Query 012377
Match_columns 465
No_of_seqs 46 out of 48
Neff 2.8
Searched_HMMs 13730
Date Mon Mar 25 08:16:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012377.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/012377hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1yzma1 a.2.19.1 (A:456-501) F 75.9 2.2 0.00016 30.5 5.0 41 62-104 5-45 (46)
2 d2agjh1 b.1.1.1 (H:1-120) Immu 41.8 17 0.0013 29.2 5.2 53 326-379 24-87 (120)
3 d1nuwa_ e.7.1.1 (A:) Fructose- 37.4 9.9 0.00072 35.4 3.4 77 319-413 147-224 (328)
4 d1r0ah1 b.1.1.1 (H:1-123) Immu 37.1 23 0.0017 28.7 5.3 59 320-379 14-87 (123)
5 d1d9qa_ e.7.1.1 (A:) Fructose- 36.3 16 0.0012 33.9 4.7 81 318-416 161-242 (340)
6 d1lmka1 b.1.1.1 (A:2-127) Immu 35.4 28 0.002 28.5 5.5 56 320-379 13-85 (126)
7 d1rz7h1 b.1.1.1 (H:1-113) Immu 32.5 34 0.0024 27.6 5.5 57 319-379 13-86 (119)
8 g1mhm.1 d.156.1.1 (B:,A:) S-ad 31.4 9.5 0.00069 35.7 2.1 39 325-382 217-255 (323)
9 d1bz7b1 b.1.1.1 (B:1-122) Immu 29.8 41 0.003 27.1 5.6 56 320-378 14-85 (122)
10 d1tjgh1 b.1.1.1 (H:1-113) Immu 29.6 34 0.0025 27.8 5.2 60 319-379 13-87 (132)
11 d1um5h1 b.1.1.1 (H:3-119) Immu 29.3 44 0.0032 26.8 5.7 57 320-379 13-85 (117)
12 d1etzb1 b.1.1.1 (B:1-126) Immu 28.5 40 0.0029 27.1 5.3 51 326-377 24-85 (126)
13 d1mjuh1 b.1.1.1 (H:1-113) Immu 28.5 36 0.0027 27.4 5.0 57 320-379 14-86 (116)
14 d2gjxa2 d.92.2.1 (A:23-166) be 28.3 74 0.0054 23.6 6.7 59 398-456 32-106 (144)
15 d1sf9a_ b.34.15.1 (A:) Hypothe 27.2 36 0.0026 28.0 4.7 31 62-94 28-58 (118)
16 d2fbjh1 b.1.1.1 (H:1-118) Immu 26.7 55 0.004 26.3 5.9 55 320-378 14-85 (118)
17 d1ieha_ b.1.1.1 (A:) Camelid I 26.4 48 0.0035 27.4 5.6 58 319-379 13-86 (135)
18 d1u00a1 a.8.4.1 (A:504-615) Ch 26.4 62 0.0045 24.7 5.9 65 48-116 20-86 (112)
19 d1eapb1 b.1.1.1 (B:1-124) Immu 26.3 44 0.0032 26.9 5.2 56 319-377 13-84 (119)
20 d1nkpa_ a.38.1.1 (A:) Myc prot 25.5 32 0.0023 25.3 3.9 36 62-97 51-86 (88)
21 d2ayua1 d.305.1.1 (A:70-370) N 22.8 53 0.0039 29.6 5.6 48 63-110 25-72 (301)
22 d7fabh1 b.1.1.1 (H:1-116) Immu 22.4 70 0.0051 25.5 5.7 30 319-351 13-46 (116)
23 d1djqa2 c.3.1.1 (A:490-645) Tr 21.2 25 0.0018 27.1 2.6 49 343-401 1-54 (156)
24 d1ai1h1 b.1.1.1 (H:1-112) Immu 21.1 25 0.0018 28.4 2.6 58 320-378 14-86 (120)
25 d1sjva_ b.1.1.1 (A:) Camelid I 20.4 56 0.0041 25.8 4.6 56 320-379 7-78 (107)
26 d1nlbh1 b.1.1.1 (H:1-113) Immu 20.3 70 0.0051 25.7 5.3 58 319-379 13-86 (118)
No 1
>d1yzma1 a.2.19.1 (A:456-501) FYVE finger-containing Rab5 effector protein rabenosyn-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.93 E-value=2.2 Score=30.55 Aligned_cols=41 Identities=27% Similarity=0.342 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhHHHHHHHHHHHhHHh
Q 012377 62 KEEIHSLRQQIAVACLKELQLQNEKYTLERKVSELRMAIDEKQ 104 (465)
Q Consensus 62 EEEI~~LRk~LadasvKE~QllnEKyvLErRiA~mRmAfDqqQ 104 (465)
-|.|..+|..|-.| |++.=+.|-.+||+-+.+|.-.|++||
T Consensus 5 lqQi~~ik~yI~QA--k~a~R~dEV~~Le~NLreLq~e~~~qq 45 (46)
T d1yzma1 5 LQQIHNITSFIRQA--KAAGRMDEVRTLQENLRQLQDEYDQQQ 45 (46)
T ss_dssp HHHHHHHHHHHHHH--HHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--HHhcchHHHHHHHHHHHHHHHHHHhhc
Confidence 36788999999887 788899999999999999999999998
No 2
>d2agjh1 b.1.1.1 (H:1-120) Immunoglobulin heavy chain variable domain, VH {Engineered (including hybrid species)}
Probab=41.82 E-value=17 Score=29.16 Aligned_cols=53 Identities=15% Similarity=0.293 Sum_probs=33.4
Q ss_pred ecccccCCcccceeeeEEeccCCcccccc-----cCC------CcceeeecccccceeEEEeeec
