BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012389
(464 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UGF|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis
pdb|3UGF|B Chain B, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis
pdb|3UGG|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 1-Kestose
pdb|3UGG|B Chain B, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 1-Kestose
pdb|3UGH|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 6-Kestose
pdb|3UGH|B Chain B, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 6-Kestose
Length = 546
Score = 591 bits (1524), Expect = e-169, Method: Compositional matrix adjust.
Identities = 283/465 (60%), Positives = 356/465 (76%), Gaps = 6/465 (1%)
Query: 1 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYP 60
+ DQWYD+ GV++GSAT LPDG+I+MLYTG T + V++ +LAYPAD SDPLL++WVKYP
Sbjct: 80 LAADQWYDMQGVFSGSATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKYP 139
Query: 61 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDE 120
GNP+L P + P +FRD +T W +G WR+ IG+K TGI++VY+T DFK+++LL+E
Sbjct: 140 GNPILSAPPGVSPTEFRDASTGWYVSNGTWRIAIGAKYNTTGIAMVYETKDFKSFKLLEE 199
Query: 121 YLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPA 180
LHAVP TG+WECVD YPV+ G GL+TS GP +KHVLKAS+D+ + D+YAIGTY+
Sbjct: 200 LLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQQRDYYAIGTYDLG 259
Query: 181 NDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWAS 240
+KWTPDNPEEDVGIGL++D+G+YYASK+FYDP K+RR+VW W E D+E D EKGWA+
Sbjct: 260 TNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDSEVADREKGWAN 319
Query: 241 VQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTXXXXXXXXXXXXXPLDIGVATQLDIS 300
VQTIPRTVL D KTG+NV+ WPVEE+ESLR +S PLD+G ATQLDI
Sbjct: 320 VQTIPRTVLLDQKTGTNVLLWPVEEVESLRLSSKEFSKVKAGAGSVVPLDVGTATQLDII 379
Query: 301 AEFETE---LLGSGAMEEGYGC--SGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNT 355
AEFE + L G+ + GY C SGGA +R +GPFGLLV+A ++LSE TP++F +
Sbjct: 380 AEFEIDKEALEGTIEADMGYNCTTSGGAAERGVLGPFGLLVSATENLSEQTPVYFYIAKG 439
Query: 356 TKGT-NTYFCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIVESFGQGGRTV 414
T G T+FC DE+RSS A DV KQV G VPVL GEK +MR+LVDHSIVESF QGGR+
Sbjct: 440 TDGNFKTFFCLDESRSSKASDVSKQVKGFTVPVLDGEKFTMRLLVDHSIVESFAQGGRSC 499
Query: 415 ITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHPF 459
ITSR+YPT+AIYGAA+LFLFNNATG ++ A+LKIW +NSAFI PF
Sbjct: 500 ITSRVYPTEAIYGAAKLFLFNNATGASITASLKIWEMNSAFIQPF 544
>pdb|2XQR|A Chain A, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|C Chain C, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|E Chain E, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|G Chain G, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|I Chain I, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|K Chain K, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
Length = 537
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/472 (44%), Positives = 284/472 (60%), Gaps = 17/472 (3%)
Query: 1 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYP 60
+ P +DING W+GSATILP+G+ V+LYTG K+ QVQN+A P + SDP L +W K P
Sbjct: 66 IFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSP 125
Query: 61 GNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELL 118
NP++ P I FRDPTTAW G D KWR+ IGSKI + G+++ Y + DF +E
Sbjct: 126 LNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKS 185
Query: 119 DEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPG---IKHVLKASLDDTKVDHYAIG 175
E LH G+GMWEC DF+PV GS G++TS+ G +KHVLK SLDDTK D+Y IG
Sbjct: 186 PEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIG 245
Query: 176 TYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLE 235
TY+ DK+ PDN + G ++DYG+YYASK+F+D K RRI+WGW NE+ + DD+E
Sbjct: 246 TYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVE 305
Query: 236 KGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTXXXXXXXXXXXXXPLDIGV-A 294
KGW+ +QTIPR + D ++G ++QWPV E+E LR GV A
Sbjct: 306 KGWSGIQTIPRKIWLD-RSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTA 364
Query: 295 TQLDISAEFET-ELLGSGAMEEGYG-----CSGGAID-RSAMGPFGLLVNAHDSLSELTP 347
Q D+ F+ +L + +E + CS + +S +GPFGL+V A +L E T
Sbjct: 365 AQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTS 424
