BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012384
(465 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L7W8|FUCO2_ARATH Alpha-L-fucosidase 2 OS=Arabidopsis thaliana GN=At4g34260 PE=2 SV=1
Length = 843
Score = 618 bits (1593), Expect = e-176, Method: Compositional matrix adjust.
Identities = 282/415 (67%), Positives = 340/415 (81%), Gaps = 5/415 (1%)
Query: 43 GTPHVNINLEMNYWQSLPCNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDI 102
G PH+NINL+MNYW SLP N+ ECQEPLFD+++ L+ING KTAQVNY ASGWV H +DI
Sbjct: 428 GAPHLNINLQMNYWHSLPGNIRECQEPLFDYMSALAINGRKTAQVNYGASGWVAHQVSDI 487
Query: 103 WAKSSADRGKVVWALWPMGGAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLI 162
WAK+S DRG+ VWALWPMGGAWLCTH WEHY YTMD++FL+K+ YPLLEGC SFLLDWLI
Sbjct: 488 WAKTSPDRGEAVWALWPMGGAWLCTHAWEHYTYTMDKEFLKKKGYPLLEGCTSFLLDWLI 547
Query: 163 EGHDGYLETNPSTSPEHEFIAPDGKLACVSYSSTMDMAIIREVFSAIISAAEVLEKNEDA 222
+G DG+L+TNPSTSPEH F AP GK A VSYSSTMD+AII+EVF+ I+SA+E+L K D
Sbjct: 548 KGKDGFLQTNPSTSPEHMFTAPIGKPASVSYSSTMDIAIIKEVFADIVSASEILGKTNDT 607
Query: 223 LVEKVLKSLPRLRPTKIAEDGSIMEWAQDFKDPEVHHRHLSHLFGLFPGHTITIEKNPDL 282
L+ KV+ + +L PT+I++DGSI EWA+DF+DPEVHHRH+SHLFGLFPGHTIT+EK+P+L
Sbjct: 608 LIGKVIAAQAKLPPTRISKDGSIREWAEDFEDPEVHHRHVSHLFGLFPGHTITVEKSPEL 667
Query: 283 CKAAEKTLQKRGEEGPGWSITWKTALWARLHDQEHAYRMVKRLFNLVDPEHEKHFEGGLY 342
KA E TL+KRGEEGPGWS TWK ALWARLH+ EHAYRMV +F+LVDP +E+++EGGLY
Sbjct: 668 AKAVEATLKKRGEEGPGWSTTWKAALWARLHNSEHAYRMVTHIFDLVDPLNERNYEGGLY 727
Query: 343 SNLFAAHPPFQIDANFGFTAAVAEMLVQSTLNDLYLLPALPWDKWSSGCVKGLKARGGET 402
SN+F AHPPFQIDANFGF AAVAEMLVQST DLYLLPALP DKW +G V GL+ARGG T
Sbjct: 728 SNMFTAHPPFQIDANFGFAAAVAEMLVQSTTKDLYLLPALPADKWPNGIVNGLRARGGVT 787
Query: 403 VSICWKDGDLHEVGIYSNYSNNDHDSFKTLHYRGTSVKVNLSAGKIYTFNRQLKC 457
VSI W +G+L E G++S + + YRG S L GK++TF++ L+C
Sbjct: 788 VSIKWMEGNLVEFGLWS-----EQIVSTRIVYRGISAAAELLPGKVFTFDKDLRC 837
>sp|Q5AU81|AFCA_EMENI Alpha-fucosidase A OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=afcA PE=2 SV=1
Length = 809
Score = 201 bits (512), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 206/402 (51%), Gaps = 52/402 (12%)
Query: 46 HVNINLEMNYWQSLPCNLSECQEPLFDFLTYLSI-NGSKTAQVNYLASGWVIHHKTDIWA 104
H NINL+MNYW + L E Q L++++ + G++TA++ Y ASGWV+H++ +I+
Sbjct: 407 HANINLQMNYWLADQTGLGETQHALWNYMADTWVPRGTETARLLYNASGWVVHNEINIFG 466
Query: 105 KSSADRGKVVWALWPMGGAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEG 164
+A + WA +P AW+ H+W++++YT D +L + Y LL+G ASF L L E
Sbjct: 467 -FTAMKEDAGWANYPAAAAWMMQHVWDNFDYTHDTAWLVSQGYALLKGIASFWLSSLQED 525
