Query 012380
Match_columns 465
No_of_seqs 269 out of 1166
Neff 5.6
Searched_HMMs 46136
Date Fri Mar 29 02:02:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012380.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012380hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02867 Probable galacturonos 100.0 8E-134 2E-138 1057.1 35.1 462 1-464 1-467 (535)
2 PLN02870 Probable galacturonos 100.0 4E-133 9E-138 1048.2 33.1 455 1-464 1-465 (533)
3 PLN02659 Probable galacturonos 100.0 1E-131 3E-136 1037.2 30.8 455 1-464 1-466 (534)
4 PLN02829 Probable galacturonos 100.0 4.3E-97 9E-102 785.0 26.0 359 88-464 206-572 (639)
5 PLN02910 polygalacturonate 4-a 100.0 2E-96 4E-101 779.0 26.0 358 93-464 232-590 (657)
6 PLN02742 Probable galacturonos 100.0 1.2E-94 2.5E-99 759.3 26.7 359 93-464 109-468 (534)
7 PLN02523 galacturonosyltransfe 100.0 2.6E-89 5.5E-94 719.8 27.1 336 117-464 157-492 (559)
8 PLN02769 Probable galacturonos 100.0 6.7E-89 1.4E-93 726.4 23.9 343 94-464 218-563 (629)
9 PLN02718 Probable galacturonos 100.0 2.5E-84 5.3E-89 688.9 25.0 336 93-464 200-536 (603)
10 cd06429 GT8_like_1 GT8_like_1 100.0 1.7E-45 3.6E-50 363.6 13.4 201 211-464 1-203 (257)
11 PRK15171 lipopolysaccharide 1, 100.0 6.2E-34 1.4E-38 290.8 14.1 204 208-464 23-230 (334)
12 cd00505 Glyco_transf_8 Members 100.0 8.6E-32 1.9E-36 262.4 13.9 197 211-462 1-200 (246)
13 cd04194 GT8_A4GalT_like A4GalT 100.0 6.8E-31 1.5E-35 255.4 14.6 199 211-464 1-201 (248)
14 COG1442 RfaJ Lipopolysaccharid 100.0 2.5E-30 5.4E-35 262.6 14.8 199 210-464 2-204 (325)
15 cd06431 GT8_LARGE_C LARGE cata 100.0 2.1E-30 4.6E-35 259.1 13.7 198 212-463 4-209 (280)
16 cd06432 GT8_HUGT1_C_like The C 100.0 5.8E-30 1.3E-34 251.7 14.6 203 211-464 1-211 (248)
17 PF01501 Glyco_transf_8: Glyco 100.0 6.1E-28 1.3E-32 229.8 16.5 204 212-464 1-207 (250)
18 cd06430 GT8_like_2 GT8_like_2 100.0 8.2E-28 1.8E-32 242.0 14.7 200 211-463 1-216 (304)
19 cd02537 GT8_Glycogenin Glycoge 99.7 1.1E-16 2.4E-21 156.3 11.3 100 326-464 73-174 (240)
20 PLN00176 galactinol synthase 99.7 5.5E-16 1.2E-20 158.5 13.3 121 330-464 100-228 (333)
21 cd06914 GT8_GNT1 GNT1 is a fun 99.4 4E-13 8.6E-18 134.7 7.5 99 325-462 75-173 (278)
22 KOG1879 UDP-glucose:glycoprote 99.1 2.1E-10 4.6E-15 130.5 7.4 198 207-453 1178-1382(1470)
23 COG5597 Alpha-N-acetylglucosam 95.4 0.011 2.3E-07 60.4 2.9 94 330-426 155-272 (368)
24 PF03407 Nucleotid_trans: Nucl 87.4 2.5 5.3E-05 40.1 7.9 95 339-462 61-155 (212)
25 KOG1928 Alpha-1,4-N-acetylgluc 70.1 2.1 4.6E-05 45.3 1.2 32 330-365 228-259 (409)
26 PF11051 Mannosyl_trans3: Mann 68.4 3.3 7.1E-05 41.6 2.1 36 332-367 79-114 (271)
27 PLN02769 Probable galacturonos 54.0 31 0.00068 39.0 6.6 75 86-163 203-279 (629)
28 PF04488 Gly_transf_sug: Glyco 44.2 12 0.00027 31.7 1.3 35 325-363 61-96 (103)
29 PF05704 Caps_synth: Capsular 36.6 1.3E+02 0.0028 30.5 7.5 33 329-365 111-143 (276)
30 PLN02718 Probable galacturonos 35.1 99 0.0021 35.0 6.8 70 89-161 189-260 (603)
31 PF03071 GNT-I: GNT-I family; 34.9 74 0.0016 34.6 5.7 42 325-366 171-214 (434)
32 KOG2264 Exostosin EXT1L [Signa 34.8 79 0.0017 35.6 5.9 16 88-103 76-91 (907)
33 TIGR02978 phageshock_pspC phag 32.9 2.5E+02 0.0054 25.2 7.8 25 80-104 73-97 (121)
34 PF05637 Glyco_transf_34: gala 30.8 31 0.00068 34.1 2.0 97 327-428 61-160 (239)
35 PF03195 DUF260: Protein of un 30.6 1E+02 0.0022 26.8 4.9 43 117-159 54-100 (101)
36 PLN02829 Probable galacturonos 27.6 1.5E+02 0.0032 33.8 6.6 15 91-105 240-254 (639)
37 PF04491 Pox_T4_N: Poxvirus T4 25.2 34 0.00074 25.7 0.8 25 2-26 14-42 (46)
38 COG0836 {ManC} Mannose-1-phosp 23.4 42 0.0009 35.1 1.4 22 406-427 187-208 (333)
39 PLN03181 glycosyltransferase; 22.7 2E+02 0.0044 31.3 6.2 36 323-359 179-214 (453)
40 PF03314 DUF273: Protein of un 21.4 57 0.0012 32.2 1.8 23 337-359 35-57 (222)
41 PRK15383 type III secretion sy 21.0 43 0.00093 33.9 0.9 22 346-367 221-242 (335)
42 PRK15384 type III secretion sy 20.9 42 0.00091 33.9 0.8 22 346-367 218-239 (336)
43 PRK15382 non-LEE encoded effec 20.9 44 0.00095 33.8 0.9 23 345-367 212-234 (326)
No 1
>PLN02867 Probable galacturonosyltransferase
Probab=100.00 E-value=7.8e-134 Score=1057.11 Aligned_cols=462 Identities=79% Similarity=1.229 Sum_probs=419.6
Q ss_pred CeEEEeecceeeEEEccCCCCcccc---chhhhhcccccccccchHHHHHHHHHhhhHHHHHHHHHhhcCccCCCCCcCc
Q 012380 1 MKFYISTTGIKRVTISNTGTGKRSS---APAAALAGRRIPSSRTLLPVVLVLGIVLPFLFVRVAFLVLESSAVCSSSLGC 77 (465)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (465)
|||||||||||+|||||.|.|.... .+...||+||+ ||||+||++|+|||||||+|||+|++||||+++|||++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~f~f~~~~~~~~~~~~~c~s~~~c 79 (535)
T PLN02867 1 MKFYISTTGIKKVTISNPGSGKGSGGCAAAAAAAAARRF-SGRTLLPVLLLLAIVLPFLFVRIAFLVLESASACNSPLDC 79 (535)
T ss_pred CeeEEecCceeEEEecCCCCCCCCCcchHHHHHHhhcee-eheeHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccc
Confidence 9999999999999999976444333 33347899999 9999999999999999999999999999999999998999
Q ss_pred cccccccCCCchhHHHHHHHHHHHHhhcCCCCCCCccccccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHhh
Q 012380 78 IGRRIFSGSDTSLKLREELTRALIEAKDGSGNGGGRIQGTLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQSSR 157 (465)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~ee~~~~~~ 157 (465)
+|||+.||+|++.+++||++|+|.|++.++.++... +++|+||++++.+|++.+|||+++++|||||++++|||++++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~kl~am~~~~e~~~~~~~ 158 (535)
T PLN02867 80 IGLRLFGGSDTSLKLREELTRALVEAKEQDDGGRGT-KGSTESFNDLVKEMTSNRQDIKAFAFRTKAMLLKMERKVQSAR 158 (535)
T ss_pred cchhhhcCCCchhHHHHHHHHHHHHhhhccccCcch-hhhhhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988889999999999999999999776555543 2399999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHhhcCCCccchhhhHHHHHHHHhchhhhcCCCCCccCCCCCCCCccEEEEEeCCccccchhhhHhhhcCCCC
Q 012380 158 QRESIYWHLASHGVPKSLHCLCLKLAEEYAVNAMARSRLPSPEYVSHLTDPSFHHVVLLTDNVLAASVVVSSTVQNSARP 237 (465)
Q Consensus 158 ~~~~~~~~la~~~~Pk~~hcl~~rL~~e~~~~~~~~~~~~~~~~~~~l~d~~~ihIv~~sDn~la~sVvI~Siv~Ns~~p 237 (465)
+|++|++||||+|+|||+|||+||||+|||+++++++++|++|.+|+|+||+++|+|++|||+||+||||||++.|+++|
T Consensus 159 ~~~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d~~~~Hy~ifSdNvLAasVvvnStv~~a~~p 238 (535)
T PLN02867 159 QRESIYWHLASHGIPKSLHCLCLKLAEEYAVNAMARSRLPPPESVSRLTDPSFHHVVLLTDNVLAASVVISSTVQNAANP 238 (535)
T ss_pred HHHHHHHHHHhhhcCCCccccchhhHHHHHhCchhhccCCChhhhhhccCCCcceEEEEecceeEEEeeeehhhhcccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEeCCCCCcccchhhhhcccccchheecccccccccchhhhhHHHHHHHhhhHHHhhcccCcccccccchhhhh
Q 012380 238 EKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEMLEAHRLIWSHYYKNLKHEDFEYEGENRR 317 (465)
Q Consensus 238 ~~i~FHIvtD~i~~~~m~~Wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~le~~~~i~~~y~~~~~~~~i~~p~~~~~ 317 (465)
+++|||||||++||.+|++||.+||+++|+|||+|+|+|+|++.+|+||++|+|+.+.++.+||++........+.....
T Consensus 239 ~~~VfHvvTD~~ny~aM~~WF~~n~~~~a~v~V~~~~~f~wl~~~~~~v~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (535)
T PLN02867 239 EKLVFHIVTDKKTYTPMHAWFAINSIKSAVVEVKGLHQYDWSQEVNVGVKEMLEIHRLIWSHYYQNLKESDFQFEGTHKR 318 (535)
T ss_pred cceEEEEecCccccHHHHHHHhhCCCccceEEEEeehhccccccccccHHHHHHHhhhhhhhhhcccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999888788887643322122333345
Q ss_pred hhccCCCCccchhhhHHhhhccccCCCCcEEEEecceeeecChHHHHhcCCCCCeEEEEeccCCCCCCCCcccccccccc
Q 012380 318 CLEVLSPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNF 397 (465)
Q Consensus 318 ~l~~~~~~~iS~~~y~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~iDL~gkvigAVeDc~~~~~~~~~~r~~~yLnf 397 (465)
++++++|+|+|+++|+||+||++||+++||||||+|||||+||++||++||+|+++|||.|+.+....++.+++++|+||
T Consensus 319 ~~~~~~pkylS~lnYlRflIPeLLP~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNf 398 (535)
T PLN02867 319 SLEALSPSCLSLLNHLRIYIPELFPDLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNF 398 (535)
T ss_pred chhhcChhhhhHHHHHHHHHHHHhhccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhccc
Confidence 67789999999999999999999999999999999999999999999999999999999885433222234677889999
Q ss_pred CccccccCCCCCCCccccceeeEehHHHHHhcHHHHHHHHHHhhcc--cccccccchhHHHHHhcCccC
Q 012380 398 SYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLEHF--HQLCLLWMVTCILLILHGTWL 464 (465)
Q Consensus 398 s~p~i~~~f~~~~cyFNSGVlLiDL~~WRk~nite~~~~~l~~n~~--~~l~~~~d~~~l~l~F~~rwl 464 (465)
++|.+..+|+|++||||||||||||++||++++|+++++|++++.+ ..+|+++..++++++|+|+|.
T Consensus 399 snp~i~~~~~p~~cYFNSGVmLINL~~WRe~nITek~~~~Le~n~~~~~~l~dqd~LN~~LlvF~g~v~ 467 (535)
T PLN02867 399 SHPLISSNLDQERCAWLYGMNVFDLKAWRRTNITEAYHKWLKLSLNSGLQLWQPGALPPALLAFKGHVH 467 (535)
T ss_pred cchhhhccCCCCCcceecceeeeeHHHHHHhcHHHHHHHHHHhchhcccccccccccchHHHHhcCcEE
Confidence 9999988999999999999999999999999999999999999865 467766666788899999985
No 2
>PLN02870 Probable galacturonosyltransferase
Probab=100.00 E-value=4e-133 Score=1048.18 Aligned_cols=455 Identities=45% Similarity=0.741 Sum_probs=426.1
Q ss_pred CeEEEeecceeeEEEccCCCCccccchhhhhcccccccccchHHHHHHHHHhhhHHHHHHHHHhhcCccCCCCCcCcccc
Q 012380 1 MKFYISTTGIKRVTISNTGTGKRSSAPAAALAGRRIPSSRTLLPVVLVLGIVLPFLFVRVAFLVLESSAVCSSSLGCIGR 80 (465)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (465)
|..-|| .|||||||++| +|++|+| |+|||+||+ ||||+||++|++||||||+||++|++||||+++||| +||+||
T Consensus 1 ~~~~~~-~~~~~~~~~~~-~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~f~f~~~~~~~~~~~~~c~~-~~c~~~ 75 (533)
T PLN02870 1 MQLHIS-PSMRSITISSS-NGFIDLM-KIKVAARHI-SYRTLFHTILILAFLLPFVFILTAVVTLEGVNKCSS-FDCLGR 75 (533)
T ss_pred Cceeec-CccceEEEecC-CcHHHHH-HHHhhhccc-hhhhHHHHHHHHHHHHhHHHHhhhhhhhcccccCCc-cccccc
Confidence 455565 58999999999 9999999 999999999 999999999999999999999999999999999999 999999
Q ss_pred c-----cccCCCchhHHHHHHHHHHHHhhcCCCCCCCccccccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Q 012380 81 R-----IFSGSDTSLKLREELTRALIEAKDGSGNGGGRIQGTLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQS 155 (465)
Q Consensus 81 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~ee~~~~ 155 (465)
| +||++|+. +++||++++|.|++.+|.+.+++ +|+|+++++++|++.+|||+++++|||||++++|||+++
T Consensus 76 ~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~d~~---lp~s~~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~ 151 (533)
T PLN02870 76 RLGPRLLGRVDDSE-RLVRDFYKILNEVNTEEIPDGLK---LPDSFSQLVSDMKNNHYDAKTFAFVLRAMMEKFERELRE 151 (533)
T ss_pred ccCccccCCCCchh-hhHHHHHHHHHHhcccccccccc---CChhHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHH
Confidence 9 67777666 89999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHhhcCCCccchhhhHHHHHHHHhchhhhcCCCCCccCCCCCCCCccEEEEEeCCccccchhhhHhhhcCC
Q 012380 156 SRQRESIYWHLASHGVPKSLHCLCLKLAEEYAVNAMARSRLPSPEYVSHLTDPSFHHVVLLTDNVLAASVVVSSTVQNSA 235 (465)
Q Consensus 156 ~~~~~~~~~~la~~~~Pk~~hcl~~rL~~e~~~~~~~~~~~~~~~~~~~l~d~~~ihIv~~sDn~la~sVvI~Siv~Ns~ 235 (465)
+|+|++|++||||+|+|||+|||+||||+|||+++++++++|++|..|+|+||+++|+|++|||+||+||||||++.|++
T Consensus 152 ~~~~~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~e~~~~l~dp~~~Hy~ifSdNvLAasVvvnStv~~a~ 231 (533)
T PLN02870 152 SKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARKQLPSPELLPVLSDNSYHHFVLSTDNILAASVVVSSTVQSSL 231 (533)
T ss_pred HHHHHHHHHHHHHhhcCCCccccchhhHHHHHhCchhhhcCCcccccccccCCcceeEEEEecceeEEEeeeehhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEEeCCCCCcccchhhhhcccccchheecccccccccchhhhhHHHHHHHhhhHHHhhcccCccccc---ccc
Q 012380 236 RPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEMLEAHRLIWSHYYKNLKHEDF---EYE 312 (465)
Q Consensus 236 ~p~~i~FHIvtD~i~~~~m~~Wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~le~~~~i~~~y~~~~~~~~i---~~p 312 (465)
+|+++|||||||++|+.+|++||.+|++++|+|||+|+|+|+||+.+|+||++|+|+.+.++.+||++...... ..|
T Consensus 232 ~p~~~VFHvvTD~~n~~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~~~~pvl~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 311 (533)
T PLN02870 232 KPEKIVFHVITDKKTYAGMHSWFALNSVSPAIVEVKGVHQFDWLTRENVPVLEAVESHNGIRNYYHGNHIAGANLSETTP 311 (533)
T ss_pred CccceEEEEecCccccHHHHHHHhhCCCccceEEEEehhhccccccccchHHHHHhhhHHHHHHhhcccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999975443211 145
Q ss_pred hhhhhhhccCCCCccchhhhHHhhhccccCCCCcEEEEecceeeecChHHHHhcCCCCCeEEEEeccCCCCCCCCccccc
Q 012380 313 GENRRCLEVLSPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYK 392 (465)
Q Consensus 313 ~~~~~~l~~~~~~~iS~~~y~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~iDL~gkvigAVeDc~~~~~~~~~~r~~ 392 (465)
.++..++++++|+|+|+++|+|||||++||+++||||||+||||++||++||++||+|+++|||+||.....++..++++
T Consensus 312 ~~~~~~l~~~~p~ylS~lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~ 391 (533)
T PLN02870 312 RTFASKLQARSPKYISLLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFR 391 (533)
T ss_pred hhhhcccccCCccccCHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhh
Confidence 56777899999999999999999999999999999999999999999999999999999999999997543233346788
Q ss_pred cccccCccccccCCCCCCCccccceeeEehHHHHHhcHHHHHHHHHHhhcc--cccccccchhHHHHHhcCccC
Q 012380 393 DYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLEHF--HQLCLLWMVTCILLILHGTWL 464 (465)
Q Consensus 393 ~yLnfs~p~i~~~f~~~~cyFNSGVlLiDL~~WRk~nite~~~~~l~~n~~--~~l~~~~d~~~l~l~F~~rwl 464 (465)
.|+||++|.+..+|++++||||||||||||++||++++|+++++|++++.. ..+|+++..|++|++|+|+|.