Q 012377 326 GCGYPVRGTTLCMFQWVRHLQDGTRHYIE-----GAT------NPEYVVTADDVDKLIAVECIPM 379 (465)
Q Consensus 326 acG~~inGTt~c~FqWVrhleDGs~~~Ie-----gA~------~p~Y~vTADDvd~llAiec~Pm 379 (465)
+.||++..+.-+++ |+|+......++|- |.+ +-.+.|+.|.-.+.+.++..-|
T Consensus 24 ~SG~s~ss~~~~~~-WyRQ~Pg~~le~l~~i~~~~~~~~~~~~~gRft~s~d~s~~~~~L~i~~l 87 (120)
T d2agjh1 24 FSGFSLTTTGEGVG-WIRQPPGKALEFLAFIYWNDAKRYNPSLQSRLTITKDASKKQVVLTLTNL 87 (120)
T ss_dssp EESCCTTSSSCEEE-EEEECTTSCCEEEEEEEGGGCEEECGGGCSSEEEECCTTTTEEEEEEESC
T ss_pred EcccCccCCCCeEe-eccccccccceeeecccCCcccccchhhccccceecccccceeeeeEEee
Confidence 55888887666765 99998876544332 211 2246777777776666655444
No 3
>d1nuwa_ e.7.1.1 (A:) Fructose-1,6-bisphosphatase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=37.43 E-value=9.9 Score=35.42 Aligned_cols=77 Identities=18% Similarity=0.382 Sum_probs=56.4
Q ss_pred CCCcceeecccccCCcccceeeeEEeccCCcccccccCCCcceeeecccccceeEEEeeecCCCCcccceeEEee-cCCC
Q 012377 319 TPGEKLLGCGYPVRGTTLCMFQWVRHLQDGTRHYIEGATNPEYVVTADDVDKLIAVECIPMDDQGRQGELVRRFA-NDQN 397 (465)
Q Consensus 319 ~pG~~L~acG~~inGTt~c~FqWVrhleDGs~~~IegA~~p~Y~vTADDvd~llAiec~Pmdd~~rkGelV~~~a-Nd~~ 397 (465)
.||+++.|.||.+=|.+.-. |-.+.+|..-|.=....-+|++|-.++ .+.++ -+.|+ |++|
T Consensus 147 q~G~~qvAAGY~lYGpsT~l---v~t~g~gv~~FtlD~~~geF~l~~~~i---------~ip~~------~~~ysin~~n 208 (328)
T d1nuwa_ 147 QPGRNLVAAGYALYGSATML---VLAMVNGVNCFMLDPAIGEFILVDRDV---------KIKKK------GSIYSINEGY 208 (328)
T ss_dssp CCGGGCSEEEEEEESSSEEE---EEEETTEEEEEEEETTTTEEEEEECSC---------CCCSS------CSEEECCGGG
T ss_pred CCChhheeeeeEEEecceEE---EEEECCcEeEEEEcCCCceeeeccccc---------ccCCC------cceeeccccc
Confidence 58999999999999865443 235677777676666666777776553 12233 35788 9999
Q ss_pred ccccCccchHHHHHHh
Q 012377 398 KIKCDLGMQSEIDAYI 413 (465)
Q Consensus 398 kI~cdp~mq~~I~~~~ 413 (465)
.-.++|.|++-|+...
T Consensus 209 ~~~w~~~~~~yi~~~~ 224 (328)
T d1nuwa_ 209 AKEFDPAITEYIQRKK 224 (328)
T ss_dssp GGGCCHHHHHHHHHHH
T ss_pred hhhhCHHHHHHHHHhh
Confidence 9999999999999643
No 4
>d1r0ah1 b.1.1.1 (H:1-123) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 6 [TaxId: 10090]}
Probab=37.13 E-value=23 Score=28.68 Aligned_cols=59 Identities=10% Similarity=0.278 Sum_probs=36.1
Q ss_pred CCccee----ecccccCCcccceeeeEEeccCCccccc---ccCCCc--------ceeeecccccceeEEEeeec
Q 012377 320 PGEKLL----GCGYPVRGTTLCMFQWVRHLQDGTRHYI---EGATNP--------EYVVTADDVDKLIAVECIPM 379 (465)
Q Consensus 320 pG~~L~----acG~~inGTt~c~FqWVrhleDGs~~~I---egA~~p--------~Y~vTADDvd~llAiec~Pm 379 (465)
||..|+ ++||++..+.-|+ .|||+......++| .....+ .+.|+.|.-.+-+.++..-|
T Consensus 14 pg~sv~LsC~~SG~s~s~~~y~~-~W~RQ~pGkgle~i~~i~~~~~~~y~~~~k~Rftis~D~s~~~~~L~i~sl 87 (123)
T d1r0ah1 14 PSQPFRLTCTFSGFSLSTSGIGV-TWIRQPSGKGLEWLATIWWDDDNRYNPSLKSRLTVSKDTSNNQAFLNMMTV 87 (123)
T ss_dssp TTCCEEEEEEEESSCTTSTTEEE-EEEEEETTSCCEEEEEEETTSCCEECTTTGGGEEEEEEGGGTEEEEEECSC
T ss_pred CCCCeEEEEEEcCCccCCCCCee-eccccCCCcceEeeeeecCCccccccceeeEEEEccccccceeEEcceeec
Confidence 666554 4589886555555 59999887766544 222222 35677777776666665544
No 5
>d1d9qa_ e.7.1.1 (A:) Fructose-1,6-bisphosphatase {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=36.26 E-value=16 Score=33.87 Aligned_cols=81 Identities=22% Similarity=0.419 Sum_probs=58.5
Q ss_pred cCCCcceeecccccCCcccceeeeEEeccCCcccccccCCCcceeeecccccceeEEEeeecCCCCcccceeEEee-cCC
Q 012377 318 ATPGEKLLGCGYPVRGTTLCMFQWVRHLQDGTRHYIEGATNPEYVVTADDVDKLIAVECIPMDDQGRQGELVRRFA-NDQ 396 (465)
Q Consensus 318 a~pG~~L~acG~~inGTt~c~FqWVrhleDGs~~~IegA~~p~Y~vTADDvd~llAiec~Pmdd~~rkGelV~~~a-Nd~ 396 (465)
