Your job contains 1 sequence.
>012372
MLTCSCRAHFRLDRVDRLLKFTSTYVNSRPLDYSQGGCSYYSLSCDWKMGGARDNQGAVY
GDKKQKIINPVWRPVSTQASVNEESLVKDVSEDGSQIQEMHCSTSSNVSDAQLGVEVAEA
VNEGTDLTLSSSVSLDDIKDETLEGEPVPSAERHSLSVEVGASVIRFIKGKEGSTQKKFE
KEMGVKIILPSSKKEDSIIIEGNSTDSVAKASEKIQAIIAEAVESPSLDYSHFVSLPLAV
HPELVDKLVNFQNTILGITDVCLDENVGSKSNEDASDSEEKEQQVDQEHKVAVELNIGDN
SERVKVDRTSIPIVGYEAKASRPSTSSDLGIDKSIFIKPKTFHLTVLMLKLWNKDRVNAA
TNVLKSISSKVMDALDNRPLFIRLKGLDLMRGSKDKARILYAPVEEIGDGDRLLHACRIL
IAFVSSIFAPLCTSLIIKMKQYYIISLNLIVNFIQWNLLKFLEPS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012372
(465 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2094907 - symbol:AT3G16220 "AT3G16220" species... 311 4.4e-36 2
ZFIN|ZDB-GENE-050417-80 - symbol:ascc1 "activating signal... 122 5.1e-12 2
UNIPROTKB|Q0IIJ9 - symbol:ASCC1 "Uncharacterized protein"... 126 6.2e-12 2
UNIPROTKB|E2RKL0 - symbol:ASCC1 "Uncharacterized protein"... 122 1.8e-11 2
UNIPROTKB|I3L6H8 - symbol:ASCC1 "Uncharacterized protein"... 122 2.8e-11 2
UNIPROTKB|F1NT55 - symbol:ASCC1 "Uncharacterized protein"... 116 4.0e-11 2
UNIPROTKB|I3LBQ6 - symbol:ASCC1 "Uncharacterized protein"... 122 4.5e-11 2
UNIPROTKB|F5H874 - symbol:ASCC1 "Activating signal cointe... 124 1.4e-10 2
MGI|MGI:1916340 - symbol:Ascc1 "activating signal cointeg... 123 1.5e-10 2
RGD|1359255 - symbol:Ascc1 "activating signal cointegrato... 120 2.0e-10 2
UNIPROTKB|H0YCB3 - symbol:ASCC1 "Activating signal cointe... 124 2.1e-10 2
UNIPROTKB|Q8N9N2 - symbol:ASCC1 "Activating signal cointe... 124 3.4e-10 2
UNIPROTKB|J9NUQ6 - symbol:ASCC1 "Uncharacterized protein"... 119 5.2e-05 1
UNIPROTKB|E9PM82 - symbol:ASCC1 "Activating signal cointe... 97 0.00037 1
UNIPROTKB|E9PSA3 - symbol:ASCC1 "Activating signal cointe... 86 0.00062 2
>TAIR|locus:2094907 [details] [associations]
symbol:AT3G16220 "AT3G16220" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR009210
PIRSF:PIRSF027019 GO:GO:0005737 EMBL:CP002686 GO:GO:0006355
InterPro:IPR019510 Pfam:PF10469 EMBL:BT012638 IPI:IPI00536656
RefSeq:NP_188243.2 UniGene:At.38926 ProteinModelPortal:Q6NKQ6
PRIDE:Q6NKQ6 EnsemblPlants:AT3G16220.1 GeneID:820868
KEGG:ath:AT3G16220 TAIR:At3g16220 HOGENOM:HOG000030367
InParanoid:Q6NKQ6 OMA:REAHISQ PhylomeDB:Q6NKQ6 ProtClustDB:PLN00108
Genevestigator:Q6NKQ6 Uniprot:Q6NKQ6
Length = 257
Score = 311 (114.5 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 64/107 (59%), Positives = 82/107 (76%)
Query: 324 STSSDLGIDKSIFIKPKTFHLTVLMLKLWNKDRVNAATNVLKSISSKVMDALDNRPLFIR 383
ST +++GI+KSIF+ PKTFHLTV+MLKL N + V A N+L+SI S V AL NRP+FIR
Sbjct: 74 STLAEMGIEKSIFVTPKTFHLTVVMLKLENNESVVKAQNILQSIFSNVRQALKNRPVFIR 133
Query: 384 LKGLDLMRGSKDKARILYAPVEEIGDGDRLLHACRILI-AFVSSIFA 429
L+GL+ M GS DK R+LYAPVEE+G RLL+AC ++I AF + FA
Sbjct: 134 LRGLECMSGSLDKTRVLYAPVEEVGREGRLLNACHVIIDAFENVGFA 180
Score = 94 (38.1 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 230 YSHFVSLPLAVHPELVDKLVNFQNTILGITD 260
++HFVSLPLA++P+L + FQN++LG D
Sbjct: 36 FTHFVSLPLAIYPDLTKNIEAFQNSVLGNND 66
