Query 012384
Match_columns 465
No_of_seqs 147 out of 1014
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 08:24:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012384.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012384hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2eab_A Alpha-fucosidase; glyco 100.0 1.6E-99 5E-104 838.4 32.2 409 19-455 374-898 (899)
2 2rdy_A BH0842 protein; PSI-II, 100.0 2.1E-97 7E-102 821.2 39.5 448 4-457 289-795 (803)
3 1h54_A Maltose phosphorylase; 100.0 4.8E-61 1.7E-65 526.9 29.0 380 4-426 298-740 (754)
4 2okx_A Rhamnosidase B; alpha b 99.8 2.2E-18 7.4E-23 194.7 20.0 282 122-433 630-942 (956)
5 3cih_A Putative alpha-rhamnosi 99.1 4E-09 1.4E-13 116.0 24.1 307 122-461 386-737 (739)
6 3qde_A Cellobiose phosphorylas 98.8 7.1E-08 2.4E-12 106.7 15.9 274 121-406 416-771 (811)
7 3rrs_A Cellobiose phosphorylas 98.7 5.7E-08 2E-12 107.5 14.1 273 121-405 423-783 (822)
8 1v7w_A Chitobiose phosphorylas 98.5 8.1E-07 2.8E-11 98.6 13.4 102 121-235 427-539 (807)
9 2p0v_A Hypothetical protein BT 98.1 7.3E-06 2.5E-10 83.8 9.0 191 122-328 182-430 (489)
10 3c68_A Uncharacterized protein 97.5 0.0036 1.2E-07 68.7 18.3 44 124-168 395-438 (761)
11 1ulv_A Glucodextranase; GH fam 97.4 0.0016 5.6E-08 73.5 14.7 131 58-235 341-474 (1020)
12 2z07_A Putative uncharacterize 97.2 0.00034 1.1E-08 71.4 6.3 44 124-168 106-153 (420)
13 2fba_A Glucoamylase Glu1; (alp 96.5 0.0033 1.1E-07 65.4 6.9 93 121-235 146-254 (492)
14 3p2c_A Putative glycosyl hydro 96.4 0.0088 3E-07 60.7 8.7 203 122-328 165-412 (463)
15 3qt9_A Putative uncharacterize 96.0 0.015 5.1E-07 58.5 8.3 203 122-328 137-384 (427)
16 2vn4_A Glucoamylase; hydrolase 96.0 0.027 9.2E-07 59.9 10.7 141 60-235 68-221 (599)
17 1gai_A Glucoamylase-471; hydro 95.6 0.018 6E-07 59.5 7.0 87 123-235 133-220 (472)
18 3qry_B Putative uncharacterize 95.4 0.072 2.5E-06 53.5 10.5 202 122-328 136-384 (426)
19 2jg0_A Periplasmic trehalase; 94.6 0.33 1.1E-05 50.9 13.3 167 199-376 308-506 (535)
20 1lf6_A Glucoamylase; (alpha/al 91.2 1.6 5.5E-05 47.0 12.8 128 58-235 352-482 (684)
21 2ahf_A Unsaturated glucuronyl 86.2 1.7 5.8E-05 43.3 7.9 40 117-161 218-257 (377)
22 2zzr_A Unsaturated glucuronyl 83.2 1.2 4.2E-05 44.6 5.3 41 117-162 243-283 (397)
23 3p6b_A Cellulose 1,4-beta-cell 44.0 53 0.0018 29.4 7.0 43 409-459 74-116 (205)
24 2khf_A PLNJ; anti-microbial, b 42.4 4.7 0.00016 22.6 -0.2 7 7-13 3-10 (26)
25 3r07_C Putative lipoate-protei 31.7 50 0.0017 25.4 4.1 26 395-420 12-38 (91)
26 2xdp_A Lysine-specific demethy 30.5 49 0.0017 27.1 4.0 52 394-459 63-114 (123)
27 3k7x_A LIN0763 protein; Q92DQ0 29.7 45 0.0015 32.4 4.4 38 118-156 211-248 (349)
28 3k4z_A Glycoside hydrolase fam 28.1 1.3E+02 0.0044 28.3 7.2 43 409-459 53-95 (289)
29 2zbl_A Putative isomerase; N-a 26.5 96 0.0033 30.6 6.3 42 121-168 112-153 (421)
30 2qqr_A JMJC domain-containing 24.5 63 0.0022 26.3 3.6 51 395-459 63-113 (118)
31 1gu3_A Endoglucanase C; carboh 20.7 89 0.0031 26.2 4.0 44 408-460 28-71 (149)
No 1
>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A*
Probab=100.00 E-value=1.6e-99 Score=838.43 Aligned_cols=409 Identities=31% Similarity=0.531 Sum_probs=380.4
Q ss_pred HHHHhhhhhhcccCCC-CCCCCCC------------------CCCccccccccchhccccCCCCccccHHHHHHHHHHHH
Q 012384 19 FLLHDLELRLPTCRAY-GTKILVQ------------------HGTPHVNINLEMNYWQSLPCNLSECQEPLFDFLTYLSI 79 (465)
Q Consensus 19 ~~~~~~rYll~sssr~-g~~p~~l------------------~~dyh~n~N~qm~ywp~~~~n~~e~~~~l~~~~~~~l~ 79 (465)
++|+|||||||||||+ |.+|++| +|+||+|||+||+|||++++|+|||++||++|++++++
T Consensus 374 l~f~fgRYlLissSr~~g~lP~nLqGiWs~~~g~n~~~~p~W~g~y~~NiNtqmnywPa~~~nlpE~a~pLl~y~~~ll~ 453 (899)
T 2eab_A 374 LVYKYGRYLTIGSSRENSQLPSNLQGIWSVTAGDNAHGNTPWGSDFHMNVNLQMNYWPTYSANMGELAEPLIEYVEGLVK 453 (899)
T ss_dssp HHHHHHHHHHHHHCCTTCSSCCBTTBTCCCCCCSSTTSSSGGGGCEETTTHHHHHTSSTTTTTCGGGGHHHHHHHHHTHH
T ss_pred HHHHHHHHHHhhcCCCCCCCCCCcccccccccCccccCCCCcCcceeeecccccccchhhhcCCHHHHHHHHHHHHHHHH
Confidence 4799999999999997 6799997 35689999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCC-------------ceEEccccCCCCCCCCCCCCcccccCccCHHHHHHHHHHHHHhcCCHHHHHHhh
Q 012384 80 NGSKTAQVNYLAS-------------GWVIHHKTDIWAKSSADRGKVVWALWPMGGAWLCTHLWEHYNYTMDRDFLEKRA 146 (465)
Q Consensus 80 ~~r~~A~~~yG~~-------------G~~~p~~~~~~g~~~~~~~~~~~~~~~~~~aw~a~~~w~yy~~TgD~~fL~~~~ 146 (465)
.||++||++||++ ||+.++++++|+.++| +.++.|+.|+++++|+|+++|+||+||+|++|| +++
T Consensus 454 ~gr~~Ar~~yG~~ga~~~~~~~g~~~Gw~~~~~~~~w~~t~p-~~~~~w~~~~~~~aWla~~lweyy~yTgD~~fL-~~~ 531 (899)
T 2eab_A 454 PGRVTAKVYAGAETTNPETTPIGEGEGYMAHTENTAYGWTAP-GQSFSWGWSPAAVPWILQNVYEAYEYSGDPALL-DRV 531 (899)
T ss_dssp HHHHHHHHHHCCCCSSTTTSCTTSSSCCCCCSEECTTCCCSC-CSSHHHHCCTTHHHHHHHHHHHHHHTTCCHHHH-HHH
T ss_pred HHHHHHHHHcCCcccccccccccCcCCeEEeeccCCcccCCC-CCCCcccccCchHHHHHHHHHHHHHhhCCHHHH-HHH
Confidence 9999999999999 8888889999999888 456788888999999999999999999999999 899
Q ss_pred HHHHHHHHHHHHH-hcccCC---CCeEEECCCCCCCCCcCCCCCCcccc-ccCchHHHHHHHHHHHHHHHHHHHhCC---
Q 012384 147 YPLLEGCASFLLD-WLIEGH---DGYLETNPSTSPEHEFIAPDGKLACV-SYSSTMDMAIIREVFSAIISAAEVLEK--- 218 (465)
Q Consensus 147 ~p~l~~~A~F~~~-~l~~~~---~G~y~i~ps~sPE~~~~~~~G~~~~~-~~n~t~d~~~v~~~l~~~~~~a~~Lg~--- 218 (465)
||+|+++|+||++ ++++++ +|+|++.||+|||+.+ . ++|++||+++|+++|+.+++++++||+
T Consensus 532 yPlLkeaA~F~~d~~l~~~~~~~~G~~vi~ps~SPE~~~---------~~~~~~tydn~l~~~ll~~~i~aa~~Lg~~~~ 602 (899)
T 2eab_A 532 YALLKEESHFYVNYMLHKAGSSSGDRLTTGVAYSPEQGP---------LGTDGNTYESSLVWQMLNDAIEAAKAKGDPDG 602 (899)
T ss_dssp HHHHHHHHHHHHHHTCEECCGGGCSSEECSEEEETTEEE---------EEEECCHHHHHHHHHHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHHHHHhhheEecCcCCCCeEEEccccCCCCCC---------CCCCCcHHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 9999999999999 778887 7999999999999974 4 899999999999999999999999998
Q ss_pred ----------------------CcHHHHHHHHHHcCCCCCCccCCCCceeecccCCCC-------------CCCCccchh
Q 012384 219 ----------------------NEDALVEKVLKSLPRLRPTKIAEDGSIMEWAQDFKD-------------PEVHHRHLS 263 (465)
Q Consensus 219 ----------------------~~~~~~~~w~~i~~~L~p~~~~~~G~l~ew~~~~~~-------------~~~~hrh~s 263 (465)
+ ++++++|++++++|+|++++++|+|+||.+++.. .+++|||+|
T Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~w~~~~~kL~p~~i~~~G~l~EW~~d~~~~~~~~G~~i~~~~~~~~HRH~S 681 (899)
T 2eab_A 603 LVGNTTDCSADNWAKNDSGNFTD-ANANRSWSCAKSLLKPIEVGDSGQIKEWYFEGALGKKKDGSTISGYQADNQHRHMS 681 (899)
T ss_dssp CCCCSTTCCGGGGCBCTTSCBSC-TTSCCCHHHHHHHHCCCCBCTTSCBCSSTTBCSTTBBTTSCBCTTCCTTSCCSCCG
T ss_pred cchhhhhhhhhccccccccccCC-HHHHHHHHHHHhCCCCcccCCCceeeecccccccccccccccccccCCCcCCcchh
Confidence 6 6678899999999999999999999999987652 557999999
Q ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHHhhhC------CCCCChHHHHHHHHHHhcCChHHHHHHHHHHHhccCCcccccC
Q 012384 264 HLFGLFPGHTITIEKNPDLCKAAEKTLQKRG------EEGPGWSITWKTALWARLHDQEHAYRMVKRLFNLVDPEHEKHF 337 (465)
Q Consensus 264 ~L~~l~P~~~i~~~~~p~l~~aa~~tl~~r~------~~~~gws~~~~a~~aArlgd~e~A~~~l~~~~~~~~~~~~~~~ 337 (465)
||+++||+++|+. ++|++.+||+++|+.|+ ++++|||.+|.++++|||||+|+|+++|+.+++
T Consensus 682 hL~~lyPg~~I~~-~~pel~~aa~~tL~~Rg~~g~~~~~~tGws~aw~~~~~ARL~dg~~A~~~l~~ll~---------- 750 (899)
T 2eab_A 682 HLLGLFPGDLITI-DNSEYMDAAKTSLRYRCFKGNVLQSNTGWAIGQRINSWARTGDGNTTYQLVELQLK---------- 750 (899)
T ss_dssp GGTTTTTSSSSCT-TCHHHHHHHHHHHHHHHEETTEECCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----------
T ss_pred hhHhhcCccccCC-CCHHHHHHHHHHHHHhCcccCCCCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHh----------
Confidence 9999999999995 89999999999999998 678999999999999999999999999999987
Q ss_pred CCCcccccccCCCCcccCccchhHHHHHHHHhhccC-----------CeEEeCCCCCccccCceeecceeeecceEEEEE
Q 012384 338 EGGLYSNLFAAHPPFQIDANFGFTAAVAEMLVQSTL-----------NDLYLLPALPWDKWSSGCVKGLKARGGETVSIC 406 (465)
Q Consensus 338 ~~g~~~nl~~~h~pfqidg~~g~~~av~emLlqs~~-----------g~i~l~PalP~~~W~~gs~~gL~arG~~~V~~~ 406 (465)
++++||||+.|+|||||||||+++||+||||||+. |.|+|||||| ++|++|+|+||||||||+|+++
T Consensus 751 -~~~~~Nl~~~h~pfqiDgnfG~~agi~EMLlQS~~~~~~~~g~~~~g~I~LlPAlP-~~W~~Gsv~GLrarGgf~V~~~ 828 (899)
T 2eab_A 751 -NAMYANLFDYHAPFQIDGNFGNTSGVDEMLLQSNSTFTDTAGKKYVNYTNILPALP-DAWAGGSVSGLVARGNFTVGTT 828 (899)
T ss_dssp -HSBCTTCCBBSSSBCTHHHHHHHHHHHHHHEECCCEEECTTCCEEETCEEESTTCC-TTCCSEEEEEEEETTTEEEEEE
T ss_pred -cCcCcccccCCCCeeeccchhHHHHHHHHHhccccccccccCCCcCCeEEEcCcCC-cccccCeEEEEEecCcEEEEEE
Confidence 58999999999999999999999999999999999 9999999999 9999999999999999999999
Q ss_pred EeCCeEEEEEEEeCCCCCcccceeeeecCC------------------------eEEEEEccCCcEEEEeecc
Q 012384 407 WKDGDLHEVGIYSNYSNNDHDSFKTLHYRG------------------------TSVKVNLSAGKIYTFNRQL 455 (465)
Q Consensus 407 ~~~g~~~~~~i~s~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~G~~~~i~~~~ 455 (465)
|++|++++++|+|.+|++|+ |++|+++ ..++|+|++|++|+|+..+
T Consensus 829 w~~G~l~~~~i~s~~g~~~~---v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~y~i~~~~ 898 (899)
T 2eab_A 829 WKNGKATEVRLTSNKGKQAA---VKITAGGAQNYEVKNGDTAVNAKVVTNADGASLLVFDTTAGTTYTITKKA 898 (899)
T ss_dssp EETTEEEEEEEEESSCCCEE---EEETTTCGGGEEEEETTEECCCEEEECTTSCEEEEECCCTTEEEEEEEC-
T ss_pred EECCEEEEEEEEeCCCCeEE---EEeCCCCcceeEEEecCCcEEEeecccccCCceEEEEccCCCEEEEEecC
Confidence 99999999999999999999 6766622 2378999999999998753
No 2
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}
Probab=100.00 E-value=2.1e-97 Score=821.22 Aligned_cols=448 Identities=42% Similarity=0.796 Sum_probs=405.7
Q ss_pred cccc-hhhccch-----h-------------------hHH--HHHHhhhhhhcccCCCCCCCCCC------------CCC
Q 012384 4 HPWW-SFYSSLV-----D-------------------ICL--FLLHDLELRLPTCRAYGTKILVQ------------HGT 44 (465)
Q Consensus 4 ~~ww-~~~~~~~-----d-------------------~~~--~~~~~~rYll~sssr~g~~p~~l------------~~d 44 (465)
++|| +||+++. | +.+ ++|+|+||+|+|+||+|++|++| +|+
T Consensus 289 ~~~w~~~w~r~~i~l~g~~~~~~~~td~rl~~~~~~d~~l~~l~~~~~rYlL~sssr~g~~P~~LqGlw~~~~~~~W~g~ 368 (803)
T 2rdy_A 289 LEDYTKLFNRVSLHLGESIAPADMSTDQRIKEYGSRDLGLVELLFQYGRYLMIASSRPGTQPANLQGIWNEETRAPWSSN 368 (803)
T ss_dssp HHHHHHHHTTCEEECCCCCSCTTCCHHHHHHHHGGGSHHHHHHHHHHHHHHHHHHCCTTSCCCBTTBTCCCCTTCGGGGC