T Consensus 392 ~YfNfs~p~i~~~fd~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQdaLp~~livf~g~v~ 465 (533)
T PLN02870 392 NYFNFSHPLIAKNLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVH 465 (533)
T ss_pred hhcccccchhhcccCcccceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceecccccccHhHHHhcCceE
Confidence 899999999999999999999999999999999999999999999998854 367777788899999999985
No 3
>PLN02659 Probable galacturonosyltransferase
Probab=100.00 E-value=1.2e-131 Score=1037.20 Aligned_cols=455 Identities=41% Similarity=0.686 Sum_probs=419.7
Q ss_pred CeEEEeecceeeEEEccCCCCccccchhhhhcccccccccchHHHHHHHHHhhhHHHHHHHHHhhcCccCCCCCcCcccc
Q 012380 1 MKFYISTTGIKRVTISNTGTGKRSSAPAAALAGRRIPSSRTLLPVVLVLGIVLPFLFVRVAFLVLESSAVCSSSLGCIGR 80 (465)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (465)
|..-|| .||||||||+| +|+.|+| |+||||||+ ||||+|||+|+|||||||+||++|++||||.++||| +||+|+
T Consensus 1 mq~~~s-p~~r~~t~~~~-~~~~~~~-~~~~~~~~~-~~r~~f~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~-~~~~~~ 75 (534)
T PLN02659 1 MQLHIS-PSLRHVTVLPG-KGVREFI-KVKVGSRRV-SYRMLFYSLLFFTFLLRFVFVLSTVDTIDGETKCST-LGCLGK 75 (534)
T ss_pred Cceeec-CccceEEEccC-ccHHHHH-HHHHhhcch-hhHHHHHHHHHHHHHhhhhheeehhccccccccccc-cccccc
Confidence 445555 58999999999 9999999 999999999 999999999999999999999999999999999999 999999
Q ss_pred c-----cccCCCchhHHHHHHHHHHHH-hhcCCCCCCCccccccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Q 012380 81 R-----IFSGSDTSLKLREELTRALIE-AKDGSGNGGGRIQGTLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQ 154 (465)
Q Consensus 81 ~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~ee~~~ 154 (465)
| +||++ ++.++++|++|+|.| ++.+|+|++.+ +|+||++++.+|++.+|||+++++|||||++++|||++
T Consensus 76 ~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~~---~~~~~~~~~~~~~~~~~d~~~~~~klr~~l~~~E~~~~ 151 (534)
T PLN02659 76 RLGPRILGRRL-DSANVPEVMYQVLEQPLSNDELKGRSD---IPQTLEEFMDEVKNSRSDARAFALKLREMVTLLEQRTR 151 (534)
T ss_pred ccCcccccCCC-cccccHHHHHHHHHhhhcccccCCccc---cchHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence 9 44554 555999999999999 99999999999 99999999999999999999999999999999999999
Q ss_pred HhhhhhHHHHHHhhcCCCccchhhhHHHHHHHHhchhhhcCCCCCccCCCCCCCCccEEEEEeCCccccchhhhHhhhcC
Q 012380 155 SSRQRESIYWHLASHGVPKSLHCLCLKLAEEYAVNAMARSRLPSPEYVSHLTDPSFHHVVLLTDNVLAASVVVSSTVQNS 234 (465)
Q Consensus 155 ~~~~~~~~~~~la~~~~Pk~~hcl~~rL~~e~~~~~~~~~~~~~~~~~~~l~d~~~ihIv~~sDn~la~sVvI~Siv~Ns 234 (465)
++|+|+.++.||||+|+|||+|||+||||+|||+++++++++|++|..|+|+||+++|+|++|||+||+||||||++.|+
T Consensus 152 ~~k~~~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d~~l~Hy~ifSdNvLAasVVvnStv~~a 231 (534)
T PLN02659 152 TAKIQEYLYRHVASSSIPKQLHCLALRLANEHSTNAAARLQLPLAELVPALVDNSYFHFVLASDNILAASVVANSLVQNA 231 (534)
T ss_pred HHHHHHHHHHHHHhhhCCCCccccchhhHHHHHhCchhhhccCCcccccccCCCCcceEEEEecceeEEEeeeehhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEeCCCCCcccchhhhhcccccchheecccccccccchhhhhHHHHHHHhhhHHHhhcccCcc---ccccc
Q 012380 235 ARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEMLEAHRLIWSHYYKNLKH---EDFEY 311 (465)
Q Consensus 235 ~~p~~i~FHIvtD~i~~~~m~~Wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~le~~~~i~~~y~~~~~~---~~i~~ 311 (465)
++|+++|||||||++||.+|++||.+|++++|+|||+|+|+|+||+.+|+||++|+++.+.++.+|+.+... .....
T Consensus 232 ~~p~~~VFHivTD~~ny~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~~~~pvl~ql~~~~~~~~~~~~~~~~~~~~~~~~ 311 (534)
T PLN02659 232 LRPHKFVLHIITDRKTYSPMQAWFSLHPLSPAIIEVKALHHFDWFAKGKVPVLEAMEKDQRVRSQFRGGSSAIVANNTEK 311 (534)
T ss_pred cCccceEEEEecCccccHHHHHHHhhCCCccceEEEEeehhcccccccccHHHHHHhhhhhhhhhhcccccccccccccC
Confidence 999999999999999999999999999999999999999999999999999999999988888777754321 11124
Q ss_pred chhhhhhhccCCCCccchhhhHHhhhccccCCCCcEEEEecceeeecChHHHHhcCCCCCeEEEEeccCCCCCCCCcccc
Q 012380 312 EGENRRCLEVLSPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKY 391 (465)
Q Consensus 312 p~~~~~~l~~~~~~~iS~~~y~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~iDL~gkvigAVeDc~~~~~~~~~~r~ 391 (465)
|.....+++.++|+|+|+++|+|||||++||+++||||||+|||||+||++||++||+|+++|||+||...+...+.+++
T Consensus 312 ~~~~~~~l~~~~p~ylS~~nY~RL~IPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~ 391 (534)
T PLN02659 312 PHVIAAKLQALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKL 391 (534)
T ss_pred ccccccccccCCccceeHHHHHHHHHHHHhhhcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHH
Confidence 44455678889999999999999999999999999999999999999999999999999999999999753222224678
Q ss_pred ccccccCccccccCCCCCCCccccceeeEehHHHHHhcHHHHHHHHHHhhc--ccccccccchhHHHHHhcCccC
Q 012380 392 KDYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLEH--FHQLCLLWMVTCILLILHGTWL 464 (465)
Q Consensus 392 ~~yLnfs~p~i~~~f~~~~cyFNSGVlLiDL~~WRk~nite~~~~~l~~n~--~~~l~~~~d~~~l~l~F~~rwl 464 (465)
++|+||++|.+..+|++++||||+|||+|||++||++++|+++++|++++. +..+|+++..|++|++|+|+|.
T Consensus 392 ~~yL~~s~p~i~~yFn~~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~~l~l~DQdaLp~~LivF~g~v~ 466 (534)
T PLN02659 392 KSYLNFSHPLIAKNFDPNECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKSDLSLWQLGTLPPGLIAFHGHVH 466 (534)
T ss_pred HHhhcccchhhhhccCccccceecceeEeeHHHHHhcChHHHHHHHHHhcccccccccccccchHHHHHhcCCEE
Confidence 889999999998899999999999999999999999999999999999984 3566776777889999999985
No 4
>PLN02829 Probable galacturonosyltransferase
Probab=100.00 E-value=4.3e-97 Score=785.03 Aligned_cols=359 Identities=38% Similarity=0.644 Sum_probs=329.5
Q ss_pred chhHHHHHH-------HHHHHHhh-cCCCCCCCccccccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 012380 88 TSLKLREEL-------TRALIEAK-DGSGNGGGRIQGTLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQSSRQR 159 (465)
Q Consensus 88 ~~~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~ee~~~~~~~~ 159 (465)
++..+.+|+ +|+|.|++ +.+||..+.. +.+.|++++++||+.+|||+++++|||+|++++|||+++||+|
T Consensus 206 ~~~~l~~el~~~i~e~~r~l~~a~~d~~lp~~~~~--~~~~m~~~i~~ak~~~~d~~~~~~KLr~~l~~~Ee~~~~~~~q 283 (639)
T PLN02829 206 ANPHFTRELRLRIKEVQRVLGDASKDSDLPKNANE--KLKAMEQTLAKGKQMQDDCSIVVKKLRAMLHSAEEQLRVHKKQ 283 (639)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhccCCCCCChhHHH--HHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555554 66667765 4688886664 7889999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhcCCCccchhhhHHHHHHHHhchhhhcCCCCCccCCCCCCCCccEEEEEeCCccccchhhhHhhhcCCCCCc
Q 012380 160 ESIYWHLASHGVPKSLHCLCLKLAEEYAVNAMARSRLPSPEYVSHLTDPSFHHVVLLTDNVLAASVVVSSTVQNSARPEK 239 (465)
Q Consensus 160 ~~~~~~la~~~~Pk~~hcl~~rL~~e~~~~~~~~~~~~~~~~~~~l~d~~~ihIv~~sDn~la~sVvI~Siv~Ns~~p~~ 239 (465)
++|++||||+|+|||+|||+||||+|||+++++++++|+++ +|+||+++|||++|||+||+||||||++.|+++|++
T Consensus 284 ~~~l~~laa~t~PK~lHCL~mrLt~Ey~~~~~~~~~~p~~~---~l~dp~l~Hy~ifSdNVLAasVVVnStv~na~~p~k 360 (639)
T PLN02829 284 TMFLTQLTAKTLPKGLHCLPLRLTTEYYNLNSSEQQFPNQE---KLEDPQLYHYALFSDNVLAAAVVVNSTVTNAKHPSK 360 (639)
T ss_pred HHHHHHHHhhhCCCCccccchhhHHHHHhCChhhccCCChh---hccCCccceEEEEecceeEEEeeeehhhhcccCccc
Confidence 99999999999999999999999999999999999998765 899999999999999999999999999999999999
Q ss_pred eEEEEEeCCCCCcccchhhhhcccccchheecccccccccchhhhhHHHHHHHhhhHHHhhcccCcccccccchhhhhhh
Q 012380 240 LVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEMLEAHRLIWSHYYKNLKHEDFEYEGENRRCL 319 (465)
Q Consensus 240 i~FHIvtD~i~~~~m~~Wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~le~~~~i~~~y~~~~~~~~i~~p~~~~~~l 319 (465)
+|||||||++||.+|++||.+||+++|+|||+|+|+|+|++.+|+||++|+++...++ +||...... ...++
T Consensus 361 ~VFHivTD~~ny~aM~~WF~~n~~~~A~v~V~nie~f~wln~~~~pvl~ql~~~~~~~-~yf~~~~~~-------~~~~~ 432 (639)
T PLN02829 361 HVFHIVTDRLNYAAMRMWFLVNPPGKATIQVQNIEEFTWLNSSYSPVLKQLGSQSMID-YYFRAHRAN-------SDSNL 432 (639)
T ss_pred eEEEEecCccchHHHHHHHhhCCCccceEEEEehhhcccccccccHHHHHhhhhhhhh-hhhhccccC-------ccccc
Confidence 9999999999999999999999999999999999999999999999999999887764 444332211 12457
Q ss_pred ccCCCCccchhhhHHhhhccccCCCCcEEEEecceeeecChHHHHhcCCCCCeEEEEeccCCCCCCCCccccccccccCc
Q 012380 320 EVLSPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSY 399 (465)
Q Consensus 320 ~~~~~~~iS~~~y~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~iDL~gkvigAVeDc~~~~~~~~~~r~~~yLnfs~ 399 (465)
++++|+|+|+++|+|||||++||+++||||||+||||++||++||++||+|+++|||+||... +++++.|++|++
T Consensus 433 k~r~p~ylS~lnY~RfyLPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~~-----f~r~~~~l~fs~ 507 (639)
T PLN02829 433 KYRNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGES-----FHRFDRYLNFSN 507 (639)
T ss_pred ccCCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEeccchhh-----hhhhhhhhhccc
Confidence 788999999999999999999999999999999999999999999999999999999999753 478889999999
Q ss_pred cccccCCCCCCCccccceeeEehHHHHHhcHHHHHHHHHHhhcccccccccchhHHHHHhcCccC
Q 012380 400 PIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLEHFHQLCLLWMVTCILLILHGTWL 464 (465)
Q Consensus 400 p~i~~~f~~~~cyFNSGVlLiDL~~WRk~nite~~~~~l~~n~~~~l~~~~d~~~l~l~F~~rwl 464 (465)
|.+..+|+++.||||+|||||||++||++++|++|++|++.|.++.+|++|.+||++|+|+|+|.