>ZFIN|ZDB-GENE-050417-80 [details] [associations]
symbol:ascc1 "activating signal cointegrator 1
complex subunit 1" species:7955 "Danio rerio" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR009210 Pfam:PF00013 PIRSF:PIRSF027019 PROSITE:PS50084
SMART:SM00322 ZFIN:ZDB-GENE-050417-80 GO:GO:0005737 GO:GO:0006355
GO:GO:0003723 InterPro:IPR019510 Pfam:PF10469 CTD:51008
HOGENOM:HOG000261687 HOVERGEN:HBG050588 EMBL:BC093287
IPI:IPI00570081 RefSeq:NP_001017610.1 UniGene:Dr.85122
ProteinModelPortal:Q566X5 DNASU:550273 GeneID:550273
KEGG:dre:550273 NextBio:20879535 Uniprot:Q566X5
Length = 353
Score = 122 (48.0 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 33/103 (32%), Positives = 49/103 (47%)
Query: 326 SSDLGIDKSIFIKPKTFHLTVLMLKLWNKDRVNAATNVLKSISSKVMDALDNRPLFIRLK 385
S D G+D SIF P HLT+ L L N+ V A +L + + L + ++
Sbjct: 163 SQDSGVDVSIFQNPDKLHLTIGTLVLLNQQEVTRANELLHQCQDTIREITGAEALPVEVR 222
Query: 386 GLDLMRGSKDKARILYAPVEEIGDG-DRLLHAC-RILIAFVSS 426
G++ M +LYA V + DG DRL R++ FVS+
Sbjct: 223 GVEYMNDDPSMVDVLYAKVS-VQDGSDRLQQISDRLVECFVSA 264
Score = 113 (44.8 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 28/118 (23%), Positives = 60/118 (50%)
Query: 140 DETLEGEPVPSAER-HSLSVEVGASVIRFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSI 198
DE + + +R +++V + + ++I GK+G T+++ E E I +P E I
Sbjct: 45 DEPCDAHNIEQTDRGFRCALDVPSVLYKYIIGKKGETRRRLESETKTSINIPKQGVEGQI 104
Query: 199 IIEGNSTDSVAKASEKIQAIIAEAVESPSLDYSHFVSLPLAVHPELVDKLVNFQNTIL 256
++ G SV+ A +I+ +I ++ ++HF+S L H ++ + + F+ +L
Sbjct: 105 VVTGAHRPSVSSAVTRIEVLI-DSFRRKQ-PFTHFLSFALN-HAQVREGFLRFREEVL 159
>UNIPROTKB|Q0IIJ9 [details] [associations]
symbol:ASCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR009210 Pfam:PF00013 PIRSF:PIRSF027019 PROSITE:PS50084
SMART:SM00322 GO:GO:0005737 GO:GO:0006355 GO:GO:0003723
GO:GO:0005667 InterPro:IPR019510 Pfam:PF10469 CTD:51008
eggNOG:NOG237734 HOGENOM:HOG000261687 HOVERGEN:HBG050588
GeneTree:ENSGT00390000018119 OMA:RCKEEFI OrthoDB:EOG4KH2VG
EMBL:DAAA02061868 EMBL:BC122605 IPI:IPI00698794
RefSeq:NP_001069509.1 UniGene:Bt.62878 Ensembl:ENSBTAT00000000504
GeneID:534915 KEGG:bta:534915 InParanoid:Q0IIJ9 NextBio:20876569
Uniprot:Q0IIJ9
Length = 357
Score = 126 (49.4 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 32/104 (30%), Positives = 51/104 (49%)
Query: 326 SSDLGIDKSIFIKPKTFHLTVLMLKLWNKDRVNAATNVLKSISSKVMDALDN-RPLFIRL 384
S D G+D SIF PK HLT+ ML L ++ + +L+ + +D + +PL + +
Sbjct: 162 SMDHGVDSSIFQNPKKLHLTIGMLVLLSEQEIQQTCEMLQQCKEEFIDDISGGKPLEVEM 221
Query: 385 KGLDLMRGSKDKARILYAPVEEIGDGDRLLHAC--RILIAFVSS 426
G++ M +LYA V + DG L R+L F +S
Sbjct: 222 SGIEYMNDDPGMVDVLYAKVH-MKDGSNRLQELVDRVLERFQAS 264
Score = 108 (43.1 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 35/130 (26%), Positives = 58/130 (44%)
Query: 141 ETLEGEPVPSAERHSLSVEVGASVIRFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSIII 200
ET E P R +V+ + + + I GK G T+KK E E I +P +E I+I
Sbjct: 48 ETYEVVQTPQGFR--CTVKAPSLLYKHIVGKRGDTRKKLEVETKTSISIPKPGQEGEIVI 105
