+++|+++++ +.++++|++||+++++|.+.++++|+++|+++|++||+++|+||||+|||++|.+++.
T Consensus 162 ~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~ 241 (401)
T TIGR01885 162 VPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCV 241 (401)
T ss_pred CCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHH
Confidence 56678889999999999986 3578999999999999999989999999999999999999999999999999988777
Q ss_pred cccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Q 012368 302 EHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKE 380 (465)
Q Consensus 302 ~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~ 380 (465)
+.+++.||++++||++++| +|+|++++++++++.+....+..|++++|++++++.++|+.++++++.++++++++++++
T Consensus 242 ~~~~~~~di~~~gK~l~~g~~~ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~ 321 (401)
T TIGR01885 242 DHENVKPDIVLLGKALSGGVYPVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEEKLAENAEKLGEIFRD 321 (401)
T ss_pred hhcCCCCCEEEeeccccCCCCCcEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 7788999999999999976 899999999999998876567789999999999999999998777888899999999999
Q ss_pred HHHHHHHcCCCceeeeccceEEEEEecC-----ChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHH
Q 012368 381 TLKQKLARNPHVKDVRGLGLIIGIEFDV-----SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCK 455 (465)
Q Consensus 381 ~l~~~~~~~~~~~~~~~~g~~~~i~~~~-----~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~ 455 (465)
.|+++ ..+.+..+++.|+++.+.++. ...++++.|.++||++.+.+. +.+||+|++.+|+++|++++++|++
T Consensus 322 ~L~~l--~~~~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~~~~-~~lRi~p~l~~t~~~i~~~l~~l~~ 398 (401)
T TIGR01885 322 QLKKL--PKPIITEVRGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKPTHG-NIIRLAPPLVITEEQLDEGLEIIKK 398 (401)
T ss_pred HHHhc--cCCceeEEeecCeeEEEEeccCcchhHHHHHHHHHHhCCEEEEecCC-CEEEEeCCccCCHHHHHHHHHHHHH
Confidence 99876 345666788999999988842 356789999999999988764 7899999999999999999999998
Q ss_pred HH
Q 012368 456 TL 457 (465)
Q Consensus 456 ~l 457 (465)
++
T Consensus 399 ~l 400 (401)
T TIGR01885 399 VI 400 (401)
T ss_pred Hh
Confidence 76
No 75
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=1.2e-59 Score=459.58 Aligned_cols=321 Identities=45% Similarity=0.755 Sum_probs=284.6
Q ss_pred EEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhccccc-CCCCCHHHHHHHHHHHhhcC--CCeEE
Q 012368 83 VLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS-NMYYSIPQIELAKRLVACSF--ADRVF 159 (465)
Q Consensus 83 ~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~--~~~v~ 159 (465)
+++|++|+|+||.||++||||++++++.+|||+||+|.+|+.+++.+..+.. ..+.++...+|+++|.+..+ .++++
T Consensus 1 ~i~~a~G~~l~d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~ 80 (339)
T PF00202_consen 1 FIERAEGAYLWDVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLDRVF 80 (339)
T ss_dssp EEEEEEBTEEEETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEE
T ss_pred CeEEeecCEEEECCCCEEEECCCCccceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccccceee
Confidence 5789999999999999999999999999999999999999999999876654 45667789999999999994 88999
Q ss_pred ecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHH--
Q 012368 160 FSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEA-- 237 (465)
Q Consensus 160 ~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-- 237 (465)
|++||+||++.|+|+++.+...... +++.+|+.++++|||.+.+++++++.+.++..+.+...++..+|++++..
T Consensus 81 f~~sGseAve~Alkla~~~~~~~~~---~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 157 (339)
T PF00202_consen 81 FANSGSEAVEAALKLARQYHNKRAY---TGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADE 157 (339)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHTHH---HTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHH
T ss_pred eccCchHHHHHHHHHhhcccccccc---cCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhh
Confidence 9999999999999999932211111 14889999999999999999998887777777777778888999998766
Q ss_pred --------HHhhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCC
Q 012368 238 --------TRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGI 306 (465)
Q Consensus 238 --------le~~l~---~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~ 306 (465)
+++.+. .+++++||+||+++++|.++++++|+++|+++|++||++||+|||++||||+|++|+++++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv 237 (339)
T PF00202_consen 158 EEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGV 237 (339)
T ss_dssp HHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTS
T ss_pred hHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccc
Confidence 333332 568999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Q 012368 307 FPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKL 386 (465)
Q Consensus 307 ~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~ 386 (465)
.||++|+||+++||+|+|++++++++++.+.+..+++||++||++|+++.++|+.++++++++++++.++++++.|+++.
T Consensus 238 ~PDiv~~gK~l~gG~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l~ 317 (339)
T PF00202_consen 238 DPDIVTFGKGLGGGLPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLREGLRELA 317 (339)
T ss_dssp SSSEEEEEGGGGTTSSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcccccccchhhhhhcccccccchhhccccccccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988789999999999999999999999999999999999999999999998
Q ss_pred HcCCCceeeeccceEEEEEe
Q 012368 387 ARNPHVKDVRGLGLIIGIEF 406 (465)
Q Consensus 387 ~~~~~~~~~~~~g~~~~i~~ 406 (465)
++++.+..+++.|+|+++++
T Consensus 318 ~~~~~i~~vrg~Gl~~~ie~ 337 (339)
T PF00202_consen 318 ARYPLIGEVRGIGLMIGIEL 337 (339)
T ss_dssp HHTTTEEEEEEETTEEEEEE
T ss_pred HhCCCeEEEeeeCeEEEEEE
Confidence 88899999999999999987
No 76
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=9.6e-58 Score=461.07 Aligned_cols=373 Identities=36% Similarity=0.609 Sum_probs=322.3
Q ss_pred CCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHhhcC---
Q 012368 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF--- 154 (465)
Q Consensus 79 ~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~--- 154 (465)
+.|+++++++|+++||+||++||||.+++++.++||+||+|.+++.+++++..+... .+.++...+|+++|++..+
T Consensus 22 ~~p~~~~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~ 101 (425)
T PRK08088 22 IHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEKMNQKVPGDF 101 (425)
T ss_pred CCCceEEeeeeCEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCC
Confidence 358999999999999999999999999999999999999999999999998654322 2335678899999999775
Q ss_pred CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCC-CcCCCCCCCCCCceEeeC-
Q 012368 155 ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE-HYRSPFEPVMPGVNFVEY- 232 (465)
Q Consensus 155 ~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~- 232 (465)
.++++|++||+||++.|+++++.+++ +.+||.++++|||.+.+++++++.. .+...+.+...++...++
T Consensus 102 ~~~~~f~~sGsea~e~Alklar~~~~---------r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 172 (425)
T PRK08088 102 AKKTLLVTTGSEAVENAVKIARAATK---------RSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYP 172 (425)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHhC---------CCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCC
Confidence 36999999999999999999999874 6789999999999999998877542 233334333444433322
Q ss_pred ---CC------HHHHHhhcC----CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccc
Q 012368 233 ---GN------IEATRKLIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW 299 (465)
Q Consensus 233 ---~d------~~~le~~l~----~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~ 299 (465)
++ +++|+++++ ++++++||+||+++++|.++++++++++|+++|++||+++|+||+|+|+|++|.++
T Consensus 173 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~ 252 (425)
T PRK08088 173 CPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLF 252 (425)
T ss_pred ccccCccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh
Confidence 21 567888885 46799999999999999999999999999999999999999999999999999877
Q ss_pred cccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 012368 300 AHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFK 379 (465)
Q Consensus 300 ~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~ 379 (465)
+++.+++.||+.+|||++++|+|+||+++++++++.+....+..|++++|++++++.++|+.+..+++.+++++.+++++
T Consensus 253 ~~~~~~~~pdi~s~sK~l~~G~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 332 (425)
T PRK08088 253 AMEQMGVAADLTTFAKSIAGGFPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLK 332 (425)
T ss_pred HHhhcCCCCCEEEEeccccCCCcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 77788999999999999999999999999999999998777889999999999999999999877899999999999999
Q ss_pred HHHHHHHHcCCCceeeeccceEEEEEec--C--------ChHHHHHHHHHCCceEeecCC-CCEEEEecCCCCcHHHHHH
Q 012368 380 ETLKQKLARNPHVKDVRGLGLIIGIEFD--V--------SATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQ 448 (465)
Q Consensus 380 ~~l~~~~~~~~~~~~~~~~g~~~~i~~~--~--------~~~~~~~~l~~~Gv~v~~~~~-~~~lRi~~~~~~t~e~i~~ 448 (465)
+.|.++...+|.+..+++.|+++|+++. . ...++...|+++||++.+.+. ++.+||+|++.+++++|++
T Consensus 333 ~~l~~l~~~~~~~~~v~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~~~~iRl~~~~~~t~~ei~~ 412 (425)
T PRK08088 333 DGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQ 412 (425)
T ss_pred HHHHHHHHhCCCeEEEeccceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCCcCHHHHHH
Confidence 9999998888887889999999999982 1 146788899999998877543 5889999999999999999
Q ss_pred HHHHHHHHHHHh
Q 012368 449 AVEILCKTLPVL 460 (465)
Q Consensus 449 ~l~~l~~~l~~~ 460 (465)
++++|.+++.++
T Consensus 413 ~i~~l~~~l~~~ 424 (425)
T PRK08088 413 GLEIIAQCFDEA 424 (425)
T ss_pred HHHHHHHHHHhh
Confidence 999999998764
No 77
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=6.9e-59 Score=468.36 Aligned_cols=371 Identities=27% Similarity=0.417 Sum_probs=301.1
Q ss_pred CCceEEEeeeccEEEeC-CCCEEEecccCcccccCCCCCHHHH--HHHHHHHhhccc---ccCCCCCHHHHHHHHHHHhh
Q 012368 79 RAPVVLASGKGCKLYDA-EGREYLDLSSGIAVNALGHGDADWI--KAVVDQANVLTH---VSNMYYSIPQIELAKRLVAC 152 (465)
Q Consensus 79 ~~p~~~~~~~G~~~~d~-dG~~ylD~~~~~~~~~lGh~~p~v~--~a~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~ 152 (465)
|.++.+++++|+|+||. |||+||||.+++++.++||+||+|. +|+.+++++..+ ....+.++...+++++|++.
T Consensus 18 p~~~~~~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 97 (431)
T TIGR03251 18 DLVLDLDRSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARV 97 (431)
T ss_pred ceeeEEEeccCCEEEECCCCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHh
Confidence 34444699999999996 9999999999999999999999999 999999987532 11234566788899999887
Q ss_pred c-C--CCeEEecCCHHHHHHHHHHHHHHHhhhc----CCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCC
Q 012368 153 S-F--ADRVFFSNTGTEANEAAIKFARKFQRHS----NPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMP 225 (465)
Q Consensus 153 ~-~--~~~v~~~~sG~eA~~~al~~a~~~t~~~----~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~ 225 (465)
. + .++++|+|||+||++.|+|+|+.||+.. +.+ .+++.+||.++++|||.+.+++++++...+...+.+...
T Consensus 98 ~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~-~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~ 176 (431)
T TIGR03251 98 LGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIP-AALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFD 176 (431)
T ss_pred cCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCC-CCCCceEEEECCccCCcchhhhhccCCccccccCCCCCC
Confidence 5 2 6899999999999999999999997421 110 002578999999999999999988765333322222110
Q ss_pred C----c--eEee-------------CCCHHHHHhhcC--CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEE
Q 012368 226 G----V--NFVE-------------YGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLV 284 (465)
Q Consensus 226 ~----~--~~~~-------------~~d~~~le~~l~--~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI 284 (465)
. . ...| +++++++++.+. ++++++||+||+++++|+++++++|+++|+++|++||++||
T Consensus 177 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI 256 (431)
T TIGR03251 177 WPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLI 256 (431)
T ss_pred CccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 0 0 0011 124566666774 46899999999999999999999999999999999999999
Q ss_pred EeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHH---Hhh-cc-CCCCcCCCCChHHHHHHHHHHH
Q 012368 285 FDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKV---ASA-IN-YGDHGSTFAGSPLVCNAAIAVL 359 (465)
Q Consensus 285 ~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i---~~~-~~-~~~~~~t~~~~~~~~~aa~a~L 359 (465)
+||||+||||+|.+|+++++++.||++++||++ ++++++..+++ ++. +. +..+.+||++||++++|+.++|
T Consensus 257 ~DEV~tG~GrtG~~~a~~~~gv~PDi~~~gK~~----~~~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L 332 (431)
T TIGR03251 257 FDEVQTGVGLTGTAWAYQQLGVQPDIVAFGKKT----QVCGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRIL 332 (431)
T ss_pred EecchhccCccchHHHHHhcCCCCCEEEecccC----ccceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999997 44555555543 321 21 2347889999999999999999
Q ss_pred HHhcCchHHHHHHHHHHHHHHHHHHHHHcCC-CceeeeccceEEEEEecC--ChHHHHHHHHHCCceEeecCCCCEEEEe
Q 012368 360 DKISNPAFLASVSKKGHYFKETLKQKLARNP-HVKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAGKGNVVRLV 436 (465)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~g~~~~i~~~~--~~~~~~~~l~~~Gv~v~~~~~~~~lRi~ 436 (465)
+.++++++.++++++++++++.|+++..+++ .+..+++.|+++.+++.. ....+.+.|+++||++.+.+. +.+||+
T Consensus 333 ~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~g~-~~lr~~ 411 (431)
T TIGR03251 333 EIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTADRDEVIRQLYREGVLLLGCGE-RSIRFR 411 (431)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCHHHHHHHHHHHHhCCeEEecCCC-CeEEEE
Confidence 9998888999999999999999999887888 788899999999999842 234688999999999988764 789999
Q ss_pred cCCCCcHHHHHHHHHHHHH
Q 012368 437 PPLIISEQELDQAVEILCK 455 (465)
Q Consensus 437 ~~~~~t~e~i~~~l~~l~~ 455 (465)
|++.+|++||++++++|++
T Consensus 412 P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 412 PPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred CCccCCHHHHHHHHHHHHh
Confidence 9999999999999999875
No 78
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=4.4e-58 Score=484.39 Aligned_cols=394 Identities=26% Similarity=0.360 Sum_probs=318.2
Q ss_pred hHHHHHHHHhccccccCC-------CceEEEeeecc----EEEeCCCC----EEEecccCcccccCC-CCCHHHHHHHHH
Q 012368 62 NKEVMEAEKKLLVGTYNR-------APVVLASGKGC----KLYDAEGR----EYLDLSSGIAVNALG-HGDADWIKAVVD 125 (465)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~-------~p~~~~~~~G~----~~~d~dG~----~ylD~~~~~~~~~lG-h~~p~v~~a~~~ 125 (465)
.++..++..++.|++|.. .|.+|++++|. |++|.||+ +|||++++++++++| |+||+|.+|+.+
T Consensus 314 ~~~~~~~a~~~iw~Pftq~~~~~~~~~~vi~~a~G~~~~~~~~d~~G~~~~~~ylD~~sg~w~~~lG~h~~p~I~~Ai~~ 393 (817)
T PLN02974 314 LQSMPKEAGEVLWWPFTQHALVPRDSVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWWTQGPDPTLQPELARAVAY 393 (817)
T ss_pred HHHHHHHHhhhccCCcccccccCCCCceEEEeeecCceeEEEECCCCCcccceEEEcchhHHHhCCCcCCCHHHHHHHHH
Confidence 334455556777776653 36788999998 99999998 999999999999999 589999999999
Q ss_pred HHhhcccccC-CCCCHHHHHHHHHHHhhcC---CCeEEecCCHHHHHHHHHHHHHH-HhhhcCCCCC---------CCCc
Q 012368 126 QANVLTHVSN-MYYSIPQIELAKRLVACSF---ADRVFFSNTGTEANEAAIKFARK-FQRHSNPDSK---------EPAT 191 (465)
Q Consensus 126 ~~~~~~~~~~-~~~~~~~~~la~~l~~~~~---~~~v~~~~sG~eA~~~al~~a~~-~t~~~~~~~~---------~~~~ 191 (465)
|+.++.+... .+.+++..+|+++|.+..+ .++|+|++||+||++.|||+|+. |+...+.... .++.
T Consensus 394 Qa~rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~ 473 (817)
T PLN02974 394 AAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIEL 473 (817)
T ss_pred HHhhCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCC
Confidence 9999877644 3567889999999999664 47999999999999999999964 6543332100 1377
Q ss_pred eEEEEcCCcccCccccccccCCCCcCCCC-CC-CC--------CC------ce--EeeCC--C-----------------
Q 012368 192 EFVSFTNSFHGRTMGALALTSKEHYRSPF-EP-VM--------PG------VN--FVEYG--N----------------- 234 (465)
Q Consensus 192 ~ii~~~~~yhg~~~~~~~~~~~~~~~~~~-~~-~~--------~~------~~--~~~~~--d----------------- 234 (465)
+||.+.++|||.+.+++++++...+...+ .+ .. +. .. .+|++ +
T Consensus 474 kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~ 553 (817)
T PLN02974 474 KVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFD 553 (817)
T ss_pred EEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCcccccccccccccccccccccc
Confidence 89999999999999999988654333221 11 00 00 00 01111 0
Q ss_pred ------------HHHHHhhcC-------CCCeEEEEEccc-CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCC
Q 012368 235 ------------IEATRKLIQ-------PGKTAAVFVEPI-QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGR 294 (465)
Q Consensus 235 ------------~~~le~~l~-------~~~~a~vi~ep~-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr 294 (465)
.+.+++.|+ .+++++||+||+ ++.||+++++++|+++|+++|++||++||+|||+|||||
T Consensus 554 ~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGR 633 (817)
T PLN02974 554 KTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWR 633 (817)
T ss_pred ccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCc
Confidence 245666663 357999999995 899999999999999999999999999999999999999
Q ss_pred CCccccccccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccC------CCCcCCCCChHHHHHHHHHHHHHhcCchH
Q 012368 295 TGYLWAHEHYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINY------GDHGSTFAGSPLVCNAAIAVLDKISNPAF 367 (465)
Q Consensus 295 ~g~~~~~~~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~------~~~~~t~~~~~~~~~aa~a~L~~~~~~~~ 367 (465)
+|.+|+++++++.|||+|++|+++|| +|+|++++++++++.+.. ..|++||++||++|+|++++|++++++++
T Consensus 634 tG~~fa~e~~gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~ 713 (817)
T PLN02974 634 LGVESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPST 713 (817)
T ss_pred ccchhhHHhcCCCCCEEeecccccCCCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccH
Confidence 99999999999999999999999999 699999999999998852 24889999999999999999999988755
Q ss_pred HHHH----HHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCC----------hHHHHHHHH-HCCceEeecCCCCE
Q 012368 368 LASV----SKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS----------ATPVVDACR-DSGLLVLTAGKGNV 432 (465)
Q Consensus 368 ~~~~----~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~----------~~~~~~~l~-~~Gv~v~~~~~~~~ 432 (465)
.+++ .++++++.+.|.+.+..+|.+..+++.|+|+++++..+ +..+.+.|+ ++||++++.+ ++
T Consensus 714 ~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~G--nv 791 (817)
T PLN02974 714 NPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPLG--NV 791 (817)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEecC--CE
Confidence 5554 44556666666555567899999999999999999311 245778888 9999999865 78
Q ss_pred EEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 433 VRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 433 lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
+++.||+.++++++++++++|.+.|
T Consensus 792 i~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 792 VYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999998865
No 79
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=1.8e-57 Score=457.66 Aligned_cols=388 Identities=37% Similarity=0.629 Sum_probs=332.2
Q ss_pred ccccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhc
Q 012368 74 VGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACS 153 (465)
Q Consensus 74 ~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~ 153 (465)
.+.+.+.|+++++++|+|+||.||++||||++++++.++||+||+|++|+.++++.+.+.+..+.++...++++.+++..
T Consensus 7 ~~~~~~~~~~~~~~~G~~~~d~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 86 (400)
T PTZ00125 7 AHNYHPLPVVLKRGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLF 86 (400)
T ss_pred ccccCCCCccEEeeecCEEEeCCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCC
Confidence 34456778999999999999999999999999999999999999999999999987665544444666788888888887
Q ss_pred CCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCC
Q 012368 154 FADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG 233 (465)
Q Consensus 154 ~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (465)
+.++++|++||++|++.|+++++.++....+. ..++++||.++.+|||.+...+..++...+...+.+..+++..++++
T Consensus 87 ~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~-~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (400)
T PTZ00125 87 GYDKVLPMNSGAEAGETALKFARKWGYEVKGI-PENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYN 165 (400)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhccCC-CCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCC
Confidence 78899999999999999999998653111000 01367899999999999999888776543333344555567788899
Q ss_pred CHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEe
Q 012368 234 NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTL 313 (465)
Q Consensus 234 d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~ 313 (465)
|+++|+++++.+++++|++||+++++|.+.++++|+++|+++|++||++||+||||+|||++|.++..+.+++.||++++
T Consensus 166 d~~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~~ 245 (400)
T PTZ00125 166 DVEALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVLL 245 (400)
T ss_pred CHHHHHHHhCCCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEEEE
Confidence 99999999974579999999999999999989999999999999999999999999999999987777778899999999
Q ss_pred cccCCCc-cceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 012368 314 AKPLAGG-LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHV 392 (465)
Q Consensus 314 sK~lg~G-~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 392 (465)
||++++| +|+|++++++++++.+....+..|++++|++++++.++|+.+.++++.++++++++++++.|++++..++.+
T Consensus 246 sK~l~~g~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 325 (400)
T PTZ00125 246 GKALSGGLYPISAVLANDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKELLKKSPWV 325 (400)
T ss_pred cccccCCCcCcEEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 9999987 599999999999998876667788999999999999999988777888999999999999999887667776
Q ss_pred eeeeccceEEEEEecC----ChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhhc
Q 012368 393 KDVRGLGLIIGIEFDV----SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDSN 463 (465)
Q Consensus 393 ~~~~~~g~~~~i~~~~----~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 463 (465)
..+++.|.++++.++. ...++++.|+++||++.|.+. +++||+|++.++++++++++++|.++++++..|
T Consensus 326 ~~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~~~~ 399 (400)
T PTZ00125 326 KEIRGKGLLNAIVFDHSDGVNAWDLCLKLKENGLLAKPTHD-NIIRFAPPLVITKEQLDQALEIIKKVLKSFDSN 399 (400)
T ss_pred EEEecccEEEEEEEccCcchHHHHHHHHHHHCCeEEeecCC-CEEEEECCccCCHHHHHHHHHHHHHHHHHHhcC
Confidence 6788899999998842 356789999999999988754 799999999999999999999999999988654
No 80
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=2.6e-57 Score=456.35 Aligned_cols=391 Identities=34% Similarity=0.586 Sum_probs=332.6
Q ss_pred HHHHHHHHhccccccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHH
Q 012368 63 KEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQ 142 (465)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~ 142 (465)
+++++....+....+.+.|+++++++|+|+||.||++||||.+++++.++||+||+|.+|+.+++++..+.+..+.++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~ 85 (401)
T PRK00854 6 EDLIATEQRLGAHNYKPLDVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRNDQL 85 (401)
T ss_pred HHHHHHHhhhhhcccCCCCceEEeeeeCEEEECCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHH
Confidence 44554444444455667789999999999999999999999999999999999999999999999987665444566778
Q ss_pred HHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCC
Q 012368 143 IELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEP 222 (465)
Q Consensus 143 ~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 222 (465)
.+++++|++..+.+++++++||+||++.|+++++.++....+. .+++++||+++.+|||++..++.++..+..+..+.+
T Consensus 86 ~~l~~~l~~~~~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~-~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~ 164 (401)
T PRK00854 86 APLYEELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGV-PEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGP 164 (401)
T ss_pred HHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCC-CCCCceEEEECCCcCCccHHHHhccCCccccccCCC
Confidence 9999999999888899999999999999999999874211000 013578999999999999888777766554444556
Q ss_pred CCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccccc
Q 012368 223 VMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHE 302 (465)
Q Consensus 223 ~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~ 302 (465)
..+++.++|++|++++++++.+ ++++|++||+++++|.+.++++|+++|+++|++||++||+||+|+|||++|.+++.+
T Consensus 165 ~~~~~~~~~~~d~~~le~~i~~-~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~ 243 (401)
T PRK00854 165 FTPGFRVVPFGDAEALEAAITP-NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEE 243 (401)
T ss_pred CCCCeEEeCCCCHHHHHHHhCC-CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHh
Confidence 6678888999999999999974 689999999999999999889999999999999999999999999999999876667
Q ss_pred ccCCcccEEEecccCCCc-cceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 012368 303 HYGIFPDIMTLAKPLAGG-LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKET 381 (465)
Q Consensus 303 ~~~~~pdi~t~sK~lg~G-~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~ 381 (465)
++++.||++++||++++| +|+|++++++++++.+....+..||+++|++++++.++|+.++++++.++++++++++++.
T Consensus 244 ~~g~~~D~~~~~K~l~gg~~~ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~ 323 (401)
T PRK00854 244 HEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTEEGMIENAAEMGAYFLEG 323 (401)
T ss_pred hcCCCCCEEEecccccCCccCeEEEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 788999999999999988 7999999999999988766678899999999999999999887777889999999999999
Q ss_pred HHHHHHcCCCceeeeccceEEEEEe-c--CChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 382 LKQKLARNPHVKDVRGLGLIIGIEF-D--VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 382 l~~~~~~~~~~~~~~~~g~~~~i~~-~--~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
|+++ ..+.+..+++.|.++.+.+ + ....++++.|+++||++.+.+. +++||+|++.+++++|++++++|++++.
T Consensus 324 L~~~--~~~~~~~~~g~g~~~~i~~~~~~~~~~~~~~~L~~~GV~v~~~~~-~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 324 LRSI--RSNIVREVRGRGLMLAVELEPEAGGARQYCEALKERGLLAKDTHD-HTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred HHhh--ccCceEEEeccceEEEEEEecCchhHHHHHHHHHHCCeEEecCCC-CEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 9876 2233456788899998877 2 2356799999999999987654 7899999999999999999999998764
No 81
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=3.5e-56 Score=443.90 Aligned_cols=367 Identities=43% Similarity=0.742 Sum_probs=317.4
Q ss_pred cCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCC
Q 012368 77 YNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFAD 156 (465)
Q Consensus 77 ~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~ 156 (465)
|.+.|+++++++|+|+||.||++||||.+++++.+||| ||+|++|+.+++++.......+.++...++++++... ...
T Consensus 8 ~~~~~~~~~~~~G~~l~d~dg~~~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~-~~~ 85 (375)
T PRK04260 8 YKRAAIEFVKAEGNYLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWHSPNLYLNSLQEEVAQKLIGD-KDY 85 (375)
T ss_pred cCCCCceEEEeeeCEEEeCCCCEEEECCCCcccccCCC-CHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHhcC-cCC
Confidence 44568899999999999999999999999999999999 9999999999998754433334455567777766542 133
Q ss_pred eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHH
Q 012368 157 RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIE 236 (465)
Q Consensus 157 ~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 236 (465)
.++|++||+||++.|+++++.+++ +++||+++++|||++...++.++.......+.+....+...+++|++
T Consensus 86 ~~~~~~SGseA~~~Al~~ar~~~~---------~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~ 156 (375)
T PRK04260 86 LAFFCNSGAEANEAAIKIARKATG---------KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLN 156 (375)
T ss_pred EEEEcCccHHHHHHHHHHHHHhcC---------CCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHH
Confidence 679999999999999999998763 77899999999999988887766544443444433445555678999
Q ss_pred HHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEeccc
Q 012368 237 ATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKP 316 (465)
Q Consensus 237 ~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~ 316 (465)
++++++.+ ++++|++||+++++|+++++.+|+++|.++|+++|+++|+||+|+|||++|.++.++.+++.||++||||+
T Consensus 157 ~l~~~l~~-~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~t~sK~ 235 (375)
T PRK04260 157 SVKALVNK-NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIFTLAKG 235 (375)
T ss_pred HHHHhcCC-CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEEEeccc
Confidence 99999864 68999999999999999999999999999999999999999999999999887777778999999999999
Q ss_pred CCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeee
Q 012368 317 LAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVR 396 (465)
Q Consensus 317 lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 396 (465)
+++|+|+|++++++++++.+....+.+||++||++++++.++|+.++.+++.+++++.++++++.+.+++..++.+..++
T Consensus 236 l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 315 (375)
T PRK04260 236 LANGVPVGAMLAKSSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVR 315 (375)
T ss_pred ccCCcceEEEEEcHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEe
Confidence 99999999999999999988766688899999999999999999987788999999999999999999888887667888
Q ss_pred ccceEEEEEecCChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHH
Q 012368 397 GLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKT 456 (465)
Q Consensus 397 ~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~ 456 (465)
+.|+++++++.....++.+.|+++||++.+.+. +.+|+.|++.++++|+++++++|+++
T Consensus 316 ~~g~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 316 GLGYMIGIETTADLSQLVEAARDKGLIVLTAGT-NVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred ccceEEEEEecCcHHHHHHHHHhCCCEEecCCC-CEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 899999999865678899999999999988765 78999999999999999999999875
No 82
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=1.6e-55 Score=443.84 Aligned_cols=384 Identities=21% Similarity=0.299 Sum_probs=308.3
Q ss_pred cccccchhhhccCCCCCCcchHHHHHHHHhccccccC-CCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHH
Q 012368 42 SVNVEVNDAARGSAGGLGRNNKEVMEAEKKLLVGTYN-RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWI 120 (465)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~ 120 (465)
|.+| +++|.+++|+|+++..+... .|. +.|+++++++|+|+||.|||+||||.+++++.++||+||+|.
T Consensus 1 s~~l-~~~a~~~~p~g~~~~~~~~~---------~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~ 70 (431)
T PRK06209 1 SQLL-QSRLHALIPGGAHTYAKGDD---------QYPELAPGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVV 70 (431)
T ss_pred CHHH-HHHHHhhCCCCCCCCccccc---------cCCCCCCeEEEeccCCEEEeCCCCEEEEccccccchhcCCCCHHHH
Confidence 4567 89999999999987776321 122 468999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC-CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEE-cC
Q 012368 121 KAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSF-TN 198 (465)
Q Consensus 121 ~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~-~~ 198 (465)
+|+.+|+++... ...++....+++++|++..+ .++|+|++||+||++.|+|+|+.||+ +.+|+.+ ..
T Consensus 71 ~Ai~~q~~~~~~--~~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tg---------r~~i~~~~~~ 139 (431)
T PRK06209 71 EAVREALQDGCN--FTRPSAIELDAAESFLELIDGADMVKFCKNGSDATSAAVRLARAYTG---------RDLVARCADH 139 (431)
T ss_pred HHHHHHHHhCcC--CCCCCHHHHHHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHHhC---------CCeEEEeccC
Confidence 999999998643 22344556689999999886 68999999999999999999999985 7788888 67
Q ss_pred CcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcC--CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHH
Q 012368 199 SFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDAC 276 (465)
Q Consensus 199 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~--~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~ 276 (465)
+|||+.......+.... .. ..........++++|+++|+++++ .+++++||+||++++ .++++||++|+++|
T Consensus 140 ~~h~~~~~~~g~~~~~~-~~-~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavi~Epv~g~----~~~~~~l~~l~~lc 213 (431)
T PRK06209 140 PFFSTDDWFIGTTPMSA-GI-PASVSALTVTFRYNDIASLEALFEDHPGRIACVILEPATAD----EPQDGFLHEVRRLC 213 (431)
T ss_pred ccccccccccccCCCCC-CC-ChhHhccccccCCCCHHHHHHHHHhCCCCEEEEEEccccCC----CCCHHHHHHHHHHH
Confidence 77764322111100000 00 000112234578899999999986 347999999999876 67899999999999
Q ss_pred HHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhh--cc----C--CCCcCCCCCh
Q 012368 277 DDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASA--IN----Y--GDHGSTFAGS 348 (465)
Q Consensus 277 ~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~--~~----~--~~~~~t~~~~ 348 (465)
++||++||+|||++||++.+ .+...++++.||++|+||++|+|+|+|++++++++++. +. . ..+++|+++|
T Consensus 214 ~~~g~lLI~DEv~tG~~~~~-~g~~~~~gv~PDi~t~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~n 292 (431)
T PRK06209 214 HENGALFILDEMITGFRWHM-RGAQKLYGIVPDLSCFGKALGNGFAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAE 292 (431)
T ss_pred HHcCCEEEEEcccccCCcCc-chhhHHhCCCcceeeehhhhcCCcccEEEEEHHHHHhhhcccccCCCCceeeccCCCCC
Confidence 99999999999999997643 23455689999999999999999999999999999986 31 1 1367899999
Q ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEec------CC----hHHHHHHHH
Q 012368 349 PLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFD------VS----ATPVVDACR 418 (465)
Q Consensus 349 ~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~------~~----~~~~~~~l~ 418 (465)
|++++|++++|+++++++++++++++++++++.|+++..+++....+++.|.++.+.+- .. ...+.+.|+
T Consensus 293 p~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 372 (431)
T PRK06209 293 THALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETI 372 (431)
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHH
Confidence 99999999999999888899999999999999999988888887778888887776651 11 125678889
Q ss_pred HCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 419 DSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 419 ~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
++|+++.+ + +++..||++||++++++|+++++.++
T Consensus 373 ~~Gi~~p~------l--~is~~ht~~dId~~l~~l~~~l~~~~ 407 (431)
T PRK06209 373 RRGVLMPS------L--VVSYAHGDADIERTIDAVHGALGVYR 407 (431)
T ss_pred HCCccccc------c--cccccCCHHHHHHHHHHHHHHHHHHH
Confidence 99998732 2 44678999999999999999998874
No 83
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=6.4e-55 Score=441.33 Aligned_cols=369 Identities=45% Similarity=0.795 Sum_probs=321.9
Q ss_pred CCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCC-CCCHHHHHHHHHHHhhcC--C
Q 012368 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNM-YYSIPQIELAKRLVACSF--A 155 (465)
Q Consensus 79 ~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~-~~~~~~~~la~~l~~~~~--~ 155 (465)
+.|+++++++|+++||.||++||||.++++++++||+||+|++|+.+++.+....... +.++...+++++|++.++ .
T Consensus 17 ~~~~~~~~~~g~~~~d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (413)
T cd00610 17 PYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTPEGL 96 (413)
T ss_pred CCCceEEeeecCEEEeCCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcccCCHHHHHHHHHHHHhCCCCC
Confidence 5789999999999999999999999999999999999999999999999765433222 246678999999999998 8
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCC--
Q 012368 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG-- 233 (465)
Q Consensus 156 ~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 233 (465)
++++|++||+||++.|+++++.++ ++++|++++++|||++...+..++...+...+.+...++..+|++
T Consensus 97 ~~v~~~~sgsea~~~al~~~~~~~---------~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (413)
T cd00610 97 DKVFFVNSGTEAVEAALKLARAYT---------GRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYR 167 (413)
T ss_pred CEEEEcCcHHHHHHHHHHHHHHHc---------CCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCcc
Confidence 999999999999999999998776 488999999999999998888776544443444445567778888
Q ss_pred ---------CHHHHHhhcCC--CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccccc
Q 012368 234 ---------NIEATRKLIQP--GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHE 302 (465)
Q Consensus 234 ---------d~~~le~~l~~--~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~ 302 (465)
|+++|+++++. +++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|+|||+.|..+..+
T Consensus 168 ~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~ 247 (413)
T cd00610 168 YRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFE 247 (413)
T ss_pred ccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHh
Confidence 89999999874 5789999999999999988899999999999999999999999999999998877778
Q ss_pred ccCCcccEEEecccCCCccceeeEEeCHHHHhhc--cCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Q 012368 303 HYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAI--NYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKE 380 (465)
Q Consensus 303 ~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~--~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~ 380 (465)
.+++.||++|+||++++|+|+|++++++++++.+ ....+.+|+++++++++++.++|+.++++++.++++++++++++
T Consensus 248 ~~~~~~d~~t~sK~l~~g~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~ 327 (413)
T cd00610 248 HFGVEPDIVTLGKGLGGGLPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRE 327 (413)
T ss_pred hcCCCCCeEEEcccccCccccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999986 44567789999999999999999998778899999999999999
Q ss_pred HHHHHHHcCCCceeeeccceEEEEEecC----------ChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHH
Q 012368 381 TLKQKLARNPHVKDVRGLGLIIGIEFDV----------SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAV 450 (465)
Q Consensus 381 ~l~~~~~~~~~~~~~~~~g~~~~i~~~~----------~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l 450 (465)
.|+++...++.+..+++.|.++++.+.. ....+.+.|+++||++.+++ ++.+|+++++.+|++++++++
T Consensus 328 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~-~~~lR~~~~~~~t~~~i~~~~ 406 (413)
T cd00610 328 RLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG-GNVIRLLPPLIITEEEIDEGL 406 (413)
T ss_pred HHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC-CCEEEEECCCcCCHHHHHHHH
Confidence 9998866556666678889999998832 24678899999999999875 378999999999999999999
Q ss_pred HHHHHHH
Q 012368 451 EILCKTL 457 (465)
Q Consensus 451 ~~l~~~l 457 (465)
++|++++
T Consensus 407 ~~l~~~l 413 (413)
T cd00610 407 DALDEAL 413 (413)
T ss_pred HHHHHhC
Confidence 9998763
No 84
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=100.00 E-value=9.9e-55 Score=388.87 Aligned_cols=385 Identities=26% Similarity=0.495 Sum_probs=318.5
Q ss_pred HHHHHHHhccccc----cCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCC
Q 012368 64 EVMEAEKKLLVGT----YNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYS 139 (465)
Q Consensus 64 ~~~~~~~~~~~~~----~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~ 139 (465)
+.+..++++..+. |+.-|+.++|++|.|++|.+|++|||+.+|.. .-||+||+|++|...++..... ...+.+
T Consensus 9 etlklRk~hIG~~Cq~Fy~sDP~kivRaq~QYmfDE~g~~yLDCInNVa--Hvghchp~VV~A~~kQmat~~t-N~RFlh 85 (452)
T KOG1403|consen 9 ETLKLRKQHIGQACQLFYRSDPLKIVRAQGQYMFDEEGTRYLDCINNVA--HVGHCHPEVVRAGAKQMATIST-NNRFLH 85 (452)
T ss_pred HHHhHHHhccCcceeEEecCCchhhehhccceeeccCcccHHHHhhhhh--hcccCCHHHHHHHHHHHhHhcc-cchhhH
Confidence 3444444444442 55679999999999999999999999999854 6799999999999999987533 345556
Q ss_pred HHHHHHHHHHHhhcC-CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCC
Q 012368 140 IPQIELAKRLVACSF-ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRS 218 (465)
Q Consensus 140 ~~~~~la~~l~~~~~-~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~ 218 (465)
+...+.++.|...++ .+-++|+|||+|||++|+|+||.||+ ...+|+.+..|||+....+.++.-.....
T Consensus 86 d~lv~cA~~l~stlPeLsvc~F~NSGSEANDLALRLAR~ftk---------hqDvItldHAYHGHl~s~mE~SPYKF~~g 156 (452)
T KOG1403|consen 86 DELVQCARTLTSTLPELSVCFFVNSGSEANDLALRLARNFTK---------HQDVITLDHAYHGHLQSVMEVSPYKFNQG 156 (452)
T ss_pred HHHHHHHHHHhhcCCCceEEEEecCCchhhHHHHHHHHhhcc---------cCceEEEechhccceeeeeeccceeccCC
Confidence 667788888877776 88999999999999999999999985 67799999999999998888774322111
Q ss_pred CCCCCCCC-ceEeeCC---------------C-----HHHHHhhcC-----CCCeEEEEEcccCCCCCcccCCHHHHHHH
Q 012368 219 PFEPVMPG-VNFVEYG---------------N-----IEATRKLIQ-----PGKTAAVFVEPIQGEGGIYSATKEFLQFL 272 (465)
Q Consensus 219 ~~~~~~~~-~~~~~~~---------------d-----~~~le~~l~-----~~~~a~vi~ep~~~~~G~~~~~~~~l~~l 272 (465)
.-.. .|+ +...|.+ | .+.++++++ ...++++|.|..++.||.++||++|++.+
T Consensus 157 ~~v~-kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~V 235 (452)
T KOG1403|consen 157 GGVA-KPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAV 235 (452)
T ss_pred CCcC-CCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHH
Confidence 0000 011 1111211 1 234555553 45789999999999999999999999999
Q ss_pred HHHHHHhCCEEEEeccccCCCCCCc-cccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccC--CCCcCCCCChH
Q 012368 273 RDACDDAGALLVFDEVQCGLGRTGY-LWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINY--GDHGSTFAGSP 349 (465)
Q Consensus 273 ~~l~~~~g~llI~DEv~~g~gr~g~-~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~--~~~~~t~~~~~ 349 (465)
.+..+.+|.+.|.||||.||||.|. .|+++.++..|||+|++|.+|+|.|+++|+..+++.+.+.. ..+..||++||
T Consensus 236 a~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmGNGhPVa~VattkeIA~Af~atgv~YFNTyGGnP 315 (452)
T KOG1403|consen 236 ADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMGNGHPVAAVATTKEIAQAFHATGVEYFNTYGGNP 315 (452)
T ss_pred HHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheecccCCCCCeeeEEeccHHHHHHhccccceehhccCCCc
Confidence 9999999999999999999999997 78999999999999999999999999999999999999864 35778999999
Q ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEe--c----C----ChHHHHHHHHH
Q 012368 350 LVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEF--D----V----SATPVVDACRD 419 (465)
Q Consensus 350 ~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~--~----~----~~~~~~~~l~~ 419 (465)
.+|+++++++++++++++.++..+.+++|...|.++..+++++.+++|.|+|+++++ + . .+..+..+|.+
T Consensus 316 VsCAv~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke 395 (452)
T KOG1403|consen 316 VSCAVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKE 395 (452)
T ss_pred hhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998 2 1 13345666775
Q ss_pred -CCceEeecCC-CCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 420 -SGLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 420 -~Gv~v~~~~~-~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
.||++...|+ .+.+.|-||++.++++.++++..|+++|.-+.
T Consensus 396 ~y~VLlsaDGPh~NilKiKPPmCFneena~e~v~~ld~iLT~me 439 (452)
T KOG1403|consen 396 LYRVLLSADGPHRNILKIKPPMCFNEENADEFVLGLDEILTVME 439 (452)
T ss_pred hhhEEEecCCCCCceeecCCCcccChhhHHHHHHHHHHHHHHHH
Confidence 4799987665 58899999999999999999999999887543
No 85
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=8e-53 Score=421.16 Aligned_cols=375 Identities=52% Similarity=0.888 Sum_probs=320.1
Q ss_pred ccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCC
Q 012368 76 TYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFA 155 (465)
Q Consensus 76 ~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~ 155 (465)
++.+.|+++++++|+++||.||++||||.+++++++|||+||.|.+++.+++.+..+....++++...+|+++|+++++.
T Consensus 5 ~~~~~~~~~~~~~g~~~~~~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~ 84 (379)
T TIGR00707 5 TYGRLPVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHSGA 84 (379)
T ss_pred ccCCCCccEEEeecCEEEeCCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCC
Confidence 35578999999999999999999999999999999999999999999999998764444456777899999999999998
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCH
Q 012368 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNI 235 (465)
Q Consensus 156 ~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 235 (465)
+++++++||++|++.++++++.+++..++ ++++|++++++|||+...+...++...+...+.+...++.+++++|+
T Consensus 85 ~~~~~~~sg~~a~~~a~~~~~~~~~~~~~----~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 160 (379)
T TIGR00707 85 DRVFFCNSGAEANEAALKLARKYTGDKGK----EKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDI 160 (379)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHhhccCC----CCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCH
Confidence 89999999999999999998876641111 26899999999999998887766554433233455556677888999
Q ss_pred HHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecc
Q 012368 236 EATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAK 315 (465)
Q Consensus 236 ~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK 315 (465)
+++++.+.+ ++++|+++|+++++|..+++.+++++|.++|++||+++|+||+|++|++.|.++.....++.||++||||
T Consensus 161 ~~l~~~~~~-~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~t~sK 239 (379)
T TIGR00707 161 ESLKKAIDD-ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDIITLAK 239 (379)
T ss_pred HHHHHHhhh-CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEEEEcc
Confidence 999999974 5789999999999998778999999999999999999999999999988876555556688899999999
Q ss_pred cCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceee
Q 012368 316 PLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDV 395 (465)
Q Consensus 316 ~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 395 (465)
++++|+|+||+++++++++.+....+..+++.++++++++.++|+.++.+++.+++++++++++++|+++....+. ..+
T Consensus 240 ~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~ 318 (379)
T TIGR00707 240 GLGGGVPIGATLAKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGKNYPN-KEV 318 (379)
T ss_pred cccCCcccEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhCCC-Ccc
Confidence 9999999999999999999998666677889999999999999998866778899999999999999887554443 345
Q ss_pred eccceEEEEEecCChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 396 RGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 396 ~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
++.|.++++.++.+..++.+.|.++||++.+.+. +++||++++.+|++++++++++|++++
T Consensus 319 ~~~g~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 319 RGKGLMLGIELEAPCKDIVKKALEKGLLVNCAGP-KVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred ccCceEEEEEecCcHHHHHHHHHHCCcEEeeCCC-CEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 5678899998855567899999999999998764 789999999999999999999998753
No 86
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.3e-43 Score=320.03 Aligned_cols=395 Identities=27% Similarity=0.380 Sum_probs=299.8
Q ss_pred cCCCCCCcchHHHHHHHHhccccccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHH-HHhh-c
Q 012368 53 GSAGGLGRNNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVD-QANV-L 130 (465)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~-~~~~-~ 130 (465)
.+||. .++++.+.-.++...+--.++...++.-|.|++|+|||.+||.++...++++|++||.+++++.+ ++.+ +
T Consensus 34 sIPGP---ks~~l~kel~~v~~t~~v~F~~dYEkS~GNYlvDvDGN~lLDvYsQIsSvplGYn~P~LvK~a~~p~~~~~l 110 (484)
T KOG1405|consen 34 SIPGP---KSQELKKELDKVQDTEAVHFFVDYEKSIGNYLVDVDGNRLLDVYSQISSVPLGYNNPALVKAAQQPQNATML 110 (484)
T ss_pred cCCCc---hhHHHHHHHhHhhcccceEEehhhhhhcCceEEecCCCeeehhhhhhcccccCCCCHHHHHHhcChHHHHHH
Confidence 45553 56666655444333222235566789999999999999999999999999999999999988764 3222 2
Q ss_pred ccccCCCCCHHHHHHHHHHHh----hcC--CCeEEecCCHHHHHHHHHHHHHHHhh--hcCC---------------CCC
Q 012368 131 THVSNMYYSIPQIELAKRLVA----CSF--ADRVFFSNTGTEANEAAIKFARKFQR--HSNP---------------DSK 187 (465)
Q Consensus 131 ~~~~~~~~~~~~~~la~~l~~----~~~--~~~v~~~~sG~eA~~~al~~a~~~t~--~~~~---------------~~~ 187 (465)
...+.. ..-+..++++.|.+ .-+ .++|.+.-+|+.||+.|++.+.-+.. .++. .++
T Consensus 111 vnRPAL-g~fP~kd~~~~l~~~ll~~APKG~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm~n~aPg 189 (484)
T KOG1405|consen 111 VNRPAL-GNFPPKDFAEKLRQSLLSIAPKGQKQVITMLCGSCANENAYKTAFIWYRAKERGQAGFSAEELESCMINQAPG 189 (484)
T ss_pred hccccc-cCCChhhHHHHHHHHHHhhCcchHHHHHHHhccccccHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCC
Confidence 221111 11123344454444 333 77899999999999999998876542 1221 122
Q ss_pred CCCceEEEEcCCcccCccccccccCCCCcCC----CC-CCCCCCce--------EeeCC------CHHHHHhhcC-----
Q 012368 188 EPATEFVSFTNSFHGRTMGALALTSKEHYRS----PF-EPVMPGVN--------FVEYG------NIEATRKLIQ----- 243 (465)
Q Consensus 188 ~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~----~~-~~~~~~~~--------~~~~~------d~~~le~~l~----- 243 (465)
.|.-.|+.|.++|||.+.+.++.+....... .| +|. ..+. .+.+| .++++|++|.
T Consensus 190 ~P~lsvlsF~gaFHGR~~g~lstT~SKpIHKldiPaFdWPi-A~fP~ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k 268 (484)
T KOG1405|consen 190 APDLSVLSFKGAFHGRTFGSLSTTHSKPIHKLDIPAFDWPI-APFPRYKYPLDENVAENKKEDQGCLAEVEDLIVKYRKK 268 (484)
T ss_pred CCceeeeeeccccccccccccccccCccccccCCCCCCCCC-CCCccccCChhhhhhhhhhhhhhHHHHHHHHHHHHhhc
Confidence 4566899999999999999998764332221 01 011 1111 11111 3778888886
Q ss_pred CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCC--cccEEEecccCC-Cc
Q 012368 244 PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGI--FPDIMTLAKPLA-GG 320 (465)
Q Consensus 244 ~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~--~pdi~t~sK~lg-~G 320 (465)
...++++|+||++++||....+++|++.|+++|++||+.+|+||||||.|.+|..|+++++++ .||++||||.+- ||
T Consensus 269 ~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFSKK~q~gG 348 (484)
T KOG1405|consen 269 KKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFSKKFQTGG 348 (484)
T ss_pred CCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccceehhhhhhcCc
Confidence 247899999999999999999999999999999999999999999999999999999999988 589999999875 44
Q ss_pred cceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCC-Cceeeeccc
Q 012368 321 LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNP-HVKDVRGLG 399 (465)
Q Consensus 321 ~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~g 399 (465)
+. -.++++- =.+..+..||.+.|.-.....++++++.++++.+++...++.|..+|.++.+++| .+...||+|
T Consensus 349 ----ff-h~~~frp-n~pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrG 422 (484)
T KOG1405|consen 349 ----FF-HDEEFRP-NEPYRIFNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRG 422 (484)
T ss_pred ----cc-cCcccCC-CchHHHhhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccc
Confidence 22 2233221 1123567899999999999999999999999999999999999999999999998 567899999
Q ss_pred eEEEEEecC--ChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 400 LIIGIEFDV--SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 400 ~~~~i~~~~--~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
.|+.++++. .-..++..++-+||.+..+|. ..+||+|+++.++...+-+++++++.++.
T Consensus 423 TF~a~d~ps~~~Rdk~i~~~~~nGv~~GGCg~-~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 423 TFIAWDCPSGSIRDKLILIARLNGVNLGGCGD-KSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred eEEEEeCCChHHHHHHHHHHHHcCceeccccc-ceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 999999842 235688888899999998887 78999999999999999999999998864
No 87
>PRK07505 hypothetical protein; Provisional
Probab=100.00 E-value=9.4e-40 Score=328.58 Aligned_cols=365 Identities=15% Similarity=0.121 Sum_probs=258.8
Q ss_pred hHHHHHHHHhccccccC--CCceEEEeeeccEEEeCCCCEEEecccCcccccCC-CCCHHHHHHHHHHHhhcc---cccC
Q 012368 62 NKEVMEAEKKLLVGTYN--RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALG-HGDADWIKAVVDQANVLT---HVSN 135 (465)
Q Consensus 62 ~~~~~~~~~~~~~~~~~--~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lG-h~~p~v~~a~~~~~~~~~---~~~~ 135 (465)
.+.++.+.++...+.|. +.++.+++++|+++||.||++||||+++ ..+| |+||+|++|+.+++++.. +...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~d~~g~~~ld~~s~---~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~ 84 (402)
T PRK07505 8 NKKRINRAEKFWDAAYDEGLNGLTVGEREGILITLADGHTFVNFVSC---SYLGLDTHPAIIEGAVDALKRTGSLHLSSS 84 (402)
T ss_pred HHHHHHhhHHHHHHHHhcccccceeeccCCccEEecCCceEEEeecC---CccCCCCCHHHHHHHHHHHHHhCCCCCCcc
Confidence 34444444343333333 4568899999999999999999999984 4688 999999999999998743 1111
Q ss_pred --CCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 136 --MYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 136 --~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
.+.++...+++++|++.++. ++++++||++|++.+++++..... + .++.+||+++++|||......
T Consensus 85 ~~~~~~~~~~~l~~~la~~~~~-~~~~~~sG~~a~~~ai~~~~~~~~---~---~~~~~vi~~~~~~H~s~~~~~----- 152 (402)
T PRK07505 85 RTRVRSQILKDLEEALSELFGA-SVLTFTSCSAAHLGILPLLASGHL---T---GGVPPHMVFDKNAHASLNILK----- 152 (402)
T ss_pred chhhhhHHHHHHHHHHHHHhCC-CEEEECChHHHHHHHHHHHHhccc---C---CCCCCEEEEchhhhHhHHhhh-----
Confidence 13455688999999999887 777788999999999998763210 0 024569999999998542111
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc--cC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQ--CG 291 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~--~g 291 (465)
... ....++..+|++|+++++++++++..+++++||++++|++ .+ +++|+++|++||++||+||+| ++
T Consensus 153 -~~~----~~~~~v~~~~~~d~~~l~~~~~~~~~~~vl~~p~~~~G~~-~~----~~~i~~l~~~~~~~li~DEa~~~~~ 222 (402)
T PRK07505 153 -GIC----ADETEVETIDHNDLDALEDICKTNKTVAYVADGVYSMGGI-AP----VKELLRLQEKYGLFLYIDDAHGLSI 222 (402)
T ss_pred -hhh----hcCCeEEEeCCCCHHHHHHHHhcCCCEEEEEecccccCCc-CC----HHHHHHHHHHcCCEEEEECcccccC
Confidence 001 0114567788999999999997656889999999988654 33 899999999999999999998 56
Q ss_pred CCCCCccccccccCC-cccEE----EecccCCCccceeeEE-eCHHHHhhccCCCCcCCCCC--hHHHHHHHHHHHHHhc
Q 012368 292 LGRTGYLWAHEHYGI-FPDIM----TLAKPLAGGLPIGAAL-VTEKVASAINYGDHGSTFAG--SPLVCNAAIAVLDKIS 363 (465)
Q Consensus 292 ~gr~g~~~~~~~~~~-~pdi~----t~sK~lg~G~~iG~v~-~~~~i~~~~~~~~~~~t~~~--~~~~~~aa~a~L~~~~ 363 (465)
+|++|.++..+.++. .||.+ |+||+++++ .|+++ .++++++.+....+..||++ ++++++++.++++.+.
T Consensus 223 ~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~--Gg~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~ 300 (402)
T PRK07505 223 YGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS--GGVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIHL 300 (402)
T ss_pred cCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc--CeEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHh
Confidence 888887666667776 67644 799999863 36766 47788888866556666654 4689999999998665
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEE-EEecC--ChHHHHHHHHHCCceEeecCC------CCEEE
Q 012368 364 NPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIG-IEFDV--SATPVVDACRDSGLLVLTAGK------GNVVR 434 (465)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~-i~~~~--~~~~~~~~l~~~Gv~v~~~~~------~~~lR 434 (465)
++.+.+.. +++++.+.... .. ....+++.+.++. +.++. ...++.+.|+++||++.+... .+++|
T Consensus 301 ~~~~~~~~----~~l~~~~~~~~-~~-~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lR 374 (402)
T PRK07505 301 SEELDQLQ----QKLQNNIALFD-SL-IPTEQSGSFLPIRLIYIGDEDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLR 374 (402)
T ss_pred ccCcHHHH----HHHHHHHHHHH-HH-HHhcCCCCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEE
Confidence 44433222 22222222110 00 0112344555442 33322 356799999999999987521 26899
Q ss_pred EecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 435 LVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 435 i~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
|+|++.+|++|+++++++|++++++
T Consensus 375 i~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 375 IMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred EecCccCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998764
No 88
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=6.3e-38 Score=319.54 Aligned_cols=341 Identities=18% Similarity=0.236 Sum_probs=262.2
Q ss_pred eEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhccccc-----CCCCCHHHHHHHHHHHhhcC-C
Q 012368 82 VVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS-----NMYYSIPQIELAKRLVACSF-A 155 (465)
Q Consensus 82 ~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~-----~~~~~~~~~~la~~l~~~~~-~ 155 (465)
+++.+++|+++| .||++||||.++.+.... +||+|++|+.+++++++.++ .+++.+.+.+|+++|+++++ .
T Consensus 94 ~~~~~~~G~~i~-~~G~~~id~~s~~~lgl~--~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~ 170 (481)
T PLN02822 94 PVLESAAGPHTI-INGKDVVNFASANYLGLI--GNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTP 170 (481)
T ss_pred CceecCCCCeEE-ECCceEEEeECCCcCCCC--CCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCC
Confidence 367789999999 899999999998663322 68999999999999854422 22455669999999999998 6
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCH
Q 012368 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNI 235 (465)
Q Consensus 156 ~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 235 (465)
+.|+|++|++ ++..+++.+ ++ +.++|++++.||+.....+.+++ ..+.++++||+
T Consensus 171 ~~i~~s~G~~-a~~sai~a~---~~---------~gd~Ii~d~~~H~s~~~~~~ls~------------~~~~~~~~nd~ 225 (481)
T PLN02822 171 DSILYSYGLS-TIFSVIPAF---CK---------KGDIIVADEGVHWGIQNGLYLSR------------STIVYFKHNDM 225 (481)
T ss_pred CEEEECCHHH-HHHHHHHHh---CC---------CCCEEEEeCCccHHHHHHHHHcC------------CeEEEECCCCH
Confidence 6787776655 778877744 32 44566688999988765554432 34556788898
Q ss_pred HHHHhhcC---C-----CCe-EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc--CCCCCCcccccccc
Q 012368 236 EATRKLIQ---P-----GKT-AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC--GLGRTGYLWAHEHY 304 (465)
Q Consensus 236 ~~le~~l~---~-----~~~-a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~--g~gr~g~~~~~~~~ 304 (465)
++++..++ . .++ ++|++|++++++|.+.+ +++|+++|++||++||+||+|+ .+|++|.+ ..+++
T Consensus 226 ~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~----L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G-~~e~~ 300 (481)
T PLN02822 226 ESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP----LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRG-LSEHF 300 (481)
T ss_pred HHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCC-hHHHc
Confidence 88877764 1 123 79999999999998877 9999999999999999999998 34666665 56778
Q ss_pred CC---cccEEE--ecccCCC-ccceeeEEeCHHHHhhccCCCCcCCCCCh--HHHHHHHHHHHHHhcC-chHHHHHHHHH
Q 012368 305 GI---FPDIMT--LAKPLAG-GLPIGAALVTEKVASAINYGDHGSTFAGS--PLVCNAAIAVLDKISN-PAFLASVSKKG 375 (465)
Q Consensus 305 ~~---~pdi~t--~sK~lg~-G~~iG~v~~~~~i~~~~~~~~~~~t~~~~--~~~~~aa~a~L~~~~~-~~~~~~~~~~~ 375 (465)
++ .+|+++ |||++|. | |++++++++++.+....++.+|+++ |..++|+.++|+.++. ++..+++++++
T Consensus 301 ~v~~~~~dii~~s~sKalg~~G---G~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~ 377 (481)
T PLN02822 301 GVPIEKIDIITAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENI 377 (481)
T ss_pred CCCCCCCeEEEecchhhhhhCC---eEEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 87 688887 7899973 4 7899999999998766677888876 8888999999988755 67889999999
Q ss_pred HHHHHHHHHHHHcCCCceeeeccceEEEEEecCC----------hHHHHHHHH-HCCceEeecCC--------CCEEEEe
Q 012368 376 HYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS----------ATPVVDACR-DSGLLVLTAGK--------GNVVRLV 436 (465)
Q Consensus 376 ~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~----------~~~~~~~l~-~~Gv~v~~~~~--------~~~lRi~ 436 (465)
+++++.|.+.. .++. ...+.+.++++.++.. ..++++.|+ ++||++.+... +..+|++
T Consensus 378 ~~l~~~L~~~~-g~~~--~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~ 454 (481)
T PLN02822 378 ALLHKGLSDIP-GLSI--GSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLF 454 (481)
T ss_pred HHHHHHHHhcC-Cccc--CCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEE
Confidence 99999887641 1221 2234466666766321 256889998 88999986521 2469999
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 437 PPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 437 ~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
++..+|++||++++++|++++.++-
T Consensus 455 is~~~t~edI~~~~~~l~~~~~~~~ 479 (481)
T PLN02822 455 VSAGHTESDILKASESLKRVAASVL 479 (481)
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999988764
No 89
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=3.6e-34 Score=288.46 Aligned_cols=328 Identities=17% Similarity=0.163 Sum_probs=249.2
Q ss_pred CCCEEEecccCcccccCCC-CCHHHHHHHHHHHhhccccc----C-CCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHH
Q 012368 96 EGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVS----N-MYYSIPQIELAKRLVACSFADRVFFSNTGTEANE 169 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~----~-~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~ 169 (465)
+|+++|+|+++.+ ||. +||+|++|+.++++++.++. . .+.++...+|+++|++.++.+++++++||++|++
T Consensus 43 ~~~~~~~~~sn~y---lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~SG~~An~ 119 (406)
T PRK13393 43 GPREVTVWCSNDY---LGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEAALLFTSGYVSNW 119 (406)
T ss_pred CCccEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEeCCcHHHHH
Confidence 4689999999876 887 89999999999998865421 1 1234468999999999999889999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcC---CCC
Q 012368 170 AAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ---PGK 246 (465)
Q Consensus 170 ~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~---~~~ 246 (465)
.|++.+... .++++|+++..||+.+...+...+ ..+..++++|++++++.++ +++
T Consensus 120 ~ai~~l~~~----------~~g~~I~~~~~~H~s~~~~~~~~g------------~~~~~~~~~d~~~l~~~l~~~~~~~ 177 (406)
T PRK13393 120 AALSTLGSR----------LPGCVILSDELNHASMIEGIRHSR------------AEKRIFRHNDPADLERKLSDLDPHR 177 (406)
T ss_pred HHHHHhhcC----------CCCCEEEEccchhHHHHHHHHHcC------------CeEEEeCCCCHHHHHHHHHhccCCC
Confidence 999954321 133588899999998876554332 1234567789999988875 235
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CC-CCCCccccccccCCc--ccEE--EecccCCCc
Q 012368 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC-GL-GRTGYLWAHEHYGIF--PDIM--TLAKPLAGG 320 (465)
Q Consensus 247 ~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~-gr~g~~~~~~~~~~~--pdi~--t~sK~lg~G 320 (465)
+++|++|++++++|.+.+ +++|.++|++||+++|+||+|+ |+ |+.|.++ .++.++. +|++ ||||+++.
T Consensus 178 ~~~v~~~~v~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~-~~~~~~~~~~~i~~~tlsKa~g~- 251 (406)
T PRK13393 178 PKLVAFESVYSMDGDIAP----IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGI-AEREGLADRLTIIEGTLAKAFGV- 251 (406)
T ss_pred CEEEEEcCCCCCCCchhC----HHHHHHHHHHcCCEEEEECCccccccCCCCCch-hhhcCCCCCCeEEEEeCchhhcc-
Confidence 789999999999998877 9999999999999999999997 65 7777654 3555554 5776 89999984
Q ss_pred cceeeEEeCHHHHhhccCCCCc--CCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHHcCCCceeeec
Q 012368 321 LPIGAALVTEKVASAINYGDHG--STFAGSPLVCNAAIAVLDKISNPA-FLASVSKKGHYFKETLKQKLARNPHVKDVRG 397 (465)
Q Consensus 321 ~~iG~v~~~~~i~~~~~~~~~~--~t~~~~~~~~~aa~a~L~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 397 (465)
..||+++++++++.+...... .+.+.+|++++++.++|+.+.+.. ..++++++.+++++.|+++ .++ .+++
T Consensus 252 -~GG~~~~~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~---~~~~ 325 (406)
T PRK13393 252 -MGGYITGSAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA--GIP---HLPN 325 (406)
T ss_pred -cCceeeCCHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc--CCC---cCCC
Confidence 227888899988887653322 356678899999999999875432 3455667777888877663 232 3356
Q ss_pred cceEEEEEecC--ChHHHHHHHHH-CCceEeecCC------CCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 398 LGLIIGIEFDV--SATPVVDACRD-SGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 398 ~g~~~~i~~~~--~~~~~~~~l~~-~Gv~v~~~~~------~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
.|.++.+.+.. .+.++.+.|++ +||++.+... .+.+||+|++.+|++|+++++++|+++++++
T Consensus 326 ~~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 326 PSHIVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 78887776632 34678888987 5999976321 2679999999999999999999999988764
No 90
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=2.4e-33 Score=282.37 Aligned_cols=328 Identities=19% Similarity=0.205 Sum_probs=244.5
Q ss_pred CCCEEEecccCcccccCCC-CCHHHHHHHHHHHhhcccccC-----CCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHH
Q 012368 96 EGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVSN-----MYYSIPQIELAKRLVACSFADRVFFSNTGTEANE 169 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~ 169 (465)
+|+++++|+++.+ ||. +||+|++|+.++++++..++. .+.++...+|+++|+++++.+..++++||++||.
T Consensus 43 ~~~~~~~~~sn~y---lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~~l~~~sG~~an~ 119 (402)
T TIGR01821 43 GAKDVTVWCSNDY---LGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKESALVFTSGYVAND 119 (402)
T ss_pred CCeeEEEeEccCc---CCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCeEEEECchHHHHH
Confidence 4699999999876 665 889999999999988654321 1345668999999999999778899999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcC---CCC
Q 012368 170 AAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ---PGK 246 (465)
Q Consensus 170 ~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~---~~~ 246 (465)
.+++++... .++.+++.+..||+.....+...+. .+..++++|+++++++++ +.+
T Consensus 120 ~ai~~l~~~----------~~~~~v~~~~~~h~s~~~~~~~~g~------------~~~~~~~~d~~~l~~~l~~~~~~~ 177 (402)
T TIGR01821 120 ATLATLAKI----------IPGCVIFSDELNHASMIEGIRHSGA------------EKFIFRHNDVAHLEKLLQSVDPNR 177 (402)
T ss_pred HHHHHhhCC----------CCCCEEEEcchHhHHHHHHHHHcCC------------eEEEECCCCHHHHHHHHHhccCCC
Confidence 999987632 1345777788899887655443321 122355678899988886 235
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-C-CCCCCccccccccCC--cccEE--EecccCCCc
Q 012368 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC-G-LGRTGYLWAHEHYGI--FPDIM--TLAKPLAGG 320 (465)
Q Consensus 247 ~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g-~gr~g~~~~~~~~~~--~pdi~--t~sK~lg~G 320 (465)
+++|++|++++++|.+.+ +++|+++|++||++||+||+|+ | +|..|.+. .+.+++ .+|++ ||||++|+
T Consensus 178 ~~~v~~e~~~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~-~~~~~~~~~~div~~t~sKa~g~- 251 (402)
T TIGR01821 178 PKIIAFESVYSMDGDIAP----IEEICDLADKYGALTYLDEVHAVGLYGPRGGGI-AERDGLMHRIDIIEGTLAKAFGV- 251 (402)
T ss_pred CeEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEeCcccccccCCCCCcc-chhccCCCCCeEEEEechhhhcc-
Confidence 789999999999998876 9999999999999999999998 4 34444432 344454 46777 89999984
Q ss_pred cceeeEEeCHHHHhhccCCC--CcCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHHcCCCceeeec
Q 012368 321 LPIGAALVTEKVASAINYGD--HGSTFAGSPLVCNAAIAVLDKISNP-AFLASVSKKGHYFKETLKQKLARNPHVKDVRG 397 (465)
Q Consensus 321 ~~iG~v~~~~~i~~~~~~~~--~~~t~~~~~~~~~aa~a~L~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 397 (465)
..||+++++++++.+.... ...+.+.+|++++++.++|+.+++. ...+++.++.+++++.|+++ .++ .+.+
T Consensus 252 -~GG~i~~~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~---~~~~ 325 (402)
T TIGR01821 252 -VGGYIAASRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL--GIP---VIPN 325 (402)
T ss_pred -CCceeecCHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc--CCC---cCCC
Confidence 2278889999988875322 2345568899999999999987653 34556667777887777654 232 2334
Q ss_pred cceEEEEEecC--ChHHHHHHHHH-CCceEeecC------CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 398 LGLIIGIEFDV--SATPVVDACRD-SGLLVLTAG------KGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 398 ~g~~~~i~~~~--~~~~~~~~l~~-~Gv~v~~~~------~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
.+.++.+.++. .+.++.+.|++ +||++.+.. ...++|+++++.+|++|+++++++|+++++++
T Consensus 326 ~~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 326 PSHIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 57777776632 34678888875 599997642 12589999999999999999999999998765
No 91
>PRK09064 5-aminolevulinate synthase; Validated
Probab=100.00 E-value=5.6e-33 Score=280.20 Aligned_cols=328 Identities=18% Similarity=0.194 Sum_probs=244.8
Q ss_pred CCEEEecccCcccccCCC-CCHHHHHHHHHHHhhccccc----CC-CCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHH
Q 012368 97 GREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVS----NM-YYSIPQIELAKRLVACSFADRVFFSNTGTEANEA 170 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~----~~-~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~ 170 (465)
|++++||+++.+ ||+ .||+|++|+.+++++...++ .. ++++...+|+++|+++++.+..++++||++|+..
T Consensus 45 ~~~~~~~~s~dy---lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ 121 (407)
T PRK09064 45 EREVTVWCSNDY---LGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEAALVFTSGYVSNDA 121 (407)
T ss_pred CceEEEEECCCC---cCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHH
Confidence 599999999766 787 58999999999998754321 11 2466689999999999987777888899999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcC---CCCe
Q 012368 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ---PGKT 247 (465)
Q Consensus 171 al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~---~~~~ 247 (465)
+++++.... ++.+++.+..+|+.....+...+ .....++++|+++++++++ ++++
T Consensus 122 ai~~l~~~~----------~~~~i~~~~~~h~s~~~~~~~~~------------~~~~~~~~~d~~~le~~l~~~~~~~~ 179 (407)
T PRK09064 122 TLSTLAKLI----------PDCVIFSDELNHASMIEGIRRSR------------CEKHIFRHNDVAHLEELLAAADPDRP 179 (407)
T ss_pred HHHHHhCCC----------CCCEEEEeCcchHHHHHHHHHcC------------CcEEEECCCCHHHHHHHHHhccCCCC
Confidence 999876321 34566777666776644433221 1123456679999999886 2457
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-C-CCCCCccccccccCC--cccEE--EecccCCCcc
Q 012368 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC-G-LGRTGYLWAHEHYGI--FPDIM--TLAKPLAGGL 321 (465)
Q Consensus 248 a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g-~gr~g~~~~~~~~~~--~pdi~--t~sK~lg~G~ 321 (465)
++|+++++++++|.+.+ +++|+++|++||++||+||+|+ | ||+.|.++ .++.++ .+|++ ||||++|.
T Consensus 180 ~~v~~~~v~s~~G~~~~----l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~-~~~~~~~~~~div~~t~sKa~g~-- 252 (407)
T PRK09064 180 KLIAFESVYSMDGDIAP----IAEICDLADKYNALTYLDEVHAVGMYGPRGGGI-AERDGLMDRIDIIEGTLAKAFGV-- 252 (407)
T ss_pred eEEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEECCCcccccCCCCCCh-HHhcCCCCCCeEEEEecchhhhc--
Confidence 89999999999998876 9999999999999999999997 5 57777654 345554 46877 89999974
Q ss_pred ceeeEEeCHHHHhhccCCC--CcCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHHcCCCceeeecc
Q 012368 322 PIGAALVTEKVASAINYGD--HGSTFAGSPLVCNAAIAVLDKISNP-AFLASVSKKGHYFKETLKQKLARNPHVKDVRGL 398 (465)
Q Consensus 322 ~iG~v~~~~~i~~~~~~~~--~~~t~~~~~~~~~aa~a~L~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 398 (465)
..|++++++++++.+.... +..+.+.+|.+++++.++|+.+++. ...++++++++++++.|+++ .++. +.+.
T Consensus 253 ~GG~~~~~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~---~~~~ 327 (407)
T PRK09064 253 MGGYIAGSAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAA--GIPV---MPNE 327 (407)
T ss_pred cCceEecCHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCCC---CCCC
Confidence 2288889999888775322 2235567889999999999988654 34577888888888888764 2322 2344
Q ss_pred ceEEEEEecC--ChHHHHHHHHH-CCceEeecCC------CCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 399 GLIIGIEFDV--SATPVVDACRD-SGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 399 g~~~~i~~~~--~~~~~~~~l~~-~Gv~v~~~~~------~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
+.++.+.++. .+.++.+.|++ +||++.+... .+++||++++.+|++|++++++.|+++++++.
T Consensus 328 ~~iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~~ 399 (407)
T PRK09064 328 SHIVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARLG 399 (407)
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 6677776632 35678888875 5999976421 25799999999999999999999999987653
No 92
>PRK07179 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-32 Score=277.12 Aligned_cols=339 Identities=20% Similarity=0.259 Sum_probs=247.5
Q ss_pred cccccCCCceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccc---cCCC--CCHHHHHHHH
Q 012368 73 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHV---SNMY--YSIPQIELAK 147 (465)
Q Consensus 73 ~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~---~~~~--~~~~~~~la~ 147 (465)
....|.+.+++..+++|.+++|.+||+|||+. +||+|++++.+++++.... +..+ ..+...+|++
T Consensus 37 ~~~~~~~~~~~~~~~~g~~~~~~~~~~YL~l~----------~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~ 106 (407)
T PRK07179 37 VNKNWNGKHLVLGKTPGPDAIILQSNDYLNLS----------GHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEK 106 (407)
T ss_pred hccCcCCceEEeecCCCCcEEEeecCCccCCC----------CCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHH
Confidence 44457788999999999999999999999986 6899999999999875211 2222 2346889999
Q ss_pred HHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCc
Q 012368 148 RLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGV 227 (465)
Q Consensus 148 ~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (465)
+|+++++.+.+++++||++|+..+++.+.. +++.|++.... |..........+ ..+
T Consensus 107 ~la~~~g~~~~~~~~sG~~An~~~l~~l~~-----------~g~~v~~~~~~-h~s~~~~~~~~g------------~~~ 162 (407)
T PRK07179 107 KLAAFTGFESCLLCQSGWAANVGLLQTIAD-----------PNTPVYIDFFA-HMSLWEGVRAAG------------AQA 162 (407)
T ss_pred HHHHHhCCCcEEEECCHHHHHHHHHHHhCC-----------CCCEEEEECCc-CHHHHHHHHHCC------------CeE
Confidence 999999988889999999999999997652 46666665433 333322211111 122
Q ss_pred eEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC--CCCCCccccccccC
Q 012368 228 NFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG--LGRTGYLWAHEHYG 305 (465)
Q Consensus 228 ~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g--~gr~g~~~~~~~~~ 305 (465)
..++++|+++|+++++++++++|+++++++++|.+.+ +++|.++|++||++||+||+|+. +|++|.++ ...++
T Consensus 163 ~~~~~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~p----l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~-~~~~~ 237 (407)
T PRK07179 163 HPFRHNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAP----LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGL-VAELG 237 (407)
T ss_pred EEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCcccc----HHHHHHHHHHcCCEEEEECcccccCcCCCCCch-HHhcC
Confidence 3345579999999997545788999999999998877 89999999999999999999973 33344432 34455
Q ss_pred Cc--ccEE--EecccCCCccceeeEEeCHHHHhhccCC----CCcCCCCChHHHHHHHHHHHHHhcC-chHHHHHHHHHH
Q 012368 306 IF--PDIM--TLAKPLAGGLPIGAALVTEKVASAINYG----DHGSTFAGSPLVCNAAIAVLDKISN-PAFLASVSKKGH 376 (465)
Q Consensus 306 ~~--pdi~--t~sK~lg~G~~iG~v~~~~~i~~~~~~~----~~~~t~~~~~~~~~aa~a~L~~~~~-~~~~~~~~~~~~ 376 (465)
+. +|++ +++|++++ |+|++++++++++.+... .+++|+ ++..++++.++++.+.. ++..++++++.+
T Consensus 238 ~~~~vdi~~~S~sK~~g~--~~G~l~~~~~~~~~~~~~~~~~~~~~t~--~~~~~aa~~aal~~~~~~~~~~~~l~~~~~ 313 (407)
T PRK07179 238 LTSRVHFITASLAKAFAG--RAGIITCPRELAEYVPFVSYPAIFSSTL--LPHEIAGLEATLEVIESADDRRARLHANAR 313 (407)
T ss_pred CCCCCCEEEeechHhhhc--cCeEEEeCHHHHHHHHHhCcCeeeCCCC--CHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 53 4775 46899964 799999999988777522 233333 34555566677877654 357788888888
Q ss_pred HHHHHHHHHHHcCCCceeeeccceEEEEEecC--ChHHHHHHHHHCCceEe----ecCC--CCEEEEecCCCCcHHHHHH
Q 012368 377 YFKETLKQKLARNPHVKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLVL----TAGK--GNVVRLVPPLIISEQELDQ 448 (465)
Q Consensus 377 ~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~l~~~Gv~v~----~~~~--~~~lRi~~~~~~t~e~i~~ 448 (465)
++++.|.++ .+ .+.+.+.++++.++. ....+.+.|.++||++. |... .+.+||+++..+|++|+++
T Consensus 314 ~l~~~L~~~--g~----~v~~~~~i~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~ 387 (407)
T PRK07179 314 FLREGLSEL--GY----NIRSESQIIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDR 387 (407)
T ss_pred HHHHHHHHc--CC----CCCCCCCEEEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHH
Confidence 888888764 22 223567888887742 34567888999999743 2211 3689999999999999999
Q ss_pred HHHHHHHHHHHh
Q 012368 449 AVEILCKTLPVL 460 (465)
Q Consensus 449 ~l~~l~~~l~~~ 460 (465)
++++|++++++.
T Consensus 388 ~~~~l~~~~~~~ 399 (407)
T PRK07179 388 VLEVCREARDEV 399 (407)
T ss_pred HHHHHHHHHHhh
Confidence 999999988764
No 93
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=3.3e-32 Score=272.79 Aligned_cols=337 Identities=21% Similarity=0.159 Sum_probs=244.7
Q ss_pred eEEEeeeccEEEeCCCCEEEecccCcccccCCC-CCHHHHHHHHHHHhhccccc-----CCCCCHHHHHHHHHHHhhcCC
Q 012368 82 VVLASGKGCKLYDAEGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVS-----NMYYSIPQIELAKRLVACSFA 155 (465)
Q Consensus 82 ~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~-----~~~~~~~~~~la~~l~~~~~~ 155 (465)
.++.+++|+++|+ +|++|||+.++. ++|| ++|+|++++.+++....... ..+..+...+++++++++++.
T Consensus 24 ~~~~~~~g~~~~~-~g~~~id~~~~~---~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~ 99 (385)
T PRK05958 24 RPREGGAGRWLVV-DGRRMLNFASND---YLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGA 99 (385)
T ss_pred cccccCCCceeEe-CCceEEEeeCCC---cccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC
Confidence 3567999999997 999999999974 4787 78999999999997643211 123456688999999999986
Q ss_pred CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCH
Q 012368 156 DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNI 235 (465)
Q Consensus 156 ~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 235 (465)
+.++++++|++++..+++.+. + +++.|++.++.| +.......+.+ ..+..++.+|+
T Consensus 100 ~~~i~~~~g~~~~~~~l~~~~---~--------~gd~V~~~~~~~-~~~~~~~~~~g------------~~~~~~~~~d~ 155 (385)
T PRK05958 100 ERALLFSSGYAANLAVLTALA---G--------KGDLIVSDKLNH-ASLIDGARLSR------------ARVRRYPHNDV 155 (385)
T ss_pred CcEEEECcHHHHHHHHHHHhC---C--------CCCEEEEeCccC-HHHHHHHHhcC------------CceEEeCCCCH
Confidence 677778889999988776543 2 578888877665 44333332221 12334556689
Q ss_pred HHHHhhcCCC--CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC--CCCCCccccc-cccCCccc-
Q 012368 236 EATRKLIQPG--KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG--LGRTGYLWAH-EHYGIFPD- 309 (465)
Q Consensus 236 ~~le~~l~~~--~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g--~gr~g~~~~~-~~~~~~pd- 309 (465)
++++++++.. ++++++++++++.+|...+ +++|+++|++||++||+||+|.. +++.|..+.. ......+|
T Consensus 156 ~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~----l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~ 231 (385)
T PRK05958 156 DALEALLAKWRAGRALIVTESVFSMDGDLAP----LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDV 231 (385)
T ss_pred HHHHHHHHhccCCCeEEEEEecccCCCCcCC----HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCce
Confidence 9999999742 4788899998888887655 99999999999999999999953 3334432211 11222455
Q ss_pred --EEEecccCCCccceeeEEeCHHHHhhccCC--CCcCCCCChHHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHH
Q 012368 310 --IMTLAKPLAGGLPIGAALVTEKVASAINYG--DHGSTFAGSPLVCNAAIAVLDKISN-PAFLASVSKKGHYFKETLKQ 384 (465)
Q Consensus 310 --i~t~sK~lg~G~~iG~v~~~~~i~~~~~~~--~~~~t~~~~~~~~~aa~a~L~~~~~-~~~~~~~~~~~~~l~~~l~~ 384 (465)
+.++||++++ +.|++++++++++.+... .+..+.+.+++.++++.++|+.+.+ +...+++.++++++.+.|++
T Consensus 232 i~~~s~sK~~~~--~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~ 309 (385)
T PRK05958 232 ILVGTLGKALGS--SGAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRA 309 (385)
T ss_pred EEEEechhhccc--CCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 5689999974 338899999888876432 2333445778888888899987755 36777888888888888776
Q ss_pred HHHcCCCceeeeccceEEEEEecC--ChHHHHHHHHHCCceEeecC------CCCEEEEecCCCCcHHHHHHHHHHHHHH
Q 012368 385 KLARNPHVKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAG------KGNVVRLVPPLIISEQELDQAVEILCKT 456 (465)
Q Consensus 385 ~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~l~~~Gv~v~~~~------~~~~lRi~~~~~~t~e~i~~~l~~l~~~ 456 (465)
+ .. ..+++.|.++++.++. ...++.+.|.++||.+.+.. ..+++|++++..++++++++++++|+++
T Consensus 310 ~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 310 L--GF---QLMDSQSAIQPLIVGDNERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred c--CC---CcCCCCCCEEEEEeCCHHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 4 22 2234567888888742 45679999999999997531 1268999999999999999999999875
Q ss_pred H
Q 012368 457 L 457 (465)
Q Consensus 457 l 457 (465)
+
T Consensus 385 ~ 385 (385)
T PRK05958 385 L 385 (385)
T ss_pred C
Confidence 3
No 94
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-32 Score=270.09 Aligned_cols=339 Identities=17% Similarity=0.139 Sum_probs=244.0
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhcc--cccCCCCCHHHHHHHHHHHhhcC----CC-eEEecCCHHHHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLT--HVSNMYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEANEA 170 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~la~~l~~~~~----~~-~v~~~~sG~eA~~~ 170 (465)
.+.||+..|.+.. ..++.+++++.+++.... ++...+..+.++++++++.+.++ ++ .|++|+|++||+..
T Consensus 28 ~~vi~l~iG~Pd~---~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~ 104 (393)
T COG0436 28 EDVIDLSIGEPDF---PTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFL 104 (393)
T ss_pred CCEEEeCCCCCCC---CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHH
Confidence 4688888876632 267889999999988753 22333344557777777777765 44 49999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCC-ceEeeCCCHHHHHhhcCCCCeEE
Q 012368 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPG-VNFVEYGNIEATRKLIQPGKTAA 249 (465)
Q Consensus 171 al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~le~~l~~~~~a~ 249 (465)
++.+.. +++|+||+++|.|..+.......++.+... ++... ..+. .|+++|+++++++..++
T Consensus 105 ~~~a~~-----------~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v----~l~~~~~~f~--~d~~~l~~~i~~ktk~i 167 (393)
T COG0436 105 AFLALL-----------NPGDEVLIPDPGYPSYEAAVKLAGGKPVPV----PLDEEENGFK--PDLEDLEAAITPKTKAI 167 (393)
T ss_pred HHHHhc-----------CCCCEEEEeCCCCcCHHHHHHhcCCEEEEE----eCCcCccCCc--CCHHHHHhhcCccceEE
Confidence 999777 379999999999998887777666655432 21111 1122 28999999999755666
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc-cc-cccccC---CcccEEEecccCCC-ccce
Q 012368 250 VFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LW-AHEHYG---IFPDIMTLAKPLAG-GLPI 323 (465)
Q Consensus 250 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~-~~-~~~~~~---~~pdi~t~sK~lg~-G~~i 323 (465)
++++|+||+|. +++++++++|.++|++||++||+||+|.+|.+.|. .. ..+..+ ....+-+|||.++. |||+
T Consensus 168 ~ln~P~NPTGa--v~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRv 245 (393)
T COG0436 168 ILNSPNNPTGA--VYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRI 245 (393)
T ss_pred EEeCCCCCcCc--CCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccce
Confidence 67788888874 46999999999999999999999999999977773 22 222222 22334479999996 9999
Q ss_pred eeEEeC-HHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeee-ccceE
Q 012368 324 GAALVT-EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVR-GLGLI 401 (465)
Q Consensus 324 G~v~~~-~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~g~~ 401 (465)
||++++ +++++.+.......+++.+.++|.|+.++|+.-.+.+..+..++..+..++.+.+.+.+.+.+.... ..|.|
T Consensus 246 G~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~ 325 (393)
T COG0436 246 GWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAF 325 (393)
T ss_pred eEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeE
Confidence 999999 8888887655566778899999999999998542223444444444444555555555555444444 44555
Q ss_pred -EEEEec--CChHHHHHHHHH-CCceEeecCC------CCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 402 -IGIEFD--VSATPVVDACRD-SGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 402 -~~i~~~--~~~~~~~~~l~~-~Gv~v~~~~~------~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
++..++ .+..+|+..|++ .||.+.|+.. .+++|++ +..++++++++++++.++++..
T Consensus 326 Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis--~~~~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 326 YLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLS--LATSEETLEEALRRLARFLAEY 392 (393)
T ss_pred EEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEE--EecCHHHHHHHHHHHHHHHHhc
Confidence 445554 477899999886 5899998632 2578884 5667799999999999988754
No 95
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=1.3e-31 Score=268.46 Aligned_cols=342 Identities=17% Similarity=0.184 Sum_probs=242.7
Q ss_pred CCceEEEeeeccEEEeCCCCEEEecccCcccccCCC-CCHHHHHHHHHHHhhcccc-----cCCCCCHHHHHHHHHHHhh
Q 012368 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHV-----SNMYYSIPQIELAKRLVAC 152 (465)
Q Consensus 79 ~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~-----~~~~~~~~~~~la~~l~~~ 152 (465)
+.|.++.+++|+++| .||++||||.++ ..+|| ++|.+++++.+++++.... ...+..+.+.++++++++.
T Consensus 15 ~~~~~~~~~~g~~~~-~~g~~~id~~~~---~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~ 90 (385)
T TIGR01825 15 ISIRVLESAQGPRVR-VNGKEVINLSSN---NYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKF 90 (385)
T ss_pred ccccccccCCCceEE-ECCceEEEeecc---CccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHH
Confidence 468899999999999 999999999885 33788 8999999999998764321 1123456689999999998
Q ss_pred cCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC
Q 012368 153 SFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY 232 (465)
Q Consensus 153 ~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (465)
++.+..+++++|++|+..+++.+. ++++.|++.++.|+... ......+. ....++.
T Consensus 91 ~g~~~~i~~~sG~~a~~~a~~~~~-----------~~gd~vi~~~~~~~~~~-~~~~~~g~------------~~~~~~~ 146 (385)
T TIGR01825 91 KKTEAALVFQSGFNTNQGVLSALL-----------RKGDIVLSDELNHASII-DGLRLTKA------------TKKIYKH 146 (385)
T ss_pred hCCCcEEEECcHHHHHHHHHHHhC-----------CCCCEEEEEccccHHHH-HHHHhcCC------------ceEEeCC
Confidence 885555666778999998888654 15777887776655443 22222211 1122344
Q ss_pred CCHHHHHhhcCC---CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC--CCCCCccccccccCCc
Q 012368 233 GNIEATRKLIQP---GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG--LGRTGYLWAHEHYGIF 307 (465)
Q Consensus 233 ~d~~~le~~l~~---~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g--~gr~g~~~~~~~~~~~ 307 (465)
.|++++++.++. .++++|+++++++.+|.+.+ +++|.++|++||+++|+||+|+. +++.|.. ....+++.
T Consensus 147 ~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~ 221 (385)
T TIGR01825 147 ADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAP----LPEIVELAERYGAVTYVDDAHGSGVMGEAGRG-TVHHFGLE 221 (385)
T ss_pred CCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccC----HHHHHHHHHHhCCEEEEECcccccCcCCCCCc-cHhhcCCC
Confidence 588888887752 25788889998888887765 89999999999999999999964 3333432 22233333
Q ss_pred ----ccEEEecccCCCccceeeEEeCHHHHhhccCCCC--cCCCCChHHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHH
Q 012368 308 ----PDIMTLAKPLAGGLPIGAALVTEKVASAINYGDH--GSTFAGSPLVCNAAIAVLDKISN-PAFLASVSKKGHYFKE 380 (465)
Q Consensus 308 ----pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~--~~t~~~~~~~~~aa~a~L~~~~~-~~~~~~~~~~~~~l~~ 380 (465)
..+.+|||++++ +.||+++++++++.+..... ..+...+++.++++.++++.+.+ .+..+++.++++++.+
T Consensus 222 ~~~~i~~~s~sK~~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~ 299 (385)
T TIGR01825 222 DKVDIQVGTLSKAIGV--VGGYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKA 299 (385)
T ss_pred cCCcEEEEeccHHhhc--CCCEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 335689999964 44889999999888754321 11223567888888888887643 4577888888888888
Q ss_pred HHHHHHHcCCCceeeeccceEEEEEecC--ChHHHHHHHHHCCceEeecC------CCCEEEEecCCCCcHHHHHHHHHH
Q 012368 381 TLKQKLARNPHVKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAG------KGNVVRLVPPLIISEQELDQAVEI 452 (465)
Q Consensus 381 ~l~~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~l~~~Gv~v~~~~------~~~~lRi~~~~~~t~e~i~~~l~~ 452 (465)
.|.++ .++. ..+.+.++.+.++. ...++++.|+++||.+.+.. ....+|++|++.++++++++++++
T Consensus 300 ~L~~~--g~~~---~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~ 374 (385)
T TIGR01825 300 GLGKL--GYDT---GGSETPITPVVIGDEKAAQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDA 374 (385)
T ss_pred HHHHc--CCCC---CCCCCCEEEEEECCHHHHHHHHHHHHHCCcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHH
Confidence 88764 2322 22334455555532 35679999999999885321 126799999999999999999999
Q ss_pred HHHHHHHh
Q 012368 453 LCKTLPVL 460 (465)
Q Consensus 453 l~~~l~~~ 460 (465)
|+++++++
T Consensus 375 l~~~~~~~ 382 (385)
T TIGR01825 375 YEKVGKEL 382 (385)
T ss_pred HHHHHHHh
Confidence 99988654
No 96
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=100.00 E-value=1e-31 Score=268.16 Aligned_cols=327 Identities=16% Similarity=0.238 Sum_probs=243.3
Q ss_pred EecccCcccccCCC-CCHHHHHHHHHHHhhccccc-----CCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHH
Q 012368 101 LDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVS-----NMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKF 174 (465)
Q Consensus 101 lD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~-----~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~ 174 (465)
|||+++.+ ||. +||++++++.+++++++.++ .++......+|+++++++++.+..++++||+.|+..++..
T Consensus 1 ~~f~s~dy---Lgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~ 77 (392)
T PLN03227 1 LNFATHDF---LSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTESAILYSDGASTTSSTVAA 77 (392)
T ss_pred CCCcCcCc---cCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHH
Confidence 46777665 665 88999999999998743221 1122345889999999999977888888999999888776
Q ss_pred HHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcC---C-------
Q 012368 175 ARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ---P------- 244 (465)
Q Consensus 175 a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~---~------- 244 (465)
.. .++|.|++.++.|.+...+. .+.. ..+..++++|++++++.++ +
T Consensus 78 l~-----------~~GD~Vl~~~~~h~s~~~~~-~l~~------------~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~ 133 (392)
T PLN03227 78 FA-----------KRGDLLVVDRGVNEALLVGV-SLSR------------ANVRWFRHNDMKDLRRVLEQVRAQDVALKR 133 (392)
T ss_pred hC-----------CCCCEEEEeccccHHHHHHH-HHcC------------CeEEEeCCCCHHHHHHHHHHhhhhcccccc
Confidence 43 26888998888875443222 2111 2344567777776666442 1
Q ss_pred ---CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc--CCCCCCccccccccCCcc----cEEEecc
Q 012368 245 ---GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC--GLGRTGYLWAHEHYGIFP----DIMTLAK 315 (465)
Q Consensus 245 ---~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~--g~gr~g~~~~~~~~~~~p----di~t~sK 315 (465)
.++.+|++||+++++|.+++ +++|+++|++||+++|+||+|+ .+|++|. +..+++++.| |++++|+
T Consensus 134 ~~~~~t~~vi~E~v~~~~G~i~~----l~~i~~l~~~~g~~livDe~~~~g~~g~~G~-g~~~~~g~~p~~~~Div~~sl 208 (392)
T PLN03227 134 KPTDQRRFLVVEGLYKNTGTLAP----LKELVALKEEFHYRLILDESFSFGTLGKSGR-GSLEHAGLKPMVHAEIVTFSL 208 (392)
T ss_pred ccCCCcEEEEEcCCcCCCCcccC----HHHHHHHHHHcCCEEEEECcccccccCCCCC-cHHHHcCCCCCCCceEEEeec
Confidence 24688999999999998877 9999999999999999999997 2344444 5678889988 9998774
Q ss_pred cCCCccceeeEEeCHHHHhhccCCCCcCCCCCh--HHHHHHHHHHHHH-hcCchHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 012368 316 PLAGGLPIGAALVTEKVASAINYGDHGSTFAGS--PLVCNAAIAVLDK-ISNPAFLASVSKKGHYFKETLKQKLARNPHV 392 (465)
Q Consensus 316 ~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~--~~~~~aa~a~L~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 392 (465)
+-+.|.+.|++++++++++.+....++.+|+++ |+.++|+.+++.. ++.+++.++++++++++++.|++ ..++.+
T Consensus 209 sk~~g~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~--~~~~~~ 286 (392)
T PLN03227 209 ENAFGSVGGMTVGSEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTN--SSHPYA 286 (392)
T ss_pred hhhhhccCcEEecCHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh--cCCccc
Confidence 433356678888999998877655566778775 7788888877755 45678899999999999999986 355655
Q ss_pred eeeec--------cceEEEEEecCC-----------hHHHHHHHHHCCceEeecC----------CCCEEEEecCCCCcH
Q 012368 393 KDVRG--------LGLIIGIEFDVS-----------ATPVVDACRDSGLLVLTAG----------KGNVVRLVPPLIISE 443 (465)
Q Consensus 393 ~~~~~--------~g~~~~i~~~~~-----------~~~~~~~l~~~Gv~v~~~~----------~~~~lRi~~~~~~t~ 443 (465)
..+++ .|.++.+++... ..++.+.|+++|+++.+.+ +...+|++++..+|+
T Consensus 287 ~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~ 366 (392)
T PLN03227 287 LKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTR 366 (392)
T ss_pred cccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCH
Confidence 55555 356788888321 2478889999999986422 135689999999999
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 012368 444 QELDQAVEILCKTLPVLD 461 (465)
Q Consensus 444 e~i~~~l~~l~~~l~~~~ 461 (465)
+||++++++|+++++++.
T Consensus 367 eei~~~~~~l~~~~~~~~ 384 (392)
T PLN03227 367 EDIDKLLTVLGEAVEAIL 384 (392)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999988753
No 97
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=2.5e-31 Score=267.62 Aligned_cols=342 Identities=18% Similarity=0.200 Sum_probs=242.5
Q ss_pred ceEEEeeeccEEEeCCCCEEEecccCcccccCCC-CCHHHHHHHHHHHhhcccccC-----CCCCHHHHHHHHHHHhhcC
Q 012368 81 PVVLASGKGCKLYDAEGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVSN-----MYYSIPQIELAKRLVACSF 154 (465)
Q Consensus 81 p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~la~~l~~~~~ 154 (465)
+..+++++|.++||.+|++||||+++. ++|| ++|.+.+++.+++++..+.+. .+..+.+.++++++++.++
T Consensus 25 ~~~~~~~~~~~~~~~~g~~~i~l~~~~---~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g 101 (397)
T PRK06939 25 ERVITSPQGADITVADGKEVINFCANN---YLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLG 101 (397)
T ss_pred cccccCCCCceEEecCCCeEEEeeccC---ccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhC
Confidence 457789999999999999999999864 3677 789999999999876433211 1234567899999999988
Q ss_pred CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCC
Q 012368 155 ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGN 234 (465)
Q Consensus 155 ~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 234 (465)
.+..+++++|++++..+++.+. .+++.|++.+|+|++........+ ..+..++.+|
T Consensus 102 ~~~~i~~tsG~~a~~~~~~~l~-----------~~gd~vi~~~~~~~~~~~~~~~~~-------------~~~~~~~~~d 157 (397)
T PRK06939 102 TEDAILYSSCFDANGGLFETLL-----------GKEDAIISDALNHASIIDGVRLCK-------------AKRYRYANND 157 (397)
T ss_pred CCcEEEEcChHHHHHHHHHHhC-----------CCCCEEEEEhhhhHHHHHHHHhcC-------------CceEEeCCCC
Confidence 4444555556999999887654 268999999999977654332221 1223344568
Q ss_pred HHHHHhhcCC---C--CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CC-CCCCccccccccCC-
Q 012368 235 IEATRKLIQP---G--KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC-GL-GRTGYLWAHEHYGI- 306 (465)
Q Consensus 235 ~~~le~~l~~---~--~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~-gr~g~~~~~~~~~~- 306 (465)
++++++.++. . ++++|+++++++..|...+ +++|.++|++||++||+||+|+ |+ +..|.. ....+++
T Consensus 158 ~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~----~~~l~~la~~~~~~li~De~~~~g~~~~~~~~-~~~~~~~~ 232 (397)
T PRK06939 158 MADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP----LPEICDLADKYDALVMVDDSHAVGFVGENGRG-TVEHFGVM 232 (397)
T ss_pred HHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC----HHHHHHHHHHhCCEEEEECcccccCcCCCCCC-HHHHcCCC
Confidence 9999888752 2 5678888888888777544 9999999999999999999995 32 223321 2233343
Q ss_pred -cccEE--EecccCCCccceeeEEeCHHHHhhccCCCCcC--CCCChHHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHH
Q 012368 307 -FPDIM--TLAKPLAGGLPIGAALVTEKVASAINYGDHGS--TFAGSPLVCNAAIAVLDKISN-PAFLASVSKKGHYFKE 380 (465)
Q Consensus 307 -~pdi~--t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~--t~~~~~~~~~aa~a~L~~~~~-~~~~~~~~~~~~~l~~ 380 (465)
.+|++ ++||++++ +|+||+++++++++.+....... +.+.++..++++.++++.+.+ +++.++++++.+++++
T Consensus 233 ~~~~i~~~S~sK~~~g-~r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~ 311 (397)
T PRK06939 233 DRVDIITGTLGKALGG-ASGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFRE 311 (397)
T ss_pred CCCcEEEEECHHHhCc-cCceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 35666 78999964 59999999999988876432211 222346667777888887643 3566777777777777
Q ss_pred HHHHHHHcCCCceeeeccceEEEEEec--CChHHHHHHHHHCCceEeecC-----C-CCEEEEecCCCCcHHHHHHHHHH
Q 012368 381 TLKQKLARNPHVKDVRGLGLIIGIEFD--VSATPVVDACRDSGLLVLTAG-----K-GNVVRLVPPLIISEQELDQAVEI 452 (465)
Q Consensus 381 ~l~~~~~~~~~~~~~~~~g~~~~i~~~--~~~~~~~~~l~~~Gv~v~~~~-----~-~~~lRi~~~~~~t~e~i~~~l~~ 452 (465)
.|++. .+. ...+.+.++.+.+. .+..++++.|+++||.+.+.. . .+.+|+++++.++++++++++++
T Consensus 312 ~L~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~ 386 (397)
T PRK06939 312 GMTAA--GFT---LGPGEHPIIPVMLGDAKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDA 386 (397)
T ss_pred HHHHc--CCC---cCCCCCCEEEEEECCHHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHH
Confidence 77653 121 22345666655553 235779999999999887531 1 25799999998999999999999
Q ss_pred HHHHHHHh
Q 012368 453 LCKTLPVL 460 (465)
Q Consensus 453 l~~~l~~~ 460 (465)
|+++++++
T Consensus 387 L~~~~~~~ 394 (397)
T PRK06939 387 FEKVGKEL 394 (397)
T ss_pred HHHHHHHh
Confidence 99988764
No 98
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=3.6e-31 Score=266.01 Aligned_cols=344 Identities=19% Similarity=0.200 Sum_probs=247.1
Q ss_pred CCceEEEeeeccEEEeCCCCEEEecccCcccccCCC-CCHHHHHHHHHHHhhcccc--cCC---CCCHHHHHHHHHHHhh
Q 012368 79 RAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHV--SNM---YYSIPQIELAKRLVAC 152 (465)
Q Consensus 79 ~~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~--~~~---~~~~~~~~la~~l~~~ 152 (465)
+.|..+.+++|.++++.+|++||||+++.+ ||+ .+|++++++.+++.+.+.. +.. +..+...++++.++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~---lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~ 95 (393)
T TIGR01822 19 KSERIITSPQGADIRVADGREVLNFCANNY---LGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAF 95 (393)
T ss_pred CcccccccCCCceEEecCCceEEEeeCCCc---cccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHH
Confidence 567788899999999999999999999854 677 5899999999998874221 111 2244578999999999
Q ss_pred cCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC
Q 012368 153 SFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY 232 (465)
Q Consensus 153 ~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (465)
++.+.+++++||++|+..++..+. .++|.|++.++.|++.......... ....++.
T Consensus 96 ~g~~~~ii~~~~~~a~~~~~~~l~-----------~~gd~vi~~~~~~~s~~~~~~~~~~-------------~~~~~~~ 151 (393)
T TIGR01822 96 LGTEDTILYASCFDANGGLFETLL-----------GAEDAIISDALNHASIIDGVRLCKA-------------KRYRYAN 151 (393)
T ss_pred hCCCcEEEECchHHHHHHHHHHhC-----------CCCCEEEEeccccHHHHHHHHhcCC-------------ceEEeCC
Confidence 997788888999999998777553 1688999998888765543322111 1122345
Q ss_pred CCHHHHHhhcCC---C--CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc--ccccccC
Q 012368 233 GNIEATRKLIQP---G--KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL--WAHEHYG 305 (465)
Q Consensus 233 ~d~~~le~~l~~---~--~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~--~~~~~~~ 305 (465)
+|++++++++++ . ++++|+++++++++|.+.+ +++|.++|++||++||+||+|. +|..|.. ......+
T Consensus 152 ~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~----l~~i~~la~~~~~~li~De~~~-~g~~~~~~~~~~~~~~ 226 (393)
T TIGR01822 152 NDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP----LDEICDLADKYDALVMVDECHA-TGFLGPTGRGSHELCG 226 (393)
T ss_pred CCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC----HHHHHHHHHHcCCEEEEECCcc-ccCcCCCCCchHHhcC
Confidence 799999998863 2 5778889988888887765 9999999999999999999994 3333221 1122233
Q ss_pred C--cccEE--EecccCCCccceeeEEeCHHHHhhccCCCCcCCC--CChHHHHHHHHHHHHHhcC-chHHHHHHHHHHHH
Q 012368 306 I--FPDIM--TLAKPLAGGLPIGAALVTEKVASAINYGDHGSTF--AGSPLVCNAAIAVLDKISN-PAFLASVSKKGHYF 378 (465)
Q Consensus 306 ~--~pdi~--t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~--~~~~~~~~aa~a~L~~~~~-~~~~~~~~~~~~~l 378 (465)
+ .+|++ ++||+++ |+|+||+++++++++.+........+ +.++..++++.++|+.++. ++..++++++.+++
T Consensus 227 ~~~~~di~~~s~sK~l~-g~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l 305 (393)
T TIGR01822 227 VMGRVDIITGTLGKALG-GASGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYF 305 (393)
T ss_pred CCCCCeEEEEEChHHhh-CCCcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 3 35666 7899987 47999999999998887643222222 2356667778888877643 45677888888888
Q ss_pred HHHHHHHHHcCCCceeeeccceEEEEEec--CChHHHHHHHHHCCceEeecC------CCCEEEEecCCCCcHHHHHHHH
Q 012368 379 KETLKQKLARNPHVKDVRGLGLIIGIEFD--VSATPVVDACRDSGLLVLTAG------KGNVVRLVPPLIISEQELDQAV 450 (465)
Q Consensus 379 ~~~l~~~~~~~~~~~~~~~~g~~~~i~~~--~~~~~~~~~l~~~Gv~v~~~~------~~~~lRi~~~~~~t~e~i~~~l 450 (465)
++.|++. .+.. ..+.+.++.+.+. ....++++.|+++||++.... ....+|+++++.+|++||++++
T Consensus 306 ~~~L~~~--g~~~---~~~~~~~~~i~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~ 380 (393)
T TIGR01822 306 RERMEAA--GFDI---KPADHPIIPVMLYDAVLAQRFARRLLEEGIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAV 380 (393)
T ss_pred HHHHHHc--CCCC---CCCCCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHH
Confidence 8877653 2221 1223455555552 235679999999999986321 1146999999999999999999
Q ss_pred HHHHHHHHHh
Q 012368 451 EILCKTLPVL 460 (465)
Q Consensus 451 ~~l~~~l~~~ 460 (465)
++|+++++++
T Consensus 381 ~~l~~~~~~~ 390 (393)
T TIGR01822 381 EAFTRIGREL 390 (393)
T ss_pred HHHHHHHHHh
Confidence 9999987654
No 99
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=100.00 E-value=3.2e-31 Score=257.61 Aligned_cols=327 Identities=21% Similarity=0.244 Sum_probs=252.2
Q ss_pred ccEEEeCCCCEEEecccCcccccCCC-CCHHHHHHHHHHHhhcccccC-----CCCCHHHHHHHHHHHhhcCCCeEEecC
Q 012368 89 GCKLYDAEGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVSN-----MYYSIPQIELAKRLVACSFADRVFFSN 162 (465)
Q Consensus 89 G~~~~d~dG~~ylD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~la~~l~~~~~~~~v~~~~ 162 (465)
+..++ .+|++++||+||.+ ||. +||++++|+.+++++.+.+.. .+..+.+.+|+++|++++|.+..++.+
T Consensus 31 ~~~~~-~~~~~~~nf~SNdY---LGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~al~f~ 106 (388)
T COG0156 31 GLAIR-ADGRKVLNFCSNDY---LGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEAALLFS 106 (388)
T ss_pred Cccee-cCCceeEeeeccCc---ccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEEc
Confidence 44333 45999999999987 786 899999999999998533211 245667999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhc
Q 012368 163 TGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLI 242 (465)
Q Consensus 163 sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l 242 (465)
||..||..++.... .++.+|+.+.-.|.+......++. ..+..+.+||+++||+++
T Consensus 107 SGy~AN~~~i~~l~------------~~~dli~~D~lnHASiidG~rls~------------a~~~~f~HnD~~~Le~~l 162 (388)
T COG0156 107 SGFVANLGLLSALL------------KKGDLIFSDELNHASIIDGIRLSR------------AEVRRFKHNDLDHLEALL 162 (388)
T ss_pred ccchhHHHHHHHhc------------CCCcEEEEechhhhhHHHHHHhCC------------CcEEEecCCCHHHHHHHH
Confidence 99999999999776 367799999999998877666553 334557889999999999
Q ss_pred CC---C--CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc--cccccccCCcc---cEE-
Q 012368 243 QP---G--KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY--LWAHEHYGIFP---DIM- 311 (465)
Q Consensus 243 ~~---~--~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~--~~~~~~~~~~p---di~- 311 (465)
++ . +...|++|.++++.|.+.| |++|.++|++|+++|++||+|+ +|..|+ .+..+++|+.+ ||+
T Consensus 163 ~~~~~~~~~~~~IvtegVfSMdGdiAp----L~~l~~L~~ky~a~L~VDEAHa-~Gv~G~~GrG~~e~~g~~~~~vdi~~ 237 (388)
T COG0156 163 EEARENGARRKLIVTEGVFSMDGDIAP----LPELVELAEKYGALLYVDEAHA-VGVLGPNGRGLAEHFGLEPEEVDIIV 237 (388)
T ss_pred HhhhccCCCceEEEEeccccCCCCcCC----HHHHHHHHHHhCcEEEEEcccc-ccccCCCCccHHHHhCCCCccceEEE
Confidence 73 1 3689999999999999988 9999999999999999999997 444443 22456667653 333
Q ss_pred -EecccCCC-ccceeeEEeCHHHHhhccCCC--CcCCCCChHHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHHHH
Q 012368 312 -TLAKPLAG-GLPIGAALVTEKVASAINYGD--HGSTFAGSPLVCNAAIAVLDKISN-PAFLASVSKKGHYFKETLKQKL 386 (465)
Q Consensus 312 -t~sK~lg~-G~~iG~v~~~~~i~~~~~~~~--~~~t~~~~~~~~~aa~a~L~~~~~-~~~~~~~~~~~~~l~~~l~~~~ 386 (465)
||||++|+ | |++.+++.+++.+.... ...+-+.+|..++++.++|+.+++ ++..++++++..+++..+...
T Consensus 238 gTlsKAlGs~G---g~v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~- 313 (388)
T COG0156 238 GTLGKALGSSG---GYIAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL- 313 (388)
T ss_pred EEchhhhcccC---ceeeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-
Confidence 89999984 4 88999999999886543 333445678888899999999864 678888999999888554442
Q ss_pred HcCCCceeeeccceEEEEEec--CChHHHHHHHHHCCceEeecCC------CCEEEEecCCCCcHHHHHHHHHHHHHH
Q 012368 387 ARNPHVKDVRGLGLIIGIEFD--VSATPVVDACRDSGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEILCKT 456 (465)
Q Consensus 387 ~~~~~~~~~~~~g~~~~i~~~--~~~~~~~~~l~~~Gv~v~~~~~------~~~lRi~~~~~~t~e~i~~~l~~l~~~ 456 (465)
.++ ..+....++.+.+. ..+.++...|+++||++.+..+ ...+|++++..||++||+.+++.|.++
T Consensus 314 -~~~---~~~s~s~I~pv~~gd~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 314 -GLV---LLPSESPIIPVILGDEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred -CCc---cCCCCCCeeeeEeCCHHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 221 12333444555552 3466788899999999875421 256999999999999999999998764
No 100
>PLN02955 8-amino-7-oxononanoate synthase
Probab=100.00 E-value=6.5e-31 Score=261.05 Aligned_cols=336 Identities=16% Similarity=0.079 Sum_probs=243.8
Q ss_pred CCCEEEecccCcccccCCC-CCHHHHHHHHHHHhhcccccC-----CCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHH
Q 012368 96 EGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVSN-----MYYSIPQIELAKRLVACSFADRVFFSNTGTEANE 169 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~ 169 (465)
.++++++|+++.+ ||. +||++++++.+++++++.+.. .+....+.+|+++|+++++.+.+++++||..||.
T Consensus 100 ~~r~~l~FsSndY---LGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~all~sSGy~AN~ 176 (476)
T PLN02955 100 RFKKLLLFSGNDY---LGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKEDCLVCPTGFAANM 176 (476)
T ss_pred CCceEEEeeccCc---cCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCcEEEECChHHHHH
Confidence 4579999999876 775 899999999999998654321 2344568899999999999999999999999999
Q ss_pred HHHHHHHHHhhhc--CCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcC--CC
Q 012368 170 AAIKFARKFQRHS--NPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ--PG 245 (465)
Q Consensus 170 ~al~~a~~~t~~~--~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~--~~ 245 (465)
.++..+....... .+....+++.+|+.+...|.+....+.++... ....+..++|||+++|+++++ ..
T Consensus 177 ~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~--------~~a~~~~f~HND~~~Le~~L~~~~~ 248 (476)
T PLN02955 177 AAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQ--------GNVEVFVYRHCDMYHLNSLLSSCKM 248 (476)
T ss_pred HHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhcccc--------CCceEEEeCCCCHHHHHHHHHhCCC
Confidence 9998763111000 00000124567888999999887766554210 012355678999999999996 33
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc--cccccccCCcccE----EEecccCCC
Q 012368 246 KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY--LWAHEHYGIFPDI----MTLAKPLAG 319 (465)
Q Consensus 246 ~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~--~~~~~~~~~~pdi----~t~sK~lg~ 319 (465)
+.++|++|+++++.|.+.| +++|.++|++||++||+||+|+. |..|. .+..+++++.+|+ .||||++|.
T Consensus 249 ~~~~Vv~EgV~SmdGdiap----L~eL~~L~~~~ga~LiVDEAH~~-Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~ 323 (476)
T PLN02955 249 KRKVVVTDSLFSMDGDFAP----MEELSQLRKKYGFLLVIDDAHGT-FVCGENGGGVAEEFNCEADVDLCVGTLSKAAGC 323 (476)
T ss_pred CceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCcEEEEcccccC-ceecCCCCcHHHHhCCCCCCcEEEEeCccchhc
Confidence 5689999999999999887 99999999999999999999973 34443 3356677776655 589999973
Q ss_pred ccceeeEEeCHHHHhhccCCCCcCCC--CChHHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHHHHHcCCCceeee
Q 012368 320 GLPIGAALVTEKVASAINYGDHGSTF--AGSPLVCNAAIAVLDKISN-PAFLASVSKKGHYFKETLKQKLARNPHVKDVR 396 (465)
Q Consensus 320 G~~iG~v~~~~~i~~~~~~~~~~~t~--~~~~~~~~aa~a~L~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 396 (465)
+.|++++++++++.+........| +.+|...++++++++.+.. +...++++++.+++++.+ .++.
T Consensus 324 --~GGfi~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~~-----G~~~----- 391 (476)
T PLN02955 324 --HGGFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKALS-----GVDI----- 391 (476)
T ss_pred --cCceeecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc-----CCCC-----
Confidence 447799999998888643322223 3456667778899988744 456677777777776521 2221
Q ss_pred ccceEEEEEec--CChHHHHHHHHHCCceEeecCC------CCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 397 GLGLIIGIEFD--VSATPVVDACRDSGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 397 ~~g~~~~i~~~--~~~~~~~~~l~~~Gv~v~~~~~------~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
...++.+.+. ..+..+.+.|+++||++.+... ...+||+++..||++||+.++++|.++....
T Consensus 392 -~sPI~pI~ig~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~ 462 (476)
T PLN02955 392 -SSPIISLVVGNQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFD 462 (476)
T ss_pred -CCCEEEEEeCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhh
Confidence 1344555553 2345689999999999875422 2469999999999999999999999887654
No 101
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.98 E-value=7.9e-30 Score=253.18 Aligned_cols=330 Identities=19% Similarity=0.185 Sum_probs=233.1
Q ss_pred EeeeccEEEeCCCCEEEecccCcccccCCC-CCHHHHHHHHHHHhhcccccC-----CCCCHHHHHHHHHHHhhcCCCeE
Q 012368 85 ASGKGCKLYDAEGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVSN-----MYYSIPQIELAKRLVACSFADRV 158 (465)
Q Consensus 85 ~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~la~~l~~~~~~~~v 158 (465)
.++.|.++. .+|++||||.++ .++|| +||++++++.+++++...... .+..+...++++.++++++.+..
T Consensus 4 ~~~~~~~~~-~~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~ 79 (360)
T TIGR00858 4 DRGPGPEVV-RDGRRLLNFSSN---DYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTEAA 79 (360)
T ss_pred ccCCCCeEE-ECCceEEecccC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCCE
Confidence 478899997 799999999997 36896 889999999999876432111 12235578899999998885555
Q ss_pred EecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHH
Q 012368 159 FFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEAT 238 (465)
Q Consensus 159 ~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 238 (465)
+++++|++++..+++.+. + +++.|++.+++|....... ...+ ..+..++..|++++
T Consensus 80 i~~~~G~~~~~~~l~~~~---~--------~gd~v~~~~~~~~~~~~~~-~~~g------------~~~~~~~~~d~~~l 135 (360)
T TIGR00858 80 LLFSSGYLANVGVISALV---G--------KGDLILSDALNHASLIDGC-RLSG------------ARVRRYRHNDVEHL 135 (360)
T ss_pred EEECchHHHHHHHHHHhC---C--------CCCEEEEEccccHHHHHHH-HhcC------------CceEEecCCCHHHH
Confidence 566667888887776543 1 5788988888775544322 2111 22334455689999
Q ss_pred HhhcCC---CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc--cccccccCCccc----
Q 012368 239 RKLIQP---GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY--LWAHEHYGIFPD---- 309 (465)
Q Consensus 239 e~~l~~---~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~--~~~~~~~~~~pd---- 309 (465)
++.++. .++++|+++++++.+|...+ +++|.++|++||++||+||+|+. |..+. ......+++.++
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~G~~~~----~~~i~~l~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~~~i 210 (360)
T TIGR00858 136 ERLLEKNRGERRKLIVTDGVFSMDGDIAP----LPQLVALAERYGAWLMVDDAHGT-GVLGEDGRGTLEHFGLKPEPVDI 210 (360)
T ss_pred HHHHHHcccCCCeEEEEeCCccCCCCCcC----HHHHHHHHHHcCcEEEEECcccc-cCcCCCCCchHHhcCCCccCCcE
Confidence 998863 24688888888877776655 89999999999999999999973 33221 111233344333
Q ss_pred -EEEecccCCCccceeeEEeCHHHHhhccCCC--CcCCCCChHHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHHH
Q 012368 310 -IMTLAKPLAGGLPIGAALVTEKVASAINYGD--HGSTFAGSPLVCNAAIAVLDKISN-PAFLASVSKKGHYFKETLKQK 385 (465)
Q Consensus 310 -i~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~--~~~t~~~~~~~~~aa~a~L~~~~~-~~~~~~~~~~~~~l~~~l~~~ 385 (465)
+.++||++++ +.||+++++++++.+.... +..+.+.++..++++.++++.+.. +...++++++.+++.+.|+++
T Consensus 211 ~i~s~sK~~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 288 (360)
T TIGR00858 211 QVGTLSKALGS--YGAYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEAL 288 (360)
T ss_pred EEEechhhhhc--cCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc
Confidence 5689999976 3389999999888775322 222334567777888888886643 356677777888887777663
Q ss_pred HHcCCCceeeeccceEEEEEecC--ChHHHHHHHHHCCceEeecC------CCCEEEEecCCCCcHHHHHHHHHHHH
Q 012368 386 LARNPHVKDVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAG------KGNVVRLVPPLIISEQELDQAVEILC 454 (465)
Q Consensus 386 ~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~l~~~Gv~v~~~~------~~~~lRi~~~~~~t~e~i~~~l~~l~ 454 (465)
+. ...+..+.++++.++. +..++.+.|.++||++.+.. .++++|++++..++++|+++++++|+
T Consensus 289 ----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 289 ----GF-TLMPSCTPIVPVIIGDNASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred ----CC-ccCCCCCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 31 1223457788888742 35689999999999997531 12589999999999999999998873
No 102
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=2.8e-29 Score=253.31 Aligned_cols=329 Identities=18% Similarity=0.200 Sum_probs=232.1
Q ss_pred CCCEEEecccCcccccCCCCCHHHHHHHHHHHhhccccc----CCC-CCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHH
Q 012368 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS----NMY-YSIPQIELAKRLVACSFADRVFFSNTGTEANEA 170 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~----~~~-~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~ 170 (465)
+|+++++|.++.+ ++|| +||+|++|+.+++++..... ..+ ..+...+|+++|+++++.+..++++||++|+..
T Consensus 44 ~~~~~~~~~sn~y-l~l~-~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~~i~~~sG~~a~~~ 121 (410)
T PRK13392 44 GPRRVTIWCSNDY-LGMG-QHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKESALLFTSGYVSNDA 121 (410)
T ss_pred CCceEEEEECCCc-cCCC-CCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCCEEEECcHHHHHHH
Confidence 5789999999765 2344 78999999999998754321 112 234588999999999986677777889999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcC---CCCe
Q 012368 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ---PGKT 247 (465)
Q Consensus 171 al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~---~~~~ 247 (465)
++..+.... +++ +|+.+..+|+.....+...+. .+..++++|.+.+++.++ .+++
T Consensus 122 ~i~~l~~~~---------~g~-~vi~~~~~h~s~~~~~~~~g~------------~~~~~~~~d~~~l~~~l~~~~~~~t 179 (410)
T PRK13392 122 ALSTLGKLL---------PGC-VILSDALNHASMIEGIRRSGA------------EKQVFRHNDLADLEEQLASVDPDRP 179 (410)
T ss_pred HHHHHhcCC---------CCC-EEEEehhhhHHHHHHHHHcCC------------eEEEEeCCCHHHHHHHHHhccCCCC
Confidence 998553211 344 555666788776544333221 223345677777777765 2367
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-C-CCCCCccccccccCC--cccEE--EecccCCCcc
Q 012368 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC-G-LGRTGYLWAHEHYGI--FPDIM--TLAKPLAGGL 321 (465)
Q Consensus 248 a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g-~gr~g~~~~~~~~~~--~pdi~--t~sK~lg~G~ 321 (465)
++|+++++++++|.+.+ +++|.++|++||++||+||+|+ | +|..|.+. ....++ .+|++ ||||++|+
T Consensus 180 ~~v~i~~~~n~tG~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~-~~~~~~~~~~div~~tlsK~~g~-- 252 (410)
T PRK13392 180 KLIAFESVYSMDGDIAP----IEAICDLADRYNALTYVDEVHAVGLYGARGGGI-AERDGLMDRIDMIQGTLAKAFGC-- 252 (410)
T ss_pred EEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCccccCcCCCCCch-hhhccCCCCCcEEEEEChHhhhc--
Confidence 88999998888888776 9999999999999999999998 4 35555433 233343 35666 89999974
Q ss_pred ceeeEEeCHHHHhhccCCCC--cCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHHcCCCceeeecc
Q 012368 322 PIGAALVTEKVASAINYGDH--GSTFAGSPLVCNAAIAVLDKISNP-AFLASVSKKGHYFKETLKQKLARNPHVKDVRGL 398 (465)
Q Consensus 322 ~iG~v~~~~~i~~~~~~~~~--~~t~~~~~~~~~aa~a~L~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 398 (465)
+.||+++++++++.+..... ..+.+.+|+.++++.++|+.+... ...++++++.+++++.|+++ .++ ..++.
T Consensus 253 ~GG~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~---~~~~~ 327 (410)
T PRK13392 253 LGGYIAASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNAN--GIP---VMPSP 327 (410)
T ss_pred ccchhhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCC---CCCCC
Confidence 22888889999887654321 234456778899999999876542 34455677777777777653 222 22445
Q ss_pred ceEEEEEecC--ChHHHHHHHH-HCCceEeecCC------CCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 399 GLIIGIEFDV--SATPVVDACR-DSGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 399 g~~~~i~~~~--~~~~~~~~l~-~~Gv~v~~~~~------~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
+.++.+.++. ...++.+.|+ ++||++.+... ..++|+++++.+|++|+++++++|+++++++
T Consensus 328 ~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 328 SHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 6666565532 3457888887 67999986421 2589999999999999999999999987754
No 103
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=5.8e-29 Score=247.60 Aligned_cols=324 Identities=17% Similarity=0.171 Sum_probs=214.0
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHH----HHHHHHHHHhhcC----CCeEEecCCHHHHHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIP----QIELAKRLVACSF----ADRVFFSNTGTEANEA 170 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~----~~~la~~l~~~~~----~~~v~~~~sG~eA~~~ 170 (465)
..+|+..|.. +++ .+|.+++++.+++.........|+... ++.+++++.+.++ .++|++|+|+++++..
T Consensus 27 ~~i~l~~~~~--~~~-~~~~~~~al~~~l~~~~~~~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~ 103 (368)
T PRK03317 27 VPVRLNTNEN--PYP-PSPALVADIAEAVAEAAAGLNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQ 103 (368)
T ss_pred ceeEecCCCC--CCC-CCHHHHHHHHHHHhhhhhhhccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHH
Confidence 4688887754 555 788999999988754211112333322 4444555444333 6899999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCe-EE
Q 012368 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKT-AA 249 (465)
Q Consensus 171 al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~-a~ 249 (465)
+++++.. +++.|++.+|+|+++...+...+.... . .+...+.. -|+++++++++.+++ .+
T Consensus 104 ~~~~~~~-----------~gd~v~v~~P~y~~~~~~~~~~g~~~~-~---~~~~~~~~----~d~~~l~~~~~~~~~~~i 164 (368)
T PRK03317 104 LLQAFGG-----------PGRTALGFVPSYSMHPIIARGTHTEWV-E---GPRAADFT----LDVDAAVAAIAEHRPDVV 164 (368)
T ss_pred HHHHhcC-----------CCCEEEEeCCChHHHHHHHHhcCCeeE-E---cccCCCCC----CCHHHHHHHHhccCCCEE
Confidence 9987652 688999999999887754433221111 1 01111111 278999999863333 45
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEE---EecccCC-Cccceee
Q 012368 250 VFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM---TLAKPLA-GGLPIGA 325 (465)
Q Consensus 250 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~---t~sK~lg-~G~~iG~ 325 (465)
++++|.|++| .. ++.+ ++.++|+.++++||+||+|.+|++.|........+..|+++ ||||.+| +|+|+||
T Consensus 165 ~l~~p~NPtG-~~-~~~~---~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~ 239 (368)
T PRK03317 165 FLTSPNNPTG-TA-LPLD---DVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGY 239 (368)
T ss_pred EEeCCCCCCC-CC-CCHH---HHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhh
Confidence 5666655554 43 3544 45555555589999999999987665433333334445665 8999998 6999999
Q ss_pred EEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEE-
Q 012368 326 ALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGI- 404 (465)
Q Consensus 326 v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i- 404 (465)
+++++++++.+.... .+++.++++++++.++|+.. +.+.++.++. ...++.+.+.+.+++. ....+.|.|+.+
T Consensus 240 ~~~~~~~~~~l~~~~--~~~~~s~~~~~a~~~~l~~~--~~~~~~~~~~-~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~ 313 (368)
T PRK03317 240 LAAAPAVVDALRLVR--LPYHLSAVTQAAARAALRHA--DELLASVAAL-RAERDRVVAWLRELGL-RVAPSDANFVLFG 313 (368)
T ss_pred hhCCHHHHHHHHhcC--CCCCCCHHHHHHHHHHhhCH--HHHHHHHHHH-HHHHHHHHHHHHHCCC-EeCCCCCcEEEEe
Confidence 999999999886432 46788999999999998743 2333333322 2233444444444442 333445665554
Q ss_pred EecCChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 405 EFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 405 ~~~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
.+ .+..++.+.|+++||++.+.+..+++||+++ +.+++++++++|+++++.
T Consensus 314 ~~-~~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~---~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 314 RF-ADRHAVWQGLLDRGVLIRDVGIPGWLRVTIG---TPEENDAFLAALAEVLAT 364 (368)
T ss_pred cc-CCHHHHHHHHHHCCEEEEeCCCCCeEEEecC---CHHHHHHHHHHHHHHHHH
Confidence 33 3567899999999999988765578999854 678999999999988753
No 104
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.97 E-value=2.6e-28 Score=245.45 Aligned_cols=342 Identities=13% Similarity=0.060 Sum_probs=229.0
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhcc---cccCCCCCHHHHHHHHHHHhhcC----C-CeEEecCCHHHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLT---HVSNMYYSIPQIELAKRLVACSF----A-DRVFFSNTGTEANE 169 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~~----~-~~v~~~~sG~eA~~ 169 (465)
+..+||..+... +++ .+|.+.+++.+.+.... +....+..+.++++++++++.++ + ++|++|+|+++|+.
T Consensus 39 ~~~i~l~~g~~~-~~~-p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~ 116 (405)
T PRK06207 39 GRPVDFSHGDVD-AHE-PTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALF 116 (405)
T ss_pred CCceecCCcCCC-CCC-CCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHH
Confidence 456677766543 333 66788898888776421 11122233457788888887765 4 78999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEE
Q 012368 170 AAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAA 249 (465)
Q Consensus 170 ~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~ 249 (465)
.+++... +++|.|++.+|+|+++...+...+.... ..+.........+ -.|+++|+++++++...+
T Consensus 117 ~~~~~l~-----------~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~-~v~~~~~~~~~~~--~~d~~~l~~~~~~~~k~v 182 (405)
T PRK06207 117 LAVAATV-----------ARGDKVAIVQPDYFANRKLVEFFEGEMV-PVQLDYLSADKRA--GLDLDQLEEAFKAGVRVF 182 (405)
T ss_pred HHHHHhc-----------CCCCEEEEeCCCchhHHHHHHHcCCEEE-EEeccccCcccCC--CcCHHHHHHhhhhcCeEE
Confidence 9988665 2689999999999887754443332211 1000000000000 027899999987544556
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccc-cccc----cCCcccEEEecccCC-Cccce
Q 012368 250 VFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEH----YGIFPDIMTLAKPLA-GGLPI 323 (465)
Q Consensus 250 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~-~~~~----~~~~pdi~t~sK~lg-~G~~i 323 (465)
++++|.|++| .+.+.+.+++|.++|++||++||+||+|..|...|... .... .+...-+.+|||.++ .|+|+
T Consensus 183 ~l~~P~NPTG--~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRi 260 (405)
T PRK06207 183 LFSNPNNPAG--VVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRL 260 (405)
T ss_pred EECCCCCCCC--cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccce
Confidence 7888876666 34588999999999999999999999999875444311 1111 122233447999999 79999
Q ss_pred eeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceee-eccceEE
Q 012368 324 GAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDV-RGLGLII 402 (465)
Q Consensus 324 G~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~ 402 (465)
||+++++++++.+.........+.+.+++.++.++|+. .+.++++..+.....++.+.+.+..++.+... +..|.|+
T Consensus 261 G~ii~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl 338 (405)
T PRK06207 261 GVAFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSE--PDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYL 338 (405)
T ss_pred EEEEcCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEE
Confidence 99999999988886433334455677888888888862 12333333333333445555555555433333 3347888
Q ss_pred EEEec---CChHHHHHHHH-HCCceEeecC-----CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 403 GIEFD---VSATPVVDACR-DSGLLVLTAG-----KGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 403 ~i~~~---~~~~~~~~~l~-~~Gv~v~~~~-----~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
|++++ .+..++++.|+ ++||.+.|+. .++++||+++. +++++++++++|.+++++++
T Consensus 339 ~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~--~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 339 FPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ--DHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred EEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHhh
Confidence 99884 25678999987 6899999863 14689997763 78999999999999998764
No 105
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.97 E-value=2.1e-28 Score=244.62 Aligned_cols=336 Identities=15% Similarity=0.142 Sum_probs=232.6
Q ss_pred CCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCC-HHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHH
Q 012368 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYS-IPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIK 173 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~ 173 (465)
+..+|++..+.. .++ .+|.+.+++.+++..... ..|+. ....++++++++.++ .++|++++|+++|+..+++
T Consensus 27 ~~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~ 101 (380)
T PRK06225 27 DKEMIWMGQNTN--HLG-PHEEVREAMIRCIEEGEY--CKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMR 101 (380)
T ss_pred cCCeEEccCCCC--CCC-CCHHHHHHHHHHHhcCCC--CCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHH
Confidence 456788887643 454 689999999998865321 22322 236788899998887 6789999999999999998
Q ss_pred HHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCC-CCceEeeCCCHHHHHhhcCCCCeEEEEE
Q 012368 174 FARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVM-PGVNFVEYGNIEATRKLIQPGKTAAVFV 252 (465)
Q Consensus 174 ~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~le~~l~~~~~a~vi~ 252 (465)
.+.. +++.|++.+|+|+.+...+...+.... . .+.. .+..+ .-|++++++.+.++..+++++
T Consensus 102 ~~~~-----------~gd~vl~~~p~y~~~~~~~~~~g~~~~-~---v~~~~~~~~~--~~d~~~l~~~~~~~~~~v~l~ 164 (380)
T PRK06225 102 AFLS-----------PGDNAVTPDPGYLIIDNFASRFGAEVI-E---VPIYSEECNY--KLTPELVKENMDENTRLIYLI 164 (380)
T ss_pred HhcC-----------CCCEEEEcCCCCcchHHHHHHhCceEE-e---eccccccCCc--cCCHHHHHhhcCCCceEEEEe
Confidence 7641 578899999999865432222222111 1 0110 00000 127899999987544445567
Q ss_pred cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccccc-ccCCcccEEEecccCC-CccceeeEEeCH
Q 012368 253 EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHE-HYGIFPDIMTLAKPLA-GGLPIGAALVTE 330 (465)
Q Consensus 253 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~-~~~~~pdi~t~sK~lg-~G~~iG~v~~~~ 330 (465)
+|.|++| . .++.+.+++|.++|++||+++|+||+|.+|.. +...... ..+...++.+|||.+| .|+|+||+++++
T Consensus 165 ~p~NptG-~-~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~ 241 (380)
T PRK06225 165 DPLNPLG-S-SYTEEEIKEFAEIARDNDAFLLHDCTYRDFAR-EHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATP 241 (380)
T ss_pred CCCCCCC-c-CCCHHHHHHHHHHHHHCCcEEEEehhHHHHhc-cCCchhhcCCCCEEEEeechhhcCCccceeEEEecCH
Confidence 7766654 3 45888999999999999999999999987632 2211111 1123345678999998 599999999999
Q ss_pred HHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCC--ceeeeccceEEEEEec-
Q 012368 331 KVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPH--VKDVRGLGLIIGIEFD- 407 (465)
Q Consensus 331 ~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~--~~~~~~~g~~~~i~~~- 407 (465)
++++.+... ...+++.|.+++.++.++|+. ..++.+++++..+..++.+.+.+++++. ....++.|.++++.+.
T Consensus 242 ~l~~~~~~~-~~~~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 318 (380)
T PRK06225 242 DLIEVVKSI-VINDLGTNVIAQEAAIAGLKV--KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISE 318 (380)
T ss_pred HHHHHHHHH-HhcccCCCHHHHHHHHHHHhc--chHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEccc
Confidence 999887643 234677888999888888864 2455666666555555556555555432 2223456888888873
Q ss_pred --CChHHHHHHHHHCCceEeecC------CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 408 --VSATPVVDACRDSGLLVLTAG------KGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 408 --~~~~~~~~~l~~~Gv~v~~~~------~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
.+..++.+.|.++||.+.++. ..+++|++++ .+++++++++++|++++.+++.
T Consensus 319 ~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~--~~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 319 AGIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFS--IPREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred ccCCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeC--CCHHHHHHHHHHHHHHHHHhhc
Confidence 367789999999999998752 1257888754 5789999999999999988764
No 106
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=3.6e-29 Score=248.03 Aligned_cols=324 Identities=13% Similarity=0.136 Sum_probs=234.1
Q ss_pred CCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHH
Q 012368 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIK 173 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~ 173 (465)
+++..+|+..|.. ++| .+|.+++++.+.+... ..|+.....+|.+.|+++++ +++|++|+|++|++..+++
T Consensus 27 ~~~~~i~l~~nen--~~~-~~~~v~~a~~~~~~~~----~~Yp~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~ 99 (366)
T PRK01533 27 GDHSFVKLASNEN--PFG-CSPRVLDELQKSWLDH----ALYPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISR 99 (366)
T ss_pred CCCceEEeCCCCC--CCC-CCHHHHHHHHHHHHhc----CcCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH
Confidence 3467899988754 677 6788999998876543 22444446678888888886 7899999999999999988
Q ss_pred HHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEc
Q 012368 174 FARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVE 253 (465)
Q Consensus 174 ~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~e 253 (465)
++.. +++.|++.+|+|.++...+...+.... . .+...+ ..|+++++++++++...+++++
T Consensus 100 ~l~~-----------~gd~vlv~~P~y~~~~~~~~~~g~~v~-~---v~~~~~-----~~d~~~l~~~~~~~~~~v~i~~ 159 (366)
T PRK01533 100 AVLK-----------AGDNIVTAGATFPQYRHHAIIEGCEVK-E---VALNNG-----VYDLDEISSVVDNDTKIVWICN 159 (366)
T ss_pred HhcC-----------CCCEEEEcCCcHHHHHHHHHHcCCEEE-E---eecCCC-----CcCHHHHHHHhCcCCcEEEEeC
Confidence 7652 688999999999888765443332111 1 111111 1278999998875555666777
Q ss_pred ccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc-cccc---cccCCcccEEEecccCC-CccceeeEEe
Q 012368 254 PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LWAH---EHYGIFPDIMTLAKPLA-GGLPIGAALV 328 (465)
Q Consensus 254 p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~-~~~~---~~~~~~pdi~t~sK~lg-~G~~iG~v~~ 328 (465)
|+|++| ...+.+.+++|.++|++++ ++|+||+|.+|...+. .... +..+...-+.+|||.+| .|+|+||+++
T Consensus 160 P~NPTG--~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~ 236 (366)
T PRK01533 160 PNNPTG--TYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVG 236 (366)
T ss_pred CCCCCC--CCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhC
Confidence 877665 3458888999999998876 6777999987643221 1111 11222233447999999 6999999999
Q ss_pred CHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC
Q 012368 329 TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV 408 (465)
Q Consensus 329 ~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~ 408 (465)
++++++.+... ..+++.|.+++.++.++|+ +.++.+++++.....++.+.+.+..++ +...++.|+|+++.++
T Consensus 237 ~~~~~~~l~~~--~~~~~~~~~~q~aa~~~l~---~~~~~~~~~~~~~~~r~~~~~~l~~~g-~~~~~~~~nf~~~~~~- 309 (366)
T PRK01533 237 HEELIEKLNVV--RLPFNVSSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYESFCKENE-IPFYQSQTNFIFLPVE- 309 (366)
T ss_pred CHHHHHHHHHh--cCCCCcCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhCC-CccCCCcCcEEEEeCC-
Confidence 99999988643 2467889999999999985 455666666655555666666665554 3344567999999874
Q ss_pred ChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 409 SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 409 ~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
+..++.+.|+++||.+++. ++++||+ ..+.+++++++++|+++++..+
T Consensus 310 ~~~~~~~~l~~~GI~Vr~~--~~~iRis---~~~~~~~~~l~~al~~~~~~~~ 357 (366)
T PRK01533 310 NGGEIYEACAHAGFIIRPF--PNGVRIT---VGTREQNEGVISVLQQHFENKK 357 (366)
T ss_pred CHHHHHHHHHHCCcEEccC--CCceEEe---CCCHHHHHHHHHHHHHHHHhcc
Confidence 5678999999999999985 3779998 4588999999999999987654
No 107
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.2e-28 Score=244.69 Aligned_cols=319 Identities=18% Similarity=0.172 Sum_probs=222.6
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFAR 176 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~ 176 (465)
+++||.+|.+ ++| .+|.+.+++.+.++...+ ++.....++++.++++++ .++|++|+|+++++..+++...
T Consensus 30 ~~i~l~~n~~--~~~-~~~~v~~a~~~~~~~~~~----~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~ 102 (359)
T PRK03158 30 KIVKLASNEN--PYG-PSPKVKEAIAAHLDELAL----YPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALL 102 (359)
T ss_pred ceEEecCCCC--CCC-CCHHHHHHHHHHHHHhhc----CCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHh
Confidence 6899998865 467 588999999988765322 333446678888888776 6789999999999998887654
Q ss_pred HHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccC
Q 012368 177 KFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQ 256 (465)
Q Consensus 177 ~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~ 256 (465)
. +++.|++.+|+|+++...+...+.... . .+.. +. ..|++++++.++++...+++++|.|
T Consensus 103 ~-----------~gd~v~~~~p~y~~~~~~~~~~g~~~~-~---~~~~-~~----~~d~~~l~~~~~~~~~~v~i~~p~N 162 (359)
T PRK03158 103 N-----------PGTNTVMAEPTFSQYRHNAIIEGAEVR-E---VPLK-DG----GHDLEAMLKAIDEQTKIVWICNPNN 162 (359)
T ss_pred C-----------CCCEEEEcCCCHHHHHHHHHHcCCeEE-E---EecC-CC----CcCHHHHHHhcCCCCCEEEEeCCCC
Confidence 1 688999999999987644333221111 0 1111 00 1278999888875444455566655
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc-ccc---ccccCCcccEEEecccCC-CccceeeEEeCHH
Q 012368 257 GEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LWA---HEHYGIFPDIMTLAKPLA-GGLPIGAALVTEK 331 (465)
Q Consensus 257 ~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~-~~~---~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~ 331 (465)
++ |.+ ++.+.+.++.+.|+ +|+++|+||+|.+|...+. ... .+.++...-+.||||.+| .|+|+||++++++
T Consensus 163 Pt-G~~-~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~ 239 (359)
T PRK03158 163 PT-GTY-VNHEELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEE 239 (359)
T ss_pred CC-CCC-CCHHHHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHH
Confidence 54 443 46666777776664 6999999999987643221 111 122232333458999999 6999999999999
Q ss_pred HHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCChH
Q 012368 332 VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSAT 411 (465)
Q Consensus 332 i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~ 411 (465)
+++.+... ..+++.|++++.++.++|+ +.++.+++++..+..++.+.+.+.+++ +...++.|.++++.+..+..
T Consensus 240 ~~~~~~~~--~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~g~~i~~~~~~~~~ 313 (359)
T PRK03158 240 LIEKLNIA--RPPFNTTRIAQYAAIAALE---DQAFLKECVEKNAEGLEQYYAFCKEYG-LFYYPSQTNFIFVDTGRDAN 313 (359)
T ss_pred HHHHHHHh--cCCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CeeCCCcCcEEEEECCCCHH
Confidence 99888643 2357889999999999886 345555555555555566666555554 33456678899988755678
Q ss_pred HHHHHHHHCCceEeecC---CCCEEEEecCCCCcHHHHHHHHHHHHHH
Q 012368 412 PVVDACRDSGLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKT 456 (465)
Q Consensus 412 ~~~~~l~~~Gv~v~~~~---~~~~lRi~~~~~~t~e~i~~~l~~l~~~ 456 (465)
++++.|+++||.+.++. .++++||+++ +.+++++++++|+++
T Consensus 314 ~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 314 ELFEALLKKGYIVRSGAALGFPTGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred HHHHHHHHCCeEEeeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHh
Confidence 89999999999999862 2478999744 889999999999875
No 108
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.97 E-value=1.7e-28 Score=239.37 Aligned_cols=320 Identities=20% Similarity=0.214 Sum_probs=243.0
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC---CCeEEecCCHHHHHHHHHHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF---ADRVFFSNTGTEANEAAIKFA 175 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~---~~~v~~~~sG~eA~~~al~~a 175 (465)
..+|+.+| -+++| .+|.+++++.+.++.+ +.|+++...++.+.+++.++ .+.|+.+||.+|.+...+++.
T Consensus 23 ~~i~LssN--enP~g-p~~~~~~~~~~~~~~~----~rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~ 95 (356)
T COG0079 23 GIIKLSSN--ENPYG-PPPKVIEAIRAALDKL----NRYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAF 95 (356)
T ss_pred cceeecCC--CCCCC-CCHHHHHHHHHHHHhh----ccCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHh
Confidence 68999988 45788 5689999998887743 45777778899999999887 579999999999999999987
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEccc
Q 012368 176 RKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPI 255 (465)
Q Consensus 176 ~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~ 255 (465)
+. ++++|++..|+|.-+...+...+...... +... .. .|++.+.+.+.++...+++++|+
T Consensus 96 ~~-----------~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v----~~~~-~~----~d~~~~~~~~~~~~~lv~i~nPN 155 (356)
T COG0079 96 VE-----------PGDTVLIPEPTFSMYEIAAQLAGAEVVKV----PLKE-FR----LDLDAILAAIRDKTKLVFLCNPN 155 (356)
T ss_pred hc-----------CCCEEEEcCCChHHHHHHHHhcCCeEEEe----cccc-cc----cCHHHHHHhhhcCCCEEEEeCCC
Confidence 73 67899999999977776555444222111 1111 11 37888888887645678888999
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcc---cEEEecccCC-CccceeeEEeCHH
Q 012368 256 QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFP---DIMTLAKPLA-GGLPIGAALVTEK 331 (465)
Q Consensus 256 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~p---di~t~sK~lg-~G~~iG~v~~~~~ 331 (465)
||+|..+ +.+.++++.+.|.+ +++||+||+|.+|.. . .......-.+ -+-||||++| +|+|+||++++++
T Consensus 156 NPTG~~~--~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~--~-~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~ 229 (356)
T COG0079 156 NPTGTLL--PREELRALLEALPE-GGLVVIDEAYIEFSP--E-SSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPE 229 (356)
T ss_pred CCCCCCC--CHHHHHHHHHhCCC-CcEEEEeCchhhcCC--c-hhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHH
Confidence 9988544 77889999999888 999999999999964 2 1122111122 2348999999 6999999999999
Q ss_pred HHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC-Ch
Q 012368 332 VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV-SA 410 (465)
Q Consensus 332 i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~-~~ 410 (465)
+++.+. .....|+.|.++++++.++|+ +.++.++..+....-+++|.+.+..++.....++.++|+.+++.. .+
T Consensus 230 ~i~~l~--~vr~p~~v~~~a~~aa~aal~---~~~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~aNFvlv~~~~~~~ 304 (356)
T COG0079 230 LIAALN--KVRPPFNVSSPALAAAIAALR---DADYLEESVERIREERERLYAALKALGLFGVFPSQANFVLVRVPDAEA 304 (356)
T ss_pred HHHHHH--HhcCCCCCCHHHHHHHHHHcc---cHHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcEEEEECCCccH
Confidence 999997 455788999999999999997 346666666666666677777777766332566779999998832 25
Q ss_pred HHHHHHHHHCCceEeecCC----CCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 411 TPVVDACRDSGLLVLTAGK----GNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 411 ~~~~~~l~~~Gv~v~~~~~----~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
..+.+.|+++||+++.+.. .+++|++ ..|++|.++++++|.++++.
T Consensus 305 ~~l~~~L~~~giivR~~~~~~~~~~~lRit---vgt~een~~ll~AL~~~~~~ 354 (356)
T COG0079 305 AALAEALLKKGILVRDCSSVGLLPGYLRIT---VGTPEENDRLLAALREVLKG 354 (356)
T ss_pred HHHHHHHHHCCEEEEeCCCCCCCCCeEEEE---eCCHHHHHHHHHHHHHHHhc
Confidence 5799999999999998742 3689998 55889999999999988754
No 109
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.97 E-value=6.2e-28 Score=225.80 Aligned_cols=348 Identities=15% Similarity=0.143 Sum_probs=244.6
Q ss_pred eeccEEEeCCC--CEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC----CCeEEe
Q 012368 87 GKGCKLYDAEG--REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF----ADRVFF 160 (465)
Q Consensus 87 ~~G~~~~d~dG--~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~----~~~v~~ 160 (465)
+..+.-||..+ ..+|-+.-.. +-|. .+|+|++|+.+.++.+.+++.....+...++.++.+++++ .+.|+|
T Consensus 12 ~t~s~KWd~~~g~~DvlPmWVAD--MDf~-~pp~i~~Al~~rvdhGvfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~ 88 (388)
T COG1168 12 GTNSLKWDAHPGNEDVLPMWVAD--MDFP-TPPEIIEALRERVDHGVFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVF 88 (388)
T ss_pred CCCceeccccCCCCCcceeeeec--ccCC-CCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEE
Confidence 33445565554 3444433322 1233 7899999999999987676664444568899999999886 789999
Q ss_pred cCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHh
Q 012368 161 SNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRK 240 (465)
Q Consensus 161 ~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 240 (465)
+++..-++..+++.. |. ++|.|++..|.||.+... ....+......++.-....... |+++||+
T Consensus 89 ~p~VVpgi~~~I~~~---T~--------~gd~Vvi~tPvY~PF~~~-i~~n~R~~i~~pL~~~~~~y~i----D~~~LE~ 152 (388)
T COG1168 89 VPGVVPGISLAIRAL---TK--------PGDGVVIQTPVYPPFYNA-IKLNGRKVIENPLVEDDGRYEI----DFDALEK 152 (388)
T ss_pred cCcchHhHHHHHHHh---Cc--------CCCeeEecCCCchHHHHH-HhhcCcEEEeccccccCCcEEe----cHHHHHH
Confidence 999999999999954 43 799999999999887643 3333333333222211111222 8999999
Q ss_pred hcCCCC-eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCC-cccccccc-----CCcccEEEe
Q 012368 241 LIQPGK-TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTG-YLWAHEHY-----GIFPDIMTL 313 (465)
Q Consensus 241 ~l~~~~-~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g-~~~~~~~~-----~~~pdi~t~ 313 (465)
.+.... ...|+|+|.||.| .++++++|++|.+||.+||+++|+||+|.++-..| +...+... +...-+++-
T Consensus 153 ~~~~~~vkl~iLCnPHNP~G--rvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~sa 230 (388)
T COG1168 153 AFVDERVKLFILCNPHNPTG--RVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSA 230 (388)
T ss_pred HHhcCCccEEEEeCCCCCCC--ccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeec
Confidence 998544 6778899988877 67899999999999999999999999999986666 22221111 112223345
Q ss_pred cccCC-CccceeeEEeC-HHHHhhccC-CCCcCCCCChHHHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHHHHc
Q 012368 314 AKPLA-GGLPIGAALVT-EKVASAINY-GDHGSTFAGSPLVCNAAIAVLDKISN--PAFLASVSKKGHYFKETLKQKLAR 388 (465)
Q Consensus 314 sK~lg-~G~~iG~v~~~-~~i~~~~~~-~~~~~t~~~~~~~~~aa~a~L~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~ 388 (465)
||+++ +|+.+++++.+ +++.+.+.. ....+..+.|.+++.|..++++..+. +++.+.++.+.+++.+.+.+ .
T Consensus 231 SKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~---~ 307 (388)
T COG1168 231 SKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNK---H 307 (388)
T ss_pred cccccchhhhheeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh---h
Confidence 79998 69999988764 555444432 23344556789999999999996543 56667777777777777766 3
Q ss_pred CCCceeeeccceE-EEEEe---cCChHHHHHHHHH-CCceEeecC---C--CCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 389 NPHVKDVRGLGLI-IGIEF---DVSATPVVDACRD-SGLLVLTAG---K--GNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 389 ~~~~~~~~~~g~~-~~i~~---~~~~~~~~~~l~~-~Gv~v~~~~---~--~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
.|.+....+.|.+ .|+++ ..+..++.+.|++ .+|.+.++. . .+++|+ +++++++-+++++++|..+++
T Consensus 308 ~P~v~v~~p~gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~Rl--N~acpr~~L~eal~ri~~al~ 385 (388)
T COG1168 308 LPGVKVTEPQGTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRL--NFACPRAILEEALERLKRALK 385 (388)
T ss_pred CCCcEEecCCCceeeeeeccccCCChHHHHHHHHHhhcEeccCCCccCcCCCceEEE--ecCCCHHHHHHHHHHHHHHHh
Confidence 5666677777876 46777 2455678888885 467776552 1 256777 788999999999999999887
Q ss_pred Hh
Q 012368 459 VL 460 (465)
Q Consensus 459 ~~ 460 (465)
..
T Consensus 386 ~~ 387 (388)
T COG1168 386 KR 387 (388)
T ss_pred cc
Confidence 54
No 110
>PRK07682 hypothetical protein; Validated
Probab=99.97 E-value=3.1e-28 Score=243.31 Aligned_cols=335 Identities=12% Similarity=0.032 Sum_probs=221.5
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHhhccc-c-cCCCCCHHHHHHHHHHHhhcC----CC-eEEecCCHHHHHHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTH-V-SNMYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEANEAA 171 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~-~-~~~~~~~~~~~la~~l~~~~~----~~-~v~~~~sG~eA~~~a 171 (465)
..|+|..+.+ .++ .++.+.+++.+.+..... + ...+..+.++++++++.+.++ .+ +|++|+|+++|+..+
T Consensus 21 ~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 97 (378)
T PRK07682 21 GVISLGVGEP--DFV-TPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVA 97 (378)
T ss_pred CeEEeCCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHH
Confidence 3678887765 344 466788888887754211 1 122233446777777766544 33 799999999999999
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEE
Q 012368 172 IKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVF 251 (465)
Q Consensus 172 l~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi 251 (465)
++.+. .+++.|++.+|+|+++...+...+.... . .+......+ .-|++++++++.++..++++
T Consensus 98 ~~~l~-----------~~gd~vl~~~p~y~~~~~~~~~~g~~~~-~---~~~~~~~~~--~~d~~~l~~~~~~~~~~v~~ 160 (378)
T PRK07682 98 MRAII-----------NPGDEVLIVEPSFVSYAPLVTLAGGVPV-P---VATTLENEF--KVQPAQIEAAITAKTKAILL 160 (378)
T ss_pred HHHhC-----------CCCCEEEEeCCCchhhHHHHHHcCCEEE-E---eecCCccCC--CCCHHHHHhhcCcccEEEEE
Confidence 88664 2689999999999877654433332211 1 011100000 12789999998754445556
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccc-cccC---CcccEEEecccCC-CccceeeE
Q 012368 252 VEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAH-EHYG---IFPDIMTLAKPLA-GGLPIGAA 326 (465)
Q Consensus 252 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~-~~~~---~~pdi~t~sK~lg-~G~~iG~v 326 (465)
++|.|++|. +++.+.+++|.++|++|++++|+||+|.+|.+.+..... ...+ ....+.+|||.++ .|+|+||+
T Consensus 161 ~~p~NPtG~--~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~ 238 (378)
T PRK07682 161 CSPNNPTGA--VLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFI 238 (378)
T ss_pred ECCCCCcCc--CcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhh
Confidence 777666553 558899999999999999999999999988654432111 1112 2233557999999 69999999
Q ss_pred EeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeecc-ceEEEEE
Q 012368 327 LVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGL-GLIIGIE 405 (465)
Q Consensus 327 ~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-g~~~~i~ 405 (465)
++++++++.+.......+++.+++++.++.++|+.. +...+++++..+..++.+.+.+.+++. ....+. |.++|+.
T Consensus 239 ~~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~L~~~~~-~~~~p~g~~~~~~~ 315 (378)
T PRK07682 239 AAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAG--NDDVIRMRDSYRKRRNFFVTSFNEIGL-TCHVPGGAFYAFPS 315 (378)
T ss_pred hcCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCeeEEEEEe
Confidence 999999988864333445677889999998888632 223344444333334444444444432 222333 4556665
Q ss_pred ec---CChHHHHHHHH-HCCceEeecC---C--CCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 406 FD---VSATPVVDACR-DSGLLVLTAG---K--GNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 406 ~~---~~~~~~~~~l~-~~Gv~v~~~~---~--~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
+. .+..++++.|+ ++||.+.|+. . .+++||++. .+++++++++++|+++++++
T Consensus 316 ~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 316 ISSTGLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYA--TSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred ccCCCCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHhhc
Confidence 52 35678998886 6899998863 1 378999765 47899999999999998764
No 111
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.97 E-value=5.7e-28 Score=242.96 Aligned_cols=333 Identities=16% Similarity=0.087 Sum_probs=224.1
Q ss_pred CCEEEecccCcccccCCCCCHHHHHHHHHHHhhcc-ccc-CCCCCHHHHHHHHHHHhhcC----C-CeEEecCCHHHHHH
Q 012368 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLT-HVS-NMYYSIPQIELAKRLVACSF----A-DRVFFSNTGTEANE 169 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~-~~~-~~~~~~~~~~la~~l~~~~~----~-~~v~~~~sG~eA~~ 169 (465)
|.+++||..+.+. ++ .++.+++++.+.+.... +.+ ..+....++++++++.+.++ + ++|++|+|+++|+.
T Consensus 31 ~~~~i~l~~g~p~--~~-~~~~~~~~~~~~~~~~~~~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~ 107 (399)
T PRK07681 31 GHKMIDLSIGNPD--MP-PADFVREEMVHTANQKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLV 107 (399)
T ss_pred CCCeEEeCCCCCC--CC-CCHHHHHHHHHHHhccccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHH
Confidence 5578899888653 44 56788899888765422 111 12223346667777765543 5 68999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEE
Q 012368 170 AAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAA 249 (465)
Q Consensus 170 ~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~ 249 (465)
.+++++.. +++.|++.+|+|.++...+...+...... +...+..+. .|++++++.+.++...+
T Consensus 108 ~~~~~~~~-----------~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v----~~~~~~~~~--~d~~~l~~~~~~~~k~v 170 (399)
T PRK07681 108 HLPMVYAN-----------PGDIILVPDPGYTAYETGIQMAGATSYYM----PLKKENDFL--PDLELIPEEIADKAKMM 170 (399)
T ss_pred HHHHHhCC-----------CCCEEEECCCCccchHHHHHhcCCEEEEE----ecCCCCCCc--CCHHHHHHhccccceEE
Confidence 98876542 68999999999988876555444322111 111111111 27899988886433444
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-cc-ccc---cCCcccEEEecccCC-Cccce
Q 012368 250 VFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WA-HEH---YGIFPDIMTLAKPLA-GGLPI 323 (465)
Q Consensus 250 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~-~~-~~~---~~~~pdi~t~sK~lg-~G~~i 323 (465)
++++|.|++| .+.+++.+++|.++|++||++||+||+|.+|-..+.. .. ... .+....+.+|||.++ .|+|+
T Consensus 171 ~l~~P~NPTG--~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRi 248 (399)
T PRK07681 171 ILNFPGNPVP--AMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRI 248 (399)
T ss_pred EEeCCCCCcC--cCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCcccee
Confidence 4555777665 3458899999999999999999999999987433321 11 111 122334558999998 69999
Q ss_pred eeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEE
Q 012368 324 GAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIG 403 (465)
Q Consensus 324 G~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~ 403 (465)
||+++++++++.+........++.+.+++.++.++|+.. ..+.++.++..+..++.+.+.+..++.....+..|.++|
T Consensus 249 G~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~g~f~~ 326 (399)
T PRK07681 249 GYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNG--AAFCEKNRGIYQERRDTLVDGFRTFGWNVDKPAGSMFVW 326 (399)
T ss_pred EEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeeEEE
Confidence 999999999988865444456678888999988888632 234444444444444445555555543211234578888
Q ss_pred EEec--CChHHHHHHHHH-CCceEeecCC-----CCEEEEecCCCCcHHHHHHHHHHHHH
Q 012368 404 IEFD--VSATPVVDACRD-SGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCK 455 (465)
Q Consensus 404 i~~~--~~~~~~~~~l~~-~Gv~v~~~~~-----~~~lRi~~~~~~t~e~i~~~l~~l~~ 455 (465)
+.++ .+..++.+.|++ +||.+.|+.. .+++||++. .+++++++++++|++
T Consensus 327 ~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~--~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 327 AEIPKGWTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALV--QDEEVLQQAVENIRN 384 (399)
T ss_pred EECCCCCCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 8874 356789999887 8999988631 368999765 578999999999987
No 112
>PRK07324 transaminase; Validated
Probab=99.97 E-value=2.2e-28 Score=243.39 Aligned_cols=340 Identities=14% Similarity=0.132 Sum_probs=228.8
Q ss_pred EEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC---CCeEEecCCHHHHH
Q 012368 92 LYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF---ADRVFFSNTGTEAN 168 (465)
Q Consensus 92 ~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~---~~~v~~~~sG~eA~ 168 (465)
-++..|..++++..+-.. +. .++.+ +++.+++......+ .+.....+|++.++++++ +++|++|+|+++|+
T Consensus 20 ~~~~~~~~~~~~~~~e~~--~~-~~~~~-~~~~~~~~~~~~~Y--~~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al 93 (373)
T PRK07324 20 TYDIAESCIDSLTLEELL--AL-AGKNP-EAFYQELGQKKLTY--GWIEGSPEFKEAVASLYQNVKPENILQTNGATGAN 93 (373)
T ss_pred ccccccCCCCCCcHHHHH--hc-cCcch-HHHHHHHhcCCccC--CCCCCCHHHHHHHHHHhcCCChhhEEEcCChHHHH
Confidence 355566667777665442 22 45567 88888776532211 122224567777777653 68999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeE
Q 012368 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA 248 (465)
Q Consensus 169 ~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a 248 (465)
..++..+. +++++|++..|+|..+...+...+..... .+...+..+. .|++++++++.++...
T Consensus 94 ~~~~~~l~-----------~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~----v~~~~~~~~~--~d~~~l~~~~~~~~kl 156 (373)
T PRK07324 94 FLVLYALV-----------EPGDHVISVYPTYQQLYDIPESLGAEVDY----WQLKEENGWL--PDLDELRRLVRPNTKL 156 (373)
T ss_pred HHHHHHhC-----------CCCCEEEEcCCCchhHHHHHHHcCCEEEE----EecccccCCC--CCHHHHHHhCCCCCcE
Confidence 99988664 26899999999998775443333322111 1111111111 2789999988754444
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccc-ccccCCcccEEEecccCC-CccceeeE
Q 012368 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA-HEHYGIFPDIMTLAKPLA-GGLPIGAA 326 (465)
Q Consensus 249 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~-~~~~~~~pdi~t~sK~lg-~G~~iG~v 326 (465)
+++..|.|++| .+.+++.+++|.++|++||+++|+||+|.++...+.... ....+....+.+|||.++ .|+|+||+
T Consensus 157 i~i~~p~NPtG--~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i 234 (373)
T PRK07324 157 ICINNANNPTG--ALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWI 234 (373)
T ss_pred EEEeCCCCCCC--CCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEE
Confidence 44556665554 345889999999999999999999999998755432111 122222233458999999 59999999
Q ss_pred EeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccc-eEEEEE
Q 012368 327 LVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLG-LIIGIE 405 (465)
Q Consensus 327 ~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g-~~~~i~ 405 (465)
++++++++.+.......+++.+++++.++..+|+. .+.+.++.++..+..++.+.+.+..++.+..+.+.| .++++.
T Consensus 235 ~~~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~--~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~ 312 (373)
T PRK07324 235 AANEEVIDILRKYRDYTMICAGVFDDMLASLALEH--RDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVK 312 (373)
T ss_pred ecCHHHHHHHHHHhCcEEecCChHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEE
Confidence 99999998887655556778888999888888762 244555555555555566666666665544444444 455565
Q ss_pred ec--CChHHHHHHHH-HCCceEeecCC---CCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 406 FD--VSATPVVDACR-DSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 406 ~~--~~~~~~~~~l~-~~Gv~v~~~~~---~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
++ .+..+++++|+ ++||.+.|+.. .+++||++. .+++.+++++++|.+++++.
T Consensus 313 ~~~~~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~--~~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 313 LDVDMPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYC--CDTETLKKGLKKLSEFLREF 371 (373)
T ss_pred eCCCCCHHHHHHHHHHhcCEEEECccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHHhc
Confidence 53 46778999876 67999998742 468898754 57899999999999998764
No 113
>PLN02483 serine palmitoyltransferase
Probab=99.96 E-value=1.5e-27 Score=243.85 Aligned_cols=328 Identities=17% Similarity=0.167 Sum_probs=229.9
Q ss_pred CCCCEEEecccCcccccCCC--CCHHHHHHHHHHHhhcccc--cC---CCCCHHHHHHHHHHHhhcCCCeEEecCCHHHH
Q 012368 95 AEGREYLDLSSGIAVNALGH--GDADWIKAVVDQANVLTHV--SN---MYYSIPQIELAKRLVACSFADRVFFSNTGTEA 167 (465)
Q Consensus 95 ~dG~~ylD~~~~~~~~~lGh--~~p~v~~a~~~~~~~~~~~--~~---~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA 167 (465)
.+++++|+|+|+.+ ||. +++.+.+++.+++++.+.. +. .+......+++++++++++.+..+++++|+.+
T Consensus 97 ~~~~~~~n~~s~~Y---Lgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~~ai~~~~G~~a 173 (489)
T PLN02483 97 TKTRRCLNLGSYNY---LGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKPAAIVFGMGYAT 173 (489)
T ss_pred CCCceEEEeecCCc---cCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHH
Confidence 46789999999766 665 4677888888888775432 12 23466799999999999996656666778888
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCC---
Q 012368 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP--- 244 (465)
Q Consensus 168 ~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--- 244 (465)
+..++.... .+++.|++.+++|++....+ ... ...+..++++|+++++++++.
T Consensus 174 n~~~i~al~-----------~~Gd~Vi~d~~~h~s~~~~~-~~~------------Ga~v~~~~~~d~~~le~~l~~~i~ 229 (489)
T PLN02483 174 NSTIIPALI-----------GKGGLIISDSLNHNSIVNGA-RGS------------GATIRVFQHNTPSHLEEVLREQIA 229 (489)
T ss_pred HHHHHHHhC-----------CCCCEEEEcchhhHHHHHHH-HHc------------CCeEEEEeCCCHHHHHHHHHhhhh
Confidence 887777644 16888998888887654332 211 133455777888888776641
Q ss_pred ---------CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC--CCCCCccccccccCCc---ccE
Q 012368 245 ---------GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG--LGRTGYLWAHEHYGIF---PDI 310 (465)
Q Consensus 245 ---------~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g--~gr~g~~~~~~~~~~~---pdi 310 (465)
....+|++|++.++.|.+.+ +++|.++|++||++||+||+|+- +|++|.+ ..+++++. .|+
T Consensus 230 ~~~p~t~~p~~k~livve~v~s~~G~~~~----l~~I~~la~~~~~~livDEa~s~g~~G~~G~g-~~~~~~v~~~~~dI 304 (489)
T PLN02483 230 EGQPRTHRPWKKIIVIVEGIYSMEGELCK----LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRG-VCELLGVDPADVDI 304 (489)
T ss_pred ccccccccCCceEEEEECCCCCCCCcccC----HHHHHHHHHHcCCEEEEECcCccCccCCCCCc-hHHhcCCCcccCcE
Confidence 12458889999998888776 99999999999999999999972 3444443 34455543 355
Q ss_pred E--EecccCCCccceeeEEeCHHHHhhccCCCCcCCC--CChHHHHHHHHHHHHHhcC-------chHHHHHHHHHHHHH
Q 012368 311 M--TLAKPLAGGLPIGAALVTEKVASAINYGDHGSTF--AGSPLVCNAAIAVLDKISN-------PAFLASVSKKGHYFK 379 (465)
Q Consensus 311 ~--t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~--~~~~~~~~aa~a~L~~~~~-------~~~~~~~~~~~~~l~ 379 (465)
+ ||||++|+ +.||+++++++++.+.......++ +.+|..++++.++|+.+.. .+..++++++.++++
T Consensus 305 ~~~SfSKs~g~--~GG~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~ 382 (489)
T PLN02483 305 MMGTFTKSFGS--CGGYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFR 382 (489)
T ss_pred EEEecchhccc--CceEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHH
Confidence 5 89999975 339999999999998754333333 3466667777888876532 134566777777777
Q ss_pred HHHHHHHHcCCCceeeeccceEEEEEec--CChHHHHHHHHHCCceEeecCC------CCEEEEecCCCCcHHHHHHHHH
Q 012368 380 ETLKQKLARNPHVKDVRGLGLIIGIEFD--VSATPVVDACRDSGLLVLTAGK------GNVVRLVPPLIISEQELDQAVE 451 (465)
Q Consensus 380 ~~l~~~~~~~~~~~~~~~~g~~~~i~~~--~~~~~~~~~l~~~Gv~v~~~~~------~~~lRi~~~~~~t~e~i~~~l~ 451 (465)
+.|+++ .+.... ...+.++++.+. ....++.+.|+++||.+.+.+. .+.+||+++..+|+++|+++++
T Consensus 383 ~~L~~~--G~~v~~--~~~sp~~~l~l~~~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~ 458 (489)
T PLN02483 383 SELQKM--GFEVLG--DNDSPVMPIMLYNPAKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIKALE 458 (489)
T ss_pred HHHHHC--CCcccC--CCCCCEEEEEECCHHHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHH
Confidence 777664 222111 122334455442 3445799999999999985432 2579999999999999999999
Q ss_pred HHHHHHHHh
Q 012368 452 ILCKTLPVL 460 (465)
Q Consensus 452 ~l~~~l~~~ 460 (465)
+|+++++.+
T Consensus 459 ~L~~~~~~~ 467 (489)
T PLN02483 459 VISEVGDLV 467 (489)
T ss_pred HHHHHHHHh
Confidence 999988764
No 114
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=4.9e-28 Score=240.67 Aligned_cols=323 Identities=16% Similarity=0.164 Sum_probs=228.1
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFAR 176 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~ 176 (465)
.++++..|.. .+| .+|.+.+++.+.+..... |+.....+|++.++++++ .++|++++|+++++..+++++.
T Consensus 33 ~~~~l~~~~~--~~~-~~~~~~~a~~~~~~~~~~----Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~ 105 (369)
T PRK08153 33 FRARIGANES--GFG-PSPSVIAAMREAAAEIWK----YGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYV 105 (369)
T ss_pred ceeEecCCCC--CCC-CCHHHHHHHHHHHHHhhc----CCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc
Confidence 4678887754 455 678899999887654221 222235678888888886 6799999999999999888654
Q ss_pred HHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCe-EEEEEccc
Q 012368 177 KFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKT-AAVFVEPI 255 (465)
Q Consensus 177 ~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~-a~vi~ep~ 255 (465)
. +++.|++.+|+|+++...+...+.... . .++..+ ..|++++++.+...++ .+++++|+
T Consensus 106 ~-----------~gd~vlv~~p~y~~~~~~~~~~g~~~~-~---vp~~~~-----~~~~~~l~~~~~~~~~~~i~l~~P~ 165 (369)
T PRK08153 106 E-----------PGDPVVTSLGAYPTFNYHVAGFGGRLV-T---VPYRDD-----REDLDALLDAARRENAPLVYLANPD 165 (369)
T ss_pred C-----------CCCEEEECCCcchHHHHHHHHcCCeEE-E---eeCCCC-----CCCHHHHHHHhcccCCcEEEEeCCC
Confidence 2 689999999999887644333222111 1 011111 1267888776643334 45566887
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCccc---EEEecccCC-CccceeeEEeCHH
Q 012368 256 QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPD---IMTLAKPLA-GGLPIGAALVTEK 331 (465)
Q Consensus 256 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pd---i~t~sK~lg-~G~~iG~v~~~~~ 331 (465)
||+| . ..+.+.+++|.++|++ +++||+||+|..|++.|....... ..++ +.||||.+| .|+|+||++++++
T Consensus 166 NPtG-~-~~~~~~l~~l~~~~~~-~~~lI~DE~y~~~~~~~~~~~~~~--~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~ 240 (369)
T PRK08153 166 NPMG-S-WHPAADIVAFIEALPE-TTLLVLDEAYCETAPAGAAPPIDT--DDPNVIRMRTFSKAYGLAGARVGYAIGAPG 240 (369)
T ss_pred CCCC-C-CCCHHHHHHHHHhCCC-CcEEEEeCchhhhcCcccchhhhh--cCCCEEEEecchHhccCcchheeeeecCHH
Confidence 7775 3 4588889999998874 999999999998865543211111 1233 447999998 6999999999999
Q ss_pred HHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEec---C
Q 012368 332 VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFD---V 408 (465)
Q Consensus 332 i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~---~ 408 (465)
+++.+... ..+++.+++++.++.++|+ ++++.+++++..+..++.+.+.+++.+. ...+..|.|++++++ .