T ss_pred HHHHHHhhCceEEEeCCCcccccCChHHHHHHhccCCHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccCCCCCCCCCCcc
Confidence 5799 9999862 2 233 56999999999999999999998 378
Q ss_pred ccccccccchhccccCCCCccccHHHHHHHHHHHHhHHHHHHHhcCCCceEEccccCCCCCCCCCC----CCcccccCcc
Q 012384 45 PHVNINLEMNYWQSLPCNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADR----GKVVWALWPM 120 (465)
Q Consensus 45 yh~n~N~qm~ywp~~~~n~~e~~~~l~~~~~~~l~~~r~~A~~~yG~~G~~~p~~~~~~g~~~~~~----~~~~~~~~~~ 120 (465)
||+|||+||+|||++.+|+||+++|||+||+++++.||++||++||++||++|+++|+|+.++|.+ +.+.|+.|++
T Consensus 369 y~~n~N~em~ywP~~~~n~pE~~~~ll~y~~~~l~~ar~~A~~~~G~~Ga~~p~~td~w~~~~p~g~~G~~~~~~~~w~~ 448 (803)
T 2rdy_A 369 YTLNINAEMNYWPAETCNLAELHKPLIHFIERLAANGKKTAEINYGARGWVAHHNADLWGQTAPVGDFGHGDPVWAFWPM 448 (803)
T ss_dssp EETTTHHHHHTTTTTTTTCGGGGHHHHHHHHHHHHHHHHHHHHHHCCSSCCCCSEECTTCCCSCCSGGGTSCHHHHCCCC
T ss_pred ceeehhhhhhHhhhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEeeccccccccCCccccCCCCcccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999987742 2456889999
Q ss_pred CHHHHHHHHHHHHHhcCCHHHHHHhhHHHHHHHHHHHHHhcccCCCCeEEECCCCCCCCCcCCCCCCccccccCchHHHH
Q 012384 121 GGAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYLETNPSTSPEHEFIAPDGKLACVSYSSTMDMA 200 (465)
Q Consensus 121 ~~aw~a~~~w~yy~~TgD~~fL~~~~~p~l~~~A~F~~~~l~~~~~G~y~i~ps~sPE~~~~~~~G~~~~~~~n~t~d~~ 200 (465)
+++|+|+++|+||+||+|++||++++||+|+++|+||+++++++++|+|+|.||+|||+.+..| |.....++|++|||+
T Consensus 449 ~~awla~~lw~yy~~TgD~~fL~~~~~p~l~e~A~F~~~~l~~~~~g~y~i~p~~sPE~~~~~~-g~~~~~~~n~tytn~ 527 (803)
T 2rdy_A 449 GGVWLTQHLWEHYTFGEDEAYLRDTAYPIMKEAALFCLDWLIENEAGYLVTSPSTSPEQRFRIG-EKGYAVSSATTMDLS 527 (803)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHTHHHHHHHHHHHHHHHCEECTTSCEECSSBCBTTBCEEET-TEEECCBSCCHHHHH
T ss_pred hHHHHHHHHHHHHHhhCCHHHHHhhchHHHHHHHHHHHHhhEECCCCcEEECCCCcccccccCC-CcccccccChHHHHH
Confidence 9999999999999999999999999999999999999999998878999999999999876444 554568999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCcHHHHHHHHHHcCCCCCCccCCCCceeecccCCCCCCCCccchhhhhccCCCCCCCCCCCH
Q 012384 201 IIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLRPTKIAEDGSIMEWAQDFKDPEVHHRHLSHLFGLFPGHTITIEKNP 280 (465)
Q Consensus 201 ~v~~~l~~~~~~a~~Lg~~~~~~~~~w~~i~~~L~p~~~~~~G~l~ew~~~~~~~~~~hrh~s~L~~l~P~~~i~~~~~p 280 (465)
+++++|+.++++++.||++ ++++++|++++++|+|++++++|+++||..++.+.++.|||+|||+++||+.+|++.++|
T Consensus 528 ~~~~~l~~a~~a~~~Lg~~-~~~~~~w~~~~~~L~p~~i~~~G~l~ew~~d~~~~~~~hrh~s~L~~l~P~~~i~~~~~p 606 (803)
T 2rdy_A 528 LIAECFDNCIQAAKRLSID-EDFVKALSDAKQRLLPLQIGKRGQLQEWSNDFEDEDVHHRHVSHLVGIYPGRLITEQSAP 606 (803)
T ss_dssp HHHHHHHHHHHHHHHTTCC-HHHHHHHHHHHHTBCCCCBCTTSCBCSSSSCCEESCTTCSCCGGGTTTTTCCSSCTTTCH
T ss_pred HHHHHHHHHHHHHHHHCcC-HHHHHHHHHHHhcCCCCccCCCCceeecccccccCCcCCCchhhhhhhCchhhcCCCCCH
Confidence 9999999999999999999 888999999999999999999999999988777778899999999999999999988899
Q ss_pred HHHHHHHHHHhhhCCCCCChHHHHHHHHHHhcCChHHHHHHHHHHHhccCCcccccCCCCcccccccCCCCcccCccchh
Q 012384 281 DLCKAAEKTLQKRGEEGPGWSITWKTALWARLHDQEHAYRMVKRLFNLVDPEHEKHFEGGLYSNLFAAHPPFQIDANFGF 360 (465)
Q Consensus 281 ~l~~aa~~tl~~r~~~~~gws~~~~a~~aArlgd~e~A~~~l~~~~~~~~~~~~~~~~~g~~~nl~~~h~pfqidg~~g~ 360 (465)
+++++++++|+.|+++++|||++|+++++||||++|+|+++|.+.++.+++.+..+..+|+++|||+.|+|||||||+|+
T Consensus 607 ~l~~a~~~tle~r~~~~sgwS~~~~a~~aArLg~~~~A~~~l~~~l~~~~~~~~~~~~gg~~~nL~~~h~pfqidgn~G~ 686 (803)
T 2rdy_A 607 NLFEAAKTSLEIRGDEGTGWSLGWKISLWARFKDGNRCERLLSNMLTLIKEDESMQHRGGVYANLFGAHPPFQIDGNFSA 686 (803)
T ss_dssp HHHHHHHHHHHHHCSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHSCBCCTTCCCTTCCEECTTSCEESSSBCTHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHhhhccccccccCCCccCcccccCCCccccchhHH
Confidence 99999999999999999999999999999999999999999999998644433323457899999999999999999999
Q ss_pred HHHHHHHHhhccCCeEEeCCCCCccccCceeecceeeecceEEEEEEeCCeEEEEEEEeCCCCCcccceeeeecC-----
Q 012384 361 TAAVAEMLVQSTLNDLYLLPALPWDKWSSGCVKGLKARGGETVSICWKDGDLHEVGIYSNYSNNDHDSFKTLHYR----- 435 (465)
Q Consensus 361 ~~av~emLlqs~~g~i~l~PalP~~~W~~gs~~gL~arG~~~V~~~~~~g~~~~~~i~s~~~~~~~~~~~~~~~~----- 435 (465)
++||+||||||++|.|+|+|+|| ++|++++|+||++||+|+|+++|++|++++++|+|.+|++|+ |+++..
T Consensus 687 ~agi~emLlqs~~g~i~l~PaLP-~~W~~g~f~gl~~rG~~~v~~~w~~g~~~~~~i~s~~g~~~~---v~~~~~~~~~~ 762 (803)
T 2rdy_A 687 TAGIAEMLLQSHQGYLEFLPALP-DSWKDGYVKGLRGRGGYEVDLAWTNGALVKVEIVSTKTQTCE---VLTRISMRITE 762 (803)
T ss_dssp HHHHHHHHEECSSSSEEESTTCC-TTCCSEEEEEEEETTTEEEEEEEETTEEEEEEEEESSCEEEE---EECSSCCEEEE
T ss_pred HHHHHHHHHhccCCeEeECCCCC-ccCccCeEEEEEEcCcEEEEEEEECCEEEEEEEEECCCCeEE---EEECCEEEEec
Confidence 99999999999999999999999 999999999999999999999999999999999999999999 554431
Q ss_pred -C--------e--EEEEEccCCcEEEEeecccc
Q 012384 436 -G--------T--SVKVNLSAGKIYTFNRQLKC 457 (465)
Q Consensus 436 -~--------~--~~~~~~~~G~~~~i~~~~~~ 457 (465)
| . +++|.|++|++|+|+.....
T Consensus 763 ~g~~~~~~~~~~g~~~~~t~~G~~y~~~~~~~~ 795 (803)
T 2rdy_A 763 SGEEVEGDVLDSGRMSFQVEKGKRYVLNRTTDG 795 (803)
T ss_dssp TTEEECEEECGGGEEEEEECTTCEEEEEC----
T ss_pred CCcEEEeeccCceeEEEEecCCCEEEEeeCCCC
Confidence 1 1 27899999999999986543
No 3
>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3
Probab=100.00 E-value=4.8e-61 Score=526.86 Aligned_cols=380 Identities=12% Similarity=-0.022 Sum_probs=310.7
Q ss_pred cccc-hhhccch-----hh-HHHHHHhhhhhhccc-CCC---CCCCCC-C-CCCc--cccccccchhccccC-CCCcccc
Q 012384 4 HPWW-SFYSSLV-----DI-CLFLLHDLELRLPTC-RAY---GTKILV-Q-HGTP--HVNINLEMNYWQSLP-CNLSECQ 67 (465)
Q Consensus 4 ~~ww-~~~~~~~-----d~-~~~~~~~~rYll~ss-sr~---g~~p~~-l-~~dy--h~n~N~qm~ywp~~~-~n~~e~~ 67 (465)
++|| +||+++. |. .++...+++|+|+++ +|. +++|++ | +.+| |.+||+|++|||++. .|+||++
T Consensus 298 ~~~w~~~w~~~~i~i~gd~~~q~~~r~~~y~Ll~s~s~~~~~~~i~a~GL~g~~Y~G~~fWdtE~~~~P~~~~~~~pe~a 377 (754)
T 1h54_A 298 TAIWAQRWEKSDVVIKGDDESQQGIRFNLFQLFSTYYGEDARLNIGPKGFTGEKYGGATYWDTEAFAFPVYLGITDPKVT 377 (754)
T ss_dssp HHHHHHHHHTTCEEEESCHHHHHHHHHHHHHHHHHCCSSCTTCCCCTTTTSCCTTCSSBCTHHHHTHHHHHHHHSCHHHH
T ss_pred HHHHHHHhhhCcEEeCCCHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCcceechHHHHHHHHHhcCCHHHH
Confidence 5799 9999872 43 346788888888655 654 357775 5 5556 789999999999999 9999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHhcCCCceEEccccCCCCCCCCCCCCcccc---cCccCHHHHHHHHHHHHHhcCCHHHHHH
Q 012384 68 EPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADRGKVVWA---LWPMGGAWLCTHLWEHYNYTMDRDFLEK 144 (465)
Q Consensus 68 ~~l~~~~~~~l~~~r~~A~~~yG~~G~~~p~~~~~~g~~~~~~~~~~~~---~~~~~~aw~a~~~w~yy~~TgD~~fL~~ 144 (465)
++|++||++++|.||++|++ +|++||+|||++. .|.. .++.|. ...+.++|||+++|+||++|+|++||++
T Consensus 378 ~~ll~yr~~~l~~Ar~~A~~-~G~~Ga~~pW~s~-~G~e----~~~~w~~~~~q~Hi~a~ia~a~~~yy~~T~D~~fL~~ 451 (754)
T 1h54_A 378 RNLLMYRYKQLDGAYINAQE-QGLKGALFPMVTF-DGIE----CHNEWEITFEEIHRNGDIAFAIYNYTRYTGDDSYVLH 451 (754)
T ss_dssp HHHHHHHHTTHHHHHHHHHT-TTCCSCCCCSSBS-SSSB----CCCCHHHHTTCTHHHHHHHHHHHHHHHHHCCCTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCCcceeeeECc-CCCc----CCCCCccccceecchHHHHHHHHHHHHhcCCHHHHHh
Confidence 99999999999999999999 8999999998876 4432 123341 1134589999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhcccCC-CCeEEECCCCCC-CCCcCCCCCCccccccCchHHHHHHHHHHHHHHHHH--------H
Q 012384 145 RAYPLLEGCASFLLDWLIEGH-DGYLETNPSTSP-EHEFIAPDGKLACVSYSSTMDMAIIREVFSAIISAA--------E 214 (465)
Q Consensus 145 ~~~p~l~~~A~F~~~~l~~~~-~G~y~i~ps~sP-E~~~~~~~G~~~~~~~n~t~d~~~v~~~l~~~~~~a--------~ 214 (465)
+++|+|+++|+||++++.+++ +|+|+|.++++| |++. .++||+|||++++++|+.+++++ +
T Consensus 452 ~g~~~l~e~A~Fw~s~~~~~~~~g~y~i~~VtgPdEy~e---------~v~nn~ytn~~a~~~l~~a~~~~~~l~~~~~~ 522 (754)
T 1h54_A 452 EGAKVLTEISRFWADRVHFSKRNNQYMIHGVTGADEYEN---------NVDNNWDTNMLAQWTLKYTLEILGKVDQDTAK 522 (754)
T ss_dssp HHHHHHHHHHHHHHHHCEEETTTTEEECCSBCCSSTTSC---------SBSCCHHHHHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred CChHHHHHHHHHHHHheEEeCCCCEEEEccccCcccccC---------CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999875 799999999999 7763 48999999999999999999998 8
Q ss_pred HhCCCcHHHHHHHHHHcCCCCCCccCC---------CCceeecccCCCCCCCCccch------------------hhhhc
Q 012384 215 VLEKNEDALVEKVLKSLPRLRPTKIAE---------DGSIMEWAQDFKDPEVHHRHL------------------SHLFG 267 (465)
Q Consensus 215 ~Lg~~~~~~~~~w~~i~~~L~p~~~~~---------~G~l~ew~~~~~~~~~~hrh~------------------s~L~~ 267 (465)
.||++ +++.++|++++++|+++.+++ +++++||.. .+.+++|+|+ ++|++
T Consensus 523 ~lg~~-~~~~~~w~~i~~~l~~p~~~~~gv~~q~dg~~~l~ewd~--~~~~~~~~~l~~~~~~~~~~r~~~iKQAdvll~ 599 (754)
T 1h54_A 523 QLDVS-DEEKTKWQDIVDRMYLPYDKDLNIFVQHDGFLDKDIEPV--SSIPADQRPINQNWSWDKILRSPYIKQGDVLQG 599 (754)
T ss_dssp HHCCC-HHHHHHHHHHHHTBCCCEETTTTEECSSTTGGGSCCCCG--GGSCGGGCSGGGTSCHHHHHHSSCBSSCSHHHH
T ss_pred HhCCC-HHHHHHHHHHHhCCCCCccCCCCeeeccccccccccCch--hhccccCCChhcccccccccccccccchhHHHh
Confidence 89998 888999999999999765544 456778843 3444567765 56999
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCChHHHHHHHHHHhcCChHHHHHHHHHHHhccCCcccccCCCCccccccc
Q 012384 268 LFPGHTITIEKNPDLCKAAEKTLQKRGEEGPGWSITWKTALWARLHDQEHAYRMVKRLFNLVDPEHEKHFEGGLYSNLFA 347 (465)
Q Consensus 268 l~P~~~i~~~~~p~l~~aa~~tl~~r~~~~~gws~~~~a~~aArlgd~e~A~~~l~~~~~~~~~~~~~~~~~g~~~nl~~ 347 (465)
+||+..+ .+|+.++.....++.|+.++++||.++++++|||+|++++|+++|.+.+. .++.+
T Consensus 600 ~yp~~~~---~~~e~~~~~l~~Ye~rt~~~ssls~~~~ai~aArlg~~~~A~~~~~~~~~---------------~dl~d 661 (754)
T 1h54_A 600 IWDFIDD---YTPEQKKANFDFYEPLTVHESSLSPAIHSVLAADLHYEDKAVELYSRTAR---------------LDLDN 661 (754)
T ss_dssp HHHTTTS---SCHHHHHHHHHHHGGGBCCCSTTHHHHHHHHHHHTTCHHHHHHHHTTTTT---------------TTTTT
T ss_pred hccCCCC---CCHHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHcCCHHHHHHHHHHHhH---------------hhhcc
Confidence 9999653 35664444444445588888899999999999999999999999976554 23445
Q ss_pred CCCCcccCccc-hhHHHHHHHHhhcc------CCeEEeCCCCCccccCceeecceeeecceEEEEEEeCCeEEEEEEEeC
Q 012384 348 AHPPFQIDANF-GFTAAVAEMLVQST------LNDLYLLPALPWDKWSSGCVKGLKARGGETVSICWKDGDLHEVGIYSN 420 (465)
Q Consensus 348 ~h~pfqidg~~-g~~~av~emLlqs~------~g~i~l~PalP~~~W~~gs~~gL~arG~~~V~~~~~~g~~~~~~i~s~ 420 (465)
.|++++ ||++ |.++|+.+|++|+. +|.|+|.|+|| ++|+.++|+ |++||+ .++++|+++++ +|++.