--||+++.|.||.+=|.+.+. |--+.+|..-|.=....-+|++|.+++- +.+++ ++|+ |++
T Consensus 161 lqpG~~~vaAGY~lYG~sT~l---v~t~g~gv~~FtlD~~~gef~lt~~~i~---------ip~~~------~~ys~n~~ 222 (340)
T d1d9qa_ 161 CQPGSNLLAAGYCMYSSSVIF---VLTIGKGVFVFTLDPLYGEFVLTQENLQ---------IPKSG------KIYSFNEG 222 (340)
T ss_dssp CCTTTSEEEEEEEEESSSEEE---EEESSSCCEEEEEETTTTEEEEEESSCC---------CCSCC------SEEECCGG
T ss_pred cCCccceeEEEEEEECCceEE---EEEECCCEEEEEEcCCCCeEEEeccccc---------cCCCc------ccccCCcc
Confidence 468999999999999876654 3355667666655555556777776652 22332 7888 889
Q ss_pred CccccCccchHHHHHHhhhc
Q 012377 397 NKIKCDLGMQSEIDAYISRG 416 (465)
Q Consensus 397 ~kI~cdp~mq~~I~~~~~~G 416 (465)
|.-.+++.+|+-|+.....|
T Consensus 223 n~~~w~~~~~~yi~~~~~~~ 242 (340)
T d1d9qa_ 223 NYKLWDENLKKYIDDLKEPG 242 (340)
T ss_dssp GGGGSCHHHHHHHHHHTSCC
T ss_pred chhhhhHHHHHHHHHHhccC
Confidence 99999999999999876543
No 6
>d1lmka1 b.1.1.1 (A:2-127) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}
Probab=35.36 E-value=28 Score=28.48 Aligned_cols=56 Identities=20% Similarity=0.361 Sum_probs=33.9
Q ss_pred CCcce----eecccccCCcccceeeeEEeccCCc-------------ccccccCCCcceeeecccccceeEEEeeec
Q 012377 320 PGEKL----LGCGYPVRGTTLCMFQWVRHLQDGT-------------RHYIEGATNPEYVVTADDVDKLIAVECIPM 379 (465)
Q Consensus 320 pG~~L----~acG~~inGTt~c~FqWVrhleDGs-------------~~~IegA~~p~Y~vTADDvd~llAiec~Pm 379 (465)
||..| +++||+++. +-+.|||+.--.- .+|-+.. +=.+.|+.|+-.+-+-++..-|
T Consensus 13 Pg~sl~LsC~~SG~~~~~---y~~~WvRQ~PGkglEwvg~i~~~~~~~~y~~s~-kgRfTiS~D~s~nt~yL~m~~L 85 (126)
T d1lmka1 13 PGRSLKISCKTTGYIFSN---YWIEWVKQRPGHGLEWIGKILPGGGSNTYNDKF-KGKATFTADTSSNIAYMQLSSL 85 (126)
T ss_dssp TTCCEEEEEEEESSCTTT---EEEEEEEECTTSCEEEEEEEETTTTEEEECGGG-TTTEEEEEETTTTEEEEEECSC
T ss_pred CCCCeEEEEEEccCCCCC---CCCcceeeCCCccceeeeecCccccchhhhhhh-ccceEEEecCCccEEEeeeccc
Confidence 55544 577888873 5689999755333 2222211 2245788887777777765544
No 7
>d1rz7h1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Human (Homo sapiens), cluster 1 [TaxId: 9606]}
Probab=32.52 E-value=34 Score=27.60 Aligned_cols=57 Identities=23% Similarity=0.376 Sum_probs=34.3
Q ss_pred CCCcce----eecccccCCcccceeeeEEeccC-------------CcccccccCCCcceeeecccccceeEEEeeec
Q 012377 319 TPGEKL----LGCGYPVRGTTLCMFQWVRHLQD-------------GTRHYIEGATNPEYVVTADDVDKLIAVECIPM 379 (465)
Q Consensus 319 ~pG~~L----~acG~~inGTt~c~FqWVrhleD-------------Gs~~~IegA~~p~Y~vTADDvd~llAiec~Pm 379 (465)
-||..| +++||+++. +-+.||||.-. |+.+|-+. -+=.+.|+.|.-.+-+-++..-|
T Consensus 13 kpg~sl~LsC~~SG~~~~~---~~~~WvRQ~PGkglewv~~i~~~~~~~~ya~s-~kgRftiSrD~s~nt~yLqm~sL 86 (119)
T d1rz7h1 13 KPGATVKISCKASGYTFSD---FYMYWVRQAPGKGLEWMGLIDPEDADTMYAEK-FRGRVTITADTSTDTGYLELSSL 86 (119)
T ss_dssp CTTCCEEEEEEEESSCGGG---SCEEEEEECTTSCEEEEEEEETTTTEEEECTT-TTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCCCEEEEEEEcCCCCcC---CceEccccCCccceeeeeecCCcccccccccc-eeeeEEEecccCceEEEeeeecc
Confidence 355554 578888852 45689999643 32222222 12357788888877776665433
No 8
>g1mhm.1 d.156.1.1 (B:,A:) S-adenosylmethionine decarboxylase {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=31.36 E-value=9.5 Score=35.72 Aligned_cols=39 Identities=26% Similarity=0.435 Sum_probs=29.3
Q ss_pred eecccccCCcccceeeeEEeccCCcccccccCCCcceeeecccccceeEEEeeecCCC
Q 012377 325 LGCGYPVRGTTLCMFQWVRHLQDGTRHYIEGATNPEYVVTADDVDKLIAVECIPMDDQ 382 (465)
Q Consensus 325 ~acG~~inGTt~c~FqWVrhleDGs~~~IegA~~p~Y~vTADDvd~llAiec~Pmdd~ 382 (465)
.-||||+|| |.|+.--+-=||..+--.+.+.|+.+++..