Query: 165 ---HDGYLETNPSTSPEHEFIAPDGKLACVSYSSTMDMAIIREVFSAIISAAEVLEKNED 221
+DG L NP SPE P C Y +I +VF +++A E + +++
Sbjct: 526 KFFNDGSLVVNPCNSPE---TGPT-TFGCTHYQQ-----LIHQVFETVLAAQEYIHESDT 576
Query: 222 ALVEKVLKSLPRLRPT-KIAEDGSIMEWAQDFKDPEVH-------HRHLSHLFGLFPGHT 273
V+ V +L RL ++ G + EW K P+ + HRHLSHL G +PG++
Sbjct: 577 KFVDSVASALERLDTGLHLSSWGGLKEW----KLPDSYGYDNMSTHRHLSHLAGWYPGYS 632
Query: 274 ITI----EKNPDLCKAAEKTLQKRG-----EEGPGWSITWKTALWARLHDQEHAYRMVKR 324
I+ +N + A ++TL RG + GW+ W+ A WARL+D AY ++
Sbjct: 633 ISSFAHGYRNKTIQDAVKETLTARGMGNAADANAGWAKVWRAACWARLNDSSMAYDELRY 692
Query: 325 LFNLVDPEHEKHFEGGLYSNLFAAHPPFQIDANFGFTAAVAEMLV--------QSTLNDL 376
+++F G S + A PPFQIDANFGF AV MLV +
Sbjct: 693 AI-------DENFVGNGLSMYWGASPPFQIDANFGFAGAVLSMLVVDLPTPRSDPGQRTV 745
Query: 377 YLLPALPWDKWSSGCVKGLKARGGETVSICW-KDGDLHEVGI 417
L PA+P W G KGL+ RGG V W K G ++ V I
Sbjct: 746 VLGPAIP-SAWGGGRAKGLRLRGGAKVDFGWDKRGVVNWVNI 786
>sp|A2R797|AFCA_ASPNC Probable alpha-fucosidase A OS=Aspergillus niger (strain CBS 513.88
/ FGSC A1513) GN=afcA PE=3 SV=1
Length = 793
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/390 (31%), Positives = 185/390 (47%), Gaps = 38/390 (9%)
Query: 43 GTPHVNINLEMNYWQSLPCNLSECQEPLFDFLTYLSI-NGSKTAQVNYLAS-GWVIHHKT 100
G H NINL+MN+W L E EPL+ ++ + G++TA++ Y S GWV H +
Sbjct: 384 GDYHANINLQMNHWAVDQTGLGELTEPLWTYMAETWMPRGAETAELLYGTSEGWVTHDEM 443
Query: 101 DIWAKSSADRGKVVWALWPMGGAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDW 160
+ + + A + WA +P AW+ H+W+H++Y+ D + + YP+L+G A F L
Sbjct: 444 NTFGHT-AMKDVAQWADYPATNAWMSHHVWDHFDYSQDSAWYRETGYPILKGAAQFWLSQ 502
Query: 161 LIEGH---DGYLETNPSTSPEHEFIAPDGKLACVSYSSTMDMAIIREVFSAIISAAEVLE 217
L++ DG L NP SPEH C Y +I E+F ++
Sbjct: 503 LVKDEYFKDGTLVVNPCNSPEHGPTLTPQTFGCTHY-----QQLIWELFDHVLQGWTASG 557
Query: 218 KNEDALVEKVLKSLPRLRP-TKIAEDGSIMEWAQDFKDPEVHHRHLSHLFGLFPGHTITI 276
++ + + L P I G I EW D HRHLS+L+G +PG+ I+
Sbjct: 558 DDDTSFKNAITSKFSTLDPGIHIGSWGQIQEWKLDIDVKNDTHRHLSNLYGWYPGYIISS 617
Query: 277 --EKNPDLCKAAEKTLQKRG----EEGPGWSITWKTALWARLHDQEHAYRMVKRLFNLVD 330
N + A E TL RG + GW+ W++A WA L+ + AY + + D
Sbjct: 618 VHGSNKTITDAVETTLYSRGTGVEDSNTGWAKVWRSACWALLNVTDEAYSELS--LAIQD 675
Query: 331 PEHEKHFEGGLYSNLFAAHPPFQIDANFGFTAAVAEMLVQST-----------LNDLYLL 379
E F+ +++ PPFQIDANFG A+ +ML++ + D+ L
Sbjct: 676 NFAENGFD------MYSGSPPFQIDANFGLVGAMVQMLIRDSDRSSADASAGKTQDVLLG 729
Query: 380 PALPWDKWSSGCVKGLKARGGETVSICWKD 409
PA+P W G V GL+ RGG VS W D
Sbjct: 730 PAIP-AAWGGGSVGGLRLRGGGVVSFSWND 758
>sp|Q2USL3|AFCA_ASPOR Probable alpha-fucosidase A OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=afcA PE=3 SV=2