Query: 201 EGNSTDSVAKASEKIQAIIAEAVESPSLDYSHFVSLPLAVHPELVDKLVNFQNTILGITD 260
G V A +I ++ ++HF++ L E+ ++ + FQ +L +
Sbjct: 106 TGQHRSGVVSARTRIDVLLLTFRRKQP--FTHFLAFFLN-EAEVQERFLKFQEEVL---E 159
Query: 261 VC-LDENVGS 269
C +D V S
Sbjct: 160 KCSMDHGVDS 169
>UNIPROTKB|E2RKL0 [details] [associations]
symbol:ASCC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR009210 Pfam:PF00013
PIRSF:PIRSF027019 PROSITE:PS50084 SMART:SM00322 GO:GO:0005737
GO:GO:0006355 GO:GO:0003723 GO:GO:0005667 InterPro:IPR019510
Pfam:PF10469 GeneTree:ENSGT00390000018119 OMA:RCKEEFI
EMBL:AAEX03002823 EMBL:AAEX03002822 Ensembl:ENSCAFT00000022904
Uniprot:E2RKL0
Length = 357
Score = 122 (48.0 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 31/104 (29%), Positives = 51/104 (49%)
Query: 326 SSDLGIDKSIFIKPKTFHLTVLMLKLWNKDRVNAATNVLKSISSKVMDALDN-RPLFIRL 384
S D G+D +IF PK HLT+ ML L ++ + +L+ + +D + +PL + +
Sbjct: 162 SMDHGVDSTIFQNPKKLHLTIGMLVLLSEQEIQQTCEMLQQCKEEFIDDISGGKPLEVEM 221
Query: 385 KGLDLMRGSKDKARILYAPVEEIGDGDRLLHAC--RILIAFVSS 426
G++ M +LYA V + DG L R+L F +S
Sbjct: 222 AGIEYMNDDPGMVDVLYAKVH-MKDGSNRLQELVDRVLERFQAS 264
Score = 108 (43.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 146 EPVPSAERHSLSVEVGASVIRFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSIIIEGNST 205
E V + + +V+ + + R I GK G T+KK E E I +P +E I+I G
Sbjct: 51 EVVQTQQGFRCTVKAPSLLYRHIVGKRGDTRKKLEVETKTSISIPKPGQEGEIVITGQHR 110
Query: 206 DSVAKASEKIQAIIAEAVESPSLDYSHFVSLPLAVHPELVDKLVNFQNTILGITDVC-LD 264
V A +I ++ ++HF++ L E+ ++ + FQ +L + C +D
Sbjct: 111 SGVISARTRIDVLLLTFRRKQP--FTHFLAFFLN-EAEVQERFLKFQEEVL---EKCSMD 164
Query: 265 ENVGS 269
V S
Sbjct: 165 HGVDS 169
>UNIPROTKB|I3L6H8 [details] [associations]
symbol:ASCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR009210 Pfam:PF00013 PIRSF:PIRSF027019 PROSITE:PS50084
SMART:SM00322 GO:GO:0005737 GO:GO:0006355 GO:GO:0003723
InterPro:IPR019510 Pfam:PF10469 CTD:51008
GeneTree:ENSGT00390000018119 OMA:RCKEEFI EMBL:FP565279
RefSeq:NP_001231012.1 UniGene:Ssc.55553 UniGene:Ssc.71596
Ensembl:ENSSSCT00000022544 GeneID:100512075 KEGG:ssc:100512075
Uniprot:I3L6H8
Length = 357
Score = 122 (48.0 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 31/104 (29%), Positives = 51/104 (49%)
Query: 326 SSDLGIDKSIFIKPKTFHLTVLMLKLWNKDRVNAATNVLKSISSKVMDALDN-RPLFIRL 384
S D G+D +IF PK HLT+ ML L ++ + +L+ + +D + +PL + +
Sbjct: 162 SMDHGVDSTIFQNPKKLHLTIGMLVLLSEQEIQQTCEMLQQCKEEFIDDISGGKPLEVEM 221
Query: 385 KGLDLMRGSKDKARILYAPVEEIGDGDRLLHAC--RILIAFVSS 426
G++ M +LYA V + DG L R+L F +S
Sbjct: 222 AGIEYMNDDPGMVDVLYAKVH-MKDGSNRLQELVDRVLERFQAS 264
Score = 106 (42.4 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 34/132 (25%), Positives = 60/132 (45%)
Query: 140 DETLEG-EPVPSAERHSLSVEVGASVIRFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSI 198
+E E E V + + +V+ + + + I GK G T+KK E E I +P +E I
Sbjct: 44 EEPCEAYEVVQTPQGFRCTVKAPSLLYKHIVGKRGDTRKKLEVETKTSITIPKPGQEGEI 103
Query: 199 IIEGNSTDSVAKASEKIQAIIAEAVESPSLDYSHFVSLPLAVHPELVDKLVNFQNTILGI 258
+I G V A +I ++ ++HF++ L E+ ++ + FQ +L