Query: 348 IFFRSSNTTKGTNTY---FCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIV 404
++FR + +N Y C+D++RSSL D K +G+ V + + LS+R L+DHS+V
Sbjct: 425 VYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLRALIDHSVV 484
Query: 405 ESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNSAFI 456
ESFG GR ITSR+YP AI ++ LF FN L W +NSA I
Sbjct: 485 ESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQI 536
>pdb|2AC1|A Chain A, Crystal Structure Of A Cell-Wall Invertase From
Arabidopsis Thaliana
Length = 541
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/472 (44%), Positives = 284/472 (60%), Gaps = 17/472 (3%)
Query: 1 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYP 60
+ P +DING W+GSATILP+G+ V+LYTG K+ QVQN+A P + SDP L +W K P
Sbjct: 70 IFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSP 129
Query: 61 GNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELL 118
NP++ P I FRDPTTAW G D KWR+ IGSKI + G+++ Y + DF +E
Sbjct: 130 LNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKS 189
Query: 119 DEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPG---IKHVLKASLDDTKVDHYAIG 175
E LH G+GMWEC DF+PV GS G++TS+ G +KHVLK SLDDTK D+Y IG
Sbjct: 190 PEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIG 249
Query: 176 TYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLE 235
TY+ DK+ PDN + G ++DYG+YYASK+F+D K RRI+WGW NE+ + DD+E
Sbjct: 250 TYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVE 309
Query: 236 KGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTXXXXXXXXXXXXXPLDIGV-A 294
KGW+ +QTIPR + D ++G ++QWPV E+E LR GV A
Sbjct: 310 KGWSGIQTIPRKIWLD-RSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTA 368
Query: 295 TQLDISAEFET-ELLGSGAMEEGYG-----CSGGAID-RSAMGPFGLLVNAHDSLSELTP 347
Q D+ F+ +L + +E + CS + +S +GPFGL+V A +L E T
Sbjct: 369 AQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTS 428
Query: 348 IFFRSSNTTKGTNTY---FCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIV 404
++FR + +N Y C+D++RSSL D K +G+ V + + LS+R L+DHS+V
Sbjct: 429 VYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLRALIDHSVV 488
Query: 405 ESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNSAFI 456
ESFG GR ITSR+YP AI ++ LF FN L W +NSA I
Sbjct: 489 ESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQI 540
>pdb|2QQW|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D23a) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 537
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/472 (44%), Positives = 284/472 (60%), Gaps = 17/472 (3%)
Query: 1 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYP 60
+ P +DING W+GSATILP+G+ V+LYTG K+ QVQN+A P + SDP L +W K P
Sbjct: 66 IFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSP 125
Query: 61 GNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELL 118
NP++ P I FRDPTTAW G D KWR+ IGSKI + G+++ Y + DF +E
Sbjct: 126 LNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKS 185
Query: 119 DEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPG---IKHVLKASLDDTKVDHYAIG 175
E LH G+GMWEC DF+PV GS G++TS+ G +KHVLK SLDDTK D+Y IG
Sbjct: 186 PEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIG 245
Query: 176 TYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLE 235
TY+ DK+ PDN + G ++DYG+YYASK+F+D K RRI+WGW NE+ + DD+E
Sbjct: 246 TYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVE 305
Query: 236 KGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTXXXXXXXXXXXXXPLDIGV-A 294
KGW+ +QTIPR + D ++G ++QWPV E+E LR GV A
Sbjct: 306 KGWSGIQTIPRKIWLD-RSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTA 364
Query: 295 TQLDISAEFET-ELLGSGAMEEGYG-----CSGGAID-RSAMGPFGLLVNAHDSLSELTP 347
Q D+ F+ +L + +E + CS + +S +GPFGL+V A +L E T
Sbjct: 365 AQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTS 424
Query: 348 IFFRSSNTTKGTNTY---FCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIV 404
++FR + +N Y C+D++RSSL D K +G+ V + + LS+R L+DHS+V
Sbjct: 425 VYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLRALIDHSVV 484
Query: 405 ESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNSAFI 456
ESFG GR ITSR+YP AI ++ LF FN L W +NSA I
Sbjct: 485 ESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQI 536