T Consensus 662 ~~~~~~-~G~~~~~~gG~~~~~v~g~~Glr~~~~~L~l~P~LP-~~W~~~~~~-l~~rG~-~~~i~v~~~~~---~i~~~ 734 (754)
T 1h54_A 662 YNNDTT-DGLHITSMTGAWIAVVQGFAGMRVRDGQLHYAPFLP-KTWTSYTFR-QVFRDR-LIEVSVHADGP---HFKLL 734 (754)
T ss_dssp TTSCGG-GCCCGGGGGHHHHHHHTTTSCCEEETTEEEECCCCC-TTCSEEEEE-EEETTE-EEEEEEETTEE---EEEEE
T ss_pred cCCCCC-CCcccchhhHHHHHHHHHhhceeccCCEEEECCCCC-CCCceeEEE-EEECCe-EEEEEEECCEE---EEEEc
Confidence 666775 8876 89999999999987 78999999999 999999998 999999 68999999883 45555
Q ss_pred CCCCcc
Q 012384 421 YSNNDH 426 (465)
Q Consensus 421 ~~~~~~ 426 (465)
.|.+|+
T Consensus 735 ~g~~~~ 740 (754)
T 1h54_A 735 SGEPLT 740 (754)
T ss_dssp ESSCEE
T ss_pred CCCCEE
Confidence 566777
No 4
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=99.79 E-value=2.2e-18 Score=194.70 Aligned_cols=282 Identities=11% Similarity=0.064 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHhhHHHHHHHHHHHHHhcccCCCCeEEECCCCCCCCCc---CCCCCCccccccCchHH
Q 012384 122 GAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYLETNPSTSPEHEF---IAPDGKLACVSYSSTMD 198 (465)
Q Consensus 122 ~aw~a~~~w~yy~~TgD~~fL~~~~~p~l~~~A~F~~~~l~~~~~G~y~i~ps~sPE~~~---~~~~G~~~~~~~n~t~d 198 (465)
..|.+.++|+||++|||.+||+ +.||.|+++++|+.++. +++|.+.. |++.+ ..+.. .....++++
T Consensus 630 ~~~~i~~~~~yy~~tGD~~~L~-e~yp~lk~~l~~~~~~~--d~~GLl~~-----~~~~~~DW~d~~~---~~~G~~~~~ 698 (956)
T 2okx_A 630 TFFWILACREYAAHTGNEAFAA-RIWPAVKHTLTHYLEHI--DDSGLLNM-----AGWNLLDWAPIDQ---PNEGIVTHQ 698 (956)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHH-HHHHHHHHHHHHHHTTB--CTTSSBCC-----SSCCCCCSSSCCC---CSSSEEHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHH-HHHHHHHHHHHHHHhcC--CCCCCEEe-----CCCCccCccCCCC---CCCCcCHHH
Confidence 4688999999999999999997 59999999999999875 33674321 22111 00000 001126899
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHcCCCC-CC---ccCC-CCceeecccCCCCCCCCccchhhhhccCCCCC
Q 012384 199 MAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLR-PT---KIAE-DGSIMEWAQDFKDPEVHHRHLSHLFGLFPGHT 273 (465)
Q Consensus 199 ~~~v~~~l~~~~~~a~~Lg~~~~~~~~~w~~i~~~L~-p~---~~~~-~G~l~ew~~~~~~~~~~hrh~s~L~~l~P~~~ 273 (465)
+++++.+|+.++++++.||.+ + ..++|++.+++|. .+ -.++ .|.+.....+.......|++.+++++++ ++.
T Consensus 699 ~a~~~~al~~~a~lA~~LG~~-~-~a~~y~~~A~~lk~ai~~~~wd~~~g~y~d~~~~~g~~~~~~~~~s~~lall-~Gl 775 (956)
T 2okx_A 699 NLFLVKALRDSRALAAAAGAT-E-EADAFAARADLLAETINAVLWDEEKRAYIDCIHADGRRSDVYSMQTQVVAYL-CGV 775 (956)
T ss_dssp HHHHHHHHHHHHHHHHHTTCG-G-GGHHHHHHHHHHHHHHHHHSEETTTTEECSEECTTSCBCCCCBHHHHHHHHH-TTC
T ss_pred HHHHHHHHHHHHHHHHHhCCh-H-HHHHHHHHHHHHHHHHHHHhcCCCCCEEEeeecCCCCcccccccHHHHHHHH-hCC
Confidence 999999999999999999975 2 3456666666655 22 1222 2333222111111234567888866654 232
Q ss_pred CCCCCCHHHHHHHHHHHhh--hCCC--CCChHHHHHHHHHHhcCChHHHHHHHHHHHhccCCcccccCCCCcccccccCC
Q 012384 274 ITIEKNPDLCKAAEKTLQK--RGEE--GPGWSITWKTALWARLHDQEHAYRMVKRLFNLVDPEHEKHFEGGLYSNLFAAH 349 (465)
Q Consensus 274 i~~~~~p~l~~aa~~tl~~--r~~~--~~gws~~~~a~~aArlgd~e~A~~~l~~~~~~~~~~~~~~~~~g~~~nl~~~h 349 (465)
+ +++..+++++.++. ++.+ ++.|+..|.+...+|+|+.++|++++.+....... ...+++++.++.+
T Consensus 776 ~----p~~~~~av~~Ll~~~~~gy~~~Gt~w~~~~li~aLar~G~~d~A~~ll~~~~~~~~~-----~g~tt~~E~~d~~ 846 (956)
T 2okx_A 776 A----QGEREAVIEGYLSSPPPAFVQIGSPFMSFFYYEALEKAGRQTLMLDDIRRNYGQMLR-----YDATTCWEMYPNF 846 (956)
T ss_dssp S----CHHHHHHHHHHHHSCCTTSBCCCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----TTCSSCCSSCSSC
T ss_pred C----CHHHHHHHHHHhcCCCcccccCCChhHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh-----cCCCccceeccCC
Confidence 2 34444555555554 4443 67899889999999999999999999775542111 1124677777766
Q ss_pred CCc-------ccCccchhHHHHHHHHhhccCC---------eEEeCCCCCccccCceeecceeeecceEEEEEEe---CC
Q 012384 350 PPF-------QIDANFGFTAAVAEMLVQSTLN---------DLYLLPALPWDKWSSGCVKGLKARGGETVSICWK---DG 410 (465)
Q Consensus 350 ~pf-------qidg~~g~~~av~emLlqs~~g---------~i~l~PalP~~~W~~gs~~gL~arG~~~V~~~~~---~g 410 (465)
+|+ +++.|++..+|+.+||+|+..| .|+|.|++| +|+.+++++++.+| ..|+++|+ ++
T Consensus 847 ~~~~~~~~~~~~s~nh~Wsag~~~~L~q~l~GI~p~~pG~~~i~i~P~lp--~~~~~~~~~~~~~G-~~i~v~w~~~~~~ 923 (956)
T 2okx_A 847 AENRSNPDMLTRSHCHAWSAAPGYFLGSSILGVKRGADGWRTVDIAPQPC--DLTWAEGVVPLPQG-GHIAVSWEFVSAG 923 (956)
T ss_dssp CTTSSSTTSSCSCSCCGGGCTHHHHHHHTTSCEEECSGGGSEEEECCCCT--TCSEEEEEEECTTS-SEEEEEEEEEETT
T ss_pred CCCcccCCCcccccCcHHHHHHHHHHHHHhcCccccCCCCCEEEEEeCCC--CCCeEEEEEEcCCC-CEEEEEEEEccCC
Confidence 553 3578999999999999998876 599999999 59999999999998 47888887 55
Q ss_pred eEEEEEEEeCCCCCcccceeeee
Q 012384 411 DLHEVGIYSNYSNNDHDSFKTLH 433 (465)
Q Consensus 411 ~~~~~~i~s~~~~~~~~~~~~~~ 433 (465)
+ .+++|++..+.+++ |++|
T Consensus 924 ~-~~~~v~vP~g~~a~---v~lp 942 (956)
T 2okx_A 924 K-LKLRIEAPEDIEVN---VTLP 942 (956)
T ss_dssp E-EEEEEEEETTSEEE---ECCC
T ss_pred e-EEEEEEcCCCCEEE---EECc
Confidence 5 68888888888877 5555
No 5
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.15 E-value=4e-09 Score=115.96 Aligned_cols=307 Identities=12% Similarity=0.179 Sum_probs=175.4
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHhhHHHHHHHHHHHHHhcccCCCCeEEECCC--CCCCCCcCCCCCCccccccCchHHH
Q 012384 122 GAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYLETNPS--TSPEHEFIAPDGKLACVSYSSTMDM 199 (465)
Q Consensus 122 ~aw~a~~~w~yy~~TgD~~fL~~~~~p~l~~~A~F~~~~l~~~~~G~y~i~ps--~sPE~~~~~~~G~~~~~~~n~t~d~ 199 (465)
..|.+..+|+||++|||.+||+ +.||.|+...+|+..+. +++|.+..... ..+ .+. ++. ....-..++.+
T Consensus 386 ~l~wi~~~~~yy~~tGD~~~L~-e~~p~l~~~ld~~~~~~--d~~GL~~~~~G~W~~~--dW~--d~~-~~~~G~~~~~~ 457 (739)
T 3cih_A 386 TFYWFLSVYDYYMYSGDRHFVN-QLYPRMQTMMDYVLGRT--NKNGMVEGMSGDWVFV--DWA--DGY-LDKKGELSFEQ 457 (739)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHHHHTTB--CTTSCBCCCTTCBCCS--CCC--TTC-CCCSSEEHHHH
T ss_pred hHHHHHHHHHHHHHhCCHHHHH-HHHHHHHHHHHHHHHhc--CCCCCcccCCCCcccC--CCc--ccc-cCCCCcchHHH
Confidence 4566789999999999999997 59999999999998864 33674321110 000 000 000 00001146789
Q ss_pred HHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHcCCCC-CCc---c-CCCCceeecccCCCCCCCCccchhhhhccCCCCCC
Q 012384 200 AIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLR-PTK---I-AEDGSIMEWAQDFKDPEVHHRHLSHLFGLFPGHTI 274 (465)
Q Consensus 200 ~~v~~~l~~~~~~a~~Lg~~~~~~~~~w~~i~~~L~-p~~---~-~~~G~l~ew~~~~~~~~~~hrh~s~L~~l~P~~~i 274 (465)
+++...++.+.++|+.||.+ +..++|++.+++|. .+. . ++.|.+..-..+... ...+...+.+++++ .+.+
T Consensus 458 a~~y~al~~~a~lA~~lG~~--~~A~~y~~~A~~lk~a~~~~~wd~~~G~y~~~~~~G~~-~d~~~~~s~~laL~-~Gl~ 533 (739)
T 3cih_A 458 VLFCRSLETMALCADLVGDK--DGQQKYEKLASALKAKLEPTFWNNQKQAFVHNCVDGRQ-SDAVTRYANMFSVF-FDYL 533 (739)
T ss_dssp HHHHHHHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHHHHHHHEETTTTEECSEEETTEE-CSCCCHHHHHHHHH-TTCS
T ss_pred HHHHHHHHHHHHHHHHcCCh--HHHHHHHHHHHHHHHHHHHhccCcccCeeEeecCCCCc-CcccchHHhHHHHH-HCCC
Confidence 99999999999999999965 45788988888887 332 1 223433210001000 01112224455554 2333
Q ss_pred CCCCCHHHHHHHHHHHhhh-CC--CCCChHHHHHHHHHHhcCChHHHHHHHHHHHhc-cCCcccccCCCCcccccccC--
Q 012384 275 TIEKNPDLCKAAEKTLQKR-GE--EGPGWSITWKTALWARLHDQEHAYRMVKRLFNL-VDPEHEKHFEGGLYSNLFAA-- 348 (465)
Q Consensus 275 ~~~~~p~l~~aa~~tl~~r-~~--~~~gws~~~~a~~aArlgd~e~A~~~l~~~~~~-~~~~~~~~~~~g~~~nl~~~-- 348 (465)
+++..+.+.+.|..+ +. ..+.|-..+.....++.|+.|+|++++...... .+.. ..++.-.++.