Sbjct: 104 VITGQHRSGVISARTRIDVLLLTFRRKQP--FTHFLAFFLN-EVEVQERFLKFQEEVL-- 158
Query: 259 TDVC-LDENVGS 269
+ C +D V S
Sbjct: 159 -EKCSMDHGVDS 169
>UNIPROTKB|F1NT55 [details] [associations]
symbol:ASCC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR009210 Pfam:PF00013 PIRSF:PIRSF027019 PROSITE:PS50084
SMART:SM00322 GO:GO:0005737 GO:GO:0006355 GO:GO:0003723
InterPro:IPR019510 Pfam:PF10469 GeneTree:ENSGT00390000000046
EMBL:AADN02027972 EMBL:AADN02027973 EMBL:AADN02027983
EMBL:AADN02027974 EMBL:AADN02027975 EMBL:AADN02027976
EMBL:AADN02027977 EMBL:AADN02027978 EMBL:AADN02027979
EMBL:AADN02027980 EMBL:AADN02027981 EMBL:AADN02027982
IPI:IPI00596838 Ensembl:ENSGALT00000007036 ArrayExpress:F1NT55
Uniprot:F1NT55
Length = 354
Score = 116 (45.9 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 31/118 (26%), Positives = 56/118 (47%)
Query: 140 DETLEGEPVPSAER-HSLSVEVGASVIRFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSI 198
DE + V ++ VEV + + ++I GK+G T+K+ E E I +P E I
Sbjct: 41 DEPCDAFVVEETDKGFQCRVEVPSPLYKYIIGKKGETKKRIETETRTSISIPKPGLEGEI 100
Query: 199 IIEGNSTDSVAKASEKIQAIIAEAVESPSLDYSHFVSLPLAVHPELVDKLVNFQNTIL 256
+I G V A +I ++ ++ ++HF+S L P + +K + F+ +L
Sbjct: 101 VITGQQRGGVISARTRIDVLL-DSFRKKQ-PFTHFLSFALN-QPVVQEKFLQFKEEVL 155
Score = 111 (44.1 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 326 SSDLGIDKSIFIKPKTFHLTVLMLKLWNKDRVNAATNVLKSISSKVMDALDN-RPLFIRL 384
S D G+ S+F P HLT+ L L N+ + A ++L+ +D + +PL + +
Sbjct: 159 SQDHGVSSSLFQNPAKLHLTLGTLVLLNEQEIQRACDLLQQCKEDFVDQITGGKPLSVEV 218
Query: 385 KGLDLMRGSKDKARILYAPVEEIGDGDRL-LHACRILIAFVSS 426
G++ M +LYA V D+L + A +++ FV+S
Sbjct: 219 AGVEYMNDDPAMMDVLYAKVHMKDGSDKLQVIADQLVEKFVAS 261
>UNIPROTKB|I3LBQ6 [details] [associations]
symbol:ASCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR009210 Pfam:PF00013 PIRSF:PIRSF027019 PROSITE:PS50084
SMART:SM00322 GO:GO:0005737 GO:GO:0006355 GO:GO:0003723
InterPro:IPR019510 Pfam:PF10469 CTD:51008
GeneTree:ENSGT00390000018119 EMBL:FP565279 UniGene:Ssc.55553
UniGene:Ssc.71596 GeneID:100512075 KEGG:ssc:100512075
RefSeq:NP_001231013.1 Ensembl:ENSSSCT00000030401 Uniprot:I3LBQ6
Length = 407
Score = 122 (48.0 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 31/104 (29%), Positives = 51/104 (49%)
Query: 326 SSDLGIDKSIFIKPKTFHLTVLMLKLWNKDRVNAATNVLKSISSKVMDALDN-RPLFIRL 384
S D G+D +IF PK HLT+ ML L ++ + +L+ + +D + +PL + +
Sbjct: 162 SMDHGVDSTIFQNPKKLHLTIGMLVLLSEQEIQQTCEMLQQCKEEFIDDISGGKPLEVEM 221
Query: 385 KGLDLMRGSKDKARILYAPVEEIGDGDRLLHAC--RILIAFVSS 426
G++ M +LYA V + DG L R+L F +S
Sbjct: 222 AGIEYMNDDPGMVDVLYAKVH-MKDGSNRLQELVDRVLERFQAS 264
Score = 106 (42.4 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 34/132 (25%), Positives = 60/132 (45%)
Query: 140 DETLEG-EPVPSAERHSLSVEVGASVIRFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSI 198
+E E E V + + +V+ + + + I GK G T+KK E E I +P +E I
Sbjct: 44 EEPCEAYEVVQTPQGFRCTVKAPSLLYKHIVGKRGDTRKKLEVETKTSITIPKPGQEGEI 103
Query: 199 IIEGNSTDSVAKASEKIQAIIAEAVESPSLDYSHFVSLPLAVHPELVDKLVNFQNTILGI 258