>pdb|2OXB|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203q) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 537
Score = 377 bits (968), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/472 (44%), Positives = 284/472 (60%), Gaps = 17/472 (3%)
Query: 1 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYP 60
+ P +DING W+GSATILP+G+ V+LYTG K+ QVQN+A P + SDP L +W K P
Sbjct: 66 IFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSP 125
Query: 61 GNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELL 118
NP++ P I FRDPTTAW G D KWR+ IGSKI + G+++ Y + DF +E
Sbjct: 126 LNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKS 185
Query: 119 DEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPG---IKHVLKASLDDTKVDHYAIG 175
E LH G+GMW+C DF+PV GS G++TS+ G +KHVLK SLDDTK D+Y IG
Sbjct: 186 PEPLHYDDGSGMWQCPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIG 245
Query: 176 TYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLE 235
TY+ DK+ PDN + G ++DYG+YYASK+F+D K RRI+WGW NE+ + DD+E
Sbjct: 246 TYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVE 305
Query: 236 KGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTXXXXXXXXXXXXXPLDIGV-A 294
KGW+ +QTIPR + D ++G ++QWPV E+E LR GV A
Sbjct: 306 KGWSGIQTIPRKIWLD-RSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTA 364
Query: 295 TQLDISAEFET-ELLGSGAMEEGYG-----CSGGAID-RSAMGPFGLLVNAHDSLSELTP 347
Q D+ F+ +L + +E + CS + +S +GPFGL+V A +L E T
Sbjct: 365 AQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTS 424
Query: 348 IFFRSSNTTKGTNTY---FCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIV 404
++FR + +N Y C+D++RSSL D K +G+ V + + LS+R L+DHS+V
Sbjct: 425 VYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLRALIDHSVV 484
Query: 405 ESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNSAFI 456
ESFG GR ITSR+YP AI ++ LF FN L W +NSA I
Sbjct: 485 ESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQI 536
>pdb|2QQV|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203a) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 537
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/472 (44%), Positives = 283/472 (59%), Gaps = 17/472 (3%)
Query: 1 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYP 60
+ P +DING W+GSATILP+G+ V+LYTG K+ QVQN+A P + SDP L +W K P
Sbjct: 66 IFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSP 125
Query: 61 GNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELL 118
NP++ P I FRDPTTAW G D KWR+ IGSKI + G+++ Y + DF +E
Sbjct: 126 LNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKS 185
Query: 119 DEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPG---IKHVLKASLDDTKVDHYAIG 175
E LH G+GMW C DF+PV GS G++TS+ G +KHVLK SLDDTK D+Y IG
Sbjct: 186 PEPLHYDDGSGMWACPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIG 245
Query: 176 TYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLE 235
TY+ DK+ PDN + G ++DYG+YYASK+F+D K RRI+WGW NE+ + DD+E
Sbjct: 246 TYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVE 305
Query: 236 KGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTXXXXXXXXXXXXXPLDIGV-A 294
KGW+ +QTIPR + D ++G ++QWPV E+E LR GV A
Sbjct: 306 KGWSGIQTIPRKIWLD-RSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTA 364
Query: 295 TQLDISAEFET-ELLGSGAMEEGYG-----CSGGAID-RSAMGPFGLLVNAHDSLSELTP 347
Q D+ F+ +L + +E + CS + +S +GPFGL+V A +L E T
Sbjct: 365 AQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTS 424
Query: 348 IFFRSSNTTKGTNTY---FCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIV 404
++FR + +N Y C+D++RSSL D K +G+ V + + LS+R L+DHS+V
Sbjct: 425 VYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLRALIDHSVV 484
Query: 405 ESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNSAFI 456
ESFG GR ITSR+YP AI ++ LF FN L W +NSA I
Sbjct: 485 ESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQI 536
>pdb|2QQU|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D239a) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 535
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/470 (44%), Positives = 282/470 (60%), Gaps = 17/470 (3%)
Query: 1 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYP 60
+ P +DING W+GSATILP+G+ V+LYTG K+ QVQN+A P + SDP L +W K P