T Consensus 241 ~~~~l~~~--~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~~~~~L~~~g~-~~~p~~~~f~~~~~~~~~~ 314 (369)
T PRK08153 241 TIKAFDKV--RNHFGMNRIAQAAALAALK---DQAYLAEVVGKIAAARDRIAAIARANGL-TPLPSATNFVAIDCGRDGA 314 (369)
T ss_pred HHHHHHHh--hcCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCCcCcEEEEECCCCcc
Confidence 99887643 2457789999999999986 4566777777777777777776666653 234566788888773 2
Q ss_pred ChHHHHHHHHHCCceEe-ecCC--CCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 409 SATPVVDACRDSGLLVL-TAGK--GNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 409 ~~~~~~~~l~~~Gv~v~-~~~~--~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
.+.++.+.|+++||.+. |+.. .+++|+++. ++++++.++++|++++..+++
T Consensus 315 ~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~---~~~~~~~~~~al~~~~~~~~~ 368 (369)
T PRK08153 315 FARAVLDGLIARDIFVRMPGVAPLDRCIRVSCG---PDEELDLFAEALPEALEAARK 368 (369)
T ss_pred cHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHHHhhc
Confidence 46788999999999995 4321 367899754 789999999999999887654
No 115
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.96 E-value=6.6e-28 Score=244.84 Aligned_cols=333 Identities=15% Similarity=0.048 Sum_probs=216.0
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHhhcccc-cCCCCCHHHHHHHHHHHhhcC-CCeEEecCCHHHHHHHHHHHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHV-SNMYYSIPQIELAKRLVACSF-ADRVFFSNTGTEANEAAIKFAR 176 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~-~~~~~~~~~~~la~~l~~~~~-~~~v~~~~sG~eA~~~al~~a~ 176 (465)
..+||..+.+ .....|.+.+++.+.......+ ...+..+.++.+++++....+ .++|++|+|+++|+..+++++.
T Consensus 86 ~~i~L~~g~p---~~~~~p~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~ 162 (431)
T PRK15481 86 PLHDLAGGNP---DPQRLPDLSRYFARLSRTPRLYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHL 162 (431)
T ss_pred hhhhhhcCCC---ChhHhHHHHHHHHHhhhhhhhcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhC
Confidence 3566665532 1113356777776654432111 111122234444444433233 4699999999999999998665
Q ss_pred HHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEc--c
Q 012368 177 KFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVE--P 254 (465)
Q Consensus 177 ~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~e--p 254 (465)
. ++|.|++.+|+|.++...+...+...... +...+. -|+++|+++++. +++++++. |
T Consensus 163 ~-----------pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v----~~~~~g-----~~~~~l~~~~~~-~~k~i~~~p~p 221 (431)
T PRK15481 163 L-----------PGDSVAVEDPCFLSSINMLRYAGFSASPV----SVDAEG-----MQPEKLERALAQ-GARAVILTPRA 221 (431)
T ss_pred C-----------CCCEEEEeCCCcHHHHHHHHHcCCeEEee----ccCCCC-----CCHHHHHHHHhc-CCCEEEECCCC
Confidence 2 68999999999998876655544322111 211111 278999998865 35555554 4
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHh-CCEEEEeccccCCCCCCcccccc-ccCCcccEEEecccCCCccceeeEEeCHHH
Q 012368 255 IQGEGGIYSATKEFLQFLRDACDDA-GALLVFDEVQCGLGRTGYLWAHE-HYGIFPDIMTLAKPLAGGLPIGAALVTEKV 332 (465)
Q Consensus 255 ~~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~~g~gr~g~~~~~~-~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i 332 (465)
.||+| ...+.+.+++|.++|++| +++||+||+|..|...+...... ..+...-+-||||.++.|+|+||+++++++
T Consensus 222 ~NPTG--~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~GlRiG~~i~~~~~ 299 (431)
T PRK15481 222 HNPTG--CSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALGPDLRLAFVASDSAT 299 (431)
T ss_pred CCCCC--ccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccCCCceeEEEeCCHHH
Confidence 55554 456899999999999999 99999999999874322111111 111222344899999999999999999999
Q ss_pred HhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCChHH
Q 012368 333 ASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSATP 412 (465)
Q Consensus 333 ~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~ 412 (465)
++.+.......+++.+.+++.++.++|+...-+.+.+++++.....++.+.+.+..++.....+..|+|+|+.++.+..+
T Consensus 300 ~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p~gg~f~~~~l~~~~~~ 379 (431)
T PRK15481 300 SARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAIPSPGDGLNLWLPLDTDSQA 379 (431)
T ss_pred HHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCeEEEEEECCCCHHH
Confidence 88885433334456789999999999974211223334444444444444444444443222455688899988556678
Q ss_pred HHHHHHHCCceEeecCC------CCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 413 VVDACRDSGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 413 ~~~~l~~~Gv~v~~~~~------~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
+++.|.++||.+.|+.. ++++||+++. .+++++++++++|.+++.
T Consensus 380 ~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 380 TALTLAKSGWLVREGEAFGVSAPSHGLRITLST-LNDAEINRLAADLHQALN 430 (431)
T ss_pred HHHHHHHCCcEEecCCccccCCCCCeEEEEcCC-CChHHHHHHHHHHHHHhc
Confidence 99999999999998531 2579998764 468999999999998864
No 116
>PRK08960 hypothetical protein; Provisional
Probab=99.96 E-value=1.7e-27 Score=238.68 Aligned_cols=335 Identities=14% Similarity=0.091 Sum_probs=225.6
Q ss_pred CCEEEecccCcccccCCCCCHHHHHHHHHHHhhcc--cccCCCCCHHHHHHHHHHHhhcC----CCeEEecCCHHHHHHH
Q 012368 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLT--HVSNMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEANEA 170 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~la~~l~~~~~----~~~v~~~~sG~eA~~~ 170 (465)
|.+++++..|... ++ .++.+.+++.+.+.... +....+..+.++.+++++.+.++ +++|++|+|+++|+..
T Consensus 31 ~~~~i~l~~g~~~--~~-~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~ 107 (387)
T PRK08960 31 GHDVIHLEIGEPD--FT-TAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLL 107 (387)
T ss_pred CCCeEEeCCCCCC--CC-CCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHH
Confidence 4467888877653 33 47889999998876421 11111223345666666655433 7899999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEE
Q 012368 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV 250 (465)
Q Consensus 171 al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~v 250 (465)
++.+.. .+++.|++.+|+|.++...+...+..... .+...+..+ ..|+++++++++++...++
T Consensus 108 ~~~~~~-----------~~gd~vlv~~p~y~~~~~~~~~~g~~~~~----v~~~~~~~~--~~d~~~l~~~~~~~~~~i~ 170 (387)
T PRK08960 108 ASSLLV-----------DPGKHWLLADPGYPCNRHFLRLVEGAAQL----VPVGPDSRY--QLTPALVERHWNADTVGAL 170 (387)
T ss_pred HHHHhc-----------CCCCEEEEcCCCCcchHHHHHhcCCeEEE----EecCcccCC--CCCHHHHHHHhCccceEEE
Confidence 888654 26899999999998876554433321111 111111000 0278999998886566778
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEE---EecccCC-CccceeeE
Q 012368 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM---TLAKPLA-GGLPIGAA 326 (465)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~---t~sK~lg-~G~~iG~v 326 (465)
+++|.|++|. .++.+.+++|.++|++||+++|+||+|.++...+.... .....++++ +|||.+| .|+|+||+
T Consensus 171 i~~p~NPtG~--~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~--~~~~~~~vi~~~S~SK~~g~~GlRiG~~ 246 (387)
T PRK08960 171 VASPANPTGT--LLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAAS--VLEVDDDAFVLNSFSKYFGMTGWRLGWL 246 (387)
T ss_pred EECCCCCCCc--CcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCC--hhhccCCEEEEeecccccCCcccEEEEE
Confidence 8888776663 45889999999999999999999999988743322111 122334444 6899998 69999999
Q ss_pred EeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCce-eeeccceEEEEE
Q 012368 327 LVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVK-DVRGLGLIIGIE 405 (465)
Q Consensus 327 ~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~g~~~~i~ 405 (465)
++++++++.+.......+.+.+.+++.++.++|+. ....+.+++++..+..++.+.+.+..++... ..+..|.++|++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~-~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f~~~~ 325 (387)
T PRK08960 247 VAPPAAVPELEKLAQNLYISASTPAQHAALACFEP-ETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAFYLYAD 325 (387)
T ss_pred EcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhc-CcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEEEEEe
Confidence 99999988876544445566788999998888853 1234455545444444555555555555322 224446777888
Q ss_pred ec---CChHHHHHHHH-HCCceEeecC------CCCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 406 FD---VSATPVVDACR-DSGLLVLTAG------KGNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 406 ~~---~~~~~~~~~l~-~~Gv~v~~~~------~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
++ .+..++++.|+ ++||.+.|+. .++++|+++.. +.+++.+++++|.++++
T Consensus 326 ~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~--~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 326 ISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ--SLPRLQEAVERIARGLR 386 (387)
T ss_pred ccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 73 35677888876 5899998762 13689998774 68889999999887764
No 117
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.96 E-value=1.1e-27 Score=240.21 Aligned_cols=335 Identities=16% Similarity=0.092 Sum_probs=217.5
Q ss_pred CCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcc---cccCCCCCHHHHHHHHHHHhhcC----CC-eEEecCCHHHH
Q 012368 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLT---HVSNMYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEA 167 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~~----~~-~v~~~~sG~eA 167 (465)
+|+.++||..|.. .++ .+|.+.+++.+.+.... +....+..+.++++++++.+.++ ++ +|++|+|+++|
T Consensus 28 ~~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~a 104 (388)
T PRK07366 28 AGKELIDLSLGSS--DLP-APAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEG 104 (388)
T ss_pred cCCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHH
Confidence 4566788888765 344 47889999988775321 11111222345666666655444 56 69999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCe
Q 012368 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKT 247 (465)
Q Consensus 168 ~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 247 (465)
+..+++++.. +++.|++.+|+|.++...+...+...... ++.....+. .|++++++.+.++..
T Consensus 105 l~~~~~~l~~-----------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v----~~~~~~~~~--~d~~~l~~~~~~~~k 167 (388)
T PRK07366 105 TAHLPLAVLN-----------PGDFALLLDPGYPSHAGGVYLAGGQIYPM----PLRAENDFL--PVFADIPTEVLAQAR 167 (388)
T ss_pred HHHHHHHhCC-----------CCCEEEEcCCCCcchHHHHHhcCCEEEEE----ECCCccCCC--CCHHHHHHhhcccce
Confidence 9998886552 68999999999998876555444322111 111111111 267888777654444
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc--cccccc----CCcccEEEecccCC-Cc
Q 012368 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL--WAHEHY----GIFPDIMTLAKPLA-GG 320 (465)
Q Consensus 248 a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~--~~~~~~----~~~pdi~t~sK~lg-~G 320 (465)
++++++|.||+| ...+.+.+++|.++|++||++||+||+|..|...+.. ...... .....+.+|||.+| .|
T Consensus 168 ~i~l~~p~NPTG--~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~G 245 (388)
T PRK07366 168 LMVLSYPHNPTT--AIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGG 245 (388)
T ss_pred EEEEeCCCCCCC--ccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcc
Confidence 556666666555 3458999999999999999999999999987443321 111111 11223448999997 69
Q ss_pred cceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccce
Q 012368 321 LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGL 400 (465)
Q Consensus 321 ~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~ 400 (465)
+|+||+++++++++.+........++..+..+.++.+++.. .+++++++++..+..++.+.+.+.+++.....+..|+
T Consensus 246 lRiG~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~--~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~ 323 (388)
T PRK07366 246 FRIGFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALTG--PQATVQQTVQIFRQRRDAFINALHQIGWPVPLPEATM 323 (388)
T ss_pred hhheehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeE
Confidence 99999999999998886433323333333344555666642 3455555555555555555555555543223345688
Q ss_pred EEEEEecC----ChHHHHHHHH-HCCceEeecC---C--CCEEEEecCCCCcHHHHHHHHHHHHHH
Q 012368 401 IIGIEFDV----SATPVVDACR-DSGLLVLTAG---K--GNVVRLVPPLIISEQELDQAVEILCKT 456 (465)
Q Consensus 401 ~~~i~~~~----~~~~~~~~l~-~~Gv~v~~~~---~--~~~lRi~~~~~~t~e~i~~~l~~l~~~ 456 (465)
|+|+.++. +..++++.|+ ++||.+.|+. . .+++||+++ .+++++++++++|.++
T Consensus 324 f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 324 YVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALV--HDPDILEEAVERIAAF 387 (388)
T ss_pred EEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 88998842 3567887775 6799999862 1 368999765 5789999999999875
No 118
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.5e-27 Score=239.74 Aligned_cols=340 Identities=15% Similarity=0.101 Sum_probs=220.7
Q ss_pred CCCEEEecccCcccccCCCCCHHHHHHHHHHHhhccc--ccCCCCCHHHHHHHHHHHhhcC-----CC-eEEecCCHHHH
Q 012368 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTH--VSNMYYSIPQIELAKRLVACSF-----AD-RVFFSNTGTEA 167 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~la~~l~~~~~-----~~-~v~~~~sG~eA 167 (465)
.|++++|+..|.. .++ .+|.+.+++.+.+..... +...+....++++++++.+.++ ++ +|++|+|++++
T Consensus 42 ~~~~~i~L~~g~p--~~~-~~~~~~~~l~~~~~~~~~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~a 118 (410)
T PRK06290 42 PDMELIDMGVGEP--DEM-ADESVVEVLCEEAKKPENRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPA 118 (410)
T ss_pred CCCCeEEcCCCCC--CCC-CCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHH
Confidence 4667899988865 455 567788888876643211 1111222335666666655433 34 79999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCe
Q 012368 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKT 247 (465)
Q Consensus 168 ~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 247 (465)
+..++++.. ++++.|++.+|+|.++...+...+..... .+...+..+. .|++++++.+.++..
T Consensus 119 l~~~~~~~~-----------~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~----v~~~~~~~~~--~d~~~l~~~~~~~~k 181 (410)
T PRK06290 119 LAMLPSCFI-----------NPGDVTLMTVPGYPVTGTHTKYYGGEVYN----LPLLEENNFL--PDLDSIPKDIKEKAK 181 (410)
T ss_pred HHHHHHHhC-----------CCCCEEEEeCCCCccHHHHHHHcCCEEEE----EecCCCcCCc--CCHHHHHHhhcccce
Confidence 999888654 26899999999998876544443322111 1111111111 278999888865434
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccc-cc---cCCcccEEEecccCC-Cccc
Q 012368 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAH-EH---YGIFPDIMTLAKPLA-GGLP 322 (465)
Q Consensus 248 a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~-~~---~~~~pdi~t~sK~lg-~G~~ 322 (465)
.+++++|+||+| .+.+.+.+++|.++|++||++||+||+|.++...+..... .. .+...-+.+|||.++ .|+|
T Consensus 182 ~i~l~nP~NPTG--~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlR 259 (410)
T PRK06290 182 LLYLNYPNNPTG--AVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWR 259 (410)
T ss_pred EEEEECCCCCCC--cCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhh
Confidence 445555866665 4458999999999999999999999999987433321111 11 122233458999997 5999
Q ss_pred eeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeecc-ceE
Q 012368 323 IGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGL-GLI 401 (465)
Q Consensus 323 iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-g~~ 401 (465)
+||+++++++++.+.........+.+.+++.++.++|+. .++.++.++..+..++.+.+.+.+++. ...++. |.+
T Consensus 260 iG~ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~p~g~f~ 335 (410)
T PRK06290 260 LAFVVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDH---PEITEKIREKYSRRLDKLVKILNEVGF-KAEMPGGTFY 335 (410)
T ss_pred eEeEEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHHHHHHHhCCC-eecCCCeeeE
Confidence 999999999998886433334445566788888888863 344444444444444445554445542 223333 455
Q ss_pred EEEEec---------CChHHHHHHHHHCCceE-eecCC-CCEEEEecC-CCCcHHHHHHHHHHHHHHHHHhh
Q 012368 402 IGIEFD---------VSATPVVDACRDSGLLV-LTAGK-GNVVRLVPP-LIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 402 ~~i~~~---------~~~~~~~~~l~~~Gv~v-~~~~~-~~~lRi~~~-~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
+|+.++ .+..++++.|+++|+++ .|+.. ++++||++. ...++++.++++++|++.|..+.
T Consensus 336 l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~~ 407 (410)
T PRK06290 336 LYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDVE 407 (410)
T ss_pred EEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHHHhhcc
Confidence 567773 14678999999886544 45432 468999875 34588999999999999987654
No 119
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.96 E-value=2e-27 Score=238.82 Aligned_cols=335 Identities=15% Similarity=0.013 Sum_probs=219.9
Q ss_pred CCCEEEecccCcccccCCCCCHHHHHHHHHHHhhccccc-CCCCCHHHHHHHHHHHhhcC-----CC-eEEecCCHHHHH
Q 012368 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS-NMYYSIPQIELAKRLVACSF-----AD-RVFFSNTGTEAN 168 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~-----~~-~v~~~~sG~eA~ 168 (465)
.|++++|+..+... ++ .++.+.+++.+.+.....+. ..+..+.++++++++.+.++ .+ +|++|+|+++|+
T Consensus 27 ~~~~~i~l~~~~p~--~~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al 103 (396)
T PRK09147 27 ADLPPISLSIGEPK--HP-TPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREAL 103 (396)
T ss_pred cCCCeEecCCCCCC--CC-CCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHH
Confidence 47889999888753 44 46788899887665432221 11223446677777765544 24 899999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCC---CceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCC
Q 012368 169 EAAIKFARKFQRHSNPDSKEP---ATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPG 245 (465)
Q Consensus 169 ~~al~~a~~~t~~~~~~~~~~---~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~ 245 (465)
..+++++.. + ++.|++.+|+|.++...+...+.... . .|...+..+. .|++++++.+.++
T Consensus 104 ~~~~~~l~~-----------~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~-~---vp~~~~~~~~--~d~~~l~~~~~~~ 166 (396)
T PRK09147 104 FAFAQTVID-----------RDGPGPLVVCPNPFYQIYEGAALLAGAEPY-F---LNCDPANNFA--PDFDAVPAEVWAR 166 (396)
T ss_pred HHHHHHHcC-----------CCCCCCEEEEcCCCccchHHHHHhcCCEEE-E---eccCccccCc--cCHHHHHHHHhhc
Confidence 999886652 4 78899999999887655443332211 1 1221111111 2788998877544
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc--ccc-c---cc-----cCCcccEEEec
Q 012368 246 KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY--LWA-H---EH-----YGIFPDIMTLA 314 (465)
Q Consensus 246 ~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~--~~~-~---~~-----~~~~pdi~t~s 314 (465)
...+++++|.||+| .+++++.+++|.++|++||++||+||+|..|...+. ... . .. ++...-+.+||
T Consensus 167 ~k~i~l~nP~NPTG--~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 244 (396)
T PRK09147 167 TQLLFVCSPGNPTG--AVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLS 244 (396)
T ss_pred cEEEEEcCCCCCcC--ccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccc
Confidence 44556667766665 456899999999999999999999999998743331 111 1 00 11223344799
Q ss_pred ccCC-CccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCce
Q 012368 315 KPLA-GGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVK 393 (465)
Q Consensus 315 K~lg-~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 393 (465)
|.++ .|+|+||+++++++++.+.......+++.+++.+.++.+++. .+++.++.++..+..++.+.+.+..+ ...
T Consensus 245 K~~~~~GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~---~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~ 320 (396)
T PRK09147 245 KRSNVPGLRSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWN---DEAHVRENRALYREKFDAVTPILAPV-LDV 320 (396)
T ss_pred cccCCccceeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhc---chhHHHHHHHHHHHHHHHHHHHHHHh-cCC
Confidence 9987 599999999999998887643333456778888888877774 33344443333333333333333332 111
Q ss_pred eeeccceEEEEEecCChHHHHHHHH-HCCceEeecCC-----------CCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 394 DVRGLGLIIGIEFDVSATPVVDACR-DSGLLVLTAGK-----------GNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 394 ~~~~~g~~~~i~~~~~~~~~~~~l~-~~Gv~v~~~~~-----------~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
..+..|.++|++++....++++.|+ ++||.+.|+.. .+++||++. .+++++++++++|.+++.
T Consensus 321 ~~p~~g~f~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~--~~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 321 QLPDAGFYLWAKVPGDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALV--APLAECVEAAERIVDFCR 395 (396)
T ss_pred CCCCeeEEEEEECCCCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHhc
Confidence 2345688889988645677888886 67999987521 257888655 468899999999998763
No 120
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.96 E-value=3.7e-27 Score=234.45 Aligned_cols=321 Identities=17% Similarity=0.185 Sum_probs=222.0
Q ss_pred CEEEecccCcccccCCC-CCHHHHHHHHHHHhhcc-------cccCC-----CCCHHHHHHHHHHHhhcCCCeEEecCCH
Q 012368 98 REYLDLSSGIAVNALGH-GDADWIKAVVDQANVLT-------HVSNM-----YYSIPQIELAKRLVACSFADRVFFSNTG 164 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~-------~~~~~-----~~~~~~~~la~~l~~~~~~~~v~~~~sG 164 (465)
.+++||+++.+ ||+ .+|++.+++.+++.+.. .+..+ ...+...+++++|+++++.+.+++++||
T Consensus 4 ~~~~~~~s~~Y---L~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~~l~~~sG 80 (370)
T PRK05937 4 SLSIDFVTNDF---LGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPEAFIVPSG 80 (370)
T ss_pred CceEEeECCCc---cCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCeEEEECCh
Confidence 46899999876 887 88999999999887751 11111 1345689999999999997778888999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCC
Q 012368 165 TEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP 244 (465)
Q Consensus 165 ~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~ 244 (465)
+.|+..++... . +++.+|+.++.+|++....+..... ....++++|+++|+++++.
T Consensus 81 ~~a~~~~~~~~---~---------~~~d~ii~d~~~H~sv~~~~~~~~~------------~~~~~~~~d~~~l~~~l~~ 136 (370)
T PRK05937 81 YMANLGLCAHL---S---------SVTDYVLWDEQVHISVVYSLSVISG------------WHQSFRHNDLDHLESLLES 136 (370)
T ss_pred HHHHHHHHHHh---C---------CCCCEEEEEhhhhHHHHHHHHHcCC------------ceEEecCCCHHHHHHHHHh
Confidence 99986544322 1 2557899999999998776543210 1123467899999999862
Q ss_pred -----CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-C-CCCCCccccc--cccCCcccEEEecc
Q 012368 245 -----GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC-G-LGRTGYLWAH--EHYGIFPDIMTLAK 315 (465)
Q Consensus 245 -----~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g-~gr~g~~~~~--~~~~~~pdi~t~sK 315 (465)
.++.+|+++++++++|.+.| +++|.++|+++|+++|+||+|+ | +|..|.++.. ...+..+|+.||||
T Consensus 137 ~~~~~~~~~~v~v~~v~s~~G~i~p----l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK 212 (370)
T PRK05937 137 CRQRSFGRIFIFVCSVYSFKGTLAP----LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSK 212 (370)
T ss_pred hhccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechh
Confidence 24567888999999999887 9999999999999999999998 3 5555543221 11123367889999
Q ss_pred cCCC-ccceeeEEeCHHHHhhccC--CCCcCCCCChHHHHHHHHHHHHHhcCc--hHHHHHHHHHHHHHHHHHHHHHcCC
Q 012368 316 PLAG-GLPIGAALVTEKVASAINY--GDHGSTFAGSPLVCNAAIAVLDKISNP--AFLASVSKKGHYFKETLKQKLARNP 390 (465)
Q Consensus 316 ~lg~-G~~iG~v~~~~~i~~~~~~--~~~~~t~~~~~~~~~aa~a~L~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~ 390 (465)
.+|+ | +.+++.+++.+.+.. .....+.+.++++++++.++++.+.+. ...++++++.+++++.|.. ..
T Consensus 213 ~~g~~G---~~vl~~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~----~~ 285 (370)
T PRK05937 213 ALGSMG---AALLSSSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSS----AA 285 (370)
T ss_pred hhhcCc---eEEEcCHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCC----CC
Confidence 9975 4 345565665554331 122333446788888888888877542 2344555555555444321 11
Q ss_pred CceeeeccceEEEEEec-CChHHHHHHHHHCCceEeecC--CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhhc
Q 012368 391 HVKDVRGLGLIIGIEFD-VSATPVVDACRDSGLLVLTAG--KGNVVRLVPPLIISEQELDQAVEILCKTLPVLDSN 463 (465)
Q Consensus 391 ~~~~~~~~g~~~~i~~~-~~~~~~~~~l~~~Gv~v~~~~--~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 463 (465)
.+....+.++ .....+.+.|.++||++.... ..+.+|++++..+|++|++++++.|+++++++.++
T Consensus 286 -------~~~~~~i~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~~~ 354 (370)
T PRK05937 286 -------PGCVQPIFLPGISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQKN 354 (370)
T ss_pred -------CCCEEEEEeCChhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCC
Confidence 1112223332 345678888999999887432 13679999999999999999999999999887654
No 121
>PLN00175 aminotransferase family protein; Provisional
Probab=99.96 E-value=2.7e-27 Score=238.48 Aligned_cols=332 Identities=18% Similarity=0.157 Sum_probs=222.0
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHhhccc-c-cCCCCCHHHHHHHHHHHhhcC----CC-eEEecCCHHHHHHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTH-V-SNMYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEANEAA 171 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~-~-~~~~~~~~~~~la~~l~~~~~----~~-~v~~~~sG~eA~~~a 171 (465)
..|||..|.+. +. .++.+.+++.+.+.+... + ...+..+.++++++++.+.++ .+ +|++|+|+++|+..+
T Consensus 55 ~~i~l~~G~P~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~ 131 (413)
T PLN00175 55 GAINLGQGFPN--FD-GPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAAT 131 (413)
T ss_pred CeEecCCCCCC--CC-CCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHH
Confidence 57899888763 22 467899999888775211 1 111223346667776665544 44 699999999999988
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEE
Q 012368 172 IKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVF 251 (465)
Q Consensus 172 l~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi 251 (465)
+.... ++++.|++.+|+|..+...+...+...... +..+.. + ..|+++|++.+.++...+++
T Consensus 132 ~~~l~-----------~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v----~~~~~~-~--~~~~~~l~~~~~~~~k~i~i 193 (413)
T PLN00175 132 ILGLI-----------NPGDEVILFAPFYDSYEATLSMAGAKIKTV----TLRPPD-F--AVPEDELKAAFTSKTRAILI 193 (413)
T ss_pred HHHhC-----------CCCCEEEEeCCCchhHHHHHHHcCCEEEEE----ECCccc-C--CCCHHHHHHhcCcCceEEEe
Confidence 88554 268999999999987765444333221111 111110 0 12789999998754444445
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccc-ccccC---CcccEEEecccCC-CccceeeE
Q 012368 252 VEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA-HEHYG---IFPDIMTLAKPLA-GGLPIGAA 326 (465)
Q Consensus 252 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~-~~~~~---~~pdi~t~sK~lg-~G~~iG~v 326 (465)
.+|.|++| .+++.+.+++|.++|++||+++|+||+|.++.+.+.... ....+ ....+.+|||.++ .|+|+||+
T Consensus 194 ~~p~NPtG--~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~ 271 (413)
T PLN00175 194 NTPHNPTG--KMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWA 271 (413)
T ss_pred cCCCCCCC--cCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeee
Confidence 55655554 346899999999999999999999999998744332111 11112 2233447999999 69999999
Q ss_pred EeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeecc-ceEEEEE
Q 012368 327 LVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGL-GLIIGIE 405 (465)
Q Consensus 327 ~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-g~~~~i~ 405 (465)
++++++++.+.......+++.+++.+.++.++|+.. +.+.+++++..+..++.+.+.+.+++. ....+. |.|+|+.
T Consensus 272 v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~p~g~~f~~~~ 348 (413)
T PLN00175 272 IAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRAP--ESYYEELKRDYSAKKDILVEGLKEVGF-KVYPSSGTYFVMVD 348 (413)
T ss_pred EeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHCCC-eecCCCeeEEEEEe
Confidence 999999988865444456888999999999888632 344455555444445555555555442 233333 4567777
Q ss_pred ec---C-ChHHHHHHHH-HCCceEeecC-------C-CCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 406 FD---V-SATPVVDACR-DSGLLVLTAG-------K-GNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 406 ~~---~-~~~~~~~~l~-~~Gv~v~~~~-------~-~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
+. . +..++++.|+ ++||.+.|+. . .+++||++. .+++++++++++|.++++
T Consensus 349 ~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~--~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 349 HTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFC--KDEETLRAAVERMKTKLK 412 (413)
T ss_pred ccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEc--CCHHHHHHHHHHHHHHHh
Confidence 62 2 3568999887 5699998752 1 257899765 489999999999998875
No 122
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.96 E-value=5.2e-27 Score=234.98 Aligned_cols=334 Identities=18% Similarity=0.128 Sum_probs=221.9
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHhhccc-c-cCCCCCHHHHHHHHHHHhhcC----CCeEEecCCHHHHHHHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTH-V-SNMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEANEAAI 172 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~-~-~~~~~~~~~~~la~~l~~~~~----~~~v~~~~sG~eA~~~al 172 (465)
.+++|..|.+. ++ .++.+.+++.+.+..... + ...+..+.++++++++.+.++ .++|++++|+++|+..++
T Consensus 25 ~~i~l~~g~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~ 101 (382)
T PRK06108 25 GVLPLWFGESD--LP-TPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAA 101 (382)
T ss_pred CeEEecCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHH
Confidence 46888887663 33 478899999988765321 1 112233447777777776655 689999999999999988
Q ss_pred HHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCC-CceEeeCCCHHHHHhhcCCCCeEEEE
Q 012368 173 KFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMP-GVNFVEYGNIEATRKLIQPGKTAAVF 251 (465)
Q Consensus 173 ~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~le~~l~~~~~a~vi 251 (465)
+.+.. +++.|++.+|+|..+...+...+.... . .+... +..+ ..|++++++.++++...+++
T Consensus 102 ~~l~~-----------~gd~vl~~~p~y~~~~~~~~~~g~~~~-~---v~~~~~~~~~--~~d~~~l~~~~~~~~~~i~l 164 (382)
T PRK06108 102 QALVG-----------PGDEVVAVTPLWPNLVAAPKILGARVV-C---VPLDFGGGGW--TLDLDRLLAAITPRTRALFI 164 (382)
T ss_pred HHhcC-----------CCCEEEEeCCCccchHHHHHHCCCEEE-E---eeCCCCCCCc--cCCHHHHHHhcCccceEEEE
Confidence 86642 688999999999776544333222111 1 11111 0000 02789999988754444555
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCC-Ccc-cc-ccccC---CcccEEEecccCC-Ccccee
Q 012368 252 VEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT-GYL-WA-HEHYG---IFPDIMTLAKPLA-GGLPIG 324 (465)
Q Consensus 252 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~-g~~-~~-~~~~~---~~pdi~t~sK~lg-~G~~iG 324 (465)
+.|.|++| . .++.+.+++|.++|+++|+++|+||+|.+|... +.. .. ....+ ...-+.+|||.++ .|+|+|
T Consensus 165 ~~p~NPtG-~-~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG 242 (382)
T PRK06108 165 NSPNNPTG-W-TASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLG 242 (382)
T ss_pred ECCCCCCC-c-ccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCccccee
Confidence 56655554 3 458899999999999999999999999987443 211 11 11111 1122447999998 599999
Q ss_pred eEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeecc-ceEEE
Q 012368 325 AALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGL-GLIIG 403 (465)
Q Consensus 325 ~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-g~~~~ 403 (465)
|+++++++++.+.......+++.+++.+.++.++|+.. +++.+++++.....++.+.+.+...+.+....+. |.+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~ 320 (382)
T PRK06108 243 WLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEG--EDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAF 320 (382)
T ss_pred eeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEE
Confidence 99999999888764333345667889999999888742 3344444444444445555544444433333333 55667
Q ss_pred EEec--CChHHHHHHHH-HCCceEeecC-----CCCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 404 IEFD--VSATPVVDACR-DSGLLVLTAG-----KGNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 404 i~~~--~~~~~~~~~l~-~~Gv~v~~~~-----~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
+.++ .+..++++.|+ ++||.+.++. ..+++|++++. +++++++++++|.++++
T Consensus 321 ~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 321 FRIPGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred EeCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 7774 34677888886 5799998752 13689998876 89999999999998764
No 123
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.96 E-value=6.8e-27 Score=236.42 Aligned_cols=344 Identities=13% Similarity=0.093 Sum_probs=224.3
Q ss_pred CCEEEecccCcccccCCC-CCHHHHHHHHHHHhhccc-ccC--CCCCHHHHHHHHHHHhhcC----CCeEEecCCHHHHH
Q 012368 97 GREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTH-VSN--MYYSIPQIELAKRLVACSF----ADRVFFSNTGTEAN 168 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~-~~~--~~~~~~~~~la~~l~~~~~----~~~v~~~~sG~eA~ 168 (465)
|+.+|++..+.+...-.. .+|++.+++.+++..... .+. .+..+.++.+++++.+.++ .++|++|+|+++|+
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al 130 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAI 130 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHH
Confidence 778999988865431112 567899999988865321 111 1222335556666554433 57899999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeE
Q 012368 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA 248 (465)
Q Consensus 169 ~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a 248 (465)
.++++.+. .++++|++.+|+|+.+.......+....+. ++.+...+. -|+++++++++++..+
T Consensus 131 ~l~~~~l~-----------~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~----~~~~~~~~~--~d~~~l~~~~~~~~~~ 193 (430)
T PLN00145 131 EIIMSVLA-----------QPGANILLPRPGYPLYEARAVFSGLEVRHF----DLLPERGWE--VDLEGVEALADENTVA 193 (430)
T ss_pred HHHHHHhc-----------CCCCEEEEcCCCCccHHHHHHHcCCEEEEe----eCCcccCCc--CCHHHHHHHhCcCceE
Confidence 99988664 268999999999988664433333221111 111111110 2889999999876778
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-ccccccC---CcccEEEecccCC-Cccce
Q 012368 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAHEHYG---IFPDIMTLAKPLA-GGLPI 323 (465)
Q Consensus 249 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~-~~~~~~~---~~pdi~t~sK~lg-~G~~i 323 (465)
+++++|+|++| .+.+.+.+++|.++|++||+++|+||+|.+|.+.+.. .....++ ...-+-+|||.++ .|||+
T Consensus 194 i~i~~P~NPtG--~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~Rl 271 (430)
T PLN00145 194 MVIINPNNPCG--SVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRL 271 (430)
T ss_pred EEEeCCCCCCC--CCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeE
Confidence 88899976665 4568899999999999999999999999987543321 1111111 1223347899977 49999
Q ss_pred eeEEe--CHHHHh------hccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCcee-
Q 012368 324 GAALV--TEKVAS------AINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKD- 394 (465)
Q Consensus 324 G~v~~--~~~i~~------~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~- 394 (465)
||+++ ++.+++ .+... .....+.+.+.|.|+..+|+.- .+++.++.++..+..++.+.+.+..++.+..
T Consensus 272 G~iv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~ 349 (430)
T PLN00145 272 GWIATCDPNGILKETKVVDSIRNY-LNISTDPATFVQGAIPQIIANT-KEEFFTKTLGLLKETADICYEKIKEIKCITCP 349 (430)
T ss_pred EEEEEecchhhhhhhHHHHHHHHH-hcccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99997 344432 22211 1222345778899988888731 2345555554444445555555566654432
Q ss_pred -eeccceEEEEEecC-------ChHHHHHHHH-HCCceEeecC---CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 395 -VRGLGLIIGIEFDV-------SATPVVDACR-DSGLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 395 -~~~~g~~~~i~~~~-------~~~~~~~~l~-~~Gv~v~~~~---~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
.+..|.|+++.++. +..+++..|+ ++||.+.|+. ..+++||++. .+.+++++++++|.+++.+.++
T Consensus 350 ~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~--~~~~~l~~al~rl~~~~~~~~~ 427 (430)
T PLN00145 350 HKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFA--IDPPSLEDGLERLKSFCLRHAK 427 (430)
T ss_pred cCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHHhcc
Confidence 24456677777631 3456776665 6799998863 2478999776 4789999999999999988765
Q ss_pred c
Q 012368 463 N 463 (465)
Q Consensus 463 ~ 463 (465)
.
T Consensus 428 ~ 428 (430)
T PLN00145 428 L 428 (430)
T ss_pred c
Confidence 4
No 124
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=3.1e-27 Score=234.27 Aligned_cols=322 Identities=20% Similarity=0.275 Sum_probs=221.3
Q ss_pred CCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHH
Q 012368 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIK 173 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~ 173 (465)
+|.+++||..|.. +++ .+|.+.+++.+.+.... .|+.....+|++.++++++ +++|++|+|+++++..+++
T Consensus 28 ~~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~----~Y~~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~ 100 (357)
T PRK14809 28 DPDDLVKLSSNEN--PHG-PSPAAVEAIREAAERVH----SYPKASHADLTAALADRWDVSPEQVWLANGGDGALDYLAR 100 (357)
T ss_pred CccceeEecCCCC--CCC-CCHHHHHHHHHHHhhhh----cCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH
Confidence 4567999988754 455 67889999888765422 2333335678888888776 7899999999999999888
Q ss_pred HHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEc
Q 012368 174 FARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVE 253 (465)
Q Consensus 174 ~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~e 253 (465)
++.. +++.|++.+|+|..+.......+.... . .++.....+ ..|++++++... +...+++++
T Consensus 101 ~~~~-----------~gd~V~v~~P~y~~~~~~~~~~g~~~~-~---~~l~~~~~~--~~~~~~~~~~~~-~~k~i~l~~ 162 (357)
T PRK14809 101 AMLD-----------PGDTVLVPDPGFAYYGMSARYHHGEVR-E---YPVSKADDF--EQTADTVLDAYD-GERIVYLTS 162 (357)
T ss_pred HhcC-----------CCCEEEEeCCChHHHHHHHHHcCCeEE-E---EecccCcCC--CcCHHHHHHhhc-CCcEEEEeC
Confidence 6642 689999999998755433222221111 0 011110000 025677766653 234566666
Q ss_pred ccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccc-cccccCCcccEEEecccCC-CccceeeEEeCHH
Q 012368 254 PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEHYGIFPDIMTLAKPLA-GGLPIGAALVTEK 331 (465)
Q Consensus 254 p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~-~~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~ 331 (465)
|.|++| ..++.+.+++|.++|++ +++||+||+|..|...+... ..+..+....+.+|||.++ .|+|+||++++++
T Consensus 163 p~NPTG--~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~ 239 (357)
T PRK14809 163 PHNPTG--SEIPLDEVEALAERTDE-ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEE 239 (357)
T ss_pred CCCCCC--cCCCHHHHHHHHHhCcc-CcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHH
Confidence 666655 34588889999999875 78999999999885433211 1122233344568999998 6999999999999
Q ss_pred HHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCChH
Q 012368 332 VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSAT 411 (465)
Q Consensus 332 i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~ 411 (465)
+++.+... ..+++.+++++.++.++|+ ++++.++.++..+..++.+.+.+... ..+..|+|+++.+. +..
T Consensus 240 ~~~~~~~~--~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~g~f~~~~~~-~~~ 309 (357)
T PRK14809 240 WADAYARV--NTPFAASELACRAGLAALD---DDEHVERTVETARWAREYIREELDAP----TWESAGNFVLAEVG-DAS 309 (357)
T ss_pred HHHHHHHh--CCCCCCCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhcCc----cCCCCCCEEEEECC-CHH
Confidence 99888643 3467788899988888875 35556666655555566665555432 12456889998874 567
Q ss_pred HHHHHHHHCCceEeecCC---CCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 412 PVVDACRDSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 412 ~~~~~l~~~Gv~v~~~~~---~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
++.+.|.++||.+.++.. ++++|+++. +.+++++++++|+++++
T Consensus 310 ~~~~~l~~~gv~v~~g~~f~~~~~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 310 AVAEAAQERGVIVRDCTSFGLPECIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred HHHHHHHHCCEEEEECccCCCCCeEEEecC---CHHHHHHHHHHHHHHhc
Confidence 899999999999998742 468999753 57899999999998764
No 125
>PRK09148 aminotransferase; Validated
Probab=99.96 E-value=8.6e-27 Score=234.56 Aligned_cols=340 Identities=14% Similarity=0.105 Sum_probs=220.6
Q ss_pred CCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcc---cccCCCCCHHHHHHHHHHHhhcC----CC-eEEecCCHHHH
Q 012368 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLT---HVSNMYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEA 167 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~~----~~-~v~~~~sG~eA 167 (465)
.|+.+|||..+.+ .++ .++.+.+++.+.++... +....+..+.++++++++.+.++ ++ +|++|+|+++|
T Consensus 28 ~~~~~i~l~~~~p--~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 104 (405)
T PRK09148 28 AGADIIDLGMGNP--DLP-TPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEG 104 (405)
T ss_pred cCCCeEEcCCCCC--CCC-CCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHH
Confidence 4667889987754 344 36788888887764311 11111223446666666665544 45 79999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCe
Q 012368 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKT 247 (465)
Q Consensus 168 ~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 247 (465)
+..+++.... +++.|++.+|+|.++...+...+.... . .+...+..+. .+++++.+...++..
T Consensus 105 l~~~~~~l~~-----------~gd~Vl~~~P~y~~~~~~~~~~g~~v~-~---v~~~~~~~~~--~~l~~~~~~~~~~~~ 167 (405)
T PRK09148 105 FANMAQAITA-----------PGDVILCPNPSYPIHAFGFIMAGGVIR-S---VPAEPDEEFF--PALERAVRHSIPKPI 167 (405)
T ss_pred HHHHHHHhcC-----------CCCEEEEcCCCCcccHHHHHhcCCEEE-E---EeCCCCCCCc--cCHHHHHhhccccce
Confidence 9998886652 689999999999987654433322111 0 1111111110 134333332223345
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccc-ccccc----CCcccEEEecccCC-Ccc
Q 012368 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEHY----GIFPDIMTLAKPLA-GGL 321 (465)
Q Consensus 248 a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~-~~~~~----~~~pdi~t~sK~lg-~G~ 321 (465)
.++++.|+|++| ..++.+.+++|.++|++||+++|+||+|..|...+... ..... +....+.+|||.++ .|+
T Consensus 168 ~v~l~~P~NPtG--~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGl 245 (405)
T PRK09148 168 ALIVNYPSNPTA--YVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGW 245 (405)
T ss_pred EEEEeCCCCCCC--cCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcch
Confidence 566677777665 44589999999999999999999999998874333211 11111 22233458999999 699
Q ss_pred ceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceE
Q 012368 322 PIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLI 401 (465)
Q Consensus 322 ~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~ 401 (465)
|+||+++++++++.+.......+++.+++++.++.++|+. .+++.+++++..+..++.+.+.+.+++.....+..|+|
T Consensus 246 R~G~~v~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f 323 (405)
T PRK09148 246 RMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNG--PQDCIAEMRELYKKRRDVLVESFGRAGWDIPPPAASMF 323 (405)
T ss_pred heeeeeCCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCCeeEE
Confidence 9999999999998886543334566778889988888863 23445555544444445554544444432222445778
Q ss_pred EEEEecC-----ChHHHHHHHH-HCCceEeecC---C--CCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 402 IGIEFDV-----SATPVVDACR-DSGLLVLTAG---K--GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 402 ~~i~~~~-----~~~~~~~~l~-~~Gv~v~~~~---~--~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
+|+.++. ...++++.|+ ++||.+.|+. . .+++||++. .+.+++++++++|.+++.++.
T Consensus 324 ~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~--~~~~~l~~al~~l~~~l~~~~ 392 (405)
T PRK09148 324 AWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV--ENEQRIRQAARNIKRFLSSAD 392 (405)
T ss_pred EEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHHH
Confidence 8888732 2467888876 6899999863 1 368999765 578999999999999887653
No 126
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=6e-27 Score=233.19 Aligned_cols=324 Identities=21% Similarity=0.233 Sum_probs=221.5
Q ss_pred CCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHH
Q 012368 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIK 173 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~ 173 (465)
++++++||.++.. ++| .+|.+++++.+.+.... .|+.....++++.++++++ .++|++|+|+++++..+++
T Consensus 30 ~~~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~~----~y~~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~ 102 (367)
T PRK02731 30 GIADIIKLASNEN--PLG-PSPKAIEAIRAAADELH----RYPDGSGFELKAALAEKFGVDPERIILGNGSDEILELLAR 102 (367)
T ss_pred CCCceEEecCCCC--CCC-CCHHHHHHHHHHHHhhc----CCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHH
Confidence 5678999999854 567 57889999998876532 2333334578888888886 6789999999999888777
Q ss_pred HHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEc
Q 012368 174 FARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVE 253 (465)
Q Consensus 174 ~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~e 253 (465)
.... +++.|++.+|+|..+.......+.... . .+. .+. ..|++++++.++++...+++++
T Consensus 103 ~l~~-----------~gd~vl~~~p~y~~~~~~~~~~g~~~~-~---~~~-~~~----~~~~~~l~~~~~~~~~~v~l~~ 162 (367)
T PRK02731 103 AYLG-----------PGDEVIYSEHGFAVYPIAAQAVGAKPV-E---VPA-KDY----GHDLDAMLAAVTPRTRLVFIAN 162 (367)
T ss_pred HhcC-----------CCCEEEEecCCHHHHHHHHHHcCCeEE-E---ecc-cCC----CCCHHHHHHHhCCCCcEEEEeC
Confidence 5531 588999999999766543332221111 1 011 111 1278999999875333444555
Q ss_pred ccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc-cccccccCCcccEE---EecccCC-CccceeeEEe
Q 012368 254 PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LWAHEHYGIFPDIM---TLAKPLA-GGLPIGAALV 328 (465)
Q Consensus 254 p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~-~~~~~~~~~~pdi~---t~sK~lg-~G~~iG~v~~ 328 (465)
|.|++ |. ..+.+.+++|.+.|+ +|+++|+||+|.++.+.+. .......+..++++ +|||.+| +|+|+||+++
T Consensus 163 p~npt-G~-~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~ 239 (367)
T PRK02731 163 PNNPT-GT-YLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIA 239 (367)
T ss_pred CCCCC-Cc-CCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeC
Confidence 55554 44 346666777776664 5999999999987644332 11222222223443 7999998 6999999999
Q ss_pred CHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEec-
Q 012368 329 TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFD- 407 (465)
Q Consensus 329 ~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~- 407 (465)
++++++.+... ..+++.+++++.++.++|+ ..++.+++++.....++.+.+.+..++. ...++.|.++++.++
T Consensus 240 ~~~~~~~l~~~--~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~g~~~~i~~~~ 313 (367)
T PRK02731 240 PPEIIDALNRV--RQPFNVNSLALAAAVAALD---DDAFVEKSRALNAEGMAWLTEFLAELGL-EYIPSVGNFILVDFDD 313 (367)
T ss_pred CHHHHHHHHHc--cCCCCCCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCceEEEEECCC
Confidence 99999888643 2356778888988888875 3445555555555555666665555542 223456889999883
Q ss_pred -CChHHHHHHHHHCCceEeecCC---CCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 408 -VSATPVVDACRDSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 408 -~~~~~~~~~l~~~Gv~v~~~~~---~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
.++.++++.|.++||.+.++.. .+++|++++ +.++++++++.|+++++
T Consensus 314 ~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 314 GKDAAEAYQALLKRGVIVRPVAGYGLPNALRITIG---TEEENRRFLAALKEFLA 365 (367)
T ss_pred CCCHHHHHHHHHHCCEEEEeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHh
Confidence 4678899999999999988642 368999864 78899999999998764
No 127
>PLN02187 rooty/superroot1
Probab=99.96 E-value=9e-27 Score=237.14 Aligned_cols=344 Identities=15% Similarity=0.106 Sum_probs=222.6
Q ss_pred CCCEEEecccCccccc-CCCCCHHHHHHHHHHHhhcccccCCCCC----HHHHHHHHHHHhhcC----CCeEEecCCHHH
Q 012368 96 EGREYLDLSSGIAVNA-LGHGDADWIKAVVDQANVLTHVSNMYYS----IPQIELAKRLVACSF----ADRVFFSNTGTE 166 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~-lGh~~p~v~~a~~~~~~~~~~~~~~~~~----~~~~~la~~l~~~~~----~~~v~~~~sG~e 166 (465)
+++.+|++..+.+... .--.++++.+++.+.++.... ..+.+. +.++++++++.+.++ +++|++|+|+++
T Consensus 64 ~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~ 142 (462)
T PLN02187 64 VNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKG-NSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQ 142 (462)
T ss_pred CCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCC-CCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHH
Confidence 4677888887754311 011457789999988765321 111122 235555555544333 789999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCC
Q 012368 167 ANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGK 246 (465)
Q Consensus 167 A~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~ 246 (465)
|+..+++.+. ++++.|++.+|+|.++...+...+...... ++.+...+ --|+++|+++++++.
T Consensus 143 al~~~~~~l~-----------~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~----~l~~~~~~--~~d~~~l~~~~~~~~ 205 (462)
T PLN02187 143 GIEIVFESLA-----------RPNANILLPRPGFPHYDARAAYSGLEVRKF----DLLPEKEW--EIDLEGIEAIADENT 205 (462)
T ss_pred HHHHHHHHhc-----------CCCCEEEEeCCCCccHHHHHHHcCCEEEEE----eCccccCC--ccCHHHHHHhcCCCc
Confidence 9999999665 268999999999998764443333211110 11110000 027899999987667
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccc-ccccc-CC--cccEEEecccCC-Ccc
Q 012368 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEHY-GI--FPDIMTLAKPLA-GGL 321 (465)
Q Consensus 247 ~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~-~~~~~-~~--~pdi~t~sK~lg-~G~ 321 (465)
.++++++|+|++| .+++.+.+++|.++|++||++||+||+|.+|.+.+..+ ....+ +. ..-+.+|||.++ .|+
T Consensus 206 ~~v~i~nP~NPTG--~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGl 283 (462)
T PLN02187 206 VAMVVINPNNPCG--NVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGW 283 (462)
T ss_pred EEEEEeCCCCCCC--CccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccc
Confidence 7889999987776 45689999999999999999999999999864434221 11111 11 122347999987 599
Q ss_pred ceeeEEeC-H-HH---HhhccCCCCc--CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCcee
Q 012368 322 PIGAALVT-E-KV---ASAINYGDHG--STFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKD 394 (465)
Q Consensus 322 ~iG~v~~~-~-~i---~~~~~~~~~~--~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 394 (465)
|+||++++ + .+ ++.+...... .+.+.+.+++.|+.++|+.. .+++++++++..+..++.+.+.+..++....
T Consensus 284 RiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~-~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~ 362 (462)
T PLN02187 284 KIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKA-DKNFFAKKNKILKHNVDLVCDRLKDIPCVVC 362 (462)
T ss_pred eeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHhhCCCCcC
Confidence 99999983 3 22 2233221111 22245788999999988741 2355555555555555556555555553322
Q ss_pred --eeccceEEEEEecC-------ChHHHHHHH-HHCCceEeecC---CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 395 --VRGLGLIIGIEFDV-------SATPVVDAC-RDSGLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 395 --~~~~g~~~~i~~~~-------~~~~~~~~l-~~~Gv~v~~~~---~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
.+..|+|+++.++. +..+++..+ .++||.+.|+. ..+++||++. .+++.+++++++|.+++++..
T Consensus 363 ~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~--~~~e~l~~al~rL~~~l~~~~ 440 (462)
T PLN02187 363 PKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIG--VEAHMLEDALERLKGFCTRHA 440 (462)
T ss_pred CCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHHhh
Confidence 23446788876631 344665554 68899999863 2478999765 468999999999999998765
Q ss_pred h
Q 012368 462 S 462 (465)
Q Consensus 462 ~ 462 (465)
+
T Consensus 441 ~ 441 (462)
T PLN02187 441 K 441 (462)
T ss_pred h
Confidence 4
No 128
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.96 E-value=1.4e-26 Score=233.31 Aligned_cols=343 Identities=13% Similarity=0.114 Sum_probs=222.1
Q ss_pred CCCCEEEecccCcccc--cCCCCCHHHHHHHHHHHhhcc---cccCCCCCHHHHHHHHHHHhhcC----CCeEEecCCHH
Q 012368 95 AEGREYLDLSSGIAVN--ALGHGDADWIKAVVDQANVLT---HVSNMYYSIPQIELAKRLVACSF----ADRVFFSNTGT 165 (465)
Q Consensus 95 ~dG~~ylD~~~~~~~~--~lGh~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~~----~~~v~~~~sG~ 165 (465)
.+|+..|++..|.+.- .+. .+|.+.+++.+.++... +....+..+.++++++++.+.++ +++|++|+|++
T Consensus 29 ~~~~~~i~l~~G~p~~~~~~~-~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~ 107 (409)
T PLN00143 29 DDHRLAISFGFGDPSCFECFR-TTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCK 107 (409)
T ss_pred CCCCceeeCCCCCCCCCCCCC-CCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChH
Confidence 4577889998876531 122 67888899998877531 11222333446666666665443 68999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCC--CCceEeeCCCHHHHHhhcC
Q 012368 166 EANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVM--PGVNFVEYGNIEATRKLIQ 243 (465)
Q Consensus 166 eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~le~~l~ 243 (465)
+|+..+++.... +++.|++.+|+|+++...+...+..... .+.. .+.. -|+++|+++++
T Consensus 108 ~al~~~~~~l~~-----------~gd~v~v~~P~y~~~~~~~~~~g~~~~~----~~~~~~~~~~----~d~~~l~~~~~ 168 (409)
T PLN00143 108 HAAEIIIKVLAR-----------PEANILLPRPGFPDVETYAIFHHLEIRH----FDLLPEKGWE----VDLDAVEAIAD 168 (409)
T ss_pred HHHHHHHHHHcC-----------CCCEEEEcCCCCcCHHHHHHHcCCEEEE----EeccCCCCCc----CCHHHHHHhcc
Confidence 999999986652 6899999999998876544433321111 1111 1111 28899999987
Q ss_pred CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccc-cccccC---CcccEEEecccCC-
Q 012368 244 PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEHYG---IFPDIMTLAKPLA- 318 (465)
Q Consensus 244 ~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~-~~~~~~---~~pdi~t~sK~lg- 318 (465)
.+..++++++|.|++| ..++.+.+++|.++|++|+++||+||+|.+|...+..+ ....+. ...-+.+|||.++
T Consensus 169 ~~~~~~~~~nP~NPTG--~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~ 246 (409)
T PLN00143 169 ENTIAMVIINPGNPCG--SVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMI 246 (409)
T ss_pred cCCEEEEEECCCCCCC--CccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCC
Confidence 6677888899977666 44589999999999999999999999999875444311 111111 1223347999977
Q ss_pred CccceeeEEeC--HHHH------hhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCC
Q 012368 319 GGLPIGAALVT--EKVA------SAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNP 390 (465)
Q Consensus 319 ~G~~iG~v~~~--~~i~------~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 390 (465)
.|+|+||++++ +.++ +.+........+ .+.+++.++.++|+.. .++++++..+..+..++.+.+.+.+++
T Consensus 247 pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~ 324 (409)
T PLN00143 247 PGWGLGWLVTCDPSGLLQICEIADSIKKALNPAPF-PPTFIQAAIPEILEKT-TEDFFSKTINILRAALAFCYDKLKEIP 324 (409)
T ss_pred CccceEEEEeeCchhhhhhHHHHHHHHHHHhccCC-CCchHHHHHHHHHhcC-hHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 59999999983 3332 222211112223 4778888888888631 123333333333333344444444444
Q ss_pred Cce--eeeccceEEEEEecC-------ChHHHHHHH-HHCCceEeecC---CCCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 391 HVK--DVRGLGLIIGIEFDV-------SATPVVDAC-RDSGLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 391 ~~~--~~~~~g~~~~i~~~~-------~~~~~~~~l-~~~Gv~v~~~~---~~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
... ..+..|.|+|++++. +..+++..+ .++||.+.|+. ..+++||++. .+++++++++++|.+++
T Consensus 325 ~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~--~~~~~l~~al~rl~~~l 402 (409)
T PLN00143 325 CIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFA--VEQSSLEDGLGRLKSFC 402 (409)
T ss_pred CCCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEc--CCHHHHHHHHHHHHHHH
Confidence 322 123347888888841 355666555 68899999864 2478999765 56899999999999999
Q ss_pred HHhhhc
Q 012368 458 PVLDSN 463 (465)
Q Consensus 458 ~~~~~~ 463 (465)
.+..+.
T Consensus 403 ~~~~~~ 408 (409)
T PLN00143 403 GRHAKK 408 (409)
T ss_pred HHhccC
Confidence 776543
No 129
>PRK08068 transaminase; Reviewed
Probab=99.96 E-value=9.4e-27 Score=233.41 Aligned_cols=332 Identities=15% Similarity=0.101 Sum_probs=213.9
Q ss_pred CCEEEecccCcccccCCCCCHHHHHHHHHHHhhccc--c-cCCCCCHHHHHHHHHHHhhcC----CC-eEEecCCHHHHH
Q 012368 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTH--V-SNMYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEAN 168 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~--~-~~~~~~~~~~~la~~l~~~~~----~~-~v~~~~sG~eA~ 168 (465)
|..+|||..+.+ -...+|.+.+++.+.+..... + ...+..+.++++++++.+.++ .+ +|++|+|+++++
T Consensus 31 ~~~~i~l~~~~p---~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l 107 (389)
T PRK08068 31 GHDVINLGQGNP---DQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGL 107 (389)
T ss_pred CCCeEEecCCCC---CCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHH
Confidence 445788887744 234678899999888764211 1 112223335566666554434 45 799999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeE
Q 012368 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA 248 (465)
Q Consensus 169 ~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a 248 (465)
..+++.... +++.|++.+|+|..+...+...+..... .+...+..+. .|++++++.+..+...
T Consensus 108 ~~~~~~~~~-----------~gd~vlv~~P~y~~~~~~~~~~g~~~~~----i~~~~~~~~~--~d~~~l~~~~~~~~~~ 170 (389)
T PRK08068 108 VELPQCLMN-----------PGDTILVPDPGYPDYLSGVALARAQFET----MPLIAENNFL--PDYTKIPEEVAEKAKL 170 (389)
T ss_pred HHHHHHhCC-----------CCCEEEEcCCCCcchHHHHHhcCCEEEE----eecccccCCC--CCHHHHHHhccccceE
Confidence 988775541 6889999999998776554443322111 1221111111 2788999888654445
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc-c-ccccccC---CcccEEEecccCC-Cccc
Q 012368 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-L-WAHEHYG---IFPDIMTLAKPLA-GGLP 322 (465)
Q Consensus 249 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~-~-~~~~~~~---~~pdi~t~sK~lg-~G~~ 322 (465)
+++++|+|++| ..++.+.+++|.++|++||+++|+||+|..|...+. . ......+ ....+.+|||.+| .|+|
T Consensus 171 v~l~~P~NPTG--~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlR 248 (389)
T PRK08068 171 MYLNYPNNPTG--AVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWR 248 (389)
T ss_pred EEEECCCCCCC--CcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccce
Confidence 55666876665 356899999999999999999999999987755442 1 1112122 2234458999998 6999
Q ss_pred eeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccc-eE
Q 012368 323 IGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLG-LI 401 (465)
Q Consensus 323 iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g-~~ 401 (465)
+||+++++++++.+.........+.+++.+.++.++|.. .+.+.+++++..+..++.+.+.+..++. ...++.| .+
T Consensus 249 iG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~r~~~~~~L~~~g~-~~~~~~g~~~ 325 (389)
T PRK08068 249 VAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLS--DQSCVAELVARYESRRNAFISACREIGW-EVDAPKGSFF 325 (389)
T ss_pred eEeEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHCCC-cccCCCeeEE
Confidence 999999999998886433223344455667777776642 2344444444444444445444445543 2334445 55
Q ss_pred EEEEec--CChHHHHHHHHH-CCceEeecC---C--CCEEEEecCCCCcHHHHHHHHHHHHH
Q 012368 402 IGIEFD--VSATPVVDACRD-SGLLVLTAG---K--GNVVRLVPPLIISEQELDQAVEILCK 455 (465)
Q Consensus 402 ~~i~~~--~~~~~~~~~l~~-~Gv~v~~~~---~--~~~lRi~~~~~~t~e~i~~~l~~l~~ 455 (465)
+|+.++ .++.++.+.|++ +||.+.++. . .+++||++. .+++.+.+++++|.+
T Consensus 326 ~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~ 385 (389)
T PRK08068 326 AWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLL--TDEERLREAVERIGK 385 (389)
T ss_pred EEEECCCCCCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEc--CCHHHHHHHHHHHHH
Confidence 688874 357789999986 699998852 1 368999775 467888888888765
No 130
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.96 E-value=7.6e-27 Score=228.63 Aligned_cols=308 Identities=16% Similarity=0.068 Sum_probs=208.2
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARK 177 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~ 177 (465)
.+++|+.+|. +++|...+.+.+ ..+.. |+... .+|.+.|+++++.++|++|+|++||+..++. +.
T Consensus 20 ~~~i~l~~ne--~p~~~~~~~~~~---~~~~~-------yp~~~-~~Lr~~ia~~~~~~~I~it~Gs~~al~~~~~-~~- 84 (330)
T PRK05664 20 ADWLDLSTGI--APWPWPVPAIPA---DAWAR-------LPETD-DGLEAAARAYYGAPQLLPVAGSQAAIQALPR-LR- 84 (330)
T ss_pred HHheeecCCc--CCCCCCCcccCH---HHHHh-------CCCCh-HHHHHHHHHHhCCCCEEECcCHHHHHHHHHH-cc-
Confidence 3578888885 467765444422 22222 33322 6888999999999999999999999987753 11
Q ss_pred HhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCC
Q 012368 178 FQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQG 257 (465)
Q Consensus 178 ~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~ 257 (465)
++++|++.+|+|+++...+...+. .+..+| +++++++++. ...+++++|+||
T Consensus 85 -----------~gd~v~v~~P~y~~~~~~~~~~g~-------------~~~~v~---~~~~~~~~~~-~~~v~l~nP~NP 136 (330)
T PRK05664 85 -----------APGRVGVLSPCYAEHAHAWRRAGH-------------QVRELD---EAEVEAALDS-LDVLVVVNPNNP 136 (330)
T ss_pred -----------CCCEEEEcCCChHHHHHHHHHcCC-------------eEEEec---hhhHhhhhcC-CCEEEEeCCcCC
Confidence 588999999999888755443322 222232 3556666653 346788999877
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCC-CccceeeEEeCHHHHhhc
Q 012368 258 EGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLA-GGLPIGAALVTEKVASAI 336 (465)
Q Consensus 258 ~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~i~~~~ 336 (465)
+|. ..+.+.+++|.++|+++|++||+||+|.++............+...-+.||||.+| .|+|+||+++++++++.+
T Consensus 137 TG~--~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~ 214 (330)
T PRK05664 137 TGR--RFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRAL 214 (330)
T ss_pred CCC--ccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccccCCCcceEEEEeCHHHHHHH
Confidence 664 45888899999999999999999999987732112112221122233458999999 799999999999999888
Q ss_pred cCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCChHHHHHH
Q 012368 337 NYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSATPVVDA 416 (465)
Q Consensus 337 ~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~ 416 (465)
... ..+++.+.+++.++.++|+. ..+.++.++.....++.+.+.+.+++. ....+.++|+++.++ +..++.+.
T Consensus 215 ~~~--~~~~~~~~~~~~~~~~~L~~---~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~~~~~~f~~~~~~-~~~~~~~~ 287 (330)
T PRK05664 215 AEL--LGPWTVSGPTRWLAQAALAD---TPWQRRQRERLLAASQRLAALLRRHGL-TPAGGCALFQWVRTE-DAAALHEF 287 (330)
T ss_pred HHh--cCCCCCCHHHHHHHHHHHhC---hHHHHHHHHHHHHHHHHHHHHHHHCCC-cccCCcceEEEEecC-CHHHHHHH
Confidence 643 23466778888888888863 233334444444444444454444442 222333467777653 56789999
Q ss_pred HHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 417 CRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 417 l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
|.++||.+...+..+++||+++. +.++++++++.|++..++
T Consensus 288 l~~~gi~v~~f~~~~~iRis~~~--~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 288 LARRGILTRLFEQPASLRFGLPA--DEADWARLDQALLAYRKE 328 (330)
T ss_pred HHHCCeEEEECCCCCeEEEECCC--CHHHHHHHHHHHHHHHhh
Confidence 99999999876445789997653 677888888888766543
No 131
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.96 E-value=1.1e-26 Score=229.99 Aligned_cols=327 Identities=16% Similarity=0.157 Sum_probs=217.4
Q ss_pred CCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHH
Q 012368 95 AEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAI 172 (465)
Q Consensus 95 ~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al 172 (465)
.++.+++||..|. +++| .+|.+++|+.+.+.... .|+.....++++.++++++ +++|++++|+++++..++
T Consensus 17 ~~~~~~i~l~~~~--~~~~-~p~~~~~a~~~~~~~~~----~y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~ 89 (356)
T PRK08056 17 ISPDQLLDFSANI--NPLG-MPVSLKRAIIDNLDCAE----RYPDVEYRHLHQALARHHQVPASWILAGNGETESIFAVV 89 (356)
T ss_pred CChhhEEEecccc--CCCC-CCHHHHHHHHHHHHhcc----cCcCccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHH
Confidence 3566789998764 4566 77889999988776532 2344446788888888886 789999999999999888
Q ss_pred HHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEE
Q 012368 173 KFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFV 252 (465)
Q Consensus 173 ~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ 252 (465)
+.+. ++ .+++.+|+|..+...+...+.... . .+...+..+. .| +++++.+.++...++++
T Consensus 90 ~~l~------------~g-~viv~~P~y~~~~~~~~~~g~~~~-~---v~~~~~~~~~--~~-~~~~~~~~~~~k~v~l~ 149 (356)
T PRK08056 90 SGLK------------PR-RAMIVTPGFAEYRRALQQVGCEIR-R---YSLREADGWQ--LT-DAILEALTPDLDCLFLC 149 (356)
T ss_pred HHhC------------CC-CEEEeCCCcHHHHHHHHHcCCeEE-E---EecccccCCC--cc-HHHHHhccCCCCEEEEe
Confidence 8542 34 478889999776644333322111 1 1111111110 13 34445555433445556
Q ss_pred cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccc--cccccCCcccEEEecccCC-CccceeeEEe-
Q 012368 253 EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW--AHEHYGIFPDIMTLAKPLA-GGLPIGAALV- 328 (465)
Q Consensus 253 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~--~~~~~~~~pdi~t~sK~lg-~G~~iG~v~~- 328 (465)
+|.|++| ...+++.+++|.++|++|++++|+||+|.+|...+... .....+...-+.+|||.++ .|+|+||+++
T Consensus 150 ~p~NPTG--~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~ 227 (356)
T PRK08056 150 TPNNPTG--LLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNS 227 (356)
T ss_pred CCcCCCC--CCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecC
Confidence 7766665 35688999999999999999999999999874433211 1122222233457999999 6999999998
Q ss_pred CHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC
Q 012368 329 TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV 408 (465)
Q Consensus 329 ~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~ 408 (465)
++++++.+... ...++.+.+++.++.++|+ .+.+.++.++..+..++.+.+.+..++.+...++.|.++|+.+..
T Consensus 228 ~~~~~~~l~~~--~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 302 (356)
T PRK08056 228 DDAAVARMRRQ--QMPWSINAFAALAGEVILQ---DRAYQQATWQWLAEEGARFYQALCALPLLTVWPGRANYLFLRCER 302 (356)
T ss_pred CHHHHHHHHHh--CCCCchhHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCCCcEEEEEcCC
Confidence 46777777532 3456677888888877774 334444444444444455555555554333445568888888754
Q ss_pred ChHHHHHHHHHCCceEeecCC-----CCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 409 SATPVVDACRDSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 409 ~~~~~~~~l~~~Gv~v~~~~~-----~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
+..++++.|+++||.+.++.. ++++||++. +.++.+.+++.|+++++
T Consensus 303 ~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 303 PDIDLQRALLTQRILIRSCANYPGLDSRYYRVAIR---SAAENERLLAALRNVLT 354 (356)
T ss_pred ChHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEEc---CHHHHHHHHHHHHHHHc
Confidence 567899999999999987631 368999854 77889999999987653
No 132
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.96 E-value=7.9e-27 Score=241.58 Aligned_cols=341 Identities=15% Similarity=0.152 Sum_probs=220.4
Q ss_pred CCCCEEEecccCcccccCCC-CCHHHHHHHHHHHhhccccc-CCCCCHHHHHHHHHHHhhc--C--CCeEEecCCHHHHH
Q 012368 95 AEGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVS-NMYYSIPQIELAKRLVACS--F--ADRVFFSNTGTEAN 168 (465)
Q Consensus 95 ~dG~~ylD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~--~--~~~v~~~~sG~eA~ 168 (465)
..|+.+|+|..|.. .++|. .++.+++++.+++.....+. ..+..+.++++++++.+.. + +++|++|+|++|++
T Consensus 143 ~~g~~~i~l~~G~p-~~~~~~~p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal 221 (517)
T PRK13355 143 AAGTHILKLNIGNP-APFGFRTPDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELI 221 (517)
T ss_pred HcCCCeEEecCcCC-CcCCCCCCHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHH
Confidence 36788999998754 35664 57789999988775432211 1112233455555554332 2 67999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeE
Q 012368 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA 248 (465)
Q Consensus 169 ~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a 248 (465)
.++++++. +++|.|++++|+|..+...+...++..... +...+..+. .|++++++++.++..+
T Consensus 222 ~~~~~~l~-----------~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~----~~~~~~~~~--~d~~~l~~~~~~~~k~ 284 (517)
T PRK13355 222 NLSMSALL-----------DDGDEVLIPSPDYPLWTACVNLAGGTAVHY----RCDEQSEWY--PDIDDIRSKITSRTKA 284 (517)
T ss_pred HHHHHHhC-----------CCCCEEEEcCCCCcCHHHHHHHCCCEEEEe----ecCcccCCC--CCHHHHHHhcCcCceE
Confidence 99988664 268999999999998876554444332211 111111111 2899999999765667
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-ccccccCCccc-----EEEecccCC-Ccc
Q 012368 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAHEHYGIFPD-----IMTLAKPLA-GGL 321 (465)
Q Consensus 249 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~-~~~~~~~~~pd-----i~t~sK~lg-~G~ 321 (465)
+++++|+|++|. +.+.+.+++|.++|++||++||+||+|..|.+.|.. ..... ..++ +-+|||.++ .||
T Consensus 285 i~i~nP~NPTG~--v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~--~~~~~~vi~~~S~SK~~~~~G~ 360 (517)
T PRK13355 285 IVIINPNNPTGA--LYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIAS--LAPDLFCVTFSGLSKSHMIAGY 360 (517)
T ss_pred EEEECCCCCCCc--CcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHH--hCCCCeEEEEecchhhccCccc
Confidence 778888777763 458999999999999999999999999987544421 11111 1123 236899997 499
Q ss_pred ceeeEEeC--HHH----HhhccCCCCcCCCCChHHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHHHHHcCCCcee
Q 012368 322 PIGAALVT--EKV----ASAINYGDHGSTFAGSPLVCNAAIAVLDKISN-PAFLASVSKKGHYFKETLKQKLARNPHVKD 394 (465)
Q Consensus 322 ~iG~v~~~--~~i----~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 394 (465)
|+||++++ +++ ++.+... ....++.|.+++.++.++|+.... +++.+..++..+. ++.+.+.+.+.+.+..
T Consensus 361 RiG~~i~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~-r~~l~~~L~~~~g~~~ 438 (517)
T PRK13355 361 RIGWMILSGNKRIAKDYIEGLNML-ANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQ-RELVYNALNAIPGISA 438 (517)
T ss_pred ceEEEEeeCchhhHHHHHHHHHHH-hcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHH-HHHHHHHHhcCCCccc
Confidence 99999853 443 3333211 223356778899998888853211 2233332223222 4555555556654555
Q ss_pred eeccceEEE-EEecC------ChHHHHH-HHHHCCceEeecC-----CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 395 VRGLGLIIG-IEFDV------SATPVVD-ACRDSGLLVLTAG-----KGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 395 ~~~~g~~~~-i~~~~------~~~~~~~-~l~~~Gv~v~~~~-----~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
..+.|.|+. +.++. +..+++. .|.++||.+.|+. ..+++|+++ ..++++|++++++|.+++...+
T Consensus 439 ~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~--~~~~~~l~~a~~rl~~~~~~~~ 516 (517)
T PRK13355 439 VKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVY--LPRLEDLEDAMDRLADFFSYYR 516 (517)
T ss_pred CCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEe--CCCHHHHHHHHHHHHHHHHHhh
Confidence 556666654 46532 2445554 4668899998863 136899976 5789999999999999987654
No 133
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.8e-26 Score=230.84 Aligned_cols=331 Identities=16% Similarity=0.126 Sum_probs=217.0
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHhhc-ccccC-CCCCHHHHHHHHHHHhhcC----CCeEEecCCHHHHHHHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVL-THVSN-MYYSIPQIELAKRLVACSF----ADRVFFSNTGTEANEAAI 172 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~-~~~~~-~~~~~~~~~la~~l~~~~~----~~~v~~~~sG~eA~~~al 172 (465)
.++||..+.+ .+. .+|.+.+++.+.+... ..+.. .+....++.+++++.+.++ .++|++|+|+++|+..++
T Consensus 30 ~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~ 106 (384)
T PRK06348 30 DIIDLSLGDP--DLI-TDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLAL 106 (384)
T ss_pred CcEEcCCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHH
Confidence 4688888755 343 4577777666544321 11111 1122345666666655433 789999999999999998
Q ss_pred HHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEE
Q 012368 173 KFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFV 252 (465)
Q Consensus 173 ~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ 252 (465)
+++.. +++.|++.+|+|.++...+...+...... +...+..+. .|+++|+++++++...++++
T Consensus 107 ~~~~~-----------~gd~vlv~~p~y~~~~~~~~~~g~~~~~~----~~~~~~~~~--~d~~~l~~~~~~~~~~v~l~ 169 (384)
T PRK06348 107 QSILD-----------PGDEVIIHEPYFTPYKDQIEMVGGKPIIL----ETYEEDGFQ--INVKKLEALITSKTKAIILN 169 (384)
T ss_pred HHhcC-----------CCCEEEEeCCCCcchHHHHHHcCCEEEEe----cCCcCcCCc--CCHHHHHHhhCcCccEEEEe
Confidence 87652 68899999999988876555443321111 111100000 27899999887544455566
Q ss_pred cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccc---ccc-cCCcccEEEecccCC-CccceeeEE
Q 012368 253 EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA---HEH-YGIFPDIMTLAKPLA-GGLPIGAAL 327 (465)
Q Consensus 253 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~---~~~-~~~~pdi~t~sK~lg-~G~~iG~v~ 327 (465)
+|.|++| ..++.+.+++|.++|++||++||+||+|.+|...+.... ... .+...-+.+|||.++ .|+|+||++
T Consensus 170 ~p~NPtG--~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v 247 (384)
T PRK06348 170 SPNNPTG--AVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVI 247 (384)
T ss_pred CCCCCCC--cCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeee
Confidence 6665554 355899999999999999999999999998743332111 111 112233447999999 699999999
Q ss_pred eCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeecc-ceEEEEEe
Q 012368 328 VTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGL-GLIIGIEF 406 (465)
Q Consensus 328 ~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-g~~~~i~~ 406 (465)
+++++++.+.......+++.+++++.++..+|+. .+.+.+++++..+..++.+.+.+...+.+....+. |.++|+.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~~~~ 325 (384)
T PRK06348 248 APDYIIETAKIINEGICFSAPTISQRAAIYALKH--RDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINI 325 (384)
T ss_pred cCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEec
Confidence 9999988876444455678899999999888863 23444444444444344444444444433333343 55667777
Q ss_pred c---CChHHHHHHHH-HCCceEeecCC-----CCEEEEecCCCCcHHHHHHHHHHHHH
Q 012368 407 D---VSATPVVDACR-DSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCK 455 (465)
Q Consensus 407 ~---~~~~~~~~~l~-~~Gv~v~~~~~-----~~~lRi~~~~~~t~e~i~~~l~~l~~ 455 (465)
+ .+..++++.|+ +.||.+.|+.. .+++|++++ .+++++++++++|++
T Consensus 326 ~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~ 381 (384)
T PRK06348 326 KKTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACT--VGIEVLEEAFNRIEK 381 (384)
T ss_pred ccCCCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEec--CCHHHHHHHHHHHHh
Confidence 3 35678898887 56999987631 368999864 588999999999865
No 134
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.96 E-value=1.9e-26 Score=232.72 Aligned_cols=346 Identities=14% Similarity=0.085 Sum_probs=228.5
Q ss_pred EEeCCCCEEEecccCccccc--CCCCCHHHHHHHHHHHhhc--cccc-CCCCCHHHHHHHHHHHhh----------cCCC
Q 012368 92 LYDAEGREYLDLSSGIAVNA--LGHGDADWIKAVVDQANVL--THVS-NMYYSIPQIELAKRLVAC----------SFAD 156 (465)
Q Consensus 92 ~~d~dG~~ylD~~~~~~~~~--lGh~~p~v~~a~~~~~~~~--~~~~-~~~~~~~~~~la~~l~~~----------~~~~ 156 (465)
+.+..|+.+|+|..+.+... +- .++.+.+++.+.+... ..+. ..+..+.++.+++++.+. ...+
T Consensus 27 ~~~~~~~~~i~l~~g~p~~~~~~~-p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~ 105 (412)
T PTZ00433 27 KPSPSPKSIIKLSVGDPTLDGNLL-TPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKD 105 (412)
T ss_pred ccCCCCCCeeecCCcCCCCcCCCC-CCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChh
Confidence 44467888999999876421 22 5788999998877641 1111 112233455666666543 1268
Q ss_pred eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHH
Q 012368 157 RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIE 236 (465)
Q Consensus 157 ~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 236 (465)
+|++|+|+++|+..+++++.. +++.|++.+|+|+.+...+...+..... .+...+..+ --|++
T Consensus 106 ~i~it~G~~~al~~~~~~~~~-----------~gd~vlv~~P~y~~~~~~~~~~g~~~~~----i~~~~~~~~--~~d~~ 168 (412)
T PTZ00433 106 NVVLCSGVSHAILMALTALCD-----------EGDNILVPAPGFPHYETVCKAYGIEMRF----YNCRPEKDW--EADLD 168 (412)
T ss_pred hEEEeCChHHHHHHHHHHhcC-----------CCCEEEEccCCcccHHHHHHHcCCEEEE----EecCccccC--cCCHH
Confidence 999999999999999986652 6889999999998876554433322111 111111000 02789
Q ss_pred HHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-ccccccC-C--cccEEE
Q 012368 237 ATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAHEHYG-I--FPDIMT 312 (465)
Q Consensus 237 ~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~-~~~~~~~-~--~pdi~t 312 (465)
+|+++++++...+++++|+|++| ...+.+.+++|.++|++||++||+||+|.+|-+.+.. .....+. . ..-+.+
T Consensus 169 ~l~~~~~~~~~~i~~~~p~NPtG--~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S 246 (412)
T PTZ00433 169 EIRRLVDDRTKALIMTNPSNPCG--SNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGG 246 (412)
T ss_pred HHHHHhccCceEEEEeCCCCCCC--cccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEcc
Confidence 99988875444556667766665 4458899999999999999999999999987444321 1111111 1 122337
Q ss_pred ecccCC-CccceeeEEe------CHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 012368 313 LAKPLA-GGLPIGAALV------TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQK 385 (465)
Q Consensus 313 ~sK~lg-~G~~iG~v~~------~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~ 385 (465)
|||.++ .|+|+||+++ .+++++.+.... ..+++.+++++.++.++|... .+.+.+++++..+..++.+.+.
T Consensus 247 fSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~r~~l~~~ 324 (412)
T PTZ00433 247 TAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLG-MLVCGPCSVVQAALGEALLNT-PQEHLEQIVAKLEEGAMVLYNH 324 (412)
T ss_pred chhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHh-hccCCCChHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHH
Confidence 999996 5999999997 245666664321 234578899999988888641 2455666655555555666666
Q ss_pred HHcCCCceeee-ccceEEEEEecC-------ChHHHHHHHH-HCCceEeecCC---CCEEEEecCCCCcHHHHHHHHHHH
Q 012368 386 LARNPHVKDVR-GLGLIIGIEFDV-------SATPVVDACR-DSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEIL 453 (465)
Q Consensus 386 ~~~~~~~~~~~-~~g~~~~i~~~~-------~~~~~~~~l~-~~Gv~v~~~~~---~~~lRi~~~~~~t~e~i~~~l~~l 453 (465)
+..+..+.... ..|.|+|+.++. +..++++.|+ ++||.+.++.. .+++|+++. ..++++++++++|
T Consensus 325 L~~~~~~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~l~~al~~l 402 (412)
T PTZ00433 325 IGECIGLSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTIS--RPVEVLREAVERI 402 (412)
T ss_pred HhcCCCCcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEec--CCHHHHHHHHHHH
Confidence 55543333333 347788887742 4578999988 47999988642 478999875 3588999999999
Q ss_pred HHHHHHhh
Q 012368 454 CKTLPVLD 461 (465)
Q Consensus 454 ~~~l~~~~ 461 (465)
.+++++.+
T Consensus 403 ~~~~~~~~ 410 (412)
T PTZ00433 403 KAFCERHK 410 (412)
T ss_pred HHHHHHhc
Confidence 99988655
No 135
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.96 E-value=2.3e-26 Score=227.48 Aligned_cols=321 Identities=18% Similarity=0.164 Sum_probs=220.7
Q ss_pred CEEEecccCcccccCCCC-CHHHHHHHHHHHhhcccccC-----CCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHH
Q 012368 98 REYLDLSSGIAVNALGHG-DADWIKAVVDQANVLTHVSN-----MYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAA 171 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~-~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~a 171 (465)
+.||.|+++.+ |||+ ||+|++|+.++++++.+... ....+...++++.++++++.+.++++++|++++..+
T Consensus 1 ~~~~~~~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~ 77 (349)
T cd06454 1 KKVLNFCSNDY---LGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEAALVFSSGYAANDGV 77 (349)
T ss_pred CCceecccCCc---cccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHH
Confidence 46899999765 9994 99999999999987533211 134566889999999999866678888999999988
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCC----CCe
Q 012368 172 IKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP----GKT 247 (465)
Q Consensus 172 l~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~----~~~ 247 (465)
++.+.. +++.|++.++.|....... ...+ ..+..++..|.++++++++. .++
T Consensus 78 ~~~~~~-----------~gd~Vl~~~~~~~~~~~~~-~~~g------------~~~~~~~~~~~~~le~~i~~~~~~~~~ 133 (349)
T cd06454 78 LSTLAG-----------KGDLIISDSLNHASIIDGI-RLSG------------AKKRIFKHNDMEDLEKLLREARRPYGK 133 (349)
T ss_pred HHHhcC-----------CCCEEEEehhhhHHHHHHH-HHcC------------CceEEecCCCHHHHHHHHHHhhccCCC
Confidence 875541 5788998888765433221 1111 11223344578888888863 457
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCC---ccc-cccccCCcccEE--EecccCCCcc
Q 012368 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTG---YLW-AHEHYGIFPDIM--TLAKPLAGGL 321 (465)
Q Consensus 248 a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g---~~~-~~~~~~~~pdi~--t~sK~lg~G~ 321 (465)
++|++++.++.+|...+ +++|.++|++||+++|+||+|. +|..+ ... .........|++ +++|.+++
T Consensus 134 ~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~livD~a~~-~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-- 206 (349)
T cd06454 134 KLIVTEGVYSMDGDIAP----LPELVDLAKKYGAILFVDEAHS-VGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA-- 206 (349)
T ss_pred eEEEEeccccCCCCccC----HHHHHHHHHHcCCEEEEEcccc-ccccCCCCCChhhhccccccCcEEEeechhhhcc--
Confidence 78888888777787655 8999999999999999999986 33222 111 011111234554 68899975
Q ss_pred ceeeEEeCHHHHhhccCCC--CcCCCCChHHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHHHHHcCCCceeeecc
Q 012368 322 PIGAALVTEKVASAINYGD--HGSTFAGSPLVCNAAIAVLDKISN-PAFLASVSKKGHYFKETLKQKLARNPHVKDVRGL 398 (465)
Q Consensus 322 ~iG~v~~~~~i~~~~~~~~--~~~t~~~~~~~~~aa~a~L~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 398 (465)
+.|++++++++++.+.... ...+.+.++..++++.++|+.+.+ +...+++.++.+.+.+.|.++ ..+.. ..+.
T Consensus 207 ~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~--g~~~~--~~~~ 282 (349)
T cd06454 207 VGGYIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL--GFPVG--GSPS 282 (349)
T ss_pred cCCEEECCHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc--CCccc--CCCC
Confidence 5588999999887765422 222335677888888999987654 456677777777777777653 22211 1122
Q ss_pred ceEEEEEec--CChHHHHHHHHHCCceEeecCC------CCEEEEecCCCCcHHHHHHHHHHHHHH
Q 012368 399 GLIIGIEFD--VSATPVVDACRDSGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEILCKT 456 (465)
Q Consensus 399 g~~~~i~~~--~~~~~~~~~l~~~Gv~v~~~~~------~~~lRi~~~~~~t~e~i~~~l~~l~~~ 456 (465)
+.+.++.+. ....++.+.|.++||.+.+.+. ++.+|++++...+++++++++++|+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 283 HIIPPLIGDDPAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred CcEEEEeCCChHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 333333332 3457799999999999976321 368999999889999999999999764
No 136
>PLN02656 tyrosine transaminase
Probab=99.96 E-value=4.2e-26 Score=229.90 Aligned_cols=342 Identities=15% Similarity=0.150 Sum_probs=223.6
Q ss_pred CCCEEEecccCcccccC-CCCCHHHHHHHHHHHhhcc-c-c-cCCCCCHHHHHHHHHHHhhcC----CCeEEecCCHHHH
Q 012368 96 EGREYLDLSSGIAVNAL-GHGDADWIKAVVDQANVLT-H-V-SNMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEA 167 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~l-Gh~~p~v~~a~~~~~~~~~-~-~-~~~~~~~~~~~la~~l~~~~~----~~~v~~~~sG~eA 167 (465)
.|+.++++..|.+.... -..++.+++++.+.+.... . + ...+....++++++++.+.++ .++|++|+|+++|
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 108 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQA 108 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHH
Confidence 57789999888764322 2367889999988876521 1 1 111222335566666655433 6799999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCe
Q 012368 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKT 247 (465)
Q Consensus 168 ~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 247 (465)
+..++.++.. +++.|++.+|+|..+.......+..... .+..+...+ ..|+++++++++++..
T Consensus 109 l~~~~~~l~~-----------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~----i~~~~~~~~--~~d~~~l~~~~~~~~~ 171 (409)
T PLN02656 109 IDVALSMLAR-----------PGANILLPRPGFPIYELCAAFRHLEVRY----VDLLPEKGW--EVDLDAVEALADQNTV 171 (409)
T ss_pred HHHHHHHHhC-----------CCCeEEEeCCCCCcHHHHHHHcCCEEEE----EeCCCcCCC--CCCHHHHHHHhccCce
Confidence 9999887652 6899999999997664333222221111 111110000 0278999998876667
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccc-cc---cccCCcccEEEecccCC-Cccc
Q 012368 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AH---EHYGIFPDIMTLAKPLA-GGLP 322 (465)
Q Consensus 248 a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~-~~---~~~~~~pdi~t~sK~lg-~G~~ 322 (465)
.+++++|.|++|. ..+.+.+++|.++|++||++||+||+|.+|.+.+..+ .. +.......+.+|||.++ .|+|
T Consensus 172 ~v~l~~P~NPtG~--~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlR 249 (409)
T PLN02656 172 ALVIINPGNPCGN--VYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWR 249 (409)
T ss_pred EEEEECCCCCCCC--CCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCccee
Confidence 7888888776653 4588899999999999999999999999875444221 11 11112223447999977 5999
Q ss_pred eeeEEeC--------HHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCce-
Q 012368 323 IGAALVT--------EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVK- 393 (465)
Q Consensus 323 iG~v~~~--------~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~- 393 (465)
+||++++ +++++.+..... ...+.+.+++.++.++|+.. .+.++++.++..+..++.+.+.+..++...
T Consensus 250 iG~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~ 327 (409)
T PLN02656 250 LGWFVTTDPSGSFRDPKIVERIKKYFD-ILGGPATFIQAAVPTILEQT-DESFFKKTINILKQSSDICCDRIKEIPCITC 327 (409)
T ss_pred EEEEEEeCcccccccHHHHHHHHHHHh-hhcCCCHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHhhCCCCcC
Confidence 9999983 577777653211 12356788999999888732 234455555444444555555555554322
Q ss_pred e-eeccceEEEEEecC-------ChHHH-HHHHHHCCceEeecC---CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 394 D-VRGLGLIIGIEFDV-------SATPV-VDACRDSGLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 394 ~-~~~~g~~~~i~~~~-------~~~~~-~~~l~~~Gv~v~~~~---~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
. .+..|.++|++++. +..++ .+.|.++||.+.|+. ..+++||++. .+++++++++++|++++.+.
T Consensus 328 ~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~--~~~e~l~eal~rl~~~~~~~ 404 (409)
T PLN02656 328 PHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFA--ADPSSLEEALGRIKSFYLRH 404 (409)
T ss_pred CcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHHh
Confidence 1 23346778887731 23344 456678999999873 2468999776 47999999999999988754
No 137
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.96 E-value=3e-26 Score=232.55 Aligned_cols=341 Identities=18% Similarity=0.162 Sum_probs=248.3
Q ss_pred CCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhccc------ccCCCCCHHHHHHHHHHHhhcC----CCeEEecCCH
Q 012368 95 AEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTH------VSNMYYSIPQIELAKRLVACSF----ADRVFFSNTG 164 (465)
Q Consensus 95 ~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~------~~~~~~~~~~~~la~~l~~~~~----~~~v~~~~sG 164 (465)
.+....+||..+.....+ .....+.+++.+.+..... ....+..+.++.+++++....| +++|++|+|.
T Consensus 86 ~~~~~~i~f~~g~p~~~~-fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~ 164 (459)
T COG1167 86 EDDPSVIDFAGGLPDPSL-FPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGA 164 (459)
T ss_pred cCCCceecCCCCCCCccc-CCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCH
Confidence 344678999888743311 1344566666665543211 1112333446677777764444 7799999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCC----CHHHHHh
Q 012368 165 TEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG----NIEATRK 240 (465)
Q Consensus 165 ~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----d~~~le~ 240 (465)
.+|+++++++.. +++|.|++.+|+|++........+-. +..+|.+ |+++|++
T Consensus 165 q~al~l~~~~l~-----------~pGd~v~vE~PtY~~~~~~~~~~g~~-------------~~~vp~d~~G~~~e~le~ 220 (459)
T COG1167 165 QQALDLLLRLLL-----------DPGDTVLVEDPTYPGALQALEALGAR-------------VIPVPVDEDGIDPEALEE 220 (459)
T ss_pred HHHHHHHHHHhC-----------CCCCEEEEcCCCcHHHHHHHHHcCCc-------------EEecCCCCCCCCHHHHHH
Confidence 999999888776 27999999999999887555443311 1112221 7999999
Q ss_pred hcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc-c---ccccccCCcccEEEeccc
Q 012368 241 LIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-L---WAHEHYGIFPDIMTLAKP 316 (465)
Q Consensus 241 ~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~-~---~~~~~~~~~pdi~t~sK~ 316 (465)
+++.++++++++.|...|+....++.+-.++|.++|++||+++|.||+|..|-..+. . .+.+..+.+..+.||||.
T Consensus 221 ~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~ 300 (459)
T COG1167 221 ALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKT 300 (459)
T ss_pred HHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhh
Confidence 998778999999998666555667999999999999999999999999998855543 2 233444566777899999
Q ss_pred CCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCC--Cce-
Q 012368 317 LAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNP--HVK- 393 (465)
Q Consensus 317 lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~~~- 393 (465)
++.|+|+||+++++++++.+....+..+.+.+.+.|.+....|....-+.+..++++..+.-++.+.+.+.++. ...
T Consensus 301 l~PglRlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~ 380 (459)
T COG1167 301 LAPGLRLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATW 380 (459)
T ss_pred cccccceeeeeCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeee
Confidence 99999999999999999998776777888889999888887777322245556666666665666666665553 222
Q ss_pred eeeccceEEEEEec--CChHHHHHHHHHCCceEeecCC--------CCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 394 DVRGLGLIIGIEFD--VSATPVVDACRDSGLLVLTAGK--------GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 394 ~~~~~g~~~~i~~~--~~~~~~~~~l~~~Gv~v~~~~~--------~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
..+..|+++|++++ .+..++.+.++++||.+.+.+. .+.+|++++.. +++++++++++|.+++++..
T Consensus 381 ~~p~gG~flwl~l~~~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~-~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 381 TRPEGGLFLWLELPEGIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSP-SEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred ecCCceEEEEEEcCCCCCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHHHHh
Confidence 23344899999994 3678899999999999988321 24799998855 68899999999999988764
No 138
>PRK09105 putative aminotransferase; Provisional
Probab=99.96 E-value=1.9e-26 Score=229.00 Aligned_cols=318 Identities=17% Similarity=0.135 Sum_probs=217.6
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFA 175 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a 175 (465)
+.++++..|.. +++ .+|.+.+++.+.+.... .|+.....+|++.+++.++ +++|++|+|+++++..+++.+
T Consensus 43 ~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~~----~Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l 115 (370)
T PRK09105 43 EGAVFLNANEC--PLG-PSPAARDAAARSAALSG----RYDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAF 115 (370)
T ss_pred CCcEEecCCCC--CCC-CCHHHHHHHHHHHHHhc----CCCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHH
Confidence 34667666643 455 67899999988765422 2444447788899998887 889999999999999998866
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEccc
Q 012368 176 RKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPI 255 (465)
Q Consensus 176 ~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~ 255 (465)
.. ++++|++.+|+|.++...+...+.... . .+...+.. .|++++++.. ++...+++++|+
T Consensus 116 ~~-----------~gd~Vli~~P~y~~~~~~~~~~g~~~~-~---v~~~~~~~----~d~~~l~~~~-~~~~~v~l~nP~ 175 (370)
T PRK09105 116 TS-----------PTAGLVTADPTYEAGWRAADAQGAPVA-K---VPLRADGA----HDVKAMLAAD-PNAGLIYICNPN 175 (370)
T ss_pred cC-----------CCCEEEEeCCChHHHHHHHHHcCCeEE-E---ecCCCCCC----CCHHHHHhcC-CCCCEEEEeCCC
Confidence 42 688999999999888655443332211 1 11111111 2788887763 334556678887
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccE---EEecccCC-CccceeeEEeCHH
Q 012368 256 QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDI---MTLAKPLA-GGLPIGAALVTEK 331 (465)
Q Consensus 256 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi---~t~sK~lg-~G~~iG~v~~~~~ 331 (465)
|++|- ..+.+.+++|.+.|+ +++++|+||+|..|+.. . ......+..+++ .+|||.+| .|+|+||++++++
T Consensus 176 NPTG~--~~~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~-~-s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~ 250 (370)
T PRK09105 176 NPTGT--VTPRADIEWLLANKP-AGSVLLVDEAYIHFSDA-P-SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPD 250 (370)
T ss_pred CCCCc--CcCHHHHHHHHHhCC-CCcEEEEECchHHhccC-c-chHHHHhhCCCEEEEecccHhhcCCccceeeeecCHH
Confidence 76663 458888999988764 59999999999877432 1 111211223343 37899998 5999999999999
Q ss_pred HHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCChH
Q 012368 332 VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSAT 411 (465)
Q Consensus 332 i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~ 411 (465)
+++.+... ..++.+.+++.++.++|+ ++++.++.++..+..++.+.+.+.+++. ...++.|.|++++++.+..
T Consensus 251 ~i~~l~~~---~~~~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~~~f~~~~~~~~~~ 323 (370)
T PRK09105 251 LLAKLARF---GHNPLPVPAAAAGLASLR---DPKLVPQRRAENAAVREDTIAWLKKKGY-KCTPSQANCFMVDVKRPAK 323 (370)
T ss_pred HHHHHHhc---CCCCcCHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHHHHHHCCC-CcCCCCCcEEEEeCCCCHH
Confidence 99888643 344567778888888776 3455555555555555555555555442 3344667777777655677
Q ss_pred HHHHHHHHCCceEeec--CCCCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 412 PVVDACRDSGLLVLTA--GKGNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 412 ~~~~~l~~~Gv~v~~~--~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
++++.|.++||.+... +.++++|+++. ++++++++++.|++++
T Consensus 324 ~l~~~L~~~gI~v~~~~~~~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 324 AVADAMAKQGVFIGRSWPIWPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred HHHHHHHHCCcEEecCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 8999999999998422 12478999854 6788999999998765
No 139
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.96 E-value=3.1e-26 Score=226.47 Aligned_cols=322 Identities=18% Similarity=0.202 Sum_probs=217.7
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFA 175 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a 175 (465)
.+++||..+.. ++| .+|.+.+++.+.+..... |+.....+|+++++++++ .++|++|+|+++++..++++.
T Consensus 19 ~~~~~l~~~~~--~~~-~p~~~~~a~~~~~~~~~~----Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~ 91 (354)
T PRK06358 19 NMILDFSANIN--PLG-VPESLKQAITENLDKLVE----YPDPDYLELRKRIASFEQLDLENVILGNGATELIFNIVKVT 91 (354)
T ss_pred cceEEecCCCC--CCC-CCHHHHHHHHHHHHhhhc----CCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh
Confidence 45789987653 455 378899999887754322 343345678888888876 789999999999999988853
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEccc
Q 012368 176 RKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPI 255 (465)
Q Consensus 176 ~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~ 255 (465)
. ++.|++.+|+|+.+...+...+.... . .+......+- -| +++.+.+..+...+++++|.
T Consensus 92 ~-------------~~~v~i~~P~y~~~~~~~~~~g~~~~-~---~~~~~~~~~~--~d-~~~~~~~~~~~~~v~~~~P~ 151 (354)
T PRK06358 92 K-------------PKKVLILAPTFAEYERALKAFDAEIE-Y---AELTEETNFA--AN-EIVLEEIKEEIDLVFLCNPN 151 (354)
T ss_pred C-------------CCcEEEecCChHHHHHHHHHcCCeeE-E---EeCccccCCC--cc-HHHHHhhccCCCEEEEeCCC
Confidence 1 35799999999888755433322111 1 1111110000 14 44444454333445678887
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccc-ccccc---CCcccEEEecccCC-CccceeeEEeC-
Q 012368 256 QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEHY---GIFPDIMTLAKPLA-GGLPIGAALVT- 329 (465)
Q Consensus 256 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~-~~~~~---~~~pdi~t~sK~lg-~G~~iG~v~~~- 329 (465)
|++| ..++.+.+++|.++|++|++++|+||+|.+|...+... ..... +...-+.+|||.++ .|+|+||++++
T Consensus 152 NPtG--~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~ 229 (354)
T PRK06358 152 NPTG--QLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN 229 (354)
T ss_pred CCCC--CccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCC
Confidence 6666 34589999999999999999999999999885443211 11111 22233457999999 79999999984
Q ss_pred HHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCC
Q 012368 330 EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS 409 (465)
Q Consensus 330 ~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~ 409 (465)
+.+++.+.... ..++.+.+++.++.++|+ ++.+.++..+..+..++.+.+.+..++.+...++.|.|+++.++ +
T Consensus 230 ~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~~~~~-~ 303 (354)
T PRK06358 230 KNLAEKLLQMR--EPWSINTFADLAGQTLLD---DKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVNFIFFKLE-K 303 (354)
T ss_pred HHHHHHHHHhC--CCCcchHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcceEEEEEcC-c
Confidence 67777775432 357778888998888885 33444444444444455555555555544445567889888874 3
Q ss_pred hHHHHHHHHHCCceEeecCC-----CCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 410 ATPVVDACRDSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 410 ~~~~~~~l~~~Gv~v~~~~~-----~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
..++++.|+++||.+.++.. .+++|++ ..+.++.++++++|++++
T Consensus 304 ~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls---~~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 304 PIDLRKELLKKGILIRSCSNYRGLDENYYRVA---VKSREDNKKLLKALEVIL 353 (354)
T ss_pred hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEE---eCCHHHHHHHHHHHHHHh
Confidence 47899999999999998631 3579997 457889999999998765
No 140
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.96 E-value=2.7e-26 Score=229.78 Aligned_cols=333 Identities=14% Similarity=0.121 Sum_probs=216.3
Q ss_pred CCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcc-c-cc-CCCCCHHHHHHHHHHHhhcC----CC-eEEecCCHHHH
Q 012368 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLT-H-VS-NMYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEA 167 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~-~-~~-~~~~~~~~~~la~~l~~~~~----~~-~v~~~~sG~eA 167 (465)
.|..++||..|.. .++ .++.+.+++.+.+.... . ++ ..+..+.++++++++.+.++ .+ .|++|+|++++
T Consensus 27 ~~~~~~~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~ 103 (383)
T TIGR03540 27 EGVDVISLGIGDP--DLP-TPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEG 103 (383)
T ss_pred cCCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHH
Confidence 3557788888865 344 46789999988765321 1 11 11122346666666665543 34 69999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCe
Q 012368 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKT 247 (465)
Q Consensus 168 ~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 247 (465)
+..+++.+. .+++.|++.+|+|+++...+...+...... +...+..+. .|++++++.+.++..
T Consensus 104 l~~~~~~~~-----------~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v----~~~~~~g~~--~d~~~l~~~~~~~~~ 166 (383)
T TIGR03540 104 IAHIPLAFV-----------NPGDIVLVPDPGYPVYRIGTLFAGGEPYEM----PLKEENGFL--PDFDAIPEDIAKKAK 166 (383)
T ss_pred HHHHHHHhC-----------CCCCEEEEeCCCCcchHHHHHhcCCEEEEE----ecCcccCCc--cCHHHHHhhccccce
Confidence 999888654 268999999999988776554443221111 111110010 278899888865333
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc-cccc-cc---cCCcccEEEecccCC-Ccc
Q 012368 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LWAH-EH---YGIFPDIMTLAKPLA-GGL 321 (465)
Q Consensus 248 a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~-~~~~-~~---~~~~pdi~t~sK~lg-~G~ 321 (465)
.+++++|.|++| ..++.+.+++|.++|++||++||+||+|.++...+. .... .. .+....+.+|||.+| .|+
T Consensus 167 ~v~i~~P~NPtG--~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~Gl 244 (383)
T TIGR03540 167 LMFINYPNNPTG--AVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGW 244 (383)
T ss_pred EEEEeCCCCCcC--ccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccc
Confidence 444455765544 456999999999999999999999999987644332 1111 11 122344568999997 699
Q ss_pred ceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeec-cce
Q 012368 322 PIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRG-LGL 400 (465)
Q Consensus 322 ~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~g~ 400 (465)
|+||+++++++++.+.........+.+.+.+.++.++|+.. +++.+++++..+..++.+.+.+.+++ +....+ .|.
T Consensus 245 RiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~~~ 321 (383)
T TIGR03540 245 RIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGP--QDVVKEIRKIYQRRRDLLLEALKKIG-IDVEKPKATF 321 (383)
T ss_pred eeeEEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhCC-CEecCCCcce
Confidence 99999999999888764322233455667888888887632 34455555544444555555555554 222333 356
Q ss_pred EEEEEec--CChHHHHHHHH-HCCceEeecCC-----CCEEEEecCCCCcHHHHHHHHHHHHH
Q 012368 401 IIGIEFD--VSATPVVDACR-DSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCK 455 (465)
Q Consensus 401 ~~~i~~~--~~~~~~~~~l~-~~Gv~v~~~~~-----~~~lRi~~~~~~t~e~i~~~l~~l~~ 455 (465)
++|+.++ .+..++++.|+ ++||.+.++.. .+++||+++ .+++++.+++++|.+
T Consensus 322 ~~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 322 YVWVPVPEGYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLT--VPDERLEEAVARIKK 382 (383)
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEec--CCHHHHHHHHHHHhh
Confidence 6788874 35678898876 68999997621 368999875 568888888888764
No 141
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.96 E-value=1.9e-26 Score=226.39 Aligned_cols=309 Identities=17% Similarity=0.074 Sum_probs=210.1
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC---CCeEEecCCHHHHHHHHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF---ADRVFFSNTGTEANEAAIKF 174 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~---~~~v~~~~sG~eA~~~al~~ 174 (465)
.+++||.+|. +++|.+.+.+.. ..+ ..|+... .+|+++|+++++ .++|++++|++|++..+.++
T Consensus 24 ~~~i~ls~Ne--np~~~~~~~~~~---~~~-------~~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~~ 90 (339)
T PRK06959 24 DAWLDLSTGI--NPHGYPVPPVPA---DAW-------RRLPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPAL 90 (339)
T ss_pred hhhceeccCC--CCCCCCCCCCCH---HHH-------HhCCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHHh
Confidence 4689999986 578865333321 122 2255554 899999999987 37999999999999865442
Q ss_pred HHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcc
Q 012368 175 ARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEP 254 (465)
Q Consensus 175 a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep 254 (465)
. . ++ +|++.+|+|.++...+...+.. +..++.++ +.+++ ....+++++|
T Consensus 91 -~---~--------~g-~v~v~~P~y~~y~~~~~~~g~~-------------~~~v~~~~-~~~~~----~~~~v~l~nP 139 (339)
T PRK06959 91 -L---P--------RG-RVGIAPLAYSEYAPAFARHGHR-------------VVPLDEAA-DTLPA----ALTHLIVVNP 139 (339)
T ss_pred -c---C--------CC-eEEEcCCCcHHHHHHHHHCCCE-------------EEeecccc-hhccc----cCCEEEEeCC
Confidence 2 1 34 4899999998887555433221 12222222 22222 1246889999
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCC-CccceeeEEeCHHHH
Q 012368 255 IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLA-GGLPIGAALVTEKVA 333 (465)
Q Consensus 255 ~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~i~ 333 (465)
+||+|. ..+.+.+++|.+.|.++++++|+||+|.+|.............-..-+.||||.+| .|+|+||++++++++
T Consensus 140 nNPTG~--~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li 217 (339)
T PRK06959 140 NNPTAE--RLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAAPALL 217 (339)
T ss_pred CCCCCC--CCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhcCCcchheEEEecCHHHH
Confidence 877763 45888899999999999999999999998742211111111111223448999999 799999999999999
Q ss_pred hhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCChHHH
Q 012368 334 SAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSATPV 413 (465)
Q Consensus 334 ~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~ 413 (465)
+.+... ...++.+.+++.++.++|+ +.++.++.++.....++.+.+.+.+++.. +...++|+++.++ +..++
T Consensus 218 ~~l~~~--~~~~~vs~~~q~a~~~~L~---~~~~~~~~~~~~~~~r~~l~~~L~~~g~~--~~~~~~f~~~~~~-~~~~l 289 (339)
T PRK06959 218 AALRDA--LGAWTVSGPARHAVRAAFA---DAAWQAAMRERLAADGARLAALLRAHGFA--VHATPLFSWTDDP-RAAAL 289 (339)
T ss_pred HHHHHh--cCCCCCcHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHCCCC--ccCcceEEEEeCC-CHHHH
Confidence 988743 3456778899999998886 33444455444444445555555444421 2234677787764 56789
Q ss_pred HHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 414 VDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 414 ~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
.+.|.++||+++..+..+++||++ ..+.++++++++.|+++++.+..
T Consensus 290 ~~~l~~~GI~vr~~~~~~~lRisi--~~~~~e~~~l~~al~~~~~~~~~ 336 (339)
T PRK06959 290 HAALARRGIWTRYFAPPPSVRFGL--PADEAEWQRLEDALAECVPTLAA 336 (339)
T ss_pred HHHHHhCCeEEEECCCCCeEEEEC--CCCHHHHHHHHHHHHHHHHHHhh
Confidence 999999999998765456899974 35788999999999998887654
No 142
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.96 E-value=3e-26 Score=226.48 Aligned_cols=330 Identities=15% Similarity=0.059 Sum_probs=213.2
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHhhcC----CC-eEEecCCHHHHHHHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEANEAAI 172 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~----~~-~v~~~~sG~eA~~~al 172 (465)
+.+||.++.+ .++ .+|++.+++.+.......+.. .+..+.++++++++.+.++ .+ +|++|+|+++|+..++
T Consensus 1 ~~~~~~~g~p--~~~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~ 77 (350)
T TIGR03537 1 RLFDFGTGDP--KEP-TPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFP 77 (350)
T ss_pred CeEeccCCCC--CCC-CCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHH
Confidence 3578888765 344 478899999887654222211 1222446667776665544 55 8999999999999887
Q ss_pred HHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCC--CCceEeeCCCHHHHHhhcCCCCeEEE
Q 012368 173 KFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVM--PGVNFVEYGNIEATRKLIQPGKTAAV 250 (465)
Q Consensus 173 ~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~le~~l~~~~~a~v 250 (465)
..+.... ++++.|++.+|+|.++...+...+...... +.. .+.. -|++++++++.++...++
T Consensus 78 ~~~~~~g--------~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v----~~~~~~~~~----~d~~~l~~~~~~~~~~i~ 141 (350)
T TIGR03537 78 LVFIDPE--------EDRRRVIFGTPGYPVYERGALFAGGEPTAV----KLKKEDGFL----LRLEKVEKSILEETKIVW 141 (350)
T ss_pred HHHcCCC--------CCCceEEEcCCCCcchHHHHHhcCCEEEEc----ccCcccCCc----cCHHHHHHhhhhccEEEE
Confidence 7554200 023699999999998887665544332211 111 1111 278999998875444444
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccccccc--CCcccEEEecccCC-CccceeeEE
Q 012368 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHY--GIFPDIMTLAKPLA-GGLPIGAAL 327 (465)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~--~~~pdi~t~sK~lg-~G~~iG~v~ 327 (465)
+++|.|++| ...+.+.+++|.++|++||+++|+||+|..+...+........ +...-+.+|||.++ .|+|+||++
T Consensus 142 i~~p~NPtG--~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~ 219 (350)
T TIGR03537 142 INYPHNPTG--ATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVA 219 (350)
T ss_pred EeCCCCCcC--cccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeee
Confidence 555555554 4468899999999999999999999999865322222111111 11222347899997 599999999
Q ss_pred eCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeecc-ceEEEEEe
Q 012368 328 VTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGL-GLIIGIEF 406 (465)
Q Consensus 328 ~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-g~~~~i~~ 406 (465)
+++++++.+.......+.+.+++++.++.+++. .+++.++.++.....++.+.+.+..++. ....+. |.++|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~r~~l~~~~~~~~~~l~~~g~-~~~~~~g~~~~~~~~ 295 (350)
T TIGR03537 220 GDEKLISFLRKLRANFGVASPDFVQAAAKAAWS---DDNHVLERRKIFKRKRDLFIEFFNKVGL-EYLYPDATFYLWVKV 295 (350)
T ss_pred cCHHHHHHHHHHHHhhccCCCHHHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHHHHHHCCC-cccCCCeEEEEEEEC
Confidence 999988877643333344566677777777664 3444444444444444445444444442 222333 55678887
Q ss_pred c--CChHHHHHHHHHCCceEeecC---C--CCEEEEecCCCCcHHHHHHHHHHHHH
Q 012368 407 D--VSATPVVDACRDSGLLVLTAG---K--GNVVRLVPPLIISEQELDQAVEILCK 455 (465)
Q Consensus 407 ~--~~~~~~~~~l~~~Gv~v~~~~---~--~~~lRi~~~~~~t~e~i~~~l~~l~~ 455 (465)
+ .+..++++.|.++||.+.++. . .+++|+++. .+++++++++++|++
T Consensus 296 ~~~~~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~--~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 296 PSGIDAKDYALRLLENGIVVAPGENFGSGEEGYVRVALV--PTLEECEEALRLWER 349 (350)
T ss_pred CCCCCHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHhc
Confidence 4 357889999999999998753 1 367999753 578999999998865
No 143
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.96 E-value=2.7e-26 Score=229.86 Aligned_cols=332 Identities=13% Similarity=0.102 Sum_probs=214.0
Q ss_pred CCEEEecccCcccccCCCCCHHHHHHHHHHHhhcc-c-ccC-CCCCHHHHHHHHHHHhhcC----CC-eEEecCCHHHHH
Q 012368 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLT-H-VSN-MYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEAN 168 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~-~-~~~-~~~~~~~~~la~~l~~~~~----~~-~v~~~~sG~eA~ 168 (465)
|.+++|+..+.+ .++ .+|.+.+++.+.+.... . ++. .+..+.+.++++++.+.++ .+ .|++|+|+++++
T Consensus 30 ~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i 106 (385)
T PRK09276 30 GVDVISLGIGDP--DLP-TPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGI 106 (385)
T ss_pred CCCEEEecCCCC--CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence 455788888754 233 56789999988775421 1 111 1122346666666665444 44 599999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeE
Q 012368 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA 248 (465)
Q Consensus 169 ~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a 248 (465)
..+++.+. .+++.|++.+|+|.++...+...+.... . .+...+..+. .|++++++.+..+...
T Consensus 107 ~~~~~~~~-----------~~gd~Vl~~~P~y~~~~~~~~~~g~~~~-~---v~~~~~~g~~--~d~~~l~~~~~~~~~~ 169 (385)
T PRK09276 107 AHIPLAFV-----------NPGDVVLVPDPGYPVYKIGTIFAGGEPY-F---MPLKEENGFL--PDLDAIPEDVAKKAKL 169 (385)
T ss_pred HHHHHHhC-----------CCCCEEEEcCCCCcChHHHHHHcCCEEE-E---EecCCCCCCc--CCHHHHHHhccccceE
Confidence 99888664 2689999999999877654443332211 1 1111111111 2788998888654444
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc----ccccc-cCCcccEEEecccCC-Cccc
Q 012368 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL----WAHEH-YGIFPDIMTLAKPLA-GGLP 322 (465)
Q Consensus 249 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~----~~~~~-~~~~pdi~t~sK~lg-~G~~ 322 (465)
+++++|.|++| ..++.+.+++|.++|++||+++|+||+|..|...+.. ...+. .+....+.+|||.+| .|+|
T Consensus 170 v~l~~p~NPtG--~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlR 247 (385)
T PRK09276 170 MFINYPNNPTG--AVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWR 247 (385)
T ss_pred EEEeCCCCCCC--CCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchh
Confidence 55555766655 3458899999999999999999999999887433321 11111 123345568999997 6999
Q ss_pred eeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeec-cceE
Q 012368 323 IGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRG-LGLI 401 (465)
Q Consensus 323 iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~g~~ 401 (465)
+||+++++++++.+.........+.+++.+.++.++|+. .+.+.+++++.....++.+.+.+.+.+. ....+ .|.+
T Consensus 248 iG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~ 324 (385)
T PRK09276 248 IGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNG--PQEVVEELRKIYQERRDILVEGLRKLGL-EVEPPKATFY 324 (385)
T ss_pred heeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcC--cHHHHHHHHHHHHHHHHHHHHHHHhCCC-cccCCCcceE
Confidence 999999999988876432223334566778887777753 2344455555444445555555554442 22233 3555
Q ss_pred EEEEec--CChHHHHHHHH-HCCceEeecCC-----CCEEEEecCCCCcHHHHHHHHHHHHH
Q 012368 402 IGIEFD--VSATPVVDACR-DSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCK 455 (465)
Q Consensus 402 ~~i~~~--~~~~~~~~~l~-~~Gv~v~~~~~-----~~~lRi~~~~~~t~e~i~~~l~~l~~ 455 (465)
+++.++ .+..++.+.|+ ++||.+.++.. .+++||+++ .+++++.+++++|.+
T Consensus 325 ~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 325 VWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALT--VPDERIEEAVERIKK 384 (385)
T ss_pred EEEECCCCCCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeC--CCHHHHHHHHHHHhh
Confidence 788874 35678888887 57999988631 368999765 478888888888753
No 144
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=1.6e-26 Score=229.63 Aligned_cols=319 Identities=17% Similarity=0.175 Sum_probs=214.8
Q ss_pred CCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeEEe-cCCHHHHHHHH
Q 012368 95 AEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFF-SNTGTEANEAA 171 (465)
Q Consensus 95 ~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~-~~sG~eA~~~a 171 (465)
.++++++||..|.. ++| .+|.+++++.+.+.... .|+.....++++.++++++ .+++++ ++|+++++..+
T Consensus 31 ~~~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~----~y~~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~ 103 (361)
T PRK00950 31 IDPESIIKLGSNEN--PLG-PSPKAVEAIEKELSKIH----RYPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTL 103 (361)
T ss_pred CCccceEEccCCCC--CCC-CCHHHHHHHHHHHHhhc----CCCCCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHH
Confidence 35678999998754 566 67889999988766532 2333335788888988887 578888 67888888888
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEE
Q 012368 172 IKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVF 251 (465)
Q Consensus 172 l~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi 251 (465)
++.+. .+++.|++.+|+|..+.......+.... . .+...+.. .|++++++.+.++...+++
T Consensus 104 ~~~~~-----------~~gd~vlv~~p~y~~~~~~~~~~g~~~~-~---~~~~~~~~----~~~~~l~~~~~~~~~~v~~ 164 (361)
T PRK00950 104 MRTFI-----------DPGDEVIIPTPTFSYYEISAKAHGAKPV-Y---AKREEDFS----LDVDSVLNAITEKTKVIFL 164 (361)
T ss_pred HHHhc-----------CCCCEEEEcCCChHHHHHHHHHcCCEEE-E---eecCCCCC----cCHHHHHHHhccCCCEEEE
Confidence 87654 1578999999999776543332222111 0 01111111 2789999988653344555
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccc-ccccCCcccEEEecccCC-CccceeeEEeC
Q 012368 252 VEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA-HEHYGIFPDIMTLAKPLA-GGLPIGAALVT 329 (465)
Q Consensus 252 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~-~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~ 329 (465)
++|.|++ |.+.+ .+++.++|+++|+++|+||+|.+|. .+.... ...++....+.+|||.+| .|+|+||++++
T Consensus 165 ~~p~npt-G~~~~----~~~l~~l~~~~~~~li~De~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~ 238 (361)
T PRK00950 165 CTPNNPT-GNLIP----EEDIRKILESTDALVFVDEAYVEFA-EYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVP 238 (361)
T ss_pred eCCCCCC-CCCcC----HHHHHHHHHHCCcEEEEECchhhhC-ccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCC
Confidence 6665555 44444 5677888899999999999998873 221111 112222233458999998 69999999999
Q ss_pred HHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEec-C
Q 012368 330 EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFD-V 408 (465)
Q Consensus 330 ~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~-~ 408 (465)
+++++.+... ..+++.++++++++.++|+ +.+++++..+.....++.+.+.+. +...+..|.++++.++ .
T Consensus 239 ~~~~~~~~~~--~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~l~----~~~~~~~~~~i~~~~~~~ 309 (361)
T PRK00950 239 EWLIDYYMRA--KTPFSLTRLSQAAAIAALS---DKEYIEKSIEHGIKSREYLYNELP----FKVYPSEANFVLVDVTPM 309 (361)
T ss_pred HHHHHHHHHh--cCCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhhcC----eeECCCcceEEEEECCCC
Confidence 9998877642 3445677888888888775 345555555555555555544332 2223445778888873 4
Q ss_pred ChHHHHHHHHHCCceEeecC-----CCCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 409 SATPVVDACRDSGLLVLTAG-----KGNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 409 ~~~~~~~~l~~~Gv~v~~~~-----~~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
+..++++.|.++||.+.++. ..+++|++++ +.+++++++++|++++
T Consensus 310 ~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 310 TAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred CHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 67889999999999998752 1357999855 7789999999998865
No 145
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.95 E-value=3.1e-26 Score=230.16 Aligned_cols=338 Identities=16% Similarity=0.117 Sum_probs=221.1
Q ss_pred CCEEEecccCcccccCCCCCHHHHHHHHHHHhhccccc--CCCCCHHHHHHHHHHHhhcC----CCeEEecCCHHHHHHH
Q 012368 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS--NMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEANEA 170 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~la~~l~~~~~----~~~v~~~~sG~eA~~~ 170 (465)
+.+++||..+... ++ .+|.+.+++.+.+......+ ..+....+.++++++.+.++ .++|++|+|+++|+..
T Consensus 30 ~~~~~~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 106 (393)
T PRK05764 30 GRDVISLGAGEPD--FD-TPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYN 106 (393)
T ss_pred cCCEEEeCCCCCC--CC-CCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHH
Confidence 3457888888763 32 57889999988876422111 11112234555555544433 5789999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEE
Q 012368 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV 250 (465)
Q Consensus 171 al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~v 250 (465)
++..+.. +++.|++.+|+|.++...+...+...... +..++..+ ..|+++++++++++...++
T Consensus 107 ~~~~~~~-----------~gd~vl~~~p~y~~~~~~~~~~g~~~~~~----~~~~~~~~--~~d~~~l~~~l~~~~~~v~ 169 (393)
T PRK05764 107 AFMALLD-----------PGDEVIIPAPYWVSYPEMVKLAGGVPVFV----PTGEENGF--KLTVEQLEAAITPKTKALI 169 (393)
T ss_pred HHHHhcC-----------CCCEEEecCCCCcchHHHHHHcCCEEEEE----ecCcccCC--cCCHHHHHHhhCccceEEE
Confidence 8886642 58899999999987754443332211110 11111000 0268999999875444556
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-ccc-----cccCCcccEEEecccCC-Cccce
Q 012368 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAH-----EHYGIFPDIMTLAKPLA-GGLPI 323 (465)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~-~~~-----~~~~~~pdi~t~sK~lg-~G~~i 323 (465)
+++|.|++| ...+.+.+++|.++|++||+++|+||+|..+...+.. ... +..+....+.+|||.++ .|+|+
T Consensus 170 ~~~p~NPtG--~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~Ri 247 (393)
T PRK05764 170 LNSPSNPTG--AVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRL 247 (393)
T ss_pred EECCCCCCC--cccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCcccee
Confidence 667766554 3457888999999999999999999999876433321 111 11122233447999999 69999
Q ss_pred eeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccc-eEE
Q 012368 324 GAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLG-LII 402 (465)
Q Consensus 324 G~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g-~~~ 402 (465)
||+++++++++.+.......+.+.+++++.++.+.|+. .+++.+++++.....++.+.+.+.+++.+....+.| .++
T Consensus 248 G~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~ 325 (393)
T PRK05764 248 GYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNG--PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFYV 325 (393)
T ss_pred EEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcC--ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceEE
Confidence 99999999998886433334557788999888888862 234445555555455555555555554333333444 566
Q ss_pred EEEecC-------ChHHHHHHHH-HCCceEeecCC---CCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 403 GIEFDV-------SATPVVDACR-DSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 403 ~i~~~~-------~~~~~~~~l~-~~Gv~v~~~~~---~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
|+.+.. ...++.+.|+ ++||.+.++.. ++++|+++ .++++++++++++|.+++++.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~--~~~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 326 FPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSY--ATSLEDLEEGLERIERFLESL 392 (393)
T ss_pred EEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEe--cCCHHHHHHHHHHHHHHHHhh
Confidence 666632 1367888876 57999987642 37899975 458999999999999998754
No 146
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=2.8e-26 Score=228.84 Aligned_cols=320 Identities=15% Similarity=0.148 Sum_probs=211.7
Q ss_pred CCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHH
Q 012368 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIK 173 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~ 173 (465)
.+..+||+..|.. ++| .+|.+++++.+. ... ..|+.....+|+++++++++ .++|++|+|+++++..+++
T Consensus 50 ~~~~~i~l~~n~~--p~~-~~~~v~~a~~~~-~~~----~~Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~ 121 (380)
T PLN03026 50 KPEDIVKLDANEN--PYG-PPPEVLEALGNM-KFP----YVYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMR 121 (380)
T ss_pred CccceEEccCCCC--CCC-CCHHHHHHHHhh-Hhh----ccCCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHH
Confidence 3567899988754 455 678888887652 111 22444446788899998886 6789999999999999888
Q ss_pred HHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhc-CCCCeEEEEE
Q 012368 174 FARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLI-QPGKTAAVFV 252 (465)
Q Consensus 174 ~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l-~~~~~a~vi~ 252 (465)
.... ++++|++.+|+|+.+...+...+..... .+...+.. .|++++++++ .++...++++
T Consensus 122 ~~~~-----------~gd~Vlv~~P~y~~y~~~~~~~g~~~~~----v~~~~~~~----~d~~~l~~~~~~~~~~~v~l~ 182 (380)
T PLN03026 122 CVLD-----------PGDKIIDCPPTFGMYVFDAAVNGAEVIK----VPRTPDFS----LDVPRIVEAVETHKPKLLFLT 182 (380)
T ss_pred HhcC-----------CCCEEEEcCCChHHHHHHHHHcCCEEEE----eecCCCCC----cCHHHHHHHHhccCCcEEEEe
Confidence 6542 6889999999997665433322221111 11111111 2789999988 4434455556
Q ss_pred cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccc-ccccCCcccEEEecccCC-CccceeeEEeCH
Q 012368 253 EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA-HEHYGIFPDIMTLAKPLA-GGLPIGAALVTE 330 (465)
Q Consensus 253 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~-~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~ 330 (465)
+|+|++| .. .+.+.+++|.+. . +++|+||+|.+|...+.... .+.++...-+.||||.+| .|+|+||+++++
T Consensus 183 ~P~NPTG-~~-~~~~~l~~l~~~---~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~ 256 (380)
T PLN03026 183 SPNNPDG-SI-ISDDDLLKILEL---P-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL 256 (380)
T ss_pred CCCCCCC-CC-CCHHHHHHHHhc---C-CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCH
Confidence 6666555 33 355555555543 3 89999999988743332111 112222223347999999 699999999999
Q ss_pred HHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEec--C
Q 012368 331 KVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFD--V 408 (465)
Q Consensus 331 ~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~--~ 408 (465)
++++.+.... ..++.+.+++.++.++|+ +.++.++.++.....++.+.+.+..++.....+..|+|+++.++ .
T Consensus 257 ~~i~~l~~~~--~~~~~~~~~q~aa~~aL~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~ 331 (380)
T PLN03026 257 SIIEYLWRAK--QPYNVSVAAEVAACAALS---NPKYLEDVKNALVEERERLFGLLKEVPFLEPYPSDANFILCRVTSGR 331 (380)
T ss_pred HHHHHHHHhc--CCCCCCHHHHHHHHHHhh---CHHHHHHHHHHHHHHHHHHHHHHHHCCCCeECCCCCeEEEEECCCCC
Confidence 9998876432 346778889999988886 33444444444444455555555555543334566888888874 3
Q ss_pred ChHHHHHHHHHCCceEeecCC---CCEEEEecCCCCcHHHHHHHHHHHHHH
Q 012368 409 SATPVVDACRDSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKT 456 (465)
Q Consensus 409 ~~~~~~~~l~~~Gv~v~~~~~---~~~lRi~~~~~~t~e~i~~~l~~l~~~ 456 (465)
+..++.+.|+++||.+.++.. .+++||++. +.++++++++.|+++
T Consensus 332 ~~~~~~~~l~~~gI~v~~~~~~~~~~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 332 DAKKLKEDLAKMGVMVRHYNSKELKGYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred CHHHHHHHHHHCCeEEEECCCCCCCCEEEEecC---CHHHHHHHHHHHHHh
Confidence 578899999999999987632 368999754 677888888888653
No 147
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.95 E-value=3.6e-26 Score=229.53 Aligned_cols=335 Identities=14% Similarity=0.008 Sum_probs=215.5
Q ss_pred eCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhccccc-CCCCCHHHHHHHHHHHhhcC------C-CeEEecCCHH
Q 012368 94 DAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS-NMYYSIPQIELAKRLVACSF------A-DRVFFSNTGT 165 (465)
Q Consensus 94 d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~------~-~~v~~~~sG~ 165 (465)
+..|+.++||..|.+ .++ .++.+++++.+.+.....+. ..+..+.++++++++.+.++ . ++|++|+|++
T Consensus 24 ~~~~~~~i~l~~~~p--~~~-~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~ 100 (393)
T TIGR03538 24 PPASKPPIALSIGEP--KHP-TPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTR 100 (393)
T ss_pred hhcCCCeEEecCCCC--CCC-CCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcH
Confidence 346788899988865 344 57889999988765422221 12223446667777755532 3 4799999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCce--EEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcC
Q 012368 166 EANEAAIKFARKFQRHSNPDSKEPATE--FVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ 243 (465)
Q Consensus 166 eA~~~al~~a~~~t~~~~~~~~~~~~~--ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~ 243 (465)
+|+..+++++.. +++. |++.+|+|.++...+...+.... . .+...+..+. .|++++++++.
T Consensus 101 ~al~~~~~~l~~-----------~gd~~~vlv~~P~y~~~~~~~~~~g~~~~-~---v~~~~~~~~~--~d~~~l~~~~~ 163 (393)
T TIGR03538 101 EALFAFAQAVIN-----------PGQAPLVVMPNPFYQIYEGAALLAGAEPY-F---LNCTAENGFL--PDFDAVPESVW 163 (393)
T ss_pred HHHHHHHHHHcC-----------CCCcceEEecCCCCcchHHHHHhcCCeEE-E---eeccccCCCC--CCHHHHHHHHh
Confidence 999999987652 4554 99999999887654333322211 1 1111111111 27888988876
Q ss_pred CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCC--cccc----cccc-----CCcccEEE
Q 012368 244 PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTG--YLWA----HEHY-----GIFPDIMT 312 (465)
Q Consensus 244 ~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g--~~~~----~~~~-----~~~pdi~t 312 (465)
++...+++++|.|++| .+.+.+.+++|.++|++|+++||+||+|..+...+ .... .... +...-+.+
T Consensus 164 ~~~k~i~l~~p~NPtG--~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S 241 (393)
T TIGR03538 164 RRCQLLFVCSPGNPTG--AVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHS 241 (393)
T ss_pred hcceEEEEeCCCCCcC--cccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEec
Confidence 4444555667766665 35589999999999999999999999998774332 1111 1111 11223447
Q ss_pred ecccCC-CccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCC
Q 012368 313 LAKPLA-GGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPH 391 (465)
Q Consensus 313 ~sK~lg-~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 391 (465)
|||.++ .|+|+||+++++++++.+.......+++.+++.+.++.+++. .+++.++.++..+..++.+.+.+..+ .
T Consensus 242 ~SK~~~~~GlRvG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~L~~~-~ 317 (393)
T TIGR03538 242 LSKRSNLPGLRSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWN---DEQHVRENRALYREKFAAVLEILGQV-L 317 (393)
T ss_pred chhhcCCcccceEEEecCHHHHHHHHHHHHhhccCcCHHHHHHHHHHhc---ChHHHHHHHHHHHHHHHHHHHHHHhh-C
Confidence 999877 599999999999998877643333445678888888877774 33444444433333333333333332 1
Q ss_pred ceeeeccceEEEEEecCChHHHHHHHH-HCCceEeecCC-----------CCEEEEecCCCCcHHHHHHHHHHHHHH
Q 012368 392 VKDVRGLGLIIGIEFDVSATPVVDACR-DSGLLVLTAGK-----------GNVVRLVPPLIISEQELDQAVEILCKT 456 (465)
Q Consensus 392 ~~~~~~~g~~~~i~~~~~~~~~~~~l~-~~Gv~v~~~~~-----------~~~lRi~~~~~~t~e~i~~~l~~l~~~ 456 (465)
....+..|.++|++++.+..++++.|+ ++||.+.|+.. .+++||++. .+++++++++++|.++
T Consensus 318 ~~~~p~gg~f~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 318 DLELPDAGFYLWPKVPGDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALV--APLEECVEAAERIRSF 392 (393)
T ss_pred cccCCCeeEEEEEECCCCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEec--CCHHHHHHHHHHHHHh
Confidence 112345588888888645677888886 57999976531 257888654 4789999999999764
No 148
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.95 E-value=6.4e-26 Score=228.21 Aligned_cols=338 Identities=16% Similarity=0.067 Sum_probs=225.2
Q ss_pred CCEEEecccCcccccCCCCCHHHHHHHHHHHhhccc--ccCCCCCHHHHHHHHHHHhhcC----CCeEEecCCHHHHHHH
Q 012368 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTH--VSNMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEANEA 170 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~la~~l~~~~~----~~~v~~~~sG~eA~~~ 170 (465)
|.+++|+..+.+. ++ .+|.+.+++.+.+.+... ....+..+.++++++++.+.++ .++|++|+|+++|+..
T Consensus 32 ~~~~i~l~~g~p~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~ 108 (402)
T PRK06107 32 GRSIVDLTVGEPD--FD-TPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFL 108 (402)
T ss_pred cCCEEEcCCCCCC--CC-CCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHH
Confidence 4457888887653 33 478899999988764221 1112233457788888877655 6789999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEE
Q 012368 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV 250 (465)
Q Consensus 171 al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~v 250 (465)
+++... .+++.|++.+|+|.++.......++..... +...+..+. -|++++++.+.++..+++
T Consensus 109 ~~~~~~-----------~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v----~~~~~~~~~--~~~~~l~~~~~~~~~~v~ 171 (402)
T PRK06107 109 ALMATL-----------EAGDEVIIPAPYWVSYPDMVLANDGTPVIV----ACPEEQGFK--LTPEALEAAITPRTRWLI 171 (402)
T ss_pred HHHHhc-----------CCCCEEEEecCCCcCHHHHHHHcCCEEEEe----cCCcccCCC--CCHHHHHhhcCcCceEEE
Confidence 987543 268899999999887754443332221111 111110110 267899999875555666
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHh-CCEEEEeccccCCCCCCcc-ccccc--cCCccc---EEEecccCC-Cccc
Q 012368 251 FVEPIQGEGGIYSATKEFLQFLRDACDDA-GALLVFDEVQCGLGRTGYL-WAHEH--YGIFPD---IMTLAKPLA-GGLP 322 (465)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~~g~gr~g~~-~~~~~--~~~~pd---i~t~sK~lg-~G~~ 322 (465)
++.|.|++| ..++.+.+++|.++|++| ++++|+||+|..+...+.. ..... .+.... +.+|||.++ .|+|
T Consensus 172 l~~p~NPtG--~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlR 249 (402)
T PRK06107 172 LNAPSNPTG--AVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWR 249 (402)
T ss_pred EECCCCCCC--cCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccc
Confidence 777766665 456889999999999998 9999999999876444421 11111 111122 336799998 6999
Q ss_pred eeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeec-cceE
Q 012368 323 IGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRG-LGLI 401 (465)
Q Consensus 323 iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~g~~ 401 (465)
+||+++++++++.+.......+++.+.+++.++..+|+. .+.+.++.++..+..++.+.+.+++++.+....+ .|.+
T Consensus 250 iG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~ 327 (402)
T PRK06107 250 IGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNG--DQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFY 327 (402)
T ss_pred eeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceE
Confidence 999999999998887654445677889999999888862 2344455444444444555555555543333333 4566
Q ss_pred EEEEec-------------CChHHHHHHHH-HCCceEeecC---CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 402 IGIEFD-------------VSATPVVDACR-DSGLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 402 ~~i~~~-------------~~~~~~~~~l~-~~Gv~v~~~~---~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
+|+.++ .+..+++..|+ ++||.+.|+. ..+++|+++. .+++++++++++|.+.++++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~--~~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 328 LYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIA--TSLETLEEACARIERAVAAL 401 (402)
T ss_pred EeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHhc
Confidence 677652 13456776665 6899999873 2468999776 47999999999999998765
No 149
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=3.4e-26 Score=228.02 Aligned_cols=326 Identities=15% Similarity=0.116 Sum_probs=214.9
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCC----HHHHHHHHHHHhhc------CCCeEEecCCHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYS----IPQIELAKRLVACS------FADRVFFSNTGTEA 167 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~----~~~~~la~~l~~~~------~~~~v~~~~sG~eA 167 (465)
..++|+..|.. +++ .+|.+++++.+.+...... ..|+. ..++++++++.+.+ ..++|++|+|++++
T Consensus 28 ~~~~~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~-~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~a 103 (374)
T PRK02610 28 IQLDRLDTNEF--PYD-LPPDLKQKLAWLYQQGIES-NRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDEL 103 (374)
T ss_pred cceeEecCCCC--CCC-CCHHHHHHHHHHHhhcccc-cCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHH
Confidence 45889988865 455 6788999999876652110 11222 23445555554432 25789999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCC-ceEEEEcCCcccCccccccccCCCCcCCCCCCCCCC-ceEeeCCCHHHHHhhcCC-
Q 012368 168 NEAAIKFARKFQRHSNPDSKEPA-TEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPG-VNFVEYGNIEATRKLIQP- 244 (465)
Q Consensus 168 ~~~al~~a~~~t~~~~~~~~~~~-~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~le~~l~~- 244 (465)
+..++..... ++ +.|++.+|+|.++...+...+...... +...+ .. -|+++|+++++.
T Consensus 104 l~~~~~~~~~-----------~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~----~~~~~~~~----~d~~~l~~~~~~~ 164 (374)
T PRK02610 104 IRSLLIATCL-----------GGEGSILVAEPTFSMYGILAQTLGIPVVRV----GRDPETFE----IDLAAAQSAIEQT 164 (374)
T ss_pred HHHHHHHHcC-----------CCCCeEEEcCCChHHHHHHHHHcCCEEEEe----cCCcccCC----CCHHHHHHHHHhh
Confidence 9877765431 34 479999999988876554443222111 11111 11 278999988863
Q ss_pred --CCeEEE-EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCC-Cc
Q 012368 245 --GKTAAV-FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLA-GG 320 (465)
Q Consensus 245 --~~~a~v-i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg-~G 320 (465)
+++++| +++|.||+| ...+++.+++|.++| ++++||+||+|..|.............-..-+.+|||.+| .|
T Consensus 165 ~~~~~k~i~l~~P~NPTG--~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~G 240 (374)
T PRK02610 165 QNPPVRVVFVVHPNSPTG--NPLTAAELEWLRSLP--EDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAA 240 (374)
T ss_pred cCCCceEEEEeCCCCCCC--CCCCHHHHHHHHhcc--CCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcc
Confidence 345555 456655554 345888899999887 4999999999998742211111111111122458999997 59
Q ss_pred cceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccce
Q 012368 321 LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGL 400 (465)
Q Consensus 321 ~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~ 400 (465)
+|+||+++++++++.+.... ..++.+.+++.++.++|+.. +.+.+++++..+. ++.+.+.+..++.+...+..|.
T Consensus 241 lRiG~~v~~~~l~~~l~~~~--~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~-r~~l~~~L~~~~~~~~~p~~g~ 315 (374)
T PRK02610 241 HRVGYAIGHPELIAVLEKVR--LPYNLPSFSQLAAQLALEHR--QELLAAIPEILQE-RDRLYQALQELPQLRVWPSAAN 315 (374)
T ss_pred cceeeeecCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHH-HHHHHHHHHhCCCcEeCCCcce
Confidence 99999999999998886432 34667888999888888632 3445555554443 4445555555544444456688
Q ss_pred EEEEEec--CChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 401 IIGIEFD--VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 401 ~~~i~~~--~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
|+|+.++ .+..++++.|.++||.+.+.. +++||++. +.+++++++++|++++.++
T Consensus 316 f~~~~l~~~~~~~~~~~~l~~~gi~v~~~~--~~lRls~~---~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 316 FLYLRLSQDAALAALHQALKAQGTLVRHTG--GGLRITIG---TPEENQRTLERLQAALTQL 372 (374)
T ss_pred EEEEeCCCCCCHHHHHHHHHHCCEEEEeCC--CeEEEeCC---CHHHHHHHHHHHHHHHhhc
Confidence 8888874 356789999999999998643 67999754 4577999999999988765
No 150
>PRK12414 putative aminotransferase; Provisional
Probab=99.95 E-value=4.4e-26 Score=228.00 Aligned_cols=327 Identities=17% Similarity=0.144 Sum_probs=212.8
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHhhccc-c-cCCCCCHHHHHHHHHHHhhcCC-----CeEEecCCHHHHHHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTH-V-SNMYYSIPQIELAKRLVACSFA-----DRVFFSNTGTEANEAA 171 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~-~-~~~~~~~~~~~la~~l~~~~~~-----~~v~~~~sG~eA~~~a 171 (465)
.+|||..|.+ .++ .+|.+.+++.+.+..... + ...+..+.++++++++++.++. ++|++|+|+++|+..+
T Consensus 30 ~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~ 106 (384)
T PRK12414 30 DALNLSQGAP--NFA-PDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAA 106 (384)
T ss_pred CeEEcCCCCC--CCC-CCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHH
Confidence 4688888765 344 578899999887654211 1 1122234477888888777662 4799999999999998
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCC-CceEeeCCCHHHHHhhcCCCCeEEE
Q 012368 172 IKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMP-GVNFVEYGNIEATRKLIQPGKTAAV 250 (465)
Q Consensus 172 l~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~le~~l~~~~~a~v 250 (465)
++... .++++|++.+|+|.++...+...+.... . .+... +.. -|++.|+++++++...++
T Consensus 107 ~~~l~-----------~~gd~Vlv~~p~y~~~~~~~~~~g~~~~-~---v~~~~~~~~----~d~~~l~~~l~~~~~~v~ 167 (384)
T PRK12414 107 ISALV-----------HPGDEVIYFEPSFDSYAPIVRLQGATPV-A---IKLSPEDFR----VNWDEVAAAITPRTRMII 167 (384)
T ss_pred HHHhc-----------CCCCEEEEeCCCccchHHHHHHcCCEEE-E---EecCccccc----cCHHHHHhhcCcccEEEE
Confidence 88664 2689999999999776544433322111 0 11111 111 278999999975444455
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccc-cc-cccC---CcccEEEecccCC-Ccccee
Q 012368 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AH-EHYG---IFPDIMTLAKPLA-GGLPIG 324 (465)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~-~~-~~~~---~~pdi~t~sK~lg-~G~~iG 324 (465)
+++|+|++| . .++++.+++|.++|++||+++|+||+|..|...+... .. ...+ ...-+.+|||.++ .|+|+|
T Consensus 168 i~~p~NPTG-~-~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG 245 (384)
T PRK12414 168 VNTPHNPSA-T-VFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVG 245 (384)
T ss_pred EcCCCCCCC-c-CCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEE
Confidence 555655554 3 4588999999999999999999999998864444211 11 1112 1223447999998 699999
Q ss_pred eEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccc-eEEE
Q 012368 325 AALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLG-LIIG 403 (465)
Q Consensus 325 ~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g-~~~~ 403 (465)
|+++++++++.+.......+++.+.+++.++.++|+. .....++++..+..++.+.+.+.+++ +...++.| .++|
T Consensus 246 ~~v~~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~---~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~gg~~~~ 321 (384)
T PRK12414 246 YCLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAE---PASYLGLGAFYQRKRDLLARELAGSR-FELLPSEGSFFML 321 (384)
T ss_pred EEecCHHHHHHHHHHHhheecCCCcHHHHHHHHHhcC---ChHHHHHHHHHHHHHHHHHHHHHhCC-CeecCCCcceEEE
Confidence 9999999988886544445677888999998888752 22222233333333344444444444 22333444 5556
Q ss_pred EEec----CChHHHHH-HHHHCCceEeecC-----C--CCEEEEecCCCCcHHHHHHHHHHHHH
Q 012368 404 IEFD----VSATPVVD-ACRDSGLLVLTAG-----K--GNVVRLVPPLIISEQELDQAVEILCK 455 (465)
Q Consensus 404 i~~~----~~~~~~~~-~l~~~Gv~v~~~~-----~--~~~lRi~~~~~~t~e~i~~~l~~l~~ 455 (465)
+.++ ....+++. .|.++||.+.|+. . .+++||+++ .+++++++++++|.+
T Consensus 322 ~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~--~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 322 ARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFS--KDDATLVEGARRLCS 383 (384)
T ss_pred EcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEec--CCHHHHHHHHHHHhh
Confidence 5663 23456664 4567899998863 1 367999776 368999999999864
No 151
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1e-25 Score=225.69 Aligned_cols=336 Identities=13% Similarity=0.110 Sum_probs=221.1
Q ss_pred EEecccCcccccCCCCCHHHHHHHHHHHhhcc---cccCCCCCHHHHHHHHHHHhhcC-----CCeEEecCCHHHHHHHH
Q 012368 100 YLDLSSGIAVNALGHGDADWIKAVVDQANVLT---HVSNMYYSIPQIELAKRLVACSF-----ADRVFFSNTGTEANEAA 171 (465)
Q Consensus 100 ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~~-----~~~v~~~~sG~eA~~~a 171 (465)
++|+..|... +. .++.+.+|+.+.+.... +....+..+.+.++++++++.++ .++|++|+|+++++..+
T Consensus 29 ~~~l~~g~~~--~~-~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~ 105 (389)
T PRK05957 29 TISLGQGVVS--YP-PPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNA 105 (389)
T ss_pred eEEccCCCCC--CC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHH
Confidence 5777776653 33 56789999988765432 11122233457788888887765 45799999999999888
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEE
Q 012368 172 IKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVF 251 (465)
Q Consensus 172 l~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi 251 (465)
++.... +++.|++.+|+|..+.......+....+ .+...+.. -|+++++++++++...+++
T Consensus 106 ~~~~~~-----------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~----v~~~~~~~----~d~~~l~~~i~~~~klv~~ 166 (389)
T PRK05957 106 ILAITD-----------PGDEIILNTPYYFNHEMAITMAGCQPIL----VPTDDNYQ----LQPEAIEQAITPKTRAIVT 166 (389)
T ss_pred HHHhcC-----------CCCEEEEeCCCCcCHHHHHHhcCCEEEE----eecCCCCC----cCHHHHHHhcCcCceEEEE
Confidence 876541 6889999999997765433322221111 11111111 2789999999754445555
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-cc-cc---ccCCcccEEEecccCC-Cccceee
Q 012368 252 VEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WA-HE---HYGIFPDIMTLAKPLA-GGLPIGA 325 (465)
Q Consensus 252 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~-~~-~~---~~~~~pdi~t~sK~lg-~G~~iG~ 325 (465)
+.|.|++| ...+.+.+++|.++|++||+++|+||+|.+|...+.. .. .. .......+.+|||.+| .|+|+||
T Consensus 167 ~~p~NPtG--~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 244 (389)
T PRK05957 167 ISPNNPTG--VVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGY 244 (389)
T ss_pred eCCCCCCC--cCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEE
Confidence 66655554 3458889999999999999999999999987443321 11 11 1112234557999998 6999999
Q ss_pred EEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCc-eeeec-cceEEE
Q 012368 326 ALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHV-KDVRG-LGLIIG 403 (465)
Q Consensus 326 v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~-~g~~~~ 403 (465)
+++++++++.+.........+.+.+++.++..+|+. .+++.++..+.....++.+.+.+...+.+ ...++ .|.++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~ 322 (389)
T PRK05957 245 MVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQV--GKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCF 322 (389)
T ss_pred EecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEE
Confidence 999999998887543333445667888888887762 12344444333344444444444444322 22223 366778
Q ss_pred EEec--CChHHHHHHHH-HCCceEeecC---C--CCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 404 IEFD--VSATPVVDACR-DSGLLVLTAG---K--GNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 404 i~~~--~~~~~~~~~l~-~~Gv~v~~~~---~--~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
+.+. .+..++++.|+ ++||.+.|+. . ++++|++++. .+++++++++++|.+.++++-+
T Consensus 323 ~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~l~~~~~~l~~~~~~~~~ 388 (389)
T PRK05957 323 LKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGA-LQKATAKEGIERLVQGLKTIVQ 388 (389)
T ss_pred EeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEec-CCHHHHHHHHHHHHHHHHhhhc
Confidence 8773 45778999987 5899999863 1 3589998754 4788999999999999887543
No 152
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.95 E-value=2e-26 Score=206.65 Aligned_cols=336 Identities=18% Similarity=0.210 Sum_probs=240.2
Q ss_pred ceEEEeeeccEEEeCCC--CEEEecccCcccccCCC-CCHHHHHHHHHHHhhcccccCC-----CCCHHHHHHHHHHHhh
Q 012368 81 PVVLASGKGCKLYDAEG--REYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVSNM-----YYSIPQIELAKRLVAC 152 (465)
Q Consensus 81 p~~~~~~~G~~~~d~dG--~~ylD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~~-----~~~~~~~~la~~l~~~ 152 (465)
.-++++.+|..+. ++| +.+|.|+.|.+ ||. +||+|.+|-.+++++++.+... +....+..|+.+|+++
T Consensus 49 erVi~s~q~p~i~-v~G~~k~ilnFcaNnY---LGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqf 124 (417)
T KOG1359|consen 49 ERVITSRQGPTIQ-VKGSDKKILNFCANNY---LGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQF 124 (417)
T ss_pred eeEEeecccceEE-Eeccccceeeeccccc---ccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHH
Confidence 3567788888775 455 57999999766 886 9999999999999986543221 2455688999999999
Q ss_pred cCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC
Q 012368 153 SFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY 232 (465)
Q Consensus 153 ~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (465)
++.|+.++.+++..||..++.+.+. |.+ -|..+.-.|.+....+.+.. .| .+
T Consensus 125 h~rED~ilypscfdANag~feail~-----------ped-AvfSDeLNhASIIdGirLck--ry--------------~h 176 (417)
T KOG1359|consen 125 HGREDTILYPSCFDANAGAFEAILT-----------PED-AVFSDELNHASIIDGIRLCK--RY--------------RH 176 (417)
T ss_pred hCCCceEEeccccccchHHHHHhcC-----------hhh-hhhccccccchhhhhhHHHh--hh--------------cc
Confidence 9999999999999999999987762 333 44455566777665554432 11 11
Q ss_pred CCHHHHHhhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-C-CCCCCccccccccCC-
Q 012368 233 GNIEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC-G-LGRTGYLWAHEHYGI- 306 (465)
Q Consensus 233 ~d~~~le~~l~---~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g-~gr~g~~~~~~~~~~- 306 (465)
-|+..++..+. +.+..+|..+.++++.|.+.| |++|.+|+++||.+|++||.|. | ||.+|.+ .-+.+++
T Consensus 177 ~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP----l~ei~~La~kYgaLlfiDecHaTgf~G~tGrG-t~E~~~vm 251 (417)
T KOG1359|consen 177 VDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP----LEEISQLAKKYGALLFIDECHATGFFGETGRG-TAEEFGVM 251 (417)
T ss_pred chhHHHHHHHHHhhhheEEEEEecceeccCCCccc----HHHHHHHHHhcCcEEEEeecccceeecCCCCC-hHHHhCCC
Confidence 25556665543 457889999999999999988 9999999999999999999975 3 3555544 4556665
Q ss_pred -cccEE--EecccCCCccceeeEEeCHHHHhhccCCCCcCCCC--ChHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHH
Q 012368 307 -FPDIM--TLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFA--GSPLVCNAAIAVLDKI-SNPAFLASVSKKGHYFKE 380 (465)
Q Consensus 307 -~pdi~--t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~--~~~~~~~aa~a~L~~~-~~~~~~~~~~~~~~~l~~ 380 (465)
.+|++ |+||++|| --.||..+++.+++.++......-|+ .+|.....+.++++.+ ......++.+.+.+++++
T Consensus 252 ~~vdiinsTLgKAlGg-a~GGyttgp~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~ 330 (417)
T KOG1359|consen 252 GDVDIINSTLGKALGG-ASGGYTTGPKPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFRE 330 (417)
T ss_pred CcceehhhhhhhhhcC-CCCCCccCChhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 56776 79999985 23388899999999887544333333 3444445555666654 346677888889999988
Q ss_pred HHHHHHHcCCCceeeecc-ceEEEEEec--CChHHHHHHHHHCCceEeecCC------CCEEEEecCCCCcHHHHHHHHH
Q 012368 381 TLKQKLARNPHVKDVRGL-GLIIGIEFD--VSATPVVDACRDSGLLVLTAGK------GNVVRLVPPLIISEQELDQAVE 451 (465)
Q Consensus 381 ~l~~~~~~~~~~~~~~~~-g~~~~i~~~--~~~~~~~~~l~~~Gv~v~~~~~------~~~lRi~~~~~~t~e~i~~~l~ 451 (465)
.++.. .+. +.+. -.+..+.+. ..+.++.++|+++|++|..... ...+|+.++.+||+||||++++
T Consensus 331 ~me~a--Gft----Isg~~hPI~pv~lGda~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~ 404 (417)
T KOG1359|consen 331 FMEAA--GFT----ISGASHPICPVMLGDARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIE 404 (417)
T ss_pred HHHhc--Cce----ecCCCCCccceecccHHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHH
Confidence 87653 111 1110 122223331 3466789999999999863211 2569999999999999999999
Q ss_pred HHHHHHHHh
Q 012368 452 ILCKTLPVL 460 (465)
Q Consensus 452 ~l~~~l~~~ 460 (465)
++.++.+.+
T Consensus 405 Af~~vgr~~ 413 (417)
T KOG1359|consen 405 AFSEVGRFL 413 (417)
T ss_pred HHHHHHHhh
Confidence 999887654
No 153
>PRK06855 aminotransferase; Validated
Probab=99.95 E-value=5e-26 Score=230.64 Aligned_cols=341 Identities=14% Similarity=0.068 Sum_probs=214.2
Q ss_pred CCEEEecccCcccccCCC-CCHHHHHHHHHHHhhcc---cccCCCCCHHHHHHHHHHHhhcC----CCeEEecCCHHHHH
Q 012368 97 GREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLT---HVSNMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEAN 168 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~~----~~~v~~~~sG~eA~ 168 (465)
|+.++++..|.+.. .+. .++.+.+++.+.+.... +....+..+.++.+++++.+..+ +++|++|+|+++|+
T Consensus 31 g~~~~~~~~G~p~~-~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al 109 (433)
T PRK06855 31 GVKITWENIGDPIA-KGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAI 109 (433)
T ss_pred cccccccccCCCcc-cCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHH
Confidence 34455555443311 233 56678888888764421 11122233457777777766544 77999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCcccccc-ccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCC--C
Q 012368 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALA-LTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP--G 245 (465)
Q Consensus 169 ~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--~ 245 (465)
..++. +. ++++.|++.+|+|+++...... .+.... . .+..+...+. .|+++|+++++. .
T Consensus 110 ~~~~~-l~-----------~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v-~---v~~~~~~~~~--~d~~~l~~~~~~~~~ 171 (433)
T PRK06855 110 AKIYG-LL-----------RREARVIGPSPAYSTHSSAEAAHAGYPPV-T---YRLDPENNWY--PDLDDLENKVKYNPS 171 (433)
T ss_pred HHHHH-hc-----------CCCCeEEEeCCCCchHHHHHHHhcCCeEE-E---EecccccCCC--CCHHHHHHHHhcCCC
Confidence 88875 22 1689999999999986533221 121111 0 1111111110 288999999862 2
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-ccc-ccc-C-CcccEEEecccCC-Cc
Q 012368 246 KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAH-EHY-G-IFPDIMTLAKPLA-GG 320 (465)
Q Consensus 246 ~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~-~~~-~~~-~-~~pdi~t~sK~lg-~G 320 (465)
..++++++|.||+| .+++.+.+++|.++|++||++||+||+|.++.+.+.. ... ... + ...-+.+|||.++ .|
T Consensus 172 ~~~i~l~~P~NPTG--~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pG 249 (433)
T PRK06855 172 IAGILLINPDNPTG--AVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPG 249 (433)
T ss_pred ceEEEEECCCCCCC--cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCc
Confidence 35567788877766 4568999999999999999999999999987544421 111 111 1 1233457999998 69
Q ss_pred cceeeEEeC-----H---HHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 012368 321 LPIGAALVT-----E---KVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHV 392 (465)
Q Consensus 321 ~~iG~v~~~-----~---~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 392 (465)
+|+||++++ + .+++.+.... ....+.+.++|.++.++|+...-+++.+++++..+..++.+.+.+.+++.+
T Consensus 250 lRiG~ii~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~ 328 (433)
T PRK06855 250 SRCGWIEVYNADKDEVFKKYINSILNAK-MIEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGL 328 (433)
T ss_pred ceEEEEEEeCCchhhHHHHHHHHHHHhh-ccccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 999999973 2 2334332211 123456788999988888632113455555555555555555656555433
Q ss_pred eeeecc-ceEEEEEecC-----------------------------ChHHHHHH-HHHCCceEeecCC----CCEEEEec
Q 012368 393 KDVRGL-GLIIGIEFDV-----------------------------SATPVVDA-CRDSGLLVLTAGK----GNVVRLVP 437 (465)
Q Consensus 393 ~~~~~~-g~~~~i~~~~-----------------------------~~~~~~~~-l~~~Gv~v~~~~~----~~~lRi~~ 437 (465)
...++. |.++|+.++. +..+++.. +.++||.+.|+.. +..+|+++
T Consensus 329 ~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~ 408 (433)
T PRK06855 329 KVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTL 408 (433)
T ss_pred eccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEE
Confidence 333343 5777887742 13455644 5578999998731 24589877
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHh
Q 012368 438 PLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 438 ~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
+. .++++|++++++|.+++++.
T Consensus 409 ~~-~~~~~i~~~~~~l~~~~~~~ 430 (433)
T PRK06855 409 LE-RDEEKFEWIYQTLAEKIEEY 430 (433)
T ss_pred CC-CcHHHHHHHHHHHHHHHHHH
Confidence 64 48999999999999998764
No 154
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=3.6e-26 Score=226.43 Aligned_cols=322 Identities=15% Similarity=0.143 Sum_probs=212.1
Q ss_pred CCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHH
Q 012368 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKF 174 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~ 174 (465)
++.+|||..+.. +++ .+|.+.+++.+.+.... ..|+.....+|++.++++++ +++|++|+|+++|+..+++.
T Consensus 23 ~~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~~---~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~ 96 (353)
T PRK05387 23 LAKLIKLNTNEN--PYP-PSPKVLEAIRAALGDDL---RLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLA 96 (353)
T ss_pred ccceeeccCCCC--CCC-CCHHHHHHHHHHhhhhh---hcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHH
Confidence 356899998865 455 47889999988776421 22333334678888888876 78899999999999999987
Q ss_pred HHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcc
Q 012368 175 ARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEP 254 (465)
Q Consensus 175 a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep 254 (465)
+.. +++.|++.+|+|..+.......+.... . .+...+.. -|++++++. ...+++++|
T Consensus 97 l~~-----------~gd~vlv~~P~y~~~~~~~~~~g~~~~-~---v~~~~~~~----~d~~~l~~~----~~~v~~~~P 153 (353)
T PRK05387 97 FFN-----------HDRPLLFPDITYSFYPVYAGLYGIPYE-E---IPLDDDFS----IDVEDYLRP----NGGIIFPNP 153 (353)
T ss_pred hcC-----------CCCEEEEeCCCHHHHHHHHHHcCCEEE-E---eecCCCCC----CCHHHHHhc----CCEEEEeCC
Confidence 652 689999999999666543322221111 1 11111111 267777642 345677888
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCC-CccceeeEEeCHHHH
Q 012368 255 IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLA-GGLPIGAALVTEKVA 333 (465)
Q Consensus 255 ~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~i~ 333 (465)
.|++|.+ .+.+.+++|.+.++ ++++|+||+|..|+........+..+...-+.+|||.++ .|+|+||++++++++
T Consensus 154 ~NPtG~~--~~~~~~~~l~~~~~--~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~ 229 (353)
T PRK05387 154 NAPTGIA--LPLAEIERILAANP--DSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELI 229 (353)
T ss_pred CCCCCCC--CCHHHHHHHHHhCC--CcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHH
Confidence 7777643 46666777666543 999999999987742211111122222223347999999 699999999999998
Q ss_pred hhccCCCC-cCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEec-CChH
Q 012368 334 SAINYGDH-GSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFD-VSAT 411 (465)
Q Consensus 334 ~~~~~~~~-~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~-~~~~ 411 (465)
+.+..... ..+++.+.+++.++.++|+ +.++.++.++.....++.+.+.+.+++. ...++.|.++++.++ .+..
T Consensus 230 ~~l~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~ 305 (353)
T PRK05387 230 EALNRVKNSFNSYPLDRLAQAGAIAAIE---DEAYFEETRAKVIATRERLVEELEALGF-EVLPSKANFVFARHPSHDAA 305 (353)
T ss_pred HHHHHhhccCCCCCcCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCCC-eECCCcCcEEEEECCCCCHH
Confidence 88764322 2356778889988888875 2333333333333334444444444443 233455777787764 4677
Q ss_pred HHHHHHHHCCceEeecCC---CCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 412 PVVDACRDSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 412 ~~~~~l~~~Gv~v~~~~~---~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
++++.|.++||.+.+.+. .+++|++++ +.+++++++++|++++.
T Consensus 306 ~~~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 306 ELAAKLRERGIIVRHFNKPRIDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred HHHHHHHHCCEEEEECCCCCCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 899999999999976532 368999764 67899999999998764
No 155
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.95 E-value=2.8e-26 Score=226.50 Aligned_cols=317 Identities=20% Similarity=0.235 Sum_probs=210.2
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFA 175 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a 175 (465)
.+.|||+.+.. +++ .+|++++++.+++..... |+.....++++.++++++ .++|++++|+++++..+++.+
T Consensus 19 ~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~~~----y~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l 91 (346)
T TIGR01141 19 KEVIKLNSNEN--PFG-PPPKAKEALRAEADKLHR----YPDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAF 91 (346)
T ss_pred CceEEccCCCC--CCC-CCHHHHHHHHHhHHHhhc----CCCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHh
Confidence 47999998765 455 578999999988654322 222224678888888876 678999999999998888765
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEccc
Q 012368 176 RKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPI 255 (465)
Q Consensus 176 ~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~ 255 (465)
.. ++++|++.+|+|..+.......+.... . .+...+. ..|++++++++.+ ++++|+++..
T Consensus 92 ~~-----------~gd~v~~~~p~y~~~~~~~~~~g~~~~-~---~~~~~~~----~~d~~~l~~~~~~-~~~~v~l~~p 151 (346)
T TIGR01141 92 LE-----------PGDAVLVPPPTYSMYEISAKIHGAEVV-K---VPLDEDG----QLDLEDILVAIDD-KPKLVFLCSP 151 (346)
T ss_pred cC-----------CCCEEEEcCCCHHHHHHHHHHcCCeEE-E---eccCCCC----CCCHHHHHHhcCC-CCCEEEEeCC
Confidence 41 578999999998654432222221111 0 1111111 1388999998765 3455554433
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEE---EecccCC-CccceeeEEeCHH
Q 012368 256 QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM---TLAKPLA-GGLPIGAALVTEK 331 (465)
Q Consensus 256 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~---t~sK~lg-~G~~iG~v~~~~~ 331 (465)
++.+|.. .+.+.++++.+.|+ +|+++|+||+|.++...+... ......++++ ++||.++ .|+|+||++++++
T Consensus 152 ~NptG~~-~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~~~--~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~ 227 (346)
T TIGR01141 152 NNPTGNL-LSRSDIEAVLERTP-EDALVVVDEAYGEFSGEPSTL--PLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAE 227 (346)
T ss_pred CCCCCCC-CCHHHHHHHHHhCC-CCcEEEEECchhhhcCCccHH--HHHhhCCCEEEEehhhHhhhchhhhceeeecCHH
Confidence 3444544 46666666666665 699999999998774322211 1111123333 6899997 4899999999999
Q ss_pred HHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCChH
Q 012368 332 VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSAT 411 (465)
Q Consensus 332 i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~ 411 (465)
+++.+... ..+++.+++++.++.++++.. ++.++.++.....++.+.+.+++++.+...+..|.+++++++.+..
T Consensus 228 ~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~~~~ 302 (346)
T TIGR01141 228 IIDALNKV--RAPFNLSRLAQAAAIAALRDD---DFIEKTVEEINAERERLYDGLKKLPGLEVYPSDANFVLIRFPRDAD 302 (346)
T ss_pred HHHHHHhc--cCCCCCCHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHHHHHhcCCCEECCCcCCEEEEecCCCHH
Confidence 98888643 235677889999888877632 2344444444444444444444454333444567888888744678
Q ss_pred HHHHHHHHCCceEeecCC----CCEEEEecCCCCcHHHHHHHHHHH
Q 012368 412 PVVDACRDSGLLVLTAGK----GNVVRLVPPLIISEQELDQAVEIL 453 (465)
Q Consensus 412 ~~~~~l~~~Gv~v~~~~~----~~~lRi~~~~~~t~e~i~~~l~~l 453 (465)
++.+.|.++||.+.++.. ++++|++++ ++++++++++.|
T Consensus 303 ~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~---~~~~i~~~~~~l 345 (346)
T TIGR01141 303 ALFEALLEKGIIVRDLNSYPGLPNCLRITVG---TREENDRFLAAL 345 (346)
T ss_pred HHHHHHHHCCeEEEeCCCcCCCCCeEEEecC---CHHHHHHHHHHh
Confidence 899999999999988642 478999854 789999998876
No 156
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.95 E-value=8.3e-26 Score=226.87 Aligned_cols=332 Identities=14% Similarity=0.085 Sum_probs=211.5
Q ss_pred CCEEEecccCcccccCCCCCHHHHHHHHHHHhhcc---cccCCCCCHHHHHHHHHHHhhcC----CC-eEEecCCHHHHH
Q 012368 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLT---HVSNMYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEAN 168 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~~----~~-~v~~~~sG~eA~ 168 (465)
|..++||..+.+ .+..++.+.+++.+.+.... +....+..+.++++++++.+.++ .+ .|++|+|+++|+
T Consensus 34 g~~~i~l~~g~p---~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al 110 (394)
T PRK05942 34 GLDLIDLGMGNP---DGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGL 110 (394)
T ss_pred CCCeEEcCCCCC---CCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHH
Confidence 556789987644 33355668888777664321 11111122346666666655444 55 589999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeE
Q 012368 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA 248 (465)
Q Consensus 169 ~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a 248 (465)
..++..+. .++++|++.+|+|.++...+...+..... .+...+..+ ..|++++++.+.++...
T Consensus 111 ~~~~~~~~-----------~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~----v~~~~~~~~--~~d~~~l~~~~~~~~k~ 173 (394)
T PRK05942 111 THLALAYV-----------NPGDVVLVPSPAYPAHFRGPLIAGAQIYP----IILKPENDW--LIDLSSIPEEVAQQAKI 173 (394)
T ss_pred HHHHHHhC-----------CCCCEEEEcCCCCcchHHHHHHcCCEEEE----eecCCccCC--ccCHHHHHHhccccceE
Confidence 99888654 26899999999998876544333221110 111111100 02789999888754344
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc-ccc---cc-ccCCcccEEEecccCC-Cccc
Q 012368 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LWA---HE-HYGIFPDIMTLAKPLA-GGLP 322 (465)
Q Consensus 249 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~-~~~---~~-~~~~~pdi~t~sK~lg-~G~~ 322 (465)
+++++|.|++| ..++.+.+++|.++|++||+++|+||+|..|...+. ... .. ..+....+.+|||.++ .|+|
T Consensus 174 i~l~~P~NPtG--~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlR 251 (394)
T PRK05942 174 LYFNYPSNPTT--ATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWR 251 (394)
T ss_pred EEEcCCCCCCC--CcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhh
Confidence 44455766665 446889999999999999999999999987744332 111 11 1123344568999997 6999
Q ss_pred eeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeec-cceE
Q 012368 323 IGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRG-LGLI 401 (465)
Q Consensus 323 iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~g~~ 401 (465)
+||+++++++++.+........++.+.+++.++.++|+.. +.+.+++++..+..++.+.+.+...+. ...++ .|.+
T Consensus 252 iG~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~L~~~~~-~~~~~~~~~f 328 (394)
T PRK05942 252 VGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQLP--DSYLQQVQERYRTRRDFLIQGLGELGW-NIPPTKATMY 328 (394)
T ss_pred eeeeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHCCC-eecCCCeeeE
Confidence 9999999999988875433345667778888888888632 334444444444444444444444442 22333 3557
Q ss_pred EEEEec--CChHHHHHHHH-HCCceEeecC-----CCCEEEEecCCCCcHHHHHHHHHHHHH
Q 012368 402 IGIEFD--VSATPVVDACR-DSGLLVLTAG-----KGNVVRLVPPLIISEQELDQAVEILCK 455 (465)
Q Consensus 402 ~~i~~~--~~~~~~~~~l~-~~Gv~v~~~~-----~~~~lRi~~~~~~t~e~i~~~l~~l~~ 455 (465)
+|+.++ .+..++...++ ++||.+.++. ..+++|++++ .+.+.+.+++++|.+
T Consensus 329 ~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~ 388 (394)
T PRK05942 329 LWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI--ADCDRLGEALDRLKQ 388 (394)
T ss_pred EEEECCCCCCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 888874 34567777654 7899998752 1368999875 456777777777754
No 157
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.95 E-value=8e-26 Score=224.72 Aligned_cols=320 Identities=15% Similarity=0.087 Sum_probs=207.3
Q ss_pred CCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC-----CCeEEecCCHHHHHHH
Q 012368 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-----ADRVFFSNTGTEANEA 170 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-----~~~v~~~~sG~eA~~~ 170 (465)
++..++||..+.+ ....+|.+++++.+......+....+....++.+++++.+.++ .++|++|+|+++++..
T Consensus 25 ~~~~~i~l~~~~p---~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~ 101 (364)
T PRK07865 25 HPDGIVDLSVGTP---VDPVPPVIQEALAAAADAPGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAW 101 (364)
T ss_pred cCCCEEEcCCCCC---CCCCCHHHHHHHHHHHhhCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHH
Confidence 3345788887754 2334678888887765432222122223447778888776533 6799999999999988
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEE
Q 012368 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV 250 (465)
Q Consensus 171 al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~v 250 (465)
++.++. . .+++.|++.+|+|.++...+...+ ...++++++++++. .++++|
T Consensus 102 ~~~~l~--~--------~~gd~Vl~~~p~y~~~~~~~~~~g---------------~~~~~~~~~~~l~~----~~~~~v 152 (364)
T PRK07865 102 LPTLLG--L--------GPGDVVVIPELAYPTYEVGARLAG---------------ATVVRADSLTELGP----QRPALI 152 (364)
T ss_pred HHHHHc--C--------CCCCEEEECCCCcccHHHHHHhcC---------------CEEEecCChhhCCc----ccceEE
Confidence 766541 1 168899999999987754433222 11222234444432 244555
Q ss_pred EE-cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccc-ccc------cCCcccEEEecccCC-Ccc
Q 012368 251 FV-EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA-HEH------YGIFPDIMTLAKPLA-GGL 321 (465)
Q Consensus 251 i~-ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~-~~~------~~~~pdi~t~sK~lg-~G~ 321 (465)
++ +|.|++| .+.+.+.+++|.++|++||++||+||+|.++...+.... ... .+...-+.+|||.++ .|+
T Consensus 153 ~~~~p~NPtG--~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl 230 (364)
T PRK07865 153 WLNSPSNPTG--RVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGY 230 (364)
T ss_pred EEcCCCCCCC--ccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCce
Confidence 54 4555544 345889999999999999999999999998754443211 111 011222447999997 599
Q ss_pred ceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceE
Q 012368 322 PIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLI 401 (465)
Q Consensus 322 ~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~ 401 (465)
|+||+++++++++.+........++.+++.+.++.++|+ ++++.++.++.....++.+.+.+.+++.....+..|.+
T Consensus 231 RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 307 (364)
T PRK07865 231 RAGFVAGDPALVAELLEVRKHAGMMVPAPVQAAMVAALG---DDAHVREQRERYARRRAVLRPALEAAGFRVDHSEAGLY 307 (364)
T ss_pred eeEEEecCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCccEE
Confidence 999999999998887643334456678888888877775 33444444444444455555555554422122233556
Q ss_pred EEEEecCChHHHHHHHHHCCceEeecC-----CCCEEEEecCCCCcHHHHHHHHHHHH
Q 012368 402 IGIEFDVSATPVVDACRDSGLLVLTAG-----KGNVVRLVPPLIISEQELDQAVEILC 454 (465)
Q Consensus 402 ~~i~~~~~~~~~~~~l~~~Gv~v~~~~-----~~~~lRi~~~~~~t~e~i~~~l~~l~ 454 (465)
+|+.++....++.+.|.++||.+.|+. ..+++||+++. +++++++++++|.