+I G V A +I ++ ++HF++ L E+ ++ + FQ +L
Sbjct: 104 VITGQHRSGVISARTRIDVLLLTFRRKQP--FTHFLAFFLN-EVEVQERFLKFQEEVL-- 158
Query: 259 TDVC-LDENVGS 269
+ C +D V S
Sbjct: 159 -EKCSMDHGVDS 169
>UNIPROTKB|F5H874 [details] [associations]
symbol:ASCC1 "Activating signal cointegrator 1 complex
subunit 1" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR009210
Pfam:PF00013 PIRSF:PIRSF027019 PROSITE:PS50084 SMART:SM00322
GO:GO:0005737 GO:GO:0006355 GO:GO:0003723 InterPro:IPR019510
Pfam:PF10469 EMBL:AL607035 EMBL:AC022392 HGNC:HGNC:24268
IPI:IPI00434390 ProteinModelPortal:F5H874 SMR:F5H874
Ensembl:ENST00000545550 UCSC:uc010qju.2 OMA:IATIIDE
ArrayExpress:F5H874 Bgee:F5H874 Uniprot:F5H874
Length = 379
Score = 124 (48.7 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 32/104 (30%), Positives = 51/104 (49%)
Query: 326 SSDLGIDKSIFIKPKTFHLTVLMLKLWNKDRVNAATNVLKSISSK-VMDALDNRPLFIRL 384
S D G+D SIF PK HLT+ ML L +++ + +L+ + + D +PL + +
Sbjct: 184 SMDHGVDSSIFQNPKKLHLTIGMLVLLSEEEIQQTCEMLQQCKEEFINDISGGKPLEVEM 243
Query: 385 KGLDLMRGSKDKARILYAPVEEIGDGDRLLHAC--RILIAFVSS 426
G++ M +LYA V + DG L R+L F +S
Sbjct: 244 AGIEYMNDDPGMVDVLYAKVH-MKDGSNRLQELVDRVLERFQAS 286
Score = 98 (39.6 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 32/129 (24%), Positives = 56/129 (43%)
Query: 141 ETLEGEPVPSAERHSLSVEVGASVIRFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSIII 200
+ E E P R +L + + + I GK G T+KK E E I +P ++ I+I
Sbjct: 70 DAYEVEQTPQGFRSTLRAP--SLLYKHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVI 127
Query: 201 EGNSTDSVAKASEKIQAIIAEAVESPSLDYSHFVSLPLAVHPELVDKLVNFQNTILGITD 260
G + V A +I ++ + ++HF++ L E+ + + FQ +L
Sbjct: 128 TGQHRNGVISARTRIDVLL-DTFRRKQ-PFTHFLAFFLN-EVEVQEGFLRFQEEVLA--K 182
Query: 261 VCLDENVGS 269
+D V S
Sbjct: 183 CSMDHGVDS 191
>MGI|MGI:1916340 [details] [associations]
symbol:Ascc1 "activating signal cointegrator 1 complex
subunit 1" species:10090 "Mus musculus" [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR009210
Pfam:PF00013 PIRSF:PIRSF027019 PROSITE:PS50084 SMART:SM00322
MGI:MGI:1916340 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0003723 GO:GO:0005667 InterPro:IPR019510 Pfam:PF10469
CTD:51008 eggNOG:NOG237734 HOGENOM:HOG000261687 HOVERGEN:HBG050588
EMBL:AK007519 EMBL:AK139944 EMBL:AK171958 EMBL:BC030905
IPI:IPI00112275 RefSeq:NP_001186116.1 RefSeq:NP_081213.1
UniGene:Mm.155839 ProteinModelPortal:Q9D8Z1 SMR:Q9D8Z1
PhosphoSite:Q9D8Z1 PaxDb:Q9D8Z1 PRIDE:Q9D8Z1
Ensembl:ENSMUST00000050516 Ensembl:ENSMUST00000164083 GeneID:69090
KEGG:mmu:69090 UCSC:uc007feh.2 GeneTree:ENSGT00390000018119
InParanoid:Q9D8Z1 OMA:RCKEEFI OrthoDB:EOG4KH2VG ChiTaRS:ASCC1
NextBio:328580 Bgee:Q9D8Z1 Genevestigator:Q9D8Z1
GermOnline:ENSMUSG00000044475 Uniprot:Q9D8Z1
Length = 356
Score = 123 (48.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 326 SSDLGIDKSIFIKPKTFHLTVLMLKLWNKDRVNAATNVLKSISSK-VMDALDNRPLFIRL 384
S D G+D +IF PK HLT+ ML L ++ + +L+ + + D RPL + +
Sbjct: 161 SKDRGVDSTIFQNPKKLHLTIGMLVLLSEQEIQQTCEILQRCKEEFINDISGGRPLEVEM 220