T Consensus 508 p~i~~~Fn~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~~r~L~dlgaLPp~Ll~F~g~i~ 572 (639)
T PLN02829 508 PLISKNFDPHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNHDRQLWKLGTLPPGLITFWKRTY 572 (639)
T ss_pred hHhhhccCCcccceecceEEEeHHHHHHhChHHHHHHHHHHccCCccccccCCChHHHHhcCceE
Confidence 99988999999999999999999999999999999999999999999999999999999999985
No 5
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=100.00 E-value=2e-96 Score=778.96 Aligned_cols=358 Identities=37% Similarity=0.609 Sum_probs=329.9
Q ss_pred HHHHHHHHHHhh-cCCCCCCCccccccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhcCC
Q 012380 93 REELTRALIEAK-DGSGNGGGRIQGTLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQSSRQRESIYWHLASHGV 171 (465)
Q Consensus 93 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~ee~~~~~~~~~~~~~~la~~~~ 171 (465)
++|.+|+|.|++ +.++|+.+.. +.+.|++++.+||+.+|||+++++|||+|++++|||++++|+|++|++||||+|+
T Consensus 232 i~e~~r~ls~a~~d~dlp~~~~~--k~~~M~~~l~~ak~~~~d~~~~~~KLraml~~~Ee~~~~~k~qs~~l~qlaa~t~ 309 (657)
T PLN02910 232 FRENKRAIGEATSDAELHSSALD--QAKAMGHVLSIAKDQLYDCHTMARKLRAMLQSTERKVDALKKKSAFLIQLAAKTV 309 (657)
T ss_pred HHHHHHHHhhcccccccCchHHH--HHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 356688888876 5699988765 7889999999999999999999999999999999999999999999999999999
Q ss_pred CccchhhhHHHHHHHHhchhhhcCCCCCccCCCCCCCCccEEEEEeCCccccchhhhHhhhcCCCCCceEEEEEeCCCCC
Q 012380 172 PKSLHCLCLKLAEEYAVNAMARSRLPSPEYVSHLTDPSFHHVVLLTDNVLAASVVVSSTVQNSARPEKLVFHIVTDKKTY 251 (465)
Q Consensus 172 Pk~~hcl~~rL~~e~~~~~~~~~~~~~~~~~~~l~d~~~ihIv~~sDn~la~sVvI~Siv~Ns~~p~~i~FHIvtD~i~~ 251 (465)
|||+|||+||||+|||+++++++++|+++ +|+||+++|||++|||+||+||||||++.|+++|+++|||||||++||
T Consensus 310 PK~lHCL~mRLt~Ey~~~~~~~~~~p~~~---~l~dp~l~Hy~ifSDNVLAaSVVVnSTv~na~~P~k~VFHiVTD~~ny 386 (657)
T PLN02910 310 PKPLHCLPLQLAADYFLLGFQNKDYVNKK---KLEDPSLYHYAIFSDNVLATSVVVNSTVLHAKEPQKHVFHIVTDKLNF 386 (657)
T ss_pred CCCccccchhhHHHHHhCchhhccCCChh---hccCCcceeEEEEecceeeEEeehhhhhhcccCccceEEEEecCcccc
Confidence 99999999999999999999999988764 999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhhcccccchheecccccccccchhhhhHHHHHHHhhhHHHhhcccCcccccccchhhhhhhccCCCCccchhh
Q 012380 252 TPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEMLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMN 331 (465)
Q Consensus 252 ~~m~~Wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~le~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~iS~~~ 331 (465)
.+|++||.+||+++|+|||+|+|+|+|++.+|+||++|+++...+ .+||........+ ....++++++|+|+|++|
T Consensus 387 ~aM~~WF~~n~~~~A~V~V~nie~f~wln~~~~pvl~qles~~~~-~~yf~~~~~~~~~---~~~~~~k~r~p~ylS~ln 462 (657)
T PLN02910 387 AAMKMWFIINPPAKATIQVENIDDFKWLNSSYCSVLRQLESARIK-EYYFKANHPSSLS---AGADNLKYRNPKYLSMLN 462 (657)
T ss_pred HHHHHHHhhCCCccceEEEeehhhcccccccccHHHHHHhhhhhh-hhhhhcccccccc---ccccccccCCcchhhHHH
Confidence 999999999999999999999999999999999999999998765 4555321111111 112467889999999999
Q ss_pred hHHhhhccccCCCCcEEEEecceeeecChHHHHhcCCCCCeEEEEeccCCCCCCCCccccccccccCccccccCCCCCCC
Q 012380 332 HLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHC 411 (465)
Q Consensus 332 y~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~iDL~gkvigAVeDc~~~~~~~~~~r~~~yLnfs~p~i~~~f~~~~c 411 (465)
|+|||||++||+++||||||+||||++||++||++||+|+++|||+||... +++++.|+||++|.++.+|++++|
T Consensus 463 Y~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~~~-----f~r~~~ylnfs~P~i~~yFNs~aC 537 (657)
T PLN02910 463 HLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCKES-----FHRFDKYLNFSNPKISENFDPNAC 537 (657)
T ss_pred HHHHHHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccchh-----hhhhhhhhccCChhhhhccCCCCc
Confidence 999999999999999999999999999999999999999999999999753 578889999999999889999999
Q ss_pred ccccceeeEehHHHHHhcHHHHHHHHHHhhcccccccccchhHHHHHhcCccC
Q 012380 412 AWLYGMNVLDLEAWRRTNITATYHKWLKLEHFHQLCLLWMVTCILLILHGTWL 464 (465)
Q Consensus 412 yFNSGVlLiDL~~WRk~nite~~~~~l~~n~~~~l~~~~d~~~l~l~F~~rwl 464 (465)
|||+|||||||++||++++|+.++.|++.|.+..+|+.|.+||++++|+|+|.
T Consensus 538 yfNsGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~dqgsLPpgLLvF~g~i~ 590 (657)
T PLN02910 538 GWAFGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITFYNLTY 590 (657)
T ss_pred eeecccEEEeHHHHHHhhHHHHHHHHHHhcccccccccCCCChHHHHHhCcee
Confidence 99999999999999999999999999999999999999999999999999985
No 6
>PLN02742 Probable galacturonosyltransferase
Probab=100.00 E-value=1.2e-94 Score=759.31 Aligned_cols=359 Identities=35% Similarity=0.593 Sum_probs=330.5
Q ss_pred HHHHHHHHHHhhc-CCCCCCCccccccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhcCC
Q 012380 93 REELTRALIEAKD-GSGNGGGRIQGTLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQSSRQRESIYWHLASHGV 171 (465)
Q Consensus 93 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~ee~~~~~~~~~~~~~~la~~~~ 171 (465)
++|.+|+|.|++. ++++.....+.+.++|++++.+||+.+|||+++++|||+|++++|||++++|+|++|++||||+|+
T Consensus 109 i~e~~~~l~~a~~d~~~~~~~~~~~~~~~m~~~i~~ak~~~~d~~~~~~klr~~l~~~e~~~~~~~~q~~~~~~laa~t~ 188 (534)
T PLN02742 109 IRNCQLLLSKAATRGEPITVEEAEPIIRDLAALIYQAQDLHYDSATTIMTLKAHIQALEERANAATVQSTKFGQLAAEAL 188 (534)
T ss_pred HHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 3556788888764 565321122237889999999999999999999999999999999999999999999999999999
Q ss_pred CccchhhhHHHHHHHHhchhhhcCCCCCccCCCCCCCCccEEEEEeCCccccchhhhHhhhcCCCCCceEEEEEeCCCCC
Q 012380 172 PKSLHCLCLKLAEEYAVNAMARSRLPSPEYVSHLTDPSFHHVVLLTDNVLAASVVVSSTVQNSARPEKLVFHIVTDKKTY 251 (465)
Q Consensus 172 Pk~~hcl~~rL~~e~~~~~~~~~~~~~~~~~~~l~d~~~ihIv~~sDn~la~sVvI~Siv~Ns~~p~~i~FHIvtD~i~~ 251 (465)
|||+|||+||||+|||++++++++.++++..|+|+||+++|||++|||++|++|||||++.|+++|+++|||||||+.++
T Consensus 189 PK~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d~~l~Hy~ifSdNvlAasvvvnStv~nsk~P~~~VFHiVTD~~n~ 268 (534)
T PLN02742 189 PKSLYCLGVRLTTEWFKNPKLQRKAEEKRNSPRLVDNNLYHFCVFSDNILATSVVVNSTVSNAKHPDQLVFHLVTDEVNY 268 (534)
T ss_pred CCCccccchHhHHHHHhCchhhhccccccccccccCCCcceEEEEeccchhhhhhhhhhHhhhcCCCcEEEEEeechhhH
Confidence 99999999999999999999988877778899999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhhcccccchheecccccccccchhhhhHHHHHHHhhhHHHhhcccCcccccccchhhhhhhccCCCCccchhh
Q 012380 252 TPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEMLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMN 331 (465)
Q Consensus 252 ~~m~~Wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~le~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~iS~~~ 331 (465)
.+|++||..|++++|+|+|+|+++|+|++.+++||++|+++. .++.+||.+.... -....++++|+|+|+++
T Consensus 269 ~aM~~WF~~n~~~~a~v~V~n~e~f~wl~~~~~pvl~ql~~~-~~~~~yf~~~~~~-------~~~~~k~r~p~y~s~~~ 340 (534)
T PLN02742 269 GAMQAWFAMNDFKGVTVEVQKIEEFSWLNASYVPVLKQLQDS-DTQSYYFSGSQDD-------GKTEIKFRNPKYLSMLN 340 (534)
T ss_pred HHHHHHHhhCCCCccEEEEEEeccccccccccchHHHHhhhh-hhhhhhccccccc-------ccccccccCcccccHHH
Confidence 999999999999999999999999999999999999999997 5678888654311 11235678899999999
Q ss_pred hHHhhhccccCCCCcEEEEecceeeecChHHHHhcCCCCCeEEEEeccCCCCCCCCccccccccccCccccccCCCCCCC
Q 012380 332 HLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHC 411 (465)
Q Consensus 332 y~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~iDL~gkvigAVeDc~~~~~~~~~~r~~~yLnfs~p~i~~~f~~~~c 411 (465)
|+|||||++||+++||||||+||||++||++||++||+|+++|||+||+.. +++|.+|+||++|.++.+|++++|
T Consensus 341 y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAVedC~~~-----f~ry~~yLnfS~p~i~~~f~~~aC 415 (534)
T PLN02742 341 HLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCLET-----FHRYHKYLNFSHPLISSHFDPDAC 415 (534)
T ss_pred HHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEeCchhhh-----hhhhhhhhcccchhhhccCCCCcc
Confidence 999999999999999999999999999999999999999999999999754 589999999999999999999999
Q ss_pred ccccceeeEehHHHHHhcHHHHHHHHHHhhcccccccccchhHHHHHhcCccC
Q 012380 412 AWLYGMNVLDLEAWRRTNITATYHKWLKLEHFHQLCLLWMVTCILLILHGTWL 464 (465)
Q Consensus 412 yFNSGVlLiDL~~WRk~nite~~~~~l~~n~~~~l~~~~d~~~l~l~F~~rwl 464 (465)
|||+|||||||++||++++|+.++.|++.|.+..+|+.|.+||++|+|+|+|.
T Consensus 416 ~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~gaLpp~LLaF~g~~~ 468 (534)
T PLN02742 416 GWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLPPGLLTFYGLTE 468 (534)
T ss_pred ccccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccccchHHHHHcCcce
Confidence 99999999999999999999999999999999999999999999999999985
No 7
>PLN02523 galacturonosyltransferase
Probab=100.00 E-value=2.6e-89 Score=719.76 Aligned_cols=336 Identities=35% Similarity=0.593 Sum_probs=307.3
Q ss_pred ccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhcCCCccchhhhHHHHHHHHhchhhhcCC
Q 012380 117 TLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQSSRQRESIYWHLASHGVPKSLHCLCLKLAEEYAVNAMARSRL 196 (465)
Q Consensus 117 ~~~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~ee~~~~~~~~~~~~~~la~~~~Pk~~hcl~~rL~~e~~~~~~~~~~~ 196 (465)
+.+.|++++.+||+ .|||.++++|||+|++++|||++++|+|++|++||||+|+|||+|||+||||+|||++++++++.
T Consensus 157 ~~k~~~~~~~~a~~-~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~ 235 (559)
T PLN02523 157 RVKVARQMIAESKE-SFDNQLKIQKLKDTIFAVNEQLTKAKKNGAFASLIAAKSIPKSLHCLAMRLMEERIAHPEKYKDE 235 (559)
T ss_pred HHHHHHHHHHHHHh-hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHhHHHHHhChHhhhcc
Confidence 45578899999997 89999999999999999999999999999999999999999999999999999999999887655
Q ss_pred CCCccCCCCCCCCccEEEEEeCCccccchhhhHhhhcCCCCCceEEEEEeCCCCCcccchhhhhcccccchheecccccc
Q 012380 197 PSPEYVSHLTDPSFHHVVLLTDNVLAASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQY 276 (465)
Q Consensus 197 ~~~~~~~~l~d~~~ihIv~~sDn~la~sVvI~Siv~Ns~~p~~i~FHIvtD~i~~~~m~~Wf~~n~~~~a~v~v~ni~~F 276 (465)
++ +..|+++||+++|||++|||++|++|+|+||+.|+++|++++||||||++++.+|++||.+|++++|+|+|++|++|
T Consensus 236 ~~-~~~~~l~dp~l~Hy~ifSdNvlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Iedf 314 (559)
T PLN02523 236 GK-PPPPELEDPSLYHYAIFSDNVIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVEDY 314 (559)
T ss_pred CC-CcchhccCCCcceEEEecCcchhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEeehh
Confidence 33 46789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhhHHHHHHHhhhHHHhhcccCcccccccchhhhhhhccCCCCccchhhhHHhhhccccCCCCcEEEEecceee
Q 012380 277 DWSQEVNVGVKEMLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVV 356 (465)
Q Consensus 277 ~wl~~~~~~vl~~le~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~iS~~~y~Rf~LPeifP~ldKVLYLD~DVVV 356 (465)
+|++.+++|+++|+++.+. +.+||.+... .. .....++++++|+|+|+++|+||||||+||+++||||||+||||
T Consensus 315 ~~ln~~~~pvlk~l~s~~~-~~~~f~~~~~-~~---~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~ldKVLYLD~DVVV 389 (559)
T PLN02523 315 KFLNSSYVPVLRQLESANL-QKFYFENKLE-NA---TKDSSNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVV 389 (559)
T ss_pred hhcccccchHHHhhhhhhh-hhhhcccccc-cc---ccccccccccCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEe
Confidence 9999999999999998655 4555543211 11 11224577788999999999999999999999999999999999
Q ss_pred ecChHHHHhcCCCCCeEEEEeccCCCCCCCCccccccccccCccccccCCCCCCCccccceeeEehHHHHHhcHHHHHHH
Q 012380 357 QHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHK 436 (465)
Q Consensus 357 q~DLseLw~iDL~gkvigAVeDc~~~~~~~~~~r~~~yLnfs~p~i~~~f~~~~cyFNSGVlLiDL~~WRk~nite~~~~ 436 (465)
|+||++||++||+|+++|||+||... ++++.+++||++|.++..|++++||||+|||||||++||++++|++++.
T Consensus 390 q~DLseLw~iDL~gkv~aAVeDc~~~-----~~r~~~~ln~s~p~i~~yFNs~aC~wnsGVmlINL~~WRe~nITek~~~ 464 (559)
T PLN02523 390 QKDLTGLWKIDMDGKVNGAVETCFGS-----FHRYAQYLNFSHPLIKEKFNPKACAWAYGMNIFDLDAWRREKCTEQYHY 464 (559)
T ss_pred cCCHHHHHhCcCCCceEEEehhhhhH-----HHHHHHhhcccchhhhhCcCCCcccccCCcEEEeHHHHHHhchHHHHHH
Confidence 99999999999999999999999643 4688899999999998899999999999999999999999999999999
Q ss_pred HHHhhcccccccccchhHHHHHhcCccC
Q 012380 437 WLKLEHFHQLCLLWMVTCILLILHGTWL 464 (465)
Q Consensus 437 ~l~~n~~~~l~~~~d~~~l~l~F~~rwl 464 (465)
|.+.+.+..+|+++.+||+|++|+|+|.