T Consensus 308 ~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~~~~~~~~l~ 363 (364)
T PRK07865 308 LWATRGEDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA--TDERIAAAVERLA 363 (364)
T ss_pred EEEeCCCCHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC--CHHHHHHHHHHhh
Confidence 777765556778889999999998753 13689997653 6899999999885
No 158
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.95 E-value=6.4e-26 Score=228.31 Aligned_cols=340 Identities=12% Similarity=0.090 Sum_probs=218.3
Q ss_pred CCEEEecccCcccc--cCCCCCHHHHHHHHHHHhhccc--c-cCCCCCHHHHHHHHHHHhhc---CCCeEEecCCHHHHH
Q 012368 97 GREYLDLSSGIAVN--ALGHGDADWIKAVVDQANVLTH--V-SNMYYSIPQIELAKRLVACS---FADRVFFSNTGTEAN 168 (465)
Q Consensus 97 G~~ylD~~~~~~~~--~lGh~~p~v~~a~~~~~~~~~~--~-~~~~~~~~~~~la~~l~~~~---~~~~v~~~~sG~eA~ 168 (465)
|+.++++..+.+.. .++ .++.+.+++.+.+..... + ...+..+.++++++++.+.. ..++|++|+|+++|+
T Consensus 30 ~~~~i~l~~g~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al 108 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLP-TDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAI 108 (401)
T ss_pred CCCeeecCCCCCCCcCCCC-CCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHH
Confidence 45778888876532 244 568899999887765211 1 11111222444555444321 267899999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeE
Q 012368 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA 248 (465)
Q Consensus 169 ~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a 248 (465)
..+++++.. +++.|++.+|+|..+...+...+..... .+...+..+ --|++.+++.++.+...
T Consensus 109 ~~~~~~l~~-----------~gd~v~i~~P~y~~~~~~~~~~g~~v~~----~~~~~~~~~--~~d~~~l~~~~~~~~~~ 171 (401)
T TIGR01264 109 EMCIAALAN-----------AGQNILVPRPGFPLYETLAESMGIEVKL----YNLLPDKSW--EIDLKQLESLIDEKTAA 171 (401)
T ss_pred HHHHHHhCC-----------CCCEEEEeCCCChhHHHHHHHcCCEEEE----eecCCccCC--CCCHHHHHHHhccCceE
Confidence 999886652 6889999999998776444333321111 011111000 02789999888754445
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-ccc-cccCC--cccEEEecccCC-Cccce
Q 012368 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAH-EHYGI--FPDIMTLAKPLA-GGLPI 323 (465)
Q Consensus 249 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~-~~~-~~~~~--~pdi~t~sK~lg-~G~~i 323 (465)
+++++|.|++|. ..+.+.+++|.++|+++|+++|+||+|.+|.+.+.. ... ..... ..-+.+|||.++ .|+|+
T Consensus 172 v~~~~p~NPtG~--~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRi 249 (401)
T TIGR01264 172 LIVNNPSNPCGS--VFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRL 249 (401)
T ss_pred EEEcCCCCCCCC--CCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceE
Confidence 556677666653 458899999999999999999999999987544421 111 11111 122347999977 59999
Q ss_pred eeEEeCH------HHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCce-eee
Q 012368 324 GAALVTE------KVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVK-DVR 396 (465)
Q Consensus 324 G~v~~~~------~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~ 396 (465)
||+++++ ++++.+.... ...++.+++++.++.++|+.. .++++++.++.....++.+.+.+..++.+. ..+
T Consensus 250 G~iv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~a~~~~l~~~-~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p 327 (401)
T TIGR01264 250 GWIIIHDRRGILRDIRDGLVKLS-QRILGPCTIVQGALPSILLRT-PQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMP 327 (401)
T ss_pred EEEEecCcchhHHHHHHHHHHHh-hccCCCCcHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCC
Confidence 9999873 3444443211 124566888999988888642 245555555555555555555555554333 235
Q ss_pred ccceEEEEEecC-------ChHHHHHHHH-HCCceEeecC---CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 397 GLGLIIGIEFDV-------SATPVVDACR-DSGLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 397 ~~g~~~~i~~~~-------~~~~~~~~l~-~~Gv~v~~~~---~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
..|+|+|+.++. +..++++.|+ ++||.+.|+. ..+++|+++. .+++++++++++|.++++++
T Consensus 328 ~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~--~~~~~l~~~l~rl~~~~~~~ 400 (401)
T TIGR01264 328 SGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLT--VPVVMMEEACSRIQEFCERH 400 (401)
T ss_pred CeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEc--CCHHHHHHHHHHHHHHHhcc
Confidence 568888988631 3567888886 7899998864 2478999765 46899999999999988653
No 159
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.95 E-value=5.6e-26 Score=227.94 Aligned_cols=337 Identities=16% Similarity=0.112 Sum_probs=219.6
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHhhccc-c-cCCCCCHHHHHHHHHHHhhcC----CCeEEecCCHHHHHHHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTH-V-SNMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEANEAAI 172 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~-~-~~~~~~~~~~~la~~l~~~~~----~~~v~~~~sG~eA~~~al 172 (465)
.++||..+.+ .++ .++.+.+++.+.+..... + ...+....++++++++.+.++ .++|++|+|+++|+..++
T Consensus 34 ~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~ 110 (391)
T PRK08361 34 NVISLGIGEP--DFD-TPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAF 110 (391)
T ss_pred CeEEcCCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHH
Confidence 4688888765 344 367888998887654211 1 111222334555555544333 679999999999999988
Q ss_pred HHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEE
Q 012368 173 KFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFV 252 (465)
Q Consensus 173 ~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ 252 (465)
+.+.. +++.|++.+|+|.++...+...+. .... .+...+..+ ..|++++++.++++...++++
T Consensus 111 ~~l~~-----------~g~~Vlv~~p~y~~~~~~~~~~g~-~~~~---v~~~~~~~~--~~d~~~l~~~i~~~~~~v~i~ 173 (391)
T PRK08361 111 ESLLE-----------EGDEVIIPDPAFVCYVEDAKIAEA-KPIR---IPLREENEF--QPDPDELLELITKRTRMIVIN 173 (391)
T ss_pred HHhcC-----------CCCEEEEcCCCCcccHHHHHHcCC-EEEE---EecCCccCC--CCCHHHHHHhcccccEEEEEe
Confidence 86641 688999999999877643332221 1111 111111000 037899999997654555666
Q ss_pred cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc-ccccccc--CCcccEEEecccCC-CccceeeEEe
Q 012368 253 EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LWAHEHY--GIFPDIMTLAKPLA-GGLPIGAALV 328 (465)
Q Consensus 253 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~-~~~~~~~--~~~pdi~t~sK~lg-~G~~iG~v~~ 328 (465)
.|.|++| . ..+.+.+++|.++|+++++++|+||+|.+|...+. ....... +...-+.+|||.+| .|+|+||+++
T Consensus 174 ~p~NPtG-~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~ 251 (391)
T PRK08361 174 YPNNPTG-A-TLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIA 251 (391)
T ss_pred CCCCCCC-c-CcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhcc
Confidence 6766554 3 45888899999999999999999999987743322 1111111 11222347899998 6999999999
Q ss_pred CHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeecc-ceEEEEEec
Q 012368 329 TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGL-GLIIGIEFD 407 (465)
Q Consensus 329 ~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-g~~~~i~~~ 407 (465)
++++++.+.......+++.+.+.+.++..+|+.....++.++.++..+..++.+.+.++.++.+....+. |.++|+.+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l~ 331 (391)
T PRK08361 252 PEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANID 331 (391)
T ss_pred CHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEECC
Confidence 9998887754323345667888888888888642222345555555555555555555555444434444 456777773
Q ss_pred ---CChHHHHHHHH-HCCceEeecC---C--CCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 408 ---VSATPVVDACR-DSGLLVLTAG---K--GNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 408 ---~~~~~~~~~l~-~~Gv~v~~~~---~--~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
.+..++.+.|+ ++||.+.|+. . .+++|+++. .+++++++++++|.+++++
T Consensus 332 ~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 332 ETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYA--TSKEKLIEAMERMEKALEE 390 (391)
T ss_pred CCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHhc
Confidence 35778888887 4799998753 1 368999765 4788999999999988864
No 160
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=4.3e-26 Score=226.03 Aligned_cols=322 Identities=18% Similarity=0.129 Sum_probs=214.1
Q ss_pred CCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--C-CeEEecCCHHHHHHHHHH
Q 012368 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--A-DRVFFSNTGTEANEAAIK 173 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~-~~v~~~~sG~eA~~~al~ 173 (465)
++.++|+..|.. +++ .+|.+++++.+.+..... ..|+.....+|++.++++++ . ++|++++|+++++..+++
T Consensus 25 ~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~--~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~ 99 (356)
T PRK04870 25 ATGMVKLDAMEN--PYR-LPAELRAELGERLAEVAL--NRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLAL 99 (356)
T ss_pred CCCceeCcCCCC--CCC-CCHHHHHHHHHHhhcccc--ccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHH
Confidence 467888877744 565 678999999988764211 22333335678888888876 2 489999999999999888
Q ss_pred HHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEE-EE
Q 012368 174 FARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV-FV 252 (465)
Q Consensus 174 ~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~v-i~ 252 (465)
++.. +++.|++.+|+|.++...+...+..... .+...+.. .|++++++++...++++| ++
T Consensus 100 ~~~~-----------~gd~vlv~~P~y~~~~~~~~~~g~~~~~----i~~~~~~~----~d~~~l~~~~~~~~~~~v~l~ 160 (356)
T PRK04870 100 ACAK-----------PGATVLAPEPGFVMYRMSAKLAGLEFVG----VPLTADFT----LDLPAMLAAIAEHRPALVFLA 160 (356)
T ss_pred HhcC-----------CCCEEEECCCCHHHHHHHHHHcCCEEEE----ecCCCCCC----CCHHHHHHHhhcCCCCEEEEc
Confidence 6642 6899999999998876544333322111 12111111 278999999864344444 55
Q ss_pred cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCC-ccceeeEEeCHH
Q 012368 253 EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAG-GLPIGAALVTEK 331 (465)
Q Consensus 253 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~-G~~iG~v~~~~~ 331 (465)
+|.|++| ...+.+.+++|.++| ++++|+||+|..|...........++....+.+||| ++. |+|+||++++++
T Consensus 161 ~p~NPtG--~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~ 234 (356)
T PRK04870 161 YPNNPTG--NLFDDADVERIIEAA---PGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHPA 234 (356)
T ss_pred CCCCCCC--CCCCHHHHHHHHHHC---CCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCCHH
Confidence 5765554 345788888888888 789999999988743211111122222233457999 764 999999999999
Q ss_pred HHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCChH
Q 012368 332 VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSAT 411 (465)
Q Consensus 332 i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~ 411 (465)
+++.+.... ..++.+.+++.++..+++. .+..++..+.....++.+.+.+...+.+...+..|.++++.++ +..
T Consensus 235 ~i~~~~~~~--~~~~~~~~~q~~a~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~-~~~ 308 (356)
T PRK04870 235 WIAELDKVR--PPYNVNVLTQATALFALEH---VDVLDAQAAQLRAERTRLAAALAALPGVTVFPSAANFILVRVP-DAA 308 (356)
T ss_pred HHHHHHHcc--CCCcCCHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCeEEEEECC-CHH
Confidence 998886432 3456788888888877763 2223333333333344444444444433444566788888875 567
Q ss_pred HHHHHHHHCCceEeecCC-----CCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 412 PVVDACRDSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 412 ~~~~~l~~~Gv~v~~~~~-----~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
++.+.|.++||.+.++.. .+++|++++ +.+++++++++|++++
T Consensus 309 ~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 309 AVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG---TPEENAQFLAALKAAL 356 (356)
T ss_pred HHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC---CHHHHHHHHHHHHHhC
Confidence 889999999999987531 368999755 7889999999998753
No 161
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.3e-25 Score=226.02 Aligned_cols=340 Identities=13% Similarity=0.102 Sum_probs=218.8
Q ss_pred CCCEEEecccCcccccCCCCCHHHHHHHHHHHhhc---ccccCCCCCHHHHHHHHHHHhhcC----CC-eEEecCCHHHH
Q 012368 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVL---THVSNMYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEA 167 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~---~~~~~~~~~~~~~~la~~l~~~~~----~~-~v~~~~sG~eA 167 (465)
.|..++||..+.+. +..++.+.+++.+.+... .+....+....+..+++++.+.++ .+ +|++|+|+++|
T Consensus 31 ~~~~~~~l~~g~p~---~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~a 107 (403)
T PRK08636 31 AGEDIIDFSMGNPD---GPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEG 107 (403)
T ss_pred cCCCEEEcCCcCCC---CCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHH
Confidence 45567888877543 334566777777665431 111112223346777777766544 45 79999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHH----HHHhhcC
Q 012368 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIE----ATRKLIQ 243 (465)
Q Consensus 168 ~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----~le~~l~ 243 (465)
+..++++.. .+++.|++.+|+|.++...+...+...... +. ....+.. -|++ .++++++
T Consensus 108 l~~~~~~l~-----------~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~-~~~~~~~----~d~~~l~~~l~~~~~ 170 (403)
T PRK08636 108 YVHLVQAIT-----------NPGDVAIVPDPAYPIHSQAFILAGGNVHKM-PL-EYNEDFE----LDEDQFFENLEKALR 170 (403)
T ss_pred HHHHHHHhC-----------CCCCEEEEcCCCCcchHHHHHhcCCEEEEE-ec-cccccCc----cChhhhhhHHHHHHh
Confidence 999998665 268999999999988876554443221110 00 0001111 1333 5566664
Q ss_pred C--CCeE-EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc----cccccc-CCcccEEEecc
Q 012368 244 P--GKTA-AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL----WAHEHY-GIFPDIMTLAK 315 (465)
Q Consensus 244 ~--~~~a-~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~----~~~~~~-~~~pdi~t~sK 315 (465)
. .++. .+++.|.||+| ..++.+.+++|.++|++|+++||+||+|..+-..+.. ...+.. +....+.+|||
T Consensus 171 ~~~~~~~~i~~~~P~NPTG--~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK 248 (403)
T PRK08636 171 ESSPKPKYVVVNFPHNPTT--ATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSK 248 (403)
T ss_pred hccCCceEEEEeCCCCCCC--ccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEeccc
Confidence 2 2344 44555677666 3458999999999999999999999999987433321 111111 22223447999
Q ss_pred cCC-CccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCcee
Q 012368 316 PLA-GGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKD 394 (465)
Q Consensus 316 ~lg-~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 394 (465)
.++ .|+|+||+++++++++.+........++.+.+.+.++..+++. .+.+.+++++.....++.+.+.+...+....
T Consensus 249 ~~~~~GlRiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 326 (403)
T PRK08636 249 SYNMAGWRVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDG--DQSCVEEIRETYRKRRDVLIESFANAGWELQ 326 (403)
T ss_pred ccCCccceeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 997 6999999999999988876433323455666777777666642 2445555555555555555555555443222
Q ss_pred eeccceEEEEEecC-----ChHHHHHHHH-HCCceEeecC---C--CCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 395 VRGLGLIIGIEFDV-----SATPVVDACR-DSGLLVLTAG---K--GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 395 ~~~~g~~~~i~~~~-----~~~~~~~~l~-~~Gv~v~~~~---~--~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
.+..|.++|+.++. +..+++..++ ++||.+.|+. . .+++||++. .+++++++++++|.++++.++
T Consensus 327 ~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~~~rl~~~l~~~~ 402 (403)
T PRK08636 327 KPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI--ENENRIRQAARNIKKFLKELE 402 (403)
T ss_pred CCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHhhc
Confidence 34468888888842 2467887765 6899998862 1 368999775 589999999999999987643
No 162
>PRK08363 alanine aminotransferase; Validated
Probab=99.95 E-value=2.3e-25 Score=224.00 Aligned_cols=340 Identities=16% Similarity=0.087 Sum_probs=218.6
Q ss_pred CCCEEEecccCcccc-cCCCCCHHHHHHHHHHHhhccc-c-cCCCCCHHHHHHHHHHHhhcC----CCeEEecCCHHHHH
Q 012368 96 EGREYLDLSSGIAVN-ALGHGDADWIKAVVDQANVLTH-V-SNMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEAN 168 (465)
Q Consensus 96 dG~~ylD~~~~~~~~-~lGh~~p~v~~a~~~~~~~~~~-~-~~~~~~~~~~~la~~l~~~~~----~~~v~~~~sG~eA~ 168 (465)
+|..++|+..+.+.. .++ .+|.+.+++.+.+..... + ...+..+.++.+++++.+.++ .++|++|+|+++|+
T Consensus 28 ~~~~~i~l~~g~p~~~~~~-p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 106 (398)
T PRK08363 28 KGIKVIRLNIGDPVKFDFQ-PPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEAL 106 (398)
T ss_pred cCCCeEEEeCCCCCcCCCC-CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHH
Confidence 467899999988642 454 578899999887764311 1 111222334555555544333 67899999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCC-CCceEeeCCCHHHHHhhcCCCCe
Q 012368 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVM-PGVNFVEYGNIEATRKLIQPGKT 247 (465)
Q Consensus 169 ~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~le~~l~~~~~ 247 (465)
..+++.+. ++++.|++.+|+|.++...+...+...... .+.. .+.. .|++++++++.++..
T Consensus 107 ~~~~~~~~-----------~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~---~~~~~~~~~----~d~~~l~~~~~~~~~ 168 (398)
T PRK08363 107 QLIFGALL-----------DPGDEILIPGPSYPPYTGLVKFYGGVPVEY---RTIEEEGWQ----PDIDDIRKKITEKTK 168 (398)
T ss_pred HHHHHHhC-----------CCCCEEEEcCCCCcchHHHHHHcCCEEEEe---ccccccCCc----CCHHHHHhhCCcceE
Confidence 99988664 268999999999988875544433222111 0111 1111 278899998875445
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccC---CcccEEEecccCC-Cccce
Q 012368 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYG---IFPDIMTLAKPLA-GGLPI 323 (465)
Q Consensus 248 a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~---~~pdi~t~sK~lg-~G~~i 323 (465)
.+++++|.|++| ...+.+.+++|.++|++||+++|+||+|.++...+......... ...-+.+|||.++ .|+|+
T Consensus 169 ~v~l~~p~NPtG--~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRi 246 (398)
T PRK08363 169 AIAVINPNNPTG--ALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRL 246 (398)
T ss_pred EEEEECCCCCCC--cCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceE
Confidence 566667766655 34588899999999999999999999998764333221111111 1122347999976 59999
Q ss_pred eeEEe--CHHHHhhccCC---CCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeecc
Q 012368 324 GAALV--TEKVASAINYG---DHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGL 398 (465)
Q Consensus 324 G~v~~--~~~i~~~~~~~---~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 398 (465)
||+++ ++++++.+... .....++.+.+++.++.++|+. .+++.++.++.....++.+.+.+.+++.+....+.
T Consensus 247 G~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~ 324 (398)
T PRK08363 247 GYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTG--PMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQ 324 (398)
T ss_pred EEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCC
Confidence 99997 66655544321 1123467788899998888863 24455555554455555555555555444333444
Q ss_pred ceE-EEEEecC----ChHHHH-HHHHHCCceEeecCC-----CCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 399 GLI-IGIEFDV----SATPVV-DACRDSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 399 g~~-~~i~~~~----~~~~~~-~~l~~~Gv~v~~~~~-----~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
|.| +|+.++. ...+++ +.|.++||.+.++.. .+++|+++. .+++++++++++|.+++.+.
T Consensus 325 g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~~~~~ 395 (398)
T PRK08363 325 GAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFL--PPVEILEEAMDRFEEFMRER 395 (398)
T ss_pred eEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 554 4446632 345565 445789999987631 368999763 57899999999999988653
No 163
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.95 E-value=1.1e-25 Score=223.14 Aligned_cols=319 Identities=17% Similarity=0.094 Sum_probs=206.4
Q ss_pred CCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC-----CCeEEecCCHHHHHHH
Q 012368 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-----ADRVFFSNTGTEANEA 170 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-----~~~v~~~~sG~eA~~~ 170 (465)
++.+++|+.++.+. ...+|.+.+++.+......+....+..+.++++++++.+.++ .++|++|+|+++++..
T Consensus 19 ~~~~~i~l~~~~p~---~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~ 95 (357)
T TIGR03539 19 HPDGIVDLSVGTPV---DPVPPLIRAALAAAADAPGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAW 95 (357)
T ss_pred CCCCeEEccCCCCC---CCCCHHHHHHHHHHHhhCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHH
Confidence 44567899887542 235688888887765432222222233446777777766533 5899999999999998
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEE
Q 012368 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV 250 (465)
Q Consensus 171 al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~v 250 (465)
+++++. . .+++.|++.+|+|.++...+...+. ..++.+|++.++ ..++++|
T Consensus 96 ~~~~l~--~--------~~gd~Vl~~~p~y~~~~~~~~~~g~---------------~~~~v~~~~~l~----~~~~~~v 146 (357)
T TIGR03539 96 LPTLLG--L--------GPGDTVVIPELAYPTYEVGALLAGA---------------TPVAADDPTELD----PVGPDLI 146 (357)
T ss_pred HHHHHc--C--------CCCCEEEECCCCcHHHHHHHHhcCC---------------EEeccCChhhcC----ccCccEE
Confidence 777542 1 1689999999999877644332221 112223444432 2244555
Q ss_pred EE-cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccc-ccc------cCCcccEEEecccCC-Ccc
Q 012368 251 FV-EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA-HEH------YGIFPDIMTLAKPLA-GGL 321 (465)
Q Consensus 251 i~-ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~-~~~------~~~~pdi~t~sK~lg-~G~ 321 (465)
++ +|.|++| ...+.+.+++|.++|++||+++|+||+|.+|.+.+.... ... .....-+.+|||.++ .|+
T Consensus 147 ~~~~p~NPtG--~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~ 224 (357)
T TIGR03539 147 WLNSPGNPTG--RVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGY 224 (357)
T ss_pred EEeCCCCCcC--ccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCce
Confidence 54 5555554 345889999999999999999999999987754443211 110 111122337999996 599
Q ss_pred ceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceE
Q 012368 322 PIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLI 401 (465)
Q Consensus 322 ~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~ 401 (465)
|+||+++++++++.+........++.+.+++.++.++|+ ++.+.++.++..+..++.+.+.+.+.+.....+..|.+
T Consensus 225 R~G~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p~~~~~ 301 (357)
T TIGR03539 225 RAGFVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALG---DDGHVAEQKARYAARRAQLKPALEKAGFRIDHSEAGLY 301 (357)
T ss_pred eEEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCccEE
Confidence 999999999998887643334456778888888887775 33334444444444444444444444422122223556
Q ss_pred EEEEecCChHHHHHHHHHCCceEeecCC-----CCEEEEecCCCCcHHHHHHHHHHH
Q 012368 402 IGIEFDVSATPVVDACRDSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEIL 453 (465)
Q Consensus 402 ~~i~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~lRi~~~~~~t~e~i~~~l~~l 453 (465)
+|+.++.+..++.+.|.++||.+.|+.. .+++|++++. +++++++++++|
T Consensus 302 ~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~--~~~~i~~~~~~l 356 (357)
T TIGR03539 302 LWATRGEDAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTA--TDERIAAAVARL 356 (357)
T ss_pred EEEECCCCHHHHHHHHHhCCEEECCccccCCCCCCeEEEEecC--CHHHHHHHHHhh
Confidence 6776655667788999999999988631 3689998754 688999999876
No 164
>PRK08912 hypothetical protein; Provisional
Probab=99.95 E-value=1.2e-25 Score=225.33 Aligned_cols=332 Identities=17% Similarity=0.142 Sum_probs=218.0
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC--CCCCHHHHHHHHHHHhhcC----CC-eEEecCCHHHHHHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN--MYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEANEAA 171 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~la~~l~~~~~----~~-~v~~~~sG~eA~~~a 171 (465)
..+||..+.+. ++ .+|.+.+++.+.+......+. .+..+.++.+++++.+.++ ++ +|++|+|+++|+..+
T Consensus 27 ~~i~l~~g~p~--~~-~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 103 (387)
T PRK08912 27 GAINLGQGFPD--DP-GPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAA 103 (387)
T ss_pred CeEEccCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHH
Confidence 46888888764 33 467888888877653211111 1122345666666655444 55 899999999999888
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCC-CceEeeCCCHHHHHhhcCCCCeEEE
Q 012368 172 IKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMP-GVNFVEYGNIEATRKLIQPGKTAAV 250 (465)
Q Consensus 172 l~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~le~~l~~~~~a~v 250 (465)
+..... +++.|++.+|+|.++...+...+..... .+... +.. -|++++++.+.++...++
T Consensus 104 ~~~~~~-----------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~----~~~~~~~~~----~~~~~l~~~~~~~~~~v~ 164 (387)
T PRK08912 104 LLALVE-----------PGDEVVLFQPLYDAYLPLIRRAGGVPRL----VRLEPPHWR----LPRAALAAAFSPRTKAVL 164 (387)
T ss_pred HHHhcC-----------CCCEEEEeCCCchhhHHHHHHcCCEEEE----EecCcccCc----CCHHHHHHHhCccceEEE
Confidence 886541 6889999999998776544333322111 11111 111 278999998875445666
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccc--cccccC---CcccEEEecccCC-Ccccee
Q 012368 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW--AHEHYG---IFPDIMTLAKPLA-GGLPIG 324 (465)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~--~~~~~~---~~pdi~t~sK~lg-~G~~iG 324 (465)
+++|.|++| ...+.+.+++|.++|++|++++|+||+|..+...+... .....+ ...-+.+|||.++ .|+|+|
T Consensus 165 l~~p~NPtG--~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG 242 (387)
T PRK08912 165 LNNPLNPAG--KVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVG 242 (387)
T ss_pred EeCCCCCcC--cccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeE
Confidence 677766665 34588999999999999999999999998764333211 111112 2223447899999 799999
Q ss_pred eEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeecc-ceEEE
Q 012368 325 AALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGL-GLIIG 403 (465)
Q Consensus 325 ~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-g~~~~ 403 (465)
|+++++++++.+........++.++..+.++.++|.. .+++.+++++..+..++.+.+.+..++. ....+. |.++|
T Consensus 243 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~g~~~l~ 319 (387)
T PRK08912 243 FVCAAPPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGK--PDDYFEGMRADLARSRDRLAAGLRRIGF-PVLPSQGTYFLT 319 (387)
T ss_pred EEecCHHHHHHHHHHHhhccccCChHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHHhCCC-cccCCCcceEEE
Confidence 9999999998876443344566777778887777752 3444445555444445555555544442 223333 55677
Q ss_pred EEec-----CChHHHHHHHH-HCCceEeecC-------CCCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 404 IEFD-----VSATPVVDACR-DSGLLVLTAG-------KGNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 404 i~~~-----~~~~~~~~~l~-~~Gv~v~~~~-------~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
+.++ .+..++++.|+ ++||.+.|+. ..+++|++++. +++++++++++|.+++++
T Consensus 320 ~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~--~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 320 VDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK--RDATLDEAVERLAAARRR 386 (387)
T ss_pred ecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC--CHHHHHHHHHHHHHHHhc
Confidence 7763 24667898886 5799998853 13689997664 689999999999988753
No 165
>PRK05839 hypothetical protein; Provisional
Probab=99.95 E-value=8.1e-26 Score=225.21 Aligned_cols=329 Identities=13% Similarity=0.025 Sum_probs=214.3
Q ss_pred CCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHhhcC----CCeEEecCCHHHHHHH
Q 012368 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACSF----ADRVFFSNTGTEANEA 170 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~----~~~v~~~~sG~eA~~~ 170 (465)
.|+.++||..|.+. ++ .++.+.+++.+.......+.. .+....++++++++.+.++ .++|++|+|+++|+..
T Consensus 22 ~~~~~i~l~~~~p~--~~-~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~ 98 (374)
T PRK05839 22 KEYKGLDLTIGEPQ--FE-TPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFN 98 (374)
T ss_pred CCCCeEEcCCCCCC--CC-CCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHH
Confidence 37899999998763 55 467888888776543222211 1223446777777777654 7899999999999988
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEE
Q 012368 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV 250 (465)
Q Consensus 171 al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~v 250 (465)
+++++.. . ++++.|++.+|+|..+...+...+..... .+...+..+. .|+++. .+. +...++
T Consensus 99 ~~~~~~~-~--------~~gd~vlv~~P~y~~~~~~~~~~g~~v~~----v~~~~~~~~~--~d~~~~--~~~-~~k~v~ 160 (374)
T PRK05839 99 FPQFVLF-D--------KQNPTIAYPNPFYQIYEGAAIASRAKVLL----MPLTKENDFT--PSLNEK--ELQ-EVDLVI 160 (374)
T ss_pred HHHHHhc-C--------CCCCEEEECCCCchhhHHHHHhcCCEEEE----eecccccCCc--CCcchh--hhc-cccEEE
Confidence 8776541 0 14788999999998887655443322111 1111111110 022222 232 234556
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccc-c--------ccCCcccEEEecccCC-Cc
Q 012368 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAH-E--------HYGIFPDIMTLAKPLA-GG 320 (465)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~-~--------~~~~~pdi~t~sK~lg-~G 320 (465)
+++|+||+|. ..+.+.+++|.++|++||++||+||+|..|...+..... . .++...-+.+|||.++ .|
T Consensus 161 i~nP~NPTG~--~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G 238 (374)
T PRK05839 161 LNSPNNPTGR--TLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPG 238 (374)
T ss_pred EeCCCCCcCc--ccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCcc
Confidence 6677777763 458899999999999999999999999987322221111 1 1122233447999987 59
Q ss_pred cceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccce
Q 012368 321 LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGL 400 (465)
Q Consensus 321 ~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~ 400 (465)
+|+||+++++++++.+........++.+.+.+.++.+++. ++++.+++++.....++.+.+.+ +.. .+..|.
T Consensus 239 lRiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l---~~~--~p~gg~ 310 (374)
T PRK05839 239 LRSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWL---DDEHAEFFRNIYAKNLKLAREIL---GIT--IPPATF 310 (374)
T ss_pred ceeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhc---cchHHHHHHHHHHHHHHHHHHhc---CCC--CCCeeE
Confidence 9999999999998887543333345667778888777664 34455555544444444444433 221 345588
Q ss_pred EEEEEecCChHHHHHHHHH-CCceEeecCC-------CCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 401 IIGIEFDVSATPVVDACRD-SGLLVLTAGK-------GNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 401 ~~~i~~~~~~~~~~~~l~~-~Gv~v~~~~~-------~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
|+|+.++ +..++++.|++ +||.+.|+.. .+++|++++ .+++++.+++++|.++++
T Consensus 311 fi~~~~~-~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~--~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 311 YVWLPVD-NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALV--YDTPKLEKALEIIKTYLE 373 (374)
T ss_pred EEEEeCC-ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHhh
Confidence 8888874 45778889875 9999998521 378999764 479999999999998874
No 166
>PRK07337 aminotransferase; Validated
Probab=99.95 E-value=1.4e-25 Score=225.01 Aligned_cols=333 Identities=14% Similarity=0.113 Sum_probs=216.7
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhccccc--CCCCCHHHHHHHHHHHhhcC----CCeEEecCCHHHHHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS--NMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEANEAA 171 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~la~~l~~~~~----~~~v~~~~sG~eA~~~a 171 (465)
..++||..+... ++ .+|.+.+++.+.+......+ ..+..+.++.+++++.+.++ +++|++|+|+++|+..+
T Consensus 30 ~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~ 106 (388)
T PRK07337 30 RDIIHMGIGEPD--FT-APEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLA 106 (388)
T ss_pred CCEEEeCCcCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHH
Confidence 346777776543 33 46889999988775421111 11222345666666655444 67899999999999988
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEE
Q 012368 172 IKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVF 251 (465)
Q Consensus 172 l~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi 251 (465)
+.... .+++.|++.+|+|.++...+...+..... .+......+ .-|++++++.+.++...+++
T Consensus 107 ~~~l~-----------~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~----~~~~~~~~~--~~~~~~l~~~~~~~~~~v~l 169 (388)
T PRK07337 107 CLALV-----------ERGDEVLMPDPSYPCNRHFVAAAEGRPVL----VPSGPAERF--QLTAADVEAAWGERTRGVLL 169 (388)
T ss_pred HHHhc-----------CCCCEEEEeCCCchhhHHHHHHcCCEEEE----eecCCccCC--cCCHHHHHhhcCccceEEEE
Confidence 88654 16899999999998775444333322111 111111100 02789999999765666777
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccE---EEecccCC-CccceeeEE
Q 012368 252 VEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDI---MTLAKPLA-GGLPIGAAL 327 (465)
Q Consensus 252 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi---~t~sK~lg-~G~~iG~v~ 327 (465)
+.|.|++| ...+.+.+++|.++|++|++++|+||+|.++...+..... ....+++ .+|||.++ .|+|+||++
T Consensus 170 ~~p~NPtG--~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~--~~~~~~vi~~~S~SK~~~~~G~RiG~~~ 245 (388)
T PRK07337 170 ASPSNPTG--TSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSA--LSLGDDVITINSFSKYFNMTGWRLGWLV 245 (388)
T ss_pred ECCCCCCC--cCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcCh--hhccCCEEEEEechhhcCCchhheeeee
Confidence 77877665 4458899999999999999999999999987554431111 1122333 37899997 599999999
Q ss_pred eCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCce-eeeccceEEEEEe
Q 012368 328 VTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVK-DVRGLGLIIGIEF 406 (465)
Q Consensus 328 ~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~g~~~~i~~ 406 (465)
+++++++.+.........+.+++++.++.++++... .+.+++.++..+..++.+.+.+..++... ..+..|.++|+++
T Consensus 246 ~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~f~~~~~ 324 (388)
T PRK07337 246 VPEALVGTFEKLAQNLFICASALAQHAALACFEPDT-LAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFYVYADC 324 (388)
T ss_pred cCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCc-hHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCeeEEEEEec
Confidence 999998887643333345678888888887775211 12223333333333444444444444322 2344578899988
Q ss_pred c-------CChHHHHHHHH-HCCceEeecCC------CCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 407 D-------VSATPVVDACR-DSGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 407 ~-------~~~~~~~~~l~-~~Gv~v~~~~~------~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
+ .+..+++..|+ ++||.+.|+.. .+++|++++. +++++++++++|.+++
T Consensus 325 ~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~--~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 325 RGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT--SMSRLEEAVARLGKLF 387 (388)
T ss_pred ccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC--CHHHHHHHHHHHHHHh
Confidence 4 24667887755 68999987521 3689998764 6899999999998765
No 167
>PRK07550 hypothetical protein; Provisional
Probab=99.95 E-value=1.1e-25 Score=225.60 Aligned_cols=336 Identities=16% Similarity=0.133 Sum_probs=219.0
Q ss_pred CCCEEEecccCcccccCCCCCHHHHHHHHHHHhhccc--c-cCCCCCHHHHHHHHHHHhhcC----CCeEEecCCHHHHH
Q 012368 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTH--V-SNMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEAN 168 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~--~-~~~~~~~~~~~la~~l~~~~~----~~~v~~~~sG~eA~ 168 (465)
.|..++||.++... +. .++.+.+++.+.+..... + ...+..+.++++++++.+..+ .++|++|+|+++|+
T Consensus 27 ~~~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 103 (386)
T PRK07550 27 ADGPLIDLSQAVPG--YP-PPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAF 103 (386)
T ss_pred cCCCeEEeCCCCCC--CC-CCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHH
Confidence 35567899988753 22 467788888877643111 1 111223336677777766544 68999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeE
Q 012368 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA 248 (465)
Q Consensus 169 ~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a 248 (465)
..+++++.. ++++|++.+|+|.++...+...+..... .+...+.... .|+++++++++.+..+
T Consensus 104 ~~~~~~l~~-----------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~----v~~~~~~~~~--~~~~~l~~~~~~~~~~ 166 (386)
T PRK07550 104 WAAMVTLAG-----------AGDEVILPLPWYFNHKMWLDMLGIRPVY----LPCDEGPGLL--PDPAAAEALITPRTRA 166 (386)
T ss_pred HHHHHHhcC-----------CCCEEEEcCCCCcchHHHHHhcCCEEEE----EecCCCcCCC--CCHHHHHHHhcccCcE
Confidence 988887642 6899999999997775433322211110 1111111000 2788999999865556
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc-cc-cccc---cCCcccEEEecccCC-Cccc
Q 012368 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LW-AHEH---YGIFPDIMTLAKPLA-GGLP 322 (465)
Q Consensus 249 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~-~~-~~~~---~~~~pdi~t~sK~lg-~G~~ 322 (465)
++++.|.|++| . .++.+.+++|.++|++||+++|+||+|.+|...+. .. .... ......+.+|||.++ .|+|
T Consensus 167 v~~~~P~NPtG-~-~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R 244 (386)
T PRK07550 167 IALVTPNNPTG-V-VYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHR 244 (386)
T ss_pred EEEeCCCCCCC-c-ccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccc
Confidence 67778876554 3 45889999999999999999999999988732221 11 1111 112233558999998 6999
Q ss_pred eeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEE
Q 012368 323 IGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLII 402 (465)
Q Consensus 323 iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~ 402 (465)
+||+++++++++.+.......+.+.+.+++.++..+|+.+ +++.++.++..+..++.+.+.+..++.+...+..|.++
T Consensus 245 iG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~~~~ 322 (386)
T PRK07550 245 VGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPNL--ADWRAGNRAEIARRRDAFRAVFARLPGWELLASGAYFA 322 (386)
T ss_pred eEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHHHHHHhCCCceeCCCceEEE
Confidence 9999999998887765444455667888888888877632 33444444433344444444444443222223446677
Q ss_pred EEEec---CChHHHHHHHH-HCCceEeecC-----CCCEEEEecCCCCcHHHHHHHHHHHHHH
Q 012368 403 GIEFD---VSATPVVDACR-DSGLLVLTAG-----KGNVVRLVPPLIISEQELDQAVEILCKT 456 (465)
Q Consensus 403 ~i~~~---~~~~~~~~~l~-~~Gv~v~~~~-----~~~~lRi~~~~~~t~e~i~~~l~~l~~~ 456 (465)
|+.++ .+..+++..|+ ++||.+.|+. .++++||+++. .+++++++++++|.++
T Consensus 323 ~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 323 YVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFAN-ADVAGIGELVERLRAF 384 (386)
T ss_pred EecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeec-CCHHHHHHHHHHHHhh
Confidence 77763 35778998876 5799998853 13689998864 4689999999999764
No 168
>PRK07683 aminotransferase A; Validated
Probab=99.95 E-value=2.8e-25 Score=222.47 Aligned_cols=334 Identities=16% Similarity=0.061 Sum_probs=215.0
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhcccc--cCCCCCHHHHHHHHHHHhhcC----CC-eEEecCCHHHHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHV--SNMYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEANEA 170 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~--~~~~~~~~~~~la~~l~~~~~----~~-~v~~~~sG~eA~~~ 170 (465)
..++|+..+.+. ++ .++.+.+++.+.+...... ...+....++++++++.+.++ .+ +|++|+|+++|+..
T Consensus 28 ~~~i~l~~~~p~--~~-~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~ 104 (387)
T PRK07683 28 DNLISLTIGQPD--FP-TPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDI 104 (387)
T ss_pred CCeEEecCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 456888877542 33 4678899999887652211 112223345666666654433 55 89999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCC-CCceEeeCCCHHHHHhhcCCCCeEE
Q 012368 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVM-PGVNFVEYGNIEATRKLIQPGKTAA 249 (465)
Q Consensus 171 al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~le~~l~~~~~a~ 249 (465)
+++.+.. +++.|++.+|+|+++.......+....+. +.. .+.. -|.+++++.+.++...+
T Consensus 105 ~~~~l~~-----------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~----~~~~~~~~----~~~~~l~~~~~~~~~~i 165 (387)
T PRK07683 105 AFRTILE-----------PGTEVILPAPIYPGYEPIIRLCGAKPVFI----DTRSTGFR----LTAEALENAITEKTRCV 165 (387)
T ss_pred HHHHhCC-----------CCCEEEEcCCCccchHHHHHHcCCEEEEe----ecCcccCC----CCHHHHHHhcCcCceEE
Confidence 8886541 58899999999988765554433221111 111 1111 16788999887544455
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccc-ccccC---CcccEEEecccCC-Ccccee
Q 012368 250 VFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA-HEHYG---IFPDIMTLAKPLA-GGLPIG 324 (465)
Q Consensus 250 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~-~~~~~---~~pdi~t~sK~lg-~G~~iG 324 (465)
++++|+|++| ..++.+.+++|.++|+++|+++|+||+|..+...+.... ....+ ...-+.+|||.++ .|+|+|
T Consensus 166 ~i~~p~NPtG--~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG 243 (387)
T PRK07683 166 VLPYPSNPTG--VTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIG 243 (387)
T ss_pred EEeCCCCCCC--cCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeE
Confidence 5666666655 345889999999999999999999999998743332111 11112 1223447999999 799999
Q ss_pred eEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEE
Q 012368 325 AALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGI 404 (465)
Q Consensus 325 ~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i 404 (465)
|+++++++++.+.........+.+.+++.++.+.|+.. +.+.+++++..+..++.+.+.+.+.+.....+..|.++|+
T Consensus 244 ~i~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 321 (387)
T PRK07683 244 FLFAPSYLAKHILKVHQYNVTCASSISQYAALEALTAG--KDDAKMMRHQYKKRRDYVYNRLISMGLDVEKPTGAFYLFP 321 (387)
T ss_pred EEEcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCeeEEEEE
Confidence 99999999888764322223445678888888888632 2334444444444444444444444322222333556666
Q ss_pred Eec---CChHHHHHHH-HHCCceEeecCC-----CCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 405 EFD---VSATPVVDAC-RDSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 405 ~~~---~~~~~~~~~l-~~~Gv~v~~~~~-----~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
.+. .+..+++..| .++||.+.|+.. ++++||++. .+++++.+++++|.+++.+
T Consensus 322 ~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~--~~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 322 SIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYA--YSIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred ecccCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 553 2455677664 578999988631 368999765 4799999999999998864
No 169
>PRK09082 methionine aminotransferase; Validated
Probab=99.95 E-value=2.2e-25 Score=223.13 Aligned_cols=330 Identities=15% Similarity=0.126 Sum_probs=215.3
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHhhcccc--cCCCCCHHHHHHHHHHHhhcC----C-CeEEecCCHHHHHHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHV--SNMYYSIPQIELAKRLVACSF----A-DRVFFSNTGTEANEAA 171 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~--~~~~~~~~~~~la~~l~~~~~----~-~~v~~~~sG~eA~~~a 171 (465)
.++||..|... ++ .+|.+.+++.+.++..... ...+..+.++++++++.+.++ . ++|++|+|+++|+..+
T Consensus 31 ~~i~l~~g~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~ 107 (386)
T PRK09082 31 GAINLSQGFPD--FD-GPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAA 107 (386)
T ss_pred CEEEecCCCCC--CC-CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHH
Confidence 46888887553 33 4788999998877643221 112233447778888877665 2 3799999999999999
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEE
Q 012368 172 IKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVF 251 (465)
Q Consensus 172 l~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi 251 (465)
++... .+++.|++.+|+|.++.......+.... . .+..... + ..|++++++.++++..++++
T Consensus 108 ~~~~~-----------~~gd~Vli~~p~y~~~~~~~~~~g~~~~-~---~~~~~~~-~--~~d~~~l~~~~~~~~~~v~l 169 (386)
T PRK09082 108 ILALV-----------RPGDEVIVFDPSYDSYAPAIELAGGRAV-R---VALQPPD-F--RVDWQRFAAAISPRTRLIIL 169 (386)
T ss_pred HHHHc-----------CCCCEEEEeCCCchhhHHHHHHcCCEEE-E---EecCccc-c--cCCHHHHHHhcCccceEEEE
Confidence 88664 2689999999999877644433322111 1 1111100 0 02789999999754344455
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc--ccccccCC---cccEEEecccCC-Cccceee
Q 012368 252 VEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL--WAHEHYGI---FPDIMTLAKPLA-GGLPIGA 325 (465)
Q Consensus 252 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~--~~~~~~~~---~pdi~t~sK~lg-~G~~iG~ 325 (465)
+.|.|++| . .++.+.+++|.++|++||+++|+||+|.++...+.. ......+. ..-+.+|||.+| .|+|+||
T Consensus 170 ~~p~NPtG-~-~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~ 247 (386)
T PRK09082 170 NTPHNPSG-T-VWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGY 247 (386)
T ss_pred eCCCCCCC-c-CCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhh
Confidence 55655544 3 457889999999999999999999999876433321 11112222 223347999997 5999999
Q ss_pred EEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEE
Q 012368 326 ALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIE 405 (465)
Q Consensus 326 v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~ 405 (465)
+++++++++.+........++.+.+++.++.+.++. .+.+.+++++..+..++.+.+.+.+.+........|.++|+.
T Consensus 248 iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~g~~~~~~~ 325 (386)
T PRK09082 248 CVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRA--EPEHYLELPAFYQAKRDRFRAALANSRFKLLPCEGTYFQLVD 325 (386)
T ss_pred hhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCeeEEEEEe
Confidence 999999998886544445677888888887777752 344444454444444444444444443221222335567777
Q ss_pred ec----CChHHHHHHHH-HCCceEeecC-----C--CCEEEEecCCCCcHHHHHHHHHHHHH
Q 012368 406 FD----VSATPVVDACR-DSGLLVLTAG-----K--GNVVRLVPPLIISEQELDQAVEILCK 455 (465)
Q Consensus 406 ~~----~~~~~~~~~l~-~~Gv~v~~~~-----~--~~~lRi~~~~~~t~e~i~~~l~~l~~ 455 (465)
++ .+..++++.|+ ++||.+.|+. . .+++|++++ .+++++++++++|.+
T Consensus 326 ~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~--~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 326 YSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFA--KQEETLDAAAERLCQ 385 (386)
T ss_pred ccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEec--CCHHHHHHHHHHHhh
Confidence 63 24678888874 7799998863 1 257999765 478999999998864
No 170
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=2.3e-25 Score=221.86 Aligned_cols=323 Identities=21% Similarity=0.203 Sum_probs=215.2
Q ss_pred CCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHH
Q 012368 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKF 174 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~ 174 (465)
+..++||..|.. ++| .+|.+.+++.+...... .|++..-.+|++.++++++ .++|++|+|+++++..++++
T Consensus 35 ~~~~i~l~~~~~--~~~-~~~~~~~al~~~~~~~~----~Y~~~~g~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~ 107 (371)
T PRK05166 35 VPRIAKLGSNEN--PLG-PSPAVRRAFADIAELLR----LYPDPQGRALREAIAARTGVPADRIILGNGSEDLIAVICRA 107 (371)
T ss_pred CcceEEcCCCCC--CCC-CCHHHHHHHHHHHHHhh----cCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHH
Confidence 446899998754 466 67889999887544322 2333222478888888876 67899999999999988876
Q ss_pred HHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcc
Q 012368 175 ARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEP 254 (465)
Q Consensus 175 a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep 254 (465)
+.. +++.|++.+|+|+++...+...+.... . .+...+.. -|++++++.++++...+++++|
T Consensus 108 ~~~-----------~gd~vli~~P~y~~~~~~~~~~g~~~~-~---v~~~~~~~----~~~~~l~~~~~~~~~~v~l~~p 168 (371)
T PRK05166 108 VLR-----------PGDRVVTLYPSFPLHEDYPTMMGARVE-R---VTVTPDLG----FDLDALCAAVARAPRMLMFSNP 168 (371)
T ss_pred hcC-----------CCCEEEEcCCChHHHHHHHHHcCCeEE-E---eecCCCCC----CCHHHHHHhhhcCCCEEEEeCC
Confidence 541 688999999999876543322221111 0 11111111 2789999988754444556677
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-cccccc-C---CcccEEEecccCC-CccceeeEEe
Q 012368 255 IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAHEHY-G---IFPDIMTLAKPLA-GGLPIGAALV 328 (465)
Q Consensus 255 ~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~-~~~~~~-~---~~pdi~t~sK~lg-~G~~iG~v~~ 328 (465)
.|++| ..++.+.+++|.++|++ ++++|+||+|..|...+.. ...... . ...-+.+|||.++ .|+|+||+++
T Consensus 169 ~NPtG--~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~ 245 (371)
T PRK05166 169 SNPVG--SWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLV 245 (371)
T ss_pred CCCCC--CCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeec
Confidence 66654 34588889999999875 8999999999887422211 111111 1 1223447999999 7999999775
Q ss_pred -CHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEec
Q 012368 329 -TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFD 407 (465)
Q Consensus 329 -~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~ 407 (465)
++++++.+... ...++.+.+++.++.++|. ..++.++..+.....++.+.+.+..++. ...++.|+|+|+.++
T Consensus 246 ~~~~l~~~~~~~--~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~p~~g~fl~~~~~ 319 (371)
T PRK05166 246 SDPELVGLLDRV--RTPFNVNGAAQAAALAALD---DEEHLAKGVALALAERERLKKELAEMGY-RIAPSRANFLFFDAR 319 (371)
T ss_pred CCHHHHHHHHHh--ccCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCcC-eeCCCcCCEEEEeCC
Confidence 68888777532 2356778888888888775 3344444444444444455555555543 334566889988875
Q ss_pred CChHHHHHHHHHCCceEeecCC---CCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 408 VSATPVVDACRDSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 408 ~~~~~~~~~l~~~Gv~v~~~~~---~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
.+..++.+.|.++||.+.++.. .+++||++. +.++.+++++.|+.++
T Consensus 320 ~~~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~---~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 320 RPASAVAEALLRQGVIVKPWKQPGFETFIRVSIG---SPEENDHFVAALDKVL 369 (371)
T ss_pred CCHHHHHHHHHHCCeEEecCCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 5678899999999999988632 468999755 5677888888887654
No 171
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.95 E-value=5.2e-25 Score=220.79 Aligned_cols=335 Identities=16% Similarity=0.084 Sum_probs=215.8
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhccc-c-cCCCCCHHHHHHHHHHHhhcC-----CCeEEecCCHHHHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTH-V-SNMYYSIPQIELAKRLVACSF-----ADRVFFSNTGTEANEA 170 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~-~-~~~~~~~~~~~la~~l~~~~~-----~~~v~~~~sG~eA~~~ 170 (465)
+.+|||..+... ++ .++.+.+++.+.+..... + ...+..+.++.+++++.+.++ .++|++|+|+++|+.+
T Consensus 30 ~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~ 106 (391)
T PRK07309 30 PGILKLTLGEPD--FT-TPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSA 106 (391)
T ss_pred CCeEEcCCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 458999988763 55 367788898887754211 1 111122335566666654444 3689999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCC--CCeE
Q 012368 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP--GKTA 248 (465)
Q Consensus 171 al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--~~~a 248 (465)
+++.+. .+++.|++.+|+|.++.......+..... .+.... .+. .|+++++++++. .+++
T Consensus 107 ~~~~~~-----------~~gd~vl~~~p~y~~~~~~~~~~g~~~~~----~~~~~~-~~~--~d~~~l~~~~~~~~~~~~ 168 (391)
T PRK07309 107 SLTAIL-----------EPGDKVLLPAPAYPGYEPIVNLVGAEIVE----IDTTEN-DFV--LTPEMLEKAILEQGDKLK 168 (391)
T ss_pred HHHHhc-----------CCCCEEEEeCCCCcchHHHHHHcCCEEEE----EecCCc-CCc--CCHHHHHHHhhccCCCeE
Confidence 888654 16889999999999876544333322111 111110 000 278999998863 2455
Q ss_pred EEEEc-ccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-ccccc--cCCcccEEEecccCC-Cccce
Q 012368 249 AVFVE-PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAHEH--YGIFPDIMTLAKPLA-GGLPI 323 (465)
Q Consensus 249 ~vi~e-p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~-~~~~~--~~~~pdi~t~sK~lg-~G~~i 323 (465)
++++. |.|++| ...+.+.+++|.++|++||+++|+||+|.+|...+.. ..... .+...-+.+|||.++ .|+|+
T Consensus 169 ~i~l~~P~NPtG--~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRv 246 (391)
T PRK07309 169 AVILNYPANPTG--VTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRI 246 (391)
T ss_pred EEEEECCCCCCC--cCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCcccee
Confidence 55554 665554 4458889999999999999999999999987443421 11111 122223447999998 69999
Q ss_pred eeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceE
Q 012368 324 GAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN--PAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLI 401 (465)
Q Consensus 324 G~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~ 401 (465)
||+++++++++.+.........+.+++++.++..+|+.... ....++++++.+.+.+.| ..++.....+..|.+
T Consensus 247 G~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~p~gg~~ 322 (391)
T PRK07309 247 GLIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKM----TDLGFKIIKPDGAFY 322 (391)
T ss_pred EEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHH----HHCCCeecCCCeeEE
Confidence 99999999988886433333456788889888888864211 122334444444444444 444422122333556
Q ss_pred EEEEecC----ChHHHHHHHH-HCCceEeecC---C--CCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 402 IGIEFDV----SATPVVDACR-DSGLLVLTAG---K--GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 402 ~~i~~~~----~~~~~~~~l~-~~Gv~v~~~~---~--~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
+|+.++. +..++++.++ ++||.+.|+. . ++++|++++ .+.+++++++++|.+++++++
T Consensus 323 ~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~i~~l~~~~~~~~ 390 (391)
T PRK07309 323 IFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA--ASMETIKEAMKRLKEYMEEHA 390 (391)
T ss_pred EEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHhhc
Confidence 6777631 3567887654 7899998763 1 468999766 368899999999999987654
No 172
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.95 E-value=5.1e-26 Score=215.06 Aligned_cols=320 Identities=18% Similarity=0.134 Sum_probs=216.0
Q ss_pred CCHHHHHHHHHHHhhc-c--cccCCCCCHHHHHHHHHHHhhcC-----CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCC
Q 012368 115 GDADWIKAVVDQANVL-T--HVSNMYYSIPQIELAKRLVACSF-----ADRVFFSNTGTEANEAAIKFARKFQRHSNPDS 186 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~-~--~~~~~~~~~~~~~la~~l~~~~~-----~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~ 186 (465)
.|..|.+++.+.+... . ++.+++.......|++++++.++ .++|++|+|+.+|+..++....
T Consensus 45 ~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~---------- 114 (420)
T KOG0257|consen 45 PPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLL---------- 114 (420)
T ss_pred CcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHc----------
Confidence 3445778888877653 1 22333445558889999988665 6689999999999999988776
Q ss_pred CCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEee-CCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCC
Q 012368 187 KEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVE-YGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSAT 265 (465)
Q Consensus 187 ~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~ 265 (465)
+++|.||+++|.|..+...+...++.+.+...- +....+..-. ..|.+.+|.++.+++.++|+++|.|++| -+.+
T Consensus 115 -~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~-~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtG--kvfs 190 (420)
T KOG0257|consen 115 -NPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLK-PKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTG--KVFS 190 (420)
T ss_pred -CCCCEEEEecCcchhhhhHHhhcCCcceeeccc-cccccccCccccCChHHHHhhccCCccEEEEeCCCCCcC--cccC
Confidence 379999999999999998888888776654221 1111111001 1389999999998777888888888887 4569
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCCCCCc---ccccc--ccCCcccEEEecccCCC-ccceeeEEeCHHHHhhccCC
Q 012368 266 KEFLQFLRDACDDAGALLVFDEVQCGLGRTGY---LWAHE--HYGIFPDIMTLAKPLAG-GLPIGAALVTEKVASAINYG 339 (465)
Q Consensus 266 ~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~---~~~~~--~~~~~pdi~t~sK~lg~-G~~iG~v~~~~~i~~~~~~~ 339 (465)
++.|++|+++|++||+++|+||||.-+-..|. .++.. .+.....+.++||++|. |||+||+++++.++....+.
T Consensus 191 ReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~v 270 (420)
T KOG0257|consen 191 REELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFPV 270 (420)
T ss_pred HHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHhhhhHHHH
Confidence 99999999999999999999999987656663 22222 12334455578999996 99999999999998888766
Q ss_pred CCcCCCCChHHHHHHHHHHHHHhc---Cc-------hHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEec--
Q 012368 340 DHGSTFAGSPLVCNAAIAVLDKIS---NP-------AFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFD-- 407 (465)
Q Consensus 340 ~~~~t~~~~~~~~~aa~a~L~~~~---~~-------~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~-- 407 (465)
.....+..+...+.|..+++..-. ++ ++...++++++.+.+.|.++ +.....+..+.|++.+++
T Consensus 271 h~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l----g~~v~~p~gayyl~adfs~~ 346 (420)
T KOG0257|consen 271 HQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL----GLKVTGPEGAYYLWADFSLA 346 (420)
T ss_pred hhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc----CCccccCCCceEEEEecccc
Confidence 556666666677777666665322 11 24445556666666665554 322233333556666763
Q ss_pred --C----------ChHHHHHHHH-HCCceEeecCC----------CCEEEEecCCCCcHHHHHHHHHHHH
Q 012368 408 --V----------SATPVVDACR-DSGLLVLTAGK----------GNVVRLVPPLIISEQELDQAVEILC 454 (465)
Q Consensus 408 --~----------~~~~~~~~l~-~~Gv~v~~~~~----------~~~lRi~~~~~~t~e~i~~~l~~l~ 454 (465)
. +.-.++.+|. +.|+.+.|... ++.+|+ .+.-+++.++.++++|+
T Consensus 347 ~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~--~~~k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 347 KSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRF--CFCKADETLRKAIERLK 414 (420)
T ss_pred ccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHH--HHHhhHHHHHHHHHHHh
Confidence 0 1223566666 45777666421 123444 34556666777777666
No 173
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=5.3e-25 Score=217.59 Aligned_cols=318 Identities=15% Similarity=0.134 Sum_probs=207.7
Q ss_pred EEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHHH
Q 012368 100 YLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARK 177 (465)
Q Consensus 100 ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~~ 177 (465)
.+|+..|.. .++ .+|.+++++.+.+.... ...|+.+...++++.++++++ +++|++|+|+++++..+++...
T Consensus 24 ~~~l~~~~~--~~~-~p~~~~~a~~~~~~~~~--~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~- 97 (351)
T PRK14807 24 KYKMDANET--PFE-LPEEVIKNIQEIVKSSQ--VNIYPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFI- 97 (351)
T ss_pred eeEccCCCC--CCC-CCHHHHHHHHHHhhcCc--ccCCCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhc-
Confidence 467776654 455 67889999988775321 123344446788888998887 6799999999999999888654
Q ss_pred HhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeE-EEEEcccC
Q 012368 178 FQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA-AVFVEPIQ 256 (465)
Q Consensus 178 ~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a-~vi~ep~~ 256 (465)
.++++|++.+|+|.++...+...+.... . .+...+.. -|+++++++++..+++ +++++|.|
T Consensus 98 ----------~~gd~Vlv~~p~y~~~~~~~~~~g~~~~-~---v~~~~~~~----~d~~~l~~~~~~~~~k~v~l~~p~N 159 (351)
T PRK14807 98 ----------NKGDVVIYPHPSFAMYSVYSKIAGAVEI-P---VKLKEDYT----YDVGSFIKVIEKYQPKLVFLCNPNN 159 (351)
T ss_pred ----------CCCCEEEEeCCChHHHHHHHHHcCCeEE-E---eecCCCCC----CCHHHHHHHhhccCCCEEEEeCCCC
Confidence 2689999999999876543333322111 1 11111111 2789999998743444 45555555
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccc-cccccCCcccEEEecccCC-CccceeeEEeCHHHHh
Q 012368 257 GEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEHYGIFPDIMTLAKPLA-GGLPIGAALVTEKVAS 334 (465)
Q Consensus 257 ~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~-~~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~i~~ 334 (465)
++| ... + .+++.++|++++.++|+||+|.+|. ..... .....+...-+-+|||.++ .|+|+||+++++++++
T Consensus 160 PtG-~~~-~---~~~l~~l~~~~~~~~ivDe~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~ 233 (351)
T PRK14807 160 PTG-SVI-E---REDIIKIIEKSRGIVVVDEAYFEFY-GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENILK 233 (351)
T ss_pred CCC-CCC-C---HHHHHHHHHhCCCEEEEeCcchhhc-ccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHHHHH
Confidence 554 443 4 4566667777788999999998772 21111 1122222333447999998 7999999999999998
Q ss_pred hccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCChHHHH
Q 012368 335 AINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSATPVV 414 (465)
Q Consensus 335 ~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~ 414 (465)
.+.... ..++.+++++.++.++|+...-++..++++++.+.+.+.| .+.+.+...++.|.++|+.+. +..++.
T Consensus 234 ~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l----~~~~g~~~~~~~~~~~~i~~~-~~~~~~ 306 (351)
T PRK14807 234 YLNLVK--SPYNINSLSQVIALKVLRTGVLKERVNYILNERERLIKEL----SKIPGIKVYPSKTNFILVKFK-DADYVY 306 (351)
T ss_pred HHHHcc--CCCCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH----HhCCCcEECcCCccEEEEEcC-CHHHHH
Confidence 886432 2456788899998888863211223333444444444443 344434444566888888874 467788
Q ss_pred HHHHHCCceEeecCC----CCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 415 DACRDSGLLVLTAGK----GNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 415 ~~l~~~Gv~v~~~~~----~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
+.|+++||.+.+... .+++||++. +.++.+.+++.|++++
T Consensus 307 ~~l~~~gV~v~~~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 307 QGLLERGILVRDFSKVEGLEGALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred HHHHHCCEEEEECCCCCCCCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 999999999977531 367999754 5778889999887754
No 174
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=2.6e-25 Score=218.09 Aligned_cols=319 Identities=19% Similarity=0.164 Sum_probs=210.1
Q ss_pred eeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC-----CCeEEe
Q 012368 86 SGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-----ADRVFF 160 (465)
Q Consensus 86 ~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-----~~~v~~ 160 (465)
++.|.+-+...|+..+|+..|.. +++ .+|.+++++.+.+..... ..|+.....+|++.++++++ .++|++
T Consensus 7 ~~~~~~~~~~~~~~~i~l~~~~~--~~~-~p~~~~~~~~~~~~~~~~--~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~i 81 (335)
T PRK14808 7 IAKRAYPYETEKRDRTYLALNEN--PFP-FPEDLVDEVFRRLNSDTL--RIYYDSPDEELIEKILSYLDTDFLSKNNVSV 81 (335)
T ss_pred hhccCcCCCCCCCceeEecCCCC--CCC-CCHHHHHHHHHHhhhhhh--hcCCCCChHHHHHHHHHHhCCCCCCcceEEE
Confidence 45666666678889999988754 566 678899999887653211 22333345566677776654 789999
Q ss_pred cCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHh
Q 012368 161 SNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRK 240 (465)
Q Consensus 161 ~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 240 (465)
|+|++|++..+++.. +.|++.+|+|.++...+...+...... +...+. .++..
T Consensus 82 t~Ga~~~i~~~~~~~---------------d~v~v~~P~y~~~~~~~~~~g~~~~~v----~~~~~~------~~~~~-- 134 (335)
T PRK14808 82 GNGADEIIYVMMLMF---------------DRSVFFPPTYSCYRIFAKAVGAKFLEV----PLTKDL------RIPEV-- 134 (335)
T ss_pred cCCHHHHHHHHHHHh---------------CcEEECCCCHHHHHHHHHHcCCeEEEe----cCCCcC------CCChh--
Confidence 999999999988743 259999999998876665544322111 111111 11111
Q ss_pred hcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccc-ccccCCcccEEEecccCC-
Q 012368 241 LIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA-HEHYGIFPDIMTLAKPLA- 318 (465)
Q Consensus 241 ~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~-~~~~~~~pdi~t~sK~lg- 318 (465)
.+. .....++++|+||+|.+ .+.+.+++|. +++++||+||+|..|. ...... ...+....-+.+|||.++
T Consensus 135 ~~~-~~~~i~i~nP~NPTG~~--~s~~~l~~l~----~~~~~ii~DE~Y~~f~-~~~~~~~~~~~~~vi~~~S~SK~~~l 206 (335)
T PRK14808 135 NVG-EGDVVFIPNPNNPTGHV--FEREEIERIL----KTGAFVALDEAYYEFH-GESYVDLLKKYENLAVIRTFSKAFSL 206 (335)
T ss_pred Hcc-CCCEEEEeCCCCCCCCC--cCHHHHHHHH----hcCCEEEEECchhhhc-CCchHHHHHhCCCEEEEEechhhccC
Confidence 122 24566777788777643 4666666554 5899999999999883 111111 122222334558999999
Q ss_pred CccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeecc
Q 012368 319 GGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGL 398 (465)
Q Consensus 319 ~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 398 (465)
.|+|+||+++++++++.+.... .+++.+.+++.++.++++.. +..++..+.....++.+.+.+...+ +...++.
T Consensus 207 ~GlRvG~~v~~~~~~~~l~~~~--~~~~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~ 280 (335)
T PRK14808 207 AAQRIGYVVSSEKFIDAYNRVR--LPFNVSYVSQMFAKVALDHR---EIFEERTKFIVEERERMKSALREMG-YRITDSR 280 (335)
T ss_pred cccceEEEEeCHHHHHHHHHhc--CCCCCCHHHHHHHHHHHhCH---HHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCC
Confidence 6999999999999999886433 34677888898888888632 2222222222222344444444444 3344568
Q ss_pred ceEEEEEec-CChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHH
Q 012368 399 GLIIGIEFD-VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCK 455 (465)
Q Consensus 399 g~~~~i~~~-~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~ 455 (465)
|.|+|+.++ .+..++.+.|.++||++.... +.+|++ ..+.++.+++++.|++
T Consensus 281 g~f~~~~l~~~~~~~~~~~l~~~Gi~V~~~~--~~~Ris---i~~~~~~~~~~~~l~~ 333 (335)
T PRK14808 281 GNFVFIFMEKEEKERLLEHLRAKNIAVRSFR--EGVRIT---IGKREENDMILKELEV 333 (335)
T ss_pred CeEEEEeCCCccHHHHHHHHHHCCeEEEECC--CCeEEe---cCCHHHHHHHHHHHHh
Confidence 999998884 345788999999999998753 579997 4467899999988875
No 175
>PRK08175 aminotransferase; Validated
Probab=99.94 E-value=6.6e-25 Score=220.44 Aligned_cols=334 Identities=13% Similarity=0.122 Sum_probs=216.2
Q ss_pred CCEEEecccCcccccCCCCCHHHHHHHHHHHhhcc---cccCCCCCHHHHHHHHHHHhhcC----CC-eEEecCCHHHHH
Q 012368 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLT---HVSNMYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEAN 168 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~~----~~-~v~~~~sG~eA~ 168 (465)
|.+++||..+.+ .+..+|.+.+++.+.+.... +....+..+.++++++++.+.++ .+ ++++|+|+++++
T Consensus 28 ~~~~i~l~~g~p---~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l 104 (395)
T PRK08175 28 GEDIIDFSMGNP---DGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGL 104 (395)
T ss_pred CCCeEEcCCCCC---CCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence 456788887643 33456778888877664321 11111223346666666665544 45 799999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCC--CC
Q 012368 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP--GK 246 (465)
Q Consensus 169 ~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--~~ 246 (465)
..+++.+. .++++|++.+|+|..+...+...+..... .+...+. .+.++++++++. .+
T Consensus 105 ~~~~~~~~-----------~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~----v~~~~~~-----~~~~~l~~~l~~~~~~ 164 (395)
T PRK08175 105 AHLMLATL-----------DHGDTVLVPNPSYPIHIYGAVIAGAQVRS----VPLVEGV-----DFFNELERAIRESYPK 164 (395)
T ss_pred HHHHHHhC-----------CCCCEEEEcCCCCcchHHHHHHcCCeEEE----EecccCC-----CcHHHHHHHHhhccCC
Confidence 98777554 26899999999998766544332211110 0111110 136788887762 24
Q ss_pred eEEEEEc-ccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-ccc-cc---cCCcccEEEecccCC-C
Q 012368 247 TAAVFVE-PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAH-EH---YGIFPDIMTLAKPLA-G 319 (465)
Q Consensus 247 ~a~vi~e-p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~-~~~-~~---~~~~pdi~t~sK~lg-~ 319 (465)
+++|++. |.|++| ..++.+.+++|.++|++||+++|+||+|.++-..+.. ... .. .+...-+.+|||.+| .
T Consensus 165 ~~~v~i~~p~NPtG--~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~p 242 (395)
T PRK08175 165 PKMMILGFPSNPTA--QCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMA 242 (395)
T ss_pred ceEEEEeCCCCCCC--CCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCc
Confidence 5555554 655554 4568899999999999999999999999876433321 111 11 122223457999997 6
Q ss_pred ccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccc
Q 012368 320 GLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLG 399 (465)
Q Consensus 320 G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g 399 (465)
|+|+||+++++++++.+........++.+.+.+.++.++|+. .+.+.+++++..+..++.+.+.+...+.....+..|
T Consensus 243 GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~~g 320 (395)
T PRK08175 243 GWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEG--DQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKAS 320 (395)
T ss_pred chhheeeeCCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCEE
Confidence 999999999999998876433334566677788888888863 234444455444444444555444444322233458
Q ss_pred eEEEEEecC-----ChHHHHHHHH-HCCceEeecC---C--CCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 400 LIIGIEFDV-----SATPVVDACR-DSGLLVLTAG---K--GNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 400 ~~~~i~~~~-----~~~~~~~~l~-~~Gv~v~~~~---~--~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
.++|++++. ++.++++.|+ ++||.+.|+. . .+++||++. .+++.+.+++++|.+++++
T Consensus 321 ~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~--~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 321 MYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI--ENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred EEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHh
Confidence 889998842 3577888776 6899998862 1 357999764 5889999999999998865
No 176
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.94 E-value=5.6e-25 Score=222.59 Aligned_cols=347 Identities=14% Similarity=0.103 Sum_probs=212.1
Q ss_pred EEEecccCcccccCCCCC--HHHHHHHHHHHhhcc------ccc-CCCCCHHHHHHHHHHHhhcC----CCeEEecCCHH
Q 012368 99 EYLDLSSGIAVNALGHGD--ADWIKAVVDQANVLT------HVS-NMYYSIPQIELAKRLVACSF----ADRVFFSNTGT 165 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~--p~v~~a~~~~~~~~~------~~~-~~~~~~~~~~la~~l~~~~~----~~~v~~~~sG~ 165 (465)
..+||..+.+. + ... +.+.+++.+.+.... .+. ..+..+.++++++++.+.++ +++|++|+|++
T Consensus 31 ~~i~l~~g~p~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~ 107 (416)
T PRK09440 31 GAIMLGGGNPA--H-IPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQ 107 (416)
T ss_pred CceeccCCCCC--c-cCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChH
Confidence 35788776542 1 122 346666666554311 111 11223446677777765544 67999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCceEEE-EcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC-CCHHHHHhhcC
Q 012368 166 EANEAAIKFARKFQRHSNPDSKEPATEFVS-FTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-GNIEATRKLIQ 243 (465)
Q Consensus 166 eA~~~al~~a~~~t~~~~~~~~~~~~~ii~-~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~le~~l~ 243 (465)
+|+..++++...... +.+++.|++ .+|+|+++...+...+..........+...+. ..+ -|+++|+ +.
T Consensus 108 ~al~~~~~~l~~~~~------~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~--~~ 177 (416)
T PRK09440 108 SAFFYLFNLFAGRRA------DGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQ--FKYHVDFEHLH--ID 177 (416)
T ss_pred HHHHHHHHHHhcccc------CCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccc--cccCCCHHHcc--cC
Confidence 999998886652100 014678999 69999998753322110000000011111110 001 2678876 34
Q ss_pred CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccc-cc-c-ccCCcccEEEecccCCCc
Q 012368 244 PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AH-E-HYGIFPDIMTLAKPLAGG 320 (465)
Q Consensus 244 ~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~-~~-~-~~~~~pdi~t~sK~lg~G 320 (465)
.....+++++|.||+| .+++.+.+++|.++|++||+++|+||+|..+- ....+ .. . ..+...-+.+|||....|
T Consensus 178 ~~~~~i~l~~P~NPTG--~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~-~~~~~~~~~~~~~~~vI~~~SfSK~~~pG 254 (416)
T PRK09440 178 EDTGAICVSRPTNPTG--NVLTDEELEKLDALARQHNIPLLIDNAYGPPF-PGIIFSEATPLWNPNIILCMSLSKLGLPG 254 (416)
T ss_pred CCceEEEEecCCCCCC--ccCCHHHHHHHHHHHHHcCCcEEEeCCccccC-CCcchhhcCccccCCeEEEecccccCCCc
Confidence 3344666677776665 34589999999999999999999999996431 11100 00 0 012223345899974459
Q ss_pred cceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCch-----HHHHHHHHHHHHHHHHHHHHHcCCCceee
Q 012368 321 LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPA-----FLASVSKKGHYFKETLKQKLARNPHVKDV 395 (465)
Q Consensus 321 ~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~-----~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 395 (465)
+|+||+++++++++.+........++.+.+++.++.++|+...-.. +.+.++++.+.+++.|.+.+...+ +...
T Consensus 255 lRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~-~~~~ 333 (416)
T PRK09440 255 VRCGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEP-CLIH 333 (416)
T ss_pred ceEEEEeCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-eEEe
Confidence 9999999999999888654333445678899999988886321111 122233344444444444332222 2222
Q ss_pred ec-cceEEEEEec---CChHHHHHHHHHCCceEeecCC------------CCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 396 RG-LGLIIGIEFD---VSATPVVDACRDSGLLVLTAGK------------GNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 396 ~~-~g~~~~i~~~---~~~~~~~~~l~~~Gv~v~~~~~------------~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
.+ .|.++|++++ .+..++.+.|.++||.+.|+.. .+++||+++ .+++++++++++|.+++++
T Consensus 334 ~p~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~--~~~~~l~~~i~~l~~~~~~ 411 (416)
T PRK09440 334 KPEGAIFLWLWFKDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYV--QDDEEIEKGIAILAEEVEK 411 (416)
T ss_pred cCCCceEEEEECCCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 33 4788888884 2567889999999999988521 137898765 4789999999999999988
Q ss_pred hhhcC
Q 012368 460 LDSNS 464 (465)
Q Consensus 460 ~~~~~ 464 (465)
..+++
T Consensus 412 ~~~~~ 416 (416)
T PRK09440 412 AYAES 416 (416)
T ss_pred HhhcC
Confidence 77653
No 177
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.5e-24 Score=218.18 Aligned_cols=339 Identities=19% Similarity=0.174 Sum_probs=214.2
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhcccc-cCCCCCHHHHHHHHHHHhh---cCCCeEEecCCHHHHHHHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHV-SNMYYSIPQIELAKRLVAC---SFADRVFFSNTGTEANEAAIK 173 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~-~~~~~~~~~~~la~~l~~~---~~~~~v~~~~sG~eA~~~al~ 173 (465)
..++||..+... ++ .++.+.+++.+.......+ ...+..+.++++++.+... ...++|++|+|+++|+..+++
T Consensus 30 ~~~i~l~~~~~~--~~-~~~~~~~a~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~ 106 (397)
T PRK07568 30 IKVYHLNIGQPD--IK-TPEVFFEAIKNYDEEVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMM 106 (397)
T ss_pred CCEEEecCCCCC--CC-CCHHHHHHHHHHhcCCcCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHH
Confidence 346777776542 33 3678888887754432111 1111222344455544321 126799999999999999887
Q ss_pred HHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEc
Q 012368 174 FARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVE 253 (465)
Q Consensus 174 ~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~e 253 (465)
... .++++|++.+|+|..+.......+. .... .+...+..+ ...|+++++++++++...++++.
T Consensus 107 ~l~-----------~~gd~Vl~~~p~y~~~~~~~~~~g~-~~~~---v~~~~~~g~-~~~~~~~l~~~~~~~~~~v~i~~ 170 (397)
T PRK07568 107 AIC-----------DPGDEILVPEPFYANYNGFATSAGV-KIVP---VTTKIEEGF-HLPSKEEIEKLITPKTKAILISN 170 (397)
T ss_pred Hhc-----------CCCCEEEEecCCCccHHHHHHHcCC-EEEE---eecCcccCC-CCCCHHHHHHhcCccceEEEEEC
Confidence 653 1688999999999765433222221 1100 011100000 01257899999875444555667
Q ss_pred ccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-cc-ccccCCccc---EEEecccCCC-ccceeeEE
Q 012368 254 PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WA-HEHYGIFPD---IMTLAKPLAG-GLPIGAAL 327 (465)
Q Consensus 254 p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~-~~-~~~~~~~pd---i~t~sK~lg~-G~~iG~v~ 327 (465)
|.|++| ..++.+.+++|.++|+++|+++|+||+|.+|.+.+.. .. ....+..+. +.+|||.++. |+|+||++
T Consensus 171 p~NPtG--~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~ 248 (397)
T PRK07568 171 PGNPTG--VVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLI 248 (397)
T ss_pred CCCCCC--ccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEe
Confidence 766654 4568888999999999999999999999988555431 11 111122223 3379999995 99999999
Q ss_pred eC-HHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccc-eEEEEE
Q 012368 328 VT-EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLG-LIIGIE 405 (465)
Q Consensus 328 ~~-~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g-~~~~i~ 405 (465)
++ +++++.+..... .+++.+.+.+.++.++|+. .+.+.+++++..+..++.+.+.+..++.+....+.| .++|+.
T Consensus 249 ~~~~~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~ 325 (397)
T PRK07568 249 SKNKELIAAAMKLCQ-ARLSPPTLEQIGAAALLDT--PESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFYIIAK 325 (397)
T ss_pred cCCHHHHHHHHHHhh-ccCCCCcHHHHHHHHHhhC--CHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceEEEEe
Confidence 85 678776643222 2467788899888888863 234455555444444555555555554333333444 556777
Q ss_pred ec-CChHHHHHHHHH------CCceEeecC--------CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 406 FD-VSATPVVDACRD------SGLLVLTAG--------KGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 406 ~~-~~~~~~~~~l~~------~Gv~v~~~~--------~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
++ .+..++.+.|++ +||.+.|+. ..+++|+++. .+++++++++++|.+++++...
T Consensus 326 l~~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~--~~~~~~~~~~~~l~~~l~~~~~ 395 (397)
T PRK07568 326 LPVDDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV--LNEEDLKRAMEILKEALEKYNK 395 (397)
T ss_pred cCCCCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe--CCHHHHHHHHHHHHHHHHHhhc
Confidence 74 356778888875 599998752 1258999764 5689999999999999987653
No 178
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.94 E-value=3.4e-25 Score=217.19 Aligned_cols=286 Identities=14% Similarity=0.053 Sum_probs=189.8
Q ss_pred CCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccC
Q 012368 135 NMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (465)
Q Consensus 135 ~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (465)
..|+.+...+|+++++++++ .++|++|+|++|++..++++ . + ++ +|++.+|+|..+...+...+.
T Consensus 35 ~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~~-~---~--------~~-~vv~~~P~y~~y~~~~~~~G~ 101 (332)
T PRK06425 35 SIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSY-I---N--------VG-NIIIVEPNFNEYKGYAFTHGI 101 (332)
T ss_pred ccCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHH-h---C--------CC-cEEEeCCChHHHHHHHHHcCC
Confidence 34677778899999999987 78999999999999998863 2 1 33 688889999888766655443
Q ss_pred CCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 213 KEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
..... +... . -.|.+.+++ .+...+++++|+||+|. ..+.+.+++|.++|++||++||+||+|..|
T Consensus 102 ~v~~v----p~~~-~----~~~~~~l~~---~~~k~v~l~nP~NPTG~--~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~ 167 (332)
T PRK06425 102 RISAL----PFNL-I----NNNPEILNN---YNFDLIFIVSPDNPLGN--LISRDSLLTISEICRKKGALLFIDEAFIDF 167 (332)
T ss_pred eEEEE----eCCc-c----cCcHHHHhh---cCCCEEEEeCCCCCcCC--ccCHHHHHHHHHHHHHcCCEEEEecchhcc
Confidence 22111 1110 0 013444432 23345666788777764 458899999999999999999999999988
Q ss_pred CCCCcccccc---ccCCcccEEEecccCC-CccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHH
Q 012368 293 GRTGYLWAHE---HYGIFPDIMTLAKPLA-GGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFL 368 (465)
Q Consensus 293 gr~g~~~~~~---~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~ 368 (465)
...+...... .++...-+.||||.++ .|+|+||+++++++++.+... ...++.+.+++.+ +.....+.+.
T Consensus 168 ~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~--~~~~~~~~~~~~~----l~~~~~~~~~ 241 (332)
T PRK06425 168 VPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKI--TEPWSVCDPAIDF----IRSIDLDYVA 241 (332)
T ss_pred ccccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHHHHHHHc--CCCCccCHHHHHH----HHHhhhHHHH
Confidence 5333111111 1122333458999999 799999999999999888642 2334444443322 2222222333
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCChHHHHHHHHHCCceEeecCC-----CCEEEEecCCCCcH
Q 012368 369 ASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGK-----GNVVRLVPPLIISE 443 (465)
Q Consensus 369 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~lRi~~~~~~t~ 443 (465)
++.++..+..++.+.+.+..++.....++.|+|+++.++ +..++.+.|+++||.+.++.. .+++||++ .+.
T Consensus 242 ~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~g~f~~~~~~-~~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~---~~~ 317 (332)
T PRK06425 242 KHSLDIMENERSYLINNLEAMGFRAAGDPSANFITFMIP-DAHDFYSYLLKNGILVRLLDDYECLGEQYIRIAI---RRR 317 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEECCCCCceEEEEEcC-CHHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEe---CCH
Confidence 344444444444444444444422222457889998875 678899999999999988632 26899974 378
Q ss_pred HHHHHHHHHHHHHH
Q 012368 444 QELDQAVEILCKTL 457 (465)
Q Consensus 444 e~i~~~l~~l~~~l 457 (465)
+++++++++|++++
T Consensus 318 ~~~~~l~~al~~~~ 331 (332)
T PRK06425 318 SFNIKLVNALRNFL 331 (332)
T ss_pred HHHHHHHHHHHHHh
Confidence 89999999998765
No 179
>PRK07777 aminotransferase; Validated
Probab=99.94 E-value=9.6e-25 Score=218.78 Aligned_cols=333 Identities=18% Similarity=0.152 Sum_probs=208.0
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHhhccccc--CCCCCHHHHHHHHHHHhhcC----CC-eEEecCCHHHHHHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS--NMYYSIPQIELAKRLVACSF----AD-RVFFSNTGTEANEAA 171 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~la~~l~~~~~----~~-~v~~~~sG~eA~~~a 171 (465)
.++|+..+.+... .++.+.+++.+.+......+ ..+....++++++++.+.++ ++ +|++|+||++|+.++
T Consensus 25 ~~i~l~~g~p~~~---~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 101 (387)
T PRK07777 25 GAVNLGQGFPDED---GPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAA 101 (387)
T ss_pred CeEEccCCCCCCC---CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHH
Confidence 4688888876432 35678888777765421111 11122335556666555555 33 799999999999988
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCC-ceEeeCCCHHHHHhhcCCCCeEEE
Q 012368 172 IKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPG-VNFVEYGNIEATRKLIQPGKTAAV 250 (465)
Q Consensus 172 l~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~le~~l~~~~~a~v 250 (465)
+.... +++++|++..|+|+++...+...+.... . .+..+. ..+. .|++++++++.++...++
T Consensus 102 ~~~~~-----------~~gd~vli~~p~y~~~~~~~~~~g~~~~-~---~~~~~~~~~~~--~d~~~l~~~~~~~~~~v~ 164 (387)
T PRK07777 102 VLGLV-----------EPGDEVLLIEPYYDSYAAVIAMAGAHRV-P---VPLVPDGRGFA--LDLDALRAAVTPRTRALI 164 (387)
T ss_pred HHHhc-----------CCCCEEEEeCCCchhhHHHHHHCCCEEE-E---eecCCccCCCc--CCHHHHHHhcCcccEEEE
Confidence 87553 1688999999999887644333322111 1 111111 0110 278999998875333444
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc-ccccccc-C---CcccEEEecccCC-Ccccee
Q 012368 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LWAHEHY-G---IFPDIMTLAKPLA-GGLPIG 324 (465)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~-~~~~~~~-~---~~pdi~t~sK~lg-~G~~iG 324 (465)
+++|.|+ +|. .++.+.+++|.++|++|++++|+||+|.++...+. ......+ + ...-+.+|||.++ .|+|+|
T Consensus 165 l~~p~NP-tG~-~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG 242 (387)
T PRK07777 165 VNSPHNP-TGT-VLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIG 242 (387)
T ss_pred EcCCCCC-CCc-cCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeE
Confidence 4445444 444 45889999999999999999999999988744332 1111111 1 2223457999998 699999
Q ss_pred eEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEE
Q 012368 325 AALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGI 404 (465)
Q Consensus 325 ~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i 404 (465)
|+++++++++.+.......+++.+.+.+.++..+++.. +.+.+++++..+..++.+.+.+...+.....+..|.++|+
T Consensus 243 ~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~~~~~~ 320 (387)
T PRK07777 243 WACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHE--DAWVAALRDSLQAKRDRLAAGLAEAGFEVHDSAGTYFLCA 320 (387)
T ss_pred EEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHhCCCCccCCCcceEEEe
Confidence 99999998887764444445666666777776666532 3344444444444444444444443321112223556666
Q ss_pred Eec----CChHHHHHHHH-HCCceEeecC------C--CCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 405 EFD----VSATPVVDACR-DSGLLVLTAG------K--GNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 405 ~~~----~~~~~~~~~l~-~~Gv~v~~~~------~--~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
.++ .++.++++.|+ ++||.+.|+. . .+.+||+++ .+++++++++++|.++.
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~--~~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 321 DPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFC--KRDDTLDEAIRRLRALR 384 (387)
T ss_pred cccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEec--CCHHHHHHHHHHHHHHh
Confidence 752 25678999997 5799998763 1 247888765 47999999999998754
No 180
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.94 E-value=1.4e-24 Score=215.43 Aligned_cols=322 Identities=17% Similarity=0.114 Sum_probs=208.4
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFA 175 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a 175 (465)
..++||..+. ++++ .+|.+.+++.+.+..... |+.....+|.+.++++++ .++|++|+|++|++..+++.+
T Consensus 22 ~~~i~l~~~~--n~~~-~~~~~~~a~~~~~~~~~~----Y~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l 94 (360)
T PRK07392 22 DAILDFSASI--NPLG-PPESVIAAIQSALSALRH----YPDPDYRELRLALAQHHQLPPEWILPGNGAAELLTWAGREL 94 (360)
T ss_pred ccEEEeCCcC--CCCC-CCHHHHHHHHHHHHHhhc----CCCcCHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh
Confidence 3678888764 3566 778999998887764221 232224577777877775 789999999999999888854
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceE-eeCCCHHHHHhhcCCCCeEEEEEcc
Q 012368 176 RKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNF-VEYGNIEATRKLIQPGKTAAVFVEP 254 (465)
Q Consensus 176 ~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~le~~l~~~~~a~vi~ep 254 (465)
. +++.|++.+|+|.++...+...+.... . .+...+... ....|++++++... .....++++|
T Consensus 95 ~------------~g~~vlv~~P~y~~~~~~~~~~g~~~~-~---v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~nP 157 (360)
T PRK07392 95 A------------QLRAVYLITPAFGDYRRALRAFGATVK-E---LPLPLDQPSPGLTLRLQTLPPQLT-PNDGLLLNNP 157 (360)
T ss_pred C------------CCCeEEEECCCcHHHHHHHHHcCCeEE-E---EecccccCCcccccCHHHHHHhcc-CCCEEEEeCC
Confidence 3 467899999999888765554432211 1 011111100 00125666665543 3456777788
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccc----ccccCCcccEEEecccCC-CccceeeEEeC
Q 012368 255 IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA----HEHYGIFPDIMTLAKPLA-GGLPIGAALVT 329 (465)
Q Consensus 255 ~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~----~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~ 329 (465)
+||+|-+ .+ .++|.++++++++ +|+||+|.+|...+.... ....+...-+.+|||.++ .|+|+||++++
T Consensus 158 ~NPTG~~--~~---~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~ 231 (360)
T PRK07392 158 HNPTGKL--WS---REAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAH 231 (360)
T ss_pred CCCCCCC--cC---HHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCC
Confidence 7777643 35 4466777788885 666999998854442111 111122233447999999 79999999999
Q ss_pred HHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCC
Q 012368 330 EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS 409 (465)
Q Consensus 330 ~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~ 409 (465)
+++++.+... ...++.+.+++.++.++|+ +..+.+++++..+..++.+.+.+..++.+...++.|.|+++++..+
T Consensus 232 ~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~fl~~~~~~~ 306 (360)
T PRK07392 232 PDRLQRWQQW--RDPWPVNGLAAAAAIAALA---DRDFQQQTWAWLPPAREALFQGLASLPGLTPLPSAANFLLVQSQGS 306 (360)
T ss_pred HHHHHHHHhh--CCCCCCCHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCCEEEEEcCCC
Confidence 9998887632 2457788999999988886 3345554444444444555555555554444456688888887556
Q ss_pred hHHHHHHHH-HCCceEeecCC-----CCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 410 ATPVVDACR-DSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 410 ~~~~~~~l~-~~Gv~v~~~~~-----~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
..++.+.|+ ++||.+.++.. .+++||++. +.++.+++.+.|++++
T Consensus 307 ~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~~~l~~al~~~~ 357 (360)
T PRK07392 307 ALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVR---TEAENQRLLEALAAIL 357 (360)
T ss_pred HHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 678888865 67999998732 368999754 3444556665555544
No 181
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1.5e-25 Score=221.45 Aligned_cols=311 Identities=17% Similarity=0.157 Sum_probs=207.1
Q ss_pred EEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHHH
Q 012368 100 YLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARK 177 (465)
Q Consensus 100 ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~~ 177 (465)
.+|+.+|-. ++| .+|.+ ... ..+.|+.....+|++++++.++ .++|++|+|++|++..+++.+..
T Consensus 30 ~~~l~~Nen--p~~-~~~~~------~~~----~~~~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~ 96 (351)
T PRK01688 30 DVWLNANEY--PTA-VEFQL------TQQ----TLNRYPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCE 96 (351)
T ss_pred ceEecCCCC--CCC-CChhh------ccc----ccccCCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcC
Confidence 588877744 666 33432 111 1244666667899999999987 78999999999999999886542
Q ss_pred HhhhcCCCCCCCC-ceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccC
Q 012368 178 FQRHSNPDSKEPA-TEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQ 256 (465)
Q Consensus 178 ~t~~~~~~~~~~~-~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~ 256 (465)
++ +.|++.+|+|..+...+...+.... . .+...+.. .|++++++++. +...+++++|+|
T Consensus 97 -----------~g~~~vli~~P~y~~y~~~~~~~G~~~~-~---v~~~~~~~----~d~~~l~~~~~-~~~lv~l~nPnN 156 (351)
T PRK01688 97 -----------PGKDAILYCPPTYGMYSVSAETIGVEIR-T---VPTLDNWQ----LDLPAIADNLD-GVKVVYVCSPNN 156 (351)
T ss_pred -----------CCCCEEEEcCCCHHHHHHHHHHcCCEEE-E---eecCCCCC----CCHHHHHHhcc-CCcEEEEeCCCC
Confidence 44 7899999999877644333322111 1 11111111 27899988884 445667788877
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccc-ccccCCcccEEEecccCC-CccceeeEEeCHHHHh
Q 012368 257 GEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA-HEHYGIFPDIMTLAKPLA-GGLPIGAALVTEKVAS 334 (465)
Q Consensus 257 ~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~-~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~i~~ 334 (465)
++|. ..+.+.+++|.+.|++ +++||+||+|..|........ ...++...-+-||||.+| +|+|+||+++++++++
T Consensus 157 PTG~--~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~ 233 (351)
T PRK01688 157 PTGN--LINPQDLRTLLELTRG-KAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVIN 233 (351)
T ss_pred CCCC--CCCHHHHHHHHHhCCC-CcEEEEECchhhcCCCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHHH
Confidence 7763 4588889999999986 689999999988842211111 111222223347999999 6999999999999998
Q ss_pred hccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCc-eeeeccceEEEEEecCChHHH
Q 012368 335 AINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHV-KDVRGLGLIIGIEFDVSATPV 413 (465)
Q Consensus 335 ~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~g~~~~i~~~~~~~~~ 413 (465)
.+... ...|+.+.+++.++.++|+... .++.++..+.....++.+.+.+..++.+ ...++.++|+++.+. +..++
T Consensus 234 ~l~~~--~~~~~v~~~~~~~a~~~L~~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~-~~~~l 309 (351)
T PRK01688 234 LLLKV--IAPYPLSTPVADIAAQALSPQG-IAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT-ASSAV 309 (351)
T ss_pred HHHhc--cCCCCCCHHHHHHHHHHHhcch-HHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC-CHHHH
Confidence 88643 3456777778888888776311 1222222222223344444444555433 244567888888874 56789
Q ss_pred HHHHHHCCceEeecC----CCCEEEEecCCCCcHHHHHHHHHHH
Q 012368 414 VDACRDSGLLVLTAG----KGNVVRLVPPLIISEQELDQAVEIL 453 (465)
Q Consensus 414 ~~~l~~~Gv~v~~~~----~~~~lRi~~~~~~t~e~i~~~l~~l 453 (465)
.+.|+++||.+++++ ..+++|+++. +++++++++++|
T Consensus 310 ~~~L~~~gi~vr~~~~~~~~~~~iRis~~---~~~e~~~l~~al 350 (351)
T PRK01688 310 FKSLWDQGIILRDQNKQPGLSNCLRITIG---TREECQRVIDAL 350 (351)
T ss_pred HHHHHHCCeEEEECCCcCCCCCeEEEeCC---CHHHHHHHHHhh
Confidence 999999999998653 2478999855 789999999887
No 182
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.94 E-value=6.6e-25 Score=215.00 Aligned_cols=302 Identities=21% Similarity=0.226 Sum_probs=207.1
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFA 175 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a 175 (465)
.+.++|..+.. +++. | +.++. .... ..|+++...+++++++++++ .++|++|+|+++++..+.+++
T Consensus 17 ~~~~~~~~~~~--~~~~--~-~~~~~---~~~~----~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~l 84 (330)
T TIGR01140 17 EDWLDFSTGIN--PLGP--P-VPPIP---ASAW----ARYPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRLL 84 (330)
T ss_pred hheeEccccCC--CCCC--C-hhhcc---hHHH----hhCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh
Confidence 34688888763 3432 3 22221 1111 22333335788889998887 589999999999998865542
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEccc
Q 012368 176 RKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPI 255 (465)
Q Consensus 176 ~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~ 255 (465)
. ++ +|++.+|+|+.+....... +..+.+++|++++++.+++ ..+++++.|.
T Consensus 85 ~------------~g-~vl~~~p~y~~~~~~~~~~---------------g~~~~~~~d~~~l~~~~~~-~~~v~i~~p~ 135 (330)
T TIGR01140 85 A------------PG-RVLVLAPTYSEYARAWRAA---------------GHEVVELPDLDRLPAALEE-LDVLVLCNPN 135 (330)
T ss_pred C------------CC-eEEEeCCCcHHHHHHHHHc---------------CCEEEEeCCHHHHHhhccc-CCEEEEeCCC
Confidence 1 35 6999999998876433221 2222333489999999853 3466778886
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEE---EecccCC-CccceeeEEeCHH
Q 012368 256 QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM---TLAKPLA-GGLPIGAALVTEK 331 (465)
Q Consensus 256 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~---t~sK~lg-~G~~iG~v~~~~~ 331 (465)
|++| ..++.+.+++|.++|++||+++|+||+|.+|...... ....+..++++ +|||.+| .|+|+||++++++
T Consensus 136 NPtG--~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~ 211 (330)
T TIGR01140 136 NPTG--RLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASL--APQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPA 211 (330)
T ss_pred CCCC--CCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccch--hhHhccCCCEEEEEecchhhcCchhhhhheeCCHH
Confidence 6655 3458899999999999999999999999887432111 11111112323 7999999 6999999999999
Q ss_pred HHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCChH
Q 012368 332 VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSAT 411 (465)
Q Consensus 332 i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~ 411 (465)
+++.+... ...++.++++++++...++ +.++.++.++..+..++.+.+.++.++.+...++.|.|+|+.+. +..
T Consensus 212 ~~~~l~~~--~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~f~~~~~~-~~~ 285 (330)
T TIGR01140 212 LLARLREA--LGPWTVNGPARAAGRAALA---DTAWQAATRARLAAERARLAALLARLGGLEVVGGTALFLLVRTP-DAA 285 (330)
T ss_pred HHHHHHhc--CCCCCchHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCeEEEEEcC-CHH
Confidence 99888743 3456778888888887776 44555666666666677777777677644444566888888874 457
Q ss_pred HHHHHHHHCCceEeecCC-----CCEEEEecCCCCcHHHHHHHHHHH
Q 012368 412 PVVDACRDSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEIL 453 (465)
Q Consensus 412 ~~~~~l~~~Gv~v~~~~~-----~~~lRi~~~~~~t~e~i~~~l~~l 453 (465)
+++++|+++||.+.++.. .+++|++++ ...++ +.++++|
T Consensus 286 ~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~--~~~~~-~~~~~~l 329 (330)
T TIGR01140 286 ALHEALARRGILIRDFDNFPGLDPRYLRFALP--TDEEN-DRLEEAL 329 (330)
T ss_pred HHHHHHHHCCEEEEECCCCCCCCCCEEEEEec--CHHHH-HHHHHhh
Confidence 899999999999998632 367999754 33344 7777665
No 183
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.94 E-value=1.9e-24 Score=217.62 Aligned_cols=340 Identities=14% Similarity=0.123 Sum_probs=216.9
Q ss_pred CCCEEEecccCcccc-cCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--------CCeEEecCCHHH
Q 012368 96 EGREYLDLSSGIAVN-ALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--------ADRVFFSNTGTE 166 (465)
Q Consensus 96 dG~~ylD~~~~~~~~-~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--------~~~v~~~~sG~e 166 (465)
.|..++|+..+.+.. +.-..++.+.+++.+.+..... ..+.+.....++++.++++++ .++|++|+|+++
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~ 107 (403)
T TIGR01265 29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKF-NGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQ 107 (403)
T ss_pred cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHH
Confidence 467889999887642 1112568899999887764211 111122223344444444432 578999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCC
Q 012368 167 ANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGK 246 (465)
Q Consensus 167 A~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~ 246 (465)
|+.++++++.. ++++|++.+|+|.++...+...+..... .+..+.... --|++++++++.++.
T Consensus 108 al~~~~~~l~~-----------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~----~~~~~~~~~--~~d~~~l~~~~~~~~ 170 (403)
T TIGR01265 108 AIEICIEALAN-----------PGANILVPRPGFPLYDTRAAFSGLEVRL----YDLLPEKDW--EIDLDGLEALADEKT 170 (403)
T ss_pred HHHHHHHHhCC-----------CCCEEEEeCCCchhHHHHHHHcCCEEEE----ecCCcccCC--ccCHHHHHHHhCcCc
Confidence 99999997651 6889999999997665433322211110 011111000 027899999887655
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-ccccccC---CcccEEEecccCC-Ccc
Q 012368 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAHEHYG---IFPDIMTLAKPLA-GGL 321 (465)
Q Consensus 247 ~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~-~~~~~~~---~~pdi~t~sK~lg-~G~ 321 (465)
..++++.|.|++| ...+.+.+++|.++|+++|+++|+||+|.+|.+.+.. .....+. ...-+.+|||.++ .|+
T Consensus 171 ~~v~i~~p~NPtG--~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGl 248 (403)
T TIGR01265 171 VAIVVINPSNPCG--SVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGW 248 (403)
T ss_pred cEEEEecCCCCCC--CCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcc
Confidence 5667777766655 3458888999999999999999999999988554422 1111111 1223347999976 599
Q ss_pred ceeeEEeC--HH-----HHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCcee
Q 012368 322 PIGAALVT--EK-----VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKD 394 (465)
Q Consensus 322 ~iG~v~~~--~~-----i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 394 (465)
|+||++++ ++ +++.+... ...+++.+.+++.++.++|+.. .+.+.++.++....-++.+.+.+..++.+..
T Consensus 249 RiG~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 326 (403)
T TIGR01265 249 RLGWIIIHDPHGIFRDTVLQGLKNL-LQRILGPATIVQGALPDILENT-PQEFFDGKISVLKSNAELCYEELKDIPGLVC 326 (403)
T ss_pred eEEEEEEeCchhhhHHHHHHHHHHH-hhhhcCCChHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHHHhcCCCcee
Confidence 99999983 22 33333221 1124567889999998888642 2344444444444444455555555543332
Q ss_pred -eeccceEEEEEecC-------ChHHHHHHHH-HCCceEeecC---CCCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 395 -VRGLGLIIGIEFDV-------SATPVVDACR-DSGLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 395 -~~~~g~~~~i~~~~-------~~~~~~~~l~-~~Gv~v~~~~---~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
.+..|.++|++++. +..++++.|+ ++||.+.|+. ..+++|+++. .+++.+++++++|.+++++
T Consensus 327 ~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~--~~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 327 PKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITIT--VPESMLEEACSRIKEFCER 401 (403)
T ss_pred cCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 34457888888742 4667888864 7899998864 2478999765 4688999999999988865
No 184
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.94 E-value=1.1e-24 Score=219.88 Aligned_cols=338 Identities=14% Similarity=0.097 Sum_probs=203.9
Q ss_pred CCEEEecccCcccccCCCCCHHHHHHHHHHHhhcc-------cccCCCCCHHHHHHHHHHHhhcC----CCeEEecCCHH
Q 012368 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLT-------HVSNMYYSIPQIELAKRLVACSF----ADRVFFSNTGT 165 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~-------~~~~~~~~~~~~~la~~l~~~~~----~~~v~~~~sG~ 165 (465)
|..++|+..+.. .++ .+|.+.+++.+.+.... +....+..+.++++++++.+..+ +++|++|+|+.
T Consensus 33 ~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~ 109 (409)
T PRK07590 33 EAKIIRLGIGDV--TQP-LPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAK 109 (409)
T ss_pred CCceEEecCcCC--CCC-CCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHH
Confidence 556788888765 344 56889999988876521 11111122235555555544333 78999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcC-C
Q 012368 166 EANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ-P 244 (465)
Q Consensus 166 eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~-~ 244 (465)
+|+..++.+ . +++++|++.+|+|+++...+...+.... ..+... ...+..+|.+.-+.+..-+. +
T Consensus 110 ~al~~l~~~-~-----------~~gd~V~v~~P~Y~~~~~~~~~~g~~~~-~~~~~~-~~~~~~v~~~~~~~~~~d~~~~ 175 (409)
T PRK07590 110 CDTGNILDI-F-----------GPDNTIAVTDPVYPVYVDTNVMAGRTGE-ANEDGR-YSGIVYLPCTAENNFVPELPEE 175 (409)
T ss_pred HHHHHHHHh-c-----------CCCCEEEEeCCCCcchHHHHHHcCCccc-cccccc-ccceeEeecccccCCcccCccc
Confidence 998875432 1 1689999999999988765544432200 000000 00122222210000111111 2
Q ss_pred CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-cccccc-C---CcccEEEecccCC-
Q 012368 245 GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAHEHY-G---IFPDIMTLAKPLA- 318 (465)
Q Consensus 245 ~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~-~~~~~~-~---~~pdi~t~sK~lg- 318 (465)
+..++++++|.||+| .+++.+.+++|.++|++||++||+||+|..|-..+.. ...... + ....+.||||.++
T Consensus 176 ~~k~i~l~nP~NPTG--~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~ 253 (409)
T PRK07590 176 KVDIIYLCFPNNPTG--TVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGF 253 (409)
T ss_pred CceEEEEeCCCCCcC--CcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCC
Confidence 233455567766665 4568999999999999999999999999987433321 111111 1 2233447999998
Q ss_pred CccceeeEEeCHHHHhhccC-----------CCCcCCC-CChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Q 012368 319 GGLPIGAALVTEKVASAINY-----------GDHGSTF-AGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKL 386 (465)
Q Consensus 319 ~G~~iG~v~~~~~i~~~~~~-----------~~~~~t~-~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~ 386 (465)
.|+|+||+++++++++.+.. .....++ +.+.+++.++.++|+.. ...+.+++++.....++.+.+.+
T Consensus 254 pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~r~~l~~~L 332 (409)
T PRK07590 254 TGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPE-GKAQIKELIDYYMENAKIIREGL 332 (409)
T ss_pred cCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999998873210 0112233 46788888888877521 12334444444333344444444
Q ss_pred HcCCCceeeec-cceEEEEEec--CChHHHHHHHH-HCCceEeecC---C--CCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 387 ARNPHVKDVRG-LGLIIGIEFD--VSATPVVDACR-DSGLLVLTAG---K--GNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 387 ~~~~~~~~~~~-~g~~~~i~~~--~~~~~~~~~l~-~~Gv~v~~~~---~--~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
..++ +....+ .|.++|+.++ .+..+++..|+ ++||.+.|+. . .+++||+. ..+++++++++++|.+++
T Consensus 333 ~~~~-~~~~~~~g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~~l~rl~~~~ 409 (409)
T PRK07590 333 ESAG-FEVYGGVNAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSA--FGSRENVLEAMERIKKAL 409 (409)
T ss_pred HhcC-CceecCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEc--cCCHHHHHHHHHHHHhhC
Confidence 4444 223333 4678889884 24677888877 5699998763 1 25899973 458999999999998753
No 185
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.94 E-value=4.3e-25 Score=219.55 Aligned_cols=325 Identities=15% Similarity=0.135 Sum_probs=206.9
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHh--hcccccCCCCC-HHHHHHHHHHHhhcC--------CC-eEEecCCHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQAN--VLTHVSNMYYS-IPQIELAKRLVACSF--------AD-RVFFSNTGTE 166 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~--~~~~~~~~~~~-~~~~~la~~l~~~~~--------~~-~v~~~~sG~e 166 (465)
++|||.++.. .+++++|.+.+++.+..+ ........|+. ....+|++.++++++ .+ .|++++|..+
T Consensus 2 ~~I~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~ 79 (363)
T PF00155_consen 2 DVINLGSNAP--LLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQA 79 (363)
T ss_dssp TEEESSSSST--SSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHH
T ss_pred CEEEEECCCC--CCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEeccccc
Confidence 4789988865 445556666655555443 11111223333 336677777777665 67 7888877777
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEee-------CCCHHHHH
Q 012368 167 ANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVE-------YGNIEATR 239 (465)
Q Consensus 167 A~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le 239 (465)
++..++.++. . .+++.|++.+|+|.++...+...+.. +..+| ..|+++|+
T Consensus 80 ~~~~~~~~~~--~--------~~~~~vlv~~P~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~ 136 (363)
T PF00155_consen 80 ALFLLLRLLK--I--------NPGDTVLVPDPCYPSYIEAARLLGAE-------------VIPVPLDSENDFHLDPEALE 136 (363)
T ss_dssp HHHHHHHHHH--S--------STTSEEEEEESSSTHHHHHHHHTTSE-------------EEEEEEEETTTTEETHHHHH
T ss_pred chhhhhhccc--c--------cccccceecCCccccccccccccCce-------------eeeccccccccccccccccc
Confidence 7776666553 1 15889999999998876554433221 11222 23899999
Q ss_pred hhcCC---C--Ce-EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccc-c-ccccCCccc--
Q 012368 240 KLIQP---G--KT-AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-A-HEHYGIFPD-- 309 (465)
Q Consensus 240 ~~l~~---~--~~-a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~-~-~~~~~~~pd-- 309 (465)
+.+++ + ++ ..++.+|.|++ |. .++.+.+++|.++|++||+++|+||+|.++......+ . .......++
T Consensus 137 ~~l~~~~~~~~~~~~v~~~~p~nPt-G~-~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi 214 (363)
T PF00155_consen 137 EALDELPSKGPRPKAVLICNPNNPT-GS-VLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVI 214 (363)
T ss_dssp HHHHTSHTTTETEEEEEEESSBTTT-TB-B--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEE
T ss_pred cccccccccccccceeeeccccccc-cc-ccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccce
Confidence 98874 1 23 44445554444 43 4588999999999999999999999999874332211 1 111222222
Q ss_pred -EEEecccCC-CccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHHHH
Q 012368 310 -IMTLAKPLA-GGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN-PAFLASVSKKGHYFKETLKQKL 386 (465)
Q Consensus 310 -i~t~sK~lg-~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~-~~~~~~~~~~~~~l~~~l~~~~ 386 (465)
+.++||.+| .|+|+||+++++++++.+... ...+..+.+.+.++.+.+..... ..+.++.++.....++.+.+.+
T Consensus 215 ~~~S~SK~~g~~GlRvG~i~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L 292 (363)
T PF00155_consen 215 VVGSLSKSFGLPGLRVGYIVAPPELIERLRRF--QRSGLSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREAL 292 (363)
T ss_dssp EEEESTTTTTSGGGTEEEEEEEHHHHHHHHHH--HHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeccccccccccccccccchhhhhhhhhhc--cccccccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHH
Confidence 337899998 599999999999999888643 22333377777777777764321 1233444444444444444444
Q ss_pred HcCCCceeeeccceEEEEEecC-ChHHHHHHHHHC-CceEeecC---CCCEEEEecCCCCcHHHHHHHHHHH
Q 012368 387 ARNPHVKDVRGLGLIIGIEFDV-SATPVVDACRDS-GLLVLTAG---KGNVVRLVPPLIISEQELDQAVEIL 453 (465)
Q Consensus 387 ~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~l~~~-Gv~v~~~~---~~~~lRi~~~~~~t~e~i~~~l~~l 453 (465)
.+.+........|.++++.++. +..++++.|+++ ||.+.|+. ..+++|+++ ..++++++++++++|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 293 EEIGITVLPPEAGFFLWVRLDPNDAEELAQELLEEYGILVRPGSYFGVPGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp HHTTSEEEHHSBSSEEEEEESHHHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred HHhhhheeeccCccEEEEEcccchHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe-ccCCHHHHHHHHhhC
Confidence 4444332333356777777643 357899999998 99999853 257899988 688999999999886
No 186
>PRK09265 aminotransferase AlaT; Validated
Probab=99.94 E-value=2e-24 Score=217.66 Aligned_cols=342 Identities=14% Similarity=0.150 Sum_probs=210.2
Q ss_pred CCCEEEecccCcccccCCC-CCHHHHHHHHHHHhhcccccC-CCCCHHHHHHHHHHHhhc--C--CCeEEecCCHHHHHH
Q 012368 96 EGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVSN-MYYSIPQIELAKRLVACS--F--ADRVFFSNTGTEANE 169 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~--~--~~~v~~~~sG~eA~~ 169 (465)
.|+..+||..|... +++. .++.+.+++.+.+.....+.. .+..+.++++++++.+.. + .++|++++|+++++.
T Consensus 31 ~~~~~i~l~~g~p~-~~~~~~~~~i~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~ 109 (404)
T PRK09265 31 EGHKILKLNIGNPA-PFGFEAPDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIV 109 (404)
T ss_pred cCCCeEEecCCCCC-cCCCCCCHHHHHHHHHHhhcCCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHH
Confidence 55677888876543 4554 567788888876654211111 111222444444443221 2 678999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEE
Q 012368 170 AAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAA 249 (465)
Q Consensus 170 ~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~ 249 (465)
.+++.+. .+++.|++.+|+|..+...+...+...... +......+ ..|++++++.++++...+
T Consensus 110 ~~~~~~~-----------~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~----~~~~~~~~--~~d~~~l~~~~~~~~~~v 172 (404)
T PRK09265 110 MAMQALL-----------NNGDEVLVPAPDYPLWTAAVSLSGGKPVHY----LCDEEAGW--FPDLDDIRSKITPRTKAI 172 (404)
T ss_pred HHHHHhC-----------CCCCEEEEeCCCCcChHHHHHHcCCEEEEE----ecccccCC--CCCHHHHHHhccccceEE
Confidence 9888654 168899999999987665443332211110 10000000 027899999887544556
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-cccccc--C-CcccEEEecccCC-Ccccee
Q 012368 250 VFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAHEHY--G-IFPDIMTLAKPLA-GGLPIG 324 (465)
Q Consensus 250 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~-~~~~~~--~-~~pdi~t~sK~lg-~G~~iG 324 (465)
+++.|.|++| ...+.+.+++|.++|++||+++|+||+|.+|-..+.. ...... + ....+-+|||.++ .|+|+|
T Consensus 173 ~l~~P~NPtG--~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG 250 (404)
T PRK09265 173 VIINPNNPTG--AVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVG 250 (404)
T ss_pred EEECCCCCCC--cCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceE
Confidence 7778866655 3458899999999999999999999999887443321 111111 1 1122346899996 599999
Q ss_pred eEEe--CHH----HHhhccCCCCcCCCCChHHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHHHHHcCCCceee-e
Q 012368 325 AALV--TEK----VASAINYGDHGSTFAGSPLVCNAAIAVLDKISN-PAFLASVSKKGHYFKETLKQKLARNPHVKDV-R 396 (465)
Q Consensus 325 ~v~~--~~~----i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~ 396 (465)
|+++ +++ +++.+... ...+++.|.+++.++.++|...+. ..+.+..+.. ...++.+.+.+..++.+... +
T Consensus 251 ~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~-~~~r~~~~~~L~~~~~~~~~~p 328 (404)
T PRK09265 251 WMVLSGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQSINELILPGGRL-YEQRDRAWELLNAIPGVSCVKP 328 (404)
T ss_pred EEEEeCchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHH-HHHHHHHHHHHhcCCCCcccCC
Confidence 9996 343 33333211 123466788899998888852211 1122111111 12234444444455433333 3
Q ss_pred ccceEEEEEecC------Ch-HHHHHHHHHCCceEeecC-----CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 397 GLGLIIGIEFDV------SA-TPVVDACRDSGLLVLTAG-----KGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 397 ~~g~~~~i~~~~------~~-~~~~~~l~~~Gv~v~~~~-----~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
..|.++|+.++. .. ..+.+.|.++||.+.|+. ..+++|+++ ..+++++++++++|.++++..+
T Consensus 329 ~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~--~~~~e~l~~~l~rl~~~l~~~~ 403 (404)
T PRK09265 329 KGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVT--LPRVDDLEEAIGRIGRFLSGYR 403 (404)
T ss_pred CcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEe--CCCHHHHHHHHHHHHHHHHHhc
Confidence 447788877732 23 346677789999998763 136899976 4689999999999999987654
No 187
>PRK08354 putative aminotransferase; Provisional
Probab=99.94 E-value=4.4e-24 Score=207.40 Aligned_cols=300 Identities=14% Similarity=0.073 Sum_probs=201.9
Q ss_pred CCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHH
Q 012368 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFA 175 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a 175 (465)
+...+|||..+. ++++ +|.+.+++.+.+... ..|+. ...++++++++++ ++|++|+|++||+..++.++
T Consensus 6 ~~~~~i~l~~~~--np~~--p~~~~~a~~~~~~~~----~~yp~--~~~l~~~ia~~~~-~~I~vt~G~~~al~~~~~~~ 74 (311)
T PRK08354 6 REEGLIDFSASV--NPYP--PEWLDEMFERAKEIS----GRYTY--YEWLEEEFSKLFG-EPIVITAGITEALYLIGILA 74 (311)
T ss_pred CccceeEecCCC--CCCC--CHHHHHHHHHHHHHh----hcCCC--hHHHHHHHHHHHC-CCEEECCCHHHHHHHHHHhh
Confidence 344689999874 4554 588999998876542 22332 4568888888877 57999999999998776533
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEccc
Q 012368 176 RKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPI 255 (465)
Q Consensus 176 ~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~ 255 (465)
. +++.|++.+|+|.++...+...+.... .++ .|++.+++.+++ ...+++++|.
T Consensus 75 ~------------~gd~vlv~~P~y~~~~~~~~~~g~~~~-------------~~~-~d~~~l~~~~~~-~~~vi~~~P~ 127 (311)
T PRK08354 75 L------------RDRKVIIPRHTYGEYERVARFFAARII-------------KGP-NDPEKLEELVER-NSVVFFCNPN 127 (311)
T ss_pred C------------CCCeEEEeCCCcHHHHHHHHHcCCEEe-------------ecC-CCHHHHHHhhcC-CCEEEEecCC
Confidence 2 588999999999888765544332211 111 378899888863 4568888997
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCC-CccceeeEEeCHHHHh
Q 012368 256 QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLA-GGLPIGAALVTEKVAS 334 (465)
Q Consensus 256 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~i~~ 334 (465)
|++| ...+.+.+++|.++|++||+++|+||+|.+|...+.. .. .+...-+.+|||.++ .|+|+||+++ +.+
T Consensus 128 NPTG--~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~--~~-~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~ 199 (311)
T PRK08354 128 NPDG--KFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPES--PE-GENIIKLRTFTKSYGLPGIRVGYVKG---FEE 199 (311)
T ss_pred CCCC--CccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccc--cC-CCcEEEEeccHhhcCCccceeeeeee---hHH
Confidence 7665 3568899999999999999999999999988443321 11 222333457999999 7999999998 334
Q ss_pred hccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCChHHHH
Q 012368 335 AINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSATPVV 414 (465)
Q Consensus 335 ~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~ 414 (465)
.+.... ..+..+.++++++.+.++ +. .+++++..+.+++..+.+.... ..++.|.|+++++. +..+++
T Consensus 200 ~l~~~~--~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~l~~~l----~~~~~~~~~~~~~~-~~~~~~ 267 (311)
T PRK08354 200 AFRSVR--MPWSIGSTGYAFLEFLIE----DD-FEHLRKTMPLIWREKERFEKAL----YVKSDANFFIKDVG-DAEKFV 267 (311)
T ss_pred HHHHcC--CCccCCHHHHHHHHHHHH----hH-HHHHHHHHHHHHHHHHHHHHhc----CCCCCCcEEEEECC-CHHHHH
Confidence 443222 234456666666655554 11 2344444444444443322221 12456777777653 567899
Q ss_pred HHHHHCCceEeecCC---CCEEEEecCCCCcHHHHHHHHHHHHHH
Q 012368 415 DACRDSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKT 456 (465)
Q Consensus 415 ~~l~~~Gv~v~~~~~---~~~lRi~~~~~~t~e~i~~~l~~l~~~ 456 (465)
+.|.++||.+.++.. ++++||++. +.++.+++++.|+++
T Consensus 268 ~~l~~~gv~v~~g~~f~~~~~iRi~~~---~~~~~~~l~~al~~~ 309 (311)
T PRK08354 268 EFLKRNGILVRDCTSFGLPGYIRFSVR---DREENEKLIRALREW 309 (311)
T ss_pred HHHHHCCeEEEecccCCCCCeEEEEeC---CHHHHHHHHHHHHHh
Confidence 999999999998742 478999744 556677777777654
No 188
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.94 E-value=8.7e-25 Score=224.53 Aligned_cols=326 Identities=12% Similarity=0.077 Sum_probs=206.7
Q ss_pred CHHHHHHHHHHHhhcc-----cccCCCCCHHHHHHHHHHHhhcC----CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCC
Q 012368 116 DADWIKAVVDQANVLT-----HVSNMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEANEAAIKFARKFQRHSNPDS 186 (465)
Q Consensus 116 ~p~v~~a~~~~~~~~~-----~~~~~~~~~~~~~la~~l~~~~~----~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~ 186 (465)
+..+++++.+.++... +....+..+.++++++++.+..+ +++|++|+|+++|+..+++++..
T Consensus 90 P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~--------- 160 (481)
T PTZ00377 90 PADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIG--------- 160 (481)
T ss_pred CHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcc---------
Confidence 4467777776655421 11111223346666666665433 78999999999999999987641
Q ss_pred CCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCC------CCeEEEEEcccCCCCC
Q 012368 187 KEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP------GKTAAVFVEPIQGEGG 260 (465)
Q Consensus 187 ~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~------~~~a~vi~ep~~~~~G 260 (465)
+++|.|++.+|+|+++...+...+...... ++..+..+- -|+++|++++++ +..++++++|.|++|
T Consensus 161 -~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v----~~~~~~~~~--~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG- 232 (481)
T PTZ00377 161 -DPSDGVMIPIPQYPLYSAAITLLGGKQVPY----YLDEEKGWS--LDQEELEEAYEQAVRNGITPRALVVINPGNPTG- 232 (481)
T ss_pred -CCCCEEEECCCCchhHHHHHHHcCCEEEEE----EeccccCCC--CCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCC-
Confidence 168999999999998876655544332211 111111110 278999998852 233467777876665
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCC-ccc-cccc--cCCc---------ccEEEecccC-C-Cccceee
Q 012368 261 IYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTG-YLW-AHEH--YGIF---------PDIMTLAKPL-A-GGLPIGA 325 (465)
Q Consensus 261 ~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g-~~~-~~~~--~~~~---------pdi~t~sK~l-g-~G~~iG~ 325 (465)
.+++.+.+++|.++|++||++||+||+|..+.+.+ ..+ .... .++. .-+-+|||.+ + .|||+||
T Consensus 233 -~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~ 311 (481)
T PTZ00377 233 -QVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGY 311 (481)
T ss_pred -cCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEE
Confidence 45689999999999999999999999998864422 111 1100 0111 1223689986 6 4999999
Q ss_pred EEe---CHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhc--C---chHHHHHHHHH---HHHHHHHHHHHHcCCCcee
Q 012368 326 ALV---TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKIS--N---PAFLASVSKKG---HYFKETLKQKLARNPHVKD 394 (465)
Q Consensus 326 v~~---~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~--~---~~~~~~~~~~~---~~l~~~l~~~~~~~~~~~~ 394 (465)
+++ ++++++.+.... ...++.|+++|.++.++|+... + +.+.+++++.. +..++.+.+.+..++.+..
T Consensus 312 ~~~~~~p~~li~~l~~~~-~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~ 390 (481)
T PTZ00377 312 FELTNIPPEVREQIYKLA-SINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSC 390 (481)
T ss_pred EEEeCCCHHHHHHHHHHh-heecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEe
Confidence 986 889988886533 2345788899999998885311 1 12333333322 2233344444555554554
Q ss_pred eeccc-eEEEEEecC--------------ChHHHHHH-HHHCCceEeecCC------CCEEEEecCCCCcHHHHHHHHHH
Q 012368 395 VRGLG-LIIGIEFDV--------------SATPVVDA-CRDSGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEI 452 (465)
Q Consensus 395 ~~~~g-~~~~i~~~~--------------~~~~~~~~-l~~~Gv~v~~~~~------~~~lRi~~~~~~t~e~i~~~l~~ 452 (465)
..+.| .++|+++.. ....++.. |.++||.+.|+.. .+++|+++. .+++++++++++
T Consensus 391 ~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~--~~~e~l~~~l~r 468 (481)
T PTZ00377 391 QPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL--PPEEQIEEMVKK 468 (481)
T ss_pred ecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC--CCHHHHHHHHHH
Confidence 55555 566655421 12334444 4577999988641 247999765 678899999999
Q ss_pred HHHHHHHhhh
Q 012368 453 LCKTLPVLDS 462 (465)
Q Consensus 453 l~~~l~~~~~ 462 (465)
|.+++++..+
T Consensus 469 l~~~~~~~~~ 478 (481)
T PTZ00377 469 IKEFHESFMK 478 (481)
T ss_pred HHHHHHHHHH
Confidence 9999987654
No 189
>PLN02672 methionine S-methyltransferase
Probab=99.94 E-value=1.5e-24 Score=233.10 Aligned_cols=340 Identities=11% Similarity=0.101 Sum_probs=218.7
Q ss_pred EEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--C---CeEEecCCHH
Q 012368 91 KLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--A---DRVFFSNTGT 165 (465)
Q Consensus 91 ~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~---~~v~~~~sG~ 165 (465)
++.+.+|..+|++..|.. .++ .+|.+++++.+.+.+... ..+..+.+.++++++++.++ . ++|++++|++
T Consensus 690 ~~~~~~g~~vI~LsinE~--d~p-pPp~V~eAi~eal~~~~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~ 764 (1082)
T PLN02672 690 SVSGSQESSLIHMDVDES--FLP-VPSAVKASIFESFVRQNI--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSL 764 (1082)
T ss_pred CCcccCCCCEEEEeCCCC--CCC-CCHHHHHHHHHHHhhcCC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHH
Confidence 455667889999998865 555 788999999987765322 22233458899999999876 2 4899999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCC-
Q 012368 166 EANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP- 244 (465)
Q Consensus 166 eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~- 244 (465)
+++..++++... +++.|++.+|+|..+...+...+...... +...+..+. .|+++|++++++
T Consensus 765 elL~lll~aLl~-----------pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~V----pl~~e~gf~--lD~d~Le~al~~~ 827 (1082)
T PLN02672 765 ALFNKLVLCCVQ-----------EGGTLCFPAGSNGTYVSAAKFLKANFRRI----PTKSSDGFK--LTAKTLASTLETV 827 (1082)
T ss_pred HHHHHHHHHHcC-----------CCCEEEEeCCChHHHHHHHHHcCCEEEEE----ecccccCCC--CCHHHHHHHhccC
Confidence 999888886652 68999999999998886665544322211 221111111 278899999864
Q ss_pred CCeEEEEEccc-CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccc---ccc----cc-C-----CcccE
Q 012368 245 GKTAAVFVEPI-QGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW---AHE----HY-G-----IFPDI 310 (465)
Q Consensus 245 ~~~a~vi~ep~-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~---~~~----~~-~-----~~pdi 310 (465)
....+++++|+ ||+| .+++++.+++|.++|++||++||+||+|.++-+.+... ... .+ . ...-+
T Consensus 828 ~~~~I~L~nPnhNPTG--~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL 905 (1082)
T PLN02672 828 KKPWVYISGPTINPTG--LLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALL 905 (1082)
T ss_pred CCCEEEEECcCCCCcC--ccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEE
Confidence 34578888997 5554 45699999999999999999999999999765544311 110 11 1 11122
Q ss_pred EEecccCCC-ccceeeEEeCH-HHHhhccCCCC-cCCCCChHHHHHHHHHHHHHhcCchHHHHHHHH---HHHHHHHHHH
Q 012368 311 MTLAKPLAG-GLPIGAALVTE-KVASAINYGDH-GSTFAGSPLVCNAAIAVLDKISNPAFLASVSKK---GHYFKETLKQ 384 (465)
Q Consensus 311 ~t~sK~lg~-G~~iG~v~~~~-~i~~~~~~~~~-~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~---~~~l~~~l~~ 384 (465)
.+|||.++. |+|+||+++++ ++++.+..... ...+..+.+++.++++++.. +...+.+++++. .+..++.+.+
T Consensus 906 ~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~-~~~~~~~~l~e~r~~Lk~rRd~L~e 984 (1082)
T PLN02672 906 GGLSTELLSGGHEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQ-KSSDLLDGVAEQKKILKSRAERLKE 984 (1082)
T ss_pred eCcHHhhccHHHHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhc-cCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 378999985 89999999964 58887754211 11122233344444433320 112222222222 3333334444
Q ss_pred HHHcCCCceeeeccce-EEEEEec-------------------CChHHHHHHHHHC-CceEeecC---CCCEEEEecCCC
Q 012368 385 KLARNPHVKDVRGLGL-IIGIEFD-------------------VSATPVVDACRDS-GLLVLTAG---KGNVVRLVPPLI 440 (465)
Q Consensus 385 ~~~~~~~~~~~~~~g~-~~~i~~~-------------------~~~~~~~~~l~~~-Gv~v~~~~---~~~~lRi~~~~~ 440 (465)
.+..++. ...++.|. ++|+.+. .+..++++.|+++ ||.+.|+. ..+++||++.
T Consensus 985 ~L~~~Gi-~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa-- 1061 (1082)
T PLN02672 985 TLEACGW-DVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFA-- 1061 (1082)
T ss_pred HHHHCCC-eEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEec--
Confidence 4444443 34445554 4555431 1456799999875 99999863 2478898764
Q ss_pred CcHHHHHHHHHHHHHHHH
Q 012368 441 ISEQELDQAVEILCKTLP 458 (465)
Q Consensus 441 ~t~e~i~~~l~~l~~~l~ 458 (465)
.+++++++++++|++++.
T Consensus 1062 ~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1062 LEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 588899999999998664
No 190
>PRK03321 putative aminotransferase; Provisional
Probab=99.94 E-value=6.7e-25 Score=217.17 Aligned_cols=321 Identities=18% Similarity=0.167 Sum_probs=211.7
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFAR 176 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~ 176 (465)
.+||+..+.+ .+| .+|.+.+++.+.+..... |+.....++++.++++++ .++|++++|+++++..+++...
T Consensus 23 ~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~~~----y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~ 95 (352)
T PRK03321 23 GAIKLSSNET--PFG-PLPSVRAAIARAAAGVNR----YPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATA 95 (352)
T ss_pred cceeccCCCC--CCC-CCHHHHHHHHHHHHhcCc----CCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhc
Confidence 4789888755 355 567899999887654322 334446788888888876 5689999999998888777543
Q ss_pred HHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccC
Q 012368 177 KFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQ 256 (465)
Q Consensus 177 ~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~ 256 (465)
.+++.|++..|+|..+.......+. .... .+..+.. ..|++++++.++++...+++++|.|
T Consensus 96 -----------~~gd~Vli~~p~y~~~~~~~~~~g~-~~~~---v~~~~~~----~~~~~~l~~~~~~~~~~v~l~~p~N 156 (352)
T PRK03321 96 -----------GPGDEVIFAWRSFEAYPILVQVAGA-TPVQ---VPLTPDH----THDLDAMAAAITDRTRLIFVCNPNN 156 (352)
T ss_pred -----------CCCCEEEeCCCCHHHHHHHHHHcCC-EEEE---ccCCCCC----CCCHHHHHHhhccCCCEEEEeCCCC
Confidence 1688999999998654322221211 1111 1111111 1278999999875444455556655
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-ccccccCCcccEE---EecccCC-CccceeeEEeCHH
Q 012368 257 GEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL-WAHEHYGIFPDIM---TLAKPLA-GGLPIGAALVTEK 331 (465)
Q Consensus 257 ~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~-~~~~~~~~~pdi~---t~sK~lg-~G~~iG~v~~~~~ 331 (465)
++ |.+ .+.+.+.++.+.| ++++++|+||+|.+|.+.+.. .........++++ +|||.+| .|+|+||++++++
T Consensus 157 Pt-G~~-~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~ 233 (352)
T PRK03321 157 PT-GTV-VTPAELARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPE 233 (352)
T ss_pred Cc-CCC-cCHHHHHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHH
Confidence 55 444 3555555555544 369999999999887544321 1122222223444 7899998 6999999999999
Q ss_pred HHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCChH
Q 012368 332 VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSAT 411 (465)
Q Consensus 332 i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~ 411 (465)
+++.+... ..+++.+++++.++.++|+. .+.+.+++++..+. ++.+.+.+...+. ...+..|.++++.+.....
T Consensus 234 ~~~~~~~~--~~~~~~s~~~q~~a~~~l~~--~~~~~~~~~~~~~~-r~~~~~~L~~~~~-~~~~~~g~~i~i~l~~~~~ 307 (352)
T PRK03321 234 VIAALRKV--AVPFSVNSLAQAAAIASLAA--EDELLERVDAVVAE-RDRVRAALRAAGW-TVPPSQANFVWLPLGERTA 307 (352)
T ss_pred HHHHHHHh--cCCCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHH-HHHHHHHHHHCCC-ccCCCCCCEEEEeCCCCHH
Confidence 99988743 35677899999998888862 23343444333322 2334444444442 2234468888888755677
Q ss_pred HHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 412 PVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 412 ~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
++.+.|.++||.+.+.+. +.+||++ .+.+++++++++|++++.
T Consensus 308 ~~~~~l~~~gI~v~~~~~-~~iRi~~---~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 308 DFAAAAAEAGVVVRPFAG-EGVRVTI---GAPEENDAFLRAARAWRA 350 (352)
T ss_pred HHHHHHHHCCEEEEccCC-CcEEEee---CCHHHHHHHHHHHHHHhc
Confidence 899999999999988654 5699974 588999999999998764
No 191
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.94 E-value=4.5e-24 Score=209.17 Aligned_cols=297 Identities=13% Similarity=0.095 Sum_probs=198.2
Q ss_pred CCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCC--CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCce
Q 012368 115 GDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFA--DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATE 192 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~--~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ 192 (465)
+||.|+++..+++++++ +..+.+.+|+++|+++++. +++++++||++|+..++..+.. +++.
T Consensus 34 ~~~~~~~~~~~~~~~~~-----g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~-----------~gd~ 97 (346)
T TIGR03576 34 GGFKIDEEDLELLETYV-----GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEP-----------PGRK 97 (346)
T ss_pred CChhHHHHHHHHHHHhc-----CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCC-----------CCCE
Confidence 78999999999988752 3457799999999999985 8999999999999999986652 6888
Q ss_pred EEEEcC--CcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHH
Q 012368 193 FVSFTN--SFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQ 270 (465)
Q Consensus 193 ii~~~~--~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~ 270 (465)
|+++.| -+|.+......+.+. .++.++|+++++. . + ++.+|++++. ++.|.+ .+.+.|+
T Consensus 98 Vli~~~d~p~~~s~~~~~~l~ga--------------~~~~~~~l~~l~~-~-~-~~~lIiitg~-s~~G~v-~~~~~L~ 158 (346)
T TIGR03576 98 VVHYLPEKPAHPSIPRSCKLAGA--------------EYFESDELSELKK-I-D-GTSLVVITGS-TMDLKV-VSEEDLK 158 (346)
T ss_pred EEECCCCCCCchhHHHHHHHcCC--------------EEeccCCHHHHhh-C-c-CceEEEEECC-CCCCcc-cCHHHHH
Confidence 887533 233333232222221 1223356776543 2 2 3566777764 555654 3678899
Q ss_pred HHHHHHHHhCCEEEEeccccCC--CCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCCh
Q 012368 271 FLRDACDDAGALLVFDEVQCGL--GRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGS 348 (465)
Q Consensus 271 ~l~~l~~~~g~llI~DEv~~g~--gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~ 348 (465)
+|.++|++||++||+||+|..+ +..|.. ....++...-+.||||++ +|+++||+++++++++.+........++.+
T Consensus 159 ~i~~la~~~~~~livDEAy~~~~~~~~~~~-~~~~~~~divv~s~SKal-aG~r~G~v~~~~~li~~l~~~~~~~~~s~~ 236 (346)
T TIGR03576 159 RVIKQAKSKEAIVLVDDASGARVRRLYGQP-PALDLGADLVVTSTDKLM-DGPRGGLLAGRKELVDKIKSVGEQFGLEAQ 236 (346)
T ss_pred HHHHHHHHcCCEEEEECCccccccccCCCC-CHHHcCCcEEEeccchhc-cccceEEEEeCHHHHHHHHHhhcCcccCcc
Confidence 9999999999999999999743 112221 112223222234789965 367999999999999988765444455578
Q ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC-ChHHH-HHHHHHCCceEee
Q 012368 349 PLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV-SATPV-VDACRDSGLLVLT 426 (465)
Q Consensus 349 ~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~-~~~l~~~Gv~v~~ 426 (465)
++.++|+.++|+....+...+.++++.+.+.+.+. .+.. .+..++|++++++. +..++ .+.|.++||.+.|
T Consensus 237 ~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~----~~~~---~~~~~~f~~~~~~~~~~~~~~~~ll~~~gV~v~~ 309 (346)
T TIGR03576 237 APLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFD----KLNV---ERTPTGFVIKGVEEEKLIEIGLDLLRNYGIITIT 309 (346)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH----hCCC---CcCCCeEEEEeCCCCCHHHHHHHHHHhCCEEEeC
Confidence 88999999999865434445555555555555444 2222 12345577777742 23344 4555578999998
Q ss_pred cC----CCCEEEEecCCCCcHH---HHHHHHHHHHHHH
Q 012368 427 AG----KGNVVRLVPPLIISEQ---ELDQAVEILCKTL 457 (465)
Q Consensus 427 ~~----~~~~lRi~~~~~~t~e---~i~~~l~~l~~~l 457 (465)
+. .++++||++. ..++ +++.++++|++.+
T Consensus 310 ~~~f~~~~~~vRis~~--~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 310 AVGMPGASKTLRFDLA--AKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred CcccCCCCCeEEEEEe--cChHHhcCHHHHHHHHHhcc
Confidence 53 1478999754 3333 7999999998765
No 192
>PLN02721 threonine aldolase
Probab=99.93 E-value=7.7e-24 Score=209.72 Aligned_cols=327 Identities=14% Similarity=0.143 Sum_probs=205.5
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKF 178 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~ 178 (465)
+++||.++.++ ..+|.+.+++.+. ..... ..++++...+|++.++++++.+.++++++|++++..++.+...
T Consensus 6 ~~~~~~~~~~~----~~~~~~~~a~~~~--~~~~~-~~~~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~~~- 77 (353)
T PLN02721 6 RVVDLRSDTVT----KPTDAMRAAMANA--EVDDD-VLGYDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVHCD- 77 (353)
T ss_pred hhhhhhccccc----CCCHHHHHHHHhc--cCCCc-ccCCCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHHcc-
Confidence 56788888764 2678899998764 11111 2344556789999999999977789999999998877776541
Q ss_pred hhhcCCCCCCCCceEEEEcCCcccCccc--cccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCC------CCeEEE
Q 012368 179 QRHSNPDSKEPATEFVSFTNSFHGRTMG--ALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP------GKTAAV 250 (465)
Q Consensus 179 t~~~~~~~~~~~~~ii~~~~~yhg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~------~~~a~v 250 (465)
.++++|++.+++|...... .....+.... +.+...... .|++++++++++ .++++|
T Consensus 78 ---------~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~---~v~~~~~~~----~d~~~l~~~i~~~~~~~~~~~~~v 141 (353)
T PLN02721 78 ---------VRGSEVILGDNSHIHLYENGGISTLGGVHPR---TVKNNEDGT----MDLDAIEAAIRPKGDDHFPTTRLI 141 (353)
T ss_pred ---------CCCCeEEEcCccceehhcccchhhhcCceeE---ecCCCcCCC----cCHHHHHHHHHhccCCCCCcceEE
Confidence 1578999999987433221 1111111110 011111111 278999999862 357788
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc-cccccccCCccc--EEEecccCCCccceee-E
Q 012368 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LWAHEHYGIFPD--IMTLAKPLAGGLPIGA-A 326 (465)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~-~~~~~~~~~~pd--i~t~sK~lg~G~~iG~-v 326 (465)
+++++++++|...++.+++++|.++|++||++||+||+|. ++.... ...........| ++++||++++ ++|+ +
T Consensus 142 ~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~-~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~--~~G~~~ 218 (353)
T PLN02721 142 CLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARI-FNASVALGVPVHRLVKAADSVSVCLSKGLGA--PVGSVI 218 (353)
T ss_pred EEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhh-hcchhhhCCCHHHHhhhCCEEEEecccccCC--ceeeEE
Confidence 8888766655556788999999999999999999999975 321110 001111111233 4578999874 5665 6
Q ss_pred EeCHHHHhhccCCCC--cCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCce--eeeccceEE
Q 012368 327 LVTEKVASAINYGDH--GSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVK--DVRGLGLII 402 (465)
Q Consensus 327 ~~~~~i~~~~~~~~~--~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~g~~~ 402 (465)
++++++++.+..... ..+....+..++++..+++.. .+..++..++.+++.+.|+ +++.+. ..+..+.++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~L~----~~~~~~~~~~~~~~~~~ 292 (353)
T PLN02721 219 VGSKSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQEN--VPKLEDDHKKAKLLAEGLN----QIKGLRVNVAAVETNIV 292 (353)
T ss_pred ecCHHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH----hCCCcEEecCCccceEE
Confidence 678888776543211 111111122233334444322 1112333344445554444 443221 223346677
Q ss_pred EEEec----CChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 403 GIEFD----VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 403 ~i~~~----~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
++.+. .....+++.|.++||.+.+.+. .++|+++++.++++|+++++++|++++..
T Consensus 293 ~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~~-~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 293 YFDITDGSRITAEKLCKSLEEHGVLLMPGNS-SRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred EEEccCCccccHHHHHHHHHhCCcEEecCCC-ceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 77773 2467899999999999998865 78999999899999999999999988753
No 193
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.9e-23 Score=209.78 Aligned_cols=332 Identities=16% Similarity=0.138 Sum_probs=209.7
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhccc----c-cCCCCCHHHHHHHHHHHhhc----CCCeEEecCCHHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTH----V-SNMYYSIPQIELAKRLVACS----FADRVFFSNTGTEAN 168 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~----~-~~~~~~~~~~~la~~l~~~~----~~~~v~~~~sG~eA~ 168 (465)
...+||..+.+. + ..++.+.+++.+.++.... + ...+....+..+++.+.+.+ .+++|++++|+++++
T Consensus 33 ~~~~~l~~g~p~--~-~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al 109 (394)
T PRK06836 33 DNVFDFSLGNPS--V-PPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGAL 109 (394)
T ss_pred CCeEEecCcCCC--C-CCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHH
Confidence 457888776542 2 2567888888877653211 1 11112233555666655443 277899999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeE
Q 012368 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA 248 (465)
Q Consensus 169 ~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a 248 (465)
..+++.+.. +++.|++.+|+|.++.......+....+ .+..++. + .-|+++++++++++...
T Consensus 110 ~~~~~~l~~-----------~gd~Vli~~p~~~~~~~~~~~~g~~v~~----v~~~~~~-~--~~d~~~l~~~~~~~~~~ 171 (394)
T PRK06836 110 NVALKAILN-----------PGDEVIVFAPYFVEYRFYVDNHGGKLVV----VPTDTDT-F--QPDLDALEAAITPKTKA 171 (394)
T ss_pred HHHHHHhcC-----------CCCEEEEcCCCCccHHHHHHHcCCEEEE----EecCCcc-C--cCCHHHHHhhcCcCceE
Confidence 998886641 6889999999998876443322211111 1111110 0 02789999999754344
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHH------hCCEEEEeccccCCCCCCcc--ccccccCCcccEEEecccCC-C
Q 012368 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDD------AGALLVFDEVQCGLGRTGYL--WAHEHYGIFPDIMTLAKPLA-G 319 (465)
Q Consensus 249 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~------~g~llI~DEv~~g~gr~g~~--~~~~~~~~~pdi~t~sK~lg-~ 319 (465)
++++.|+|++| . ..+.+.+++|.++|++ ||+++|+||+|.+|...+.. .....++...-+.+|||.++ .
T Consensus 172 v~~~~p~NPtG-~-~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~p 249 (394)
T PRK06836 172 VIINSPNNPTG-V-VYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLP 249 (394)
T ss_pred EEEeCCCCCCC-c-CCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCc
Confidence 44455554444 3 4588899999999999 89999999999987443321 11112222233347899999 6
Q ss_pred ccceeeEEeCHHHHhh------ccCC-CCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 012368 320 GLPIGAALVTEKVASA------INYG-DHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHV 392 (465)
Q Consensus 320 G~~iG~v~~~~~i~~~------~~~~-~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 392 (465)
|+|+||+++++++.+. +... .....++.+++.+.++...++. ....+.++++.+.+.+.|+ +++..
T Consensus 250 GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~r~~l~~~L~----~~g~~ 322 (394)
T PRK06836 250 GERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDA---TVDVSIYKRNRDLLYDGLT----ELGFE 322 (394)
T ss_pred ceeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHH----hCCCE
Confidence 9999999998876332 1111 1112245677788887766642 2223344445444444443 44422
Q ss_pred eeeeccceEEEEEec-CChHHHHHHHHHCCceEeecC---CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 393 KDVRGLGLIIGIEFD-VSATPVVDACRDSGLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 393 ~~~~~~g~~~~i~~~-~~~~~~~~~l~~~Gv~v~~~~---~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
...+..|.++|+.++ .+..++++.|.++||.+.++. .++++||+++ .+++++++++++|++++++.+
T Consensus 323 ~~~~~gg~~~~~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~~~i~~l~~~l~~~~ 393 (394)
T PRK06836 323 CVKPQGAFYLFPKSPEEDDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC--VDTETIERSLPAFEKLAKEYK 393 (394)
T ss_pred eecCCceEEEEEeCCCCCHHHHHHHHHhCCEEEECchhcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhc
Confidence 122333667777664 356788888999999999874 2478999876 589999999999999987653
No 194
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.93 E-value=8.9e-24 Score=212.67 Aligned_cols=337 Identities=13% Similarity=0.057 Sum_probs=199.9
Q ss_pred CCEEEecccCcccccCCCCCHHHHHHHHHHHhhccc--ccCCC-CCHHHHHHHHHHHhhc-----CCCeEEecCCHHHHH
Q 012368 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTH--VSNMY-YSIPQIELAKRLVACS-----FADRVFFSNTGTEAN 168 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~--~~~~~-~~~~~~~la~~l~~~~-----~~~~v~~~~sG~eA~ 168 (465)
|..++|+..+.. .++ .+|.+.+++.+.+.+... ....| +.....+|.+.+++++ .+++|++|+|+++++
T Consensus 32 ~~~~i~l~~~~~--~~~-~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al 108 (402)
T TIGR03542 32 SADIIRLGIGDT--TQP-LPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDV 108 (402)
T ss_pred CCCeEEcCCCCC--CCC-CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHH
Confidence 466788888755 333 468889999888765311 01112 2223445555555532 378999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHH-hhcC-CCC
Q 012368 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATR-KLIQ-PGK 246 (465)
Q Consensus 169 ~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le-~~l~-~~~ 246 (465)
..++.+ . . ++++|++.+|+|+++...+...+.. ..... ......+..+|.++-+.+. +... .+.
T Consensus 109 ~~l~~l-~--~---------~gd~Vlv~~P~y~~~~~~~~~~g~~-~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 174 (402)
T TIGR03542 109 FRLQSL-F--G---------SDNTVAVQDPVYPAYVDSNVMAGRA-GVLDD-DGRYSKITYLPCTKENNFIPDLPEEPKI 174 (402)
T ss_pred HHHHHh-c--C---------CCCEEEEeCCCCcchHHHHHHcCCc-ccccc-ccccceEEEeecchhhCCCCCccccCCc
Confidence 875432 2 1 5789999999999887655443321 00000 0000012222321100010 0111 223
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc-cccc-ccc---CCcccEEEecccCC-Cc
Q 012368 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LWAH-EHY---GIFPDIMTLAKPLA-GG 320 (465)
Q Consensus 247 ~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~-~~~~-~~~---~~~pdi~t~sK~lg-~G 320 (465)
.++++++|.||+| .+++.+.+++|.++|++||++||+||+|..|...+. .... ... +....+.+|||.+| .|
T Consensus 175 ~~i~l~nP~NPTG--~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pG 252 (402)
T TIGR03542 175 DIIYLCSPNNPTG--TVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTG 252 (402)
T ss_pred eEEEEeCCCCCCC--ccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCC
Confidence 4555666666655 456899999999999999999999999998743332 1111 111 22233458999998 69
Q ss_pred cceeeEEeCHHHH--------hhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 012368 321 LPIGAALVTEKVA--------SAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHV 392 (465)
Q Consensus 321 ~~iG~v~~~~~i~--------~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 392 (465)
+|+||++++++++ ..+.........+.+.+++.++.++++.... ....+.++.....++.+.+.++.++ +
T Consensus 253 lRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~~-~ 330 (402)
T TIGR03542 253 VRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGL-QPILEAISYYMENARILRKALEAAG-F 330 (402)
T ss_pred cceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcch-hHHHHHHHHHHHHHHHHHHHHHhcC-c
Confidence 9999999998876 2221111112234677888887777752111 1122222222223333444444443 2
Q ss_pred eeeec-cceEEEEEecC--ChHHHHHHHH-HCCceEeecC---C--CCEEEEecCCCCcHHHHHHHHHHHHHH
Q 012368 393 KDVRG-LGLIIGIEFDV--SATPVVDACR-DSGLLVLTAG---K--GNVVRLVPPLIISEQELDQAVEILCKT 456 (465)
Q Consensus 393 ~~~~~-~g~~~~i~~~~--~~~~~~~~l~-~~Gv~v~~~~---~--~~~lRi~~~~~~t~e~i~~~l~~l~~~ 456 (465)
....+ .|.++|+.++. +..++++.|+ ++||.+.++. . .+++||+. ..+++++++++++|+++
T Consensus 331 ~~~~~~~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~--~~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 331 KVYGGEHAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSA--FGKRENIVEACERIKEA 401 (402)
T ss_pred eecCCCceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEe--cCCHHHHHHHHHHHHhh
Confidence 22333 46788998843 5678888887 5699998863 1 36899974 44889999999999875
No 195
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.93 E-value=5.8e-24 Score=216.92 Aligned_cols=301 Identities=18% Similarity=0.101 Sum_probs=191.2
Q ss_pred HHHHHHHHHHHhhc------CCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 140 IPQIELAKRLVACS------FADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 140 ~~~~~la~~l~~~~------~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
..++++++++.+.+ .+++|++|+|+++++..++.+.. ++++.|++.+|+|.++........+.
T Consensus 90 ~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~-----------~pGd~Vlv~~P~Y~~~~~~~~~~~g~ 158 (468)
T PLN02450 90 AFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLA-----------EPGDAFLLPTPYYPGFDRDLKWRTGV 158 (468)
T ss_pred HHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhC-----------CCCCEEEECCCCCCchHHHHhhcCCc
Confidence 34667777776542 26789999999999999888665 27899999999998886544321221
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCC-----CCe-EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEec
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQP-----GKT-AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDE 287 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-----~~~-a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DE 287 (465)
.... .+......+. .|+++++++++. .++ ++++++|.||+| .+++.+.+++|.++|++||++||+||
T Consensus 159 ~~v~---v~~~~~~~~~--~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG--~~~s~e~l~~ll~~a~~~~~~iI~DE 231 (468)
T PLN02450 159 EIVP---IHCSSSNGFQ--ITESALEEAYQQAQKLNLKVKGVLITNPSNPLG--TTTTRTELNLLVDFITAKNIHLISDE 231 (468)
T ss_pred EEEE---EecCCccCCc--CCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCC--cccCHHHHHHHHHHHHHCCcEEEEEc
Confidence 1111 1111111110 167888877642 234 466677877766 34689999999999999999999999
Q ss_pred cccCCCCCCccc-c-ccc-----------cCCcccEEEecccCC-CccceeeEEeCHH-HHhhccCCCCcCCCCChHHHH
Q 012368 288 VQCGLGRTGYLW-A-HEH-----------YGIFPDIMTLAKPLA-GGLPIGAALVTEK-VASAINYGDHGSTFAGSPLVC 352 (465)
Q Consensus 288 v~~g~gr~g~~~-~-~~~-----------~~~~pdi~t~sK~lg-~G~~iG~v~~~~~-i~~~~~~~~~~~t~~~~~~~~ 352 (465)
+|.++-+.+..+ . ... .+...-+-+|||.++ +|+|+||++++++ +++.+.... ...+.+.+++
T Consensus 232 ~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~--~~~~~s~~~Q 309 (468)
T PLN02450 232 IYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMS--SFGLVSSQTQ 309 (468)
T ss_pred cccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHh--hcCCCCHHHH
Confidence 999764444211 1 111 111222447999998 6999999999754 555554221 1123577889
Q ss_pred HHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC--------ChHHHHHHHH-HCCc
Q 012368 353 NAAIAVLDKISN-PAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV--------SATPVVDACR-DSGL 422 (465)
Q Consensus 353 ~aa~a~L~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~--------~~~~~~~~l~-~~Gv 422 (465)
.++.++|+...- ..+.++.++.....++.+.+.+.+++.....+..|.|+|+.++. ...+++..|+ ++||
T Consensus 310 ~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV 389 (468)
T PLN02450 310 YLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKL 389 (468)
T ss_pred HHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCE
Confidence 888888863211 12333334444444444555555554322223346688888731 1234666776 4799
Q ss_pred eEeecCC-----CCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 423 LVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 423 ~v~~~~~-----~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
.+.|+.. .+++|++++. .+++++++++++|++++.+..
T Consensus 390 ~v~PG~~f~~~~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 390 NISPGSSCHCTEPGWFRVCFAN-MSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred EEeCccccCCCCCCEEEEEecC-CCHHHHHHHHHHHHHHHHhcc
Confidence 9998731 3689997653 478999999999999987654
No 196
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.1e-23 Score=206.93 Aligned_cols=312 Identities=14% Similarity=0.141 Sum_probs=199.3
Q ss_pred CCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHH
Q 012368 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIK 173 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~ 173 (465)
.|..++||..+.. +++ .+|.+.+++.+.+.... ...|+.....+++++++++++ .++|++|+|+++++..+++
T Consensus 16 ~~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~--~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~ 90 (337)
T PRK03967 16 EGNYRIWLDKNEN--PFD-LPEELKEEIFEELKRVP--FNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVK 90 (337)
T ss_pred CCCceEEecCCCC--CCC-CCHHHHHHHHHHhhcCc--cccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHH
Confidence 3456788888754 454 56889999988775421 123444446778888888876 7899999999999987766
Q ss_pred HHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEc
Q 012368 174 FARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVE 253 (465)
Q Consensus 174 ~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~e 253 (465)
.. +++.|++.+|+|..+.......+. .... .+...+.. .|++++++.+. +....++++
T Consensus 91 ~~-------------~gd~V~v~~P~y~~~~~~~~~~g~-~~~~---v~~~~~~~----~d~~~l~~~~~-~~~~v~~~~ 148 (337)
T PRK03967 91 LF-------------EGKHIVITPPTFGMYSFYAKLNGI-PVID---VPLKEDFT----IDGERIAEKAK-NASAVFICS 148 (337)
T ss_pred Hh-------------CCCeEEEeCCChHHHHHHHHHcCC-eEEE---eecCCCCC----cCHHHHHHhcc-CCCEEEEeC
Confidence 43 278899999999765433222221 1111 11111111 27788888764 334566778
Q ss_pred ccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccc-ccccCCcccEEEecccCC-CccceeeEEeCHH
Q 012368 254 PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA-HEHYGIFPDIMTLAKPLA-GGLPIGAALVTEK 331 (465)
Q Consensus 254 p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~-~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~ 331 (465)
|.|++|.+ .+. ++|.+++ ++++++|+||+|.+|.. ..... .+......-+.+|||.++ .|+|+||++++++
T Consensus 149 P~NPtG~~--~~~---~~l~~i~-~~~~~ii~De~y~~~~~-~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~ 221 (337)
T PRK03967 149 PNNPTGNL--QPE---EEILKVL-ETGKPVVLDEAYAEFSG-KSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEE 221 (337)
T ss_pred CCCCCCCC--CCH---HHHHHHH-hcCCEEEEECchhhhcc-cchHHHHhhCCCEEEEecchHhhcchhhhheeeecCHH
Confidence 87666633 354 4555666 47999999999998732 11111 111122233447999999 7999999999999
Q ss_pred HHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCChH
Q 012368 332 VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSAT 411 (465)
Q Consensus 332 i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~ 411 (465)
+++.+.... ..++.+.+++.++.++|+.. +.+.+..+.. ...++.+.+.+.++ ..++.|.++|+.+
T Consensus 222 ~i~~~~~~~--~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~-~~~r~~l~~~L~~~----~~~~~~~~~~~~~----- 287 (337)
T PRK03967 222 IIDALYRIK--PPFSLNILTMKIVRLALDHY--DLIEERIDYI-IKERERVRRELGEY----AYPSDANFLLLKL----- 287 (337)
T ss_pred HHHHHHhhc--CCCCCCHHHHHHHHHHHhCH--HHHHHHHHHH-HHHHHHHHHHhccC----cCCCCCcEEEEhH-----
Confidence 988886432 34677889999998888632 1222222222 22233344333332 2345678887765
Q ss_pred HHHHHHHHCCceEeecCC--CCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 412 PVVDACRDSGLLVLTAGK--GNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 412 ~~~~~l~~~Gv~v~~~~~--~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
.+.+.|+++||.+.+... .+++|+++. +.++.+++++.|+++..
T Consensus 288 ~~~~~l~~~gi~v~~~~~~~~~~~Ri~~~---~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 288 DAYDYLLENGIVVRKLSGRLEGHIRVTVG---KREENDEFIKALKEIKE 333 (337)
T ss_pred HHHHHHHHCCEEEEeCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 278889999999976532 468999744 66778888888877654
No 197
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=6.3e-23 Score=190.84 Aligned_cols=340 Identities=16% Similarity=0.165 Sum_probs=230.0
Q ss_pred CEEEecccCcccccCCC--CCHHHHHHHHHHHhhccc---ccCCCCCHHHHHHHHHHHhhcC----CCeEEecCCHHHHH
Q 012368 98 REYLDLSSGIAVNALGH--GDADWIKAVVDQANVLTH---VSNMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEAN 168 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh--~~p~v~~a~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~----~~~v~~~~sG~eA~ 168 (465)
+.+|-+..|.++. +|- ..++..+|+.++++.+.. .++.+....+.++++.+.+... ++.|++|+|.++|+
T Consensus 61 k~iipl~~GDPsv-~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAI 139 (447)
T KOG0259|consen 61 KPILPLGHGDPSV-YPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAI 139 (447)
T ss_pred ceeccCCCCCCCc-cccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHH
Confidence 4677666666543 342 567888999999886432 1222233446677777655543 78999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCc-eEeeCCCHHHHHhhcCCCCe
Q 012368 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGV-NFVEYGNIEATRKLIQPGKT 247 (465)
Q Consensus 169 ~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~le~~l~~~~~ 247 (465)
+.++.++. +++..|+++.|+|.-+...+...+ -.. + .| .+.++- ..+ |++.+|.++++++.
T Consensus 140 e~~i~~LA-----------~p~aNILlPrPGfp~Y~~~a~~~~-lEV-R-~y-dlLPe~~weI---DL~~veal~DENT~ 201 (447)
T KOG0259|consen 140 ELAISSLA-----------NPGANILLPRPGFPLYDTRAIYSG-LEV-R-YY-DLLPEKDWEI---DLDGVEALADENTV 201 (447)
T ss_pred HHHHHHhc-----------CCCCceecCCCCCchHHHhhhhcC-cee-E-ee-cccCccccee---chHHHHHhhccCee
Confidence 99998765 278899999999965543322211 111 0 11 112221 111 89999999998899
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccc-ccccc-CCcccEE--EecccCC-Cccc
Q 012368 248 AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEHY-GIFPDIM--TLAKPLA-GGLP 322 (465)
Q Consensus 248 a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~-~~~~~-~~~pdi~--t~sK~lg-~G~~ 322 (465)
|+|+++|.|+.|++ ++.+-|++|+++|+++++++|.||||..+.+.+..| ....+ .+.|-+. .+||.+- .|||
T Consensus 202 AivviNP~NPcGnV--ys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWR 279 (447)
T KOG0259|consen 202 AIVVINPNNPCGNV--YSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWR 279 (447)
T ss_pred EEEEeCCCCCCccc--ccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCce
Confidence 99999999999865 599999999999999999999999998865555433 33333 4566554 3678765 6999
Q ss_pred eeeEEeCHH--------HHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCce-
Q 012368 323 IGAALVTEK--------VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVK- 393 (465)
Q Consensus 323 iG~v~~~~~--------i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~- 393 (465)
+||++.... +++.+.. ....+...+.+.|+|.-..|+.- .+++.++.....+.-.+...+.+++.|.+.
T Consensus 280 lGWi~~hD~~gvf~~~~~~q~~~~-~~~~~~~p~TiiQ~AlP~IL~kT-p~efF~k~~~~lk~na~l~y~~Lk~IP~l~c 357 (447)
T KOG0259|consen 280 LGWIALHDPRGVFRDTKVVQGIKN-FLDIIPGPATIIQGALPDILEKT-PEEFFDKKLSFLKSNADLCYSRLKDIPCLTC 357 (447)
T ss_pred eeeEEEecccccccchHHHHHHHH-HHhccCCccHhHHHHhHHHHHhC-hHHHHHHHHHHHHhhHHHHHHHHhcCCCccc
Confidence 999986431 1122221 11234455667777766666632 245655555555555555556677778666
Q ss_pred eeeccceEEE-EEec-------CChHHHHHHHH-HCCceEeecC---CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 394 DVRGLGLIIG-IEFD-------VSATPVVDACR-DSGLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 394 ~~~~~g~~~~-i~~~-------~~~~~~~~~l~-~~Gv~v~~~~---~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
.+++.|.++. +.++ .+...|+..|. |+.+++.|+. ..+++|++ ++...+.++++++||+++..+..
T Consensus 358 p~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~--i~~~~~~leea~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 358 PVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIV--ITVEEEMLEEAFSRIKEFCDRHS 435 (447)
T ss_pred CcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEE--EccChHHHHHHHHHHHHHHHhhh
Confidence 6777777654 3332 35567888886 6788888874 36899995 46688899999999999887654
Q ss_pred h
Q 012368 462 S 462 (465)
Q Consensus 462 ~ 462 (465)
+
T Consensus 436 ~ 436 (447)
T KOG0259|consen 436 K 436 (447)
T ss_pred h
Confidence 3
No 198
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.93 E-value=7.5e-24 Score=213.26 Aligned_cols=293 Identities=12% Similarity=0.083 Sum_probs=182.5
Q ss_pred HHHHHHHHHHHhhc----CCCeEE--ecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 140 IPQIELAKRLVACS----FADRVF--FSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 140 ~~~~~la~~l~~~~----~~~~v~--~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+.++++++++.+.. .+++|+ .|+||++|+..++.+++.+.. +++.|++.+|+|+++...+...+..
T Consensus 76 ~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~--------~Gd~Vlv~~P~y~~~~~~~~~~G~~ 147 (404)
T PTZ00376 76 SFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLP--------AGTTVYVSNPTWPNHVNIFKSAGLN 147 (404)
T ss_pred HHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcC--------CCCEEEEcCCCchhHHHHHHHcCCc
Confidence 34556666654433 256888 489999999998876555443 6899999999999988665554433
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCC--C-CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQP--G-KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC 290 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--~-~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~ 290 (465)
.... ++..+..+ -.|++.++++++. . +...++++|.||+| ..++++.+++|.++|++||+++|+||+|.
T Consensus 148 ~~~v----~l~~~~~~--~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG--~~~s~~~~~~l~~~a~~~~~~ii~De~Y~ 219 (404)
T PTZ00376 148 VKEY----RYYDPKTK--GLDFDGMLEDLRTAPNGSVVLLHACAHNPTG--VDPTEEQWKEIADVMKRKNLIPFFDMAYQ 219 (404)
T ss_pred eeec----cccCcccC--CcCHHHHHHHHHhCCCCCEEEEeCCCCCCCC--CCCCHHHHHHHHHHHHhCCcEEEEehhhc
Confidence 2211 22111000 0178889888852 2 23333456666665 45699999999999999999999999999
Q ss_pred CCCCCCc---c---ccccc-cCCcccEEEecccCC-CccceeeE---EeCHHHHhhccCC---CCcCCC-CChHHHHHHH
Q 012368 291 GLGRTGY---L---WAHEH-YGIFPDIMTLAKPLA-GGLPIGAA---LVTEKVASAINYG---DHGSTF-AGSPLVCNAA 355 (465)
Q Consensus 291 g~gr~g~---~---~~~~~-~~~~pdi~t~sK~lg-~G~~iG~v---~~~~~i~~~~~~~---~~~~t~-~~~~~~~~aa 355 (465)
+|...+. . ..+.. .+...-+.+|||.++ .|+|+||+ ++++++++.+... ....++ +.+++++.++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~ 299 (404)
T PTZ00376 220 GFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIA 299 (404)
T ss_pred CccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHH
Confidence 8854331 1 11111 112234458999999 69999998 5687755543210 112233 3567888888
Q ss_pred HHHHHHhcC-chH-------HHHHHHHHHHHHHHHHHHHHcCC-Cceee-eccceEEEEEecCChHHHHHHHHHC-CceE
Q 012368 356 IAVLDKISN-PAF-------LASVSKKGHYFKETLKQKLARNP-HVKDV-RGLGLIIGIEFDVSATPVVDACRDS-GLLV 424 (465)
Q Consensus 356 ~a~L~~~~~-~~~-------~~~~~~~~~~l~~~l~~~~~~~~-~~~~~-~~~g~~~~i~~~~~~~~~~~~l~~~-Gv~v 424 (465)
.++|+...- +.+ .++++++.+.+.+.|.+. ..+ .+... +..|.++|+.+ ..+++++|+++ ||++
T Consensus 300 ~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~--~~~~~~~~~~p~gg~f~~~~~---~~~~~~~L~~~~~v~v 374 (404)
T PTZ00376 300 DRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKAL--GSPGDWEHIINQIGMFSFTGL---TKEQVERLIEKYHIYL 374 (404)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcccccccCceEEEecCC---CHHHHHHHHHhCCEee
Confidence 888853110 112 223334444444444332 111 12222 23355666655 35788888876 9999
Q ss_pred eecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 425 LTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 425 ~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
.|++ |++++. .+.++++.++++|++++..
T Consensus 375 ~p~~-----Ris~~~-~~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 375 LDNG-----RISVAG-LTSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred cCCC-----eEEEec-cCHHhHHHHHHHHHHHHhc
Confidence 8862 887643 6899999999999988753
No 199
>PLN02231 alanine transaminase
Probab=99.93 E-value=9.3e-24 Score=217.42 Aligned_cols=325 Identities=13% Similarity=0.063 Sum_probs=201.7
Q ss_pred HHHHHHHHHHHhhc-c-----cccCCCCCHHHHHHHHHHHhhcC----CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCC
Q 012368 117 ADWIKAVVDQANVL-T-----HVSNMYYSIPQIELAKRLVACSF----ADRVFFSNTGTEANEAAIKFARKFQRHSNPDS 186 (465)
Q Consensus 117 p~v~~a~~~~~~~~-~-----~~~~~~~~~~~~~la~~l~~~~~----~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~ 186 (465)
.++++++.+.+... . +....+..+.++.+++++.++.+ +++|++|+|+++|+..+++++..
T Consensus 143 ~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~--------- 213 (534)
T PLN02231 143 ADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR--------- 213 (534)
T ss_pred HHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhcc---------
Confidence 35666555655541 1 11122233446677777766544 78999999999999999997752
Q ss_pred CCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCC------CCeEEEEEcccCCCCC
Q 012368 187 KEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP------GKTAAVFVEPIQGEGG 260 (465)
Q Consensus 187 ~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~------~~~a~vi~ep~~~~~G 260 (465)
++++.|++.+|+|.++.......+...... ++..+..+ .-|+++|+++++. ...++++++|.|++|
T Consensus 214 -~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~----~l~~~~~~--~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG- 285 (534)
T PLN02231 214 -SEKDGILCPIPQYPLYSASIALHGGTLVPY----YLDEATGW--GLEISELKKQLEDARSKGITVRALVVINPGNPTG- 285 (534)
T ss_pred -CCCCEEEEeCCCChhHHHHHHHcCCEEEEE----ecCcccCC--CCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCC-
Confidence 157899999999998876554444322111 11111100 0278999988852 233467777876666
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCC-Cccc-ccccc----CC---cccEE---EecccC-C-CccceeeE
Q 012368 261 IYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT-GYLW-AHEHY----GI---FPDIM---TLAKPL-A-GGLPIGAA 326 (465)
Q Consensus 261 ~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~-g~~~-~~~~~----~~---~pdi~---t~sK~l-g-~G~~iG~v 326 (465)
.+++++.+++|.++|++||++||+||+|..+.+. +..+ .+... +. ...++ +|||.+ + .|+|+||+
T Consensus 286 -~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~ 364 (534)
T PLN02231 286 -QVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYM 364 (534)
T ss_pred -cCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEE
Confidence 4569999999999999999999999999987543 2211 11110 11 11233 789987 4 49999999
Q ss_pred Ee---CHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhc--Cc---hHHH---HHHHHHHHHHHHHHHHHHcCCCceee
Q 012368 327 LV---TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKIS--NP---AFLA---SVSKKGHYFKETLKQKLARNPHVKDV 395 (465)
Q Consensus 327 ~~---~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~--~~---~~~~---~~~~~~~~l~~~l~~~~~~~~~~~~~ 395 (465)
++ ++++++.+.... ..+.+.+.+++.++..+++.-. ++ .+.+ .+++..+..++.+.+.+..++.+...
T Consensus 365 ~~~~~~~~l~~~l~k~~-~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~ 443 (534)
T PLN02231 365 EVTGFTSDVREQIYKVA-SVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCN 443 (534)
T ss_pred EEecCCHHHHHHHHHHH-hhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceec
Confidence 86 678888775432 2345567778888777774210 11 1111 12222333333444444455545555
Q ss_pred eccceEEEE-Eec--C------------ChHHHHHHHH-HCCceEeecCC------CCEEEEecCCCCcHHHHHHHHHHH
Q 012368 396 RGLGLIIGI-EFD--V------------SATPVVDACR-DSGLLVLTAGK------GNVVRLVPPLIISEQELDQAVEIL 453 (465)
Q Consensus 396 ~~~g~~~~i-~~~--~------------~~~~~~~~l~-~~Gv~v~~~~~------~~~lRi~~~~~~t~e~i~~~l~~l 453 (465)
++.|.|+.+ .+. . ....++..|+ +.||.+.|+.. ...+|+++ ..+++++++++++|
T Consensus 444 ~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~--~~~~e~l~eal~RL 521 (534)
T PLN02231 444 KAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTI--LPQEDKIPAIVSRL 521 (534)
T ss_pred CCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEe--CCCHHHHHHHHHHH
Confidence 555655544 332 1 1223556666 57999998741 13578764 57899999999999
Q ss_pred HHHHHHhhh
Q 012368 454 CKTLPVLDS 462 (465)
Q Consensus 454 ~~~l~~~~~ 462 (465)
.++++++.+
T Consensus 522 ~~~~~~~~~ 530 (534)
T PLN02231 522 TEFHKSFMD 530 (534)
T ss_pred HHHHHHHHH
Confidence 999887654
No 200
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.93 E-value=7.9e-23 Score=205.75 Aligned_cols=331 Identities=15% Similarity=0.146 Sum_probs=211.2
Q ss_pred CCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCC-------HHHHHHHHHHHhhcC---CCeEEecCCHHH
Q 012368 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYS-------IPQIELAKRLVACSF---ADRVFFSNTGTE 166 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~-------~~~~~la~~l~~~~~---~~~v~~~~sG~e 166 (465)
+..|+|..+. |..++.|.+++.+.+............ ....++++.++++++ .++|++++|+++
T Consensus 16 ~~iyld~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~ 89 (398)
T TIGR03392 16 GTVYLDSAAT------ALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTE 89 (398)
T ss_pred CeEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHH
Confidence 4578886653 446788999998887542111111111 224568888888887 368999999999
Q ss_pred HHHHHHHHHHH-HhhhcCCCCCCCCceEEEEcCCcccCccccc---cccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhc
Q 012368 167 ANEAAIKFARK-FQRHSNPDSKEPATEFVSFTNSFHGRTMGAL---ALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLI 242 (465)
Q Consensus 167 A~~~al~~a~~-~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l 242 (465)
++..++..... .. .++++||+.++.|++...... ...+.... ..+...+.. .|++++++++
T Consensus 90 ~l~~~~~~~~~~~~--------~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~---~v~~~~~~~----~~~~~l~~~i 154 (398)
T TIGR03392 90 SINLVAQSYARPRL--------QPGDEIIVSEAEHHANLIPWLMVAQQTGAKVV---KLPIGADLL----PDIRQLPELL 154 (398)
T ss_pred HHHHHHHHhhhccC--------CCCCEEEECCcchhHHHHHHHHHHHHcCcEEE---EEecCCCCC----cCHHHHHHHh
Confidence 99998886531 01 157899999999886432111 11111110 011111111 2789999999
Q ss_pred CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccCCCc
Q 012368 243 QPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGG 320 (465)
Q Consensus 243 ~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G 320 (465)
++ ++++|++..+++.+|.+.+ +++|.++|+++|+++|+|++|. +|.. ..+.....+|+.++| |.+|.