T Consensus 217 ~PCGYSmN~-------------------i~~~~Y~TIHVTPE~~~SYaSFETn~~~~~ 255 (323)
T g1mhm.1 217 EPCGYSMNS-------------------IEGAAVSTIHITPEDGFTYASFESVGYNPK 255 (323)
T ss_dssp SSSCEEEEE-------------------EETTEEEEEEEECCTTSCEEEEEEESCCTT
T ss_pred Ccccccccc-------------------ccCCcceEEEECCCCCcceeEEEeccCCcc
Confidence 469999997 345544466699999999999999765433
No 9
>d1bz7b1 b.1.1.1 (B:1-122) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 2.2 [TaxId: 10090]}
Probab=29.80 E-value=41 Score=27.12 Aligned_cols=56 Identities=14% Similarity=0.415 Sum_probs=33.2
Q ss_pred CCccee----ecccccCCcccceeeeEEeccCCccccc---c-cCCCc--------ceeeecccccceeEEEeee
Q 012377 320 PGEKLL----GCGYPVRGTTLCMFQWVRHLQDGTRHYI---E-GATNP--------EYVVTADDVDKLIAVECIP 378 (465)
Q Consensus 320 pG~~L~----acG~~inGTt~c~FqWVrhleDGs~~~I---e-gA~~p--------~Y~vTADDvd~llAiec~P 378 (465)
||.-|+ ++||+++ .+-+.|||+.--.-.+.| - +...+ .+.|+.|+-.+-+-++..-
T Consensus 14 Pg~sl~LsC~~SG~s~s---~y~~~WvRQ~PGkglewl~~i~~~~~~~~Y~~s~kgRftiSrD~s~~t~yL~m~s 85 (122)
T d1bz7b1 14 PGGSRKLSCAASGFTFS---NFGMHWVRQAPEKGLEWVAYISSGGSSINYADTVKGRFTISRDNPKNTLFLQMTS 85 (122)
T ss_dssp TTCCEEEEEEEESSCGG---GSCEEEEEECSSSCEEEEEEECSSSSCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred CCCCeEEEEEEcCCCCc---CCceEccccCCCcceeeeeecCcccccccccceeeeeEEEeccCCccEeEeeeee
Confidence 666553 7799885 467799998544333322 1 11122 3577777777766666443
No 10
>d1tjgh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Engineered (including hybrid species)}
Probab=29.62 E-value=34 Score=27.80 Aligned_cols=60 Identities=12% Similarity=0.274 Sum_probs=34.4
Q ss_pred CCCccee----ecccccCCcccceeeeEEeccCCccccc---ccCCC--------cceeeecccccceeEEEeeec
Q 012377 319 TPGEKLL----GCGYPVRGTTLCMFQWVRHLQDGTRHYI---EGATN--------PEYVVTADDVDKLIAVECIPM 379 (465)
Q Consensus 319 ~pG~~L~----acG~~inGTt~c~FqWVrhleDGs~~~I---egA~~--------p~Y~vTADDvd~llAiec~Pm 379 (465)
-||.-|. ++||++.-.+.|++ |+|+.-....++| ..... ..+.|+.|+-.+-+-++..-|
T Consensus 13 kpg~Sl~LsC~~SG~~~s~~~~~~~-WyRQ~pG~~le~l~~i~~~~~~~y~~~~k~Rftis~d~s~~~~~L~i~~l 87 (132)
T d1tjgh1 13 KPTQTLTLTCSFSGFSLSDFGVGVG-WIRQPPGKALEWLAIIYSDDDKRYSPSLNTRLTITKDTSKNQVVLVMTRV 87 (132)
T ss_dssp CTTCCEEEEEEEESSCTTSTTCEEE-EEEECTTSCCEEEEEEETTSCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCCCeEEEEEEeCCCcCCCCCceE-EEEECCCcccEEEEEecCCCccEeeeeeeecceecccccccEEEcccccC
Confidence 3566553 45788775554555 9999876666544 22222 234566676666555554433
No 11
>d1um5h1 b.1.1.1 (H:3-119) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}
Probab=29.30 E-value=44 Score=26.80 Aligned_cols=57 Identities=19% Similarity=0.351 Sum_probs=33.7
Q ss_pred CCcce----eecccccCCcccceeeeEEeccCCcccc---cc---------cCCCcceeeecccccceeEEEeeec
Q 012377 320 PGEKL----LGCGYPVRGTTLCMFQWVRHLQDGTRHY---IE---------GATNPEYVVTADDVDKLIAVECIPM 379 (465)
Q Consensus 320 pG~~L----~acG~~inGTt~c~FqWVrhleDGs~~~---Ie---------gA~~p~Y~vTADDvd~llAiec~Pm 379 (465)
||..| +++||+++ ++-+.|||+.--.-.++ |- .+-+-.+.+|.|+-.+-+-++..-|