Sbjct: 66 IFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSP 125
Query: 61 GNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELL 118
NP++ P I FRDPTTAW G D KWR+ IGSKI + G+++ Y + DF +E
Sbjct: 126 LNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKS 185
Query: 119 DEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPG---IKHVLKASLDDTKVDHYAIG 175
E LH G+GMWEC DF+PV GS G++TS+ G +KHVLK SL DTK D+Y IG
Sbjct: 186 PEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLADTKHDYYTIG 245
Query: 176 TYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLE 235
TY+ DK+ PDN + G ++DYG+YYASK+F+D K RRI+WGW NE+ + DD+E
Sbjct: 246 TYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVE 305
Query: 236 KGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTXXXXXXXXXXXXXPLDIGV-A 294
KGW+ +QTIPR + D ++G ++QWPV E+E LR GV A
Sbjct: 306 KGWSGIQTIPRKIWLD-RSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTA 364
Query: 295 TQLDISAEFET-ELLGSGAMEEGYG-----CSGGAID-RSAMGPFGLLVNAHDSLSELTP 347
Q D+ F+ +L + +E + CS + +S +GPFGL+V A +L E T
Sbjct: 365 AQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTS 424
Query: 348 IFFRSSNTTKGTNTY---FCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIV 404
++FR + +N Y C+D++RSSL D K +G+ V + + LS+R L+DHS+V
Sbjct: 425 VYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLRALIDHSVV 484
Query: 405 ESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNSA 454
ESFG GR ITSR+YP AI ++ LF FN L W +NSA
Sbjct: 485 ESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSA 534
>pdb|1ST8|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus
pdb|2ADD|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus In Complex With Sucrose
pdb|2ADE|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus In Complex With Fructose
pdb|2AEY|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus In Complex With 2,5
Dideoxy-2,5-Immino-D-Mannitol
Length = 543
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/475 (42%), Positives = 286/475 (60%), Gaps = 19/475 (4%)
Query: 1 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYP 60
+ P Q D W+GSATILP MLYTGS KS QVQ+LA+P + SDP L +WVK+P
Sbjct: 70 IYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLREWVKHP 129
Query: 61 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDE 120
NP++ PP + FRDP+TAW GPDG WR+ +G G++ +YQ+TDF ++ D+
Sbjct: 130 KNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDFVNWKRYDQ 189
Query: 121 YLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPA 180
L + TG WEC DFYPV +N + GLDTS G ++HV+KA + D Y IGTY+P
Sbjct: 190 PLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGFEGH--DWYTIGTYSPD 247
Query: 181 NDKWTPDNPEEDVG--IGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGW 238
+ + P N G + L++DYG++YASKSF+D K RR++W W+ ETD+++DD+EKGW
Sbjct: 248 RENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQADDIEKGW 307
Query: 239 ASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTXXXXXXXXXXXXXPLDIGVATQLD 298
A +Q+ PR L+ ++ G ++QWPVEEIE LRQN + A+Q D
Sbjct: 308 AGLQSFPR-ALWIDRNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGIAASQAD 366
Query: 299 ISAEF------ETELLGSGAMEEGYGCS-GGAIDRSAMGPFGLLVNAHDSLSELTPIFFR 351
++ F E E+L + ++ C+ GA R A+GPFGLL A L E + IFFR
Sbjct: 367 VTISFKLEGLKEAEVLDTTLVDPQALCNERGASSRGALGPFGLLAMASKDLKEQSAIFFR 426
Query: 352 SSNTTKGT-NTYFCADETRSSLAPDVFKQVHGSKVPV-LQGEKLSMRILVDHSIVESFGQ 409
G + C+D +RS++ ++ +G+ V + + E++S+R L+DHSI+ESFG
Sbjct: 427 VFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGAFVDIDPRSEEISLRNLIDHSIIESFGA 486
Query: 410 GGRTVITSRIYPTKAIYGAARLFLFNNATGVNVK-ATLKIWRLNSAFIHPFPLDQ 463
GG+T ITSRIYP A LF+FNN T NVK + + W + +A F +DQ
Sbjct: 487 GGKTCITSRIYPKFVNNEEAHLFVFNNGTQ-NVKISEMSAWSMKNA---KFVVDQ 537
>pdb|2AEZ|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q)
From Cichorium Intybus In Complex With 1-Kestose
Length = 543
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/475 (42%), Positives = 286/475 (60%), Gaps = 19/475 (4%)
Query: 1 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYP 60
+ P Q D W+GSATILP MLYTGS KS QVQ+LA+P + SDP L +WVK+P
Sbjct: 70 IYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLREWVKHP 129
Query: 61 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDE 120