T Consensus 465 w~~ln~~~~l~DqdaLpp~LivF~gri~ 492 (559)
T PLN02523 465 WQNLNENRTLWKLGTLPPGLITFYSTTK 492 (559)
T ss_pred HHHhccccccccccccchHHHHhcCceE
Confidence 9999888999999999999999999985
No 8
>PLN02769 Probable galacturonosyltransferase
Probab=100.00 E-value=6.7e-89 Score=726.41 Aligned_cols=343 Identities=31% Similarity=0.469 Sum_probs=309.1
Q ss_pred HHHHHHHHHhh-cCCCCCCCccccccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhcCCC
Q 012380 94 EELTRALIEAK-DGSGNGGGRIQGTLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQSSRQRESIYWHLASHGVP 172 (465)
Q Consensus 94 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~ee~~~~~~~~~~~~~~la~~~~P 172 (465)
+|.+|+|.|++ +.++|+.... +.+.|++++.+||+.+|||+++++|||||++++|||++++++|++|++||||+|+|
T Consensus 218 ~e~~~~l~~~~~d~dlp~~~~~--~~~~m~~~~~~ak~~~~dc~~~~~klr~~l~~~E~~~~~~~kq~~~l~~laa~t~P 295 (629)
T PLN02769 218 QEHERVLSESITDADLPPFIQK--KLEKMEQTIARAKSCPVDCNNVDRKLRQILDMTEDEAHFHMKQSAFLYQLGVQTMP 295 (629)
T ss_pred HHHHHHHhhccccccCChhHHH--HHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 45577777765 4588877664 77899999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhHHHHHHHHhchhhhcCCCCCccCCCCCCCCccEEEEEeCCccccchhhhHhhhcCCCCCceEEEEEeCCCCCc
Q 012380 173 KSLHCLCLKLAEEYAVNAMARSRLPSPEYVSHLTDPSFHHVVLLTDNVLAASVVVSSTVQNSARPEKLVFHIVTDKKTYT 252 (465)
Q Consensus 173 k~~hcl~~rL~~e~~~~~~~~~~~~~~~~~~~l~d~~~ihIv~~sDn~la~sVvI~Siv~Ns~~p~~i~FHIvtD~i~~~ 252 (465)
||+|||+||||+|||+++++++++|++| +|+||+++|||++|||++|++|||||++.|+++|+++|||||||++++.
T Consensus 296 K~lHCL~mrLt~ey~~~~~~~~~~~~~~---~l~d~~l~Hy~ifSdNvlAasvvvNStv~na~~p~~~VFHiVTD~~n~~ 372 (629)
T PLN02769 296 KSHHCLSMRLTVEYFKSSSLDMEDSNSE---KFSDPSLRHYVIFSKNVLAASVVINSTVVHSRESGNIVFHVLTDAQNYY 372 (629)
T ss_pred CCccccchhhHHHHHhCchhhccCCchh---hccCCccceEEEEeccceeeeeehhhhhhhccCccceEEEEecChhhHH
Confidence 9999999999999999999999988764 9999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhhcccccchheecccccccccchhhhhHHHHHHHhhhHHHhhcccCcccccccchhhhhhhccCCCCccchhhh
Q 012380 253 PMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEMLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMNH 332 (465)
Q Consensus 253 ~m~~Wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~le~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~iS~~~y 332 (465)
+|++||.+|++++|+|||+|+|+|+|.+. ..++++|++..+.++.+|+++.. | ..+.++++|+|+++|
T Consensus 373 am~~WF~~n~~~~a~v~v~n~e~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~------~-----~~~~~~~eyiS~~nh 440 (629)
T PLN02769 373 AMKHWFDRNSYKEAAVQVLNIEDLILKDL-DKFALKQLSLPEEFRVSFRSVDN------P-----SSKQMRTEYLSVFSH 440 (629)
T ss_pred HHHHHHhcCCCccceEEEeeeeeeeeccc-chHHHHhhccchhhhhhhccCCC------C-----chhccCcccccHHHH
Confidence 99999999999999999999999999764 47888999988877666665421 1 134568999999999
Q ss_pred HHhhhccccCCCCcEEEEecceeeecChHHHHhcCCCCCeEEEEeccCCCCCCCCccccccccccCccccccCCCCCCCc
Q 012380 333 LRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCA 412 (465)
Q Consensus 333 ~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~iDL~gkvigAVeDc~~~~~~~~~~r~~~yLnfs~p~i~~~f~~~~cy 412 (465)
+|||||++||+++||||||+||||++||++||++||+|+++|||+||... .++++.|++ ..+|++++||
T Consensus 441 ~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~r-----l~~~~~yl~------~~~F~~~~Cy 509 (629)
T PLN02769 441 SHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGVR-----LGQLKNYLG------DTNFDTNSCA 509 (629)
T ss_pred HHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEehhhhhh-----hhhhhhhhc------ccCCCccccc
Confidence 99999999999999999999999999999999999999999999999643 344555554 3578999999
Q ss_pred cccceeeEehHHHHHhcHHHHHHHHHHhhcc--cccccccchhHHHHHhcCccC
Q 012380 413 WLYGMNVLDLEAWRRTNITATYHKWLKLEHF--HQLCLLWMVTCILLILHGTWL 464 (465)
Q Consensus 413 FNSGVlLiDL~~WRk~nite~~~~~l~~n~~--~~l~~~~d~~~l~l~F~~rwl 464 (465)
||+|||||||++||++++|+++++|++++.+ ..+|..+++|++|++|+|+|.
T Consensus 510 FNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~lnlvF~g~v~ 563 (629)
T PLN02769 510 WMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASLLTFQDLIY 563 (629)
T ss_pred cccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHHHHhcCeEE
Confidence 9999999999999999999999999988644 577888999999999999985
No 9
>PLN02718 Probable galacturonosyltransferase
Probab=100.00 E-value=2.5e-84 Score=688.87 Aligned_cols=336 Identities=34% Similarity=0.574 Sum_probs=306.2
Q ss_pred HHHHHHHHHHhhc-CCCCCCCccccccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhcCC
Q 012380 93 REELTRALIEAKD-GSGNGGGRIQGTLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQSSRQRESIYWHLASHGV 171 (465)
Q Consensus 93 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~ee~~~~~~~~~~~~~~la~~~~ 171 (465)
++|++|+|.|++. .++|+.... +...|++++.+||+.+|||+++++|||||++++|||++++|+|++|++||||+|+
T Consensus 200 i~e~~~~l~~~~~d~~lp~~~~~--~~~~m~~~~~~a~~~~~d~~~~~~klr~~~~~~e~~~~~~~~q~~~~~~laa~~~ 277 (603)
T PLN02718 200 TKELERAVGDATKDKDLSKSALQ--RMKSMEVTLYKASRVFPNCPAIATKLRAMTYNTEEQVRAQKNQAAYLMQLAARTT 277 (603)
T ss_pred HHHHHHHHhcccCCCCCCHhHHH--HHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 4556777777763 477777664 6778899999999999999999999999999999999999999999999999999
Q ss_pred CccchhhhHHHHHHHHhchhhhcCCCCCccCCCCCCCCccEEEEEeCCccccchhhhHhhhcCCCCCceEEEEEeCCCCC
Q 012380 172 PKSLHCLCLKLAEEYAVNAMARSRLPSPEYVSHLTDPSFHHVVLLTDNVLAASVVVSSTVQNSARPEKLVFHIVTDKKTY 251 (465)
Q Consensus 172 Pk~~hcl~~rL~~e~~~~~~~~~~~~~~~~~~~l~d~~~ihIv~~sDn~la~sVvI~Siv~Ns~~p~~i~FHIvtD~i~~ 251 (465)
|||+|||+||||+|||+++++++++|+++ +|+||+++|||+++||++++||+|+|++.|+++|++++|||+||++++
T Consensus 278 PK~lhCL~~rLt~ey~~~~~~~~~~~~~~---~l~d~~~~Hia~~sDNvlaasVvInSil~Ns~np~~ivFHVvTD~is~ 354 (603)
T PLN02718 278 PKGLHCLSMRLTAEYFALDPEKRQLPNQQ---RYNDPDLYHYVVFSDNVLACSVVVNSTISSSKEPEKIVFHVVTDSLNY 354 (603)
T ss_pred CCCccccchhhHHHHhhCChhhccCCChh---hccCCcceeEEEEcCCceeEEEEhhhhhhccCCCCcEEEEEEeCCCCH
Confidence 99999999999999999999999988764 999999999999999999999999999999998899999999999999
Q ss_pred cccchhhhhcccccchheecccccccccchhhhhHHHHHHHhhhHHHhhcccCcccccccchhhhhhhccCCCCccchhh
Q 012380 252 TPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEMLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMN 331 (465)
Q Consensus 252 ~~m~~Wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~le~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~iS~~~ 331 (465)
++|+.||..++..+++|+|.++++|.|++.++++++.+ ++..+++|+|+++
T Consensus 355 ~~mk~wf~l~~~~~a~I~V~~Iddf~~lp~~~~~~lk~-----------------------------l~s~~~~~~S~~~ 405 (603)
T PLN02718 355 PAISMWFLLNPPGKATIQILNIDDMNVLPADYNSLLMK-----------------------------QNSHDPRYISALN 405 (603)
T ss_pred HHHHHHHHhCCCCCcEEEEEecchhccccccchhhhhh-----------------------------ccccccccccHHH
Confidence 99999999999889999999999999998776655432 1224568999999
Q ss_pred hHHhhhccccCCCCcEEEEecceeeecChHHHHhcCCCCCeEEEEeccCCCCCCCCccccccccccCccccccCCCCCCC
Q 012380 332 HLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHC 411 (465)
Q Consensus 332 y~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~iDL~gkvigAVeDc~~~~~~~~~~r~~~yLnfs~p~i~~~f~~~~c 411 (465)
|+|||||++||+++||||||+||||++||++||++||+|+++|||+||..... .+++++.|+||++|.+.++|++++|
T Consensus 406 y~Rl~ipellp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~--~~~~~~~~lnfs~p~i~~~fn~~~C 483 (603)
T PLN02718 406 HARFYLPDIFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEP--SFRSMDTFINFSDPWVAKKFDPKAC 483 (603)
T ss_pred HHHHHHHHHhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEecccccccc--chhhhhhhhhccchhhhcccCCCcc
Confidence 99999999999999999999999999999999999999999999999975321 1356677899999999889999999
Q ss_pred ccccceeeEehHHHHHhcHHHHHHHHHHhhcccccccccchhHHHHHhcCccC
Q 012380 412 AWLYGMNVLDLEAWRRTNITATYHKWLKLEHFHQLCLLWMVTCILLILHGTWL 464 (465)
Q Consensus 412 yFNSGVlLiDL~~WRk~nite~~~~~l~~n~~~~l~~~~d~~~l~l~F~~rwl 464 (465)
|||+|||||||++||++++|+++++|++++.++.+|+++.+||+|++|+|+|.
T Consensus 484 yfNsGVlLIDLk~WReenITe~~~~~l~~n~~~~l~dqdaLpp~LlvF~gri~ 536 (603)
T PLN02718 484 TWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVKRPLWKAGSLPIGWLTFYNQTV 536 (603)
T ss_pred ccccceEEEeHHHHHhcChHHHHHHHHHhccCccccCcccccHHHHHhcCcee
Confidence 99999999999999999999999999999988899999999999999999986
No 10
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=1.7e-45 Score=363.57 Aligned_cols=201 Identities=42% Similarity=0.728 Sum_probs=181.7
Q ss_pred cEEEEEeCCccccchhhhHhhhcCCCCCceEEEEEeCCCCCcccchhhhhcccccchheecccccccccchhhhhHHHHH
Q 012380 211 HHVVLLTDNVLAASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEML 290 (465)
Q Consensus 211 ihIv~~sDn~la~sVvI~Siv~Ns~~p~~i~FHIvtD~i~~~~m~~Wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~l 290 (465)
+|||+++||+++++|+++|++.|+++|.+++|||+||++++++|+.||..++..++.|+|.+++++.|.+....++++|+
T Consensus 1 ~hiv~~~Dn~l~~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~ 80 (257)
T cd06429 1 IHVVIFSDNRLAAAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLMQL 80 (257)
T ss_pred CCEEEEecchhHHHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhhhh
Confidence 69999999999999999999999999999999999999999999999999999899999999999988776666666766
Q ss_pred HHhhhHHHhhcccCcccccccchhhhhhhccCCCCccchhhhHHhhhccccCCCCcEEEEecceeeecChHHHHhcCCCC
Q 012380 291 EAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNG 370 (465)
Q Consensus 291 e~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~iS~~~y~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~iDL~g 370 (465)
++.. ....++.++++++|.++|+||+||++||+++||||||+|+||++||++||++||+|
T Consensus 81 ~~~~--------------------~~~~~~~~~~~~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~ 140 (257)
T cd06429 81 ESEA--------------------DTSNLKQRKPEYISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGG 140 (257)
T ss_pred hccc--------------------cccccccCCccccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCC
Confidence 5432 01235567889999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeccCCCCCCCCccccccccccCccccccCCCCCCCccccceeeEehHHHHHhcHHHHHHHHHHhhccc--cccc
Q 012380 371 KVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLEHFH--QLCL 448 (465)
Q Consensus 371 kvigAVeDc~~~~~~~~~~r~~~yLnfs~p~i~~~f~~~~cyFNSGVlLiDL~~WRk~nite~~~~~l~~n~~~--~l~~ 448 (465)
+++|||+| |||||||||||++||++++++++++|++++.++ .++.
T Consensus 141 ~~~aav~d---------------------------------yfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~ 187 (257)
T cd06429 141 GVAGAVET---------------------------------SWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWK 187 (257)
T ss_pred CEEEEEhh---------------------------------hcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhh
Confidence 99999987 588999999999999999999999999998764 5677
Q ss_pred ccchhHHHHHhcCccC
Q 012380 449 LWMVTCILLILHGTWL 464 (465)
Q Consensus 449 ~~d~~~l~l~F~~rwl 464 (465)
.++|+++|++|+|+|.
T Consensus 188 ~~dqd~ln~~~~~~~~ 203 (257)
T cd06429 188 LITLPPGLIVFYGLTS 203 (257)
T ss_pred cCCccHHHHHccCeeE
Confidence 8899999999999985
No 11
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=100.00 E-value=6.2e-34 Score=290.78 Aligned_cols=204 Identities=19% Similarity=0.264 Sum_probs=142.9
Q ss_pred CCccEEEEEeCCccc--cchhhhHhhhcCCCCCceEEEEEeCCCCCcccchhhhhcccccchheecccccccccchhhhh
Q 012380 208 PSFHHVVLLTDNVLA--ASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVG 285 (465)
Q Consensus 208 ~~~ihIv~~sDn~la--~sVvI~Siv~Ns~~p~~i~FHIvtD~i~~~~m~~Wf~~n~~~~a~v~v~ni~~F~wl~~~~~~ 285 (465)
++.+|||+++|+.|+ ++|+|+|++.|+++ ..+.|||++|+++.+..+.