T Consensus 155 ~~-~t~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~gp- 223 (398)
T TIGR03392 155 TP-RTRILALGQMSNVTGGCPD----LARAITLAHQYGAVVVVDGAQG-VVHG----PPDVQALDIDFYAFSGHKLYGP- 223 (398)
T ss_pred cc-CceEEEEECccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCC----CCChhhcCCCEEEEecccccCC-
Confidence 75 4566666555556676665 8899999999999999999996 3222 112223347888888 97653
Q ss_pred cceeeEEeCHHHHhhccCCCCcC------------------CC---CChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 012368 321 LPIGAALVTEKVASAINYGDHGS------------------TF---AGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFK 379 (465)
Q Consensus 321 ~~iG~v~~~~~i~~~~~~~~~~~------------------t~---~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~ 379 (465)
.++|++++++++++.+.+...+. .| +.|..+..+..++++.+.+.++ +++++....++
T Consensus 224 ~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~-~~i~~~~~~l~ 302 (398)
T TIGR03392 224 TGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDI-AAAEAWSVSLA 302 (398)
T ss_pred CceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCH-HHHHHHHHHHH
Confidence 34899999999887775421110 01 2344566677777776644332 23444444455
Q ss_pred HHHHHHHHcCCCceee-eccceEEEEEec-CChHHHHHHHHHCCceEeecC-----------CCCEEEEecCCCCcHHHH
Q 012368 380 ETLKQKLARNPHVKDV-RGLGLIIGIEFD-VSATPVVDACRDSGLLVLTAG-----------KGNVVRLVPPLIISEQEL 446 (465)
Q Consensus 380 ~~l~~~~~~~~~~~~~-~~~g~~~~i~~~-~~~~~~~~~l~~~Gv~v~~~~-----------~~~~lRi~~~~~~t~e~i 446 (465)
+.+.+.+.+.+.+... ...+.++.+.++ ....++.+.|.++||.+.++. .++++|++++..+|++|+
T Consensus 303 ~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei 382 (398)
T TIGR03392 303 DLAEERLAQLPGFRSFRCPGSSLLAFDFAGVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDV 382 (398)
T ss_pred HHHHHHHhcCCCeEEeCCCCCcEEEEEeCCcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHH
Confidence 5555544455432222 123445666653 456789999999999998653 136899999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 012368 447 DQAVEILCKTLPVL 460 (465)
Q Consensus 447 ~~~l~~l~~~l~~~ 460 (465)
+++++.|+++++.+
T Consensus 383 ~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 383 DALVDAVGAALELL 396 (398)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988764
No 201
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.93 E-value=4.7e-24 Score=216.76 Aligned_cols=339 Identities=14% Similarity=0.068 Sum_probs=198.2
Q ss_pred EEecccCcccccCCCCCHH-HHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhh-c-C------CCeEEecCCHHHHHHH
Q 012368 100 YLDLSSGIAVNALGHGDAD-WIKAVVDQANVLTHVSNMYYSIPQIELAKRLVAC-S-F------ADRVFFSNTGTEANEA 170 (465)
Q Consensus 100 ylD~~~~~~~~~lGh~~p~-v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~-~-~------~~~v~~~~sG~eA~~~ 170 (465)
.+++..+.+ |...|+ |.+ +.+++....+....+..+.++++++++.+. + + .++|++|+|+++|+..
T Consensus 102 ~i~l~~g~p----~~~~~~~v~e-~~~~~~~~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~ 176 (527)
T PRK09275 102 AVSYVRDQL----GFDADEFVYE-LVDGIIGDNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCY 176 (527)
T ss_pred HHhhcCCCC----CCCCCHHHHH-HHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHH
Confidence 455555433 444444 555 555553222222222334466666644332 1 1 2389999999999999
Q ss_pred HHHHHHH--HhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeE
Q 012368 171 AIKFARK--FQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA 248 (465)
Q Consensus 171 al~~a~~--~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a 248 (465)
++.++.. .. +++|+|++++|+|..+...+...+...... + .+..++..+. .|+++++++++++..+
T Consensus 177 ~~~aL~~~~ll--------~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v-~-v~~~~~~~f~--~d~~~l~~~~~~~tka 244 (527)
T PRK09275 177 IFDSLKENGLL--------KAGDKIALMTPIFTPYLEIPELPRYDLEVV-H-INADEENEWQ--YPDSELEKLRDPSIKA 244 (527)
T ss_pred HHHHHhhhhcC--------CCCCEEEEeCCChHHHHHHHHHcCCCeEEE-E-eecCcccCCC--CCHHHHHhhcCCCCCE
Confidence 8885321 11 279999999999998875543322111100 0 0111111111 2789999988765556
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHH--hCCEEEEeccccCCCCCCcccccccc-CCcccEEEecccCCC-cccee
Q 012368 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDD--AGALLVFDEVQCGLGRTGYLWAHEHY-GIFPDIMTLAKPLAG-GLPIG 324 (465)
Q Consensus 249 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~--~g~llI~DEv~~g~gr~g~~~~~~~~-~~~pdi~t~sK~lg~-G~~iG 324 (465)
+++++|.||+| .+.+++.+++|.++|++ +|++||+||+|..|.. ......... +...-+-+|||.++. |||+|
T Consensus 245 i~l~nP~NPTG--~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~-~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG 321 (527)
T PRK09275 245 LFLVNPSNPPS--VAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD-DFRSLFAVLPYNTILVYSFSKYFGATGWRLG 321 (527)
T ss_pred EEEeCCcCCcC--CCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc-cccCHHHhCCCCEEEEeehhhhccCcHhHHh
Confidence 66778887776 34589999999999965 5999999999998742 111111111 122334479999984 99999
Q ss_pred eEEeCHH-----HHhhc--------------------------------cCCCCcCCCCChHHHHHH-H----HHHHHHh
Q 012368 325 AALVTEK-----VASAI--------------------------------NYGDHGSTFAGSPLVCNA-A----IAVLDKI 362 (465)
Q Consensus 325 ~v~~~~~-----i~~~~--------------------------------~~~~~~~t~~~~~~~~~a-a----~a~L~~~ 362 (465)
|++++++ +++.+ .......+.+.+.+.|.+ + .++|+
T Consensus 322 ~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~-- 399 (527)
T PRK09275 322 VIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLD-- 399 (527)
T ss_pred hhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHh--
Confidence 9999876 33322 111234556667677765 3 22333
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC------------------ChHHHHHHHHH-CCce
Q 012368 363 SNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV------------------SATPVVDACRD-SGLL 423 (465)
Q Consensus 363 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~------------------~~~~~~~~l~~-~Gv~ 423 (465)
..+.+.+..++..+..++.+.+.+ ..+.....+..+.++++++.. +..+++.+|++ .||.
T Consensus 400 ~~~~~~~~~~~~~~~Rr~~l~~~L-g~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~ 478 (527)
T PRK09275 400 EEDAYKKAMKDIIRRRYKALYEGL-GLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVV 478 (527)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHc-CCCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEE
Confidence 123444444444444344443332 122111123334555565521 34567777774 5999
Q ss_pred EeecCC----CCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 424 VLTAGK----GNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 424 v~~~~~----~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
+.|+.. .+++|+++. ..+++++.++.++|.+++.+..+
T Consensus 479 v~PG~~Fg~~~~~vRis~a-~~~~~~~~~~~~rl~~~l~~y~~ 520 (527)
T PRK09275 479 LLPGGGFGGPEWSVRVSLA-NLNEEDYAKIGKAIRKLLDEYYE 520 (527)
T ss_pred EeCchhhCCCCCeEEEEEe-cCCHHHHHHHHHHHHHHHHHHHH
Confidence 988742 357998653 25889999999999999987653
No 202
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.92 E-value=2.8e-23 Score=212.65 Aligned_cols=300 Identities=17% Similarity=0.103 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHhhcC------CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 140 IPQIELAKRLVACSF------ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 140 ~~~~~la~~l~~~~~------~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+.++++++++.+.++ +++|++|+|+++|++.+++++. +++|.|++.+|+|.++........+.
T Consensus 98 ~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~-----------~pGD~Vlv~~P~Y~~~~~~~~~~~G~ 166 (496)
T PLN02376 98 KFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLA-----------DPGDVFLIPSPYYAAFDRDLRWRTGV 166 (496)
T ss_pred HHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhC-----------CCCCEEEECCCCccchHHHHHhhCCC
Confidence 346677777765432 6899999999999999988665 27899999999999887544322222
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcC-----CCCe-EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEec
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQ-----PGKT-AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDE 287 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~-----~~~~-a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DE 287 (465)
.... .+......+ --|+++++++++ ..++ ++++++|.||+| .+++.+.+++|.++|++||++||+||
T Consensus 167 ~vv~---v~~~~~~~~--~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG--~~~s~e~l~~L~~~a~~~~i~lI~DE 239 (496)
T PLN02376 167 EIIP---VPCSSSDNF--KLTVDAADWAYKKAQESNKKVKGLILTNPSNPLG--TMLDKDTLTNLVRFVTRKNIHLVVDE 239 (496)
T ss_pred EEEE---EeCCCCccC--cCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCC--ccCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 1111 111110000 016777765532 1234 466677777665 45689999999999999999999999
Q ss_pred cccCCCCCCccc-cc-cc---cC---Cccc----EEEecccCC-CccceeeEEeC-HHHHhhccCCCCcCCCCChHHHHH
Q 012368 288 VQCGLGRTGYLW-AH-EH---YG---IFPD----IMTLAKPLA-GGLPIGAALVT-EKVASAINYGDHGSTFAGSPLVCN 353 (465)
Q Consensus 288 v~~g~gr~g~~~-~~-~~---~~---~~pd----i~t~sK~lg-~G~~iG~v~~~-~~i~~~~~~~~~~~t~~~~~~~~~ 353 (465)
+|..+.+.+..+ .. .. ++ ..++ +.+|||.+| .|+|+||++++ +.+.+.+... ......+.+++.
T Consensus 240 iY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~--~~~~~vs~~~Q~ 317 (496)
T PLN02376 240 IYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKM--SSFGLVSSQTQL 317 (496)
T ss_pred CccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHH--hhcCCCCHHHHH
Confidence 999864444221 11 11 11 1223 337999998 69999999985 5565554321 122236778888
Q ss_pred HHHHHHHHhcC-chHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC---------ChHHHHHHHHH-CCc
Q 012368 354 AAIAVLDKISN-PAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV---------SATPVVDACRD-SGL 422 (465)
Q Consensus 354 aa~a~L~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~---------~~~~~~~~l~~-~Gv 422 (465)
++.+.|+...- +.+.++.++..+..++.+.+.+.+.+.....+..|+|+|++++. ...++++.|++ .||
T Consensus 318 a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV 397 (496)
T PLN02376 318 MLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKL 397 (496)
T ss_pred HHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCE
Confidence 88777752111 22333334334444444444454444222223456889998831 12567787876 599
Q ss_pred eEeecCC-----CCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 423 LVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 423 ~v~~~~~-----~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
.+.|+.. .+++|+++.. .+++++++++++|.+++.+.
T Consensus 398 ~v~pGs~F~~~~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~~~ 439 (496)
T PLN02376 398 NVSPGSSFRCTEPGWFRICFAN-MDDDTLHVALGRIQDFVSKN 439 (496)
T ss_pred EEeCccccCCCCCCEEEEEeeC-CCHHHHHHHHHHHHHHHHHh
Confidence 9998631 3689997653 46899999999999998643
No 203
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.92 E-value=2.4e-23 Score=194.14 Aligned_cols=325 Identities=18% Similarity=0.165 Sum_probs=234.1
Q ss_pred CEEEecccCcccccCCC-CCHHHHHHHHHHHhhcccccC-----CCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHH
Q 012368 98 REYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVSN-----MYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAA 171 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~a 171 (465)
+++-=++||.+ ||- .||+|.+|+.+.+++.+.+.+ .+.+....+|++.|+++++.+..++++|..-||+..
T Consensus 171 k~VtVWCSNDY---Lgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDst 247 (570)
T KOG1360|consen 171 KKVTVWCSNDY---LGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEAALLFSSCFVANDST 247 (570)
T ss_pred CceEEEecCcc---ccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcceeeeeeeeeccchH
Confidence 34445677666 443 789999999999998544322 134555889999999999988888889999999887
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcC---CCCeE
Q 012368 172 IKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ---PGKTA 248 (465)
Q Consensus 172 l~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~---~~~~a 248 (465)
+-.+.+. -.+.+|..+...|.+....+..++.+. .++.+||+++|+++|+ +..++
T Consensus 248 LftLak~----------lpgcei~SD~gNHASMI~GIrns~v~K------------~IFrHND~~hL~~lL~~~~~svPK 305 (570)
T KOG1360|consen 248 LFTLAKK----------LPGCEIFSDEGNHASMIQGIRNSRVPK------------HIFRHNDLDHLEQLLQSSPKSVPK 305 (570)
T ss_pred HHHHHHH----------CCCcEEeccccchHHHHHHhhhcCCcc------------eeeccCCHHHHHHHHHhCCCCCCc
Confidence 7644322 245678888888888766555443322 3467899999999997 34568
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc--ccccccCC--cccEE--EecccCCCccc
Q 012368 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL--WAHEHYGI--FPDIM--TLAKPLAGGLP 322 (465)
Q Consensus 249 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~--~~~~~~~~--~pdi~--t~sK~lg~G~~ 322 (465)
+|-+|.+.++.|.+.| |++|.+++++||++-.+|||+. .|-.|.. +.-++.|+ +.||+ |++|+||. -
T Consensus 306 ivAFEtVhSM~Gavcp----leelcDvah~yGAiTFlDEVHA-VGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGc--V 378 (570)
T KOG1360|consen 306 IVAFETVHSMDGAVCP----LEELCDVAHKYGAITFLDEVHA-VGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGC--V 378 (570)
T ss_pred eEEEeeeeccCCCcCC----HHHHHHHHHHhCceeeeehhhh-hccccCCCCCccccCCcchhhhhcccchhhhccc--c
Confidence 8999999999999988 9999999999999999999987 4444542 23455565 56887 69999985 2
Q ss_pred eeeEEeCHHHHhhccCCC--CcCCCCChHHHHHHHHHHHHHhcCc---hHHHHHHHHHHHHHHHHHHHHHcCCCceeeec
Q 012368 323 IGAALVTEKVASAINYGD--HGSTFAGSPLVCNAAIAVLDKISNP---AFLASVSKKGHYFKETLKQKLARNPHVKDVRG 397 (465)
Q Consensus 323 iG~v~~~~~i~~~~~~~~--~~~t~~~~~~~~~aa~a~L~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 397 (465)
.||+.+...+++.++... +..|.+.+|..++.|+++.+++..+ .+...-+++..++++.|.++ .+|. ++.
T Consensus 379 GGYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~--GiPV---i~~ 453 (570)
T KOG1360|consen 379 GGYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL--GIPV---IPN 453 (570)
T ss_pred cceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc--CCcc---cCC
Confidence 278889999999887543 3345567899999999999988643 23333344555555555443 3343 233
Q ss_pred cceEEEEEec--CChHHHHHHHH-HCCceEeec-------CCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 398 LGLIIGIEFD--VSATPVVDACR-DSGLLVLTA-------GKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 398 ~g~~~~i~~~--~~~~~~~~~l~-~~Gv~v~~~-------~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
..-++-+.+. ..+.++++.|+ ++||++..- |. ..+||.|.-.||.+-++.+++.+..+..++
T Consensus 454 pSHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~-E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 454 PSHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGT-ERLRIAPTPHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred CcceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccc-eeeecCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 3444555542 23456677776 679998643 32 569999999999999999999999998875
No 204
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.92 E-value=4e-23 Score=207.99 Aligned_cols=316 Identities=18% Similarity=0.131 Sum_probs=200.3
Q ss_pred CcccccCCCCCHHHHHHHHHHHhhcccccCC-------CCCHHHHHHHHHHHhhcCCC--eEEecCCHHHHHHHHHHHHH
Q 012368 106 GIAVNALGHGDADWIKAVVDQANVLTHVSNM-------YYSIPQIELAKRLVACSFAD--RVFFSNTGTEANEAAIKFAR 176 (465)
Q Consensus 106 ~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~-------~~~~~~~~la~~l~~~~~~~--~v~~~~sG~eA~~~al~~a~ 176 (465)
+.+....||++|++++++.++. .....+.. +..+...++++++++.++.+ .+.++++|+++.+.++..++
T Consensus 24 ~l~~g~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~ 102 (398)
T cd00613 24 FLGSGTYKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAI 102 (398)
T ss_pred cccccccCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHH
Confidence 3344567999999988876665 22111111 12234678999999988743 78888877777777766665
Q ss_pred HHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC-----CCHHHHHhhcCCCCeEEEE
Q 012368 177 KFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-----GNIEATRKLIQPGKTAAVF 251 (465)
Q Consensus 177 ~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~a~vi 251 (465)
...+ +++.|++.++ +|+.........+... ...+..+|. .|++++++++.+ ++++|+
T Consensus 103 ~~~~--------~gd~Vl~~~~-~h~~~~~~~~~~~~~~--------g~~~~~v~~~~~~~~d~~~l~~~i~~-~t~~vi 164 (398)
T cd00613 103 RAYH--------KRNKVLVPDS-AHPTNPAVARTRGEPL--------GIEVVEVPSDEGGTVDLEALKEEVSE-EVAALM 164 (398)
T ss_pred hccc--------CCCEEEEcCc-cCcchHHHHHHhcccC--------CcEEEEeccCCCCCcCHHHHHHhcCC-CeEEEE
Confidence 3211 2677776665 6666655544332110 011222222 278999999965 578888
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEE--ecccCC----Cccceee
Q 012368 252 VEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMT--LAKPLA----GGLPIGA 325 (465)
Q Consensus 252 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t--~sK~lg----~G~~iG~ 325 (465)
+++.+ ++|.+. +++++|+++|++||+++|+|+++......+. ...+ .+|+++ ++|++. ||+++|+
T Consensus 165 v~~~~-~~G~~~---~~l~~i~~la~~~g~~livD~~~~~~~~~~~---~~~~--~~d~~~~s~~K~~~p~g~Ggp~~g~ 235 (398)
T cd00613 165 VQYPN-TLGVFE---DLIKEIADIAHSAGALVYVDGDNLNLTGLKP---PGEY--GADIVVGNLQKTGVPHGGGGPGAGF 235 (398)
T ss_pred EECCC-CCceec---chHHHHHHHHHhcCCEEEEEeccccccCCCC---hHHc--CCCEEEeeccccCCCCCCCCCceeE
Confidence 88765 456652 5679999999999999999998763211111 1122 367764 568762 3588999
Q ss_pred EEeCHHHHhhccCC-----------------------------CCcCCCCChHHHHHHHHHHHHHhcCc---hHHHHHHH
Q 012368 326 ALVTEKVASAINYG-----------------------------DHGSTFAGSPLVCNAAIAVLDKISNP---AFLASVSK 373 (465)
Q Consensus 326 v~~~~~i~~~~~~~-----------------------------~~~~t~~~~~~~~~aa~a~L~~~~~~---~~~~~~~~ 373 (465)
+++++++++.+.+. ....+++++++.+.++.++++.+.++ ++.+++++
T Consensus 236 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~ 315 (398)
T cd00613 236 FAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHL 315 (398)
T ss_pred EEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 99998887765221 11234566677777777777766443 34567777
Q ss_pred HHHHHHHHHHHHHHcCCCceeee-ccceEEEEEecC----ChHHHHHHHHHCCceEeecC--CCCEEEEecCCCCcHHHH
Q 012368 374 KGHYFKETLKQKLARNPHVKDVR-GLGLIIGIEFDV----SATPVVDACRDSGLLVLTAG--KGNVVRLVPPLIISEQEL 446 (465)
Q Consensus 374 ~~~~l~~~l~~~~~~~~~~~~~~-~~g~~~~i~~~~----~~~~~~~~l~~~Gv~v~~~~--~~~~lRi~~~~~~t~e~i 446 (465)
+.+++++.|+++ +...... .....+++.++. ...++++.|+++||++.... .++.+|++|++.+|++||
T Consensus 316 ~~~~l~~~L~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis~~~~~t~edi 391 (398)
T cd00613 316 NANYLAKRLKEV----GGVLPFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTETETKEEL 391 (398)
T ss_pred HHHHHHHHHHhc----CCcccCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccccccccCCCCeEEEEcCCCCCHHHH
Confidence 777777777664 2111111 111223444432 35679999999999876531 237899999999999999
Q ss_pred HHHHHHH
Q 012368 447 DQAVEIL 453 (465)
Q Consensus 447 ~~~l~~l 453 (465)
|++++.|
T Consensus 392 d~~~~~L 398 (398)
T cd00613 392 DALLEAL 398 (398)
T ss_pred HHHHHhC
Confidence 9998864
No 205
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.92 E-value=1.4e-23 Score=210.81 Aligned_cols=332 Identities=14% Similarity=0.088 Sum_probs=198.9
Q ss_pred EEEecccCcccccCCCCC--HHHHHHHHHHHhhcc---cccCCCCCHHHHHHHHHHHhhcC----CCeE--EecCCHHHH
Q 012368 99 EYLDLSSGIAVNALGHGD--ADWIKAVVDQANVLT---HVSNMYYSIPQIELAKRLVACSF----ADRV--FFSNTGTEA 167 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~--p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~~----~~~v--~~~~sG~eA 167 (465)
..|||..|.++.+-++.+ +.+.+++.+.++... +....+..+.++++++++.+..+ .++| ++|+|+++|
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~a 106 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGA 106 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHH
Confidence 458888876533333333 678888877664321 22222333446666666654432 5666 999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCC-C-CCceEeeCCCHHHHHhhcCC-
Q 012368 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPV-M-PGVNFVEYGNIEATRKLIQP- 244 (465)
Q Consensus 168 ~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~d~~~le~~l~~- 244 (465)
+.+++++.... +++|.|++.+|+|.++...+...+...... +. . .+.. .|++++++.++.
T Consensus 107 l~~~~~~l~~~---------~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v----~~~~~~~~~----~d~~~l~~~~~~~ 169 (396)
T PRK09257 107 LRVGADFLKRA---------FPDAKVWVSDPTWPNHRAIFEAAGLEVKTY----PYYDAATKG----LDFDAMLADLSQA 169 (396)
T ss_pred HHHHHHHHHHh---------CCCCeEEECCCCcccHHHHHHHcCCcEEEE----eccccccCc----cCHHHHHHHHHhC
Confidence 99998755321 168999999999999876655544332211 11 0 1111 278999888752
Q ss_pred CCeEEEE--EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCC-Cc-ccc---ccc-cCCcccEEEeccc
Q 012368 245 GKTAAVF--VEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT-GY-LWA---HEH-YGIFPDIMTLAKP 316 (465)
Q Consensus 245 ~~~a~vi--~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~-g~-~~~---~~~-~~~~pdi~t~sK~ 316 (465)
.....++ .+|.||+| ..++++.+++|.++|++||+++|+||+|.+|... +. ... +.. .+...-+.+|||.
T Consensus 170 ~~~~~~~i~~~p~NPTG--~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~ 247 (396)
T PRK09257 170 PAGDVVLLHGCCHNPTG--ADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKN 247 (396)
T ss_pred CCCCEEEEeCCCCCCCC--CCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCc
Confidence 1212333 34444444 4569999999999999999999999999988542 11 111 111 1123344589999
Q ss_pred CCC-ccceeeEEe---CHH----HHhhccCCCCcCCCCChHHHHHHHHHHHHHhc-C---chHHHHHHHHHHHHHHHHHH
Q 012368 317 LAG-GLPIGAALV---TEK----VASAINYGDHGSTFAGSPLVCNAAIAVLDKIS-N---PAFLASVSKKGHYFKETLKQ 384 (465)
Q Consensus 317 lg~-G~~iG~v~~---~~~----i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~-~---~~~~~~~~~~~~~l~~~l~~ 384 (465)
++. |+|+||+++ +++ ++..+.........+.+++++.++.+.|+... . +++.+++++..+..++.+.+
T Consensus 248 ~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~ 327 (396)
T PRK09257 248 FGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVE 327 (396)
T ss_pred CccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 996 999999973 333 33333221222334457788888777775321 0 22333344444444444444
Q ss_pred HHHcCC---Ccee-eeccceEEEEEecCChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 385 KLARNP---HVKD-VRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 385 ~~~~~~---~~~~-~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
.+.++. .+.. .+..|.++|+.+ +...+.+.+.++||.+.|. + ||+++ ..++++|++++++|.+++
T Consensus 328 ~L~~~~~~~~~~~~~p~gg~~~w~~l--~~~~~~~l~~~~~V~~~p~---~--ri~~~-~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 328 ALKAKGPSRDFDFIARQRGMFSYSGL--TPEQVDRLREEFGVYAVGS---G--RINVA-GLNESNIDYVAEAIAAVL 396 (396)
T ss_pred HHHhcCCCCCcccccccceEEEecCC--CHHHHHHHHHcCCEEEcCC---C--eEEEe-eCCHHHHHHHHHHHHhhC
Confidence 444432 1222 234467777765 3333344445779998773 2 77664 378999999999998753
No 206
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.92 E-value=2.3e-23 Score=210.95 Aligned_cols=296 Identities=17% Similarity=0.131 Sum_probs=188.0
Q ss_pred HHHHHHHHHHhhcC------CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCC
Q 012368 141 PQIELAKRLVACSF------ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE 214 (465)
Q Consensus 141 ~~~~la~~l~~~~~------~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~ 214 (465)
.+.++++.+.+.++ +++|++|+|+++|+++++.++. +++|.|++.+|.|+++........+..
T Consensus 100 LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~-----------~pGD~Vlv~~P~Y~~f~~~~~~~~g~~ 168 (447)
T PLN02607 100 FRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILA-----------DPGDALLVPTPYYPGFDRDLRWRTGVK 168 (447)
T ss_pred HHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhC-----------CCCCEEEEcCCCCcchHHHHHhcCCcE
Confidence 35666666665432 6789999999999999877554 278999999999988875443222211
Q ss_pred CcCCCCCCCCCCceEeeCCCHHHHHhhcCC-----CCe-EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecc
Q 012368 215 HYRSPFEPVMPGVNFVEYGNIEATRKLIQP-----GKT-AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEV 288 (465)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-----~~~-a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 288 (465)
.... +......+. .|+++++++++. .++ ++++++|.||+| .+++++.+++|.++|++|+++||+||+
T Consensus 169 vv~v---~~~~~~~f~--~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG--~~~s~e~l~~l~~~~~~~~i~lI~DEi 241 (447)
T PLN02607 169 IVPI---HCDSSNNFQ--VTPQALEAAYQEAEAANIRVRGVLITNPSNPLG--ATVQRSVLEDILDFVVRKNIHLVSDEI 241 (447)
T ss_pred EEEE---eCCCCCCCc--CCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcC--cccCHHHHHHHHHHHHHCCCEEEEecc
Confidence 1110 111111110 278888888752 234 466677777665 456899999999999999999999999
Q ss_pred ccCCCCCCccc-cc-c---ccC---Cc---ccEEEecccCC-CccceeeEEe-CHHHHhhccCCCCcCCC-CChHHHHHH
Q 012368 289 QCGLGRTGYLW-AH-E---HYG---IF---PDIMTLAKPLA-GGLPIGAALV-TEKVASAINYGDHGSTF-AGSPLVCNA 354 (465)
Q Consensus 289 ~~g~gr~g~~~-~~-~---~~~---~~---pdi~t~sK~lg-~G~~iG~v~~-~~~i~~~~~~~~~~~t~-~~~~~~~~a 354 (465)
|.++-..+..+ .. . ..+ .. .-+.+|||.+| .|+|+||+++ ++++++.+... ..+ ..+.+++.+
T Consensus 242 Ya~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~---~~~~~~s~~~q~~ 318 (447)
T PLN02607 242 YSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM---SSFTLVSSQTQHL 318 (447)
T ss_pred ccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHH---hhcCCCCHHHHHH
Confidence 98743322211 11 1 111 11 12337899998 6999999998 66776665422 222 346677777
Q ss_pred HHHHHHHhcCchHH----HHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC--------ChHHHHHHHHH-CC
Q 012368 355 AIAVLDKISNPAFL----ASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV--------SATPVVDACRD-SG 421 (465)
Q Consensus 355 a~a~L~~~~~~~~~----~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~--------~~~~~~~~l~~-~G 421 (465)
+...|+ ++++. +..+++....++.+.+.++++++.......|+|+|+++.. ...++++.|++ +|
T Consensus 319 ~~~~L~---d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~g 395 (447)
T PLN02607 319 LASMLS---DEEFTENYIRTNRERLRKRYEMIVQGLRRAGIECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVK 395 (447)
T ss_pred HHHHhC---CchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCC
Confidence 777665 33332 2223322233333444444444322223457889998831 12367777775 69
Q ss_pred ceEeecCC-----CCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 422 LLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 422 v~v~~~~~-----~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
|.+.|+.. .+++|++++. .+++++++++++|.+++.+.+
T Consensus 396 V~v~pG~~f~~~~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~~~~ 439 (447)
T PLN02607 396 LNISPGSSCHCSEPGWFRVCFAN-MSEDTLEVALKRIHRFMDRRK 439 (447)
T ss_pred EEEcCccccCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHHH
Confidence 99988631 4789997653 478999999999999997654
No 207
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.92 E-value=3.2e-23 Score=204.62 Aligned_cols=291 Identities=18% Similarity=0.164 Sum_probs=192.7
Q ss_pred HHHHHHHHHHhhcC----CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCc
Q 012368 141 PQIELAKRLVACSF----ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHY 216 (465)
Q Consensus 141 ~~~~la~~l~~~~~----~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~ 216 (465)
.+..+++.+...++ .+.+++++||++|+..+++.+.. ++++|++.+++|+++...+...+.....
T Consensus 41 l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~-----------~g~~vl~~~~~~~~~~~~~~~~~~~~~~ 109 (350)
T cd00609 41 LREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLN-----------PGDEVLVPDPTYPGYEAAARLAGAEVVP 109 (350)
T ss_pred HHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCC-----------CCCEEEEcCCCchhHHHHHHHCCCEEEE
Confidence 35555555555433 56899999999999999987752 5789999999998776544333211110
Q ss_pred CCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCC
Q 012368 217 RSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTG 296 (465)
Q Consensus 217 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g 296 (465)
.+........ .+.+.++.... .++++|++++.+++.|.+ .+.+.+++|.++|+++|+++|+||+|+++...+
T Consensus 110 ----i~~~~~~~~~--~~~~~~~~~~~-~~~~~v~i~~~~~~tG~~-~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~ 181 (350)
T cd00609 110 ----VPLDEEGGFL--LDLELLEAAKT-PKTKLLYLNNPNNPTGAV-LSEEELEELAELAKKHGILIISDEAYAELVYDG 181 (350)
T ss_pred ----EecccccCCc--cCHHHHHhhcC-ccceEEEEECCCCCCCcc-cCHHHHHHHHHHHHhCCeEEEEecchhhceeCC
Confidence 0111111000 01245555554 467888888876666764 578889999999999999999999999876544
Q ss_pred ccc----cccccCCcccEEEecccCC-CccceeeEEeCH-HHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 012368 297 YLW----AHEHYGIFPDIMTLAKPLA-GGLPIGAALVTE-KVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLAS 370 (465)
Q Consensus 297 ~~~----~~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~-~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~ 370 (465)
... .....+....+.+++|.++ +|+++|++++++ ++++.+.......+++.++.++.++..+|+... +..++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~ 259 (350)
T cd00609 182 EPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGE--EHLEE 259 (350)
T ss_pred cccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcH--HHHHH
Confidence 322 1222233333447899999 789999999998 788888654445567788888888888888652 23333
Q ss_pred HHHHHHHHHHHHHHHHHcCCCce-eeeccceEEEEEecC--ChHHHHHHHHHCCceEeecC-----CCCEEEEecCCCCc
Q 012368 371 VSKKGHYFKETLKQKLARNPHVK-DVRGLGLIIGIEFDV--SATPVVDACRDSGLLVLTAG-----KGNVVRLVPPLIIS 442 (465)
Q Consensus 371 ~~~~~~~l~~~l~~~~~~~~~~~-~~~~~g~~~~i~~~~--~~~~~~~~l~~~Gv~v~~~~-----~~~~lRi~~~~~~t 442 (465)
+++.....++.+.+.+.+.+... .....|.++++.+.. ....+.+.|.++||.+.++. .+.++|++++..
T Consensus 260 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~-- 337 (350)
T cd00609 260 LRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP-- 337 (350)
T ss_pred HHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC--
Confidence 33333333444444444444322 345667888887743 34455666667799998763 237899998877
Q ss_pred HHHHHHHHHHHH
Q 012368 443 EQELDQAVEILC 454 (465)
Q Consensus 443 ~e~i~~~l~~l~ 454 (465)
++|+++++++|+
T Consensus 338 ~~~i~~~~~al~ 349 (350)
T cd00609 338 EEELEEALERLA 349 (350)
T ss_pred HHHHHHHHHHhh
Confidence 899999999886
No 208
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.92 E-value=3.4e-23 Score=206.04 Aligned_cols=281 Identities=13% Similarity=0.111 Sum_probs=182.9
Q ss_pred HHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCC
Q 012368 141 PQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPF 220 (465)
Q Consensus 141 ~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 220 (465)
...++.+.++++++.+.+++++||++++..++..+.. +++.|++..+.++.... .+...+.
T Consensus 52 ~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~~-----------~gd~Vl~~~~~h~s~~~-~~~~~g~------- 112 (370)
T TIGR02539 52 PIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALCK-----------EGDWVVLDGLAHYTSYV-AAERAGL------- 112 (370)
T ss_pred HHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhhC-----------CCCEEEECCcccHHHHH-HHHHcCC-------
Confidence 4667888899999988888999999999998886651 57888887777654432 2222221
Q ss_pred CCCCCCceEeeCC-------CHHHHHhhcCC------CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEec
Q 012368 221 EPVMPGVNFVEYG-------NIEATRKLIQP------GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDE 287 (465)
Q Consensus 221 ~~~~~~~~~~~~~-------d~~~le~~l~~------~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DE 287 (465)
.+..+|++ |+++|++++++ .++.+|+++.+++..|.+.+ +++|.++|++||+++|+||
T Consensus 113 -----~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~----l~~i~~la~~~~~~livDe 183 (370)
T TIGR02539 113 -----NVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD----AGKVAKVCREKGVPLLLNC 183 (370)
T ss_pred -----EEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC----HHHHHHHHHHcCCeEEEEC
Confidence 12223332 89999998852 24556666655566677665 8899999999999999999
Q ss_pred cccCCCCCCccccccccCCcccE--EEecccCCCccceeeEEeCHHHHhhccCCCCcCCC--------CChHHHHHHHHH
Q 012368 288 VQCGLGRTGYLWAHEHYGIFPDI--MTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTF--------AGSPLVCNAAIA 357 (465)
Q Consensus 288 v~~g~gr~g~~~~~~~~~~~pdi--~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~--------~~~~~~~~aa~a 357 (465)
+|. +|..+.. ...++ +|+ .+++|++++|.|+|++++++++++.+........+ .....++.++.+
T Consensus 184 a~~-~g~~~~~--~~~~~--~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (370)
T TIGR02539 184 AYT-VGRMPVS--AKEIG--ADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMA 258 (370)
T ss_pred ccc-cCCcCCC--HHHcC--CCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHH
Confidence 997 3332211 11122 454 47899999877899999999999988643211111 111225556666
Q ss_pred HHHHhcC-chHHHHHHHHHHHHHHHHHHHHHcCCCc--eeeeccceEEEEEecC----------ChHHHHHHHHHCCce-
Q 012368 358 VLDKISN-PAFLASVSKKGHYFKETLKQKLARNPHV--KDVRGLGLIIGIEFDV----------SATPVVDACRDSGLL- 423 (465)
Q Consensus 358 ~L~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~~~~~~g~~~~i~~~~----------~~~~~~~~l~~~Gv~- 423 (465)
+++...+ -+...+..++.+++++.|+++ +.. ...++...++.++++. ....+.+.|+++||+
T Consensus 259 al~~~~~~l~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ 334 (370)
T TIGR02539 259 SFPHVVERVKRWDEEVKKTRWFVAELEDI----GFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHG 334 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCcc
Confidence 6654211 111222233344566666553 321 1123456677666531 234688999999997
Q ss_pred EeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 424 VLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 424 v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
+.++. ++++|+++ ..++++|+++++++|+++++++
T Consensus 335 ir~~~-~~~iRis~-~~~t~e~i~~l~~~L~~~~~~~ 369 (370)
T TIGR02539 335 IRSGQ-TKYFKLSV-YGLTKEQVEYVVDSFEEIVEEY 369 (370)
T ss_pred ccCCc-ceEEEEEe-cCCCHHHHHHHHHHHHHHHHhc
Confidence 66543 36899997 3689999999999999887653
No 209
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.92 E-value=9.4e-23 Score=203.37 Aligned_cols=316 Identities=17% Similarity=0.124 Sum_probs=202.9
Q ss_pred CCCHHHHHHHHHHHhhcccccCCCCCHH--HHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 012368 114 HGDADWIKAVVDQANVLTHVSNMYYSIP--QIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEP 189 (465)
Q Consensus 114 h~~p~v~~a~~~~~~~~~~~~~~~~~~~--~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~ 189 (465)
|++|.+++++.+++......+..++... ..+++++|++.++ .+.+++++||++|+..+++.++.... .+
T Consensus 31 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~-------~~ 103 (371)
T PRK13520 31 EPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAK-------AE 103 (371)
T ss_pred CchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhcc-------CC
Confidence 5889999999998875322222222222 4788999999888 34689999999999999998764311 13
Q ss_pred CceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 012368 190 ATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFL 269 (465)
Q Consensus 190 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l 269 (465)
+++|++.++++..+...+...+ ..... .+...+. ..|+++|+++++++...++++.+ ++++|.+.+ +
T Consensus 104 ~~~vl~~~~~h~s~~~~~~~~g-~~~~~---v~~~~~~----~~d~~~l~~~i~~~~~~vi~~~~-~~~tG~~~~----l 170 (371)
T PRK13520 104 KPNIVVPESAHFSFDKAADMLG-VELRR---APLDDDY----RVDVKAVEDLIDDNTIGIVGIAG-TTELGQVDP----I 170 (371)
T ss_pred CceEEecCcchHHHHHHHHHcC-ceEEE---ecCCCCC----cCCHHHHHHHHhhCCEEEEEEcC-CcCCcccCC----H
Confidence 6789988887755433221111 11100 0111111 12899999999754434444444 455677665 9
Q ss_pred HHHHHHHHHhCCEEEEeccccCCCC----CCccccccccCCcccEEEec--ccCCCccceeeEEe-CHHHHhhccCCC--
Q 012368 270 QFLRDACDDAGALLVFDEVQCGLGR----TGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALV-TEKVASAINYGD-- 340 (465)
Q Consensus 270 ~~l~~l~~~~g~llI~DEv~~g~gr----~g~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~-~~~i~~~~~~~~-- 340 (465)
++|.++|++||+++|+||+|+++.. .+..+.... ...|.+++| |...+|+|+|+++. ++++++.+....
T Consensus 171 ~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~--~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~~~~~~ 248 (371)
T PRK13520 171 PELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSL--PGVDSITIDPHKMGLAPIPAGGILFRDESYLDALAVDTPY 248 (371)
T ss_pred HHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccC--CCCceEEECCccccCccCCceEEEEcCHHHHHhhcccCcc
Confidence 9999999999999999999986521 111111111 234666543 65445789988876 555766653110
Q ss_pred --------CcCCCCChHHHHHHHHHHHHHhcCch---HHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCC
Q 012368 341 --------HGSTFAGSPLVCNAAIAVLDKISNPA---FLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVS 409 (465)
Q Consensus 341 --------~~~t~~~~~~~~~aa~a~L~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~ 409 (465)
..+|. ++..++++.++|+.+.+++ ..++..++.+++++.|+++ +..........++.+.++ +
T Consensus 249 ~~~~~~~~~~gt~--~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~v~~~~~-~ 321 (371)
T PRK13520 249 LTSKKQATLTGTR--SGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER----GFEPVIEPVLNIVAFDDP-N 321 (371)
T ss_pred ccCCCCcceEeec--cChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC----CCEEecCCCceEEEEecC-C
Confidence 01122 3345777778887764433 5566666666666666553 221122334556666664 5
Q ss_pred hHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 410 ATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 410 ~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
..++.+.|.++||.+.++..++++|++++..+|++|++++++.|+++++
T Consensus 322 ~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 322 PDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred HHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 6789999999999998765457899998888999999999999998764
No 210
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=2.4e-23 Score=206.63 Aligned_cols=295 Identities=16% Similarity=0.162 Sum_probs=190.1
Q ss_pred CCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCC-ceEEEEcCCcccCccccccccCC
Q 012368 137 YYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPA-TEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 137 ~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~-~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
|+++...+|++.++++++ .++|++++|+++++..+++++.. ++ +.|++.+|+|..+...+...+.
T Consensus 56 Y~~~~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~-----------~g~~~vlv~~p~y~~~~~~~~~~g~- 123 (364)
T PRK04781 56 YPDPQPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCV-----------PGRDAVLVTPPVFGMYAVCARLQNA- 123 (364)
T ss_pred CCCCCHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcC-----------CCCCeEEEcCCChHHHHHHHHHcCC-
Confidence 333335688888888886 77999999999999998886642 45 6899999988644432222221
Q ss_pred CCcCCCCCCCC-CCceEeeCCCHHHHHhhc-CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 012368 214 EHYRSPFEPVM-PGVNFVEYGNIEATRKLI-QPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG 291 (465)
Q Consensus 214 ~~~~~~~~~~~-~~~~~~~~~d~~~le~~l-~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g 291 (465)
.... .+.. .+..+ ..|++++++.+ .++...+++++|+|++| . ..+.+.+++|.+.|+ +++++|+||+|.+
T Consensus 124 ~~~~---v~~~~~~~~~--~~d~~~l~~~~~~~~~~lv~l~~p~NPTG-~-~~~~~~~~~l~~~~~-~~~~iI~Deay~~ 195 (364)
T PRK04781 124 PLVE---VPLVDGADGF--HADVPAIVAAALASNAKLVFLCSPSNPAG-S-AIALDQIERALQALQ-GKALVVVDEAYGE 195 (364)
T ss_pred EEEE---EecCCCccCC--CcCHHHHHHHHhccCCeEEEEcCCCCCCC-C-CcCHHHHHHHHHhCC-CCcEEEEeCcchh
Confidence 1111 1110 00000 02677775554 33334444556665554 3 457888888888886 4899999999998
Q ss_pred CCCCCccc-cccccCCcccEEEecccCC-CccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHH
Q 012368 292 LGRTGYLW-AHEHYGIFPDIMTLAKPLA-GGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLA 369 (465)
Q Consensus 292 ~gr~g~~~-~~~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~ 369 (465)
|....... ..+.++...-+.||||.+| .|+|+||+++++++++.+... ...++.+.+++.++.++|+....+.+.+
T Consensus 196 f~~~~~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~--~~~~~~~~~~~~~a~~~l~~~~~~~~~~ 273 (364)
T PRK04781 196 FSDVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRC--QAPYPVPTPCAALAEQALSAPALAVTAR 273 (364)
T ss_pred hcCCcchHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhc--cCCCCCCHHHHHHHHHHHhcccHHHHHH
Confidence 84321111 1122222333458999999 799999999999999988743 3457778888888888886321112222
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCc-eeeeccceEEEEEecCChHHHHHHHHHCCceEeecC----CCCEEEEecCCCCcHH
Q 012368 370 SVSKKGHYFKETLKQKLARNPHV-KDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAG----KGNVVRLVPPLIISEQ 444 (465)
Q Consensus 370 ~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~lRi~~~~~~t~e 444 (465)
.++ .....++.+.+.+..++.+ ...++.|+|+|++++ +..++.+.|.++||.+.++. .++++||++. +.+
T Consensus 274 ~~~-~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~-~~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~~---~~~ 348 (364)
T PRK04781 274 RVA-EVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD-DAEAAFQALLAAGVVVRDQRAAPRLSDALRITLG---TPE 348 (364)
T ss_pred HHH-HHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC-CHHHHHHHHHHCCeEEeeCCCCCCCCCeEEEeCC---CHH
Confidence 222 2233334444444455432 245667999999885 56788999999999998863 1468999754 688
Q ss_pred HHHHHHHHHHHHHH
Q 012368 445 ELDQAVEILCKTLP 458 (465)
Q Consensus 445 ~i~~~l~~l~~~l~ 458 (465)
++++++++|+++..
T Consensus 349 ~~~~l~~al~~~~~ 362 (364)
T PRK04781 349 QNDRVLAALQRTQA 362 (364)
T ss_pred HHHHHHHHHHHHHh
Confidence 89999999987543
No 211
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.92 E-value=1.7e-23 Score=212.37 Aligned_cols=342 Identities=14% Similarity=0.102 Sum_probs=197.2
Q ss_pred EEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHH-HHHHhhcC-----CC--eEEecCCHHHHHHHH
Q 012368 100 YLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELA-KRLVACSF-----AD--RVFFSNTGTEANEAA 171 (465)
Q Consensus 100 ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la-~~l~~~~~-----~~--~v~~~~sG~eA~~~a 171 (465)
.+++..+. .+..+|+++.++.+.+....+.......+..++++ +.+.+.++ .+ +|++|+|+++|+..+
T Consensus 96 ~i~l~~g~----p~~~~~~~~~~~~~~~~~~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~ 171 (521)
T TIGR03801 96 IISYVIDQ----LGFDPDAFLYEMCDGIIGDNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYI 171 (521)
T ss_pred HHhhcCCC----CCCCCCHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHH
Confidence 34555443 34456677777777653221111122223344444 34444322 33 899999999999998
Q ss_pred HHHHHH--HhhhcCCCCCCCCceEEEEcCCcccCcccccccc-CCCCcCCCCCCCCC-Cc-eEeeCCCHHHHHhhcCCCC
Q 012368 172 IKFARK--FQRHSNPDSKEPATEFVSFTNSFHGRTMGALALT-SKEHYRSPFEPVMP-GV-NFVEYGNIEATRKLIQPGK 246 (465)
Q Consensus 172 l~~a~~--~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~-~~~~~~~~~~~~~~-~~-~~~~~~d~~~le~~l~~~~ 246 (465)
+..+.. .. +++|+|++.+|+|..+...+...+ +......+..+... +. .+. -|+++++++++++.
T Consensus 172 ~~~l~~~~ll--------~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~--~d~~~l~~~~~~~~ 241 (521)
T TIGR03801 172 FDSLKANELL--------KKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQ--YPDKELEKLRDPSI 241 (521)
T ss_pred HHHHhHhhcC--------CCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCC--CCHHHHHHhcCCCC
Confidence 875321 12 268999999999988765433221 11111000000000 00 011 27889998887545
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh--CCEEEEeccccCCCCCCcccccccc-CCcccEEEecccCC-Cccc
Q 012368 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDA--GALLVFDEVQCGLGRTGYLWAHEHY-GIFPDIMTLAKPLA-GGLP 322 (465)
Q Consensus 247 ~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~--g~llI~DEv~~g~gr~g~~~~~~~~-~~~pdi~t~sK~lg-~G~~ 322 (465)
.++++++|.||+|. ..+++.+++|.++|++| |++||+||+|..|.. ......... +...-+.+|||.++ .|||
T Consensus 242 kai~l~nP~NPTG~--vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~-~~~sl~~~~~~~vI~v~SfSK~fg~~G~R 318 (521)
T TIGR03801 242 KALFVVNPSNPPSV--AMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD-DFRSLFAELPYNTIGVYSFSKYFGATGWR 318 (521)
T ss_pred cEEEEeCCCCCCCC--CCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc-cccchhhhCCCCEEEEEcchhhccCchhh
Confidence 56666888877764 45899999999999987 999999999988742 111111111 12223447999998 5999
Q ss_pred eeeEEeCHH-----HH--------hhcc------------------------CCCCcCCCCChHHHHH--H---HHHHHH
Q 012368 323 IGAALVTEK-----VA--------SAIN------------------------YGDHGSTFAGSPLVCN--A---AIAVLD 360 (465)
Q Consensus 323 iG~v~~~~~-----i~--------~~~~------------------------~~~~~~t~~~~~~~~~--a---a~a~L~ 360 (465)
+||++++++ ++ +.+. ......+.+.+.+.|. | +.+.++
T Consensus 319 lG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~ 398 (521)
T TIGR03801 319 LGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMD 398 (521)
T ss_pred hhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhc
Confidence 999999754 22 1111 0112234555555554 2 333333
Q ss_pred HhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC------------------ChHHHHHHHH-HCC
Q 012368 361 KISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV------------------SATPVVDACR-DSG 421 (465)
Q Consensus 361 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~------------------~~~~~~~~l~-~~G 421 (465)
. .+.+.+..++..+..++.+.+.+ ..+.....+..|.++++++.. +..+++.+|+ +.|
T Consensus 399 ~--~~~y~~~~~~~~~~R~~~l~~~L-g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~g 475 (521)
T TIGR03801 399 K--ENAYKAETKDICRRREKLLFRGL-GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETG 475 (521)
T ss_pred c--chhHHHHHHHHHHHHHHHHHHhc-CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCC
Confidence 1 23444444444444344443333 222111223335666666631 3456777777 569
Q ss_pred ceEeecCC----CCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 422 LLVLTAGK----GNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 422 v~v~~~~~----~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
|.+.|+.. ...+|+++. ..+++++.++.++|.+++.+..+
T Consensus 476 V~v~PG~~Fg~~~~~vRisla-~l~~~~~~~~~~rl~~~~~~~~~ 519 (521)
T TIGR03801 476 IVLLPGGGFGGPEWSVRVSLA-NLNEYDYAEIGRAIRKILDEYYE 519 (521)
T ss_pred EEEeCchhcCCCCCeEEEEec-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99998742 356888763 36889999999999999987654
No 212
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.6e-23 Score=207.34 Aligned_cols=315 Identities=16% Similarity=0.167 Sum_probs=197.6
Q ss_pred CCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHH
Q 012368 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKF 174 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~ 174 (465)
+...+|+..|-. ++|. ++.+ .... ...|+.....+|.+.++++++ .++|++|+|+++++..++++
T Consensus 30 ~~~~~~l~~ne~--~~~~-~~~~------~~~~----~~~Yp~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~ 96 (354)
T PRK04635 30 GRGDIWINANES--PFNN-EYKL------DLAR----LNRYPECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRA 96 (354)
T ss_pred CCCcEEeeCCCC--CCCC-Chhh------hhHH----hccCCCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHH
Confidence 345678877744 5552 2322 1111 133444446788889998887 78999999999999999886
Q ss_pred HHHHhhhcCCCCCCCC-ceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEc
Q 012368 175 ARKFQRHSNPDSKEPA-TEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVE 253 (465)
Q Consensus 175 a~~~t~~~~~~~~~~~-~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~e 253 (465)
... ++ +.|++.+|+|..+...+...+..... .+...+.. .|++.+++ + ++...+++++
T Consensus 97 ~~~-----------~g~d~vlv~~P~y~~y~~~~~~~g~~v~~----v~~~~~~~----~~~~~l~~-~-~~~~li~i~n 155 (354)
T PRK04635 97 FCE-----------PGQDSIACFGPTYGMYAISAETFNVGVKA----LPLTADYQ----LPLDYIEQ-L-DGAKLVFICN 155 (354)
T ss_pred hcC-----------CCCCeEEEcCCChHHHHHHHHHcCCEEEE----EecCCCCC----CCHHHHHh-c-cCCCEEEEeC
Confidence 542 45 88999999998765443322221110 11111111 26777763 3 3344556677
Q ss_pred ccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccc-cccCCcccEEEecccCC-CccceeeEEeCHH
Q 012368 254 PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAH-EHYGIFPDIMTLAKPLA-GGLPIGAALVTEK 331 (465)
Q Consensus 254 p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~-~~~~~~pdi~t~sK~lg-~G~~iG~v~~~~~ 331 (465)
|+|++|. ..+.+.+++|.+.|+ +++||+||+|..|......... ..+....-+.||||.+| .|+|+||++++++
T Consensus 156 P~NPTG~--~~~~~~l~~l~~~~~--~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~ 231 (354)
T PRK04635 156 PNNPTGT--VIDRADIEQLIEMTP--DAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEE 231 (354)
T ss_pred CCCCCCc--cCCHHHHHHHHHhCC--CcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHH
Confidence 7666653 347777888887776 4999999999887422111111 11111122447999998 6999999999999
Q ss_pred HHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCChH
Q 012368 332 VASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSAT 411 (465)
Q Consensus 332 i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~ 411 (465)
+++.+... ...++.+.+.+.++.++|+....+. .++..+.....++.+.+.+.+++.+...++.|.|+++.+. +..
T Consensus 232 ~~~~l~~~--~~~~~~~~~~~~~a~~~l~~~~~~~-~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~~~~~-~~~ 307 (354)
T PRK04635 232 LIEILMRV--IAPYPVPLPVSEIATQALSEAGLAR-MKFQVLDLNAQGARLQAALSMYGGAKVLEGNGNYVLAKFD-DVD 307 (354)
T ss_pred HHHHHHhh--cCCCCCCHHHHHHHHHHHhcccHHH-HHHHHHHHHHHHHHHHHHHHhCCCceECCCCCcEEEEECC-CHH
Confidence 99887642 2346667778888888775321111 2222222222233444444444533344566888888774 567
Q ss_pred HHHHHHHHCCceEeecCC---CCEEEEecCCCCcHHHHHHHHHHHHHH
Q 012368 412 PVVDACRDSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKT 456 (465)
Q Consensus 412 ~~~~~l~~~Gv~v~~~~~---~~~lRi~~~~~~t~e~i~~~l~~l~~~ 456 (465)
++.+.|.++||.+...+. ++++|+++ .+.+|+++++++|++.
T Consensus 308 ~~~~~l~~~gv~v~~~~~~~~~~~lRis~---~~~e~~~~l~~al~~~ 352 (354)
T PRK04635 308 AVFKALWDAGIVARAYKDPRLANCIRFSF---SNRAETDKLIGLIRNQ 352 (354)
T ss_pred HHHHHHHHCCEEEEECCCCCCCCeEEEEe---CCHHHHHHHHHHHHHh
Confidence 788889999999976531 46899985 3789999999998753
No 213
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.92 E-value=4.6e-22 Score=200.38 Aligned_cols=332 Identities=14% Similarity=0.130 Sum_probs=209.5
Q ss_pred CCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCC-------CHHHHHHHHHHHhhcC---CCeEEecCCHHH
Q 012368 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYY-------SIPQIELAKRLVACSF---ADRVFFSNTGTE 166 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~-------~~~~~~la~~l~~~~~---~~~v~~~~sG~e 166 (465)
+..|+|..+. |..++.|.+++.+.++.......... .....++++.++++++ .++|+|++|+++
T Consensus 19 ~~~yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~ 92 (401)
T PRK10874 19 AGVYLDSAAT------ALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTE 92 (401)
T ss_pred ceEEEeCCcc------cCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHH
Confidence 4578886653 44678899999888765321111111 2236678888888887 468999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCcccccc---ccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcC
Q 012368 167 ANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALA---LTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ 243 (465)
Q Consensus 167 A~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~ 243 (465)
++..+++.+..-. ..++++||+.++.|++....... ..+..... .+...+. ..|++++++.++
T Consensus 93 ~i~~~~~~~~~~~-------~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~---v~~~~~~----~~d~~~l~~~i~ 158 (401)
T PRK10874 93 SINLVAQSYARPR-------LQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVK---LPLGADR----LPDVDLLPELIT 158 (401)
T ss_pred HHHHHHHHhhhcc-------CCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEE---EecCCCC----cCCHHHHHHhcC
Confidence 9999888653100 01578999999998764322111 11111100 1111111 127899999997
Q ss_pred CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccCCCcc
Q 012368 244 PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGL 321 (465)
Q Consensus 244 ~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~ 321 (465)
+ ++++|++..+++.+|.+.+ +++|.++|+++|+++|+|++|. +|... .+.....+|+.++| |.+|. .
T Consensus 159 ~-~t~lv~i~~~~n~tG~~~~----~~~i~~l~~~~g~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~~gp-~ 227 (401)
T PRK10874 159 P-RTRILALGQMSNVTGGCPD----LARAITLAHQAGMVVMVDGAQG-AVHFP----ADVQALDIDFYAFSGHKLYGP-T 227 (401)
T ss_pred c-CcEEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEECCcc-ccccc----CCchhcCCCEEEEecccccCC-C
Confidence 5 4556665555556666665 8999999999999999999996 32221 12122346777655 96653 2
Q ss_pred ceeeEEeCHHHHhhccCCCCcC------------------CC---CChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Q 012368 322 PIGAALVTEKVASAINYGDHGS------------------TF---AGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKE 380 (465)
Q Consensus 322 ~iG~v~~~~~i~~~~~~~~~~~------------------t~---~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~ 380 (465)
.+|++++++++++.+.+...++ -| +.|..++.+..++++.+.+.+. +++.+....+++
T Consensus 228 G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~-~~~~~~~~~l~~ 306 (401)
T PRK10874 228 GIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDI-NQAESWSRSLAT 306 (401)
T ss_pred ccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCH-HHHHHHHHHHHH
Confidence 4699999999888765321100 01 2345566677777776543322 223444444444
Q ss_pred HHHHHHHcCCCceee-eccceEEEEEec-CChHHHHHHHHHCCceEeecC-----------CCCEEEEecCCCCcHHHHH
Q 012368 381 TLKQKLARNPHVKDV-RGLGLIIGIEFD-VSATPVVDACRDSGLLVLTAG-----------KGNVVRLVPPLIISEQELD 447 (465)
Q Consensus 381 ~l~~~~~~~~~~~~~-~~~g~~~~i~~~-~~~~~~~~~l~~~Gv~v~~~~-----------~~~~lRi~~~~~~t~e~i~ 447 (465)
.+.+.+.+++.+... ...+.++.+.++ ....++.+.|.++||.+.++. ..+++|++++..+|++|++
T Consensus 307 ~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid 386 (401)
T PRK10874 307 LAEDALAKLPGFRSFRCQDSSLLAFDFAGVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVD 386 (401)
T ss_pred HHHHHHhcCCCEEEeCCCCCcEEEEEECCcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHH
Confidence 444444455433322 233445666663 356788889999999998643 1368999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 012368 448 QAVEILCKTLPVL 460 (465)
Q Consensus 448 ~~l~~l~~~l~~~ 460 (465)
++++.|+++++.+
T Consensus 387 ~ll~al~~~~~~~ 399 (401)
T PRK10874 387 ALVNAVDRALELL 399 (401)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988764
No 214
>PRK07908 hypothetical protein; Provisional
Probab=99.92 E-value=1.8e-22 Score=199.45 Aligned_cols=315 Identities=17% Similarity=0.098 Sum_probs=197.0
Q ss_pred CCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCC-HHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHH
Q 012368 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYS-IPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIK 173 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~ 173 (465)
+..++||..|.. +++ .++.+++++.+.+..... |+. ....++++.++++++ +++|++|+|+++|+..+++
T Consensus 21 ~~~~~~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~----Y~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~ 93 (349)
T PRK07908 21 GPGLLDFAVNVR--HDT-PPEWLRERLAARLGDLAA----YPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR 93 (349)
T ss_pred CCCeEEecCCCC--CCC-CCHHHHHHHHHHhhHhhc----CCCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh
Confidence 567999988754 444 678899999988765322 222 235678888888776 7899999999999998777
Q ss_pred HHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEc
Q 012368 174 FARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVE 253 (465)
Q Consensus 174 ~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~e 253 (465)
+. + +++++..|+|.++...+...+. .... .+...+.. -|++++ +++...+++++
T Consensus 94 -l~------------~-~~viv~~P~y~~~~~~~~~~G~-~i~~---v~~~~~~~----~d~~~l----~~~~~~i~l~n 147 (349)
T PRK07908 94 -LR------------P-RRAAVVHPSFTEPEAALRAAGI-PVHR---VVLDPPFR----LDPAAV----PDDADLVVIGN 147 (349)
T ss_pred -cC------------C-CeEEEeCCCChHHHHHHHHcCC-EEEe---eccCcccC----cChhHh----ccCCCEEEEcC
Confidence 22 3 4677889999776643332221 1111 11111111 145543 22233455567
Q ss_pred ccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCC--cccEEEecccCC-CccceeeEEeCH
Q 012368 254 PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGI--FPDIMTLAKPLA-GGLPIGAALVTE 330 (465)
Q Consensus 254 p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~--~pdi~t~sK~lg-~G~~iG~v~~~~ 330 (465)
|.|++|. + .+.+ +|.++|+ ++.++|+||+|..| ..+........+. ..-+.+|||.++ .|+|+||+++++
T Consensus 148 p~NPTG~-~-~~~~---~l~~l~~-~~~~iIvDe~y~~~-~~~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~ 220 (349)
T PRK07908 148 PTNPTSV-L-HPAE---QLLALRR-PGRILVVDEAFADA-VPGEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAP 220 (349)
T ss_pred CCCCCCC-C-cCHH---HHHHHHh-cCCEEEEECcchhh-ccCCccccccccCCCEEEEeecccccCCccceeeeeecCH
Confidence 7766653 3 3544 5667775 47889999999876 2333211111111 122337899998 799999999999
Q ss_pred HHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCCh
Q 012368 331 KVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSA 410 (465)
Q Consensus 331 ~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~ 410 (465)
++++.+.... ..++.+++.++++.+.++. ....+++++++.....++.+.+.+.+++.....+..|.++|+.++. .
T Consensus 221 ~~~~~~~~~~--~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~~~~~~~~~-~ 296 (349)
T PRK07908 221 DVLARLTRGR--AHWPVGTLQLEAIAACCAP-RAVAEAAADAARLAADRAEMVAGLRAVGARVVDPAAAPFVLVRVPD-A 296 (349)
T ss_pred HHHHHHHhcC--CCCCccHHHHHHHHHHhcc-cchHHHHHHHHHHHHHHHHHHHHHHhCCcEeccCCCceEEEEECCc-H
Confidence 9998886432 2355666766665555541 1122334444444444444444444443222223568888888743 5
Q ss_pred HHHHHHHHHCCceEeecCC-----CCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 411 TPVVDACRDSGLLVLTAGK-----GNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 411 ~~~~~~l~~~Gv~v~~~~~-----~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
..+.+.|.++||.+.++.. .+++|+++ .+++++++++++|++++.
T Consensus 297 ~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~---~~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 297 ELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV---RPRAEVPVLVQALAEILK 346 (349)
T ss_pred HHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe---CCCccHHHHHHHHHHHHh
Confidence 6788888899999988631 36899986 478899999999988764
No 215
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.92 E-value=1.4e-22 Score=193.90 Aligned_cols=334 Identities=18% Similarity=0.191 Sum_probs=220.6
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHhhc-ccccC--CCCC---HHHHHHHHHHHhhcC--CCeEEecCCHHHHHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVL-THVSN--MYYS---IPQIELAKRLVACSF--ADRVFFSNTGTEANEA 170 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~-~~~~~--~~~~---~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~ 170 (465)
.|+|.....+ -+|+|++++...+... ++-++ .+.. ...++.++.+++..+ +++|+||+||||++.+
T Consensus 3 iYlD~~ATTp------~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNl 76 (386)
T COG1104 3 IYLDNAATTP------VDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNL 76 (386)
T ss_pred ccccccccCC------CCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHH
Confidence 5899887655 5699999999988764 21111 1111 124556677788887 7799999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEE
Q 012368 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV 250 (465)
Q Consensus 171 al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~v 250 (465)
|++.+....... ..+.+|| .+..-|......+..-....+...+.+...+... |+++|+++|++ ++.+|
T Consensus 77 aI~g~~~a~~~~-----~~~~HII-ts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v----~~e~L~~al~~-~T~LV 145 (386)
T COG1104 77 AIKGAALAYRNA-----QKGKHII-TSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLV----DLEQLEEALRP-DTILV 145 (386)
T ss_pred HHHhhHHhhhcc-----cCCCeEE-EcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeE----cHHHHHHhcCC-CceEE
Confidence 999754322110 0244444 5556665554443321111222222222222222 89999999986 58899
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecc-cCCCccceeeEEeC
Q 012368 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAK-PLAGGLPIGAALVT 329 (465)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK-~lg~G~~iG~v~~~ 329 (465)
.+..+|++.|++.| +++|.++|+++++++++|-||. +|+. ..+......|+++||- .++|.-.+|+++.+
T Consensus 146 Sim~aNnE~G~IQp----I~ei~~i~k~~~i~fHvDAvQa-~Gki----pi~~~~~~vD~ls~SaHK~~GpkGiGaLyv~ 216 (386)
T COG1104 146 SIMHANNETGTIQP----IAEIGEICKERGILFHVDAVQA-VGKI----PIDLEELGVDLLSFSAHKFGGPKGIGALYVR 216 (386)
T ss_pred EEEecccCeeeccc----HHHHHHHHHHcCCeEEEehhhh-cCce----eccccccCcceEEeehhhccCCCceEEEEEC
Confidence 99999999999998 9999999999999999999997 6554 3333444579999983 35554678999887
Q ss_pred HHHHhhccCCC---------CcCCCCChHHHHHHHHHHHHHhc--CchHHHHHHHHHHHHHHHHHHHHHcCCCcee-eec
Q 012368 330 EKVASAINYGD---------HGSTFAGSPLVCNAAIAVLDKIS--NPAFLASVSKKGHYFKETLKQKLARNPHVKD-VRG 397 (465)
Q Consensus 330 ~~i~~~~~~~~---------~~~t~~~~~~~~~aa~a~L~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~ 397 (465)
+.+. +.+.. ..+|- |..+.++..+++++.. .+...+++..++++|.+.|.+.....-.... ...
T Consensus 217 ~~~~--~~p~i~GGgQE~g~RsGTe--nv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~r 292 (386)
T COG1104 217 PGVR--LEPLIHGGGQERGLRSGTE--NVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPR 292 (386)
T ss_pred CCCc--cCceeccCcCCCCCCCCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccC
Confidence 6543 22222 22333 4555555556666542 2455667777777777777654211101111 233
Q ss_pred cceEEEEEe-cCChHHHHHHHHHCCceEeecC-----------------C-----CCEEEEecCCCCcHHHHHHHHHHHH
Q 012368 398 LGLIIGIEF-DVSATPVVDACRDSGLLVLTAG-----------------K-----GNVVRLVPPLIISEQELDQAVEILC 454 (465)
Q Consensus 398 ~g~~~~i~~-~~~~~~~~~~l~~~Gv~v~~~~-----------------~-----~~~lRi~~~~~~t~e~i~~~l~~l~ 454 (465)
....+.+.| ..+.+.+...|-.+||.++.+. . ...+||+++...|++|++.+++.+.
T Consensus 293 lP~~~~~~f~gv~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~ 372 (386)
T COG1104 293 LPNILNFSFPGVEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALK 372 (386)
T ss_pred CCCeEEEEeCCCcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHH
Confidence 455566666 4567778888888899987541 0 2569999999999999999999999
Q ss_pred HHHHHhhh
Q 012368 455 KTLPVLDS 462 (465)
Q Consensus 455 ~~l~~~~~ 462 (465)
+++++++.
T Consensus 373 ~~i~~lr~ 380 (386)
T COG1104 373 EIIKRLRE 380 (386)
T ss_pred HHHHHHhh
Confidence 99998865
No 216
>PRK10534 L-threonine aldolase; Provisional
Probab=99.91 E-value=4.7e-23 Score=202.40 Aligned_cols=317 Identities=17% Similarity=0.149 Sum_probs=202.3
Q ss_pred EEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHh
Q 012368 100 YLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQ 179 (465)
Q Consensus 100 ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t 179 (465)
+|||.++.. -| .+|.+++|+.+..... ..+++.+...+|++.|+++++.+.+++++||++++.+++.+..
T Consensus 1 ~~~~~~~~~---~~-p~~~~~~a~~~~~~~~---~~Y~~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~--- 70 (333)
T PRK10534 1 MIDLRSDTV---TR-PSRAMLEAMMAAPVGD---DVYGDDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHC--- 70 (333)
T ss_pred CcccccccC---CC-CCHHHHHHHHhccCCC---cccCCCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhc---
Confidence 478888755 24 7899999987754331 1223677789999999999998777899999999888887543
Q ss_pred hhcCCCCCCCCceEEEEcCCccc-Cccc-cccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCC-----CeEEEEE
Q 012368 180 RHSNPDSKEPATEFVSFTNSFHG-RTMG-ALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPG-----KTAAVFV 252 (465)
Q Consensus 180 ~~~~~~~~~~~~~ii~~~~~yhg-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-----~~a~vi~ 252 (465)
.++++|++..|+|.. +... ....++..... .+...+. ..|+++|++++.++ ++++|++
T Consensus 71 --------~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----~~d~~~l~~~i~~~~~~~~~~~lv~l 135 (333)
T PRK10534 71 --------ERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQP---IDAAADG----TLPLDKVAAKIKPDDIHFARTRLLSL 135 (333)
T ss_pred --------CCCCeeEEechhhhhHhcCCchHHhcCceEEe---ecCCCCC----CCCHHHHHHhhcccCcCcccceEEEE
Confidence 157888887776632 2111 11111100000 0111111 12789999988642 3555555
Q ss_pred cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCC---CccccccccCCcc-cEEEecccCCCcccee-eEE
Q 012368 253 EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT---GYLWAHEHYGIFP-DIMTLAKPLAGGLPIG-AAL 327 (465)
Q Consensus 253 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~---g~~~~~~~~~~~p-di~t~sK~lg~G~~iG-~v~ 327 (465)
+ ++++ |.+ .+.+.+++|.++|++|+++||+||+|. |+.. +... .......+ -+++|||+++. ++| +++
T Consensus 136 ~-np~~-G~v-~~~~~l~~i~~~~~~~~~~lvvDEA~~-~~~~~~~~~~~-~~~~~~~~~~~~s~SK~~~~--~~G~~~~ 208 (333)
T PRK10534 136 E-NTHN-GKV-LPREYLKQAWEFTRERNLALHVDGARI-FNAVVAYGCEL-KEITQYCDSFTICLSKGLGT--PVGSLLV 208 (333)
T ss_pred e-cCCC-Cee-cCHHHHHHHHHHHHHcCCeEEeeHHHH-HHHHHHcCCCH-HHHHhcCCEEEEEeEcCCCC--cccceEE
Confidence 5 2333 554 478889999999999999999999976 4211 2111 00011111 24589998764 578 678
Q ss_pred eCHHHHhhccCCCC--cCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEE
Q 012368 328 VTEKVASAINYGDH--GSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIE 405 (465)
Q Consensus 328 ~~~~i~~~~~~~~~--~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~ 405 (465)
+++++++.+..... +..++.+.++++++.++|+.. .+.+++..+..+++.+.|.+ .+. ...++.++|+++.
T Consensus 209 ~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~r~~l~~~L~~----~g~-~~~~~~~nfv~~~ 281 (333)
T PRK10534 209 GNRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHN--VARLQEDHDNAAWLAEQLRE----AGA-DVMRQDTNMLFVR 281 (333)
T ss_pred cCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHh----CCC-ccCCCCceEEEEE
Confidence 89999888764322 122334456677777777632 23334444444555555554 332 2334468888888
Q ss_pred ec-CChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 406 FD-VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 406 ~~-~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
++ ....++.+.|.++||++.++ ..+|+...+.+|++++++++++|++++.
T Consensus 282 ~~~~~~~~~~~~l~~~gi~v~~~---~~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 282 VGEEQAAALGEYMRERNVLINAS---PIVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred CCchhHHHHHHHHHHcCeeecCC---ceEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 74 24567888899999999875 3478877767899999999999987663
No 217
>PRK08637 hypothetical protein; Provisional
Probab=99.91 E-value=1e-22 Score=204.05 Aligned_cols=295 Identities=14% Similarity=0.140 Sum_probs=188.5
Q ss_pred HHHHHHHHHHhhcC------CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCC
Q 012368 141 PQIELAKRLVACSF------ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE 214 (465)
Q Consensus 141 ~~~~la~~l~~~~~------~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~ 214 (465)
.+..+++++.+..+ .++|++|+|+++|+..+++++.. +++.|++.+|+|+.+........+..
T Consensus 49 lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~-----------~gd~Vlv~~P~y~~~~~~~~~~~g~~ 117 (388)
T PRK08637 49 LRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVD-----------QGDTVLLPDHNWGNYKLTFNTRRGAE 117 (388)
T ss_pred HHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcC-----------CCCEEEEcCCCCccHHHHHHHhcCCE
Confidence 35555555544332 25789999999999998886652 68999999999988875432222211
Q ss_pred CcCCCCCCCC-CCceEeeCCCHHHHHhhcC----CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHH-----hCCEEE
Q 012368 215 HYRSPFEPVM-PGVNFVEYGNIEATRKLIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDD-----AGALLV 284 (465)
Q Consensus 215 ~~~~~~~~~~-~~~~~~~~~d~~~le~~l~----~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~-----~g~llI 284 (465)
... .++. .+.. -|++++++.++ +.+...++++|.||+| ..++++.+++|.++|++ |+++||
T Consensus 118 vv~---v~~~~~~~~----~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG--~~~s~~~~~~l~~~~~~~~~~~~~~~iI 188 (388)
T PRK08637 118 IVT---YPIFDEDGG----FDTDALKEALQAAYNKGKVIVILNFPNNPTG--YTPTEKEATAIVEAIKELADAGTKVVAV 188 (388)
T ss_pred EEE---ecccCCCCc----CCHHHHHHHHHhhccCCCEEEEEeCCCCCCC--CCCCHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 111 1111 1111 17899988875 2223344445666665 55699999999999886 999999
Q ss_pred EeccccCCCCCCccc-c-c-cccCCccc---EE--EecccCC-CccceeeEEeC------HHHHhhccCC----CCcCCC
Q 012368 285 FDEVQCGLGRTGYLW-A-H-EHYGIFPD---IM--TLAKPLA-GGLPIGAALVT------EKVASAINYG----DHGSTF 345 (465)
Q Consensus 285 ~DEv~~g~gr~g~~~-~-~-~~~~~~pd---i~--t~sK~lg-~G~~iG~v~~~------~~i~~~~~~~----~~~~t~ 345 (465)
+||+|.+|-+.+... . . ...+...+ +. ++||.++ .|+|+||++.+ +++++.+... .....+
T Consensus 189 ~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 268 (388)
T PRK08637 189 VDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNIS 268 (388)
T ss_pred ecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccC
Confidence 999999885444311 1 1 11122222 22 6899877 59999999854 6777666421 112335
Q ss_pred CChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH---HHHHHHcCC---Cceeee-ccceEEEEEec-CChHHHHHHH
Q 012368 346 AGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKET---LKQKLARNP---HVKDVR-GLGLIIGIEFD-VSATPVVDAC 417 (465)
Q Consensus 346 ~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~---l~~~~~~~~---~~~~~~-~~g~~~~i~~~-~~~~~~~~~l 417 (465)
+.|.+++.++.++|+ ++.+.+++++....++++ +.+.+..++ .+...+ ..|.++|+.++ .+..++++.|
T Consensus 269 ~~s~~~q~a~~~~l~---~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~l~~~l 345 (388)
T PRK08637 269 NGPHPSQSAVLRALN---SPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKGVDAEELRVHL 345 (388)
T ss_pred CCCcHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCChHHHHHHHHHH
Confidence 678899999988885 344444444443333332 333343331 222233 44677888874 2457788988
Q ss_pred H-HCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 418 R-DSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 418 ~-~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
+ ++||.+.+.+. +++||+++. .+++++++++++|.++++.+
T Consensus 346 ~~~~gv~~~~~~~-~~iRi~~~~-~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 346 LEKYGIGTIALNE-TDLRIAFSC-VEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred hhhcceEEEeccC-CceEEEeec-CCHHHHHHHHHHHHHHHHhc
Confidence 6 57998876543 689998775 67899999999999998765
No 218
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.91 E-value=8.7e-23 Score=200.96 Aligned_cols=316 Identities=17% Similarity=0.150 Sum_probs=200.7
Q ss_pred ecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhh
Q 012368 102 DLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRH 181 (465)
Q Consensus 102 D~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~ 181 (465)
||++.. ++| .+|.+++++.+.+... ..+++.+...+++++++++++.++++++++|++|+..+++.+..
T Consensus 1 ~~~~~~---~~~-~~~~v~~a~~~~~~~~---~~~~~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~~---- 69 (338)
T cd06502 1 DFRSDT---VTG-PTPEMLEAMAAANVGD---DVYGEDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQ---- 69 (338)
T ss_pred Cccccc---CCC-CCHHHHHHHHhcccCC---cccCCCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhcC----
Confidence 566654 477 8899999998865321 12345666889999999999877899999999999998886641
Q ss_pred cCCCCCCCCceEEEEcCCcccCcccc--ccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCC------CCeEEEEEc
Q 012368 182 SNPDSKEPATEFVSFTNSFHGRTMGA--LALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP------GKTAAVFVE 253 (465)
Q Consensus 182 ~~~~~~~~~~~ii~~~~~yhg~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~------~~~a~vi~e 253 (465)
+++.|++.+++|....... ....+..... .+... ...|++++++++++ .++++|+++
T Consensus 70 -------~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~---v~~~~-----~~~d~~~l~~~i~~~~~~~~~~~~~v~l~ 134 (338)
T cd06502 70 -------PGGSVICHETAHIYTDEAGAPEFLSGVKLLP---VPGEN-----GKLTPEDLEAAIRPRDDIHFPPPSLVSLE 134 (338)
T ss_pred -------CCCeEEEecCcceeeecCCcHHHHcCceEEe---ecCCC-----CcCCHHHHHHHhhccCCCcCCcceEEEEE
Confidence 5788888777764332111 1111111111 11111 01388999999863 145555555
Q ss_pred ccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC--CCCccccccccCCcccEE--EecccCCCccceee-EEe
Q 012368 254 PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG--RTGYLWAHEHYGIFPDIM--TLAKPLAGGLPIGA-ALV 328 (465)
Q Consensus 254 p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g--r~g~~~~~~~~~~~pdi~--t~sK~lg~G~~iG~-v~~ 328 (465)
..++.||.. +.+.+++|.++|++||+++|+||+|..+. ..|. ........+|++ +++|+++. +.|+ +++
T Consensus 135 ~p~n~g~~~--~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~--~~~~~~~~~d~~~~s~sK~~~~--~~g~~~~~ 208 (338)
T cd06502 135 NTTEGGTVY--PLDELKAISALAKENGLPLHLDGARLANAAAALGV--ALKTYKSGVDSVSFCLSKGGGA--PVGAVVVG 208 (338)
T ss_pred eecCCcccc--CHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCC--CHHHHHhcCCEEEEeccccCCC--ccceEEEC
Confidence 443445433 77889999999999999999999874221 1121 111112234544 67899874 2344 457
Q ss_pred CHHHHhhccCC--CCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEe
Q 012368 329 TEKVASAINYG--DHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEF 406 (465)
Q Consensus 329 ~~~i~~~~~~~--~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~ 406 (465)
++++++.+... .++++++.+++.++++.++|+.-...+..+++.++.+++.+.|+++ +. ....+.+.++.+.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~-~~~~~~~~~~~v~~ 283 (338)
T cd06502 209 NRDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL----GG-LESEVQTNIVLLDP 283 (338)
T ss_pred CHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----CC-CcccccCCeEEEec
Confidence 88888877542 2234566677788888877763211234455666666666666543 32 12234566666665
Q ss_pred cCCh---HHHHHHHH---HCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHH
Q 012368 407 DVSA---TPVVDACR---DSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCK 455 (465)
Q Consensus 407 ~~~~---~~~~~~l~---~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~ 455 (465)
+... ..+.+.+. ++|+++.+.+. +++||++++.++++|++++++++++
T Consensus 284 ~~~~~~~~~l~~~l~~~~~~gi~~~~~~~-~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 284 VEANAVFVELSKEAIERRGEGVLFYAWGE-GGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred CCccHHHHHHHHHHHHhhhCCEEEEecCC-CeEEEEeecCCCHHHHHHHHHHHhc
Confidence 3211 23333443 68999988755 8899999999999999999998864
No 219
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.91 E-value=7.3e-22 Score=197.47 Aligned_cols=327 Identities=17% Similarity=0.163 Sum_probs=202.1
Q ss_pred EEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCC------CHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHH
Q 012368 100 YLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYY------SIPQIELAKRLVACSF--ADRVFFSNTGTEANEAA 171 (465)
Q Consensus 100 ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~------~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~a 171 (465)
|+|..+. +..++.|.+++.+.+........... .....++++++++.++ .++|+|++||++++..+
T Consensus 2 yld~aa~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~a 75 (379)
T TIGR03402 2 YLDNNAT------TRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTA 75 (379)
T ss_pred cCCCcCC------CCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHH
Confidence 6776654 33678999999988764211111111 1225677788898887 66899999999999999
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccc--cCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEE
Q 012368 172 IKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALAL--TSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAA 249 (465)
Q Consensus 172 l~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~ 249 (465)
++.+..... +++.|++....|++.......+ .+... ...+...+.. .|++++++++++ ++++
T Consensus 76 l~~~~~~~~--------~~~~vv~~~~~~~s~~~~~~~~~~~G~~v---~~v~~~~~g~----~~~~~l~~~i~~-~~~l 139 (379)
T TIGR03402 76 IKSALAAQP--------EKRHIITTAVEHPAVLSLCQHLEKQGYKV---TYLPVDEEGR----LDLEELRAAITD-DTAL 139 (379)
T ss_pred HHHHHHhcC--------CCCeEEEcccccHHHHHHHHHHHHcCCEE---EEEccCCCCc----CCHHHHHHhcCC-CcEE
Confidence 987653211 3566776666665543221111 11110 0111111111 278999999975 4667
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccCCCccceeeEE
Q 012368 250 VFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAAL 327 (465)
Q Consensus 250 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~ 327 (465)
+++...++.+|.+.+ +++|.++|++||+++|+|++|+ +|.. ..+.....+|++++| | +.|...+|+++
T Consensus 140 v~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~~~~-~g~~----~~~~~~~~~D~~~~s~~K-~~gp~G~g~l~ 209 (379)
T TIGR03402 140 VSVMWANNETGTIFP----IEEIGEIAKERGALFHTDAVQA-VGKI----PIDLKEMNIDMLSLSGHK-LHGPKGVGALY 209 (379)
T ss_pred EEEEcccCCeeeccc----HHHHHHHHHHcCCEEEEECccc-cccc----ccCcccCCCCEEEEcHHH-cCCCCceEEEE
Confidence 777666667777766 7899999999999999999997 4322 223334567999988 9 55545688888
Q ss_pred eCHHHHhhccCCCC-------cCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHc-CCCceeee---
Q 012368 328 VTEKVASAINYGDH-------GSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLAR-NPHVKDVR--- 396 (465)
Q Consensus 328 ~~~~i~~~~~~~~~-------~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~--- 396 (465)
.+++.. +.+... ......|..+..+..++++.+.+ ..+.+.+..+.+++.+.+.+.. .+.+....
T Consensus 210 v~~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~--~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~ 285 (379)
T TIGR03402 210 IRKGTR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATE--HLEEENTRVRALRDRLEAGLLARIPDARLNGDPT 285 (379)
T ss_pred ECCCCC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCc
Confidence 876542 222111 01123455666666677776532 2333334444444444443332 33221111
Q ss_pred -ccceEEEEEe-cCChHHHHHHHHHCCceEeecCC----------------------CCEEEEecCCCCcHHHHHHHHHH
Q 012368 397 -GLGLIIGIEF-DVSATPVVDACRDSGLLVLTAGK----------------------GNVVRLVPPLIISEQELDQAVEI 452 (465)
Q Consensus 397 -~~g~~~~i~~-~~~~~~~~~~l~~~Gv~v~~~~~----------------------~~~lRi~~~~~~t~e~i~~~l~~ 452 (465)
..+..+.+.+ ..+..++...|.++||.+.++.. .+.+|++++..+|++||+++++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~ 365 (379)
T TIGR03402 286 KRLPNTVNISFEYIEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEV 365 (379)
T ss_pred cCCCCEEEEEecCCCHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHH
Confidence 1122333333 34567888888889999875420 25799999999999999999999
Q ss_pred HHHHHHHhhh
Q 012368 453 LCKTLPVLDS 462 (465)
Q Consensus 453 l~~~l~~~~~ 462 (465)
|+++++++++
T Consensus 366 l~~~~~~~~~ 375 (379)
T TIGR03402 366 LPPIIARLRA 375 (379)
T ss_pred HHHHHHHHHh
Confidence 9999887653
No 220
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.91 E-value=8.1e-22 Score=196.80 Aligned_cols=313 Identities=18% Similarity=0.179 Sum_probs=201.3
Q ss_pred CCCCCHHHHHHHHHHHhhcccccCCCC-------CHHHHHHHHHHHhhcCC---CeEEecCCHHHHHHHHHHHHHHHhhh
Q 012368 112 LGHGDADWIKAVVDQANVLTHVSNMYY-------SIPQIELAKRLVACSFA---DRVFFSNTGTEANEAAIKFARKFQRH 181 (465)
Q Consensus 112 lGh~~p~v~~a~~~~~~~~~~~~~~~~-------~~~~~~la~~l~~~~~~---~~v~~~~sG~eA~~~al~~a~~~t~~ 181 (465)
.|..+|.+.+++.+.++.....+..+. .....++.+.+++.++. +.+++++|+++|+..+++.+.....
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~- 86 (373)
T cd06453 8 TSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANK- 86 (373)
T ss_pred ccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCC-
Confidence 455788999999988765322111111 12245677888888873 4899999999999999987653100
Q ss_pred cCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC-----CCHHHHHhhcCCCCeEEEEEcccC
Q 012368 182 SNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-----GNIEATRKLIQPGKTAAVFVEPIQ 256 (465)
Q Consensus 182 ~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~a~vi~ep~~ 256 (465)
++++|++.++.|.+.......... .....+..++. -|++++++.+.+ ++++|++..++
T Consensus 87 -------~g~~vl~~~~~~~~~~~~~~~~~~---------~~g~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~ 149 (373)
T cd06453 87 -------PGDEIVTSVMEHHSNIVPWQQLAE---------RTGAKLKVVPVDDDGQLDLEALEKLLTE-RTKLVAVTHVS 149 (373)
T ss_pred -------CCCEEEECcchhHHHHHHHHHHHh---------hcCcEEEEeecCCCCCcCHHHHHHHhcC-CceEEEEeCcc
Confidence 477899998887654221111000 00011122221 278999999975 56677666555
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccCCCccceeeEEeCHHHHh
Q 012368 257 GEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVAS 334 (465)
Q Consensus 257 ~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~ 334 (465)
+..|.+.+ +++|.++|++||++||+|++++ +|.. ........+|++++| |++++ .++|++++++++++
T Consensus 150 ~~tG~~~~----~~~i~~~~~~~~~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~~~-~g~g~~~~~~~~~~ 219 (373)
T cd06453 150 NVLGTINP----VKEIGEIAHEAGVPVLVDGAQS-AGHM----PVDVQDLGCDFLAFSGHKMLGP-TGIGVLYGKEELLE 219 (373)
T ss_pred cccCCcCC----HHHHHHHHHHcCCEEEEEhhhh-cCce----eeeccccCCCEEEeccccccCC-CCcEEEEEchHHhh
Confidence 55676655 8899999999999999999986 3222 112223457888888 99987 67899999999888
Q ss_pred hccCCCCcC------------------CC---CChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCce
Q 012368 335 AINYGDHGS------------------TF---AGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVK 393 (465)
Q Consensus 335 ~~~~~~~~~------------------t~---~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 393 (465)
.+.+...+. .| +.+..++.+..++++.+.+.++ +++.+....+.+.+.+.+.+.+.+.
T Consensus 220 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~-~~~~~~~~~~~~~l~~~l~~~~~~~ 298 (373)
T cd06453 220 EMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGM-EAIAAHEHELTAYALERLSEIPGVR 298 (373)
T ss_pred cCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 776422110 01 2344455566666776654433 3333444444445544444454322
Q ss_pred ee---eccceEEEEEec-CChHHHHHHHHHCCceEeecC-----------CCCEEEEecCCCCcHHHHHHHHHHH
Q 012368 394 DV---RGLGLIIGIEFD-VSATPVVDACRDSGLLVLTAG-----------KGNVVRLVPPLIISEQELDQAVEIL 453 (465)
Q Consensus 394 ~~---~~~g~~~~i~~~-~~~~~~~~~l~~~Gv~v~~~~-----------~~~~lRi~~~~~~t~e~i~~~l~~l 453 (465)
.+ ...+.++.+.+. .+..++.+.|.++||.+.++. .++.+|++++..+|++|+|++++.|
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 299 VYGDAEDRAGVVSFNLEGIHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred EeCCccccCCeEEEEECCcCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 22 234667777763 456789999999999986532 1368999999999999999999864
No 221
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.91 E-value=2.4e-21 Score=195.47 Aligned_cols=324 Identities=15% Similarity=0.070 Sum_probs=207.7
Q ss_pred CCEEEecccCcccccCCCCCHHHHHHHHHHHhhccccc-CCCC------CHHHHHHHHHHHhhcC---CCeEEecCCHHH
Q 012368 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS-NMYY------SIPQIELAKRLVACSF---ADRVFFSNTGTE 166 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~-~~~~------~~~~~~la~~l~~~~~---~~~v~~~~sG~e 166 (465)
+..|+|..+. |..++.|++++.+.+....... .... .....++++.+++.++ .++|+||+|+++
T Consensus 23 ~~iYld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 96 (406)
T PRK09295 23 PLAYLDSAAS------AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTE 96 (406)
T ss_pred ceEEEeCccc------ccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHH
Confidence 4578997764 3367889999998876422111 1111 1225678888888886 468999999999
Q ss_pred HHHHHHHHHHH-HhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC-----CCHHHHHh
Q 012368 167 ANEAAIKFARK-FQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-----GNIEATRK 240 (465)
Q Consensus 167 A~~~al~~a~~-~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~ 240 (465)
++..+++.... .. .++++||+.++.||+........... ....+..++. .|+++|++
T Consensus 97 ~l~~~~~~~~~~~~--------~~gd~vl~~~~~~~s~~~~~~~~~~~---------~g~~v~~v~~~~~~~~d~~~l~~ 159 (406)
T PRK09295 97 GINLVANSWGNSNV--------RAGDNIIISEMEHHANIVPWQMLCAR---------VGAELRVIPLNPDGTLQLETLPA 159 (406)
T ss_pred HHHHHHHHhhhhcC--------CCcCEEEECcchhhHHHHHHHHHHHH---------cCcEEEEEecCCCCCCCHHHHHH
Confidence 99988875421 11 15789999998887653222111000 0011112221 27899999
Q ss_pred hcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccCC
Q 012368 241 LIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLA 318 (465)
Q Consensus 241 ~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg 318 (465)
++++ ++++|++..+++..|.+.+ +++|.++|+++|+++|+|++|+ +|.. ..... ...+|++++| |.+|
T Consensus 160 ~i~~-~t~lv~l~~~~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~--~~~~~--~~~~D~~~~s~~K~~g 229 (406)
T PRK09295 160 LFDE-RTRLLAITHVSNVLGTENP----LAEMIALAHQHGAKVLVDGAQA-VMHH--PVDVQ--ALDCDFYVFSGHKLYG 229 (406)
T ss_pred hcCC-CcEEEEEecchhcccccCC----HHHHHHHHHHcCCEEEEEcccc-cCcc--ccCch--hcCCCEEEeehhhccC
Confidence 9975 4566666666666777766 8999999999999999999996 4332 11222 3346777665 9655
Q ss_pred CccceeeEEeCHHHHhhccCCCCc----------------------CCCCChHHHHHHHHHHHHHhcCc---hHHHHHHH
Q 012368 319 GGLPIGAALVTEKVASAINYGDHG----------------------STFAGSPLVCNAAIAVLDKISNP---AFLASVSK 373 (465)
Q Consensus 319 ~G~~iG~v~~~~~i~~~~~~~~~~----------------------~t~~~~~~~~~aa~a~L~~~~~~---~~~~~~~~ 373 (465)
. ..+|++++++++++.+.+...+ .+-+.|..++.+..++++.+.+. ...++.++
T Consensus 230 p-~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~ 308 (406)
T PRK09295 230 P-TGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQN 308 (406)
T ss_pred C-CCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 3 3479999999887765432110 01135667778888888876542 33444444
Q ss_pred HHHHHHHHHHHHHHcCCCceeee--ccceEEEEEec-CChHHHHHHHHHCCceEeecC-----------CCCEEEEecCC
Q 012368 374 KGHYFKETLKQKLARNPHVKDVR--GLGLIIGIEFD-VSATPVVDACRDSGLLVLTAG-----------KGNVVRLVPPL 439 (465)
Q Consensus 374 ~~~~l~~~l~~~~~~~~~~~~~~--~~g~~~~i~~~-~~~~~~~~~l~~~Gv~v~~~~-----------~~~~lRi~~~~ 439 (465)
+.+++++.| .+.+.+.... ..+.++.+.++ ....++.+.|.++||.+..+. .++.+|++++.
T Consensus 309 l~~~l~~~l----~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ 384 (406)
T PRK09295 309 LMHYALSQL----ESVPDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAM 384 (406)
T ss_pred HHHHHHHHH----hcCCCEEEeCCCCCceEEEEEECCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccC
Confidence 555554444 3444222111 12445666653 456778888889999987542 12579999999
Q ss_pred CCcHHHHHHHHHHHHHHHH
Q 012368 440 IISEQELDQAVEILCKTLP 458 (465)
Q Consensus 440 ~~t~e~i~~~l~~l~~~l~ 458 (465)
..|++|+|.+++.|+++..
T Consensus 385 ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 385 YNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 9999999999999988653
No 222
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.90 E-value=3.7e-21 Score=193.67 Aligned_cols=324 Identities=16% Similarity=0.128 Sum_probs=201.1
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhccccc-CCCCC-----HHHHHHHHHHHhhcC--CCeEEecCCHHHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS-NMYYS-----IPQIELAKRLVACSF--ADRVFFSNTGTEANE 169 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~-~~~~~-----~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~ 169 (465)
..|+|..+. |..++.+++++.+.+......+ ..+.. +..+++++.++++++ .+.|++++|+++++.
T Consensus 18 ~~yl~~~~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~ 91 (397)
T TIGR01976 18 RVFFDNPAG------TQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTF 91 (397)
T ss_pred eEEecCCcc------CCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHH
Confidence 478886543 4477899999999886532111 11211 235788899999887 457999999999988
Q ss_pred HHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccc---cccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCC
Q 012368 170 AAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGAL---ALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGK 246 (465)
Q Consensus 170 ~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~ 246 (465)
.+++......+ ++++|++.++.|++...... ...+..... .+...+.. ..|++++++++++ +
T Consensus 92 ~~~~~~~~~~~--------~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~---~~~~~~~~---~~~~~~l~~~i~~-~ 156 (397)
T TIGR01976 92 LLSRAISRRWG--------PGDEVIVTRLDHEANISPWLQAAERAGAKVKW---ARVDEATG---ELHPDDLASLLSP-R 156 (397)
T ss_pred HHHHHHHhcCC--------CCCEEEEcCCchHhHHHHHHHHHHhcCCEEEE---EeccccCC---CcCHHHHHHhcCC-C
Confidence 77775532221 57899999988766532211 111111100 11111000 1278999999975 4
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEE--EecccCCCcccee
Q 012368 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAGGLPIG 324 (465)
Q Consensus 247 ~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~--t~sK~lg~G~~iG 324 (465)
+.+|+++.+++..|.+.+ +++|.++|++||+++|+||++. .|. + ..... ...+|++ +++|++ |.++|
T Consensus 157 ~~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~-~-~~~~~--~~~~d~~~~s~~K~~--g~~~G 225 (397)
T TIGR01976 157 TRLVAVTAASNTLGSIVD----LAAITELVHAAGALVVVDAVHY-APH-G-LIDVQ--ATGADFLTCSAYKFF--GPHMG 225 (397)
T ss_pred ceEEEEeCCCCCCCccCC----HHHHHHHHHHcCCEEEEehhhh-ccc-c-CCCHH--HcCCCEEEEechhhc--CCceE
Confidence 566666655566666665 9999999999999999999985 321 1 11122 2345766 566987 45799
Q ss_pred eEEeCHHHHhhccCCCCcCCC----------CChHHHHHHHHHHHHHhcCch-------------HHHHHHHHHHHHHHH
Q 012368 325 AALVTEKVASAINYGDHGSTF----------AGSPLVCNAAIAVLDKISNPA-------------FLASVSKKGHYFKET 381 (465)
Q Consensus 325 ~v~~~~~i~~~~~~~~~~~t~----------~~~~~~~~aa~a~L~~~~~~~-------------~~~~~~~~~~~l~~~ 381 (465)
++++++++++.+.+......+ +.+....++..++++.+.+.+ ..+.+++....+.+.
T Consensus 226 ~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 305 (397)
T TIGR01976 226 ILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEY 305 (397)
T ss_pred EEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHH
Confidence 999999988777643211111 123344455555555542211 134444444555555
Q ss_pred HHHHHHcCCCceeee-----ccceEEEEEec-CChHHHHHHHHHCCceEeecC--------------CCCEEEEecCCCC
Q 012368 382 LKQKLARNPHVKDVR-----GLGLIIGIEFD-VSATPVVDACRDSGLLVLTAG--------------KGNVVRLVPPLII 441 (465)
Q Consensus 382 l~~~~~~~~~~~~~~-----~~g~~~~i~~~-~~~~~~~~~l~~~Gv~v~~~~--------------~~~~lRi~~~~~~ 441 (465)
+.+.+.+.+.+.... ..+.++.+.++ ....++.++|.++||.+..+. .++++|++++..+
T Consensus 306 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~ 385 (397)
T TIGR01976 306 LLVGLSDLPGVTLYGVARLAARVPTVSFTVHGLPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYN 385 (397)
T ss_pred HHHHHhcCCCEEEeCCCCccCCCceEEEEeCCcCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccC
Confidence 555555554222221 24556666653 456789999999999998651 1358999999999
Q ss_pred cHHHHHHHHHHH
Q 012368 442 SEQELDQAVEIL 453 (465)
Q Consensus 442 t~e~i~~~l~~l 453 (465)
|++|++++++.|
T Consensus 386 t~~di~~l~~~l 397 (397)
T TIGR01976 386 TAEEVDRLLEAL 397 (397)
T ss_pred CHHHHHHHHHhC
Confidence 999999998864
No 223
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.90 E-value=3e-21 Score=193.23 Aligned_cols=326 Identities=12% Similarity=0.072 Sum_probs=205.6
Q ss_pred cccccCCCCCHHHHHHHHHHHhhcccc------cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhh
Q 012368 107 IAVNALGHGDADWIKAVVDQANVLTHV------SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQR 180 (465)
Q Consensus 107 ~~~~~lGh~~p~v~~a~~~~~~~~~~~------~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~ 180 (465)
.+..-+|..++.+++|+.+........ ......+...++++.++++++.+.+++++|+++|+..+++.+..
T Consensus 24 ~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~~l~~--- 100 (387)
T PRK09331 24 DPIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMHSLCK--- 100 (387)
T ss_pred ChhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcC---
Confidence 344567888899999999987542211 01112345789999999999988899999999999999987641
Q ss_pred hcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCC--CCCceEeeCCCHHHHHhhcCC------CCeEEEEE
Q 012368 181 HSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPV--MPGVNFVEYGNIEATRKLIQP------GKTAAVFV 252 (465)
Q Consensus 181 ~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~le~~l~~------~~~a~vi~ 252 (465)
++++|++..+++.+.... +...+..... .+. ..+.. .|+++++++++. .++++|++
T Consensus 101 --------~gd~Vlv~~~~h~s~~~~-~~~~G~~~~~---v~~~~~~~~~----~d~~~l~~~l~~~~~~~~~~~~lV~l 164 (387)
T PRK09331 101 --------KGDYVVLDGLAHYTSYVA-AERAGLNVRE---VPKTGYPEYK----ITPEAYAEKIEEVKEETGKPPALALL 164 (387)
T ss_pred --------CCCEEEECCCchHHHHHH-HHHcCCEEEE---EeCccCcCCC----cCHHHHHHHHHHhhhccCCCCEEEEE
Confidence 578888887766554432 2222211100 011 01111 378999998863 25778888
Q ss_pred cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHH
Q 012368 253 EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKV 332 (465)
Q Consensus 253 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i 332 (465)
+..+++.|.+.+ +++|.++|++||+++|+|++|+ +|..+ +....+++...+.+++|+++++.++|++++++++
T Consensus 165 ~~~~~~tG~~~~----l~~I~~la~~~g~~livD~a~~-~g~~~--~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~~ 237 (387)
T PRK09331 165 THVDGNYGNLAD----AKKVAKVAHEYGIPFLLNGAYT-VGRMP--VDGKKLGADFIVGSGHKSMAASAPSGVLATTEEY 237 (387)
T ss_pred ECCCCCCccccc----HHHHHHHHHHcCCEEEEECCcc-cCCcC--CCHHHcCCCEEEeeCcccccCCCCEEEEEECHHH
Confidence 877777777765 9999999999999999999997 33221 1222344434445678999987899999999998
Q ss_pred HhhccCCCCcC------CCC--ChHHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHHHHHcCCCceee---eccce
Q 012368 333 ASAINYGDHGS------TFA--GSPLVCNAAIAVLDKISN-PAFLASVSKKGHYFKETLKQKLARNPHVKDV---RGLGL 400 (465)
Q Consensus 333 ~~~~~~~~~~~------t~~--~~~~~~~aa~a~L~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~g~ 400 (465)
++.+....... .++ ..+....+++++++.+.+ .+.+++..++.+++++.|.+ .+.+... .+...
T Consensus 238 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~----l~g~~~~~~~~~~~~ 313 (387)
T PRK09331 238 ADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEK----IEGFKQLGEKPRNHD 313 (387)
T ss_pred HhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCEEEeccCcCcCC
Confidence 88764321000 011 222334444555554322 22334444555555555543 4322222 22334
Q ss_pred EEEEEec----------CChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhhc
Q 012368 401 IIGIEFD----------VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDSN 463 (465)
Q Consensus 401 ~~~i~~~----------~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 463 (465)
++.++.. ....++.+.|.++||...+.+.+..+|+.. ..+|++++++++++|+++++++.-+
T Consensus 314 i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~i~ri~~-~g~t~~di~~l~~aL~~i~~~~~~~ 385 (387)
T PRK09331 314 LMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIKPGATKEFKLST-YGLTWEQVEYVADAFKEIAEKYGLE 385 (387)
T ss_pred eEEEeCCchhHHhhhccccchhHHHHHHHcCceEEccCCceEEEEEe-ccCCHHHHHHHHHHHHHHHHhcCCC
Confidence 4444422 123468899999999855544445667664 4589999999999999998876533
No 224
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=8e-21 Score=188.54 Aligned_cols=327 Identities=19% Similarity=0.203 Sum_probs=223.9
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCC-------CCHHHHHHHHHHHhhcC---CCeEEecCCHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMY-------YSIPQIELAKRLVACSF---ADRVFFSNTGTEA 167 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~-------~~~~~~~la~~l~~~~~---~~~v~~~~sG~eA 167 (465)
--|+|...+ +..|..|.+++.+............ .+...++.++.++++.+ .+.|+||.+.|+|
T Consensus 23 ~vylD~aa~------~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~a 96 (405)
T COG0520 23 LVYLDNAAT------SQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEA 96 (405)
T ss_pred eEEecCccc------ccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHH
Confidence 357886654 3467889999998775432111111 12236778888888887 3789999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCC-----CHHHHHhhc
Q 012368 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG-----NIEATRKLI 242 (465)
Q Consensus 168 ~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l 242 (465)
+..+........ .++|.||+.+-.+|........+..... ..+..+|.+ |++++++.+
T Consensus 97 ln~va~~l~~~~--------~~gdeIv~s~~EH~sn~~pw~~~~~~~G---------a~v~~i~~~~~g~~~~~~~~~~i 159 (405)
T COG0520 97 LNLVARGLGRSL--------KPGDEIVVSDLEHHSNIVPWQELAKRTG---------AKVRVIPLDDDGLLDLDALEKLI 159 (405)
T ss_pred HHHHHHHhhhhh--------cCCCEEEEccCcchhhHHHHHHHHHhcC---------cEEEEEecCCCCCcCHHHHHHhc
Confidence 998887653211 1579999999999887765544432111 122333321 689999988
Q ss_pred CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccCCCc
Q 012368 243 QPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGG 320 (465)
Q Consensus 243 ~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G 320 (465)
++ ++++|.+..+.+..|++.| +++|.++|+++|+++++|-+|+ ++.. ..+...+..|...|| |++.|.
T Consensus 160 ~~-~Tklvais~vSn~tG~~~p----v~~I~~la~~~ga~v~VDaaq~-~~h~----~idv~~l~~Df~afsgHKwl~gP 229 (405)
T COG0520 160 TP-KTKLVALSHVSNVTGTVNP----VKEIAELAHEHGALVLVDAAQA-AGHL----PIDVQELGCDFLAFSGHKWLLGP 229 (405)
T ss_pred CC-CceEEEEECccccccccch----HHHHHHHHHHcCCEEEEECccc-cCcc----CCCchhcCCCEEEEcccccccCC
Confidence 64 6889999999999999887 9999999999999999999986 3211 233344567999888 988877
Q ss_pred cceeeEEeCHHHHhhccCCCC------------cCCC----------CChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 012368 321 LPIGAALVTEKVASAINYGDH------------GSTF----------AGSPLVCNAAIAVLDKISNPAFLASVSKKGHYF 378 (465)
Q Consensus 321 ~~iG~v~~~~~i~~~~~~~~~------------~~t~----------~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l 378 (465)
-.+|.+++++++++.+.|... ..++ ..|.....+..++++.+.+-. .+.+.+....+
T Consensus 230 ~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig-~~~i~~~e~~L 308 (405)
T COG0520 230 TGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIG-MEAIEAHEREL 308 (405)
T ss_pred CceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHh-HHHHHHHHHHH
Confidence 789999999999998865311 1111 123344444456666554322 34444444445
Q ss_pred HHHHHHHHHcCCCceee--e--ccceEEEEEe-cCChHHHHHHHHHCCceEeecCC-----------CCEEEEecCCCCc
Q 012368 379 KETLKQKLARNPHVKDV--R--GLGLIIGIEF-DVSATPVVDACRDSGLLVLTAGK-----------GNVVRLVPPLIIS 442 (465)
Q Consensus 379 ~~~l~~~~~~~~~~~~~--~--~~g~~~~i~~-~~~~~~~~~~l~~~Gv~v~~~~~-----------~~~lRi~~~~~~t 442 (465)
.+.+.+.+.+.|.+... . ..+.++.+.+ .....++...|.++||.++.+.. ...+|+++++..|
T Consensus 309 ~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt 388 (405)
T COG0520 309 TEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNT 388 (405)
T ss_pred HHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCC
Confidence 55555555555533221 1 3566777777 35688999999999988876532 1239999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 012368 443 EQELDQAVEILCKTLP 458 (465)
Q Consensus 443 ~e~i~~~l~~l~~~l~ 458 (465)
++|||++++.|+++.+
T Consensus 389 ~edid~l~~aL~~~~~ 404 (405)
T COG0520 389 EEDVDRLLEALKKALA 404 (405)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998764
No 225
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.90 E-value=1.4e-21 Score=193.87 Aligned_cols=310 Identities=16% Similarity=0.081 Sum_probs=198.7
Q ss_pred CCHHHHHHHHHHHhhcccccCCCC--CHHHHHHHHHHHhhcCC---CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 012368 115 GDADWIKAVVDQANVLTHVSNMYY--SIPQIELAKRLVACSFA---DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEP 189 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~~~~~--~~~~~~la~~l~~~~~~---~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~ 189 (465)
.++.|.+|+.+.+.. ..++ ....+++++.+++.++. +.+++++||++|+..+++... .+
T Consensus 10 ~~~~v~~a~~~~~~~-----~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~-----------~~ 73 (356)
T cd06451 10 VPPRVLKAMNRPMLG-----HRSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLL-----------EP 73 (356)
T ss_pred CCHHHHHHhCCCccC-----CCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhC-----------CC
Confidence 557777777654321 1222 23367888999999873 357899999999999888654 15
Q ss_pred CceEEEEcCCcccCcc-ccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHH
Q 012368 190 ATEFVSFTNSFHGRTM-GALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEF 268 (465)
Q Consensus 190 ~~~ii~~~~~yhg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~ 268 (465)
++.|++.+++|++... ......+.... ..+..+.. ..|++++++.++++++++|++...++..|.+.+
T Consensus 74 g~~vl~~~~~~~~~~~~~~~~~~g~~~~---~v~~~~~~----~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---- 142 (356)
T cd06451 74 GDKVLVGVNGVFGDRWADMAERYGADVD---VVEKPWGE----AVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---- 142 (356)
T ss_pred CCEEEEecCCchhHHHHHHHHHhCCCeE---EeecCCCC----CCCHHHHHHHHhccCCCEEEEeccCCCcccccC----
Confidence 7889999887766321 11111111110 11111110 137899999997535666666555555676655
Q ss_pred HHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEE--ecccCCCccceeeEEeCHHHHhhccC--CCC---
Q 012368 269 LQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMT--LAKPLAGGLPIGAALVTEKVASAINY--GDH--- 341 (465)
Q Consensus 269 l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t--~sK~lg~G~~iG~v~~~~~i~~~~~~--~~~--- 341 (465)
+++|.++|+++|+++|+|++|. +|.. ......+ .+|+++ .+|+++++.++|+++.++++++.+.. ...
T Consensus 143 ~~~i~~~a~~~~~~li~D~~~~-~g~~--~~~~~~~--~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~ 217 (356)
T cd06451 143 LEGIGALAKKHDALLIVDAVSS-LGGE--PFRMDEW--GVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFY 217 (356)
T ss_pred HHHHHHHHHhcCCEEEEeeehh-ccCc--ccccccc--CccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCcee
Confidence 8899999999999999999986 5422 1222222 346654 46999987778999999998877642 110
Q ss_pred --------------cCCCCChHHHHHHHHHHHHHhcC---chHHHHHHHHHHHHHHHHHHHHHcCCCceeeec-cceEEE
Q 012368 342 --------------GSTFAGSPLVCNAAIAVLDKISN---PAFLASVSKKGHYFKETLKQKLARNPHVKDVRG-LGLIIG 403 (465)
Q Consensus 342 --------------~~t~~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~g~~~~ 403 (465)
....+.++..+.++.++++.+.. +...++.+++.+++++.|+++ .+........ .+.+.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~ 295 (356)
T cd06451 218 FDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL--GLKLLAKPELRSPTVTA 295 (356)
T ss_pred ecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--CCeeccCcccCCCceEE
Confidence 11123455566777778876543 344556666666666666653 2222111111 233344
Q ss_pred EEec--CChHHHHHHHHHC-CceEeecC---CCCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 404 IEFD--VSATPVVDACRDS-GLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 404 i~~~--~~~~~~~~~l~~~-Gv~v~~~~---~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
+.++ .+..++++.|.++ ||.+.++. .++++|++++..+|++|+++++++|+++++
T Consensus 296 ~~~~~~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 296 VLVPEGVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred EECCCCCCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 5443 3567899999998 99998653 246899999999999999999999998763
No 226
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.89 E-value=3.2e-21 Score=191.08 Aligned_cols=312 Identities=14% Similarity=0.133 Sum_probs=197.6
Q ss_pred CCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCC----CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 012368 115 GDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFA----DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPA 190 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~----~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~ 190 (465)
.+|.|++++.+... +....+ .+...++++.+++.++. ..|+++.||++++..++..+.. ++
T Consensus 10 ~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~-----------~~ 74 (355)
T TIGR03301 10 TSATVRDAMLVDWC---HWDSEF-NDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVP-----------RD 74 (355)
T ss_pred CCHHHHHHhhhhcc---CCCHHH-HHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccC-----------CC
Confidence 45667777665221 211112 25578889999998872 2688899999999999987651 46
Q ss_pred ceEEEEcCCcccCccc-cccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCC-CCeEEEEEcccCCCCCcccCCHHH
Q 012368 191 TEFVSFTNSFHGRTMG-ALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP-GKTAAVFVEPIQGEGGIYSATKEF 268 (465)
Q Consensus 191 ~~ii~~~~~yhg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-~~~a~vi~ep~~~~~G~~~~~~~~ 268 (465)
+++++.++.+++.... .....+..... .+...+. ..|+++++++++. .++..+++..+++.+|.+.+
T Consensus 75 ~~vi~~~~~~~~~~~~~~a~~~g~~~~~---i~~~~~~----~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---- 143 (355)
T TIGR03301 75 GKLLVLINGAYGERLAKICEYLGIPHTD---LNFSEYE----PPDLNRIEEALAADPDITHVATVHHETTTGILNP---- 143 (355)
T ss_pred CeEEEECCCchhhHHHHHHHHcCCceEE---EecCCCC----CCCHHHHHHHHHhCCCceEEEEEecCCcccchhH----
Confidence 7788888877765321 11111111100 0111110 1278999999863 23444444334445566654
Q ss_pred HHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCC--------
Q 012368 269 LQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGD-------- 340 (465)
Q Consensus 269 l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~-------- 340 (465)
+++|.++|++||+++|+|++++ +|. ..+....+++...+.+++|+++++.++|++++++++++.+....
T Consensus 144 ~~~i~~l~~~~~~~livD~~~s-~g~--~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~ 220 (355)
T TIGR03301 144 LEAIAKVARSHGAVLIVDAMSS-FGA--IPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLY 220 (355)
T ss_pred HHHHHHHHHHcCCEEEEEeccc-cCC--cccchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCceeeHH
Confidence 8999999999999999999876 542 22233333443334567899976556799999999888765210
Q ss_pred ---------CcCCCCChHHHHHHHHHHHHHhcCc----hHHHHHHHHHHHHHHHHHHHHHcCCCcee-eeccceEEEEEe
Q 012368 341 ---------HGSTFAGSPLVCNAAIAVLDKISNP----AFLASVSKKGHYFKETLKQKLARNPHVKD-VRGLGLIIGIEF 406 (465)
Q Consensus 341 ---------~~~t~~~~~~~~~aa~a~L~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~g~~~~i~~ 406 (465)
....++.+++.+.++.++++.+.++ +..++++++.+++++.|+++ ....+.. ....+.++++.+
T Consensus 221 ~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~--g~~~~~~~~~~~~~~~~~~~ 298 (355)
T TIGR03301 221 DQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL--GFQPLLPERWQSPIIVSFLY 298 (355)
T ss_pred HHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc--CCeeecCCCCCCCcEEEEEC
Confidence 0123456777888888888876433 34455566666666666543 1111111 123345566666
Q ss_pred c----CChHHHHHHHHHCCceEeecCC--CCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 407 D----VSATPVVDACRDSGLLVLTAGK--GNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 407 ~----~~~~~~~~~l~~~Gv~v~~~~~--~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
+ ....++.+.|.++||.+.++.. .+++||++...++++|++++++.|++++
T Consensus 299 ~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 299 PDDPDFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred CCCCcchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 3 2346899999999999988642 2689999888889999999999998753
No 227
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.89 E-value=1.8e-20 Score=189.07 Aligned_cols=326 Identities=17% Similarity=0.110 Sum_probs=205.3
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCC-------CHHHHHHHHHHHhhcC---CCeEEecCCHHHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYY-------SIPQIELAKRLVACSF---ADRVFFSNTGTEAN 168 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~-------~~~~~~la~~l~~~~~---~~~v~~~~sG~eA~ 168 (465)
.|+|..+ .|-.++.|.+++.+.++.......... .....++++.+++.++ .++|++++|+++++
T Consensus 20 ~yld~~~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l 93 (403)
T TIGR01979 20 VYLDSAA------TSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESI 93 (403)
T ss_pred EEEeCcc------ccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHH
Confidence 5788654 344678899999887754211111111 1125577788888887 35899999999999
Q ss_pred HHHHHHHHH-HhhhcCCCCCCCCceEEEEcCCcccCcccccc---ccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCC
Q 012368 169 EAAIKFARK-FQRHSNPDSKEPATEFVSFTNSFHGRTMGALA---LTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP 244 (465)
Q Consensus 169 ~~al~~a~~-~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~ 244 (465)
..++..+.. .. ++++.|++.++.|++....... ..+.... ..+...+.. -|++++++.+.+
T Consensus 94 ~~~~~~~~~~~~--------~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~---~v~~~~~~~----~~~~~l~~~i~~ 158 (403)
T TIGR01979 94 NLVAYSWGDSNL--------KAGDEIVISEMEHHANIVPWQLLAERTGATLK---FIPLDDDGT----LDLDDLEKLLTE 158 (403)
T ss_pred HHHHHHhhhhcC--------CCCCEEEECcchhhHHHHHHHHHHHhcCcEEE---EEecCCCCC----CCHHHHHHHhcc
Confidence 988876531 11 1578899998887764322111 1111100 011111111 278999999975
Q ss_pred CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEE--ecccCCCccc
Q 012368 245 GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMT--LAKPLAGGLP 322 (465)
Q Consensus 245 ~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t--~sK~lg~G~~ 322 (465)
++++|++..+++..|.+.+ +++|.++|++||+++|+|++|. +|.. ..... ...+|+++ ++|.+|. ..
T Consensus 159 -~~~lv~~~~~~~~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~g~~--~~~~~--~~~~d~~~~s~~K~~gp-~G 227 (403)
T TIGR01979 159 -KTKLVAITHVSNVLGTVNP----VEEIAKLAHQVGAKVLVDGAQA-VPHM--PVDVQ--ALDCDFYVFSGHKMYGP-TG 227 (403)
T ss_pred -CCeEEEEEcccccccccCC----HHHHHHHHHHcCCEEEEEchhh-cCcc--ccCcc--ccCCCEEEEecccccCC-CC
Confidence 4666666666666777766 8999999999999999999986 3221 11122 23467764 5697753 34
Q ss_pred eeeEEeCHHHHhhccCCCCcC-----------C-------C---CChHHHHHHHHHHHHHhcC---chHHHHHHHHHHHH
Q 012368 323 IGAALVTEKVASAINYGDHGS-----------T-------F---AGSPLVCNAAIAVLDKISN---PAFLASVSKKGHYF 378 (465)
Q Consensus 323 iG~v~~~~~i~~~~~~~~~~~-----------t-------~---~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l 378 (465)
+|++++++++++.+.+...++ . | +.+...++++.++++.+.+ +...++..++.+++
T Consensus 228 ~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l 307 (403)
T TIGR01979 228 IGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYA 307 (403)
T ss_pred ceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 899999998877664321100 0 1 2345566677777776543 23445555555555
Q ss_pred HHHHHHHHHcCCCceeee-----ccceEEEEEec-CChHHHHHHHHHCCceEeecC-----------CCCEEEEecCCCC
Q 012368 379 KETLKQKLARNPHVKDVR-----GLGLIIGIEFD-VSATPVVDACRDSGLLVLTAG-----------KGNVVRLVPPLII 441 (465)
Q Consensus 379 ~~~l~~~~~~~~~~~~~~-----~~g~~~~i~~~-~~~~~~~~~l~~~Gv~v~~~~-----------~~~~lRi~~~~~~ 441 (465)
++.| ...+.+.... ..+.++.+.++ ....++.+.|.++||.+.++. .++++|++++...
T Consensus 308 ~~~l----~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~ 383 (403)
T TIGR01979 308 LERL----GEIPGLRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYN 383 (403)
T ss_pred HHHH----hcCCCEEEeCCCCccccCceEEEEeCCcCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCC
Confidence 4444 3343222221 23567777763 456778888999999987532 1368999999999
Q ss_pred cHHHHHHHHHHHHHHHHHh
Q 012368 442 SEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 442 t~e~i~~~l~~l~~~l~~~ 460 (465)
|++|++++++.|+++++.+
T Consensus 384 t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 384 TEEDIDALVEALKKVRKFF 402 (403)
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 9999999999999887654
No 228
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.89 E-value=2.2e-20 Score=189.49 Aligned_cols=329 Identities=16% Similarity=0.114 Sum_probs=207.9
Q ss_pred CCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCC-------CHHHHHHHHHHHhhcC---CCeEEecCCHHH
Q 012368 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYY-------SIPQIELAKRLVACSF---ADRVFFSNTGTE 166 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~-------~~~~~~la~~l~~~~~---~~~v~~~~sG~e 166 (465)
+..|||..+ .|..++.|.+++.+.+........... .....++++.++++++ .++|+|++|+++
T Consensus 32 ~~iyLd~a~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 105 (424)
T PLN02855 32 KLVYLDNAA------TSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATE 105 (424)
T ss_pred CeEEeeCcc------ccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHH
Confidence 346788644 244678899999887765321111111 1124577888888887 368999999999
Q ss_pred HHHHHHHHHH-HHhhhcCCCCCCCCceEEEEcCCcccCccccccc---cCCCCcCCCCCCCCCCceEeeCCCHHHHHhhc
Q 012368 167 ANEAAIKFAR-KFQRHSNPDSKEPATEFVSFTNSFHGRTMGALAL---TSKEHYRSPFEPVMPGVNFVEYGNIEATRKLI 242 (465)
Q Consensus 167 A~~~al~~a~-~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l 242 (465)
++..+++... ... .++++|++.++.|++........ .+.... +.+...+.. .|++++++.+
T Consensus 106 al~~i~~~~~~~~~--------~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~---~v~~~~~~~----~~~~~l~~~i 170 (424)
T PLN02855 106 AINLVAYTWGLANL--------KPGDEVILSVAEHHSNIVPWQLVAQKTGAVLK---FVGLTPDEV----LDVEQLKELL 170 (424)
T ss_pred HHHHHHHHhhhhcC--------CCcCEEEECCCccHHHHHHHHHHHHHcCCEEE---EEecCCCCC----cCHHHHHHHh
Confidence 9998887531 111 15788999998876543222111 111100 011111111 2789999999
Q ss_pred CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEE--EecccCCCc
Q 012368 243 QPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAGG 320 (465)
Q Consensus 243 ~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~--t~sK~lg~G 320 (465)
++ ++++|++..+++..|.+.+ +++|.++|+++|+++|+|++|. +|.. . .+.....+|++ ++.|.+| .
T Consensus 171 ~~-~t~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~a~~-~g~~--~--~~~~~~~~d~~~~s~~K~~g-p 239 (424)
T PLN02855 171 SE-KTKLVATHHVSNVLGSILP----VEDIVHWAHAVGAKVLVDACQS-VPHM--P--VDVQTLGADFLVASSHKMCG-P 239 (424)
T ss_pred cc-CceEEEEeCccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCc--C--CCchhcCCCEEEeecccccC-C
Confidence 75 5677777777777777776 8899999999999999999995 4322 1 22222346766 4569543 3
Q ss_pred cceeeEEeCHHHHhhccCCCCcC------------------CC---CChHHHHHHHHHHHHHhcC---chHHHHHHHHHH
Q 012368 321 LPIGAALVTEKVASAINYGDHGS------------------TF---AGSPLVCNAAIAVLDKISN---PAFLASVSKKGH 376 (465)
Q Consensus 321 ~~iG~v~~~~~i~~~~~~~~~~~------------------t~---~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~ 376 (465)
.++|++++++++++.+.+...+. -| +.+..+.++..++++.+.+ +...++..++.+
T Consensus 240 ~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~ 319 (424)
T PLN02855 240 TGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGT 319 (424)
T ss_pred CccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 35899999999887765421000 01 1345566666677776543 233444445555
Q ss_pred HHHHHHHHHHHcCCCceee-------eccceEEEEEec-CChHHHHHHHHHC-CceEeecC-----------CCCEEEEe
Q 012368 377 YFKETLKQKLARNPHVKDV-------RGLGLIIGIEFD-VSATPVVDACRDS-GLLVLTAG-----------KGNVVRLV 436 (465)
Q Consensus 377 ~l~~~l~~~~~~~~~~~~~-------~~~g~~~~i~~~-~~~~~~~~~l~~~-Gv~v~~~~-----------~~~~lRi~ 436 (465)
++++.|+ +.+.+... ...+.++.+.++ ....++.+.|.++ ||.+..+. ..+.+|++
T Consensus 320 ~l~~~L~----~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS 395 (424)
T PLN02855 320 YLYEKLS----SVPGVRIYGPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARAS 395 (424)
T ss_pred HHHHHHh----cCCCEEEeCCCcccccCcccEEEEEECCcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEE
Confidence 5554443 34322211 123456677764 4567889999887 99987532 13579999
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 437 PPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 437 ~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
+++..|++|++++++.|+++++.++
T Consensus 396 ~~~ynt~~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 396 LYFYNTKEEVDAFIHALKDTIAFFS 420 (424)
T ss_pred eccCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987754
No 229
>PRK02948 cysteine desulfurase; Provisional
Probab=99.89 E-value=2e-20 Score=187.28 Aligned_cols=329 Identities=16% Similarity=0.119 Sum_probs=202.3
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCC------CCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMY------YSIPQIELAKRLVACSF--ADRVFFSNTGTEANEA 170 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~------~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~ 170 (465)
.|+|..+ .|..++.+++++.+.++......... .....+++++.+++.++ .++|++++|+++++..
T Consensus 2 ~yld~a~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~ 75 (381)
T PRK02948 2 IYLDYAA------TTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYL 75 (381)
T ss_pred EeccCCC------CCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHH
Confidence 3677554 34578899999998876432111111 11236678888888886 6789999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccc--cCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeE
Q 012368 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALAL--TSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTA 248 (465)
Q Consensus 171 al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a 248 (465)
+++.+..... .+++.|++....|+........+ .+.... ..+..... ..|++++++.+++ ++.
T Consensus 76 ~~~~~~~~~~-------~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~---~v~~~~~~----~~d~~~l~~~l~~-~~~ 140 (381)
T PRK02948 76 AIQSLLNALP-------QNKKHIITTPMEHASIHSYFQSLESQGYTVT---EIPVDKSG----LIRLVDLERAITP-DTV 140 (381)
T ss_pred HHHHHHHhcc-------CCCCEEEECCcccHHHHHHHHHHHhCCCEEE---EEeeCCCC----CCCHHHHHHhcCC-CCE
Confidence 8887653110 13566666554443332221111 111100 01111111 1388999999875 456
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEE--EecccCCCccceeeE
Q 012368 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAGGLPIGAA 326 (465)
Q Consensus 249 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~--t~sK~lg~G~~iG~v 326 (465)
+|+++..++++|.+.+ +++|.++|+++|+++|+|++++ ||... .....++ .|++ +++|.+|. ..+|++
T Consensus 141 lv~~~~~~n~tG~~~~----~~~I~~l~~~~~~~vivD~~~~-~g~~~--~~~~~~~--~d~~~~s~~K~~gp-~G~G~l 210 (381)
T PRK02948 141 LASIQHANSEIGTIQP----IAEIGALLKKYNVLFHSDCVQT-FGKLP--IDVFEMG--IDSLSVSAHKIYGP-KGVGAV 210 (381)
T ss_pred EEEEECCcCCcEeehh----HHHHHHHHHHcCCEEEEEChhh-ccccc--cCcccCC--CCEEEecHHhcCCC-CcEEEE
Confidence 7777766667777765 8899999999999999998875 65332 2222333 4555 56798763 237888
Q ss_pred EeCHHH-HhhccCC----CCcCCCCChHHHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHHHHcCCCceeeec--
Q 012368 327 LVTEKV-ASAINYG----DHGSTFAGSPLVCNAAIAVLDKISN--PAFLASVSKKGHYFKETLKQKLARNPHVKDVRG-- 397 (465)
Q Consensus 327 ~~~~~i-~~~~~~~----~~~~t~~~~~~~~~aa~a~L~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-- 397 (465)
++++++ +..+.+. .....++.|.++++++.++++.+.+ ++..++++++.+++++.|+++ +......+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~v~~~~~~ 286 (381)
T PRK02948 211 YINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTL----PLPIEVEGHS 286 (381)
T ss_pred EEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEeCCC
Confidence 887764 1111110 0112345788888888888886522 334455555555555555443 32111111
Q ss_pred ---cceEEEEEec-CChHHHHHHHHHCCceEeecCC----------------------CCEEEEecCCCCcHHHHHHHHH
Q 012368 398 ---LGLIIGIEFD-VSATPVVDACRDSGLLVLTAGK----------------------GNVVRLVPPLIISEQELDQAVE 451 (465)
Q Consensus 398 ---~g~~~~i~~~-~~~~~~~~~l~~~Gv~v~~~~~----------------------~~~lRi~~~~~~t~e~i~~~l~ 451 (465)
...++.+.+. .+..++...|.++||.+..+.. ++++|++++..+|++|++++++
T Consensus 287 ~~~~~~i~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~ 366 (381)
T PRK02948 287 TSCLPHIIGVTIKGIEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIH 366 (381)
T ss_pred ccCcCCEEEEEeCCCCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHH
Confidence 1223334443 3567788888899999985320 2689999999999999999999
Q ss_pred HHHHHHHHhhh
Q 012368 452 ILCKTLPVLDS 462 (465)
Q Consensus 452 ~l~~~l~~~~~ 462 (465)
.|+++++++.+
T Consensus 367 ~l~~~~~~~~~ 377 (381)
T PRK02948 367 ALETIGNQFYR 377 (381)
T ss_pred HHHHHHHHHhc
Confidence 99999877643
No 230
>PLN02368 alanine transaminase
Probab=99.89 E-value=1e-21 Score=196.38 Aligned_cols=246 Identities=10% Similarity=-0.004 Sum_probs=159.7
Q ss_pred HHHHHHHHHHHhhcC----CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCC
Q 012368 140 IPQIELAKRLVACSF----ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEH 215 (465)
Q Consensus 140 ~~~~~la~~l~~~~~----~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~ 215 (465)
+.++++++++.+.++ .++|++|+|+++|+..+++++.. ++++.|++++|+|+.+...+...+....
T Consensus 111 ~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~----------~pGd~Vli~~P~Y~~y~~~~~~~g~~~v 180 (407)
T PLN02368 111 GVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIR----------GEKDGVLVPVPQYPLYSATISLLGGTLV 180 (407)
T ss_pred HHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcC----------CCCCEEEEeCCCCccHHHHHHHcCCEEE
Confidence 446777777766544 67999999999999998886641 1689999999999988766554443221
Q ss_pred cCCCCCCCCCCceEeeCCCHHHHHhhcCC------CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 012368 216 YRSPFEPVMPGVNFVEYGNIEATRKLIQP------GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQ 289 (465)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~------~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (465)
.. +...+..+- -|+++|++.+++ +..++++++|.|++| .+.+++.+++|.++|++||++||+||+|
T Consensus 181 ~v----~~~~~~~~~--~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG--~v~s~e~l~~l~~~a~~~~~~II~DE~Y 252 (407)
T PLN02368 181 PY----YLEESENWG--LDVNNLRQSVAQARSKGITVRAMVIINPGNPTG--QCLSEANLREILKFCYQERLVLLGDEVY 252 (407)
T ss_pred EE----ecccccCCC--CCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCC--ccCCHHHHHHHHHHHHHcCCEEEEEccc
Confidence 11 111111111 278999998862 234477888977766 3568999999999999999999999999
Q ss_pred cCCCCCCc-cc-cc-cc----------cCCcccEEEecccC-C-CccceeeEE---eCHHHHhhccCCCCcCCCCChHHH
Q 012368 290 CGLGRTGY-LW-AH-EH----------YGIFPDIMTLAKPL-A-GGLPIGAAL---VTEKVASAINYGDHGSTFAGSPLV 351 (465)
Q Consensus 290 ~g~gr~g~-~~-~~-~~----------~~~~pdi~t~sK~l-g-~G~~iG~v~---~~~~i~~~~~~~~~~~t~~~~~~~ 351 (465)
..+.+.+. .+ .. .. .+...-+.+|||++ + .|||+||++ +++++++.+... ...+++.|.++
T Consensus 253 ~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~-~~~~~~~~~~~ 331 (407)
T PLN02368 253 QQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKV-ASIALSPNVSG 331 (407)
T ss_pred cccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHH-hcccCCCCcHH
Confidence 98754442 11 11 11 11122234689999 5 599999998 488888887653 23467788899
Q ss_pred HHHHHHHHHHhc--C---chHHHHH---HHHHHHHHHHHHHHHHcCCCceeeeccceEEEE
Q 012368 352 CNAAIAVLDKIS--N---PAFLASV---SKKGHYFKETLKQKLARNPHVKDVRGLGLIIGI 404 (465)
Q Consensus 352 ~~aa~a~L~~~~--~---~~~~~~~---~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i 404 (465)
|.|+.++|+.-. + +++.++. .+..+..++.+.+.+.+.+.+....+.|.|+.+
T Consensus 332 Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~ 392 (407)
T PLN02368 332 QIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSF 392 (407)
T ss_pred HHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEec
Confidence 999999886321 0 1122222 222222333344444555555555566766643
No 231
>PLN02397 aspartate transaminase
Probab=99.88 E-value=8.9e-21 Score=191.64 Aligned_cols=253 Identities=10% Similarity=0.069 Sum_probs=149.8
Q ss_pred CCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCC--CCeEE-EEEcccCCCCCcccCC
Q 012368 189 PATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP--GKTAA-VFVEPIQGEGGIYSAT 265 (465)
Q Consensus 189 ~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--~~~a~-vi~ep~~~~~G~~~~~ 265 (465)
++|.|++.+|+|.++...+...+...... ++.....+ -.|++.+++.+.. .++.+ ++.+|.||+| .+++
T Consensus 141 pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v----~l~~~~~~--~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG--~v~s 212 (423)
T PLN02397 141 PGSTIYIPNPTWGNHHNIFRDAGVPVRTY----RYYDPKTR--GLDFDGLLEDLKAAPDGSFVLLHACAHNPTG--VDPT 212 (423)
T ss_pred CCCEEEEeCCCchhHHHHHHHcCCeEEEe----ecccCcCC--ccCHHHHHHHHHhCCCCCEEEEeCCCCCCCC--CCCC
Confidence 68999999999988876555444332211 11000000 0277877776641 23333 3344566665 4568
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCCCCCc---ccccccc---C-CcccEEEecccCC-CccceeeEE--e-CHHHHh
Q 012368 266 KEFLQFLRDACDDAGALLVFDEVQCGLGRTGY---LWAHEHY---G-IFPDIMTLAKPLA-GGLPIGAAL--V-TEKVAS 334 (465)
Q Consensus 266 ~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~---~~~~~~~---~-~~pdi~t~sK~lg-~G~~iG~v~--~-~~~i~~ 334 (465)
.+.+++|.++|++||+++|+||+|.+|...+. ......+ + ...-+.+|||.++ .|||+||++ + ++++++
T Consensus 213 ~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~ 292 (423)
T PLN02397 213 PEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAV 292 (423)
T ss_pred HHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHH
Confidence 99999999999999999999999999854331 1111111 1 1223347999999 599999984 4 555444
Q ss_pred h----ccCCCCcCCCCChHHHHHHHHHHHHHhc-CchH---HHHHHHHHHHHHHHHHHHHHcCC---Cceee-eccceEE
Q 012368 335 A----INYGDHGSTFAGSPLVCNAAIAVLDKIS-NPAF---LASVSKKGHYFKETLKQKLARNP---HVKDV-RGLGLII 402 (465)
Q Consensus 335 ~----~~~~~~~~t~~~~~~~~~aa~a~L~~~~-~~~~---~~~~~~~~~~l~~~l~~~~~~~~---~~~~~-~~~g~~~ 402 (465)
. +........++.+.+++.++.++|+... .+.+ ++++++..+..++.+.+.+.+++ .+..+ +..|.|+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl 372 (423)
T PLN02397 293 RVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITKQIGMFS 372 (423)
T ss_pred HHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccCCceEEE
Confidence 3 3221222334566778888777775311 0111 23333333333333433333332 12222 3345556
Q ss_pred EEEecCChHHHHHHHH-HCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 403 GIEFDVSATPVVDACR-DSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 403 ~i~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
|+.++ .++++.|+ +.||.+.+. + |+++. ..+++.+++++++|++++.
T Consensus 373 ~~~l~---~~~~~~Ll~~~~V~v~~~---~--Ri~~~-~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 373 FTGLN---KEQVDRMTKEYHIYMTRD---G--RISMA-GLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred ecCCC---HHHHHHHHHhCCEEECCC---C--eEEEe-eCCHHHHHHHHHHHHHHHh
Confidence 66553 45888886 569998642 2 77653 3789999999999999974
No 232
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.88 E-value=4e-20 Score=184.60 Aligned_cols=313 Identities=17% Similarity=0.136 Sum_probs=198.0
Q ss_pred CCHHHHHHHHHHHhhcccccCCCCC--HHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 012368 115 GDADWIKAVVDQANVLTHVSNMYYS--IPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPA 190 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~~~~~~--~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~ 190 (465)
++|.+.+++.+...........++. ....+++++|+++++ .+.+++++||++++..++.+++..... . .++
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~----~~g 106 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLARE-E----KRT 106 (373)
T ss_pred chHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhc-c----CCC
Confidence 5677788887765442111222222 335788999999998 457889999999999988876542210 0 135
Q ss_pred ceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC-----CCHHHHHhhcCCCCeEEEEEcccCCCCCcccCC
Q 012368 191 TEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-----GNIEATRKLIQPGKTAAVFVEPIQGEGGIYSAT 265 (465)
Q Consensus 191 ~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~ 265 (465)
+.|++.+++|+.+...+...+. .+..++. .|++++++++++++.+++++.|. ++.|.+.+
T Consensus 107 ~~vl~~~~~h~~~~~~~~~~G~-------------~~~~v~~~~~~~~d~~~l~~~l~~~~~~vv~~~~~-~~tG~~~~- 171 (373)
T TIGR03812 107 PNIIVPESAHFSFEKAAEMLGL-------------ELRYAPLDEDYTVDVKDVEDLIDDNTIGIVGIAGT-TELGQIDD- 171 (373)
T ss_pred cEEEECCcchHHHHHHHHHcCC-------------eEEEEeeCCCCCcCHHHHHHHHhhCcEEEEEECCC-CCCCccCC-
Confidence 7899998888765432221111 1122222 38999999997555566667665 44566655
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCCCC----Ccc-ccccccCCcccEEEec--ccCCCccceeeEE-eCHHHHhhcc
Q 012368 266 KEFLQFLRDACDDAGALLVFDEVQCGLGRT----GYL-WAHEHYGIFPDIMTLA--KPLAGGLPIGAAL-VTEKVASAIN 337 (465)
Q Consensus 266 ~~~l~~l~~l~~~~g~llI~DEv~~g~gr~----g~~-~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~-~~~~i~~~~~ 337 (465)
+++|.++|+++|+++|+|++|.++-.. |.. ...+..-...|.+++| |...++.|.|+++ .++++++.+.
T Consensus 172 ---~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~l~ 248 (373)
T TIGR03812 172 ---IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLKYLS 248 (373)
T ss_pred ---HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHhhhc
Confidence 899999999999999999999754100 000 0011111134666554 7444567887665 5777777663
Q ss_pred CCC-C-cCC------CCChHHHHHHHHHHHHHhcCc---hHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEe
Q 012368 338 YGD-H-GST------FAGSPLVCNAAIAVLDKISNP---AFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEF 406 (465)
Q Consensus 338 ~~~-~-~~t------~~~~~~~~~aa~a~L~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~ 406 (465)
... . ... .+.++..++++.++|+.+.++ +..++..++.+++++.|+++ +......+...++.+.+
T Consensus 249 ~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~v~~~~ 324 (373)
T TIGR03812 249 VDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI----GFEPVIEPVLNIVAFEV 324 (373)
T ss_pred ccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEEcCCCceEEEEEe
Confidence 211 0 110 123456777888888876543 34566666666666666553 32222233455555655
Q ss_pred cCChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHH
Q 012368 407 DVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCK 455 (465)
Q Consensus 407 ~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~ 455 (465)
+ ...++.+.|.++||++.....+.++|++++..+|++|++++++.|++
T Consensus 325 ~-~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 325 D-DPEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred C-CHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 3 35679999999999998764447899999989999999999999875
No 233
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.88 E-value=1.5e-20 Score=186.80 Aligned_cols=283 Identities=12% Similarity=0.121 Sum_probs=186.8
Q ss_pred HHHHHHHHHHhhcCC----CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCcc-ccccccCCCC
Q 012368 141 PQIELAKRLVACSFA----DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTM-GALALTSKEH 215 (465)
Q Consensus 141 ~~~~la~~l~~~~~~----~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~-~~~~~~~~~~ 215 (465)
...++++.+++.++. +.|++|+||++|++.++..+.. +++++|+..+++++... ......+
T Consensus 36 ~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~-----------~~~~vlv~~~~~~~~~~~~~a~~~g--- 101 (363)
T TIGR02326 36 VVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVP-----------KDGKLLVVINGAYGARIVQIAEYLG--- 101 (363)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCC-----------CCCeEEEEeCChhhHHHHHHHHHcC---
Confidence 366778888888872 3699999999999998876541 46778887777777641 1111111
Q ss_pred cCCCCCCCCCCceEeeC-----CCHHHHHhhcCCC-CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 012368 216 YRSPFEPVMPGVNFVEY-----GNIEATRKLIQPG-KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQ 289 (465)
Q Consensus 216 ~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~-~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (465)
..+..++. .|+++++++++.+ ++.++.+..+.+.+|.+.+ +++|.++|++||+++|+|+++
T Consensus 102 ---------~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~----i~~I~~l~~~~g~~livD~~~ 168 (363)
T TIGR02326 102 ---------IPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNP----IEAVAKLAHRHGKVTIVDAMS 168 (363)
T ss_pred ---------CceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc----HHHHHHHHHHcCCEEEEEccc
Confidence 11122221 2789999998742 3455555555566777766 899999999999999999988
Q ss_pred cCCCCCCccccccccCCcccEE--EecccCCCccceeeEEeCHHHHhhccCCC------------------CcCCCCChH
Q 012368 290 CGLGRTGYLWAHEHYGIFPDIM--TLAKPLAGGLPIGAALVTEKVASAINYGD------------------HGSTFAGSP 349 (465)
Q Consensus 290 ~g~gr~g~~~~~~~~~~~pdi~--t~sK~lg~G~~iG~v~~~~~i~~~~~~~~------------------~~~t~~~~~ 349 (465)
+ +|.. ......+ .+|++ +++|+++++.++|+++++++.++.+.+.. ....|..++
T Consensus 169 ~-~g~~--~~~~~~~--~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~ 243 (363)
T TIGR02326 169 S-FGGI--PIDIAEL--HIDYLISSANKCIQGVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPT 243 (363)
T ss_pred c-ccCc--ccchhhc--CccEEEecCccccccCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcH
Confidence 6 5432 2233333 35665 46699987666899999998877653210 012345677
Q ss_pred HHHHHHHHHHHHhcCc----hHHHHHHHHHHHHHHHHHHHHHcCCCceee-eccceEEEEEec----CChHHHHHHHHHC
Q 012368 350 LVCNAAIAVLDKISNP----AFLASVSKKGHYFKETLKQKLARNPHVKDV-RGLGLIIGIEFD----VSATPVVDACRDS 420 (465)
Q Consensus 350 ~~~~aa~a~L~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~i~~~----~~~~~~~~~l~~~ 420 (465)
..+.+..++++.+.++ +..++++++.+++++.|+++ .+...... ...+.+.++.++ .+..++.+.|.++
T Consensus 244 ~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~ 321 (363)
T TIGR02326 244 HVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL--GFEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRLKEQ 321 (363)
T ss_pred HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc--CCeeccCcccCCceEEEEECCCCCCCCHHHHHHHHHHC
Confidence 7778877888765333 34455566666666666543 22111111 123444556653 2456788999999
Q ss_pred CceEeecCC--CCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 421 GLLVLTAGK--GNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 421 Gv~v~~~~~--~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
||.+.++.. .+.+|+++....+.+++++++++|++++
T Consensus 322 gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 322 GFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred CEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 999987642 3689999766789999999999998876
No 234
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.88 E-value=4.1e-20 Score=183.58 Aligned_cols=316 Identities=13% Similarity=0.079 Sum_probs=191.8
Q ss_pred cCCCCCHHHHHHHHHHHhhcccccC------CCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCC
Q 012368 111 ALGHGDADWIKAVVDQANVLTHVSN------MYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNP 184 (465)
Q Consensus 111 ~lGh~~p~v~~a~~~~~~~~~~~~~------~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~ 184 (465)
+=|+..|.+++++.+........+. ...++...++.+++++.++.+++++++|+++++..+++....
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~~------- 81 (361)
T cd06452 9 RGGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLCE------- 81 (361)
T ss_pred cCCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhcC-------
Confidence 3466778888888887643222111 112345789999999999989999999999999998886641
Q ss_pred CCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCC------CCeEEEEEcccCCC
Q 012368 185 DSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP------GKTAAVFVEPIQGE 258 (465)
Q Consensus 185 ~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~------~~~a~vi~ep~~~~ 258 (465)
++++|++..++|.+....+...+.... . .+...+..+ ..|++++++++++ .++++|++...++.
T Consensus 82 ----~gd~Vl~~~~~~~~~~~~~~~~g~~~~-~---v~~~~~~~~--~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~ 151 (361)
T cd06452 82 ----KGDWVVVDGLAHYTSYVAAERAGLNVR-E---VPNTGHPEY--HITPEGYAEVIEEVKDEFGKPPALALLTHVDGN 151 (361)
T ss_pred ----CCCEEEEcCCcchHHHHHHHhcCCEEE-E---EecCCCCCc--ccCHHHHHHHHHHHhhccCCCceEEEEECCCCC
Confidence 578899988877655422221211111 0 111111000 1278999888852 24556665554555
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccC
Q 012368 259 GGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINY 338 (465)
Q Consensus 259 ~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~ 338 (465)
.|...+ +++|.++|+++|+++|+||+|. +|.. .+....++....+.+++|++++|.|+|++++++++++.+..
T Consensus 152 tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~--~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~ 224 (361)
T cd06452 152 YGNLHD----AKKIAKVCHEYGVPLLLNGAYT-VGRM--PVSGKELGADFIVGSGHKSMAASAPIGVLATTEEWADIVFR 224 (361)
T ss_pred Ceeecc----HHHHHHHHHHcCCeEEEECCcc-cCCc--CCCHHHcCCCEEEecCCccccCCCCeEEEEECHHHHHHHhc
Confidence 565544 8999999999999999999986 3221 12223334433445678999877799999999999888754
Q ss_pred CCCc------CCCC--ChHHHHHHHHHHHHHhcCchHHHHHH---HHHHHHHHHHHHHHHcCCCceee---eccceEEEE
Q 012368 339 GDHG------STFA--GSPLVCNAAIAVLDKISNPAFLASVS---KKGHYFKETLKQKLARNPHVKDV---RGLGLIIGI 404 (465)
Q Consensus 339 ~~~~------~t~~--~~~~~~~aa~a~L~~~~~~~~~~~~~---~~~~~l~~~l~~~~~~~~~~~~~---~~~g~~~~i 404 (465)
.... ..+. .++..+.++.++++.+. +..+++. ++.+++++.| .+.+.+..+ .+..+++.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~--~~~~~~~~~~~~~~~l~~~L----~~l~g~~v~~~~~~~~n~~~~ 298 (361)
T cd06452 225 TSQMFKIKEVELLGCTLRGAPLVTLMASFPHVK--ERVKRWDEEVEKARWFVAEL----EKIEGIKQLGEKPKNHDLMFF 298 (361)
T ss_pred cccccccceeeeeccccCchHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH----hcCCCeEEECCCCCCCceEEE
Confidence 2211 0011 11223444455554331 1122222 2234444444 444322221 234455555
Q ss_pred Eec----------CChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 405 EFD----------VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 405 ~~~----------~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
+.. ....++.+.|+++||.+...+.++++|+... .+++++++.++++|++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~ri~~~-g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 299 ETPSFDEIAKKHKRRGYFLYSELKKRGIHGIKPGLTRYFKLSTY-GLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred EcCCcchhhhhccccchhHHHHHHHcCceEEcCCCceEEEEEec-CCCHHHHHHHHHHHHHHh
Confidence 542 1123689999999999755444568899863 379999999999998654
No 235
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.88 E-value=7.8e-20 Score=183.01 Aligned_cols=325 Identities=17% Similarity=0.150 Sum_probs=197.9
Q ss_pred EEecccCcccccCCCCCHHHHHHHHHHHhhccccc---CCCCCHHHHHHHHHHHhh---cC---CCeEEecCCHHHHHHH
Q 012368 100 YLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS---NMYYSIPQIELAKRLVAC---SF---ADRVFFSNTGTEANEA 170 (465)
Q Consensus 100 ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~---~~~~~~~~~~la~~l~~~---~~---~~~v~~~~sG~eA~~~ 170 (465)
|+|..++.. .++.|++++.+.++.....+ ..++......+.+.+++. .+ .++|+||+|++|++..
T Consensus 2 yld~aa~~~------~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~ 75 (382)
T TIGR03403 2 YLDNNATTM------LDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNW 75 (382)
T ss_pred cccCcCCCC------CCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHH
Confidence 677666533 67889999999886521111 112222233444444333 33 5799999999999999
Q ss_pred HHHHHHH-Hh-hhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC-----CCHHHHHhhcC
Q 012368 171 AIKFARK-FQ-RHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-----GNIEATRKLIQ 243 (465)
Q Consensus 171 al~~a~~-~t-~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~ 243 (465)
+++.+.. .. . +++++|++....|+........+.. ....+..+|. -|+++++++++
T Consensus 76 ~~~~~~~~~~~~-------~~~~~vi~~~~e~ps~~~~~~~~~~----------~G~~v~~v~~~~~g~~d~~~l~~~i~ 138 (382)
T TIGR03403 76 VLKGVYFDEILK-------GGKNHIITTEVEHPAVRATCAFLES----------LGVEVTYLPINEQGTITAEQVREAIT 138 (382)
T ss_pred HHHHHHHhhccc-------CCCCEEEEcCCccHHHHHHHHHHHH----------CCCEEEEEecCCCCCCCHHHHHHhcc
Confidence 9886531 00 1 1245688776555444322111100 0011222222 17899999997
Q ss_pred CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccCCCcc
Q 012368 244 PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGL 321 (465)
Q Consensus 244 ~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~ 321 (465)
+ ++++|++...++.+|.+.+ +++|.++|+++|+++|+|+++. +|.. ..+.....+|++++| |.+| ..
T Consensus 139 ~-~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~~ivD~a~~-~g~~----~~~~~~~~~D~~~~s~~K~~g-p~ 207 (382)
T TIGR03403 139 E-KTALVSVMWANNETGMIFP----IKEIGEICKERGVLFHTDAVQA-IGKI----PVDVQKAGVDFLSFSAHKFHG-PK 207 (382)
T ss_pred c-CCeEEEEEcccCCCccccC----HHHHHHHHHHcCCEEEEechhh-cCCC----ccCccccCCCEEEEcchhhCC-CC
Confidence 5 3566666655666677666 8899999999999999999986 3321 122223457888777 9654 22
Q ss_pred ceeeEEeCHHHHhhccCCCC-------cCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCcee
Q 012368 322 PIGAALVTEKVASAINYGDH-------GSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKD 394 (465)
Q Consensus 322 ~iG~v~~~~~i~~~~~~~~~-------~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 394 (465)
.+|+++.++.. .+.+... ...++.|.+++.++.++++...+ ..+...+..+.+++.|.+.+.+.+.+..
T Consensus 208 G~g~l~vr~~~--~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~--~~~~~~~~~~~l~~~l~~~L~~~~~~~~ 283 (382)
T TIGR03403 208 GVGGLYIRKGV--ELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANE--YLDFEKSHVRRLRDRLEDALLELPDVFV 283 (382)
T ss_pred ceEEEEECCCC--CCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 36777776543 1212110 11334677777777777875532 2344444445555555554444553333
Q ss_pred eec----cceEEEEEec-CChHHHHHHHHHCCceEeecC-----------------C-----CCEEEEecCCCCcHHHHH
Q 012368 395 VRG----LGLIIGIEFD-VSATPVVDACRDSGLLVLTAG-----------------K-----GNVVRLVPPLIISEQELD 447 (465)
Q Consensus 395 ~~~----~g~~~~i~~~-~~~~~~~~~l~~~Gv~v~~~~-----------------~-----~~~lRi~~~~~~t~e~i~ 447 (465)
+.+ .+.++.+.++ .+...+...|.++||.++.+. . ++.+|++++...|++|+|
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did 363 (382)
T TIGR03403 284 VGDREHRVPNTILISIKGVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEID 363 (382)
T ss_pred ECCCCCCcCCEEEEEeCCCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHH
Confidence 322 1445556663 467778888889999998521 0 257999999999999999
Q ss_pred HHHHHHHHHHHHhhh
Q 012368 448 QAVEILCKTLPVLDS 462 (465)
Q Consensus 448 ~~l~~l~~~l~~~~~ 462 (465)
++++.|++++++++.
T Consensus 364 ~~~~~l~~~~~~~~~ 378 (382)
T TIGR03403 364 YTIEVFKKAVQRLRA 378 (382)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999887654
No 236
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.87 E-value=8.5e-20 Score=184.05 Aligned_cols=327 Identities=20% Similarity=0.169 Sum_probs=196.2
Q ss_pred CCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccC-C------CCCHHHHHHHHHHHhhcC--CCeEEecCCHHH
Q 012368 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSN-M------YYSIPQIELAKRLVACSF--ADRVFFSNTGTE 166 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~------~~~~~~~~la~~l~~~~~--~~~v~~~~sG~e 166 (465)
++..|+|..+ +|..++.+.+++.+.+........ . .......++ +.+ +.++ +++|+|++|+++
T Consensus 26 ~~~iyld~~a------~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~g~~~~~v~~~~~~t~ 97 (406)
T TIGR01814 26 NAVIYLDGNS------LGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESL-LKL-RLVGAKEDEVVVMNTLTI 97 (406)
T ss_pred CCcEEecCCC------cCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhh-ccc-cccCCCCCcEEEeCCchH
Confidence 3346777443 344578899999887765322111 0 111222333 334 5666 678999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCcccccc---ccCCCCcCCCCCCCCCCceEeeC-----CCHHHH
Q 012368 167 ANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALA---LTSKEHYRSPFEPVMPGVNFVEY-----GNIEAT 238 (465)
Q Consensus 167 A~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l 238 (465)
++..+++.+.... .+++.|++.+..|+........ ..+... .. -...++. -|++++
T Consensus 98 ~l~~~~~~~~~~~--------~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~-~~-------~~~~~~~~~~g~~~~~~l 161 (406)
T TIGR01814 98 NLHLLLASFYKPT--------PKRYKILLEAKAFPSDHYAIESQLQLHGLTV-EE-------SMVQIEPREEETLRLEDI 161 (406)
T ss_pred HHHHHHHHhcCCc--------CCccEEEecCCCCChHHHHHHHHHHhcCCCc-cc-------ceEEeccCCCCccCHHHH
Confidence 9999888652100 0123456555666443221111 111110 00 0011111 167888
Q ss_pred HhhcC--CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEe--c
Q 012368 239 RKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTL--A 314 (465)
Q Consensus 239 e~~l~--~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~--s 314 (465)
+++++ .+++++|+++.+++.+|.+.| +++|.++|+++|+++++|++|+ +|.. .+.....+ +|++++ .
T Consensus 162 ~~~~~~~~~~t~lv~~~~v~~~tG~~~~----~~~i~~~~~~~g~~~~vD~aq~-~G~~--~id~~~~g--vD~~~~s~h 232 (406)
T TIGR01814 162 LDTIEKNGDDIAVILLSGVQYYTGQLFD----MAAITRAAHAKGALVGFDLAHA-VGNV--PLDLHDWG--VDFACWCTY 232 (406)
T ss_pred HHHHHhcCCCeEEEEEeccccccceecC----HHHHHHHHHHcCCEEEEEcccc-cCCc--ccccccCC--CCEEEEcCc
Confidence 88774 346889999999999999887 9999999999999999999997 4432 22233334 566654 5
Q ss_pred ccCCCccceeeEEeCHHHHhhccCCCCc-------------C----------CCCChHHHHHHHHHHHHHhcC---chHH
Q 012368 315 KPLAGGLPIGAALVTEKVASAINYGDHG-------------S----------TFAGSPLVCNAAIAVLDKISN---PAFL 368 (465)
Q Consensus 315 K~lg~G~~iG~v~~~~~i~~~~~~~~~~-------------~----------t~~~~~~~~~aa~a~L~~~~~---~~~~ 368 (465)
|++.+|.. |+++..++..+.+.+...+ . ..+.|..++++..++|+.+.+ +...
T Consensus 233 K~l~g~pG-~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~ 311 (406)
T TIGR01814 233 KYLNAGPG-AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALR 311 (406)
T ss_pred cccCCCCC-eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHH
Confidence 99976543 4444433333233221000 0 012455677777788887744 3455
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCce-----eeeccceEEEEEecCChHHHHHHHHHCCceEeecCCCCEEEEec-CCCCc
Q 012368 369 ASVSKKGHYFKETLKQKLARNPHVK-----DVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVP-PLIIS 442 (465)
Q Consensus 369 ~~~~~~~~~l~~~l~~~~~~~~~~~-----~~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~-~~~~t 442 (465)
++.+++.+++++.|+++....+.+. .....+.++.+.++.+..++.+.|.++||.+..... +.+|+++ ++.+|
T Consensus 312 ~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~~~~~~~~~~L~~~gi~v~~~~~-~~iRiS~~~~~nt 390 (406)
T TIGR01814 312 KKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHPVPGKAVFQALIKRGVIGDKREP-SVIRVAPVPLYNT 390 (406)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEecCCHHHHHHHHHHCCEEEeccCC-CeEEEechhccCC
Confidence 6666666666666655321011111 111234566666654567899999999998875443 6899999 68999
Q ss_pred HHHHHHHHHHHHHHH
Q 012368 443 EQELDQAVEILCKTL 457 (465)
Q Consensus 443 ~e~i~~~l~~l~~~l 457 (465)
++||++++++|++++
T Consensus 391 ~~did~l~~~l~~~~ 405 (406)
T TIGR01814 391 FVDVYDAVNVLEEIL 405 (406)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998764
No 237
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.87 E-value=2.1e-19 Score=182.18 Aligned_cols=319 Identities=13% Similarity=0.058 Sum_probs=199.8
Q ss_pred HHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEc
Q 012368 118 DWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFT 197 (465)
Q Consensus 118 ~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~ 197 (465)
.+.+++.+++..... .+.+.....+|++.++++++.+.|++|+||++|+..++.+.. +++| ||+.+
T Consensus 58 a~~~a~~~a~~~g~~--~Y~~~~g~~~Lreaia~~~~~~~vv~t~ggt~A~~~~~~all-----------~pGD-Vii~~ 123 (460)
T PRK13238 58 AMSDRQWAAMMRGDE--AYAGSRSYYRLEDAVKDIFGYPYTIPTHQGRAAEQILFPVLI-----------KKGD-VVPSN 123 (460)
T ss_pred hhhHHHHHHHHhCCc--ccCCCCCHHHHHHHHHHHhCCCcEEECCCHHHHHHHHHHHhC-----------CCCC-EEccC
Confidence 477777777754322 222344477899999999998899999999999999987664 2678 99999
Q ss_pred CCcccCccccccccCCCCcCCCCCCCCCC---ceEeeC---CCHHHHHhhcCC---CCeEEEEEcccCCCCCcccCCHHH
Q 012368 198 NSFHGRTMGALALTSKEHYRSPFEPVMPG---VNFVEY---GNIEATRKLIQP---GKTAAVFVEPIQGEGGIYSATKEF 268 (465)
Q Consensus 198 ~~yhg~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~d~~~le~~l~~---~~~a~vi~ep~~~~~G~~~~~~~~ 268 (465)
|.|..+.......++.+.+. +.... ...-++ -|+++|++++.+ .++++|+++..++.+|..+++.+.
T Consensus 124 p~~~~~~~~i~~~G~~~v~v----~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~ 199 (460)
T PRK13238 124 YHFDTTRAHIELNGATAVDL----VIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMAN 199 (460)
T ss_pred CcccchHHHHHHcCCEEEEE----eccccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHH
Confidence 98876654444444433322 11110 000011 289999999973 346666666544444435668999
Q ss_pred HHHHHHHHHHhCCEEEEeccccC----CCCC---Cc-cccccc----cCCcccEEEec--ccCCCccceeeEEeC-HHHH
Q 012368 269 LQFLRDACDDAGALLVFDEVQCG----LGRT---GY-LWAHEH----YGIFPDIMTLA--KPLAGGLPIGAALVT-EKVA 333 (465)
Q Consensus 269 l~~l~~l~~~~g~llI~DEv~~g----~gr~---g~-~~~~~~----~~~~pdi~t~s--K~lg~G~~iG~v~~~-~~i~ 333 (465)
+++|+++|++||++||.|+++.. |+.. |. ...... .+-..|+.++| |...++. .|+++++ ++++
T Consensus 200 l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~-GG~i~~~d~~l~ 278 (460)
T PRK13238 200 LRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNI-GGLLCFRDEDLF 278 (460)
T ss_pred HHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcc-eeEEEcChHHHH
Confidence 99999999999999999997642 1100 10 000000 01125666666 2222212 3566666 5788
Q ss_pred hhccCCC---C-cCCCCChHHH-HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecC
Q 012368 334 SAINYGD---H-GSTFAGSPLV-CNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV 408 (465)
Q Consensus 334 ~~~~~~~---~-~~t~~~~~~~-~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~ 408 (465)
+.++... + ..|+++.+.. ++|...+|+...++++.+...++.++|.+.|.+. .++.+ .+..|.++.+++..
T Consensus 279 ~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~~--G~~~~--~p~Gg~~v~~d~~~ 354 (460)
T PRK13238 279 TECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIGQVEYLGEGLEEA--GVPIQ--TPAGGHAVFVDAGK 354 (460)
T ss_pred HHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHHHHHHHHHHHHHHHC--CCCeE--ccCCceEEEEEchh
Confidence 7776532 2 3478876555 5555556765445566666666667777777653 34332 23345555566521
Q ss_pred ----------ChHHHHHHHH-HCCceEeecC----------------CCCEEEEecCC-CCcHHHHHHHHHHHHHHHHH
Q 012368 409 ----------SATPVVDACR-DSGLLVLTAG----------------KGNVVRLVPPL-IISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 409 ----------~~~~~~~~l~-~~Gv~v~~~~----------------~~~~lRi~~~~-~~t~e~i~~~l~~l~~~l~~ 459 (465)
.+.+++.+|+ +.||.+.+.+ ..+.+||.++- ..|.++++.+.++|.++.++
T Consensus 355 ~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 355 FLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred cCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 3467888877 6799887753 02679998874 44899999999999887654
No 238
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.87 E-value=1.5e-19 Score=180.74 Aligned_cols=309 Identities=14% Similarity=0.110 Sum_probs=193.2
Q ss_pred CCHHHHHHHHHHHhhcccc--cCCCCC-----HHHHHHHHHHHhhcC---CCeEEecCCHHHHHHHHHHHHHHHhhhcCC
Q 012368 115 GDADWIKAVVDQANVLTHV--SNMYYS-----IPQIELAKRLVACSF---ADRVFFSNTGTEANEAAIKFARKFQRHSNP 184 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~--~~~~~~-----~~~~~la~~l~~~~~---~~~v~~~~sG~eA~~~al~~a~~~t~~~~~ 184 (465)
.++.+.+++.+.++..... ...+.. ....++++.++++++ .++|++++|+++++..++....
T Consensus 12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~-------- 83 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLL-------- 83 (376)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhcc--------
Confidence 5678999999888764211 111221 346788889999887 2489999999999998887532
Q ss_pred CCCCCCceEEEEcCCcccCccccccc---cCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCc
Q 012368 185 DSKEPATEFVSFTNSFHGRTMGALAL---TSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGI 261 (465)
Q Consensus 185 ~~~~~~~~ii~~~~~yhg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~ 261 (465)
.++++|++.++.|++........ .+.... ..+...+. ..|++++++++++ ++++|++...++.+|.
T Consensus 84 ---~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~---~v~~~~~~----~~d~~~l~~~~~~-~~~~v~~~~~~n~tG~ 152 (376)
T TIGR01977 84 ---KEGDHVITTPMEHNSVARPLECLKEQIGVEIT---IVKCDNEG----LISPERIKRAIKT-NTKLIVVSHASNVTGT 152 (376)
T ss_pred ---CCCCEEEECcchhhHHHHHHHHHHHHcCcEEE---EEecCCCC----CcCHHHHHHhcCC-CCeEEEEECCCCCccc
Confidence 15788999887775543211111 011100 00111111 1279999999975 4566666665566676
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccCCCccceeeEEeCHHH-HhhccC
Q 012368 262 YSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKV-ASAINY 338 (465)
Q Consensus 262 ~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i-~~~~~~ 338 (465)
+.+ +++|.++|+++|+++|+|++++ +|... +... ...+|++++| |+++++-..|+++.+++. +..+..
T Consensus 153 ~~~----~~~i~~l~~~~~~~livD~a~~-~g~~~--~~~~--~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~ 223 (376)
T TIGR01977 153 ILP----IEEIGELAQENGIFFILDAAQT-AGVIP--IDMT--ELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKS 223 (376)
T ss_pred cCC----HHHHHHHHHHcCCEEEEEhhhc-cCccC--CCch--hcCCCEEEecccccccCCCCceEEEEcCCcCcCceec
Confidence 665 8899999999999999999996 43321 1122 2346777655 998764456766665543 222211
Q ss_pred CCC---c-------------CCCCChHHHHHHHHHHHHHhcCc---hHHHHHHHHHHHHHHHHHHHHHcCCCceee----
Q 012368 339 GDH---G-------------STFAGSPLVCNAAIAVLDKISNP---AFLASVSKKGHYFKETLKQKLARNPHVKDV---- 395 (465)
Q Consensus 339 ~~~---~-------------~t~~~~~~~~~aa~a~L~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---- 395 (465)
... . ...+.+...+.+..++++.+.+. ...++.+++.+++++.|.+ .+.+...
T Consensus 224 ~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~----~~~~~~~~~~~ 299 (376)
T TIGR01977 224 GGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLRE----INKVKIYGPAD 299 (376)
T ss_pred CCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc----CCCeEEeCCCC
Confidence 100 0 01123455666777778776543 3455666666666665554 2322111
Q ss_pred -eccceEEEEEec-CChHHHHHHHHHC-CceEeecC-------------CCCEEEEecCCCCcHHHHHHHHHHHHH
Q 012368 396 -RGLGLIIGIEFD-VSATPVVDACRDS-GLLVLTAG-------------KGNVVRLVPPLIISEQELDQAVEILCK 455 (465)
Q Consensus 396 -~~~g~~~~i~~~-~~~~~~~~~l~~~-Gv~v~~~~-------------~~~~lRi~~~~~~t~e~i~~~l~~l~~ 455 (465)
...+.++.+.++ .+..++.+.|.++ ||.+..+. ..+.+|++++..+|++|++.++++|++
T Consensus 300 ~~~~~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 300 PANRVGVVSFTVEGIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred ccccCCeEEEEECCCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 113556666663 4667899999987 99886532 236899999999999999999999875
No 239
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.86 E-value=4.6e-19 Score=178.45 Aligned_cols=329 Identities=15% Similarity=0.140 Sum_probs=199.2
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCC-CC------CHHHHHHHHHHHhhcC--CCeEEecCCHHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNM-YY------SIPQIELAKRLVACSF--ADRVFFSNTGTEAN 168 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~-~~------~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~ 168 (465)
+.|+|..+.. ..++.|++++.+.+......... .. .+...++++.+++.++ .++|+|++|+++++
T Consensus 4 ~~yld~aa~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~ 77 (402)
T TIGR02006 4 PIYLDYAATT------PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESN 77 (402)
T ss_pred cEEeeCCcCC------CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHH
Confidence 4688977643 36789999998877542111111 11 1235567788888887 56899999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccc--cCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCC
Q 012368 169 EAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALAL--TSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGK 246 (465)
Q Consensus 169 ~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~ 246 (465)
..+++.+..+.. .++++|++..+.|+........+ .+.... ..+...+.. .|++++++++++ +
T Consensus 78 ~~~l~~l~~~~~-------~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~---~v~~~~~~~----~d~~~l~~~l~~-~ 142 (402)
T TIGR02006 78 NLAIKGIAHFYK-------SKGNHIITSKTEHKAVLDTCRYLEREGFEVT---YLPPKSNGL----IDLEELKAAIRD-D 142 (402)
T ss_pred HHHHHHHHHhhc-------CCCCEEEECCCccHHHHHHHHHHHhcCCEEE---EEccCCCCc----CCHHHHHHhcCC-C
Confidence 999887653211 14677888777655433222111 111100 011111111 278999999975 4
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccCCCcccee
Q 012368 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIG 324 (465)
Q Consensus 247 ~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~~iG 324 (465)
+++|++..+++..|.+.+ +++|.++|+++|+++|+|++|+ +|.. .++..+..+|++++| |.+| ...+|
T Consensus 143 ~~lv~v~~~~n~tG~~~~----~~~I~~l~~~~g~~livD~a~a-~g~~----~~~~~~~~~D~~~~s~~K~~g-p~G~G 212 (402)
T TIGR02006 143 TILVSIMHVNNEIGVIQD----IAAIGEICRERKVFFHVDAAQS-VGKI----PINVNELKVDLMSISGHKIYG-PKGIG 212 (402)
T ss_pred CEEEEEECCCcCceeccc----HHHHHHHHHHcCCEEEEEcchh-cCCc----ccCccccCCCEEEEehhhhcC-CCceE
Confidence 677777777777787766 8999999999999999999996 4322 122234568999988 9664 34588
Q ss_pred eEEeCHHHHhhccCCCCc-------CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceee--
Q 012368 325 AALVTEKVASAINYGDHG-------STFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDV-- 395 (465)
Q Consensus 325 ~v~~~~~i~~~~~~~~~~-------~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-- 395 (465)
+++.+++....+.+...+ ...+.+...+.+..++|+.+.+ . .+...+..+.+++.+.+.+...+.+...