T Consensus 13 PG~sl~LsC~~SG~~~~---~y~~~WvRQ~pGkglewl~~i~~~~~~~~y~~~~kgRftiS~D~s~~t~~L~m~sL 85 (117)
T d1um5h1 13 PGGSVKMSCKASEYTLT---SYLFQWVKQKSGQGLEWIGYIYPYNGGTRYNEKFRGKATLTSDKSSNTAYLELSSL 85 (117)
T ss_dssp TTCCEEEEEEESSCCCS---CCEEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTCEEEEEETTTTEEEEEECSC
T ss_pred CCCCEEEEEEEccccCC---CCcCccceeCCCccceeeeecCCccCccccccceeeeEEEEeccCceeEeeccccc
Confidence 56555 47788885 46779999964332221 11 1223456788887777666654433
No 12
>d1etzb1 b.1.1.1 (B:1-126) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 6 [TaxId: 10090]}
Probab=28.55 E-value=40 Score=27.10 Aligned_cols=51 Identities=10% Similarity=0.296 Sum_probs=30.6
Q ss_pred ecccccCCcccceeeeEEeccCCcccccc-----cCC------CcceeeecccccceeEEEee
Q 012377 326 GCGYPVRGTTLCMFQWVRHLQDGTRHYIE-----GAT------NPEYVVTADDVDKLIAVECI 377 (465)
Q Consensus 326 acG~~inGTt~c~FqWVrhleDGs~~~Ie-----gA~------~p~Y~vTADDvd~llAiec~ 377 (465)
++||++....-|+ .|||+--....++|- |.+ +--+.|+.|+-.+-+-++..
T Consensus 24 ~SG~s~s~~~~~~-~W~RQ~pg~~le~l~~i~~~~~~~~~~s~~~Rftis~d~s~~t~~L~i~ 85 (126)
T d1etzb1 24 FSGFSLSTSGMGV-GWIRQPSGEGLEWLADIWWNDKKYYNPSLKSRLTVSKDTSSNQVFLKIT 85 (126)
T ss_dssp EESSCTTSTTEEE-EEEEEETTTCCEEEEEEETTCCEEECTTTTTTEEEEEETTTTEEEEEEC
T ss_pred EeCCccCCCCCCC-eEEeCCCCccceEeeecCCCCCceeceeeeEeeEEecccCCcEEEccee
Confidence 4589987655555 599998776655432 211 22456777766665555543
No 13
>d1mjuh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}
Probab=28.51 E-value=36 Score=27.43 Aligned_cols=57 Identities=18% Similarity=0.374 Sum_probs=34.3
Q ss_pred CCcce----eecccccCCcccceeeeEEeccCCccccc---c-cCCC--------cceeeecccccceeEEEeeec
Q 012377 320 PGEKL----LGCGYPVRGTTLCMFQWVRHLQDGTRHYI---E-GATN--------PEYVVTADDVDKLIAVECIPM 379 (465)
Q Consensus 320 pG~~L----~acG~~inGTt~c~FqWVrhleDGs~~~I---e-gA~~--------p~Y~vTADDvd~llAiec~Pm 379 (465)
||..| +++||++++ ..+.|||+---.-.+.| - +... =.+.+|+|+-.+-+-++..-|
T Consensus 14 Pg~sl~LsC~~SG~s~~~---~~~~WvRQ~PGkgLEw~g~i~~~~~~~~ya~s~kgR~tiS~D~s~~tvyL~~~sL 86 (116)
T d1mjuh1 14 PGASVKLSCKASGYTFTN---YWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSL 86 (116)
T ss_dssp TTCCEEEEEEEESSCGGG---SCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCCEEEEEEEccCcccc---CceEeeeeCCCcceeeeeecCccccccccccccceeeeEecccccceeEeccccc
Confidence 55554 688999963 46689997655444322 1 1122 245777777777666665433
No 14
>d2gjxa2 d.92.2.1 (A:23-166) beta-hexosaminidase A {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.25 E-value=74 Score=23.63 Aligned_cols=59 Identities=12% Similarity=0.112 Sum_probs=28.7
Q ss_pred ccccCccchHHHHHHhhhcceEEEEE--eecccccccccceeEEe--------------ecceEEeecCCcceee
Q 012377 398 KIKCDLGMQSEIDAYISRGHATFSVL--MLMDSSENWEQATLILR--------------RSIYRIKIDSTEAIIE 456 (465)
Q Consensus 398 kI~cdp~mq~~I~~~~~~G~asf~V~--l~~~~~d~wE~atL~ir--------------R~gy~ik~~~~~~~i~ 456 (465)
.-.+..-+++.+++++..-...+.+. ...........++++++ -++|+|..+.+++.|.