T Consensus 534 ----~~e~~~~v~~~L~~~~~~~~~~tp~~~~~~~~aL~~~G~~d~A~~ll~~~w~~~v~~G------attl~E~~~~~~ 603 (739)
T 3cih_A 534 ----NADKQQAIKQSVLLNDEILKITTPYMRFYELEALCALGEQETVMKEMKAYWGGMLKAG------ATSFWEKYNPEE 603 (739)
T ss_dssp ----CHHHHHHHHHHTTTCTTSCCCCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTT------CSSCCSCCCTTC
T ss_pred ----CHHHHHHHHHHHhcCcccccccchhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCC------CceeEEeccccc
Confidence 355555555555433 21 234454455577779999999999998764331 1110 0011111111
Q ss_pred ----C-----CCcccCccchhHHHHHHHHhhcc--------C-CeEEeCCCCCccccCceeecceeeecceEEEEEEeCC
Q 012384 349 ----H-----PPFQIDANFGFTAAVAEMLVQST--------L-NDLYLLPALPWDKWSSGCVKGLKARGGETVSICWKDG 410 (465)
Q Consensus 349 ----h-----~pfqidg~~g~~~av~emLlqs~--------~-g~i~l~PalP~~~W~~gs~~gL~arG~~~V~~~~~~g 410 (465)
| .|+...-+++..++....|.|.- + ..|.|.|.+| . |+..+.+ +....| .|+++|+..
T Consensus 604 ~~~~~~~~~g~~~~~s~~HaW~ag~~~~l~~~ilGI~p~~pg~~~~~i~P~l~-~-l~~~~~~-~~t~~G-~I~~~w~~~ 679 (739)
T 3cih_A 604 SGTQHLAMYGRPYGKSLCHAWGASPIYLLGKYYLGVKPTKEGYKEFAVSPVLG-G-LKWMEGT-VPTPNG-DIHVYMDNK 679 (739)
T ss_dssp CGGGGGCBTTBTTCSCSSBGGGCTHHHHHHHHTSCEEEEEGGGTEEEECCCCT-T-CSEEEEE-EEETTE-EEEEEEESS
T ss_pred CCcccccccccccCcccccccccchHHHHHHHHhccCcCCCCccEEEEEecCC-C-CCEEEEE-EEcCCe-eEEEEEEcc
Confidence 1 11122335555555444444431 1 4699999998 4 8776664 666666 688888876
Q ss_pred eEEEEEEEeCCCCCcccceeeeecC--------------CeEEEEEccCCcEEEEeecccccccc
Q 012384 411 DLHEVGIYSNYSNNDHDSFKTLHYR--------------GTSVKVNLSAGKIYTFNRQLKCTNLH 461 (465)
Q Consensus 411 ~~~~~~i~s~~~~~~~~~~~~~~~~--------------~~~~~~~~~~G~~~~i~~~~~~~~~~ 461 (465)
++ +|+| . +++.+ |.+|.. .++.+|....|+.|+|+-++++-.-|
T Consensus 680 ~~-~v~v--P-~~~a~---v~lp~~~~~~~~~~~~~~~~sG~y~f~~~~~~~~~~~~~~~~~~~~ 737 (739)
T 3cih_A 680 TI-KVKA--T-EGKGY---LTIQSRRQPKANMGTVEKVSEGVWRLWIDSPEERIVTYRLEGHHHH 737 (739)
T ss_dssp EE-EEEE--S-SCEEE---EEEECSSCCEESSSCEEEEETTEEEEEECSSSCEEEECCC------
T ss_pred EE-EEEe--C-CCceE---EEECCeeceeccCceEEEecCceEEEEecCCcEEEEEEEecccccc
Confidence 53 4444 2 23444 445421 26788999999999999988765433
No 6
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=98.77 E-value=7.1e-08 Score=106.72 Aligned_cols=274 Identities=14% Similarity=0.131 Sum_probs=145.5
Q ss_pred CHHHHHHHHHHHHHhcCCHHHHHH------------hhHHHHHHHHHHHHHhcccCCCCeEEECC-CC-----------C
Q 012384 121 GGAWLCTHLWEHYNYTMDRDFLEK------------RAYPLLEGCASFLLDWLIEGHDGYLETNP-ST-----------S 176 (465)
Q Consensus 121 ~~aw~a~~~w~yy~~TgD~~fL~~------------~~~p~l~~~A~F~~~~l~~~~~G~y~i~p-s~-----------s 176 (465)
..+|+..++++|+++|||.+||++ ..|+-++.+.+|....+ +++|-..+.. .. .
T Consensus 416 ~~lW~i~av~~Y~~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~--g~~GL~~~g~~DWnD~ln~~~~~~~ 493 (811)
T 3qde_A 416 DPLWLILATAAYIKETGDYSILKEQVPFNNDPSKADTMFEHLTRSFYHVVNNL--GPHGLPLIGRADWNDCLNLNCFSTV 493 (811)
T ss_dssp HHHHHHHHHHHHHHHHCCGGGGGSEEEETTEEEEEEEHHHHHHHHHHHHHTCB--CTTSSBBCBTCSSSTTCCSSCCCCC
T ss_pred chhHHHHHHHHHHHHHCCHHHHHhhhhhhcCCcccccHHHHHHHHHHHHHhcC--CCCCCcccccCCchhhccccccccc
Confidence 368999999999999999999974 35888888888877643 3345322110 00 0
Q ss_pred C-CC-CcCCC-CCCccccccCchHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHcCCCCC-Cc---cCCCCceee-c
Q 012384 177 P-EH-EFIAP-DGKLACVSYSSTMDMAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLRP-TK---IAEDGSIME-W 248 (465)
Q Consensus 177 P-E~-~~~~~-~G~~~~~~~n~t~d~~~v~~~l~~~~~~a~~Lg~~~~~~~~~w~~i~~~L~p-~~---~~~~G~l~e-w 248 (465)
+ |. ....| .| ..--+.+.+++....|+.+.++|+.||. ++..++|++.+++|.. +. .++ +.+.. .
T Consensus 494 vg~~~~~vtp~~~----~~gesv~~~al~y~AL~~~a~lA~~lGd--~~~A~~~~~~A~~lk~a~~~~~Wdg-~~y~ra~ 566 (811)
T 3qde_A 494 PDESFQTTTSKDG----KVAESVMIAGMFVFIGKDYVKLCEYMGL--EEEARKAQQHIDAMKEAILKYGYDG-EWFLRAY 566 (811)
T ss_dssp TTSCTTTSCCCCC----SSCEEHHHHHHHHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHHSBCS-SSBCCEE
T ss_pred cCccccccccccC----CcccCHHHHHHHHHHHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHhccCc-CeEEEEE
Confidence 1 10 00000 00 0123689999999999999999999985 4567778888777762 21 111 11111 1
Q ss_pred ccCCC-----CCCCCccc-hhhhhccCCCCCCCCC-CCHHHHHHHHHHHhhh-CC-------------------------
Q 012384 249 AQDFK-----DPEVHHRH-LSHLFGLFPGHTITIE-KNPDLCKAAEKTLQKR-GE------------------------- 295 (465)
Q Consensus 249 ~~~~~-----~~~~~hrh-~s~L~~l~P~~~i~~~-~~p~l~~aa~~tl~~r-~~------------------------- 295 (465)
..+.. .....+-. .+.-..++- +..+++ .....++++.+.|... |-
T Consensus 567 ~~dg~~~gs~~~~~~qi~~~~q~~avls-Gia~~e~ra~~~m~~v~~~L~t~~Glrll~p~f~~~~~d~g~~~~Y~pg~~ 645 (811)
T 3qde_A 567 DDFGRKVGSKENEEGKIFIESQGFCVMA-EIGLEDGKALKALDSVKKYLDTPYGLVLQNPAFTRYYIEYGEISTYPPGYK 645 (811)
T ss_dssp CTTSCEESSTTSSSCCEESHHHHHHHHT-TCSSSSSHHHHHHHHHHHHHCCTTCCCSEESCCCSCCTTTGGGGTSCTTST
T ss_pred cCCCCCCCccCCCCceEEecchhHHHHh-CCCCchHHHHHHHHHHHHHhCCCcceEeecCCccccCCCCCceeccCCCcc
Confidence 11100 00011111 122223332 222221 1122334444444211 10
Q ss_pred -CCCCh--HHHHHHHHHHhcCChHHHHHHHHHHHhccCCcc--cccCCCCccccccc-C-CCCcccCc---cchhHHHHH
Q 012384 296 -EGPGW--SITWKTALWARLHDQEHAYRMVKRLFNLVDPEH--EKHFEGGLYSNLFA-A-HPPFQIDA---NFGFTAAVA 365 (465)
Q Consensus 296 -~~~gw--s~~~~a~~aArlgd~e~A~~~l~~~~~~~~~~~--~~~~~~g~~~nl~~-~-h~pfqidg---~~g~~~av~ 365 (465)
.+.-| ..+|.++..|++|++|+|++++..+......++ .....-..+.++.. . +|.+...+ ..|.++-+.
T Consensus 646 enG~iy~H~~~w~~~a~a~~G~~~~A~~~~~~l~p~~~~~~~~~~~~~Py~~~~~~~~~~~p~~Gr~~~~w~tGsa~w~~ 725 (811)
T 3qde_A 646 ENAGIFCHNNAWIICAETVVGRGDMAFDYYRKIAPAYIEDVSDIHKLEPYVYAQMVAGKDAKRHGEAKNSWLTGTAAWNF 725 (811)
T ss_dssp TTTCEEHHHHHHHHHHHHHTTCHHHHHHHHHHHCGGGSGGGHHHHCSCTTSCEEEECCTTSTTTTCEEEESCSTHHHHHH
T ss_pred ccccccchHHHHHHHHHHHcCCHHHHHHHHHHhChhhhcchhhhcCcCcEEeccccccccCCCCCCCcchhHHHHHHHHH
Confidence 11223 456788888999999999999988765322110 00001122222211 1 12221111 123332222
Q ss_pred HHHh------hccCCeEEeCCCCCccccCceeecceeeecc-eEEEEE
Q 012384 366 EMLV------QSTLNDLYLLPALPWDKWSSGCVKGLKARGG-ETVSIC 406 (465)
Q Consensus 366 emLl------qs~~g~i~l~PalP~~~W~~gs~~gL~arG~-~~V~~~ 406 (465)
-+++ +-+.+.|.|.|+|| +.|+..+++ ++.+|. +.|.++
T Consensus 726 ~~~ve~~lGl~~~~~~L~i~P~LP-~~w~~~~~~-~~~~g~~~~I~v~ 771 (811)
T 3qde_A 726 VAISQWILGVKPDYDGLKIDPCIP-KAWDGYKVT-RYFRGSTYEITVK 771 (811)
T ss_dssp HHHHHTTSCEEEETTEEEECCBCC-TTCCEEEEE-EEETTEEEEEEEE
T ss_pred HHHHHHhceeEEECCEEEEeCcCC-cccCcEEEE-EEECCEEEEEEEE
Confidence 2333 34568899999999 999998998 788776 344443
No 7
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=98.75 E-value=5.7e-08 Score=107.48 Aligned_cols=273 Identities=15% Similarity=0.089 Sum_probs=142.8
Q ss_pred CHHHHHHHHHHHHHhcCCHHHHHH------------hhHHHHHHHHHHHHHhcccCCCCeEEEC---------C---CCC
Q 012384 121 GGAWLCTHLWEHYNYTMDRDFLEK------------RAYPLLEGCASFLLDWLIEGHDGYLETN---------P---STS 176 (465)
Q Consensus 121 ~~aw~a~~~w~yy~~TgD~~fL~~------------~~~p~l~~~A~F~~~~l~~~~~G~y~i~---------p---s~s 176 (465)
..+|+...+++|++.|||.+||++ ..|+.++.+.+|....+ +++|-..+. . +..
T Consensus 423 ~~lWl~~av~~Yi~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~--g~~GLp~~g~gDWnD~ln~~~~~~~ 500 (822)
T 3rrs_A 423 DPLWLIAGTAAYIKETGDFSILDEPVPFDNEPGSEVPLFEHLTRSFEFTVTHR--GPHGLPLIGRADWNDCLNLNCFSTT 500 (822)
T ss_dssp HHHHHHHHHHHHHHHHCCGGGGGSEECSTTCTTCCEEHHHHHHHHHHHHHHSB--CTTSSBBCBTCSSSTTCCTTCCCCS
T ss_pred hHhHHHHHHHHHHHHHCCHHHHHhhhhhhccccccccHHHHHHHHHHHHHhcC--CCCCCcccCCCcchhhccccccccc
Confidence 368999999999999999999974 36778889999988654 324432211 0 000
Q ss_pred C-CC-CcCCC-CCCccccccCchHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHcCCCC-CCc---cCCCCce-eec
Q 012384 177 P-EH-EFIAP-DGKLACVSYSSTMDMAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLR-PTK---IAEDGSI-MEW 248 (465)
Q Consensus 177 P-E~-~~~~~-~G~~~~~~~n~t~d~~~v~~~l~~~~~~a~~Lg~~~~~~~~~w~~i~~~L~-p~~---~~~~G~l-~ew 248 (465)
+ |. ....| .| ..--+.+.+++....|+.+.++|+.+|.+ +..++|++.+++|. -+. .++ +.+ ...