Query: 385 KGLDLMRGSKDKARILYAPVEEIGDGDRLLHAC--RILIAFVS 425
G++ M +LYA V + DG L R+L F S
Sbjct: 221 AGIEYMNDDPAMVDVLYAKVH-MKDGSNRLQELVDRVLERFQS 262
Score = 98 (39.6 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 30/105 (28%), Positives = 49/105 (46%)
Query: 154 HSLSVEVGA-SVI-RFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSIIIEGNSTDSVAKA 211
H V A S++ + I GK G T+KK E E I +P E I+I G + V A
Sbjct: 56 HGFRATVSAPSLLYKHIVGKRGDTKKKIEVETKTSINIPKHGHEGEIVITGQHRNGVVSA 115
Query: 212 SEKIQAIIAEAVESPSLDYSHFVSLPLAVHPELVDKLVNFQNTIL 256
+I ++ + ++HF+S L E+ ++ + FQ +L
Sbjct: 116 RTRIDVLL-DTFRRRQ-PFTHFLSFFLN-EVEVQERFLMFQEEVL 157
>RGD|1359255 [details] [associations]
symbol:Ascc1 "activating signal cointegrator 1 complex subunit
1" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005667 "transcription factor complex" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR009210 Pfam:PF00013
PIRSF:PIRSF027019 PROSITE:PS50084 SMART:SM00322 RGD:1359255
GO:GO:0005737 GO:GO:0006355 GO:GO:0003723 InterPro:IPR019510
Pfam:PF10469 CTD:51008 GeneTree:ENSGT00390000018119 OMA:RCKEEFI
EMBL:CH474016 RefSeq:NP_001007633.1 UniGene:Rn.16141
Ensembl:ENSRNOT00000000701 GeneID:294512 KEGG:rno:294512
NextBio:638237 Uniprot:G3V619
Length = 356
Score = 120 (47.3 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 31/103 (30%), Positives = 49/103 (47%)
Query: 326 SSDLGIDKSIFIKPKTFHLTVLMLKLWNKDRVNAATNVLKSISSK-VMDALDNRPLFIRL 384
S D G+D +IF PK HLT+ ML L ++ + +L+ + + D +PL + +
Sbjct: 161 SKDRGVDSTIFQNPKKLHLTIGMLVLLSEQEIQQTCEILQRCKEEFINDISGGKPLEVEM 220
Query: 385 KGLDLMRGSKDKARILYAPVEEIGDGDRLLHAC--RILIAFVS 425
G++ M +LYA V + DG L R+L F S
Sbjct: 221 AGIEYMNDDPAMVDVLYAKVH-MKDGSNRLQELVDRVLERFQS 262
Score = 100 (40.3 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 31/113 (27%), Positives = 53/113 (46%)
Query: 144 EGEPVPSAERHSLSVEVGASVIRFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSIIIEGN 203
E E P R ++S + + + I GK G T+KK E E I +P E I+I G+
Sbjct: 50 EVEQTPHGFRATVSAP--SLLYKHIVGKRGDTKKKIEVETKTSINIPKLGHEGEIVITGH 107
Query: 204 STDSVAKASEKIQAIIAEAVESPSLDYSHFVSLPLAVHPELVDKLVNFQNTIL 256
+ V A +I ++ + ++HF+S L E+ ++ + FQ +L
Sbjct: 108 HRNGVVSARTRIDVLL-DTFRRRQ-PFTHFLSFFLN-EVEVQERFLEFQAEVL 157
>UNIPROTKB|H0YCB3 [details] [associations]
symbol:ASCC1 "Activating signal cointegrator 1 complex
subunit 1" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR004088 InterPro:IPR009210 Pfam:PF13014
PIRSF:PIRSF027019 PROSITE:PS50084 GO:GO:0005737 GO:GO:0006355
GO:GO:0003723 InterPro:IPR019510 Pfam:PF10469 EMBL:AL607035
EMBL:AC022392 HGNC:HGNC:24268 Ensembl:ENST00000486689
Uniprot:H0YCB3
Length = 292
Score = 124 (48.7 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 32/104 (30%), Positives = 51/104 (49%)
Query: 326 SSDLGIDKSIFIKPKTFHLTVLMLKLWNKDRVNAATNVLKSISSK-VMDALDNRPLFIRL 384
S D G+D SIF PK HLT+ ML L +++ + +L+ + + D +PL + +
Sbjct: 94 SMDHGVDSSIFQNPKKLHLTIGMLVLLSEEEIQQTCEMLQQCKEEFINDISGGKPLEVEM 153
Query: 385 KGLDLMRGSKDKARILYAPVEEIGDGDRLLHAC--RILIAFVSS 426