T Consensus 23 ~~~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~-~~~~f~Il~~~is~e~~~~----------------------------- 72 (334)
T PRK15171 23 KNSLDIAYGIDKNFLFGCGVSIASVLLNNPD-KSLVFHVFTDYISDADKQR----------------------------- 72 (334)
T ss_pred CCceeEEEECcHhhHHHHHHHHHHHHHhCCC-CCEEEEEEeCCCCHHHHHH-----------------------------
Confidence 468999999998665 99999999999876 5799999999998543111
Q ss_pred HHHHHHHhhhHHHhhcccCcccccccchhhhhhhccCCCCccchhhhHHhhhccccC-CCCcEEEEecceeeecChHHHH
Q 012380 286 VKEMLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMNHLRIYIPELFP-DLNKILFLDDDVVVQHDLSSLL 364 (465)
Q Consensus 286 vl~~le~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~iS~~~y~Rf~LPeifP-~ldKVLYLD~DVVVq~DLseLw 364 (465)
++++. ..|..+.....++ .+.+ .. .+...++|.++|+||++|++|| +++||||||+|+||++||++||
T Consensus 73 -l~~l~------~~~~~~i~~~~id-~~~~-~~--~~~~~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~ 141 (334)
T PRK15171 73 -FSALA------KQYNTRINIYLIN-CERL-KS--LPSTKNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELI 141 (334)
T ss_pred -HHHHH------HhcCCeEEEEEeC-HHHH-hC--CcccCcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHH
Confidence 11110 1111100011111 1111 11 1234689999999999999999 7999999999999999999999
Q ss_pred hcCCCCCeEEEEe-ccCCCCCCCCccccccccccCccccccCCCCCCCccccceeeEehHHHHHhcHHHHHHHHHHhhcc
Q 012380 365 ELDLNGKVVGAVV-GSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLEHF 443 (465)
Q Consensus 365 ~iDL~gkvigAVe-Dc~~~~~~~~~~r~~~yLnfs~p~i~~~f~~~~cyFNSGVlLiDL~~WRk~nite~~~~~l~~n~~ 443 (465)
++||+|+.+|||. |+... . .......++ .| ++ ..+|||||||||||++||+++++++++++++++..
T Consensus 142 ~~dl~~~~~aav~~d~~~~-~---~~~~~~~l~--~~----~~--~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~ 209 (334)
T PRK15171 142 DLDFAENEIAAVVAEGDAE-W---WSKRAQSLQ--TP----GL--ASGYFNSGFLLINIPAWAQENISAKAIEMLADPEI 209 (334)
T ss_pred hccCCCCeEEEEEeccchh-H---HHHHHHhcC--Cc----cc--cccceecceEEEcHHHHHHhhHHHHHHHHHhcccc
Confidence 9999977667664 44211 0 011111122 11 11 24699999999999999999999999999997642
Q ss_pred cccccccchhHHHHHhcCccC
Q 012380 444 HQLCLLWMVTCILLILHGTWL 464 (465)
Q Consensus 444 ~~l~~~~d~~~l~l~F~~rwl 464 (465)
...+..+||+++|++|+|+|.
T Consensus 210 ~~~~~~~DQDiLN~~~~~~~~ 230 (334)
T PRK15171 210 VSRITHLDQDVLNILLAGKVK 230 (334)
T ss_pred ccceeecChhHHHHHHcCCeE
Confidence 222345789999999999985
No 12
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=99.97 E-value=8.6e-32 Score=262.41 Aligned_cols=197 Identities=17% Similarity=0.194 Sum_probs=140.1
Q ss_pred cEEEEEeCC-ccc--cchhhhHhhhcCCCCCceEEEEEeCCCCCcccchhhhhcccccchheecccccccccchhhhhHH
Q 012380 211 HHVVLLTDN-VLA--ASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVK 287 (465)
Q Consensus 211 ihIv~~sDn-~la--~sVvI~Siv~Ns~~p~~i~FHIvtD~i~~~~m~~Wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl 287 (465)
|||++.+++ .|+ ++|+++|+++|+++ .++|||++++++.+..+..
T Consensus 1 ~~i~~~a~d~~y~~~~~v~i~Sl~~~~~~--~~~~~il~~~is~~~~~~L------------------------------ 48 (246)
T cd00505 1 IAIVIVATGDEYLRGAIVLMKSVLRHRTK--PLRFHVLTNPLSDTFKAAL------------------------------ 48 (246)
T ss_pred CeEEEEecCcchhHHHHHHHHHHHHhCCC--CeEEEEEEccccHHHHHHH------------------------------
Confidence 688766554 555 89999999999986 6999999999885421111
Q ss_pred HHHHHhhhHHHhhcccCcccccccchhhhhhhccCCCCccchhhhHHhhhccccCCCCcEEEEecceeeecChHHHHhcC
Q 012380 288 EMLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELD 367 (465)
Q Consensus 288 ~~le~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~iS~~~y~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~iD 367 (465)
+.+.........++ .++.+. + ..... ..++++..+|+||++|+++|+++||||||+|+||++||++||++|
T Consensus 49 ~~~~~~~~~~i~~~------~~~~~~-~-~~~~~-~~~~~~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~~~~ 119 (246)
T cd00505 49 DNLRKLYNFNYELI------PVDILD-S-VDSEH-LKRPIKIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTP 119 (246)
T ss_pred HHHHhccCceEEEE------eccccC-c-chhhh-hcCccccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHhhcc
Confidence 00000000001111 111110 0 00111 136789999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeccCCCCCCCCccccccccccCccccccCCCCCCCccccceeeEehHHHHHhcHHHHHHHHHHhhcccccc
Q 012380 368 LNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLEHFHQLC 447 (465)
Q Consensus 368 L~gkvigAVeDc~~~~~~~~~~r~~~yLnfs~p~i~~~f~~~~cyFNSGVlLiDL~~WRk~nite~~~~~l~~n~~~~l~ 447 (465)
++|+++|||+||..... .+.++. ..+...+.+|||||||||||++||++++.++.+++..++..+.
T Consensus 120 l~~~~~aav~d~~~~~~---~~~~~~---------~~~~~~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~~~~~-- 185 (246)
T cd00505 120 LGGQELAAAPDPGDRRE---GKYYRQ---------KRSHLAGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQSLSSL-- 185 (246)
T ss_pred CCCCeEEEccCchhhhc---cchhhc---------ccCCCCCCCceeeeeEEEechHHHHHHHHHHHHHHHHhhcccC--
Confidence 99999999999974310 011111 1123445789999999999999999999999888877765543
Q ss_pred cccchhHHHHHhcCc
Q 012380 448 LLWMVTCILLILHGT 462 (465)
Q Consensus 448 ~~~d~~~l~l~F~~r 462 (465)
..+||+++|.+|+++
T Consensus 186 ~~~DQd~LN~~~~~~ 200 (246)
T cd00505 186 SGGDQDLLNTFFKQV 200 (246)
T ss_pred ccCCcHHHHHHHhcC
Confidence 568899999999998
No 13
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=99.97 E-value=6.8e-31 Score=255.35 Aligned_cols=199 Identities=22% Similarity=0.336 Sum_probs=146.6
Q ss_pred cEEEEEeCCccc--cchhhhHhhhcCCCCCceEEEEEeCCCCCcccchhhhhcccccchheecccccccccchhhhhHHH
Q 012380 211 HHVVLLTDNVLA--ASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKE 288 (465)
Q Consensus 211 ihIv~~sDn~la--~sVvI~Siv~Ns~~p~~i~FHIvtD~i~~~~m~~Wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~ 288 (465)
+|||+++|+.+. ++|+++|+++|+++ +.++|||++++++.+..+ . ++
T Consensus 1 ~~I~~~~d~~y~~~~~~~l~Sl~~~~~~-~~~~~~il~~~is~~~~~-~-----------------------------L~ 49 (248)
T cd04194 1 MNIVFAIDDNYAPYLAVTIKSILANNSK-RDYDFYILNDDISEENKK-K-----------------------------LK 49 (248)
T ss_pred CCEEEEecHhhHHHHHHHHHHHHhcCCC-CceEEEEEeCCCCHHHHH-H-----------------------------HH
Confidence 699999997543 89999999999986 579999999998753211 0 00
Q ss_pred HHHHhhhHHHhhcccCcccccccchhhhhhhccCCCCccchhhhHHhhhccccCCCCcEEEEecceeeecChHHHHhcCC
Q 012380 289 MLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDL 368 (465)
Q Consensus 289 ~le~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~iS~~~y~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~iDL 368 (465)
.+. ..+........++.+. +. ... ...++++..+|+||++|+++|+++||||||+|+||++||++||++|+
T Consensus 50 ~~~------~~~~~~i~~~~i~~~~-~~-~~~-~~~~~~~~~~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~ 120 (248)
T cd04194 50 ELL------KKYNSSIEFIKIDNDD-FK-FFP-ATTDHISYATYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDL 120 (248)
T ss_pred HHH------HhcCCeEEEEEcCHHH-Hh-cCC-cccccccHHHHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCc
Confidence 000 0000000001111110 10 010 03467899999999999999999999999999999999999999999
Q ss_pred CCCeEEEEeccCCCCCCCCccccccccccCccccccCCCCCCCccccceeeEehHHHHHhcHHHHHHHHHHhhccccccc
Q 012380 369 NGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLEHFHQLCL 448 (465)
Q Consensus 369 ~gkvigAVeDc~~~~~~~~~~r~~~yLnfs~p~i~~~f~~~~cyFNSGVlLiDL~~WRk~nite~~~~~l~~n~~~~l~~ 448 (465)
+|+++|||.||.... ..... ...+..+..+||||||||+|+++||++++++++++|++++..+ +.
T Consensus 121 ~~~~~aa~~d~~~~~-----~~~~~--------~~~~~~~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~~~--~~ 185 (248)
T cd04194 121 GDNLLAAVRDPFIEQ-----EKKRK--------RRLGGYDDGSYFNSGVLLINLKKWREENITEKLLELIKEYGGR--LI 185 (248)
T ss_pred CCCEEEEEecccHHH-----HHHHH--------hhcCCCcccceeeecchheeHHHHHHhhhHHHHHHHHHhCCCc--ee
Confidence 999999999997431 00000 0123445678999999999999999999999999999998753 35
Q ss_pred ccchhHHHHHhcCccC
Q 012380 449 LWMVTCILLILHGTWL 464 (465)
Q Consensus 449 ~~d~~~l~l~F~~rwl 464 (465)
.+||+++|++|+|+|.
T Consensus 186 ~~DQd~LN~~~~~~~~ 201 (248)
T cd04194 186 YPDQDILNAVLKDKIL 201 (248)
T ss_pred eCChHHHHHHHhCCeE
Confidence 7899999999999985
No 14
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.97 E-value=2.5e-30 Score=262.63 Aligned_cols=199 Identities=21% Similarity=0.207 Sum_probs=148.5
Q ss_pred ccEEEEEeCCccc--cchhhhHhhhcCCCCCceEEEEEeCCCCCcccchhhhhcccccchheecccccccccchhhhhHH
Q 012380 210 FHHVVLLTDNVLA--ASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVK 287 (465)
Q Consensus 210 ~ihIv~~sDn~la--~sVvI~Siv~Ns~~p~~i~FHIvtD~i~~~~m~~Wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl 287 (465)
.++||+++|++|+ ++|+|.|++.|++. -.+.|||++|+++.+ |+.. ++. .+++|.
T Consensus 2 ~~~Iv~a~D~nY~~~~gvsI~SiL~~n~~-~~~~fhil~~~i~~e----~~~~--l~~------~~~~f~---------- 58 (325)
T COG1442 2 TIPIAFAFDKNYLIPAGVSIYSLLEHNRK-IFYKFHILVDGLNEE----DKKK--LNE------TAEPFK---------- 58 (325)
T ss_pred cccEEEEcccccchhHHHHHHHHHHhCcc-ccEEEEEEecCCCHH----HHHH--HHH------HHHhhc----------
Confidence 5799999998776 99999999999996 469999999999854 3321 000 001111
Q ss_pred HHHHHhhhHHHhhcccCcccccccchhhhhhhc-cC-CCCccchhhhHHhhhccccCCCCcEEEEecceeeecChHHHHh
Q 012380 288 EMLEAHRLIWSHYYKNLKHEDFEYEGENRRCLE-VL-SPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLE 365 (465)
Q Consensus 288 ~~le~~~~i~~~y~~~~~~~~i~~p~~~~~~l~-~~-~~~~iS~~~y~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~ 365 (465)
.......++. +.++ .. .++++|.++|+||++|++||+.+|+||||+||||.|||++||.
T Consensus 59 --------------~~i~~~~id~-----~~~~~~~~~~~~~s~~v~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~lf~ 119 (325)
T COG1442 59 --------------SFIVLEVIDI-----EPFLDYPPFTKRFSKMVLVRYFLADLFPQYDKMLYLDVDVIFCGDLSELFF 119 (325)
T ss_pred --------------cceeeEEEec-----hhhhcccccccchHHHHHHHHHHHHhccccCeEEEEecCEEEcCcHHHHHh
Confidence 0000001110 1122 12 4578999999999999999988999999999999999999999
Q ss_pred cCCCCCeEEEEeccCCCCCCCCccccccccccCccccccCCCCCCCccccceeeEehHHHHHhcHHHHHHHHHHhhcccc
Q 012380 366 LDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLEHFHQ 445 (465)
Q Consensus 366 iDL~gkvigAVeDc~~~~~~~~~~r~~~yLnfs~p~i~~~f~~~~cyFNSGVlLiDL~~WRk~nite~~~~~l~~n~~~~ 445 (465)
+|++|+++|||.|+..... .++ .. ......-.+.|||+||+++|++.||++++++++++++++..+..
T Consensus 120 ~~~~~~~~aaV~D~~~~~~---~~~----~~-----~~~~~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~~~~ 187 (325)
T COG1442 120 IDLEEYYLAAVRDVFSHYM---KEG----AL-----RLEKGDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDKENDL 187 (325)
T ss_pred cCCCcceEEEEeehhhhhh---hhh----hh-----HhhhcccccccCccceeeehHHHHHHhhhHHHHHHHHhcccccc
Confidence 9999999999999864310 010 00 00112234679999999999999999999999999998877544
Q ss_pred cccccchhHHHHHhcCccC
Q 012380 446 LCLLWMVTCILLILHGTWL 464 (465)
Q Consensus 446 l~~~~d~~~l~l~F~~rwl 464 (465)
..+||+++|++|+|+|+
T Consensus 188 --~~~DQdiLN~i~~~~~~ 204 (325)
T COG1442 188 --LYPDQDILNMIFEDRVL 204 (325)
T ss_pred --CCccccHHHHHHHhhhh
Confidence 46788899999999996
No 15
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=99.97 E-value=2.1e-30 Score=259.07 Aligned_cols=198 Identities=20% Similarity=0.261 Sum_probs=131.0
Q ss_pred EEEEEeCCccc-cchhhhHhhhcCCCCCceEEEEEeCCCCCcccchhhhhcccccchheecccccccccchhhhhHHHHH
Q 012380 212 HVVLLTDNVLA-ASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEML 290 (465)
Q Consensus 212 hIv~~sDn~la-~sVvI~Siv~Ns~~p~~i~FHIvtD~i~~~~m~~Wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~l 290 (465)
-||++.+|+.. ++|+|+|++.|+. ..++|||++|+++.+..+.....-...+..|
T Consensus 4 ~iv~~~~~y~~~~~~~i~Sil~n~~--~~~~fhii~d~~s~~~~~~l~~~~~~~~~~i---------------------- 59 (280)
T cd06431 4 AIVCAGYNASRDVVTLVKSVLFYRR--NPLHFHLITDEIARRILATLFQTWMVPAVEV---------------------- 59 (280)
T ss_pred EEEEccCCcHHHHHHHHHHHHHcCC--CCEEEEEEECCcCHHHHHHHHHhccccCcEE----------------------
Confidence 36777755443 8999999999985 4599999999998654333221100011111
Q ss_pred HHhhhHHHhhcccCcccccccchhhhhhhccCCCCccchh-hhHHhhhccccC-CCCcEEEEecceeeecChHHHHhc--
Q 012380 291 EAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLM-NHLRIYIPELFP-DLNKILFLDDDVVVQHDLSSLLEL-- 366 (465)
Q Consensus 291 e~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~iS~~-~y~Rf~LPeifP-~ldKVLYLD~DVVVq~DLseLw~i-- 366 (465)
.++. + ..+...+......++|.. +|+||+||++|| +++||||||+|+||++||++||++
T Consensus 60 --------~f~~------i---~~~~~~~~~~~~~~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~ 122 (280)
T cd06431 60 --------SFYN------A---EELKSRVSWIPNKHYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFH 122 (280)
T ss_pred --------EEEE------h---HHhhhhhccCcccchhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhh
Confidence 1111 0 000111111112355544 889999999999 799999999999999999999999
Q ss_pred CCCC-CeEEEEeccCCCCCCCCcccccccc-ccCccccccCCCCCCCccccceeeEehHHHHHhcHHHHHHHHHHhhcc-
Q 012380 367 DLNG-KVVGAVVGSSCGDNCCPGRKYKDYL-NFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLEHF- 443 (465)
Q Consensus 367 DL~g-kvigAVeDc~~~~~~~~~~r~~~yL-nfs~p~i~~~f~~~~cyFNSGVlLiDL~~WRk~nite~~~~~l~~n~~- 443 (465)
|++| +++|||+|.... +.... ....| +.....|||||||||||++||++++++++....+++..