T Consensus 501 vg~~~~~~~p~~~----~~Gesv~~~al~y~AL~~~a~lA~~~G~~--~~A~~~~~~A~~lk~a~~~~~Wdg-~~y~ra~ 573 (822)
T 3rrs_A 501 PGESFQTTENQAG----GVAESTFIAAQFVLYGEQYAELAARRGLA--DVADRARGHVAEMRDALLTDGWDG-SWFLRAY 573 (822)
T ss_dssp TTCCTTTCCSSCC----CCCEEHHHHHHHHHHHHHHHHHHHHTTCH--HHHHHHHHHHHHHHHHHHTTTBCS-SSBCCEE
T ss_pred ccccccccccccC----CccccHHHHHHHHHHHHHHHHHHHHcCCh--HHHHHHHHHHHHHHHHHHHhccCc-ceeEEEE
Confidence 1 10 00000 00 01236899999999999999999999854 56677877777766 221 111 111 111
Q ss_pred ccCCCC-----CCCCccc-hhhhhccCCCCCCCCC----CC---HHHHHHHHHHHhhh-C-------------C------
Q 012384 249 AQDFKD-----PEVHHRH-LSHLFGLFPGHTITIE----KN---PDLCKAAEKTLQKR-G-------------E------ 295 (465)
Q Consensus 249 ~~~~~~-----~~~~hrh-~s~L~~l~P~~~i~~~----~~---p~l~~aa~~tl~~r-~-------------~------ 295 (465)
..+... ....+-. .++-..++- +..+++ .+ ...++.+.+.|... | +
T Consensus 574 d~dg~~~gs~~~~~~~i~~~~q~~avls-Gia~~e~~~~~~~~a~~al~~v~~~L~t~~Girll~p~f~~~~~~~g~~~~ 652 (822)
T 3rrs_A 574 DYYGNPIGTDAHDEGKIWIEPQGFAVMA-GVGVGEGPQDTDAPAIKALDSVNEMLATDHGMVLQYPAYTTYQVHMGEVST 652 (822)
T ss_dssp CTTSCEESCTTSSSCCEEHHHHHHHHHT-TTTCCSSTTCTTSHHHHHHHHHHHHTEETTEEBSEESCCSSCCTTSTTGGG
T ss_pred cCCCCCccccCCCCceEEeccchhHhhc-CCCCcccccchHHHHHHHHHHHHHHcCCCCeEEEcCCCcccccCCCCcccc
Confidence 111100 0011111 112123331 222221 01 11223333333110 0 0
Q ss_pred -------CCC--ChHHHHHHHHHHhcCChHHHHHHHHHHHhccCCcc--cccCCCCccccccc-C-CCCcccCc---cch
Q 012384 296 -------EGP--GWSITWKTALWARLHDQEHAYRMVKRLFNLVDPEH--EKHFEGGLYSNLFA-A-HPPFQIDA---NFG 359 (465)
Q Consensus 296 -------~~~--gws~~~~a~~aArlgd~e~A~~~l~~~~~~~~~~~--~~~~~~g~~~nl~~-~-h~pfqidg---~~g 359 (465)
.+. ....+|.++..|++|++++|++++..+......++ .....-..++++.. . +|.+...+ ..|
T Consensus 653 Y~pg~~enG~iy~H~~~w~~~a~a~~G~~~~A~~~~~~l~p~~~~~~~~~~~~~Py~~~~~~~~~~~p~~G~~~~~w~tG 732 (822)
T 3rrs_A 653 YPPGYKENGGIFCHNNPWVIIAETVVGRGGRAFDYYKRITPAYREDISDVHRLEPYVYAQMIAGKEAVRHGEAKNSWLTG 732 (822)
T ss_dssp SCTTBTTBTCEETTTHHHHHHHHHHHTCHHHHHHHHHHHCHHHHGGGHHHHCSCSSSCEEEECCTTSTTTTCEEEESSST
T ss_pred cCCCccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhCcccccchhHhhccCcEEEeccccccCCCCCCCccchhhhh
Confidence 011 13467888888999999999999988664211110 00001122222211 1 11111111 123
Q ss_pred hHHHHHHHHh------hccCCeEEeCCCCCccccCceeecceeeecc-eEEEE
Q 012384 360 FTAAVAEMLV------QSTLNDLYLLPALPWDKWSSGCVKGLKARGG-ETVSI 405 (465)
Q Consensus 360 ~~~av~emLl------qs~~g~i~l~PalP~~~W~~gs~~gL~arG~-~~V~~ 405 (465)
.++-+.-+++ +-..+.|.|.|+|| +.|+..+++ ++.+|. +.|.+
T Consensus 733 sa~w~~~~lve~~LGlr~~~~~L~i~P~LP-~~w~~~~~~-~~~~g~~~~I~v 783 (822)
T 3rrs_A 733 TAAWNFVTVSQYLLGVRPEYDGLVVDPQIG-PDVPSFTVT-RVARGATYEITV 783 (822)
T ss_dssp HHHHHHHHHHHTTSCEEECSSEEEECCCCC-TTCCEEEEE-EEETTEEEEEEE
T ss_pred hHHHHHHHHHHhEEeEEEECCEEEEeCCCC-CcCCcEEEE-EEECCEEEEEEE
Confidence 3322222333 34568899999999 999999998 788776 34444
No 8
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=98.47 E-value=8.1e-07 Score=98.63 Aligned_cols=102 Identities=17% Similarity=0.224 Sum_probs=74.3
Q ss_pred CHHHHHHHHHHHHHhcCCHHHHHHhhHHH-----------HHHHHHHHHHhcccCCCCeEEECCCCCCCCCcCCCCCCcc
Q 012384 121 GGAWLCTHLWEHYNYTMDRDFLEKRAYPL-----------LEGCASFLLDWLIEGHDGYLETNPSTSPEHEFIAPDGKLA 189 (465)
Q Consensus 121 ~~aw~a~~~w~yy~~TgD~~fL~~~~~p~-----------l~~~A~F~~~~l~~~~~G~y~i~ps~sPE~~~~~~~G~~~ 189 (465)
...|+...+|+||++|||.+||+ +.||. |+.+.+|...+. +++|-...... .+. |+...
T Consensus 427 ~~lw~~~~~~~y~~~tGD~~~L~-e~~p~~~~~~~~v~e~~~~~~~~~~~~~--~~~GL~~~~~~-----DW~--D~~~~ 496 (807)
T 1v7w_A 427 DHLWLIPTICKYVMETGETSFFD-QMIPYADGGEASVYEHMKAALDFSAEYV--GQTGICKGLRA-----DWN--DCLNL 496 (807)
T ss_dssp GGGGHHHHHHHHHHHHCCGGGGG-CEEECTTSCEEEHHHHHHHHHHHHHHSB--CTTSCBEEETC-----SSS--TTCCC
T ss_pred hhhHHHHHHHHHHHHhCCHHHHh-cccccccCCcchHHHHHHHHHHHHHhcC--CCCCCcccCCC-----CCC--CcCCC
Confidence 45799999999999999999997 58887 999999988864 34674332110 000 00000
Q ss_pred ccccCchHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHcCCCC
Q 012384 190 CVSYSSTMDMAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLR 235 (465)
Q Consensus 190 ~~~~n~t~d~~~v~~~l~~~~~~a~~Lg~~~~~~~~~w~~i~~~L~ 235 (465)
. ..-+.+.++++...|+.+.++|+.||.+ +..++|++.+++|.
T Consensus 497 ~-~g~~v~~~a~~y~al~~~a~la~~lG~~--~~a~~~~~~A~~lk 539 (807)
T 1v7w_A 497 G-GGESSMVSFLHFWALQEFIDLAKFLGKD--QDVNTYTEMAANVR 539 (807)
T ss_dssp E-EEEEHHHHHHHHHHHHHHHHHHHHHTCH--HHHHHHHHHHHHHH
T ss_pred C-CCeehhHHHHHHHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHH
Confidence 0 1236889999999999999999999954 46778888888876
No 9
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=98.09 E-value=7.3e-06 Score=83.81 Aligned_cols=191 Identities=9% Similarity=0.060 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHhhHHHHHHHHHHHHHhcccCC-CCeEEE-----------------------------
Q 012384 122 GAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGH-DGYLET----------------------------- 171 (465)
Q Consensus 122 ~aw~a~~~w~yy~~TgD~~fL~~~~~p~l~~~A~F~~~~l~~~~-~G~y~i----------------------------- 171 (465)
.+......|+||+.|+|.+|+.+.....++.+++|+..-...+. .|-|..
T Consensus 182 la~~L~la~~Yy~~TgD~~~f~~~w~~av~~il~~l~~eq~~~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGLi~S~ 261 (489)
T 2p0v_A 182 LCYPIRLAYHYWKTTGDASVFSDEWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERALDTMTNDGWGNPVKPVGLIASA 261 (489)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSSHHHHHHHHHHHHHHHHTTCSSCSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSCCCCS
T ss_pred hHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHhcccCCCCCceEeecCCCcccccccCCCCCccCCCCceeCC
Confidence 45677789999999999999987555899999999988433331 244443
Q ss_pred -CCCCCCCCCcCCCCCCccccccCchHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHcCCCCC-C---ccC---CCC
Q 012384 172 -NPSTSPEHEFIAPDGKLACVSYSSTMDMAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLRP-T---KIA---EDG 243 (465)
Q Consensus 172 -~ps~sPE~~~~~~~G~~~~~~~n~t~d~~~v~~~l~~~~~~a~~Lg~~~~~~~~~w~~i~~~L~p-~---~~~---~~G 243 (465)
.||..+|... =.+++|+++...|+.+.++++.++.+ .++.++|+++++.|.. + -+. +.|
T Consensus 262 fRPSDDa~~yg------------~~ipSN~~a~v~L~~aaeia~~v~~d-~~la~~~~~lA~eI~~gI~~~gv~~~p~~G 328 (489)
T 2p0v_A 262 FRPSDDATTFQ------------FLVPSNFFAVTSLRKAAEILNTVNRK-PALAKECTALADEVEKALKKYAVCNHPKYG 328 (489)
T ss_dssp BCTTSCBCSSS------------EEHHHHHHHHHHHHHHHHHHHHTSCC-HHHHHHHHHHHHHHHHHHHHHSEEEETTTE
T ss_pred CCCCCcchhcC------------cchHHHHHHHHHHHHHHHHHHHhccC-HHHHHHHHHHHHHHHHHHHHhCEecCCCCc
Confidence 2222222111 15899999999999999999999977 7788899888888763 2 111 134
Q ss_pred ceeecccCCCCC--CCCccchhhhhccCCCCCCCCCCCHHHHHHHHHHHhhh-------C-------CCCC----ChHHH
Q 012384 244 SIMEWAQDFKDP--EVHHRHLSHLFGLFPGHTITIEKNPDLCKAAEKTLQKR-------G-------EEGP----GWSIT 303 (465)
Q Consensus 244 ~l~ew~~~~~~~--~~~hrh~s~L~~l~P~~~i~~~~~p~l~~aa~~tl~~r-------~-------~~~~----gws~~ 303 (465)
.+..+-.+.... -.+.-..+.|+.+.-++-+++ +||-... -++.+... | ...+ .|-.+
T Consensus 329 ~ifAyEVDG~G~~~~mDDanvpSLLslPylG~~~~-dDpiy~n-Tr~~IlS~~NPyy~~G~~~~GIGspH~~~~~~Wpms 406 (489)
T 2p0v_A 329 KIYAFEVDGFGNQLLMDDANVPSLIALPYLGDVKV-TDPIYQN-TRKFVWSEDNPYFFKGSAGEGIGGPHIGYDMIWPMS 406 (489)
T ss_dssp EEECSEECSSSCEECCCCSSSSCSTTHHHHTSSCT-TCHHHHH-HHHHHTSTTSTTEEECSSCEEECCTTTCTTEECHHH
T ss_pred cEEEEEecCCCCcccCCCCCccHHHHHHHhCCCCC-CCHHHHH-HHHHHHhhcCCcccccccccCCCCCCCCCCchHHHH
Confidence 333221121100 011223345656544555655 5776533 33333221 1 1122 35433
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHhc
Q 012384 304 WKTALWARLHDQEHAYRMVKRLFNL 328 (465)
Q Consensus 304 ~~a~~aArlgd~e~A~~~l~~~~~~ 328 (465)
. ++.+...+|.+++.++|+++++.
T Consensus 407 l-l~~alts~d~~E~~~~L~~l~~t 430 (489)
T 2p0v_A 407 I-MMKAFTSQNDAEIKTCIKMLMDT 430 (489)
T ss_dssp H-HHHHHTCCCHHHHHHHHHHHHHT
T ss_pred H-HHHHHhcCCHHHHHHHHHHHHhh
Confidence 2 11223468999999999998873
No 10
>3c68_A Uncharacterized protein YGJK; GH63, processing alpha-glucosidase, alpha/alpha barrel, hydrolase; HET: BMA; 1.50A {Escherichia coli} PDB: 3c67_A* 2ds3_A* 3c69_A* 3d3i_A
Probab=97.46 E-value=0.0036 Score=68.65 Aligned_cols=44 Identities=23% Similarity=0.312 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhcCCHHHHHHhhHHHHHHHHHHHHHhcccCCCCe
Q 012384 124 WLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGY 168 (465)
Q Consensus 124 w~a~~~w~yy~~TgD~~fL~~~~~p~l~~~A~F~~~~l~~~~~G~ 168 (465)
+.+.++|+||+.|+|.+||+ +.||.|+...+||......+.+|.
T Consensus 395 l~~~av~~yy~~tgD~~fL~-e~~P~L~~~~~w~~~~rd~d~~GL 438 (761)
T 3c68_A 395 LAAWSVMEVYNVTQDKTWVA-EMYPKLVAYHDWWLRNRDHNGNGV 438 (761)
T ss_dssp CHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHHHHHHSCTTCSSC
T ss_pred HHHHHHHHHHHHhCCHHHHH-HHHHHHHHHHHHHHhCCCCCcCcc
Confidence 45678999999999999997 599999999999999865455673
No 11
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=97.38 E-value=0.0016 Score=73.46 Aligned_cols=131 Identities=13% Similarity=-0.010 Sum_probs=86.3
Q ss_pred ccCCCCccccHHHHHHHHHHHHhHHHHHHHhcCCCceEEccccCCCCCCCCCCCCcccccCc-cCHHHHHHHHHHHHHhc
Q 012384 58 SLPCNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADRGKVVWALWP-MGGAWLCTHLWEHYNYT 136 (465)
Q Consensus 58 ~~~~n~~e~~~~l~~~~~~~l~~~r~~A~~~yG~~G~~~p~~~~~~g~~~~~~~~~~~~~~~-~~~aw~a~~~w~yy~~T 136 (465)
+...+++|.++..++|+.+... ..+|-+.| .-.+.| .+.|..-+ -..++++..+|+|++.
T Consensus 341 ll~~G~~e~A~~~l~~L~~~Q~----------~~~G~~~~-~y~i~G-------~~~w~~~Q~D~~g~~l~~~~~~~~~- 401 (1020)
T 1ulv_A 341 LLAAGDEEAAARGVEWLFTYQQ----------QPDGHFPQ-TSRVDG-------TIGQNGIQLDETAFPILLANQIGRT- 401 (1020)
T ss_dssp HHHHTCHHHHHHHHHHHHHHTC----------CTTSCCCS-CBCTTS-------CBCCCCCBTHHHHHHHHHHHHHTCC-
T ss_pred HHHcCCHHHHHHHHHHHHHHhc----------CCCCCeee-EEecCC-------CcCCCCccCccchHHHHHHHHHHhc-
Confidence 3457789999999999865431 12343322 221222 12343111 2356777888888763
Q ss_pred CCHHHHHHhhHH-HHHHHHHHHHHhcccCCCCeEEECCCCCC-CCCcCCCCCCccccccCchHHHHHHHHHHHHHHHHHH
Q 012384 137 MDRDFLEKRAYP-LLEGCASFLLDWLIEGHDGYLETNPSTSP-EHEFIAPDGKLACVSYSSTMDMAIIREVFSAIISAAE 214 (465)
Q Consensus 137 gD~~fL~~~~~p-~l~~~A~F~~~~l~~~~~G~y~i~ps~sP-E~~~~~~~G~~~~~~~n~t~d~~~v~~~l~~~~~~a~ 214 (465)
| +..|| +++.+++|..++- ..|..+. |... | -.+|+.++++..|..++++|+
T Consensus 402 -d-----~~~w~~~v~~al~~i~~~g---------~~~~~~~WEe~~----g-------~~~~t~~~~~~AL~~aa~lA~ 455 (1020)
T 1ulv_A 402 -D-----AGFYRNELKPAADYLVAAG---------PKTPQERWEETG----G-------YSTSTLASQIAALAAAADIAG 455 (1020)
T ss_dssp -C-----HHHHHHTHHHHHHHHHHHC---------SCBSBCTTSSCC----B-------EEHHHHHHHHHHHHHHHHHHH
T ss_pred -C-----HHHHHHHHHHHHHHHHHhC---------CCCChhhhcccC----C-------cCHHHHHHHHHHHHHHHHHHH
Confidence 5 36899 9999999998872 1223333 4331 2 278999999999999999999
Q ss_pred HhCCCcHHHHHHHHHHcCCCC
Q 012384 215 VLEKNEDALVEKVLKSLPRLR 235 (465)
Q Consensus 215 ~Lg~~~~~~~~~w~~i~~~L~ 235 (465)
.+|.+ +..++|++.+++|.