T Consensus 213 ~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~-~-~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~ 290 (402)
T TIGR02006 213 ALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKE-E-MAQDTAHVLALRDRLLNGIKSIEEVYLNGD 290 (402)
T ss_pred EEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHH-h-HHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Confidence 988887655444432221 1123455556666677876643 2 3333444455555555444444422211
Q ss_pred -e-ccceEEEEEec-CChHHHHHHHHHCCceEeecC----------------------CCCEEEEecCCCCcHHHHHHHH
Q 012368 396 -R-GLGLIIGIEFD-VSATPVVDACRDSGLLVLTAG----------------------KGNVVRLVPPLIISEQELDQAV 450 (465)
Q Consensus 396 -~-~~g~~~~i~~~-~~~~~~~~~l~~~Gv~v~~~~----------------------~~~~lRi~~~~~~t~e~i~~~l 450 (465)
. .....+.+.|. .+...+...| +|+.+..+. ..+.+|++++...|++|+|+++
T Consensus 291 ~~~~~p~~~~v~f~~~~~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~ 368 (402)
T TIGR02006 291 LEHRVPGNLNVSFNYVEGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAV 368 (402)
T ss_pred ccccCCCeEEEEEeCcCHHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHH
Confidence 1 11111123332 3444555444 355543220 0267999999999999999999
Q ss_pred HHHHHHHHHhh
Q 012368 451 EILCKTLPVLD 461 (465)
Q Consensus 451 ~~l~~~l~~~~ 461 (465)
+.|+++++.++
T Consensus 369 ~~l~~~~~~~~ 379 (402)
T TIGR02006 369 KLVKSAIDKLR 379 (402)
T ss_pred HHHHHHHHHHH
Confidence 99999987764
No 240
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.86 E-value=1.8e-19 Score=179.52 Aligned_cols=311 Identities=12% Similarity=0.079 Sum_probs=191.2
Q ss_pred CCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCC----CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 012368 115 GDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFA----DRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPA 190 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~----~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~ 190 (465)
.+|.+.+++.+.. .+.... ......++++.+++.++. +.|++++||++++..++..+.. ++
T Consensus 16 ~~~~~~~a~~~~~---~~~~~~-~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~-----------~~ 80 (368)
T PRK13479 16 TSRTVREAMLRDW---GSWDDD-FNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVP-----------RD 80 (368)
T ss_pred CCHHHHHHhCCCC---CCCChH-HHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccC-----------CC
Confidence 4566666655433 111111 123477888888888872 4588999999999999886641 57
Q ss_pred ceEEEEcCCcccCcc-ccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCC-CeEEEEEcccCCCCCcccCCHHH
Q 012368 191 TEFVSFTNSFHGRTM-GALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPG-KTAAVFVEPIQGEGGIYSATKEF 268 (465)
Q Consensus 191 ~~ii~~~~~yhg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-~~a~vi~ep~~~~~G~~~~~~~~ 268 (465)
++|++.+++|++... ......+..... .+...+. ..|+++++++++.+ ++.+|++..+++.+|...+
T Consensus 81 ~~vlv~~~~~~~~~~~~~~~~~g~~~~~---i~~~~~~----~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---- 149 (368)
T PRK13479 81 GKVLVPDNGAYGARIAQIAEYLGIAHVV---LDTGEDE----PPDAAEVEAALAADPRITHVALVHCETTTGILNP---- 149 (368)
T ss_pred CeEEEEeCCchHHHHHHHHHHcCCcEEE---EECCCCC----CCCHHHHHHHHHhCCCCcEEEEEcccCccccccC----
Confidence 788888888776531 111111111100 1111111 13789999988632 3444444444445566665
Q ss_pred HHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEE--EecccCCCccceeeEEeCHHHHhhccCCCC-----
Q 012368 269 LQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAGGLPIGAALVTEKVASAINYGDH----- 341 (465)
Q Consensus 269 l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~--t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~----- 341 (465)
+++|.++|+++|+++|+|+++ .||.. ...... ..+|++ +++|++.|+.++|++++++++++.+.....
T Consensus 150 ~~~i~~l~~~~~~~livDa~~-~~g~~--~~~~~~--~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~ 224 (368)
T PRK13479 150 LDEIAAVAKRHGKRLIVDAMS-SFGAI--PIDIAE--LGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSLD 224 (368)
T ss_pred HHHHHHHHHHcCCEEEEEccc-ccCCc--cccccc--cCceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCeeec
Confidence 889999999999999999776 46432 222222 235665 466998765557999999998877654211
Q ss_pred ------------cCCCCChHHHHHHHHHHHHHhcCc----hHHHHHHHHHHHHHHHHHHHHHcCCCceeee---ccceEE
Q 012368 342 ------------GSTFAGSPLVCNAAIAVLDKISNP----AFLASVSKKGHYFKETLKQKLARNPHVKDVR---GLGLII 402 (465)
Q Consensus 342 ------------~~t~~~~~~~~~aa~a~L~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---~~g~~~ 402 (465)
...|+.+...+.+..++++.+.++ +..+++.++.+++++.|++ ++...... ..+...
T Consensus 225 ~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~ 300 (368)
T PRK13479 225 LYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRA----LGFEPLLDAEIQSPIIV 300 (368)
T ss_pred HHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHH----cCCcccCCchhcCceEE
Confidence 111356666677777777765333 3344555555555555544 33211111 112223
Q ss_pred EEEec----CChHHHHHHHHHCCceEeecCC--CCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 403 GIEFD----VSATPVVDACRDSGLLVLTAGK--GNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 403 ~i~~~----~~~~~~~~~l~~~Gv~v~~~~~--~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
.+.+. .+..++.+.|.++||.+.++.. .+.+|++.....+++|++++++.|+++++++
T Consensus 301 ~~~~~~~~~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 301 TFHAPADPAYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred EEECCCCCCcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 33332 2457899999999999987532 2579998655679999999999999998765
No 241
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.85 E-value=5.4e-19 Score=176.22 Aligned_cols=315 Identities=18% Similarity=0.216 Sum_probs=209.5
Q ss_pred EEecccCcccccCCCCCHHHHHHHHHHHhhccccc--C-CCC----CHHHHHHHHHHHhhcC--C-CeEEecCCHHHHHH
Q 012368 100 YLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS--N-MYY----SIPQIELAKRLVACSF--A-DRVFFSNTGTEANE 169 (465)
Q Consensus 100 ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~--~-~~~----~~~~~~la~~l~~~~~--~-~~v~~~~sG~eA~~ 169 (465)
|+|..+ .|..++.|.+++.+.+....... . ... .+...+.++.+++.++ . +.|+|++|+++|+.
T Consensus 2 Yld~~~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~ 75 (371)
T PF00266_consen 2 YLDNAG------TGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALN 75 (371)
T ss_dssp EEBTSS------S-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHH
T ss_pred EeeCCC------ccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhh
Confidence 666544 34578999999999876532211 1 111 1225678888888887 4 68999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC-----CCHHHHHhhcCC
Q 012368 170 AAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-----GNIEATRKLIQP 244 (465)
Q Consensus 170 ~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~ 244 (465)
.++..+..... ++++|++.+..|++............ ...+..++. .|++++++.++
T Consensus 76 ~~~~~l~~~~~--------~g~~vl~~~~~~~s~~~~~~~~~~~~---------g~~v~~i~~~~~~~~~~~~~~~~l~- 137 (371)
T PF00266_consen 76 AVASSLLNPLK--------PGDEVLVTSNEHPSNRYPWEEIAKRK---------GAEVRVIPADPGGSLDLEDLEEALN- 137 (371)
T ss_dssp HHHHHHHHHGT--------TTCEEEEEESSHHHHHHHHHHHHHHT---------TEEEEEEEEGTTSSCSHHHHHHHHH-
T ss_pred hhhhccccccc--------cccccccccccccccccccccccccc---------hhhhccccccccchhhhhhhhhhhc-
Confidence 99998743221 58899999999887763222211000 011112221 27899999997
Q ss_pred CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccCCCccc
Q 012368 245 GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLP 322 (465)
Q Consensus 245 ~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~~ 322 (465)
.++.+|++..+.+..|.+.| +++|.++|+++|+++++|-+++ +|.. ..+.....+|++++| | ++|+..
T Consensus 138 ~~~~lv~~~~~~~~tG~~~p----i~~I~~~~~~~~~~~~vD~~~~-~g~~----~id~~~~~~D~~~~s~~K-l~gp~G 207 (371)
T PF00266_consen 138 PDTRLVSISHVENSTGVRNP----IEEIAKLAHEYGALLVVDAAQS-AGCV----PIDLDELGADFLVFSSHK-LGGPPG 207 (371)
T ss_dssp TTESEEEEESBETTTTBBSS----HHHHHHHHHHTTSEEEEE-TTT-TTTS----S--TTTTTESEEEEESTS-TTSSST
T ss_pred cccceEEeecccccccEEee----eceehhhhhccCCceeEechhc-cccc----cccccccccceeeecccc-cCCCCc
Confidence 57889999999888898887 9999999999999999999987 5432 233334457888776 9 888777
Q ss_pred eeeEEeCHHHHhhccCCCCcCC------------------C---CChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 012368 323 IGAALVTEKVASAINYGDHGST------------------F---AGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKET 381 (465)
Q Consensus 323 iG~v~~~~~i~~~~~~~~~~~t------------------~---~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~ 381 (465)
+|+++.+++.++.+.+...+.. | ..+.+...+..++++.+.+.. .++++++...+.+.
T Consensus 208 ~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g-~~~i~~~~~~l~~~ 286 (371)
T PF00266_consen 208 LGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIG-IERIRERIRELAEY 286 (371)
T ss_dssp EEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred hhhheehhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccc-cccchhhhhhHHHH
Confidence 8999999999888854321111 1 245566667777787763322 34444444444444
Q ss_pred HHHHHHcCCCcee-----eeccceEEEEEe-cCChHHHHHHHHHCCceEeecCC-----------CCEEEEecCCCCcHH
Q 012368 382 LKQKLARNPHVKD-----VRGLGLIIGIEF-DVSATPVVDACRDSGLLVLTAGK-----------GNVVRLVPPLIISEQ 444 (465)
Q Consensus 382 l~~~~~~~~~~~~-----~~~~g~~~~i~~-~~~~~~~~~~l~~~Gv~v~~~~~-----------~~~lRi~~~~~~t~e 444 (465)
+.+.+.+.+.+.. ....+.++.+.+ ..+...+.+.|.++||.+..+.. ++.+|++++...|++
T Consensus 287 ~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~ 366 (371)
T PF00266_consen 287 LREALEELPGIEVLGPDDEPRRPSIVSFNLPGSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEE 366 (371)
T ss_dssp HHHHHHHTTTEEESSSSCGGBGTTEEEEEETTSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHH
T ss_pred HHhhhhcCCceeEeeecccccccceEEEeecCCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHH
Confidence 4444444453221 234566777777 45678899999999999987422 268999999999999
Q ss_pred HHHHH
Q 012368 445 ELDQA 449 (465)
Q Consensus 445 ~i~~~ 449 (465)
|||++
T Consensus 367 dv~~l 371 (371)
T PF00266_consen 367 DVDRL 371 (371)
T ss_dssp HHHHH
T ss_pred HHhhC
Confidence 99875
No 242
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.85 E-value=9.2e-19 Score=176.24 Aligned_cols=318 Identities=16% Similarity=0.111 Sum_probs=192.9
Q ss_pred CCHHHHHHHHHHH-hhcccccC--C--CCCHHHHHHHH----HHHhhcCCCeEE-ecCCHHHHHHHHHHHHHHHhhhcCC
Q 012368 115 GDADWIKAVVDQA-NVLTHVSN--M--YYSIPQIELAK----RLVACSFADRVF-FSNTGTEANEAAIKFARKFQRHSNP 184 (465)
Q Consensus 115 ~~p~v~~a~~~~~-~~~~~~~~--~--~~~~~~~~la~----~l~~~~~~~~v~-~~~sG~eA~~~al~~a~~~t~~~~~ 184 (465)
-||.|++|+...+ .+++.++. . ..++...+|++ +++++++.+.++ +++||+.|+..++....
T Consensus 40 ~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al~-------- 111 (416)
T PRK13034 40 TSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLALL-------- 111 (416)
T ss_pred CCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHhc--------
Confidence 3899999999985 65433211 1 12466788888 999999977774 57999999999998764
Q ss_pred CCCCCCceEEEEcCCcccCcccccccc-CCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEE-cccCCCCCcc
Q 012368 185 DSKEPATEFVSFTNSFHGRTMGALALT-SKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFV-EPIQGEGGIY 262 (465)
Q Consensus 185 ~~~~~~~~ii~~~~~yhg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~-ep~~~~~G~~ 262 (465)
.++|+|++...+|.+......... ....+........+. ....|+++++++++..++++|++ +++++. .
T Consensus 112 ---~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~d~~~le~~l~~~~~klVi~~~~~~g~---~ 182 (416)
T PRK13034 112 ---KPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRL---TGLIDYDEVEELAKEHKPKLIIAGFSAYPR---E 182 (416)
T ss_pred ---CCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccc---cCCcCHHHHHHHHhhcCCeEEEECCCcccc---c
Confidence 268888888877655222111110 000000000000000 01148999999886434667777 455443 2
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEE--EecccCCCccceeeEEeCH-HHHhhccCC
Q 012368 263 SATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAGGLPIGAALVTE-KVASAINYG 339 (465)
Q Consensus 263 ~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~--t~sK~lg~G~~iG~v~~~~-~i~~~~~~~ 339 (465)
.+ +++|.++|++||++||+|++|+ +|..+.+......+ ..|++ +++|+++|+. .|++++++ ++.+.++..
T Consensus 183 ~d----l~~l~~la~~~g~~livD~Aha-~G~~~~g~~~~~~~-~~Di~~~s~~K~l~g~~-GG~v~~~~~~~~~~~~~~ 255 (416)
T PRK13034 183 LD----FARFREIADEVGALLMVDMAHI-AGLVAAGEHPNPFP-HAHVVTTTTHKTLRGPR-GGMILTNDEEIAKKINSA 255 (416)
T ss_pred cC----HHHHHHHHHHcCCEEEEeCccc-ccCcccCCCCCCCC-CceEEEEeCcccCCCCC-CeEEEECcHHHHHHHHhh
Confidence 23 8899999999999999999986 44444321111111 25665 5679996533 36666654 444444432
Q ss_pred CCcCC-CCChHHHHHH-HHHHHHHhcC--chHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEec---CChHH
Q 012368 340 DHGST-FAGSPLVCNA-AIAVLDKISN--PAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFD---VSATP 412 (465)
Q Consensus 340 ~~~~t-~~~~~~~~~a-a~a~L~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~---~~~~~ 412 (465)
...+. -+..+...++ +.+.++.+.. +++.+++.++.++|++.|.+. .++.... .+...+..+.+. .....
T Consensus 256 ~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~--G~~~~~~-~~~t~i~~v~~~~~~~~~~~ 332 (416)
T PRK13034 256 VFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER--GYDLVSG-GTDNHLLLVDLRPKGLSGKD 332 (416)
T ss_pred cCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc--CCEeccC-CCCCcEEEEEcCCCCCCHHH
Confidence 22221 1122333333 3344444422 345788889999999888764 3332211 123455556552 23355
Q ss_pred HHHHHHHCCceEeecC---------CCCEEEEecCC----CCcHHHHHHHHHHHHHHHHH
Q 012368 413 VVDACRDSGLLVLTAG---------KGNVVRLVPPL----IISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 413 ~~~~l~~~Gv~v~~~~---------~~~~lRi~~~~----~~t~e~i~~~l~~l~~~l~~ 459 (465)
+.+.|.++||++.... ....+|++++. .++++|++++++.|.+++..
T Consensus 333 ~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 333 AEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDD 392 (416)
T ss_pred HHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence 6688888999997411 12469998877 77899999999999988764
No 243
>PLN02242 methionine gamma-lyase
Probab=99.85 E-value=1.2e-19 Score=182.07 Aligned_cols=297 Identities=14% Similarity=0.155 Sum_probs=187.2
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+..+.++...+|+++|+++.+.+.+++++||++|+..++..+.. ++|.|++.++.|.+..........
T Consensus 70 Y~r~~~Pt~~~LE~~lA~l~g~~~~l~~~sG~~Ai~~al~al~~-----------~GD~Vl~~~~~Y~~~~~~~~~~~~- 137 (418)
T PLN02242 70 YSRHFNPTVLNLGRQMAALEGTEAAYCTASGMSAISSVLLQLCS-----------SGGHVVASNTLYGGTHALLAHFLP- 137 (418)
T ss_pred ccCCCChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhC-----------CCCEEEEcCCcHHHHHHHHHHhhh-
Confidence 45567888999999999999988999999999999999987652 689999999988655322111000
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
......+.+++..|+++++++++++++++|+++..+++.|.+.+ +++|.++|++||++||+||+|+.+.
T Consensus 138 -------~~~G~~~~~~d~~d~e~l~~~i~~~~tklV~lesp~NPtG~v~d----l~~I~~la~~~gi~livDea~~~~~ 206 (418)
T PLN02242 138 -------RKCNITTTFVDITDLEAVKKAVVPGKTKVLYFESISNPTLTVAD----IPELARIAHEKGVTVVVDNTFAPMV 206 (418)
T ss_pred -------hccCceEEEcCCCCHHHHHHhcCcCCCEEEEEecCCCCCCcccC----HHHHHHHHHHhCCEEEEECCCCccC
Confidence 00112234455568999999997544677777766666666654 9999999999999999999997542
Q ss_pred CCCccccccccCCcccEEEecccCCC-ccc-eeeEEeCHHHHhhccCCCCc--CCCCChHHHHHHHHHHHHHhcCchHHH
Q 012368 294 RTGYLWAHEHYGIFPDIMTLAKPLAG-GLP-IGAALVTEKVASAINYGDHG--STFAGSPLVCNAAIAVLDKISNPAFLA 369 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~t~sK~lg~-G~~-iG~v~~~~~i~~~~~~~~~~--~t~~~~~~~~~aa~a~L~~~~~~~~~~ 369 (465)
... ..++...-+.++||.+++ |.+ .|++++++++++.+...... ..++..+..+.|++.++..-.-+...+
T Consensus 207 -~~~----~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l~tl~~r~~ 281 (418)
T PLN02242 207 -LSP----ARLGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSERLPHLSLRMK 281 (418)
T ss_pred -CCH----HHcCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCCCcHHHHHH
Confidence 211 122332333478899986 666 59999999988877643221 223334445555555443211133455
Q ss_pred HHHHHHHHHHHHHHHHHH--cCCCce----------ee---eccceEEEEEecC--ChHHHHHHHH------HCCce---
Q 012368 370 SVSKKGHYFKETLKQKLA--RNPHVK----------DV---RGLGLIIGIEFDV--SATPVVDACR------DSGLL--- 423 (465)
Q Consensus 370 ~~~~~~~~l~~~l~~~~~--~~~~~~----------~~---~~~g~~~~i~~~~--~~~~~~~~l~------~~Gv~--- 423 (465)
+.+++.+++.+.|++... .+|... .. .+.|.++.|++.. .+.+|++.|. ..++.
T Consensus 282 ~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~~~~~~~~~~~slG~ 361 (418)
T PLN02242 282 EHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTEERANRLMRYLQNSTQFGFMAVSLGY 361 (418)
T ss_pred HHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCHHHHHHHHHHhhcccccceeeecCCC
Confidence 667777777777766410 012100 11 3678899999842 2335555554 11111
Q ss_pred ----E-eec---------------C-CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 424 ----V-LTA---------------G-KGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 424 ----v-~~~---------------~-~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
+ .|. | ..+.+|+++.+.. +.+.+++-|+++|+.++
T Consensus 362 ~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~---~~~dli~dl~~al~~~~ 417 (418)
T PLN02242 362 YETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGYTG---TLEQRWSQFEKALSAMK 417 (418)
T ss_pred CCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecCCC---CHHHHHHHHHHHHHHhh
Confidence 1 010 0 1256899866531 36667788888887664
No 244
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.85 E-value=2.5e-19 Score=180.07 Aligned_cols=315 Identities=17% Similarity=0.105 Sum_probs=200.7
Q ss_pred CCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC---CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCc
Q 012368 115 GDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF---ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPAT 191 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~---~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~ 191 (465)
-+++|++|+.+.... +. .....+...+++++++++++ .+.+++++||+++++.++.... .+++
T Consensus 20 ~~~~V~~a~~~~~~~--~~-~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~-----------~~Gd 85 (401)
T PLN02409 20 IPERVLRAMNRPNED--HR-SPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTL-----------SPGD 85 (401)
T ss_pred CCHHHHHHhcCCCCC--CC-CHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcC-----------CCCC
Confidence 446666665443211 11 11122346778888888876 3468999999999998887543 2689
Q ss_pred eEEEEcCCcccCccccc-cccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCC---CCeEEEEEcccCCCCCcccCCHH
Q 012368 192 EFVSFTNSFHGRTMGAL-ALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP---GKTAAVFVEPIQGEGGIYSATKE 267 (465)
Q Consensus 192 ~ii~~~~~yhg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~a~vi~ep~~~~~G~~~~~~~ 267 (465)
+|++.+++|++.....+ ...+.... ..+...+.. .|+++++++++. +++++|++..+.+.+|.+.+
T Consensus 86 ~Vlv~~~~~~~~~~~~~~~~~g~~v~---~v~~~~~~~----~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~--- 155 (401)
T PLN02409 86 KVVSFRIGQFSLLWIDQMQRLNFDVD---VVESPWGQG----ADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND--- 155 (401)
T ss_pred EEEEeCCCchhHHHHHHHHHcCCceE---EEECCCCCC----CCHHHHHHHHhhCcCCCccEEEEEeecccccccCC---
Confidence 99999988876542111 11111110 001111100 278999999974 25777777776666777765
Q ss_pred HHHHHHHH--HHHhCCEEEEeccccCCCCCCccccccccCCcccEEE--ecccCCCccceeeEEeCHHHHhhccCCCC--
Q 012368 268 FLQFLRDA--CDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMT--LAKPLAGGLPIGAALVTEKVASAINYGDH-- 341 (465)
Q Consensus 268 ~l~~l~~l--~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t--~sK~lg~G~~iG~v~~~~~i~~~~~~~~~-- 341 (465)
+++|.++ |+++|+++|+|++++ +|. .....+ ....|+++ .+|+++++.++|++++++++++.+.+...
T Consensus 156 -~~~i~~l~~~~~~g~~~vvD~v~s-~g~--~~id~~--~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~ 229 (401)
T PLN02409 156 -LAGVRKLLDCAQHPALLLVDGVSS-IGA--LDFRMD--EWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPR 229 (401)
T ss_pred -HHHHHHHHhhhccCcEEEEEcccc-cCC--cccccc--ccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCC
Confidence 7777777 999999999999987 432 112222 23456664 46999876789999999998877653210
Q ss_pred -------------cC---CCCChHHHHHHHHHHHHHhcC---chHHHHHHHHHHHHHHHHHHHHHcCCCcee--eeccce
Q 012368 342 -------------GS---TFAGSPLVCNAAIAVLDKISN---PAFLASVSKKGHYFKETLKQKLARNPHVKD--VRGLGL 400 (465)
Q Consensus 342 -------------~~---t~~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~~~~g~ 400 (465)
.+ .++.+...+.+..++++.+.+ +...++.+++.+++++.|.++ ....... ....+.
T Consensus 230 ~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~--g~~~~~~~~~~~s~~ 307 (401)
T PLN02409 230 VFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW--GLKLCTKKPEWRSDT 307 (401)
T ss_pred eecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--CCeeccCChhhcccc
Confidence 11 234555667778888887643 345556666666666666543 2211111 111234
Q ss_pred EEEEEec--CChHHHHHHHH-HCCceEeecC---CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 401 IIGIEFD--VSATPVVDACR-DSGLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 401 ~~~i~~~--~~~~~~~~~l~-~~Gv~v~~~~---~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
+.++.+. .+..++.+.|. +.|+.+..+. .+..+|++.....+++++..++++|++++.++.
T Consensus 308 v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 308 VTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred eEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 4556552 45567887776 5699988653 257899999889999999999999999998754
No 245
>PLN02651 cysteine desulfurase
Probab=99.85 E-value=1.3e-19 Score=180.08 Aligned_cols=312 Identities=16% Similarity=0.155 Sum_probs=192.0
Q ss_pred EEecccCcccccCCCCCHHHHHHHHHHHhhc-ccccC-CC-----CCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHH
Q 012368 100 YLDLSSGIAVNALGHGDADWIKAVVDQANVL-THVSN-MY-----YSIPQIELAKRLVACSF--ADRVFFSNTGTEANEA 170 (465)
Q Consensus 100 ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~-~~~~~-~~-----~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~ 170 (465)
|||..+. +..++.|.+++.+.+... ..... .. ......++++++++.++ .+.|+|++|+++|+..
T Consensus 2 Yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~ 75 (364)
T PLN02651 2 YLDMQAT------TPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNL 75 (364)
T ss_pred cccCcCC------CCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHH
Confidence 5665543 346789999998877542 11111 01 12225677888888887 5689999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC-----CCHHHHHhhcCCC
Q 012368 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-----GNIEATRKLIQPG 245 (465)
Q Consensus 171 al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~ 245 (465)
++..+..... .++++|++.+..|+........+. ... ..+..+|. -|++++++++++
T Consensus 76 ~l~~~~~~~~-------~~g~~vl~~~~~h~s~~~~~~~~~-~~g---------~~v~~v~~~~~~~~d~~~l~~~i~~- 137 (364)
T PLN02651 76 AIKGVMHFYK-------DKKKHVITTQTEHKCVLDSCRHLQ-QEG---------FEVTYLPVKSDGLVDLDELAAAIRP- 137 (364)
T ss_pred HHHHHHHhcc-------CCCCEEEEcccccHHHHHHHHHHH-hcC---------CEEEEEccCCCCcCCHHHHHHhcCC-
Confidence 9887643211 146788887766654332221111 000 11111221 278999999975
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccCCCccce
Q 012368 246 KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPI 323 (465)
Q Consensus 246 ~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~~i 323 (465)
++++|++..+++..|.+.+ +++|.++|++||+++++|.+|+ +|.. . ++...+.+|++++| |. +|+..+
T Consensus 138 ~t~lv~v~~~~n~tG~~~~----l~~I~~~~~~~g~~~~vD~a~~-~g~~--~--~~~~~~~~D~~~~s~hK~-~gp~G~ 207 (364)
T PLN02651 138 DTALVSVMAVNNEIGVIQP----VEEIGELCREKKVLFHTDAAQA-VGKI--P--VDVDDLGVDLMSISGHKI-YGPKGV 207 (364)
T ss_pred CcEEEEEECCCCCceeccc----HHHHHHHHHHcCCEEEEEcchh-hCCc--c--cCcccCCCCEEEechhhh-CCCCce
Confidence 4677788777777888776 9999999999999999999997 3321 1 22223446888776 84 545678
Q ss_pred eeEEeCHHHHhhccCCCCc-------CCCCChHHHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHHHHcCCCcee
Q 012368 324 GAALVTEKVASAINYGDHG-------STFAGSPLVCNAAIAVLDKISN--PAFLASVSKKGHYFKETLKQKLARNPHVKD 394 (465)
Q Consensus 324 G~v~~~~~i~~~~~~~~~~-------~t~~~~~~~~~aa~a~L~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 394 (465)
|+++++++..+.+.+...+ ...+.|..++.+..++|+.+.+ +...++.+++.+++++.|++.+........
T Consensus 208 g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~ 287 (364)
T PLN02651 208 GALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGP 287 (364)
T ss_pred EEEEEcCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECC
Confidence 9999998776666543211 1123456667777788887643 233444444555555544432111111111
Q ss_pred --e-eccceEEEEEec-CChHHHHHHHHHCCceEeecC----------------------CCCEEEEecCCCCcHHHHH
Q 012368 395 --V-RGLGLIIGIEFD-VSATPVVDACRDSGLLVLTAG----------------------KGNVVRLVPPLIISEQELD 447 (465)
Q Consensus 395 --~-~~~g~~~~i~~~-~~~~~~~~~l~~~Gv~v~~~~----------------------~~~~lRi~~~~~~t~e~i~ 447 (465)
. .....++.+.++ .+..++.+.|.+ |.+..+. ..+.+|++++..+|++|||
T Consensus 288 ~~~~~~~~~i~~~~~~~~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 288 RDPEKRYPGTLNLSFAYVEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred CCcccCcCCEEEEEeCCCCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 1 112445666663 466778888854 6664331 0258999999999999985
No 246
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.84 E-value=1.2e-18 Score=163.81 Aligned_cols=282 Identities=19% Similarity=0.155 Sum_probs=182.9
Q ss_pred CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCC
Q 012368 155 ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGN 234 (465)
Q Consensus 155 ~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 234 (465)
++++++++|++.|++..+-.+. +|++..+++.|.|.|+.......+|.......+ .-..+... +
T Consensus 146 P~~~Vv~~G~T~ane~l~fcLa-----------dpgdafLvPtPyY~gfdrdl~~rTgveivpv~c-~Ss~~f~i----t 209 (471)
T KOG0256|consen 146 PERVVVTNGATSANETLMFCLA-----------DPGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHC-SSSNGFQI----T 209 (471)
T ss_pred ccceEEecccchhhHHHHHHhc-----------CCCceeeecCCCCCcccccceeccCceEEEEEe-ecCCCccc----c
Confidence 7899999999999998776655 379999999999999976554443322111000 00011111 5
Q ss_pred HHHHHhhcC-----CCCe-EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC--CCCCCccccccc---
Q 012368 235 IEATRKLIQ-----PGKT-AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG--LGRTGYLWAHEH--- 303 (465)
Q Consensus 235 ~~~le~~l~-----~~~~-a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g--~gr~g~~~~~~~--- 303 (465)
.++||++++ +.++ .++|++|.||-|.+ .+++.|..+..+|.++++.||+||||++ |+..+-....+.
T Consensus 210 v~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~--~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~ 287 (471)
T KOG0256|consen 210 VEALEAALNQARKLGLKVKGVLITNPSNPLGTT--LSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKD 287 (471)
T ss_pred HHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCc--cCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhc
Confidence 788887775 2344 46677887777644 4889999999999999999999999998 433321111111
Q ss_pred cCCcccEE----EecccCCC-ccceeeEEeC-HHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhc-Cc----hHHHHHH
Q 012368 304 YGIFPDIM----TLAKPLAG-GLPIGAALVT-EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKIS-NP----AFLASVS 372 (465)
Q Consensus 304 ~~~~pdi~----t~sK~lg~-G~~iG~v~~~-~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~-~~----~~~~~~~ 372 (465)
....+|.+ ++||-+|- |+|+|.+... +++...... ...-...++..|.-....|..-+ .+ +..++++
T Consensus 288 ~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~k--mssf~~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~ 365 (471)
T KOG0256|consen 288 PHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATK--MSSFGLVSSQTQYLLASLLSDEEFTREYLRENNKRLR 365 (471)
T ss_pred cccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHH--HhhccCCcHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 11245533 78999994 9999999875 566655542 22223456777777666665310 01 2233444
Q ss_pred HHHHHHHHHHHHHHHcCCCceeeeccceEEEEEec--------CChHHHHHHHHHC-CceEeecC-----CCCEEEEecC
Q 012368 373 KKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFD--------VSATPVVDACRDS-GLLVLTAG-----KGNVVRLVPP 438 (465)
Q Consensus 373 ~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~--------~~~~~~~~~l~~~-Gv~v~~~~-----~~~~lRi~~~ 438 (465)
...+++.+.|+++ ++.--..+.|+|+|+++. ....++++.++++ ++.+.|+. .++|+|+.+.
T Consensus 366 ~rh~~~~~gLk~l----gI~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFA 441 (471)
T KOG0256|consen 366 IRHRYIVEGLKAL----GIPCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFA 441 (471)
T ss_pred HHHHHHHhhHHhc----CCceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEec
Confidence 4444555555443 433345678999999983 1234577788877 99999874 2589999765
Q ss_pred CCCcHHHHHHHHHHHHHHHHHhh
Q 012368 439 LIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 439 ~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
...++.++-+++||+.++.+..
T Consensus 442 -n~~~~t~~~am~Ri~~~~~~~~ 463 (471)
T KOG0256|consen 442 -NMSEETLEVAMRRLKQFLDSQV 463 (471)
T ss_pred -cCCHHHHHHHHHHHHHHHHhhh
Confidence 4466666669999999887543
No 247
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.83 E-value=4.7e-19 Score=176.04 Aligned_cols=287 Identities=18% Similarity=0.174 Sum_probs=187.9
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+..+.++...+|+++++++.+.+.+++++||++|+..+++.+.. ++++|++..+.|++.........
T Consensus 34 y~r~~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~-----------~gd~Vl~~~~~y~~~~~~~~~~~-- 100 (369)
T cd00614 34 YSRIGNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLK-----------AGDHVVASDDLYGGTYRLFERLL-- 100 (369)
T ss_pred eECCCChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcC-----------CCCEEEECCCCcchHHHHHHHHH--
Confidence 45567788999999999999888889999999999999987652 68899999999877542211110
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
......+.+++.+|++++++++++ ++++|++|..+++.|.+.+ +++|.++|++||+++|+|+++...
T Consensus 101 -------~~~g~~~~~v~~~d~~~l~~~i~~-~~~~v~~e~~~np~g~~~d----l~~i~~la~~~g~~livD~t~~~~- 167 (369)
T cd00614 101 -------PKLGIEVTFVDPDDPEALEAAIKP-ETKLVYVESPTNPTLKVVD----IEAIAELAHEHGALLVVDNTFATP- 167 (369)
T ss_pred -------hhcCeEEEEeCCCCHHHHHHhcCC-CCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcch-
Confidence 011134556777789999999975 5778888887777777665 999999999999999999998632
Q ss_pred CCCccccccccCCcccEE--EecccCCC-c-cceeeEEeCH-HHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHH
Q 012368 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-G-LPIGAALVTE-KVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFL 368 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~--t~sK~lg~-G-~~iG~v~~~~-~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~ 368 (465)
.. ........|++ +++|.++| | .+.|++++++ ++++.+...........+|+.+++++..|+.+ +...
T Consensus 168 ~~-----~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl--~~r~ 240 (369)
T cd00614 168 YL-----QRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKTL--PLRM 240 (369)
T ss_pred hc-----CChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCCH--HHHH
Confidence 11 11122345666 67899986 5 7899999987 88777754322233456777776665555422 2345
Q ss_pred HHHHHHHHHHHHHHHHHHH----cCCCce----------eeeccceEEEEEecCChHHHHHHHHHCCceE----------
Q 012368 369 ASVSKKGHYFKETLKQKLA----RNPHVK----------DVRGLGLIIGIEFDVSATPVVDACRDSGLLV---------- 424 (465)
Q Consensus 369 ~~~~~~~~~l~~~l~~~~~----~~~~~~----------~~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v---------- 424 (465)
++..++..++.+.|++... .+|... ...+.|.++.+++.....+..+.+..-.++.
T Consensus 241 ~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~s 320 (369)
T cd00614 241 ERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVES 320 (369)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcceEcccCCCCce
Confidence 5666666666666554210 012110 1235688999998433333333332223321
Q ss_pred ---eec---------------C-CCCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 425 ---LTA---------------G-KGNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 425 ---~~~---------------~-~~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
.|. | .++.+|+++.+ |+.+.+++.|++++
T Consensus 321 l~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl----E~~~dl~~dl~~al 368 (369)
T cd00614 321 LVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQAL 368 (369)
T ss_pred eeeCCcccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 010 1 13579998776 56777777777765
No 248
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.83 E-value=9.4e-18 Score=166.11 Aligned_cols=322 Identities=13% Similarity=0.072 Sum_probs=188.0
Q ss_pred EEEecccCcccccCCC--CCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHH
Q 012368 99 EYLDLSSGIAVNALGH--GDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFAR 176 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh--~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~ 176 (465)
.+|...+.. ..||- .+++|++++.+.++.+ ....+...+++++++++++.+++++++|+++|+.++++.+.
T Consensus 9 ~~ina~g~~--t~~g~s~~~~~v~~a~~~~~~~~-----~~~~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al~al~ 81 (363)
T TIGR01437 9 KVINASGKM--TILGVSTVSDEVADAQKRGAQNY-----FEIKELVNKTGEYIANLLGVEDAVIVSSASAGIAQSVAAVI 81 (363)
T ss_pred eEEECCcEe--ecCCCCCCCHHHHHHHHHHHhcC-----CCHHHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHHHHHh
Confidence 444444433 34554 5889999999987542 12335578899999999998899999999999999999775
Q ss_pred HHhhh------cCCCCCCCCceEEEEcCCcccCc---cccccccC-CCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCC
Q 012368 177 KFQRH------SNPDSKEPATEFVSFTNSFHGRT---MGALALTS-KEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGK 246 (465)
Q Consensus 177 ~~t~~------~~~~~~~~~~~ii~~~~~yhg~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~ 246 (465)
.- +. .... .-+++.||+..|.|..+. ...+.+.+ .+.+. .. . ...|++++++++++++
T Consensus 82 ~~-Gd~~~~~~~~~s-~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v----~~--~----~~~d~~~le~ai~~~t 149 (363)
T TIGR01437 82 TR-GNRYLVENLHDS-KIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEA----GY--A----NECSAEQLEAAITEKT 149 (363)
T ss_pred cC-CCcchhhccccc-ccccceEEEECccchhcCCchHHHHHhcCCeEEEE----cC--C----CCCCHHHHHHhcChhc
Confidence 21 00 0000 002347888887775442 11112222 11111 10 0 1138999999998654
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccCCCcccee
Q 012368 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIG 324 (465)
Q Consensus 247 ~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~~iG 324 (465)
.++++++..++..|.+.+ +++|.++|++||+++|+|++|. . ... ....++ .|++++| |+++ |++.|
T Consensus 150 ~ai~~v~~~~~~~g~~~~----~~~i~~~a~~~gi~vivD~a~~-~--~~~--~~~~~g--~D~~~~S~~K~l~-gp~~G 217 (363)
T TIGR01437 150 AAILYIKSHHCVQKSMLS----VEDAAQVAQEHNLPLIVDAAAE-E--DLQ--KYYRLG--ADLVIYSGAKAIE-GPTSG 217 (363)
T ss_pred eEEEEEecCCCCcCCcCC----HHHHHHHHHHcCCeEEEECCCC-C--chH--HHHHcC--CCEEEEeCCcccC-CCceE
Confidence 444434433333454444 7899999999999999999996 2 111 011123 4777654 9885 55699
Q ss_pred eEEeCHHHHhhccCCCCc--CCCCChHHHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHHHHcCCCceee---ec
Q 012368 325 AALVTEKVASAINYGDHG--STFAGSPLVCNAAIAVLDKISN--PAFLASVSKKGHYFKETLKQKLARNPHVKDV---RG 397 (465)
Q Consensus 325 ~v~~~~~i~~~~~~~~~~--~t~~~~~~~~~aa~a~L~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~ 397 (465)
++++++++++.+....++ ..+......+++..++++.+.+ .+..+...++.+++++.|.+ .+.+... ..
T Consensus 218 ~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~----i~g~~~~~~~~~ 293 (363)
T TIGR01437 218 LVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNT----LKGVSASIVQDE 293 (363)
T ss_pred EEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhc----CCCeEEEEecCC
Confidence 999998888766432211 1111112234444445554422 23344444444455555544 3332221 11
Q ss_pred cc-----eEEEEEe---cCChHHHHHHHHHCC--ceEeec-CCCCEEEEecCCCCcHHHHHHHHHHHHHH
Q 012368 398 LG-----LIIGIEF---DVSATPVVDACRDSG--LLVLTA-GKGNVVRLVPPLIISEQELDQAVEILCKT 456 (465)
Q Consensus 398 ~g-----~~~~i~~---~~~~~~~~~~l~~~G--v~v~~~-~~~~~lRi~~~~~~t~e~i~~~l~~l~~~ 456 (465)
.+ ..+.++. +.+..++.+.|.++| |.+++. ...+.+|+.+. +.+++|++.++++|++.
T Consensus 294 ~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~-~~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 294 AGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPR-SVTGGQLDIIVERIREI 362 (363)
T ss_pred CCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEee-cCCHHHHHHHHHHHHHh
Confidence 11 1122332 245788999998877 555431 12367888877 46799999999999875
No 249
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.83 E-value=1.6e-18 Score=162.56 Aligned_cols=324 Identities=19% Similarity=0.208 Sum_probs=198.7
Q ss_pred EecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhh
Q 012368 101 LDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQR 180 (465)
Q Consensus 101 lD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~ 180 (465)
+||.|..++ | ++|++++|+.++-.. ....++.++...++++++++.++.+.++|++|||.||..++....+
T Consensus 2 ~~f~SDn~~---g-~~~~m~eam~~a~~~--~~~~YG~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~--- 72 (342)
T COG2008 2 IDFRSDNVA---G-PTPEMREALAAANAV--GDDVYGEDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHCQ--- 72 (342)
T ss_pred CccccCccC---C-CCHHHHHHHHhcccc--CCCCCCCCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhcC---
Confidence 577776553 3 789999999886532 1223345666889999999999999999999999999999997662
Q ss_pred hcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCC-CCCCC--CceEeeCCCHHHHHhhcCCC-----CeEEEEE
Q 012368 181 HSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPF-EPVMP--GVNFVEYGNIEATRKLIQPG-----KTAAVFV 252 (465)
Q Consensus 181 ~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~d~~~le~~l~~~-----~~a~vi~ 252 (465)
++..|| ..+.-|-++...-. ...+.... .+..+ +.. -++++++..+..+ .+..++.
T Consensus 73 --------~~~~vi-~~~~aHi~~~E~Ga---~~~~~~~~~~~~~~g~~Gk----lt~e~v~~~i~~~d~~~~~~~~~~~ 136 (342)
T COG2008 73 --------PGESVI-CHETAHIYTDECGA---PEFFGGGQKLPIVPGADGK----LTPEDVEAAIRPDDIHHAPTPLAVL 136 (342)
T ss_pred --------CCCeEE-EeccccceecccCc---HHHHcCCceeccCCCCCCC----cCHHHHHHhhcCCCcccCCCceEEE
Confidence 444444 44555655532211 00000000 01111 111 1789999987622 3445555
Q ss_pred cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC--CCCCCccccccccCCcccEEEecccCCCccceeeEE-eC
Q 012368 253 EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG--LGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAAL-VT 329 (465)
Q Consensus 253 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g--~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~-~~ 329 (465)
+....++|. +++.++|++|.++|++||+.|+.|-+--. .-..| .....+....|+++|+-+-++|+|+|+++ ++
T Consensus 137 e~~~te~Gt-Vy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg--~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn 213 (342)
T COG2008 137 ENTATEGGT-VYPLDELEAISAVCKEHGLPLHMDGARLANALVALG--VALKTIKSYVDSVSFCLTKGGGAPVGAIVFGN 213 (342)
T ss_pred eeccCCCce-ecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC--CCHHHHHhhCCEEEEecccCCcceeeeEEEcC
Confidence 554447775 57899999999999999999999975211 10111 12222333568887765556677888876 57
Q ss_pred HHHHhhccCC--CCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEec
Q 012368 330 EKVASAINYG--DHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFD 407 (465)
Q Consensus 330 ~~i~~~~~~~--~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~ 407 (465)
+++++.+... ..++-+.-..+-.+++..+|+.---.....+.+++..+|.+.+... .+.....+...+++.+.++
T Consensus 214 ~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~---~G~~~~~~~~tN~vf~~l~ 290 (342)
T COG2008 214 RDFAKRARRWRKRAGGLMRKARFLAAQGLYALEDDVWRLAADHANAMAARLAEGLEAK---PGVKLAFPVETNMVFVRLP 290 (342)
T ss_pred HHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhc---CCceeccCCcccEEEEECC
Confidence 8888776432 3455565566666666666652100111122233355555555432 1222233357788888774
Q ss_pred CC---hHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 408 VS---ATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 408 ~~---~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
.. .......+...|+++.+.+ ..+||..++.++++++++++..+++++
T Consensus 291 ~~~i~~l~~~~~~~~~~~~~~~~~--~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 291 ESAIEALRLAGALFYRGVLIGAHG--EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred hHHHHHHHhhchhheeeeeccCCC--ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 21 2223334445566665433 479999999999999999999988754
No 250
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.83 E-value=2.5e-18 Score=173.34 Aligned_cols=325 Identities=18% Similarity=0.156 Sum_probs=186.7
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHh-hcccc---cCCC-CCHHH---HH-HHHHHHhhcCCCe-EEecCCHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQAN-VLTHV---SNMY-YSIPQ---IE-LAKRLVACSFADR-VFFSNTGTEA 167 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~-~~~~~---~~~~-~~~~~---~~-la~~l~~~~~~~~-v~~~~sG~eA 167 (465)
+++|.+..+-. + -+|.|++++.+.+. +...+ ...+ ..+.. ++ .++.+++.++.+. .++.+||++|
T Consensus 19 ~~~~~~~~~~~--~---~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~a 93 (402)
T cd00378 19 RETLELIASEN--F---TSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPHSGSQA 93 (402)
T ss_pred HhCeeeeccCC--c---CCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecCCcHHH
Confidence 34566654422 2 37999999987652 32111 1111 22222 22 3345667777332 2344578999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccc----cccCCCCcCCCCCCCCCCc-eEeeCCCHHHHHhhc
Q 012368 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGAL----ALTSKEHYRSPFEPVMPGV-NFVEYGNIEATRKLI 242 (465)
Q Consensus 168 ~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~le~~l 242 (465)
+..+++.... ++++|++.++.|.++..... ...+.... ..+...+. .. .-|++++++++
T Consensus 94 ~~~~l~~l~~-----------~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~--~id~~~l~~~i 157 (402)
T cd00378 94 NLAVYFALLE-----------PGDTIMGLDLSHGGHLTHGSFTKVSASGKLFE---SVPYGVDPETG--LIDYDALEKMA 157 (402)
T ss_pred HHHHHHHhcC-----------CCCEEEEecCccCccccccccccccccceeEE---EecCCcCcccC--CcCHHHHHHHH
Confidence 9998887642 68899999999976643311 11111000 00110100 00 12899999998
Q ss_pred CCCCeEEEEE-cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCCCCCCc-cccccccCCcccEE--EecccC
Q 012368 243 QPGKTAAVFV-EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQ-CGLGRTGY-LWAHEHYGIFPDIM--TLAKPL 317 (465)
Q Consensus 243 ~~~~~a~vi~-ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~gr~g~-~~~~~~~~~~pdi~--t~sK~l 317 (465)
...++.++++ .|+++ ...+ +++|.++|++||+++|+||+| .|+...|. ..... ..|++ +++|++
T Consensus 158 ~~~~~~~v~~~~~~~~---~~~~----~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~----~~dv~~~s~sK~l 226 (402)
T cd00378 158 LEFKPKLIVAGASAYP---RPID----FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP----GADVVTTTTHKTL 226 (402)
T ss_pred HhCCCCEEEecCcccC---CCcC----HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc----CCcEEEeccccCC
Confidence 6334445554 55432 2333 889999999999999999996 44422232 11111 24554 678999
Q ss_pred CCccceeeEEeCH-HHHhhccCCCCcCCCCCh-HHHHHHHHHHHHHhcC---chHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 012368 318 AGGLPIGAALVTE-KVASAINYGDHGSTFAGS-PLVCNAAIAVLDKISN---PAFLASVSKKGHYFKETLKQKLARNPHV 392 (465)
Q Consensus 318 g~G~~iG~v~~~~-~i~~~~~~~~~~~t~~~~-~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 392 (465)
+|+|+|++++++ ++++.+........++.+ +..++++..++..... +++.++++++.+++.+.|.+ ++..
T Consensus 227 -~G~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~ 301 (402)
T cd00378 227 -RGPRGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKE----RGFK 301 (402)
T ss_pred -CCCCceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHh----CCCe
Confidence 568999999976 888777532222222222 2333333334443322 34455566666666665554 3321
Q ss_pred ee-eeccceEEEEEec---CChHHHHHHHHHCCceEeec----C-----CCCEEEEecCCC----CcHHHHHHHHHHHHH
Q 012368 393 KD-VRGLGLIIGIEFD---VSATPVVDACRDSGLLVLTA----G-----KGNVVRLVPPLI----ISEQELDQAVEILCK 455 (465)
Q Consensus 393 ~~-~~~~g~~~~i~~~---~~~~~~~~~l~~~Gv~v~~~----~-----~~~~lRi~~~~~----~t~e~i~~~l~~l~~ 455 (465)
.. .+..+.++|+.++ .....+.+.|.++||.+.+. . ....+|++++.. ++++|++++++.|++
T Consensus 302 ~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~ 381 (402)
T cd00378 302 VVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIAR 381 (402)
T ss_pred EeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHH
Confidence 11 1234677778774 23456777788889999632 1 125789977653 479999999999999
Q ss_pred HHHH
Q 012368 456 TLPV 459 (465)
Q Consensus 456 ~l~~ 459 (465)
++++
T Consensus 382 ~~~~ 385 (402)
T cd00378 382 ALKD 385 (402)
T ss_pred HHhc
Confidence 8764
No 251
>PRK14012 cysteine desulfurase; Provisional
Probab=99.82 E-value=1.3e-17 Score=168.02 Aligned_cols=326 Identities=16% Similarity=0.147 Sum_probs=190.8
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHh--h-cccccCCCC------CHHHHHHHHHHHhhcC--CCeEEecCCHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQAN--V-LTHVSNMYY------SIPQIELAKRLVACSF--ADRVFFSNTGTE 166 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~--~-~~~~~~~~~------~~~~~~la~~l~~~~~--~~~v~~~~sG~e 166 (465)
+.|+|..+. +..++.+.+++.+.+. . ......... .+...++++++++.++ .+.|++++||++
T Consensus 4 ~iyld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~ 77 (404)
T PRK14012 4 PIYLDYSAT------TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATE 77 (404)
T ss_pred eEEecCcCC------CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHH
Confidence 468886653 3477899999988775 2 111111000 1235677888998888 467999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccc--cCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCC
Q 012368 167 ANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALAL--TSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP 244 (465)
Q Consensus 167 A~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~ 244 (465)
|+..+++.+..+.. .+++.|++.++.|+........+ .+... .+.+..++.. .|+++|++++++
T Consensus 78 al~~~l~~l~~~~~-------~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~---~~v~~~~~g~----~d~~~l~~~i~~ 143 (404)
T PRK14012 78 SDNLAIKGAAHFYQ-------KKGKHIITSKTEHKAVLDTCRQLEREGFEV---TYLDPQSNGI----IDLEKLEAAMRD 143 (404)
T ss_pred HHHHHHHHHHHhhc-------CCCCEEEEecCccHHHHHHHHHHHhCCCEE---EEEccCCCCc----CCHHHHHHhcCC
Confidence 99999887643211 15788888888775543322111 11110 0011111110 288999999975
Q ss_pred CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccCCCccc
Q 012368 245 GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLP 322 (465)
Q Consensus 245 ~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~~ 322 (465)
++++|++..+++.+|.+.+ +++|.++|+++|+++|+|++++ +|... .+.....+|++++| |.+|. .+
T Consensus 144 -~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~vivD~a~~-~g~~~----~~~~~~~~D~~~~s~~K~~gp-~g 212 (404)
T PRK14012 144 -DTILVSIMHVNNEIGVIQD----IAAIGEICRERGIIFHVDAAQS-VGKVP----IDLSKLKVDLMSFSAHKIYGP-KG 212 (404)
T ss_pred -CCEEEEEECcCCCccchhh----HHHHHHHHHHcCCEEEEEcchh-cCCcc----cCcccCCCCEEEEehhhccCC-Cc
Confidence 4567777777777777765 8999999999999999999986 43221 11223457888877 96653 36
Q ss_pred eeeEEeCHHHHhhccCCCCcC-------CCCChHHHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHHHHcCCCce
Q 012368 323 IGAALVTEKVASAINYGDHGS-------TFAGSPLVCNAAIAVLDKISN--PAFLASVSKKGHYFKETLKQKLARNPHVK 393 (465)
Q Consensus 323 iG~v~~~~~i~~~~~~~~~~~-------t~~~~~~~~~aa~a~L~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 393 (465)
+|+++++++....+.+...+. ....+.....+..++++.+.. +...++.+++.+++.+.| ..++.+.
T Consensus 213 ~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L----~~~~~i~ 288 (404)
T PRK14012 213 IGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGI----KDIEEVY 288 (404)
T ss_pred eEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH----hcCCCEE
Confidence 888888776443343311111 111233333333355554322 223344444444444444 4444222
Q ss_pred ee-----eccce-EEEEEecCChHHHHHHHHHCCceEeec-----------------C-----CCCEEEEecCCCCcHHH
Q 012368 394 DV-----RGLGL-IIGIEFDVSATPVVDACRDSGLLVLTA-----------------G-----KGNVVRLVPPLIISEQE 445 (465)
Q Consensus 394 ~~-----~~~g~-~~~i~~~~~~~~~~~~l~~~Gv~v~~~-----------------~-----~~~~lRi~~~~~~t~e~ 445 (465)
.. +..+. .+++.+ .+..++...|. ++.+..+ + ..+.+|++++...|++|
T Consensus 289 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~d 365 (404)
T PRK14012 289 LNGDLEQRVPGNLNVSFNY-VEGESLIMALK--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEE 365 (404)
T ss_pred EeCCccccCCCEEEEEEeC-cCHHHHHHhCC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHH
Confidence 11 11122 233332 23345666654 3333221 0 12679999999999999
Q ss_pred HHHHHHHHHHHHHHhh
Q 012368 446 LDQAVEILCKTLPVLD 461 (465)
Q Consensus 446 i~~~l~~l~~~l~~~~ 461 (465)
++++++.|+++++.++
T Consensus 366 vd~~~~~l~~~~~~~~ 381 (404)
T PRK14012 366 IDYAIELVRKSIGKLR 381 (404)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999987763
No 252
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.82 E-value=3.7e-18 Score=170.71 Aligned_cols=335 Identities=14% Similarity=0.115 Sum_probs=196.9
Q ss_pred CCCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHH
Q 012368 96 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFA 175 (465)
Q Consensus 96 dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a 175 (465)
-|..||||.+-.++ ..+.++..+++..... .+..+....+|++.++++++.+.+++++||++|+.+++++.
T Consensus 18 ~~~v~iDlltds~t-------~ams~~~~~a~~~gd~--~Y~~~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~al 88 (431)
T cd00617 18 SEDVYIDLLTDSGT-------GAMSDYQWAAMMLGDE--AYAGSKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFSIL 88 (431)
T ss_pred CCCcCCCCCCCCCc-------HHHHHHHHHHHHhCCC--ccCCCCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHHh
Confidence 46678999886553 2344555555543222 22334447799999999999999999999999999998866
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC---CCHHHHHhhcCCC---CeEE
Q 012368 176 RKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY---GNIEATRKLIQPG---KTAA 249 (465)
Q Consensus 176 ~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~le~~l~~~---~~a~ 249 (465)
.. ++|.| ..+++|..+...+...++.+.+...-....+. ...|+ -|+++|+++++++ .+++
T Consensus 89 ~~-----------pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~-~~~pf~gniD~e~Le~~I~~~~~~~~~~ 155 (431)
T cd00617 89 LK-----------PGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQ-ELIPFKGNIDVAKLEKLIDEVGAENIPY 155 (431)
T ss_pred CC-----------CCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccc-cccCCCCCcCHHHHHHHhCcccCCCccE
Confidence 42 57765 57777766654444444444322110000000 01122 2899999999843 3555
Q ss_pred EEE-cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC----C------CCCCcccc---ccccCCcccEEEec-
Q 012368 250 VFV-EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG----L------GRTGYLWA---HEHYGIFPDIMTLA- 314 (465)
Q Consensus 250 vi~-ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g----~------gr~g~~~~---~~~~~~~pdi~t~s- 314 (465)
|++ .|+|+.+|. +.+.+.+++|+++|++||++||.|+++.- | |+.+.... .+.+. .-|..++|
T Consensus 156 I~v~~p~N~~gG~-~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s-~sd~~~mS~ 233 (431)
T cd00617 156 IVLTITNNTAGGQ-PVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFS-YADGCTMSA 233 (431)
T ss_pred EEEECCcCCCCCc-cCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhc-cCCEEEEEe
Confidence 555 466666564 56899999999999999999999999541 1 11111100 00000 12334433
Q ss_pred -ccCCCccc-eeeEEeCH-HHHhhccCC----CCcCCCCC-hHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Q 012368 315 -KPLAGGLP-IGAALVTE-KVASAINYG----DHGSTFAG-SPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKL 386 (465)
Q Consensus 315 -K~lg~G~~-iG~v~~~~-~i~~~~~~~----~~~~t~~~-~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~ 386 (465)
|..+ .+ .|++++++ ++++.++.. ....++++ +...++|...+|+...+.+.+++..+..+++.+.|.+.
T Consensus 234 ~K~~~--~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~l~~~~~~r~~l~~~L~~~- 310 (431)
T cd00617 234 KKDGL--VNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRVEQVRYLGDRLDEA- 310 (431)
T ss_pred ecCCC--CccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-
Confidence 3222 23 45888876 588777531 11223333 33333443336664323333444444445565555554
Q ss_pred HcCCCceeeeccceEEEEEecC----------ChHHHHHHHH-HCCceEeecC----------------CCCEEEEecCC
Q 012368 387 ARNPHVKDVRGLGLIIGIEFDV----------SATPVVDACR-DSGLLVLTAG----------------KGNVVRLVPPL 439 (465)
Q Consensus 387 ~~~~~~~~~~~~g~~~~i~~~~----------~~~~~~~~l~-~~Gv~v~~~~----------------~~~~lRi~~~~ 439 (465)
.+|. ..+..|.+++++.+. ++.+++.+|+ +.||.+...| .-..+|+.+|-
T Consensus 311 -G~~v--~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~pr 387 (431)
T cd00617 311 -GVPI--VEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPR 387 (431)
T ss_pred -CCCc--cCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccc
Confidence 3332 223445666676531 3677886666 5678764311 01569998874
Q ss_pred -CCcHHHHHHHHHHHHHHHHHh
Q 012368 440 -IISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 440 -~~t~e~i~~~l~~l~~~l~~~ 460 (465)
..|.++++.+.++|..++++.
T Consensus 388 r~~t~~~~~~~~~~~~~~~~~~ 409 (431)
T cd00617 388 RVYTQDHMDYVAAAVIALYERR 409 (431)
T ss_pred cccCHHHHHHHHHHHHHHHhhH
Confidence 669999999999999888764
No 253
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.82 E-value=2.1e-17 Score=167.36 Aligned_cols=329 Identities=16% Similarity=0.124 Sum_probs=187.5
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHh-hccccc--CCC--CCHHHHHHH----HHHHhhcCCCeE-EecCCHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQAN-VLTHVS--NMY--YSIPQIELA----KRLVACSFADRV-FFSNTGTEA 167 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~-~~~~~~--~~~--~~~~~~~la----~~l~~~~~~~~v-~~~~sG~eA 167 (465)
+.+|++.++-.. -+|.|++|+...+. ....+. ..+ ..+....++ +++++.++.+.. ++++||++|
T Consensus 25 ~~~~~l~~~~n~-----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt~a 99 (416)
T PRK00011 25 EEHIELIASENF-----VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQPHSGSQA 99 (416)
T ss_pred hcCeeeecccCc-----CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeeecCCchHH
Confidence 345666665332 47999999877653 211111 111 122233333 377888873322 344568999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccc--cccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCC
Q 012368 168 NEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGAL--ALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPG 245 (465)
Q Consensus 168 ~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~ 245 (465)
+..+++.+. .++++|++.+++|.++..... .... ........+...+. ...|+++++++++..
T Consensus 100 l~~~l~~l~-----------~~gd~Vl~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~---~~~d~~~l~~~i~~~ 164 (416)
T PRK00011 100 NAAVYFALL-----------KPGDTILGMDLAHGGHLTHGSPVNFSG-KLYNVVSYGVDEET---GLIDYDEVEKLALEH 164 (416)
T ss_pred HHHHHHHhc-----------CCCCEEEEeccccCCcccccccccccc-ceeeEeecCcCccc---CCcCHHHHHHHHHhc
Confidence 998888664 168899999999866432111 1111 00000011111110 013899999999643
Q ss_pred CeEEEEEc-ccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEE--EecccCCCccc
Q 012368 246 KTAAVFVE-PIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAGGLP 322 (465)
Q Consensus 246 ~~a~vi~e-p~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~--t~sK~lg~G~~ 322 (465)
++++|++. +++ |...+ +++|.++|++||+++|+|++|. +|..+........+ ..|++ +++|++ +|.+
T Consensus 165 ~~k~v~~~~~~~---~~~~~----~~~I~~la~~~~~~livD~a~~-~g~~~~g~~~~~~~-~~di~~~S~~K~l-~g~~ 234 (416)
T PRK00011 165 KPKLIIAGASAY---SRPID----FKRFREIADEVGAYLMVDMAHI-AGLVAAGVHPSPVP-HADVVTTTTHKTL-RGPR 234 (416)
T ss_pred CCCEEEECCCcC---CCccC----HHHHHHHHHHcCCEEEEECcch-hcccccCccCCCCC-CCcEEEecCCcCC-CCCC
Confidence 45566653 333 33333 8999999999999999999975 22221110000111 24555 578998 4678
Q ss_pred eeeEEeC-HHHHhhccCCCCcCCCCC-hHHHHHHHHHHH-HHhcC--chHHHHHHHHHHHHHHHHHHHHHcCCCceeeec
Q 012368 323 IGAALVT-EKVASAINYGDHGSTFAG-SPLVCNAAIAVL-DKISN--PAFLASVSKKGHYFKETLKQKLARNPHVKDVRG 397 (465)
Q Consensus 323 iG~v~~~-~~i~~~~~~~~~~~t~~~-~~~~~~aa~a~L-~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 397 (465)
.|+++++ +++++.+........++. ....+++...++ +.+.+ ++..++++++.+++++.|.++ .+.... -..
T Consensus 235 gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~-~~~ 311 (416)
T PRK00011 235 GGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER--GFRVVS-GGT 311 (416)
T ss_pred ceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC--CCeeee-cCC
Confidence 9999995 688877753322222322 222333333333 33321 445677777777777777653 221111 112
Q ss_pred cceEEEEEec-C--ChHHHHHHHHHCCceEeecC---------CCCEEEEecC----CCCcHHHHHHHHHHHHHHHHH
Q 012368 398 LGLIIGIEFD-V--SATPVVDACRDSGLLVLTAG---------KGNVVRLVPP----LIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 398 ~g~~~~i~~~-~--~~~~~~~~l~~~Gv~v~~~~---------~~~~lRi~~~----~~~t~e~i~~~l~~l~~~l~~ 459 (465)
...++++.++ . ...++.+.|.++||.+.... ....+|+... ..++++|++++++.|++++..
T Consensus 312 ~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 312 DNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred CCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 3466777763 2 45678888999999987321 1245888432 256899999999999998765
No 254
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.81 E-value=2.5e-18 Score=169.71 Aligned_cols=281 Identities=17% Similarity=0.092 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHhhcCC----CeEEecCCHHHHHHHHHHHHHHHhhhcCC--CCCCCCceEEEEcCCcccCccccccccCC
Q 012368 140 IPQIELAKRLVACSFA----DRVFFSNTGTEANEAAIKFARKFQRHSNP--DSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 140 ~~~~~la~~l~~~~~~----~~v~~~~sG~eA~~~al~~a~~~t~~~~~--~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
..+++++++++++++. +.++||+||++|+..++++++........ ...++++.+|+.+...|..........+.
T Consensus 38 ~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~ 117 (345)
T cd06450 38 EMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDV 117 (345)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHhc
Confidence 3466777778887773 37999999999999999988743210000 00001233555555555544333222111
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCC-----CCeEEE-EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEec
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQP-----GKTAAV-FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDE 287 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-----~~~a~v-i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DE 287 (465)
.... .+..++. ..|+++|++++++ .++.+| ++.|.++ .|.+.+ +++|.++|++||+++|+|+
T Consensus 118 ~~~~---v~~~~~~----~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~-tG~~~~----~~~i~~~~~~~~~~l~vD~ 185 (345)
T cd06450 118 KVRL---VPVDEDG----RMDPEALEAAIDEDKAEGLNPIMVVATAGTTD-TGAIDP----LEEIADLAEKYDLWLHVDA 185 (345)
T ss_pred CeEE---eeeCCCC----CcCHHHHHHHHHHHHHCCCCcEEEEEecccCC-CCCCCC----HHHHHHHHHHhCCeEEEec
Confidence 1111 1111111 1388999998863 134444 4455444 565544 8999999999999999999
Q ss_pred cccCCCCCCccccccccCC-cccEE--EecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcC
Q 012368 288 VQCGLGRTGYLWAHEHYGI-FPDIM--TLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN 364 (465)
Q Consensus 288 v~~g~gr~g~~~~~~~~~~-~pdi~--t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~ 364 (465)
+|.++.............. ..|.+ +++|+++++.++|+++.+ .+++.+++..+....-
T Consensus 186 a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~-------------------~~~~~~~l~~l~~~g~ 246 (345)
T cd06450 186 AYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR-------------------ALKLWATLRRFGRDGY 246 (345)
T ss_pred hhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH-------------------HHHHHHHHHHHhHHHH
Confidence 9975422111000000111 34654 467988877888887655 3333344333332111
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHcCCCceee-eccceEEEEEecC------ChHHHHHHHHHCCceEeecC---CCCEEE
Q 012368 365 PAFLASVSKKGHYFKETLKQKLARNPHVKDV-RGLGLIIGIEFDV------SATPVVDACRDSGLLVLTAG---KGNVVR 434 (465)
Q Consensus 365 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~i~~~~------~~~~~~~~l~~~Gv~v~~~~---~~~~lR 434 (465)
++..++..++.+++.+.| .+.+.+..+ ...+.++.+.+.. ...++.+.|.++|+++.+.. .+.++|
T Consensus 247 ~~~~~~~~~~~~~l~~~L----~~~~~~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lR 322 (345)
T cd06450 247 GEHIDRIVDLAKYLAELI----RADPGFELLGEPNLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTLGGPNVLR 322 (345)
T ss_pred HHHHHHHHHHHHHHHHHH----hcCCCeEEecCCceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEE
Confidence 334444555555555544 344433222 2345566666532 34578899999976554321 236899
Q ss_pred EecCCCC-cHHHHHHHHHHHHH
Q 012368 435 LVPPLII-SEQELDQAVEILCK 455 (465)
Q Consensus 435 i~~~~~~-t~e~i~~~l~~l~~ 455 (465)
++++..+ |++|++++++.|++
T Consensus 323 is~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 323 FVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred EEecCCCCCHHHHHHHHHHHHh
Confidence 9998765 99999999999875
No 255
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.80 E-value=1.7e-17 Score=164.30 Aligned_cols=297 Identities=19% Similarity=0.181 Sum_probs=185.3
Q ss_pred HHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCc
Q 012368 121 KAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSF 200 (465)
Q Consensus 121 ~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~y 200 (465)
+++.+.+.+..+ +..+...++++.++++++.+.+++++||++|+..+++.+.. .++++|++..++|
T Consensus 3 ~~~~~~~~~~~~----~~~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~----------~~gd~vl~~~~~~ 68 (352)
T cd00616 3 EAVEEVLDSGWL----TLGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGI----------GPGDEVIVPSFTF 68 (352)
T ss_pred HHHHHHHHcCCc----cCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCC----------CCCCEEEeCCcch
Confidence 455666554322 33456889999999999988899999999999999986631 1578999999999
Q ss_pred ccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC
Q 012368 201 HGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAG 280 (465)
Q Consensus 201 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g 280 (465)
++........+....+ .+..... ...|++++++.+++ ++++|++... .|...+ +++|.++|+++|
T Consensus 69 ~~~~~~~~~~g~~~~~----~~~~~~~---~~~d~~~l~~~i~~-~~~~v~~~~~---~G~~~~----~~~i~~l~~~~~ 133 (352)
T cd00616 69 VATANAILLLGATPVF----VDIDPDT---YNIDPELIEAAITP-RTKAIIPVHL---YGNPAD----MDAIMAIAKRHG 133 (352)
T ss_pred HHHHHHHHHcCCeEEE----EecCCCc---CCcCHHHHHHhcCc-CCeEEEEECC---CCCcCC----HHHHHHHHHHcC
Confidence 8776544333222111 1111100 01278999999864 5667766542 454444 899999999999
Q ss_pred CEEEEeccccCCCCCCccccccccCCcccEEEec----ccCCCccceeeEEeC-HHHHhhccCC----C-----------
Q 012368 281 ALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA----KPLAGGLPIGAALVT-EKVASAINYG----D----------- 340 (465)
Q Consensus 281 ~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s----K~lg~G~~iG~v~~~-~~i~~~~~~~----~----------- 340 (465)
+++|+|++|+ +|... .....+...|+.++| |.+++| +.|+++.+ +++.+.+... .
T Consensus 134 i~li~D~a~~-~g~~~---~~~~~~~~~d~~~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (352)
T cd00616 134 LPVIEDAAQA-LGATY---KGRKVGTFGDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEI 208 (352)
T ss_pred CeEEEECCCC-CCCeE---CCEEcccCcceeEEcCCCCCCCccc-CceEEEECCHHHHHHHHHHHHcCCCCCCCccccce
Confidence 9999999997 33221 111123234666665 989544 55777775 5666554321 0
Q ss_pred CcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeee---ccceEEEEEec----CChHHH
Q 012368 341 HGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVR---GLGLIIGIEFD----VSATPV 413 (465)
Q Consensus 341 ~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---~~g~~~~i~~~----~~~~~~ 413 (465)
.+.++..+++.++.+...++.+ +...++.+++.+++++.|.++ .......... ....++.+.++ ....++
T Consensus 209 ~~~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~~~~~L~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 285 (352)
T cd00616 209 LGYNYRLSEIQAAIGLAQLEKL--DEIIARRREIAERYKELLADL-PGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDEL 285 (352)
T ss_pred eeeccCcCHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHhcCC-CCccCCCCCCCCceeeEEEEEEECCcCCCCHHHH
Confidence 0112334566666666555533 445566666777776666542 1111111111 12334455553 356789
Q ss_pred HHHHHHCCceEeecCC--------------------------CCEEEEecCCCCcHHHHHHHHHHHH
Q 012368 414 VDACRDSGLLVLTAGK--------------------------GNVVRLVPPLIISEQELDQAVEILC 454 (465)
Q Consensus 414 ~~~l~~~Gv~v~~~~~--------------------------~~~lRi~~~~~~t~e~i~~~l~~l~ 454 (465)
.+.|.++||.+..... .+.+|+.++...|++|++.++++|+
T Consensus 286 ~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 286 IEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 9999999997652110 1579999999999999999998873
No 256
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.80 E-value=2.2e-17 Score=163.74 Aligned_cols=286 Identities=14% Similarity=0.163 Sum_probs=176.4
Q ss_pred ccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccC
Q 012368 133 VSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (465)
Q Consensus 133 ~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (465)
.+..++++...+|+++|+++.+.+..++++||++|+..++.++. ++++||+.++.|++.........
T Consensus 45 ~y~r~~~pt~~~le~~la~l~g~~~~~~~~sG~~ai~~~~~ll~------------~Gd~Vl~~~~~y~~t~~~~~~~~- 111 (366)
T PRK08247 45 DYSRTGNPTRGVLEQAIADLEGGDQGFACSSGMAAIQLVMSLFR------------SGDELIVSSDLYGGTYRLFEEHW- 111 (366)
T ss_pred cccCCCCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHhC------------CCCEEEEecCCcCcHHHHHHHHh-
Confidence 35667888899999999999997777899999999987664221 58899999999987532211100
Q ss_pred CCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEE-cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 012368 213 KEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFV-EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG 291 (465)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~-ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g 291 (465)
......+.+++..|++++++++++ ++++|++ .|.|+ .+ +...+++|.++|++||+++|+||+|..
T Consensus 112 --------~~~G~~v~~vd~~d~~~l~~~i~~-~tklv~le~P~NP-~~----~~~dl~~I~~la~~~g~~lIvD~t~~~ 177 (366)
T PRK08247 112 --------KKWNVRFVYVNTASLKAIEQAITP-NTKAIFIETPTNP-LM----QETDIAAIAKIAKKHGLLLIVDNTFYT 177 (366)
T ss_pred --------hccCceEEEECCCCHHHHHHhccc-CceEEEEECCCCC-CC----cHHHHHHHHHHHHHcCCEEEEECCCcc
Confidence 011233455666799999999976 4556665 55544 33 345599999999999999999999842
Q ss_pred CCCCCccccccccCCcccEEEecccCCC--ccceeeEEeC-HHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHH
Q 012368 292 LGRTGYLWAHEHYGIFPDIMTLAKPLAG--GLPIGAALVT-EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFL 368 (465)
Q Consensus 292 ~gr~g~~~~~~~~~~~pdi~t~sK~lg~--G~~iG~v~~~-~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~ 368 (465)
. ..... . ..+...-+.++||.++| +...|+++++ +++++.+...........+|+.+..+...|+.+ +...
T Consensus 178 ~-~~~~p--~-~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~tl--~~r~ 251 (366)
T PRK08247 178 P-VLQRP--L-EEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMKTL--ALRM 251 (366)
T ss_pred c-cccCc--h-hcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccCcH--HHHH
Confidence 1 11111 1 12322233468899986 4788999986 677666643333334456777776666655432 1223
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcee--eeccceEEEEEecCC--hHHHHHHHH----------HCCceEeec-------
Q 012368 369 ASVSKKGHYFKETLKQKLARNPHVKD--VRGLGLIIGIEFDVS--ATPVVDACR----------DSGLLVLTA------- 427 (465)
Q Consensus 369 ~~~~~~~~~l~~~l~~~~~~~~~~~~--~~~~g~~~~i~~~~~--~~~~~~~l~----------~~Gv~v~~~------- 427 (465)
++.+++.+.+ .+.++++|.+.. .++.|.++.++++.. ..+|.+.|. .+.+++.|.
T Consensus 252 ~~~~~~a~~l----~~~L~~~p~v~~v~~P~~gg~~sf~~~~~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~ 327 (366)
T PRK08247 252 RQHEENAKAI----AAFLNEQPGVTDVLYPGRGGMLSFRLQDEEWVNPFLKSLKLITFAESLGGVESFITYPATQTHADI 327 (366)
T ss_pred HHHHHHHHHH----HHHHHhCCCeeEEecCCcCcEEEEEECCHHHHHHHHHcCCcceEccCCCCCceEEECCcccccccC
Confidence 3334444444 444555665443 445688888887421 112222221 012333332
Q ss_pred --------C-CCCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 428 --------G-KGNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 428 --------~-~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
| .++.+||++.+. +.+.+++-|+++|+.
T Consensus 328 ~~~~r~~~gi~~~~~R~svGlE----~~~dl~~dl~~al~~ 364 (366)
T PRK08247 328 PEEIRIANGVCNRLLRFSVGIE----NVEDLIADLKQAFKQ 364 (366)
T ss_pred CHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHhh
Confidence 1 125789987654 566667777777654
No 257
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.80 E-value=4e-17 Score=154.94 Aligned_cols=279 Identities=14% Similarity=0.091 Sum_probs=191.5
Q ss_pred eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC----
Q 012368 157 RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY---- 232 (465)
Q Consensus 157 ~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 232 (465)
.+++|+|.+.+.+.+++++.. .++.|++-+.+|.+........+ +.++|-
T Consensus 126 diiit~G~t~~l~~~l~~~~N-----------~gd~vlie~~ty~~AL~s~~a~g---------------v~~ipv~md~ 179 (472)
T KOG0634|consen 126 DIIITNGNTDGLFKVLRTLIN-----------RGDHVLIEEYTYPSALQSMEALG---------------VKIIPVKMDQ 179 (472)
T ss_pred eEEEecCCchHHHHHHHHhhc-----------CCCceEEecccchHHHHhccccC---------------ceEEeccccC
Confidence 799999999999999998883 68999999999976654332222 222221
Q ss_pred --CCHHHHHhhcCC--------CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCC---Cc--
Q 012368 233 --GNIEATRKLIQP--------GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRT---GY-- 297 (465)
Q Consensus 233 --~d~~~le~~l~~--------~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~---g~-- 297 (465)
-++|.|++.+.. .+..++.+-|...|+.....+.+-.++|.+||++||+++|.||+|--+... +.
T Consensus 180 ~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~ 259 (472)
T KOG0634|consen 180 DGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLE 259 (472)
T ss_pred CCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCcc
Confidence 168999998862 135678888854443334558899999999999999999999998643222 10
Q ss_pred ------------------cccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHH
Q 012368 298 ------------------LWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVL 359 (465)
Q Consensus 298 ------------------~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L 359 (465)
+...+..|.+...-+|||-++.|+|+||+.+++-+++++.......|-+.+.+++....+.|
T Consensus 260 ~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~~ae~~t~~pSg~sq~iv~a~l 339 (472)
T KOG0634|consen 260 LESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKRILDLAEVATSGPSGFSQGIVYAML 339 (472)
T ss_pred ccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHHHHHHHhhhcceeecCcccccHHHHHHHH
Confidence 00111122223334899999999999999999988887765555566677888888888889
Q ss_pred HHhcCchHHH---HHHHHHHHHHHHHHHHHH-cCCC---ceeeeccceEEEEEec-------CC----hHHHHHHHHHCC
Q 012368 360 DKISNPAFLA---SVSKKGHYFKETLKQKLA-RNPH---VKDVRGLGLIIGIEFD-------VS----ATPVVDACRDSG 421 (465)
Q Consensus 360 ~~~~~~~~~~---~~~~~~~~l~~~l~~~~~-~~~~---~~~~~~~g~~~~i~~~-------~~----~~~~~~~l~~~G 421 (465)
+...++++++ +++......+..+...+. ..|. ...++..|+|+|++++ .. ...+...+.++|
T Consensus 340 ~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~g 419 (472)
T KOG0634|consen 340 KRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNG 419 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchHHHHHHHHHHHHHCC
Confidence 8876664444 444433333333333333 3342 2234566899999884 11 123556677999
Q ss_pred ceEeecCC---------CC-EEEEecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 422 LLVLTAGK---------GN-VVRLVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 422 v~v~~~~~---------~~-~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
|.+.++.. +. ++|++++++ +.|+++++++++..++++.-.
T Consensus 420 V~~v~G~~F~v~p~~s~~kiffRls~a~a-~~e~l~~g~~rf~~~ike~f~ 469 (472)
T KOG0634|consen 420 VKLVCGSWFMVDPESSWSKIFFRLSIAFA-EPEKLDEGIERFGSVIKEHFI 469 (472)
T ss_pred eEEecCceeEEcCccCCCcceEEEEeecC-CHHHHHHHHHHHHHHHHHHhh
Confidence 99887531 23 799998876 677999999999999987543
No 258
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.79 E-value=9.6e-18 Score=151.51 Aligned_cols=327 Identities=16% Similarity=0.178 Sum_probs=209.7
Q ss_pred EEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHH
Q 012368 99 EYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKF 178 (465)
Q Consensus 99 ~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~ 178 (465)
..+|+-|..-+. +..+.++|+.++.-... -++.++...+|+++.++.+|.|.-+|++||+..|.++++.-+.-
T Consensus 22 ~~vDLRSDTvT~----PTdeMr~am~eA~vgDd---VyGeD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc~~ 94 (384)
T KOG1368|consen 22 RSVDLRSDTVTV----PTDEMRRAMAEASVGDD---VYGEDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHCHQ 94 (384)
T ss_pred eccccccccccC----ChHHHHHHHhhcccCcc---cccCCccHHHHHHHHHHHhCccceeeecccccccHHHHHHHhcC
Confidence 446666654332 34567777776543211 12334557899999999999999999999999999999976631
Q ss_pred hhhcCCCCCCCCceEEEEcCC-cccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcC-CC------CeEEE
Q 012368 179 QRHSNPDSKEPATEFVSFTNS-FHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQ-PG------KTAAV 250 (465)
Q Consensus 179 t~~~~~~~~~~~~~ii~~~~~-yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~-~~------~~a~v 250 (465)
++..||+-+.+ -|-|..+.++.-+....+ +..+ .++..+ |++++|+.+. ++ .+.+|
T Consensus 95 ----------rg~eii~gd~~HI~~~E~gg~s~l~gv~~~-tv~~-e~dgtm----~ledIe~~ir~~~GD~H~p~T~LI 158 (384)
T KOG1368|consen 95 ----------RGSEIIVGDRAHIHRYEQGGISQLAGVHVR-TVKN-ENDGTM----DLEDIEAAIRVPKGDCHMPPTKLI 158 (384)
T ss_pred ----------CCceEEeccchheeehhccChhhhccceeE-eeee-CCCCee----eHHHHHHhhcCCCCCccCCCceEE
Confidence 35556554332 233333332211110000 0001 011111 7999999998 21 46889
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCC-CCccccccccCCcccE--EEecccCCCccceeeE-
Q 012368 251 FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGR-TGYLWAHEHYGIFPDI--MTLAKPLAGGLPIGAA- 326 (465)
Q Consensus 251 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr-~g~~~~~~~~~~~pdi--~t~sK~lg~G~~iG~v- 326 (465)
.+|...++.|..+.|-+|+.+|.++|++||+.|+.|-+-- |-- ...+.....+.-..|. +||||++|+ |+|-+
T Consensus 159 clENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi-~NAavasgV~vk~i~~~fDSVsiCLSKglgA--PVGSVi 235 (384)
T KOG1368|consen 159 CLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARI-FNAAVASGVPVKKICSAFDSVSICLSKGLGA--PVGSVI 235 (384)
T ss_pred EeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhh-hhHHHHcCCCHHHHHHhhhhhhhhhhccCCC--CcccEE
Confidence 9998777766677799999999999999999999997632 100 0001112222222343 479999976 66655
Q ss_pred EeCHHHHhhccCC--CCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeee-ccceEEE
Q 012368 327 LVTEKVASAINYG--DHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVR-GLGLIIG 403 (465)
Q Consensus 327 ~~~~~i~~~~~~~--~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~g~~~~ 403 (465)
++++++++..... ..++.+-.+.+.++|++.+|+. ....+.+-.++...+.+.+++. .++ ...++ ...++..
T Consensus 236 VG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~--~~~~L~~dHk~A~~lAe~~~~~-~~i--~v~v~a~etNiv~ 310 (384)
T KOG1368|consen 236 VGSKDFIDKARHFRKALGGGMRQSGVLAAAALVALDE--NVPLLRADHKRAKELAEYINTP-EEI--RVEVPAVETNIVN 310 (384)
T ss_pred EccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhc--chHHHHHHHHHHHHHHHHhccc-cce--eeecchhhcceee
Confidence 6788888765421 3455566667778888888873 2234555666666666666532 112 22233 4566666
Q ss_pred EEe---cCChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 404 IEF---DVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 404 i~~---~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
+.+ ...++++++.+.+.||++.++.. ..+|+.++..+|+++++..+..+.+.+
T Consensus 311 ~~l~q~~~~~~~l~~~~~k~gi~lm~~~s-~r~Rivlh~Qvt~~~ve~~~~~~~k~~ 366 (384)
T KOG1368|consen 311 MVLCQARLTAEELCKFLEKNGILLMGGAS-RRIRIVLHHQVTDEDVEYVKSVLSKKF 366 (384)
T ss_pred eecccccCCHHHHHHHHHHCCeEEeeccc-cceEEEEEEecCHHHHHHHHHHHHHHH
Confidence 665 25688999999999999987654 568999999999999999999995433
No 259
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=3.1e-17 Score=163.81 Aligned_cols=288 Identities=14% Similarity=0.149 Sum_probs=182.0
Q ss_pred ccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccC
Q 012368 133 VSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (465)
Q Consensus 133 ~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (465)
.++.+.++...+++++|+++.+.+.+++++||++|+..++..... ++++||+..+.|++.........
T Consensus 57 ~y~r~~~p~~~~le~~lA~l~g~~~~i~~ssG~~Ai~~~l~all~-----------~GD~Vi~~~~~y~~~~~~~~~~~- 124 (398)
T PRK08249 57 IYSRNTNPTVQAFEEKVRILEGAEAATAFSTGMAAISNTLYTFLK-----------PGDRVVSIKDTYGGTNKIFTEFL- 124 (398)
T ss_pred cccCCCChHHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcC-----------CCCEEEEcCCchHHHHHHHHHHH-
Confidence 345677888999999999999988889999999999998876542 68999999999976432111100
Q ss_pred CCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 213 KEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
......+.+++..|++++++++++ ++++|+++..++..|.+.+ +++|.++|++||+++|+|++|..+
T Consensus 125 --------~~~Gi~v~~vd~~d~e~l~~~i~~-~tklV~ie~p~NPtg~v~d----l~~I~~la~~~gi~livD~t~a~~ 191 (398)
T PRK08249 125 --------PRMGVDVTLCETGDHEQIEAEIAK-GCDLLYLETPTNPTLKIVD----IERLAAAAKKVGALVVVDNTFATP 191 (398)
T ss_pred --------hhCCeEEEEcCCCCHHHHHHhcCC-CCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCcCcc
Confidence 011122334455689999999975 4667777655555566655 899999999999999999998743
Q ss_pred CCCCccccccccCCcccEE--EecccCCC-ccce-eeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHH
Q 012368 293 GRTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPI-GAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFL 368 (465)
Q Consensus 293 gr~g~~~~~~~~~~~pdi~--t~sK~lg~-G~~i-G~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~ 368 (465)
. .... .....|++ +++|.++| |.++ |++++++++++.+...........+++.++.++..|+.+ +...
T Consensus 192 ~-~~~~-----l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~tL--~~R~ 263 (398)
T PRK08249 192 I-NQNP-----LALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREINGATMDPMSAYLILRGMKTL--KLRV 263 (398)
T ss_pred c-cCCc-----hhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcchH--HHHH
Confidence 1 1111 12234555 57799986 5554 777788888877754333334456777777766666644 2334
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCce------------------eeeccceEEEEEecCCh---HHHHHHHH--HCCce--
Q 012368 369 ASVSKKGHYFKETLKQKLARNPHVK------------------DVRGLGLIIGIEFDVSA---TPVVDACR--DSGLL-- 423 (465)
Q Consensus 369 ~~~~~~~~~l~~~l~~~~~~~~~~~------------------~~~~~g~~~~i~~~~~~---~~~~~~l~--~~Gv~-- 423 (465)
++..++...+.+.|+ .+|.+. ...|.|.++.|++.... .+|.+.|. ..++-
T Consensus 264 ~~~~~na~~la~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~f~~~l~l~~~~~s~G 339 (398)
T PRK08249 264 RQQQESAMALAKYLQ----THPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKRLLPKLRYAHRAANLG 339 (398)
T ss_pred HHHHHHHHHHHHHHH----cCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHHHHHhCCcceEccCCC
Confidence 445555555555554 333221 12467889999984332 23333331 11221
Q ss_pred -----Ee-ec---------------C-CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 424 -----VL-TA---------------G-KGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 424 -----v~-~~---------------~-~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
+. |. | .++.+|+++.+. +.+.+++-|+++|+.++
T Consensus 340 ~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE----~~~dl~~dl~~al~~~~ 395 (398)
T PRK08249 340 AVETIYGPARTTSHVENTLEERAALGIPEGLVRISVGIE----DTEDLIADLEQAFAHLE 395 (398)
T ss_pred CCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHHHhh
Confidence 11 10 1 135799987764 45566666777766544
No 260
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.79 E-value=5.2e-18 Score=161.41 Aligned_cols=283 Identities=17% Similarity=0.200 Sum_probs=195.1
Q ss_pred CCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCc
Q 012368 137 YYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHY 216 (465)
Q Consensus 137 ~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~ 216 (465)
+..+.+.++++..+++.+.+..+.++-|..+|..-+-... .+...|+.+.--|++......+++
T Consensus 179 G~~~~hkelE~l~A~f~g~e~a~vF~mGf~TNs~~~p~l~------------~~gsLIiSDelNHaSi~~GaRLSg---- 242 (519)
T KOG1357|consen 179 GTTEEHKELEELVARFLGVEDAIVFSMGFATNSMNIPSLL------------GKGSLIISDELNHASLITGARLSG---- 242 (519)
T ss_pred ccHHHHHHHHHHHHHhcCCcceEEEeccccccccCcceee------------cCCcceeeccccchheeccccccC----
Confidence 3455688999999999996665555667766666555444 244566777777888766555443
Q ss_pred CCCCCCCCCCceEeeCCCHHHHHhhcC------------CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEE
Q 012368 217 RSPFEPVMPGVNFVEYGNIEATRKLIQ------------PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLV 284 (465)
Q Consensus 217 ~~~~~~~~~~~~~~~~~d~~~le~~l~------------~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI 284 (465)
..+..+.+||+++||++|+ +.++..|++|.+.++.|.++. |.++.+++++|.++|+
T Consensus 243 --------AtiRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~----Lp~vvalkkkykayl~ 310 (519)
T KOG1357|consen 243 --------ATTRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD----LPEVVALKKKYKAYLY 310 (519)
T ss_pred --------ceEEEEecCCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc----cHHHHHhhccccEEEE
Confidence 3355678899999999985 234678999999999999987 8899999999999999
Q ss_pred EeccccC--CCCCCccccccccCCcc---cEE--EecccCCC-ccceeeEEeCHHHHhhccCCCCcCCC--CChHHHHHH
Q 012368 285 FDEVQCG--LGRTGYLWAHEHYGIFP---DIM--TLAKPLAG-GLPIGAALVTEKVASAINYGDHGSTF--AGSPLVCNA 354 (465)
Q Consensus 285 ~DEv~~g--~gr~g~~~~~~~~~~~p---di~--t~sK~lg~-G~~iG~v~~~~~i~~~~~~~~~~~t~--~~~~~~~~a 354 (465)
.||+++. .|++|.+ ..+.+++.| ||+ ||.|++++ | |++.+++++++.+........+ ..+|+.+..
T Consensus 311 lDEAHSiGA~g~tGrg-vce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk~lid~lrt~s~~~~yat~~sppvaqq 386 (519)
T KOG1357|consen 311 LDEAHSIGAMGATGRG-VCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSKELIDYLRTPSPSALYATSLSPPVAQQ 386 (519)
T ss_pred eeccccccccCCCCcc-eeeccCCCchhheeecceehhhccccc---ceecCcHHHHhhhccCCCceeecccCChHHHHH
Confidence 9999985 3455543 567777643 554 78899985 4 7888999999998754333333 235555666
Q ss_pred HHHHHHHhcC-------chHHHHHHHHHHHHHHHHHHHHHcCCCcee----eeccceEEEEEecCChHHHHHHHHHCCce
Q 012368 355 AIAVLDKISN-------PAFLASVSKKGHYFKETLKQKLARNPHVKD----VRGLGLIIGIEFDVSATPVVDACRDSGLL 423 (465)
Q Consensus 355 a~a~L~~~~~-------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~ 423 (465)
.+.+++.+.- .+-.++++++..+++..|+.. +.+.. .+-..+++ -....-..+.+.|+++++.
T Consensus 387 ~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~----gfivyG~~dSpVvplll--~~~~k~~~f~r~~l~~nig 460 (519)
T KOG1357|consen 387 ILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM----GFIVYGNNDSPVVPLLL--YGPAKIVAFSREMLERNIG 460 (519)
T ss_pred HHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC----cEEEecCCCCCcceeee--cCcccccHHHHHHHhcCce
Confidence 6667776632 234566777777777766553 21111 11111111 1123445688899998877
Q ss_pred EeecCC------CCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 424 VLTAGK------GNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 424 v~~~~~------~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
+...+. ....|++.+..++.|+++.+++.+.+.=
T Consensus 461 vVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g 500 (519)
T KOG1357|consen 461 VVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVG 500 (519)
T ss_pred EEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhc
Confidence 665443 2346999999999999999999987653
No 261
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.79 E-value=1e-17 Score=167.27 Aligned_cols=283 Identities=15% Similarity=0.132 Sum_probs=177.2
Q ss_pred ccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccC
Q 012368 133 VSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (465)
Q Consensus 133 ~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (465)
.+..++++...+|+++++++++.+..++++||+.|+..++..... ++++||+..+.|.+..........
T Consensus 54 ~y~r~~~pt~~~Le~~lA~l~G~~~al~~~sG~~Ai~~~l~al~~-----------~Gd~Vv~~~~~y~~~~~~~~~~~~ 122 (386)
T PRK06767 54 IYSRLGNPTVKLFEERMAVLEGGEEALAFGSGMAAISATLIGFLK-----------AGDHIICSNGLYGCTYGFLEVLEE 122 (386)
T ss_pred cccCCCCcchHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCcHHHHHHHHHHHHh
Confidence 345667777899999999999977888889999999888765541 688999988877544322111110
Q ss_pred CCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 213 KEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
.....+.+++..|++++++++++ ++++|++|..++..|.+.+ +++|.++|+++|+++|+||+|...
T Consensus 123 ---------~~gi~~~~~~~~d~~~l~~~i~~-~tklV~lesp~NptG~v~d----l~~I~~la~~~g~~vivD~a~a~~ 188 (386)
T PRK06767 123 ---------KFMITHSFCDMETEADIENKIRP-NTKLIFVETPINPTMKLID----LKQVIRVAKRNGLLVIVDNTFCSP 188 (386)
T ss_pred ---------hcCeEEEEeCCCCHHHHHHhhCc-CceEEEEeCCCCCCceecC----HHHHHHHHHHcCCEEEEECCCccc
Confidence 00112334445689999999975 4566666665555666655 899999999999999999998521
Q ss_pred CCCCccccccccCCcccEE--EecccCCC-ccce-eeEEeCHHHHhhccCC---CCcCCCCChHHHHHHHHHHHHHhcCc
Q 012368 293 GRTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPI-GAALVTEKVASAINYG---DHGSTFAGSPLVCNAAIAVLDKISNP 365 (465)
Q Consensus 293 gr~g~~~~~~~~~~~pdi~--t~sK~lg~-G~~i-G~v~~~~~i~~~~~~~---~~~~t~~~~~~~~~aa~a~L~~~~~~ 365 (465)
..+... ..+ .|++ +++|.++| |.++ |+++++++.++.+... ..++ ..+|+.+++++..|+.+ +
T Consensus 189 -~~~~pl---~~g--~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~--~~~~~~a~l~~~~L~tl--~ 258 (386)
T PRK06767 189 -YLQRPL---ELG--CDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGG--IMAPFDAWLLLRGLKTL--A 258 (386)
T ss_pred -ccCCch---hcC--CcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCC--CCCHHHHHHHHcCCCcH--H
Confidence 222211 123 3665 56799987 7775 8899998876654311 1112 23566555554444422 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCceee------------eccceEEEEEecC---ChHHHHHHHHHCCceEeecC--
Q 012368 366 AFLASVSKKGHYFKETLKQKLARNPHVKDV------------RGLGLIIGIEFDV---SATPVVDACRDSGLLVLTAG-- 428 (465)
Q Consensus 366 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~------------~~~g~~~~i~~~~---~~~~~~~~l~~~Gv~v~~~~-- 428 (465)
...++.+++..++.+.| .++|.+..+ ++.|.++.++++. ...+|.+.|...++.+.-++
T Consensus 259 ~r~~~~~~~a~~la~~L----~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~ 334 (386)
T PRK06767 259 VRMDRHCDNAEKIVSFL----KNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTE 334 (386)
T ss_pred HHHHHHHHHHHHHHHHH----HcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcC
Confidence 34455555665555555 445543322 3568889998842 24567777765544432211
Q ss_pred ------------------------CCCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 429 ------------------------KGNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 429 ------------------------~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
..+.+||++.+. +.+.+++-|+++|.
T Consensus 335 sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE----~~~dl~~dl~~al~ 384 (386)
T PRK06767 335 TLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGLE----SWEDIVSDLEQALK 384 (386)
T ss_pred ccccCCCccccccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHh
Confidence 125689987764 45566666666664
No 262
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.79 E-value=1.1e-17 Score=167.68 Aligned_cols=248 Identities=15% Similarity=0.148 Sum_probs=161.1
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+..++++...+|+++|+++++.+.+++++||++|+..++..... ++++||+.++.|.+.........
T Consensus 58 Y~r~~~p~~~~Le~~iA~~~g~~~~l~~~sG~~Ai~~al~~ll~-----------~Gd~Vl~~~~~y~~~~~~~~~~~-- 124 (400)
T PRK06234 58 YSRLGNPTSTEVENKLALLEGGEAAVVAASGMGAISSSLWSALK-----------AGDHVVASDTLYGCTFALLNHGL-- 124 (400)
T ss_pred ccCCCCccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHhC-----------CCCEEEEecCccchHHHHHHHHH--
Confidence 45667777899999999999977889999999999988875542 68899999987754432211100
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh--CCEEEEeccccC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDA--GALLVFDEVQCG 291 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~--g~llI~DEv~~g 291 (465)
......+.+++..|++++++++++ ++++|++|..++..|.+.+ +++|.++|+++ |+++|+||+|..
T Consensus 125 -------~~~G~~v~~vd~~d~e~l~~~i~~-~tklI~iesP~NPtG~v~d----l~~I~~la~~~~~~i~livDea~~~ 192 (400)
T PRK06234 125 -------TRYGVEVTFVDTSNLEEVRNALKA-NTKVVYLETPANPTLKVTD----IKAISNIAHENNKECLVFVDNTFCT 192 (400)
T ss_pred -------hhCCeEEEEECCCCHHHHHHHhcc-CCeEEEEECCCCCCCCcCC----HHHHHHHHHhcCCCCEEEEECCCCc
Confidence 011133455666789999999975 4566666655555565554 99999999997 999999999864
Q ss_pred CCCCCccccccccCCcccEE--EecccCCC-ccce-eeEEeCHHHHhhccCC--CCcCCCCChHHHHHHHHHHHHHhcCc
Q 012368 292 LGRTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPI-GAALVTEKVASAINYG--DHGSTFAGSPLVCNAAIAVLDKISNP 365 (465)
Q Consensus 292 ~gr~g~~~~~~~~~~~pdi~--t~sK~lg~-G~~i-G~v~~~~~i~~~~~~~--~~~~t~~~~~~~~~aa~a~L~~~~~~ 365 (465)
+ ..+... +...|++ +++|.++| |.++ |++++++++++.+... ....+...+|+.++.++..|+.+ +
T Consensus 193 ~-~~~~~l-----~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~tl--~ 264 (400)
T PRK06234 193 P-YIQRPL-----QLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKTL--Q 264 (400)
T ss_pred h-hcCCch-----hhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCcH--H
Confidence 3 222211 2234555 57799987 7665 9999999888876531 11223456777776666665532 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCce------------------eeeccceEEEEEecCC---hHHHHHHHH
Q 012368 366 AFLASVSKKGHYFKETLKQKLARNPHVK------------------DVRGLGLIIGIEFDVS---ATPVVDACR 418 (465)
Q Consensus 366 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~------------------~~~~~g~~~~i~~~~~---~~~~~~~l~ 418 (465)
...++..++..++.+.|+ .+|.+. ...+.|.++.++++.. ..+|.+.|.
T Consensus 265 ~r~~~~~~na~~~a~~L~----~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~ 334 (400)
T PRK06234 265 IRMEKHCKNAMKVAKFLE----SHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVK 334 (400)
T ss_pred HHHHHHHHHHHHHHHHHH----cCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCC
Confidence 344555556655555554 333221 1235688889998422 234444443
No 263
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.79 E-value=6.9e-17 Score=165.02 Aligned_cols=281 Identities=19% Similarity=0.158 Sum_probs=164.3
Q ss_pred HHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccc---cCCCCcCC
Q 012368 144 ELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALAL---TSKEHYRS 218 (465)
Q Consensus 144 ~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~---~~~~~~~~ 218 (465)
++.++++++++ .+++.+++||+++++.++..... . ++++|++.++.|+.+....... .+.....
T Consensus 116 e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~-~---------~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~- 184 (447)
T PRK00451 116 EYQTMICELTGMDVANASMYDGATALAEAALMAVRI-T---------KRKKVLVSGAVHPEYREVLKTYLKGQGIEVVE- 184 (447)
T ss_pred HHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHh-c---------CCCEEEEeCccCHHHHHHHHHHHHhCCcEEEE-
Confidence 34466788887 56899999999988877765431 1 4788999887765444322111 1111111
Q ss_pred CCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE--eccccCCCCCC
Q 012368 219 PFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF--DEVQCGLGRTG 296 (465)
Q Consensus 219 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~--DEv~~g~gr~g 296 (465)
.+..++ . -|++++++++++ ++++|++...+ ..|.+.+ +++|.++|+++|+++|+ |.+..|+ ..
T Consensus 185 --v~~~~~-~----~d~~~l~~~i~~-~t~~v~l~~pn-~tG~v~~----l~~I~~~a~~~~~~~iv~~d~~~~g~--~~ 249 (447)
T PRK00451 185 --VPYEDG-V----TDLEALEAAVDD-DTAAVVVQYPN-FFGVIED----LEEIAEIAHAGGALFIVGVDPVSLGL--LK 249 (447)
T ss_pred --ecCCCC-C----CCHHHHHHhcCC-CeEEEEEECCC-CCCeeCC----HHHHHHHHHHCCCEEEEEcChHHhcc--CC
Confidence 111111 1 289999999975 46666655444 4566654 99999999999999998 5543221 11
Q ss_pred ccccccccCCcccEEE-----ecccCC-CccceeeEEeCHHHHhhccCC--------------------------CCcCC
Q 012368 297 YLWAHEHYGIFPDIMT-----LAKPLA-GGLPIGAALVTEKVASAINYG--------------------------DHGST 344 (465)
Q Consensus 297 ~~~~~~~~~~~pdi~t-----~sK~lg-~G~~iG~v~~~~~i~~~~~~~--------------------------~~~~t 344 (465)
... ....|+++ +||.+. +|+++|++++++++++.+.+. ....+
T Consensus 250 ---~~~--~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (447)
T PRK00451 250 ---PPG--EYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKAT 324 (447)
T ss_pred ---Ccc--cCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeecccccccccccccc
Confidence 111 23457765 456555 478999999999888774211 01111
Q ss_pred --CCChHHHH-HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEE--EEEecCChHHHHHHHHH
Q 012368 345 --FAGSPLVC-NAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLII--GIEFDVSATPVVDACRD 419 (465)
Q Consensus 345 --~~~~~~~~-~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~--~i~~~~~~~~~~~~l~~ 419 (465)
++.+...+ .++.++++.+.++ ..+++.+....+++.+.+.+.+.+.+... ..+.+. .+.++....++.++|.+
T Consensus 325 ~~~~~~~~~~~~aaa~~l~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~~~~~v~~~~~~~~~~~~L~~ 402 (447)
T PRK00451 325 SNICTNQALNALAAAIYMSLLGPE-GLRELAEQNHQKAHYLAERLAEIGGVELF-DGPFFNEFVVRLPKPAEEVNEALLE 402 (447)
T ss_pred ccccccHHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHhhcCCEEec-CCCeEEEEEEecCCCHHHHHHHHHh
Confidence 22222222 3333345544332 23333444444444444444444433222 222222 24443456889999999
Q ss_pred CCceEe----ecC--CCCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 420 SGLLVL----TAG--KGNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 420 ~Gv~v~----~~~--~~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
+|+... +.. ..+++|++++..+|+++++++++.|++++
T Consensus 403 ~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 403 KGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred cCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 988742 111 13589999998899999999999998764
No 264
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=8.7e-17 Score=160.01 Aligned_cols=238 Identities=17% Similarity=0.183 Sum_probs=156.5
Q ss_pred ccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccC
Q 012368 133 VSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (465)
Q Consensus 133 ~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (465)
.+++++++...+|+++|++..+.+.+++++||++|+..++.... .++++|++.+++|++..........
T Consensus 45 ~Y~R~~~pt~~~L~~~lA~l~g~~~~i~~~sg~~Ai~~~l~~l~-----------~~GD~Vl~~~~~y~~~~~~~~~~~~ 113 (386)
T PRK08045 45 DYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFL-----------KPGDLLVAPHDCYGGSYRLFDSLAK 113 (386)
T ss_pred eeeCCCCccHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHc-----------CCCCEEEEcCCCcHHHHHHHHHHHh
Confidence 35677888899999999999987789999999999999888654 2689999999999764422211110
Q ss_pred CCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 213 KEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
.. ...+.+++..|++++++++++ ++++|+++..++..|.+.+ +++|.++|+++|+++|+||+|...
T Consensus 114 ~~---------gi~v~~vd~~d~e~l~~~l~~-~tklV~l~sP~NPtG~v~d----i~~I~~ia~~~g~~vivDeay~~~ 179 (386)
T PRK08045 114 RG---------CYRVLFVDQGDEQALRAALAE-KPKLVLVESPSNPLLRVVD----IAKICHLAREAGAVSVVDNTFLSP 179 (386)
T ss_pred hC---------CeEEEEeCCCCHHHHHHhccc-CCeEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCCcc
Confidence 00 011223333588999999975 4566666655555555554 889999999999999999998643
Q ss_pred CCCCccccccccCCcccEE--EecccCCC--ccceeeEEe-CHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchH
Q 012368 293 GRTGYLWAHEHYGIFPDIM--TLAKPLAG--GLPIGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAF 367 (465)
Q Consensus 293 gr~g~~~~~~~~~~~pdi~--t~sK~lg~--G~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~ 367 (465)
. .... .....|++ +++|.++| +...|++++ ++++.+.+.......+.+.+|+.+..++..|+.+ +..
T Consensus 180 ~-~~~p-----l~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~tl--~~R 251 (386)
T PRK08045 180 A-LQNP-----LALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRTL--VPR 251 (386)
T ss_pred c-cCCc-----hhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhccH--HHH
Confidence 1 1111 12234655 57899986 477898877 5677666543222334457888887777777643 222
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcee------------------eeccceEEEEEec
Q 012368 368 LASVSKKGHYFKETLKQKLARNPHVKD------------------VRGLGLIIGIEFD 407 (465)
Q Consensus 368 ~~~~~~~~~~l~~~l~~~~~~~~~~~~------------------~~~~g~~~~i~~~ 407 (465)
.++..++...+.+.|+ .+|.+.. ..+.|.++.++++
T Consensus 252 ~~~~~~na~~la~~L~----~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~ 305 (386)
T PRK08045 252 MELAQRNAQAIVKYLQ----TQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELD 305 (386)
T ss_pred HHHHHHHHHHHHHHHH----cCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEec
Confidence 3444455555544443 4442221 2467889999985
No 265
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.78 E-value=1.2e-17 Score=166.49 Aligned_cols=241 Identities=22% Similarity=0.236 Sum_probs=155.1
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+..+.++...++++++++..+.+.+++++||++|+..+++.... ++++||+..+.| |.+.......
T Consensus 48 y~r~~~p~~~~le~~la~l~g~~~~~~~~sG~~Ai~~al~al~~-----------~Gd~Vl~~~~~~-~~t~~~~~~~-- 113 (380)
T TIGR01325 48 YSRYANPTVAAFEERIAALEGAERAVATATGMSAIQAALMTLLQ-----------AGDHVVASRSLF-GSTVGFISEI-- 113 (380)
T ss_pred eecCCCchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC-----------CCCEEEEecCCc-chHHHHHHHH--
Confidence 45667777899999999999888899999999999999976642 578898877665 3332211100
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
.......+.+++.+|++++++++++ ++++|++|..+++.|.+.+ +++|.++|+++|+++|+||+|..+
T Consensus 114 ------~~~~g~~v~~v~~~d~~~l~~~i~~-~tklV~le~p~np~g~~~d----l~~I~~la~~~gi~livD~a~~~~- 181 (380)
T TIGR01325 114 ------LPRFGIEVSFVDPTDLNAWEAAVKP-NTKLVFVETPSNPLGELVD----IAALAELAHAIGALLVVDNVFATP- 181 (380)
T ss_pred ------HHHhCCEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCccc-
Confidence 0011234556677789999999975 5678888776666666655 999999999999999999998643
Q ss_pred CCCccccccccCCcccEEE--ecccCCC-ccce-eeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHH
Q 012368 294 RTGYLWAHEHYGIFPDIMT--LAKPLAG-GLPI-GAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLA 369 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~t--~sK~lg~-G~~i-G~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~ 369 (465)
..... ....+|+++ ++|.++| |.++ |++++++++++.+...........+|..+.+++..++.+. ...+
T Consensus 182 ~~~~p-----l~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl~--~r~~ 254 (380)
T TIGR01325 182 VLQQP-----LKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSPFNAWVLLKGLETLS--LRMQ 254 (380)
T ss_pred ccCCc-----hhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHHHHHHhccCcHH--HHHH
Confidence 11111 123467774 7899987 6665 7788888887776532111122335555555554444332 2345
Q ss_pred HHHHHHHHHHHHHHHHH--H--cCCCce----------eeeccceEEEEEec
Q 012368 370 SVSKKGHYFKETLKQKL--A--RNPHVK----------DVRGLGLIIGIEFD 407 (465)
Q Consensus 370 ~~~~~~~~l~~~l~~~~--~--~~~~~~----------~~~~~g~~~~i~~~ 407 (465)
+..++...+.+.|++.. + .+|... ...+.|.++.++++
T Consensus 255 ~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~ 306 (380)
T TIGR01325 255 KQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA 306 (380)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC
Confidence 55555555555554320 0 022111 12467889999985
No 266
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.78 E-value=4.5e-17 Score=162.59 Aligned_cols=237 Identities=20% Similarity=0.208 Sum_probs=150.3
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+..+.++...+++++++++.+.+.+++++||++|+..++..+.. ++++||+..+.|.+.........
T Consensus 55 y~r~~~p~~~~le~~la~l~g~~~~v~~ssG~~Ai~~al~al~~-----------~Gd~Vi~~~~~y~~t~~~~~~~~-- 121 (390)
T PRK08133 55 YSRFTNPTVTMFQERLAALEGAEACVATASGMAAILAVVMALLQ-----------AGDHVVSSRSLFGSTVSLFEKIF-- 121 (390)
T ss_pred eECCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC-----------CCCEEEEccCcchhHHHHHHHHH--
Confidence 44556777899999999999988899999999999999886641 68899998887755432111000
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
......+.+++.+|++++++++++ ++++|++|..++..|.+.+ +++|.++|++||+++|+|+++...
T Consensus 122 -------~~~G~~v~~vd~~d~~~l~~~i~~-~tklV~ie~p~NptG~v~d----l~~I~~la~~~gi~livD~t~~~~- 188 (390)
T PRK08133 122 -------ARFGIETTFVDLTDLDAWRAAVRP-NTKLFFLETPSNPLTELAD----IAALAEIAHAAGALLVVDNCFCTP- 188 (390)
T ss_pred -------HHcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCCccc-
Confidence 011234556666789999999975 5677777665555666654 899999999999999999997532
Q ss_pred CCCccccccccCCcccEE--EecccCCC-ccce-eeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHH
Q 012368 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPI-GAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLA 369 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~--t~sK~lg~-G~~i-G~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~ 369 (465)
...... ..+ .|++ +++|.+++ |.++ |++++++++++.+...........+++.+..++..++.+ ....+
T Consensus 189 ~~~~pl---~~g--~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl~tl--~~R~~ 261 (390)
T PRK08133 189 ALQQPL---KLG--ADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAWVFLKGLETL--SLRME 261 (390)
T ss_pred ccCCch---hhC--CcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHHHHHcccchH--HHHHH
Confidence 111111 112 4655 56799987 7777 667778777665542211122234555554444433322 12233
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCce------------------eeeccceEEEEEec
Q 012368 370 SVSKKGHYFKETLKQKLARNPHVK------------------DVRGLGLIIGIEFD 407 (465)
Q Consensus 370 ~~~~~~~~l~~~l~~~~~~~~~~~------------------~~~~~g~~~~i~~~ 407 (465)
+..++...+.+.| +++|.+. ...+.|.++.|++.
T Consensus 262 ~~~~~a~~la~~L----~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~ 313 (390)
T PRK08133 262 AHSANALALAEWL----EAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVK 313 (390)
T ss_pred HHHHHHHHHHHHH----HhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEc
Confidence 3344444444444 3343221 12467889999984
No 267
>PRK07049 methionine gamma-lyase; Validated
Probab=99.78 E-value=6.5e-17 Score=162.91 Aligned_cols=288 Identities=15% Similarity=0.149 Sum_probs=174.8
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
++.++++....|++.|+++.+.+.+++++||++|+..++..+.. +++.|++.+|.|.++.........
T Consensus 77 y~R~~~Pt~~~Le~~lA~leg~~~~iv~~sG~~Ai~~~l~al~~-----------~Gd~Vv~~~p~Y~~~~~~~~~~l~- 144 (427)
T PRK07049 77 YSRFNHPNSEIVEDRLAVYEGAESAALFSSGMSAIATTLLAFVR-----------PGDVILHSQPLYGGTETLLAKTFR- 144 (427)
T ss_pred ccCCCCcCHHHHHHHHHHHhCCCcEEEEccHHHHHHHHHHHHhC-----------CCCEEEEcCCCcccHHHHHHHHHH-
Confidence 46677777899999999999988899999999999988876652 689999999999887543211000
Q ss_pred CCcCCCCCCCCCCce-EeeCCCHHHHHhhcC----CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHH---hCCEEEE
Q 012368 214 EHYRSPFEPVMPGVN-FVEYGNIEATRKLIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDD---AGALLVF 285 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~-~~~~~d~~~le~~l~----~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~---~g~llI~ 285 (465)
.....+. +....|++++++++. ..++++|+++..+++.|.+ ++.+.+.+|++.|++ +++++|+
T Consensus 145 --------~~Gi~~v~~~~~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v-~d~~~l~~la~~~~~~~~~~~~vvv 215 (427)
T PRK07049 145 --------NFGVGAVGFADGLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSL-VDVAAVRRVADAIEARQGHRPIIAC 215 (427)
T ss_pred --------hcCcEEEEEeCCCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcc-cCHHHHHHHHHHhhhcccCCCEEEE
Confidence 0001111 112246777776663 2356666666554445544 465555555555433 7999999
Q ss_pred eccccCCCCCCccccccccCCcccEE--EecccCCC--ccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHH
Q 012368 286 DEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAG--GLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDK 361 (465)
Q Consensus 286 DEv~~g~gr~g~~~~~~~~~~~pdi~--t~sK~lg~--G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~ 361 (465)
||+|.++.... . . .++ .|++ ++||.++| |+++|++++++++++.+.........+.+|+.+.++...|+.
T Consensus 216 Dety~~~~~~~-p--l-~~g--~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~t 289 (427)
T PRK07049 216 DNTLLGPVFQK-P--L-EHG--ADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAIGTQLDPHSCWMLGRSLET 289 (427)
T ss_pred ECCccccccCC-c--c-ccC--CCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCh
Confidence 99976542111 1 1 123 3554 78999995 799999999999888776432222344677877777666653
Q ss_pred hcCchHHHHHHHHHHHHHHHHHHHHHcCCCcee--------------------eeccceEEEEEecCC---hHHHHHHHH
Q 012368 362 ISNPAFLASVSKKGHYFKETLKQKLARNPHVKD--------------------VRGLGLIIGIEFDVS---ATPVVDACR 418 (465)
Q Consensus 362 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--------------------~~~~g~~~~i~~~~~---~~~~~~~l~ 418 (465)
+ ....++..++...+.+.|+ ++|.+.. ..+.|.++.|++... +.+|.+.|.
T Consensus 290 l--~~R~~~~~~~a~~la~~L~----~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~ 363 (427)
T PRK07049 290 L--VLRMERANRNARAVAEFLR----DHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGGQAAAFRFLNALQ 363 (427)
T ss_pred H--HHHHHHHHHHHHHHHHHHH----hCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCCHHHHHHHHHcCc
Confidence 3 2223444445555554444 3432111 235688999998433 233444332
Q ss_pred --HCCceEe--------ec---------------C-CCCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 419 --DSGLLVL--------TA---------------G-KGNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 419 --~~Gv~v~--------~~---------------~-~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
..++-+. |. | .++.+||++.+. +.+.+++-|+++|+
T Consensus 364 l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE----~~~dl~~dl~~al~ 425 (427)
T PRK07049 364 IFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGIE----HPDDLIADLAQALD 425 (427)
T ss_pred ccEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCcC----CHHHHHHHHHHHHh
Confidence 1111111 10 1 135789987764 56666777777664
No 268
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.78 E-value=9.4e-17 Score=159.65 Aligned_cols=237 Identities=19% Similarity=0.184 Sum_probs=155.0
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
++.++++...+|+++|++..+.+.+++++||++|+..++..... ++++|++.+++|.+.......+...
T Consensus 45 Y~R~~~p~~~~le~~lA~l~g~~~v~~~~gg~~Ai~~~l~all~-----------~GD~Vl~~~p~y~~~~~~~~~~~~~ 113 (382)
T TIGR02080 45 YSRSGNPTRDLLQQALAELEGGAGAVVTNTGMSAIHLVTTALLG-----------PDDLLVAPHDCYGGTYRLLNALAKK 113 (382)
T ss_pred ccCCCCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHcC-----------CCCEEEEcCCCcHHHHHHHHHHHhh
Confidence 46678888999999999999888999999999999999986642 6899999999997644322111110
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
. ...+.+++..|++++++++++ ++++|+++..++..|.+.+ +++|.++|+++|+++|+||+|..+-
T Consensus 114 ~---------~~~v~~~d~~d~~~l~~ai~~-~tklV~l~~p~NPtG~~~d----l~~I~~la~~~g~~vvvD~a~~~~~ 179 (382)
T TIGR02080 114 G---------CFRVLFVDQGDEQALRAALAQ-KPKLVLIETPSNPLLRVVD----IAKICHLAKAVGAVVVVDNTFLSPA 179 (382)
T ss_pred c---------CeEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCcccc
Confidence 0 011223334588999999975 3566666554444555554 8899999999999999999986431
Q ss_pred CCCccccccccCCcccEE--EecccCCC--ccceeeEEe-CHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHH
Q 012368 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG--GLPIGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFL 368 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~--t~sK~lg~--G~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~ 368 (465)
.. .. . ....|++ +++|.++| +++.|++++ ++++.+.+.......+...+|+.+..++..++.+. ...
T Consensus 180 ~~-~p--l---~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~tl~--~R~ 251 (382)
T TIGR02080 180 LQ-NP--L---ALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGLRTLV--ARM 251 (382)
T ss_pred cC-Cc--h---hhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHcccchHH--HHH
Confidence 11 11 1 1223555 67899975 588999876 56777666432233345577887776655555332 123
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCce------------------eeeccceEEEEEec
Q 012368 369 ASVSKKGHYFKETLKQKLARNPHVK------------------DVRGLGLIIGIEFD 407 (465)
Q Consensus 369 ~~~~~~~~~l~~~l~~~~~~~~~~~------------------~~~~~g~~~~i~~~ 407 (465)
++..++...+.+.| +.+|.+. ...|.|.++.+++.
T Consensus 252 ~~~~~na~~~a~~L----~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 304 (382)
T TIGR02080 252 RLQQRNAQAIVEYL----QTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELK 304 (382)
T ss_pred HHHHHHHHHHHHHH----HhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEec
Confidence 44444555544444 4444322 12467889999994
No 269
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.77 E-value=1.1e-16 Score=160.16 Aligned_cols=237 Identities=18% Similarity=0.165 Sum_probs=152.9
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+..++++...+|+++|+++.+.+..++++||+.|+..++.... .++++||+.++.|.+..........
T Consensus 59 y~r~~~p~~~~Le~~lA~l~G~~~~~~~~sG~~Ai~~~l~~~l-----------~~Gd~Vl~~~~~y~~~~~~~~~~~~- 126 (398)
T PRK07504 59 YSRYSNPTVDMFEKRMCALEGAEDARATASGMAAVTAAILCQV-----------KAGDHVVAARALFGSCRYVVETLLP- 126 (398)
T ss_pred eecCCCchHHHHHHHHHHHhCCCeeeEecCHHHHHHHHHHHHh-----------CCCCEEEEcCCchhHHHHHHHHHHh-
Confidence 4556777789999999999997777789999999988776543 1689999999988765432211100
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
.....+.+++..|++++++++++ ++++|+++..++..|.+.+ +++|.++|+++|+++|+||+|..+
T Consensus 127 --------~~G~~v~~vd~~d~e~l~~ai~~-~tklV~lesp~NptG~v~d----l~~I~~la~~~gi~lvvD~a~a~~- 192 (398)
T PRK07504 127 --------RYGIESTLVDGLDLDNWEKAVRP-NTKVFFLESPTNPTLEVID----IAAVAKIANQAGAKLVVDNVFATP- 192 (398)
T ss_pred --------hcCeEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCcEecC----HHHHHHHHHHcCCEEEEECCcccc-
Confidence 11122344555689999999975 4566666665555566555 999999999999999999998732
Q ss_pred CCCccccccccCCcccEE--EecccCCC-cccee-eEEeCHHHHhh-ccCCCCcCCCCChHHHHHHHHHHHHHhcCchHH
Q 012368 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPIG-AALVTEKVASA-INYGDHGSTFAGSPLVCNAAIAVLDKISNPAFL 368 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~--t~sK~lg~-G~~iG-~v~~~~~i~~~-~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~ 368 (465)
..... . .++ .|++ +++|.+++ |.++| +++++++++.. +...........+|+.++.++..|+.+ +...
T Consensus 193 ~~~~~--~-~~g--aDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~tl--~~R~ 265 (398)
T PRK07504 193 LFQKP--L-ELG--AHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLKGLETL--PVRV 265 (398)
T ss_pred ccCCc--h-hhC--CCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccchH--HHHH
Confidence 11111 1 123 4665 56799987 88885 66677765542 321111122345777777777766654 2334
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCce------------------eeeccceEEEEEec
Q 012368 369 ASVSKKGHYFKETLKQKLARNPHVK------------------DVRGLGLIIGIEFD 407 (465)
Q Consensus 369 ~~~~~~~~~l~~~l~~~~~~~~~~~------------------~~~~~g~~~~i~~~ 407 (465)
++..++...+.+.|++ +|.+. ..++.|.++.|++.
T Consensus 266 ~~~~~na~~la~~L~~----~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~ 318 (398)
T PRK07504 266 RQQTESAAAIADFLAG----HPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELK 318 (398)
T ss_pred HHHHHHHHHHHHHHHc----CCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeC
Confidence 4445555555555543 33211 12456889999994
No 270
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.76 E-value=5.8e-17 Score=161.76 Aligned_cols=287 Identities=15% Similarity=0.107 Sum_probs=179.8
Q ss_pred cccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCcccccccc
Q 012368 132 HVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALT 211 (465)
Q Consensus 132 ~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~ 211 (465)
+.++.++++...+|+++|+++.+.+..++++||+.|+..++..... ++++||+..+.|.+.........
T Consensus 51 ~~y~r~~~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~~l~al~~-----------~Gd~Vi~~~~~y~~t~~~~~~~~ 119 (391)
T TIGR01328 51 YIYSRLGNPTVSNLEGRIAFLEGTEAAVATSSGMGAIAATLLTILK-----------AGDHLISDECLYGCTFALLEHAL 119 (391)
T ss_pred CceeCCCCchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC-----------CCCEEEEecCcchHHHHHHHHHH
Confidence 4456677888899999999999988889999999999988876541 68899999888754332211110
Q ss_pred CCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 012368 212 SKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG 291 (465)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g 291 (465)
......+.+++.+|++++++++++ ++++|++|..+++.|.+.+ +++|.++|+++|+++|+||++..
T Consensus 120 ---------~~~G~~~~~vd~~d~e~l~~~i~~-~tklV~le~p~Np~G~v~d----l~~I~~la~~~gi~livD~a~a~ 185 (391)
T TIGR01328 120 ---------TKFGIQVDFINMAIPEEVKAHIKD-NTKIVYFETPANPTMKLID----MERVCRDAHSQGVKVIVDNTFAT 185 (391)
T ss_pred ---------hcCCeEEEEECCCCHHHHHHhhcc-CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCch
Confidence 011233456666789999999975 4667777665555566554 89999999999999999999863
Q ss_pred CCCCCccccccccCCcccEE--EecccCCC-ccc-eeeEEeCHHHHhhccCCC--CcCCCCChHHHHHHHHHHHHHhcCc
Q 012368 292 LGRTGYLWAHEHYGIFPDIM--TLAKPLAG-GLP-IGAALVTEKVASAINYGD--HGSTFAGSPLVCNAAIAVLDKISNP 365 (465)
Q Consensus 292 ~gr~g~~~~~~~~~~~pdi~--t~sK~lg~-G~~-iG~v~~~~~i~~~~~~~~--~~~t~~~~~~~~~aa~a~L~~~~~~ 365 (465)
. ..+.. .+...|++ +++|.+++ |.+ .|++++++++++.+.... .......+|+.++.++..|+.+ +
T Consensus 186 ~-~~~~~-----~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~tl--~ 257 (391)
T TIGR01328 186 P-MLTNP-----VALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLKTL--N 257 (391)
T ss_pred h-ccCCc-----hhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCcH--H
Confidence 2 22221 12235665 56799986 655 578888888887765311 1112334666666655555432 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCce------------------eeeccceEEEEEecCChH---HHHHHHH--HCCc
Q 012368 366 AFLASVSKKGHYFKETLKQKLARNPHVK------------------DVRGLGLIIGIEFDVSAT---PVVDACR--DSGL 422 (465)
Q Consensus 366 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~------------------~~~~~g~~~~i~~~~~~~---~~~~~l~--~~Gv 422 (465)
...++..++..++.+.|++ +|.+. ..++.|.++.|+++.... +|.+.|. ..+.
T Consensus 258 ~r~~~~~~na~~la~~L~~----~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~ 333 (391)
T TIGR01328 258 IRMKRHSENAMKVAEYLKS----HPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAGAKKLLNNLKLIRLAV 333 (391)
T ss_pred HHHHHHHHHHHHHHHHHHh----CCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHHHHHHHHhCCcceEec
Confidence 3355556666666665544 33211 124668899999843322 3333332 1111
Q ss_pred eE--------eec---------------C-CCCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 423 LV--------LTA---------------G-KGNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 423 ~v--------~~~---------------~-~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
-+ .|. | ..+.+|+++.+. +.+.+++-|+++|..
T Consensus 334 s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE----~~~dl~~dl~~al~~ 390 (391)
T TIGR01328 334 SLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGLE----DADDLIADLKQALDA 390 (391)
T ss_pred CCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCcC----CHHHHHHHHHHHHhh
Confidence 11 010 0 125789987764 566677777777754
No 271
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.76 E-value=4.8e-17 Score=152.23 Aligned_cols=338 Identities=19% Similarity=0.225 Sum_probs=219.1
Q ss_pred EEeeeccEEEeCCCCEEEecccCcccccCCC-CCHHHHHHHHHHHhhccccc---C--CCCCHHHHHHHHHHHhhcCCCe
Q 012368 84 LASGKGCKLYDAEGREYLDLSSGIAVNALGH-GDADWIKAVVDQANVLTHVS---N--MYYSIPQIELAKRLVACSFADR 157 (465)
Q Consensus 84 ~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~---~--~~~~~~~~~la~~l~~~~~~~~ 157 (465)
++..-+.+++ .||++++.|.+... ||. .++++.+.+...+++++.+. . ++..+.+.+++++|++.+|.+.
T Consensus 81 ~e~~~~~~~~-i~G~~~~N~aS~Nf---L~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E~ 156 (467)
T KOG1358|consen 81 LESVMLPHVT-IDGKDVLNFASANF---LGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTED 156 (467)
T ss_pred cccccCCceE-ecCceeecccchhh---hhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCcc
Confidence 4444444443 69999999998544 554 77999999999999864432 1 2233458899999999999655
Q ss_pred EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHH
Q 012368 158 VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEA 237 (465)
Q Consensus 158 v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 237 (465)
.++-+-|-.++..++.+.. .+..|++.+..-+=.....+.++ ...+.++.+||+++
T Consensus 157 aivYs~gF~ti~S~ipafs------------KrGDIi~~de~~nfaIq~GlqlS------------RS~i~~Fkhndm~~ 212 (467)
T KOG1358|consen 157 AIVYSYGFSTIESAIPAFS------------KRGDIIFVDEAVNFAIQKGLQLS------------RSTISYFKHNDMED 212 (467)
T ss_pred eeeeccccchhhhcchhhh------------ccCcEEEEehhhhHHHHHHHhhh------------hheeEEecCCCHHH
Confidence 5555557778888888554 24456665544322211111111 13455678899999
Q ss_pred HHhhcCCCC------------eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-C-CCCCCccccccc
Q 012368 238 TRKLIQPGK------------TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC-G-LGRTGYLWAHEH 303 (465)
Q Consensus 238 le~~l~~~~------------~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g-~gr~g~~~~~~~ 303 (465)
+|+.+.... ...+++|....|.|.+.| +.+|.++..||...+|.||.++ | +|++|.+ ..++
T Consensus 213 lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p----l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrG-vteH 287 (467)
T KOG1358|consen 213 LERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP----LPEIVKLKNKYKFRVILDESLSFGVLGKTGRG-VTEH 287 (467)
T ss_pred HHHhccCcchhhhhccccccceEEEEEEeeccCCCcccc----cHHHHHHHhhheEEEEEecccccccccccCcc-cccc
Confidence 988875222 567899999999999988 9999999999999999999987 1 3444544 5778
Q ss_pred cCCc---ccEEEec--ccCCCccceeeEEeCHHHHhhccCCCCcCCCC--ChHHHHHHHHHHHHHhcC-chHHHHHHHHH
Q 012368 304 YGIF---PDIMTLA--KPLAGGLPIGAALVTEKVASAINYGDHGSTFA--GSPLVCNAAIAVLDKISN-PAFLASVSKKG 375 (465)
Q Consensus 304 ~~~~---pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~--~~~~~~~aa~a~L~~~~~-~~~~~~~~~~~ 375 (465)
+++. .|+++.| -+++. ..|+.+|+.-+.++-+-...+..|+ .+|....||..++..+++ ++..+.+++..
T Consensus 288 ~~v~~~~iDiv~~sm~~alas--~GgFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~ 365 (467)
T KOG1358|consen 288 FGVPITDIDIVTASMETALAS--GGGFCAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKV 365 (467)
T ss_pred CCCCccceeeeeecccccccc--cCceeecceeeEeeeeccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhhhccc
Confidence 8774 5677654 44542 2255566544443322223344444 457777788888887754 66777777777
Q ss_pred HHHHHHHHHHHHcCCCceeeeccceEEEEEecC------C----hHHHHHHHHHCCceEeecC---------CCCEEEEe
Q 012368 376 HYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV------S----ATPVVDACRDSGLLVLTAG---------KGNVVRLV 436 (465)
Q Consensus 376 ~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~------~----~~~~~~~l~~~Gv~v~~~~---------~~~~lRi~ 436 (465)
..+...|... -.....-.....++.+.+.. + ..++++.++.+|+++.... ....+|++
T Consensus 366 ~~~H~~l~~~---s~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~ 442 (467)
T KOG1358|consen 366 AKFHAALSSN---SGFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRIC 442 (467)
T ss_pred cccchhhhcC---CceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEE
Confidence 7776666542 11111112223334444421 1 2346666666788876431 13469999
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHH
Q 012368 437 PPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 437 ~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
++..++++|++++.+.|+++...
T Consensus 443 ~~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 443 VSAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred EeCCCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999887654
No 272
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.76 E-value=6.2e-16 Score=139.99 Aligned_cols=312 Identities=15% Similarity=0.128 Sum_probs=186.1
Q ss_pred CCHHHHHHHHHHHhhcC----CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 138 YSIPQIELAKRLVACSF----ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 138 ~~~~~~~la~~l~~~~~----~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
.......|+..+.+.+| .+.|.+|||...|-..++.+...++. ++ ..+.-++-..|.|-|+.+..+.-.--
T Consensus 76 ~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~s--dG---~~k~illPLaPeYiGY~d~~l~~d~f 150 (417)
T COG3977 76 KAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRS--DG---TEKKILLPLAPEYIGYADAGLEEDLF 150 (417)
T ss_pred hhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccC--CC---cceeEeeccChhhccccccccCccce
Confidence 34457788888888887 67899999998888877775543221 11 12334455688999887654431110
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcc-cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEP-IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
..+++...-+ +...|--+.|.++|+- .+.+.+|++.- .|++|.+ .+.+++.+|.+++++||+.||+|.+|. .
T Consensus 151 Vs~kP~iel~-~~g~FKY~vDF~~l~i---~e~~g~ic~SRPtNPTGNV--lTdeE~~kldalA~~~giPliIDnAYg-~ 223 (417)
T COG3977 151 VSAKPNIELL-PAGQFKYHVDFEHLHI---GESTGAICVSRPTNPTGNV--LTDEELAKLDALARQHGIPLIIDNAYG-V 223 (417)
T ss_pred eeccCCcccc-cccceeeccCHHHccc---ccccceEEecCCCCCCCCc--ccHHHHHHHHHHhhhcCCcEEEecccC-C
Confidence 1111111111 1111111237777642 24567776654 5555543 488999999999999999999999985 3
Q ss_pred CCCCccccccccCCcccEE---EecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchH--
Q 012368 293 GRTGYLWAHEHYGIFPDIM---TLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAF-- 367 (465)
Q Consensus 293 gr~g~~~~~~~~~~~pdi~---t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~-- 367 (465)
-+.+.-|.-...-..++++ ++||.=-.|.|+|.+++++++++.+.......+.....++.+.+...++...--.+
T Consensus 224 PFP~iifsd~~~~w~~NiilC~SLSK~GLPG~R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlse 303 (417)
T COG3977 224 PFPGIIFSDATPLWNENIILCMSLSKLGLPGSRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSE 303 (417)
T ss_pred CCCceecccccccCCCCEEEEeehhhcCCCCcceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHH
Confidence 2333322111111234443 45663224899999999999999886533222333333444444444442111111
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHcCCCceeeeccce-EEEEEe---cCChHHHHHHHHHCCceEeecC------------
Q 012368 368 ---LASVSKKGHYFKETLKQKLARNPHVKDVRGLGL-IIGIEF---DVSATPVVDACRDSGLLVLTAG------------ 428 (465)
Q Consensus 368 ---~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~-~~~i~~---~~~~~~~~~~l~~~Gv~v~~~~------------ 428 (465)
..-.+++.+.....|++.+.+.+.... ++.|. |.|+.| +....++.++|.++||++.|+.
T Consensus 304 qVIrPFY~~~~q~~~~~l~~~lp~~~~~iH-kpEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH 382 (417)
T COG3977 304 QVIRPFYRNRVQTTIAILRRYLPEYRCLIH-KPEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPH 382 (417)
T ss_pred HhhhHHHHHHHHHHHHHHHHhcCccceeee-cCCcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCC
Confidence 112223333334444444444443222 34454 455555 4667899999999999999873
Q ss_pred CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhhcC
Q 012368 429 KGNVVRLVPPLIISEQELDQAVEILCKTLPVLDSNS 464 (465)
Q Consensus 429 ~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~~ 464 (465)
.+.++|+ +++-+++.|+..+.+|.+.+++.-++.
T Consensus 383 ~hqC~Rm--n~~~~~~~ie~Gva~lae~ve~~yq~~ 416 (417)
T COG3977 383 THQCMRM--NYVPEPEKIEKGVAILAEEVERAYQEV 416 (417)
T ss_pred ccceEEE--ecCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 1457877 678899999999999999998877664
No 273
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.76 E-value=3.7e-17 Score=145.06 Aligned_cols=289 Identities=17% Similarity=0.211 Sum_probs=182.7
Q ss_pred CCHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCC
Q 012368 138 YSIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEH 215 (465)
Q Consensus 138 ~~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~ 215 (465)
+.....++...+++--+ .|.+....|..|.+++.+|..+. +++++|+...|+|.-++..+.. .+...
T Consensus 67 ~d~rnk~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~----------PGkeKIl~cPPtysMY~v~A~i-Nd~eV 135 (375)
T KOG0633|consen 67 PDPRNKRLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCD----------PGKEKILDCPPTYSMYVVDAAI-NDAEV 135 (375)
T ss_pred CCcccchhhhhcccCCCCCccceEEecCcHHHHHHHHhheec----------CCccceeecCCcceeEEEEeec-CCceE
Confidence 33334556666665555 78999999999999999998873 2469999999999666544322 11111
Q ss_pred cCCCCCCCCCCceEeeCCCHHHHHhhcCC-CCeEEEE-EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 216 YRSPFEPVMPGVNFVEYGNIEATRKLIQP-GKTAAVF-VEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~-~~~a~vi-~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
.. .|+.+.+.. |.+++.+.++. ..+++++ +.|.|++|. +. ..+.+.+|.+.-+ +.++++||+|-+|.
T Consensus 136 vk---vpl~pdF~l----nvdai~evl~~ds~iK~~F~tSPgNPtg~-~i-k~~di~KiLe~p~--nglVVvDEAYidFs 204 (375)
T KOG0633|consen 136 VK---VPLNPDFSL----NVDAIAEVLELDSKIKCIFLTSPGNPTGS-II-KEDDILKILEMPD--NGLVVVDEAYIDFS 204 (375)
T ss_pred EE---ecCCCCccc----cHHHHHHHHhccccceEEEEcCCCCCCcc-cc-cHHHHHHHHhCCC--CcEEEEeeeeEeec
Confidence 11 122232221 78888888873 3565554 555565554 33 6666777776554 78999999999883
Q ss_pred CCCccccccccCCcccEE---EecccCC-CccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHH
Q 012368 294 RTGYLWAHEHYGIFPDIM---TLAKPLA-GGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLA 369 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~---t~sK~lg-~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~ 369 (465)
|.........-.|+++ ||||++| +|+|+|+...+.++.+.+.. ....|+.+.++..+|+++|..-. -...+
T Consensus 205 --g~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~--~KaPYNiS~~~s~~AL~Als~~n-~kkme 279 (375)
T KOG0633|consen 205 --GVESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNR--AKAPYNISVAGSVAALAALSDSN-GKKME 279 (375)
T ss_pred --cccccchHhHhCCceeehhhhhhhcCcceeEeecccccHHHHHHHHh--ccCCccccchhHHHHHHhcCccc-chHHH
Confidence 3222222223346655 6899999 69999999999998887763 34567778888888888886211 11222
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCceee--eccceEEEEEec-CC---hHHH-HHHHHHCCceEeecCC----CCEEEEecC
Q 012368 370 SVSKKGHYFKETLKQKLARNPHVKDV--RGLGLIIGIEFD-VS---ATPV-VDACRDSGLLVLTAGK----GNVVRLVPP 438 (465)
Q Consensus 370 ~~~~~~~~l~~~l~~~~~~~~~~~~~--~~~g~~~~i~~~-~~---~~~~-~~~l~~~Gv~v~~~~~----~~~lRi~~~ 438 (465)
.++...-+-+.+|-..+...+..... ....+|+.++.. .+ +..+ .+.+-+.||.++-.+. .+++|++
T Consensus 280 ~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRit-- 357 (375)
T KOG0633|consen 280 DVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRIT-- 357 (375)
T ss_pred HHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEE--
Confidence 23332223333343444444544322 234567777772 21 2233 3334468999987653 4689997
Q ss_pred CCCcHHHHHHHHHHHHHH
Q 012368 439 LIISEQELDQAVEILCKT 456 (465)
Q Consensus 439 ~~~t~e~i~~~l~~l~~~ 456 (465)
..|+|+.+.+++.++++
T Consensus 358 -vGt~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 358 -VGTPEENTVLMKCLKQF 374 (375)
T ss_pred -cCCcccchHHHHHHHhh
Confidence 56888888888888765
No 274
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.76 E-value=1.2e-16 Score=159.84 Aligned_cols=237 Identities=18% Similarity=0.139 Sum_probs=155.4
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
++.++++...+|+++|+++.+.+.+++++||+.|+..++..+.. ++++||+....|.+.........
T Consensus 64 Y~r~~~p~~~~le~~lA~l~g~~~al~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~~~~t~~~~~~~~-- 130 (403)
T PRK07810 64 YSRYGNPTVSMFEERLRLIEGAEACFATASGMSAVFTALGALLG-----------AGDRLVAARSLFGSCFVVCNEIL-- 130 (403)
T ss_pred eeCCCCchHHHHHHHHHHHhCCCcEEEECChHHHHHHHHHHHhC-----------CCCEEEEccCCcchHHHHHHHHH--
Confidence 45677888899999999999988999999999999998876542 68889888765533321111100
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
......+.+++..|++++++++++ ++++|++|..++..|.+.+ +++|.++|+++|+++|+||+|...
T Consensus 131 -------~~~G~~v~~vd~~d~~~l~~ai~~-~tklV~~esp~Nptg~v~d----l~~I~~la~~~g~~vivD~a~a~~- 197 (403)
T PRK07810 131 -------PRWGVETVFVDGEDLSQWEEALSV-PTQAVFFETPSNPMQSLVD----IAAVSELAHAAGAKVVLDNVFATP- 197 (403)
T ss_pred -------HHcCcEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCCcc-
Confidence 011234556666799999999975 4667777766656666655 999999999999999999998632
Q ss_pred CCCccccccccCCcccEEE--ecccCCC-ccce-eeEEeCHHHHh-hccCCCCcCCCCChHHHHHHHHHHHHHhcCchHH
Q 012368 294 RTGYLWAHEHYGIFPDIMT--LAKPLAG-GLPI-GAALVTEKVAS-AINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFL 368 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~t--~sK~lg~-G~~i-G~v~~~~~i~~-~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~ 368 (465)
..... . ..+ .|+++ ++|.++| |.++ |+++++++.+. .+...........+|+.++.++..|+.+ +...
T Consensus 198 ~~~~~--~-~~g--aDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~tl--~~R~ 270 (403)
T PRK07810 198 LLQRG--L-PLG--ADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLETL--ALRV 270 (403)
T ss_pred ccCCh--h-hcC--CcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccCcH--HHHH
Confidence 11111 1 123 47664 5699987 7776 77888876554 2322111222346788777777777643 2334
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCceee------------------eccceEEEEEec
Q 012368 369 ASVSKKGHYFKETLKQKLARNPHVKDV------------------RGLGLIIGIEFD 407 (465)
Q Consensus 369 ~~~~~~~~~l~~~l~~~~~~~~~~~~~------------------~~~g~~~~i~~~ 407 (465)
++..++..++.+.| +.+|.+..| .+.|.++.++++
T Consensus 271 ~~~~~~a~~~a~~L----~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~ 323 (403)
T PRK07810 271 RHSNASALRIAEFL----EGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELD 323 (403)
T ss_pred HHHHHHHHHHHHHH----hcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEc
Confidence 44445555554444 444533322 267889999984
No 275
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.76 E-value=2.4e-16 Score=157.96 Aligned_cols=218 Identities=17% Similarity=0.133 Sum_probs=144.4
Q ss_pred ccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccC
Q 012368 133 VSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (465)
Q Consensus 133 ~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (465)
.++.++.+...+|+++|+++.+.+..+.++||+.|+.++++... .++++||+..+.|.+ +.......
T Consensus 58 ~y~r~~~p~~~~le~~lA~l~g~~~~i~~~sG~~Al~~~l~~ll-----------~~Gd~Viv~~~~y~~-t~~~~~~~- 124 (403)
T PRK07503 58 FYSRISNPTLALLEQRMASLEGGEAAVALASGMGAITATLWTLL-----------RPGDEVIVDQTLYGC-TFAFLHHG- 124 (403)
T ss_pred eeeCCCCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHc-----------CCCCEEEEccCccch-HHHHHHHH-
Confidence 34566777789999999999987777888899999999887553 168899999887733 22211100
Q ss_pred CCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 213 KEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
.......+.+++..|++++++++++ ++++|+++..++..|.+.+ +++|.++|+++|+++|+|++|...
T Consensus 125 -------~~~~G~~v~~vd~~d~~~l~~~i~~-~tklV~le~p~NPtG~~~d----i~~I~~la~~~gi~lIvD~a~a~~ 192 (403)
T PRK07503 125 -------LGEFGVTVRHVDLTDPAALKAAISD-KTRMVYFETPANPNMRLVD----IAAVAEIAHGAGAKVVVDNTYCTP 192 (403)
T ss_pred -------HhhCCEEEEEeCCCCHHHHHHhcCc-cCcEEEEeCCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCccc
Confidence 0011233455666789999999975 4667777655555566554 899999999999999999999742
Q ss_pred CCCCccccccccCCcccEE--EecccCCC-c-cceeeEEeCHHHHhhccCC--CCcCCCCChHHHHHHHHHHHHHhcCch
Q 012368 293 GRTGYLWAHEHYGIFPDIM--TLAKPLAG-G-LPIGAALVTEKVASAINYG--DHGSTFAGSPLVCNAAIAVLDKISNPA 366 (465)
Q Consensus 293 gr~g~~~~~~~~~~~pdi~--t~sK~lg~-G-~~iG~v~~~~~i~~~~~~~--~~~~t~~~~~~~~~aa~a~L~~~~~~~ 366 (465)
..+... +...|++ +++|.+++ | .+.|++++++++++.+... ........+++.++.++..|+.+ +.
T Consensus 193 -~~~~~l-----~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~tl--~~ 264 (403)
T PRK07503 193 -YLQRPL-----ELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKTL--AL 264 (403)
T ss_pred -ccCCch-----hhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcchH--HH
Confidence 222221 2234655 57799997 5 7889999888888777521 22223556777777666655543 22
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012368 367 FLASVSKKGHYFKETLK 383 (465)
Q Consensus 367 ~~~~~~~~~~~l~~~l~ 383 (465)
..++..++...+.+.|+
T Consensus 265 r~~~~~~na~~~a~~L~ 281 (403)
T PRK07503 265 RMDRHCASAQAVAEWLA 281 (403)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 23333444555444444
No 276
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.76 E-value=1.4e-16 Score=159.05 Aligned_cols=287 Identities=18% Similarity=0.151 Sum_probs=169.8
Q ss_pred cccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCcccccccc
Q 012368 132 HVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALT 211 (465)
Q Consensus 132 ~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~ 211 (465)
+.++.++++...+|++++++..+.+.+++++||++|+.+++..+.. ++|+||+.++.|.+.........
T Consensus 57 ~~Y~r~~~pt~~~Le~~lA~l~g~~~~l~~~sgt~Ai~~~l~al~~-----------~GD~Vl~~~~~y~~~~~~~~~~~ 125 (394)
T PRK07050 57 WRYGLHATPTSLALAQRLAEIEGGRHALLQPSGLAAISLVYFGLVK-----------AGDDVLIPDNAYGPNRDHGEWLA 125 (394)
T ss_pred cccCCCCCHHHHHHHHHHHHHhCCCeEEEeccHHHHHHHHHHHHhC-----------CCCEEEEecCCcccHHHHHHHHH
Confidence 3456778888999999999999999999999999999999986642 68999999999976542110100
Q ss_pred CCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 012368 212 SKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG 291 (465)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g 291 (465)
......+.+++..+.++++++++++ +++|++|..++..+ +...+++|.++|+++|+++|+|++|..
T Consensus 126 ---------~~~Gi~v~~vd~~~~~~l~~~i~~~-tklV~le~p~Np~~----~~~di~~I~~ia~~~gi~livD~a~a~ 191 (394)
T PRK07050 126 ---------RDFGITVRFYDPLIGAGIADLIQPN-TRLIWLEAPGSVTM----EVPDVPAITAAARARGVVTAIDNTYSA 191 (394)
T ss_pred ---------HhcCeEEEEECCCCHHHHHHhcCCC-CeEEEEECCCCCCc----cHhhHHHHHHHHHHcCCEEEEECCccc
Confidence 0111223344444668899999754 56666664433333 344599999999999999999999863
Q ss_pred CCCCCccccccccCCcccEE--EecccCCCc--cceeeEEe-CHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCch
Q 012368 292 LGRTGYLWAHEHYGIFPDIM--TLAKPLAGG--LPIGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPA 366 (465)
Q Consensus 292 ~gr~g~~~~~~~~~~~pdi~--t~sK~lg~G--~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~ 366 (465)
. .. +.......|++ +++|.++|| .+.|++++ ++++++.+.........+.+|..+..++..|+.+ ..
T Consensus 192 ~-~~-----~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~tl--~~ 263 (394)
T PRK07050 192 G-LA-----FKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGLPSL--QV 263 (394)
T ss_pred c-cc-----cCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCcH--HH
Confidence 1 11 11111223655 578999863 67888776 5777776643222122244555443333222211 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCce------------------eeeccceEEEEEecC-----ChHHHHHHHHHCCce
Q 012368 367 FLASVSKKGHYFKETLKQKLARNPHVK------------------DVRGLGLIIGIEFDV-----SATPVVDACRDSGLL 423 (465)
Q Consensus 367 ~~~~~~~~~~~l~~~l~~~~~~~~~~~------------------~~~~~g~~~~i~~~~-----~~~~~~~~l~~~Gv~ 423 (465)
.+++..++..++.+.|+ ++|.+. ...+.|.++.+.+.. ...+|.+.|...++-
T Consensus 264 Rl~~~~~~a~~la~~L~----~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~~~~ 339 (394)
T PRK07050 264 RLAAHDRSALEVAEWLK----ARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELFAIG 339 (394)
T ss_pred HHHHHHHHHHHHHHHHH----hCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCCeec
Confidence 23333444444444443 333221 123557788888742 133455555443322
Q ss_pred Ee---------ecC-----------CCCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 424 VL---------TAG-----------KGNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 424 v~---------~~~-----------~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
+. |.. .++.+||++.+.. .+.+++-|+++|..
T Consensus 340 ~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGlE~----~~dl~~dl~~al~~ 391 (394)
T PRK07050 340 WSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGLED----EADLIADLEQALEA 391 (394)
T ss_pred cccCCccceEeeCcccccchhhcCCCCCEEEEEeCcCC----HHHHHHHHHHHHHH
Confidence 21 210 1357899887654 44455555555543
No 277
>PRK06460 hypothetical protein; Provisional
Probab=99.76 E-value=1.6e-16 Score=157.88 Aligned_cols=290 Identities=18% Similarity=0.176 Sum_probs=171.0
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+....++...+|++++++..+.+..+.++||++|+..++.... .++++||+..+.|.+.........
T Consensus 39 y~r~~~p~~~~L~~~lA~l~g~~~~v~~~sG~~ai~~~l~al~-----------~~Gd~Vl~~~~~~~~ty~~~~~~~-- 105 (376)
T PRK06460 39 YSREANPTVLELTKKIVELENAEMGVAFSSGMGAISTTALALL-----------KPGNSVLVHRDMFGRSYRFFTDYL-- 105 (376)
T ss_pred eeCCCCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHh-----------CCCCEEEEecCCcCcHHHHHHHHH--
Confidence 4555667788999999999985555666888999998887654 168899998876643221111000
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
......+..++.++.+.+++++++ ++++|+++..+++.|.+.+ +++|.++|++||+++|+||+|..+
T Consensus 106 -------~~~G~~v~~~~~~~~~~l~~~~~~-~tklV~l~sp~NPtG~v~d----~~~I~~la~~~g~~vivDea~~~~- 172 (376)
T PRK06460 106 -------KNWGVNVDASNPGSDNIIEKAKSK-RYDVVFVENITNPLLRVVD----ITELSKVCKENGSILIVDATFSTP- 172 (376)
T ss_pred -------HhhCcEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCcCcc-
Confidence 001122344555565666666554 4566666665555566555 778999999999999999998643
Q ss_pred CCCccccccccCCcccEE--EecccCCC--ccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHH
Q 012368 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG--GLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLA 369 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~--t~sK~lg~--G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~ 369 (465)
..... . ..+ .|++ ++||+++| +.++|++++++++++.+.......+.+.+|..+..++..++.+ +...+
T Consensus 173 ~~~~~--l-~~~--~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~~~~~~a~~~l~~~~~l--~~r~~ 245 (376)
T PRK06460 173 INQKP--L-ELG--ADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTSLDPHAAYLTLRGIKTL--KIRMD 245 (376)
T ss_pred ccCCh--h-hcC--CCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhH--HHHHH
Confidence 11111 1 123 3554 68899975 3789999999998887754322223334554444433334333 24456
Q ss_pred HHHHHHHHHHHHHHHHH--H--cCCCce----------eeeccceEEEEEecCC---hHHHHHHHH--HCCceE------
Q 012368 370 SVSKKGHYFKETLKQKL--A--RNPHVK----------DVRGLGLIIGIEFDVS---ATPVVDACR--DSGLLV------ 424 (465)
Q Consensus 370 ~~~~~~~~l~~~l~~~~--~--~~~~~~----------~~~~~g~~~~i~~~~~---~~~~~~~l~--~~Gv~v------ 424 (465)
++.++.+++.+.|++.. . .+|... ...+.|.++.++++.. ..+|.+.|. ..++-+
T Consensus 246 ~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~~l~~~~~~~s~Gg~~sl 325 (376)
T PRK06460 246 VINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKVMKSLKLIIPAQTLGGVNSV 325 (376)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHHHHhCCcceeccCCCCCceE
Confidence 66666766666665420 0 011111 1246789999999533 223443331 111111
Q ss_pred --eec---------------C-CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 425 --LTA---------------G-KGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 425 --~~~---------------~-~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
.|. | .++.+|+++.+. +.+.+++.|+++|..+
T Consensus 326 ~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE----~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 326 ISHPATMSHRTLSLEERKIVGITDSLLRLSVGIE----DVNDLIEDLDRALSTL 375 (376)
T ss_pred EeCccccccccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHHhh
Confidence 111 1 135799987754 5666677777777543
No 278
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.76 E-value=4.2e-16 Score=154.65 Aligned_cols=289 Identities=15% Similarity=0.099 Sum_probs=175.8
Q ss_pred cccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCcccccccc
Q 012368 132 HVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALT 211 (465)
Q Consensus 132 ~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~ 211 (465)
+.+++++++...+|+++|+++.+.+.+++++||++|+..++..+.. ++++|++.++.|.+.........
T Consensus 45 ~~Y~R~~npt~~~Le~~lA~leg~e~ivvt~gg~~Ai~~~l~all~-----------~Gd~Il~~~~~y~~~~~~~~~~~ 113 (388)
T PRK08861 45 YDYTRSGNPNRGLLEQTLSELESGKGAVVTNCGTSALNLWVSALLG-----------PDDLIVAPHDCYGGTYRLFNTRA 113 (388)
T ss_pred ccccCCCCchHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHcC-----------CCCEEEEcCCchHHHHHHHHHHH
Confidence 3456778888999999999999999999999999999999986642 68999999999965432111110
Q ss_pred CCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 012368 212 SKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG 291 (465)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g 291 (465)
. .....+.+++..|++++++++++ ++++|+++..++..|.+.+ +++|.++|+++|+++|+||+|..
T Consensus 114 ~---------~~gi~v~~vd~~d~e~l~~~i~~-~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~vIvDea~~~ 179 (388)
T PRK08861 114 N---------KGDFKVQFVDQSDAAALDAALAK-KPKLILLETPSNPLVRVVD----IAELCQKAKAVGALVAVDNTFLT 179 (388)
T ss_pred h---------cCCeEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCccc
Confidence 0 00112334444689999999975 4566666544444555555 88999999999999999999863
Q ss_pred CCCCCccccccccCCcccEEE--ecccCCC-c-cceeeEEeC-HHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCch
Q 012368 292 LGRTGYLWAHEHYGIFPDIMT--LAKPLAG-G-LPIGAALVT-EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPA 366 (465)
Q Consensus 292 ~gr~g~~~~~~~~~~~pdi~t--~sK~lg~-G-~~iG~v~~~-~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~ 366 (465)
. .... ......|+++ ++|.++| + ...|+++++ +++.+.+...........+|+.+...+-.|+.+ .-
T Consensus 180 ~-~~~~-----pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~Tl--~l 251 (388)
T PRK08861 180 P-VLQK-----PLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGIRTL--GA 251 (388)
T ss_pred c-ccCC-----CcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcCCCH--HH
Confidence 2 1111 1123457664 5699987 3 678888774 566655542222222345676665544444322 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCce------------------eeeccceEEEEEecCChH---HHHHHHH--HCCce
Q 012368 367 FLASVSKKGHYFKETLKQKLARNPHVK------------------DVRGLGLIIGIEFDVSAT---PVVDACR--DSGLL 423 (465)
Q Consensus 367 ~~~~~~~~~~~l~~~l~~~~~~~~~~~------------------~~~~~g~~~~i~~~~~~~---~~~~~l~--~~Gv~ 423 (465)
.+++..++...+.+.|+ .+|.+. ...+.|.++.|++..... +|.+.|. ..++-
T Consensus 252 R~~~~~~~a~~~a~~L~----~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~~f~~~l~l~~~~~s 327 (388)
T PRK08861 252 RMRVHEESAQQILAYLQ----TQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVKALALFSLAES 327 (388)
T ss_pred HHHHHHHHHHHHHHHHH----hCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHHHHHhcCCcceEccC
Confidence 23444444444444443 444221 124678899999843222 3333322 11111
Q ss_pred E--------eec---------------C-CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 424 V--------LTA---------------G-KGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 424 v--------~~~---------------~-~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
+ .|. | .++.+|+++.+. +.+.+++-|+++|+.+.
T Consensus 328 ~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE----~~~dli~Dl~~al~~~~ 385 (388)
T PRK08861 328 LGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGLE----DAQDLIADLDQAFAKAA 385 (388)
T ss_pred CCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCcC----CHHHHHHHHHHHHHHHH
Confidence 1 110 1 135799987764 56666777777776554
No 279
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.76 E-value=6.8e-16 Score=158.16 Aligned_cols=325 Identities=15% Similarity=0.117 Sum_probs=191.8
Q ss_pred CCCHHHHHHHHHHHhhcccccCCCC--------CHHHHHHHHHHHhhcCCCeE-EecCCHHHHHHHHHHHHHHHhhhcCC
Q 012368 114 HGDADWIKAVVDQANVLTHVSNMYY--------SIPQIELAKRLVACSFADRV-FFSNTGTEANEAAIKFARKFQRHSNP 184 (465)
Q Consensus 114 h~~p~v~~a~~~~~~~~~~~~~~~~--------~~~~~~la~~l~~~~~~~~v-~~~~sG~eA~~~al~~a~~~t~~~~~ 184 (465)
|.+|.|++++.+...... ++.|. .+...++.+++++.++.+.+ ++.++|+.+...++.+++.+....+.
T Consensus 81 ~~~p~i~~~~~~~~~~~~--~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd 158 (481)
T PRK04366 81 KYNPKINEKVARLPGFAE--LHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGD 158 (481)
T ss_pred CCCHHHHHHHHhCcchhc--CCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCc
Confidence 577888888887522211 12221 12366788888888885544 44456766665554444433211110
Q ss_pred CCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccC
Q 012368 185 DSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSA 264 (465)
Q Consensus 185 ~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~ 264 (465)
.++++|++.++.|+.+...+ ...+..... .+...+.. .|+++|++++.++..++++..|+ ..|.+
T Consensus 159 ---~~~~~Vlv~~~~hp~~~~~~-~~~G~~vv~---v~~~~~~~----~D~e~L~~~i~~~t~~V~v~~Pn--~tG~~-- 223 (481)
T PRK04366 159 ---TKRTEVIVPDSAHGTNPASA-AMAGFKVVE---IPSNEDGL----VDLEALKAAVGEDTAALMLTNPN--TLGLF-- 223 (481)
T ss_pred ---CCCCEEEEcCCccHhHHHHH-HHcCCEEEE---eecCCCCC----cCHHHHHhhcccCCeEEEEeCCC--Ccccc--
Confidence 02458999998776655432 222211111 11111111 28999999997544444444444 34543
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEe--cccCCC-----ccceeeEEeCHHHHhhcc
Q 012368 265 TKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTL--AKPLAG-----GLPIGAALVTEKVASAIN 337 (465)
Q Consensus 265 ~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~--sK~lg~-----G~~iG~v~~~~~i~~~~~ 337 (465)
...+++|.++|+++|+++|+|+++. .+..|.. ....+ ..|++++ -|++++ |-.+|++.+++++.+.+.
T Consensus 224 -~~dl~eI~~~a~~~gal~iVD~a~~-~~~~g~~-~~~~~--GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp 298 (481)
T PRK04366 224 -ERNILEIAEIVHEAGGLLYYDGANL-NAILGKA-RPGDM--GFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLP 298 (481)
T ss_pred -chHHHHHHHHHHHcCCEEEEEecCh-hhhcccC-Ccccc--CCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCC
Confidence 1238999999999999999999985 2222221 11223 3588765 398862 355778888887776653
Q ss_pred CCC-------------------CcCCCCChHHHHHHHHHHHHHhcCchH---HHHHHHHHHHHHHHHHHHHHcCCCceee
Q 012368 338 YGD-------------------HGSTFAGSPLVCNAAIAVLDKISNPAF---LASVSKKGHYFKETLKQKLARNPHVKDV 395 (465)
Q Consensus 338 ~~~-------------------~~~t~~~~~~~~~aa~a~L~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 395 (465)
... ..-.++++.+...++...+..+..+++ .++..++.++++++|.++ +....
T Consensus 299 ~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~---~~~~~-- 373 (481)
T PRK04366 299 VPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI---YDLPY-- 373 (481)
T ss_pred CCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh---CcccC--
Confidence 110 001122344555666666666655543 344566778888888775 22111
Q ss_pred eccc-eEEEEEe------cCChHHHHHHHHHCCceEeecC----CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhhcC
Q 012368 396 RGLG-LIIGIEF------DVSATPVVDACRDSGLLVLTAG----KGNVVRLVPPLIISEQELDQAVEILCKTLPVLDSNS 464 (465)
Q Consensus 396 ~~~g-~~~~i~~------~~~~~~~~~~l~~~Gv~v~~~~----~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~~ 464 (465)
.+.. .-+.+.+ +.+..++.+.|.++|+.+.... ..+.+|+++...+|++|||++++.|+++.++..+++
T Consensus 374 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~~~ 453 (481)
T PRK04366 374 DRPCMHEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQIAEEAKENP 453 (481)
T ss_pred CCCeeEEEEEECccccccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHhCc
Confidence 1100 1122221 1357789999999999875221 136799999999999999999999999998887765
Q ss_pred C
Q 012368 465 N 465 (465)
Q Consensus 465 ~ 465 (465)
+
T Consensus 454 ~ 454 (481)
T PRK04366 454 E 454 (481)
T ss_pred H
Confidence 3
No 280
>PRK05968 hypothetical protein; Provisional
Probab=99.76 E-value=6.2e-17 Score=161.56 Aligned_cols=285 Identities=16% Similarity=0.095 Sum_probs=175.1
Q ss_pred ccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccC
Q 012368 133 VSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (465)
Q Consensus 133 ~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (465)
.+..+.++...+|+++++++.+.+..++++||+.|+..++.... .++++||+..+.|++.........
T Consensus 56 ~Y~r~~~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~al~al~-----------~~Gd~Vl~~~~~y~~t~~~~~~~~- 123 (389)
T PRK05968 56 IYSRGDNPTVRAFEEMLAKLEGAEDARGFASGMAAISSTVLSFV-----------EPGDRIVAVRHVYPDAFRLFETIL- 123 (389)
T ss_pred cccCCCChhHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHh-----------CCCCEEEEeCCCchHHHHHHHHHH-
Confidence 34566677789999999999997777778999999998887543 168999999999876432111100
Q ss_pred CCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 213 KEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
......+.+++..|++++++++. ++++|++|...+.. .+...+++|.++|++||+++|+|+++..+
T Consensus 124 --------~~~G~~v~~vd~~d~~~l~~~i~--~tklV~ie~pt~~~----~~~~dl~~i~~la~~~gi~vivD~a~a~~ 189 (389)
T PRK05968 124 --------KRMGVEVDYVDGRDEEAVAKALP--GAKLLYLESPTSWV----FELQDVAALAALAKRHGVVTMIDNSWASP 189 (389)
T ss_pred --------HHcCceEEEeCCCCHHHHHHhcc--cCCEEEEECCCCCC----CcHHHHHHHHHHHHHcCCEEEEECCCcch
Confidence 01112344556668999999983 45677777433332 24456999999999999999999998643
Q ss_pred CCCCccccccccCCcccEE--EecccCCC-c-cceeeEEeCHHHHhhccCCCC-cCCCCChHHHHHHHHHHHHHhcCchH
Q 012368 293 GRTGYLWAHEHYGIFPDIM--TLAKPLAG-G-LPIGAALVTEKVASAINYGDH-GSTFAGSPLVCNAAIAVLDKISNPAF 367 (465)
Q Consensus 293 gr~g~~~~~~~~~~~pdi~--t~sK~lg~-G-~~iG~v~~~~~i~~~~~~~~~-~~t~~~~~~~~~aa~a~L~~~~~~~~ 367 (465)
...... ..+ .|++ +++|.++| | .+.|++++++++++.+..... ......+++.++.++..|+.+ +..
T Consensus 190 -~~~~p~---~~g--~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~tl--~~r 261 (389)
T PRK05968 190 -VFQRPI---TLG--VDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLRTL--PLR 261 (389)
T ss_pred -hccCch---hcC--CcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccCcH--HHH
Confidence 111111 123 3555 56799986 4 678999999888876653111 111334666666665555533 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCceeee-------------ccceEEEEEec--CChHHHHHHHHHCCceEe-------
Q 012368 368 LASVSKKGHYFKETLKQKLARNPHVKDVR-------------GLGLIIGIEFD--VSATPVVDACRDSGLLVL------- 425 (465)
Q Consensus 368 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-------------~~g~~~~i~~~--~~~~~~~~~l~~~Gv~v~------- 425 (465)
.++-.++..++.+ .++.+|.+..+. +.|.++.++++ ....+|++.|...++.+.
T Consensus 262 ~~~~~~~a~~la~----~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~~~~~s~G~~~sl 337 (389)
T PRK05968 262 MKAHEASALEIAR----RLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADALKLFRLGVSWGGHESL 337 (389)
T ss_pred HHHHHHHHHHHHH----HHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhCCccEEecCCCCCCce
Confidence 3333344444444 444555433222 45778888884 234566666654432221
Q ss_pred --ec----------------C-CCCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 426 --TA----------------G-KGNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 426 --~~----------------~-~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
|. | .++.+|+++.+..++ .+++-|+++|+.
T Consensus 338 v~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~----dl~~dl~~al~~ 386 (389)
T PRK05968 338 VVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTE----ALWADLEQALAA 386 (389)
T ss_pred eeeCcccccccCCHHHHHhcCCCCCeEEEEeccCCHH----HHHHHHHHHHHH
Confidence 11 1 135799998876544 455555555544
No 281
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.76 E-value=8.1e-16 Score=153.91 Aligned_cols=237 Identities=15% Similarity=0.139 Sum_probs=153.5
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+..+.++...+|+++|+++.+.+..++++||++|+..++..+.. ++++|++..|.|++..........
T Consensus 54 y~R~~~p~~~~Le~~lA~l~g~~~~v~~~sG~~Ai~~~l~all~-----------pGD~Vvv~~p~Y~~t~~~~~~~~~- 121 (405)
T PRK08776 54 YTRSGNPTRDLLGEALAELEGGAGGVITATGMGAINLVLNALLQ-----------PGDTLVVPHDAYGGSWRLFNALAK- 121 (405)
T ss_pred ccCCCChHHHHHHHHHHHHhCCCceEEEcCHHHHHHHHHHHHhC-----------CCCEEEEccCCchHHHHHHHHHHH-
Confidence 46677777889999999998866667788899999988876642 689999999999764321111100
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
.....+..++..|++++++++++ ++++|+++..++..|.+.+ +++|.++|+++|+++|+||+|....
T Consensus 122 --------~~g~~v~~v~~~d~~~l~~~i~~-~tklV~l~~P~NPtG~v~d----l~~I~~la~~~gi~vIvD~a~a~~~ 188 (405)
T PRK08776 122 --------KGHFALITADLTDPRSLADALAQ-SPKLVLIETPSNPLLRITD----LRFVIEAAHKVGALTVVDNTFLSPA 188 (405)
T ss_pred --------hcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCCcccc
Confidence 01122344555689999999975 4555555443334455443 8999999999999999999986421
Q ss_pred CCCccccccccCCcccEEE--ecccCCC--ccceeeEEe-CHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHH
Q 012368 294 RTGYLWAHEHYGIFPDIMT--LAKPLAG--GLPIGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFL 368 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~t--~sK~lg~--G~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~ 368 (465)
.. .. . ....|+++ .+|.++| +...|++++ ++++.+.+........++.+|+.+.+....++.+ +...
T Consensus 189 ~~-~p--l---~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~tl--~~r~ 260 (405)
T PRK08776 189 LQ-KP--L---EFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGLRTL--DARL 260 (405)
T ss_pred cC-Cc--c---cccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhCcH--HHHH
Confidence 11 11 1 12346664 5699985 377888877 4677666643222233456888888877666543 3345
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCce------------------eeeccceEEEEEec
Q 012368 369 ASVSKKGHYFKETLKQKLARNPHVK------------------DVRGLGLIIGIEFD 407 (465)
Q Consensus 369 ~~~~~~~~~l~~~l~~~~~~~~~~~------------------~~~~~g~~~~i~~~ 407 (465)
++..++...+.+.|++ +|.+. ...+.|.++.+++.
T Consensus 261 ~~~~~na~~la~~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 313 (405)
T PRK08776 261 RVHQENADAIAALLDG----HAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELE 313 (405)
T ss_pred HHHHHHHHHHHHHHHc----CCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEc
Confidence 5566666666555543 33221 12477889999994
No 282
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.75 E-value=2e-16 Score=161.33 Aligned_cols=317 Identities=13% Similarity=0.092 Sum_probs=184.3
Q ss_pred CCHHHHHHHHHHHhh-c--ccccCC--CCCHHHHH----HHHHHHhhcC--CCeEEec---CCHHHHHHHHHHHHHHHhh
Q 012368 115 GDADWIKAVVDQANV-L--THVSNM--YYSIPQIE----LAKRLVACSF--ADRVFFS---NTGTEANEAAIKFARKFQR 180 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~-~--~~~~~~--~~~~~~~~----la~~l~~~~~--~~~v~~~---~sG~eA~~~al~~a~~~t~ 180 (465)
.+|.+++++...+.. + ++.+.. ........ .++++++.++ .+.+.++ +||++||..++..+..
T Consensus 46 ~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~~--- 122 (452)
T PTZ00094 46 TSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALLQ--- 122 (452)
T ss_pred CCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhcC---
Confidence 568899998887754 2 111111 11222222 3346777777 4556566 7999999998886641
Q ss_pred hcCCCCCCCCceEEEEcCCcccCcccccc-ccCCCCcCCCCCCCCCCceEeeC-----CCHHHHHhhcCCCCeEEEEEcc
Q 012368 181 HSNPDSKEPATEFVSFTNSFHGRTMGALA-LTSKEHYRSPFEPVMPGVNFVEY-----GNIEATRKLIQPGKTAAVFVEP 254 (465)
Q Consensus 181 ~~~~~~~~~~~~ii~~~~~yhg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~a~vi~ep 254 (465)
++++|++.+. -||....... +..... ......-.+..++. .|+++|+++++..+.+.|++.
T Consensus 123 --------~gd~Ii~~~~-ehg~~l~~~~~l~~~~~---~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~- 189 (452)
T PTZ00094 123 --------PHDRIMGLDL-PSGGHLTHGFYTAKKKV---SATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAG- 189 (452)
T ss_pred --------CCCEEEeccc-ccCCccccccccccccc---ccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEe-
Confidence 5777777544 4555433211 100000 00000000111111 289999999963334455552
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccc-cccccCCcccEEEec--ccCCCccceeeEEeCHH
Q 012368 255 IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW-AHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEK 331 (465)
Q Consensus 255 ~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~-~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~ 331 (465)
.++.|...+ +++|.++|+++|+++++|++|+ +|..+... ..... ..|++++| |++.|.. .|+++++++
T Consensus 190 -~s~~g~~~d----i~~I~~i~~~~ga~l~vDaaq~-~G~i~~~~~~~~~~--~~D~l~~S~hK~l~GP~-Gg~l~~~~~ 260 (452)
T PTZ00094 190 -ASAYPRDID----YKRFREICDSVGAYLMADIAHT-SGLVAAGVLPSPFP--YADVVTTTTHKSLRGPR-SGLIFYRKK 260 (452)
T ss_pred -CCCCCCccC----HHHHHHHHHHcCCEEEEeccch-hccccCCCCCCCCC--CCcEEEcCCccCCCCCC-ceEEEEecc
Confidence 234555555 8999999999999999999997 55443211 11111 46888765 9997644 377777765
Q ss_pred HHhhccCC---CCcCCC--CChHHHHHHHHHHHHHhcC---chHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEE
Q 012368 332 VASAINYG---DHGSTF--AGSPLVCNAAIAVLDKISN---PAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIG 403 (465)
Q Consensus 332 i~~~~~~~---~~~~t~--~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~ 403 (465)
+.+.+... .....+ +.++...++..++++.+.. +++.+++.++.+++.+.|.+. .+.+..... ......