T Consensus 123 ~~~~~~~~a~v~~~~~~--------~~~~~~~~~~~-----~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~ 189 (280)
T cd06431 123 KFTGQQVLGLVENQSDW--------YLGNLWKNHRP-----WPALGRGFNTGVILLDLDKLRKMKWESMWRLTAERELMS 189 (280)
T ss_pred hcCCCcEEEEeccchhh--------hhhhhhhccCC-----CcccccceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhh
Confidence 7866 577777764211 11110 00011 11123599999999999999999999998877766532
Q ss_pred cccccccchhHHHHHhcCcc
Q 012380 444 HQLCLLWMVTCILLILHGTW 463 (465)
Q Consensus 444 ~~l~~~~d~~~l~l~F~~rw 463 (465)
..-...+||+++|++|+|+|
T Consensus 190 ~~~~~~~DQDiLN~v~~~~~ 209 (280)
T cd06431 190 MLSTSLADQDIFNAVIKQNP 209 (280)
T ss_pred cCCCCcCcHHHHHHHHcCCc
Confidence 22235799999999999995
No 16
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=99.97 E-value=5.8e-30 Score=251.73 Aligned_cols=203 Identities=13% Similarity=0.212 Sum_probs=132.2
Q ss_pred cEEE-EEeCCccc--cchhhhHhhhcCCCCCceEEEEEeCCCCCcccchhhhhcccccchheecccccccccchhhhhHH
Q 012380 211 HHVV-LLTDNVLA--ASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVK 287 (465)
Q Consensus 211 ihIv-~~sDn~la--~sVvI~Siv~Ns~~p~~i~FHIvtD~i~~~~m~~Wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl 287 (465)
|||+ +++|+.|+ ++|++.|+++|++ .++.|||++|+++.+. +.. +
T Consensus 1 ini~~~~~~~~y~~~~~v~l~Sll~nn~--~~~~fyil~~~is~e~-~~~-----------------------------l 48 (248)
T cd06432 1 INIFSVASGHLYERFLRIMMLSVMKNTK--SPVKFWFIKNFLSPQF-KEF-----------------------------L 48 (248)
T ss_pred CeEEEEcCcHHHHHHHHHHHHHHHHcCC--CCEEEEEEeCCCCHHH-HHH-----------------------------H
Confidence 4664 45556665 8999999999985 5799999999998532 111 1
Q ss_pred HHHHHhhhHHHhhcccCcccccccchhhhhhhccCCCCccchhhhHHhhhccccC-CCCcEEEEecceeeecChHHHHhc
Q 012380 288 EMLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMNHLRIYIPELFP-DLNKILFLDDDVVVQHDLSSLLEL 366 (465)
Q Consensus 288 ~~le~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~iS~~~y~Rf~LPeifP-~ldKVLYLD~DVVVq~DLseLw~i 366 (465)
+++. ..|......+.++.|..+.. . ....+ +..+|.|++++++|| +++||||||+|+||.+||++||++
T Consensus 49 ~~~~------~~~~~~i~~i~i~~~~~~~~-~--~~~~~-~~~~y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~ 118 (248)
T cd06432 49 PEMA------KEYGFEYELVTYKWPRWLHK-Q--TEKQR-IIWGYKILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDM 118 (248)
T ss_pred HHHH------HHhCCceEEEEecChhhhhc-c--cccch-hHHHHHHHHHHHhhhhccCEEEEEcCCceecccHHHHHhc
Confidence 1111 11111111111222221111 0 11111 356799999999999 799999999999999999999999
Q ss_pred CCCCCeEEEEeccCCCCCCCCccccccccccCccccccCCCCCCCccccceeeEehHHHHHhcHHHHHHHHHH---hhcc
Q 012380 367 DLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLK---LEHF 443 (465)
Q Consensus 367 DL~gkvigAVeDc~~~~~~~~~~r~~~yLnfs~p~i~~~f~~~~cyFNSGVlLiDL~~WRk~nite~~~~~l~---~n~~ 443 (465)
||+|+++|||+||..... ....++. +.++. ..++ ....|||||||+|||++||++++++++.++++ ++..
T Consensus 119 dl~~~~~Aav~d~~~~~~-~~~~~~~-~~~~~----~~~l-~~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l~~~~~ 191 (248)
T cd06432 119 DLKGAPYGYTPFCDSRKE-MDGFRFW-KQGYW----KSHL-RGRPYHISALYVVDLKRFRRIAAGDRLRGQYQQLSQDPN 191 (248)
T ss_pred CcCCCeEEEeeccccchh-cccchhh-hhhhh----hhhc-CCCCccceeeEEEeHHHHHHHhHHHHHHHHHHHHhcCCC
Confidence 999999999999864210 0000110 00100 1122 24569999999999999999999997776665 4443
Q ss_pred cccccccchhHHHHHhcCc-cC
Q 012380 444 HQLCLLWMVTCILLILHGT-WL 464 (465)
Q Consensus 444 ~~l~~~~d~~~l~l~F~~r-wl 464 (465)
+. ...||+++|++++++ |+
T Consensus 192 ~l--~~~DQDiLN~v~~~~~i~ 211 (248)
T cd06432 192 SL--ANLDQDLPNNMQHQVPIF 211 (248)
T ss_pred cc--ccCCchhhHHHhccCCeE
Confidence 33 456777899999886 64
No 17
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=99.95 E-value=6.1e-28 Score=229.82 Aligned_cols=204 Identities=25% Similarity=0.411 Sum_probs=137.1
Q ss_pred EEEEEeCCccc--cchhhhHhhhcCCCCCceEEEEEeCCCCCcccchhhhhcccccchheecccccccccchhhhhHHHH
Q 012380 212 HVVLLTDNVLA--ASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKEM 289 (465)
Q Consensus 212 hIv~~sDn~la--~sVvI~Siv~Ns~~p~~i~FHIvtD~i~~~~m~~Wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~~ 289 (465)
||++++|..|. ++|+++|+++|++++..++|||++++++.+..+..-.. .. ++..+....
T Consensus 1 ~i~~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~---~~---~~~~~~~~~------------ 62 (250)
T PF01501_consen 1 HIVLACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRAL---AA---EVIEIEPIE------------ 62 (250)
T ss_dssp -EEEECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHH---SC---CCCTTECEE------------
T ss_pred CEEEEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhh---cc---cccceeeec------------
Confidence 89999997554 88999999999998778999999999985432211110 00 000000000
Q ss_pred HHHhhhHHHhhcccCcccccccchhhhh-hhccCCCCccchhhhHHhhhccccCCCCcEEEEecceeeecChHHHHhcCC
Q 012380 290 LEAHRLIWSHYYKNLKHEDFEYEGENRR-CLEVLSPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDL 368 (465)
Q Consensus 290 le~~~~i~~~y~~~~~~~~i~~p~~~~~-~l~~~~~~~iS~~~y~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~iDL 368 (465)
+ .+ ...... ........+++..+|+||++|++||+++||||||+|++|.+||++||++|+
T Consensus 63 -----------~-------~~-~~~~~~~~~~~~~~~~~~~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~ 123 (250)
T PF01501_consen 63 -----------F-------PD-ISMLEEFQFNSPSKRHFSPATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDL 123 (250)
T ss_dssp -----------E-------TS-GGHHH--TTS-HCCTCGGGGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---
T ss_pred -----------c-------ch-HHhhhhhhhcccccccccHHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccc
Confidence 0 00 000000 011234568899999999999999999999999999999999999999999
Q ss_pred CCCeEEEEeccCCCCCCCCccccccccccCccccccCCCCCCCccccceeeEehHHHHHhcHHHHHHHHHHhhccccccc
Q 012380 369 NGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLEHFHQLCL 448 (465)
Q Consensus 369 ~gkvigAVeDc~~~~~~~~~~r~~~yLnfs~p~i~~~f~~~~cyFNSGVlLiDL~~WRk~nite~~~~~l~~n~~~~l~~ 448 (465)
+|+.+||++|+... ...+...+..........+|||+|||++|+++||++++.++++.|++.+.. ...
T Consensus 124 ~~~~~~a~~~~~~~----------~~~~~~~~~~~~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 191 (250)
T PF01501_consen 124 QGKYLAAVEDESFD----------NFPNKRFPFSERKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGM--KLG 191 (250)
T ss_dssp TTSSEEEEE----H----------HHHTSTTSSEEECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTT--T-S
T ss_pred hhhhccccccchhh----------hhhhcccchhhcccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhccc--ccC
Confidence 99999999993221 111111111112334458999999999999999999999999999888766 346
Q ss_pred ccchhHHHHHhcCccC
Q 012380 449 LWMVTCILLILHGTWL 464 (465)
Q Consensus 449 ~~d~~~l~l~F~~rwl 464 (465)
.+||+++|++|+|+|.
T Consensus 192 ~~DQ~~ln~~~~~~~~ 207 (250)
T PF01501_consen 192 FPDQDILNIVFYGNIK 207 (250)
T ss_dssp SCHHHHHHHHHTTGEE
T ss_pred cCchHHHhhhccceeE
Confidence 7999999999999873
No 18
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.95 E-value=8.2e-28 Score=242.04 Aligned_cols=200 Identities=15% Similarity=0.202 Sum_probs=131.6
Q ss_pred cEEE-EEeCCccc-cchhhhHhhhcCCCCCceEEEEEeCCCCCcccchhhhhcccccchheecccccccccchhhhhHHH
Q 012380 211 HHVV-LLTDNVLA-ASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVNVGVKE 288 (465)
Q Consensus 211 ihIv-~~sDn~la-~sVvI~Siv~Ns~~p~~i~FHIvtD~i~~~~m~~Wf~~n~~~~a~v~v~ni~~F~wl~~~~~~vl~ 288 (465)
+|+| +++|+.+. +-|+|+|++.|+. ..++|||++|+...+ |+.. .++
T Consensus 1 ~~~~vv~~g~~~~~~~~~lkSil~~n~--~~l~Fhi~~d~~~~~----~~~~-------------------------~l~ 49 (304)
T cd06430 1 MHLAVVACGERLEETLTMLKSAIVFSQ--KPLRFHIFAEDQLKQ----SFKE-------------------------KLD 49 (304)
T ss_pred CEEEEEEcCCcHHHHHHHHHHHHHhCC--CCEEEEEEECCccCH----HHHH-------------------------HHH
Confidence 4664 55566655 7899999999985 479999999985432 2210 001
Q ss_pred HHHHhhhHHHhhcccCcccccccchhhhhhhccCCCCccchhhhHHhhhccccCCCCcEEEEecceeeecChHHHHhc--
Q 012380 289 MLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLEL-- 366 (465)
Q Consensus 289 ~le~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~iS~~~y~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~i-- 366 (465)
+......-.. .+. ...+..|....... ...+++.+|+||++|++||+++||||||+|+||.+||++||++
T Consensus 50 ~~~~~~~~~i-~~~---i~~I~~P~~~~~~w----s~l~~~~~y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~ 121 (304)
T cd06430 50 DWPELIDRKF-NYT---LHPITFPSGNAAEW----KKLFKPCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLK 121 (304)
T ss_pred HHHHhcccee-eeE---EEEEecCccchhhh----hhcccHHHHHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHh
Confidence 1000000000 000 11222332110001 1345669999999999999999999999999999999999999
Q ss_pred CCCCC-eEEEEeccCCCCCCCCccccccccccCccccccCCCCCCCccccceeeEehHHHHH-----------hcHHHHH
Q 012380 367 DLNGK-VVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRR-----------TNITATY 434 (465)
Q Consensus 367 DL~gk-vigAVeDc~~~~~~~~~~r~~~yLnfs~p~i~~~f~~~~cyFNSGVlLiDL~~WRk-----------~nite~~ 434 (465)
|++|+ ++|+|+|..... ...+.... ++| + ....|||||||+|||++||+ .++++++
T Consensus 122 df~~~~~aA~v~e~~~~~----~~~~~~~~--~~~-----~-~~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~ 189 (304)
T cd06430 122 KFNSTQLAAMAPEHEEPN----IGWYNRFA--RHP-----Y-YGKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEIL 189 (304)
T ss_pred hcCCCeEEEEEecccccc----hhhhhhhc--ccC-----c-ccccccccceeeeeHHHHHhhhcccccchhhhhHHHHH
Confidence 99996 555555542110 01111000 111 1 12347999999999999999 7889999
Q ss_pred HHHHHhhcccccccccchhHHHHHhcCcc
Q 012380 435 HKWLKLEHFHQLCLLWMVTCILLILHGTW 463 (465)
Q Consensus 435 ~~~l~~n~~~~l~~~~d~~~l~l~F~~rw 463 (465)
+++++++..+. .++||+++|++|+++|
T Consensus 190 ~~~~~~~~~~l--~~~DQDiLN~v~~~~p 216 (304)
T cd06430 190 MPLYKKYKLKI--TWGDQDLINIIFHHNP 216 (304)
T ss_pred HHHHHhcccCC--CCCCHHHHHHHHcCCC
Confidence 99999988654 4789999999999984
No 19
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=99.69 E-value=1.1e-16 Score=156.32 Aligned_cols=100 Identities=15% Similarity=0.085 Sum_probs=83.4
Q ss_pred ccchhhhHHhhhccccCCCCcEEEEecceeeecChHHHHhcCCCCCeEEEEeccCCCCCCCCccccccccccCccccccC
Q 012380 326 CLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSN 405 (465)
Q Consensus 326 ~iS~~~y~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~iDL~gkvigAVeDc~~~~~~~~~~r~~~yLnfs~p~i~~~ 405 (465)
+++..+|.||+++++. +++||||||+|+||.+||++||++ ++.++||.|+..
T Consensus 73 ~~~~~~~~kl~~~~l~-~~drvlylD~D~~v~~~i~~Lf~~---~~~~~a~~d~~~------------------------ 124 (240)
T cd02537 73 PRFKDTYTKLRLWNLT-EYDKVVFLDADTLVLRNIDELFDL---PGEFAAAPDCGW------------------------ 124 (240)
T ss_pred hHHHHHhHHHHhcccc-ccceEEEEeCCeeEccCHHHHhCC---CCceeeecccCc------------------------
Confidence 4567889999999975 699999999999999999999988 677888877531
Q ss_pred CCCCCCccccceeeEehHHHHHhcHHHHHHHHHHhhcccccccccchhHHHHHhcCc--cC
Q 012380 406 FDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLEHFHQLCLLWMVTCILLILHGT--WL 464 (465)
Q Consensus 406 f~~~~cyFNSGVlLiDL~~WRk~nite~~~~~l~~n~~~~l~~~~d~~~l~l~F~~r--wl 464 (465)
..|||||||++|+.+ ++.+.++++++++.+ +..+||+++|.+|+++ |.