T Consensus 456 ~~G~~--~~a~~w~~~Ad~i~ 474 (1020)
T 1ulv_A 456 KNGDA--GSAAVYRATADEWQ 474 (1020)
T ss_dssp HTTCH--HHHHHHHHHHHHHH
T ss_pred HcCCh--hHHHHHHHHHHHHH
Confidence 99964 56788888888776
No 12
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=97.22 E-value=0.00034 Score=71.42 Aligned_cols=44 Identities=18% Similarity=0.129 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHhcCC----HHHHHHhhHHHHHHHHHHHHHhcccCCCCe
Q 012384 124 WLCTHLWEHYNYTMD----RDFLEKRAYPLLEGCASFLLDWLIEGHDGY 168 (465)
Q Consensus 124 w~a~~~w~yy~~TgD----~~fL~~~~~p~l~~~A~F~~~~l~~~~~G~ 168 (465)
+.+..+|+||+.|+| .+||+ +.||.|+...+||.+....+.+|.
T Consensus 106 ~~~~~~~~~~~~tgD~~~~~~~L~-~~~p~l~~~~~~~~~~~d~~~~Gl 153 (420)
T 2z07_A 106 VVATVVRYLYEKDPDRDRARERAR-YLFPKLLAFHRWLYHARDPYRTGL 153 (420)
T ss_dssp CHHHHHHHHHHHCSCHHHHHHHHH-HHHHHHHHHHHHHHHHHCTTCCSC
T ss_pred HHHHHHHHHHHhCccchhHHHHHH-HHHHHHHHHHHHHhcCCCCCCCCc
Confidence 467778999999999 99997 599999999999998854444664
No 13
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=96.52 E-value=0.0033 Score=65.38 Aligned_cols=93 Identities=9% Similarity=0.119 Sum_probs=69.6
Q ss_pred CHHHHHHHHHHHHHhcCCHHHH--------------HHhhH-HHHHHHHHHHHHhcccCCCCeEEECCCCCC-CCCcCCC
Q 012384 121 GGAWLCTHLWEHYNYTMDRDFL--------------EKRAY-PLLEGCASFLLDWLIEGHDGYLETNPSTSP-EHEFIAP 184 (465)
Q Consensus 121 ~~aw~a~~~w~yy~~TgD~~fL--------------~~~~~-p~l~~~A~F~~~~l~~~~~G~y~i~ps~sP-E~~~~~~ 184 (465)
+.+..+..+|.|++...+.+++ .+..| |+++..++|...+-.. |+.+. |...
T Consensus 146 ~~g~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~v~~~w~~---------pd~dlWEer~--- 213 (492)
T 2fba_A 146 GPALRAYAISRYLNDVNSLNEGKLVLTDSGDINFSSTEDIYKNIIKPDLEYVIGYWDS---------TGFDLWEENQ--- 213 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCCSSTTCTTCSCSSHHHHHHHTHHHHHHHHHHHTTS---------CEECTTSCCE---
T ss_pred chhHHHHHHHHHHHHhhccccchhhhhhhccccccccHHHHHHHHHHHHHHHHHhcCC---------CCCCCcCccC---
Confidence 3678888899888877666554 02466 8999999998887422 44455 6652
Q ss_pred CCCccccccCchHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHcCCCC
Q 012384 185 DGKLACVSYSSTMDMAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLR 235 (465)
Q Consensus 185 ~G~~~~~~~n~t~d~~~v~~~l~~~~~~a~~Lg~~~~~~~~~w~~i~~~L~ 235 (465)
| -.+||.++++..|..++++|+.+|. ++..++|++.++++.
T Consensus 214 -g-------~~~~T~~~~~~AL~~aa~lA~~~g~--~~~a~~w~~~ad~i~ 254 (492)
T 2fba_A 214 -G-------RHFFTSLVQQKALAYAVDIAKSFDD--GDFANTLSSTASTLE 254 (492)
T ss_dssp -E-------CCHHHHHHHHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHH
T ss_pred -C-------CChHHHHHHHHHHHHHHHHHHHcCC--chHHHHHHHHHHHHH
Confidence 1 2889999999999999999999985 456778887776655
No 14
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*
Probab=96.36 E-value=0.0088 Score=60.74 Aligned_cols=203 Identities=10% Similarity=0.082 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHhhHHHHHHHHHHHHHhcccCCCCeEEECCCC-CC-CCCc-------CCCCCCcc---
Q 012384 122 GAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYLETNPST-SP-EHEF-------IAPDGKLA--- 189 (465)
Q Consensus 122 ~aw~a~~~w~yy~~TgD~~fL~~~~~p~l~~~A~F~~~~l~~~~~G~y~i~ps~-sP-E~~~-------~~~~G~~~--- 189 (465)
-+......++||+.|||.+|+.+....-++.+.+-|..-...+..+.|...-.+ .+ |.-+ ..+.|...
T Consensus 165 L~~~l~La~~y~~~Tgd~~~f~~~w~~a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~F 244 (463)
T 3p2c_A 165 LCYPLRLAYHYWKTTGDASIFNEEWIQAITNVLKTFKEQQRKDGVGPYKFQRKTERALDTVSNDGLGAPVKPVGLIVSSF 244 (463)
T ss_dssp HHHHHHHHHHHHHHHCCCTTCSHHHHHHHHHHHHHHHHTTCSSSSCSCCCBCCBSCGGGSCHHHHTCSCCCCSSCCBCSB
T ss_pred hhHHHHHHHHHHHhhCChhhhcHHHHHHHHHHHHHHHHHhccCCCCCceEeecCCCCCcccCCCCcCCCcCCCCceecCC
Confidence 445566778999999999999877777777777777654333223444433221 22 2211 01111100
Q ss_pred ccccC------chHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHcCCCCC-C---c-c--CCCCceeecccCCCCCC
Q 012384 190 CVSYS------STMDMAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLRP-T---K-I--AEDGSIMEWAQDFKDPE 256 (465)
Q Consensus 190 ~~~~n------~t~d~~~v~~~l~~~~~~a~~Lg~~~~~~~~~w~~i~~~L~p-~---~-~--~~~G~l~ew~~~~~~~~ 256 (465)
...+| .+..|+++.-.|+.+.++++.++.+ .++.++|+++++.+.. + - + ...|.+..+-.++....
T Consensus 245 RPSDDa~~~~~~iPsN~~a~v~L~~aaei~~~l~~d-~~la~~~~~lA~eIr~gI~k~gvv~~p~~G~iyAyEVDG~Gs~ 323 (463)
T 3p2c_A 245 RPSDDATTLQFLVPSNFFAVSSLRKAAEILEKVNKK-TALSKECKDLAQEVETALKKYAVYNHPKYGKIYAFEVDGFGNH 323 (463)
T ss_dssp CTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCC-HHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSSCE
T ss_pred CCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhccC-HHHHHHHHHHHHHHHHHHHHhCEecCCCCceEEEEEEecCCCc
Confidence 01222 3579999999999999999999777 7788888888887762 1 1 1 12344443322221110
Q ss_pred --CCccchhhhhccCCCCCCCCCCCHHHHHHHHHHHhhh-------CC-----C------CCChHHHHHHHHHHhcCChH
Q 012384 257 --VHHRHLSHLFGLFPGHTITIEKNPDLCKAAEKTLQKR-------GE-----E------GPGWSITWKTALWARLHDQE 316 (465)
Q Consensus 257 --~~hrh~s~L~~l~P~~~i~~~~~p~l~~aa~~tl~~r-------~~-----~------~~gws~~~~a~~aArlgd~e 316 (465)
.+.-..+.|+.+.-++-++. +||-. +.-++.+..+ |. + ++.|-++.. +.+-..+|.+
T Consensus 324 ~lmDDaNvPSLLslPylGf~~~-dDpiY-qNTrk~IlS~~NPyY~~G~~~~GiG~PH~~~~~~Wpmsll-~~~lTs~d~~ 400 (463)
T 3p2c_A 324 HLMDDANVPSLLAMPYLGDVNV-NDPIY-QNTRRFVWSEDNPYFFKGKAGEGIGGPHIGYDMVWPMSIM-MKAFTSQNDA 400 (463)
T ss_dssp ECCCCSSSSCSTTHHHHTSSCT-TCHHH-HHHHHHHTSTTSTTEEECSSCEEECCTTTCTTEECHHHHH-HHHHTCCCHH
T ss_pred cCCCCCCchhHHHHHHcCCCCC-CCHHH-HHHHHHHHhccCCceeccCccccCCCCCCCCCCchHHHHH-HHHhccCCHH
Confidence 11223345555544455555 56654 3444444322 21 1 124655433 2334457889
Q ss_pred HHHHHHHHHHhc
Q 012384 317 HAYRMVKRLFNL 328 (465)
Q Consensus 317 ~A~~~l~~~~~~ 328 (465)
++.++|+++++.
T Consensus 401 Ei~~~L~~l~~t 412 (463)
T 3p2c_A 401 EIKTCIKMLMDT 412 (463)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc
Confidence 999999988874
No 15
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A
Probab=96.02 E-value=0.015 Score=58.47 Aligned_cols=203 Identities=12% Similarity=0.033 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHhhHHHHHHHHHHHHHhcccCCCCeEEECC-CCCC-CCCc-------CCCCCCcc---
Q 012384 122 GAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYLETNP-STSP-EHEF-------IAPDGKLA--- 189 (465)
Q Consensus 122 ~aw~a~~~w~yy~~TgD~~fL~~~~~p~l~~~A~F~~~~l~~~~~G~y~i~p-s~sP-E~~~-------~~~~G~~~--- 189 (465)
-+......++||+.|||.+|+.+....-++.+.+-|..-..+...+.|...- +..+ |.-+ ..+.|...
T Consensus 137 L~~~l~La~~y~~~Tgd~~~f~~~w~~a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~F 216 (427)
T 3qt9_A 137 LCYPVRLIHKYWKESGDETFFNYDIKKAFNMIIDLWRVEQYHREKSDYSFQRLNCSVTDTLSHEGLGTPVTYTGMTWSGF 216 (427)
T ss_dssp HHHHHHHHHHHHHHHCCCTTCCHHHHHHHHHHHHHHHHGGGHHHHCCCCCBCSSSCGGGSCHHHHTCSCCCCCSSCCCSB
T ss_pred hHHHHHHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHhccCCCCCceEeccCCCCCccccCCCCCCCcCCCCceecCC
Confidence 4556677789999999999997766667777777665543221123343332 1122 2211 00111100
Q ss_pred ccccC------chHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHcCCCCC-Cc----cC--CCCceeecccCCCCCC
Q 012384 190 CVSYS------STMDMAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLRP-TK----IA--EDGSIMEWAQDFKDPE 256 (465)
Q Consensus 190 ~~~~n------~t~d~~~v~~~l~~~~~~a~~Lg~~~~~~~~~w~~i~~~L~p-~~----~~--~~G~l~ew~~~~~~~~ 256 (465)
...++ .+.+|.++.-.|+.+.++++.++.+ .++.++|+++++.+.. +. ++ ..|.+-.+-.++....
T Consensus 217 RPSDDa~~~~~~iPsN~~a~vaL~~~aei~~~l~~d-~~La~~~~~la~eIr~aI~k~gvv~~p~~G~iyAyEVDG~Gs~ 295 (427)
T 3qt9_A 217 RPSDDACEYGYLIPANMFAVVALRYISEIAEKVYKD-EELKEKADSLREEIDNAIEKHGKVYKEGFGEVYAYETDGMGNY 295 (427)
T ss_dssp CTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCC-HHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSSCE
T ss_pred CCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhccC-HHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccCCCc
Confidence 01222 3679999999999999999999766 7788888888777752 10 11 2244433322221110
Q ss_pred --CCccchhhhhccCCCCCCCCCCCHHHHHHHHHHHhhh-------CC-----C------CCChHHHHHHHHHHhcCChH
Q 012384 257 --VHHRHLSHLFGLFPGHTITIEKNPDLCKAAEKTLQKR-------GE-----E------GPGWSITWKTALWARLHDQE 316 (465)
Q Consensus 257 --~~hrh~s~L~~l~P~~~i~~~~~p~l~~aa~~tl~~r-------~~-----~------~~gws~~~~a~~aArlgd~e 316 (465)
.+.-..+.|+.+.-++-++. +||-.. .-++.+..+ |. + ++.|-++.. +.+...+|.+
T Consensus 296 ~lMDDaNvPSLLslPylGf~~~-dDpiYq-NTrk~IlS~~NPyy~~G~~~~GIG~PH~~~~~~Wpmsl~-~~~lTs~d~~ 372 (427)
T 3qt9_A 296 NFMDDANVPSLLSIPYLEYKGI-EDEVYQ-NTRKFILSKNNRFFFEGKAAKGIGSPHTPDQYIWHIALS-MQGLTTNNQE 372 (427)
T ss_dssp ECCCCSSSSCSTTHHHHTSSCT-TCHHHH-HHHHHHTSTTSTTEEECSSCEEECCTTSCTTEEEHHHHH-HHHHTCCCHH
T ss_pred cccCCCCchhHHHHHHcCCCCC-CCHHHH-HHHHHHhcccCCceeccCccCcCCCCCCCCCCchHHHHH-HHHhhcCCHH
Confidence 01122334544433445555 566543 333444221 21 1 134655433 3444457899
Q ss_pred HHHHHHHHHHhc
Q 012384 317 HAYRMVKRLFNL 328 (465)
Q Consensus 317 ~A~~~l~~~~~~ 328 (465)
++.++|+.+++.