T Consensus 261 ~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~--g~~v~~~~~-~~~~~~ 337 (452)
T PTZ00094 261 VKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR--GYDLVTGGT-DNHLVL 337 (452)
T ss_pred cchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC--CcEEecCCC-CCceEe
Confidence 44322110 011111 3466777788888888743 346677778888888777652 222111001 112233
Q ss_pred EEe---cCChHHHHHHHHHCCceEeec----C----CCCEEEEecCCCCc----HHHHHHHHHHHHHHHHH
Q 012368 404 IEF---DVSATPVVDACRDSGLLVLTA----G----KGNVVRLVPPLIIS----EQELDQAVEILCKTLPV 459 (465)
Q Consensus 404 i~~---~~~~~~~~~~l~~~Gv~v~~~----~----~~~~lRi~~~~~~t----~e~i~~~l~~l~~~l~~ 459 (465)
+.+ +.....+...|.++||.+... . .++.+|++++..++ ++|++++++.|.+++..
T Consensus 338 v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 338 VDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred ecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 344 234567777787789999532 1 13679999976665 99999999999998874
No 283
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.75 E-value=2.2e-16 Score=156.37 Aligned_cols=279 Identities=18% Similarity=0.145 Sum_probs=172.0
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+..++++...+|+++|++.. .+.+++++||++|+..++.... .++++||+.+++|++....+....
T Consensus 45 y~ry~~p~~~~Le~~lA~l~-~~~~v~~~sG~~Ai~~~l~all-----------~~Gd~Vl~~~~~y~~~~~~~~~~l-- 110 (366)
T PRK07582 45 YGRASNPTWRALEAALGELE-GAEALVFPSGMAAITAVLRALL-----------RPGDTVVVPADGYYQVRALAREYL-- 110 (366)
T ss_pred eECCCCccHHHHHHHHHHHc-CCCEEEECCHHHHHHHHHHHhc-----------CCCCEEEEeCCCcHhHHHHHHHHH--
Confidence 45677777899999999998 5667778889999998887553 168999999999977654321100
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
......+.+++.++.. +... + ++++|+++..++++|.+.+ +++|.++|+++|+++|+||+|...
T Consensus 111 -------~~~G~~v~~v~~~~~~--~~~~-~-~t~lV~le~p~NPtg~v~d----i~~I~~~a~~~g~~lvVD~t~~~~- 174 (366)
T PRK07582 111 -------APLGVTVREAPTAGMA--EAAL-A-GADLVLAETPSNPGLDVCD----LAALAAAAHAAGALLVVDNTTATP- 174 (366)
T ss_pred -------hcCeEEEEEECCCChH--HHhc-c-CceEEEEECCCCCCCCccC----HHHHHHHHHHcCCEEEEECCCCCc-
Confidence 0011223444444332 1222 3 4566666655445554544 999999999999999999998521
Q ss_pred CCCccccccccCCcccEE--EecccCCC--ccceeeEEeC-HHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHH
Q 012368 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG--GLPIGAALVT-EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFL 368 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~--t~sK~lg~--G~~iG~v~~~-~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~ 368 (465)
.|.. .. ....|++ +++|+++| |+++||++++ +++++.+...........+|+.+..+...|+.+ +...
T Consensus 175 -~~~~-p~---~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~tl--~~R~ 247 (366)
T PRK07582 175 -LGQR-PL---ELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLGTL--GLRF 247 (366)
T ss_pred -cccC-ch---hcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccccH--HHHH
Confidence 1211 11 2234665 57799976 6899999874 677776653222222345677766655555532 2334
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcee------------------eeccceEEEEEecCChHHHHHHHHHCCceEee---c
Q 012368 369 ASVSKKGHYFKETLKQKLARNPHVKD------------------VRGLGLIIGIEFDVSATPVVDACRDSGLLVLT---A 427 (465)
Q Consensus 369 ~~~~~~~~~l~~~l~~~~~~~~~~~~------------------~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~---~ 427 (465)
++..++...+.+.|++ +|.+.. ..+.|.++.++++ +..+..+.+...+++... +
T Consensus 248 ~~~~~na~~la~~L~~----~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~-~~~~~~~~~~~l~~~~~~~s~G 322 (366)
T PRK07582 248 ARQCANALAVAELLAG----HPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA-DAAAAERFVAASRLVVAATSFG 322 (366)
T ss_pred HHHHHHHHHHHHHHHh----CCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC-CHHHHHHHHHhCCcceecccCC
Confidence 5566666666666554 332221 1257889999985 445555555555655431 0
Q ss_pred ------------C---CCCEEEEecCCCCcHHHHHHHHHHHH
Q 012368 428 ------------G---KGNVVRLVPPLIISEQELDQAVEILC 454 (465)
Q Consensus 428 ------------~---~~~~lRi~~~~~~t~e~i~~~l~~l~ 454 (465)
+ .++.+|+++.+...++.|+.+.++|+
T Consensus 323 ~~~sl~~~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 323 GVHTSADRRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred CccchhhhHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 1 13579999988766665555555543
No 284
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.75 E-value=1.7e-16 Score=157.21 Aligned_cols=284 Identities=14% Similarity=0.098 Sum_probs=176.6
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+....++....|+++|+++.+.+.+++++||++|+..++..+.. ++|+||+.++.|++.........
T Consensus 44 Y~r~gnPt~~~lE~~lA~l~g~~~~~~~~sG~~Ai~~al~all~-----------~GD~Vl~~~~~y~~t~~~~~~~~-- 110 (377)
T TIGR01324 44 YGRRGTLTHFALQDAMCELEGGAGCYLYPSGLAAVTNSILAFVK-----------AGDHVLMVDSAYEPTRYFCDIVL-- 110 (377)
T ss_pred ccCCCCccHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhcC-----------CCCEEEEcCCCcHHHHHHHHHHH--
Confidence 34566777889999999999988999999999999999886642 68999999999987543211000
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
......+.+++..+.+++++++++ ++++|++|...+..|...+ +++|.++|+++|+++|+|++|. .|
T Consensus 111 -------~~~gi~v~~~d~~~~e~l~~~i~~-~tklV~lesp~Np~g~~~d----l~~I~~la~~~g~~livD~t~a-~g 177 (377)
T TIGR01324 111 -------KRMGVDITYYDPLIGEDIATLIQP-NTKVLFLEAPSSITFEIQD----IPAIAKAARNPGIVIMIDNTWA-AG 177 (377)
T ss_pred -------HhcCcEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCc-cc
Confidence 001112333444455889999875 4678888876666665544 9999999999999999999996 32
Q ss_pred CCCccccccccCCcccEEE--ecccCCC--ccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHH
Q 012368 294 RTGYLWAHEHYGIFPDIMT--LAKPLAG--GLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLA 369 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~t--~sK~lg~--G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~ 369 (465)
....+ .....|+++ ++|.++| +.-.|+++++++.++.+...........+|..+...+..++.+ .-.++
T Consensus 178 ~~~~p-----l~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~tl--~~R~~ 250 (377)
T TIGR01324 178 LLFKP-----LEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGLRTL--GVRLK 250 (377)
T ss_pred cccCc-----cccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhhH--HHHHH
Confidence 22221 123457765 5799986 3778999998887766542211222334565555555555433 12244
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCce------------------eeeccceEEEEEecC-C---hHHHHHHHHHCCce----
Q 012368 370 SVSKKGHYFKETLKQKLARNPHVK------------------DVRGLGLIIGIEFDV-S---ATPVVDACRDSGLL---- 423 (465)
Q Consensus 370 ~~~~~~~~l~~~l~~~~~~~~~~~------------------~~~~~g~~~~i~~~~-~---~~~~~~~l~~~Gv~---- 423 (465)
+..++...+.+.|++ +|.+. ...+.|.++.+++.. . ..+|.+.|.--++-
T Consensus 251 ~~~~~a~~la~~L~~----~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~~~~~slG 326 (377)
T TIGR01324 251 QHQESSLAIAKWLSE----QPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLFGLGYSWG 326 (377)
T ss_pred HHHHHHHHHHHHHHh----CCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEeccCC
Confidence 444555455554443 33211 123668899999842 2 23455554432221
Q ss_pred -----Ee-ec------------CCCCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 424 -----VL-TA------------GKGNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 424 -----v~-~~------------~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
+. +. -.++.+||++.+. +.+++++-|+++|+
T Consensus 327 ~~~sl~~~~~~~~~~~~~~~~~~~~~liR~svGlE----~~~dl~~dl~~al~ 375 (377)
T TIGR01324 327 GYESLALCNQPELGHRPNIKRNLEGPLIRVHIGLE----NVDDLKADLKAGFE 375 (377)
T ss_pred CccceeecCCCCCCHHHHHhccCCCCEEEEEeCCC----CHHHHHHHHHHHHh
Confidence 11 00 0135689987765 45556666666664
No 285
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.75 E-value=6.9e-16 Score=153.24 Aligned_cols=306 Identities=13% Similarity=0.147 Sum_probs=187.3
Q ss_pred HHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEE
Q 012368 117 ADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSF 196 (465)
Q Consensus 117 p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~ 196 (465)
++..+++.+.+..... ....+...++++++++.++.+++++++||++|+.++++++. . .++++||+.
T Consensus 11 ~~e~~a~~~~~~~~~~---~~~g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~--~--------~pGd~Viv~ 77 (376)
T TIGR02379 11 GQELEYIAEAISEGKL---SGDGPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLD--I--------QPGDEVIMP 77 (376)
T ss_pred HHHHHHHHHHHHcCCc---cCCcHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcC--C--------CCcCEEEEC
Confidence 4567888887765322 11245578999999999999999999999999998887541 1 268999999
Q ss_pred cCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHH
Q 012368 197 TNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDAC 276 (465)
Q Consensus 197 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~ 276 (465)
+++|.+....+...+..+.+. +..++. + .-|++++++++++ ++++|+ |++++ |...+ +++|.++|
T Consensus 78 ~~t~~~~~~~~~~~G~~~v~v----d~d~~~-~--~~d~~~le~~i~~-~tk~Ii--p~~~~-G~~~d----~~~I~~la 142 (376)
T TIGR02379 78 SYTFVSTANAFVLRGAKIVFV----DIRPDT-M--NIDETLIESAITH-RTKAIV--PVHYA-GVACD----MDTIMALA 142 (376)
T ss_pred CCCcHHHHHHHHHcCCEEEEE----ecCCCc-C--CCCHHHHHHhcCc-CceEEE--EeCCC-CCccC----HHHHHHHH
Confidence 999987654444333222211 111111 0 0278999999975 456665 55544 44443 88999999
Q ss_pred HHhCCEEEEeccccCCC-CCCccccccccCCcccEEEec----ccCCCccceeeEEeC-HHHHhhccCCC-C--------
Q 012368 277 DDAGALLVFDEVQCGLG-RTGYLWAHEHYGIFPDIMTLA----KPLAGGLPIGAALVT-EKVASAINYGD-H-------- 341 (465)
Q Consensus 277 ~~~g~llI~DEv~~g~g-r~g~~~~~~~~~~~pdi~t~s----K~lg~G~~iG~v~~~-~~i~~~~~~~~-~-------- 341 (465)
++||++||.|++|+-.. ..|. ..+..-|+.+|| |.++.|.+.|+++.+ +++.+.++... +
T Consensus 143 ~~~~i~vIeDaa~~~g~~~~~~-----~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~ 217 (376)
T TIGR02379 143 NKHQLFVIEDAAQGVMSTYKGR-----ALGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQFF 217 (376)
T ss_pred HHCCCEEEEECccccCCccCCc-----ccCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCcccc
Confidence 99999999999987321 1121 223334788888 999888788988775 67777664321 1
Q ss_pred ------------cCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH----cCCCce-eeeccceEEEE
Q 012368 342 ------------GSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLA----RNPHVK-DVRGLGLIIGI 404 (465)
Q Consensus 342 ------------~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~~~-~~~~~g~~~~i 404 (465)
+..+..+.+..+.+++.|+.+ ++..++-++..++..+.|..+.. ..+... .....-.++.+
T Consensus 218 ~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l--~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i 295 (376)
T TIGR02379 218 RGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQA--DRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYI 295 (376)
T ss_pred ccCCCcceeeeecccCCccHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEE
Confidence 112223445555555556543 33444455555555555544321 111110 11101112344
Q ss_pred EecC--ChHHHHHHHHHCCceEeec----CC---------------------CCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 405 EFDV--SATPVVDACRDSGLLVLTA----GK---------------------GNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 405 ~~~~--~~~~~~~~l~~~Gv~v~~~----~~---------------------~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
.++. +..++.+.|.++||.+... .. .+.+.+=+....|++|++..++.|++++
T Consensus 296 ~~~~~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 296 KLKDEDDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred EECCcCCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 4432 4678999999999987521 00 1123332234579999999999998764
No 286
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.74 E-value=3.4e-16 Score=157.73 Aligned_cols=166 Identities=20% Similarity=0.161 Sum_probs=122.5
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+++++++...+|+++|+++.+.+.+++++||++|+..++..+.. ++++||+.++.|++.........
T Consensus 51 ysr~~~p~~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~~l~~-----------~Gd~Vl~~~~~y~~t~~~~~~~~-- 117 (418)
T TIGR01326 51 YSRLMNPTTDVLEQRIAALEGGVAALAVASGQAAITYAILNLAQ-----------AGDNIVSSSYLYGGTYNLFKHTL-- 117 (418)
T ss_pred eECCCChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhC-----------CCCEEEEECCCcHHHHHHHHHHH--
Confidence 45677788899999999999988899999999999999986652 68899999999977532211100
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
......+.+++.+|++++++++++ ++++|++|..++..|.+.+ +++|+++|++||+++|+||+|.. +
T Consensus 118 -------~~~G~~v~~v~~~d~~~l~~~l~~-~t~~V~le~p~NPtg~v~d----l~~I~~la~~~~i~livD~t~~~-~ 184 (418)
T TIGR01326 118 -------KRLGIEVRFVDPDDPEEFEKAIDE-NTKAVFAETIGNPAINVPD----IEAIAEVAHAHGVPLIVDNTFAT-P 184 (418)
T ss_pred -------HHcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCch-h
Confidence 011123445666789999999975 4677777776666666654 89999999999999999999852 1
Q ss_pred CCCccccccccCCcccEE--EecccCCC-ccceeeEEeCH
Q 012368 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPIGAALVTE 330 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~--t~sK~lg~-G~~iG~v~~~~ 330 (465)
.. .......+|++ +++|.+++ |+++|++++++
T Consensus 185 ~~-----~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 185 YL-----CRPIDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred hc-----CCchhcCCeEEEECccccccCCccceEEEEEec
Confidence 11 11122345766 67899997 89999998864
No 287
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.74 E-value=2.2e-15 Score=145.72 Aligned_cols=311 Identities=21% Similarity=0.202 Sum_probs=205.3
Q ss_pred CCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC---CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCc
Q 012368 115 GDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF---ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPAT 191 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~---~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~ 191 (465)
-+|+|++|+.+.+-. |. ..-......++.+.|...++ .+-++++.||+-|++.++..+.. +++
T Consensus 16 v~~~V~~am~~~~~~--h~-s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~-----------pgd 81 (383)
T COG0075 16 VPPRVLLAMARPMVG--HR-SPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVE-----------PGD 81 (383)
T ss_pred CCHHHHHHhcCCCCC--CC-CHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccC-----------CCC
Confidence 457777777664321 11 11112336677777777777 25677889999999999986662 789
Q ss_pred eEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceE--eeC---CCHHHHHhhcC-CCCeEEEEEcccCCCCCcccCC
Q 012368 192 EFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNF--VEY---GNIEATRKLIQ-PGKTAAVFVEPIQGEGGIYSAT 265 (465)
Q Consensus 192 ~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~d~~~le~~l~-~~~~a~vi~ep~~~~~G~~~~~ 265 (465)
+|++...+..|.-..-+.-. +...+.. .++ -|+++++++|+ ..++.+|.+-.+-.++|++.|
T Consensus 82 kVLv~~nG~FG~R~~~ia~~-----------~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnp- 149 (383)
T COG0075 82 KVLVVVNGKFGERFAEIAER-----------YGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNP- 149 (383)
T ss_pred eEEEEeCChHHHHHHHHHHH-----------hCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCc-
Confidence 99999998888764332211 0011111 111 28999999998 446778888777778888887
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEe--cccCCCccceeeEEeCHHHHhhccCCC---
Q 012368 266 KEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTL--AKPLAGGLPIGAALVTEKVASAINYGD--- 340 (465)
Q Consensus 266 ~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~--sK~lg~G~~iG~v~~~~~i~~~~~~~~--- 340 (465)
+++|.++|++||+++|+|-|-+ +| |..+-.+.|++ |+++- -|++++.-.+|++..+++..+.+....
T Consensus 150 ---l~~I~~~~k~~g~l~iVDaVsS-~G--g~~~~vd~wgi--Dv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~ 221 (383)
T COG0075 150 ---LKEIAKAAKEHGALLIVDAVSS-LG--GEPLKVDEWGI--DVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPS 221 (383)
T ss_pred ---HHHHHHHHHHcCCEEEEEeccc-CC--CcccchhhcCc--cEEEecCchhccCCCccceeEECHHHHHHHhcCCCCc
Confidence 9999999999999999999876 54 44556666775 55543 399997556788888988877765321
Q ss_pred ---------------CcCCCCChHHHHHHHHHHHHHhcCch---HHHHHHHHHHHHHHHHHHHHHcCCCceee-eccceE
Q 012368 341 ---------------HGSTFAGSPLVCNAAIAVLDKISNPA---FLASVSKKGHYFKETLKQKLARNPHVKDV-RGLGLI 401 (465)
Q Consensus 341 ---------------~~~t~~~~~~~~~aa~a~L~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~ 401 (465)
....|..+.-...|..++|+.+.++. .+++-+++.+.+++.++++ .+..+... .....+
T Consensus 222 ~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al--Gl~~~~~~~~~s~tv 299 (383)
T COG0075 222 FYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL--GLELFADPERRSPTV 299 (383)
T ss_pred eeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--CCccccCcccCCCce
Confidence 12233444455667778898886654 4455555566666666554 22222211 222344
Q ss_pred EEEEec--CChHHHHHHHHHC-CceEeecCC---CCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 402 IGIEFD--VSATPVVDACRDS-GLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 402 ~~i~~~--~~~~~~~~~l~~~-Gv~v~~~~~---~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
..+..+ .+..++...++++ |+.+.++.. +.++||...-..+.+++..++.+|+.+|.++.
T Consensus 300 ta~~~P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 300 TAIKVPEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELG 365 (383)
T ss_pred EEEECCCCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcC
Confidence 445543 2344444466655 888776532 57899987778899999999999999998763
No 288
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.74 E-value=1.4e-15 Score=150.87 Aligned_cols=237 Identities=15% Similarity=0.108 Sum_probs=151.7
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+....++...+|+++|+++.+.+.+++++||++|+..++..... ++|+||+.++.|.+........
T Consensus 55 Y~r~~npt~~~Le~~iA~le~~~~~~~~~sG~~Ai~~~l~all~-----------~GD~Vvv~~~~Y~~t~~l~~~~--- 120 (394)
T PRK09028 55 YGRRGTPTHFAFQAAIVELEGGAGTALYPSGAAAISNALLSFLK-----------AGDHLLMVDSCYEPTRDLCDKI--- 120 (394)
T ss_pred ecCCCCchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC-----------CCCEEEEECCCcHHHHHHHHHh---
Confidence 34445566779999999988877899999999999998876542 6899999999996665321110
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
.......+.+++..+.+.+++++++ ++++|++|...+..|.+.+ +++|.++|+++|+++|+|++|...
T Consensus 121 ------l~~~Gi~v~~v~~~~~e~l~~~l~~-~TklV~lespsNPtg~v~d----l~~I~~la~~~g~~lvvD~t~a~p- 188 (394)
T PRK09028 121 ------LKGFGIETTYYDPMIGEGIRELIRP-NTKVLFLESPGSITMEVQD----VPTLSRIAHEHDIVVMLDNTWASP- 188 (394)
T ss_pred ------hhhcceEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCcccc-
Confidence 0011123344555577889999975 5678888876665555443 999999999999999999998631
Q ss_pred CCCccccccccCCcccEEE--ecccCCC-c-cceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHHH
Q 012368 294 RTGYLWAHEHYGIFPDIMT--LAKPLAG-G-LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLA 369 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~t--~sK~lg~-G-~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~ 369 (465)
. .+.-.....|+++ .+|+++| | .-.|+++.++++.+.+...........+|..+....-.|+.+ .-.++
T Consensus 189 ---~--~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL--~lR~~ 261 (394)
T PRK09028 189 ---I--NSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQCTSPDDVYLAMRGLRTL--GVRLA 261 (394)
T ss_pred ---c--cCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcH--HHHHH
Confidence 1 1222234467764 5699987 4 778888777776665542111112235666665554444422 12234
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCce------------------eeeccceEEEEEec
Q 012368 370 SVSKKGHYFKETLKQKLARNPHVK------------------DVRGLGLIIGIEFD 407 (465)
Q Consensus 370 ~~~~~~~~l~~~l~~~~~~~~~~~------------------~~~~~g~~~~i~~~ 407 (465)
+..++...+.+.| +++|.+. ...+.|.++.|+++
T Consensus 262 ~~~~na~~la~~L----~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~ 313 (394)
T PRK09028 262 QHEKNALKVANWL----ATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLK 313 (394)
T ss_pred HHHHHHHHHHHHH----hcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEEC
Confidence 4444444444444 4444222 12466889999984
No 289
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.73 E-value=1.6e-15 Score=151.35 Aligned_cols=237 Identities=17% Similarity=0.207 Sum_probs=150.1
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+..++++...+|+++|+++.+.+..+.++||++|+..+++.+.. ++++||+.++.|.+.........
T Consensus 55 Y~r~~~p~~~~Le~~lA~~~g~~~~i~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~y~~t~~~~~~~~-- 121 (388)
T PRK07811 55 YARTGNPTRTALEEQLAALEGGAYGRAFSSGMAATDCLLRAVLR-----------PGDHIVIPNDAYGGTFRLIDKVF-- 121 (388)
T ss_pred ccCCCCccHHHHHHHHHHHhCCCceEEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchHHHHHHHHhC--
Confidence 34566677889999999999866677778999999999987652 68999999999965432211110
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
......+.+++..|++++++++++ ++++|+++..++..|...+ +++|.++|+++|+++|+||+|...
T Consensus 122 -------~~~gi~~~~~d~~d~e~l~~~i~~-~tklV~ie~p~NPtg~~~d----l~~I~~la~~~gi~lIvD~a~a~~- 188 (388)
T PRK07811 122 -------TRWGVEYTPVDLSDLDAVRAAITP-RTKLIWVETPTNPLLSITD----IAALAELAHDAGAKVVVDNTFASP- 188 (388)
T ss_pred -------cCCCeEEEEeCCCCHHHHHHhcCc-CCeEEEEECCCCCcceecC----HHHHHHHHHHcCCEEEEECCCCcc-
Confidence 011123345555689999999976 4567766554444455444 999999999999999999998643
Q ss_pred CCCccccccccCCcccEE--EecccCCC-c-cceeeEEeC-HHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHH
Q 012368 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-G-LPIGAALVT-EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFL 368 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~--t~sK~lg~-G-~~iG~v~~~-~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~ 368 (465)
..+.. .....|++ +++|.++| | .+.|+++++ +++.+.+...........+|+.+..++..|+.+ +...
T Consensus 189 ~~~~p-----~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~tl--~~R~ 261 (388)
T PRK07811 189 YLQQP-----LALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLKTL--AVRM 261 (388)
T ss_pred ccCCc-----hhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCcH--HHHH
Confidence 22221 12234665 56799986 4 678988875 666665542222222334566554444444422 2334
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCce------------------eeeccceEEEEEec
Q 012368 369 ASVSKKGHYFKETLKQKLARNPHVK------------------DVRGLGLIIGIEFD 407 (465)
Q Consensus 369 ~~~~~~~~~l~~~l~~~~~~~~~~~------------------~~~~~g~~~~i~~~ 407 (465)
++..++...+.+.|+ .+|.+. ...|.|.++.++++
T Consensus 262 ~~~~~na~~la~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 314 (388)
T PRK07811 262 DRHSENAEAVAEFLA----GHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLA 314 (388)
T ss_pred HHHHHHHHHHHHHHH----hCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeC
Confidence 444555555555544 444221 12467889999994
No 290
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.73 E-value=8.4e-16 Score=148.00 Aligned_cols=328 Identities=16% Similarity=0.180 Sum_probs=191.2
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhccccc-CC-CCCHH---HHHHHHHHHhhcC--CCeEEecCCHHHHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVS-NM-YYSIP---QIELAKRLVACSF--ADRVFFSNTGTEANEA 170 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~-~~-~~~~~---~~~la~~l~~~~~--~~~v~~~~sG~eA~~~ 170 (465)
.-|+|..+ .|-.+|.|.+|+.+.+......+ .. +.... .++.++.+++..+ ..+|+||+++||++.+
T Consensus 44 ~vyld~~a------t~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nl 117 (428)
T KOG1549|consen 44 PVYLDNQA------TGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNL 117 (428)
T ss_pred cEEEecCc------CCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHH
Confidence 45788665 45588999999999877642211 11 22222 5566777888887 4569999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCC-----CHHHHHhhcCCC
Q 012368 171 AIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG-----NIEATRKLIQPG 245 (465)
Q Consensus 171 al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~ 245 (465)
+++..-.+.+. + .+..||.+.-.|.........+-. .. ..+.++|.+ |++.+++.|++
T Consensus 118 vl~~v~~~~~~-~-----~~k~iitl~~eH~~v~~s~~~l~~-~g---------~~Vt~lpv~~~~~~d~~~~~~~i~~- 180 (428)
T KOG1549|consen 118 VLKGVARFFGD-K-----TKKHIITLQTEHPCVLDSCRALQE-EG---------LEVTYLPVEDSGLVDISKLREAIRS- 180 (428)
T ss_pred HHHHhhccccc-c-----ccceEEEecccCcchhHHHHHHHh-cC---------eEEEEeccCccccccHHHHHHhcCC-
Confidence 99865543321 0 122666666555444333332211 11 122333332 78999999986
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccCCC-ccc
Q 012368 246 KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAG-GLP 322 (465)
Q Consensus 246 ~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~-G~~ 322 (465)
++.+|.++.++++.|+..| +++|.++|+++++.+++|-+|. .|.. ..+.-++.+|+.+++ |++|. |
T Consensus 181 ~T~lv~I~~Vnn~~gv~~P----v~EI~~icr~~~v~v~~DaAQa-vG~i----~vDV~eln~D~~s~s~HK~ygp~~-- 249 (428)
T KOG1549|consen 181 KTRLVSIMHVNNEIGVLQP----VKEIVKICREEGVQVHVDAAQA-VGKI----PVDVQELNADFLSISAHKIYGPPG-- 249 (428)
T ss_pred CceEEEEEecccCcccccc----HHHHHHHhCcCCcEEEeehhhh-cCCc----cccHHHcCchheeeecccccCCCc--
Confidence 7899999999999999998 9999999999999999999986 4322 355556778988876 98875 4
Q ss_pred eeeEEeCHH---HH--hhccCCC-----CcCCCCChHHHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHHHHc--
Q 012368 323 IGAALVTEK---VA--SAINYGD-----HGSTFAGSPLVCNAAIAVLDKISN--PAFLASVSKKGHYFKETLKQKLAR-- 388 (465)
Q Consensus 323 iG~v~~~~~---i~--~~~~~~~-----~~~t~~~~~~~~~aa~a~L~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~-- 388 (465)
+|++++++. +. -.+..+. ..+|- +.+.+...-++.+.... ........+....+...+......
T Consensus 250 iGaLYvr~~~~~~~~~p~~~GGgq~r~~rsGT~--~~~~~~~~gsA~e~~~~~~~~~~~~~~~~~~~ll~~i~~~~~~~~ 327 (428)
T KOG1549|consen 250 IGALYVRRKRPRLRVEPPLSGGGQERGLRSGTV--ATPLAVGLGSAAEFVNKEMAYDEAIIKRLSEKLLMGIGQSLPEVT 327 (428)
T ss_pred ceEEEEccCCCcccccCcccCCccccccccCCc--CchhhhhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHhhhCchhh
Confidence 999999861 11 1111111 11221 22233333334443322 122223333444443333221110
Q ss_pred -CCCceeeeccceEEEEEe--cC------Ch-------------HHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHH
Q 012368 389 -NPHVKDVRGLGLIIGIEF--DV------SA-------------TPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQEL 446 (465)
Q Consensus 389 -~~~~~~~~~~g~~~~i~~--~~------~~-------------~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i 446 (465)
.+...........+.+.. +. +. .+....|+..|+-.... ...+||++....+++|+
T Consensus 328 ~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~--~~~iRis~G~y~t~~di 405 (428)
T KOG1549|consen 328 LNGSGKSRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLA--HSSIRISIGRYTTEEDI 405 (428)
T ss_pred ccCCcccccccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhh--cceeEEeeeeeCcHHHH
Confidence 010000011112222221 00 00 01122344455532222 25799999999999999
Q ss_pred HHHHHHHHHHHHHhhhc
Q 012368 447 DQAVEILCKTLPVLDSN 463 (465)
Q Consensus 447 ~~~l~~l~~~l~~~~~~ 463 (465)
+.+++.+.+.+..+..+
T Consensus 406 ~~~~~~i~~~v~~~~~~ 422 (428)
T KOG1549|consen 406 DYLVDAIKKLVSLLREM 422 (428)
T ss_pred HHHHHHHHHHHHhcccc
Confidence 99999999988776543
No 291
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.73 E-value=1.4e-15 Score=151.44 Aligned_cols=236 Identities=16% Similarity=0.092 Sum_probs=150.6
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+..+.++...+|++++++..+.+.+++++||++|+..++..... +++.|++..+.|++.......+.
T Consensus 47 y~r~~np~~~~lE~~lA~l~g~~~~l~~~sG~~Ai~~~l~~ll~-----------~GD~Vlv~~~~y~~~~~~~~~~~-- 113 (385)
T PRK08574 47 YSREENPTLRPLEEALAKLEGGVDALAFNSGMAAISTLFFSLLK-----------AGDRVVLPMEAYGTTLRLLKSLE-- 113 (385)
T ss_pred EECCCCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhHHHHHHHhh--
Confidence 45566777889999999999988889999999999998886542 68999999999976543221110
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
.....+.+++ .|++++++++++.++++|+++..+++.|.+.+ +++|.++|+++|+++|+|+++.. +
T Consensus 114 --------~~g~~v~~~~-~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d----l~~I~~la~~~gi~livD~t~a~-~ 179 (385)
T PRK08574 114 --------KFGVKVVLAY-PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID----VPEVAKAAKELGAILVVDNTFAT-P 179 (385)
T ss_pred --------ccCcEEEEEC-CCHHHHHHhcCccCceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCCc-c
Confidence 0011122222 37899999997535777778776666676655 88999999999999999999852 1
Q ss_pred CCCccccccccCCcccEE--EecccCCC-ccc-eeeEEe-CHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHH
Q 012368 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-GLP-IGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFL 368 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~--t~sK~lg~-G~~-iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~ 368 (465)
..... . ..| .|++ +++|+++| |-. .|++++ ++++.+.+...........+|+.++.++..|+.+ +...
T Consensus 180 ~~~~~--l-~~G--aDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~tL--~~R~ 252 (385)
T PRK08574 180 LLYRP--L-RHG--ADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLKTL--EVRF 252 (385)
T ss_pred ccCCh--h-hhC--CcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcH--HHHH
Confidence 11111 1 123 3555 57799986 533 464554 6777766543222123345676666666555533 2233
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcee------------------e--eccceEEEEEec
Q 012368 369 ASVSKKGHYFKETLKQKLARNPHVKD------------------V--RGLGLIIGIEFD 407 (465)
Q Consensus 369 ~~~~~~~~~l~~~l~~~~~~~~~~~~------------------~--~~~g~~~~i~~~ 407 (465)
++..++..++.+.|+ .+|.+.. . .+.|.++.|++.
T Consensus 253 ~~~~~na~~la~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~ 307 (385)
T PRK08574 253 ERQCRNAMAIAEFLS----EHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVK 307 (385)
T ss_pred HHHHHHHHHHHHHHH----cCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeC
Confidence 444445555544443 3442211 1 257889999984
No 292
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.73 E-value=7.3e-16 Score=152.64 Aligned_cols=289 Identities=13% Similarity=0.096 Sum_probs=166.0
Q ss_pred CCCCHHHHHHHHHHHhhcccccCC-CC------CHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHHHHhhhcC
Q 012368 113 GHGDADWIKAVVDQANVLTHVSNM-YY------SIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSN 183 (465)
Q Consensus 113 Gh~~p~v~~a~~~~~~~~~~~~~~-~~------~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~~~t~~~~ 183 (465)
|..++.|++++.+.+......+.. .. ....++++++|+++++ .+.|+|++|+++|+..+++.+.....
T Consensus 8 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~--- 84 (353)
T TIGR03235 8 TPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGE--- 84 (353)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcc---
Confidence 457899999999887542111111 11 1225678889999887 56899999999999999886653210
Q ss_pred CCCCCCC-ceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcc
Q 012368 184 PDSKEPA-TEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIY 262 (465)
Q Consensus 184 ~~~~~~~-~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~ 262 (465)
.++ +.|++.. ..|....................+...+.. .|++++++++++ ++++|+++.+++..|.+
T Consensus 85 ----~~g~~~vi~~~-~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~----~d~~~l~~~l~~-~~~lv~~~~~~n~tG~~ 154 (353)
T TIGR03235 85 ----QKGKKHIITSA-IEHPAVLEPIRALERNGFTVTYLPVDESGR----IDVDELADAIRP-DTLLVSIMHVNNETGSI 154 (353)
T ss_pred ----cCCCCeeeEcc-cccHHHHHHHHHHHhcCCEEEEEccCCCCc----CCHHHHHHhCCC-CCEEEEEEcccCCceec
Confidence 023 4555544 444433222111000000000011111111 278999999975 46777777777777877
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccCCCccceeeEEeCHHHHhh--ccC
Q 012368 263 SATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASA--INY 338 (465)
Q Consensus 263 ~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~--~~~ 338 (465)
.+ +++|.++|+++|+++|+|+++. +|.. . .+.....+|++++| |+++ ...+|+++++++.... +.+
T Consensus 155 ~~----~~~I~~l~~~~~~~~ivD~a~~-~g~~--~--~~~~~~~~D~~~~s~~K~~g-p~g~g~l~~~~~~~~~~~~~~ 224 (353)
T TIGR03235 155 QP----IREIAEVLEAHEAFFHVDAAQV-VGKI--T--VDLSADRIDLISCSGHKIYG-PKGIGALVIRKRGKPKAPLKP 224 (353)
T ss_pred cC----HHHHHHHHHHcCCEEEEEchhh-cCCc--c--ccccccCCCEEEeehhhcCC-CCceEEEEEccCcccccccCc
Confidence 66 8999999999999999999986 4322 1 22222347888776 9753 2347899888774322 222
Q ss_pred CCC-------cCCCCChHHHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHHHHcCCCceee-eccceEEEEEec-
Q 012368 339 GDH-------GSTFAGSPLVCNAAIAVLDKISN--PAFLASVSKKGHYFKETLKQKLARNPHVKDV-RGLGLIIGIEFD- 407 (465)
Q Consensus 339 ~~~-------~~t~~~~~~~~~aa~a~L~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~i~~~- 407 (465)
... ......++....+..++++.+.+ +...++++++.+++++.|++. .+...... .....+..+.++
T Consensus 225 ~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~--g~~~~~~~~~~~~~i~~~~~~~ 302 (353)
T TIGR03235 225 IMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTL--GVKLNGDPAETIPHILNFSIDG 302 (353)
T ss_pred eeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccC--CeEEeCCcccccCCEEEEEeCC
Confidence 111 01223455666666677776532 344555666666666555431 11111111 112334555543
Q ss_pred CChHHHHHHHHHCCceEeec
Q 012368 408 VSATPVVDACRDSGLLVLTA 427 (465)
Q Consensus 408 ~~~~~~~~~l~~~Gv~v~~~ 427 (465)
.+..++.+.|. +||.+.++
T Consensus 303 ~~~~~v~~~L~-~~i~v~~g 321 (353)
T TIGR03235 303 VNSEALIVNLR-ADAAVSTG 321 (353)
T ss_pred cCHHHHHHHHh-CCeEEEch
Confidence 45667777875 58888765
No 293
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.72 E-value=4.7e-16 Score=153.54 Aligned_cols=235 Identities=15% Similarity=0.116 Sum_probs=149.7
Q ss_pred ccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccC
Q 012368 133 VSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (465)
Q Consensus 133 ~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (465)
.+.+++++...+|+++|+++.+.+.++.++||++|+.+++.++. ++|+||+..+.|++.........
T Consensus 47 ~Y~R~~~p~~~~le~~lA~leg~~~~v~~~sG~aAi~~~l~~l~------------~GD~VI~~~~~yg~~~~~~~~~~- 113 (364)
T PRK07269 47 DYTRTKNPTRAKLEETLAAIESADYALATSSGMSAIVLAFSVFP------------VGSKVVAVRDLYGGSFRWFNQQE- 113 (364)
T ss_pred ceeCCCCccHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhC------------CCCEEEEecCCcCchHHHHHHHH-
Confidence 34667777789999999999999999999999999999885322 68999999998865442111100
Q ss_pred CCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 213 KEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
+. .++...-..|+++++++++++ +++|++|..++..|...+ +++|+++|+++|+++|+||++...
T Consensus 114 ---------~~-~~~~~~~~~d~~~l~~~i~~~-TklV~lesP~NPtg~~~d----i~~I~~la~~~gi~vvvD~t~~~~ 178 (364)
T PRK07269 114 ---------KE-GRFHFTYANTEEELIAAIEED-TDIVYIETPTNPLMVEFD----IEKVAKLAHAKGAKVIVDNTFYSP 178 (364)
T ss_pred ---------hc-CcEEEEecCCHHHHHHhcCcC-ceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCccc
Confidence 00 011111123899999999754 556655554444455444 999999999999999999996421
Q ss_pred CCCCccccccccCCcccEEEe--cccCCC-c-cceeeEEe-CHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchH
Q 012368 293 GRTGYLWAHEHYGIFPDIMTL--AKPLAG-G-LPIGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAF 367 (465)
Q Consensus 293 gr~g~~~~~~~~~~~pdi~t~--sK~lg~-G-~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~ 367 (465)
.. ....+...|++++ +|.++| | .-.|++++ ++++.+.+...........+|+.++.++..|+.+ +..
T Consensus 179 -~~-----~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~tL--~~r 250 (364)
T PRK07269 179 -IY-----QRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLKTL--SLR 250 (364)
T ss_pred -cc-----CCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCcH--HHH
Confidence 11 1222345677765 599986 4 44577777 4667666642111112345777777666666532 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCce--eeeccceEEEEEec
Q 012368 368 LASVSKKGHYFKETLKQKLARNPHVK--DVRGLGLIIGIEFD 407 (465)
Q Consensus 368 ~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~g~~~~i~~~ 407 (465)
+++.+++...+ .+.++.+|.+. ..++.|.++.|++.
T Consensus 251 ~~~~~~na~~~----a~~L~~~p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 251 MERSTANAQEV----VAFLKKSPAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred HHHHHHHHHHH----HHHHHhCCCccEEeCCCcCcEEEEEEC
Confidence 33444444444 44455667433 23678999999884
No 294
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=1.7e-15 Score=152.39 Aligned_cols=166 Identities=23% Similarity=0.243 Sum_probs=119.5
Q ss_pred ccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccC
Q 012368 133 VSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (465)
Q Consensus 133 ~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (465)
.+...+++...+|+++|++..+.+..++++||++|+..+++.+.. ++++||+.++.|++........
T Consensus 51 ~y~r~~~pt~~~Le~~lA~l~g~~~~l~~ssG~~Ai~~al~al~~-----------~Gd~Vl~~~~~Y~~t~~~~~~~-- 117 (425)
T PRK06084 51 IYTRIMNPTNDVLEQRVAALEGGVGALAVASGMAAITYAIQTIAE-----------AGDNIVSVAKLYGGTYNLLAHT-- 117 (425)
T ss_pred cccCCCCchHHHHHHHHHHHhCCCceeEehhHHHHHHHHHHHHhC-----------CCCEEEEeCCCcchHHHHHHHh--
Confidence 345566777889999999999877788999999999999987652 6889999999998644322111
Q ss_pred CCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 213 KEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
.......+.+++..|++++++++++ ++++|++++.++..|.+.+ +++|.++|++||+++|+|+++..
T Consensus 118 -------l~~~gi~v~~~d~~d~e~le~ai~~-~tklV~lesp~NPtG~v~d----l~~I~~la~~~~i~vVvD~a~a~- 184 (425)
T PRK06084 118 -------LPRIGIETRFAAHDDIAALEALIDE-RTKAVFCESIGNPAGNIID----IQALADAAHRHGVPLIVDNTVAT- 184 (425)
T ss_pred -------cccceeEEEEECCCCHHHHHHHhcc-CCcEEEEeCCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcc-
Confidence 0011123445666799999999975 4677777776666676655 89999999999999999999862
Q ss_pred CCCCccccccccCCcccEE--EecccCCC-ccceeeEEeC
Q 012368 293 GRTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPIGAALVT 329 (465)
Q Consensus 293 gr~g~~~~~~~~~~~pdi~--t~sK~lg~-G~~iG~v~~~ 329 (465)
+... .......|++ +++|.++| |.++|.+++.
T Consensus 185 ~~~~-----~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 185 PVLC-----RPFEHGADIVVHSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred cccC-----ChhhcCCCEEEECchhcccccccceeEEEEe
Confidence 1211 1122346666 56799997 6777766653
No 295
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.71 E-value=1.4e-15 Score=151.94 Aligned_cols=287 Identities=16% Similarity=0.131 Sum_probs=171.1
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+....++...+++++|+++.+.+..++++||+.|+..++..+. ++++||+.++.|++.........
T Consensus 48 y~r~~~p~~~~le~~lA~l~g~~~~v~~~sG~~ai~~~l~~l~------------~Gd~Vlv~~~~y~~~~~~~~~~~-- 113 (390)
T PRK08064 48 YSRSGNPTREALEDIIAELEGGTKGFAFASGMAAISTAFLLLS------------KGDHVLISEDVYGGTYRMITEVL-- 113 (390)
T ss_pred ccCCCChhHHHHHHHHHHHhCCCCeEEECCHHHHHHHHHHHhC------------CCCEEEEccCccchHHHHHHHHH--
Confidence 3445567788999999999986566777899999988875222 58899999999976543211110
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
......+.+++..|++++++++++ ++++|+++..++..|.+.+ +++|.++|+++|+++|+|++|..+.
T Consensus 114 -------~~~G~~v~~v~~~d~~~l~~~l~~-~tklV~l~~p~NptG~~~d----l~~I~~la~~~g~~vvvD~a~~~~~ 181 (390)
T PRK08064 114 -------SRFGIEHTFVDMTNLEEVAQNIKP-NTKLFYVETPSNPLLKVTD----IRGVVKLAKAIGCLTFVDNTFLTPL 181 (390)
T ss_pred -------HHcCCEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCcEecc----HHHHHHHHHHcCCEEEEECCCCccc
Confidence 011233456666789999999975 4566666655555566554 8999999999999999999986431
Q ss_pred CCCccccccccCCcccEE--EecccCCC--ccceeeEEeC-HHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHH
Q 012368 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG--GLPIGAALVT-EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFL 368 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~--t~sK~lg~--G~~iG~v~~~-~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~ 368 (465)
.... . .++ .|++ +++|.++| |.-.|+++++ +++++.+...........+|..+..+...++.+ +..+
T Consensus 182 -~~~~--~-~~g--~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l~~~gl~tl--~~R~ 253 (390)
T PRK08064 182 -LQKP--L-DLG--ADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWLVLRGLKTL--HVRL 253 (390)
T ss_pred -ccCc--h-hhC--CcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcH--HHHH
Confidence 1111 1 123 4665 56799975 3456766664 677777754322222233444444332222211 2233
Q ss_pred HHHHHHHHHHHHHHHHHHH----cCCCce----------eeeccceEEEEEecCChHHHHHHHHHCCceE---eec----
Q 012368 369 ASVSKKGHYFKETLKQKLA----RNPHVK----------DVRGLGLIIGIEFDVSATPVVDACRDSGLLV---LTA---- 427 (465)
Q Consensus 369 ~~~~~~~~~l~~~l~~~~~----~~~~~~----------~~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v---~~~---- 427 (465)
++..++...+.+.|++... .+|... ...+.|.++.++++ ...+..+.+-..+++. +-+
T Consensus 254 ~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~-~~~~~~~f~~~l~l~~~~~s~G~~~s 332 (390)
T PRK08064 254 EHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ-SEEAVRQFVSHVKLPVFAVSLGAVES 332 (390)
T ss_pred HHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC-CHHHHHHHHHhCCcceEcccCCCCcc
Confidence 4444455555444443210 011110 23467889999984 2333444443445421 100
Q ss_pred ---------------------C-CCCEEEEecCCCCcHHHHHHHHHHHHH
Q 012368 428 ---------------------G-KGNVVRLVPPLIISEQELDQAVEILCK 455 (465)
Q Consensus 428 ---------------------~-~~~~lRi~~~~~~t~e~i~~~l~~l~~ 455 (465)
| .++.+|+++.+..+++.++.+.++|++
T Consensus 333 l~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~ 382 (390)
T PRK08064 333 ILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSY 382 (390)
T ss_pred eeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 1 136799999988777777766666654
No 296
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.71 E-value=1.2e-15 Score=151.85 Aligned_cols=284 Identities=17% Similarity=0.200 Sum_probs=173.2
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+.....+...+|+++++++++.+.+++++||+.|+..++.+ . + ++++||+.++.|++.........
T Consensus 41 Y~r~~~p~~~~le~~la~l~g~~~~l~~~sG~~al~~~l~l-l---~--------~Gd~Vl~~~~~y~~~~~~~~~~~-- 106 (378)
T TIGR01329 41 YTRSGNPTRTALESLLAKLDKADRAFAFSSGMAALDVITRL-L---N--------NGDEIIAGDDLYGGTDRLLTQVV-- 106 (378)
T ss_pred cCCCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHH-h---C--------CCCEEEEcCCCchHHHHHHHHHH--
Confidence 34445667889999999999888888899999998876652 2 1 68899999998865432111000
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
......+.+++..|++++++++++ ++++|++|...+..|.+.+ +++|.++|++||+++|+|+++...
T Consensus 107 -------~~~G~~v~~vd~~d~~~le~~i~~-~tklv~le~psnptg~v~d----l~~I~~la~~~g~~vivD~a~~~~- 173 (378)
T TIGR01329 107 -------PRSGVVVVHVDTTDLDKVKAALGP-KTKLVLLESPTNPLQKIVD----IRKISEMAHAQNALVVVDNTMMSP- 173 (378)
T ss_pred -------HHcCcEEEEeCCCCHHHHHHhcCc-CceEEEEECCCCCCCeeec----HHHHHHHHHHcCCEEEEECCCccc-
Confidence 011133455666689999999975 5677777766666666655 999999999999999999997421
Q ss_pred CCCccccccccCCcccEE--EecccCCC--ccceeeEEeC-HHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHH
Q 012368 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG--GLPIGAALVT-EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFL 368 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~--t~sK~lg~--G~~iG~v~~~-~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~ 368 (465)
..... . +...|++ +++|.++| +...|+++++ +++.+.+.+.........+|..+..+...++.+ +..+
T Consensus 174 ~~~~~--l---~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~tl--~~R~ 246 (378)
T TIGR01329 174 LLCNP--L---ELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGIKTL--AIRI 246 (378)
T ss_pred ccCCh--h---hcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccCCCH--HHHH
Confidence 11111 1 2234666 45699986 3678998874 455455543222122334555443333222211 2334
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCce------------------eeeccceEEEEEec-CC-hHHHHHHHHHCCceEeecC
Q 012368 369 ASVSKKGHYFKETLKQKLARNPHVK------------------DVRGLGLIIGIEFD-VS-ATPVVDACRDSGLLVLTAG 428 (465)
Q Consensus 369 ~~~~~~~~~l~~~l~~~~~~~~~~~------------------~~~~~g~~~~i~~~-~~-~~~~~~~l~~~Gv~v~~~~ 428 (465)
++-.++...+.+.|+ ++|.+. ...+.|.++.|++. .. +.+|.+.|..-++.++.++
T Consensus 247 e~~~~na~~la~~L~----~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~~i~~s~G~ 322 (378)
T TIGR01329 247 EKQQENARAIAMFLS----THPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLFSITVSFGS 322 (378)
T ss_pred HHHHHHHHHHHHHHH----hCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCcccccCCCC
Confidence 444555555555444 333111 12356788999983 12 4467777744343332211
Q ss_pred --------------------------CCCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 429 --------------------------KGNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 429 --------------------------~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
.++.+|+++.+. +.+.+++-|+++|++
T Consensus 323 ~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE----~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 323 VNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIE----DVDDLISDLDIAFVT 375 (378)
T ss_pred CCceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHHh
Confidence 135789987664 566667777777654
No 297
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.71 E-value=2.5e-15 Score=148.76 Aligned_cols=238 Identities=14% Similarity=0.074 Sum_probs=149.0
Q ss_pred ccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccC
Q 012368 133 VSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (465)
Q Consensus 133 ~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (465)
.++...++....|+++|+...+.+..++++||++|+..++.... .++|+||+.++.|+++........
T Consensus 57 ~YsR~gnPt~~~Le~~la~le~~~~~v~~sSG~aAi~~~l~all-----------~~GD~Vlv~~~~Y~~~~~l~~~~l- 124 (395)
T PRK05967 57 TYGTRGTPTTDALCKAIDALEGSAGTILVPSGLAAVTVPFLGFL-----------SPGDHALIVDSVYYPTRHFCDTML- 124 (395)
T ss_pred ccCCCCChHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHhc-----------CCCCEEEEccCCcHHHHHHHHHHH-
Confidence 34566778889999999988775556677779999999887654 278999999999987653221110
Q ss_pred CCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 213 KEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
......+.+++..+.+.+++++++ ++++|++|...++.+.+ ..+++|+++|+++|+++|+|+++...
T Consensus 125 --------~~~Gi~v~~vd~~~~e~l~~al~~-~TklV~lesPsNP~l~v----~dl~~I~~la~~~g~~vvVD~t~a~p 191 (395)
T PRK05967 125 --------KRLGVEVEYYDPEIGAGIAKLMRP-NTKVVHTEAPGSNTFEM----QDIPAIAEAAHRHGAIVMMDNTWATP 191 (395)
T ss_pred --------HhcCeEEEEeCCCCHHHHHHhcCc-CceEEEEECCCCCCCcH----HHHHHHHHHHHHhCCEEEEECCccCc
Confidence 011123445555567889999975 46788888544444433 34999999999999999999998643
Q ss_pred CCCCccccccccCCcccEE--EecccCCC-c-cceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHH
Q 012368 293 GRTGYLWAHEHYGIFPDIM--TLAKPLAG-G-LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFL 368 (465)
Q Consensus 293 gr~g~~~~~~~~~~~pdi~--t~sK~lg~-G-~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~ 368 (465)
. .+.......|++ +.+|.++| | .-.|+++.++++.+.+........-..+|..+...+..|+.+ +-.+
T Consensus 192 ~------~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~Tl--~lR~ 263 (395)
T PRK05967 192 L------YFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCAGPDDTYQILRGLRTM--GIRL 263 (395)
T ss_pred e------ecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCCCHHHHHHHHcCcccH--HHHH
Confidence 1 122222345665 56799987 4 778888888776555532111111234566554444333322 1223
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCce------------------eeeccceEEEEEec
Q 012368 369 ASVSKKGHYFKETLKQKLARNPHVK------------------DVRGLGLIIGIEFD 407 (465)
Q Consensus 369 ~~~~~~~~~l~~~l~~~~~~~~~~~------------------~~~~~g~~~~i~~~ 407 (465)
++..++...+.+.| +.+|.+. ...+.|.++.|++.
T Consensus 264 ~~~~~na~~lA~~L----~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~ 316 (395)
T PRK05967 264 EHHRKSALEIARWL----EGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLA 316 (395)
T ss_pred HHHHHHHHHHHHHH----HhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEc
Confidence 33344444444443 3444221 12467889999984
No 298
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.71 E-value=1.2e-14 Score=144.98 Aligned_cols=302 Identities=12% Similarity=0.098 Sum_probs=179.4
Q ss_pred HHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEE
Q 012368 117 ADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSF 196 (465)
Q Consensus 117 p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~ 196 (465)
++-.+++.+.+..... ....+...++++++++.++.+++++++||++|+.+++.++. . .++++||+.
T Consensus 11 ~~~~~~~~~~l~~~~~---~g~~~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~--~--------~~Gd~Viv~ 77 (375)
T PRK11706 11 GTELDYIQQAMSSGKL---CGDGGFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLD--I--------QPGDEVIMP 77 (375)
T ss_pred HHHHHHHHHHHHcCCc---cCCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhC--C--------CCCCEEEEC
Confidence 3446677777665321 11235578899999999998999999999999988877542 1 168999999
Q ss_pred cCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHH
Q 012368 197 TNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDAC 276 (465)
Q Consensus 197 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~ 276 (465)
.++|......+...+..+.+. +..++. + ..|++++++++++ ++++|++. +. .|...+ +++|.++|
T Consensus 78 ~~t~~~~~~~~~~~G~~~v~~----d~d~~~-~--~~d~~~le~~i~~-~tk~i~~~--~~-~G~~~~----~~~i~~la 142 (375)
T PRK11706 78 SYTFVSTANAFVLRGAKIVFV----DIRPDT-M--NIDETLIEAAITP-KTRAIVPV--HY-AGVACE----MDTIMALA 142 (375)
T ss_pred CCCcHHHHHHHHHcCCEEEEE----ecCCCc-C--CcCHHHHHHhcCC-CCeEEEEe--CC-CCCccC----HHHHHHHH
Confidence 999987765544433322211 111111 0 1278999999976 45555543 22 454433 88999999
Q ss_pred HHhCCEEEEeccccCCCC-CCccccccccCCcccEEEec----ccCCCccceeeEEeCHHHHhhccCCC-C---------
Q 012368 277 DDAGALLVFDEVQCGLGR-TGYLWAHEHYGIFPDIMTLA----KPLAGGLPIGAALVTEKVASAINYGD-H--------- 341 (465)
Q Consensus 277 ~~~g~llI~DEv~~g~gr-~g~~~~~~~~~~~pdi~t~s----K~lg~G~~iG~v~~~~~i~~~~~~~~-~--------- 341 (465)
++||+++|.|++|+-+.. .|.. .+-.-|+.+|| |.++.|.+.+++..++++.+.+.... +
T Consensus 143 ~~~~i~vIeD~a~a~g~~~~~~~-----~g~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 217 (375)
T PRK11706 143 KKHNLFVVEDAAQGVMSTYKGRA-----LGTIGHIGCFSFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFR 217 (375)
T ss_pred HHcCCEEEEECccccccccCCee-----eecCcCEEEEeCCCCccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhc
Confidence 999999999999973321 1211 12223777888 99987777777777788776443211 0
Q ss_pred -----------cCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCC---Cce--eee----ccceE
Q 012368 342 -----------GSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNP---HVK--DVR----GLGLI 401 (465)
Q Consensus 342 -----------~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~---~~~--~~~----~~g~~ 401 (465)
+..+..+.+..+.+.+-|+.+ +...++-+++.+++.+.|. .++ .+. ..+ ....+
T Consensus 218 ~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l--~~~~~~R~~~~~~~~~~L~----~~~~~~~~~~~~~~~~~~~~~~~ 291 (375)
T PRK11706 218 GQVDKYTWVDIGSSYLPSELQAAYLWAQLEAA--DRINQRRLALWQRYYDALA----PLAEAGRIELPSIPDDCKHNAHM 291 (375)
T ss_pred cCCCcceeeecccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhc----CCCcCCeeecCCCCCCCceeeEE
Confidence 111222334444444445432 2333334444444444443 332 111 011 11224
Q ss_pred EEEEec--CChHHHHHHHHHCCceEeec----C------------C---------CCEEEEecCCCCcHHHHHHHHHHHH
Q 012368 402 IGIEFD--VSATPVVDACRDSGLLVLTA----G------------K---------GNVVRLVPPLIISEQELDQAVEILC 454 (465)
Q Consensus 402 ~~i~~~--~~~~~~~~~l~~~Gv~v~~~----~------------~---------~~~lRi~~~~~~t~e~i~~~l~~l~ 454 (465)
+++.++ ....++.+.|.++||.+... . . .+.+.+=+....+++|++..++.|+
T Consensus 292 ~~~~~~~~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~ 371 (375)
T PRK11706 292 FYIKLRDLEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTIL 371 (375)
T ss_pred EEEEECCcCCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHH
Confidence 445443 34678999999999986421 0 0 1123332234468999999999998
Q ss_pred HHH
Q 012368 455 KTL 457 (465)
Q Consensus 455 ~~l 457 (465)
+++
T Consensus 372 ~~~ 374 (375)
T PRK11706 372 EFF 374 (375)
T ss_pred HHh
Confidence 764
No 299
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.70 E-value=1.6e-14 Score=146.85 Aligned_cols=313 Identities=14% Similarity=0.108 Sum_probs=183.2
Q ss_pred CCHHHHHHHHHHH-hhccccc---CC-CCCHHHHHHHH----HHHhhcC-CC-eEEe---cCCHHHHHHHHHHHHHHHhh
Q 012368 115 GDADWIKAVVDQA-NVLTHVS---NM-YYSIPQIELAK----RLVACSF-AD-RVFF---SNTGTEANEAAIKFARKFQR 180 (465)
Q Consensus 115 ~~p~v~~a~~~~~-~~~~~~~---~~-~~~~~~~~la~----~l~~~~~-~~-~v~~---~~sG~eA~~~al~~a~~~t~ 180 (465)
.+|.|++|+...+ .++..++ .. ..+....++++ +..+.++ .+ .+.+ .+||+.||..++..+..
T Consensus 46 ~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~--- 122 (475)
T PLN03226 46 TSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQ--- 122 (475)
T ss_pred CCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCC---
Confidence 5688999998888 4433221 11 12334444433 2344455 22 2222 38999999999987652
Q ss_pred hcCCCCCCCCceEEEEcCCc-----ccCccccccccCCCCcCCCCCCCCCCceEeeCC------CHHHHHhhcCCCCeEE
Q 012368 181 HSNPDSKEPATEFVSFTNSF-----HGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG------NIEATRKLIQPGKTAA 249 (465)
Q Consensus 181 ~~~~~~~~~~~~ii~~~~~y-----hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~le~~l~~~~~a~ 249 (465)
++|+|+..+..- |++......++....+. ....++++ |+++|++++...+++.
T Consensus 123 --------pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~--------~~~~y~~~~~~g~iD~d~Le~~l~~~~pkl 186 (475)
T PLN03226 123 --------PHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYF--------ESMPYRLDESTGLIDYDKLEKKAMLFRPKL 186 (475)
T ss_pred --------CCCEEEECCCCcCcchhhhhhhcccccccceEEE--------EeeeeeecCCCCCcCHHHHHHHHhhcCCeE
Confidence 688898855322 33322111111111000 00011223 8999999987434555
Q ss_pred EEE-cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEE--EecccCCCccceeeE
Q 012368 250 VFV-EPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAGGLPIGAA 326 (465)
Q Consensus 250 vi~-ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~--t~sK~lg~G~~iG~v 326 (465)
|++ +.+.+. ..+ +++|+++|++||++|++|++|. +|..+........+ ..|++ |++|+|.|.. .|++
T Consensus 187 Iv~~~S~~s~---~~D----~a~i~~ia~~~ga~LlvD~AH~-~Gli~~~~~~~p~~-~~Div~~t~hK~L~GP~-Gg~I 256 (475)
T PLN03226 187 IIAGASAYPR---DWD----YARMRKIADKVGALLMCDMAHI-SGLVAAQEAASPFE-YCDVVTTTTHKSLRGPR-GGMI 256 (475)
T ss_pred EEEecCcCCC---ccC----HHHHHHHHHHcCCEEEEEchhh-hCcccCCCCCCCCC-CCeEEEecCcccccCCC-ceEE
Confidence 555 554433 222 7799999999999999999986 44333221111111 35766 4669996532 3777
Q ss_pred EeCHHHH-----------h---hccCCC-CcCCCCChHHHHHHHHHHHHHhcCc---hHHHHHHHHHHHHHHHHHHHHHc
Q 012368 327 LVTEKVA-----------S---AINYGD-HGSTFAGSPLVCNAAIAVLDKISNP---AFLASVSKKGHYFKETLKQKLAR 388 (465)
Q Consensus 327 ~~~~~i~-----------~---~~~~~~-~~~t~~~~~~~~~aa~a~L~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~ 388 (465)
++++++. + .+.... ...+-+.++...++..++|+.+.+. .+.+++.++.++|++.|.+. .
T Consensus 257 ~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~--G 334 (475)
T PLN03226 257 FFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK--G 334 (475)
T ss_pred EEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC--C
Confidence 7777543 2 122111 1112234566667777888887543 36778888888888877663 3
Q ss_pred CCCceeeeccceEEEEEec---CChHHHHHHHHHCCceEeecC--------CCCEEEE----ecCCCCcHHHHHHHHHHH
Q 012368 389 NPHVKDVRGLGLIIGIEFD---VSATPVVDACRDSGLLVLTAG--------KGNVVRL----VPPLIISEQELDQAVEIL 453 (465)
Q Consensus 389 ~~~~~~~~~~g~~~~i~~~---~~~~~~~~~l~~~Gv~v~~~~--------~~~~lRi----~~~~~~t~e~i~~~l~~l 453 (465)
+.++..- ....+..+++. ....++.+.|.+.||.+.... ....+|+ -....++++|++++.+.|
T Consensus 335 ~~l~~~~-t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i 413 (475)
T PLN03226 335 YKLVTGG-TDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFL 413 (475)
T ss_pred CEEEcCC-CCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHH
Confidence 3222110 12345556662 356678888889999886431 1244787 335678999999999999
Q ss_pred HHHHHH
Q 012368 454 CKTLPV 459 (465)
Q Consensus 454 ~~~l~~ 459 (465)
.++++.
T Consensus 414 ~~~~~~ 419 (475)
T PLN03226 414 HRAVTI 419 (475)
T ss_pred HHHHHH
Confidence 999874
No 300
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.70 E-value=1.2e-14 Score=144.99 Aligned_cols=301 Identities=15% Similarity=0.138 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEE
Q 012368 117 ADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSF 196 (465)
Q Consensus 117 p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~ 196 (465)
++-.+++.+.+..... +..+...+|+++++++++.+.+++++||++|+.++++.+. . .++++||+.
T Consensus 14 ~~e~~~~~~~l~~~~~----~~g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~--~--------~~Gd~Viv~ 79 (379)
T PRK11658 14 DEELAAVKEVLRSGWI----TTGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALG--I--------GPGDEVITP 79 (379)
T ss_pred HHHHHHHHHHHHcCCc----cCCHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcC--C--------CCCCEEEEC
Confidence 4567788877765321 2345578999999999998889999999999999998652 1 168999999
Q ss_pred cCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHH
Q 012368 197 TNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDAC 276 (465)
Q Consensus 197 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~ 276 (465)
+++|.+....+...+..+.+. +..++.. .-|++++++++++ ++++|+ |++. .|...+ +++|.++|
T Consensus 80 ~~~~~~~~~~~~~~G~~~v~v----d~~~~~~---~~d~~~l~~~i~~-~tkav~--~~~~-~G~~~d----~~~i~~~a 144 (379)
T PRK11658 80 SLTWVSTLNMIVLLGATPVMV----DVDRDTL---MVTPEAIEAAITP-RTKAII--PVHY-AGAPAD----LDAIRAIG 144 (379)
T ss_pred CCcHHHHHHHHHHcCCEEEEE----ecCCCcC---CcCHHHHHHhccc-CCeEEE--EeCC-CCCcCC----HHHHHHHH
Confidence 999987754433332222111 1111110 0278999999975 455655 4444 344443 88999999
Q ss_pred HHhCCEEEEecccc-CCCCCCccccccccCCcccEEEec--ccCCCccceeeEEeC-HHHHhhccCCC-C----------
Q 012368 277 DDAGALLVFDEVQC-GLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVT-EKVASAINYGD-H---------- 341 (465)
Q Consensus 277 ~~~g~llI~DEv~~-g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~-~~i~~~~~~~~-~---------- 341 (465)
++||+++|+|++|+ |.-..|.. ....+ .++.+|+ |.+++| +.|+++.+ +++.+.++... +
T Consensus 145 ~~~gi~vi~D~a~a~g~~~~~~~--~g~~g--~~~~Sf~~~K~l~~g-~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~ 219 (379)
T PRK11658 145 ERYGIPVIEDAAHAVGTYYKGRH--IGARG--TAIFSFHAIKNITCA-EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQ 219 (379)
T ss_pred HHcCCeEEEECCCccCCeECCee--cCCCC--CEEEeCCCCCcCccc-CceEEEECCHHHHHHHHHHHHcCCCcchhhhh
Confidence 99999999999997 22122211 12233 2667776 666544 67777764 67766553210 0
Q ss_pred -------------cCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCce--eee--ccc--eEE
Q 012368 342 -------------GSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVK--DVR--GLG--LII 402 (465)
Q Consensus 342 -------------~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~--~~g--~~~ 402 (465)
+..+..+.+..+.++.-|+.+ ++..++-+++.+++++.| ...+... ... ... .++
T Consensus 220 ~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l--~~~~~~r~~~a~~~~~~L----~~~~~~~~~~~~~~~~~~~~~~ 293 (379)
T PRK11658 220 TQGRAPQAEVLTPGYKYNLADINAAIALVQLAKL--EALNARRREIAARYLQAL----ADLPFQPLSLPAWPHQHAWHLF 293 (379)
T ss_pred cccCCCcceeeccccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHh----cCCCCccCcCCCCCCceeEEEE
Confidence 011122233333333333322 333444444445554444 3333211 111 111 122
Q ss_pred EEEec-----CChHHHHHHHHHCCceEeec----C--------------------CCCEEEEecCCCCcHHHHHHHHHHH
Q 012368 403 GIEFD-----VSATPVVDACRDSGLLVLTA----G--------------------KGNVVRLVPPLIISEQELDQAVEIL 453 (465)
Q Consensus 403 ~i~~~-----~~~~~~~~~l~~~Gv~v~~~----~--------------------~~~~lRi~~~~~~t~e~i~~~l~~l 453 (465)
.+.++ ....++.+.|.++||.+... . ....+.+=++...|+++++..++.|
T Consensus 294 ~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i 373 (379)
T PRK11658 294 IIRVDEERCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITAL 373 (379)
T ss_pred EEEECCccccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHH
Confidence 33332 24678999999999876521 0 0123433334557999999999999
Q ss_pred HHHH
Q 012368 454 CKTL 457 (465)
Q Consensus 454 ~~~l 457 (465)
++++
T Consensus 374 ~~~~ 377 (379)
T PRK11658 374 QQIA 377 (379)
T ss_pred HHHH
Confidence 8865
No 301
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.70 E-value=4.8e-15 Score=147.75 Aligned_cols=305 Identities=13% Similarity=0.030 Sum_probs=180.9
Q ss_pred CCHH-HHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcC-C--CeEEecC-CHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 012368 115 GDAD-WIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSF-A--DRVFFSN-TGTEANEAAIKFARKFQRHSNPDSKEP 189 (465)
Q Consensus 115 ~~p~-v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~--~~v~~~~-sG~eA~~~al~~a~~~t~~~~~~~~~~ 189 (465)
.+|. |++|+.+.+....|... -......+..+.|++.++ . ++|+|+. |||++++.++..... +
T Consensus 23 ~~~~~v~~a~~~~~~~~~hr~~-~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~-----------~ 90 (378)
T PRK03080 23 KRPGWQLEALADALLGRSHRQK-PVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLG-----------A 90 (378)
T ss_pred CChHHHHHHHHhhhcccCcCCH-HHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCC-----------C
Confidence 4567 88888765432112111 122336677888888887 2 3788875 899999998876531 2
Q ss_pred CceEEEEcCCcccCcccc-c--cccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCH
Q 012368 190 ATEFVSFTNSFHGRTMGA-L--ALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATK 266 (465)
Q Consensus 190 ~~~ii~~~~~yhg~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~ 266 (465)
++.+++.. +.||..... + ..+..... ..+...+. ..|+++++ . ++.|.+..+...+|.+.|
T Consensus 91 ~~~~vi~~-g~f~~~~~~~~~~~~g~~~v~---~~~~~~g~----~~d~~~i~----~--~~~V~~~h~~t~tG~~~p-- 154 (378)
T PRK03080 91 RRVDHLAW-ESFGSKWATDVVKQLKLEDPR---VLEADYGS----LPDLSAVD----F--DRDVVFTWNGTTTGVRVP-- 154 (378)
T ss_pred CcceEEEe-CHHHHHHHHHHHhhcCCCCce---EeccCCCC----CCCHhhcC----C--CCCEEEEecCCccceecc--
Confidence 22233334 455653221 1 11110100 00000000 01455432 2 234677777777888877
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccCCCccceeeEEeCHHHHhhccCCC----
Q 012368 267 EFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAINYGD---- 340 (465)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~~~~---- 340 (465)
+++|.+ +++|+++|+|-+|+ +|.. ....+ + .|++++| |+|++...+|+++.+++.++.+.+..
T Consensus 155 --i~~I~~--~~~g~~~vVDa~qs-~G~~--pidv~--~--iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~ 223 (378)
T PRK03080 155 --VARWIG--ADREGLTICDATSA-AFAL--PLDWS--K--LDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARP 223 (378)
T ss_pred --chhhcc--ccCCCeEEEecccc-cccC--CCCHH--H--CcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCC
Confidence 888888 78999999999987 4322 22222 2 4888776 99987677899999999887765421
Q ss_pred ------------------CcCCCC-ChHHHHHHHHHHHHHhcCc-h---HHHHHHHHHHHHHHHHHHHHHcCCCcee---
Q 012368 341 ------------------HGSTFA-GSPLVCNAAIAVLDKISNP-A---FLASVSKKGHYFKETLKQKLARNPHVKD--- 394 (465)
Q Consensus 341 ------------------~~~t~~-~~~~~~~aa~a~L~~~~~~-~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~--- 394 (465)
...|.+ .+..+..+..++|+.+.+. . ..++.+++.+++++.|+ +.+.+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~----~~~~~~~~~~ 299 (378)
T PRK03080 224 IPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAE----KTPWATPLVA 299 (378)
T ss_pred CchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH----hCCCcccccC
Confidence 012222 2334455556777776543 2 33444445555555444 3442111
Q ss_pred -ee-ccceEEEEEecC----ChHHHHHHHHHCCceEeecC---CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 395 -VR-GLGLIIGIEFDV----SATPVVDACRDSGLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 395 -~~-~~g~~~~i~~~~----~~~~~~~~l~~~Gv~v~~~~---~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
.. ..+.++.+.++. ...++...|+++|+.+..++ .++.+|++++...|++|++.+++.|++++++++.
T Consensus 300 ~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 300 DPATRSNTSVTLDFVDAQAAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred CccccCccEEEEEcCCchHHHHHHHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 11 123456666533 23457777888898886543 1368999999999999999999999999887763
No 302
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.68 E-value=2.6e-14 Score=154.28 Aligned_cols=290 Identities=18% Similarity=0.157 Sum_probs=190.2
Q ss_pred HHHHHHHHHhhcCCCeEEecCCHH----HHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcC
Q 012368 142 QIELAKRLVACSFADRVFFSNTGT----EANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYR 217 (465)
Q Consensus 142 ~~~la~~l~~~~~~~~v~~~~sG~----eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 217 (465)
..+++++|+++++.+.|.|+++++ +|+.++++..... ++. ...++|+....-||.........+.
T Consensus 570 ~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~~~---~Gd----~~r~~vli~~~aH~sn~a~a~~~G~---- 638 (993)
T PLN02414 570 FEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYHLS---RGD----HHRNVCIIPVSAHGTNPASAAMCGM---- 638 (993)
T ss_pred HHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHHhc---cCC----CCCCEEEeCCCcCccCHHHHHHCCC----
Confidence 568899999999999999998887 7888877765421 111 1123566666788887655443221
Q ss_pred CCCCCCCCCceEeeC-----CCHHHHHhhcCC--CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc
Q 012368 218 SPFEPVMPGVNFVEY-----GNIEATRKLIQP--GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC 290 (465)
Q Consensus 218 ~~~~~~~~~~~~~~~-----~d~~~le~~l~~--~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~ 290 (465)
.+..+|. -|+++|++++++ +++++|++...++.+|...+ +++|.++|+++|+++++|-++.
T Consensus 639 --------~vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~----I~eI~~iah~~Galv~vDgAq~ 706 (993)
T PLN02414 639 --------KIVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG----IDEICDIIHDNGGQVYMDGANM 706 (993)
T ss_pred --------EEEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccch----HHHHHHHHHHcCCEEEEEecCH
Confidence 1222222 189999999984 35788777766666776655 9999999999999999999985
Q ss_pred CCCCCCccccccccCCcccEEEec--ccCC-----CccceeeEEeCHHHHhhccCC---C--------C---cCCCC---
Q 012368 291 GLGRTGYLWAHEHYGIFPDIMTLA--KPLA-----GGLPIGAALVTEKVASAINYG---D--------H---GSTFA--- 346 (465)
Q Consensus 291 g~gr~g~~~~~~~~~~~pdi~t~s--K~lg-----~G~~iG~v~~~~~i~~~~~~~---~--------~---~~t~~--- 346 (465)
.+..+ ......+..|+++++ |+|+ ||-.+|++.++++++..+-.. . . .+|.+
T Consensus 707 -~a~~~---l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~ 782 (993)
T PLN02414 707 -NAQVG---LTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAP 782 (993)
T ss_pred -HhccC---cCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchh
Confidence 11111 111123446888774 8775 246689999999877655311 0 0 12222
Q ss_pred -ChHHHHHHHHHHHHHhcCchH---HHHHHHHHHHHHHHHHHHHHcCCCceeeeccce-E--EEEEec-------CChHH
Q 012368 347 -GSPLVCNAAIAVLDKISNPAF---LASVSKKGHYFKETLKQKLARNPHVKDVRGLGL-I--IGIEFD-------VSATP 412 (465)
Q Consensus 347 -~~~~~~~aa~a~L~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~-~--~~i~~~-------~~~~~ 412 (465)
++.+.+.++...+..+..+.+ .++...+..+++++|.+. ++.. .....|. + +.+.+. .+..+
T Consensus 783 ~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~---~~~~-~~~~~~~~~hEfv~~~~~l~~~~g~~~~d 858 (993)
T PLN02414 783 WGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGH---YPVL-FRGKNGTCAHEFIIDLRPFKNTAGIEPED 858 (993)
T ss_pred hhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhh---CCcc-ccCCCCCeeeeEEEeccccccccCCCHHH
Confidence 334555566666776665655 566667778888877662 2221 1111122 1 112221 34578
Q ss_pred HHHHHHHCCceEeecC--CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 413 VVDACRDSGLLVLTAG--KGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 413 ~~~~l~~~Gv~v~~~~--~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
+.++|.+.|+...... ..+.+|++|.-..+++|||+++++|..+..+.++
T Consensus 859 i~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 859 VAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred HHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998765321 1478999999999999999999999999888765
No 303
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.68 E-value=1.1e-14 Score=146.79 Aligned_cols=164 Identities=20% Similarity=0.262 Sum_probs=118.3
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+....++...+|+++|++..+.+..++++||++|+.++++.+.. ++++||+..+.|++........
T Consensus 57 y~r~~~p~~~~le~~lA~l~g~~~al~~~SG~~Ai~~al~all~-----------pGd~VIv~~~~y~~t~~~~~~~--- 122 (427)
T PRK05994 57 YTRITNPTNAVLEERVAALEGGTAALAVASGHAAQFLVFHTLLQ-----------PGDEFIAARKLYGGSINQFGHA--- 122 (427)
T ss_pred eECCCCccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHhC-----------CCCEEEEecCcchhHHHHHHHH---
Confidence 34455666889999999999977899999999999999987652 6899999999997754221110
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
.......+.+++..|++++++++++ ++++|+++..++..|.+.+ +++|.++|++||+++|+|+++...
T Consensus 123 ------~~~~G~~v~~vd~~d~~~l~~ai~~-~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~a~a~~- 190 (427)
T PRK05994 123 ------FKSFGWQVRWADADDPASFERAITP-RTKAIFIESIANPGGTVTD----IAAIAEVAHRAGLPLIVDNTLASP- 190 (427)
T ss_pred ------HHhcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCcccc-
Confidence 0011233455666689999999975 5778888877777777665 899999999999999999998621
Q ss_pred CCCccccccccCCcccEEE--ecccCCC-ccceeeEEe
Q 012368 294 RTGYLWAHEHYGIFPDIMT--LAKPLAG-GLPIGAALV 328 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~t--~sK~lg~-G~~iG~v~~ 328 (465)
. ........+|+++ ++|.++| |-.+|.++.
T Consensus 191 ~-----~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 191 Y-----LIRPIEHGADIVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred c-----cCCccccCCcEEEEcCccccCCCCCcEEEEEE
Confidence 1 1222345577775 6699986 545555544
No 304
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.68 E-value=2.3e-14 Score=143.37 Aligned_cols=215 Identities=20% Similarity=0.227 Sum_probs=138.4
Q ss_pred CHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccccccc-C-CcccEE
Q 012368 234 NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHY-G-IFPDIM 311 (465)
Q Consensus 234 d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~-~-~~pdi~ 311 (465)
|++++++++.+.+..++++ ...+.++ ..+ +++|+++|++||++|++|++|+ +|..|.......+ . -..|++
T Consensus 208 D~d~l~~~~~~~~plvii~-g~S~~~~-~~d----l~~i~eia~~~gA~L~VD~AH~-~Gligg~~~~~~~~~~~~~D~v 280 (493)
T PRK13580 208 DYDEIAALAREFKPLILVA-GYSAYPR-RVN----FAKLREIADEVGAVLMVDMAHF-AGLVAGKVFTGDEDPVPHADIV 280 (493)
T ss_pred CHHHHHHHHhhcCCEEEEe-CccccCC-CcC----HHHHHHHHHHcCCEEEEECchh-hceeccccchhhcCCCCCCcEE
Confidence 7899999998654544444 4444444 444 9999999999999999999997 5444321111111 1 135766
Q ss_pred --EecccCCCccceeeEEeCHHHHhhccCCCCcCCCCC-hHHHHHHHHHHHHHhcCc---hHHHHHHHHHHHHHHHHHHH
Q 012368 312 --TLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAG-SPLVCNAAIAVLDKISNP---AFLASVSKKGHYFKETLKQK 385 (465)
Q Consensus 312 --t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~-~~~~~~aa~a~L~~~~~~---~~~~~~~~~~~~l~~~l~~~ 385 (465)
|++|++.|. +.|++++++++.+.+.... ...+++ .+..++|+..++..+.++ ++.+++.++.++|++.|.+.
T Consensus 281 tgT~hKaL~GP-~GG~I~~~~~l~~~L~~a~-P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~ 358 (493)
T PRK13580 281 TTTTHKTLRGP-RGGLVLAKKEYADAVDKGC-PLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR 358 (493)
T ss_pred EeCChhhccCC-CeEEEEecHHHHHHHhhCC-CcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc
Confidence 467999653 3588899999888884221 222322 233444444455555433 37888899999999888774
Q ss_pred HHcCCCceeeeccceEEEEEecCC---hHHHHHHHHHCCceEeec-------C--CCCEEEEecCC----CCcHHHHHHH
Q 012368 386 LARNPHVKDVRGLGLIIGIEFDVS---ATPVVDACRDSGLLVLTA-------G--KGNVVRLVPPL----IISEQELDQA 449 (465)
Q Consensus 386 ~~~~~~~~~~~~~g~~~~i~~~~~---~~~~~~~l~~~Gv~v~~~-------~--~~~~lRi~~~~----~~t~e~i~~~ 449 (465)
.++.+.. .....++.+.+... ...+.+.|.+.||++.+. + ....|||+++. .++++|++++
T Consensus 359 --G~~vv~g-gTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~i 435 (493)
T PRK13580 359 --GARLVTG-GTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEV 435 (493)
T ss_pred --CCCccCC-CCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHH
Confidence 3332211 12345667777322 235667889999998632 1 02569998887 5579999999
Q ss_pred HHHHHHHHHHh
Q 012368 450 VEILCKTLPVL 460 (465)
Q Consensus 450 l~~l~~~l~~~ 460 (465)
++.|.++++..
T Consensus 436 ad~l~~~l~~~ 446 (493)
T PRK13580 436 AELIVKVLSNT 446 (493)
T ss_pred HHHHHHHHHhh
Confidence 99999888753
No 305
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.68 E-value=1.7e-14 Score=144.28 Aligned_cols=302 Identities=19% Similarity=0.169 Sum_probs=178.8
Q ss_pred HHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEE
Q 012368 117 ADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSF 196 (465)
Q Consensus 117 p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~ 196 (465)
++-.+++.+.+..... ...+...++++.++++++.+..++++||++|+..+++.+. . .++++||+.
T Consensus 10 ~~~~~~v~~~~~~~~~----~~g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~--~--------~~Gd~Viv~ 75 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFL----TQGPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALG--V--------GPGDRVWTT 75 (380)
T ss_pred HHHHHHHHHHHhcCCc----cCChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcC--C--------CCCCEEEeC
Confidence 4457777777765321 2234467899999999987777888899999999998652 1 168899999
Q ss_pred cCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCC---CCeEEEEEcccCCCCCcccCCHHHHHHHH
Q 012368 197 TNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP---GKTAAVFVEPIQGEGGIYSATKEFLQFLR 273 (465)
Q Consensus 197 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~a~vi~ep~~~~~G~~~~~~~~l~~l~ 273 (465)
.++|++........+..+.+. +..+... ..|++++++.++. .++++|++ ++. .|...+ +++|.
T Consensus 76 ~~~~~~~~~~~~~~G~~~~~~----~~~~~~~---~~d~~~l~~~i~~~~~~~t~~v~~--~~~-~G~~~~----~~~i~ 141 (380)
T TIGR03588 76 PITFVATANCALYCGAKVDFV----DIDPDTG---NIDEDALEKKLAAAKGKLPKAIVP--VDF-AGKSVD----MQAIA 141 (380)
T ss_pred CcchHHHHHHHHHcCCEEEEE----ecCCCcC---CcCHHHHHHHhhcccCCCceEEEE--eCC-CCccCC----HHHHH
Confidence 999977654333333222111 1111110 1278999999972 24556653 222 354443 89999
Q ss_pred HHHHHhCCEEEEeccccCCCCCCccccccccCC--cccEEEec----ccCCCccceeeEEe-CHHHHhhccCCC-C----
Q 012368 274 DACDDAGALLVFDEVQCGLGRTGYLWAHEHYGI--FPDIMTLA----KPLAGGLPIGAALV-TEKVASAINYGD-H---- 341 (465)
Q Consensus 274 ~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~--~pdi~t~s----K~lg~G~~iG~v~~-~~~i~~~~~~~~-~---- 341 (465)
++|++||++||+|++|+ +|.. +.....+. .-|+.++| |.++.| ..|+++. ++++.+.++... +
T Consensus 142 ~l~~~~~~~lI~D~a~a-~g~~---~~~~~~g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~~g~~~ 216 (380)
T TIGR03588 142 ALAKKHGLKIIEDASHA-LGAE---YGGKPVGNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRSHGITK 216 (380)
T ss_pred HHHHHcCCEEEEECCCc-ccCc---cCCEeCCCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHHCCCCC
Confidence 99999999999999997 3211 11111222 23777765 888655 4566665 466665443210 0
Q ss_pred --------------------cCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceee-e--cc
Q 012368 342 --------------------GSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDV-R--GL 398 (465)
Q Consensus 342 --------------------~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~--~~ 398 (465)
+..+..+.+..+.+++.|+.+ +...++-+++.+++.+.|.. .+.+... . +.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l--~~~~~~r~~~~~~~~~~L~~----~~~~~~~~~~~~~ 290 (380)
T TIGR03588 217 DPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKL--DRFVAKRREIAARYDRLLKD----LPYFTPLTIPLGS 290 (380)
T ss_pred CcccccccccCcceeeeeccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcC----CCCccCCCCCCCC
Confidence 011222444444455555533 34445555555565555544 3322111 1 11
Q ss_pred ---ceEEEEEec----CChHHHHHHHHHCCceEeecC--------------C----------CCEEEEecCCCCcHHHHH
Q 012368 399 ---GLIIGIEFD----VSATPVVDACRDSGLLVLTAG--------------K----------GNVVRLVPPLIISEQELD 447 (465)
Q Consensus 399 ---g~~~~i~~~----~~~~~~~~~l~~~Gv~v~~~~--------------~----------~~~lRi~~~~~~t~e~i~ 447 (465)
..++.+.+. ....++.+.|.++||.+.... . ...+++-++...|++|++
T Consensus 291 ~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~ 370 (380)
T TIGR03588 291 KSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQ 370 (380)
T ss_pred EeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHH
Confidence 122233332 246789999999999775210 0 134666566678999999
Q ss_pred HHHHHHHHHH
Q 012368 448 QAVEILCKTL 457 (465)
Q Consensus 448 ~~l~~l~~~l 457 (465)
.+++.|++++
T Consensus 371 ~i~~~l~~~~ 380 (380)
T TIGR03588 371 RVVETLRKVL 380 (380)
T ss_pred HHHHHHHHhC
Confidence 9999998764
No 306
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=1.4e-14 Score=144.97 Aligned_cols=309 Identities=11% Similarity=0.086 Sum_probs=179.9
Q ss_pred CHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEE
Q 012368 116 DADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVS 195 (465)
Q Consensus 116 ~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~ 195 (465)
..+-.+++.+.... .+.+.+..++...+|++.++++.+.+.++.++||+.|+.+++..+.. ++|+||+
T Consensus 38 ~~~~~~~~~~~~~~-g~~ysR~~nPtv~~lE~~la~leg~~~av~~~SG~aAi~~al~all~-----------~GD~VI~ 105 (432)
T PRK06702 38 TSDDLAALFNLEAE-GYIYTRIGNPTLAAFEQKLAELEGGVGAVATASGQAAIMLAVLNICS-----------SGDHLLC 105 (432)
T ss_pred CHHHHHHHHhcccc-CceeECCCCcHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhcC-----------CCCEEEE
Confidence 34444444443322 22223344677899999999999988889999999999999986541 6899999
Q ss_pred EcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCC-CHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHH
Q 012368 196 FTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG-NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRD 274 (465)
Q Consensus 196 ~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~ 274 (465)
..++|.+........ .......+.+++.+ |+++++++|++ ++++|++|...+..+.++. +++|++
T Consensus 106 ~~~~Y~~T~~~~~~~---------l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~v~D----i~~I~~ 171 (432)
T PRK06702 106 SSTVYGGTFNLFGVS---------LRKLGIDVTFFNPNLTADEIVALAND-KTKLVYAESLGNPAMNVLN----FKEFSD 171 (432)
T ss_pred CCCchHHHHHHHHHH---------HHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEEcCCCccccccC----HHHHHH
Confidence 999996554321110 00112334555554 88999999986 4667777765444444444 999999
Q ss_pred HHHHhCCEEEEeccccCCCCCCccccccccCCcccEE--EecccCCC-ccce-eeEEeCH----------HHHh------
Q 012368 275 ACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPI-GAALVTE----------KVAS------ 334 (465)
Q Consensus 275 l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~--t~sK~lg~-G~~i-G~v~~~~----------~i~~------ 334 (465)
+|++||+++|+|+++. .+..+..+....||+ +++|.++| +--+ |.++... ++.+
T Consensus 172 iA~~~gi~livD~T~~------tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~ 245 (432)
T PRK06702 172 AAKELEVPFIVDNTLA------TPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYH 245 (432)
T ss_pred HHHHcCCEEEEECCCC------chhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCccccccccccccccccccc
Confidence 9999999999999863 222333333445666 57798886 3222 3333211 1110
Q ss_pred ---------------hcc-CCCCcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH----cCCCce-
Q 012368 335 ---------------AIN-YGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLA----RNPHVK- 393 (465)
Q Consensus 335 ---------------~~~-~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~~~- 393 (465)
... ..........+|+.+..++..|+.+ +..+++..++...+.+.|++... .+|...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~Tl--~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~ 323 (432)
T PRK06702 246 GVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLETL--HLRMERHSENALAVAKWLADHERIEWVNYPGLDS 323 (432)
T ss_pred ccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccCcH--HHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCC
Confidence 000 0011122467788777766666533 33445555666666555554210 112111
Q ss_pred ---------ee-eccceEEEEEecCCh---HHHHHHHH--HCCc--------eEeec---------------C-CCCEEE
Q 012368 394 ---------DV-RGLGLIIGIEFDVSA---TPVVDACR--DSGL--------LVLTA---------------G-KGNVVR 434 (465)
Q Consensus 394 ---------~~-~~~g~~~~i~~~~~~---~~~~~~l~--~~Gv--------~v~~~---------------~-~~~~lR 434 (465)
.. .|.|.++.+++.... .+|.+.|. ..++ +..|. | ..+.+|
T Consensus 324 ~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liR 403 (432)
T PRK06702 324 NENYSLAQKYLKKGASGVLTFGIKGGLEAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIR 403 (432)
T ss_pred CccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEE
Confidence 11 467889999984222 23433332 1111 11111 1 135799
Q ss_pred EecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 435 LVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 435 i~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
+++.+ |+.+.+++-|+++|..-++
T Consensus 404 lSvGl----Ed~eDLi~Dl~~Al~~~~~ 427 (432)
T PRK06702 404 LSVGI----EDVSDIIADLEAALVGGKQ 427 (432)
T ss_pred EEecc----CCHHHHHHHHHHHHhcCcc
Confidence 98765 4567778888888875444
No 307
>PRK05939 hypothetical protein; Provisional
Probab=99.67 E-value=2e-14 Score=143.61 Aligned_cols=166 Identities=20% Similarity=0.193 Sum_probs=118.7
Q ss_pred cccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCcccccccc
Q 012368 132 HVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALT 211 (465)
Q Consensus 132 ~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~ 211 (465)
+.+....++...+|+++|++..+.+..+.++||+.|+..++..+.. ++++||+.++.|++.......+.
T Consensus 39 ~~Y~r~g~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all~-----------~Gd~Vv~~~~~y~~t~~~~~~l~ 107 (397)
T PRK05939 39 FTYARQGTPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLLR-----------AGDHLVSSQFLFGNTNSLFGTLR 107 (397)
T ss_pred CCcCCCCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHcC-----------CCCEEEECCCccccHHHHHHHHH
Confidence 3345567788899999999999977778888899999998876642 68999999988855432111110
Q ss_pred CCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 012368 212 SKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG 291 (465)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g 291 (465)
.....+.+++..|++++++++++ ++++|+++..++..|.+.+ +++|.++|+++|+++|+|++|..
T Consensus 108 ----------~~G~~v~~v~~~d~e~l~~~l~~-~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~t~a~ 172 (397)
T PRK05939 108 ----------GLGVEVTMVDATDVQNVAAAIRP-NTRMVFVETIANPGTQVAD----LAGIGALCRERGLLYVVDNTMTS 172 (397)
T ss_pred ----------hcCCEEEEECCCCHHHHHHhCCC-CCeEEEEECCCCCCCCHHh----HHHHHHHHHHcCCEEEEECCccc
Confidence 11133455666789999999975 5677888877666676644 99999999999999999999852
Q ss_pred CCCCCccccccccCCcccEE--EecccCCC-ccceeeEEeC
Q 012368 292 LGRTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPIGAALVT 329 (465)
Q Consensus 292 ~gr~g~~~~~~~~~~~pdi~--t~sK~lg~-G~~iG~v~~~ 329 (465)
.. .+.......|++ +++|.++| |..+|+++..
T Consensus 173 ~~------~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 173 PW------LFRPKDVGASLVINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred cc------ccCccccCCEEEEecCeecccCCCCeEEEEEec
Confidence 21 112222234555 67899997 8888887764
No 308
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.67 E-value=2.7e-15 Score=149.14 Aligned_cols=173 Identities=14% Similarity=0.099 Sum_probs=118.0
Q ss_pred ccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccC
Q 012368 133 VSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS 212 (465)
Q Consensus 133 ~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~ 212 (465)
.+..+.++...+|+++++++.+.+..++++||+.|+.+++.++. ++++||+.++.|++.........
T Consensus 43 ~y~r~~~p~~~~Le~~la~l~g~~~al~~~SG~~Al~~~l~~l~------------pGd~Vi~~~~~y~~t~~~~~~~~- 109 (380)
T PRK06176 43 EYSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIHAVFSLFQ------------SGDHVLLGDDVYGGTFRLFDKVL- 109 (380)
T ss_pred cccCCCChhHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHHHcC------------CCCEEEEcCCChhHHHHHHHHHH-
Confidence 34566777789999999999987777888999999986664321 68999999999876542221110
Q ss_pred CCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 213 KEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
......+.+++..|++++++++++ ++++|++|..++..|.+.+ +++|.++|++||+++|+|++|...
T Consensus 110 --------~~~gi~v~~vd~~d~e~l~~ai~~-~t~lV~lesP~Nptg~~~d----i~~I~~la~~~gi~vivD~t~a~~ 176 (380)
T PRK06176 110 --------VKNGLSCTIIDTSDLSQIKKAIKP-NTKALYLETPSNPLLKITD----LAQCASVAKDHGLLTIVDNTFATP 176 (380)
T ss_pred --------HhcCeEEEEcCCCCHHHHHHhcCc-CceEEEEECCCCCCceecC----HHHHHHHHHHcCCEEEEECCcccc
Confidence 011122344555689999999975 4677777655555565554 889999999999999999998742
Q ss_pred CCCCccccccccCCcccEEEe--cccCCC-c-cceeeEEeC-HHHHhhcc
Q 012368 293 GRTGYLWAHEHYGIFPDIMTL--AKPLAG-G-LPIGAALVT-EKVASAIN 337 (465)
Q Consensus 293 gr~g~~~~~~~~~~~pdi~t~--sK~lg~-G-~~iG~v~~~-~~i~~~~~ 337 (465)
..+.. .+...|++++ +|.++| | .-.|+++.+ +++.+.+.
T Consensus 177 -~~~~p-----~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~ 220 (380)
T PRK06176 177 -YYQNP-----LLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIA 220 (380)
T ss_pred -ccCCc-----cccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHH
Confidence 12221 1334577754 599986 4 456777764 56655554
No 309
>PLN02509 cystathionine beta-lyase
Probab=99.67 E-value=3.8e-14 Score=143.11 Aligned_cols=235 Identities=18% Similarity=0.197 Sum_probs=148.6
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+....++...+++++++++.+.+.+++++||+.|+.+++.+ . .++|+||+.++.|++.........
T Consensus 127 Y~r~gnpt~~aLE~~lA~leg~e~ai~~~SG~aAi~~il~l-l-----------~~GD~VI~~~~~y~~t~~ll~~~l-- 192 (464)
T PLN02509 127 YTRSGNPTRDALESLLAKLDKADRAFCFTSGMAALSAVTHL-I-----------KNGEEIVAGDDVYGGSDRLLSQVV-- 192 (464)
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCEEEEeCcHHHHHHHHHHH-h-----------CCCCEEEEcCCchhhHHHHHHHHH--
Confidence 34445677999999999999988888999999988655542 2 168999999999976542211100
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
......+.+++..|++++++++++ ++++|++|..++..|.+.+ +++|.++|++||+++|+|+++.. +
T Consensus 193 -------~~~G~~v~~vd~~d~e~l~~ai~~-~TklV~lesPsNPtG~i~D----l~~I~~lAk~~g~~lIVD~A~a~-~ 259 (464)
T PLN02509 193 -------PRSGVVVKRVNTTNLDEVAAAIGP-QTKLVWLESPTNPRQQISD----IRKIAEMAHAQGALVLVDNSIMS-P 259 (464)
T ss_pred -------HHCCeEEEEeCCCCHHHHHHhCCc-CCeEEEEECCCCCCCCHHH----HHHHHHHHHHcCCEEEEECCccc-c
Confidence 000122334555689999999975 4567777766666665543 99999999999999999999752 2
Q ss_pred CCCccccccccCCcccEEE--ecccCCC-c-cceeeEEeC-HHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHH
Q 012368 294 RTGYLWAHEHYGIFPDIMT--LAKPLAG-G-LPIGAALVT-EKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFL 368 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~t--~sK~lg~-G-~~iG~v~~~-~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~ 368 (465)
..+.. .+...|+++ ++|+++| | .-.|+++++ +.+.+.+...........+|..++.++..|+.+ +..+
T Consensus 260 ~~~~p-----l~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~tL--~~R~ 332 (464)
T PLN02509 260 VLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTM--ALRI 332 (464)
T ss_pred ccCCh-----hhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhhhhH--HHHH
Confidence 22221 123457764 5699986 4 446777764 444333321111111224677777777777654 2345
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCce------------------eeeccceEEEEEe
Q 012368 369 ASVSKKGHYFKETLKQKLARNPHVK------------------DVRGLGLIIGIEF 406 (465)
Q Consensus 369 ~~~~~~~~~l~~~l~~~~~~~~~~~------------------~~~~~g~~~~i~~ 406 (465)
++..++..++.+.|+ .+|.+. ...+.|.++.+++
T Consensus 333 ~r~~~nA~~la~~L~----~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~ 384 (464)
T PLN02509 333 EKQQENARKIAMYLS----SHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFIT 384 (464)
T ss_pred HHHHHHHHHHHHHHh----cCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEe
Confidence 555566666555554 344221 1246688999988
No 310
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.67 E-value=1.2e-13 Score=138.75 Aligned_cols=327 Identities=12% Similarity=0.016 Sum_probs=193.6
Q ss_pred CCHHHHHHHHHHHhhc-ccc-cCCCCCHHHHHHHHHHHhhcC-C---CeEEe--cCCHHHHHHHHHHHHHHHhhhc--CC
Q 012368 115 GDADWIKAVVDQANVL-THV-SNMYYSIPQIELAKRLVACSF-A---DRVFF--SNTGTEANEAAIKFARKFQRHS--NP 184 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~-~~~-~~~~~~~~~~~la~~l~~~~~-~---~~v~~--~~sG~eA~~~al~~a~~~t~~~--~~ 184 (465)
.+|++.+++...+... .+. ..+......++..+++++.++ . +++.+ |+||||||..|+..++...... ..
T Consensus 53 ~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~ 132 (431)
T TIGR01788 53 MEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAA 132 (431)
T ss_pred CCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5788999998887642 221 111122446778888888887 3 35665 7999999999998876432100 00
Q ss_pred CCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCC-ceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCccc
Q 012368 185 DSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPG-VNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYS 263 (465)
Q Consensus 185 ~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~ 263 (465)
.. ......|+.+..-|.+...+....+-.. ...+..++ ... |+++|+++|++ ++.+|++.-.+++.|.+.
T Consensus 133 g~-~~~~~~ii~s~~~H~sv~ka~~~lg~~v---~~i~~d~~~~~v----d~~~L~~~i~~-~t~lV~~t~g~t~tG~id 203 (431)
T TIGR01788 133 GK-PTDKPNLVMGSNVQVCWEKFARYFDVEL---REVPMDPGRYVI----DPEQVVEAVDE-NTIGVVCILGTTYTGEYE 203 (431)
T ss_pred CC-CCCCcEEEEcCcchHHHHHHHHHcCcee---EEEecCCCceee----CHHHHHHHHhh-CCeEEEEEeCCCCCcccC
Confidence 00 0012355555665655544332222111 11122111 111 88999999975 467888888888889888
Q ss_pred CCHHHHHHHHHHHHHh------CCEEEEeccccCCCC---CCc-cccccccCCcccEEEec--ccCCCccceeeEEeCHH
Q 012368 264 ATKEFLQFLRDACDDA------GALLVFDEVQCGLGR---TGY-LWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEK 331 (465)
Q Consensus 264 ~~~~~l~~l~~l~~~~------g~llI~DEv~~g~gr---~g~-~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~ 331 (465)
| +++|.++|+++ |+++++|-+|.|+-. .++ .+.+. ....|.+++| |.+.+...+|+++.++.
T Consensus 204 p----i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~--~~~~DSis~s~HK~~~~P~g~G~l~~r~~ 277 (431)
T TIGR01788 204 D----VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR--LPRVKSINVSGHKYGLVYPGVGWVIWRDE 277 (431)
T ss_pred C----HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC--CCCceEEEECchhccCCCCCcEEEEEeCh
Confidence 7 99999999999 999999999986421 122 11111 1246778887 77656678899988754
Q ss_pred --HHhhccCC--CCc-----CCCCChH--HHHHHHHHHHHHhcCch---HHHHHHHHHHHHHHHHHHHHHcCCCceeee-
Q 012368 332 --VASAINYG--DHG-----STFAGSP--LVCNAAIAVLDKISNPA---FLASVSKKGHYFKETLKQKLARNPHVKDVR- 396 (465)
Q Consensus 332 --i~~~~~~~--~~~-----~t~~~~~--~~~~aa~a~L~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~- 396 (465)
+.+.+... ..+ .++.++. ....+....|..+...+ ..++..++.+++.+.|++ .|.+..+.
T Consensus 278 ~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~----~~~~el~~~ 353 (431)
T TIGR01788 278 EALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAK----LGPFEIISD 353 (431)
T ss_pred HHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHh----CCCEEEeeC
Confidence 32332110 111 1222221 12233444555444333 344444555555555544 45332222
Q ss_pred -ccceEEEEEec------CChHHHHHHHHHCCceEe----ecCC--CCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 397 -GLGLIIGIEFD------VSATPVVDACRDSGLLVL----TAGK--GNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 397 -~~g~~~~i~~~------~~~~~~~~~l~~~Gv~v~----~~~~--~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
....++.|.+. .+..++.+.|.++|+.+. |... ..++|+.+...++++.++++++.|++++.++
T Consensus 354 ~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 354 GSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred CCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 23455555552 244678999999998642 2211 1458998877789999999999999988765
No 311
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.66 E-value=1.8e-14 Score=145.13 Aligned_cols=164 Identities=20% Similarity=0.164 Sum_probs=116.7
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+....++....|++.|+++.+.+..++++||++|+..++..+.. ++++|++.++.|++.........
T Consensus 58 y~r~~~p~~~~Le~~lA~leg~~~al~~~sG~~Ai~~al~~ll~-----------~GD~Vlv~~~~y~~t~~~~~~~~-- 124 (431)
T PRK08248 58 YTRIMNPTTDVFEKRIAALEGGIGALAVSSGQAAITYSILNIAS-----------AGDEIVSSSSLYGGTYNLFAHTL-- 124 (431)
T ss_pred eECCCCchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC-----------CCCEEEEccCchhhHHHHHHHHH--
Confidence 44556777889999999999988899999999999999876542 68999999998876542221100
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
......+.+++..|++++++++++ ++++|+++..++..|.+.+ +++|.++|+++|+++|+|+++.. +
T Consensus 125 -------~~~Gv~v~~vd~~d~e~l~~ai~~-~tklV~l~sp~NPtG~v~d----i~~I~~la~~~gi~vIvD~t~a~-~ 191 (431)
T PRK08248 125 -------PKLGITVKFVDPSDPENFEAAITD-KTKALFAETIGNPKGDVLD----IEAVAAIAHEHGIPLIVDNTFAS-P 191 (431)
T ss_pred -------HhCCEEEEEECCCCHHHHHHhcCC-CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEeCCCCc-c
Confidence 011233456666789999999975 4667777655555566655 88999999999999999999752 1
Q ss_pred CCCccccccccCCcccEE--EecccCCC-ccceeeEEe
Q 012368 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPIGAALV 328 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~--t~sK~lg~-G~~iG~v~~ 328 (465)
.. ........|++ +++|.++| |.++|++++
T Consensus 192 ~~-----~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~ 224 (431)
T PRK08248 192 YL-----LRPIEHGADIVVHSATKFIGGHGTSIGGVIV 224 (431)
T ss_pred cc-----CChhHcCCCEEEEcCccccCCCCCceEEEEE
Confidence 11 11112335666 46699997 778877765
No 312
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.65 E-value=3e-14 Score=140.91 Aligned_cols=239 Identities=14% Similarity=0.073 Sum_probs=160.0
Q ss_pred cccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCcccccccc
Q 012368 132 HVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALT 211 (465)
Q Consensus 132 ~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~ 211 (465)
+.+.+..++....|+++|+++.+.+..++++||+.|+..++..... ++++||+.+..|++.........
T Consensus 54 ~~YsR~~nPt~~~le~~la~LEg~~~a~~~~SGmaAi~~~~~~ll~-----------~GD~Vv~~~~~Yg~t~~l~~~~l 122 (395)
T PRK08114 54 LFYGRRGTLTHFSLQEAMCELEGGAGCALYPCGAAAVANAILAFVE-----------QGDHVLMTGTAYEPTQDFCSKIL 122 (395)
T ss_pred ccccCCCChhHHHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHHHcC-----------CCCEEEEeCCCcHHHHHHHHHHH
Confidence 3456677888999999999999988999999999999998875541 68999999888866653321100
Q ss_pred CCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC--CEEEEeccc
Q 012368 212 SKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAG--ALLVFDEVQ 289 (465)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g--~llI~DEv~ 289 (465)
......+.+++..|.+++++++++ ++++|++|...+..|.+.+ +++|+++|+++| +++|+|.++
T Consensus 123 ---------~~~Gi~v~~vd~~d~~~l~~~l~~-~TrlV~~EtpsNp~~~v~D----I~~Ia~ia~~~g~g~~lvVDnT~ 188 (395)
T PRK08114 123 ---------SKLGVTTTWFDPLIGADIAKLIQP-NTKVVFLESPGSITMEVHD----VPAIVAAVRSVNPDAVIMIDNTW 188 (395)
T ss_pred ---------HhcCcEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCCEeec----HHHHHHHHHHhCCCCEEEEECCC
Confidence 112234556666789999999975 5789999998888888777 999999999985 999999997
Q ss_pred cCCCCCCccccccccCCcccEEEe--cccCCC-c-cceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCc
Q 012368 290 CGLGRTGYLWAHEHYGIFPDIMTL--AKPLAG-G-LPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNP 365 (465)
Q Consensus 290 ~g~gr~g~~~~~~~~~~~pdi~t~--sK~lg~-G-~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~ 365 (465)
.. +. .+.......|+++. .|+++| | .-.|.++.++++.+.+........-..+|..+......|+.+ +
T Consensus 189 a~----p~--~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL--~ 260 (395)
T PRK08114 189 AA----GV--LFKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRGLRTL--G 260 (395)
T ss_pred cc----cc--ccCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHcCCCcH--H
Confidence 52 21 23334445787765 599987 4 778888878776555532111111234555555444333322 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCce------------------eeeccceEEEEEec
Q 012368 366 AFLASVSKKGHYFKETLKQKLARNPHVK------------------DVRGLGLIIGIEFD 407 (465)
Q Consensus 366 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~------------------~~~~~g~~~~i~~~ 407 (465)
-.+++..++...+.+.|+ .+|.+. ...+.|.++.+++.
T Consensus 261 lR~~~~~~na~~va~~L~----~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~ 316 (395)
T PRK08114 261 VRLRQHEESSLKVAEWLA----EHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLK 316 (395)
T ss_pred HHHHHHHHHHHHHHHHHH----cCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEec
Confidence 223444445555444443 444222 12467889999984
No 313
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.65 E-value=3.2e-14 Score=140.43 Aligned_cols=286 Identities=21% Similarity=0.231 Sum_probs=172.7
Q ss_pred cccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCcccccccc
Q 012368 132 HVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALT 211 (465)
Q Consensus 132 ~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~ 211 (465)
+.+.++.++....|+++|++..+.+.++.++||..|+..++..+.. ++++||+....|++.........
T Consensus 47 ~~Y~R~gnPt~~~le~~la~Le~g~~a~~~~SGmaAi~~~l~~ll~-----------~Gd~iv~~~~~Y~~t~~~~~~~l 115 (386)
T PF01053_consen 47 YIYSRYGNPTVRALEQRLAALEGGEDALLFSSGMAAISAALLALLK-----------PGDHIVASDDLYGGTYRLLEELL 115 (386)
T ss_dssp CSBTTTC-HHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHHHS------------TTBEEEEESSSSHHHHHHHHHCH
T ss_pred cceeccccccHHHHHHHHHHhhcccceeeccchHHHHHHHHHhhcc-----------cCCceEecCCccCcchhhhhhhh
Confidence 4456778888999999999999989999999999999998886653 68999999999977653322111
Q ss_pred CCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC-CEEEEecccc
Q 012368 212 SKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAG-ALLVFDEVQC 290 (465)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g-~llI~DEv~~ 290 (465)
......+.+++..|++++++++++ ++++|++|+..+....++. +++|+++|+++| +++|+|....
T Consensus 116 ---------~~~gv~v~~~d~~d~~~l~~~l~~-~t~~v~~EspsNP~l~v~D----l~~i~~~a~~~g~~~~vVDnT~a 181 (386)
T PF01053_consen 116 ---------PRFGVEVTFVDPTDLEALEAALRP-NTKLVFLESPSNPTLEVPD----LEAIAKLAKEHGDILVVVDNTFA 181 (386)
T ss_dssp ---------HHTTSEEEEESTTSHHHHHHHHCT-TEEEEEEESSBTTTTB-------HHHHHHHHHHTTT-EEEEECTTT
T ss_pred ---------cccCcEEEEeCchhHHHHHhhccc-cceEEEEEcCCCccccccc----HHHHHHHHHHhCCceEEeecccc
Confidence 112234567777899999999986 7899999997666554444 999999999998 9999999764
Q ss_pred CCCCCCccccccccCCcccEE--EecccCCC-c-cceeeEEeCH--HHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcC
Q 012368 291 GLGRTGYLWAHEHYGIFPDIM--TLAKPLAG-G-LPIGAALVTE--KVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN 364 (465)
Q Consensus 291 g~gr~g~~~~~~~~~~~pdi~--t~sK~lg~-G-~~iG~v~~~~--~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~ 364 (465)
.. ..+..+....|++ +.+|.++| | .-.|+++++. ++++.+...........+|..+......|+.+
T Consensus 182 tp------~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~Tl-- 253 (386)
T PF01053_consen 182 TP------YNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLRTL-- 253 (386)
T ss_dssp HT------TTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTTH--
T ss_pred ce------eeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCCcH--
Confidence 22 1222233335666 56799987 4 6678888654 67665542111111123444444434333322
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHcCCCceee------------------eccceEEEEEecCCh---HHHHHHHHH--CC
Q 012368 365 PAFLASVSKKGHYFKETLKQKLARNPHVKDV------------------RGLGLIIGIEFDVSA---TPVVDACRD--SG 421 (465)
Q Consensus 365 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~------------------~~~g~~~~i~~~~~~---~~~~~~l~~--~G 421 (465)
+-.+++..++...+.+ .++.+|.+..| .+.|.++.|++.... .+|.+.|.= .|
T Consensus 254 ~~R~~~~~~nA~~lA~----~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~l~~~~ 329 (386)
T PF01053_consen 254 PLRMERQNENAEALAE----FLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALKLFSIA 329 (386)
T ss_dssp HHHHHHHHHHHHHHHH----HHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-SSSEES
T ss_pred HHHHHHHHHHHHHHHH----HHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhhhHhhh
Confidence 2234444455544444 44556644322 366779999994332 344444421 11
Q ss_pred ce-------E-eec---------------C-CCCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 422 LL-------V-LTA---------------G-KGNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 422 v~-------v-~~~---------------~-~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
.- + .|. | .++.+|+++.+ |+.+.+++.|+++|+
T Consensus 330 ~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl----Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 330 PSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL----EDPDDLIADLEQALE 386 (386)
T ss_dssp SS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S----S-HHHHHHHHHHHHH
T ss_pred hhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEecc----CCHHHHHHHHHHhcC
Confidence 11 1 111 1 13679998775 456667777777664
No 314
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.65 E-value=3.8e-14 Score=140.86 Aligned_cols=235 Identities=15% Similarity=0.170 Sum_probs=142.3
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+..+.++...+|+++|++..+.+..+++++|+.|+..++.++. ++++||+.++.|.+.........
T Consensus 44 y~r~~~p~~~~Le~~lA~l~g~~~~~~~~sG~aai~~~~~~l~------------~Gd~Viv~~~~y~~~~~~~~~~~-- 109 (377)
T PRK07671 44 YSRTGNPTRAALEELIAVLEGGHAGFAFGSGMAAITAVMMLFS------------SGDHVILTDDVYGGTYRVMTKVL-- 109 (377)
T ss_pred cCCCCChHHHHHHHHHHHHhCCCceEEeCCHHHHHHHHHHHhC------------CCCEEEECCCccchHHHHHHHHH--
Confidence 4556778889999999999987777788889988876654221 68999999999865432211110
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
......+.+++..|++++++++++ ++++|+++..++..|...+ +++|.++|+++|+++|+||+|...
T Consensus 110 -------~~~G~~v~~v~~~d~~~l~~ai~~-~tklV~le~P~NPtg~~~d----l~~I~~la~~~g~~lvvD~a~~~~- 176 (377)
T PRK07671 110 -------NRFGIEHTFVDTSNLEEVEEAIRP-NTKAIYVETPTNPLLKITD----IKKISTIAKEKGLLTIVDNTFMTP- 176 (377)
T ss_pred -------hcCCeEEEEECCCCHHHHHHhcCC-CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCCcc-
Confidence 011123445555689999999975 4556555544444455544 999999999999999999998632
Q ss_pred CCCccccccccCCcccEE--EecccCCC-c-cceeeEEe-CHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHH
Q 012368 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-G-LPIGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFL 368 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~--t~sK~lg~-G-~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~ 368 (465)
..+.. .....|++ +++|+++| + .-.|++++ ++++++.+........-..+|..+..++..++.+ ...+
T Consensus 177 ~~~~p-----~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~tl--~~R~ 249 (377)
T PRK07671 177 YWQSP-----ISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGLKTL--GIRM 249 (377)
T ss_pred ccCCh-----hhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCcChH--HHHH
Confidence 11221 12234666 46799986 2 34565655 5667666643221112223455444444333322 1233
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCce------------------eeeccceEEEEEe
Q 012368 369 ASVSKKGHYFKETLKQKLARNPHVK------------------DVRGLGLIIGIEF 406 (465)
Q Consensus 369 ~~~~~~~~~l~~~l~~~~~~~~~~~------------------~~~~~g~~~~i~~ 406 (465)
++..++...+.+.|+ ++|.+. ...|.|.++.+++
T Consensus 250 ~~~~~na~~la~~L~----~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~ 301 (377)
T PRK07671 250 EEHETNSRAIAEFLN----NHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDV 301 (377)
T ss_pred HHHHHHHHHHHHHHH----cCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEe
Confidence 444455555554444 333221 1246788999998
No 315
>PRK02769 histidine decarboxylase; Provisional
Probab=99.65 E-value=2.6e-13 Score=134.41 Aligned_cols=285 Identities=13% Similarity=0.133 Sum_probs=177.7
Q ss_pred HHHHHHHHHHhhcC--CCe--EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCc
Q 012368 141 PQIELAKRLVACSF--ADR--VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHY 216 (465)
Q Consensus 141 ~~~~la~~l~~~~~--~~~--v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~ 216 (465)
...+..+++++.++ .++ .+||+||||+|..++..++.+. +++.|+ .+..-|.+...+...-+....
T Consensus 66 ~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~---------~~~~ii-~s~~~H~Sv~ka~~~lg~~~~ 135 (380)
T PRK02769 66 FERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELF---------PDGTLY-YSKDTHYSVSKIARLLRIKSR 135 (380)
T ss_pred HHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhC---------CCcEEE-eCCCceehHHHHHHHcCCCCc
Confidence 35677788888887 234 4899999999999998888643 344444 445555555444332222211
Q ss_pred CCCCCCCCCCceEeeCCCHHHHHhhcCCC--CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC---CEEEEeccccC
Q 012368 217 RSPFEPVMPGVNFVEYGNIEATRKLIQPG--KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAG---ALLVFDEVQCG 291 (465)
Q Consensus 217 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g---~llI~DEv~~g 291 (465)
.. +..+... -|+++|+++++++ .+.+|++...++..|.+.| +++|.++|++|| +++++|-+|.+
T Consensus 136 ~V---~~~~~g~----id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp----i~~I~~i~~~~g~~~~~lHVDaA~gg 204 (380)
T PRK02769 136 VI---TSLPNGE----IDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN----IKEIQEILKKIGIDDYYIHADAALSG 204 (380)
T ss_pred ee---ccCCCCc----CcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC----HHHHHHHHHHhCCCceEEEEEecccc
Confidence 11 1111111 2899999999743 4677888888888888877 999999999998 69999999986
Q ss_pred CCCCCc---cccccccCCcccEEEec--ccCCCccceeeEEeCHHHHhhccCC-----CCcCCCCC--hHHHHHHHHHHH
Q 012368 292 LGRTGY---LWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAINYG-----DHGSTFAG--SPLVCNAAIAVL 359 (465)
Q Consensus 292 ~gr~g~---~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~~~-----~~~~t~~~--~~~~~~aa~a~L 359 (465)
+ ..-. ...++... ..|.+++| |.+++..++|+++.+++..+.+.+. ....|+.+ |..+.++..++|
T Consensus 205 ~-~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL 282 (380)
T PRK02769 205 M-ILPFVNNPPPFSFAD-GIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAI 282 (380)
T ss_pred e-eecccCccccCCccC-CCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHH
Confidence 4 1110 00111111 57888887 8777678999999998777665321 01112222 335566667777
Q ss_pred HHhcCch---HHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCChHHHHHHHHHCCceEeecCCCCEEEEe
Q 012368 360 DKISNPA---FLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLV 436 (465)
Q Consensus 360 ~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~ 436 (465)
+.+..++ ..++..++.+++.++|++ .+......+..+.+.+. .+..++. +|..+.+.+ +.+|+.
T Consensus 283 ~~lg~~G~~~~~~~~~~la~~l~~~L~~----~g~~~~~~p~~~~v~f~--~~~~~~~-----~~w~l~~~~--~~~hi~ 349 (380)
T PRK02769 283 RSLGSKGLRQRVQHCLDMAQYAVDRLQA----NGIPAWRNPNSITVVFP--CPSERIW-----KKWHLATSG--NQAHII 349 (380)
T ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHh----CCCEEEcCCCceEEEEc--CCCHHHH-----hCeeEcccC--CEEEEE
Confidence 7765544 445555566666666644 23222222333333333 2322322 566665543 578888
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 437 PPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 437 ~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
+...++++.+|++++.|...+....
T Consensus 350 ~~~~~~~~~~~~f~~dl~~~~~~~~ 374 (380)
T PRK02769 350 TMPHHNKQQIDSLIDELIFDLKNPN 374 (380)
T ss_pred ECCCCCHHHHHHHHHHHHHHHhccc
Confidence 8888899999999999988876543
No 316
>PLN03032 serine decarboxylase; Provisional
Probab=99.64 E-value=2e-13 Score=134.34 Aligned_cols=279 Identities=17% Similarity=0.160 Sum_probs=172.8
Q ss_pred HHHHHHHHHhhcC--CCeE--EecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcC
Q 012368 142 QIELAKRLVACSF--ADRV--FFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYR 217 (465)
Q Consensus 142 ~~~la~~l~~~~~--~~~v--~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 217 (465)
..++.+++++.++ .+.+ +||+||||||..|+..++.+. ++ .+++.+..-|-+..-+....+...
T Consensus 68 e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~---------~~-~~vi~s~~~H~Sv~kaa~~lg~~~-- 135 (374)
T PLN03032 68 EVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVF---------PD-GILYASRESHYSVFKAARMYRMEA-- 135 (374)
T ss_pred HHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhC---------CC-cEEEeCCCceeHHHHHHHHcCCCC--
Confidence 6678888888887 4555 999999999999999988642 12 367777777876655543322211
Q ss_pred CCCCCCCCCceEeeCCCHHHHHhhcCCC--CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC-----CEEEEecccc
Q 012368 218 SPFEPVMPGVNFVEYGNIEATRKLIQPG--KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAG-----ALLVFDEVQC 290 (465)
Q Consensus 218 ~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g-----~llI~DEv~~ 290 (465)
...|...... -|+++|+++|+++ .+.+|++.-.+++.|.+.| +++|.++|++|| +++++|-++.
T Consensus 136 -~~V~~d~~g~----id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp----i~eI~~i~~~~g~~~~~~~lHvDaA~g 206 (374)
T PLN03032 136 -VKVPTLPSGE----IDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD----LDRILRILKELGYTEDRFYIHCDGALF 206 (374)
T ss_pred -eEeeeCCCCc----CcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC----HHHHHHHHHHhCCCCCCeeEEEEccch
Confidence 0112111111 1899999999742 4667777777777888876 999999999997 5899999987
Q ss_pred CCCCCC---ccccccccCCcccEEEec--ccCCCccceeeEEeCHHHHhhccCC-----CCcCCCCCh--HHHHHHHHHH
Q 012368 291 GLGRTG---YLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAINYG-----DHGSTFAGS--PLVCNAAIAV 358 (465)
Q Consensus 291 g~gr~g---~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~~~-----~~~~t~~~~--~~~~~aa~a~ 358 (465)
|+ ... ....++ +....|.++++ |.++...++|+++.+++.++.+... ....|..++ ....++..++
T Consensus 207 g~-~~p~~~~~~~~~-~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~ 284 (374)
T PLN03032 207 GL-MMPFVSRAPEVT-FRKPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYT 284 (374)
T ss_pred hh-hhhccCCCcccC-CCcCCcEEEECcccccCCCcCeEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHH
Confidence 63 111 000011 11247888877 7666578999999998776655321 011233333 3455666677
Q ss_pred HHHhcCchH---HHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCChHHHHHHHHHCCceEeecCCCCEEEE
Q 012368 359 LDKISNPAF---LASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRL 435 (465)
Q Consensus 359 L~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi 435 (465)
|+.+..+.+ .++..++.+++.+.|++. +......+..+.+.+..+ .... ..+|..+.+.. +.+++
T Consensus 285 l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~----~~~~~~~p~~~~V~f~~~-~~~~-----~~~~w~l~~~~--~~~hi 352 (374)
T PLN03032 285 LRRKGYRGIKRDVQHCMRNAHYLKDRLTEA----GLTCRLNELSSTVVFERP-MDEA-----FIKKWQLACEG--DIAHV 352 (374)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCcEEECCCceEEEEcCC-CcHh-----HhheeeecccC--CEEEE
Confidence 777766554 444555666666666552 322222333333333322 1111 23566555432 57888
Q ss_pred ecCCCCcHHHHHHHHHHHHH
Q 012368 436 VPPLIISEQELDQAVEILCK 455 (465)
Q Consensus 436 ~~~~~~t~e~i~~~l~~l~~ 455 (465)
.+...++++.+|++++-|++
T Consensus 353 ~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 353 VVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred EECCCCCHHHHHHHHHHHhc
Confidence 87777788999999988764
No 317
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.64 E-value=5.3e-14 Score=141.61 Aligned_cols=163 Identities=21% Similarity=0.179 Sum_probs=112.4
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCC
Q 012368 135 NMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE 214 (465)
Q Consensus 135 ~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~ 214 (465)
....++...+|+++|+++.+.+..++++||+.|+..++..+.. ++++||+....|.+.........
T Consensus 64 sr~~~p~~~~Le~~lA~l~g~~~av~~sSG~aAi~~al~all~-----------~Gd~Vv~~~~~y~~t~~~~~~~l--- 129 (436)
T PRK07812 64 TRIMNPTQDVVEQRIAALEGGVAALLLASGQAAETFAILNLAG-----------AGDHIVSSPRLYGGTYNLFHYTL--- 129 (436)
T ss_pred cCCCCchHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhC-----------CCCEEEEeCCcchHHHHHHHHHh---
Confidence 4445677889999999999988899999999999999876542 68899988877755332111100
Q ss_pred CcCCCCCCCCCCceEee-CCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 215 HYRSPFEPVMPGVNFVE-YGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 215 ~~~~~~~~~~~~~~~~~-~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
......+.+++ ..|++++++++++ ++++|++|.+.++.|.+.+ +++|.++|++||+++|+|+++.. +
T Consensus 130 ------~~~Gi~v~~vdd~~d~e~l~~ai~~-~tklV~ie~~sNp~G~v~D----l~~I~~la~~~gi~liVD~t~a~-~ 197 (436)
T PRK07812 130 ------PKLGIEVSFVEDPDDLDAWRAAVRP-NTKAFFAETISNPQIDVLD----IPGVAEVAHEAGVPLIVDNTIAT-P 197 (436)
T ss_pred ------hcCeEEEEEECCCCCHHHHHHhCCC-CCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcc-c
Confidence 00112233342 3489999999975 5778888888777887776 99999999999999999998752 1
Q ss_pred CCCccccccccCCcccEE--EecccCCC-ccceeeEEe
Q 012368 294 RTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPIGAALV 328 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~--t~sK~lg~-G~~iG~v~~ 328 (465)
.. ........|++ +++|.++| |--+|.++.
T Consensus 198 ~~-----~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv 230 (436)
T PRK07812 198 YL-----IRPLEHGADIVVHSATKYLGGHGTAIAGVIV 230 (436)
T ss_pred cc-----CCchhcCCCEEEEecccccCCCCCeEEEEEE
Confidence 11 11112335665 56799986 533444433
No 318
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.62 E-value=1.9e-13 Score=137.77 Aligned_cols=164 Identities=20% Similarity=0.178 Sum_probs=116.9
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+....++...+++++++++.+.+.+++++||++|+.+++..... ++++||+....|++........-
T Consensus 58 y~R~~~p~~~~le~~lA~l~g~~~av~~sSGt~Al~~al~~ll~-----------~Gd~Vi~~~~~y~~t~~~~~~~l-- 124 (433)
T PRK08134 58 YSRISNPTVAVLEERVAALEGGVGAIATASGQAALHLAIATLMG-----------AGSHIVASSALYGGSHNLLHYTL-- 124 (433)
T ss_pred eecCcChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCccHHHHHHHHHHH--
Confidence 44556677899999999999977789999999999999886541 58899999988876543221100
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
......+.+++.+|+++++++|++ ++++|+++...+..|.+.+ +++|.++|++||+++|+|.++.. +
T Consensus 125 -------~~~Gi~v~~vd~~d~~~l~~~i~~-~TklV~~e~~~np~g~v~D----i~~I~~la~~~gi~livD~t~a~-~ 191 (433)
T PRK08134 125 -------RRFGIETTFVKPGDIDGWRAAIRP-NTRLLFGETLGNPGLEVLD----IPTVAAIAHEAGVPLLVDSTFTT-P 191 (433)
T ss_pred -------hhCCeEEEEECCCCHHHHHHhcCC-CCeEEEEECCCcccCcccC----HHHHHHHHHHcCCEEEEECCCcc-c
Confidence 011233456666689999999985 5678888887666677766 99999999999999999999852 1
Q ss_pred CCCccccccccCCcccEEEec--ccCCC-ccceeeEEe
Q 012368 294 RTGYLWAHEHYGIFPDIMTLA--KPLAG-GLPIGAALV 328 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~t~s--K~lg~-G~~iG~v~~ 328 (465)
.. ........|++++| |.++| |-.+|.++.
T Consensus 192 ~~-----~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 192 YL-----LRPFEHGADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred cc-----CCchhcCCCEEEeccccccCCCCCceEEEEE
Confidence 11 11123446777655 99986 544554443
No 319
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.62 E-value=1.1e-13 Score=137.06 Aligned_cols=308 Identities=14% Similarity=0.070 Sum_probs=176.0
Q ss_pred CCHHHHHHHHHHHhhc---ccccCCCCCHHHHHHHHHHHhhcCC---CeEEec-CCHHHHHHHHHHHHHHHhhhcCCCCC
Q 012368 115 GDADWIKAVVDQANVL---THVSNMYYSIPQIELAKRLVACSFA---DRVFFS-NTGTEANEAAIKFARKFQRHSNPDSK 187 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~---~~~~~~~~~~~~~~la~~l~~~~~~---~~v~~~-~sG~eA~~~al~~a~~~t~~~~~~~~ 187 (465)
-+|+|++|+.+..... .|.. .-......+..+.+++.++. .+|+|+ +|||.+++.++.....
T Consensus 14 ~~~~v~~a~~~~~~~~~~~~hr~-~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~---------- 82 (361)
T TIGR01366 14 VRLEQLQALTTTAASLFGTSHRQ-APVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIE---------- 82 (361)
T ss_pred CCHHHHHHHHhcCccccccCcCC-hHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhccc----------
Confidence 4578888876542111 1111 11123366778888888872 368875 6799999999875531
Q ss_pred CCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHH
Q 012368 188 EPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKE 267 (465)
Q Consensus 188 ~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~ 267 (465)
++.+++. .+.+|....-.+... +....+..++....+.++..+. .++++|.+..+.+..|++.|
T Consensus 83 --~~~l~i~-~G~~~~~~~~~a~~~---------~~~~~~~~~~~~~~~~~~~~~~-~~~~lV~~~h~et~tG~~~p--- 146 (361)
T TIGR01366 83 --KKSLHLS-FGEFSSKFAKAVKLA---------PWLGEPIIVTADPGSAPEPQAD-PGVDVIAWAHNETSTGVAVP--- 146 (361)
T ss_pred --ccccEEe-cCHHHHHHHHHHHhh---------hccCCceEEecCCCCCCCCccC-CCCCEEEEcccCCccceecc---
Confidence 2223333 343343222111100 0000122222211123333333 36788988888888888876
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccCCCccceeeEEeCHHHHhhccCCCC----
Q 012368 268 FLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAINYGDH---- 341 (465)
Q Consensus 268 ~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~~~~~---- 341 (465)
+++| ++++|+++|+|-+++ +| +.....+ . .|++++| |++++--.++.+++++++++.+.+...
T Consensus 147 -i~~I---~~~~g~~~iVDavqs-~g--~~~idv~--~--~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~ 215 (361)
T TIGR01366 147 -VRRP---EGSDDALVVIDATSG-AG--GLPVDIA--E--TDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRW 215 (361)
T ss_pred -cccc---cccCCCeEEEEcCcc-cc--CCCCCHH--H--CCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCC
Confidence 5555 689999999999997 43 2222222 2 5888776 988752125666778887766542110
Q ss_pred ----------------cCCCCChHH-HHHHHHHHHHHhcCc----hHHHHHHHHHHHHHHHHHHHHHcCCCceeee-ccc
Q 012368 342 ----------------GSTFAGSPL-VCNAAIAVLDKISNP----AFLASVSKKGHYFKETLKQKLARNPHVKDVR-GLG 399 (465)
Q Consensus 342 ----------------~~t~~~~~~-~~~aa~a~L~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~g 399 (465)
..|.+..++ ...+..++++.+.+. ...++.+++.+++++.+.++....+...... ...
T Consensus 216 ~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~ 295 (361)
T TIGR01366 216 VPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQ 295 (361)
T ss_pred CchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhccc
Confidence 133343333 344666777776543 2345555555566655555421111111100 011
Q ss_pred eEEEEEe--cCChHHHHHHHHHCCceEeecC---CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 400 LIIGIEF--DVSATPVVDACRDSGLLVLTAG---KGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 400 ~~~~i~~--~~~~~~~~~~l~~~Gv~v~~~~---~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
....+.+ +.+..++.+.|.++||.+.++. .++++|++.....|.+|+++++++|+++++++
T Consensus 296 ~v~~v~~~~g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 296 VVGTIDFVDDIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred ceEEEECCCccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 1122333 2466788899999999987642 13679999999999999999999999988753
No 320
>PRK04311 selenocysteine synthase; Provisional
Probab=99.62 E-value=1.1e-12 Score=132.45 Aligned_cols=310 Identities=16% Similarity=0.101 Sum_probs=179.7
Q ss_pred CCHHHHHHHHHHHhhccccc-C---CCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 012368 115 GDADWIKAVVDQANVLTHVS-N---MYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPA 190 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~-~---~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~ 190 (465)
-++++.+++.+.+..+.... . ....+....+++.++++++.+.++++++|+.|+.+++.... ++
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~l~------------~G 165 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGAEDALVVNNNAAAVLLALNALA------------AG 165 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhC------------CC
Confidence 45889999998876542110 0 11123356888999999998889999999999998886432 57
Q ss_pred ceEEEEcCCcc--cCccc---cccccCCCCcCCCCCCCCCCceEeeC---CCHHHHHhhcCCCCeEEEEEccc-CC-CCC
Q 012368 191 TEFVSFTNSFH--GRTMG---ALALTSKEHYRSPFEPVMPGVNFVEY---GNIEATRKLIQPGKTAAVFVEPI-QG-EGG 260 (465)
Q Consensus 191 ~~ii~~~~~yh--g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~le~~l~~~~~a~vi~ep~-~~-~~G 260 (465)
++||+.+..+. |.+.. .+...| ..+.+++. .++++++++++++ +++|+++.. |. ..|
T Consensus 166 deVIvs~~e~~~~ggs~~i~~~~~~~G------------~~l~~v~~~~~t~~~dle~aI~~~-TklV~~vh~sN~~i~G 232 (464)
T PRK04311 166 KEVIVSRGELVEIGGAFRIPDVMRQAG------------ARLVEVGTTNRTHLRDYEQAINEN-TALLLKVHTSNYRIEG 232 (464)
T ss_pred CEEEEcchhhhhcCcchhhHHHHHHCC------------cEEEEECCCCCCCHHHHHHhcCcc-CeEEEEEcCCCccccc
Confidence 88988876433 21111 111111 11222322 3688999999854 566655544 33 123
Q ss_pred --cccCCHHHHHHHHHHHHHhCCEEEEeccccCCC---CC---CccccccccCCcccEEEec--ccCCCccceeeEEeCH
Q 012368 261 --IYSATKEFLQFLRDACDDAGALLVFDEVQCGLG---RT---GYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTE 330 (465)
Q Consensus 261 --~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g---r~---g~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~ 330 (465)
..++ +++|.++|++||+++|+|....-++ .. +.....+......|++++| |.++|. ..|++++++
T Consensus 233 ~~~~~d----l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp-~~G~i~g~~ 307 (464)
T PRK04311 233 FTKEVS----LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP-QAGIIVGKK 307 (464)
T ss_pred cCCcCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC-ceEEEEEcH
Confidence 2334 9999999999999999999421111 11 1111122223457999988 999875 479999999
Q ss_pred HHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcC--chH------------HHHHHHHHHHHHHHHHHHHHcCCC-ceee
Q 012368 331 KVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN--PAF------------LASVSKKGHYFKETLKQKLARNPH-VKDV 395 (465)
Q Consensus 331 ~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~--~~~------------~~~~~~~~~~l~~~l~~~~~~~~~-~~~~ 395 (465)
++++.+........+...-...++..++|....+ +.+ .++..++...+.+.|+..... +. ...+
T Consensus 308 ~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~-~~~~~~~ 386 (464)
T PRK04311 308 ELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGA-AFAVEVV 386 (464)
T ss_pred HHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCC-CeeEEEE
Confidence 9988776322222233334445555555553311 111 245555666666666543210 10 1111
Q ss_pred -----eccceE-------EEEEec---CChHHHHHHHHHC--CceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 396 -----RGLGLI-------IGIEFD---VSATPVVDACRDS--GLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 396 -----~~~g~~-------~~i~~~---~~~~~~~~~l~~~--Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
-|.|.+ +.+.+. ....++.+.|++- .|+.+... +.+.+-+ -+..++|++.++++|.+++.
T Consensus 387 ~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r~~~--~~~~ld~-r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 387 PSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGRIED--GRLLLDL-RTLEEEDEERLAAALLEALN 463 (464)
T ss_pred EccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEEEEC--CEEEEEe-CcCCHHHHHHHHHHHHHHhh
Confidence 122222 223331 3467888888864 35554322 4455543 35688899999999988753
No 321
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.61 E-value=1e-13 Score=138.52 Aligned_cols=296 Identities=11% Similarity=0.056 Sum_probs=170.0
Q ss_pred HHHHHHHHHhhcCCC---eEEecCCHH-HHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccc-cCCCCc
Q 012368 142 QIELAKRLVACSFAD---RVFFSNTGT-EANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALAL-TSKEHY 216 (465)
Q Consensus 142 ~~~la~~l~~~~~~~---~v~~~~sG~-eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~-~~~~~~ 216 (465)
..++++++++.+|.. ..+++++|| .++.+++.+++... .+++.||+..-+ |-.+..++.. +..+.+
T Consensus 107 ~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~--------~~gd~VI~p~~t-h~S~~kAi~~~G~~pv~ 177 (444)
T TIGR03531 107 TNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKR--------PKAKYVIWPRID-QKSCIKAISTAGFEPRV 177 (444)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcC--------CCCCEEEEECcC-hHHHHHHHHHcCCeEEE
Confidence 567788888888844 799999999 68888877665211 136778888776 5444444443 322222
Q ss_pred CCCCCCCCCCceEeeCCCHHHHHhhcCC---CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 217 RSPFEPVMPGVNFVEYGNIEATRKLIQP---GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 217 ~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
.+.. ....... -|+++|+++|++ +.+.+|+..|....+|.. +.+++|.++|++||+++|+|++|....
T Consensus 178 Vd~~-~d~~~~~----iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~----ddL~eIa~la~k~gI~lIvDaAyg~~~ 248 (444)
T TIGR03531 178 IETV-LDGDELT----TDVEDIERAIEEIGPDNILCVLSTTSCFAPRSP----DDIEEIAKICANYDIPHIVNNAYGLQS 248 (444)
T ss_pred eeee-ecCcCCC----cCHHHHHHHHHhccCCCEEEEEEcCCcCCCcch----hCHHHHHHHHHHcCCEEEEECcCcCcC
Confidence 1100 0001111 189999999973 345666666653333332 349999999999999999999997321
Q ss_pred CCCccccccccCC-cccEEEe--cccCCCccceeeEEe-CHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcC--chH
Q 012368 294 RTGYLWAHEHYGI-FPDIMTL--AKPLAGGLPIGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN--PAF 367 (465)
Q Consensus 294 r~g~~~~~~~~~~-~pdi~t~--sK~lg~G~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~--~~~ 367 (465)
..-.......... ..|++++ +|.+......|.++. ++++++.+.....+.. .+..++.+...++....+ +++
T Consensus 249 ~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~y~g~~--~~s~~~~~~~~ll~~G~~g~~~l 326 (444)
T TIGR03531 249 NKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKSYPGRA--SASPSLDVLITLLSLGSKGYLEL 326 (444)
T ss_pred hhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHhccCCC--CChHHHHHHHHHHHhCHHHHHHH
Confidence 0000000011111 2466654 598875222455556 6778777764322222 223455555555543322 456
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCC-ceeeeccceEEEEEec----CChHHHHHHHHHCCce----EeecCC---CC----
Q 012368 368 LASVSKKGHYFKETLKQKLARNPH-VKDVRGLGLIIGIEFD----VSATPVVDACRDSGLL----VLTAGK---GN---- 431 (465)
Q Consensus 368 ~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~g~~~~i~~~----~~~~~~~~~l~~~Gv~----v~~~~~---~~---- 431 (465)
.++..++.+++.+.|.++..+++. +...+....-+++.++ .+...+...|..++|- |.++.. ++
T Consensus 327 i~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~~~~ 406 (444)
T TIGR03531 327 LKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLKGKDPTMLGSMLYSRRVTGPRVVTNGDSKTVGGCEFK 406 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccccccCHHHHHHHHHhCCCCCceeecCCCceEECCEEee
Confidence 667777888888888887766652 2222222222334432 3466777888877662 222210 11
Q ss_pred ------------EEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 432 ------------VVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 432 ------------~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
++-+..+..++++|+|.++++|++++
T Consensus 407 ~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 407 GYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred cccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 12222235579999999999998753
No 322
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.60 E-value=6.6e-13 Score=130.53 Aligned_cols=310 Identities=10% Similarity=0.011 Sum_probs=184.1
Q ss_pred CCHHHHHHHHHHHhhcccc----cCCC--CC---HHHHHHHHHHHhhcC-C--CeEEecCC-HHHHHHHHHHHHHHHhhh
Q 012368 115 GDADWIKAVVDQANVLTHV----SNMY--YS---IPQIELAKRLVACSF-A--DRVFFSNT-GTEANEAAIKFARKFQRH 181 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~----~~~~--~~---~~~~~la~~l~~~~~-~--~~v~~~~s-G~eA~~~al~~a~~~t~~ 181 (465)
.|..|++++.+.+...... .... .. ....++.+.|++.++ + .+|+|++| ||+|+++++.....
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~---- 78 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLA---- 78 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC----
Confidence 3557888888887642211 0001 11 235667778888887 2 35777755 99999999885542
Q ss_pred cCCCCCCCCceEEEEcCCcccCcccccccc-CCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCC
Q 012368 182 SNPDSKEPATEFVSFTNSFHGRTMGALALT-SKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGG 260 (465)
Q Consensus 182 ~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G 260 (465)
+++++++...+..|....-+.-. +..... ...+ ..++.+..++++.....++.+|.+..+-.++|
T Consensus 79 -------~~~~~l~i~~G~fg~r~~~~a~~~g~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~~v~~th~ETstG 144 (349)
T TIGR01364 79 -------EGKVADYIVTGAWSKKAAKEAKKYGVVNVV----ASGK---EGNYTKIPDPSTWEISEDAAYVHYCANETIHG 144 (349)
T ss_pred -------CCCeEEEEECCHHHHHHHHHHHHhCCcEEE----eccc---cCCCCCCCCHHhcCCCCCCCEEEEcCCCCccc
Confidence 46778887777767654222211 110000 0000 01233333333222223677888888777778
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccCCCccceeeEEeCHHHHhhccC
Q 012368 261 IYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAINY 338 (465)
Q Consensus 261 ~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~~ 338 (465)
+..+ ++++.+++++++|-+++ +| +.....+.+ |++++| |++| ...+|++++++++++.+.+
T Consensus 145 v~~~---------~l~~~~~~l~iVDavss-~g--~~~id~~~~----d~~~~ssqK~lg-P~Glg~l~~s~~~~~~~~~ 207 (349)
T TIGR01364 145 VEFR---------ELPDVKNAPLVADMSSN-IL--SRPIDVSKF----GLIYAGAQKNIG-PAGLTVVIVRKDLLGRASR 207 (349)
T ss_pred Eecc---------eecccCCCeEEEEcccc-cc--CccCCHHHc----cEEEEecccccC-CCceEEEEECHHHHhhccc
Confidence 7643 56777899999999987 43 222223332 466665 9886 4458999999998876644
Q ss_pred CC-----------CcCCC-CChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCC-Ccee-e--e-ccceE
Q 012368 339 GD-----------HGSTF-AGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNP-HVKD-V--R-GLGLI 401 (465)
Q Consensus 339 ~~-----------~~~t~-~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~-~--~-~~g~~ 401 (465)
.. ...++ +.|.....+..++|+.+.++.-++.+.++...+.+.+.+.+++.+ .... . . ..+..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v 287 (349)
T TIGR01364 208 ITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMN 287 (349)
T ss_pred CCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeE
Confidence 21 11222 445566677778888775541134455555555555555555554 2111 1 1 12244
Q ss_pred EEEEecC--ChHHHHHHHHHCCceEeecCC-CCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 402 IGIEFDV--SATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 402 ~~i~~~~--~~~~~~~~l~~~Gv~v~~~~~-~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
+.+.++. ...++...+.++|+.+.++.. .+.+|+++....|++||+.+++.|++++++
T Consensus 288 ~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 288 VVFTLGNEELEKRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred EEEecCChhHhHHHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 5565532 125666788899995555432 368999999999999999999999987653
No 323
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.59 E-value=8e-13 Score=143.47 Aligned_cols=334 Identities=13% Similarity=0.084 Sum_probs=192.5
Q ss_pred CEEEecccCcccccCCCCCH-HHHHHHHHHHhhc-ccccCCC-----CCHHHHHHHHHHHhhcC--C-C-eEEecCCHHH
Q 012368 98 REYLDLSSGIAVNALGHGDA-DWIKAVVDQANVL-THVSNMY-----YSIPQIELAKRLVACSF--A-D-RVFFSNTGTE 166 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p-~v~~a~~~~~~~~-~~~~~~~-----~~~~~~~la~~l~~~~~--~-~-~v~~~~sG~e 166 (465)
..|+|..+... .+| .|.+++.+.+... .+....+ .....++.+++++++++ . + .|+||+|+|+
T Consensus 35 ~iYLD~Aatt~------~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~ 108 (805)
T PLN02724 35 VVYLDHAGATL------YSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATA 108 (805)
T ss_pred CEeEeCCCCCC------CCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHH
Confidence 57999876432 344 4445555554432 1111111 12236678888888887 3 3 5899999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCC-------CceEeeCCCHHHHH
Q 012368 167 ANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMP-------GVNFVEYGNIEATR 239 (465)
Q Consensus 167 A~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~d~~~le 239 (465)
|+.++..... + .+++.||+. ..-|........+.........+.+... ....+. .+.++|+
T Consensus 109 alnlva~~l~-~---------~~gd~Iv~t-~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~-~~~~~l~ 176 (805)
T PLN02724 109 ALKLVGETFP-W---------SSESHFCYT-LENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVV-VKSRGLQ 176 (805)
T ss_pred HHHHHHHHCC-C---------CCCCeEEEe-eccccchHHHHHHHHHcCCeEEeccchhccccccccccccc-cchhhhh
Confidence 9998766432 1 146777774 4555554433221100010101111110 000000 0124555
Q ss_pred hhcC---------CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHH---h-----CCEEEEeccccCCCCCCcccccc
Q 012368 240 KLIQ---------PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDD---A-----GALLVFDEVQCGLGRTGYLWAHE 302 (465)
Q Consensus 240 ~~l~---------~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~---~-----g~llI~DEv~~g~gr~g~~~~~~ 302 (465)
+.++ ..++.+|.+..+.+..|.+.| ++.|.++++. + ++++++|-+|+ +|.. ..+
T Consensus 177 ~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~p----i~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~-~g~~----piD 247 (805)
T PLN02724 177 RRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFP----LDLVKLIKDNQHSNFSKSGRWMVLLDAAKG-CGTS----PPD 247 (805)
T ss_pred hhhhhhhccccccCCCcceEEEEccccCCCCcCC----HHHHHHHHHhcccccccCcceEEEeehhhh-cCCC----CCC
Confidence 5431 134578888888888898877 5555444432 2 36899999986 4322 233
Q ss_pred ccCCcccEEEec--ccCCCccceeeEEeCHHHHhhccCCCCcC-C---------C--------------CChHHHHHHHH
Q 012368 303 HYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAINYGDHGS-T---------F--------------AGSPLVCNAAI 356 (465)
Q Consensus 303 ~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~~~~~~~-t---------~--------------~~~~~~~~aa~ 356 (465)
...+.+|.+++| |.+|+...+|++++++++.+.+.+...++ + + +.|.++.++..
T Consensus 248 v~~~~~Dfl~~S~HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~ 327 (805)
T PLN02724 248 LSRYPADFVVVSFYKIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALR 327 (805)
T ss_pred hhhcCCCEEEEecceeccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHH
Confidence 334568999887 98876567899999998877766532211 1 1 23455666666
Q ss_pred HHHHHhcC---chHHHHHHHHHHHHHHHHHHHHHc--CCCceee---------eccceEEEEEec-CC-----hHHHHHH
Q 012368 357 AVLDKISN---PAFLASVSKKGHYFKETLKQKLAR--NPHVKDV---------RGLGLIIGIEFD-VS-----ATPVVDA 416 (465)
Q Consensus 357 a~L~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~---------~~~g~~~~i~~~-~~-----~~~~~~~ 416 (465)
++|+.+.+ +...++.+++.+++.+.|.++... .|.+... ...+.++.|.+. .+ ...+...
T Consensus 328 aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l 407 (805)
T PLN02724 328 HGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKL 407 (805)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHH
Confidence 67766543 556677777788887777765211 1111111 124556666662 22 2334443
Q ss_pred HHHCCceEeecC--------------------------------------CCCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 417 CRDSGLLVLTAG--------------------------------------KGNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 417 l~~~Gv~v~~~~--------------------------------------~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
+.++||.++.+. ..+.+|+++.+..|.+|++++++.|++.+.
T Consensus 408 ~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~ 487 (805)
T PLN02724 408 ASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFV 487 (805)
T ss_pred HHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhh
Confidence 446788886431 016799999999999999999999999764
No 324
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.59 E-value=4.2e-12 Score=128.01 Aligned_cols=303 Identities=16% Similarity=0.089 Sum_probs=174.6
Q ss_pred CCHHHHHHHHHHHhhccccc----CCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 012368 115 GDADWIKAVVDQANVLTHVS----NMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPA 190 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~----~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~ 190 (465)
-++++++++.+.+..+.... ..........+++.++++.+.+..+++++|+.|+.+++..+. ++
T Consensus 93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~~l~------------~G 160 (454)
T TIGR00474 93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAEDALVVNNNAAAVLLALNTLA------------KG 160 (454)
T ss_pred CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhC------------Cc
Confidence 56899999999887643110 011123367899999999997778889999999988885432 58
Q ss_pred ceEEEEcCCc---ccCccc--cccccCCCCcCCCCCCCCCCceEeeC---CCHHHHHhhcCCCCeEEEEEccc-CCC-CC
Q 012368 191 TEFVSFTNSF---HGRTMG--ALALTSKEHYRSPFEPVMPGVNFVEY---GNIEATRKLIQPGKTAAVFVEPI-QGE-GG 260 (465)
Q Consensus 191 ~~ii~~~~~y---hg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~le~~l~~~~~a~vi~ep~-~~~-~G 260 (465)
++||+.+..+ .|.... .+...+ ..+.+++. .|+++++++++++ +++|+++.. |.. .|
T Consensus 161 deVIvs~~e~v~~ggs~~i~~~~~~~G------------~~~~~v~~~~~~~l~dle~aI~~~-T~lv~~~h~sN~~~~G 227 (454)
T TIGR00474 161 KEVIVSRGELVEIGGSFRIPDVMEQSG------------AKLVEVGTTNRTHLKDYEDAITEN-TALLLKVHTSNYRIVG 227 (454)
T ss_pred CEEEECCChhhhhcchhhHHHHHHHcC------------CEEEEeCCCCCCCHHHHHHhcCcC-CEEEEEEccCcccccC
Confidence 8888887664 222111 111111 12223332 4789999999764 556555543 332 34
Q ss_pred --cccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc---------cccccccCCcccEEEec--ccCCCccceeeEE
Q 012368 261 --IYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY---------LWAHEHYGIFPDIMTLA--KPLAGGLPIGAAL 327 (465)
Q Consensus 261 --~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~---------~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~ 327 (465)
..++ +++|.++|++||+++|+|.. +|..+. +..++......|++++| |.++|. ..|+++
T Consensus 228 ~~~~~d----l~~I~~la~~~g~~vivD~~---sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp-~~G~i~ 299 (454)
T TIGR00474 228 FTEEVS----IAELVALGREHGLPVMEDLG---SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP-QAGIIV 299 (454)
T ss_pred CCCCCC----HHHHHHHHHHcCCeEEEECC---CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC-eEEEEE
Confidence 2444 99999999999999999963 222211 11122223457999998 999765 378999
Q ss_pred eCHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCch--H------------HHHHHHHHHHHHHHHHHHHH-cCC--
Q 012368 328 VTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPA--F------------LASVSKKGHYFKETLKQKLA-RNP-- 390 (465)
Q Consensus 328 ~~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~--~------------~~~~~~~~~~l~~~l~~~~~-~~~-- 390 (465)
+++++++.+........+...-+..++..+++.....+. + .++..++...+.+.|++.+. ...
T Consensus 300 g~~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~ 379 (454)
T TIGR00474 300 GKKELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELE 379 (454)
T ss_pred ECHHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEE
Confidence 999988776532211112223334445455554432211 1 23555566666666665321 010
Q ss_pred Ccee--eeccceE-------EEEEe---cCChHHHHHHHHHCC--ceEeecCCCCEEEEecCCCCcHHHHHHHHHHH
Q 012368 391 HVKD--VRGLGLI-------IGIEF---DVSATPVVDACRDSG--LLVLTAGKGNVVRLVPPLIISEQELDQAVEIL 453 (465)
Q Consensus 391 ~~~~--~~~~g~~-------~~i~~---~~~~~~~~~~l~~~G--v~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l 453 (465)
+... .-|.|++ +.+.+ ...+.++.+.|++.. |+.+.. .+.+.+-+- +..++|++.++++|
T Consensus 380 ~~~~~~~~ggg~~p~~~l~~~~v~~~~~~~~~~~l~~~lr~~~~~ii~r~~--~~~~~ld~r-~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 380 IVPGLSQVGGGSLPDERLPSYAVTLTPDGLSAEKLEARLRELPPPIIGRIE--DDRFLLDLR-TLLEDEEELLIEAL 453 (454)
T ss_pred EEEcCCcccCCCCcCCCCCeEEEEEecCCCCHHHHHHHHhcCCCCEEEEEE--CCEEEEEeC-cCCHHHHHHHHHHh
Confidence 0000 0122332 22333 135678888888665 444322 244555433 55778888887765
No 325
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.59 E-value=7.5e-13 Score=133.88 Aligned_cols=293 Identities=18% Similarity=0.170 Sum_probs=170.8
Q ss_pred HHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHH-hhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCC
Q 012368 140 IPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKF-QRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRS 218 (465)
Q Consensus 140 ~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~-t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~ 218 (465)
+...++++.++++++.+.+++++||++|+..|+.++... ....+ ..+++.||+..++|.+....+...+..+.+.
T Consensus 63 ~~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~---~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~v- 138 (438)
T PRK15407 63 RFNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRA---LKPGDEVITVAAGFPTTVNPIIQNGLVPVFV- 138 (438)
T ss_pred hhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccC---CCCCCEEEECCCCcHHHHHHHHHcCCEEEEE-
Confidence 346789999999999889999999999999999866311 00000 0268899999999977765544433322211
Q ss_pred CCCCCCCCceEeeCC-CHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc
Q 012368 219 PFEPVMPGVNFVEYG-NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY 297 (465)
Q Consensus 219 ~~~~~~~~~~~~~~~-d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~ 297 (465)
+..+. .++ |++++++++.+ ++++|++.+..++ . ..+++|.++|++||++||+|++|+ +|-.-.
T Consensus 139 ---dvd~~----~~~id~~~le~~i~~-~tkaVi~~~~~G~---p----~dl~~I~~la~~~gi~vIeDaa~a-~G~~~~ 202 (438)
T PRK15407 139 ---DVELP----TYNIDASLLEAAVSP-KTKAIMIAHTLGN---P----FDLAAVKAFCDKHNLWLIEDNCDA-LGSTYD 202 (438)
T ss_pred ---ecCCC----cCCcCHHHHHHHcCc-CCeEEEEeCCCCC---h----hhHHHHHHHHHHCCCEEEEECccc-hhhhcC
Confidence 11110 112 78999999975 5677777765433 2 238999999999999999999997 432101
Q ss_pred cccccccCCcccEEEec----ccCCCccceeeEEeCH-HHHhhccC----CC----------------------------
Q 012368 298 LWAHEHYGIFPDIMTLA----KPLAGGLPIGAALVTE-KVASAINY----GD---------------------------- 340 (465)
Q Consensus 298 ~~~~~~~~~~pdi~t~s----K~lg~G~~iG~v~~~~-~i~~~~~~----~~---------------------------- 340 (465)
. ...|-.-|+.+|| |.+..|- .|+++.++ ++.+.+.. +.
T Consensus 203 g---~~~G~~gd~~~fSf~~~k~~~~ge-GG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (438)
T PRK15407 203 G---RMTGTFGDIATLSFYPAHHITMGE-GGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYD 278 (438)
T ss_pred C---eeeeccCceEEEeCCCCCCccccC-ceEEEECCHHHHHHHHHHHHhCccccccccccccccccccccccccccccc
Confidence 1 1112223677766 6676442 48888764 44332211 00
Q ss_pred -------CcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeec-cceE--EEEEec---
Q 012368 341 -------HGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRG-LGLI--IGIEFD--- 407 (465)
Q Consensus 341 -------~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~g~~--~~i~~~--- 407 (465)
.+..+..+.+.++.++.-|+.+ ++..++-+++.+++.+.|..+...........+ ...+ +.+.++
T Consensus 279 ~~~~~~~~G~n~rmsel~AAig~~qL~~l--~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 356 (438)
T PRK15407 279 HKYTYSHLGYNLKITDMQAAIGLAQLEKL--PGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDA 356 (438)
T ss_pred ccccccccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcC
Confidence 1122234556666666666654 344555555555655555432100000111111 1222 233332
Q ss_pred -CChHHHHHHHHHCCceEeec-----CC----------------------CCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 408 -VSATPVVDACRDSGLLVLTA-----GK----------------------GNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 408 -~~~~~~~~~l~~~Gv~v~~~-----~~----------------------~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
....++.+.|.++||..... .. ...+-+=+....|++|++..++.|+++++
T Consensus 357 ~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 357 GFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 23578999999999965421 00 01132222344689999999999998874
No 326
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.59 E-value=9.4e-13 Score=120.25 Aligned_cols=278 Identities=20% Similarity=0.202 Sum_probs=175.2
Q ss_pred CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC--
Q 012368 155 ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-- 232 (465)
Q Consensus 155 ~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 232 (465)
.....+..+|+.+.+.|+--... |+|+|+++.-+-.|....-+.- .+..++..++.
T Consensus 68 ~~tf~isgsGh~g~E~al~N~le-----------Pgd~vLv~~~G~wg~ra~D~~~-----------r~ga~V~~v~~~~ 125 (385)
T KOG2862|consen 68 AQTFVISGSGHSGWEAALVNLLE-----------PGDNVLVVSTGTWGQRAADCAR-----------RYGAEVDVVEADI 125 (385)
T ss_pred CceEEEecCCcchHHHHHHhhcC-----------CCCeEEEEEechHHHHHHHHHH-----------hhCceeeEEecCc
Confidence 34567788899999998875552 7899998877655544222110 11122322221
Q ss_pred ---CCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCccc
Q 012368 233 ---GNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPD 309 (465)
Q Consensus 233 ---~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pd 309 (465)
-.+|.+++.+..+++.+|++....+.+|+..+ .++.+.++|++|+++|++|-|-+ +| |..|.++.+++..-
T Consensus 126 G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~---~~~~~g~lc~k~~~lllVD~VaS-lg--gt~F~mDewgVDva 199 (385)
T KOG2862|consen 126 GQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQD---LLAISGELCHKHEALLLVDTVAS-LG--GTEFEMDEWGVDVA 199 (385)
T ss_pred ccCccHHHHHHHHHhcCCceEEEEecCccccccch---HHHHHHHHhhcCCeEEEEechhh-cC--CccceehhhcccEE
Confidence 15899999999888999999998888888654 37778899999999999999987 43 55677888886432
Q ss_pred EEEecccCCCccceeeEEeCHHHHhhccCCCC------------c-----------CCCCChHHHHHHHHHHHHHhcC--
Q 012368 310 IMTLAKPLAGGLPIGAALVTEKVASAINYGDH------------G-----------STFAGSPLVCNAAIAVLDKISN-- 364 (465)
Q Consensus 310 i~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~------------~-----------~t~~~~~~~~~aa~a~L~~~~~-- 364 (465)
...--|++++.-.++-+..++..++.++..+. . ..+..+.....+..++|..+-+
T Consensus 200 ytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeG 279 (385)
T KOG2862|consen 200 YTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEG 279 (385)
T ss_pred EecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHH
Confidence 22233999873334446677777777654311 0 0111233344555666766644
Q ss_pred -chHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEe--cCChHHHHHHHHHCCceEeecCC----CCEEEEec
Q 012368 365 -PAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEF--DVSATPVVDACRDSGLLVLTAGK----GNVVRLVP 437 (465)
Q Consensus 365 -~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~--~~~~~~~~~~l~~~Gv~v~~~~~----~~~lRi~~ 437 (465)
++..++-++.+++++..|+++--+.=.............+.. ..+..++..++..++.....++. +.++||-.
T Consensus 280 L~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl 359 (385)
T KOG2862|consen 280 LENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGL 359 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEE
Confidence 345566667777887777765111101111111222233333 35778899999998655544432 57899864
Q ss_pred -CCCCcHHHHHHHHHHHHHHHHHh
Q 012368 438 -PLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 438 -~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
.-..+.+.|+..++.|+.++.+-
T Consensus 360 ~gcna~~e~i~~v~~ll~~alq~~ 383 (385)
T KOG2862|consen 360 LGCNANVEYIDNVVELLKLALQRK 383 (385)
T ss_pred eeccCCcHHHHHHHHHHHHHHhhc
Confidence 23347788999999998887653
No 327
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.58 E-value=3.1e-13 Score=126.59 Aligned_cols=173 Identities=19% Similarity=0.186 Sum_probs=130.7
Q ss_pred HhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccc
Q 012368 127 ANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMG 206 (465)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~ 206 (465)
++..++.+.+..++....|+++++...|--..+.+.||..|+..|+..+.. ++|.||....-|-|.. .
T Consensus 49 l~~~G~iYsRi~NPT~~vlE~RiAaLEGG~aa~a~aSG~AA~~~ai~~la~-----------aGD~iVss~~LYGGT~-~ 116 (426)
T COG2873 49 LKEPGNIYTRIMNPTTDVLEERIAALEGGVAALAVASGQAAITYAILNLAG-----------AGDNIVSSSKLYGGTY-N 116 (426)
T ss_pred CCcCCceeeeccCchHHHHHHHHHHhhcchhhhhhccchHHHHHHHHHhcc-----------CCCeeEeeccccCchH-H
Confidence 444455567777888899999999998755667889999999998876552 6999999988885543 2
Q ss_pred cccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 012368 207 ALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFD 286 (465)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D 286 (465)
.... .+..+.-.+.++..+|++.++++|++ ++++|++|.+-++++.++. ++.|.++|+++|++||+|
T Consensus 117 lf~~--------tl~~~Gi~v~fvd~~d~~~~~~aI~~-nTkavf~EtigNP~~~v~D----ie~ia~iAh~~gvpliVD 183 (426)
T COG2873 117 LFSH--------TLKRLGIEVRFVDPDDPENFEAAIDE-NTKAVFAETIGNPGLDVLD----IEAIAEIAHRHGVPLIVD 183 (426)
T ss_pred HHHH--------HHHhcCcEEEEeCCCCHHHHHHHhCc-ccceEEEEeccCCCccccC----HHHHHHHHHHcCCcEEEe
Confidence 2221 12234456778888899999999986 6899999999877777765 999999999999999999
Q ss_pred ccccCCCCCCccccccccCCcccEE--EecccCCC-ccceeeEEeCH
Q 012368 287 EVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAG-GLPIGAALVTE 330 (465)
Q Consensus 287 Ev~~g~gr~g~~~~~~~~~~~pdi~--t~sK~lg~-G~~iG~v~~~~ 330 (465)
...+. ++.+.-.+...||+ +.+|.+|| |--+|-++...
T Consensus 184 NT~at------pyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~ 224 (426)
T COG2873 184 NTFAT------PYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDG 224 (426)
T ss_pred cCCCc------ceecchhhcCCCEEEEeecccccCCccccceEEEeC
Confidence 87542 12344444456877 46799998 88887777654
No 328
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.55 E-value=7.5e-13 Score=130.77 Aligned_cols=308 Identities=9% Similarity=-0.013 Sum_probs=185.7
Q ss_pred CCHHHHHHHHHHHhhcc------cccCCCCC---HHHHHHHHHHHhhcC-CC--eE-EecCCHHHHHHHHHHHHHHHhhh
Q 012368 115 GDADWIKAVVDQANVLT------HVSNMYYS---IPQIELAKRLVACSF-AD--RV-FFSNTGTEANEAAIKFARKFQRH 181 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~~------~~~~~~~~---~~~~~la~~l~~~~~-~~--~v-~~~~sG~eA~~~al~~a~~~t~~ 181 (465)
-+++|++|+.+.+.... +....... +...+..++|++.++ ++ +| ++++||+.|+++++.....
T Consensus 14 ~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~---- 89 (360)
T PRK05355 14 LPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLG---- 89 (360)
T ss_pred CCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCC----
Confidence 57899999998874320 00001111 346778888888887 22 45 5558899999998875552
Q ss_pred cCCCCCCCCceEEEEcCCcccCccccccc-cCCCCcCCCCCCCCCCceEeeCCCHHHHHh-hcCCCCeEEEEEcccCCCC
Q 012368 182 SNPDSKEPATEFVSFTNSFHGRTMGALAL-TSKEHYRSPFEPVMPGVNFVEYGNIEATRK-LIQPGKTAAVFVEPIQGEG 259 (465)
Q Consensus 182 ~~~~~~~~~~~ii~~~~~yhg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~le~-~l~~~~~a~vi~ep~~~~~ 259 (465)
+++++++...+..|....-+.- -+..... ....+. ...+..++++ .+++ ++.+|.+..+..++
T Consensus 90 -------~g~~~l~i~~G~fg~r~~~~a~~~g~~~~~----~~~~~~---g~~~~~~~~~~~l~~-~~~~V~~th~eTst 154 (360)
T PRK05355 90 -------GGKKADYVDTGSWSKKAIKEAKKYGEVNVA----ASSEDD---GFTYIPPLDEWQLSD-DAAYVHYTSNETID 154 (360)
T ss_pred -------CCCeEEEEECCHHHHHHHHHHHHhCCceEE----eccccc---CCCCCCChhhccCCC-CCCEEEEccCCCcc
Confidence 4667777777766665422211 1111000 000000 0012334444 6654 57788888888888
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccCCCccceeeEEeCHHHHhhcc
Q 012368 260 GIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAIN 337 (465)
Q Consensus 260 G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~ 337 (465)
|++.++ +++| ||+++|+|-+++ +| +.....+.+ |++++| |.+| ...+|++++++++++.+.
T Consensus 155 Gv~~~~---i~~i------~g~l~vVDavss-~g--~~~idv~~~----d~~~~ssqK~lg-P~Glg~l~~s~~~l~~~~ 217 (360)
T PRK05355 155 GTEFHE---LPDT------GDVPLVADMSSD-IL--SRPIDVSKF----GLIYAGAQKNIG-PAGLTIVIVREDLLGRAL 217 (360)
T ss_pred eEecCc---cccc------CCCcEEEEcCcc-cc--CccCCHHHc----cEEEEecccccc-CCceEEEEECHHHHhhcc
Confidence 887532 5444 899999999987 43 222223322 466666 9885 455899999999988776
Q ss_pred CC-C----------Cc-CCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHHcCCCcee-e---eccce
Q 012368 338 YG-D----------HG-STFAGSPLVCNAAIAVLDKISNP-AFLASVSKKGHYFKETLKQKLARNPHVKD-V---RGLGL 400 (465)
Q Consensus 338 ~~-~----------~~-~t~~~~~~~~~aa~a~L~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~---~~~g~ 400 (465)
+. . .. ..++.|.....+..++|+.+.+. + ++++.++.+.+.+.+.+.+++.+.... . ...+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG-~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~ 296 (360)
T PRK05355 218 PSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGG-VAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRM 296 (360)
T ss_pred cCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccC-HHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCc
Confidence 52 1 11 12344566677777888887554 3 344444444444444444444443211 1 11234
Q ss_pred EEEEEecC--ChHHHHHHHHHCCceEeecCC-CCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 401 IIGIEFDV--SATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 401 ~~~i~~~~--~~~~~~~~l~~~Gv~v~~~~~-~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
.+.+.++. ...++...+.++|+.+..+.. .+.+|+++....|.+||+.+++.|+++++.
T Consensus 297 v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 297 NVPFTLADEELDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred EEEEEcCChHHHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 55666532 225666788899999854432 367999999999999999999999997753
No 329
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.55 E-value=9e-14 Score=122.13 Aligned_cols=165 Identities=24% Similarity=0.218 Sum_probs=113.0
Q ss_pred HHHHHHHHHhhc--CCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCC
Q 012368 142 QIELAKRLVACS--FADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSP 219 (465)
Q Consensus 142 ~~~la~~l~~~~--~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 219 (465)
..++.+++++.+ +.+++.+++||++|+..+++.++. ++++|++.++.|++.........+.....
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~~~~~~~g~~~~~-- 68 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLG-----------PGDEVIVDANGHGSRYWVAAELAGAKPVP-- 68 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCC-----------CCCEEEEeecccceehhhHHHhcCCEEEE--
Confidence 357888899998 788999999999999999998762 47789999999998873222211111110
Q ss_pred CCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccc
Q 012368 220 FEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW 299 (465)
Q Consensus 220 ~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~ 299 (465)
.+....... ..+.+.+++.....+++++++++.++++|...+ +++|.++|+++|+++|+|++|.++......
T Consensus 69 -v~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~----~~~l~~~~~~~~~~li~D~a~~~~~~~~~~- 140 (170)
T cd01494 69 -VPVDDAGYG--GLDVAILEELKAKPNVALIVITPNTTSGGVLVP----LKEIRKIAKEYGILLLVDAASAGGASPAPG- 140 (170)
T ss_pred -eccCCCCcc--chhhhhhhhccccCceEEEEEecCcCCCCeEcC----HHHHHHHHHHcCCEEEEecccccccccccc-
Confidence 011010000 012235555444557889999988888887665 589999999999999999999876443221
Q ss_pred cccccCCcccEEEec--ccCCCccceeeEEeC
Q 012368 300 AHEHYGIFPDIMTLA--KPLAGGLPIGAALVT 329 (465)
Q Consensus 300 ~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~ 329 (465)
.......+|+++.| |.+++ .++|+++++
T Consensus 141 -~~~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 141 -VLIPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred -cccccccCCEEEEEcccccCC-CceEEEEeC
Confidence 12223457888776 99987 788988764
No 330
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.55 E-value=4.6e-12 Score=137.71 Aligned_cols=299 Identities=15% Similarity=0.192 Sum_probs=176.5
Q ss_pred HHHHHHHHHhhcCCCeEEec-CCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCC
Q 012368 142 QIELAKRLVACSFADRVFFS-NTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPF 220 (465)
Q Consensus 142 ~~~la~~l~~~~~~~~v~~~-~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 220 (465)
..++.++|++.+|.+.+.+. ++|++|+..++.+++.|....+.. .+++|++. ..-|+.........+-....
T Consensus 544 i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~---~r~~vlis-~~aH~snp~sa~~~G~~vv~--- 616 (954)
T PRK05367 544 IDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEG---HRDVCLIP-SSAHGTNPASAVMAGMKVVV--- 616 (954)
T ss_pred HHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhhccCCC---CCCEEEEE-chhhhhhHHHHHHCCCEEEE---
Confidence 56788899999996666554 578888877777777664322211 24445555 45566554443332221111
Q ss_pred CCCCCCceEeeCCCHHHHHhhcCCC--CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc
Q 012368 221 EPVMPGVNFVEYGNIEATRKLIQPG--KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL 298 (465)
Q Consensus 221 ~~~~~~~~~~~~~d~~~le~~l~~~--~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~ 298 (465)
.+...... -|+++|+++++++ ++++|++.-. ++.|.+..+ +++|.++|+++|+++++|.++.+- ..+.