T Consensus 125 ----~~~fNsGv~l~~~~~----~~~~~~~~~~~~~~~---~~~~DQdiLN~~~~~~~~~~ 174 (240)
T cd02537 125 ----PDLFNSGVFVLKPSE----ETFNDLLDALQDTPS---FDGGDQGLLNSYFSDRGIWK 174 (240)
T ss_pred ----cccccceEEEEcCCH----HHHHHHHHHHhccCC---CCCCCHHHHHHHHcCCCCEe
Confidence 248999999999954 566777888877654 4678999999999999 85
No 20
>PLN00176 galactinol synthase
Probab=99.66 E-value=5.5e-16 Score=158.53 Aligned_cols=121 Identities=18% Similarity=0.263 Sum_probs=86.2
Q ss_pred hhhHHhhhccccCCCCcEEEEecceeeecChHHHHhcCCCCCeEEEEeccCCCCCCCCccccc--------cccccCccc
Q 012380 330 MNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYK--------DYLNFSYPI 401 (465)
Q Consensus 330 ~~y~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~iDL~gkvigAVeDc~~~~~~~~~~r~~--------~yLnfs~p~ 401 (465)
.+|.||.++++. +++||||||+|+||.++|.+||+++ +..+|||.||.+...+....++. ..+++ |.
T Consensus 100 i~~tKl~iw~l~-~ydkvlyLDaD~lv~~nid~Lf~~~--~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~w--p~ 174 (333)
T PLN00176 100 INYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTW--PA 174 (333)
T ss_pred hhhhhhhhcccc-ccceEEEecCCEEeecChHHHhcCC--CcceEEEecccccccccccccccccccccchhhccc--hh
Confidence 467799999977 6999999999999999999999884 34689999997642211111110 00111 11
Q ss_pred cccCCCCCCCccccceeeEehHHHHHhcHHHHHHHHHHhhcccccccccchhHHHHHhcCccC
Q 012380 402 ISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLEHFHQLCLLWMVTCILLILHGTWL 464 (465)
Q Consensus 402 i~~~f~~~~cyFNSGVlLiDL~~WRk~nite~~~~~l~~n~~~~l~~~~d~~~l~l~F~~rwl 464 (465)
. .+ .+...||||||||||++.|+.+++. ++++.+... ..+||+++|.+|.|+|.
T Consensus 175 ~-~g-~~~~~yFNSGVlvinps~~~~~~ll----~~l~~~~~~---~f~DQD~LN~~F~~~~~ 228 (333)
T PLN00176 175 E-LG-PPPPLYFNAGMFVFEPSLSTYEDLL----ETLKITPPT---PFAEQDFLNMFFRDIYK 228 (333)
T ss_pred h-cc-CCCCCeEEeEEEEEEcCHHHHHHHH----HHHHhcCCC---CCCCHHHHHHHHcCcEE
Confidence 0 11 1236799999999999999987665 456555432 46999999999999994
No 21
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=99.40 E-value=4e-13 Score=134.69 Aligned_cols=99 Identities=9% Similarity=0.064 Sum_probs=81.2
Q ss_pred CccchhhhHHhhhccccCCCCcEEEEecceeeecChHHHHhcCCCCCeEEEEeccCCCCCCCCccccccccccCcccccc
Q 012380 325 SCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISS 404 (465)
Q Consensus 325 ~~iS~~~y~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~iDL~gkvigAVeDc~~~~~~~~~~r~~~yLnfs~p~i~~ 404 (465)
..++. +|.||.++++ ++++||||||+|+||.++|.+||+++.. ..+||+. ..
T Consensus 75 ~~~~~-~~tKl~~~~l-~~y~kvlyLDaD~l~~~~ideLf~~~~~-~~~Aap~-~~------------------------ 126 (278)
T cd06914 75 AYWAK-SLTKLRAFNQ-TEYDRIIYFDSDSIIRHPMDELFFLPNY-IKFAAPR-AY------------------------ 126 (278)
T ss_pred ccHHH-HHHHHHhccc-cceeeEEEecCChhhhcChHHHhcCCcc-cceeeec-Cc------------------------
Confidence 35554 4999999998 5899999999999999999999999833 3345432 10
Q ss_pred CCCCCCCccccceeeEehHHHHHhcHHHHHHHHHHhhcccccccccchhHHHHHhcCc
Q 012380 405 NFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLEHFHQLCLLWMVTCILLILHGT 462 (465)
Q Consensus 405 ~f~~~~cyFNSGVlLiDL~~WRk~nite~~~~~l~~n~~~~l~~~~d~~~l~l~F~~r 462 (465)
-||||||||||+++|+.+++++++.+....+. ...||.++|.+|.|+
T Consensus 127 ------~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~~-----~~~DQdiLN~~~~~~ 173 (278)
T cd06914 127 ------WKFASHLMVIKPSKEAFKELMTEILPAYLNKK-----NEYDMDLINEEFYNS 173 (278)
T ss_pred ------ceecceeEEEeCCHHHHHHHHHHHHHhcccCC-----CCCChHHHHHHHhCC
Confidence 18899999999999999999999998866533 457899999999998
No 22
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=99.06 E-value=2.1e-10 Score=130.45 Aligned_cols=198 Identities=15% Similarity=0.273 Sum_probs=134.9
Q ss_pred CCCccEEE-EEeCCccc--cchhhhHhhhcCCCCCceEEEEEeCCCCCcccchhhhhcccccchheecccccccccchhh
Q 012380 207 DPSFHHVV-LLTDNVLA--ASVVVSSTVQNSARPEKLVFHIVTDKKTYTPMHSWFAINSFRSAVVEVKGLHQYDWSQEVN 283 (465)
Q Consensus 207 d~~~ihIv-~~sDn~la--~sVvI~Siv~Ns~~p~~i~FHIvtD~i~~~~m~~Wf~~n~~~~a~v~v~ni~~F~wl~~~~ 283 (465)
|.++|||. +++..-|. +-++|.|+++|++.| +.|.++-+.++ | +|. +.
T Consensus 1178 ~~~vINIFSvASGHLYERflrIMm~SvlknTktp--VKFWfLkNyLS--------------P---------tFK----e~ 1228 (1470)
T KOG1879|consen 1178 DKEVINIFSVASGHLYERFLRIMMLSVLKNTKTP--VKFWFLKNYLS--------------P---------TFK----ES 1228 (1470)
T ss_pred ccceEEEEeeccccHHHHHHHHHHHHHHhCCCCc--eeEEeehhhcC--------------h---------HHH----HH
Confidence 45589995 55556565 889999999999976 66766665544 2 121 11
Q ss_pred hhHHHHHHHhhhHHHhhcccCcccccccchhhhhhhccCCCCccchhhhHHhhhccccC-CCCcEEEEecceeeecChHH
Q 012380 284 VGVKEMLEAHRLIWSHYYKNLKHEDFEYEGENRRCLEVLSPSCLSLMNHLRIYIPELFP-DLNKILFLDDDVVVQHDLSS 362 (465)
Q Consensus 284 ~~vl~~le~~~~i~~~y~~~~~~~~i~~p~~~~~~l~~~~~~~iS~~~y~Rf~LPeifP-~ldKVLYLD~DVVVq~DLse 362 (465)
+| .+...|.-.-..+...+|++++..-+..+ -+..|--+||--+|| +++||||.|+|-||+.||.|
T Consensus 1229 iP---------~mA~eYnFeyElv~YkWPrWLhqQ~EKQR----iiWgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~E 1295 (1470)
T KOG1879|consen 1229 IP---------HMAKEYNFEYELVQYKWPRWLHQQTEKQR----IIWGYKILFLDVLFPLNVDKVIFVDADQIVRADLKE 1295 (1470)
T ss_pred HH---------HHHHHhCceEEEEEecCchhhhhhhhhhh----hhhhhhhhhhhhccccccceEEEEcchHhhhhhhHH
Confidence 22 22334432223344578888765433211 256777788999999 99999999999999999999
Q ss_pred HHhcCCCCCeEEEEeccCCCCCCCCccccccccccCccccccCCCCCCCccccceeeEehHHHHHhcHHHHHH-HHHHh-
Q 012380 363 LLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMNVLDLEAWRRTNITATYH-KWLKL- 440 (465)
Q Consensus 363 Lw~iDL~gkvigAVeDc~~~~~~~~~~r~~~yLnfs~p~i~~~f~~~~cyFNSGVlLiDL~~WRk~nite~~~-~~l~~- 440 (465)
|.+.||+|.+.|-++-|..+ +.++.|--|+...+++... ...|..|...|+||++.|+..-.+++. +|+..
T Consensus 1296 L~dfdl~GaPygYtPfCdsR------~EMDGyRFWK~GYW~~hL~-grkYHISALYVVDLkrFReiaAGDrLR~qYQ~LS 1368 (1470)
T KOG1879|consen 1296 LMDFDLGGAPYGYTPFCDSR------REMDGYRFWKQGYWKKHLR-GRKYHISALYVVDLKRFREIAAGDRLRGQYQALS 1368 (1470)
T ss_pred HHhcccCCCccccCcccccc------ccccchhHHhhhHHHHHhc-cCccccceeeeeeHHHHHhcccchHHHHHHHhhc
Confidence 99999999999999999765 2233343344444443332 467999999999999999988877776 33332
Q ss_pred -hcccccccccchh
Q 012380 441 -EHFHQLCLLWMVT 453 (465)
Q Consensus 441 -n~~~~l~~~~d~~ 453 (465)
-+.+.-=.+||.|
T Consensus 1369 ~DPNSLsNLDQDLP 1382 (1470)
T KOG1879|consen 1369 QDPNSLSNLDQDLP 1382 (1470)
T ss_pred CCcchhhhcccccc
Confidence 2333222367765
No 23
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=95.40 E-value=0.011 Score=60.38 Aligned_cols=94 Identities=15% Similarity=0.141 Sum_probs=54.4
Q ss_pred hhhHHhhhccccCCCCcEEEEecceeeecChHHHHhcCCCCCeEEEEeccCCCC---------------------CCCCc
Q 012380 330 MNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGD---------------------NCCPG 388 (465)
Q Consensus 330 ~~y~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~iDL~gkvigAVeDc~~~~---------------------~~~~~ 388 (465)
.++.++.+-+.. ++|||+|||+|.||.+++.+||+.. -+-.+|-.|..... +....
T Consensus 155 ~mftKLrVfeqt-EyDRvifLDsDaivlknmDklFd~P--vyef~a~pD~~~sp~~fhrp~~~i~~~ft~~faayg~~r~ 231 (368)
T COG5597 155 DMFTKLRVFEQT-EYDRVIFLDSDAIVLKNMDKLFDYP--VYEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAYGKMRA 231 (368)
T ss_pred HHhHHHHhhhhh-hhceEEEeccchHHhhhhHHHhcch--hhhhccCCchhhCHHHhcCCCCccceeecHHHHhhcccHh
Confidence 344455554555 6999999999999999999999865 23334444432110 00000
Q ss_pred cccccccccC--cccc-ccCCCCCCCccccceeeEehHHHH
Q 012380 389 RKYKDYLNFS--YPII-SSNFDHDHCAWLYGMNVLDLEAWR 426 (465)
Q Consensus 389 ~r~~~yLnfs--~p~i-~~~f~~~~cyFNSGVlLiDL~~WR 426 (465)
.-|..|+++. .+.+ .+...+-.-+||||.|+++..+.-
T Consensus 232 ~ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~h 272 (368)
T COG5597 232 ALYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMH 272 (368)
T ss_pred hhccccccccccCCcccccCCCcHhhhhccCceeecchHHH
Confidence 1122344431 1222 122233367999999999987643
No 24
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=87.41 E-value=2.5 Score=40.13 Aligned_cols=95 Identities=18% Similarity=0.124 Sum_probs=55.9
Q ss_pred cccCCCCcEEEEecceeeecChHHHHhcCCCCCeEEEEeccCCCCCCCCccccccccccCccccccCCCCCCCcccccee
Q 012380 339 ELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSSCGDNCCPGRKYKDYLNFSYPIISSNFDHDHCAWLYGMN 418 (465)
Q Consensus 339 eifP~ldKVLYLD~DVVVq~DLseLw~iDL~gkvigAVeDc~~~~~~~~~~r~~~yLnfs~p~i~~~f~~~~cyFNSGVl 418 (465)
+++..=--|+|+|+|+|..+|..+++ +-.+.-+.+..|+.... . .......+|+|++
T Consensus 61 ~~L~~G~~vl~~D~Dvv~~~dp~~~~--~~~~~Di~~~~d~~~~~------------~---------~~~~~~~~n~G~~ 117 (212)
T PF03407_consen 61 DLLELGYDVLFSDADVVWLRDPLPYF--ENPDADILFSSDGWDGT------------N---------SDRNGNLVNTGFY 117 (212)
T ss_pred HHHHcCCceEEecCCEEEecCcHHhh--ccCCCceEEecCCCccc------------c---------hhhcCCccccceE
Confidence 44442235999999999999999999 21333344444554320 0 0011223599999
Q ss_pred eEehHHHHHhcHHHHHHHHHHhhcccccccccchhHHHHHhcCc
Q 012380 419 VLDLEAWRRTNITATYHKWLKLEHFHQLCLLWMVTCILLILHGT 462 (465)
Q Consensus 419 LiDL~~WRk~nite~~~~~l~~n~~~~l~~~~d~~~l~l~F~~r 462 (465)
.+--.. +..+-+..|.+...+.. ...||..+|.++...
T Consensus 118 ~~r~t~----~~~~~~~~w~~~~~~~~--~~~DQ~~~n~~l~~~ 155 (212)
T PF03407_consen 118 YFRPTP----RTIAFLEDWLERMAESP--GCWDQQAFNELLREQ 155 (212)
T ss_pred EEecCH----HHHHHHHHHHHHHHhCC--CcchHHHHHHHHHhc
Confidence 986544 22234445665544432 235899999887764
No 25
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=70.11 E-value=2.1 Score=45.30 Aligned_cols=32 Identities=31% Similarity=0.509 Sum_probs=23.1
Q ss_pred hhhHHhhhccccCCCCcEEEEecceeeecChHHHHh
Q 012380 330 MNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLE 365 (465)
Q Consensus 330 ~~y~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~ 365 (465)
.+..|+.+ ++. +. =||||+||||.++++.|=+
T Consensus 228 Sdl~RLA~--LyK-YG-GvYLDTDvIvLksl~~l~N 259 (409)
T KOG1928|consen 228 SDLSRLAL--LYK-YG-GVYLDTDVIVLKSLSNLRN 259 (409)
T ss_pred HHHHHHHH--HHH-hC-CEEeeccEEEecccccccc
Confidence 45556655 332 22 3899999999999999975
No 26
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=68.42 E-value=3.3 Score=41.63 Aligned_cols=36 Identities=28% Similarity=0.444 Sum_probs=29.6
Q ss_pred hHHhhhccccCCCCcEEEEecceeeecChHHHHhcC
Q 012380 332 HLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELD 367 (465)
Q Consensus 332 y~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~iD 367 (465)
|..=.+.-++...+.||+||+|.|...|++.||+.+
T Consensus 79 ~~~K~lA~l~ssFeevllLDaD~vpl~~p~~lF~~~ 114 (271)
T PF11051_consen 79 FQNKWLALLFSSFEEVLLLDADNVPLVDPEKLFESE 114 (271)
T ss_pred chhhhhhhhhCCcceEEEEcCCcccccCHHHHhcCc
Confidence 334445567878999999999999999999999854
No 27
>PLN02769 Probable galacturonosyltransferase
Probab=53.98 E-value=31 Score=38.99 Aligned_cols=75 Identities=9% Similarity=0.072 Sum_probs=60.9
Q ss_pred CCchhHHHHHHHHHHHHhhc--CCCCCCCccccccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 012380 86 SDTSLKLREELTRALIEAKD--GSGNGGGRIQGTLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQSSRQRESIY 163 (465)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~ee~~~~~~~~~~~~ 163 (465)
..++..+.+|++..++|... +|...+++ +|.++.+.+++|.+..++++.+.---.++...+-.-+...-.|..+.