T Consensus 373 Ei~~~L~~l~~t 384 (427)
T 3qt9_A 373 EIDQLIKLLKET 384 (427)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc
Confidence 999999998874
No 16
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=96.01 E-value=0.027 Score=59.94 Aligned_cols=141 Identities=14% Similarity=0.074 Sum_probs=90.8
Q ss_pred CCCCccccHHHHHHHHHHHHhHHHHHHHhcCCCceEEcc------ccCCCCCCCCCCCCcccccCccC------HHHHHH
Q 012384 60 PCNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWVIHH------KTDIWAKSSADRGKVVWALWPMG------GAWLCT 127 (465)
Q Consensus 60 ~~n~~e~~~~l~~~~~~~l~~~r~~A~~~yG~~G~~~p~------~~~~~g~~~~~~~~~~~~~~~~~------~aw~a~ 127 (465)
..++.+.++.+++|+.+. ..-+.+|+.+|-.... .....|.. ....|.--+.. .+.+.+
T Consensus 68 ~~G~~~~a~~~~~~l~~~-----~~lQ~~y~~~G~~~~~~~l~E~~~~ldG~~----~~~~w~~~Q~D~~glr~~~~~~~ 138 (599)
T 2vn4_A 68 ETYDAGLQRRIEQYITAQ-----VTLQGLSNPSGSLADGSGLGEPKFELTLKP----FTGNWGRPQRDGPALRAIALIGY 138 (599)
T ss_dssp HSBCHHHHHHHHHHHHHH-----HHHHHCCBTTBCSTTSGGGGCCEECTTSCB----CCSCCSCCCTHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHhcc-----cceeeeeCCCCCcccccCcCceEEecCCcc----ccCcCCCeeccccchhHHHHHHH
Confidence 677889999999999761 2234457888763200 00111111 01123211111 234455
Q ss_pred HHHHHHHhcCCHHHHHHhhHHHHHHHHHHHHHhcccCCCCeEEECCCCCC-CCCcCCCCCCccccccCchHHHHHHHHHH
Q 012384 128 HLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYLETNPSTSP-EHEFIAPDGKLACVSYSSTMDMAIIREVF 206 (465)
Q Consensus 128 ~~w~yy~~TgD~~fL~~~~~p~l~~~A~F~~~~l~~~~~G~y~i~ps~sP-E~~~~~~~G~~~~~~~n~t~d~~~v~~~l 206 (465)
..| |..+++.+++++..+|+++..++|...+-.. |+.+. |... | -.+||.++++..|
T Consensus 139 ~~~--~~~~g~~~~~~~~~w~~v~~~l~~v~~~w~~---------~d~dlWEer~----g-------~~~~T~~~~~~aL 196 (599)
T 2vn4_A 139 SKW--LINNNYQSTVSNVIWPIVRNDLNYVAQYWNQ---------TGFDLWEEVN----G-------SSFFTVANQHRAL 196 (599)
T ss_dssp HHH--HHHTTCHHHHHHHTHHHHHHHHHHHHHHTTS---------CEECTTSCCE----E-------EEHHHHHHHHHHH
T ss_pred HHH--HHHhCCcccccHHHHHHHHHHHHHHHHhCCC---------CCCCeeeecC----C-------cchHHHHHHHHHH
Confidence 544 7889999999877999999999998887432 33455 6652 1 1799999999999
Q ss_pred HHHHHHHHHhCCCcHHHHHHHHHHcCCCC
Q 012384 207 SAIISAAEVLEKNEDALVEKVLKSLPRLR 235 (465)
Q Consensus 207 ~~~~~~a~~Lg~~~~~~~~~w~~i~~~L~ 235 (465)
..++++|+.+|.+ .++|++.+++|.
T Consensus 197 ~~aa~lA~~~g~~----~~~w~~~ad~i~ 221 (599)
T 2vn4_A 197 VEGATLAATLGQS----GSAYSSVAPQVL 221 (599)
T ss_dssp HHHHHHHHHHTCC----CHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCC----HHHHHHHHHHHH
Confidence 9999999999975 345665555554
No 17
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*
Probab=95.58 E-value=0.018 Score=59.48 Aligned_cols=87 Identities=14% Similarity=0.129 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHhhHHHHHHHHHHHHHhcccCCCCeEEECCCCCC-CCCcCCCCCCccccccCchHHHHH
Q 012384 123 AWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYLETNPSTSP-EHEFIAPDGKLACVSYSSTMDMAI 201 (465)
Q Consensus 123 aw~a~~~w~yy~~TgD~~fL~~~~~p~l~~~A~F~~~~l~~~~~G~y~i~ps~sP-E~~~~~~~G~~~~~~~n~t~d~~~ 201 (465)
+.+.+..| +..+++.+++++..+|+++..++|...+-.. |+.+. |... | -.+||.++
T Consensus 133 ~~~~~~~~--l~~~g~~~~~~~~~w~~i~~~l~~v~~~w~~---------pd~dlWEer~----g-------~~~~T~~~ 190 (472)
T 1gai_A 133 AMIGFGQW--LLDNGYTSAATEIVWPLVRNDLSYVAQYWNQ---------TGYDLWEEVN----G-------SSFFTIAV 190 (472)
T ss_dssp HHHHHHHH--HHHTTCHHHHHHTHHHHHHHHHHHHHHHTTS---------CEECTTSCCE----E-------EEHHHHHH
T ss_pred HHHHHHHH--HHHcCCccccchhHHHHHHHHHHHHHHhcCC---------CCCCCCcccC----C-------CCHHHHHH
Confidence 34555554 7889999999878999999999998887432 34455 6652 1 17999999
Q ss_pred HHHHHHHHHHHHHHhCCCcHHHHHHHHHHcCCCC
Q 012384 202 IREVFSAIISAAEVLEKNEDALVEKVLKSLPRLR 235 (465)
Q Consensus 202 v~~~l~~~~~~a~~Lg~~~~~~~~~w~~i~~~L~ 235 (465)
++..|..++++++.+|.+ .++|++.++++.
T Consensus 191 ~~~AL~~aa~lA~~~g~~----~~~w~~~ad~I~ 220 (472)
T 1gai_A 191 QHRALVEGSAFATAVGSS----CSWCDSQAPQIL 220 (472)
T ss_dssp HHHHHHHHHHHHHHTTCC----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCc----HHHHHHHHHHHH
Confidence 999999999999999865 345655554443
No 18
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*
Probab=95.43 E-value=0.072 Score=53.52 Aligned_cols=202 Identities=8% Similarity=0.009 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHhhHHHHHHHHHHHHHhcccCCCCeEEEC-CCCCC-CCCc-------CCCCCCcc---
Q 012384 122 GAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYLETN-PSTSP-EHEF-------IAPDGKLA--- 189 (465)
Q Consensus 122 ~aw~a~~~w~yy~~TgD~~fL~~~~~p~l~~~A~F~~~~l~~~~~G~y~i~-ps~sP-E~~~-------~~~~G~~~--- 189 (465)
-+......++||+.|||.+|+.+....-++.+.+-|..-..+. .+.|... .+..+ |.-+ ..+.|...
T Consensus 136 L~~~l~La~~y~~~Tgd~~~f~~~w~~a~~~il~~~~~eq~~~-~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~F 214 (426)
T 3qry_B 136 LCYPLQLAYLLWKETGETSQFDEIFVAATKEILHLWTVEQDHK-NSPYRFVRDTDRKEDTLVNDGFGPDFAVTGMTWSAF 214 (426)
T ss_dssp HHHHHHHHHHHHHHHCCCTTCSHHHHHHHHHHHHHHHHTTSGG-GCCCCCEECCSCGGGSCHHHHTCSCCCCCSSCCCSB
T ss_pred hHHHHHHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHhccC-CCCceeeecCCCCCccccCCCCCCCcCCCCceecCC
Confidence 4555667789999999999998766667777777665522121 2333322 12222 2211 01111100
Q ss_pred ccccC------chHHHHHHHHHHHHHHHHHHHh--CCCcHHHHHHHHHHcCCCCC-C------ccCCCCceeecccCCCC
Q 012384 190 CVSYS------STMDMAIIREVFSAIISAAEVL--EKNEDALVEKVLKSLPRLRP-T------KIAEDGSIMEWAQDFKD 254 (465)
Q Consensus 190 ~~~~n------~t~d~~~v~~~l~~~~~~a~~L--g~~~~~~~~~w~~i~~~L~p-~------~~~~~G~l~ew~~~~~~ 254 (465)
...++ .+..|+++.-.|+.+.++++.| ..+ .++.++|+++++.+.. + .-...|.+-.+-.++..
T Consensus 215 RPSDDa~~~~~~iPsN~~~~v~L~~~aei~~~~~v~~d-~~la~~~~~la~eIr~~I~k~gvv~h~~~g~iyAyEVDG~G 293 (426)
T 3qry_B 215 RPSDDCCQYSYLIPSNMFAVVVLGYVQEIFAALNLADS-QSVIADAKRLQDEIQEGIKNYAYTTNSKGEKIYAFEVDGLG 293 (426)
T ss_dssp CTTSSBCSSSEEHHHHHHHHHHHHHHHHHHHHHTCTTH-HHHHHHHHHHHHHHHHHHHHHSEEECTTCCEEECSEECSSS
T ss_pred CCCCcccccCCCcHHHHHHHHHHHHHHHHHHhccccCc-HHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccCC
Confidence 01222 3578999999999999999853 224 6678888877777652 1 11123444433223221
Q ss_pred CC--CCccchhhhhccCCCCCCCCCCCHHHHHHHHHHHhhh-------CC-----C--CC----ChHHHHHHHHHHhcCC
Q 012384 255 PE--VHHRHLSHLFGLFPGHTITIEKNPDLCKAAEKTLQKR-------GE-----E--GP----GWSITWKTALWARLHD 314 (465)
Q Consensus 255 ~~--~~hrh~s~L~~l~P~~~i~~~~~p~l~~aa~~tl~~r-------~~-----~--~~----gws~~~~a~~aArlgd 314 (465)
.. .+.-..+.|+.+.-++-++. +||-.. .-++.+..+ |. + +. .|-++.. +.+.-.+|
T Consensus 294 s~~lmDDaNvPSLLslPylGf~~~-dDpiYq-NTrk~IlS~~NPyy~~G~~~~GiG~PH~~~~~~Wpmsl~-~~~lTs~d 370 (426)
T 3qry_B 294 NASIMDDPNVPSLLAAPYLGYCSV-DDEVYQ-ATRRTILSSENPYFYQGEYASGLGSSHTFYRYIWPIALS-IQGLTTRD 370 (426)
T ss_dssp CBCCCCCSSSSCSTTTTTTTSSCT-TCHHHH-HHHHHHTSTTSTTEEECSSCEEECCTTSCTTEECHHHHH-HHHHTCSC
T ss_pred CccccCCCCchhHHHHHHcCCCCC-CCHHHH-HHHHHHhcccCCceeccCccCcCCCCCCCCCCchHHHHH-HHHHhCCC
Confidence 10 12223445666654566665 577543 333444221 21 1 22 3554332 12222368
Q ss_pred hHHHHHHHHHHHhc
Q 012384 315 QEHAYRMVKRLFNL 328 (465)
Q Consensus 315 ~e~A~~~l~~~~~~ 328 (465)
.+++.++|+.+++.
T Consensus 371 ~~Ei~~~L~~l~~t 384 (426)
T 3qry_B 371 KAEKKFLLDQLVAC 384 (426)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 89999999888873
No 19
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=94.59 E-value=0.33 Score=50.85 Aligned_cols=167 Identities=11% Similarity=0.146 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHcCCCC-CC----ccCCCCceeecccCCCCCCCCccchhhhhccCCCCC
Q 012384 199 MAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLR-PT----KIAEDGSIMEWAQDFKDPEVHHRHLSHLFGLFPGHT 273 (465)
Q Consensus 199 ~~~v~~~l~~~~~~a~~Lg~~~~~~~~~w~~i~~~L~-p~----~~~~~G~l~ew~~~~~~~~~~hrh~s~L~~l~P~~~ 273 (465)
|+++...+..+.++++.||.+ +..++|++.+++|. -+ -.++.|.+...... ......+.-.+.++++|= +.
T Consensus 308 nA~ly~a~~~la~lA~~lG~~--~~a~~~~~~A~~lk~ai~~~fWdee~G~y~D~~~~-~~~~~~~~~~s~~~PL~~-gi 383 (535)
T 2jg0_A 308 NSLMFKMEKILARASKAAGDN--AMANQYETLANARQKGIEKYLWNDQQGWYADYDLK-SHKVRNQLTAAALFPLYV-NA 383 (535)
T ss_dssp HHHHHHHHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHHHHHHSEETTTTEECCEETT-TTEECCCCBGGGGHHHHT-TC
T ss_pred HHHHHHHHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHhCcCCCCCEEEEEeCC-CCCEeeeehhhhHHHHhc-CC
Confidence 889999999999999999964 45677877777665 22 12234544322111 000112333444444441 32
Q ss_pred CCCCCCHHHHHHHHHHHhhh--------CC--------CCC-ChHHHHH--HHHHHhcCChHHHHHHHHHHHhccCCccc
Q 012384 274 ITIEKNPDLCKAAEKTLQKR--------GE--------EGP-GWSITWK--TALWARLHDQEHAYRMVKRLFNLVDPEHE 334 (465)
Q Consensus 274 i~~~~~p~l~~aa~~tl~~r--------~~--------~~~-gws~~~~--a~~aArlgd~e~A~~~l~~~~~~~~~~~~ 334 (465)
+ +++..+.+.+.+... +. .++ +|..... +.-..+.|..+.|.++..+.+..+...
T Consensus 384 ~----~~e~a~~v~~~l~~~l~t~~GlrT~s~~s~~yW~GpNvW~~~~~l~i~gL~~yG~~~~A~~la~~~l~~~~~~-- 457 (535)
T 2jg0_A 384 A----AKDRANKMATATKTHLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQKEVAMDISWHFLTNVQHT-- 457 (535)
T ss_dssp S----CHHHHHHHHHHHHHHTEETTEECSBSCCCSSSSSTTEECHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH--
T ss_pred C----CHHHHHHHHHHHHHHhccCCCCCCCcCCCccccCCCCcchhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH--
Confidence 3 344444444444321 10 123 6754322 223466799999988776666532110
Q ss_pred ccCCCCcccccccCC--------CCcccCccchhHHHHHHHHhhccCCeE
Q 012384 335 KHFEGGLYSNLFAAH--------PPFQIDANFGFTAAVAEMLVQSTLNDL 376 (465)
Q Consensus 335 ~~~~~g~~~nl~~~h--------~pfqidg~~g~~~av~emLlqs~~g~i 376 (465)
.. ..|.++-.++.. .++-.--.+|-++|+.-+|++.....+
T Consensus 458 ~~-~~G~l~E~yd~~~~~~~G~ggeY~~~~~fgWT~av~l~ll~~y~~~~ 506 (535)
T 2jg0_A 458 YD-REKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPKE 506 (535)
T ss_dssp HH-HHSSCBSCEETTSSSCBCCCSSSCCCBSCHHHHHHHHHHHHHHSCSS
T ss_pred hc-cCCeeeeeECCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhc
Confidence 00 012222211111 011111357888888877777665543
No 20
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*
Probab=91.21 E-value=1.6 Score=47.02 Aligned_cols=128 Identities=15% Similarity=0.068 Sum_probs=77.4
Q ss_pred ccCCCCccccHHHHHHHHHHHHhHHHHHHHhcCCCceEEccccCCCCCCCCCCCCcccccCcc-CHHHHHHHHHHHHHhc
Q 012384 58 SLPCNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADRGKVVWALWPM-GGAWLCTHLWEHYNYT 136 (465)
Q Consensus 58 ~~~~n~~e~~~~l~~~~~~~l~~~r~~A~~~yG~~G~~~p~~~~~~g~~~~~~~~~~~~~~~~-~~aw~a~~~w~yy~~T 136 (465)
+...+.+|.++..++|+.+... .+|.+ ++...+.|. +.|...+. ..+..+..+|.+. -+
T Consensus 352 l~~~G~~~~a~~~l~~l~~~q~-----------~~G~~-~~~~~~~G~-------p~w~~~Q~D~~g~~l~~~~~~~-~~ 411 (684)
T 1lf6_A 352 FIAAGDVDSANRSLDYLAKVVK-----------DNGMI-PQNTWISGK-------PYWTGIQLDEQADPIILSYRLK-RY 411 (684)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHH-----------HHSSC-CSCBCTTSC-------BCCCCCCHHHHHHHHHHHHHTT-CG
T ss_pred HHHcCCHHHHHHHHHHHHhhcC-----------CCCCc-ccceeCCCC-------cccCCccccchHHHHHHHHHHH-Hc
Confidence 3446789999999998866531 12322 121112221 22322111 1334444455333 33
Q ss_pred CCHHHHHHhhHHH-HHHHHHHHHHhcccCCCCeEEECCCCCC-CCCcCCCCCCccccccCchHHHHHHHHHHHHHHHHHH
Q 012384 137 MDRDFLEKRAYPL-LEGCASFLLDWLIEGHDGYLETNPSTSP-EHEFIAPDGKLACVSYSSTMDMAIIREVFSAIISAAE 214 (465)
Q Consensus 137 gD~~fL~~~~~p~-l~~~A~F~~~~l~~~~~G~y~i~ps~sP-E~~~~~~~G~~~~~~~n~t~d~~~v~~~l~~~~~~a~ 214 (465)
+ .||+ ++.+++|...+-. .|..+- |... | -+.|+.++++..|..++++|+
T Consensus 412 g--------~~~~~v~~al~~i~~~~~---------~~~~g~WE~~~----g-------~~~~t~~~~~~aL~~~a~lA~ 463 (684)
T 1lf6_A 412 D--------LYDSLVKPLADFIIKIGP---------KTGQERWEEIG----G-------YSPATMAAEVAGLTCAAYIAE 463 (684)
T ss_dssp G--------GTTTTHHHHHHHHHHHCS---------SBSSCTTSSCC----B-------BCHHHHHHHHHHHHHHHHHHH
T ss_pred C--------chHHHHHHHHHHHHHhCC---------CCCcccccccC----C-------cCHHHHHHHHHHHHHHHHHHH
Confidence 3 7898 9999999888631 122222 3321 1 257999999999999999999
Q ss_pred HhCCCcHHHHHHHHHHcCCCC
Q 012384 215 VLEKNEDALVEKVLKSLPRLR 235 (465)
Q Consensus 215 ~Lg~~~~~~~~~w~~i~~~L~ 235 (465)
.+|.+ +..++|++.+++|.