G++ M +LYA V + DG L R+L F +S
Sbjct: 154 AGIEYMNDDPGMVDVLYAKVH-MKDGSNRLQELVDRVLERFQAS 196
Score = 92 (37.4 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 27/104 (25%), Positives = 47/104 (45%)
Query: 166 RFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSIIIEGNSTDSVAKASEKIQAIIAEAVES 225
+ I GK G T+KK E E I +P ++ I+I G + V A +I ++ +
Sbjct: 3 KHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVITGQHRNGVISARTRIDVLL-DTFRR 61
Query: 226 PSLDYSHFVSLPLAVHPELVDKLVNFQNTILGITDVCLDENVGS 269
++HF++ L E+ + + FQ +L +D V S
Sbjct: 62 KQ-PFTHFLAFFLN-EVEVQEGFLRFQEEVLA--KCSMDHGVDS 101
>UNIPROTKB|Q8N9N2 [details] [associations]
symbol:ASCC1 "Activating signal cointegrator 1 complex
subunit 1" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR009210
Pfam:PF00013 PIRSF:PIRSF027019 PROSITE:PS50084 SMART:SM00322
GO:GO:0005737 GO:GO:0006355 EMBL:CH471083 GO:GO:0006351
GO:GO:0003723 GO:GO:0005667 InterPro:IPR019510 Pfam:PF10469
EMBL:AL607035 EMBL:AY013290 EMBL:AF132952 EMBL:AK094170
EMBL:AK023436 EMBL:AC022392 EMBL:BC012291 IPI:IPI00434389
IPI:IPI01013403 RefSeq:NP_001185727.1 RefSeq:NP_001185728.1
RefSeq:NP_001185729.1 UniGene:Hs.500007 ProteinModelPortal:Q8N9N2
SMR:Q8N9N2 STRING:Q8N9N2 PhosphoSite:Q8N9N2 DMDM:50400556
PaxDb:Q8N9N2 PRIDE:Q8N9N2 DNASU:51008 Ensembl:ENST00000317126
Ensembl:ENST00000317168 Ensembl:ENST00000342444
Ensembl:ENST00000373101 Ensembl:ENST00000394915
Ensembl:ENST00000394919 GeneID:51008 KEGG:hsa:51008 UCSC:uc001jss.2
UCSC:uc001jst.2 CTD:51008 GeneCards:GC10M073856 HGNC:HGNC:24268
HPA:HPA038038 MIM:614215 MIM:614266 neXtProt:NX_Q8N9N2
Orphanet:1232 PharmGKB:PA134974899 eggNOG:NOG237734
HOGENOM:HOG000261687 HOVERGEN:HBG050588 InParanoid:Q8N9N2
GenomeRNAi:51008 NextBio:53486 ArrayExpress:Q8N9N2 Bgee:Q8N9N2
CleanEx:HS_ASCC1 Genevestigator:Q8N9N2 GermOnline:ENSG00000138303
Uniprot:Q8N9N2
Length = 400
Score = 124 (48.7 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 32/104 (30%), Positives = 51/104 (49%)
Query: 326 SSDLGIDKSIFIKPKTFHLTVLMLKLWNKDRVNAATNVLKSISSK-VMDALDNRPLFIRL 384
S D G+D SIF PK HLT+ ML L +++ + +L+ + + D +PL + +
Sbjct: 190 SMDHGVDSSIFQNPKKLHLTIGMLVLLSEEEIQQTCEMLQQCKEEFINDISGGKPLEVEM 249
Query: 385 KGLDLMRGSKDKARILYAPVEEIGDGDRLLHAC--RILIAFVSS 426
G++ M +LYA V + DG L R+L F +S
Sbjct: 250 AGIEYMNDDPGMVDVLYAKVH-MKDGSNRLQELVDRVLERFQAS 292
Score = 95 (38.5 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 28/104 (26%), Positives = 47/104 (45%)
Query: 166 RFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSIIIEGNSTDSVAKASEKIQAIIAEAVES 225
R I GK G T+KK E E I +P ++ I+I G + V A +I ++ +
Sbjct: 99 RHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVITGQHRNGVISARTRIDVLL-DTFRR 157
Query: 226 PSLDYSHFVSLPLAVHPELVDKLVNFQNTILGITDVCLDENVGS 269
++HF++ L E+ + + FQ +L +D V S
Sbjct: 158 KQ-PFTHFLAFFLN-EVEVQEGFLRFQEEVLA--KCSMDHGVDS 197
>UNIPROTKB|J9NUQ6 [details] [associations]
symbol:ASCC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR009210 PIRSF:PIRSF027019 GO:GO:0005737 GO:GO:0006355
