BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012372
(465 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8N9N2|ASCC1_HUMAN Activating signal cointegrator 1 complex subunit 1 OS=Homo sapiens
GN=ASCC1 PE=1 SV=1
Length = 400
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 326 SSDLGIDKSIFIKPKTFHLTVLMLKLWNKDRVNAATNVLKSISSKVM-DALDNRPLFIRL 384
S D G+D SIF PK HLT+ ML L +++ + +L+ + + D +PL + +
Sbjct: 190 SMDHGVDSSIFQNPKKLHLTIGMLVLLSEEEIQQTCEMLQQCKEEFINDISGGKPLEVEM 249
Query: 385 KGLDLMRGSKDKARILYAPVEEIGDGDRLLHAC--RILIAFVSS 426
G++ M +LYA V + DG L R+L F +S
Sbjct: 250 AGIEYMNDDPGMVDVLYAKV-HMKDGSNRLQELVDRVLERFQAS 292
Score = 39.3 bits (90), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 166 RFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSIIIEGNSTDSVAKASEKIQAIIAEAVES 225
R I GK G T+KK E E I +P ++ I+I G + V A +I ++
Sbjct: 99 RHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVITGQHRNGVISARTRIDVLLDTFRRK 158
Query: 226 PSLDYSHFVSLPLAVHPELVDKLVNFQNTILG 257
++HF++ L E+ + + FQ +L
Sbjct: 159 QP--FTHFLAFFLN-EVEVQEGFLRFQEEVLA 187
>sp|Q9D8Z1|ASCC1_MOUSE Activating signal cointegrator 1 complex subunit 1 OS=Mus musculus
GN=Ascc1 PE=2 SV=1
Length = 356
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 326 SSDLGIDKSIFIKPKTFHLTVLMLKLWNKDRVNAATNVLKSISSKVM-DALDNRPLFIRL 384
S D G+D +IF PK HLT+ ML L ++ + +L+ + + D RPL + +
Sbjct: 161 SKDRGVDSTIFQNPKKLHLTIGMLVLLSEQEIQQTCEILQRCKEEFINDISGGRPLEVEM 220
Query: 385 KGLDLMRGSKDKARILYAPVEEIGDGDRLLHAC--RILIAFVS 425
G++ M +LYA V + DG L R+L F S
Sbjct: 221 AGIEYMNDDPAMVDVLYAKV-HMKDGSNRLQELVDRVLERFQS 262
Score = 40.8 bits (94), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 5/105 (4%)
Query: 154 HSLSVEVGAS--VIRFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSIIIEGNSTDSVAKA 211
H V A + + I GK G T+KK E E I +P E I+I G + V A
Sbjct: 56 HGFRATVSAPSLLYKHIVGKRGDTKKKIEVETKTSINIPKHGHEGEIVITGQHRNGVVSA 115
Query: 212 SEKIQAIIAEAVESPSLDYSHFVSLPLAVHPELVDKLVNFQNTIL 256
+I ++ ++HF+S L E+ ++ + FQ +L
Sbjct: 116 RTRIDVLLDTFRRRQP--FTHFLSFFLN-EVEVQERFLMFQEEVL 157
>sp|Q473U7|PNP_CUPPJ Polyribonucleotide nucleotidyltransferase OS=Cupriavidus
pinatubonensis (strain JMP134 / LMG 1197) GN=pnp PE=3
SV=1
Length = 728
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 165 IRFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSIIIEGNSTDSVAKASEKIQAIIAEA 222
IR + GK GST + KE G I + +++ +I I STD +A+A +I+ I AEA
Sbjct: 567 IREVIGKGGSTIQALTKETGTTIDI---QEDGTITIASTSTDGMAEAKRRIEGITAEA 621
>sp|Q7TN79|AKA7G_MOUSE A-kinase anchor protein 7 isoform gamma OS=Mus musculus GN=Akap7
PE=1 SV=2
Length = 314
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%)
Query: 341 TFHLTVLMLKLWNKDRVNAATNVLKSISSKVMDALDNRPLFIRLKGLDLMRGS 393
+FH+T+L+++L N+D VN T+ L + V + L+ + L + +G+ +G
Sbjct: 91 SFHITLLVMQLLNEDEVNIGTDALLELKPFVEEILEGKHLALPFQGIGTFQGQ 143
>sp|Q0KCT4|PNP_CUPNH Polyribonucleotide nucleotidyltransferase OS=Cupriavidus necator
(strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=pnp
PE=3 SV=1
Length = 723
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 165 IRFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSIIIEGNSTDSVAKASEKIQAIIAEA 222
IR + GK GST + KE G I + +++ +I I STD +A+A +I+ I AEA
Sbjct: 567 IREVIGKGGSTIQALTKETGTTIDI---QEDGTITIASTSTDGMAEAKRRIEGITAEA 621
>sp|Q1LPW7|PNP_RALME Polyribonucleotide nucleotidyltransferase OS=Ralstonia
metallidurans (strain CH34 / ATCC 43123 / DSM 2839)
GN=pnp PE=3 SV=1
Length = 725
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 165 IRFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSIIIEGNSTDSVAKASEKIQAIIAEA 222
IR + GK GST + KE G I + +++ +I I STD +A+A +I+ I AEA
Sbjct: 567 IREVIGKGGSTIQALTKETGTTIDI---QEDGTITIASTSTDGMAEAKRRIEGITAEA 621
>sp|Q6JP77|AKA7G_RAT A-kinase anchor protein 7 isoforms delta and gamma OS=Rattus
norvegicus GN=Akap7 PE=1 SV=1
Length = 353
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 341 TFHLTVLMLKLWNKDRVNAATNVLKSISSKVMDALDNRPLFIRLKGLDLMRGS 393
+FH+T+L+++L N+D VN T+ L + V + L+ + L + G+ +G
Sbjct: 130 SFHITLLVMQLLNEDEVNIGTDALLELKPFVEEILEGKHLTLPFHGIGTFQGQ 182
>sp|B3R3W3|PNP_CUPTR Polyribonucleotide nucleotidyltransferase OS=Cupriavidus
taiwanensis (strain R1 / LMG 19424) GN=pnp PE=3 SV=1
Length = 723
Score = 36.2 bits (82), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 165 IRFIKGKEGSTQKKFEKEMGVKIILPSSKKEDSIIIEGNSTDSVAKASEKIQAIIAEA 222
IR + GK GST + KE G I + +++ +I I ST+ +A+A +I+ I AEA
Sbjct: 567 IREVIGKGGSTIQALTKETGTTIDI---QEDGTITIASTSTEGMAEAKRRIEGITAEA 621
>sp|Q9P0M2|AKA7G_HUMAN A-kinase anchor protein 7 isoform gamma OS=Homo sapiens GN=AKAP7
PE=1 SV=2
Length = 348
Score = 32.3 bits (72), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 28/47 (59%)
Query: 341 TFHLTVLMLKLWNKDRVNAATNVLKSISSKVMDALDNRPLFIRLKGL 387
+FH+T+L+++L N+D VN + L + + + L + L + +G+
Sbjct: 125 SFHITLLVMQLLNEDEVNIGIDALLELKPFIEELLQGKHLTLPFQGI 171
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 161,981,854
Number of Sequences: 539616
Number of extensions: 6669295
Number of successful extensions: 19009
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 123
Number of HSP's that attempted gapping in prelim test: 18968
Number of HSP's gapped (non-prelim): 172
length of query: 465
length of database: 191,569,459
effective HSP length: 121
effective length of query: 344
effective length of database: 126,275,923
effective search space: 43438917512
effective search space used: 43438917512
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)