T Consensus 464 ~~g~~--~~a~~~~~~a~~i~ 482 (684)
T 1lf6_A 464 QNKDY--ESAQKYQEKADNWQ 482 (684)
T ss_dssp HTTCH--HHHHHHHHHHHHHH
T ss_pred HcCCh--HHHHHHHHHHHHHH
Confidence 99854 56778888877776
No 21
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=86.22 E-value=1.7 Score=43.31 Aligned_cols=40 Identities=25% Similarity=0.365 Sum_probs=34.0
Q ss_pred cCccCHHHHHHHHHHHHHhcCCHHHHHHhhHHHHHHHHHHHHHhc
Q 012384 117 LWPMGGAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWL 161 (465)
Q Consensus 117 ~~~~~~aw~a~~~w~yy~~TgD~~fL~~~~~p~l~~~A~F~~~~l 161 (465)
.|.-|.||+++.+-+-|++|+|++||+ .-+++++|+.+.+
T Consensus 218 ~WaRGqAw~i~gl~~ly~~T~d~~yL~-----~A~~la~~~l~~~ 257 (377)
T 2ahf_A 218 TWTRGQAWGIYGFALNSRYLGNADLLE-----TAKRMARHFLARV 257 (377)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTCHHHHH-----HHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHHHHHHHCChHHHH-----HHHHHHHHHHHhh
Confidence 455678999999999999999999995 3467889998887
No 22
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=83.16 E-value=1.2 Score=44.63 Aligned_cols=41 Identities=22% Similarity=0.336 Sum_probs=35.0
Q ss_pred cCccCHHHHHHHHHHHHHhcCCHHHHHHhhHHHHHHHHHHHHHhcc
Q 012384 117 LWPMGGAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLI 162 (465)
Q Consensus 117 ~~~~~~aw~a~~~w~yy~~TgD~~fL~~~~~p~l~~~A~F~~~~l~ 162 (465)
.|.-|.||+++.+-+.|++|+|++||+ .+ +++++|+.+.+.
T Consensus 243 ~WaRGqAw~i~gl~~lY~~T~d~~yL~-~A----~~la~~~l~~~~ 283 (397)
T 2zzr_A 243 SWARGQAWGIYGIPLSYRKMKDYQQII-LF----KGMTNYFLNRLP 283 (397)
T ss_dssp CBHHHHHHHHHHHHHHHHHHCCHHHHH-HH----HHHHHHHHHTCC
T ss_pred hhHHHHHHHHHHHHHHHHHHCCHHHHH-HH----HHHHHHHHHhhH
Confidence 455678999999999999999999995 34 888999999873
No 23
>3p6b_A Cellulose 1,4-beta-cellobiosidase; beta-sandwich, carbohydrate binding, sugar binding protein; 2.00A {Clostridium thermocellum}
Probab=43.96 E-value=53 Score=29.37 Aligned_cols=43 Identities=12% Similarity=0.167 Sum_probs=28.6
Q ss_pred CCeEEEEEEEeCCCCCcccceeeeecCCeEEEEEccCCcEEEEeecccccc
Q 012384 409 DGDLHEVGIYSNYSNNDHDSFKTLHYRGTSVKVNLSAGKIYTFNRQLKCTN 459 (465)
Q Consensus 409 ~g~~~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~~~~~~~~ 459 (465)
+|++ .|.|.......-. ++.-+ -.|.+++|++|+|....++.+
T Consensus 74 ~g~l-~v~I~~~G~~~W~---vQl~q----~gi~L~~G~tY~lSFdAkA~~ 116 (205)
T 3p6b_A 74 NKAF-RLTVIDKGQNKWS---VQMRH----RGITLEQGHTYTVRFTIWSDK 116 (205)
T ss_dssp CEEE-EEEEEEECSSGGG---EEEEE----EEEEECTTCEEEEEEEEEESS
T ss_pred CCEE-EEEECCCCCCcee---EEEEE----CCEEecCCCEEEEEEEEEeCC
Confidence 6664 7777765544444 23222 368999999999998776554
No 24
>2khf_A PLNJ; anti-microbial, bacteriocin, peptide, two-peptide, antimicrobial protein; NMR {Lactobacillus plantarum} PDB: 2khg_A
Probab=42.43 E-value=4.7 Score=22.62 Aligned_cols=7 Identities=71% Similarity=1.644 Sum_probs=5.5
Q ss_pred c-hhhccc
Q 012384 7 W-SFYSSL 13 (465)
Q Consensus 7 w-~~~~~~ 13 (465)
| ||||+.
T Consensus 3 wknfwssl 10 (26)
T 2khf_A 3 WKNFWSSL 10 (26)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 7 999865
No 25
>3r07_C Putative lipoate-protein ligase A subunit 2; adenylate-forming enzyme, BI-partite, ATP-binding, transferase; 2.70A {Thermoplasma acidophilum dsm 1728}
Probab=31.75 E-value=50 Score=25.37 Aligned_cols=26 Identities=19% Similarity=0.350 Sum_probs=20.5
Q ss_pred eeeecc-eEEEEEEeCCeEEEEEEEeC
Q 012384 395 LKARGG-ETVSICWKDGDLHEVGIYSN 420 (465)
Q Consensus 395 L~arG~-~~V~~~~~~g~~~~~~i~s~ 420 (465)
.|.+|| ..|++..++|++++++|..+
T Consensus 12 ~kf~~G~v~v~l~v~~G~I~~vki~GD 38 (91)
T 3r07_C 12 WKAKKGLIRVTLDLDGNRIKDIHISGD 38 (91)
T ss_dssp EECSSCEEEEEEEEETTEEEEEEEEEE
T ss_pred EEcCCcEEEEEEEEcCCEEEEEEEEcc
Confidence 466777 56677778999999999975
No 26
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=30.53 E-value=49 Score=27.14 Aligned_cols=52 Identities=23% Similarity=0.375 Sum_probs=37.5
Q ss_pred ceeeecceEEEEEEeCCeEEEEEEEeCCCCCcccceeeeecCCeEEEEEccCCcEEEEeecccccc
Q 012384 394 GLKARGGETVSICWKDGDLHEVGIYSNYSNNDHDSFKTLHYRGTSVKVNLSAGKIYTFNRQLKCTN 459 (465)
Q Consensus 394 gL~arG~~~V~~~~~~g~~~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~~~~~~~~ 459 (465)
|=...|. .|.+.|.+|++-.+.+.+. . .. ..+++..+.|..+++++..++++
T Consensus 63 GpP~~G~-~V~V~W~DG~~y~a~f~g~-----~---~~-----~~YtV~FeDgs~~~~kR~~iyt~ 114 (123)
T 2xdp_A 63 GPPAEGE-VVQVKWPDGKLYGAKYFGS-----N---IA-----HMYQVEFEDGSQIAMKREDIYTL 114 (123)
T ss_dssp CCCCTTC-EEEEECTTSCEEEEEEEEE-----E---EE-----EEEEEECTTSCEEEEEGGGCCCS
T ss_pred CCCCCCC-EEEEEcCCCCEEeEEEeee-----e---eE-----EEEEEEECCCCeEEecHHHcccc
Confidence 4445554 6899999999877777651 1 11 24789999999999999777654
No 27
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=29.65 E-value=45 Score=32.43 Aligned_cols=38 Identities=13% Similarity=0.026 Sum_probs=30.0
Q ss_pred CccCHHHHHHHHHHHHHhcCCHHHHHHhhHHHHHHHHHH
Q 012384 118 WPMGGAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASF 156 (465)
Q Consensus 118 ~~~~~aw~a~~~w~yy~~TgD~~fL~~~~~p~l~~~A~F 156 (465)
|..+.+++...+-+.|++|+|+.||+ ++-.++..+.+.
T Consensus 211 ~tYnqg~~l~g~~~LY~~T~d~~yl~-~a~~l~~~~~~~ 248 (349)
T 3k7x_A 211 FTYNQGVYIGANLELYRITKEAIYLD-TANKTAAISLKE 248 (349)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHH
T ss_pred eeHHHHHHHHHHHHHHHhhCcHHHHH-HHHHHHHHHHHH
Confidence 45567899999999999999999996 576666665543
No 28
>3k4z_A Glycoside hydrolase family 9; cellulase, CBHA, CBM4, IG-like, cellulosome, CBM, sugar binding protein; HET: CBI XGP; 2.11A {Clostridium thermocellum dsm 4150}
Probab=28.09 E-value=1.3e+02 Score=28.34 Aligned_cols=43 Identities=12% Similarity=0.161 Sum_probs=28.5
Q ss_pred CCeEEEEEEEeCCCCCcccceeeeecCCeEEEEEccCCcEEEEeecccccc
Q 012384 409 DGDLHEVGIYSNYSNNDHDSFKTLHYRGTSVKVNLSAGKIYTFNRQLKCTN 459 (465)
Q Consensus 409 ~g~~~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~~~~~~~~ 459 (465)
+|++ .+.|......+-. +++.+ -.|.+++|++|+|+...++.+
T Consensus 53 ~g~l-~i~i~~~G~n~W~---vQl~q----~gi~L~~G~tY~lSF~akAs~ 95 (289)
T 3k4z_A 53 NKAF-AVTVLDKGQNRWS---VQMRH----RGLTLEQGHTYRVRLKIWADA 95 (289)
T ss_dssp CEEE-EEEEEEECSSGGG---EEEEE----EEEEECTTCEEEEEEEEEESS
T ss_pred CCEE-EEEeCCCCCCCee---EEEEE----CCEEecCCCEEEEEEEEEeCC
Confidence 6664 6777765545444 33322 468899999999998776654
No 29
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=26.49 E-value=96 Score=30.65 Aligned_cols=42 Identities=7% Similarity=-0.073 Sum_probs=30.6
Q ss_pred CHHHHHHHHHHHHHhcCCHHHHHHhhHHHHHHHHHHHHHhcccCCCCe
Q 012384 121 GGAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGY 168 (465)
Q Consensus 121 ~~aw~a~~~w~yy~~TgD~~fL~~~~~p~l~~~A~F~~~~l~~~~~G~ 168 (465)
..|+++..+-+ |+.|+|..++ .+++++.++....+...++|-
T Consensus 112 d~Af~i~al~~-~~~tg~~~~l-----~~a~~~~~~l~~~~~d~~~Gg 153 (421)
T 2zbl_A 112 QHFFALLGAAS-AVTTGHPEAR-----KLLDYTIEVIEKYFWSEEEQM 153 (421)
T ss_dssp HHHHHHHHHHH-HHTTTCTTHH-----HHHHHHHHHHHHHTEETTTTE
T ss_pred HHHHHHHHHHH-HHHhCCccHH-----HHHHHHHHHHHHHhccCCCCC
Confidence 35788888888 8999999776 356678888888765433453
No 30
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=24.51 E-value=63 Score=26.25 Aligned_cols=51 Identities=22% Similarity=0.335 Sum_probs=35.7
Q ss_pred eeeecceEEEEEEeCCeEEEEEEEeCCCCCcccceeeeecCCeEEEEEccCCcEEEEeecccccc
Q 012384 395 LKARGGETVSICWKDGDLHEVGIYSNYSNNDHDSFKTLHYRGTSVKVNLSAGKIYTFNRQLKCTN 459 (465)
Q Consensus 395 L~arG~~~V~~~~~~g~~~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~~~~~~~~ 459 (465)
=-..|. .|.+.|.+|++-.++..+. . .. ..+++.++.|..+++++..+.++
T Consensus 63 pP~~G~-~V~V~W~DG~~y~a~f~g~-----~---~~-----~~Y~V~feDgs~~~~kR~~iyt~ 113 (118)
T 2qqr_A 63 PPAEGE-VVQVRWTDGQVYGAKFVAS-----H---PI-----QMYQVEFEDGSQLVVKRDDVYTL 113 (118)
T ss_dssp CCCTTC-EEEEECTTSCEEEEEEEEE-----E---EE-----EEEEEEETTSCEEEECGGGEEET
T ss_pred CCCCCC-EEEEEcCCCCEeeeEEece-----e---EE-----EEEEEEECCCCEEEEcHHHeecc
Confidence 344444 6889999999877776641 1 11 24788899999999988766553
No 31
>1gu3_A Endoglucanase C; carbohydrate-binding module, carbohydrate binding module, CBM, cellulose; HET: BGC; 2.3A {Cellulomonas fimi} SCOP: b.18.1.14 PDB: 1ulo_A 1ulp_A
Probab=20.73 E-value=89 Score=26.25 Aligned_cols=44 Identities=18% Similarity=0.144 Sum_probs=26.9
Q ss_pred eCCeEEEEEEEeCCCCCcccceeeeecCCeEEEEEccCCcEEEEeeccccccc
Q 012384 408 KDGDLHEVGIYSNYSNNDHDSFKTLHYRGTSVKVNLSAGKIYTFNRQLKCTNL 460 (465)
Q Consensus 408 ~~g~~~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i~~~~~~~~~ 460 (465)
++|++ .|.|.. ....-. +++. .-.|++++|++|+|+..+++...
T Consensus 28 ~~g~l-~i~i~~-G~~~w~---vql~----q~gi~L~~G~tY~lsF~A~as~~ 71 (149)
T 1gu3_A 28 STGAL-CVAVPA-GSAQYG---VGVV----LNGVAIEEGTTYTLRYTATASTD 71 (149)
T ss_dssp TTSSE-EEEECT-TCCTTS---SEEE----EEEECBCTTCEEEEEEEEEESSC
T ss_pred eCCEE-EEEECC-CCcCEE---EEEE----eCCEEEcCCCEEEEEEEEEeCCC
Confidence 57774 566666 223323 2222 23588999999999987665543
Done!