T Consensus 32 ~~~~~~~l~~a~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~EsY~L~I~~~~i~I~ 106 (144)
T d2gjxa2 32 AQPGCSVLDEAFQRYRDLLFGSGSWPRPYLTGKRHTLEKNVLVVSVVTPGCNQLPTLESVENYTLTINDDQCLLL 106 (144)
T ss_dssp SCTTCHHHHHHHHHHHHHHHC--------------CEECEEEEEESSCCCSSSCCCTTCCCCEEEEESSSCEEEE
T ss_pred cchHHHHHHHHHHHHhhhhccccccccccccccccccccceEEEEeecCCccccccCCCCCCeEEEEcCCeEEEE
Confidence 33344557777877765332222222 12222333444555544 4899999986666664
No 15
>d1sf9a_ b.34.15.1 (A:) Hypothetical protein YfhH {Bacillus subtilis [TaxId: 1423]}
Probab=27.17 E-value=36 Score=27.97 Aligned_cols=31 Identities=32% Similarity=0.386 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhHHHHH
Q 012377 62 KEEIHSLRQQIAVACLKELQLQNEKYTLERKVS 94 (465)
Q Consensus 62 EEEI~~LRk~LadasvKE~QllnEKyvLErRiA 94 (465)
.+||..|+.+-..| ...-++||--|+||||+
T Consensus 28 ~~EIa~L~EKaRKA--Eq~GivnE~aV~erK~~ 58 (118)
T d1sf9a_ 28 NTEIALLSEKARKA--EQHGIINELAVLERKIT 58 (118)
T ss_dssp HHHHHHHHHHHHHH--HHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--HHccChhHHHHHHHHHH
Confidence 45666666655444 35678999999999986
No 16
>d2fbjh1 b.1.1.1 (H:1-118) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 2.2 [TaxId: 10090]}
Probab=26.71 E-value=55 Score=26.25 Aligned_cols=55 Identities=18% Similarity=0.449 Sum_probs=33.3
Q ss_pred CCccee----ecccccCCcccceeeeEEeccCC-------------cccccccCCCcceeeecccccceeEEEeee
Q 012377 320 PGEKLL----GCGYPVRGTTLCMFQWVRHLQDG-------------TRHYIEGATNPEYVVTADDVDKLIAVECIP 378 (465)
Q Consensus 320 pG~~L~----acG~~inGTt~c~FqWVrhleDG-------------s~~~IegA~~p~Y~vTADDvd~llAiec~P 378 (465)
||.-|. ++||+++ +.-+.||||.--. +.+|-+.. +=.+.|+.|.-.+.+-++..-
T Consensus 14 pg~sl~LsC~~SG~~~s---~y~~~WvRQ~PGkglEwv~~i~~~~~~~~Y~~s~-kgRftiSrD~s~nt~~L~~~s 85 (118)
T d2fbjh1 14 PGGSLKLSCAASGFDFS---KYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSL-KDKFIISRDNAKNSLYLQMSK 85 (118)
T ss_dssp TTCCEEEEEEEESSCGG---GSCEEEEEECTTSCEEEEEEECTTSSCEEECTTT-TTTEEEEECSSSCEEEEEECS
T ss_pred CCCCEEEEEEECCcccc---CCceeeeeecCCcceeeeeecCcccccccccccc-eeeEEEeecCccceeeccccc
Confidence 565553 6688875 3566899996433 33332222 224678888888777766543
No 17
>d1ieha_ b.1.1.1 (A:) Camelid IG heavy chain variable domain, VHh {Llama (Lama glama) [TaxId: 9844]}
Probab=26.39 E-value=48 Score=27.40 Aligned_cols=58 Identities=16% Similarity=0.468 Sum_probs=35.0
Q ss_pred CCCcce----eecccccCCcccceeeeEEeccCCccccc---c-cCCCc--------ceeeecccccceeEEEeeec
Q 012377 319 TPGEKL----LGCGYPVRGTTLCMFQWVRHLQDGTRHYI---E-GATNP--------EYVVTADDVDKLIAVECIPM 379 (465)
Q Consensus 319 ~pG~~L----~acG~~inGTt~c~FqWVrhleDGs~~~I---e-gA~~p--------~Y~vTADDvd~llAiec~Pm 379 (465)
-||..| +++||++++ .-+.|||+.-..-.+.| . +...+ .+.+|.|+-.+-+-++..-|
T Consensus 13 kPG~Sl~LsC~~SG~s~~~---y~~~WvRQ~PGkgLEWlg~I~~~~~~~~Ya~s~kgRfTiSrD~s~~t~yL~i~~L 86 (135)
T d1ieha_ 13 QPGGSLRVSCAASGFTFSS---YHMAWVRQAPGKGLEWVSTINPGDGSTYYADSVKGRFTISRDNAKNTLYLQMNSL 86 (135)
T ss_dssp CTTCEEEEEEEEESSCTTT---SCEEEEEECSSCCCEEEEEECSSSCCEEECSTTTTTEEEEECTTTCCEEEEEESC
T ss_pred CCCCCeEEEEEEcCCCCcC---CceeccccCCCCceeeeeccCCccccccccccceEeEEEeccCCCceeEecEeee
Confidence 355554 578999874 56899999655444432 1 11222 45677777776666665443
No 18
>d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]}
Probab=26.39 E-value=62 Score=24.75 Aligned_cols=65 Identities=18% Similarity=0.226 Sum_probs=49.2
Q ss_pred chhhhhHHHHhhccHHHHHHHHHHHHHHhhhhhhhh--hhhhhhHHHHHHHHHHHhHHhhHHHHHHHHHHH
Q 012377 48 DREAMELYSRARMQKEEIHSLRQQIAVACLKELQLQ--NEKYTLERKVSELRMAIDEKQNEAITSALNELA 116 (465)
Q Consensus 48 d~~~~~L~~k~re~EEEI~~LRk~LadasvKE~Qll--nEKyvLErRiA~mRmAfDqqQqdlVdAASKaLS 116 (465)
|-....|+-...+-|--|.++++.|.+..- +| .|+..++..|..||-+.+.-.-+.|.++.++|-
T Consensus 20 D~~~R~~ie~~n~ae~~i~~~e~~L~e~~~----~L~~~e~~~i~~~i~~l~~~l~~~d~~~I~~~~~~L~ 86 (112)
T d1u00a1 20 DVKARMLAEQKVEAARVLESLHGALAADAA----LLSAAERQVIDDAAAHLSEVAQGDDVDAIEQAIKNVD 86 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHGG----GSCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHh----hCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 445556655556667777788888876432 34 677789999999999999888888999888885
No 19
>d1eapb1 b.1.1.1 (B:1-124) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}
Probab=26.27 E-value=44 Score=26.88 Aligned_cols=56 Identities=20% Similarity=0.376 Sum_probs=31.9
Q ss_pred CCCccee----ecccccCCcccceeeeEEeccCCccccc---c-cCCC--------cceeeecccccceeEEEee
Q 012377 319 TPGEKLL----GCGYPVRGTTLCMFQWVRHLQDGTRHYI---E-GATN--------PEYVVTADDVDKLIAVECI 377 (465)
Q Consensus 319 ~pG~~L~----acG~~inGTt~c~FqWVrhleDGs~~~I---e-gA~~--------p~Y~vTADDvd~llAiec~ 377 (465)
-||..|+ ++||+++. .-+.|||+.--.-.+.| . +... -.+.++.|+-.+-+-++..