T Consensus 617 v~~d~~G~----iD~~~L~~~i~~~~~~la~V~it~p-st~G~~e~~---I~eI~~i~h~~G~~v~VDgA~~~a-l~~l- 686 (954)
T PRK05367 617 VACDENGN----IDLDDLRAKAEEHADNLAAIMITYP-STHGVFEET---IREICEIVHEHGGQVYLDGANMNA-QVGL- 686 (954)
T ss_pred ECCCCCCC----cCHHHHHHHHhccCCCeEEEEEEcC-CCCeeecCC---HHHHHHHHHHcCCEEEEECcChhh-ccCC-
Confidence 11111111 2789999999742 4666554432 233444222 999999999999999999998521 1111
Q ss_pred ccccccCCcccEEEec--ccCC-----CccceeeEEeCHHHHhhccCCCC--------cCCCCChHH----HHHHHHHHH
Q 012368 299 WAHEHYGIFPDIMTLA--KPLA-----GGLPIGAALVTEKVASAINYGDH--------GSTFAGSPL----VCNAAIAVL 359 (465)
Q Consensus 299 ~~~~~~~~~pdi~t~s--K~lg-----~G~~iG~v~~~~~i~~~~~~~~~--------~~t~~~~~~----~~~aa~a~L 359 (465)
. ..-....|+++++ |+|+ ||-.+|++.+++.+...+..... .++.+..+. ....+...+
T Consensus 687 -~-~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi 764 (954)
T PRK05367 687 -A-RPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYI 764 (954)
T ss_pred -C-ChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHH
Confidence 1 1112346888776 9885 24567888888766544421110 122222333 222344455
Q ss_pred HHhcCchHHHHHH---HHHHHHHHHHHHHHHcCCCcee----eeccceEEEE-Eec----CChHHHHHHHHHCCceEeec
Q 012368 360 DKISNPAFLASVS---KKGHYFKETLKQKLARNPHVKD----VRGLGLIIGI-EFD----VSATPVVDACRDSGLLVLTA 427 (465)
Q Consensus 360 ~~~~~~~~~~~~~---~~~~~l~~~l~~~~~~~~~~~~----~~~~g~~~~i-~~~----~~~~~~~~~l~~~Gv~v~~~ 427 (465)
..+..+.+.+..+ .+..++.++|.+. ++.... ..-...++.+ .++ ....++.++|.+.|+.....
T Consensus 765 ~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~---~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~ 841 (954)
T PRK05367 765 RMMGAEGLRQATEVAILNANYIAKRLKDH---YPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTM 841 (954)
T ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHhh---cCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEeec
Confidence 5555566555554 6777888877663 221110 0001122222 111 34678999999999987652
Q ss_pred C--CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 428 G--KGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 428 ~--~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
. ..+.++++|.-..+++|||++++++..+..+..+
T Consensus 842 ~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 842 SFPVAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred CCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 2 1368999999999999999999999998887765
No 331
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.55 E-value=1.4e-12 Score=129.42 Aligned_cols=299 Identities=20% Similarity=0.217 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEE
Q 012368 117 ADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSF 196 (465)
Q Consensus 117 p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~ 196 (465)
.+..+++.+.++.... . ...+...+++++++++++.+.++.++||+.|+.+|++++-. .++++||+.
T Consensus 5 ~e~~~~v~~~l~s~~~--~-~~g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~----------~~gdeVi~p 71 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWL--S-TYGPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGL----------GPGDEVIVP 71 (363)
T ss_dssp HHHHHHHHHHHHHTCC--S-SSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTG----------GTTSEEEEE
T ss_pred HHHHHHHHHHHHhCCc--c-CCCHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCC----------CcCceEecC
Confidence 3456677777766421 1 11466889999999999999999999999999999997431 158999999
Q ss_pred cCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHH
Q 012368 197 TNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDAC 276 (465)
Q Consensus 197 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~ 276 (465)
.-+|+.....+...+..+.+. ...+.... -|++++++++++ ++++|++....|.. .. +++|.++|
T Consensus 72 ~~t~~~~~~ai~~~G~~pv~~----Di~~~~~~---id~~~~~~~i~~-~t~ai~~~h~~G~~---~d----~~~i~~~~ 136 (363)
T PF01041_consen 72 AYTFPATASAILWAGAEPVFV----DIDPETLN---IDPEALEKAITP-KTKAILVVHLFGNP---AD----MDAIRAIA 136 (363)
T ss_dssp SSS-THHHHHHHHTT-EEEEE-----BETTTSS---B-HHHHHHHHHT-TEEEEEEE-GGGB----------HHHHHHHH
T ss_pred CCcchHHHHHHHHhccEEEEE----eccCCcCC---cCHHHHHHHhcc-CccEEEEecCCCCc---cc----HHHHHHHH
Confidence 999987776666665544432 11111110 189999999986 46777777666543 22 89999999
Q ss_pred HHhCCEEEEeccccCCCCCCccccccccCCcccEEEec----ccCCCccceeeEEeC-HHHHhhccCC---C--------
Q 012368 277 DDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA----KPLAGGLPIGAALVT-EKVASAINYG---D-------- 340 (465)
Q Consensus 277 ~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s----K~lg~G~~iG~v~~~-~~i~~~~~~~---~-------- 340 (465)
+++|++||.|-+|+ +|- .+.-...|-.-|+.+|| |.+..| -.|+++.+ +++.+.+... .
T Consensus 137 ~~~~i~lIeD~a~a-~g~---~~~g~~~G~~gd~~~fSf~~~K~i~~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 211 (363)
T PF01041_consen 137 RKHGIPLIEDAAQA-FGA---RYKGRPVGSFGDIAIFSFHPTKIITTG-EGGAVVTNDPELAERARALRNHGRSRDAFRR 211 (363)
T ss_dssp HHTT-EEEEE-TTT-TT----EETTEETTSSSSEEEEESSTTSSS-SS-S-EEEEESTHHHHHHHHHHTBTTEETSECST
T ss_pred HHcCCcEEEccccc-cCc---eeCCEeccCCCCceEecCCCCCCCcCC-CCeeEEecHHHHHHHhhhhhccCcCcccccc
Confidence 99999999999997 431 11111223334777776 888644 23788775 4555544221 1
Q ss_pred ------CcCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceee---e----ccceEEEEEec
Q 012368 341 ------HGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDV---R----GLGLIIGIEFD 407 (465)
Q Consensus 341 ------~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~----~~g~~~~i~~~ 407 (465)
.+..+..+.+..+.+++-|+.+ ++..++-+++.+++ .+.+...+.+... . .....+.+.++
T Consensus 212 ~~~~~~~g~n~rm~~~~AAigl~QL~~L--~~~~~~R~~~a~~y----~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~ 285 (363)
T PF01041_consen 212 YRHELPPGYNFRMSELQAAIGLAQLKRL--DEIIARRRENAQRY----REALAGIPGIKPPPIPDGAERSSYYRFPIRLP 285 (363)
T ss_dssp TEESSSS--B-B-BHHHHHHHHHHHHTH--HHHHHHHHHHHHHH----HHHHTTGTTEEEEGCGTTTEEBCESSEEEEET
T ss_pred ccccccCCcccccHHHHHHHHHHHHHHh--hhhHHHHHHHHHHH----HHHHhcCCCccccccccccccccccccccccc
Confidence 1223445666666666666543 23333334444444 4444444433211 1 11122334443
Q ss_pred C----ChHHHHHHHHHCCceEeecCC---------------------------CCEEEEecCCCCcHHHHHHHHHHHH
Q 012368 408 V----SATPVVDACRDSGLLVLTAGK---------------------------GNVVRLVPPLIISEQELDQAVEILC 454 (465)
Q Consensus 408 ~----~~~~~~~~l~~~Gv~v~~~~~---------------------------~~~lRi~~~~~~t~e~i~~~l~~l~ 454 (465)
. ...++.+.|.++||.+.+... ...+.+-.....++++++.+++.|+
T Consensus 286 ~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 286 DEALADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp CCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 2 467899999999998764320 0124444456678999999888774
No 332
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.54 E-value=4.6e-12 Score=134.69 Aligned_cols=289 Identities=17% Similarity=0.197 Sum_probs=177.8
Q ss_pred HHHHHHHHHhhcCCCeEEecC-CHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCC
Q 012368 142 QIELAKRLVACSFADRVFFSN-TGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPF 220 (465)
Q Consensus 142 ~~~la~~l~~~~~~~~v~~~~-sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 220 (465)
..+|.+++++.+|.+.+-+-+ ||+.+..+++.+.+.|...+++. .|++||+ ..+-||.........+..
T Consensus 545 i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~---~r~~vLI-p~saHgtNpasa~~~Gie------ 614 (954)
T PRK12566 545 IDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQS---QRDICLI-PSSAHGTNPASAQMAGMR------ 614 (954)
T ss_pred HHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCC---CCCEEEe-cccccccCHHHHHHCCCE------
Confidence 567888999999988776665 89999888888888887655543 3555554 456676654433222211
Q ss_pred CCCCCCceEeeC-----CCHHHHHhhcC--CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 221 EPVMPGVNFVEY-----GNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 221 ~~~~~~~~~~~~-----~d~~~le~~l~--~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
+..+|. -|+++|+++++ +.++++|++...+.. |++. +.+++|.++|+++|+++++|-++. .+
T Consensus 615 ------Vv~Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~-Gv~e---~~V~eI~~iah~~Galv~vDgA~~-~a 683 (954)
T PRK12566 615 ------VVIVECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTH-GVYE---EGIREICEVVHQHGGQVYMDGANL-NA 683 (954)
T ss_pred ------EEEeccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcC-ceec---chHHHHHHHHHHcCCEEEEEeeCh-hh
Confidence 122222 18999999996 245666666544433 3332 239999999999999999999875 21
Q ss_pred CCCccccccc-cCCcccEEEec--ccCCC-----ccceeeEEeCHHHHhhccCC----------CCc---CCCCChHHHH
Q 012368 294 RTGYLWAHEH-YGIFPDIMTLA--KPLAG-----GLPIGAALVTEKVASAINYG----------DHG---STFAGSPLVC 352 (465)
Q Consensus 294 r~g~~~~~~~-~~~~pdi~t~s--K~lg~-----G~~iG~v~~~~~i~~~~~~~----------~~~---~t~~~~~~~~ 352 (465)
-. .... -.+..|+++++ |+|++ |.-+|.+.+++.+...+... ..+ ....++.+..
T Consensus 684 ~~----~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l 759 (954)
T PRK12566 684 QV----GLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASIL 759 (954)
T ss_pred cc----CCCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHH
Confidence 11 1111 13456888776 98852 35567777777555444311 011 1122333444
Q ss_pred HHHHHHHHHhcCchHHHHHHH----HHHHHHHHHHHHHHcCCCceeeeccce-E--EEEEec-------CChHHHHHHHH
Q 012368 353 NAAIAVLDKISNPAFLASVSK----KGHYFKETLKQKLARNPHVKDVRGLGL-I--IGIEFD-------VSATPVVDACR 418 (465)
Q Consensus 353 ~aa~a~L~~~~~~~~~~~~~~----~~~~l~~~l~~~~~~~~~~~~~~~~g~-~--~~i~~~-------~~~~~~~~~l~ 418 (465)
.++...++.+..+ +.++.+ +..+++++|.+ .++.... ...+. + +.+.+. .+..++.++|.
T Consensus 760 ~~A~~Yi~~lG~e--Lk~aa~~ailnAnYla~rL~~---~~~v~~~-~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~ 833 (954)
T PRK12566 760 PISWMYIAMMGPQ--LADASEVAILSANYLANQLGG---AFPVLYR-GRNERVAHECILDLRPLKAQTGISEEDVAKRLM 833 (954)
T ss_pred HHHHHHHHHHCHH--HHHHHHHHHHHHHHHHHHhHh---hCCCCcC-CCCCCeeeEEEEEccccccccCCCHHHHHHHHH
Confidence 5555556655443 333333 56677766655 2332221 11111 1 222221 34577999999
Q ss_pred HCCceEeecC--CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 419 DSGLLVLTAG--KGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 419 ~~Gv~v~~~~--~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
+.|+...... ..+.+|++|.-..+++|||+++++|..+.++.+
T Consensus 834 d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~ 878 (954)
T PRK12566 834 DYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEIG 878 (954)
T ss_pred HCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 9998764321 147899999999999999999999999888754
No 333
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.54 E-value=1.3e-11 Score=131.96 Aligned_cols=292 Identities=18% Similarity=0.211 Sum_probs=184.5
Q ss_pred HHHHHHHHHhhcCCC-eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCC
Q 012368 142 QIELAKRLVACSFAD-RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPF 220 (465)
Q Consensus 142 ~~~la~~l~~~~~~~-~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 220 (465)
..++.++|++.+|.+ --++.++|+.|...++.++|.|...+++. .| .+++...+-||+........+.
T Consensus 532 i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~---~R-~~vlip~saHgtnPasa~~~G~------- 600 (939)
T TIGR00461 532 IAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGEN---HR-NICLIPVSAHGTNPASAAMAGM------- 600 (939)
T ss_pred HHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCC---CC-CEEEEEccccCcCHHHHHHCCC-------
Confidence 668999999999965 45667888888887888888776444432 24 4555556778776554333222
Q ss_pred CCCCCCceEeeC-----CCHHHHHhhcCC--CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC-C
Q 012368 221 EPVMPGVNFVEY-----GNIEATRKLIQP--GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG-L 292 (465)
Q Consensus 221 ~~~~~~~~~~~~-----~d~~~le~~l~~--~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g-~ 292 (465)
.+..+|. -|+++|++++++ .++++|++...+.. |.+.++ +++|.++|+++|.++++|-++.. .
T Consensus 601 -----~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst~-G~~e~~---I~eI~~iah~~G~~v~VDgAq~~al 671 (939)
T TIGR00461 601 -----QVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPSTH-GVFEPT---IQHACDIVHSFGGQVYLDGANMNAQ 671 (939)
T ss_pred -----EEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCcC-ceeccc---HHHHHHHHHHcCCEEEEEecChhhC
Confidence 1222222 189999999973 46777766544334 555433 89999999999999999999853 2
Q ss_pred CCCCccccccccCCcccEEEec--ccCC-----CccceeeEEeCHHHHhhccCCCC----------------cCCCCChH
Q 012368 293 GRTGYLWAHEHYGIFPDIMTLA--KPLA-----GGLPIGAALVTEKVASAINYGDH----------------GSTFAGSP 349 (465)
Q Consensus 293 gr~g~~~~~~~~~~~pdi~t~s--K~lg-----~G~~iG~v~~~~~i~~~~~~~~~----------------~~t~~~~~ 349 (465)
+ + ....-....|+++++ |+|+ ||-.+|.+.+++++...+-.... .+...++.
T Consensus 672 ~--~---l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a 746 (939)
T TIGR00461 672 V--G---LTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSA 746 (939)
T ss_pred C--C---CCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcH
Confidence 1 1 111112457888875 9887 45778999999876544321100 11123445
Q ss_pred HHHHHHHHHHHHhcCchHH---HHHHHHHHHHHHHHHHHHHcCCCceeeeccceE---EEEEec-------CChHHHHHH
Q 012368 350 LVCNAAIAVLDKISNPAFL---ASVSKKGHYFKETLKQKLARNPHVKDVRGLGLI---IGIEFD-------VSATPVVDA 416 (465)
Q Consensus 350 ~~~~aa~a~L~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~---~~i~~~-------~~~~~~~~~ 416 (465)
+....+...|..+..+.+. +....+..++.++|.+ .++.. .....+.+ +.+++. ....++.++
T Consensus 747 ~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~---~~~~l-~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakr 822 (939)
T TIGR00461 747 SILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD---HYPIL-FVGTLKHVAHECILDLRPLKAKTGIEAIDVAKR 822 (939)
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc---cCccc-ccCCCCceeEEEEEeccchhhhcCCCHHHHHHH
Confidence 5556666777776655543 3344466677777765 22221 11111221 223332 356889999
Q ss_pred HHHCCceEeecC-C-CCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 417 CRDSGLLVLTAG-K-GNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 417 l~~~Gv~v~~~~-~-~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
|++.|+...... + .+.+-|.|.-..|++|||++++++.++-+++++
T Consensus 823 L~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 823 LQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred HHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 999998764322 1 246778888888999999999999888777655
No 334
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.54 E-value=3e-12 Score=124.26 Aligned_cols=303 Identities=17% Similarity=0.199 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEE
Q 012368 117 ADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSF 196 (465)
Q Consensus 117 p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~ 196 (465)
.+..+++.+.++.+... .-+...++++++++++|...++.++|||.|+.+|++++- -+ ++|.||+.
T Consensus 15 ~~e~~~v~~vl~sg~i~----~G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~--ig--------~GDeVI~p 80 (374)
T COG0399 15 EEELAAVQEVLKSGWLT----GGPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALA--IG--------PGDEVIVP 80 (374)
T ss_pred hHHHHHHHHHHHcCCee----cChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcC--CC--------CCCEEEec
Confidence 45667777777764322 134467899999999999999999999999999999543 11 68999999
Q ss_pred cCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHH
Q 012368 197 TNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDAC 276 (465)
Q Consensus 197 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~ 276 (465)
+-+|-.....++..+..+.+.+ ..++..- -|++.+|++|.+. +++||.-...|.. .. +++|.++|
T Consensus 81 s~TfvATan~i~~~Ga~PVFvD----id~~T~n---id~~~ie~aIt~~-tKAIipVhl~G~~---~d----m~~i~~la 145 (374)
T COG0399 81 SFTFVATANAVLLVGAKPVFVD----IDPDTLN---IDPDLIEAAITPR-TKAIIPVHLAGQP---CD----MDAIMALA 145 (374)
T ss_pred CCchHHHHHHHHHcCCeEEEEe----cCCcccC---CCHHHHHHHcccC-CeEEEEehhccCC---CC----HHHHHHHH
Confidence 9888766655555555544331 1111110 1899999999864 7777766555543 33 89999999
Q ss_pred HHhCCEEEEeccccCCCCCCccccccccCCcccEEEec----ccCCCccceeeEEeC-HHHHhhccCC-CC---------
Q 012368 277 DDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA----KPLAGGLPIGAALVT-EKVASAINYG-DH--------- 341 (465)
Q Consensus 277 ~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s----K~lg~G~~iG~v~~~-~~i~~~~~~~-~~--------- 341 (465)
++||++||.|.+|+ +|-. +.-...|-.-|+.+|| |.++.| -.|+++.+ +++.+.++.. .|
T Consensus 146 ~~~~l~vIEDaAqa-~Ga~---y~gk~vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~ 220 (374)
T COG0399 146 KRHGLPVIEDAAQA-HGAT---YKGKKVGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNHGLSRDAVFK 220 (374)
T ss_pred HHcCCeEEEEcchh-ccCe---ecCcccccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHhCcCCCcccc
Confidence 99999999999987 5321 1111223334677776 999866 56888875 5666655321 11
Q ss_pred ------cCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCC-Cceeeeccce-----EEEEEec--
Q 012368 342 ------GSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNP-HVKDVRGLGL-----IIGIEFD-- 407 (465)
Q Consensus 342 ------~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~g~-----~~~i~~~-- 407 (465)
+..+..+-+.++.+++-|+.+ +++.++-++..++..+.|+ +.+ ........+. ++.+.++
T Consensus 221 y~~~~~G~N~rm~~iqAAigl~QL~~l--~~~~~~R~~~a~~Y~~~l~----~~~~~~~p~~~~~~~~~~~~~~i~~~~~ 294 (374)
T COG0399 221 YLHEELGYNYRLTEIQAAIGLAQLERL--DEINERRREIAQIYAEALK----GLPGITLPPEPDGAVHAWHLYTILVDEE 294 (374)
T ss_pred ceeeecccccCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhh----cCCCccccCCCCCceeeeeeeEEEecCC
Confidence 112223334444444444432 3444444444444444444 332 1111111121 1222222
Q ss_pred -CChHHHHHHHHHCCce----EeecC--------------C--------CCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 408 -VSATPVVDACRDSGLL----VLTAG--------------K--------GNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 408 -~~~~~~~~~l~~~Gv~----v~~~~--------------~--------~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
..-..+...|.++||. ..|.. . .+.+.+=.....+++++++.++.|++++..
T Consensus 295 ~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 295 GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred CCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 2346788999999655 23311 0 123554334567999999999999988753
No 335
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.53 E-value=1.4e-11 Score=113.50 Aligned_cols=334 Identities=17% Similarity=0.084 Sum_probs=202.4
Q ss_pred EeCCCCEEEecccCcccccCCCCCHHHHHHHHH-HHhhcccc----cC---CCCCHHHHHHHHHHHhhcC--CCeEEecC
Q 012368 93 YDAEGREYLDLSSGIAVNALGHGDADWIKAVVD-QANVLTHV----SN---MYYSIPQIELAKRLVACSF--ADRVFFSN 162 (465)
Q Consensus 93 ~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~-~~~~~~~~----~~---~~~~~~~~~la~~l~~~~~--~~~v~~~~ 162 (465)
-+.+|-.||| .++||..++.+.+...+ +.+.+... .+ ..+-..-+.|..+|+...| ..+|..++
T Consensus 27 ~lp~~viyLd------gnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~d 100 (407)
T COG3844 27 ALPGGVIYLD------GNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVTD 100 (407)
T ss_pred cCCCCeEEee------ccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEeC
Confidence 3446667887 34688655455554444 33332211 11 1122334567778887777 67888888
Q ss_pred CHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCc-cccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhh
Q 012368 163 TGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRT-MGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKL 241 (465)
Q Consensus 163 sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~ 241 (465)
|.+--+.-.+-++...+ +++.||+++..-...- ..+..+. ... ....++..+ .++++++++
T Consensus 101 tts~nl~k~L~aalr~~---------~~r~vIv~E~~~fpTdly~a~g~~---~~~----~~~~~~~~~--~~P~~~~~~ 162 (407)
T COG3844 101 TTSINLFKVLAAALRPQ---------EGRRVIVSEGDNFPTDLYIAEGLA---DLL----GIGYDLEGV--IAPRALEEA 162 (407)
T ss_pred CcchHHHHHHHHHhccC---------CCceEEeecCCCCCcchhhhcchh---hhh----cccccceee--eChHHHHHh
Confidence 77765555555554322 3667777776532221 1111110 000 000111111 256789999
Q ss_pred cCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc-cccccccCCcccEEEecccCCCc
Q 012368 242 IQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LWAHEHYGIFPDIMTLAKPLAGG 320 (465)
Q Consensus 242 l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~-~~~~~~~~~~pdi~t~sK~lg~G 320 (465)
++. +++.|++..++.-+|.+.. +.+|.+++++||++++.|=+|+- |. .......|...-|-|--|.+.||
T Consensus 163 ~~d-d~AvV~L~~V~y~TGql~d----m~aiT~~AH~~galv~wDLAHsa----Gavp~~Lh~~gaDfaigcsyKYLNgG 233 (407)
T COG3844 163 ITD-DVAVVLLSHVNYKTGQLLD----MRAITALAHQHGALVGWDLAHSA----GAVPVDLHAAGADFAIGCSYKYLNGG 233 (407)
T ss_pred hcc-ceEEEEeccccccccceee----HHHHHHHHHhcCceEEeehhccc----CCcceeecccCCCeeeeeeceeccCC
Confidence 874 7999999999999998876 99999999999999999999872 22 11222334433344556999864
Q ss_pred -cceeeEEeCHHHHhhccC-C-------------------CCcCCC---CChHHHHHHHHHHHHHhcCc---hHHHHHHH
Q 012368 321 -LPIGAALVTEKVASAINY-G-------------------DHGSTF---AGSPLVCNAAIAVLDKISNP---AFLASVSK 373 (465)
Q Consensus 321 -~~iG~v~~~~~i~~~~~~-~-------------------~~~~t~---~~~~~~~~aa~a~L~~~~~~---~~~~~~~~ 373 (465)
-..+++.+.++..+...+ . ....-| +.+.+++++...+|++..+- ++.++--.
T Consensus 234 PGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSla 313 (407)
T COG3844 234 PGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLA 313 (407)
T ss_pred CCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhH
Confidence 233444444443333211 1 001111 12456777778888887553 34444444
Q ss_pred HHHHHHHHHHHHHHcCCCce----eeeccceEEEEEecCChHHHHHHHHHCCceEeecCCCCEEEEec-CCCCcHHHHHH
Q 012368 374 KGHYFKETLKQKLARNPHVK----DVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVP-PLIISEQELDQ 448 (465)
Q Consensus 374 ~~~~l~~~l~~~~~~~~~~~----~~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~-~~~~t~e~i~~ 448 (465)
+.+++.+.++.....+++.. .-...|.-+.+.++ ...++++.|.++||+..-..+ +++||.| |++.+-+|+-.
T Consensus 314 LTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp-~~~~V~qaLi~rGVigD~R~P-~vlRfgftPlY~~~~DVw~ 391 (407)
T COG3844 314 LTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP-HGYQVMQALIDRGVIGDFREP-DVLRFGFTPLYVSFVDVWD 391 (407)
T ss_pred HHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC-cHHHHHHHHHHcCccccccCC-CeeeecCccceechhHHHH
Confidence 55666666655544444211 12245777776663 677899999999998766554 8999977 78899999999
Q ss_pred HHHHHHHHHHHhh
Q 012368 449 AVEILCKTLPVLD 461 (465)
Q Consensus 449 ~l~~l~~~l~~~~ 461 (465)
+++.|++++.+..
T Consensus 392 AV~~L~evL~t~a 404 (407)
T COG3844 392 AVDALEEVLDTLA 404 (407)
T ss_pred HHHHHHHHHHhhc
Confidence 9999999998753
No 336
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.53 E-value=2.5e-12 Score=127.22 Aligned_cols=303 Identities=11% Similarity=0.017 Sum_probs=171.5
Q ss_pred CCHHHHHHHHHHHhhccccc--CC-CC---C---HHHHHHHHHHHhhcC---CCeEEecCC-HHHHHHHHHHHHHHHhhh
Q 012368 115 GDADWIKAVVDQANVLTHVS--NM-YY---S---IPQIELAKRLVACSF---ADRVFFSNT-GTEANEAAIKFARKFQRH 181 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~--~~-~~---~---~~~~~la~~l~~~~~---~~~v~~~~s-G~eA~~~al~~a~~~t~~ 181 (465)
-++.|++|+.+.+....... .. .. . ....+.++.++++++ .+.|+|++| ||+|++.++..... .+
T Consensus 10 ~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~-~~- 87 (355)
T cd00611 10 LPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLG-DK- 87 (355)
T ss_pred CCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC-CC-
Confidence 57899999999875432110 00 11 1 336678888888887 356888876 99999998886531 00
Q ss_pred cCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC------CC-HHHHHhhcCCCCeEEEEEcc
Q 012368 182 SNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY------GN-IEATRKLIQPGKTAAVFVEP 254 (465)
Q Consensus 182 ~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d-~~~le~~l~~~~~a~vi~ep 254 (465)
.+++. |+..+..|.+...+...+ ..+..++. .+ .+..+..++ .++++|.+..
T Consensus 88 ------~~~~~-i~~g~~~~~~~~~a~~~g-------------~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~lV~~~h 146 (355)
T cd00611 88 ------GTADY-VVTGAWSAKAAKEAKRYG-------------GVVVIVAAKEEGKYTKIPDVETWDLA-PDAAYVHYCS 146 (355)
T ss_pred ------CeEEE-EECCHHHHHHHHHHHhcC-------------CCcEEEecccccCCCCCCCHhhcCCC-CCCCEEEEeC
Confidence 02333 333222221111111111 11111211 12 222223343 3567788877
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHh
Q 012368 255 IQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVAS 334 (465)
Q Consensus 255 ~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~ 334 (465)
+.+..|+..+ ++++.||+++++|-+++ +| +.....+.++ .++.+--|.+| ...+|++++++++.+
T Consensus 147 ~~t~tG~~~~---------~i~~~~g~~~~VDa~qs-~g--~~~idv~~~~--~~~ss~~K~lG-P~G~g~l~~~~~~~~ 211 (355)
T cd00611 147 NETIHGVEFD---------EVPDTGGVPLVADMSSN-IL--SRPIDVSKFG--VIYAGAQKNLG-PAGVTVVIVRKDLLG 211 (355)
T ss_pred CcccccEEcc---------eecccCCCeEEEEcccc-cc--CCCCCHHHhC--EEEeecccccC-CCceEEEEECHHHHh
Confidence 7777777532 45566999999999998 43 2222333333 22222348774 456899999999887
Q ss_pred hccCCC-----------CcCCC-CChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHHcCCCce-ee---e-
Q 012368 335 AINYGD-----------HGSTF-AGSPLVCNAAIAVLDKISNP-AFLASVSKKGHYFKETLKQKLARNPHVK-DV---R- 396 (465)
Q Consensus 335 ~~~~~~-----------~~~t~-~~~~~~~~aa~a~L~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~---~- 396 (465)
.+.+.. ...++ +.|.....+..++|+.+.+. + .+++.++...+.+.|.+.+++.|.+. .. .
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg-~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~ 290 (355)
T cd00611 212 KARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGG-VEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRA 290 (355)
T ss_pred hcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHHHHhCccccccCCCHHH
Confidence 665421 11112 34555677777888877544 3 34444444444444444444443211 11 1
Q ss_pred ccceEEEEEecCC--hHHHHHHHHHCCceEeecCC-CCEEEEecCCCCcHHHHHHHHHHHHHH
Q 012368 397 GLGLIIGIEFDVS--ATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKT 456 (465)
Q Consensus 397 ~~g~~~~i~~~~~--~~~~~~~l~~~Gv~v~~~~~-~~~lRi~~~~~~t~e~i~~~l~~l~~~ 456 (465)
..+..+.+.++.. ..++...+.++|+.+.++.. .+.+|+++...+|++||+++++.|+++
T Consensus 291 rs~~vvsf~~~~~~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 291 RSRMNVPFRLGKEELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred cCceEEEEEcCChhhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 1224466665331 24555677889997444422 368999999999999999999999874
No 337
>PLN02880 tyrosine decarboxylase
Probab=99.52 E-value=2.4e-12 Score=131.71 Aligned_cols=312 Identities=13% Similarity=0.066 Sum_probs=176.6
Q ss_pred CHHHHHHHHHHHhhcC-CC--------eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCcccccc
Q 012368 139 SIPQIELAKRLVACSF-AD--------RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALA 209 (465)
Q Consensus 139 ~~~~~~la~~l~~~~~-~~--------~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~ 209 (465)
...+.++.+++++.++ ++ .-++++|||+||..|+.+||.......... ..+.-+++.+..-|.+..-+..
T Consensus 121 ~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~-~~~~~vv~~S~~aH~Sv~Kaa~ 199 (490)
T PLN02880 121 TELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKN-ALEKLVVYASDQTHSALQKACQ 199 (490)
T ss_pred HHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhccc-ccCCeEEEEcCCchHHHHHHHH
Confidence 3457788889998887 33 268899999999999999997542111000 0123355555555766655544
Q ss_pred ccCCCCcCCCCCCCCC--CceEeeCCCHHHHHhhcCC-----CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCE
Q 012368 210 LTSKEHYRSPFEPVMP--GVNFVEYGNIEATRKLIQP-----GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGAL 282 (465)
Q Consensus 210 ~~~~~~~~~~~~~~~~--~~~~~~~~d~~~le~~l~~-----~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~l 282 (465)
+.+-........|... +.. -|+++|+++|+. ..+.+|+..--..+.|.+-| +++|.++|++||++
T Consensus 200 ~lGlg~~~v~~Vp~d~~~~~~----md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp----l~eI~~i~~~~~iw 271 (490)
T PLN02880 200 IAGIHPENCRLLKTDSSTNYA----LAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP----LLELGKIAKSNGMW 271 (490)
T ss_pred HcCCCHHHEEEeecCCCcCCc----CCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc----HHHHHHHHHHcCCE
Confidence 3332110000011110 111 178999998852 23455555554455566655 99999999999999
Q ss_pred EEEeccccCCCCCCccccccccCC-cccEEEec--ccCCCccceeeEEeCHH--HHhhccCC----CC-----cCCC---
Q 012368 283 LVFDEVQCGLGRTGYLWAHEHYGI-FPDIMTLA--KPLAGGLPIGAALVTEK--VASAINYG----DH-----GSTF--- 345 (465)
Q Consensus 283 lI~DEv~~g~gr~g~~~~~~~~~~-~pdi~t~s--K~lg~G~~iG~v~~~~~--i~~~~~~~----~~-----~~t~--- 345 (465)
+++|-+|.|+...-..+-....++ ..|.+++. |.+...++.|+++.+.. +...+... .. ..++
T Consensus 272 lHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~ 351 (490)
T PLN02880 272 FHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYK 351 (490)
T ss_pred EEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChh
Confidence 999999876422111111112343 57877764 99988899999998742 22222110 00 0011
Q ss_pred -----CChHHHHHHHHHHHHHhcCchHHHHHH---HHHHHHHHHHHHHHHcCCCceee-eccceEEEEEec-C--Ch---
Q 012368 346 -----AGSPLVCNAAIAVLDKISNPAFLASVS---KKGHYFKETLKQKLARNPHVKDV-RGLGLIIGIEFD-V--SA--- 410 (465)
Q Consensus 346 -----~~~~~~~~aa~a~L~~~~~~~~~~~~~---~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~i~~~-~--~~--- 410 (465)
.+..+.......+|+.+..+.+.+.++ ++.+++.+.+ .+.+.+..+ +....++.+.+. . +.
T Consensus 352 ~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l----~~~~~~el~~~~~~~iv~Fr~~~~~~~~~~~ 427 (490)
T PLN02880 352 DWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLV----AQDSRFEVVTPRIFSLVCFRLVPPKNNEDNG 427 (490)
T ss_pred ccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH----hcCCCEEEecCCceEEEEEEEeCCCCChhhH
Confidence 111222334445566666666666666 5555555444 344432222 223334455542 1 11
Q ss_pred ----HHHHHHHHHCCce-Eeec--CCCCEEEEecC-CCCcHHHHHHHHHHHHHHHHHhhhc
Q 012368 411 ----TPVVDACRDSGLL-VLTA--GKGNVVRLVPP-LIISEQELDQAVEILCKTLPVLDSN 463 (465)
Q Consensus 411 ----~~~~~~l~~~Gv~-v~~~--~~~~~lRi~~~-~~~t~e~i~~~l~~l~~~l~~~~~~ 463 (465)
.++.++|.+.|-. +.+. ....++|+++. ..+++++++.+++.|.+...++...
T Consensus 428 ~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~~ 488 (490)
T PLN02880 428 NKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLGK 488 (490)
T ss_pred HHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 3466666666644 3332 11257999875 4456799999999999988876543
No 338
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.52 E-value=2.8e-12 Score=127.06 Aligned_cols=234 Identities=12% Similarity=0.176 Sum_probs=144.2
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+.+..++...+|+++++++.+.+.++.++||+.|+.+++.... .++|+||+....|.+........-
T Consensus 58 Y~r~~~P~~~~lE~~la~leg~~~av~~sSG~aAi~~al~all-----------~~GD~Vl~~~~~yg~t~~~~~~~~-- 124 (384)
T PRK06434 58 YTRWGNPTVQAFEEKYAVLENAEHALSFSSGMGAITSAILSLI-----------KKGKRILSISDLYGQTFYFFNKVL-- 124 (384)
T ss_pred eeCCCChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHh-----------CCCCEEEEecCccchHHHHHHHHH--
Confidence 4556677789999999999998889999999999999998654 168999998877754442221100
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
......+.+++.++.+.++ +++.++.+|++|.+.+..+.+.+ +++|.++|++++ +++|.++...
T Consensus 125 -------~~~Gi~v~fvd~~~~~~~~--l~~~~tklv~~e~~snpt~~v~D----i~~I~~la~~~~--lvVD~t~~s~- 188 (384)
T PRK06434 125 -------KTLGIHVDYIDTDRLNSLD--FDPSNYDLIYAESITNPTLKVPD----IKNVSSFCHEND--VIVDATFASP- 188 (384)
T ss_pred -------HhcCcEEEEECCCChhhee--ecCCCeeEEEEEcCCCCCceeec----HHHHHHHHHHcC--eEEECCCCCc-
Confidence 0111234455544444444 44446789999987666655554 999999999998 4569986321
Q ss_pred CCCccccccccCCcccEEEec--ccCCC-c-cceeeEEe-CHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcCchHH
Q 012368 294 RTGYLWAHEHYGIFPDIMTLA--KPLAG-G-LPIGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFL 368 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~t~s--K~lg~-G-~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~ 368 (465)
. .....+...|++++| |.++| | .-.|+++. ++++.+.+...........+|+.++.++..|+.+ +..+
T Consensus 189 ~-----~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~tL--~~R~ 261 (384)
T PRK06434 189 Y-----NQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLKTL--GLRM 261 (384)
T ss_pred c-----cCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCcH--HHHH
Confidence 1 222234457888766 99986 4 44677766 4556555432111122334566555444444322 3344
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcee------------eeccceEEEEEec
Q 012368 369 ASVSKKGHYFKETLKQKLARNPHVKD------------VRGLGLIIGIEFD 407 (465)
Q Consensus 369 ~~~~~~~~~l~~~l~~~~~~~~~~~~------------~~~~g~~~~i~~~ 407 (465)
++-.++...+.+. ++.+|.+.. .++.|.++.++++
T Consensus 262 ~r~~~~a~~~a~~----L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~ 308 (384)
T PRK06434 262 EKHNKNGMELARF----LRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELR 308 (384)
T ss_pred HHHHHHHHHHHHH----HHcCCCccEEECCChHHHHHhcCCCCceEEEEEC
Confidence 4444555554444 445553322 2467889999984
No 339
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.51 E-value=1.1e-13 Score=133.40 Aligned_cols=225 Identities=16% Similarity=0.132 Sum_probs=131.0
Q ss_pred CCHHHHHHHHHHHhhcCCCeEEe-cCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCc
Q 012368 138 YSIPQIELAKRLVACSFADRVFF-SNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHY 216 (465)
Q Consensus 138 ~~~~~~~la~~l~~~~~~~~v~~-~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~ 216 (465)
+.....++.+++++.++.+++++ ++|+++|+..++..+.. ++++|++..++|..........+..+.+
T Consensus 57 ~~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~~-----------~gd~Vlv~~~~h~s~~~~~~~~g~~~~~ 125 (294)
T cd00615 57 PTGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCG-----------PGDKILIDRNCHKSVINGLVLSGAVPVY 125 (294)
T ss_pred CChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcCC-----------CCCEEEEeCCchHHHHHHHHHCCCEEEE
Confidence 44457788888898888666655 99999999998876541 6889999998876554333222222222
Q ss_pred CCCCCCCCCCceEeeCCCHHHHHhhcCC-CCeE-EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC-CC
Q 012368 217 RSPFEPVMPGVNFVEYGNIEATRKLIQP-GKTA-AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG-LG 293 (465)
Q Consensus 217 ~~~~~~~~~~~~~~~~~d~~~le~~l~~-~~~a-~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g-~g 293 (465)
..+ ....+.......|+++++++++. .+++ +++++| +. .|.+.+ +++|.++|+++|+++|+||+|.. +.
T Consensus 126 v~~--~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~-~G~~~d----l~~I~~~~~~~g~~livDeA~~~~~~ 197 (294)
T cd00615 126 LKP--ERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TY-YGICYN----LRKIVEEAHHRGLPVLVDEAHGAHFR 197 (294)
T ss_pred ecC--ccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CC-CCEecC----HHHHHHHHHhcCCeEEEECcchhhhc
Confidence 111 00011000011388999999863 3444 445555 33 566554 89999999999999999999864 22
Q ss_pred CCCccccccccCCcccEE--EecccCCCccceee-EEeCHHHH--hhccC-CCCcCCCCChHHHHHHHHHHHHHhc--Cc
Q 012368 294 RTGYLWAHEHYGIFPDIM--TLAKPLAGGLPIGA-ALVTEKVA--SAINY-GDHGSTFAGSPLVCNAAIAVLDKIS--NP 365 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~--t~sK~lg~G~~iG~-v~~~~~i~--~~~~~-~~~~~t~~~~~~~~~aa~a~L~~~~--~~ 365 (465)
..+. ..........|++ +++|+++ |++.|+ +..+.+.. +.+.. .....+.+.+.+.+++..++++.+. .+
T Consensus 198 ~~~~-~~~~~~~~~~div~~S~hK~l~-g~~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~g~ 275 (294)
T cd00615 198 FHPI-LPSSAAMAGADIVVQSTHKTLP-ALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMMALEGK 275 (294)
T ss_pred cCcc-cCcchhhcCCcEEEEchhcccc-hHhHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHhH
Confidence 2221 1111112235666 4669874 455433 33433311 11111 1122344566677777777776653 24
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 012368 366 AFLASVSKKGHYFKETLK 383 (465)
Q Consensus 366 ~~~~~~~~~~~~l~~~l~ 383 (465)
++.+++.++.+.+++.+.
T Consensus 276 ~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 276 ELVEELIELALYARQEIN 293 (294)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 566777777777776653
No 340
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.51 E-value=3.3e-12 Score=124.73 Aligned_cols=287 Identities=19% Similarity=0.183 Sum_probs=175.5
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+....++....|++.++++.+.+..+.++||..|+..++..... ++|+|+..+..|.|.........
T Consensus 57 Y~R~~nPT~~~lE~~~a~LEg~~~~~afsSGmaAI~~~~l~ll~-----------~GD~vl~~~~~YG~t~~~~~~~l-- 123 (396)
T COG0626 57 YSRTGNPTRDALEEALAELEGGEDAFAFSSGMAAISTALLALLK-----------AGDHVLLPDDLYGGTYRLFEKIL-- 123 (396)
T ss_pred cccCCCccHHHHHHHHHHhhCCCcEEEecCcHHHHHHHHHHhcC-----------CCCEEEecCCccchHHHHHHHHH--
Confidence 45566777999999999999999999999999999998776652 68999999999866543332211
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
....-++.+++..|.+++++++.++++.+|++|+..++.--++. +++|+++|+++|+++|+|..+...
T Consensus 124 -------~~~gi~~~~~d~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~D----I~~i~~~A~~~g~~vvVDNTfatP- 191 (396)
T COG0626 124 -------QKFGVEVTFVDPGDDEALEAAIKEPNTKLVFLETPSNPLLEVPD----IPAIARLAKAYGALVVVDNTFATP- 191 (396)
T ss_pred -------HhcCeEEEEECCCChHHHHHHhcccCceEEEEeCCCCccccccc----HHHHHHHHHhcCCEEEEECCcccc-
Confidence 11223445555556777777776457899999987555444444 999999999999999999986532
Q ss_pred CCCccccccccCCcccEEE--ecccCCC-c-cceeeEEeCH-HHHhhccCCCC-cCCCCChHHHHHHHHHHHHHhcCchH
Q 012368 294 RTGYLWAHEHYGIFPDIMT--LAKPLAG-G-LPIGAALVTE-KVASAINYGDH-GSTFAGSPLVCNAAIAVLDKISNPAF 367 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~t--~sK~lg~-G-~~iG~v~~~~-~i~~~~~~~~~-~~t~~~~~~~~~aa~a~L~~~~~~~~ 367 (465)
..+..+....||++ .+|.++| + .=.|+++++. ++.+.+..... ......+|..+...+-.|+.+ .-.
T Consensus 192 -----~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkTL--~~R 264 (396)
T COG0626 192 -----VLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLRTL--ALR 264 (396)
T ss_pred -----cccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccchH--HHH
Confidence 12333344467774 6699998 4 6667777655 45444411111 111223555554444444322 122
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcee------------------eeccceEEEEEecCC--hHHHHHHHHHC-------
Q 012368 368 LASVSKKGHYFKETLKQKLARNPHVKD------------------VRGLGLIIGIEFDVS--ATPVVDACRDS------- 420 (465)
Q Consensus 368 ~~~~~~~~~~l~~~l~~~~~~~~~~~~------------------~~~~g~~~~i~~~~~--~~~~~~~l~~~------- 420 (465)
.++..++...+.+.| +.+|.+.. ..+.|.++.|++... ..+|.+.|.--
T Consensus 265 m~~~~~nA~~IA~~L----~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L~l~~~a~SlG 340 (396)
T COG0626 265 MERHNENALKIAEFL----ADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSLKLFKLAESLG 340 (396)
T ss_pred HHHHHHHHHHHHHHH----hcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhCCccEEeccCC
Confidence 344444444444433 34453322 225789999999442 23344333211
Q ss_pred Cc---eEeec---------------C-CCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 421 GL---LVLTA---------------G-KGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 421 Gv---~v~~~---------------~-~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
|+ +..|. | .++.+|+++.+. +++.+++-|+++++.+
T Consensus 341 gveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGlE----d~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 341 GVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGLE----DVEDLIADLEQALAKA 395 (396)
T ss_pred CcccccccccccCcccCCHhHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHHhh
Confidence 11 11110 1 146799987764 5566666677666543
No 341
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.51 E-value=1.1e-11 Score=122.64 Aligned_cols=331 Identities=14% Similarity=0.132 Sum_probs=187.6
Q ss_pred CEEEecccCcccccCCCCCHHHHHH-HHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKA-VVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFAR 176 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a-~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~ 176 (465)
.-|||+.+..++ +.+.++ +...+. +.- .+..++...+|++.+++++|.+.+++++||+.|...+..+
T Consensus 38 ~v~iDLltDsgT-------~aMs~~q~a~~~~-GDe--~yag~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l-- 105 (450)
T TIGR02618 38 DVYIDLLTDSGT-------NAMSDKQWAGLMM-GDE--AYAGSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQI-- 105 (450)
T ss_pred ceEEEcccCCCc-------HHHHHHHHHHhhh-cch--hhcCCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHh--
Confidence 468999987663 445555 333221 111 1234455789999999999999999999999998865322
Q ss_pred HHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCC-CCCCCceEeeC---CCHHHHHhhcCCC---CeEE
Q 012368 177 KFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFE-PVMPGVNFVEY---GNIEATRKLIQPG---KTAA 249 (465)
Q Consensus 177 ~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~d~~~le~~l~~~---~~a~ 249 (465)
..+ +++.| ..+.|...+...+...+......... ..... ...|+ -|+++|+++|++. .++.
T Consensus 106 -~l~--------pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~-~~~p~~GniD~~~Le~aI~~~~~~~~~l 173 (450)
T TIGR02618 106 -AIK--------PGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQ-LNIPFKGNVDLKKLQKLIDEVGADKIPY 173 (450)
T ss_pred -CCC--------CcCEE--CCceeHHHHHHHHHhCCeEEEeeecccccccc-cCCCCCCCcCHHHHHHHhccccCcccCc
Confidence 121 56655 55555343333222222211100000 00000 00111 1899999999842 2334
Q ss_pred EE-EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC-----------CCCccc---cccccCCcccEEEec
Q 012368 250 VF-VEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG-----------RTGYLW---AHEHYGIFPDIMTLA 314 (465)
Q Consensus 250 vi-~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g-----------r~g~~~---~~~~~~~~pdi~t~s 314 (465)
|. +.++|..|| .+.+.+.+++|+++|++||+.||.|-++. ++ ..+... ..+.+ -..|.+++|
T Consensus 174 V~~e~t~N~~GG-~pvs~~~l~~I~elA~~~Gl~vi~DaAR~-~gNA~~I~~re~g~~~~~i~ei~~e~~-~~aD~~~~S 250 (450)
T TIGR02618 174 ICLAVTVNLAGG-QPVSMANMREVRELCEAHGIKVFYDATRC-VENAYFIKEREQGYEDKSIAEILKEMM-SYADGCTMS 250 (450)
T ss_pred eEEEEecccCCC-eeCCHHHHHHHHHHHHHcCCEEEEEccch-hhChhhhhcccccccCCCHHHHHHHHh-ccCcEEEEe
Confidence 44 444444445 56688899999999999999999999875 21 111100 00000 124665554
Q ss_pred ccC-CCccceeeEEe--CHHHHhhccCC--C--CcCCCCC-hHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Q 012368 315 KPL-AGGLPIGAALV--TEKVASAINYG--D--HGSTFAG-SPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKL 386 (465)
Q Consensus 315 K~l-g~G~~iG~v~~--~~~i~~~~~~~--~--~~~t~~~-~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~ 386 (465)
+. .+|.|+|.+++ ++++++.++.. . ...|+++ ..-.+.|...+|+...+..+.++-....++|.+.|.+.
T Consensus 251 -~~Kd~~~~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~~- 328 (450)
T TIGR02618 251 -GKKDCLVNIGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYIEHRVKQVRYLGDKLKAA- 328 (450)
T ss_pred -eccCCCCCCceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHC-
Confidence 33 23446555554 67887776542 1 1223433 22244454555665545566666666778888888775
Q ss_pred HcCCCceeeeccceEEEEEec----------CChHHHHHHHH-HCCceEeecC-----------C-----CCEEEEecC-
Q 012368 387 ARNPHVKDVRGLGLIIGIEFD----------VSATPVVDACR-DSGLLVLTAG-----------K-----GNVVRLVPP- 438 (465)
Q Consensus 387 ~~~~~~~~~~~~g~~~~i~~~----------~~~~~~~~~l~-~~Gv~v~~~~-----------~-----~~~lRi~~~- 438 (465)
..|++. +..|..+.++.. -++..++.+|. +.||--.-.| . -..+|+.+|
T Consensus 329 -Gvpv~~--p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaipr 405 (450)
T TIGR02618 329 -GVPIVE--PVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPR 405 (450)
T ss_pred -CCcccC--CCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeecccc
Confidence 444422 345666666652 24566777765 4455432111 0 145898876
Q ss_pred CCCcHHHHHHHHHHHHHHHHHh
Q 012368 439 LIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 439 ~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
-+-|.+++|...++|..+.++.
T Consensus 406 r~yt~~h~~~v~~~~~~~~~~~ 427 (450)
T TIGR02618 406 RVYTYAHMDVVADGIIKLYKHR 427 (450)
T ss_pred ccccHhHHHHHHHHHHHHHhhH
Confidence 3458999999999998877653
No 342
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.50 E-value=1.9e-11 Score=121.21 Aligned_cols=333 Identities=14% Similarity=0.133 Sum_probs=183.5
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARK 177 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~ 177 (465)
.-|||+.+..++ +...++...++..+.- .+..++...+|++.+++++|.+.+++++||+.|+.+++.+..
T Consensus 45 ~v~IDLlSDS~T-------~aMs~~q~a~~~vGDd--~Yagd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v- 114 (460)
T PRK13237 45 DVYIDLLTDSGT-------NAMSDRQWAGMMIGDE--AYAGSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAI- 114 (460)
T ss_pred cEEEECcccCCc-------hhccHHHHHHHhhcch--hhcCCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCC-
Confidence 468999998764 2233442333322111 123345578899999999999999999999999998644221
Q ss_pred HhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCC-C-CCCCC-ceEeeCC-CHHHHHhhcCCC---CeEEE
Q 012368 178 FQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPF-E-PVMPG-VNFVEYG-NIEATRKLIQPG---KTAAV 250 (465)
Q Consensus 178 ~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~-~-~~~~~-~~~~~~~-d~~~le~~l~~~---~~a~v 250 (465)
+ +++.| ....+...+...+...+.. +.... . ...+. .....++ |+++|+++|++. .++.+
T Consensus 115 --~--------pGd~V--p~n~~f~Tt~ahI~~~Ga~-fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV 181 (460)
T PRK13237 115 --K--------PGQYV--PGNMYFTTTRYHQELNGGI-FVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYI 181 (460)
T ss_pred --C--------CcCEE--CCccchHhhHHHHHhCCcE-EEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCce
Confidence 1 45643 2222222222212222211 11000 0 00000 0001111 899999999732 23333
Q ss_pred -EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC-----------CCCcccc--ccccCCcccEEEec--
Q 012368 251 -FVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG-----------RTGYLWA--HEHYGIFPDIMTLA-- 314 (465)
Q Consensus 251 -i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g-----------r~g~~~~--~~~~~~~pdi~t~s-- 314 (465)
++.++|..|| .+.+.+.+++|.++|++||+.||.|-++. +| +.|.... .....-.-|++|||
T Consensus 182 ~a~itvn~~GG-qpvs~~~m~~I~elA~~~Gl~Vi~DaAra-~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~ 259 (460)
T PRK13237 182 CLAVTVNLAGG-QPVSMANMRAVRELCDKHGIKVFFDATRC-VENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGK 259 (460)
T ss_pred EEEEecccCCC-eeCCHHhHHHHHHHHHHcCCEEEEECcch-hcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCC
Confidence 3444555545 45677889999999999999999999875 32 1111000 00001135788776
Q ss_pred ccCCCccceeeEEe-CHHHHhhccCC----CCcCCCCChHH-HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHc
Q 012368 315 KPLAGGLPIGAALV-TEKVASAINYG----DHGSTFAGSPL-VCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLAR 388 (465)
Q Consensus 315 K~lg~G~~iG~v~~-~~~i~~~~~~~----~~~~t~~~~~~-~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 388 (465)
|.++.+. .|+++. ++++.+.++.. ....||++-.- -+.|....|....+.++.++-.+..++|.+.|.+. .
T Consensus 260 K~~~~~~-GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~~~y~~~ri~~~~~l~~~L~~~--G 336 (460)
T PRK13237 260 KDCLVNI-GGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQYEYIEHRVGQVRYLGEKLLAA--G 336 (460)
T ss_pred CCCCCCC-ceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhchHHHHHHHHHHHHHHHHHHHHC--C
Confidence 6555422 366665 46777776543 12335544322 34444444554445566666666777777777663 4
Q ss_pred CCCceeeeccceEEEEEec----------CChHHHHHHHH-HCCceEeec-----------CC-----CCEEEEecC-CC
Q 012368 389 NPHVKDVRGLGLIIGIEFD----------VSATPVVDACR-DSGLLVLTA-----------GK-----GNVVRLVPP-LI 440 (465)
Q Consensus 389 ~~~~~~~~~~g~~~~i~~~----------~~~~~~~~~l~-~~Gv~v~~~-----------~~-----~~~lRi~~~-~~ 440 (465)
.|++. +..|.-+.++.. -++..++.+|. +.||--.-. +. -..+|+.+| -+
T Consensus 337 vpv~~--p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~ 414 (460)
T PRK13237 337 VPIVE--PVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRV 414 (460)
T ss_pred Cceec--CCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeecccccc
Confidence 44432 333444445431 24566777765 445543211 00 145898876 34
Q ss_pred CcHHHHHHHHHHHHHHHHHh
Q 012368 441 ISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 441 ~t~e~i~~~l~~l~~~l~~~ 460 (465)
-|.+++|...++|..+.++.
T Consensus 415 yt~~h~~~v~~~~~~~~~~~ 434 (460)
T PRK13237 415 YTYAHMDVVADSVIKLYKHR 434 (460)
T ss_pred ccHHHHHHHHHHHHHHHHhH
Confidence 58999999999998877653
No 343
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.50 E-value=7.8e-12 Score=126.02 Aligned_cols=165 Identities=17% Similarity=0.141 Sum_probs=110.5
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+.....+...++++.+++..+.+..++++||++|+.+++..+. .++++||+....|++.........
T Consensus 63 Y~r~~~pt~~~le~~la~l~g~~~~v~fsSG~~Ai~~al~~ll-----------~~Gd~VI~~~~~y~~t~~~~~~~l-- 129 (437)
T PRK05613 63 YSRLTNPTVEALENRIASLEGGVHAVAFASGQAAETAAILNLA-----------GAGDHIVTSPRLYGGTETLFLVTL-- 129 (437)
T ss_pred eeCccChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhc-----------CCCCEEEECCCccHHHHHHHHHHH--
Confidence 4455677789999999999987788888889999998887553 168899998888866532111100
Q ss_pred CCcCCCCCCCCCCceEee-CCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 214 EHYRSPFEPVMPGVNFVE-YGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~-~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
......+.+++ ..|++++++++++ ++++|++|...++.|.+.+ +++|+++|+++|+++|+|.++..
T Consensus 130 -------~~~Gi~v~~vd~~~d~e~l~~~l~~-~tk~V~~e~~~Np~~~v~d----i~~I~~la~~~gi~livD~t~a~- 196 (437)
T PRK05613 130 -------NRLGIEVTFVENPDDPESWQAAVQP-NTKAFFGETFANPQADVLD----IPAVAEVAHRNQVPLIVDNTIAT- 196 (437)
T ss_pred -------HhcCeEEEEECCCCCHHHHHHhCCc-cCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCeEEEECCCcc-
Confidence 01112344443 3479999999986 4667777765555556666 99999999999999999999852
Q ss_pred CCCCccccccccCCcccEEEec--ccCCC-ccce-eeEEeC
Q 012368 293 GRTGYLWAHEHYGIFPDIMTLA--KPLAG-GLPI-GAALVT 329 (465)
Q Consensus 293 gr~g~~~~~~~~~~~pdi~t~s--K~lg~-G~~i-G~v~~~ 329 (465)
+.. +.......|++++| |.++| |--+ |+++.+
T Consensus 197 g~~-----~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~ 232 (437)
T PRK05613 197 AAL-----VRPLELGADVVVASLTKFYTGNGSGLGGVLIDG 232 (437)
T ss_pred ccc-----cChHHhCCCEEEeeccceecCCCcceeEEEEec
Confidence 111 11112235777655 99987 5444 444433
No 344
>PLN02590 probable tyrosine decarboxylase
Probab=99.46 E-value=1.3e-10 Score=119.25 Aligned_cols=311 Identities=13% Similarity=0.083 Sum_probs=177.8
Q ss_pred CHHHHHHHHHHHhhcC-CC--------eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCcccccc
Q 012368 139 SIPQIELAKRLVACSF-AD--------RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALA 209 (465)
Q Consensus 139 ~~~~~~la~~l~~~~~-~~--------~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~ 209 (465)
...+.++.++|++.++ ++ .-+|++||+|||..|+.+||........... ..+-+++.+..-|-+..-+..
T Consensus 169 t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~-~~~~vvy~S~~aH~Sv~KAa~ 247 (539)
T PLN02590 169 TELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTL-LPQLVVYGSDQTHSSFRKACL 247 (539)
T ss_pred HHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccC-CCCEEEEecCCchHHHHHHHH
Confidence 3447778888888887 33 2678999999999999999875321110000 112355555555655544443
Q ss_pred ccCCCCcCCCCCCCCCCceEeeC-------CCHHHHHhhcCC-----CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHH
Q 012368 210 LTSKEHYRSPFEPVMPGVNFVEY-------GNIEATRKLIQP-----GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACD 277 (465)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~-----~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~ 277 (465)
+.+-.. ..+..+|. -|+++|+++|+. ..+.+|+..--..+.|.+-| |++|.++|+
T Consensus 248 ilGlg~---------~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp----l~~Ia~i~~ 314 (539)
T PLN02590 248 IGGIHE---------ENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP----LVPLGNIAK 314 (539)
T ss_pred HcCCCc---------ccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC----HHHHHHHHH
Confidence 322211 11112221 178999999852 12344554444444566544 999999999
Q ss_pred HhCCEEEEeccccCCCCCCccccccccCC-cccEEEec--ccCCCccceeeEEeCHH--HHhhccCC----CC-------
Q 012368 278 DAGALLVFDEVQCGLGRTGYLWAHEHYGI-FPDIMTLA--KPLAGGLPIGAALVTEK--VASAINYG----DH------- 341 (465)
Q Consensus 278 ~~g~llI~DEv~~g~gr~g~~~~~~~~~~-~pdi~t~s--K~lg~G~~iG~v~~~~~--i~~~~~~~----~~------- 341 (465)
+||++|++|-+|.|+...-...-.-..++ ..|-+++. |.+...+..|.++.+.. +.+.+... ..
T Consensus 315 ~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~ 394 (539)
T PLN02590 315 KYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDT 394 (539)
T ss_pred HhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCccccccc
Confidence 99999999999987632211111111243 36777764 99988899999988753 22222100 00
Q ss_pred ---cC--CC-CChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeec-cceEEEEEecC---C--
Q 012368 342 ---GS--TF-AGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRG-LGLIIGIEFDV---S-- 409 (465)
Q Consensus 342 ---~~--t~-~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~g~~~~i~~~~---~-- 409 (465)
.. +. .+-.+.......+|+.+..+.+.+.+++..+ +.+.+.+.+.+.+.+.-+.. .=.++.|.+.. .
T Consensus 395 ~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~-lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~~~~~ 473 (539)
T PLN02590 395 VVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVN-LAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDGDED 473 (539)
T ss_pred CCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCeEEecCCceEEEEEEecCCCCCHH
Confidence 00 11 1223445555666776656665555444332 23344444445553332221 22223333311 1
Q ss_pred -----hHHHHHHHHHCCceEe-ecC--CCCEEEEec-CCCCcHHHHHHHHHHHHHHHHHhhhcC
Q 012368 410 -----ATPVVDACRDSGLLVL-TAG--KGNVVRLVP-PLIISEQELDQAVEILCKTLPVLDSNS 464 (465)
Q Consensus 410 -----~~~~~~~l~~~Gv~v~-~~~--~~~~lRi~~-~~~~t~e~i~~~l~~l~~~l~~~~~~~ 464 (465)
..++.+.|.+.|.... +.. ...++|+++ +..+++++++.+++.|.+...++.+++
T Consensus 474 ~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~~~~ 537 (539)
T PLN02590 474 QCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFTRND 537 (539)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhcccC
Confidence 1356666777776543 321 125789876 566789999999999999988887654
No 345
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.45 E-value=1.2e-11 Score=119.31 Aligned_cols=196 Identities=16% Similarity=0.146 Sum_probs=138.9
Q ss_pred cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 134 SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 134 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
+....++....+++.+++..+...++.++||..|+..|++... +.+++|+.++..|.|..........
T Consensus 71 Ysr~~nPt~~~le~~iaal~ga~~~l~fsSGmaA~~~al~~L~-----------~~g~~iV~~~~~Y~gT~~~l~~~~~- 138 (409)
T KOG0053|consen 71 YSRSGNPTRDVLESGIAALEGAAHALLFSSGMAAITVALLHLL-----------PAGDHIVATGDVYGGTLRILRKFLP- 138 (409)
T ss_pred cccCCCCchHHHHHHHHHHhCCceEEEecccHHHHHHHHHHhc-----------CCCCcEEEeCCCcccHHHHHHHHHH-
Confidence 3455667788899999999998889999999999999999776 2688999999999776533222110
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
.......++...|++.+++++++ ++.+|++|..-++...++. +++|+++|+++|+++|+|+...++
T Consensus 139 --------~~gie~~~vd~~~~~~~~~~i~~-~t~~V~~ESPsNPll~v~D----I~~l~~la~~~g~~vvVDnTf~~p- 204 (409)
T KOG0053|consen 139 --------KFGGEGDFVDVDDLKKILKAIKE-NTKAVFLESPSNPLLKVPD----IEKLARLAHKYGFLVVVDNTFGSP- 204 (409)
T ss_pred --------HhCceeeeechhhHHHHHHhhcc-CceEEEEECCCCCcccccc----HHHHHHHHhhCCCEEEEeCCcCcc-
Confidence 11123345555678888888876 6889999987555544444 999999999999999999986543
Q ss_pred CCCccccccccCCcccEEE--ecccCCC-c-cceeeEEeC-HHHHhhccCCCCcCCCCChHHHHHHHHHHHH
Q 012368 294 RTGYLWAHEHYGIFPDIMT--LAKPLAG-G-LPIGAALVT-EKVASAINYGDHGSTFAGSPLVCNAAIAVLD 360 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~t--~sK~lg~-G-~~iG~v~~~-~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~ 360 (465)
..++......||++ .+|.++| + .=.|.++.+ +++...+........++.+|+.+.-....++
T Consensus 205 -----~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglk 271 (409)
T KOG0053|consen 205 -----YNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGLK 271 (409)
T ss_pred -----cccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCcc
Confidence 23444445578885 5699998 3 667888885 7777766543333445667776665444443
No 346
>PLN02263 serine decarboxylase
Probab=99.44 E-value=1.3e-10 Score=116.28 Aligned_cols=282 Identities=14% Similarity=0.127 Sum_probs=171.0
Q ss_pred HHHHHHHHHhhcC-CC---eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcC
Q 012368 142 QIELAKRLVACSF-AD---RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYR 217 (465)
Q Consensus 142 ~~~la~~l~~~~~-~~---~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 217 (465)
+.++.+++++.++ ++ .-.+|+||||||..|+.++|.+. .+.+++.+..-|-+..-+..+-+-....
T Consensus 135 E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~----------~~~vvy~S~~aH~Sv~KAa~llgi~~~~ 204 (470)
T PLN02263 135 EVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVF----------PDGILYASRESHYSVFKAARMYRMECVK 204 (470)
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhc----------CCcEEEEcCCccHHHHHHHHhcCCcceE
Confidence 6778888888887 22 47899999999999999999753 2336666666676655444433322111
Q ss_pred CCCCCCCCCceEeeCCCHHHHHhhcCCCC--eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCC-----EEEEecccc
Q 012368 218 SPFEPVMPGVNFVEYGNIEATRKLIQPGK--TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGA-----LLVFDEVQC 290 (465)
Q Consensus 218 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~--~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~-----llI~DEv~~ 290 (465)
.|...... -|+++|+++|..+. +.+|+..--..+.|.+-| +++|.++|++||+ +|++|-++.
T Consensus 205 ---Vp~d~~g~----mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp----i~eIa~i~~~~g~~~~~iwlHVDAA~G 273 (470)
T PLN02263 205 ---VDTLVSGE----IDCADFKAKLLANKDKPAIINVNIGTTVKGAVDD----LDLVIKTLEECGFSQDRFYIHCDGALF 273 (470)
T ss_pred ---eccCCCCc----CcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC----HHHHHHHHHHcCCccCCeeEEEeccch
Confidence 11111111 18999999886332 445544443334465544 9999999999997 999999998
Q ss_pred CCCC----CCccccccccCCcccEEEec--ccCCCccceeeEEeCHHHHhhccCC-----CCcCCCCCh--HHHHHHHHH
Q 012368 291 GLGR----TGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAINYG-----DHGSTFAGS--PLVCNAAIA 357 (465)
Q Consensus 291 g~gr----~g~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~~~-----~~~~t~~~~--~~~~~aa~a 357 (465)
|+-. .-..+ + +....|-++++ |.++..++.|.++.++..++.+... ....|..++ ........+
T Consensus 274 G~~lPf~~~~~~~--d-f~~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~ 350 (470)
T PLN02263 274 GLMMPFVKRAPKV--T-FKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWY 350 (470)
T ss_pred hhHhhhccccccc--C-CCcCccEEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHH
Confidence 7521 10011 1 11236667765 8888889999999997665444221 011122222 123455566
Q ss_pred HHHHhcCchHHHHHH---HHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCChHHHHHHHHHCCceEeecCCCCEEE
Q 012368 358 VLDKISNPAFLASVS---KKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVR 434 (465)
Q Consensus 358 ~L~~~~~~~~~~~~~---~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~~~~lR 434 (465)
+|+.+..+++.+.++ ++.+++.+.|++ .+.........+.+.+.. +.. .+..+|..+...+ +.++
T Consensus 351 ~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~----~g~~~~~~p~s~~V~f~~--p~~----~~~~~gW~L~~~~--~~~H 418 (470)
T PLN02263 351 TLNRKGYRGFQKEVQKCLRNAHYLKDRLRE----AGISAMLNELSSTVVFER--PKD----EEFVRRWQLACQG--NIAH 418 (470)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHHHh----CCCeEEeCCCceEEEEec--Cch----HHhhcceEEccCC--CcEE
Confidence 777666555555444 344555555544 343333334444444432 221 1235677666543 5688
Q ss_pred EecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 435 LVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 435 i~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
+.+...++.+.+|++++.|++..+.
T Consensus 419 ivvmphv~~~~id~fi~DL~~~~~~ 443 (470)
T PLN02263 419 VVVMPSVTIEKLDYFLKELVEKRST 443 (470)
T ss_pred EEEcCCCCHHHHHHHHHHHHHHHhh
Confidence 8776667889999999999887764
No 347
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.39 E-value=1.6e-10 Score=103.80 Aligned_cols=290 Identities=17% Similarity=0.183 Sum_probs=175.1
Q ss_pred CHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCC
Q 012368 139 SIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRS 218 (465)
Q Consensus 139 ~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~ 218 (465)
.++...+-+.|++++|.|.+.+|+|.-||-..+|..+. ..+..++.+..-|-.+..+....+......
T Consensus 60 kPpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal~------------~~gd~vV~D~~aHYttyvAAEragl~v~eV 127 (382)
T COG1103 60 KPPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHALC------------KEGDWVVVDSLAHYTTYVAAERAGLNVAEV 127 (382)
T ss_pred CCcHHHHHHHHHHHhCCceeeecccchhhHHHHHHHhc------------cCCCEEEEcCcchHHHHHHHHhcCCeEEec
Confidence 34466777789999999999999999999998888666 244566677777766655544333322221
Q ss_pred CCCCCCCCceEeeCCCHHHHHhhc----C--CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 219 PFEPVMPGVNFVEYGNIEATRKLI----Q--PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 219 ~~~~~~~~~~~~~~~d~~~le~~l----~--~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
+- ...|.... ++|...+.| + .+.+++.++..+.++-|.+.. -++++++|+++|+.++..-+|+ .
T Consensus 128 p~-tg~Pey~i----~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D----akkva~ic~e~gvPlllN~AYt-~ 197 (382)
T COG1103 128 PN-TGYPEYKI----TPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD----AKKVAKICREYGVPLLLNCAYT-V 197 (382)
T ss_pred CC-CCCCceEe----cHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchh----hHHHHHHHHHcCCceEeeccee-e
Confidence 11 11122222 444444444 3 245777788888888887765 7899999999999999999998 5
Q ss_pred CCCCccccccccCCcccEEEec--ccCCCccceeeEEeCHHHHhhccCCC-----------CcCCCCChHHHHHHHHHHH
Q 012368 293 GRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAINYGD-----------HGSTFAGSPLVCNAAIAVL 359 (465)
Q Consensus 293 gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~~~~-----------~~~t~~~~~~~~~aa~a~L 359 (465)
||.. .....+.+|.++-| |++++.-|+|.+..++++.+..-... .+-|--+.|+.. ..|++
T Consensus 198 Grmp----vs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivT--lmASf 271 (382)
T COG1103 198 GRMP----VSGKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVT--LMASF 271 (382)
T ss_pred cccc----ccccccCCCEEEecCccchhccCCeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHH--HHhcC
Confidence 5542 33345678988776 88987679999999998877653221 122222333221 12222
Q ss_pred HHh-cCchHHHHHHHHHHHHHHHHHHHH--HcCCCceeeeccceEEEEEec----------CChHHHHHHHHHCCceEee
Q 012368 360 DKI-SNPAFLASVSKKGHYFKETLKQKL--ARNPHVKDVRGLGLIIGIEFD----------VSATPVVDACRDSGLLVLT 426 (465)
Q Consensus 360 ~~~-~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~g~~~~i~~~----------~~~~~~~~~l~~~Gv~v~~ 426 (465)
-.. ++-..++.=-+..+++.+.|+++- .+++. .+.. --++.++.+ ...--+.+.|.++||.-..
T Consensus 272 P~V~eRVkrWdeEv~kaR~fv~elEkigg~~qlG~--rPk~-HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~ 348 (382)
T COG1103 272 PHVVERVKRWDEEVEKARWFVAELEKIGGVKQLGE--RPKN-HDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQ 348 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhCC--CCcc-cceeeecCchHHHHHHhCcCCceeeHHHHHhcCccccc
Confidence 211 111111222234556666666652 12211 1111 112223321 0111256788899987443
Q ss_pred cCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 427 AGKGNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 427 ~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
.|.-.++.++ -+..+.|+++..++++++++++.
T Consensus 349 ~G~Tk~~K~s-vyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 349 PGQTKYFKLS-VYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred cCceeEEEEE-eecCCHHHHHHHHHHHHHHHHhc
Confidence 3332567776 45779999999999999988753
No 348
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.38 E-value=2.8e-10 Score=116.88 Aligned_cols=300 Identities=16% Similarity=0.129 Sum_probs=163.3
Q ss_pred CHHHHHHHHHHHhhcC-C--------------CeEEecCCHHHHHHHHHHHHHHHhhhcC-----CC-C--------CCC
Q 012368 139 SIPQIELAKRLVACSF-A--------------DRVFFSNTGTEANEAAIKFARKFQRHSN-----PD-S--------KEP 189 (465)
Q Consensus 139 ~~~~~~la~~l~~~~~-~--------------~~v~~~~sG~eA~~~al~~a~~~t~~~~-----~~-~--------~~~ 189 (465)
+..+..+.++|++.++ . ..-.||+|||+||..|+.+||....... .. + ...
T Consensus 128 t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~ 207 (522)
T TIGR03799 128 TPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGY 207 (522)
T ss_pred HHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccC
Confidence 3446677777777653 1 2357899999999999999997532100 00 0 001
Q ss_pred CceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCC-----CHHHHHhhcC----CC-CeEEEEEcccCCCC
Q 012368 190 ATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYG-----NIEATRKLIQ----PG-KTAAVFVEPIQGEG 259 (465)
Q Consensus 190 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~----~~-~~a~vi~ep~~~~~ 259 (465)
.+.+|+.+..-|.+..-+....+... ..+..+|.+ |+++|+++|+ .+ .+.+|+........
T Consensus 208 ~~~~v~~S~~~H~S~~kaa~~lglg~---------~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~t 278 (522)
T TIGR03799 208 DGLAILVSERGHYSLGKAADVLGIGR---------DNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTET 278 (522)
T ss_pred CceEEEECCCchHHHHHHHHHcCCCc---------ccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCC
Confidence 23355555566666543333222110 112223322 7899999885 22 23344443444567
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCC-cccEEEec--ccCCCccceeeEEeC-HHHHhh
Q 012368 260 GIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGI-FPDIMTLA--KPLAGGLPIGAALVT-EKVASA 335 (465)
Q Consensus 260 G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~-~pdi~t~s--K~lg~G~~iG~v~~~-~~i~~~ 335 (465)
|.+.| +++|.++|++||+++++|-+|.|.......+-....++ ..|.++++ |.+.+.+.+|+++.+ ++..+.
T Consensus 279 GaiDp----l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~ 354 (522)
T TIGR03799 279 GNIDP----LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALMSA 354 (522)
T ss_pred CCcCC----HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHHHH
Confidence 77776 99999999999999999999875411110000012344 57999887 888887889999886 455554
Q ss_pred ccCC--C---Cc------CCCCCh-HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeee-ccceEE
Q 012368 336 INYG--D---HG------STFAGS-PLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVR-GLGLII 402 (465)
Q Consensus 336 ~~~~--~---~~------~t~~~~-~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~g~~~ 402 (465)
+... . .+ .++.++ +.......++|+.+....+ +.+.+..-.+.+.+.+.+.+.|.+..+. +.-.++
T Consensus 355 ~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~-~~ii~~~~~la~~l~~~L~~~~~~el~~~p~l~iv 433 (522)
T TIGR03799 355 IEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGY-ELLIDQSIEKAKYFADLIQQQPDFELVTEPELCLL 433 (522)
T ss_pred hccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhHHHH-HHHHHHHHHHHHHHHHHHhhCCCeEEecCCCccEE
Confidence 4331 0 00 122222 2222245566776655442 3333334444444444444454333222 112233
Q ss_pred EEEe-cC-----------------C------hHHHHHHHHHCCceEeecC---------CC-CEEEEec-CCCCcHHHHH
Q 012368 403 GIEF-DV-----------------S------ATPVVDACRDSGLLVLTAG---------KG-NVVRLVP-PLIISEQELD 447 (465)
Q Consensus 403 ~i~~-~~-----------------~------~~~~~~~l~~~Gv~v~~~~---------~~-~~lRi~~-~~~~t~e~i~ 447 (465)
.+.+ +. . ..++.+.+.+.|..+.... .+ .++|+++ +..+|+++|+
T Consensus 434 ~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~ 513 (522)
T TIGR03799 434 TYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQ 513 (522)
T ss_pred EEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHH
Confidence 3333 10 0 0245556667786654311 11 3589876 5667888888
Q ss_pred HHHHH
Q 012368 448 QAVEI 452 (465)
Q Consensus 448 ~~l~~ 452 (465)
.+++.
T Consensus 514 ~~l~~ 518 (522)
T TIGR03799 514 DILDE 518 (522)
T ss_pred HHHHH
Confidence 87653
No 349
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.37 E-value=2.1e-10 Score=108.92 Aligned_cols=304 Identities=14% Similarity=0.110 Sum_probs=165.1
Q ss_pred HHHHHHHHHHHhhcC--CCeEEecCCHH-HHHHHHHHHHHHHhhhc--CCCCCCCCceEEEEcCCcccCccccccccCCC
Q 012368 140 IPQIELAKRLVACSF--ADRVFFSNTGT-EANEAAIKFARKFQRHS--NPDSKEPATEFVSFTNSFHGRTMGALALTSKE 214 (465)
Q Consensus 140 ~~~~~la~~l~~~~~--~~~v~~~~sG~-eA~~~al~~a~~~t~~~--~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~ 214 (465)
....++++..++.++ .++|+...+.+ +-+.-++..+..+...- .++...++-+.|.+.|+|-.+.......+
T Consensus 69 ~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~G--- 145 (425)
T PF12897_consen 69 DGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFG--- 145 (425)
T ss_dssp S--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT---
T ss_pred CChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhC---
Confidence 335566777777776 66666654444 33334444444332211 12211346789999999965543322221
Q ss_pred CcCCCCCCCCCCceEeeC----CCHHHHHhhcC-CCCeEEEEEcccCCCCCcccCCHHHHHHHHHH-HHHhCCEEEEecc
Q 012368 215 HYRSPFEPVMPGVNFVEY----GNIEATRKLIQ-PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDA-CDDAGALLVFDEV 288 (465)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~----~d~~~le~~l~-~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~~g~llI~DEv 288 (465)
-+...+|. +|++.+|+++. ...++.++|-|..+|+..+.++.+..++|+.+ +...|..++.|.+
T Consensus 146 ----------iemi~VpM~~dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNA 215 (425)
T PF12897_consen 146 ----------IEMIPVPMTEDGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNA 215 (425)
T ss_dssp -----------EEEEEEEETTEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-T
T ss_pred ----------cEEEecCCCCCCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecC
Confidence 12222332 28999999995 56899999999888877788999999999998 4468999999999
Q ss_pred ccCCCCCCc---cc------cccccCCcccE----EEecccCCCccceeeEEeCHHHHhhccCCCCcCCCCChHHHHHHH
Q 012368 289 QCGLGRTGY---LW------AHEHYGIFPDI----MTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAA 355 (465)
Q Consensus 289 ~~g~gr~g~---~~------~~~~~~~~pdi----~t~sK~lg~G~~iG~v~~~~~i~~~~~~~~~~~t~~~~~~~~~aa 355 (465)
|.=--.++. .- .....| .||. .+.||.--.|-.++++.++++-++.+.......|.+.+-+.|..-
T Consensus 216 Y~vHhL~~~~~~~~~~nil~~~~~AG-npdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRH 294 (425)
T PF12897_consen 216 YAVHHLYDEEPRDALLNILDACAKAG-NPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQTIGPDKVNQLRH 294 (425)
T ss_dssp TTT-BSSSSSS------HHHHHHHTT--TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH-S---HHHHHHH
T ss_pred ceEeeccccccchhhhHHHHHHHHcC-CCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcCceeCccHHHHHHH
Confidence 862101111 00 001112 3443 367897666778999999988877776433345666777888776
Q ss_pred HHHHHHhcCchHHHHHHHHHHHHHH-------HHHHHHH-cCCCceee-eccceEEEEEe-cCChHHHHHHHHHCCceEe
Q 012368 356 IAVLDKISNPAFLASVSKKGHYFKE-------TLKQKLA-RNPHVKDV-RGLGLIIGIEF-DVSATPVVDACRDSGLLVL 425 (465)
Q Consensus 356 ~a~L~~~~~~~~~~~~~~~~~~l~~-------~l~~~~~-~~~~~~~~-~~~g~~~~i~~-~~~~~~~~~~l~~~Gv~v~ 425 (465)
...+...+ .++.++.++..+.++- .|++.+. ..++.... +.-|.|++++. +..+.++.+.+.+.||.+.
T Consensus 295 vrff~d~~-gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G~AkrvV~lakeAGV~LT 373 (425)
T PF12897_consen 295 VRFFKDAE-GGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDGTAKRVVELAKEAGVALT 373 (425)
T ss_dssp HHHHHSHH-THHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT-HHHHHHHHHHTTEE--
T ss_pred HHHhcChh-hHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCChHHHHHHHHHHhCceeC
Confidence 66666321 1555666555554443 3333344 33333333 33467777877 5678899999999999998
Q ss_pred ecCC---------CCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 426 TAGK---------GNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 426 ~~~~---------~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
+.|. ...|||.|++- +.+|++.+++.+.-+++-
T Consensus 374 ~AGAtfPyg~DP~D~nIRiAPS~P-~leel~~Am~~~~~cv~l 415 (425)
T PF12897_consen 374 PAGATFPYGKDPRDSNIRIAPSYP-SLEELETAMDVFATCVKL 415 (425)
T ss_dssp -TTTTSGGG--TTS-EEEE--SSS--HHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCcEEecCCCC-CHHHHHHHHHHHHHHHHH
Confidence 8641 46799998866 788999999988776653
No 350
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.33 E-value=2.1e-10 Score=108.03 Aligned_cols=291 Identities=13% Similarity=0.090 Sum_probs=170.9
Q ss_pred HHHHHHHHHhhcC----CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcC
Q 012368 142 QIELAKRLVACSF----ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYR 217 (465)
Q Consensus 142 ~~~la~~l~~~~~----~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 217 (465)
+..+|+.|.++-| ++.|++|.|.+.|+...++++..- +++.|+++-|-|+-++......++...
T Consensus 119 R~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~----------~~~GvliPiPQYPLYsAti~l~~~~~v-- 186 (475)
T KOG0258|consen 119 RKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAG----------KKTGVLIPIPQYPLYSATISLLGGTQV-- 186 (475)
T ss_pred HHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcC----------CCCceEeecCCCchhHHHHHHhCCccc--
Confidence 7778888877765 779999999999999999988742 578899999999877654433333221
Q ss_pred CCCCCCCCCceEeeCCCHHHHHhhcC----C-CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC-
Q 012368 218 SPFEPVMPGVNFVEYGNIEATRKLIQ----P-GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG- 291 (465)
Q Consensus 218 ~~~~~~~~~~~~~~~~d~~~le~~l~----~-~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g- 291 (465)
++.-.....+- -|.++|++.++ . +..++|+++|-|++|- +.+++-+++|..+|.+++++|+.||||..
T Consensus 187 -~YyLdEe~~W~---ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGq--vls~e~ie~i~~fa~~~~l~llaDEVYQ~N 260 (475)
T KOG0258|consen 187 -PYYLDEESNWS---LDVAELERSVDEARKGINPRALVVINPGNPTGQ--VLSEENIEGIICFAAEEGLVLLADEVYQDN 260 (475)
T ss_pred -ceeeccccCCC---CCHHHHHHHHHHHhccCCceEEEEECCCCccch--hhcHHHHHHHHHHHHHcCeEEechHHHHhh
Confidence 11100111111 26777777765 1 2467899999998874 45899999999999999999999999876
Q ss_pred CCCCC-ccccccc----cC-Cccc---EE---EecccCCC--ccceeeEEe---CHHHHhhccCCCCcCCCCChHHHHHH
Q 012368 292 LGRTG-YLWAHEH----YG-IFPD---IM---TLAKPLAG--GLPIGAALV---TEKVASAINYGDHGSTFAGSPLVCNA 354 (465)
Q Consensus 292 ~gr~g-~~~~~~~----~~-~~pd---i~---t~sK~lg~--G~~iG~v~~---~~~i~~~~~~~~~~~t~~~~~~~~~a 354 (465)
....+ ++.++.. .+ -.+| +. +.||++.| |.|.|++=. .+++.+.+.... ....+.+..+++.
T Consensus 261 vy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~-si~lc~~V~GQ~~ 339 (475)
T KOG0258|consen 261 VYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLA-SIKLCPQVSGQKL 339 (475)
T ss_pred ccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHH-hhhhcCCccchhh
Confidence 32333 2322211 11 2232 22 45799876 899999842 344444332110 0001111111111
Q ss_pred HHH----------HHHH--hcCchHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEe---c------------
Q 012368 355 AIA----------VLDK--ISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEF---D------------ 407 (465)
Q Consensus 355 a~a----------~L~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~---~------------ 407 (465)
.-. ..+. -+.+...+.++++...+.+.+++ .+.+..-+..|.|+.+.- +
T Consensus 340 vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns----~~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~ 415 (475)
T KOG0258|consen 340 VDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNS----LEGISCNPVQGAMYLFPQISLPPKAIEAAKALGI 415 (475)
T ss_pred hceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhh----cCceeeccCccceeecccccCCHHHHHHHHHhCC
Confidence 110 0111 12345566666666666555544 356667778898887643 2
Q ss_pred CChHHHHHHHHH-CCceEeecCC----CC--EEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 408 VSATPVVDACRD-SGLLVLTAGK----GN--VVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 408 ~~~~~~~~~l~~-~Gv~v~~~~~----~~--~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
.+..-.+..|++ -||-+.|+.. ++ .+|.++- ... + +.+++++++-.++
T Consensus 416 ~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiL---p~~-~-~~i~~~~~fH~~f 470 (475)
T KOG0258|consen 416 APDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTIL---PPG-L-EIIEKFKKFHAEF 470 (475)
T ss_pred CCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeec---Cch-h-HHHHHHHHHHHHH
Confidence 111224556665 6999988731 22 3665432 122 3 5566665554443
No 351
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.31 E-value=2.7e-10 Score=107.90 Aligned_cols=275 Identities=15% Similarity=0.136 Sum_probs=152.7
Q ss_pred EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHH
Q 012368 158 VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEA 237 (465)
Q Consensus 158 v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 237 (465)
-+-|.|||-|+..+.+....+. ++..|.+.+|+|..+.......+-.....+.| ......+ |.+.
T Consensus 97 t~Qt~GGTGAL~~~A~fl~~~~---------~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yy---d~~~~~~---df~~ 161 (396)
T COG1448 97 TVQTLGGTGALRVAADFLARFF---------PDATVWISDPTWPNHKAIFEAAGLEVETYPYY---DAETKGL---DFDG 161 (396)
T ss_pred heecCCcchHHHHHHHHHHHhC---------CCceEEeCCCCcHhHHHHHHhcCCceeeeecc---ccccccc---cHHH
Confidence 3568899999999888776654 46779999999976654444333222111111 1111112 4455
Q ss_pred HHhhcC--CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc--ccccccc-CCcc-cEE
Q 012368 238 TRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY--LWAHEHY-GIFP-DIM 311 (465)
Q Consensus 238 le~~l~--~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~--~~~~~~~-~~~p-di~ 311 (465)
+-..|+ +.. .+|++-+--+|++.+-++.+.+++|.++.++.+.+-++|=+|-||+.... .++...+ ...+ -++
T Consensus 162 mla~L~~a~~~-~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lv 240 (396)
T COG1448 162 MLADLKTAPEG-SVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLV 240 (396)
T ss_pred HHHHHHhCCCC-CEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEE
Confidence 444443 222 24444443333323567999999999999999999999999999963211 1111111 1122 233
Q ss_pred --EecccCCC-ccceeeEEe---CHHHHhhccC---CCCcCCCCChHHHHHH-HHHHHHH--h------cCchHHHHHHH
Q 012368 312 --TLAKPLAG-GLPIGAALV---TEKVASAINY---GDHGSTFAGSPLVCNA-AIAVLDK--I------SNPAFLASVSK 373 (465)
Q Consensus 312 --t~sK~lg~-G~~iG~v~~---~~~i~~~~~~---~~~~~t~~~~~~~~~a-a~a~L~~--~------~~~~~~~~~~~ 373 (465)
+|||.||- |-|+|++.. +++..+.+.. ....++|+.+|---++ ....|+. + +-+++.+++.+
T Consensus 241 a~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~ 320 (396)
T COG1448 241 ASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILE 320 (396)
T ss_pred EehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 58899996 889998753 3444444321 1233556544432222 2222321 0 01234455555
Q ss_pred HHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHH
Q 012368 374 KGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEIL 453 (465)
Q Consensus 374 ~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l 453 (465)
++..|.+.|++.......-.-....|+|...- ...+++.+..-+.||++...| ||+++ ..++..++.+++.|
T Consensus 321 mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~G--ls~~QV~rLree~~IY~v~sG-----Ri~va-Gl~~~ni~~va~ai 392 (396)
T COG1448 321 MRQALVDALKALGAPRNFDFIISQRGMFSYTG--LSPEQVDRLREEFGIYLVASG-----RINVA-GLNTSNIDYVAKAI 392 (396)
T ss_pred HHHHHHHHHHhhCCCcccchHhhcCceeecCC--CCHHHHHHHHHhccEEEecCC-----eeeec-cCChhhHHHHHHHH
Confidence 55555555554322211111223445543332 234444444446799998665 77765 55888899999988
Q ss_pred HHH
Q 012368 454 CKT 456 (465)
Q Consensus 454 ~~~ 456 (465)
.++
T Consensus 393 ~~v 395 (396)
T COG1448 393 AAV 395 (396)
T ss_pred Hhh
Confidence 765
No 352
>PLN02271 serine hydroxymethyltransferase
Probab=99.29 E-value=1.7e-09 Score=109.24 Aligned_cols=269 Identities=15% Similarity=0.136 Sum_probs=153.9
Q ss_pred EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccc-cCCCCcCCCCCCCCCCceEeeC----
Q 012368 158 VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALAL-TSKEHYRSPFEPVMPGVNFVEY---- 232 (465)
Q Consensus 158 v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---- 232 (465)
|... ||+.||..++.... .|+|+|+..+..+-|+....... .+...- .....+..+||
T Consensus 218 VQp~-SGs~AN~aV~~ALl-----------~PGD~IL~ldl~~GGHlshg~~~~~g~~vs-----~sG~~~~~vpY~~d~ 280 (586)
T PLN02271 218 VQPY-SCTSANFAVYTGLL-----------LPGDRIMGLDSPSGGHMSHGYYTPGGKKVS-----GASIFFESLPYKVNP 280 (586)
T ss_pred eeec-cHHHHHHHHHHHhc-----------CCCCEEEEecCCCCCchhcccccccccccc-----cccceEEEEEccccc
Confidence 4443 89999999987665 27999999998776665433211 000000 00001122221
Q ss_pred ----CCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcc
Q 012368 233 ----GNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFP 308 (465)
Q Consensus 233 ----~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~p 308 (465)
-|.+++++.....++++|++...... ...+ +++++++|+++|++|++|-+|. .|-.........+. ..
T Consensus 281 ~~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~D----~~~i~eIAdevGA~LmvD~AH~-aGLIa~g~~~sP~~-~a 352 (586)
T PLN02271 281 QTGYIDYDKLEEKALDFRPKILICGGSSYP--REWD----YARFRQIADKCGAVLMCDMAHI-SGLVAAKECVNPFD-YC 352 (586)
T ss_pred ccCccCHHHHHHHhhhcCCeEEEECchhcc--CcCC----HHHHHHHHHHcCCEEEEECccc-ccccccCcCCCCCc-CC
Confidence 17899998655557888888664322 1223 8899999999999999999987 33222111001111 36
Q ss_pred cEEEec--ccCCCccceeeEEeCHH--------------------HHhhccC----CCCcCCCCChHHHHHHHHHHHHHh
Q 012368 309 DIMTLA--KPLAGGLPIGAALVTEK--------------------VASAINY----GDHGSTFAGSPLVCNAAIAVLDKI 362 (465)
Q Consensus 309 di~t~s--K~lg~G~~iG~v~~~~~--------------------i~~~~~~----~~~~~t~~~~~~~~~aa~a~L~~~ 362 (465)
|++|.+ |+|.|. +.|.++.+++ +.+.+.. +.++++.+. .+++...+++..
T Consensus 353 Dvvt~TTHKtLrGP-rGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~---~IAalAvalkea 428 (586)
T PLN02271 353 DIVTSTTHKSLRGP-RGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNN---HIAALAIALKQV 428 (586)
T ss_pred cEEEeCCcccCCCC-CceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHH---HHHHHHHHHHHH
Confidence 888765 999763 2377776653 3333322 222222221 233434445544
Q ss_pred cCc---hHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEec---CChHHHHHHHHHCCceEee----cC----
Q 012368 363 SNP---AFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFD---VSATPVVDACRDSGLLVLT----AG---- 428 (465)
Q Consensus 363 ~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~---~~~~~~~~~l~~~Gv~v~~----~~---- 428 (465)
..+ ++.+++.++.+.|.+.|.+. .+.++..- ....++++++. .......+.|.+.||.+.. +.
T Consensus 429 ~~~efk~Ya~QVv~NAkaLA~~L~~~--G~~vv~gg-TdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~ 505 (586)
T PLN02271 429 ATPEYKAYMQQVKKNAQALASALLRR--KCRLVTGG-TDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTI 505 (586)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHC--CCeEeeCC-CCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCC
Confidence 443 46667777777777777653 33332211 12345566662 2455566666677888742 21
Q ss_pred CCCEEEEecC----CCCcHHHHHHHHHHHHHHHH
Q 012368 429 KGNVVRLVPP----LIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 429 ~~~~lRi~~~----~~~t~e~i~~~l~~l~~~l~ 458 (465)
....+||-.+ ....++|++++.+.|.+++.
T Consensus 506 ~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 506 SPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 1244888554 33567889998888888876
No 353
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.29 E-value=2.3e-09 Score=105.19 Aligned_cols=335 Identities=14% Similarity=0.113 Sum_probs=187.6
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARK 177 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~ 177 (465)
..|||+.+..++ +-..++..+|+.. +.- .+..++...+|.+.+++.+|.+.++++.+|..|..++++....
T Consensus 41 dV~IDLrSDTgT---~apS~~m~aAM~~----GDD--~Y~gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~~~ 111 (467)
T TIGR02617 41 DVFIDLLTDSGT---GAVTQSMQAAMMR----GDE--AYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIK 111 (467)
T ss_pred CeEEECccCCCC---CCCCHHHHHHHHc----CCc--ccccCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhhcc
Confidence 357999997664 2245777777764 111 2234555789999999999999999999999999998886652
Q ss_pred HhhhcCCCCCCCCceEEE------EcCCcccCcc-ccccccCCCCcCCC-CCCCCCCceEeeC---CCHHHHHhhcCC--
Q 012368 178 FQRHSNPDSKEPATEFVS------FTNSFHGRTM-GALALTSKEHYRSP-FEPVMPGVNFVEY---GNIEATRKLIQP-- 244 (465)
Q Consensus 178 ~t~~~~~~~~~~~~~ii~------~~~~yhg~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~d~~~le~~l~~-- 244 (465)
++++.+++ ....||-.+. +...+++....... ........ ..++ -|+++|+++|++
T Consensus 112 ----------~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~-~~~fkG~~dl~~le~~I~~~g 180 (467)
T TIGR02617 112 ----------KREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGV-RYDFKGNFDLEGLERGIEEVG 180 (467)
T ss_pred ----------cccccccccccccccceEEEEecchHHHHHcCceeecccchhhccccc-CCCCCCCcCHHHHHHHHhhcC
Confidence 02333331 1122222221 12222221110000 00000000 0111 289999999983
Q ss_pred -CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc----CC------CCCCccc---cccccCCcccE
Q 012368 245 -GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC----GL------GRTGYLW---AHEHYGIFPDI 310 (465)
Q Consensus 245 -~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~----g~------gr~g~~~---~~~~~~~~pdi 310 (465)
+++..+.+.-.++..|..+.+.+.+++++++|++||+.++.|-+-- -| +..+... +.+.+. ..|.
T Consensus 181 ~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~-~aDs 259 (467)
T TIGR02617 181 PNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYK-YADM 259 (467)
T ss_pred CCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhc-cCCE
Confidence 3455555555555556667899999999999999999999997521 01 1222210 001111 2466
Q ss_pred E--EecccCCCccceeeE-EeCHH----HHhhccC----CCCcCCCCC-hHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 012368 311 M--TLAKPLAGGLPIGAA-LVTEK----VASAINY----GDHGSTFAG-SPLVCNAAIAVLDKISNPAFLASVSKKGHYF 378 (465)
Q Consensus 311 ~--t~sK~lg~G~~iG~v-~~~~~----i~~~~~~----~~~~~t~~~-~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l 378 (465)
+ |+||.++. |+|.+ +++++ +.+..+. .....||++ +.-.+.|....|+..-+++++.+-.+..++|
T Consensus 260 vt~slsKglgA--pvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl 337 (467)
T TIGR02617 260 LAMSAKKDAMV--PMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQVQYL 337 (467)
T ss_pred EEEEcCCCCCC--cccceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHHHHHH
Confidence 5 45677654 66544 45543 3333322 123456654 2334444444566554566666666666777
Q ss_pred HHHHHHHHHcCCCceeeeccceEEEEEe----c------CChHHHHHHHH-HCCceEeec-----------CC-----CC
Q 012368 379 KETLKQKLARNPHVKDVRGLGLIIGIEF----D------VSATPVVDACR-DSGLLVLTA-----------GK-----GN 431 (465)
Q Consensus 379 ~~~l~~~~~~~~~~~~~~~~g~~~~i~~----~------~~~~~~~~~l~-~~Gv~v~~~-----------~~-----~~ 431 (465)
.+.|.+. ..|++. +. |.-+.++. + -++..++-+|. +-||-..-. +. -.
T Consensus 338 ~~~L~~~--Gvpi~~-~G--ghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~e 412 (467)
T TIGR02617 338 VNGLEEI--GVVCQQ-AG--GHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAE 412 (467)
T ss_pred HHHHHhC--CCcEEe-cC--ccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccc
Confidence 7777664 444433 32 33333332 1 24566777765 445542211 00 14
Q ss_pred EEEEecC-CCCcHHHHHHHHHHHHHHHHHh
Q 012368 432 VVRLVPP-LIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 432 ~lRi~~~-~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
.+|+.+| -+-|.+++|..++++..+.++-
T Consensus 413 l~RlaipRrvyt~~h~d~v~~~~~~~~~~~ 442 (467)
T TIGR02617 413 LLRLTIPRATYTQTHMDFIIEAFKHVKENA 442 (467)
T ss_pred eeeeccccccccHhHHHHHHHHHHHHHhhh
Confidence 5898876 3458999999999998877653
No 354
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.27 E-value=1.5e-11 Score=117.00 Aligned_cols=197 Identities=17% Similarity=0.146 Sum_probs=120.5
Q ss_pred CCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEE
Q 012368 115 GDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFV 194 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii 194 (465)
.+|++.+++.+.... .. .+..++...++++++++.+|.+.++|++||+.||.++++.... +.+.||
T Consensus 7 ~~~~m~~a~~~a~~g--d~-~Yg~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~-----------~~~~vi 72 (290)
T PF01212_consen 7 PTPAMLEAMAAANVG--DD-AYGEDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLR-----------PGESVI 72 (290)
T ss_dssp S-HHEEHHHHHTTSB---C-CTTSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHH-----------TTEEEE
T ss_pred CCHHHHHHHHccccC--Cc-ccCCChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHh-----------cCCcee
Confidence 579999999554322 11 3455677899999999999999999999999999999997773 566777
Q ss_pred EEcCCccc--Cccccc-cccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCC-----CCeEEEEEcccCCCCCcccCCH
Q 012368 195 SFTNSFHG--RTMGAL-ALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQP-----GKTAAVFVEPIQGEGGIYSATK 266 (465)
Q Consensus 195 ~~~~~yhg--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-----~~~a~vi~ep~~~~~G~~~~~~ 266 (465)
..++ .|- +..++. .+++..... .+...... -|+++|++.+.. .++++|.+|......|..+++.
T Consensus 73 ~~~~-aHi~~~E~ga~~~~~G~~~~~---l~~~~~G~----l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~ 144 (290)
T PF01212_consen 73 CADT-AHIHFDETGAIEELSGAKLIP---LPSDDDGK----LTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSL 144 (290)
T ss_dssp EETT-EHHHHSSTTHHHHHTTCEEEE---EBECTGTB----B-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---H
T ss_pred cccc-ceeeeeccchhhHhcCcEEEE---CCCcccCC----CCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCH
Confidence 7665 333 222222 122211100 00001011 178999999873 3578888887766655567899
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccC--CCCCCccccccccCCcccEEEecccCCCccceeeE-EeCHHHHhh
Q 012368 267 EFLQFLRDACDDAGALLVFDEVQCG--LGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAA-LVTEKVASA 335 (465)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~DEv~~g--~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v-~~~~~i~~~ 335 (465)
++|++|.++|++||+.|+.|-+--. ....|. ......-..|++++|=+-++|.+.|.+ ++++++++.
T Consensus 145 ~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~--~~~e~~~~~D~v~~~~tK~~g~~~Gavl~~~~~~i~~ 214 (290)
T PF01212_consen 145 EELRAISELAREHGLPLHMDGARLANAAAALGV--SLAEIAAGADSVSFGGTKNGGAPGGAVLAGNKEFIAK 214 (290)
T ss_dssp HHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHH--HHHHHHTTSSEEEEETTSTT-SSSEEEEEESHHHHHH
T ss_pred HHHHHHHHHHHhCceEEEEehhhHHHhhhcccc--cHHHHhhhCCEEEEEEEcccccccceEEEechHHHHH
Confidence 9999999999999999999975210 000111 111112346888776444445566555 568885543
No 355
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.24 E-value=5.7e-09 Score=113.45 Aligned_cols=305 Identities=11% Similarity=0.061 Sum_probs=173.6
Q ss_pred cCCC-CCHHHHHHHHHHHhhcccccCCCCCHH-------HHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHHHHhh
Q 012368 111 ALGH-GDADWIKAVVDQANVLTHVSNMYYSIP-------QIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQR 180 (465)
Q Consensus 111 ~lGh-~~p~v~~a~~~~~~~~~~~~~~~~~~~-------~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~~~t~ 180 (465)
.++| -|+.|.+++.+..+.++.+ ++|..+. ..++...++++.| .+.+-++.++|.+.+.++...+ .+.
T Consensus 112 ~y~~~~P~~v~~~i~~~~~~~Tay-tPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~-~~~ 189 (993)
T PLN02414 112 YYNTHVPPVILRNILENPGWYTQY-TPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNN-ILK 189 (993)
T ss_pred CCCccCCHHHHHHHHhChHHHhhc-CCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHh-ccc
Confidence 4555 5566668888766543332 3343221 3456666778887 5689999999999987665443 221
Q ss_pred hcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCC
Q 012368 181 HSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGG 260 (465)
Q Consensus 181 ~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G 260 (465)
.++++|++.+..|+.......... ....-.+..+|..+.+ .. .+.+++++ ..+++..|
T Consensus 190 -------g~~~~VlVs~~~hP~~~~v~~t~a---------~~~GieV~~v~~~~~~----~~-~~~v~~vl-vq~P~~~G 247 (993)
T PLN02414 190 -------GKKKKFLIASNCHPQTIDVCQTRA---------DGLGLEVVVADEKDFD----YS-SGDVCGVL-VQYPATDG 247 (993)
T ss_pred -------CCCCEEEEcCccCHhHHHHHHHhh---------hhcCCEEEEecchhhc----cc-cCceEEEE-EecCCCCe
Confidence 035678888777755443221111 1111233444432211 11 22455554 44555677
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccC---C-CccceeeEEeCHHHHh
Q 012368 261 IYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPL---A-GGLPIGAALVTEKVAS 334 (465)
Q Consensus 261 ~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~l---g-~G~~iG~v~~~~~i~~ 334 (465)
.+.+ +++|.++|+++|+++++ -++. ++-.+. -... .+..|+++.+ |.. | ||-..|++.+++++..
T Consensus 248 ~v~d----v~~I~~~ah~~GaL~iV-aad~-lal~~l-~~pg--e~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r 318 (993)
T PLN02414 248 EVLD----YAEFVKNAHANGVKVVM-ATDL-LALTML-KPPG--EWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKR 318 (993)
T ss_pred EEcC----HHHHHHHHHHcCCEEEE-EECH-HHhcCC-CCHh--hccCcEEEECCCccccCCCCCCCCeeEEEECHHHHh
Confidence 7766 99999999999999999 3322 211110 0111 2346887653 443 2 4555899999998766
Q ss_pred hccCCC-------Cc-C----------------CCCChHH---HHHHHHHHH--HHhcC---chHHHHHHHHHHHHHHHH
Q 012368 335 AINYGD-------HG-S----------------TFAGSPL---VCNAAIAVL--DKISN---PAFLASVSKKGHYFKETL 382 (465)
Q Consensus 335 ~~~~~~-------~~-~----------------t~~~~~~---~~~aa~a~L--~~~~~---~~~~~~~~~~~~~l~~~l 382 (465)
.+-... .+ . ....|.- +..|++++. ..+.. ++..+++.++..+++++|
T Consensus 319 ~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L 398 (993)
T PLN02414 319 LMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGL 398 (993)
T ss_pred hCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 442110 00 0 0012322 222333222 22222 344566677777777777
Q ss_pred HHHHHcCCCceeeeccceEEEEEecCChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHH
Q 012368 383 KQKLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILC 454 (465)
Q Consensus 383 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~ 454 (465)
.+. .+..... .....+.+.++ ...++.++|.++||.+..... +.+|+++....|++||+.+++.|.
T Consensus 399 ~~~--G~~~~~~--~~f~~vt~~~~-~~~~v~~~L~~~gI~l~~~~~-~~lrvs~~e~~T~edId~L~~~l~ 464 (993)
T PLN02414 399 KKL--GFQVQSL--PFFDTVKVKCS-DADAIADAAAKVGINLRVVDA-NTVTVSFDETTTLEDVDKLFKVFA 464 (993)
T ss_pred hhc--CCccCCC--CCcCeEEEecC-CHHHHHHHHHHCCCeeEEecC-CeEEEEeeccCCHHHHHHHHHHHc
Confidence 542 2222111 11113334443 457899999999998876543 679999999999999999999996
No 356
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.22 E-value=1.1e-08 Score=98.18 Aligned_cols=291 Identities=19% Similarity=0.206 Sum_probs=182.8
Q ss_pred HHHHHHHHHhhcCCCeEEec-CCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCC
Q 012368 142 QIELAKRLVACSFADRVFFS-NTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPF 220 (465)
Q Consensus 142 ~~~la~~l~~~~~~~~v~~~-~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 220 (465)
..+|.++|++..|.|.|-+. ++|++.=..-+.++++|...+++. .|+.+|+. .+-||.......+.|-..
T Consensus 111 i~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~---~R~~~LIP-~SAHGTNPASAam~G~~V----- 181 (496)
T COG1003 111 IYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEG---HRNICLIP-DSAHGTNPASAAMAGFKV----- 181 (496)
T ss_pred HHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCC---cCcEEEee-ccccCCChhhHhhcCceE-----
Confidence 55788999999998877655 779998888899999998776654 25555555 467888766655544222
Q ss_pred CCCCCCceEeeCC-----CHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecc----ccC
Q 012368 221 EPVMPGVNFVEYG-----NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEV----QCG 291 (465)
Q Consensus 221 ~~~~~~~~~~~~~-----d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv----~~g 291 (465)
+.++.+ |+++|++++.+ +++++++. ++++-|+. ++-+.+|+++.+++|..|..|-+ +-|
T Consensus 182 -------V~V~~~~~G~VDlddLk~k~~~-~~AalMiT-nPsT~GvF---E~~I~ei~~ivH~~Gg~vY~DGANlNA~vG 249 (496)
T COG1003 182 -------VVVKCDENGNVDLDDLRAKAED-NLAALMIT-NPSTLGVF---EEDIREICEIVHEAGGQVYYDGANLNAIVG 249 (496)
T ss_pred -------EEEecCCCCCccHHHHHHHhcc-ceeEEEec-cCcccccc---hhhHHHHHHHHHHcCCEEEecCcchhhhhc
Confidence 222222 89999999974 56555443 23444554 34589999999999999999986 334
Q ss_pred CCCCCccccccccCCcccEE------EecccCCC-ccceeeEEeCHHHHhhccC----CC---------------CcCCC
Q 012368 292 LGRTGYLWAHEHYGIFPDIM------TLAKPLAG-GLPIGAALVTEKVASAINY----GD---------------HGSTF 345 (465)
Q Consensus 292 ~gr~g~~~~~~~~~~~pdi~------t~sK~lg~-G~~iG~v~~~~~i~~~~~~----~~---------------~~~t~ 345 (465)
..|.|.+ ..|++ ||+-.-|| |-..|-|.+++++...+-. .. ....+
T Consensus 250 ~~rPGd~--------G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~ 321 (496)
T COG1003 250 LARPGDM--------GFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAP 321 (496)
T ss_pred ccccccc--------ccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccc
Confidence 4444432 23444 44444454 4667777777777665532 00 01223
Q ss_pred CChHHHHHHHHHHHHHhcCchHH---HHHHHHHHHHHHHHHHHHHcCCCceeeec-cceEEEEEe-------cCChHHHH
Q 012368 346 AGSPLVCNAAIAVLDKISNPAFL---ASVSKKGHYFKETLKQKLARNPHVKDVRG-LGLIIGIEF-------DVSATPVV 414 (465)
Q Consensus 346 ~~~~~~~~aa~a~L~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~g~~~~i~~-------~~~~~~~~ 414 (465)
.+|......+.+.+..+..+.+. +...-+..++.++|+. .+++...... .--=+.++. .....+++
T Consensus 322 ~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~---~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvA 398 (496)
T COG1003 322 YGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG---YYPVPYTGENRVAHECILDARPLKKETGVRALDVA 398 (496)
T ss_pred cCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh---cCccccCCCCcceeEEEeechHhHhhcCCcHHHHH
Confidence 34555555666666666544432 2233355666666654 3332211110 000011221 14567899
Q ss_pred HHHHHCCceEeecCC----CCEEEEecCCCCcHHHHHHHHHHHHHHHHHhhhcC
Q 012368 415 DACRDSGLLVLTAGK----GNVVRLVPPLIISEQELDQAVEILCKTLPVLDSNS 464 (465)
Q Consensus 415 ~~l~~~Gv~v~~~~~----~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~~ 464 (465)
++|++.|+....... .+.+.|-|.-.-+++++|++++++.++.++.++.+
T Consensus 399 KrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~~~ 452 (496)
T COG1003 399 KRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADAVP 452 (496)
T ss_pred HHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999987643321 25688888777899999999999999988876653
No 357
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.20 E-value=5.1e-09 Score=105.73 Aligned_cols=295 Identities=16% Similarity=0.081 Sum_probs=163.5
Q ss_pred CCHHHHHHHHHHHhhcccccCCCC--CHHHHHHHHHHHhhcCC-C--eEEecCCHHHHHHHHHHHHHHHhhhcCCC--CC
Q 012368 115 GDADWIKAVVDQANVLTHVSNMYY--SIPQIELAKRLVACSFA-D--RVFFSNTGTEANEAAIKFARKFQRHSNPD--SK 187 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~~~~~~--~~~~~~la~~l~~~~~~-~--~v~~~~sG~eA~~~al~~a~~~t~~~~~~--~~ 187 (465)
.++...+++...+.+.......++ ....+++..++++.++. + .-.||+||||||.+|+.+++......... ..
T Consensus 74 ~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~ 153 (460)
T COG0076 74 VPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGK 153 (460)
T ss_pred CHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 456667777777665322222232 23366777778887762 3 46899999999999999998766311100 00
Q ss_pred CCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCC-CceEeeCCCHHHHHhhcCCCCeEE-EEEcccCCCCCcccCC
Q 012368 188 EPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMP-GVNFVEYGNIEATRKLIQPGKTAA-VFVEPIQGEGGIYSAT 265 (465)
Q Consensus 188 ~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~le~~l~~~~~a~-vi~ep~~~~~G~~~~~ 265 (465)
..+...|+.....|-+..-+..+-+-.... .+..+ ... -|+++|+++++..++.. |+..--....|.+-+
T Consensus 154 ~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~---v~~~~~~~~----id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDd- 225 (460)
T COG0076 154 PGGKPNIVCSETAHFSFEKAARYLGLGLRR---VPTVPTDYR----IDVDALEEAIDENTIGGVVVGTAGTTDTGSIDD- 225 (460)
T ss_pred cCCCCeEEecCcchhHHHHHHHHhCCCcee---EEeccCccc----cCHHHHHHHHHhhccCceEEEEecCCCCCccCC-
Confidence 011225666667776665554433322111 11112 111 28999999998654442 444333444455544
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCCCC-Ccccccc-ccCC-cccEEEec--ccCCCccceeeEEeCHH--HHhhcc-
Q 012368 266 KEFLQFLRDACDDAGALLVFDEVQCGLGRT-GYLWAHE-HYGI-FPDIMTLA--KPLAGGLPIGAALVTEK--VASAIN- 337 (465)
Q Consensus 266 ~~~l~~l~~l~~~~g~llI~DEv~~g~gr~-g~~~~~~-~~~~-~pdi~t~s--K~lg~G~~iG~v~~~~~--i~~~~~- 337 (465)
+++|.++|+++++++++|-++.||-.. -.. ... .+++ ..|.++++ |.....+++|+++.+++ +.+.+.
T Consensus 226 ---i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~-~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~ 301 (460)
T COG0076 226 ---IEELADIAEEYGIWLHVDAAFGGFLLPFLEP-DGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIF 301 (460)
T ss_pred ---HHHHHHHHHHcCCcEEEEccccceeecccCc-cchhhcCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhc
Confidence 999999999999999999999886321 100 011 1233 35677766 77666789999998754 433332
Q ss_pred -CCCCc------CCCCCh--HHHHHHHHHHHHHhcCchHHH---HHHHHHHHHHHHHHHHHHcCCCcee-eeccceEEEE
Q 012368 338 -YGDHG------STFAGS--PLVCNAAIAVLDKISNPAFLA---SVSKKGHYFKETLKQKLARNPHVKD-VRGLGLIIGI 404 (465)
Q Consensus 338 -~~~~~------~t~~~~--~~~~~aa~a~L~~~~~~~~~~---~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~g~~~~i 404 (465)
..... .|..++ .-..++..+.+..+..+++.+ +..++.+++.+.|++. +.+.. ..+..+.+.+
T Consensus 302 ~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~----~~~e~~~~p~l~~V~f 377 (460)
T COG0076 302 ADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKL----GDFELVNEPELPIVAF 377 (460)
T ss_pred ccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhC----CCcEeecCCccceEEE
Confidence 11111 111122 224455667777776555433 3335555665555543 42222 2244555666
Q ss_pred EecCC---hHHHHHHHHHCCceEe
Q 012368 405 EFDVS---ATPVVDACRDSGLLVL 425 (465)
Q Consensus 405 ~~~~~---~~~~~~~l~~~Gv~v~ 425 (465)
.++.. ..+...++.+.|..+.
T Consensus 378 r~~~~~~~~~~~~~~~~~~gw~v~ 401 (460)
T COG0076 378 RLKDDEDTLADLSERLDRRGWQVP 401 (460)
T ss_pred EcCCcccchhchHHHHHhcCceee
Confidence 65221 3344555555666554
No 358
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.19 E-value=5.9e-09 Score=102.82 Aligned_cols=273 Identities=14% Similarity=0.093 Sum_probs=157.1
Q ss_pred HHHHHHHHHhhcC-C-C--eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccc---cccccCCC
Q 012368 142 QIELAKRLVACSF-A-D--RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMG---ALALTSKE 214 (465)
Q Consensus 142 ~~~la~~l~~~~~-~-~--~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~---~~~~~~~~ 214 (465)
..+..+.|.+.++ . + -++++.||+.++++++..+.. ++++++++. + +.|.-.. +...+...
T Consensus 41 ~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~----------~~g~~vLv~-g-~FG~r~~~eia~~~g~~~ 108 (374)
T TIGR01365 41 LAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLG----------CRGVDVLAW-E-SFGKGWVTDVTKQLKLPD 108 (374)
T ss_pred HHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCC----------CCCCeEEEE-C-HHHHHHHHHHHHhcCCCC
Confidence 5566777777776 2 2 367799999999999986541 136677764 3 3344322 11111100
Q ss_pred CcCCCCCCCCCCceEeeCC---CHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHH-hCCEEEEecccc
Q 012368 215 HYRSPFEPVMPGVNFVEYG---NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDD-AGALLVFDEVQC 290 (465)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~---d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~-~g~llI~DEv~~ 290 (465)
. .+...+++ |+++++. + .. |.+..+-.++|+..+ ++++. ++ +++++|+|-|-+
T Consensus 109 v----------~~l~~~~g~~~~~~~ve~--~-~~---v~~vhnETSTGv~np----v~~i~---~~~~~~lliVDavSs 165 (374)
T TIGR01365 109 V----------RVLEAEYGKLPDLKKVDF--K-ND---VVFTWNGTTSGVRVP----NGDFI---PADREGLTICDATSA 165 (374)
T ss_pred c----------EEEcCCCCCCCCHHHcCC--C-CC---EEEecCCCchheecc----ccccc---cccCCCcEEEEccch
Confidence 0 01112222 6777762 1 12 334444455676665 44433 33 589999998865
Q ss_pred CCCCCCccccccccCCcccEEEec--ccCCCccceeeEEeCHHHHhhccCC----------------------CCcCCCC
Q 012368 291 GLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAINYG----------------------DHGSTFA 346 (465)
Q Consensus 291 g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~~~----------------------~~~~t~~ 346 (465)
+| +..+..+ + .|++..| |+|++.-.+++++.+++.++..... ....|.+
T Consensus 166 -~g--~~~l~~d--~--iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~ 238 (374)
T TIGR01365 166 -AF--AQDLDYH--K--LDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTIN 238 (374)
T ss_pred -hc--CCCCChh--H--CcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCC
Confidence 53 3333333 2 6777655 9998744567888888877654310 0122333
Q ss_pred -ChHHHHHHHHHHHHHhcCc----hHHHHHHHHHHHHHHHHHHHHHcCCCce---eeeccceEEEEEe-cC-------C-
Q 012368 347 -GSPLVCNAAIAVLDKISNP----AFLASVSKKGHYFKETLKQKLARNPHVK---DVRGLGLIIGIEF-DV-------S- 409 (465)
Q Consensus 347 -~~~~~~~aa~a~L~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~~---~~~~~g~~~~i~~-~~-------~- 409 (465)
.+.....++..+|+.+.++ +..++.+++.+.+++.++++- .+.... ..++ .....+.+ +. +
T Consensus 239 TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg-~l~~~~~~~~~rS-~tvt~v~~~~~~~~~~~~~~ 316 (374)
T TIGR01365 239 TPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNN-WIHFLAETPEIRS-NTSVCLKVVDPAIDALDEDA 316 (374)
T ss_pred ChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCC-CcccCCCChhhcC-CCeEEEEeCCccccccccch
Confidence 3444556666777655443 344455555555555555531 011111 1222 22334444 21 2
Q ss_pred ----hHHHHHHHHHCCceEeecCC---CCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 410 ----ATPVVDACRDSGLLVLTAGK---GNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 410 ----~~~~~~~l~~~Gv~v~~~~~---~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
..++.+.|.++||.+.++.. +..+||...-.++.+|++.+++.|+-+.+
T Consensus 317 ~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 317 QADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred hhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence 57789999999999886642 57899988778999999999999986654
No 359
>PLN02452 phosphoserine transaminase
Probab=99.15 E-value=1e-08 Score=101.12 Aligned_cols=310 Identities=9% Similarity=0.010 Sum_probs=179.2
Q ss_pred CCHHHHHHHHHHHhhccc-------ccCCC--CCHHHHHHHHHHHhhcC-CC--e-EEecCCHHHHHHHHHHHHHHHhhh
Q 012368 115 GDADWIKAVVDQANVLTH-------VSNMY--YSIPQIELAKRLVACSF-AD--R-VFFSNTGTEANEAAIKFARKFQRH 181 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~-------~~~~~--~~~~~~~la~~l~~~~~-~~--~-v~~~~sG~eA~~~al~~a~~~t~~ 181 (465)
-+++|++++.+.+..+.. .+.+. ......+..+.|.+.++ ++ + +++..||+.++++++.-+..
T Consensus 18 lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl~~---- 93 (365)
T PLN02452 18 LPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNLCK---- 93 (365)
T ss_pred CCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhcCC----
Confidence 468899998887543211 01111 11235667777777776 32 3 45558899999988875542
Q ss_pred cCCCCCCCCceEEEEcCCcccCcccccc--ccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCC
Q 012368 182 SNPDSKEPATEFVSFTNSFHGRTMGALA--LTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEG 259 (465)
Q Consensus 182 ~~~~~~~~~~~ii~~~~~yhg~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~ 259 (465)
+++++++...++.|.-..-.. .+...... .. ....+....++++++ .+.+...|.+..+....
T Consensus 94 -------~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~---~~--~~~~~~~~~~~~~~~---~~~~~~~v~~~hnETst 158 (365)
T PLN02452 94 -------PGDKADFVVTGSWSKKAAKEAKKYCKTNVIA---SG--KDEKYTKIPSVSEWE---LTPDAKFVHICANETIH 158 (365)
T ss_pred -------CCCeEEEEECCHHHHHHHHHHHHhCCCcEEE---ec--CCCCCCCCCChHHcC---CCCCCcEEEECCCCCCC
Confidence 467777777766665432221 11100000 00 000000012444432 13356777777777777
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCCccceeeEEeCHHHHhhccCC
Q 012368 260 GIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYG 339 (465)
Q Consensus 260 G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~G~~iG~v~~~~~i~~~~~~~ 339 (465)
|+...+ ++++. ++++|+|-+++ +| +.....+.+++ |..+--|.+| .-.+|.+++++++++.+.+.
T Consensus 159 Gv~~~~---~~~i~------~~~lvVDa~Ss-~g--~~pidv~~~~v--~~~saqK~lG-P~Gl~~v~vr~~~l~~~~~~ 223 (365)
T PLN02452 159 GVEFKD---YPDVG------NVPLVADMSSN-FL--SKPVDVSKYGV--IYAGAQKNVG-PSGVTIVIIRKDLIGNARPI 223 (365)
T ss_pred cEecCc---ccccC------CCeEEEECCcc-cc--CcccCHHHcCE--EEEecccccC-CCCeEEEEEcHHHHhhcccC
Confidence 874222 33332 38999999987 42 33334455554 5556669996 23478999999998765432
Q ss_pred -----------CCcCCC-CChHHHHHHHHHHHHHhcCc----hHHHHHHHHHHHHHHHHHHHHHcCCCceeee-ccceEE
Q 012368 340 -----------DHGSTF-AGSPLVCNAAIAVLDKISNP----AFLASVSKKGHYFKETLKQKLARNPHVKDVR-GLGLII 402 (465)
Q Consensus 340 -----------~~~~t~-~~~~~~~~aa~a~L~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~g~~~ 402 (465)
....++ +.+...+.+..++|+.+.++ ...++.+++.+++++.|++...-+....... .....+
T Consensus 224 ~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~v 303 (365)
T PLN02452 224 TPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNV 303 (365)
T ss_pred CCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEE
Confidence 122333 34556677777888887553 3444555555555555554210001111101 123344
Q ss_pred EEEec--CChHHHHHHHHHCCceEeecCC--CCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 403 GIEFD--VSATPVVDACRDSGLLVLTAGK--GNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 403 ~i~~~--~~~~~~~~~l~~~Gv~v~~~~~--~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
.+.++ ....+|.+.+.++|+...++.. ++ +|++.=-.++.++++.+++.++++-++
T Consensus 304 sF~~~~~~~~~~f~~~~~~~g~~~~~G~r~~gg-~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 304 PFTLGGSELEAEFVKEAAKAGMVQLKGHRSVGG-MRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred EEEcCCchhHHHHHHHHHHCCCcccCCccccCc-eEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 45542 2467899999999999987753 44 999887788999999999998887653
No 360
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.15 E-value=2.4e-08 Score=109.12 Aligned_cols=274 Identities=15% Similarity=0.078 Sum_probs=158.5
Q ss_pred HHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCC
Q 012368 143 IELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPF 220 (465)
Q Consensus 143 ~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 220 (465)
.++...++++.| ..++-+..+++.+.+.++...+ +.+ .++++|++.+..|+..........
T Consensus 124 ~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~-~~~-------~~~~~vlv~~~~hP~~~~v~~t~a--------- 186 (954)
T PRK05367 124 LNFQTMVADLTGLEIANASLLDEATAAAEAMALAKR-VSK-------SKSNRFFVDDDVHPQTLDVLRTRA--------- 186 (954)
T ss_pred HHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhh-hcc-------CCCCEEEEcCccCHHHHHHHHHHH---------
Confidence 345566778888 4578899999999886665433 321 013788888877754432211110
Q ss_pred CCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccc
Q 012368 221 EPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA 300 (465)
Q Consensus 221 ~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~ 300 (465)
.+..-.+..++..+ + ++.++++++ +..+++..|.+.+ +++|.++|+++|+++++|-.+..++.. . .
T Consensus 187 ~~~G~ev~~~~~~~--d----~~~~~~~~v-lvq~p~~~G~i~d----~~~i~~~ah~~Gal~~vda~~~Al~~l-~--~ 252 (954)
T PRK05367 187 EPLGIEVVVGDAAK--A----LDHDDVFGV-LLQYPGTSGEVRD----YTALIAAAHARGALVAVAADLLALTLL-T--P 252 (954)
T ss_pred HhCCCEEEEecCcc--C----CCcccEEEE-EEecCCCCeeecc----HHHHHHHHHHcCCEEEEEehhhhccCC-C--C
Confidence 01112333444322 1 112345554 4455667777765 999999999999999999755322111 1 1
Q ss_pred ccccCCcccEEEec--cc---CC-CccceeeEEeCHHHHhhccCCCC-------c-------------------CCCCCh
Q 012368 301 HEHYGIFPDIMTLA--KP---LA-GGLPIGAALVTEKVASAINYGDH-------G-------------------STFAGS 348 (465)
Q Consensus 301 ~~~~~~~pdi~t~s--K~---lg-~G~~iG~v~~~~~i~~~~~~~~~-------~-------------------~t~~~~ 348 (465)
.. .+..|+++.+ |. +| ||-..|++.+++++...+.+... + .|.+..
T Consensus 253 pg--e~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNic 330 (954)
T PRK05367 253 PG--EMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNIC 330 (954)
T ss_pred hh--hcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccc
Confidence 11 2346777653 54 22 34458999999988776642210 0 011111
Q ss_pred -HHHHHHHHHH--HHHhcC---chHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEecCChHHHHHHHHHCCc
Q 012368 349 -PLVCNAAIAV--LDKISN---PAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGL 422 (465)
Q Consensus 349 -~~~~~aa~a~--L~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~l~~~Gv 422 (465)
..+..|..++ +..+.. ++..+++..+..+++++|.+. .+..... .....+.+.++.+..++.++|+++||
T Consensus 331 t~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~--G~~~~~~--~~f~~~~~~~~~~~~~i~~~l~~~gi 406 (954)
T PRK05367 331 TAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL--GLEVVHD--SFFDTLTVEVGGDAAAVLARALAAGI 406 (954)
T ss_pred hHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc--CcccCCC--CCCCeEEEeCCCCHHHHHHHHHHCCc
Confidence 1112222222 233333 234556666777777766542 2222111 11122334444467889999999999
Q ss_pred eEeecCCCCEEEEecCCCCcHHHHHHHHHHHH
Q 012368 423 LVLTAGKGNVVRLVPPLIISEQELDQAVEILC 454 (465)
Q Consensus 423 ~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~ 454 (465)
.+..... +.+|+++....|++||+.+++.|.
T Consensus 407 ~~~~~~~-~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 407 NLRRVDD-DHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred eeccccC-CEEEEEecccCCHHHHHHHHHHHc
Confidence 9865433 679999999999999999999996
No 361
>PRK15029 arginine decarboxylase; Provisional
Probab=99.11 E-value=9.5e-09 Score=108.78 Aligned_cols=294 Identities=16% Similarity=0.096 Sum_probs=165.4
Q ss_pred HHHHHHHHHhhcCCC-eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccC-CCCcCCC
Q 012368 142 QIELAKRLVACSFAD-RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS-KEHYRSP 219 (465)
Q Consensus 142 ~~~la~~l~~~~~~~-~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~-~~~~~~~ 219 (465)
..+..+..++.+|.+ ..+.+||.|.+|.+++..+.. ++++|++ +...|-+...++.+++ .+.|..+
T Consensus 207 I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~-----------~gd~Vlv-~RN~HKSv~~al~L~ga~Pvyl~P 274 (755)
T PRK15029 207 FGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMT-----------DNDVVVV-DRNCHKSIEQGLILTGAKPVYMVP 274 (755)
T ss_pred HHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcC-----------CCCEEEe-ecccHHHHHHHHHHcCCeEEEecc
Confidence 455556667778855 566778888888877776652 5666665 5556777777776654 3444432
Q ss_pred CCCCCCCce-Eee--CCCHHHHHhhcCC--CCe--------EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 012368 220 FEPVMPGVN-FVE--YGNIEATRKLIQP--GKT--------AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFD 286 (465)
Q Consensus 220 ~~~~~~~~~-~~~--~~d~~~le~~l~~--~~~--------a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D 286 (465)
... ..++. -++ .-+.+.++++|+. ... ++|++.|.. .|+... +++|.++|+++++.|++|
T Consensus 275 ~~~-~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY--~Gv~~d----i~~I~~~~h~~~~~llvD 347 (755)
T PRK15029 275 SRN-RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY--DGVCYN----AKEAQDLLEKTSDRLHFD 347 (755)
T ss_pred ccc-ccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC--cceeeC----HHHHHHHHHhcCCeEEEE
Confidence 210 11110 011 0137889888852 111 566666643 354443 899999999999999999
Q ss_pred ccccCCCCCCccccc-ccc-----C-Cccc-EEEec--ccCCCccceeeEEeC--------HHHHhhccCCCCcCCCCCh
Q 012368 287 EVQCGLGRTGYLWAH-EHY-----G-IFPD-IMTLA--KPLAGGLPIGAALVT--------EKVASAINYGDHGSTFAGS 348 (465)
Q Consensus 287 Ev~~g~gr~g~~~~~-~~~-----~-~~pd-i~t~s--K~lg~G~~iG~v~~~--------~~i~~~~~~~~~~~t~~~~ 348 (465)
|++.+.......+.. ... . ..+| +++-| |.+++=-..+++-.+ +.+.+.+. ...|.+.+
T Consensus 348 EAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~l~---~~qSTSPS 424 (755)
T PRK15029 348 EAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYM---MHATTSPL 424 (755)
T ss_pred CccccccccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHHHH---HHcCCCcH
Confidence 998652222222211 111 1 3477 66656 877641111222222 12222222 23344555
Q ss_pred HHHHHHHHHHHHHhcC---chHHHHHHHHHHHHHHHHHHHHHcC------------C-----------------------
Q 012368 349 PLVCNAAIAVLDKISN---PAFLASVSKKGHYFKETLKQKLARN------------P----------------------- 390 (465)
Q Consensus 349 ~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~------------~----------------------- 390 (465)
-+-++..-.+...++. ..++++..+....+++.+.++..++ |
T Consensus 425 Y~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 504 (755)
T PRK15029 425 YAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLT 504 (755)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccccchhhhc
Confidence 5555554444444432 3566777777888888886643210 0
Q ss_pred ---Cceeee------cc-----------ceEEEEEe---c---------CChHHHHHHHHHCCceEeecCCCCEEEEecC
Q 012368 391 ---HVKDVR------GL-----------GLIIGIEF---D---------VSATPVVDACRDSGLLVLTAGKGNVVRLVPP 438 (465)
Q Consensus 391 ---~~~~~~------~~-----------g~~~~i~~---~---------~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~ 438 (465)
...... +. .+=+.+.. + .++..+.+.|.++||.+--.+. ..+-+.++
T Consensus 505 ~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~~-~~vL~l~s 583 (755)
T PRK15029 505 TVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTD-FQIMFLFS 583 (755)
T ss_pred cccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEecCC-CeEEEEeC
Confidence 000010 00 01111211 1 1234788889889999987665 44555567
Q ss_pred CCCcHHHHHHHHHHHHHHHH
Q 012368 439 LIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 439 ~~~t~e~i~~~l~~l~~~l~ 458 (465)
...|++++++++++|.++.+
T Consensus 584 ~g~t~~~~~~L~~aL~~~~~ 603 (755)
T PRK15029 584 MGVTRGKWGTLVNTLCSFKR 603 (755)
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 78899999999999987744
No 362
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.08 E-value=1.6e-07 Score=89.73 Aligned_cols=317 Identities=17% Similarity=0.178 Sum_probs=179.8
Q ss_pred CCHHHHHHHHHHHhh-ccccc---CCC-CCHH---HHH-HHHHHHhhcCCCeE-EecCCHHHHHHHHHHHHHHHhhhcCC
Q 012368 115 GDADWIKAVVDQANV-LTHVS---NMY-YSIP---QIE-LAKRLVACSFADRV-FFSNTGTEANEAAIKFARKFQRHSNP 184 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~-~~~~~---~~~-~~~~---~~~-la~~l~~~~~~~~v-~~~~sG~eA~~~al~~a~~~t~~~~~ 184 (465)
.+|.|.+|.-..+.. +..++ .+| ..+. .+. ..++..++++.+.+ +=-.||+.||..++.++..
T Consensus 38 ~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~av~~All~------- 110 (413)
T COG0112 38 TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQAVYLALLQ------- 110 (413)
T ss_pred CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHHHHHHHHHHcC-------
Confidence 568899988776643 22111 111 2222 223 33444556775533 2346899999999887773
Q ss_pred CCCCCCceEEEEcCCcccCccccccc--cCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcc
Q 012368 185 DSKEPATEFVSFTNSFHGRTMGALAL--TSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIY 262 (465)
Q Consensus 185 ~~~~~~~~ii~~~~~yhg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~ 262 (465)
|+|+|+..+-..-|+....... ++.. +.....+..++...+ |.|++++.....++++||+-...
T Consensus 111 ----pGDtimgm~l~~GGHltHg~~v~~sG~~-~~~v~Y~vd~et~~I---DyD~~~k~a~e~kPK~ii~G~Sa------ 176 (413)
T COG0112 111 ----PGDTIMGLDLSHGGHLTHGSPVNFSGKL-FNVVSYGVDPETGLI---DYDEVEKLAKEVKPKLIIAGGSA------ 176 (413)
T ss_pred ----CCCeEecccCCCCCcccCCCCCCcccee-EEeEecccccccCcc---CHHHHHHHHHHhCCCEEEECccc------
Confidence 7999999887765665433221 1211 111111111111111 78899988876677777764321
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEecccc-CCCCCCccccccccCCcccEEEec--ccCCCccceeeEEeCH-HHHhhccC
Q 012368 263 SATKEFLQFLRDACDDAGALLVFDEVQC-GLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTE-KVASAINY 338 (465)
Q Consensus 263 ~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~-~i~~~~~~ 338 (465)
.+-.-.+++++++|++.|++|++|-+|- |+--.|.. ..-.. ..|++|-+ |+|.| -|.|.+++++ ++.+.+..
T Consensus 177 Y~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~--p~P~~-~AdvVTtTTHKTlrG-PrGG~Il~~~eel~kkin~ 252 (413)
T COG0112 177 YSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVH--PNPLP-HADVVTTTTHKTLRG-PRGGIILTNDEELAKKINS 252 (413)
T ss_pred cccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccC--CCCCC-ccceEeCCcccCCCC-CCceEEEeccHHHHHHhhh
Confidence 1111228999999999999999999864 33222211 11111 26788655 88865 3778888884 88888875
Q ss_pred CCCcCCCCChHHHHHHH-HHHHHHhcC---chHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEec---CChH
Q 012368 339 GDHGSTFAGSPLVCNAA-IAVLDKISN---PAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFD---VSAT 411 (465)
Q Consensus 339 ~~~~~t~~~~~~~~~aa-~a~L~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~---~~~~ 411 (465)
.-+.+..+++-+-..|| ..++....+ .++.+++.++.+.|.+.|.+. .+.++..- -..-++.+++. ....
T Consensus 253 aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~--G~~vvsGg-TdnHl~lVDl~~~~~~Gk 329 (413)
T COG0112 253 AVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER--GFKVVSGG-TDNHLVLVDLRSKGLTGK 329 (413)
T ss_pred hcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc--CCeEecCC-ccceEEEEEcccCCCCHH
Confidence 44444444433332232 233443333 346667777787777777663 23222211 11234556663 2345
Q ss_pred HHHHHHHHCCceEee----cCC-----CCEEEEecC----CCCcHHHHHHHHHHHHHHHHH
Q 012368 412 PVVDACRDSGLLVLT----AGK-----GNVVRLVPP----LIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 412 ~~~~~l~~~Gv~v~~----~~~-----~~~lRi~~~----~~~t~e~i~~~l~~l~~~l~~ 459 (465)
+....|-+.||.+.- ... ..-|||-.+ ..+.++|+++..+.|.+++..
T Consensus 330 ~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 330 KAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred HHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 555566677887742 211 234888654 335678999998888888865
No 363
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.07 E-value=6.8e-09 Score=102.07 Aligned_cols=279 Identities=18% Similarity=0.221 Sum_probs=146.3
Q ss_pred HHHHhhcCCC----eE-EecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccC-----CC-C
Q 012368 147 KRLVACSFAD----RV-FFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS-----KE-H 215 (465)
Q Consensus 147 ~~l~~~~~~~----~v-~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~-----~~-~ 215 (465)
+++++.++.+ .+ +=..||+.|+..++.++.. ++|+|+.++...-|+......... .. .
T Consensus 73 ~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~-----------pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~ 141 (399)
T PF00464_consen 73 ERAKELFGAEPKEWYANVQPHSGSQANLAVYMALLK-----------PGDTIMGLSLPHGGHLSHGSSVNFKKISASGLY 141 (399)
T ss_dssp HHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT------------TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHH
T ss_pred HHHHHHhCCCcccceEEeecCCchHHHHHHHHHHHh-----------hcCcEEecChhhcccccccccccccccccccce
Confidence 3445566655 32 3346899999998887663 799999998776455432211110 00 0
Q ss_pred cCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CCCC
Q 012368 216 YRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC-GLGR 294 (465)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~gr 294 (465)
+.....+..++... -|.+++++++...++++||+...... -+-.+++++++|++.|++|++|-.|. |+--
T Consensus 142 ~~~~~y~~d~~~~~---ID~d~l~~~a~~~kPklIi~G~S~y~------~~~d~~~~reIad~vga~l~~D~sH~~GLIa 212 (399)
T PF00464_consen 142 FESVPYPVDPDTGL---IDYDELEKLAKEHKPKLIICGASSYP------RPIDFKRFREIADEVGAYLMADISHIAGLIA 212 (399)
T ss_dssp SEEEEEEB-TTTSS---B-HHHHHHHHHHH--SEEEEE-SSTS------S---HHHHHHHHHHTT-EEEEE-TTTHHHHH
T ss_pred EEEEeeeeecCCCe---ECHHHHHHHHhhcCCCEEEECchhcc------CccCHHHHHHHHHhcCcEEEeccccccccee
Confidence 00000011111111 17899999887667889998875422 11227999999999999999999875 2311
Q ss_pred CCccccccccCCcccEEEec--ccCCCccceeeEEeC--------------HHHHhhccCCCCcCCCCChHHH-HHHHHH
Q 012368 295 TGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVT--------------EKVASAINYGDHGSTFAGSPLV-CNAAIA 357 (465)
Q Consensus 295 ~g~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~--------------~~i~~~~~~~~~~~t~~~~~~~-~~aa~a 357 (465)
.|. + ..-+.. .|++|.| |+|.| -+.|.++.+ +++.+.+......+..+++-.. .+|...
T Consensus 213 ~g~-~-~~P~~~-ADvvt~sThKtl~G-PrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAv 288 (399)
T PF00464_consen 213 GGL-F-PNPFPY-ADVVTGSTHKTLRG-PRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAV 288 (399)
T ss_dssp TTS-S---GCCT-SSEEEEESSGGG-S-SS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHH
T ss_pred hhe-e-cCcccc-ceEEEeeccccccc-cCceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHH
Confidence 121 1 122232 6899876 88865 366888888 7777777543222222222222 233333
Q ss_pred HHHHhcC---chHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEec---CChHHHHHHHHHCCceEeec----
Q 012368 358 VLDKISN---PAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFD---VSATPVVDACRDSGLLVLTA---- 427 (465)
Q Consensus 358 ~L~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~---~~~~~~~~~l~~~Gv~v~~~---- 427 (465)
+|....+ .++.+++.++.+.|.+.|.+. .+.++.. .....++++++. .+..+..+.|.+.||.+...
T Consensus 289 al~ea~~~~fk~Ya~qVv~NAk~La~~L~~~--G~~v~~g-gTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~ 365 (399)
T PF00464_consen 289 ALKEALSPEFKEYAKQVVKNAKALAEALQER--GFKVVTG-GTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPG 365 (399)
T ss_dssp HHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT--T-EEGGG-S-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TT
T ss_pred HHhcccCHHHHHHHHHHHHHHHHHHHHHhhC--CcEEEEC-CCCCCeEEEEecccccchHHHHHHHHhcCeeecccccCC
Confidence 4444333 356677777888887777664 3322221 122346677772 35567778888999998632
Q ss_pred CC----CCEEEEecC----CCCcHHHHHHHHHH
Q 012368 428 GK----GNVVRLVPP----LIISEQELDQAVEI 452 (465)
Q Consensus 428 ~~----~~~lRi~~~----~~~t~e~i~~~l~~ 452 (465)
.. ...+||..+ ....++|++++.+.
T Consensus 366 d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~ 398 (399)
T PF00464_consen 366 DRSPFVPSGLRLGTPALTRRGMKEEDMKEIAEL 398 (399)
T ss_dssp TSTTTT-SEEEEESHHHHHTT--HHHHHHHHHH
T ss_pred CCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhh
Confidence 11 246999754 33466777766554
No 364
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.06 E-value=3.9e-08 Score=90.17 Aligned_cols=338 Identities=17% Similarity=0.151 Sum_probs=203.6
Q ss_pred CEEEecccCcccccCCCCCHHHHHHHHHHHhhcc------ccc----CCCCCHHHHHHHHHHHhhcC--CCeEEecCCHH
Q 012368 98 REYLDLSSGIAVNALGHGDADWIKAVVDQANVLT------HVS----NMYYSIPQIELAKRLVACSF--ADRVFFSNTGT 165 (465)
Q Consensus 98 ~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~------~~~----~~~~~~~~~~la~~l~~~~~--~~~v~~~~sG~ 165 (465)
...+-+++| +||.-+..+.+.+.+.++++. |.. +...+++ ....++...| .+.|-++||-+
T Consensus 66 ~~~iYlcGN----SLGLmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~---il~l~~~iVGA~e~EvavmNsLT 138 (465)
T KOG3846|consen 66 KPVIYLCGN----SLGLMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEP---ILPLLAPIVGAQENEVAVMNSLT 138 (465)
T ss_pred CCeEEEecc----ccccCchhhHhHHHHHHHHHHhhhhhcccccccceeecchh---hhhhhhhhccCCchhhhhHhhhh
Confidence 334445544 689888888888887777642 111 1112232 3334555566 55788888776
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcC--CCCCCCCC--CceEeeCCCHHHHHhh
Q 012368 166 EANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYR--SPFEPVMP--GVNFVEYGNIEATRKL 241 (465)
Q Consensus 166 eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~d~~~le~~ 241 (465)
--+...+-...+-| +.|-+|+....+|+.......+........ ..+....+ +-..+ ..+++-+.
T Consensus 139 vNlh~Ll~sFyKPT--------ekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetl---RteDILd~ 207 (465)
T KOG3846|consen 139 VNLHSLLISFYKPT--------EKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETL---RTEDILDT 207 (465)
T ss_pred hHHHHHHHHhcCCc--------chhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccch---hHHHHHHH
Confidence 55555444333222 247789998888876665543321100000 00000001 00111 24555555
Q ss_pred cC--CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEecccCCC
Q 012368 242 IQ--PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAG 319 (465)
Q Consensus 242 l~--~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~lg~ 319 (465)
|+ .+.+|+|++..++--+|.... +.+|...-+..|+++-+|=++. +|- -......||+..-+.|--|.+..
T Consensus 208 IEkngDeiA~v~fSGvqyYTGQ~Fd----i~aIT~Agq~kgc~VGfDLAHA-vgN--VpL~LHdWgVDFACWCSYKYlna 280 (465)
T KOG3846|consen 208 IEKNGDEIALVCFSGVQYYTGQYFD----IGAITFAGQFKGCLVGFDLAHA-VGN--VPLQLHDWGVDFACWCSYKYLNA 280 (465)
T ss_pred HHhcCCeEEEEEeecceeecccccc----hhhhhhcccCCCcEechhhhhh-hcC--CceEEeecCCceEEEeeeccccc
Confidence 54 567999999999988887765 7777776677799999998886 432 23344456664444455588764
Q ss_pred c-cceeeEEeCHHHHhhccC------------------------CCCcCCCC-ChHHHHHHHHHHHHHhcCchHHHHHHH
Q 012368 320 G-LPIGAALVTEKVASAINY------------------------GDHGSTFA-GSPLVCNAAIAVLDKISNPAFLASVSK 373 (465)
Q Consensus 320 G-~~iG~v~~~~~i~~~~~~------------------------~~~~~t~~-~~~~~~~aa~a~L~~~~~~~~~~~~~~ 373 (465)
| -.||.+...+.......+ +..+.-.+ .+.+..+|....|++..+-. .+.+++
T Consensus 281 GaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~-~~~lRk 359 (465)
T KOG3846|consen 281 GAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFN-INELRK 359 (465)
T ss_pred CCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhh-HHHHhh
Confidence 3 244444443332221111 11122222 23345566677888775444 566777
Q ss_pred HHHHHHHHHHHHHHcC-----C-----------CceeeeccceEEEEEecCChHHHHHHHHHCCceEeecCCCCEEEEec
Q 012368 374 KGHYFKETLKQKLARN-----P-----------HVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVP 437 (465)
Q Consensus 374 ~~~~l~~~l~~~~~~~-----~-----------~~~~~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~ 437 (465)
+.-.|...|+.+++.. + ....+..+|.-+.+.|+.+...++++|.++||.+....+ +.+|+.|
T Consensus 360 rS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp~~~vfqeL~krGv~~DkR~P-NvIRvAP 438 (465)
T KOG3846|consen 360 RSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSPTPKVFQELHKRGVIGDKRRP-NVIRVAP 438 (465)
T ss_pred hhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCCCchHHHHHHHHcCeeccccCC-CceEeec
Confidence 7766666666654321 1 112345668888888877778899999999999877655 8999998
Q ss_pred -CCCCcHHHHHHHHHHHHHHHHHhhh
Q 012368 438 -PLIISEQELDQAVEILCKTLPVLDS 462 (465)
Q Consensus 438 -~~~~t~e~i~~~l~~l~~~l~~~~~ 462 (465)
++..+-.|+..++..|.+++..+..
T Consensus 439 vpLYN~f~Dvy~f~n~L~e~~d~~es 464 (465)
T KOG3846|consen 439 VPLYNTFSDVYIFVNALNEAMDKLES 464 (465)
T ss_pred chhhccHHHHHHHHHHHHHHHHHhhc
Confidence 7889999999999999999887653
No 365
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.04 E-value=3.1e-09 Score=104.90 Aligned_cols=225 Identities=18% Similarity=0.183 Sum_probs=126.9
Q ss_pred CHHHHHHHHHHHhhcCCCe-EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccC-CCCc
Q 012368 139 SIPQIELAKRLVACSFADR-VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS-KEHY 216 (465)
Q Consensus 139 ~~~~~~la~~l~~~~~~~~-v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~-~~~~ 216 (465)
.....+..+..++.+|.++ .+.+||.|.+|.+++.++.. ++++|++.. ..|-+...++.+++ .+.|
T Consensus 65 ~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~-----------~gd~VLv~R-N~HkSv~~alil~ga~Pvy 132 (417)
T PF01276_consen 65 EGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCR-----------PGDKVLVDR-NCHKSVYNALILSGAIPVY 132 (417)
T ss_dssp BTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTT-----------TTCEEEEET-T--HHHHHHHHHHTEEEEE
T ss_pred ccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcC-----------CCCEEEEcC-CcHHHHHHHHHHcCCeEEE
Confidence 3346677777888899555 55667778888888877662 577766655 45777776766554 3333
Q ss_pred CCCCCCCCCCc-eEeeCC--CHHHHHhhcC--CCCeE---EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecc
Q 012368 217 RSPFEPVMPGV-NFVEYG--NIEATRKLIQ--PGKTA---AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEV 288 (465)
Q Consensus 217 ~~~~~~~~~~~-~~~~~~--d~~~le~~l~--~~~~a---~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 288 (465)
..+. ....++ .-++.. +.+.++++|+ +...+ +||+.|.. .|+... +++|.++|+++++.|++||+
T Consensus 133 i~p~-~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY--~Gv~~d----i~~I~~~~h~~~~~llvDEA 205 (417)
T PF01276_consen 133 IPPE-DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY--YGVCYD----IKEIAEICHKHGIPLLVDEA 205 (417)
T ss_dssp EEEE-E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T--TSEEE-----HHHHHHHHCCTECEEEEE-T
T ss_pred ecCC-ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC--CeEEEC----HHHHHHHhcccCCEEEEEcc
Confidence 3221 101111 111111 3488988887 33334 66776643 355554 99999999999999999999
Q ss_pred ccC-CCCCCccccccccCCccc-------EEEec--ccCCCccceeeEEeCHHH-H--hhccC-CCCcCCCCChHHHHHH
Q 012368 289 QCG-LGRTGYLWAHEHYGIFPD-------IMTLA--KPLAGGLPIGAALVTEKV-A--SAINY-GDHGSTFAGSPLVCNA 354 (465)
Q Consensus 289 ~~g-~gr~g~~~~~~~~~~~pd-------i~t~s--K~lg~G~~iG~v~~~~~i-~--~~~~~-~~~~~t~~~~~~~~~a 354 (465)
+.. |+.. . +.........| +++-| |.+++=-..+++-.+.+. + +.+.. .....|.+.+-+-++.
T Consensus 206 hGah~~F~-~-lp~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmAS 283 (417)
T PF01276_consen 206 HGAHFGFH-P-LPRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMAS 283 (417)
T ss_dssp T-TTGGCS-G-GGTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHH
T ss_pred ccccccCC-C-CccchhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHH
Confidence 865 2222 2 22223344556 77766 887642233444443321 1 22221 1223344556555665
Q ss_pred HHHHHHHhc-C--chHHHHHHHHHHHHHHHHHH
Q 012368 355 AIAVLDKIS-N--PAFLASVSKKGHYFKETLKQ 384 (465)
Q Consensus 355 a~a~L~~~~-~--~~~~~~~~~~~~~l~~~l~~ 384 (465)
.-.+.+.++ . ..++++..+....+|+.+++
T Consensus 284 lD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~ 316 (417)
T PF01276_consen 284 LDVARAQMEEEEGRELLEEAIELAEEFRKKINR 316 (417)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 555555552 2 45788888888999998865
No 366
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.99 E-value=2.9e-07 Score=90.05 Aligned_cols=309 Identities=13% Similarity=0.061 Sum_probs=170.9
Q ss_pred CCHHHHHHHHHHHhhccc-------ccCCC--CCHHHHHHHHHHHhhcC-CC--eEEecCC-HHHHHHHHHHHHHHHhhh
Q 012368 115 GDADWIKAVVDQANVLTH-------VSNMY--YSIPQIELAKRLVACSF-AD--RVFFSNT-GTEANEAAIKFARKFQRH 181 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~-------~~~~~--~~~~~~~la~~l~~~~~-~~--~v~~~~s-G~eA~~~al~~a~~~t~~ 181 (465)
-|++|.+++.+.+..... .+.+. ......+..+.|.+.++ ++ +|+|..| |+.+.++++.-+..
T Consensus 15 lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~---- 90 (364)
T PRK12462 15 LPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSR---- 90 (364)
T ss_pred CCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCC----
Confidence 357888888877654211 11111 11225566677777776 22 5655555 88888887775541
Q ss_pred cCCCCCCCCceEE-EEcCCcccCcccccc--ccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCC
Q 012368 182 SNPDSKEPATEFV-SFTNSFHGRTMGALA--LTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGE 258 (465)
Q Consensus 182 ~~~~~~~~~~~ii-~~~~~yhg~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~ 258 (465)
++++++ +...++.|.-..-.. .+ ... ........+...+| +++.+ .+ +.+.+.|.+.++...
T Consensus 91 -------~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~--~~~~~~~~~~~~~p--~~~~~--~~-~~d~~~v~~t~NETs 155 (364)
T PRK12462 91 -------PGAAAPEYVTTGYWSRKAIGEASRVA-AMR--VVWDGAASGYRTLP--SLAEL--DW-DARAPFRHYVSNETV 155 (364)
T ss_pred -------CCCcEEEEEeCCHHHHHHHHHHHhcC-Cce--EecCcCCCCCCcCC--CHHHh--cc-CCCCcEEEEccCCCC
Confidence 456555 444444444322111 11 100 00000001111111 34443 12 224667777777777
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccCCCccceeeEEeCHHHHhhc
Q 012368 259 GGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAI 336 (465)
Q Consensus 259 ~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~ 336 (465)
.|+..+ ++.+.+++++|+|-+-+ ++ +..+-.+.+ |++..| |.+| .-.++.++.+++.++..
T Consensus 156 tGv~~~---------~~~~~~~~llvvD~sS~-~~--s~pid~~~~----dvi~agsQKnlg-P~Gltvvivs~~al~~~ 218 (364)
T PRK12462 156 EGLQFP---------DAAGLPDSPLIADMSSD-FM--SRPFDVEAY----GMVYAHAQKNLG-PAGVTVAIIRRALLERV 218 (364)
T ss_pred ceEecC---------cccccCCCeEEEEcCch-hh--CCCCChHHc----cEEEeeccccCC-CCceEEEEECHHHHhhc
Confidence 787654 23334699999998765 32 333334443 777655 9998 34567888899888765
Q ss_pred cCC-----------CCcCCCCC-hHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHHcCC----Cceeeeccc
Q 012368 337 NYG-----------DHGSTFAG-SPLVCNAAIAVLDKISNP-AFLASVSKKGHYFKETLKQKLARNP----HVKDVRGLG 399 (465)
Q Consensus 337 ~~~-----------~~~~t~~~-~~~~~~aa~a~L~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~----~~~~~~~~g 399 (465)
... ....+++. +.....+...+|+.+.++ +=++.+.++.+...+.|.+.++..+ .......+.
T Consensus 219 ~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS 298 (364)
T PRK12462 219 PDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARS 298 (364)
T ss_pred cccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcC
Confidence 431 12345544 455667788888887555 1234444444444444444444433 111222222
Q ss_pred eE-EEEEec--CChHHHHHHHHHCCceEeecCC-CCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 400 LI-IGIEFD--VSATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 400 ~~-~~i~~~--~~~~~~~~~l~~~Gv~v~~~~~-~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
.+ +.+.+. ....+|.+.+.++|+.-..++. -+.+|.++=-+++.|+++.+++-++++-++
T Consensus 299 ~mnv~f~~~~~~l~~~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 299 TMNVAFRFRQPRLDTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred cceEEEEcCCHHHHHHHHHHHHHCCCccccCCcccCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 22 223332 2356788999999998765543 133899887788999999988888776543
No 367
>PRK13578 ornithine decarboxylase; Provisional
Probab=98.91 E-value=2.1e-07 Score=97.74 Aligned_cols=297 Identities=14% Similarity=0.070 Sum_probs=161.4
Q ss_pred HHHHHHHHHHHhhcCCC-eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCcccc-cccc-CCCCc
Q 012368 140 IPQIELAKRLVACSFAD-RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGA-LALT-SKEHY 216 (465)
Q Consensus 140 ~~~~~la~~l~~~~~~~-~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~-~~~~-~~~~~ 216 (465)
....+..+..++.+|.+ ..+++||.|.+|.+++.++.. ++++|+ ++...|-+...+ +.++ ..+.|
T Consensus 174 G~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~-----------~Gd~VL-vdRN~HKSv~hgaLiLsGa~PVY 241 (720)
T PRK13578 174 GAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLT-----------PGDLVL-FDRNNHKSNHHGALIQAGATPVY 241 (720)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcC-----------CCCEEE-eecccHHHHHHHHHHHcCCeEEE
Confidence 33566666677788865 466678888888888876662 566555 556667777653 5444 44555
Q ss_pred CCCCCCCCCCc-eEeeCC--CHHHHHhhcCCC----------CeEEEEEcccCCCCCcccCCHHHHHHHHHH-HHHhCCE
Q 012368 217 RSPFEPVMPGV-NFVEYG--NIEATRKLIQPG----------KTAAVFVEPIQGEGGIYSATKEFLQFLRDA-CDDAGAL 282 (465)
Q Consensus 217 ~~~~~~~~~~~-~~~~~~--d~~~le~~l~~~----------~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~~g~l 282 (465)
..+-.. .-++ .-++.. +.+.++++|+.. -.++||+.|.. .|++.. +++|.++ |+.++ .
T Consensus 242 l~P~~n-~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY--dG~~yd----i~~I~~~~~h~~~-~ 313 (720)
T PRK13578 242 LETARN-PFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY--DGTIYN----ARQVVDKIGHLCD-Y 313 (720)
T ss_pred eecccc-ccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC--cceeec----HHHHHHHhhccCC-c
Confidence 432210 0111 011111 356688887632 13456666543 354443 7888888 68888 9
Q ss_pred EEEeccccCCCCCCcc---ccccccCCccc----EEEec--ccCCCccceeeEEeCH-------------HHHhhccCCC
Q 012368 283 LVFDEVQCGLGRTGYL---WAHEHYGIFPD----IMTLA--KPLAGGLPIGAALVTE-------------KVASAINYGD 340 (465)
Q Consensus 283 lI~DEv~~g~gr~g~~---~~~~~~~~~pd----i~t~s--K~lg~G~~iG~v~~~~-------------~i~~~~~~~~ 340 (465)
|++||++.+.-..... +........+| ++|-| |.+++=--.+++-.+. .+.+.+. .
T Consensus 314 llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~--m 391 (720)
T PRK13578 314 ILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFM--L 391 (720)
T ss_pred EEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHHH--H
Confidence 9999997653222221 11111233566 77666 8776411223332322 2222222 2
Q ss_pred CcCCCCChHHHHHHHHHHHHHhc---CchHHHHHHHHHHHHHHHHHHHHHcCCCce--ee--------------------
Q 012368 341 HGSTFAGSPLVCNAAIAVLDKIS---NPAFLASVSKKGHYFKETLKQKLARNPHVK--DV-------------------- 395 (465)
Q Consensus 341 ~~~t~~~~~~~~~aa~a~L~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~-------------------- 395 (465)
+ .|.+.+-+-++..-.+-..+. -..++++..+....+|+.|.+....+..+. .+
T Consensus 392 ~-qSTSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w 470 (720)
T PRK13578 392 H-ASTSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFF 470 (720)
T ss_pred H-cCCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhccccccc
Confidence 2 233344333333322233232 245777788888888887743322221110 00
Q ss_pred --------ecc-----------ceEEEEEe-cCC------------hHHHHHHHHHCCceEeecCCCCEEEEecCCCCcH
Q 012368 396 --------RGL-----------GLIIGIEF-DVS------------ATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISE 443 (465)
Q Consensus 396 --------~~~-----------g~~~~i~~-~~~------------~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~ 443 (465)
.|. .+=+.+.. ..+ +..+.+.|.++||.+--.+. ..+-+-++...|+
T Consensus 471 ~~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d~-~~vL~l~s~g~t~ 549 (720)
T PRK13578 471 SFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCDL-NSILFLLTPAEDM 549 (720)
T ss_pred ccccCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecCC-CeEEEEeCCCCCH
Confidence 000 00011111 112 56788889889999987765 5565666778899
Q ss_pred HHHHHHHHHHHHHHHHh
Q 012368 444 QELDQAVEILCKTLPVL 460 (465)
Q Consensus 444 e~i~~~l~~l~~~l~~~ 460 (465)
++++.++++|.++-+..
T Consensus 550 ~~~~~Lv~aL~~f~~~~ 566 (720)
T PRK13578 550 AKLQQLVAMLARFEKHI 566 (720)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999998775433
No 368
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.89 E-value=2.3e-07 Score=92.05 Aligned_cols=233 Identities=21% Similarity=0.220 Sum_probs=126.9
Q ss_pred HHHHHHHHHhhcC-C--------CeEEecCCHHHHHHHHHHHHHHHhhhcCCCCC-C-CCceEEEEcCCcccCccccccc
Q 012368 142 QIELAKRLVACSF-A--------DRVFFSNTGTEANEAAIKFARKFQRHSNPDSK-E-PATEFVSFTNSFHGRTMGALAL 210 (465)
Q Consensus 142 ~~~la~~l~~~~~-~--------~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~-~-~~~~ii~~~~~yhg~~~~~~~~ 210 (465)
+.++.+++++.++ + ..-+||+||++||..|+.++|.........+. . ..+.+++.+..-|-+..-+...
T Consensus 81 E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~ 160 (373)
T PF00282_consen 81 EREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARI 160 (373)
T ss_dssp HHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHH
T ss_pred hHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcce
Confidence 6677778888877 3 25789999999999999999865421100000 0 1234566666556555444443
Q ss_pred cCCCCcCCCCCCCCCCceEeeCC-----CHHHHHhhcC----CCC-eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC
Q 012368 211 TSKEHYRSPFEPVMPGVNFVEYG-----NIEATRKLIQ----PGK-TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAG 280 (465)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~----~~~-~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g 280 (465)
.+-. +..+|.+ |+++|+++|+ ... +.+|+..--....|.+-+ +++|+++|++|+
T Consensus 161 lGlg------------~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~----l~~i~~i~~~~~ 224 (373)
T PF00282_consen 161 LGLG------------VRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP----LEEIADICEKYN 224 (373)
T ss_dssp TTSE------------EEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S----HHHHHHHHHHCT
T ss_pred eeeE------------EEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccC----HHHHhhhccccc
Confidence 3222 2222221 7888988875 222 334444444444566544 999999999999
Q ss_pred CEEEEeccccCCCCCCccccccccCC-cccEEEec--ccCCCccceeeEEeCHH--HHhhcc--CCCCc-----------
Q 012368 281 ALLVFDEVQCGLGRTGYLWAHEHYGI-FPDIMTLA--KPLAGGLPIGAALVTEK--VASAIN--YGDHG----------- 342 (465)
Q Consensus 281 ~llI~DEv~~g~gr~g~~~~~~~~~~-~pdi~t~s--K~lg~G~~iG~v~~~~~--i~~~~~--~~~~~----------- 342 (465)
++|++|-++.|....-...-.-..++ ..|-++++ |.++..++.|+++.+.. +...+. .....
T Consensus 225 ~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~ 304 (373)
T PF00282_consen 225 IWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYD 304 (373)
T ss_dssp -EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGC
T ss_pred eeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccc
Confidence 99999999887311111111112233 35777654 99888899999988753 223231 11111
Q ss_pred ---CCCCC-hHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcCCC
Q 012368 343 ---STFAG-SPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPH 391 (465)
Q Consensus 343 ---~t~~~-~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 391 (465)
.++.+ -.........+|+.+..+.+.+.+++..+. .+.+.+.+.+.+.
T Consensus 305 ~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~-a~~l~~~l~~~~~ 356 (373)
T PF00282_consen 305 YGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIEL-ARYLADRLRKDPR 356 (373)
T ss_dssp EEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHTSTT
T ss_pred cccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHH-HHHHHHHHHhCCC
Confidence 12222 244455566667766566655555444332 3344444455553
No 369
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=98.82 E-value=1e-06 Score=92.57 Aligned_cols=293 Identities=11% Similarity=0.085 Sum_probs=162.4
Q ss_pred HHHHHHHHHHHhhcCCCe-EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccC-CCCcC
Q 012368 140 IPQIELAKRLVACSFADR-VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS-KEHYR 217 (465)
Q Consensus 140 ~~~~~la~~l~~~~~~~~-v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~-~~~~~ 217 (465)
....+..+..++.++.++ .+.+||.|.+|.+++.++.. ++++|+ ++...|-+...++.+++ .+.|.
T Consensus 195 G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~-----------~Gd~VL-vdRN~HKSv~~aLilsga~PVYl 262 (713)
T PRK15399 195 GPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAP-----------AGSTLL-IDRNCHKSLAHLLMMSDVVPIWL 262 (713)
T ss_pred hHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcC-----------CCCEEE-eecccHHHHHHHHHHcCCeeEEe
Confidence 335666667778888665 55667778888888876652 566555 55666777777766554 44444
Q ss_pred CCCCCCCCCce-EeeC--CCHHHHHhhcCCC-C----eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEE-EEecc
Q 012368 218 SPFEPVMPGVN-FVEY--GNIEATRKLIQPG-K----TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALL-VFDEV 288 (465)
Q Consensus 218 ~~~~~~~~~~~-~~~~--~d~~~le~~l~~~-~----~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~ll-I~DEv 288 (465)
.+... .-++. -++. -+.+.++++|+.. + .++||+.|.. .|++.. +++|.++| |+.+ ++||+
T Consensus 263 ~P~~n-~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY--dGi~yd----~~~I~~~~---g~~~ilvDEA 332 (713)
T PRK15399 263 KPTRN-ALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY--DGLLYN----TDWIKQTL---DVPSIHFDSA 332 (713)
T ss_pred ccccc-ccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC--CceeeC----HHHHHHHh---CCCEEEEecc
Confidence 32210 01110 0111 1348888888621 1 4677777633 355443 77788877 6766 69999
Q ss_pred ccCCCCCCcc----ccccccCCcccEE---Eec--ccCCCccceeeEEeCH-----HHHhhccCCCCcCCCCChHHHHHH
Q 012368 289 QCGLGRTGYL----WAHEHYGIFPDIM---TLA--KPLAGGLPIGAALVTE-----KVASAINYGDHGSTFAGSPLVCNA 354 (465)
Q Consensus 289 ~~g~gr~g~~----~~~~~~~~~pdi~---t~s--K~lg~G~~iG~v~~~~-----~i~~~~~~~~~~~t~~~~~~~~~a 354 (465)
+.+.-..... .+.. .+-.+|.+ |-| |.+++=-..+++-.+. .+.+.+. ...|.+.+-+-++.
T Consensus 333 hgah~~F~p~~~~~sam~-~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a~~---m~~STSPsY~LmAS 408 (713)
T PRK15399 333 WVPYTHFHPIYQGKSGMS-GERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFM---MHTSTSPSYPIVAS 408 (713)
T ss_pred chhhhhcCcccCCcChhh-CCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHHHH---HHcCCCcHHHHHHH
Confidence 8653222221 1111 11135666 444 8776411223333322 2222222 22333445444444
Q ss_pred HHHHHHHhc---CchHHHHHHHHHHHHHHHHHHHHHc-----CCCce----------------eeec-----------cc
Q 012368 355 AIAVLDKIS---NPAFLASVSKKGHYFKETLKQKLAR-----NPHVK----------------DVRG-----------LG 399 (465)
Q Consensus 355 a~a~L~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~-----~~~~~----------------~~~~-----------~g 399 (465)
.-.+...++ -..+.++..+....+|+.+.++... +..+. ...| ..
T Consensus 409 LD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP 488 (713)
T PRK15399 409 VETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDP 488 (713)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCC
Confidence 444444443 2457777888888888888765321 00000 0000 00
Q ss_pred eEEEEEe------------cCChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 400 LIIGIEF------------DVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 400 ~~~~i~~------------~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
+=+.+.. ..++..+.+.|.++||.+--.+. ..+-+.++...|+++++.+++.|.++-+.
T Consensus 489 ~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~-~~vL~l~s~g~t~~~~~~L~~aL~~f~~~ 559 (713)
T PRK15399 489 VKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGP-YNLLFLFSIGIDKTKAMGLLRGLTEFKRA 559 (713)
T ss_pred ceEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecCC-CeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 0011111 13456788899999999987765 55666677888999999999999876443
No 370
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.77 E-value=1e-05 Score=78.28 Aligned_cols=311 Identities=16% Similarity=0.151 Sum_probs=164.0
Q ss_pred cCCCCCHHHHH-HHHHHHhhcccccCCCCCHH-H------HHHHHHHHhhcCCC--eEEecCCHHHHHHHHHHHHHHHhh
Q 012368 111 ALGHGDADWIK-AVVDQANVLTHVSNMYYSIP-Q------IELAKRLVACSFAD--RVFFSNTGTEANEAAIKFARKFQR 180 (465)
Q Consensus 111 ~lGh~~p~v~~-a~~~~~~~~~~~~~~~~~~~-~------~~la~~l~~~~~~~--~v~~~~sG~eA~~~al~~a~~~t~ 180 (465)
.++|--|.|+. .+.+.-+-++. +++|..+- . -++-..++++.|.+ ..-....+|.+-++++.+.| .++
T Consensus 84 yY~~~~P~vI~rnile~pewyTa-YTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r-~~k 161 (450)
T COG0403 84 YYDTYTPPVILRNILENPEWYTA-YTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKR-VTK 161 (450)
T ss_pred ccCCcCcHHHHHHhhcCcccccc-CCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHH-hhc
Confidence 46664455544 66553332222 23343332 1 12333455666633 44455556655554444333 332
Q ss_pred hcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCC
Q 012368 181 HSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGG 260 (465)
Q Consensus 181 ~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G 260 (465)
.+++++++.... |..+..++.. ...+..-.+...+++|+++|++. ...++.++++.-.+..|.
T Consensus 162 -------~k~~~~~V~~~v-hpqt~~Vl~T--------ra~~~g~~i~~~~~~d~~~l~~~-~~~~~~gv~vQyP~~~G~ 224 (450)
T COG0403 162 -------KKRNKFLVPKDV-HPQTLDVLRT--------RAEGLGIEIEVVDADDLDDLESA-DDGDVFGVLVQYPNTFGI 224 (450)
T ss_pred -------CcCceEEecCCC-CHHHHHHHHh--------hcccCceEEEEeccchhhhhhhc-cccCeEEEEEecCCCCCc
Confidence 134666665544 5555444431 11233345566677799999998 655788888876654442
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEE--eccccCCCCCCccccccccCCcccEEE-----ecccCC-CccceeeEEeCHHH
Q 012368 261 IYSATKEFLQFLRDACDDAGALLVF--DEVQCGLGRTGYLWAHEHYGIFPDIMT-----LAKPLA-GGLPIGAALVTEKV 332 (465)
Q Consensus 261 ~~~~~~~~l~~l~~l~~~~g~llI~--DEv~~g~gr~g~~~~~~~~~~~pdi~t-----~sK~lg-~G~~iG~v~~~~~i 332 (465)
.. ..+++|.+.++++|+++|+ |=+--++ .-.+ .. ...||++ ||=.++ ||-..|++.++++.