Length = 723
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 161/411 (39%), Gaps = 95/411 (23%)
Query: 36 TKILVQHGTPHVNINLEMNYWQSLPCNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWV 95
TK G H NINL+MN W + L E +F NY+ W+
Sbjct: 374 TKNAAWSGDYHANINLQMNLWGAEATGLGELTVAVF----------------NYMEQNWM 417
Query: 96 IHHKTDIWAKSSADRGKVVWALWPMGGAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCAS 155
RG L G W+ TH + N
Sbjct: 418 -------------PRGAETAELLYGGAGWV-TH--DEMN--------------------- 440
Query: 156 FLLDWLIEGHDGYLETNPSTSPEHEFIAPDGKLACVSYSSTMDMAIIREVFSAIISAAEV 215
I GH G L NP TSPE ++ T +I +V+ I AE+
Sbjct: 441 ------IFGHTGSLVVNPCTSPEQ---------GPTTFGCTHWQQLIHQVYENAIQGAEI 485
Query: 216 LEKNEDALVEKVLKSLPRL-RPTKIAEDGSIMEW----AQDFKDPEVHHRHLSHLFGLFP 270
+ + L++ + LPRL + I G I EW + D++ HRHLSHL G +P
Sbjct: 486 AGETDSTLLKDIKDQLPRLDKGLHIGTWGQIKEWKLPDSYDYEKEGNEHRHLSHLVGWYP 545
Query: 271 GHTITIE----KNPDLCKAAEKTLQKRGE---EGPGWSITWKTALWARLHDQEHAYRMVK 323
G +++ N + A +L RG GW W++A WARL++ E A+ ++
Sbjct: 546 GWSLSSYFNGYNNATIQSAVNTSLISRGVGLYTNAGWEKVWRSACWARLNNTEKAHYELR 605
Query: 324 RLFNLVDPEHEKHFEGGLYSNLFAAHPPFQIDANFGFTAAVAEMLV----------QSTL 373
L ++ LYS FQIDANFG+ AV MLV + +
Sbjct: 606 ----LTIDQNIGQSGLSLYSGGDTPSGAFQIDANFGYLGAVLSMLVVDMPLDSTHSEDDV 661
Query: 374 NDLYLLPALPWDKWSSGCVKGLKARGGETVSICWKDGDLHEVGIYSNYSNN 424
+ L PA+P W+ G VKGL+ RGG +V W L + + S+N
Sbjct: 662 RTVVLGPAIP-AAWAGGSVKGLRLRGGGSVDFSWDSEGLVDKASATGVSSN 711
>sp|Q2KHW5|ACBG1_BOVIN Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Bos taurus GN=ACSBG1
PE=2 SV=1
Length = 726
Score = 32.0 bits (71), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 203 REVFSAIISAAEVLEKNEDALVEKVLKSLPRLRPTKIAEDGSIMEWAQDFKDPEVHHRHL 262
+ V S + +EV+ K ++A+ + + + + R+ A I +WA KD + L
Sbjct: 620 QRVGSKATTVSEVVGKKDEAVYQAIEEGIQRVNMNAAARPYHIQKWAILEKDFSISGGEL 679
Query: 263 SHLFGLFPGHTITIEKNPDLCKA-AEKTLQKRGEEGPGWSITWKTA 307
L +EK D+ + ++ K+G PG+S+ W+T
Sbjct: 680 GPTMKL--KRLAVLEKYKDVIDSFYQEQKSKQGSSLPGFSLRWQTG 723
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 190,837,320
Number of Sequences: 539616
Number of extensions: 8267460
Number of successful extensions: 18293
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 18266
Number of HSP's gapped (non-prelim): 11
length of query: 465
length of database: 191,569,459
effective HSP length: 121
effective length of query: 344
effective length of database: 126,275,923
effective search space: 43438917512
effective search space used: 43438917512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)