T Consensus 13 kPg~sl~LsC~~SG~~~~~---y~~~WvRQ~PGkglewl~~i~~~~~~~~y~~s~kgRftiSrD~s~nt~~L~~~ 84 (119)
T d1eapb1 13 KPGASVKISCKASGYISTD---HAIHWVKQRPEQGLEWIGYISPGNGDIKYNEKFKVKATLTADQSSSTAYMQLN 84 (119)
T ss_dssp CTTCCEEEEEEEESSCGGG---SCEEEEEECSSSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred CCCCCEEEEEEEccCcccC---CCCccceeCCcccceeeeecCCcccchhhhhhhhcceEEEcccCcceEEeeee
Confidence 3666654 67887763 45689998654433222 2 1222 2456777776666555543
No 20
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.50 E-value=32 Score=25.31 Aligned_cols=36 Identities=19% Similarity=0.179 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhHHHHHHHH
Q 012377 62 KEEIHSLRQQIAVACLKELQLQNEKYTLERKVSELR 97 (465)
Q Consensus 62 EEEI~~LRk~LadasvKE~QllnEKyvLErRiA~mR 97 (465)
-+-|..|.+.+.....+-.+|..+...|.++++.|+
T Consensus 51 ~~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~L~ 86 (88)
T d1nkpa_ 51 TAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQLG 86 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 455777777777666655566666666666666654
No 21
>d2ayua1 d.305.1.1 (A:70-370) Nucleosome assembly protein, NAP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.76 E-value=53 Score=29.58 Aligned_cols=48 Identities=25% Similarity=0.240 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhHHHHHHHHHHHhHHhhHHHHH
Q 012377 63 EEIHSLRQQIAVACLKELQLQNEKYTLERKVSELRMAIDEKQNEAITS 110 (465)
Q Consensus 63 EEI~~LRk~LadasvKE~QllnEKyvLErRiA~mRmAfDqqQqdlVdA 110 (465)
.-|..|++...++.--|+|...|-|.||++...++..+-++-.++|.+
T Consensus 25 ~rv~aLk~lq~e~~~le~~f~~e~~~LE~ky~~~~~ply~kR~~II~G 72 (301)
T d2ayua1 25 EKLLSLKTLQSELFEVEKEFQVEMFELENKFLQKYKPIWEQRSRIISG 72 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHCC
Confidence 457789999999999999999999999999999999998888888875
No 22
>d7fabh1 b.1.1.1 (H:1-116) Immunoglobulin heavy chain variable domain, VH {Human (Homo sapiens), cluster 2.1 [TaxId: 9606]}
Probab=22.36 E-value=70 Score=25.50 Aligned_cols=30 Identities=20% Similarity=0.381 Sum_probs=20.6
Q ss_pred CCCcce----eecccccCCcccceeeeEEeccCCccc
Q 012377 319 TPGEKL----LGCGYPVRGTTLCMFQWVRHLQDGTRH 351 (465)
Q Consensus 319 ~pG~~L----~acG~~inGTt~c~FqWVrhleDGs~~ 351 (465)
-||..| +++||+++. .-+.|||+.-..-.+
T Consensus 13 kPg~sl~LsC~~SG~~~~~---~~~~WvRQ~PGkglE 46 (116)
T d7fabh1 13 RPSQTLSLTCTVSGTSFDD---YYWTWVRQPPGRGLE 46 (116)
T ss_dssp CTTSCEEEEEEEESSCSTT---SEEEEEEECTTSCCE
T ss_pred CCCCCEEEEEEEeeecCCC---CcceeceECCCCcce
Confidence 356555 578998874 578899997665444
No 23
>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=21.24 E-value=25 Score=27.12 Aligned_cols=49 Identities=29% Similarity=0.310 Sum_probs=32.1
Q ss_pred EeccCCccc----ccccCCCc-ceeeecccccceeEEEeeecCCCCcccceeEEeecCCCcccc
Q 012377 343 RHLQDGTRH----YIEGATNP-EYVVTADDVDKLIAVECIPMDDQGRQGELVRRFANDQNKIKC 401 (465)
Q Consensus 343 rhleDGs~~----~IegA~~p-~Y~vTADDvd~llAiec~Pmdd~~rkGelV~~~aNd~~kI~c 401 (465)
|...+||.- .|.|+... .+++|.||+ |+-+..-|..|.+|--.+..|.|
T Consensus 1 ~~~atG~~~~~~~pipG~~~~~~~v~t~~d~----------l~~~~~~~~~vvi~d~ggg~ig~ 54 (156)
T d1djqa2 1 RWNTDGTNCLTHDPIPGADASLPDQLTPEQV----------MDGKKKIGKRVVILNADTYFMAP 54 (156)
T ss_dssp EECSSCCCTTTSSCCTTCCTTSTTEECHHHH----------HHTCSCCCSEEEEEECCCSSHHH