T Consensus 225 ~~----~d~~~l~~~~h~~~al~~v~aDplaL~L--L~pP---Ge--~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~ 293 (450)
T COG0403 225 VE----EDLRALIEAAHSAGALVIVAADPLALGL--LKPP---GE--FGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEF 293 (450)
T ss_pred cc----hhHHHHHHHHhhcCCEEEEEechhHhhc--cCCc---cc--cCCceEEecCcccCCCcCCCCcceeeeeEhHhH
Confidence 33 2389999999999998875 3221111 1111 11 2356664 555566 46778888888888
Q ss_pred HhhccCCC----------------------------CcCCCCChHHHHHHHHH-HHHHhcCc---hHHHHHHHHHHHHHH
Q 012368 333 ASAINYGD----------------------------HGSTFAGSPLVCNAAIA-VLDKISNP---AFLASVSKKGHYFKE 380 (465)
Q Consensus 333 ~~~~~~~~----------------------------~~~t~~~~~~~~~aa~a-~L~~~~~~---~~~~~~~~~~~~l~~ 380 (465)
+..+-... -.+..+.|..-++-+.+ .+-.+..+ ++.+++.++..++.+
T Consensus 294 ~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~ 373 (450)
T COG0403 294 KRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAA 373 (450)
T ss_pred hhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 76552110 11222333222221111 12223333 334445555566666
Q ss_pred HHHHHHHcCCCceeeeccceEEEEEe--c-CChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHH
Q 012368 381 TLKQKLARNPHVKDVRGLGLIIGIEF--D-VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKT 456 (465)
Q Consensus 381 ~l~~~~~~~~~~~~~~~~g~~~~i~~--~-~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~ 456 (465)
+|++. +....+.....|-.+.+ + .....+.++....|+.++.-.. ..+-++..=.+|+++|+.+++.+...
T Consensus 374 ~L~~~----~~g~~~~~~~fFdt~~v~~~~~~~~~l~~~~~~~G~~L~~~~~-~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 374 GLKEI----GAGVELVFDHFFDTFTVRVPEEVAEALLAAAIAGGINLRRVDA-DTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred HHhhc----CCceEeccccceeeEEEecchhHHHHHHHHHHhcCCceeeecC-CceEEEeecccCHHHHHHHHHHHhhh
Confidence 66543 21111111233323333 3 2345566777778888876544 45667777778999999999888754
No 371
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.75 E-value=9.5e-06 Score=87.78 Aligned_cols=272 Identities=11% Similarity=0.077 Sum_probs=151.3
Q ss_pred HHHHHHHHhhcCCC--eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCC
Q 012368 143 IELAKRLVACSFAD--RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPF 220 (465)
Q Consensus 143 ~~la~~l~~~~~~~--~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 220 (465)
-++-..++++.|.+ ..-+..+++.+-++++.+.+. ++ .++++|++.+..+ ..+..++..- .
T Consensus 112 ~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~-~~-------~~~~~vlv~~~~h-P~~~~v~~t~--------a 174 (939)
T TIGR00461 112 LNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNV-SK-------KKANKFFVAKDLH-PQTKSVLHTR--------A 174 (939)
T ss_pred HHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHh-hc-------CCCCEEEECCCCC-cchHHHHHHH--------H
Confidence 35566678888855 557778888777755554332 21 0246777766554 4433222210 0
Q ss_pred CCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccc
Q 012368 221 EPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWA 300 (465)
Q Consensus 221 ~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~ 300 (465)
.+..-.+..+ |+++|++.+ +++++++ .+++..|.+.. +++|.++++++|+++|++--...++-.-.
T Consensus 175 ~~~g~~v~~~---~~~~l~~~~---~~~~v~~-q~Pn~~G~ied----~~~i~~~~h~~gal~~~~ad~~al~ll~~--- 240 (939)
T TIGR00461 175 KPFGIEVIVV---DCSDIKKAV---DVFGCLL-QYPATDGSILD----YKQLIDALHSHKSLVSVAADLMALTLLTP--- 240 (939)
T ss_pred HhcCcEEEEE---cHHHHhhcC---CEEEEEE-ECCCCCeEEec----HHHHHHHHHHcCCEEEEEechHHhCCcCC---
Confidence 1111223333 567777666 3555554 33345566643 89999999999999998654332211111
Q ss_pred ccccCCcccEEE-ecccCC----C-ccceeeEEeCHHHHhhccCCC-------C-------------------cCC--CC
Q 012368 301 HEHYGIFPDIMT-LAKPLA----G-GLPIGAALVTEKVASAINYGD-------H-------------------GST--FA 346 (465)
Q Consensus 301 ~~~~~~~pdi~t-~sK~lg----~-G~~iG~v~~~~~i~~~~~~~~-------~-------------------~~t--~~ 346 (465)
-. ++..||++ .+|.|| + |--.|++.+++++...+-... . ..| .+
T Consensus 241 Pg--e~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNIC 318 (939)
T TIGR00461 241 PG--HYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNIC 318 (939)
T ss_pred HH--HcCCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchh
Confidence 11 12357763 235443 2 445788888888776653210 0 011 11
Q ss_pred ChH-HHHHHHHHHHHHhcCch---HHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceE--EEEEec-CChHHHHHHHHH
Q 012368 347 GSP-LVCNAAIAVLDKISNPA---FLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLI--IGIEFD-VSATPVVDACRD 419 (465)
Q Consensus 347 ~~~-~~~~aa~a~L~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~--~~i~~~-~~~~~~~~~l~~ 419 (465)
.+. +...++...+..+..++ +.+++..+..++.+.|.+. .+.. +.. ..| +.+.++ .++.++.+.|.+
T Consensus 319 t~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~--G~~~---~~~-~fF~~~~v~~~~~~~~~i~~~~~~ 392 (939)
T TIGR00461 319 TAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEND--PHEL---INK-TWFDTLTVKVGNGISSELLKAAEE 392 (939)
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC--CCcc---cCC-CccceEEEEeCCCCHHHHHHHHHH
Confidence 121 11112222234444333 3444555666666666552 2211 111 222 223333 367889999999
Q ss_pred CCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHH
Q 012368 420 SGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILC 454 (465)
Q Consensus 420 ~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~ 454 (465)
+||.+..... +.+++++.-.+|++||+.+++.+.
T Consensus 393 ~gi~l~~~~~-~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 393 FNINLRAVDT-TTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred CCCeeeecCC-CEEEEEeecCCCHHHHHHHHHHhc
Confidence 9999876543 689999999999999999999994
No 372
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=98.75 E-value=6.3e-07 Score=94.16 Aligned_cols=293 Identities=14% Similarity=0.157 Sum_probs=162.8
Q ss_pred CHHHHHHHHHHHhhcCCCe-EEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccC-CCCc
Q 012368 139 SIPQIELAKRLVACSFADR-VFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTS-KEHY 216 (465)
Q Consensus 139 ~~~~~~la~~l~~~~~~~~-v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~-~~~~ 216 (465)
+....+..+..++.++.++ .+.+||.|.+|.+++.++.. ++++|+ ++...|-+...++.+++ .+.|
T Consensus 194 ~G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~-----------~Gd~VL-vdRN~HKSv~haLilsga~PVY 261 (714)
T PRK15400 194 SGPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAP-----------AGSTVL-IDRNCHKSLTHLMMMSDVTPIY 261 (714)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcC-----------CCCEEE-eecccHHHHHHHHHHcCCeEEE
Confidence 3345666667778888665 55667778888877776652 466555 66666877777766654 4444
Q ss_pred CCCCCCCCCCc-eEeeC--CCHHHHHhhcCC--C---CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecc
Q 012368 217 RSPFEPVMPGV-NFVEY--GNIEATRKLIQP--G---KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEV 288 (465)
Q Consensus 217 ~~~~~~~~~~~-~~~~~--~d~~~le~~l~~--~---~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 288 (465)
..+... .-++ .-++. -+.+.+++.|+. + ..++||+.|.. .|++.. +++|.++|+.++ |++||+
T Consensus 262 l~P~rn-~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY--dG~~yd----~~~I~~~~~~~~--ilvDEA 332 (714)
T PRK15400 262 FRPTRN-AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY--DGLLYN----TDFIKKTLDVKS--IHFDSA 332 (714)
T ss_pred eccccc-ccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC--ccEecC----HHHHHHHhCCCC--EEEEcc
Confidence 432210 0111 01111 147889998862 1 12577777743 355443 789999998887 689999
Q ss_pred ccCCCCCCccc----cccccCCcc-c--EEEec--ccCCC---c--cce-eeEEeCHHHHhhccCCCCcCCCCChHHHHH
Q 012368 289 QCGLGRTGYLW----AHEHYGIFP-D--IMTLA--KPLAG---G--LPI-GAALVTEKVASAINYGDHGSTFAGSPLVCN 353 (465)
Q Consensus 289 ~~g~gr~g~~~----~~~~~~~~p-d--i~t~s--K~lg~---G--~~i-G~v~~~~~i~~~~~~~~~~~t~~~~~~~~~ 353 (465)
+.+.-.....+ +.. .+-.+ | ++|-| |.+++ + +-+ |. +-.+.+.+.+. ...|.+.+-+-++
T Consensus 333 wgah~~F~p~~~~~sam~-~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~-vd~~~~n~a~~---m~~STSPsY~l~A 407 (714)
T PRK15400 333 WVPYTNFSPIYEGKCGMS-GGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD-VNEETFNEAYM---MHTTTSPHYGIVA 407 (714)
T ss_pred chhhhccCcccCCcChhh-cCCCCCCceEEEEchhhcccchhHHhHHHHcCC-CCHHHHHHHHH---HHcCCCcHHHHHH
Confidence 86632222211 111 12111 3 56655 87764 1 111 21 11123333332 2233344544444
Q ss_pred HHHHHHHHhc---CchHHHHHHHHHHHHHHHHHHHHHc-----CCCce--ee--------------ecc-----------
Q 012368 354 AAIAVLDKIS---NPAFLASVSKKGHYFKETLKQKLAR-----NPHVK--DV--------------RGL----------- 398 (465)
Q Consensus 354 aa~a~L~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~-----~~~~~--~~--------------~~~----------- 398 (465)
..-.+...++ -..+.++..+....+|+.|.++... +..+. .+ .+.
T Consensus 408 SLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lD 487 (714)
T PRK15400 408 STETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLD 487 (714)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccC
Confidence 4444444443 2456777888888888888664210 00000 00 000
Q ss_pred ceEEEEEe------------cCChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 399 GLIIGIEF------------DVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 399 g~~~~i~~------------~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
.+=+.+.. ..++..+.+.|.++||.+--.+. ..+-+.++...|+++++.+++.|.++-+
T Consensus 488 P~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~-~~iLfl~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 488 PIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGP-YNLLFLFSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred CceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecCC-CeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 00011111 12356788899999999987765 5566667888999999999999987644
No 373
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.74 E-value=6.7e-07 Score=86.47 Aligned_cols=224 Identities=14% Similarity=0.075 Sum_probs=136.3
Q ss_pred CCHHHHHHHHHHHhhcccc----cCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 012368 115 GDADWIKAVVDQANVLTHV----SNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPA 190 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~----~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~ 190 (465)
-+|++++++.+.+...... ..+....-...+++.++...+.+.+.++|.-+.|+..++.... .+
T Consensus 39 ~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~------------~~ 106 (395)
T COG1921 39 YSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALA------------EG 106 (395)
T ss_pred CCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhc------------cC
Confidence 4588999988887653221 0111112234566666666678889999998888887766444 23
Q ss_pred ceEEEEcC----CcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEE-EEcccCCCCCcccCC
Q 012368 191 TEFVSFTN----SFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAV-FVEPIQGEGGIYSAT 265 (465)
Q Consensus 191 ~~ii~~~~----~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~v-i~ep~~~~~G~~~~~ 265 (465)
..+|+.-+ ++|-.....+...|..... +.........+++.+|.++....+ +..++.+-.+.+ +
T Consensus 107 ~EvVis~g~lV~gg~~~v~d~~~~aG~~l~E---------vG~tn~t~~~d~~~AIne~ta~llkV~s~~~~f~~~l-~- 175 (395)
T COG1921 107 KEVVVSRGELVEGGAFRVPDIIRLAGAKLVE---------VGTTNRTHLKDYELAINENTALLLKVHSSNYGFTGML-S- 175 (395)
T ss_pred CeEEEEccccccCCCCChhHHHHHcCCEEEE---------ecccCcCCHHHHHHHhccCCeeEEEEeeccccccccc-c-
Confidence 34444322 3333333333333222111 001111257889999986443333 344444444443 3
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEEec--ccCCCccceeeEEeCHHHHhhccCCCCcC
Q 012368 266 KEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAINYGDHGS 343 (465)
Q Consensus 266 ~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~~~~~~~ 343 (465)
++++.++|++||+++|+|..-...-+ -..-........+|+++|| |-|+ |.+.|.++|++++++.++......
T Consensus 176 ---~~~l~~ia~~~~lpvivD~aSg~~v~-~e~~l~~~la~GaDLV~~SgdKllg-GPqaGii~GkKelI~~lq~~~l~R 250 (395)
T COG1921 176 ---EEELVEIAHEKGLPVIVDLASGALVD-KEPDLREALALGADLVSFSGDKLLG-GPQAGIIVGKKELIEKLQSHPLKR 250 (395)
T ss_pred ---HHHHHHHHHHcCCCEEEecCCccccc-cccchhHHHhcCCCEEEEecchhcC-CCccceEechHHHHHHHHhhhhhh
Confidence 78899999999999999986422211 1111233345568999998 7675 456899999999999987544444
Q ss_pred CCCChHHHHHHHHHHHHHhcCch
Q 012368 344 TFAGSPLVCNAAIAVLDKISNPA 366 (465)
Q Consensus 344 t~~~~~~~~~aa~a~L~~~~~~~ 366 (465)
.+-......++..++|+.+..++
T Consensus 251 alrv~K~tla~l~~aLe~y~~~~ 273 (395)
T COG1921 251 ALRVDKETLAALEAALELYLQPE 273 (395)
T ss_pred hhhcCcHhHHHHHHHHHHHcCch
Confidence 45567788899999999876644
No 374
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.74 E-value=1.5e-08 Score=96.91 Aligned_cols=222 Identities=15% Similarity=0.119 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHhhccccc----CCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCce
Q 012368 117 ADWIKAVVDQANVLTHVS----NMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATE 192 (465)
Q Consensus 117 p~v~~a~~~~~~~~~~~~----~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ 192 (465)
|++.+++.+.+..+..-- .+---..+..+++.+++..+.+..+++|+...|+.+++.... .+.+
T Consensus 20 ~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la------------~~~E 87 (367)
T PF03841_consen 20 EEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELTGAEAALVVNNNAAAVLLALNTLA------------KGKE 87 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc------------cccc
Confidence 667777777655422110 000001134566677788889999999999999988877554 2445
Q ss_pred EEEEcCCc---ccC--ccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCC-CCcc-cCC
Q 012368 193 FVSFTNSF---HGR--TMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGE-GGIY-SAT 265 (465)
Q Consensus 193 ii~~~~~y---hg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~-~G~~-~~~ 265 (465)
||+..+.- -|. ....+..+|..... +.......+++.+++|.+++.+++.+-+.|.. -|.. .++
T Consensus 88 vIvsRGelVeiGgsFRip~vm~~sGa~lvE---------VGttN~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~ 158 (367)
T PF03841_consen 88 VIVSRGELVEIGGSFRIPDVMRQSGARLVE---------VGTTNRTHLSDYEKAITENTAALLKVHTSNFRIQGFTGEVS 158 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccc---------ccccccccccccccccccccccccccccccccccccccccc
Confidence 55543321 111 11222222211111 11111124678899998654444566654443 2211 112
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccc------cCCCCCCccccccccCCcccEEEec--ccCCCccceeeEEeCHHHHhhcc
Q 012368 266 KEFLQFLRDACDDAGALLVFDEVQ------CGLGRTGYLWAHEHYGIFPDIMTLA--KPLAGGLPIGAALVTEKVASAIN 337 (465)
Q Consensus 266 ~~~l~~l~~l~~~~g~llI~DEv~------~g~gr~g~~~~~~~~~~~pdi~t~s--K~lg~G~~iG~v~~~~~i~~~~~ 337 (465)
++++.+++++|++++|+|-.- +.+|-.++.-..+......|+++|| |-+||. ..|.+++++++++.++
T Consensus 159 ---~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGP-QaGiI~Gkk~lI~~lk 234 (367)
T PF03841_consen 159 ---LEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGP-QAGIIVGKKELIEKLK 234 (367)
T ss_dssp -----HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS--S-EEEEEEHHHHHHHH
T ss_pred ---HHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCC-CeEEEEeCHHHHHHHh
Confidence 899999999999999999643 1122222333334445568999998 777764 4699999999999887
Q ss_pred CCCCcCCCCChHHHHHHHHHHHHHhc
Q 012368 338 YGDHGSTFAGSPLVCNAAIAVLDKIS 363 (465)
Q Consensus 338 ~~~~~~t~~~~~~~~~aa~a~L~~~~ 363 (465)
.......+-..-+.+++..++|+.+.
T Consensus 235 ~~pl~RalrvdK~tla~L~atL~~Y~ 260 (367)
T PF03841_consen 235 KHPLGRALRVDKLTLAALEATLRLYL 260 (367)
T ss_dssp HHHHTTT-B--HHHHHHHHHHHHH--
T ss_pred hCCCcceEeeCHHHHHHHHHHHHHHH
Confidence 43334445567788888888888754
No 375
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.72 E-value=3e-07 Score=86.57 Aligned_cols=278 Identities=15% Similarity=0.112 Sum_probs=146.1
Q ss_pred HHHHHHHHHhhc---C-----CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCC
Q 012368 142 QIELAKRLVACS---F-----ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSK 213 (465)
Q Consensus 142 ~~~la~~l~~~~---~-----~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 213 (465)
..+|++.|.+++ | ...|+|.+|+++-+.+|+-++..... . ..+.-+|+...|.|..+....--...
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~--~---~~~p~~VVa~aPYY~~Y~~qt~~f~s- 118 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNAS--P---SSSPASVVAAAPYYSSYPEQTDFFDS- 118 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT---T---TSSSEEEEE-SS--CHHHHHCCCT-B-
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCC--C---CCCCceeEecCCCccchHHHHHhccc-
Confidence 455666655544 4 34799999999998888876543210 0 01456899999998655432211100
Q ss_pred CCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Q 012368 214 EHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLG 293 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g 293 (465)
....+. .|.......=.+....=+++.|+||.|...- .+++.-+..+|.|-+|----
T Consensus 119 -----------~~y~w~--Gda~~~~~~~~~~~~IElVTSPNNPDG~lr~----------~V~~g~~~k~I~D~AYYWPh 175 (363)
T PF04864_consen 119 -----------RLYKWA--GDASNFKNSDNPSPYIELVTSPNNPDGQLRE----------AVLNGSSGKVIHDLAYYWPH 175 (363)
T ss_dssp -----------TTEEEE--EECCCGTT-S-CCGEEEEEESS-TTT----------------SSTTTEEEEEEE-TT-STT
T ss_pred -----------cCcccc--ccHHhhccCCCCCCeEEEEeCCCCCcccccc----------hhcCCCCcceeeeeeeeccc
Confidence 001110 0111111000123456678889888774332 13455566789999875221
Q ss_pred CCCccccccccCCcccEE--EecccCC-CccceeeEEeCH-HHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcC-----
Q 012368 294 RTGYLWAHEHYGIFPDIM--TLAKPLA-GGLPIGAALVTE-KVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN----- 364 (465)
Q Consensus 294 r~g~~~~~~~~~~~pdi~--t~sK~lg-~G~~iG~v~~~~-~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~----- 364 (465)
++.... ...-||+ |+||.-| +|-|+||.+.++ ++.+.+......+|.+.+-=+|.-++..|+.+.+
T Consensus 176 yTpI~~-----~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~ 250 (363)
T PF04864_consen 176 YTPITA-----PADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTE 250 (363)
T ss_dssp TS---S------B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHH
T ss_pred ccccCC-----CCCCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCC
Confidence 221111 1234665 7899888 699999999975 5666655444456777777778777777776421
Q ss_pred ---chHHHHHHHHHHHHHHHHHHHHHcCCCc--------------eeeeccceEEEEEecCC-hHHHHHHHHHCCceEee
Q 012368 365 ---PAFLASVSKKGHYFKETLKQKLARNPHV--------------KDVRGLGLIIGIEFDVS-ATPVVDACRDSGLLVLT 426 (465)
Q Consensus 365 ---~~~~~~~~~~~~~l~~~l~~~~~~~~~~--------------~~~~~~g~~~~i~~~~~-~~~~~~~l~~~Gv~v~~ 426 (465)
.++.+--.+..+..-+.|++++..-..+ ......+.|.|+.+..+ .......|++.||+.+.
T Consensus 251 ~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~DC~~~l~~~~I~tr~ 330 (363)
T PF04864_consen 251 KGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDEDCYAVLREAKIITRS 330 (363)
T ss_dssp TTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCGGSSHHHHHHCTTEEEEE
T ss_pred CCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcccccHHHHHHhCCcccCC
Confidence 1344433333333334455554332211 12335578899998533 34456667788888876
Q ss_pred cC----CCCEEEEecCCCCcHHHHHHHHHHHHH
Q 012368 427 AG----KGNVVRLVPPLIISEQELDQAVEILCK 455 (465)
Q Consensus 427 ~~----~~~~lRi~~~~~~t~e~i~~~l~~l~~ 455 (465)
+. ...++|+ ++..++++.+.++++|..
T Consensus 331 G~~fga~~ryVRl--Sml~~~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 331 GVLFGADSRYVRL--SMLKRDDDFDQLLERLSK 361 (363)
T ss_dssp GGGGTS-TTEEEE--ESSS-HHHHHHHHHHHHC
T ss_pred CCccCCCCCeEEE--eccCCHHHHHHHHHHHHh
Confidence 53 2478988 567899999999999974
No 376
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.61 E-value=2.8e-05 Score=73.39 Aligned_cols=341 Identities=16% Similarity=0.184 Sum_probs=187.8
Q ss_pred CCEEEecccCcccccCCCCCHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHH
Q 012368 97 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAIKFAR 176 (465)
Q Consensus 97 G~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~ 176 (465)
+.-+||+....++... ...-..|+..-=+ .+..+.....|++.+.+.+|.+.++.+.-|-.|-...+..++
T Consensus 45 edv~IDLLTDSGTgam---s~~qwaamm~GDE------AYagsrs~~~L~~avkdifGfq~~iPthQGRgAE~Il~~i~i 115 (471)
T COG3033 45 EDVFIDLLTDSGTGAM---TDKQWAAMMRGDE------AYAGSRSYYALADAVKDIFGFQYTIPTHQGRGAENILIPILI 115 (471)
T ss_pred cceEEEeeccCCcccc---cHHHHHHHhccch------hhcccccHHHHHHHHHHhcCceeeeeccCCccHHHHHHHHHh
Confidence 3568998877664322 2223333332111 112334467899999999999999999888777666666555
Q ss_pred HHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCc-eEeeCC---CHHHHHhhcC---CCCeEE
Q 012368 177 KFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGV-NFVEYG---NIEATRKLIQ---PGKTAA 249 (465)
Q Consensus 177 ~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---d~~~le~~l~---~~~~a~ 249 (465)
... +..++.+.+++++.|.-.+.+-....+... +..+.+...+. .-.||. |++.|+++|+ .+.+..
T Consensus 116 k~~------~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~-~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~ 188 (471)
T COG3033 116 KKG------EQEPGSKMVAFSNYHFDTTRGHIQINGATP-RNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPY 188 (471)
T ss_pred hhc------cccCCccccccccceecchhHHHHhcCCcc-ccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcE
Confidence 311 112567888888877766655544333211 11111111111 123332 8999999997 334555
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC----CCCCCc----cccccc-----cCCcccEEEec-c
Q 012368 250 VFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG----LGRTGY----LWAHEH-----YGIFPDIMTLA-K 315 (465)
Q Consensus 250 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g----~gr~g~----~~~~~~-----~~~~pdi~t~s-K 315 (465)
|++.-.+++.|.-+-+-+-+++++++|++||+.++.|-+-.- |-..-. .|+... +. ..|-.++| |
T Consensus 189 I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~s-YaD~~~mS~K 267 (471)
T COG3033 189 IVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYS-YADGCTMSAK 267 (471)
T ss_pred EEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHh-hhhhheeecc
Confidence 544443444444566889999999999999999999986320 111100 011110 00 23555665 3
Q ss_pred cCCCccce-eeEEeCHH----HHhhccCC----CCcCCCCC-hHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 012368 316 PLAGGLPI-GAALVTEK----VASAINYG----DHGSTFAG-SPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQK 385 (465)
Q Consensus 316 ~lg~G~~i-G~v~~~~~----i~~~~~~~----~~~~t~~~-~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~ 385 (465)
.=+ =..+ |++..+.+ +....+.. ....||++ ..-.+.|....|...-+.+++++-.+..++|.+.|++.
T Consensus 268 KD~-lvnmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~Qv~YL~~~l~~~ 346 (471)
T COG3033 268 KDG-LVNMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVAQVQYLADGLEEA 346 (471)
T ss_pred ccc-eeccccEEEecCccHHHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhc
Confidence 211 1233 45555544 33333221 12234432 22344444455655445666676667777888888775
Q ss_pred HHcCCCceeeeccceEEEEEe----c------CChHHHHHHHH-HCCceEeecC-------C---------CCEEEEecC
Q 012368 386 LARNPHVKDVRGLGLIIGIEF----D------VSATPVVDACR-DSGLLVLTAG-------K---------GNVVRLVPP 438 (465)
Q Consensus 386 ~~~~~~~~~~~~~g~~~~i~~----~------~~~~~~~~~l~-~~Gv~v~~~~-------~---------~~~lRi~~~ 438 (465)
..|++..+.|.+. .++. + -++..|+-+|. +.||-....| . -..+|+.+|
T Consensus 347 --GVpi~~paGGHav--fvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltip 422 (471)
T COG3033 347 --GVPIVQPAGGHAV--FVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIP 422 (471)
T ss_pred --CCeeEecCCCceE--EeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEecc
Confidence 4443333333333 3332 1 23556666665 4566554221 0 146899887
Q ss_pred C-CCcHHHHHHHHHHHHHHHHH
Q 012368 439 L-IISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 439 ~-~~t~e~i~~~l~~l~~~l~~ 459 (465)
- +-|.+++|..++.+++..++
T Consensus 423 RrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 423 RRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred ccccchhHHHHHHHHHHHHHhc
Confidence 4 45889999999999887764
No 377
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.51 E-value=2.7e-05 Score=77.27 Aligned_cols=275 Identities=19% Similarity=0.207 Sum_probs=124.0
Q ss_pred HHHHHHHHHhhcCCCeE--EecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCC
Q 012368 142 QIELAKRLVACSFADRV--FFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSP 219 (465)
Q Consensus 142 ~~~la~~l~~~~~~~~v--~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 219 (465)
.-++-..++++.|.+-+ -+-.+++.+-+.++ ++...++ ..+++|++.+.. |+.+..++....
T Consensus 112 lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~-ma~r~~~-------~~~~~vlv~~~~-hP~~~~v~~t~a------- 175 (429)
T PF02347_consen 112 LFEYQSMICELTGMDVANASLYDGATAAAEAML-MAVRATK-------RKRNKVLVPESL-HPQTRAVLRTYA------- 175 (429)
T ss_dssp HHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHH-HHHHHHT-------T---EEEEETTS--CHHHHHHHHHC-------
T ss_pred HHHHHHHHHHhhCCCccCCCCCChhHHHHHHHH-HHHHhcc-------cCCcEEEEcCCc-ChhhHHHHHHhh-------
Confidence 44677788888887754 55556665556543 3433432 023567766654 555544332111
Q ss_pred CCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccc
Q 012368 220 FEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLW 299 (465)
Q Consensus 220 ~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~ 299 (465)
.+..-++..+|..+-... +++++++|++.-.+. -|.+-. +++|.++++++|+++|+ -+ ..--.+-.-
T Consensus 176 -~~~g~~iv~~~~~~~~~~----d~~~~a~v~vq~Pn~-~G~~ed----~~~i~~~~h~~gal~~~-~a--d~~aL~~l~ 242 (429)
T PF02347_consen 176 -APLGIEIVEVPLDEDGTT----DDDDTAAVMVQNPNT-FGVFED----IKEIADIAHAAGALVIV-GA--DPNALGGLK 242 (429)
T ss_dssp -CHCCEEEEEE-BBTTCSB-----STTEEEEEEESS-T-TSB--T----HHHHHHHHHHTT-EEEE-CG--GCCGCCTC-
T ss_pred -hhCCeEEEEecccccCCc----cccCeEEEEeecCCC-CceEee----HHHHHHHHHHcCCEEEE-ec--CHHHHhCcC
Confidence 111223334443221110 045788887765443 455432 99999999999999987 22 111111111
Q ss_pred cccccCCcccEEE-ecccCC-----CccceeeEEeCHHHHhhccCC----------C------------------CcCCC
Q 012368 300 AHEHYGIFPDIMT-LAKPLA-----GGLPIGAALVTEKVASAINYG----------D------------------HGSTF 345 (465)
Q Consensus 300 ~~~~~~~~pdi~t-~sK~lg-----~G~~iG~v~~~~~i~~~~~~~----------~------------------~~~t~ 345 (465)
.-..+| .||++ .+|.|| ||--.|++.++++++..+-.. . -.+.+
T Consensus 243 ~Pge~G--ADI~vg~~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNI 320 (429)
T PF02347_consen 243 SPGEYG--ADIVVGEHQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNI 320 (429)
T ss_dssp -GGGGT---SEEEECCTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT--
T ss_pred ChhhcC--ccEEeeCCCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhh
Confidence 111223 57774 356665 246778888888877665211 0 11223
Q ss_pred CChHHHH-HHHHHHHHHhcCc---hHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEE-ecCC--hHHHHHHHH
Q 012368 346 AGSPLVC-NAAIAVLDKISNP---AFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIE-FDVS--ATPVVDACR 418 (465)
Q Consensus 346 ~~~~~~~-~aa~a~L~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~-~~~~--~~~~~~~l~ 418 (465)
+.|..-+ .++...+..+..+ ++.++...+..++.++|.+. -..+ +...-.+-.+. .... ..++.+++.
T Consensus 321 ctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~-~~~~----~~~~~f~e~v~~~~~~~~~~~l~~~~~ 395 (429)
T PF02347_consen 321 CTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI-YGLP----FDNPFFFEFVVVFSKDKEVEELLKRGI 395 (429)
T ss_dssp -SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT-TBEC----SSSSSBSSEEEEESS-HHHHHHHHTT-
T ss_pred hhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh-cCcc----cCCCCceeeeeecCCcHHHHHHHHHHH
Confidence 3343332 2333334444343 34455556666666666553 1111 11111111111 1122 122444444
Q ss_pred HCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHH
Q 012368 419 DSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEIL 453 (465)
Q Consensus 419 ~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l 453 (465)
..|+....... +.+-+++.=.+|++|||++++.|
T Consensus 396 ~~gl~~~~~~~-~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 396 EGGLNLRYPDD-GALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp ---EEEGGG-S-SEEEEE--TT--HHHHHHHHH--
T ss_pred hcCCCccccCC-CeEEEEccCCCCHHHHHHHHhcC
Confidence 45644433333 57888888889999999999865
No 378
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.45 E-value=4.2e-05 Score=77.62 Aligned_cols=158 Identities=22% Similarity=0.214 Sum_probs=94.7
Q ss_pred HHHHHHHHHHhhcCCC-eEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCcccccccc-CCCCcCC
Q 012368 141 PQIELAKRLVACSFAD-RVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALT-SKEHYRS 218 (465)
Q Consensus 141 ~~~~la~~l~~~~~~~-~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~-~~~~~~~ 218 (465)
...+..+..++.++.+ ..+.+||.|.||..++.++.. +||+|++..+ .|-+....+.++ ..+.|..
T Consensus 71 ~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~-----------~GD~VLvdRN-~HKSi~~glilaGa~Pvyl~ 138 (557)
T COG1982 71 PIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLT-----------PGDKVLVDRN-CHKSIHHGLILAGATPVYLE 138 (557)
T ss_pred cHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcC-----------CCCEEEecCC-ccHHHHHHHHHcCCceEEec
Confidence 3566667777788866 567778888888888876662 5776666555 466665555444 3444443
Q ss_pred CCCCCCCCceEeeCCCHHHHHhhcCCCC---eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC-CCC
Q 012368 219 PFEPVMPGVNFVEYGNIEATRKLIQPGK---TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCG-LGR 294 (465)
Q Consensus 219 ~~~~~~~~~~~~~~~d~~~le~~l~~~~---~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g-~gr 294 (465)
+... +...++---+.+.+++.+..+. ..+|+.+|.. .|+... +++|.+.+.++++++.+||.+-- ++.
T Consensus 139 p~~n--p~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY--dGv~~n----~~~i~~~~~~~~a~v~~deah~~~~~~ 210 (557)
T COG1982 139 PSRN--PLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY--DGVCYN----LRKIVELLHHYGAWVLYDEAHPAHFDF 210 (557)
T ss_pred CCCC--ccccccCCCCHHHHHHHHHhChhhheeEEEecCcc--ceEeec----HHHHHHHHhhcCceEEhhhcCcccccc
Confidence 2211 1111111126788887765322 4567766643 354443 88999999999999999998642 222
Q ss_pred CCccccccccCCcccEEEec--ccCCC
Q 012368 295 TGYLWAHEHYGIFPDIMTLA--KPLAG 319 (465)
Q Consensus 295 ~g~~~~~~~~~~~pdi~t~s--K~lg~ 319 (465)
.+.... .......|++|-| |.+++
T Consensus 211 ~~~l~~-~~~~~~~~~~tqS~HK~l~a 236 (557)
T COG1982 211 SPMLPE-SALNGGADFVTQSTHKLLAA 236 (557)
T ss_pred cccCcc-hhhhcCceEEEechhhhhhh
Confidence 222211 1112345777766 66654
No 379
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.41 E-value=2e-05 Score=82.26 Aligned_cols=40 Identities=20% Similarity=0.152 Sum_probs=33.0
Q ss_pred CHHHHHHHHHHHhhcC--CCeEEecCCHHHHHHHHHHHHHHH
Q 012368 139 SIPQIELAKRLVACSF--ADRVFFSNTGTEANEAAIKFARKF 178 (465)
Q Consensus 139 ~~~~~~la~~l~~~~~--~~~v~~~~sG~eA~~~al~~a~~~ 178 (465)
+..+.++.++|++.+| ...-.||+|||+||..|+.+||..
T Consensus 122 t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~ 163 (608)
T TIGR03811 122 SQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNI 163 (608)
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHh
Confidence 3447888899999988 335679999999999999999964
No 380
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.40 E-value=2.3e-05 Score=74.67 Aligned_cols=204 Identities=17% Similarity=0.137 Sum_probs=114.0
Q ss_pred CCHHHHHHHHHH-Hhhc-ccccC--CCCCHHHHHHHHHHHhhcCCCeEEe---cCCHHHHHHHHHHHHHHHhhhcCCCCC
Q 012368 115 GDADWIKAVVDQ-ANVL-THVSN--MYYSIPQIELAKRLVACSFADRVFF---SNTGTEANEAAIKFARKFQRHSNPDSK 187 (465)
Q Consensus 115 ~~p~v~~a~~~~-~~~~-~~~~~--~~~~~~~~~la~~l~~~~~~~~v~~---~~sG~eA~~~al~~a~~~t~~~~~~~~ 187 (465)
|..+|.+|+++. +... -.+++ +|.+..++.|.+-.++.++.|..++ ..|||.|+..++...+.
T Consensus 25 Nq~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~Lr---------- 94 (403)
T PF06838_consen 25 NQLKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLR---------- 94 (403)
T ss_dssp HHHHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH------------
T ss_pred HHHHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCC----------
Confidence 445677777663 2211 11112 2345558899999999999776554 35899999999987763
Q ss_pred CCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeC-----CCHHHHHhhcCCCCeEEEEEcccCCCCCcc
Q 012368 188 EPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEY-----GNIEATRKLIQPGKTAAVFVEPIQGEGGIY 262 (465)
Q Consensus 188 ~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~a~vi~ep~~~~~G~~ 262 (465)
|+|+++...+.=.-....++.+.+... ..+....-....++. -|.+.+++++++ ++++|++--.-+-..--
T Consensus 95 -pGD~ll~~tG~PYDTL~~VIG~~g~~~--GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~~-~tk~v~IQRSrGYs~R~ 170 (403)
T PF06838_consen 95 -PGDELLSITGKPYDTLEEVIGIRGNGP--GSLKEFGIKYREVPLTEDGTIDWEAIKKALKP-NTKMVLIQRSRGYSWRP 170 (403)
T ss_dssp -TT-EEEESSSS--CCHHHHHTSSSSSS--SSTGGGT-EEEE--B-TTSSB-HHHHHHHHHT-TEEEEEEE-S-TTSSS-
T ss_pred -CCCeEEEcCCCchhhHHHHhCCCCCCC--CChHHhCceeEEEeecCCCCcCHHHHHHhhcc-CceEEEEecCCCCCCCC
Confidence 789988876543223233333322210 000000011111221 179999999984 67888876554433222
Q ss_pred cCCHHHHHHHHHHHHHh--CCEEEEeccccCCCCCCccccccccCCcccEEE--ecccCCCcc--ceeeEEeCHHHHhhc
Q 012368 263 SATKEFLQFLRDACDDA--GALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMT--LAKPLAGGL--PIGAALVTEKVASAI 336 (465)
Q Consensus 263 ~~~~~~l~~l~~l~~~~--g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t--~sK~lg~G~--~iG~v~~~~~i~~~~ 336 (465)
..+-+.++++.+++++. ++++.+|..|..|--. .+-..+..|++. +=|-.|||+ -.||+++++++++..
T Consensus 171 sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~-----~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~ 245 (403)
T PF06838_consen 171 SLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVET-----QEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERA 245 (403)
T ss_dssp ---HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSS-----S-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccc-----cCccccchhheeccceeCCCCCccCcCCEEechHHHHHHH
Confidence 34556777888777765 7899999999877322 233345578874 559999883 458999999999876
Q ss_pred c
Q 012368 337 N 337 (465)
Q Consensus 337 ~ 337 (465)
.
T Consensus 246 a 246 (403)
T PF06838_consen 246 A 246 (403)
T ss_dssp H
T ss_pred H
Confidence 3
No 381
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.38 E-value=8.8e-05 Score=70.70 Aligned_cols=195 Identities=14% Similarity=0.116 Sum_probs=116.1
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCC-cccEEEec--ccCCC-ccc
Q 012368 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGI-FPDIMTLA--KPLAG-GLP 322 (465)
Q Consensus 247 ~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~-~pdi~t~s--K~lg~-G~~ 322 (465)
.+-|...++....|+.++... .+.. +.++|+|-.-.-|+| ..++ +-|++.+| |-+|+ |
T Consensus 145 ~ayv~~~~NeTi~Gv~v~~~p------~~~~--~~~~v~D~SS~ilsr--------~iDvsk~dviyagaQKnlGpaG-- 206 (365)
T COG1932 145 DAYVHFCWNETISGVEVPELP------DIGS--DGLLVADASSAILSR--------PIDVSKYDVIYAGAQKNLGPAG-- 206 (365)
T ss_pred ccEEEEecCCcccceEccCCC------CCCC--CceEEEecccHHhcC--------CCChhHcceEEEehhhccCccc--
Confidence 444666677666777765321 1111 278888854332221 1122 35788887 99986 7
Q ss_pred eeeEEeCHHHHhhccCC------------CCcCCCCChHH-HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHcC
Q 012368 323 IGAALVTEKVASAINYG------------DHGSTFAGSPL-VCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARN 389 (465)
Q Consensus 323 iG~v~~~~~i~~~~~~~------------~~~~t~~~~~~-~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 389 (465)
++.++.++++++++... ..+++|+.+|. +......+++.+...+=++.+.++.+.-.+.|.+.+++.
T Consensus 207 ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s 286 (365)
T COG1932 207 LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKS 286 (365)
T ss_pred eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 88999999999887542 24567776654 444555667766554434444444444444445544444
Q ss_pred CCce---eeeccceE-EEEEec--CChHHHHHHHHHCCceEeecCC-CCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 390 PHVK---DVRGLGLI-IGIEFD--VSATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 390 ~~~~---~~~~~g~~-~~i~~~--~~~~~~~~~l~~~Gv~v~~~~~-~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
+... ....+..+ +.+.+. .-...|...+.++|+....+.. .+-+|+++--+++.++++.+++-++.+.++
T Consensus 287 ~fy~~~v~~~~RS~mnV~f~~~~~~ld~~fv~eae~~gl~~lkGhr~vgGmRasiynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 287 DFYRNLVAKANRSRMNVTFTLVDAELDKGFVAEAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred CccccccchhhccceeEEEEcCcHHHHHHHHHHHHHcCCceeccccCCCceeeeeecCCCHHHHHHHHHHHHHHHHh
Confidence 4111 11222332 223331 2345688888888887765543 233999998899999999999999887654
No 382
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.36 E-value=8.3e-05 Score=75.14 Aligned_cols=296 Identities=19% Similarity=0.236 Sum_probs=174.8
Q ss_pred HHHHHHHHHhhcCCCeEEec-CCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCC
Q 012368 142 QIELAKRLVACSFADRVFFS-NTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPF 220 (465)
Q Consensus 142 ~~~la~~l~~~~~~~~v~~~-~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 220 (465)
..+|.+.|++..|.|.+.|- |||.+.-..-++..|.|...+++. ...|....-+-||.......+.+-.... .
T Consensus 584 f~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~----hRnvClIPvSAHGTNPASA~Magmkvvp--V 657 (1001)
T KOG2040|consen 584 FTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEG----HRNVCLIPVSAHGTNPASAAMAGMKVVP--V 657 (1001)
T ss_pred HHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCC----cceeEEEeecccCCChhhHHhcCCEEEE--e
Confidence 56788999999997776654 789988888899999998766653 3456666677888876554443322111 0
Q ss_pred CCCCCCceEeeCCCHHHHHhhcC--CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecc----ccCCCC
Q 012368 221 EPVMPGVNFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEV----QCGLGR 294 (465)
Q Consensus 221 ~~~~~~~~~~~~~d~~~le~~l~--~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv----~~g~gr 294 (465)
.....+. -|+.+|+..-+ .++.+++++. .+++.|+.-+. ++.+.++.++||.-+..|-+ |-|+.+
T Consensus 658 ~~~~~G~-----id~~dLk~kaekh~~~Laa~MvT-YPST~GvfE~~---i~d~cd~iHehGGQVYlDGANMNAqVGlc~ 728 (1001)
T KOG2040|consen 658 GCDANGN-----IDMVDLKAKAEKHKDNLAALMVT-YPSTHGVFEEG---IDDICDIIHEHGGQVYLDGANMNAQVGLCR 728 (1001)
T ss_pred eccCCCC-----ccHHHHHHHHHHhhhhhheeEEe-ccccccccccc---HHHHHHHHHhcCCEEEecCCCccceecccC
Confidence 0000111 17788877766 3456666553 34556766443 88999999999999999986 556655
Q ss_pred CCcccc-ccccCCcccEEEecccCCC-ccceeeEEeCHHHHhhccCC---------C--CcCCCC----ChHHHHHHHHH
Q 012368 295 TGYLWA-HEHYGIFPDIMTLAKPLAG-GLPIGAALVTEKVASAINYG---------D--HGSTFA----GSPLVCNAAIA 357 (465)
Q Consensus 295 ~g~~~~-~~~~~~~pdi~t~sK~lg~-G~~iG~v~~~~~i~~~~~~~---------~--~~~t~~----~~~~~~~aa~a 357 (465)
.|..++ ..+.++. -||.=..|| |-.+|-+.+++.+...+-.- . -.++.+ ++........+
T Consensus 729 pGd~GaDV~HLNLH---KTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwa 805 (1001)
T KOG2040|consen 729 PGDIGADVCHLNLH---KTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWA 805 (1001)
T ss_pred Cccccccceeeccc---ceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHH
Confidence 553221 1111111 133333454 45556666666665544210 0 011222 23333444556
Q ss_pred HHHHhcCchHH---HHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEe--c---------CChHHHHHHHHHCCce
Q 012368 358 VLDKISNPAFL---ASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEF--D---------VSATPVVDACRDSGLL 423 (465)
Q Consensus 358 ~L~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~--~---------~~~~~~~~~l~~~Gv~ 423 (465)
.++.+...++. +-..-+..++.++|+. .++++ .....| ++.-+| + .++.+++++|.+.|+.
T Consensus 806 YikmMG~~GL~~as~~AiLNaNYMakRLe~---hYkil-~~~~~~-~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFH 880 (1001)
T KOG2040|consen 806 YIKMMGSGGLKDASKIAILNANYMAKRLES---HYKIL-FRGENG-LVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFH 880 (1001)
T ss_pred HHHHhcccccchhhHHHhhhhHHHHHHHhh---cccee-EecCCc-ceeeeeeeechhhccccCCcHHHHHHHHHhccCC
Confidence 67766544332 2233355667666655 33321 222223 333333 1 3567899999999987
Q ss_pred EeecCC--CCEEEEecCCCCcHHHHHHHHHHHHHHHHHh
Q 012368 424 VLTAGK--GNVVRLVPPLIISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 424 v~~~~~--~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~~ 460 (465)
...... .+.+.|-|.-.-+.+|+|++++++-.+-.++
T Consensus 881 aPTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIreEI 919 (1001)
T KOG2040|consen 881 APTMSWPVAGTLMIEPTESEDKAELDRFCDALISIREEI 919 (1001)
T ss_pred CCccccccCCceEeccCccccHHHHHHHHHHHHHHHHHH
Confidence 543221 3678888877778999999999987665443
No 383
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.35 E-value=4.3e-05 Score=74.16 Aligned_cols=216 Identities=14% Similarity=0.091 Sum_probs=113.1
Q ss_pred CHHHHHhhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc-cccc---cccCC
Q 012368 234 NIEATRKLIQ---PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY-LWAH---EHYGI 306 (465)
Q Consensus 234 d~~~le~~l~---~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~-~~~~---~~~~~ 306 (465)
|++++|++++ .+.+.+|+..+ ....+- -++.+++|.++|++||+..|+.-+|+ +- ... .-.. ...|.
T Consensus 140 d~~~ie~~i~~~G~~~iLcvlttt-scfapr---~~D~i~~IakiC~~~~IPhlvNnAYg-vQ-~~~~~~~i~~a~~~GR 213 (389)
T PF05889_consen 140 DLEAIEAKIEELGADNILCVLTTT-SCFAPR---LPDDIEEIAKICKEYDIPHLVNNAYG-VQ-SSKCMHLIQQAWRVGR 213 (389)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEEES-STTTTB-------HHHHHHHHHHHT--EEEEGTTT-TT--HHHHHHHHHHHHHST
T ss_pred cHHHHHHHHHHhCCCCeEEEEEec-CccCCC---CCccHHHHHHHHHHcCCceEEccchh-hh-HHHHHHHHHHHHhcCC
Confidence 5788888876 23344554443 333222 22459999999999999999999985 30 000 0000 01233
Q ss_pred c-ccEEEecccCCCccceeeEEe-CHHHHhhccCCCCcCCCCChHHHHHHHHHHHHHhcC---chHHHHHHHHHHHHHHH
Q 012368 307 F-PDIMTLAKPLAGGLPIGAALV-TEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISN---PAFLASVSKKGHYFKET 381 (465)
Q Consensus 307 ~-pdi~t~sK~lg~G~~iG~v~~-~~~i~~~~~~~~~~~t~~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~ 381 (465)
. .++-+..|-|--|..-+-+.+ .+..++.+...+-+-.+..+.+-. ..+|..+.. ..++....+...+++++
T Consensus 214 vda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~~YpGRas~sp~ld~---~itLl~LG~~g~~~ll~~r~~~f~~l~er 290 (389)
T PF05889_consen 214 VDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSKEYPGRASASPSLDL---FITLLSLGCTGYGALLKERKASFPYLKER 290 (389)
T ss_dssp CSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHHTSHSHBTSHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeeeecCCCEEecCCCcEEEecCHHHHHHHHHHhhhhhhcccchHH---HHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 2 223355565531111122222 456666665332222222222222 222222222 34566677778888999
Q ss_pred HHHHHHcCC-CceeeeccceEEEEEec-------CChHHHHHHHHHCCce----EeecCC----------CCEEEEecCC
Q 012368 382 LKQKLARNP-HVKDVRGLGLIIGIEFD-------VSATPVVDACRDSGLL----VLTAGK----------GNVVRLVPPL 439 (465)
Q Consensus 382 l~~~~~~~~-~~~~~~~~g~~~~i~~~-------~~~~~~~~~l~~~Gv~----v~~~~~----------~~~lRi~~~~ 439 (465)
|+++.++++ .+...+.....+.++++ .+...|...|..+||. +.+.+. -.++-+.-.+
T Consensus 291 l~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~Asai 370 (389)
T PF05889_consen 291 LKKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAI 370 (389)
T ss_dssp HHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-T
T ss_pred HHHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHh
Confidence 998887776 22333344455566663 1235677888888664 222211 1456666678
Q ss_pred CCcHHHHHHHHHHHHHHHH
Q 012368 440 IISEQELDQAVEILCKTLP 458 (465)
Q Consensus 440 ~~t~e~i~~~l~~l~~~l~ 458 (465)
.+++||+|.++++|+++++
T Consensus 371 G~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 371 GMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp T--HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhC
Confidence 8899999999999999874
No 384
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.34 E-value=3.5e-05 Score=71.31 Aligned_cols=276 Identities=14% Similarity=0.185 Sum_probs=145.6
Q ss_pred ecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHH
Q 012368 160 FSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATR 239 (465)
Q Consensus 160 ~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 239 (465)
-+-||+.|+..+-..+..+. .+..|.+..|++..+.......+-......+++.. +... -|++.+-
T Consensus 104 QslsGTGAl~~~A~Fl~~~~---------~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~--~~k~---~d~e~~L 169 (410)
T KOG1412|consen 104 QSLSGTGALRIAADFLATFY---------NKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDA--ENKC---VDLEGFL 169 (410)
T ss_pred eeccccchhhhhHHHHHHhc---------ccceeEecCCchhHHHHHHHHcCCceeeeeeeecC--CCce---ecHHHHH
Confidence 45578888887776555443 36678888888866554333222111111111111 1111 1666666
Q ss_pred hhcCCC-CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc----ccccccc---CCcccEE
Q 012368 240 KLIQPG-KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY----LWAHEHY---GIFPDIM 311 (465)
Q Consensus 240 ~~l~~~-~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~----~~~~~~~---~~~pdi~ 311 (465)
..|+.. ....+++-.-..|+..+-|++|.+.+|++..++.+.+-.+|-+|.|| -+|. .|+..++ |. +-++
T Consensus 170 sdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGf-ASGD~~~DawAiR~fV~~g~-e~fv 247 (410)
T KOG1412|consen 170 SDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGF-ASGDLDADAWAIRYFVEQGF-ELFV 247 (410)
T ss_pred HHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhccc-ccCCccccHHHHHHHHhcCC-eEEE
Confidence 666522 22333333222233336789999999999999999999999999999 3553 3444332 32 1222
Q ss_pred --EecccCCC-ccceeeEE--e-CHHHHhhccCC---CCcCCCCChHHHH--HHHHHHHHHhc-CchHH-------HHHH
Q 012368 312 --TLAKPLAG-GLPIGAAL--V-TEKVASAINYG---DHGSTFAGSPLVC--NAAIAVLDKIS-NPAFL-------ASVS 372 (465)
Q Consensus 312 --t~sK~lg~-G~~iG~v~--~-~~~i~~~~~~~---~~~~t~~~~~~~~--~aa~a~L~~~~-~~~~~-------~~~~ 372 (465)
+|+|-+|- +-|+|-+. + ++.++..+... ....+++ ||++. ......|..-+ .+++. .++.
T Consensus 248 ~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~S-NPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~ 326 (410)
T KOG1412|consen 248 CQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWS-NPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIK 326 (410)
T ss_pred EhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccC-CCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 68999985 77887542 2 34444433211 1223343 33333 33334443211 12222 2333
Q ss_pred HHHHHHHHHHHHHHHcCC-Ccee-eeccceEEEEEecCChHHHHHHHH-HCCceEeecCCCCEEEEecCCCCcHHHHHHH
Q 012368 373 KKGHYFKETLKQKLARNP-HVKD-VRGLGLIIGIEFDVSATPVVDACR-DSGLLVLTAGKGNVVRLVPPLIISEQELDQA 449 (465)
Q Consensus 373 ~~~~~l~~~l~~~~~~~~-~~~~-~~~~g~~~~i~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~ 449 (465)
+++..|++.|..+ +-| .... ++..|+| .+. .-...-.+.|. .+.|++.+.| ||+++ ..+...++..
T Consensus 327 ~MR~aLrd~L~aL--~TPGtWDHI~~QiGMF-SyT--GLtp~qV~~li~~h~vyLl~~G-----RInis-GLN~~NveyV 395 (410)
T KOG1412|consen 327 KMRTALRDHLVAL--KTPGTWDHITQQIGMF-SYT--GLTPAQVDHLIENHKVYLLSDG-----RINIS-GLNMKNVEYV 395 (410)
T ss_pred HHHHHHHHHHHhc--CCCCcHHHHHhhccce-eec--CCCHHHHHHHHHhceEEEecCC-----cEeee-ccccccHHHH
Confidence 4444444444433 222 1111 2333433 221 22233455565 5678887765 55554 3355678889
Q ss_pred HHHHHHHHHHhhhc
Q 012368 450 VEILCKTLPVLDSN 463 (465)
Q Consensus 450 l~~l~~~l~~~~~~ 463 (465)
.++|+++++.+..+
T Consensus 396 AkAIde~Vr~~~~~ 409 (410)
T KOG1412|consen 396 AKAIDETVRAIKSN 409 (410)
T ss_pred HHHHHHHHHhhccC
Confidence 99999988876543
No 385
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.15 E-value=0.0012 Score=64.79 Aligned_cols=328 Identities=16% Similarity=0.113 Sum_probs=163.6
Q ss_pred CHHHHHHHHHHHhhcccc-cCCCC--CHHHHHHHHHHHhhcC---CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 012368 116 DADWIKAVVDQANVLTHV-SNMYY--SIPQIELAKRLVACSF---ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEP 189 (465)
Q Consensus 116 ~p~v~~a~~~~~~~~~~~-~~~~~--~~~~~~la~~l~~~~~---~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~ 189 (465)
+|+..+-+.+...+.... ...++ .....+....++..++ .+--.-|.||||+...+.+..+.......+. .
T Consensus 93 ~~~~~~l~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I---~ 169 (491)
T KOG1383|consen 93 EPELDKLIMEAYNKFNPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGI---D 169 (491)
T ss_pred CcchhhHHHHHHhhcCccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCC---C
Confidence 556666666665543111 11122 2234556666666664 2223567889999888887665443321111 1
Q ss_pred CceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHH
Q 012368 190 ATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFL 269 (465)
Q Consensus 190 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l 269 (465)
+..|++... -|....-+...-+-.. .-.++.++...+ |+..+.+.++...+.+|..-|..+. |.+ +..
T Consensus 170 ~p~iv~~~~-v~~a~eK~a~yf~v~l---~~V~~~~~~~~~---D~~k~~~~i~eNti~lv~~~~~~p~-G~~----e~v 237 (491)
T KOG1383|consen 170 KPNIVTPQN-VHAAFEKAARYFEVEL---REVPLDEGDYRV---DPGKVVRMIDENTIMLVGSLPNFPT-GEI----EDV 237 (491)
T ss_pred CccccchHH-HHHHHHHHHhhEEEEE---EeeeccccceEe---cHHHHHHHhccceEEEEEEcCCCCc-cch----hhH
Confidence 233443322 1221111111000000 001222222111 7899999998654444444455554 444 348
Q ss_pred HHHHHHHHH-hCCEEEEeccccCCCCC-CccccccccCC----cccEEEecccCCC-ccceeeEEeC-HHH-Hhhcc--C
Q 012368 270 QFLRDACDD-AGALLVFDEVQCGLGRT-GYLWAHEHYGI----FPDIMTLAKPLAG-GLPIGAALVT-EKV-ASAIN--Y 338 (465)
Q Consensus 270 ~~l~~l~~~-~g~llI~DEv~~g~gr~-g~~~~~~~~~~----~pdi~t~sK~lg~-G~~iG~v~~~-~~i-~~~~~--~ 338 (465)
++|.++..+ +++.+.+|-.-.||--. +. .....++. ++-+.+-+--+|- --.+||++-+ +++ .+.+. .
T Consensus 238 e~l~~l~~e~w~ipiHvDa~~GgFi~p~~~-~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~ 316 (491)
T KOG1383|consen 238 EKLADLLLEIWDIPIHVDACLGGFINPAGY-LNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHT 316 (491)
T ss_pred HHHHHHHHHHhCCceeecccCccccccccc-cCccccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEec
Confidence 999999999 99999999988777322 21 11223333 1223333322321 1234666644 332 22221 0
Q ss_pred C-----CCcCCCCChH--HHHHHHHHHHHHhcCchHH---HHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEec-
Q 012368 339 G-----DHGSTFAGSP--LVCNAAIAVLDKISNPAFL---ASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFD- 407 (465)
Q Consensus 339 ~-----~~~~t~~~~~--~~~~aa~a~L~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~~- 407 (465)
. .-+.|.+++- .-.++..+++=.+..+++. +++.+....+++.++++ +.+ .+-+...+-.+-++
T Consensus 317 ~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i----~~i-~i~gkp~vs~~~~~s 391 (491)
T KOG1383|consen 317 DWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENI----KGI-KIVGKPLVSFILFGS 391 (491)
T ss_pred cccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhcc----ccc-eecCCCcEEEEEccC
Confidence 1 1223333332 2223344444444455544 44555667777777663 211 12233333333332
Q ss_pred --CChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHH-HHHHHHHHHHHHHHhhhcC
Q 012368 408 --VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQE-LDQAVEILCKTLPVLDSNS 464 (465)
Q Consensus 408 --~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~-i~~~l~~l~~~l~~~~~~~ 464 (465)
.+--++.+.|.+.|-.+..-..+..+.+++...+..++ .++++.-|++++.+++.++
T Consensus 392 ~~~~i~elsd~l~~~GW~lnalq~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~p 451 (491)
T KOG1383|consen 392 NDVNIFELSDLLRKKGWILNALQFPAAIHICVTRVHAREDVADRFVADIRKVVEELKSLP 451 (491)
T ss_pred CccchhhhhHHHHhcCcCccccCCCCceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhCC
Confidence 34457888899999877543323345555444455544 6889999999999988765
No 386
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.03 E-value=0.0056 Score=66.54 Aligned_cols=302 Identities=13% Similarity=0.127 Sum_probs=155.0
Q ss_pred cCCCCCHHHH-HHHHHHHhhcccccCCCCCHH-------HHHHHHHHHhhcCCC--eEEecCCHHHHHHHHHHHHHHHhh
Q 012368 111 ALGHGDADWI-KAVVDQANVLTHVSNMYYSIP-------QIELAKRLVACSFAD--RVFFSNTGTEANEAAIKFARKFQR 180 (465)
Q Consensus 111 ~lGh~~p~v~-~a~~~~~~~~~~~~~~~~~~~-------~~~la~~l~~~~~~~--~v~~~~sG~eA~~~al~~a~~~t~ 180 (465)
.++|--|.|+ +.+.+.-+-++. ++.|..+. .-++-..++++.|.+ ..-+..+++.+-+ |+.+++.+++
T Consensus 88 ~y~~~~P~vi~~~i~~~~~~yTa-YTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aE-A~~ma~~~~~ 165 (954)
T PRK12566 88 YHGTVTPTVILRNVLENPGWYTA-YTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAE-AMALAKRVAK 165 (954)
T ss_pred ccCCcCcHHHHHHHHhCchhhhc-CCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHH-HHHHHHHHhh
Confidence 4566445554 666553322222 23343222 234555677777755 4455556665555 4444444442
Q ss_pred hcCCCCCCCCceEEEEcCCcccCccccccccCCCCcCCCCCCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCC
Q 012368 181 HSNPDSKEPATEFVSFTNSFHGRTMGALALTSKEHYRSPFEPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGG 260 (465)
Q Consensus 181 ~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G 260 (465)
.++++|++.+ .-|..+..++..- ..+ .++..+. +++++.+.. ++++|++.-.+ .-|
T Consensus 166 -------~k~~~~~v~~-~~hP~~~~v~~t~--------~~~--~g~~i~~----~~~~~~~~~-~~~~v~vq~P~-~~G 221 (954)
T PRK12566 166 -------SKSNRFFVDE-HCHPQTLSVLRTR--------AEG--FGFELVV----DAVDNLAAH-AVFGALLQYPD-THG 221 (954)
T ss_pred -------cCCCEEEECC-CCCHHHHHHHHHh--------hhc--CCcEEEE----cchhhcCCC-CEEEEEEECCC-Cce
Confidence 0245555554 4455544333211 011 2222221 344555544 57887774322 345
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCCcccEEE-----ecccCC-CccceeeEEeCHHHHh
Q 012368 261 IYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMT-----LAKPLA-GGLPIGAALVTEKVAS 334 (465)
Q Consensus 261 ~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t-----~sK~lg-~G~~iG~v~~~~~i~~ 334 (465)
.+.. +++|.+++++.|+++|+- +..--.+..-.-. +...||++ ||=.++ ||--.|++.++++++.
T Consensus 222 ~i~d----~~~i~~~~h~~gal~~~~---~d~laL~ll~~Pg--e~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R 292 (954)
T PRK12566 222 EIRD----LRPLIDQLHGQQALACVA---ADLLSLLVLTPPG--ELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKR 292 (954)
T ss_pred EEcc----HHHHHHHHHHcCCEEEEE---eCHHHHhCCCChh--hcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHh
Confidence 5532 889999999999987732 1110011000111 22357763 333444 3455788888888776
Q ss_pred hccCCC----------------------------CcCCCCChHHHHHHHHHHH-HHhcCchH---HHHHHHHHHHHHHHH
Q 012368 335 AINYGD----------------------------HGSTFAGSPLVCNAAIAVL-DKISNPAF---LASVSKKGHYFKETL 382 (465)
Q Consensus 335 ~~~~~~----------------------------~~~t~~~~~~~~~aa~a~L-~~~~~~~~---~~~~~~~~~~l~~~l 382 (465)
.+-... -.+..+.|..-++.+.+.+ -.+..+++ .+++..+..++.+.|
T Consensus 293 ~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l 372 (954)
T PRK12566 293 AMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGL 372 (954)
T ss_pred hCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 653110 0122223322222222222 22233333 334555666666666
Q ss_pred HHHHHcCCCceeeeccceEEEEEe--cCChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHH
Q 012368 383 KQKLARNPHVKDVRGLGLIIGIEF--DVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILC 454 (465)
Q Consensus 383 ~~~~~~~~~~~~~~~~g~~~~i~~--~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~ 454 (465)
.+. .+.. .. ...|-.+.+ +..+.++.+...++|+.++..+. +.+.+++.-++|.+|++.++..+.
T Consensus 373 ~~~--g~~~---~~-~~fF~~~~v~~~~~~~~~~~~a~~~~~n~r~~~~-~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 373 EAK--GIKR---LN-RHFFDTLTLEVGGAQAAIIESAEAARINLRILGR-GRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred Hhc--CCcc---cc-CCccceEEEEccCCHHHHHHHHHHCCCeeEEeCC-CeEEEEeCCCCCHHHHHHHHHHhc
Confidence 552 2211 11 122322332 22567788899999999987654 678899988999999999999884
No 387
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=97.93 E-value=0.0004 Score=67.22 Aligned_cols=298 Identities=16% Similarity=0.133 Sum_probs=150.7
Q ss_pred HHHHHHHHHhhcC--C-CeEEecCCHHHHHHHHHHHHHHHhhhcCCC-C--CCCCceEEEEcCCcccCccccccccCCCC
Q 012368 142 QIELAKRLVACSF--A-DRVFFSNTGTEANEAAIKFARKFQRHSNPD-S--KEPATEFVSFTNSFHGRTMGALALTSKEH 215 (465)
Q Consensus 142 ~~~la~~l~~~~~--~-~~v~~~~sG~eA~~~al~~a~~~t~~~~~~-~--~~~~~~ii~~~~~yhg~~~~~~~~~~~~~ 215 (465)
..++-.++.+..| . .+-+|++||+-+|..++.+|+--.- ...+ . ..-++-|+..+..-|-+..-+...-+-.
T Consensus 143 E~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~-Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~g- 220 (510)
T KOG0629|consen 143 EEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNF-PEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLG- 220 (510)
T ss_pred hHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcC-chhhhhhhhcCCcEEEEecccchhhHHHHHHHhccC-
Confidence 3444455555555 2 3678999999999999999873110 0000 0 0012456665555554443322211100
Q ss_pred cCCCCCCCCCCceEeeCC-----CHHHHHhhcCC--CC-eEEEEEcccCCCC--CcccCCHHHHHHHHHHHHHhCCEEEE
Q 012368 216 YRSPFEPVMPGVNFVEYG-----NIEATRKLIQP--GK-TAAVFVEPIQGEG--GIYSATKEFLQFLRDACDDAGALLVF 285 (465)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~--~~-~a~vi~ep~~~~~--G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (465)
...+..++.+ ++++||+.|-. .+ -.-++++..-+++ |..-+ |..|+++|++|+.++++
T Consensus 221 --------td~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd----L~~iadiC~k~~lWmHv 288 (510)
T KOG0629|consen 221 --------TDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD----LNGIADICEKHKLWMHV 288 (510)
T ss_pred --------CceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc----HHHHHHHHHhcCEEEEe
Confidence 0112223322 57889888751 11 1123344433432 33333 99999999999999999
Q ss_pred eccccCCCCCCccccccccCC-cccEEEec--ccCCCccceeeEEeCHHH-HhhccC---------CC-CcCCC-CChHH
Q 012368 286 DEVQCGLGRTGYLWAHEHYGI-FPDIMTLA--KPLAGGLPIGAALVTEKV-ASAINY---------GD-HGSTF-AGSPL 350 (465)
Q Consensus 286 DEv~~g~gr~g~~~~~~~~~~-~pdi~t~s--K~lg~G~~iG~v~~~~~i-~~~~~~---------~~-~~~t~-~~~~~ 350 (465)
|.+..|---...-.-....|+ ..|.+|.+ |.+|.+++.++.+.+.+- ++.-.. .. +-.+| .+.-.
T Consensus 289 DAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~ 368 (510)
T KOG0629|consen 289 DAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKA 368 (510)
T ss_pred ecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccch
Confidence 998764101111001112244 35666654 888889999998887653 322211 10 00011 01111
Q ss_pred HHHH-------HHHHHHHhcC---chHHHHHHHHHHHHHHHHHHHHHcCCCceeeeccceEEEEEe---c----------
Q 012368 351 VCNA-------AIAVLDKISN---PAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEF---D---------- 407 (465)
Q Consensus 351 ~~~a-------a~a~L~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~i~~---~---------- 407 (465)
.+-. ..-.++.-.. +...++.-++.+++.++|++.-. +-.+.. +..-+.-+.+ +
T Consensus 369 iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~-~~~l~~--~~pe~~nv~fw~vp~~lR~~~~~~ 445 (510)
T KOG0629|consen 369 IQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREG-FEMLFE--LEPEHVNVCFWYVPPSLRGWQENP 445 (510)
T ss_pred hhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhccc-ceehhc--CCCceEEEeeccCchHhccCcccc
Confidence 1100 1111111111 34566777788888888876411 111111 1111111111 1
Q ss_pred -------CChHHHHHHHHHCCceEeec---C-CCCEEEEec-CCCCcHHHHHHHHHHHHHH
Q 012368 408 -------VSATPVVDACRDSGLLVLTA---G-KGNVVRLVP-PLIISEQELDQAVEILCKT 456 (465)
Q Consensus 408 -------~~~~~~~~~l~~~Gv~v~~~---~-~~~~lRi~~-~~~~t~e~i~~~l~~l~~~ 456 (465)
.-+..+...+.++|-....- + .++++|+-+ +.+.+.+|+|-+++.|.+.
T Consensus 446 e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 446 ERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERL 506 (510)
T ss_pred hhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence 01224566788888665432 2 246677643 3467899999999988764
No 388
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=97.76 E-value=0.00044 Score=65.11 Aligned_cols=213 Identities=18% Similarity=0.187 Sum_probs=108.9
Q ss_pred CceEEEeeeccEEEeCCCCEEEecccCcccccCCCCCHHHHHHHHHHHhh-ccc-ccCCCCCHHHHHHHHHHHhhcC---
Q 012368 80 APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANV-LTH-VSNMYYSIPQIELAKRLVACSF--- 154 (465)
Q Consensus 80 ~p~~~~~~~G~~~~d~dG~~ylD~~~~~~~~~lGh~~p~v~~a~~~~~~~-~~~-~~~~~~~~~~~~la~~l~~~~~--- 154 (465)
-|.-+-=|-|+|- |.+|+.|+ -|.|++|=.+.+.. ..- +......+....++.+|+ +|
T Consensus 51 n~~KiNLgvGaYR-dd~gKp~v--------------L~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa--~G~~s 113 (427)
T KOG1411|consen 51 NPKKINLGVGAYR-DDNGKPYV--------------LPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLA--LGDNS 113 (427)
T ss_pred Ccceeeeccccee-cCCCCeee--------------eHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHh--hcCCc
Confidence 4555555777754 44677664 15566665543331 110 111112222333333333 22
Q ss_pred ----CCeEEe--cCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCcccCccccccccCCC-CcCCCCCCCCCCc
Q 012368 155 ----ADRVFF--SNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHGRTMGALALTSKE-HYRSPFEPVMPGV 227 (465)
Q Consensus 155 ----~~~v~~--~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~ 227 (465)
..+|.. +-|||-|+-.+-.....|. +...|.+.+|+|-.+.......+-.. .|+ .+.+ ..
T Consensus 114 ~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~---------~~~~I~ip~PTWgNh~~if~~ag~~~~~yr-Yyd~---~t 180 (427)
T KOG1411|consen 114 PVIKEKRIVTVQTLSGTGALRVGAEFLARFY---------PSRDIYIPDPTWGNHKNIFKDAGLPVKFYR-YYDP---KT 180 (427)
T ss_pred hhhhccceeEEEeccCcchhhHHHHHHHhhc---------cccceeecCCcccccCccccccCcceeeee-eccc---cc
Confidence 234433 3568877766655554444 46679999999844332221111000 010 0011 10
Q ss_pred eEeeCCCHHHHHhhcC-CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc----cccc
Q 012368 228 NFVEYGNIEATRKLIQ-PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYL----WAHE 302 (465)
Q Consensus 228 ~~~~~~d~~~le~~l~-~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~----~~~~ 302 (465)
.-+ |.+.+-+-+. ...-..|++-.--+|+..+-|+.+.+++|+++.++.+.+-++|-+|.|| -.|.. ++..
T Consensus 181 ~gl---d~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGf-aSG~~d~DA~avR 256 (427)
T KOG1411|consen 181 RGL---DFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGF-ASGDLDKDAQAVR 256 (427)
T ss_pred ccc---chHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhccc-ccCCchhhHHHHH
Confidence 000 3333222222 1122344444433333336789999999999999999999999999999 45532 1111
Q ss_pred cc---CCcccE-EEecccCCC-ccceeeE
Q 012368 303 HY---GIFPDI-MTLAKPLAG-GLPIGAA 326 (465)
Q Consensus 303 ~~---~~~pdi-~t~sK~lg~-G~~iG~v 326 (465)
.+ |...-+ -+|+|-+|- |-|+|++
T Consensus 257 ~F~~~g~~~~laQSyAKNMGLYgERvGa~ 285 (427)
T KOG1411|consen 257 LFVEDGHEILLAQSYAKNMGLYGERVGAL 285 (427)
T ss_pred HHHHcCCceEeehhhhhhcchhhhcccee
Confidence 11 221111 268899985 7788876
No 389
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.47 E-value=0.011 Score=58.24 Aligned_cols=222 Identities=17% Similarity=0.151 Sum_probs=110.7
Q ss_pred CHHHHHhhcC----CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCccccccccCC-cc
Q 012368 234 NIEATRKLIQ----PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGI-FP 308 (465)
Q Consensus 234 d~~~le~~l~----~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~~~~~-~p 308 (465)
+.+.|+++|. ..-+..+++- ..|++|+. .-+.|.+|..+|+++|++|++|.+|.|-...-+.+-.-.-|+ ..
T Consensus 218 r~~~L~~AIe~D~arGlIPf~v~a-t~GTT~~c--a~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~a 294 (511)
T KOG0628|consen 218 RGDTLRKAIEEDIARGLIPFFVCA-TLGTTSSC--AFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYA 294 (511)
T ss_pred CHHHHHHHHHHHHhCCCccEEEEE-eecCcccc--ccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhh
Confidence 4678888886 2223444444 44555443 345699999999999999999999986311111100000122 12
Q ss_pred cEE--EecccCCCccceeeEE------------eCHHHHhhccCCC-CcCCCCChHHHH----HHHHHHHHHhcCchHHH
Q 012368 309 DIM--TLAKPLAGGLPIGAAL------------VTEKVASAINYGD-HGSTFAGSPLVC----NAAIAVLDKISNPAFLA 369 (465)
Q Consensus 309 di~--t~sK~lg~G~~iG~v~------------~~~~i~~~~~~~~-~~~t~~~~~~~~----~aa~a~L~~~~~~~~~~ 369 (465)
|-. ..+|++---+-.+.+. +.+...+.-.... .-.-...=|++- .-..-.++.+.-+++.+
T Consensus 295 DSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~ 374 (511)
T KOG0628|consen 295 DSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQN 374 (511)
T ss_pred ccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHH
Confidence 222 1245442212222222 2222211111000 000111112221 12223445554566666
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcee--eeccceEEEEEec---CChHHHHHHHHHCC-ceEeecCC--CCEEEEecCCC-
Q 012368 370 SVSKKGHYFKETLKQKLARNPHVKD--VRGLGLIIGIEFD---VSATPVVDACRDSG-LLVLTAGK--GNVVRLVPPLI- 440 (465)
Q Consensus 370 ~~~~~~~~l~~~l~~~~~~~~~~~~--~~~~g~~~~i~~~---~~~~~~~~~l~~~G-v~v~~~~~--~~~lRi~~~~~- 440 (465)
++++.. +|.+.++++..+-+.+.. .+-.|+. .+.+. ...+++.+++...| |.+.+... .-++|+.+...
T Consensus 375 ~iR~h~-~La~~fe~lv~~d~~FE~~~~~~lgLv-cFRlk~~N~~ne~Ll~~in~~g~i~l~~~~l~gk~vlRf~V~s~~ 452 (511)
T KOG0628|consen 375 YIREHV-RLAKEFETLVRADPRFEIVNKRILGLV-CFRLKGDNEINEALLNRLNSSGRIHLVPASLHGKFVLRFAVCSPL 452 (511)
T ss_pred HHHHHH-HHHHHHHHHhhcCCcceeeccccccee-EEeecCCcHHHHHHHHHHHhcCcEEEEEeeecceEEEEEEecCCC
Confidence 555543 445566666555553322 2333433 33332 22355666666554 66666532 24688877543
Q ss_pred CcHHHHHHHHHHHHHHHHHh
Q 012368 441 ISEQELDQAVEILCKTLPVL 460 (465)
Q Consensus 441 ~t~e~i~~~l~~l~~~l~~~ 460 (465)
++++++++..+.|.+....+
T Consensus 453 t~~~di~~a~~~I~~~a~~l 472 (511)
T KOG0628|consen 453 TNESDIDEAWKIIFEAADEL 472 (511)
T ss_pred CcHHHHHHHHHHHHHHHHHH
Confidence 47789999999998877664
No 390
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.43 E-value=0.011 Score=56.44 Aligned_cols=262 Identities=18% Similarity=0.257 Sum_probs=128.5
Q ss_pred cCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCc-----ccCccccccccCCCCcCCCC-CCCCCCceEeeCCC
Q 012368 161 SNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSF-----HGRTMGALALTSKEHYRSPF-EPVMPGVNFVEYGN 234 (465)
Q Consensus 161 ~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~y-----hg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d 234 (465)
.-||+-||..+-.+... |.++|.-.+--- ||+.......+....|-..+ ....+....+ |
T Consensus 112 p~SGSPANfavYtall~-----------Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~I---D 177 (477)
T KOG2467|consen 112 PYSGSPANFAVYTALLK-----------PHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYI---D 177 (477)
T ss_pred cCCCCchhhHHHhhhcC-----------CCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCce---e
Confidence 45799999887776652 677777654322 33332222222222222111 0112223334 4
Q ss_pred HHHHHhhcCCCCeEEEEEcccCCCCCcccCCHH-HHHHHHHHHHHhCCEEEEeccc-cCCCCCCc-cccccccCCcccEE
Q 012368 235 IEATRKLIQPGKTAAVFVEPIQGEGGIYSATKE-FLQFLRDACDDAGALLVFDEVQ-CGLGRTGY-LWAHEHYGIFPDIM 311 (465)
Q Consensus 235 ~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~-~l~~l~~l~~~~g~llI~DEv~-~g~gr~g~-~~~~~~~~~~pdi~ 311 (465)
.+.||+.-..-++.++|+-. ..+++. ...+++++|++.|++|++|=+| +|+.-.|. ...+++ .||+
T Consensus 178 YD~Le~~A~~frPk~iiaG~-------SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey----~DiV 246 (477)
T KOG2467|consen 178 YDKLEKTATLFRPKLIIAGT-------SAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY----CDIV 246 (477)
T ss_pred hHHHHHHHHhcCCcEEEecc-------ccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccc----ccee
Confidence 45555443322345666532 122222 2789999999999999999885 34432332 222333 4677
Q ss_pred Ee--cccCCCccceeeEEeCHHHHh---------------hc----cCCCCcCCCCChHHHHHHHHHHHHHhcCch---H
Q 012368 312 TL--AKPLAGGLPIGAALVTEKVAS---------------AI----NYGDHGSTFAGSPLVCNAAIAVLDKISNPA---F 367 (465)
Q Consensus 312 t~--sK~lg~G~~iG~v~~~~~i~~---------------~~----~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~---~ 367 (465)
|- -|+|-| -|.|.+.-++.+.. .+ -|+.+++..+-. .++...+|.....++ +
T Consensus 247 TTTTHKsLRG-PRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNht---IaalAvALkQa~tpefk~Y 322 (477)
T KOG2467|consen 247 TTTTHKSLRG-PRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHT---IAALAVALKQAMTPEFKEY 322 (477)
T ss_pred eccccccccC-CcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcch---HHHHHHHHHhhCCHHHHHH
Confidence 54 488864 35455554442211 11 122334444332 233333454444444 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCceeeecc-ceEEEEEec---CCh---HHHHHHHHHCCceE----eecC----CCCE
Q 012368 368 LASVSKKGHYFKETLKQKLARNPHVKDVRGL-GLIIGIEFD---VSA---TPVVDACRDSGLLV----LTAG----KGNV 432 (465)
Q Consensus 368 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-g~~~~i~~~---~~~---~~~~~~l~~~Gv~v----~~~~----~~~~ 432 (465)
.+++.++.+.|.+.|.+. .+.++. .|. ..++.+++. .+. +.+++.+ +|.+ .|+. .++-
T Consensus 323 q~qV~~Nakala~~l~~~--Gy~lvt--gGTDnHlvLvDLr~~G~dGarvE~vle~~---~I~~NKNtvpGD~Sal~PgG 395 (477)
T KOG2467|consen 323 QKQVLKNAKALASALISR--GYKLVT--GGTDNHLVLVDLRPKGVDGARVEKVLELC---HIALNKNTVPGDKSALSPGG 395 (477)
T ss_pred HHHHHHHHHHHHHHHHHc--CceEec--CCccceEEEEeccccCCchHHHHHHHHHh---hhhhcCCcCCCCccccCCCc
Confidence 556666777777666554 222221 111 234455552 222 3333332 2222 1221 1244
Q ss_pred EEEecCCC----CcHHHHHHHHHHHHHHHH
Q 012368 433 VRLVPPLI----ISEQELDQAVEILCKTLP 458 (465)
Q Consensus 433 lRi~~~~~----~t~e~i~~~l~~l~~~l~ 458 (465)
+|+-.|.. ..++|.++..+-|.++++
T Consensus 396 iRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 396 IRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred eeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 88865533 356888888887777654
No 391
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.14 E-value=0.0021 Score=55.14 Aligned_cols=55 Identities=20% Similarity=0.181 Sum_probs=45.4
Q ss_pred CCCHHHHHHHHHHHhhcC------CCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCccc
Q 012368 137 YYSIPQIELAKRLVACSF------ADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSFHG 202 (465)
Q Consensus 137 ~~~~~~~~la~~l~~~~~------~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~yhg 202 (465)
+..+.++++++++.+.++ +++|++|+|+++|++.+++.+. +++|.|++.+|.|+|
T Consensus 93 G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~-----------dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 93 GLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIA-----------DPGDAFLVPTPYYAA 153 (153)
T ss_pred CcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHc-----------CCCCEEEEeCCCCCC
Confidence 344558888888877644 5799999999999999988776 279999999999975
No 392
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=97.06 E-value=0.014 Score=54.22 Aligned_cols=201 Identities=15% Similarity=0.151 Sum_probs=116.6
Q ss_pred CCHHHHHHHHHHH-hh--cccccCCCCC-HHHHHHHHHHHhhcCCCe----EEecCCHHHHHHHHHHHHHHHhhhcCCCC
Q 012368 115 GDADWIKAVVDQA-NV--LTHVSNMYYS-IPQIELAKRLVACSFADR----VFFSNTGTEANEAAIKFARKFQRHSNPDS 186 (465)
Q Consensus 115 ~~p~v~~a~~~~~-~~--~~~~~~~~~~-~~~~~la~~l~~~~~~~~----v~~~~sG~eA~~~al~~a~~~t~~~~~~~ 186 (465)
|-.+|.+|.++.- .. ....+.++.+ ..+.-|.+-.++.++.|. .-| -||+.|+..|+--.+.
T Consensus 36 Nq~kVL~AF~~~rvs~~hf~~stGYGydD~GRdtLe~vyA~vf~aE~a~VRpq~-isGTHAI~~aLfg~LR--------- 105 (416)
T COG4100 36 NQKKVLEAFRHHRVSESHFTGSTGYGYDDLGRDTLERVYAQVFGAEAALVRPQI-ISGTHAIACALFGILR--------- 105 (416)
T ss_pred HHHHHHHHHHhcccchhccCCCCCCCccccchhHHHHHHHHHhccccceeeeee-ecchhHHHHHHHhccC---------
Confidence 3355666666532 11 1111222233 337888888899888442 223 3699999998876552
Q ss_pred CCCCceEEEEcCCcccCccccccccCCC-----CcCCCC--CCCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCC
Q 012368 187 KEPATEFVSFTNSFHGRTMGALALTSKE-----HYRSPF--EPVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEG 259 (465)
Q Consensus 187 ~~~~~~ii~~~~~yhg~~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~ 259 (465)
|+|..+...+.=.-.....+.+.+.. .+...+ .++.++... |.+.++..+++ ++++|.+--.-+-.
T Consensus 106 --pgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~~gki----D~~~v~~~i~~-~tkli~IQRS~GY~ 178 (416)
T COG4100 106 --PGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTADGKI----DIQAVKTAISD-RTKLIGIQRSKGYA 178 (416)
T ss_pred --CCCeEEEecCCcchhHHHHhccCCCCcccHHHhCcceeecccccCCcc----cHHHHHHhcCc-cceEEEEEeccCcC
Confidence 78888887654322222222222110 011111 122222221 88999999975 56777665543322
Q ss_pred CcccCCHHHHHHHHHHHHHh--CCEEEEeccccCCCCCCccccccccCCcccEE--EecccCCCcc--ceeeEEeCHHHH
Q 012368 260 GIYSATKEFLQFLRDACDDA--GALLVFDEVQCGLGRTGYLWAHEHYGIFPDIM--TLAKPLAGGL--PIGAALVTEKVA 333 (465)
Q Consensus 260 G~~~~~~~~l~~l~~l~~~~--g~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~--t~sK~lg~G~--~iG~v~~~~~i~ 333 (465)
---..+-+.++++.++.++- ++++.+|..|..|--. .+...+..|++ ++=|--|||+ -.|++.++++++
T Consensus 179 ~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~-----~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~v 253 (416)
T COG4100 179 WRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEE-----KEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELV 253 (416)
T ss_pred CCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhc-----cCccccchhhhccceeeCCCCceeeccceeechHHHH
Confidence 11112346678888888775 6888999998777322 23334556777 4668888874 568999999998
Q ss_pred hhcc
Q 012368 334 SAIN 337 (465)
Q Consensus 334 ~~~~ 337 (465)
+...
T Consensus 254 e~~~ 257 (416)
T COG4100 254 EAAA 257 (416)
T ss_pred Hhhc
Confidence 8654
No 393
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=95.02 E-value=0.065 Score=48.99 Aligned_cols=54 Identities=9% Similarity=0.162 Sum_probs=36.0
Q ss_pred CHHHHHhhcCCCCeEEEEEcccCCCCCc-ccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 012368 234 NIEATRKLIQPGKTAAVFVEPIQGEGGI-YSATKEFLQFLRDACDDAGALLVFDEVQ 289 (465)
Q Consensus 234 d~~~le~~l~~~~~a~vi~ep~~~~~G~-~~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (465)
|++++++.++....-+|++-. +++.+ .+-+++-+++|..+|..|++.-|+..+|
T Consensus 142 dleav~~~iee~g~dcilci~--sttscfapr~pd~leaiaaica~~diphivnnay 196 (432)
T KOG3843|consen 142 DLEAVEAIIEELGEDCILCIH--STTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAY 196 (432)
T ss_pred hHHHHHHHHHHhCCceEEEEe--ecccccCCCCCchHHHHHHHHHccCchhhhcccc
Confidence 789999988722222222211 11111 2345677999999999999999999887
No 394
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=93.43 E-value=12 Score=39.34 Aligned_cols=49 Identities=12% Similarity=0.182 Sum_probs=38.5
Q ss_pred EecCChHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHH
Q 012368 405 EFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILC 454 (465)
Q Consensus 405 ~~~~~~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~ 454 (465)
.+....+++..+..++++-++.... +.+-+++--+.+++|++.++..+.
T Consensus 430 ~~~~s~~~~l~rA~~~~iNlr~~ed-~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 430 RCGCSAEEVLDRAAKRQINLRLVED-GTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred EecCcHHHHHHHHHhhcCceEEeec-CceEEeecccccHHHHHHHHHHHc
Confidence 3344678888888888888876554 567788888889999999998875
No 395
>smart00642 Aamy Alpha-amylase domain.
Probab=68.65 E-value=15 Score=31.80 Aligned_cols=59 Identities=19% Similarity=0.166 Sum_probs=40.1
Q ss_pred CHHHHHhhcC---CCCeEEEEEcccCCCCCc-----------------ccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 234 NIEATRKLIQ---PGKTAAVFVEPIQGEGGI-----------------YSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 234 d~~~le~~l~---~~~~a~vi~ep~~~~~G~-----------------~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
|++.+.+.+. .-.+.+|.+.|++..... ..-+.+.++++++.|+++|+-+|.|=|....
T Consensus 17 ~~~gi~~~l~yl~~lG~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~NH~ 95 (166)
T smart00642 17 DLQGIIEKLDYLKDLGVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVINHT 95 (166)
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 4555544432 335778888887544320 1124477999999999999999999986643
No 396
>PRK05782 bifunctional sirohydrochlorin cobalt chelatase/precorrin-8X methylmutase; Validated
Probab=67.80 E-value=82 Score=30.78 Aligned_cols=50 Identities=12% Similarity=0.099 Sum_probs=29.6
Q ss_pred CCcccEEEecccCCCccceeeEEeC--HH-HHhhccC-CCCcCCCCChHHHHHHHHHHHHH
Q 012368 305 GIFPDIMTLAKPLAGGLPIGAALVT--EK-VASAINY-GDHGSTFAGSPLVCNAAIAVLDK 361 (465)
Q Consensus 305 ~~~pdi~t~sK~lg~G~~iG~v~~~--~~-i~~~~~~-~~~~~t~~~~~~~~~aa~a~L~~ 361 (465)
++.|.+++ |.|+|+|-+. ++ +++.--| ....++-+|++++.++..+.++.
T Consensus 279 ~~~palvi-------g~PVGFV~a~esKe~L~~~~vP~I~~~G~kGGs~vAaa~vNal~~~ 332 (335)
T PRK05782 279 GVDIPFIV-------ATPPGFTNAKEVKEALIESGIPSVVLRGTYGGSGIAVAIINELIKM 332 (335)
T ss_pred CCCCcEEE-------EeCCcccCHHHHHHHHHhCCCCEEEEecCCCcHHHHHHHHHHHHHH
Confidence 55676655 7899998653 22 2221111 12346677888888777776653
No 397
>KOG2433 consensus Uncharacterized conserved protein [Function unknown]
Probab=67.58 E-value=19 Score=35.28 Aligned_cols=89 Identities=20% Similarity=0.299 Sum_probs=52.4
Q ss_pred CCHHHHHHHHHHHhhcccc--cCCCCCHHHHHHHHHHHhhcC-CCeEEecCCHHHHHHHHHHHHHHHhhhcCC-----C-
Q 012368 115 GDADWIKAVVDQANVLTHV--SNMYYSIPQIELAKRLVACSF-ADRVFFSNTGTEANEAAIKFARKFQRHSNP-----D- 185 (465)
Q Consensus 115 ~~p~v~~a~~~~~~~~~~~--~~~~~~~~~~~la~~l~~~~~-~~~v~~~~sG~eA~~~al~~a~~~t~~~~~-----~- 185 (465)
.|.+|.+|+.+.-++.... +..+.- ..++.--|.++.+ ..+|++++||+|-.+.+-.+|+.|-....| .
T Consensus 434 tHrEiQqaLvdi~DKpA~FVGSrQWIG--StEis~vLn~ll~~~skil~v~sGaEva~~~rELA~HFqt~GTPVMIGGgv 511 (577)
T KOG2433|consen 434 THREIQQALVDIQDKPAKFVGSRQWIG--STEISFVLNELLKLESKILAVNSGAEVAERVRELARHFQTSGTPVMIGGGV 511 (577)
T ss_pred cHHHHHHHHHhccCcccceecccceec--chhHHHHHHHHhccceEEEEeccccHHHHHHHHHHHHhhccCCcEEEccce
Confidence 4557788877765553221 111111 1233334555566 568999999999999998899877421110 0
Q ss_pred -----------CCCCCceEEEEcCCcccCcc
Q 012368 186 -----------SKEPATEFVSFTNSFHGRTM 205 (465)
Q Consensus 186 -----------~~~~~~~ii~~~~~yhg~~~ 205 (465)
+.++..+.++.+|.|-|..+
T Consensus 512 LAHTIlGVd~n~~TGq~KFLILDPHYTGaeD 542 (577)
T KOG2433|consen 512 LAHTILGVDFNDTTGQTKFLILDPHYTGAED 542 (577)
T ss_pred eeeeEeeeeeecccCceEEEEeCCCcCChhh
Confidence 11345567777777766654
No 398
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=61.12 E-value=1.6e+02 Score=28.29 Aligned_cols=42 Identities=17% Similarity=0.158 Sum_probs=30.0
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 249 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
-|.+.....-+|.-.|.+|.++.+..+++..|+ +.|=||+|-
T Consensus 244 ~v~~~~dy~~~~Yg~p~~e~~e~i~~~~~~eGi--llDpVYtgK 285 (323)
T COG2515 244 DVLLSDDYHHPGYGKPNEEDIEAIKLLARLEGI--LLDPVYTGK 285 (323)
T ss_pred eEEEEecccCCccCCcCHHHHHHHHHHHHhhCc--ccccccchH
Confidence 333344444444456789999999999999986 569999873
No 399
>COG0041 PurE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]
Probab=56.48 E-value=1.3e+02 Score=25.71 Aligned_cols=21 Identities=14% Similarity=0.262 Sum_probs=17.9
Q ss_pred CHHHHHHHHHHHHHhCCEEEE
Q 012368 265 TKEFLQFLRDACDDAGALLVF 285 (465)
Q Consensus 265 ~~~~l~~l~~l~~~~g~llI~ 285 (465)
+++.+.+..+-+++.|+-+|+
T Consensus 42 TPe~m~~ya~~a~~~g~~viI 62 (162)
T COG0041 42 TPEKMFEYAEEAEERGVKVII 62 (162)
T ss_pred CHHHHHHHHHHHHHCCCeEEE
Confidence 678899999999999996665
No 400
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=54.75 E-value=37 Score=32.70 Aligned_cols=36 Identities=17% Similarity=0.147 Sum_probs=28.1
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecc
Q 012368 249 AVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEV 288 (465)
Q Consensus 249 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 288 (465)
+|++...-|.+ + +.+++.+|.++|++.|+.+++|-.
T Consensus 132 ~VvlsGSlP~g--~--~~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 132 IVVLSGSLPPG--V--PPDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred EEEEeCCCCCC--C--CHHHHHHHHHHHHhcCCeEEEECC
Confidence 45665555543 2 679999999999999999999953
No 401
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=53.73 E-value=23 Score=31.18 Aligned_cols=52 Identities=13% Similarity=0.259 Sum_probs=30.8
Q ss_pred CHHHHHhhcCC-CCeEEEEEcccCCCCCcccCC----HHHHHHHHHHHHHhCCEEEE
Q 012368 234 NIEATRKLIQP-GKTAAVFVEPIQGEGGIYSAT----KEFLQFLRDACDDAGALLVF 285 (465)
Q Consensus 234 d~~~le~~l~~-~~~a~vi~ep~~~~~G~~~~~----~~~l~~l~~l~~~~g~llI~ 285 (465)
+++.+++.+.. .++.+|+++|...-.+.-..+ ..+++.+.++|+++|+.+|+
T Consensus 128 ~~~~l~~~~~~~~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~ 184 (193)
T PF13481_consen 128 DLEELEAALKELYGPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVIL 184 (193)
T ss_dssp HHHHHHHHHTT----SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEEE
T ss_pred HHHHHHHHHhhcCCCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 45777887775 578899999975432211111 36899999999999987664
No 402
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=48.74 E-value=31 Score=31.21 Aligned_cols=90 Identities=22% Similarity=0.259 Sum_probs=50.5
Q ss_pred HHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc---CCCCCCccccccccCCc-ccE
Q 012368 235 IEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC---GLGRTGYLWAHEHYGIF-PDI 310 (465)
Q Consensus 235 ~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~---g~gr~g~~~~~~~~~~~-pdi 310 (465)
++.+|++++..-....+-+-....- . ..+..++++++|++|++.||+++=.. ..+-.|- |.|-. ..+
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~---~-~~~~a~~~~~lc~~~~v~liINd~~dlA~~~~AdGV-----HlGq~D~~~ 94 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDE---E-YLALAEKLRALCQKYGVPLIINDRVDLALAVGADGV-----HLGQDDMPL 94 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChH---H-HHHHHHHHHHHHHHhCCeEEecCcHHHHHhCCCCEE-----EcCCcccch
Confidence 7889999986544455555433221 1 14557899999999999888776321 0111111 11111 111
Q ss_pred EEecccCCCccceeeEEeCHHHH
Q 012368 311 MTLAKPLAGGLPIGAALVTEKVA 333 (465)
Q Consensus 311 ~t~sK~lg~G~~iG~v~~~~~i~ 333 (465)
....|.++.++.+|+-+-+.+-.
T Consensus 95 ~~ar~~~~~~~iIG~S~h~~eea 117 (211)
T COG0352 95 AEARELLGPGLIIGLSTHDLEEA 117 (211)
T ss_pred HHHHHhcCCCCEEEeecCCHHHH
Confidence 22345666677888776654433
No 403
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=48.09 E-value=2.5e+02 Score=26.72 Aligned_cols=144 Identities=11% Similarity=0.042 Sum_probs=72.9
Q ss_pred ccCCCccceeeEEeCHHHHhhccCC-----------CCcCCCCChH-HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 012368 315 KPLAGGLPIGAALVTEKVASAINYG-----------DHGSTFAGSP-LVCNAAIAVLDKISNPAFLASVSKKGHYFKETL 382 (465)
Q Consensus 315 K~lg~G~~iG~v~~~~~i~~~~~~~-----------~~~~t~~~~~-~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~l 382 (465)
|.+|. ..+-.++.+++++....+. ...+-|+..| ++..+.--.++.+.+.+=++.+.+....--+.|
T Consensus 205 KN~G~-aG~Tvvivr~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~Kskll 283 (370)
T KOG2790|consen 205 KNVGP-AGVTVVIVRKDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLL 283 (370)
T ss_pred cccCc-cccEEEEEehhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 55542 2344566788876544321 1223344333 344444445665544333333444333333444
Q ss_pred HHHHHcCC----CceeeeccceEE-EEEe--cCChHHHHHHHHHCCceEeecCC-CCEEEEecCCCCcHHHHHHHHHHHH
Q 012368 383 KQKLARNP----HVKDVRGLGLII-GIEF--DVSATPVVDACRDSGLLVLTAGK-GNVVRLVPPLIISEQELDQAVEILC 454 (465)
Q Consensus 383 ~~~~~~~~----~~~~~~~~g~~~-~i~~--~~~~~~~~~~l~~~Gv~v~~~~~-~~~lRi~~~~~~t~e~i~~~l~~l~ 454 (465)
.+.+.+.. +......+..|. .+.+ +.-..+|.+...+++..-..++. -+-+|-++=-+++-++.+.+++-++
T Consensus 284 Yd~iD~s~gfy~cpVe~~~RS~MNV~Fri~~d~Le~eFLkeA~~~~mv~LKGhRSVGGiRASlYNAisv~~~q~L~~~m~ 363 (370)
T KOG2790|consen 284 YDAIDNSNGFYRCPVEPSVRSRMNVPFRIEKDELEAEFLKEAAKEHMVQLKGHRSVGGIRASLYNAISVEEVQKLAAFMK 363 (370)
T ss_pred HHHHHhcCCeEEcccchhhhhhcccceeecchHHHHHHHHHHHHhhhhccccccccccchhhhhccccHHHHHHHHHHHH
Confidence 45444442 122222223221 2233 23345677777777765443332 1237777766789999999888888
Q ss_pred HHHHH
Q 012368 455 KTLPV 459 (465)
Q Consensus 455 ~~l~~ 459 (465)
++.+.
T Consensus 364 ~F~k~ 368 (370)
T KOG2790|consen 364 EFQKK 368 (370)
T ss_pred HHHHh
Confidence 77653
No 404
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=45.94 E-value=25 Score=37.25 Aligned_cols=33 Identities=30% Similarity=0.294 Sum_probs=29.2
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc
Q 012368 265 TKEFLQFLRDACDDAGALLVFDEVQCGLGRTGY 297 (465)
Q Consensus 265 ~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~ 297 (465)
+++.++++++.|+++|+-||+|=|+..|+..|.
T Consensus 212 tPedfk~fVD~aH~~GIgViLD~V~~HF~~d~~ 244 (628)
T COG0296 212 TPEDFKALVDAAHQAGIGVILDWVPNHFPPDGN 244 (628)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEecCCcCCCCcc
Confidence 568899999999999999999999998876553
No 405
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=45.71 E-value=30 Score=30.80 Aligned_cols=37 Identities=22% Similarity=0.279 Sum_probs=28.9
Q ss_pred CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 012368 244 PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF 285 (465)
Q Consensus 244 ~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (465)
+-..++||||-.+..|+ +.. .+++.+++++||+.+|.
T Consensus 154 Gl~Pa~VicEi~~~dG~-mar----~~~~~~fa~~h~l~~it 190 (203)
T COG0108 154 GLKPAGVICEIMNDDGT-MAR----LPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCCCcEEEEEEeCCCcc-ccC----hHHHHHHHHHcCCcEEE
Confidence 34679999999887554 333 67889999999998874
No 406
>PLN02672 methionine S-methyltransferase
Probab=41.50 E-value=89 Score=35.70 Aligned_cols=49 Identities=22% Similarity=0.179 Sum_probs=32.0
Q ss_pred HHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecc
Q 012368 236 EATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEV 288 (465)
Q Consensus 236 ~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 288 (465)
+.+.+++++-++.+|++.--+.+. . +..-++.|.+.+++-|+.|+.|+.
T Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 517 DLVIELIKKLKPQVVVTGMADFEM---R-TSTAFEHLLNVTAEIGARLFLDIS 565 (1082)
T ss_pred hHHHHHHHhCCCeEEEEeccchhh---h-hHHHHHHHHHHHHhhCcEEEEehh
Confidence 345555553345566554444332 1 334478899999999999999986
No 407
>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.
Probab=39.95 E-value=1.3e+02 Score=27.04 Aligned_cols=42 Identities=19% Similarity=0.239 Sum_probs=26.4
Q ss_pred CCCeEEEEEcccCCCCCc-ccC----------CHHHHHHHHHHHHHhCCEEEE
Q 012368 244 PGKTAAVFVEPIQGEGGI-YSA----------TKEFLQFLRDACDDAGALLVF 285 (465)
Q Consensus 244 ~~~~a~vi~ep~~~~~G~-~~~----------~~~~l~~l~~l~~~~g~llI~ 285 (465)
...+.+|++|++..--.. ... -.+++..|..+|+++++.+|+
T Consensus 112 ~~~~~lvVIDsis~l~~~~~~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vi~ 164 (226)
T cd01393 112 SGRVDLVVVDSVAALFRKEFIGRGMLAERARLLSQALRKLLRLADKFNVAVVF 164 (226)
T ss_pred cCCeeEEEEcCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEE
Confidence 447889999997542100 000 123456789999999997653
No 408
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=39.35 E-value=43 Score=33.34 Aligned_cols=58 Identities=19% Similarity=0.165 Sum_probs=38.9
Q ss_pred eEeeCCCHHHHHhhcCCCCeEEEEEcccCCC--------CCcccCCHHHHHHHHHHHHHhCCEEEE
Q 012368 228 NFVEYGNIEATRKLIQPGKTAAVFVEPIQGE--------GGIYSATKEFLQFLRDACDDAGALLVF 285 (465)
Q Consensus 228 ~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~--------~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (465)
...+..+++.+.+.+...++..|++|+++.- .|...--.+.+..|.++++++|+.+|+
T Consensus 140 ~l~~e~~le~I~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 140 YLLAETNLEDILASIEELKPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred EEEccCcHHHHHHHHHhcCCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 3344457888888887667889999997542 121111235567789999999986643
No 409
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=39.14 E-value=83 Score=33.13 Aligned_cols=51 Identities=24% Similarity=0.255 Sum_probs=36.0
Q ss_pred CeEEEEEcccCCCCCc---------------ccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCC
Q 012368 246 KTAAVFVEPIQGEGGI---------------YSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTG 296 (465)
Q Consensus 246 ~~a~vi~ep~~~~~G~---------------~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g 296 (465)
.+.+|.+.|++...+. ..-+.+.++++++.|+++|+-||.|=|+..++..+
T Consensus 124 Gv~~i~L~Pi~~~~~~~~~GY~~~~~~~~~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~NH~~~~~ 189 (542)
T TIGR02402 124 GITAIELMPVAQFPGTRGWGYDGVLPYAPHNAYGGPDDLKALVDAAHGLGLGVILDVVYNHFGPEG 189 (542)
T ss_pred CCCEEEeCccccCCCCCCCCCCccCccccccccCCHHHHHHHHHHHHHCCCEEEEEEccCCCCCcc
Confidence 5678888887432211 01134679999999999999999999987665433
No 410
>COG3870 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=38.82 E-value=1.5e+02 Score=23.20 Aligned_cols=60 Identities=15% Similarity=0.190 Sum_probs=38.3
Q ss_pred EEEEecCChHHHHHHHHHCCceEeecC-CCCEEEE---ecCCCCcHHHHHHHHHHHHHHHHHhh
Q 012368 402 IGIEFDVSATPVVDACRDSGLLVLTAG-KGNVVRL---VPPLIISEQELDQAVEILCKTLPVLD 461 (465)
Q Consensus 402 ~~i~~~~~~~~~~~~l~~~Gv~v~~~~-~~~~lRi---~~~~~~t~e~i~~~l~~l~~~l~~~~ 461 (465)
+.+.-+.++.++.+.|.++|.-+..-. .|+++|- .+-....+++++.++..|++..+...
T Consensus 5 iaivqd~da~~l~~~L~d~~fraTkLAsTGGFlkaGNTTfliGved~~vd~~~s~Ike~C~~re 68 (109)
T COG3870 5 IAIVQDQDANELEDALTDKNFRATKLASTGGFLKAGNTTFLIGVEDDRVDALRSLIKENCKSRE 68 (109)
T ss_pred EEEEecccHHHHHHHHHhCCceeEEeeccCceeecCCeEEEEecccchhHHHHHHHHHHhhhHh
Confidence 344336678899999999998764211 1122221 11225578889999999998876543
No 411
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=38.08 E-value=48 Score=26.50 Aligned_cols=55 Identities=25% Similarity=0.367 Sum_probs=35.2
Q ss_pred EEEEecCChHHHHHHHHHCCceEee----cCC---CCEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 012368 402 IGIEFDVSATPVVDACRDSGLLVLT----AGK---GNVVRLVPPLIISEQELDQAVEILCKTLPV 459 (465)
Q Consensus 402 ~~i~~~~~~~~~~~~l~~~Gv~v~~----~~~---~~~lRi~~~~~~t~e~i~~~l~~l~~~l~~ 459 (465)
+.+.-+.++..+.++|.++|+.+.. +|. |+. .+-....++++++.++.|++..++
T Consensus 5 iaIVqd~Da~~l~~~L~~~g~~~TkLsstGGFLr~GNt---TlliGvede~v~~vl~iIk~~c~~ 66 (109)
T PF06153_consen 5 IAIVQDEDADDLSDALNENGFRVTKLSSTGGFLREGNT---TLLIGVEDEKVDEVLEIIKENCKK 66 (109)
T ss_dssp EEEEEHHHHHHHHHHHHHTT--EEEEEEEETTTTEEEE---EEEEEEEGGGHHHHHHHHHHHH--
T ss_pred EEEEcHhhHHHHHHHHHHCCceEEEEecccceeccCCE---EEEEEecHHHHHHHHHHHHHhhcC
Confidence 3444356778899999999998752 332 222 112256889999999999987765
No 412
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=37.21 E-value=3.8e+02 Score=25.69 Aligned_cols=116 Identities=10% Similarity=0.147 Sum_probs=62.5
Q ss_pred HHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcC--CcccCccccccccCCCCcCCCCCC
Q 012368 145 LAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTN--SFHGRTMGALALTSKEHYRSPFEP 222 (465)
Q Consensus 145 la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~--~yhg~~~~~~~~~~~~~~~~~~~~ 222 (465)
++..-.+.....+|++|.|.+..++.-++.|..-. ++-.|++.++ .+.|+.... .+ ..
T Consensus 152 Ia~Qa~ehihsnEviLT~g~SrTV~~FL~~A~kk~---------Rkf~viVaE~~p~~qgH~~Ak-~l----------a~ 211 (353)
T KOG1465|consen 152 IAVQAIEHIHSNEVILTLGSSRTVENFLKHAAKKG---------RKFRVIVAEGAPNNQGHELAK-PL----------AQ 211 (353)
T ss_pred HHHHHHHHhccCceEEecCccHHHHHHHHHHHhcc---------CceEEEEeecCCcccchHhhH-HH----------HH
Confidence 33333344456789999999999999888887421 1334555543 333322111 00 00
Q ss_pred CCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 012368 223 VMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF 285 (465)
Q Consensus 223 ~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (465)
...+...+| | .++-+.+..-....+-.-.+.++||.+.+.- -..++..+++|-+.+|+
T Consensus 212 ~giettVI~--d-aaVfA~MsrVnKVIigt~avl~NGgl~~~~G--~~~vAlaAk~h~vPv~V 269 (353)
T KOG1465|consen 212 AGIETTVIP--D-AAVFAMMSRVNKVIIGTHAVLANGGLRAPSG--VHTVALAAKHHSVPVIV 269 (353)
T ss_pred cCCeeEEec--c-HHHHHHhhhcceEEEEeeeEecCCCeeccch--HHHHHHHHHhcCCcEEE
Confidence 011122333 4 3344444321222333334788899776654 45677778889898886
No 413
>PF02677 DUF208: Uncharacterized BCR, COG1636; InterPro: IPR003828 This entry describes proteins of unknown function.
Probab=36.75 E-value=68 Score=28.09 Aligned_cols=37 Identities=19% Similarity=0.292 Sum_probs=30.2
Q ss_pred CCeEEEEEcccCCCCCcccCCHHH---HHHHHHHHHHhCCEEEEec
Q 012368 245 GKTAAVFVEPIQGEGGIYSATKEF---LQFLRDACDDAGALLVFDE 287 (465)
Q Consensus 245 ~~~a~vi~ep~~~~~G~~~~~~~~---l~~l~~l~~~~g~llI~DE 287 (465)
.++.+++.+|+ |.|..|| ++++.++|++.|+-+|.++
T Consensus 23 ~~vt~~fyNPN------IhP~~Ey~~R~~~~~~~~~~~~i~~i~~~ 62 (176)
T PF02677_consen 23 FDVTGYFYNPN------IHPYEEYERRLEELKRFAEKLGIPLIEGD 62 (176)
T ss_pred CCeEEEEeCCC------CCcHHHHHHHHHHHHHHHHHcCCCEEecC
Confidence 47888888886 5566676 5678889999999999988
No 414
>PRK10785 maltodextrin glucosidase; Provisional
Probab=36.44 E-value=71 Score=34.07 Aligned_cols=58 Identities=21% Similarity=0.259 Sum_probs=41.0
Q ss_pred CHHHHHhhcC---CCCeEEEEEcccCCCCCcc-------------cCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 012368 234 NIEATRKLIQ---PGKTAAVFVEPIQGEGGIY-------------SATKEFLQFLRDACDDAGALLVFDEVQCG 291 (465)
Q Consensus 234 d~~~le~~l~---~~~~a~vi~ep~~~~~G~~-------------~~~~~~l~~l~~l~~~~g~llI~DEv~~g 291 (465)
|++.+.+.|. .-.+-+|.+.|+..+.+.- .-+.+.+++|++.|+++|+-||.|=|...
T Consensus 177 Dl~GI~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V~NH 250 (598)
T PRK10785 177 DLDGISEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGVFNH 250 (598)
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECCCc
Confidence 6666655554 2357899999976553210 11346799999999999999999999543
No 415
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=35.43 E-value=1.2e+02 Score=22.76 Aligned_cols=44 Identities=14% Similarity=0.168 Sum_probs=30.9
Q ss_pred HHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEec
Q 012368 236 EATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDE 287 (465)
Q Consensus 236 ~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DE 287 (465)
++..+.|+.++..+|++-..- ++...+.+..+|+++++.++.-+
T Consensus 17 ~~v~kai~~gkaklViiA~D~--------~~~~~~~i~~~c~~~~Vp~~~~~ 60 (82)
T PRK13602 17 KQTVKALKRGSVKEVVVAEDA--------DPRLTEKVEALANEKGVPVSKVD 60 (82)
T ss_pred HHHHHHHHcCCeeEEEEECCC--------CHHHHHHHHHHHHHcCCCEEEEC
Confidence 455666665566777765432 33568899999999999887544
No 416
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=35.09 E-value=86 Score=29.30 Aligned_cols=50 Identities=14% Similarity=0.189 Sum_probs=36.3
Q ss_pred HHHHHhhcC--CCCeEEEEEcccCCCCCc--ccCCHHHHHHHHHHHHHhCCEEE
Q 012368 235 IEATRKLIQ--PGKTAAVFVEPIQGEGGI--YSATKEFLQFLRDACDDAGALLV 284 (465)
Q Consensus 235 ~~~le~~l~--~~~~a~vi~ep~~~~~G~--~~~~~~~l~~l~~l~~~~g~llI 284 (465)
.+.|.+++. +...-.+|++|.+|.|.. -.++..|...|.+|-+.-|+.+|
T Consensus 18 W~~l~~a~~~~p~~~f~vIiNP~sGPG~~~~~~pd~~Y~~~i~~L~~~~nv~vl 71 (253)
T PF12138_consen 18 WDPLYDAIAAHPSVPFTVIINPNSGPGSAPDPWPDANYAAAIPRLNSYANVRVL 71 (253)
T ss_pred hHHHHHHHhcCCCCcEEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcEE
Confidence 455655565 334568999999988743 34899999999999766677665
No 417
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=34.47 E-value=73 Score=31.93 Aligned_cols=56 Identities=18% Similarity=0.194 Sum_probs=40.8
Q ss_pred EeeCCCHHHHHhhcCCCCeEEEEEcccCC--------CCCcccCCHHHHHHHHHHHHHhCCEEE
Q 012368 229 FVEYGNIEATRKLIQPGKTAAVFVEPIQG--------EGGIYSATKEFLQFLRDACDDAGALLV 284 (465)
Q Consensus 229 ~~~~~d~~~le~~l~~~~~a~vi~ep~~~--------~~G~~~~~~~~l~~l~~l~~~~g~llI 284 (465)
..+..|+|++.+.++..++.++++|.+|. .+|.+.--++--.+|.++|++.|+.++
T Consensus 151 l~aEt~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~f 214 (456)
T COG1066 151 LLAETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIF 214 (456)
T ss_pred EehhcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEE
Confidence 34445889999988877788999998754 234443345667889999999998654
No 418
>PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed
Probab=33.95 E-value=1.5e+02 Score=28.52 Aligned_cols=19 Identities=11% Similarity=0.134 Sum_probs=13.4
Q ss_pred CceEEEEcCCcccCccccc
Q 012368 190 ATEFVSFTNSFHGRTMGAL 208 (465)
Q Consensus 190 ~~~ii~~~~~yhg~~~~~~ 208 (465)
+..+|+..+.|-.+.....
T Consensus 123 gkgvI~lt~H~GnwE~~~~ 141 (305)
T PRK08025 123 NRGVMVVGVHFMSLELGGR 141 (305)
T ss_pred CCCEEEEecchhHHHHHHH
Confidence 5568889888866665443
No 419
>TIGR03853 matur_matur probable metal-binding protein. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulfatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulfur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulfatase/maturase systems.
Probab=33.40 E-value=68 Score=23.80 Aligned_cols=48 Identities=10% Similarity=0.049 Sum_probs=32.9
Q ss_pred HHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCc
Q 012368 142 QIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSF 200 (465)
Q Consensus 142 ~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~y 200 (465)
..+|.+.+.+.+|.+.-+.|+|+.+-....+-..+. .+.|++-.+++|
T Consensus 20 ~~~L~~~i~~~FG~~arFhTCSa~~m~a~~Li~FL~-----------~kgKfi~~~~gf 67 (77)
T TIGR03853 20 RESLKAAIEQKFGEDARFHTCSAEGMTADELLQFLL-----------KKGKFIESDGGF 67 (77)
T ss_pred HHHHHHHHHHHhCCCceEeecccccCCHHHHHHHHH-----------HCCCEeecCCcE
Confidence 678999999999988888888865543333332221 366787776655
No 420
>PRK13601 putative L7Ae-like ribosomal protein; Provisional
Probab=32.82 E-value=67 Score=24.19 Aligned_cols=46 Identities=13% Similarity=0.288 Sum_probs=32.0
Q ss_pred HHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 012368 236 EATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQ 289 (465)
Q Consensus 236 ~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (465)
+...++++..+..+||+-..- ++...+.+.++|+++++.++.....
T Consensus 14 ~~vlkaIk~gkakLViiA~Da--------~~~~~k~i~~~c~~~~Vpv~~~~t~ 59 (82)
T PRK13601 14 KQTLKAITNCNVLQVYIAKDA--------EEHVTKKIKELCEEKSIKIVYIDTM 59 (82)
T ss_pred HHHHHHHHcCCeeEEEEeCCC--------CHHHHHHHHHHHHhCCCCEEEeCCH
Confidence 445555655567777765432 4566899999999999999765443
No 421
>PF00408 PGM_PMM_IV: Phosphoglucomutase/phosphomannomutase, C-terminal domain; InterPro: IPR005843 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []. PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents the C-terminal domain alpha-D-phosphohexomutase enzymes.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 1KFQ_B 1KFI_A 3PDK_B 2F7L_A 1TUO_A 2FKM_X 3C04_A 1K2Y_X 1P5G_X 2H4L_X ....
Probab=32.15 E-value=1e+02 Score=22.26 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=26.9
Q ss_pred EeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 012368 424 VLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLP 458 (465)
Q Consensus 424 v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l~ 458 (465)
++|+|....+|++.-.. +.+.+++..+.+.+.++
T Consensus 40 vR~SgTEP~iRv~~Ea~-~~~~~~~~~~~i~~~ik 73 (73)
T PF00408_consen 40 VRPSGTEPKIRVYVEAP-DEEELEEIAEEIAEAIK 73 (73)
T ss_dssp EEEESSSSEEEEEEEES-SHHHHHHHHHHHHHHHH
T ss_pred EECCCCCceEEEEEEeC-CHHHHHHHHHHHHHhhC
Confidence 67888778899987655 88888888888877653
No 422
>PF13167 GTP-bdg_N: GTP-binding GTPase N-terminal
Probab=32.11 E-value=1.6e+02 Score=22.86 Aligned_cols=54 Identities=17% Similarity=0.254 Sum_probs=31.9
Q ss_pred CHHHHHhhcC--CCCeEE-EEEcccCCCCCcccCCHHHHHHHHHHHHHhCC-EEEEecc
Q 012368 234 NIEATRKLIQ--PGKTAA-VFVEPIQGEGGIYSATKEFLQFLRDACDDAGA-LLVFDEV 288 (465)
Q Consensus 234 d~~~le~~l~--~~~~a~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~-llI~DEv 288 (465)
++++++.+.+ +..+.. ++.....+++.... ..+-+++|.++++++++ ++|+|+-
T Consensus 9 ~l~El~~L~~t~g~~vv~~~~q~~~~~~p~~~i-G~GK~eei~~~~~~~~~d~vvfd~~ 66 (95)
T PF13167_consen 9 SLEELEELAETAGYEVVGTVVQKRRKPDPKTYI-GSGKVEEIKELIEELDADLVVFDNE 66 (95)
T ss_pred HHHHHHHHHHHCCCeEEEEEEecCCCCCcceee-chhHHHHHHHHHhhcCCCEEEECCC
Confidence 3556666554 233333 33332334444443 67889999999999887 5666653
No 423
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=31.82 E-value=1.1e+02 Score=24.51 Aligned_cols=46 Identities=20% Similarity=0.101 Sum_probs=31.7
Q ss_pred HHHHhhcCCCCeEEEEEcccC-CCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 012368 236 EATRKLIQPGKTAAVFVEPIQ-GEGGIYSATKEFLQFLRDACDDAGALLVF 285 (465)
Q Consensus 236 ~~le~~l~~~~~a~vi~ep~~-~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (465)
..+.+.+...++.+||..|.+ +..+. ...-..|++.|.+|++.++.
T Consensus 60 ~~i~~~i~~g~i~~VInt~~~~~~~~~----~~dg~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 60 QQIGALIAEGEIDAVIFFRDPLTAQPH----EPDVKALLRLCDVYNIPLAT 106 (115)
T ss_pred hHHHHHHHcCceeEEEEcCCCCCCCcc----cccHHHHHHHHHHcCCCEEE
Confidence 345566666689999888764 33221 22256899999999998874
No 424
>PF10678 DUF2492: Protein of unknown function (DUF2492); InterPro: IPR019620 This entry describes a family of small cytosolic proteins, about 80 amino acids in length, in which the eight invariant residues include three His residues and two Cys residues. Two pairs of these invariant residues occur in motifs HxH (where x is A or G) and CxH, both of which suggest metal-binding activity. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulphatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulphur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulphatase/maturase systems.
Probab=30.67 E-value=71 Score=23.81 Aligned_cols=48 Identities=13% Similarity=0.134 Sum_probs=32.1
Q ss_pred HHHHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEcCCc
Q 012368 142 QIELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFTNSF 200 (465)
Q Consensus 142 ~~~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~~~y 200 (465)
.++|.+.+.+.+|.+.-+.|+|+..-....+-..+. .|.|++..+.+|
T Consensus 22 ~~~L~~ai~~~FG~~arFhTCSae~m~a~eLv~FL~-----------~rgKfi~~~~g~ 69 (78)
T PF10678_consen 22 KEELKAAIIEKFGEDARFHTCSAEGMTADELVDFLE-----------ERGKFIPSDDGF 69 (78)
T ss_pred HHHHHHHHHHHhCCCceEEecCCCCCCHHHHHHHHH-----------HcCCEeecCCCE
Confidence 678999999999988778888765433333322221 367788766554
No 425
>TIGR02237 recomb_radB DNA repair and recombination protein RadB. This family consists exclusively of archaeal RadB protein, a homolog of bacterial RecA (TIGR02012), eukaryotic RAD51 (TIGR02239) and DMC1 (TIGR02238), and archaeal RadA (TIGR02236).
Probab=30.58 E-value=2e+02 Score=25.55 Aligned_cols=54 Identities=19% Similarity=0.160 Sum_probs=30.3
Q ss_pred HHHhhcCCCCeEEEEEcccCCCCC-cccCC--------HHHHHHHHHHHHHhCCEEE-Eecccc
Q 012368 237 ATRKLIQPGKTAAVFVEPIQGEGG-IYSAT--------KEFLQFLRDACDDAGALLV-FDEVQC 290 (465)
Q Consensus 237 ~le~~l~~~~~a~vi~ep~~~~~G-~~~~~--------~~~l~~l~~l~~~~g~llI-~DEv~~ 290 (465)
.+.+.+....+..|++|++..--. ..... .+.+..|.++++++++.++ +.++.+
T Consensus 88 ~l~~~~~~~~~~lvVIDSis~l~~~~~~~~~~~~~~~l~~~~~~L~~~~~~~~v~vl~t~~~~~ 151 (209)
T TIGR02237 88 KTSKFIDRDSASLVVVDSFTALYRLELSDDRISRNRELARQLTLLLSLARKKNLAVVITNQVYT 151 (209)
T ss_pred HHHHHHhhcCccEEEEeCcHHHhHHHhCCccHHHHHHHHHHHHHHHHHHHHcCCEEEEEcccEE
Confidence 344444444678999999754210 00001 1234557888899998665 455544
No 426
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=30.14 E-value=96 Score=23.94 Aligned_cols=41 Identities=12% Similarity=0.228 Sum_probs=29.8
Q ss_pred HHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 012368 236 EATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF 285 (465)
Q Consensus 236 ~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (465)
..++..+..-+...++++.+.+. ....+.+.|+++|+.++.
T Consensus 40 ~~l~~~i~~aD~VIv~t~~vsH~---------~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 40 SRLPSKIKKADLVIVFTDYVSHN---------AMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred hHHHHhcCCCCEEEEEeCCcChH---------HHHHHHHHHHHcCCcEEE
Confidence 35777776545666666666544 277899999999998885
No 427
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=30.14 E-value=5.3e+02 Score=25.27 Aligned_cols=21 Identities=5% Similarity=-0.053 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHhCCEEEEe
Q 012368 266 KEFLQFLRDACDDAGALLVFD 286 (465)
Q Consensus 266 ~~~l~~l~~l~~~~g~llI~D 286 (465)
......+.++|+++|+.+|+.
T Consensus 146 ~~~~~~l~~~A~~~gi~~Il~ 166 (343)
T TIGR03573 146 HAIFASVYQVALKFNIPLIIW 166 (343)
T ss_pred hHHHHHHHHHHHHhCCCEEEe
Confidence 344678889999999988865
No 428
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=29.27 E-value=1.1e+02 Score=28.00 Aligned_cols=52 Identities=8% Similarity=0.083 Sum_probs=32.3
Q ss_pred CHHHHHhhc----CCCCeEEEEEcccCCCC-CcccCCH-----HHHHHHHHHHHHhCCEEEE
Q 012368 234 NIEATRKLI----QPGKTAAVFVEPIQGEG-GIYSATK-----EFLQFLRDACDDAGALLVF 285 (465)
Q Consensus 234 d~~~le~~l----~~~~~a~vi~ep~~~~~-G~~~~~~-----~~l~~l~~l~~~~g~llI~ 285 (465)
++++++..+ ...++..|++++.+.-. +....++ .+++.|.++|+++|+.+|+
T Consensus 107 ~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 107 TVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 445554443 23467899999975421 1100111 4578899999999998775
No 429
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=29.16 E-value=1.1e+02 Score=32.10 Aligned_cols=59 Identities=10% Similarity=0.080 Sum_probs=39.0
Q ss_pred CHHHHHhhcC---CCCeEEEEEcccCCCCCc---c-----------cCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 234 NIEATRKLIQ---PGKTAAVFVEPIQGEGGI---Y-----------SATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 234 d~~~le~~l~---~~~~a~vi~ep~~~~~G~---~-----------~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
|+..+.+.+. .-.+.+|.+.|++..+.. . .-+.+.++++.+.|+++|+-||.|=|....
T Consensus 25 ~~~gi~~~l~yl~~lG~~~i~l~Pi~~~~~~~~gY~~~d~~~id~~~Gt~~~~~~lv~~ah~~gi~vilD~v~NH~ 100 (543)
T TIGR02403 25 DLRGIIEKLDYLKKLGVDYIWLNPFYVSPQKDNGYDVSDYYAINPLFGTMADFEELVSEAKKRNIKIMLDMVFNHT 100 (543)
T ss_pred CHHHHHHhHHHHHHcCCCEEEECCcccCCCCCCCCCccccCccCcccCCHHHHHHHHHHHHHCCCEEEEEECcccc
Confidence 4444444332 225678888887654321 1 113467999999999999999999885433
No 430
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=29.07 E-value=5e+02 Score=24.59 Aligned_cols=117 Identities=14% Similarity=0.116 Sum_probs=56.8
Q ss_pred HHHHHHHhhcCCCeEEecCCHHHHHHHHHHHHHHHhhhcCCCCCCCCceEEEEc--CCcccCccccccccCCCCcCCCCC
Q 012368 144 ELAKRLVACSFADRVFFSNTGTEANEAAIKFARKFQRHSNPDSKEPATEFVSFT--NSFHGRTMGALALTSKEHYRSPFE 221 (465)
Q Consensus 144 ~la~~l~~~~~~~~v~~~~sG~eA~~~al~~a~~~t~~~~~~~~~~~~~ii~~~--~~yhg~~~~~~~~~~~~~~~~~~~ 221 (465)
.+++.-+++.....+++|.|-+..+..+++.+.... .+-+|++.+ |.+.|... +..+..
T Consensus 98 ~I~~~a~~~I~~g~~ILTh~~S~tv~~~l~~A~~~g---------k~~~V~v~EsrP~~qG~~l-a~eL~~--------- 158 (275)
T PRK08335 98 EIGNIGSELIDDGDVIITHSFSSAVLEILKTAKRKG---------KRFKVILTESAPDYEGLAL-ANELEF--------- 158 (275)
T ss_pred HHHHHHHHHcCCCCEEEEECCcHHHHHHHHHHHHcC---------CceEEEEecCCCchhHHHH-HHHHHH---------
Confidence 343444444444456777776666666666555311 234566655 45545443 222211
Q ss_pred CCCCCceEeeCCCHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 012368 222 PVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF 285 (465)
Q Consensus 222 ~~~~~~~~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (465)
..-.+..++-+-...+ +..-+...+=.+.+..+|++.. .-+ --.++-+|+.|++.+++
T Consensus 159 -~GI~vtlI~Dsa~~~~---m~~vd~VivGAD~I~~nG~v~N-KiG-T~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 159 -LGIEFEVITDAQLGLF---AKEATLALVGADNVTRDGYVVN-KAG-TYLLALACHDNGVPFYV 216 (275)
T ss_pred -CCCCEEEEeccHHHHH---HHhCCEEEECccEEecCCCEee-hhh-HHHHHHHHHHcCCCEEE
Confidence 1112333332222222 3211222222566777776543 223 23567788999998875
No 431
>COG3964 Predicted amidohydrolase [General function prediction only]
Probab=28.47 E-value=93 Score=29.78 Aligned_cols=68 Identities=15% Similarity=0.343 Sum_probs=43.1
Q ss_pred HHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccccc------ccCCcc
Q 012368 235 IEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHE------HYGIFP 308 (465)
Q Consensus 235 ~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~------~~~~~p 308 (465)
.+++-+.|+..+ ||.-+.++-++.++.+.+.+....+.|++.|+ |+|--+. + ..|++. ..|+-|
T Consensus 199 ~dEvlerL~~GD---IitHcfngkpn~~l~~dg~vr~~vrra~erGV--~fD~ghG---~--asfsf~vAr~aia~GllP 268 (386)
T COG3964 199 MDEVLERLRRGD---IITHCFNGKPNTILTDDGVVRAEVRRARERGV--IFDAGHG---R--ASFSFNVARRAIANGLLP 268 (386)
T ss_pred HHHHHHhccCCc---eeeeeccCCCCCccccchhHHHHHHHHHhcce--EEEccCC---c--ceeeHHHHHHHHhcCCCc
Confidence 366666776444 44555666666677788889999999999996 5564331 1 122222 247778
Q ss_pred cEEE
Q 012368 309 DIMT 312 (465)
Q Consensus 309 di~t 312 (465)
|+++
T Consensus 269 ~~IS 272 (386)
T COG3964 269 DIIS 272 (386)
T ss_pred ceee
Confidence 8764
No 432
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=27.80 E-value=1e+02 Score=27.17 Aligned_cols=50 Identities=14% Similarity=0.352 Sum_probs=29.8
Q ss_pred HHHHHhhcCCCCeEEEEEcccCCC----CC-cccCCHHHHHHHHHHHHHhCCEEE
Q 012368 235 IEATRKLIQPGKTAAVFVEPIQGE----GG-IYSATKEFLQFLRDACDDAGALLV 284 (465)
Q Consensus 235 ~~~le~~l~~~~~a~vi~ep~~~~----~G-~~~~~~~~l~~l~~l~~~~g~llI 284 (465)
++.+-+.++......|++.|.... ++ ....-..+-+.++++|+++|+.++
T Consensus 96 l~~ii~~~~~~~~~~il~tp~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 150 (198)
T cd01821 96 LRRYIAEARAKGATPILVTPVTRRTFDEGGKVEDTLGDYPAAMRELAAEEGVPLI 150 (198)
T ss_pred HHHHHHHHHHCCCeEEEECCccccccCCCCcccccchhHHHHHHHHHHHhCCCEE
Confidence 333333333335667777775321 11 112345778899999999998774
No 433
>PRK09505 malS alpha-amylase; Reviewed
Probab=27.66 E-value=1.4e+02 Score=32.47 Aligned_cols=61 Identities=20% Similarity=0.281 Sum_probs=41.4
Q ss_pred CCHHHHHhhcC---CCCeEEEEEcccCCC------------------CCc----------ccCCHHHHHHHHHHHHHhCC
Q 012368 233 GNIEATRKLIQ---PGKTAAVFVEPIQGE------------------GGI----------YSATKEFLQFLRDACDDAGA 281 (465)
Q Consensus 233 ~d~~~le~~l~---~~~~a~vi~ep~~~~------------------~G~----------~~~~~~~l~~l~~l~~~~g~ 281 (465)
.|+..+.+.|. .-.+-+|.+.|+.-+ -|. ..-+.+.++++++.|+++|+
T Consensus 227 Gdl~Gi~~kLdyl~~LGv~aIwlsPi~~~~~~~~~~g~~g~~~~~~yhgY~~~D~~~id~~~Gt~~dfk~Lv~~aH~~Gi 306 (683)
T PRK09505 227 GDLRGLTEKLDYLQQLGVNALWISSPLEQIHGWVGGGTKGDFPHYAYHGYYTLDWTKLDANMGTEADLRTLVDEAHQRGI 306 (683)
T ss_pred CCHHHHHHhhHHHHHcCCCEEEeCccccccccccccccccCCCcCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHCCC
Confidence 36666666554 335678888886322 011 11245789999999999999
Q ss_pred EEEEeccccCCC
Q 012368 282 LLVFDEVQCGLG 293 (465)
Q Consensus 282 llI~DEv~~g~g 293 (465)
-||+|-|....+
T Consensus 307 ~VilD~V~NH~~ 318 (683)
T PRK09505 307 RILFDVVMNHTG 318 (683)
T ss_pred EEEEEECcCCCc
Confidence 999999965443
No 434
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=27.20 E-value=1.5e+02 Score=31.29 Aligned_cols=59 Identities=14% Similarity=0.157 Sum_probs=39.7
Q ss_pred CHHHHHhhcC---CCCeEEEEEcccCCCC----Ccc----------cCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 234 NIEATRKLIQ---PGKTAAVFVEPIQGEG----GIY----------SATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 234 d~~~le~~l~---~~~~a~vi~ep~~~~~----G~~----------~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
|+..+.+.|. .-.+.+|.+.|+...+ |.- .-+.+.++++++.|+++|+-||+|=|....
T Consensus 31 dl~gi~~~ldyl~~lGv~~i~l~P~~~~~~~~~gY~~~d~~~id~~~Gt~~d~~~lv~~~h~~gi~vilD~V~NH~ 106 (551)
T PRK10933 31 DLRGVTQRLDYLQKLGVDAIWLTPFYVSPQVDNGYDVANYTAIDPTYGTLDDFDELVAQAKSRGIRIILDMVFNHT 106 (551)
T ss_pred CHHHHHHhhHHHHhCCCCEEEECCCCCCCCCCCCCCcccCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence 5555444443 2357789999976432 211 113467999999999999999999996543
No 435
>cd01123 Rad51_DMC1_radA Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar recombination reaction as RecA, using ATP-dependent DNA binding activity and a DNA-dependent ATPase. However, this reaction is less efficient and requires accessory proteins such as RAD55/57 .
Probab=26.91 E-value=77 Score=28.83 Aligned_cols=53 Identities=13% Similarity=0.244 Sum_probs=31.8
Q ss_pred HHhhcCCC-CeEEEEEcccCCCCC-cccCC----------HHHHHHHHHHHHHhCCEEE-Eecccc
Q 012368 238 TRKLIQPG-KTAAVFVEPIQGEGG-IYSAT----------KEFLQFLRDACDDAGALLV-FDEVQC 290 (465)
Q Consensus 238 le~~l~~~-~~a~vi~ep~~~~~G-~~~~~----------~~~l~~l~~l~~~~g~llI-~DEv~~ 290 (465)
+++.+... ++..|++|++..--. ..... .+++..|..+|+++++.++ ..++..
T Consensus 106 l~~~l~~~~~~~liVIDSis~~~~~~~~~~~~~~~r~~~l~~~~~~L~~la~~~~~avl~tn~~~~ 171 (235)
T cd01123 106 LEAILIESSRIKLVIVDSVTALFRAEFDGRGELAERQQHLAKLLRTLKRLADEFNVAVVITNQVTA 171 (235)
T ss_pred HHHHHhhcCCeeEEEEeCcHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHhCCEEEEeccEee
Confidence 44445444 789999999854210 00001 2456778889999998655 454443
No 436
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=26.80 E-value=4.7e+02 Score=23.46 Aligned_cols=34 Identities=18% Similarity=0.286 Sum_probs=26.5
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 012368 247 TAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFD 286 (465)
Q Consensus 247 ~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D 286 (465)
+.+|+++-.| ..+++....|.+++++.|+.+|+=
T Consensus 83 ~~~v~IDEaQ------F~~~~~v~~l~~lad~lgi~Vi~~ 116 (201)
T COG1435 83 VDCVLIDEAQ------FFDEELVYVLNELADRLGIPVICY 116 (201)
T ss_pred cCEEEEehhH------hCCHHHHHHHHHHHhhcCCEEEEe
Confidence 5688888765 346777888999999889988864
No 437
>PRK11823 DNA repair protein RadA; Provisional
Probab=26.27 E-value=1.1e+02 Score=31.29 Aligned_cols=56 Identities=23% Similarity=0.229 Sum_probs=36.9
Q ss_pred eeCCCHHHHHhhcCCCCeEEEEEcccCCCC--------CcccCCHHHHHHHHHHHHHhCCEEEE
Q 012368 230 VEYGNIEATRKLIQPGKTAAVFVEPIQGEG--------GIYSATKEFLQFLRDACDDAGALLVF 285 (465)
Q Consensus 230 ~~~~d~~~le~~l~~~~~a~vi~ep~~~~~--------G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (465)
....+++.+.+.++..++..|++|+++.-- |....-.+.+..|.++++++|+.+++
T Consensus 140 ~~e~~l~~i~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~~ak~~~itvil 203 (446)
T PRK11823 140 LAETNLEAILATIEEEKPDLVVIDSIQTMYSPELESAPGSVSQVRECAAELMRLAKQRGIAVFL 203 (446)
T ss_pred eCCCCHHHHHHHHHhhCCCEEEEechhhhccccccCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 334578888888875577899999986421 11111134566789999999985543
No 438
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=25.73 E-value=4.2e+02 Score=22.59 Aligned_cols=49 Identities=22% Similarity=0.386 Sum_probs=29.7
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh-CCEEEEeccccCCCCCC
Q 012368 246 KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDA-GALLVFDEVQCGLGRTG 296 (465)
Q Consensus 246 ~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~~g~gr~g 296 (465)
+.+.+-+..+....|...++.+.-.--+.+++.- ..++++|..- |++.+
T Consensus 94 d~afi~~~gi~~~~G~~~~~~~~a~vk~~~~~~s~~~ill~D~sK--f~~~~ 143 (161)
T PF00455_consen 94 DKAFIGADGISEEGGLTTSDEEEAEVKRAMIENSKQVILLADSSK--FGRNS 143 (161)
T ss_pred ceEEecccEecCCCccccchHHHHHHHHHHHHhcCeEEEEeChhh--cCCee
Confidence 5677777778877787766665543333333332 4677888643 55554
No 439
>TIGR00416 sms DNA repair protein RadA. The gene protuct codes for a probable ATP-dependent protease involved in both DNA repair and degradation of proteins, peptides, glycopeptides. Also known as sms. Residues 11-28 of the SEED alignment contain a putative Zn binding domain. Residues 110-117 of the seed contain a putative ATP binding site both documented in Haemophilus and in Listeria monocytogenes. for E.coli see ( J. BACTERIOL. 178:5045-5048(1996)).
Probab=25.55 E-value=1e+02 Score=31.58 Aligned_cols=56 Identities=20% Similarity=0.148 Sum_probs=37.0
Q ss_pred EeeCCCHHHHHhhcCCCCeEEEEEcccCCCC--------CcccCCHHHHHHHHHHHHHhCCEEE
Q 012368 229 FVEYGNIEATRKLIQPGKTAAVFVEPIQGEG--------GIYSATKEFLQFLRDACDDAGALLV 284 (465)
Q Consensus 229 ~~~~~d~~~le~~l~~~~~a~vi~ep~~~~~--------G~~~~~~~~l~~l~~l~~~~g~llI 284 (465)
.+...+++.+.+.++..+...|++|+++.-. |....-++++..|.++++++|+.++
T Consensus 153 ~~~e~~~~~I~~~i~~~~~~~vVIDSIq~l~~~~~~~~~g~~~q~r~~~~~L~~~ak~~giTvl 216 (454)
T TIGR00416 153 VLSETNWEQICANIEEENPQACVIDSIQTLYSPDISSAPGSVSQVRECTAELMRLAKTRGIAIF 216 (454)
T ss_pred EcCCCCHHHHHHHHHhcCCcEEEEecchhhcccccccCCCCHHHHHHHHHHHHHHHHHhCCEEE
Confidence 3444578888888876567899999986421 2111123456678899999997443
No 440
>PRK06683 hypothetical protein; Provisional
Probab=25.40 E-value=1.1e+02 Score=22.98 Aligned_cols=47 Identities=11% Similarity=0.022 Sum_probs=32.0
Q ss_pred HHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc
Q 012368 236 EATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC 290 (465)
Q Consensus 236 ~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~ 290 (465)
+...+.++.++...||+=..- ++...+.+.++|+++++.++.-+...
T Consensus 17 ~~v~kaik~gkaklViiA~Da--------~~~~~~~i~~~~~~~~Vpv~~~~t~~ 63 (82)
T PRK06683 17 KRTLEAIKNGIVKEVVIAEDA--------DMRLTHVIIRTALQHNIPITKVESVR 63 (82)
T ss_pred HHHHHHHHcCCeeEEEEECCC--------CHHHHHHHHHHHHhcCCCEEEECCHH
Confidence 445555555567777765432 44568899999999999997655433
No 441
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=25.28 E-value=95 Score=32.84 Aligned_cols=46 Identities=20% Similarity=0.476 Sum_probs=30.9
Q ss_pred HHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc
Q 012368 236 EATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQC 290 (465)
Q Consensus 236 ~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~ 290 (465)
..+...+....+..+++.|-- ..++.|++.|. +-.-.++++||+|+
T Consensus 97 ~~v~~~l~~g~~klLyisPEr------l~~~~f~~~L~---~~~i~l~vIDEAHC 142 (590)
T COG0514 97 QQVLNQLKSGQLKLLYISPER------LMSPRFLELLK---RLPISLVAIDEAHC 142 (590)
T ss_pred HHHHHHHhcCceeEEEECchh------hcChHHHHHHH---hCCCceEEechHHH
Confidence 344444545578999999852 33456676666 33457899999986
No 442
>PRK01018 50S ribosomal protein L30e; Reviewed
Probab=25.08 E-value=2e+02 Score=22.47 Aligned_cols=42 Identities=21% Similarity=0.132 Sum_probs=29.3
Q ss_pred HHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 012368 236 EATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF 285 (465)
Q Consensus 236 ~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (465)
.+..+.++..+..+|++-..- +++..+.+..+|+++++.++.
T Consensus 22 ~~v~kai~~gkaklViiA~D~--------~~~~~~~i~~~c~~~~Ip~~~ 63 (99)
T PRK01018 22 KRTIKAIKLGKAKLVIVASNC--------PKDIKEDIEYYAKLSGIPVYE 63 (99)
T ss_pred HHHHHHHHcCCceEEEEeCCC--------CHHHHHHHHHHHHHcCCCEEE
Confidence 345555655566677765431 456689999999999999865
No 443
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=24.83 E-value=2.1e+02 Score=23.73 Aligned_cols=57 Identities=21% Similarity=0.280 Sum_probs=34.0
Q ss_pred CHHHHHhhcCCCCe-EEEEEcccCCCCCcccCCHHHHHHHHHHHHHh-CCEE-EEecccc
Q 012368 234 NIEATRKLIQPGKT-AAVFVEPIQGEGGIYSATKEFLQFLRDACDDA-GALL-VFDEVQC 290 (465)
Q Consensus 234 d~~~le~~l~~~~~-a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-g~ll-I~DEv~~ 290 (465)
+++.|.++++...+ .+|+=.|.+..|..-.....-.+...++.+++ ++.+ .+||-+|
T Consensus 39 ~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 39 DIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 78899999885444 56666776554433222333334444555555 8755 5899776
No 444
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=24.50 E-value=2e+02 Score=20.25 Aligned_cols=45 Identities=16% Similarity=0.302 Sum_probs=31.9
Q ss_pred hHHHHHHHHHCCceEe--ecCCCCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 410 ATPVVDACRDSGLLVL--TAGKGNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 410 ~~~~~~~l~~~Gv~v~--~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
..++++.|.+.|+-+. ..+. ..+++ ++...+++.++++..|.+.+
T Consensus 18 ~~ki~~~L~~~~I~v~~i~~~~-s~~~i--s~~V~~~~~~~av~~Lh~~f 64 (66)
T cd04915 18 LARGLAALAEAGIEPIAAHQSM-RNVDV--QFVVDRDDYDNAIKALHAAL 64 (66)
T ss_pred HHHHHHHHHHCCCCEEEEEecC-CeeEE--EEEEEHHHHHHHHHHHHHHH
Confidence 5678888989998873 2222 22444 45778899999999998765
No 445
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=24.41 E-value=5.1e+02 Score=23.08 Aligned_cols=41 Identities=15% Similarity=0.115 Sum_probs=25.5
Q ss_pred HHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 012368 236 EATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF 285 (465)
Q Consensus 236 ~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (465)
..++...+++++..+|... ++ + ..+..+.+.++++|+.+|.
T Consensus 101 ~ql~~~~~~gDvli~iS~S--G~------s-~~v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 101 KQVRALGHAGDVLLAISTR--GN------S-RDIVKAVEAAVTRDMTIVA 141 (196)
T ss_pred HHHHHcCCCCCEEEEEeCC--CC------C-HHHHHHHHHHHHCCCEEEE
Confidence 4556556555555444322 11 1 2267888999999999885
No 446
>PF04476 DUF556: Protein of unknown function (DUF556); InterPro: IPR007565 The proteins in this entry are functionally uncharacterised.
Probab=24.21 E-value=5.7e+02 Score=23.57 Aligned_cols=64 Identities=19% Similarity=0.274 Sum_probs=41.2
Q ss_pred CeEEEEEcccCCCCCcc--cCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcccccc---ccCCcccEEEecccCC
Q 012368 246 KTAAVFVEPIQGEGGIY--SATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHE---HYGIFPDIMTLAKPLA 318 (465)
Q Consensus 246 ~~a~vi~ep~~~~~G~~--~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g~~~~~~---~~~~~pdi~t~sK~lg 318 (465)
....+++++-.-.++.. ..+.+.|.+..+.|+++|... ++ -|..-..+ ...+.||++-|=-++.
T Consensus 144 G~~gvMlDTa~Kdg~~L~d~~~~~~L~~Fv~~ar~~gL~~-------aL--AGSL~~~di~~L~~l~pD~lGfRGAvC 212 (235)
T PF04476_consen 144 GFDGVMLDTADKDGGSLFDHLSEEELAEFVAQARAHGLMC-------AL--AGSLRFEDIPRLKRLGPDILGFRGAVC 212 (235)
T ss_pred CCCEEEEecccCCCCchhhcCCHHHHHHHHHHHHHccchh-------hc--cccCChhHHHHHHhcCCCEEEechhhC
Confidence 46788899976666554 467888999999999998743 33 23211111 1246789886654444
No 447
>smart00839 ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine dehydrogenase. Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related. They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction.
Probab=24.19 E-value=2.4e+02 Score=22.06 Aligned_cols=50 Identities=20% Similarity=0.205 Sum_probs=30.4
Q ss_pred HHHHHHHHCCceEeecC---CCCEEEEecCCC----CcHHHHH-HHHHHHHHHHHHhh
Q 012368 412 PVVDACRDSGLLVLTAG---KGNVVRLVPPLI----ISEQELD-QAVEILCKTLPVLD 461 (465)
Q Consensus 412 ~~~~~l~~~Gv~v~~~~---~~~~lRi~~~~~----~t~e~i~-~~l~~l~~~l~~~~ 461 (465)
+-.+.|.++||.+.|.- .|+.+..+.-+. .+++++. +..+.+.+.+.++.
T Consensus 39 ~a~~~L~~rGi~~~PD~~~NaGGvi~s~~E~~~~~~~~~e~v~~~~~~~i~~~~~~v~ 96 (102)
T smart00839 39 EADDILEDRGVLYAPDFAANAGGVIVSALEMLQNLARTAEEVFTDLSEIMRNALEEIF 96 (102)
T ss_pred HHHHHHHHCCCEEcCcceecCCCEEeehhhhhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 35677889999998752 244444332222 2566555 77777777776654
No 448
>PLN03244 alpha-amylase; Provisional
Probab=24.08 E-value=97 Score=33.93 Aligned_cols=32 Identities=22% Similarity=0.218 Sum_probs=27.3
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCCCCC
Q 012368 265 TKEFLQFLRDACDDAGALLVFDEVQCGLGRTG 296 (465)
Q Consensus 265 ~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~g 296 (465)
+++.++.+++.|++.|+-||.|=|+..++..+
T Consensus 439 TPeDLK~LVD~aH~~GI~VILDvV~NH~~~d~ 470 (872)
T PLN03244 439 TPDDFKRLVDEAHGLGLLVFLDIVHSYAAADE 470 (872)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecCccCCCcc
Confidence 45779999999999999999999998776543
No 449
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=24.06 E-value=68 Score=30.27 Aligned_cols=28 Identities=29% Similarity=0.261 Sum_probs=23.8
Q ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 265 TKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 265 ~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
+.+.+++|++.|+++|+-||+|=|....
T Consensus 50 t~~d~~~Lv~~~h~~gi~VilD~V~NH~ 77 (316)
T PF00128_consen 50 TMEDFKELVDAAHKRGIKVILDVVPNHT 77 (316)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEETSEE
T ss_pred hhhhhhhhhhccccccceEEEeeecccc
Confidence 3467999999999999999999996533
No 450
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=23.98 E-value=1.1e+02 Score=27.21 Aligned_cols=37 Identities=19% Similarity=0.169 Sum_probs=27.2
Q ss_pred CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 012368 244 PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF 285 (465)
Q Consensus 244 ~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (465)
+-+.+++|+|-++.. |.+.. ++++.+++++|++.+|.
T Consensus 150 Gl~p~avi~eil~~d-G~~~~----~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 150 GLSPVAVICEILDDD-GDMAR----RDELEEFAKKHGLPIVS 186 (194)
T ss_dssp TS-SBEEEEEBBETT-SSBHC----HHHHHHHHHHTT-EEEE
T ss_pred CCCCcEEEEEEeCCC-CCcCC----HHHHHHHHHHcCCcEEE
Confidence 345789999988774 45544 78889999999999884
No 451
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=23.92 E-value=3.3e+02 Score=26.44 Aligned_cols=55 Identities=15% Similarity=0.256 Sum_probs=32.5
Q ss_pred HHHHhhcCCCCeEEEEEcccCCCC---------Ccc-c--CC---HHHHHHHHHHHHHhCCEEE-Eecccc
Q 012368 236 EATRKLIQPGKTAAVFVEPIQGEG---------GIY-S--AT---KEFLQFLRDACDDAGALLV-FDEVQC 290 (465)
Q Consensus 236 ~~le~~l~~~~~a~vi~ep~~~~~---------G~~-~--~~---~~~l~~l~~l~~~~g~llI-~DEv~~ 290 (465)
+.++.+++...+..|++|++..-- |.. . .. ..++..|..+++++|+.+| .-+++.
T Consensus 123 ~~~~~li~~~~~~lIVIDSv~al~~~~E~e~~~g~~~~~~~aR~m~~~lr~L~~~l~~~~~tvi~tNQvr~ 193 (321)
T TIGR02012 123 EIAETLVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGALSKSNTTAIFINQIRE 193 (321)
T ss_pred HHHHHHhhccCCcEEEEcchhhhccchhhcccccccchhHHHHHHHHHHHHHHHHHHhCCCEEEEEeccee
Confidence 344555555568899999875321 100 0 00 1457778888999998765 344444
No 452
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=23.88 E-value=1.3e+02 Score=27.04 Aligned_cols=35 Identities=20% Similarity=0.219 Sum_probs=27.0
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 012368 246 KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF 285 (465)
Q Consensus 246 ~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (465)
..+++|+|-++.. |.+.. +.++.+++++|++.+|.
T Consensus 157 ~p~~vicEil~~d-G~m~~----~~~~~~fA~~~~l~~is 191 (199)
T TIGR00506 157 KPAGVICEMMNDD-GTMAR----KPELMEYAKKHNLKLIS 191 (199)
T ss_pred CceEEEEEEeCCC-CCccC----HHHHHHHHHHcCCcEEE
Confidence 4689999987664 44443 77889999999998873
No 453
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=23.75 E-value=52 Score=31.50 Aligned_cols=24 Identities=38% Similarity=0.574 Sum_probs=20.0
Q ss_pred HHHHHHHHHH-HHhCCEEEEecccc
Q 012368 267 EFLQFLRDAC-DDAGALLVFDEVQC 290 (465)
Q Consensus 267 ~~l~~l~~l~-~~~g~llI~DEv~~ 290 (465)
..+++|.++| ..++.++|+||.|.
T Consensus 159 sRl~ql~~W~g~dfdgvivfDEcH~ 183 (303)
T PF13872_consen 159 SRLDQLVDWCGEDFDGVIVFDECHK 183 (303)
T ss_pred chHHHHHHHHhcCCCceEEeccchh
Confidence 3489999999 45789999999986
No 454
>TIGR02456 treS_nterm trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530).
Probab=23.70 E-value=1.6e+02 Score=30.91 Aligned_cols=59 Identities=12% Similarity=0.033 Sum_probs=39.5
Q ss_pred CHHHHHhhcC---CCCeEEEEEcccCCCCC----c------cc----CCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 234 NIEATRKLIQ---PGKTAAVFVEPIQGEGG----I------YS----ATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 234 d~~~le~~l~---~~~~a~vi~ep~~~~~G----~------~~----~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
|+..+.+.|. .-.+-+|.+.|+...++ . .+ -+.+.+++|++-|+++|+-||.|=|....
T Consensus 26 dl~gi~~~Ldyl~~LGv~~i~L~Pi~~~~~~~~gY~~~dy~~vd~~~Gt~~df~~Lv~~ah~~Gi~vilD~V~NH~ 101 (539)
T TIGR02456 26 DFPGLTSKLDYLKWLGVDALWLLPFFQSPLRDDGYDVSDYRAILPEFGTIDDFKDFVDEAHARGMRVIIDLVLNHT 101 (539)
T ss_pred CHHHHHHhHHHHHHCCCCEEEECCCcCCCCCCCCCCcccccccChhhCCHHHHHHHHHHHHHCCCEEEEEeccCcC
Confidence 5555544443 22567888889865432 1 01 12367999999999999999999996544
No 455
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=23.44 E-value=1e+02 Score=26.27 Aligned_cols=48 Identities=17% Similarity=0.174 Sum_probs=26.8
Q ss_pred HHHHhhcCCCCeEEEEEccc-CCCCCcccCCHHHHHHHHHHHHHhCCEEE
Q 012368 236 EATRKLIQPGKTAAVFVEPI-QGEGGIYSATKEFLQFLRDACDDAGALLV 284 (465)
Q Consensus 236 ~~le~~l~~~~~a~vi~ep~-~~~~G~~~~~~~~l~~l~~l~~~~g~llI 284 (465)
+.+-+.++......+++.+. .++.+ ......+-+.+.++|+++++.++
T Consensus 91 ~~li~~~~~~~~~vil~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~ 139 (177)
T cd01822 91 RQMIETAQARGAPVLLVGMQAPPNYG-PRYTRRFAAIYPELAEEYGVPLV 139 (177)
T ss_pred HHHHHHHHHCCCeEEEEecCCCCccc-hHHHHHHHHHHHHHHHHcCCcEe
Confidence 33333333334556666543 22222 12245667888899999998666
No 456
>cd04920 ACT_AKiii-DAPDC_2 ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC). This CD includes the second of two ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC) bacterial protein. Aspartokinase (AK) is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The lysA gene encodes the enzyme DAPDC, a pyridoxal-5'-phosphate (PLP)-dependent enzyme which catalyzes the final step in the lysine biosynthetic pathway converting meso-diaminopimelic acid (DAP) to l-lysine. Tandem ACT domains are positioned centrally with the AK catalytic domain N-terminal and the DAPDC domains C-terminal. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=23.24 E-value=1.6e+02 Score=20.53 Aligned_cols=45 Identities=16% Similarity=0.271 Sum_probs=31.8
Q ss_pred hHHHHHHHHHCCceEeecCCCCEEEEecCCCCcHHHHHHHHHHHHHHH
Q 012368 410 ATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 457 (465)
Q Consensus 410 ~~~~~~~l~~~Gv~v~~~~~~~~lRi~~~~~~t~e~i~~~l~~l~~~l 457 (465)
..++++.|.+.+|.+..-+. ..+++ ++...+++.++++.+|.+.+
T Consensus 17 ~~~~~~~L~~~~i~~i~~~~-s~~~i--s~vv~~~d~~~av~~LH~~f 61 (63)
T cd04920 17 LGPALEVFGKKPVHLVSQAA-NDLNL--TFVVDEDQADGLCARLHFQL 61 (63)
T ss_pred HHHHHHHHhcCCceEEEEeC-CCCeE--EEEEeHHHHHHHHHHHHHHH
Confidence 56778888888887755433 22334 45678899999999998765
No 457
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=23.13 E-value=2.1e+02 Score=26.32 Aligned_cols=54 Identities=9% Similarity=0.111 Sum_probs=27.5
Q ss_pred CCHHHHHhhcCC-CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC--CEEEEe
Q 012368 233 GNIEATRKLIQP-GKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAG--ALLVFD 286 (465)
Q Consensus 233 ~d~~~le~~l~~-~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g--~llI~D 286 (465)
..++.++..+.. +.+-.+.++|-.+.-..+....+-+++++++.++++ +.+-+|
T Consensus 129 Tp~~~i~~~l~~vD~VLiMtV~PGfgGQ~f~~~~l~KI~~lr~~~~~~~~~~~IeVD 185 (228)
T PRK08091 129 TPISLLEPYLDQIDLIQILTLDPRTGTKAPSDLILDRVIQVENRLGNRRVEKLISID 185 (228)
T ss_pred CCHHHHHHHHhhcCEEEEEEECCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEE
Confidence 357888877752 233444455533322222222234555556666655 556677
No 458
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=22.87 E-value=1.6e+02 Score=24.74 Aligned_cols=48 Identities=13% Similarity=-0.009 Sum_probs=31.7
Q ss_pred HHHHhhcCCCCeEEEEEcccC-CCCCcccCCHHHHHHHHHHHHHhCCEEEEec
Q 012368 236 EATRKLIQPGKTAAVFVEPIQ-GEGGIYSATKEFLQFLRDACDDAGALLVFDE 287 (465)
Q Consensus 236 ~~le~~l~~~~~a~vi~ep~~-~~~G~~~~~~~~l~~l~~l~~~~g~llI~DE 287 (465)
..+.+.|..+++.+||..|.+ +..+. ...-..|++.|-+|++.++..-
T Consensus 65 ~~i~~~I~~g~i~lVInt~dp~~~~~~----~~D~~~IRR~Av~~~IP~~T~l 113 (142)
T PRK05234 65 QQIGALIAEGKIDMLIFFRDPLTAQPH----DPDVKALLRLADVWNIPVATNR 113 (142)
T ss_pred hhHHHHHHcCceeEEEEecCCCCCCcc----cchHHHHHHHHHHcCCCEEcCH
Confidence 345556666688899887632 22211 1225689999999999998653
No 459
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=22.41 E-value=71 Score=24.07 Aligned_cols=22 Identities=14% Similarity=0.092 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHhCCEEEEeccc
Q 012368 268 FLQFLRDACDDAGALLVFDEVQ 289 (465)
Q Consensus 268 ~l~~l~~l~~~~g~llI~DEv~ 289 (465)
.-++|+++++++|+.++.|...
T Consensus 28 ~A~~I~~~A~e~~VPi~~~~~L 49 (82)
T TIGR00789 28 VAERIIEIAKKHGIPIVEDPDL 49 (82)
T ss_pred HHHHHHHHHHHcCCCEEeCHHH
Confidence 3679999999999999999864
No 460
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=22.26 E-value=2e+02 Score=26.91 Aligned_cols=49 Identities=22% Similarity=0.283 Sum_probs=35.3
Q ss_pred CHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEec
Q 012368 234 NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDE 287 (465)
Q Consensus 234 d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DE 287 (465)
+.+.+++.+. +.-++++-|-.+-. +..-..+++|.+.+++.++.+++|.
T Consensus 91 av~~i~k~L~--RlhavVIGPGLGRd---p~~~k~i~~iley~~~~dvP~VIDa 139 (306)
T KOG3974|consen 91 AVDIIEKLLQ--RLHAVVIGPGLGRD---PAILKEIAKILEYLRGKDVPLVIDA 139 (306)
T ss_pred hHhHHHHHHh--heeEEEECCCCCCC---HHHHHHHHHHHHHHhcCCCcEEEcC
Confidence 4566777664 56788887765542 2233558899999999999999994
No 461
>PRK11633 cell division protein DedD; Provisional
Probab=22.11 E-value=3.3e+02 Score=24.95 Aligned_cols=49 Identities=22% Similarity=0.209 Sum_probs=38.1
Q ss_pred CChHHHHHHHHHCCceEee--c--CCCCEEEEecCCCCcHHHHHHHHHHHHHH
Q 012368 408 VSATPVVDACRDSGLLVLT--A--GKGNVVRLVPPLIISEQELDQAVEILCKT 456 (465)
Q Consensus 408 ~~~~~~~~~l~~~Gv~v~~--~--~~~~~lRi~~~~~~t~e~i~~~l~~l~~~ 456 (465)
.++..+...|...|+-... . ..|.+.|+++.-..++++++.++..|++.
T Consensus 161 ~~A~~l~~kL~~~G~~Ay~~~~~~~~G~~tRV~VGP~~sk~~ae~~~~~Lk~~ 213 (226)
T PRK11633 161 DKVNEIVAKLRLSGYRVYTVPSTPVQGKITRIYVGPDASKDKLKGSLGELKQL 213 (226)
T ss_pred HHHHHHHHHHHHCCCeeEEEeeecCCCcEEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 3467789999999976543 1 23467889888889999999999999874
No 462
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=21.59 E-value=1.7e+02 Score=24.43 Aligned_cols=48 Identities=15% Similarity=0.239 Sum_probs=29.0
Q ss_pred CHHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 012368 234 NIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFD 286 (465)
Q Consensus 234 d~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D 286 (465)
+++.+-+.+.+ ....+++.|..+ ..+..++-+.+.++|++|.-+.++|
T Consensus 68 nl~~ii~~~~~-~~~ivlv~~~~~----~~~~~~~n~~~~~~a~~~~~v~~id 115 (150)
T cd01840 68 QLDELLDALGP-DRQVYLVNPHVP----RPWEPDVNAYLLDAAKKYKNVTIID 115 (150)
T ss_pred HHHHHHHHcCC-CCEEEEEECCCC----cchHHHHHHHHHHHHHHCCCcEEec
Confidence 45555555543 356777777522 2345677788999999994344444
No 463
>COG1349 GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]
Probab=21.53 E-value=6.6e+02 Score=23.33 Aligned_cols=50 Identities=22% Similarity=0.280 Sum_probs=32.7
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHH-hCCEEEEeccccCCCCCCc
Q 012368 246 KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDD-AGALLVFDEVQCGLGRTGY 297 (465)
Q Consensus 246 ~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~-~g~llI~DEv~~g~gr~g~ 297 (465)
+.+.+-+..+...+|...++.+...--+.+++. .-.++++| ++=||+.+.
T Consensus 166 d~aFig~~gi~~~~g~~~~~~~ea~~k~~~~~~a~~~~ll~D--~sKf~~~~~ 216 (253)
T COG1349 166 DKAFIGADGIDLEGGLTTFNEEEAEVKRAMIEAAREVILLAD--SSKFGRVAP 216 (253)
T ss_pred cEEEEeccccCCCCCcCcCCHHHHHHHHHHHHhhCcEEEEEc--CCccCCcee
Confidence 577777888888888877766555444444443 35688899 455766553
No 464
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=21.52 E-value=1.1e+02 Score=25.34 Aligned_cols=20 Identities=20% Similarity=0.390 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHhCCEEEE
Q 012368 266 KEFLQFLRDACDDAGALLVF 285 (465)
Q Consensus 266 ~~~l~~l~~l~~~~g~llI~ 285 (465)
.++|.++.+.|++.|+-+++
T Consensus 43 ~Dllge~v~a~h~~Girv~a 62 (132)
T PF14871_consen 43 RDLLGEQVEACHERGIRVPA 62 (132)
T ss_pred cCHHHHHHHHHHHCCCEEEE
Confidence 57899999999999998874
No 465
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=21.13 E-value=5.2e+02 Score=27.02 Aligned_cols=44 Identities=18% Similarity=0.237 Sum_probs=25.4
Q ss_pred EEEEcccCCCCCcccCCH-HHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 249 AVFVEPIQGEGGIYSATK-EFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 249 ~vi~ep~~~~~G~~~~~~-~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
.||-+-.-..+|++-+.. +--.+..++|+.+++.|++=.=.+||
T Consensus 327 GiIANqp~~~~G~l~~~sa~KaArFI~~cd~~~iPlv~L~d~pGF 371 (526)
T COG4799 327 GIIANQPRHLGGVLDIDSADKAARFIRLCDAFNIPLVFLVDTPGF 371 (526)
T ss_pred EEEecCccccccccchHHHHHHHHHHHhhhccCCCeEEEeCCCCC
Confidence 444433223456553332 33456669999999987754445565
No 466
>cd01394 radB RadB. The archaeal protein radB shares similarity radA, the archaeal functional homologue to the bacterial RecA. The precise function of radB is unclear.
Probab=20.70 E-value=4.4e+02 Score=23.50 Aligned_cols=45 Identities=18% Similarity=0.108 Sum_probs=26.2
Q ss_pred CeEEEEEcccCCCCCcccCC-----------HHHHHHHHHHHHHhCCEEE-Eecccc
Q 012368 246 KTAAVFVEPIQGEGGIYSAT-----------KEFLQFLRDACDDAGALLV-FDEVQC 290 (465)
Q Consensus 246 ~~a~vi~ep~~~~~G~~~~~-----------~~~l~~l~~l~~~~g~llI-~DEv~~ 290 (465)
....|++|++..-.-..... ...+..|..+|+++++.+| ..++.+
T Consensus 103 ~~~lvvIDsi~~l~~~~~~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vi~t~q~~~ 159 (218)
T cd01394 103 KVDLVVVDSATALYRLELGDDDTTIKNYRELAKQLTFLLWLARKHDVAVVITNQVYS 159 (218)
T ss_pred CCcEEEEechHHhhhHHhcCccchHHHHHHHHHHHHHHHHHHHHhCCEEEEecCCEE
Confidence 47789999975431000001 1223456789999999766 455544
No 467
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=20.60 E-value=2.3e+02 Score=25.76 Aligned_cols=51 Identities=18% Similarity=0.331 Sum_probs=26.8
Q ss_pred CHHHHHhhcCCCCeEEEEEcccCCC-CC--cccCCHHHHHHHHHHHHHhC--CEEEEe
Q 012368 234 NIEATRKLIQPGKTAAVFVEPIQGE-GG--IYSATKEFLQFLRDACDDAG--ALLVFD 286 (465)
Q Consensus 234 d~~~le~~l~~~~~a~vi~ep~~~~-~G--~~~~~~~~l~~l~~l~~~~g--~llI~D 286 (465)
.++.++..+.. +-.|++..+++. +| .++...+.+++++++..++| +.+.+|
T Consensus 118 p~~~i~~~l~~--~D~vlvMtV~PGfgGq~fi~~~lekI~~l~~~~~~~~~~~~I~vd 173 (220)
T PRK08883 118 PLHHLEYIMDK--VDLILLMSVNPGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEID 173 (220)
T ss_pred CHHHHHHHHHh--CCeEEEEEecCCCCCceecHhHHHHHHHHHHHHHhcCCCeeEEEE
Confidence 56777777752 223333444333 34 33334455666666665554 556666
No 468
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=20.52 E-value=2.2e+02 Score=27.24 Aligned_cols=52 Identities=15% Similarity=0.171 Sum_probs=38.1
Q ss_pred HHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Q 012368 235 IEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGL 292 (465)
Q Consensus 235 ~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (465)
.+++++.+.......+.+.|..... .+....+..+.+.|.++|+++++ |+|.
T Consensus 115 ~~E~er~v~~~gf~g~~l~p~~~~~---~~~~~~~~pi~~~a~~~gvpv~i---htG~ 166 (293)
T COG2159 115 AEELERRVRELGFVGVKLHPVAQGF---YPDDPRLYPIYEAAEELGVPVVI---HTGA 166 (293)
T ss_pred HHHHHHHHHhcCceEEEecccccCC---CCCChHHHHHHHHHHHcCCCEEE---EeCC
Confidence 3567777765567888888865432 34555588999999999999998 6665
No 469
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=20.31 E-value=7.9e+02 Score=23.78 Aligned_cols=96 Identities=19% Similarity=0.229 Sum_probs=49.7
Q ss_pred CCceEEEEcC-CcccCccccccccCCCCcCCCCCCCCCCceEe--eCCCHHHHHhhcCCCCeEEEEEcc-cCCCCCcccC
Q 012368 189 PATEFVSFTN-SFHGRTMGALALTSKEHYRSPFEPVMPGVNFV--EYGNIEATRKLIQPGKTAAVFVEP-IQGEGGIYSA 264 (465)
Q Consensus 189 ~~~~ii~~~~-~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~le~~l~~~~~a~vi~ep-~~~~~G~~~~ 264 (465)
+..+|+..+. +|-|.......+... +...|+ +-.|.+.+.++++..++-+|+--. -.+..-.+..
T Consensus 25 ~d~~v~~~DkLTYAgn~~~l~~~~~~-----------~~~~fv~~DI~D~~~v~~~~~~~~~D~VvhfAAESHVDRSI~~ 93 (340)
T COG1088 25 PDDHVVNLDKLTYAGNLENLADVEDS-----------PRYRFVQGDICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDG 93 (340)
T ss_pred CCceEEEEecccccCCHHHHHhhhcC-----------CCceEEeccccCHHHHHHHHHhcCCCeEEEechhccccccccC
Confidence 3455666665 666655443222222 222222 224788888888743444443221 1122222334
Q ss_pred CHHHH-------HHHHHHHHHhCC---E--EEEeccccCCCCC
Q 012368 265 TKEFL-------QFLRDACDDAGA---L--LVFDEVQCGLGRT 295 (465)
Q Consensus 265 ~~~~l-------~~l~~l~~~~g~---l--lI~DEv~~g~gr~ 295 (465)
|..|+ -.|.+.+++|.. + +=.||||..++..
T Consensus 94 P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~ 136 (340)
T COG1088 94 PAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLD 136 (340)
T ss_pred hhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCC
Confidence 44444 256777888874 2 2379999877543
No 470
>PF00549 Ligase_CoA: CoA-ligase; InterPro: IPR005811 This entry represents a domain found in both the alpha and beta chains of succinyl-CoA synthase (6.2.1.4 from EC (GDP-forming) and 6.2.1.5 from EC (ADP-forming)) [, ]. This domain can also be found in ATP citrate synthase (2.3.3.8 from EC) and malate-CoA ligase (6.2.1.9 from EC). Some members of the domain utilise ATP others use GTP.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3DMY_B 3MWE_B 3PFF_A 3MWD_B 2YV1_A 1EUC_A 2FP4_A 1EUD_A 2FPI_A 2FPG_A ....
Probab=20.26 E-value=1.1e+02 Score=26.05 Aligned_cols=40 Identities=18% Similarity=0.072 Sum_probs=25.3
Q ss_pred HHHHHhhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHH
Q 012368 235 IEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDD 278 (465)
Q Consensus 235 ~~~le~~l~~~~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~ 278 (465)
.+.|+...++.++++|+++-+-+-+..-. ...++.+..++
T Consensus 62 ~~~l~~~~~Dp~v~vIlvd~~~G~g~~~~----~A~~l~~a~~~ 101 (153)
T PF00549_consen 62 NEALEIEAADPEVKVILVDIVGGIGSCED----PAAGLIPAIKE 101 (153)
T ss_dssp HHHHHHHHTSTTESEEEEEEESSSSSHHH----HHHHHHHHHSH
T ss_pred HHHHHHHhcCCCccEEEEEeccccCchHH----HHHHHHHHHHh
Confidence 46777777767899999998876554332 24444444433
No 471
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=20.19 E-value=1.7e+02 Score=26.69 Aligned_cols=35 Identities=11% Similarity=0.039 Sum_probs=27.3
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 012368 246 KTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVF 285 (465)
Q Consensus 246 ~~a~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 285 (465)
..+++|||-++.. |.+.. +.++.++|++||+.+|.
T Consensus 168 ~p~~vicEil~~d-G~ma~----~~~l~~fA~~h~l~~is 202 (218)
T PRK00910 168 QPAGVLCELTNPD-GTMAK----TPEIIAFGKLHNMPVLT 202 (218)
T ss_pred CceEEEEEEecCC-CCcCC----HHHHHHHHHHcCCcEEE
Confidence 4689999987765 44444 78889999999998873
Done!