T Consensus 203 ~~~~~~l~~el~~~i~e~~~~l~~~~~d~d---lp~~~~~~~~~m~~~~~~ak~~~~dc~~~~~klr~~l~~~E~~~~~~ 279 (629)
T PLN02769 203 LPGQEKLTRELKQNIQEHERVLSESITDAD---LPPFIQKKLEKMEQTIARAKSCPVDCNNVDRKLRQILDMTEDEAHFH 279 (629)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHhhcccccc---CChhHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 44566789999999999875 67777777 99999999999999999999998877777777777777666666654
No 28
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=44.16 E-value=12 Score=31.67 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=26.3
Q ss_pred CccchhhhHHhhhccccCCCCcEEEEecceeeecCh-HHH
Q 012380 325 SCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDL-SSL 363 (465)
Q Consensus 325 ~~iS~~~y~Rf~LPeifP~ldKVLYLD~DVVVq~DL-seL 363 (465)
.+.....++|+.+--..- =||+|.|+++.+++ .++
T Consensus 61 ~~~~~sD~~R~~~L~~~G----GiY~D~D~~~~rpl~~~~ 96 (103)
T PF04488_consen 61 NYAHKSDLLRYLVLYKYG----GIYLDLDVICLRPLDDPW 96 (103)
T ss_pred chHHHHHHHHHHHHHHcC----cEEEeCccccCcchhhhh
Confidence 345568889998854443 38999999999999 554
No 29
>PF05704 Caps_synth: Capsular polysaccharide synthesis protein; InterPro: IPR008441 This entry consists of several capsular polysaccharide proteins. Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae. This family is often transcribed with putative glycosyl transferases to give rise to bifunctional proteins [].
Probab=36.63 E-value=1.3e+02 Score=30.49 Aligned_cols=33 Identities=15% Similarity=0.227 Sum_probs=25.0
Q ss_pred hhhhHHhhhccccCCCCcEEEEecceeeecChHHHHh
Q 012380 329 LMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLE 365 (465)
Q Consensus 329 ~~~y~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~ 365 (465)
.+.++|+.|=.-.- =+++|++|.+.++|.+.+.
T Consensus 111 ~SDilR~~LL~~yG----GvWiDatv~~t~~l~~~~~ 143 (276)
T PF05704_consen 111 FSDILRLALLYKYG----GVWIDATVYLTKPLDDEIF 143 (276)
T ss_pred HHHHHHHHHHHHcC----cEEeCCceEECCchhHHHh
Confidence 35678988743332 3899999999999998765
No 30
>PLN02718 Probable galacturonosyltransferase
Probab=35.09 E-value=99 Score=34.98 Aligned_cols=70 Identities=13% Similarity=0.050 Sum_probs=38.0
Q ss_pred hhHHHHHHHHHHHHhhc--CCCCCCCccccccccHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 012380 89 SLKLREELTRALIEAKD--GSGNGGGRIQGTLDSFNELVKEVTSKRQDIKAFAFKTKAMLLKMEHEVQSSRQRES 161 (465)
Q Consensus 89 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~ee~~~~~~~~~~ 161 (465)
+..+.+|++..++|... ++.+.+++ +|.++++.+++|....+-++.+---.+++...+-.-+...-.|..
T Consensus 189 ~~~~~~el~~~i~e~~~~l~~~~~d~~---lp~~~~~~~~~m~~~~~~a~~~~~d~~~~~~klr~~~~~~e~~~~ 260 (603)
T PLN02718 189 NSQLVKELRLRTKELERAVGDATKDKD---LSKSALQRMKSMEVTLYKASRVFPNCPAIATKLRAMTYNTEEQVR 260 (603)
T ss_pred cHHHHHHHHHHHHHHHHHHhcccCCCC---CCHhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence 34566666666666553 45555555 666666666666665555555544445544444444443333333
No 31
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=34.87 E-value=74 Score=34.61 Aligned_cols=42 Identities=14% Similarity=0.411 Sum_probs=33.1
Q ss_pred CccchhhhHHhhhccccC--CCCcEEEEecceeeecChHHHHhc
Q 012380 325 SCLSLMNHLRIYIPELFP--DLNKILFLDDDVVVQHDLSSLLEL 366 (465)
Q Consensus 325 ~~iS~~~y~Rf~LPeifP--~ldKVLYLD~DVVVq~DLseLw~i 366 (465)
.|..++.|++.-|-.+|. .+++||.|.+|+.|--|.=+-++-
T Consensus 171 ~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~ 214 (434)
T PF03071_consen 171 GYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSA 214 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHH
Confidence 356788999999999996 478999999999999998665544
No 32
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=34.81 E-value=79 Score=35.56 Aligned_cols=16 Identities=19% Similarity=0.179 Sum_probs=10.7
Q ss_pred chhHHHHHHHHHHHHh
Q 012380 88 TSLKLREELTRALIEA 103 (465)
Q Consensus 88 ~~~~~~~~~~~~~~~~ 103 (465)
+..|..+|+.|++.-.
T Consensus 76 s~~r~~~e~~RI~~sV 91 (907)
T KOG2264|consen 76 SIGRILREQKRILASV 91 (907)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 3456788888877654
No 33
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=32.91 E-value=2.5e+02 Score=25.23 Aligned_cols=25 Identities=8% Similarity=0.218 Sum_probs=15.9
Q ss_pred cccccCCCchhHHHHHHHHHHHHhh
Q 012380 80 RRIFSGSDTSLKLREELTRALIEAK 104 (465)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (465)
.+.+..++++....+++.+.+.+++
T Consensus 73 ~~~~~~~~~~~~~l~~~~~~~~~~e 97 (121)
T TIGR02978 73 SKPWQAGQSPRQALREVKREFRDLE 97 (121)
T ss_pred hhhhhcCCCHHHHHHHHHHHHHHHH
Confidence 3456666666667777776666654
No 34
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=30.79 E-value=31 Score=34.10 Aligned_cols=97 Identities=16% Similarity=0.176 Sum_probs=17.8
Q ss_pred cchhhhHHhhhccccCCCCcEEEEecceeeecChHHHHhcCCCCCeEEE--EeccCCCCCCCCccccccccccCccc-cc
Q 012380 327 LSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGA--VVGSSCGDNCCPGRKYKDYLNFSYPI-IS 403 (465)
Q Consensus 327 iS~~~y~Rf~LPeifP~ldKVLYLD~DVVVq~DLseLw~iDL~gkvigA--VeDc~~~~~~~~~~r~~~yLnfs~p~-i~ 403 (465)
|+..-.+|=.+ .-+|+.+=|+|||+|.+|..-=-+|-+.=|+...+-- ..|.... +...+.+.-+..++. +.
T Consensus 61 W~K~~~lr~~m-~~~P~~~wv~~lD~Dali~n~~~~L~~~il~p~~L~~~~~r~~~~~----p~~~~~~~~~~~~~~~~~ 135 (239)
T PF05637_consen 61 WAKIPALRAAM-KKYPEAEWVWWLDSDALIMNPDFSLEEHILSPSRLDSLLLRDVPIV----PPDSIIKTYSVIDGNDIH 135 (239)
T ss_dssp HTHHHHHHHHH-HH-TT-SEEEEE-TTEEE--------------------------------------------------
T ss_pred hHHHHHHHHHH-HhCCCCCEEEEEcCCeEEEecccccccccccccccccccccccccc----cccccccccccccccccc
Confidence 44444444333 2358899999999999997654444332221111100 0110000 000111111111110 01
Q ss_pred cCCCCCCCccccceeeEehHHHHHh
Q 012380 404 SNFDHDHCAWLYGMNVLDLEAWRRT 428 (465)
Q Consensus 404 ~~f~~~~cyFNSGVlLiDL~~WRk~ 428 (465)
.-...+..+.|+|++++=-..|-+.
T Consensus 136 li~t~d~~gLNtGsFliRns~ws~~ 160 (239)
T PF05637_consen 136 LIITQDWNGLNTGSFLIRNSPWSRD 160 (239)
T ss_dssp -------------------------
T ss_pred ccccccccccccccccccccccccc
Confidence 1123456789999999988888764
No 35
>PF03195 DUF260: Protein of unknown function DUF260; InterPro: IPR004883 The lateral organ boundaries (LOB) gene is expressed at the adaxial base of initiating lateral organs and encodes a plant-specific protein of unknown function. The N-terminal one half of the LOB protein contains a conserved approximately 100-amino acid domain (the LOB domain) that is present in 42 other Arabidopsis thaliana proteins and in proteins from a variety of other plant species. Genes encoding LOB domain (LBD) proteins are expressed in a variety of temporal- and tissue-specific patterns, suggesting that they may function in diverse processes [] The LOB domain contains conserved blocks of amino acids that identify the LBD gene family. In particular, a conserved C-x(2)-C-x(6)-C-x(3)-C motif, which is defining feature of the LOB domain, is present in all LBD proteins. It is possible that this motif forms a new zinc finger [].
Probab=30.59 E-value=1e+02 Score=26.78 Aligned_cols=43 Identities=16% Similarity=0.167 Sum_probs=35.5
Q ss_pred ccccHHHHHHHH----hcccCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 012380 117 TLDSFNELVKEV----TSKRQDIKAFAFKTKAMLLKMEHEVQSSRQR 159 (465)
Q Consensus 117 ~~~~~~~~~~~~----~~~~~d~~~~~~kl~~~~~~~ee~~~~~~~~ 159 (465)
-++.++-++.|| ++.-|.|.-++..|...+..++.|+...+.|
T Consensus 54 R~~a~~Sl~yEA~~R~~dPv~Gc~G~i~~L~~ql~~~~~el~~~~~~ 100 (101)
T PF03195_consen 54 REDAMRSLVYEANARARDPVYGCVGIISQLQQQLQQLQAELALVRAQ 100 (101)
T ss_pred hhhHHHHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 356777777774 5678999999999999999999999877654
No 36
>PLN02829 Probable galacturonosyltransferase
Probab=27.65 E-value=1.5e+02 Score=33.77 Aligned_cols=15 Identities=13% Similarity=0.266 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHhhc
Q 012380 91 KLREELTRALIEAKD 105 (465)
Q Consensus 91 ~~~~~~~~~~~~~~~ 105 (465)
+.++.+...|.++++
T Consensus 240 ~~~~~m~~~i~~ak~ 254 (639)
T PLN02829 240 EKLKAMEQTLAKGKQ 254 (639)
T ss_pred HHHHHHHHHHHHHHh
Confidence 344444444444443
No 37
>PF04491 Pox_T4_N: Poxvirus T4 protein, N terminus; InterPro: IPR007580 Poxvirus T4 protein is thought to be secreted or retained in the endoplasmic reticulum if the protein also contains an additional C-terminal region (IPR007579 from INTERPRO). M-T4 of myxoma virus (O55698 from SWISSPROT) is thought to protect infected lymphocytes from apoptosis and modulate the inflammatory response to virus infection [].
Probab=25.24 E-value=34 Score=25.67 Aligned_cols=25 Identities=32% Similarity=0.311 Sum_probs=19.8
Q ss_pred eEEEeecceeeEEEccC----CCCccccc
Q 012380 2 KFYISTTGIKRVTISNT----GTGKRSSA 26 (465)
Q Consensus 2 ~~~~~~~~~~~~~~~~~----~~~~~~~~ 26 (465)
.||.|.|+-++.+++-+ |||++.+.
T Consensus 14 ~f~~~~t~C~~~~~~GGLItegNGfki~~ 42 (46)
T PF04491_consen 14 DFKSSRTGCHRPQGPGGLITEGNGFKIFA 42 (46)
T ss_pred eEEeecCCcccccCCCcEEeeCCcEEEEE
Confidence 49999999999887753 79987553
No 38
>COG0836 {ManC} Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=23.40 E-value=42 Score=35.14 Aligned_cols=22 Identities=14% Similarity=0.348 Sum_probs=16.9
Q ss_pred CCCCCCccccceeeEehHHHHH
Q 012380 406 FDHDHCAWLYGMNVLDLEAWRR 427 (465)
Q Consensus 406 f~~~~cyFNSGVlLiDL~~WRk 427 (465)
+....+||||||.+|.-....+
T Consensus 187 v~sG~y~WNSGmF~Fra~~~l~ 208 (333)
T COG0836 187 VESGEYLWNSGMFLFRASVFLE 208 (333)
T ss_pred HHcCceEeeccceEEEHHHHHH
Confidence 3445699999999998766554
No 39
>PLN03181 glycosyltransferase; Provisional
Probab=22.69 E-value=2e+02 Score=31.33 Aligned_cols=36 Identities=19% Similarity=0.239 Sum_probs=27.0
Q ss_pred CCCccchhhhHHhhhccccCCCCcEEEEecceeeecC
Q 012380 323 SPSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHD 359 (465)
Q Consensus 323 ~~~~iS~~~y~Rf~LPeifP~ldKVLYLD~DVVVq~D 359 (465)
.+..|+..-..|=.+ .-+|+.+-+.|||.|.|+..-
T Consensus 179 ~p~~WaKipalRaAM-~a~PeAEWfWWLDsDALIMNp 214 (453)
T PLN03181 179 MNSYWAKLPVVRAAM-LAHPEAEWIWWVDSDAVFTDM 214 (453)
T ss_pred CchhhhHHHHHHHHH-HHCCCceEEEEecCCceeecC
Confidence 345677776677443 238999999999999999854
No 40
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=21.40 E-value=57 Score=32.23 Aligned_cols=23 Identities=30% Similarity=0.693 Sum_probs=19.0
Q ss_pred hccccCCCCcEEEEecceeeecC
Q 012380 337 IPELFPDLNKILFLDDDVVVQHD 359 (465)
Q Consensus 337 LPeifP~ldKVLYLD~DVVVq~D 359 (465)
+..++|+.+=||+||+||.|...
T Consensus 35 va~~L~~~~~vlflDaDigVvNp 57 (222)
T PF03314_consen 35 VAKILPEYDWVLFLDADIGVVNP 57 (222)
T ss_pred HHHHhccCCEEEEEcCCceeecC
Confidence 45677889999999999998643
No 41
>PRK15383 type III secretion system protein; Provisional
Probab=21.04 E-value=43 Score=33.86 Aligned_cols=22 Identities=27% Similarity=0.522 Sum_probs=19.6
Q ss_pred cEEEEecceeeecChHHHHhcC
Q 012380 346 KILFLDDDVVVQHDLSSLLELD 367 (465)
Q Consensus 346 KVLYLD~DVVVq~DLseLw~iD 367 (465)
-+||||+|+++.+-|.-|+.-|
T Consensus 221 GCIYLD~DMilT~KLG~ly~PD 242 (335)
T PRK15383 221 GCIYLDADMLLTDKLGTLYLPD 242 (335)
T ss_pred ceEEeecceeeecccccEEcCC
Confidence 4999999999999999998654
No 42
>PRK15384 type III secretion system protein; Provisional
Probab=20.93 E-value=42 Score=33.94 Aligned_cols=22 Identities=23% Similarity=0.528 Sum_probs=19.6
Q ss_pred cEEEEecceeeecChHHHHhcC
Q 012380 346 KILFLDDDVVVQHDLSSLLELD 367 (465)
Q Consensus 346 KVLYLD~DVVVq~DLseLw~iD 367 (465)
-+||||+|+++.+-|.-|+.-|
T Consensus 218 GCIYLDaDMilT~KLG~ly~PD 239 (336)
T PRK15384 218 GCIYLDADMIITEKLGGIYIPD 239 (336)
T ss_pred ceEEeeccceeecccccEEcCC
Confidence 4899999999999999998654
No 43
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=20.87 E-value=44 Score=33.81 Aligned_cols=23 Identities=26% Similarity=0.554 Sum_probs=19.9
Q ss_pred CcEEEEecceeeecChHHHHhcC
Q 012380 345 NKILFLDDDVVVQHDLSSLLELD 367 (465)
Q Consensus 345 dKVLYLD~DVVVq~DLseLw~iD 367 (465)
+-+||||+|+++.+-|.-|+.-|
T Consensus 212 ~GCIYLD~DMilT~KLG~ly~PD 234 (326)
T PRK15382 212 EGCIYLDADMIITDKLGVLYAPD 234 (326)
T ss_pred CceEEeecceeeecccccEEcCC
Confidence 34999999999999999998655
Done!