T ss_pred CccCCCCCCCCCCCCCCccCCCCEEECHHHH----------hcCccccCCceEEEecCCChHHH
Confidence 445677653 48898765 267799998 34455566677776666665554
No 24
>d1ai1h1 b.1.1.1 (H:1-112) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 7.3 [TaxId: 10090]}
Probab=21.12 E-value=25 Score=28.37 Aligned_cols=58 Identities=16% Similarity=0.362 Sum_probs=32.3
Q ss_pred CCcce----eecccccCCcccceeeeEEeccCCccccc---ccCCCc--------ceeeecccccceeEEEeee
Q 012377 320 PGEKL----LGCGYPVRGTTLCMFQWVRHLQDGTRHYI---EGATNP--------EYVVTADDVDKLIAVECIP 378 (465)
Q Consensus 320 pG~~L----~acG~~inGTt~c~FqWVrhleDGs~~~I---egA~~p--------~Y~vTADDvd~llAiec~P 378 (465)
||.-| +++||++..+.-|+. |||+.--...++| ...... .+.|+.|.-.+.+-++..-
T Consensus 14 Pg~sl~LsC~~SG~s~~~s~y~~~-W~RQ~PGkglEwl~~i~~~g~t~y~~s~kgRfTiSrD~s~n~~~L~~~s 86 (120)
T d1ai1h1 14 PSQSLSLTCIVSGFSITRTNYCWH-WIRQAPGKGLEWMGRICYEGSIYYSPSIKSRSTISRDTSLNKFFIQLIS 86 (120)
T ss_dssp SSSCEEEEEEEESSCTTSTTEEEE-EEEECTTSCEEEEEEEETTSCEEECHHHHTTEEEEEETTTTEEEEEESS
T ss_pred CCCCEEEEEEEcccccccCccccC-cccCCCcccceeeeecccccchhhchhhcccceeccccccceeecceee
Confidence 55554 467999876666665 9999654433322 111111 3456666666655555443
No 25
>d1sjva_ b.1.1.1 (A:) Camelid IG heavy chain variable domain, VHh {Llama (Lama glama) [TaxId: 9844]}
Probab=20.40 E-value=56 Score=25.77 Aligned_cols=56 Identities=20% Similarity=0.403 Sum_probs=28.9
Q ss_pred CCcce----eecccccCCcccceeeeEEeccC------------CcccccccCCCcceeeecccccceeEEEeeec
Q 012377 320 PGEKL----LGCGYPVRGTTLCMFQWVRHLQD------------GTRHYIEGATNPEYVVTADDVDKLIAVECIPM 379 (465)
Q Consensus 320 pG~~L----~acG~~inGTt~c~FqWVrhleD------------Gs~~~IegA~~p~Y~vTADDvd~llAiec~Pm 379 (465)
||..| +++||+++ .+-+.|||+.-- |+.+|-+..+ =.+.|+.|.-.+.+.++..-|
T Consensus 7 PG~sl~LsC~~SG~~~~---~~~~~WvRQ~PGkglewi~~i~~~g~t~y~~~~k-gR~tiSrd~s~n~~~L~i~~l 78 (107)
T d1sjva_ 7 AGESLKLSCAASGNTFS---GGFMGWYRQAPGKQRELVATINSRGITNYADFVK-GRFTISRDNAKKTVYLEMNSL 78 (107)
T ss_dssp TTCCEEEEECCCC--------CCEEEEEECTTSCCEEEEEECTTCCEEECTTTT-TCEEEEECTTTCCEEEEECSC
T ss_pred CCCCcEEEEEECCCCcc---CCcEEEEEeCCccceeeeeeeeeccccccccccc-cceEEecCCceeEEEEeecCC
Confidence 55544 46788875 245689999643 3333333222 136677777777666654433
No 26
>d1nlbh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}
Probab=20.30 E-value=70 Score=25.69 Aligned_cols=58 Identities=14% Similarity=0.370 Sum_probs=33.5
Q ss_pred CCCcce----eecccccCCcccceeeeEEeccCCccccc------ccC------CCcceeeecccccceeEEEeeec
Q 012377 319 TPGEKL----LGCGYPVRGTTLCMFQWVRHLQDGTRHYI------EGA------TNPEYVVTADDVDKLIAVECIPM 379 (465)
Q Consensus 319 ~pG~~L----~acG~~inGTt~c~FqWVrhleDGs~~~I------egA------~~p~Y~vTADDvd~llAiec~Pm 379 (465)
-||.-| .++||+++. .-+.|||+.--.-.+.| .|. -+=.+.||.|.-.+-+-++..-|
T Consensus 13 kPG~sl~LsC~~SG~s~~~---y~~~WvRQ~PGkglEwvg~i~~~~~~~~ya~~~kgRftisrD~s~~tvyL~~~~L 86 (118)
T d1nlbh1 13 KPGETVKISCKASGYTFTD---FSMHWVNQAPGKGLNWMGWVNTETGEPTYADDFKGRFAFSLETSASTAYLQINSL 86 (118)
T ss_dssp CTTCCEEEEEEEESSCGGG---SCEEEEEECTTSCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSC
T ss_pred CCCCCEEEEEEEcCCCCCC---CceeccccCCCccceeeeecCcccccchhhhheeeeeEEEecCCceeEEeeeeec
Confidence 355544 578888853 34679988644322221 111 12356788888777776665443
Done!