InterPro:IPR019510 Pfam:PF10469 GeneTree:ENSGT00390000018119
EMBL:AAEX03002823 EMBL:AAEX03002822 Ensembl:ENSCAFT00000044146
Uniprot:J9NUQ6
Length = 195
Score = 119 (46.9 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 30/102 (29%), Positives = 50/102 (49%)
Query: 328 DLGIDKSIFIKPKTFHLTVLMLKLWNKDRVNAATNVLKSISSKVMDALDN-RPLFIRLKG 386
D G+D +IF PK HLT+ ML L ++ + +L+ + +D + +PL + + G
Sbjct: 2 DHGVDSTIFQNPKKLHLTIGMLVLLSEQEIQQTCEMLQQCKEEFIDDISGGKPLEVEMAG 61
Query: 387 LDLMRGSKDKARILYAPVEEIGDGDRLLHAC--RILIAFVSS 426
++ M +LYA V + DG L R+L F +S
Sbjct: 62 IEYMNDDPGMVDVLYAKVH-MKDGSNRLQELVDRVLERFQAS 102
>UNIPROTKB|E9PM82 [details] [associations]
symbol:ASCC1 "Activating signal cointegrator 1 complex
subunit 1" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0003723 EMBL:AL607035
EMBL:AC022392 HGNC:HGNC:24268 IPI:IPI00983035
ProteinModelPortal:E9PM82 SMR:E9PM82 Ensembl:ENST00000530461
ArrayExpress:E9PM82 Bgee:E9PM82 Uniprot:E9PM82
Length = 124
Score = 97 (39.2 bits), Expect = 0.00037, P = 0.00037
Identities = 29/116 (25%), Positives = 52/116 (44%)
Query: 141 ETLEGEPVPSAERHSLSVEVGASVIRFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSIII 200
+ E E P R +L + + + I GK G T+KK E E I +P ++ I+I
Sbjct: 9 DAYEVEQTPQGFRSTLRAP--SLLYKHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVI 66
Query: 201 EGNSTDSVAKASEKIQAIIAEAVESPSLDYSHFVSLPLAVHPELVDKLVNFQNTIL 256
G + V A +I ++ + ++HF++ L E+ + + FQ +L
Sbjct: 67 TGQHRNGVISARTRIDVLL-DTFRRKQ-PFTHFLAFFLN-EVEVQEGFLRFQEEVL 119
>UNIPROTKB|E9PSA3 [details] [associations]
symbol:ASCC1 "Activating signal cointegrator 1 complex
subunit 1" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR009210 PIRSF:PIRSF027019
GO:GO:0005737 GO:GO:0006355 InterPro:IPR019510 Pfam:PF10469
EMBL:AL607035 EMBL:AC022392 HGNC:HGNC:24268 IPI:IPI00980206
ProteinModelPortal:E9PSA3 SMR:E9PSA3 Ensembl:ENST00000530431
ArrayExpress:E9PSA3 Bgee:E9PSA3 Uniprot:E9PSA3
Length = 134
Score = 86 (35.3 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 326 SSDLGIDKSIFIKPKTFHLTVLMLKLWNKDRVNAATNVLKSISSK-VMDALDNRPL 380
S D G+D SIF PK HLT+ ML L +++ + +L+ + + D +PL
Sbjct: 77 SMDHGVDSSIFQNPKKLHLTIGMLVLLSEEEIQQTCEMLQQCKEEFINDISGGKPL 132
Score = 52 (23.4 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 19/88 (21%), Positives = 37/88 (42%)
Query: 182 EMGVKIILPSSKKEDSIIIEGNSTDSVAKASEKIQAIIAEAVESPSLDYSHFVSLPLAVH 241
E I +P ++ I+I G + V A +I ++ + ++HF++ L
Sbjct: 2 ETKTSISIPKPGQDGEIVITGQHRNGVISARTRIDVLL-DTFRRKQ-PFTHFLAFFLN-E 58
Query: 242 PELVDKLVNFQNTILGITDVCLDENVGS 269
E+ + + FQ +L +D V S
Sbjct: 59 VEVQEGFLRFQEEVLA--KCSMDHGVDS 84
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.132 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 465 452 0.00093 118 3 11 23 0.43 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 617 (66 KB)
Total size of DFA: 251 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.80u 0.09s 45.89t Elapsed: 00:00:04
Total cpu time: 45.81u 0.09s 45.90t Elapsed: 00:00:04
Start: Fri May 10 08:45:26 2013 End: Fri May 10 08:45:30 2013