NP++ PP + FRDP+TAW GPDG WR+ +G G++ +YQ+TDF ++ D+
Sbjct: 130 KNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDFVNWKRYDQ 189
Query: 121 YLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPA 180
L + TG W+C DFYPV +N + GLDTS G ++HV+KA + D Y IGTY+P
Sbjct: 190 PLSSADATGTWQCPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGFEGH--DWYTIGTYSPD 247
Query: 181 NDKWTPDNPEEDVG--IGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGW 238
+ + P N G + L++DYG++YASKSF+D K RR++W W+ ETD+++DD+EKGW
Sbjct: 248 RENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQADDIEKGW 307
Query: 239 ASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTXXXXXXXXXXXXXPLDIGVATQLD 298
A +Q+ PR L+ ++ G ++QWPVEEIE LRQN + A+Q D
Sbjct: 308 AGLQSFPR-ALWIDRNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGIAASQAD 366
Query: 299 ISAEF------ETELLGSGAMEEGYGCS-GGAIDRSAMGPFGLLVNAHDSLSELTPIFFR 351
++ F E E+L + ++ C+ GA R A+GPFGLL A L E + IFFR
Sbjct: 367 VTISFKLEGLKEAEVLDTTLVDPQALCNERGASSRGALGPFGLLAMASKDLKEQSAIFFR 426
Query: 352 SSNTTKGT-NTYFCADETRSSLAPDVFKQVHGSKVPV-LQGEKLSMRILVDHSIVESFGQ 409
G + C+D +RS++ ++ +G+ V + + E++S+R L+DHSI+ESFG
Sbjct: 427 VFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGAFVDIDPRSEEISLRNLIDHSIIESFGA 486
Query: 410 GGRTVITSRIYPTKAIYGAARLFLFNNATGVNVK-ATLKIWRLNSAFIHPFPLDQ 463
GG+T ITSRIYP A LF+FNN T NVK + + W + +A F +DQ
Sbjct: 487 GGKTCITSRIYPKFVNNEEAHLFVFNNGTQ-NVKISEMSAWSMKNA---KFVVDQ 537
>pdb|3PIG|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum
pdb|3PIG|B Chain B, Beta-Fructofuranosidase From Bifidobacterium Longum
pdb|3PIJ|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum -
Complex With Fructose
pdb|3PIJ|B Chain B, Beta-Fructofuranosidase From Bifidobacterium Longum -
Complex With Fructose
Length = 526
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 172/441 (39%), Gaps = 87/441 (19%)
Query: 10 NGVWTGSATILPDGQIVMLYTG--------STDKSVQVQNLAYPADPSDPLLLDWVKYPG 61
+GV++GSA I +G + YTG +T QVQ A P D L G
Sbjct: 110 DGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALP----DNDELTSATKQG 165
Query: 62 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIG-SKIGKTGISLVYQTTDFKTYELLDE 120
+ P + +RDP W D W +T G S K G ++ + D +E
Sbjct: 166 MIIDCPTDKV-DHHYRDPKV-WKTGD-TWYMTFGVSSADKRGQMWLFSSKDMVRWEYERV 222
Query: 121 -YLHAVPGTGMWECVDFYPVAI---NGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGT 176
+ H P M EC DF P+ N + SA G + ++ + Y IGT
Sbjct: 223 LFQHPDPDVFMLECPDFSPIKDKDGNEKWVIGFSAMGSKPSGFMNRNVSNAG---YMIGT 279
Query: 177 YNPANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDTESDDLE 235
+ P + PE + + WD G YYA +SF R+IV+GW++ +
Sbjct: 280 WEPGGEF----KPETEFRL---WDCGHNYYAPQSF--NVDGRQIVYGWMSPFVQPIPMED 330
Query: 236 KGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTXXXXXXXXXXXXXPLDIGVAT 295
GW T+PR + + +VV PV E+E LR+++ LD G T
Sbjct: 331 DGWCGQLTLPREITLGDD--GDVVTAPVAEMEGLREDT---------------LDHGSVT 373
Query: 296 QLDISAEFETELLGSGA----MEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFR 351
LD+ E +++ A +E + +R+ GL ++A
Sbjct: 374 -LDMDGE---QIIADDAEAVEIEMTIDLAASTAERA-----GLKIHA------------- 411
Query: 352 SSNTTKGTNTYFCADETRSSLAPDVFKQVHGSK----VPVLQGE----KLSMRILVDHSI 403
T G TY D + D +G + P+ E KL +R+ VD
Sbjct: 412 ---TEDGAYTYVAYDGQIGRVVVDRQAMANGDRGYRAAPLTDAELASGKLDLRVFVDRGS 468
Query: 404 VESFGQGGRTVITSRIYPTKA 424
VE + GG V++S Y ++
Sbjct: 469 VEVYVNGGHQVLSSYSYASEG 489
>pdb|1UYP|A Chain A, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|B Chain B, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|C Chain C, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|D Chain D, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|E Chain E, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|F Chain F, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
Length = 432
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 123/276 (44%), Gaps = 41/276 (14%)
Query: 1 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYP 60
+ PD + +GV++GSA + DG++ ++YT D + LD+VKY
Sbjct: 64 LYPDD--ETHGVFSGSA-VEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYD 120
Query: 61 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS-KIGKTGISLVYQTTDFKTYELLD 119
GNPV+ P G FRDP + +G+WR+ +GS K K G L+Y + D ++ +
Sbjct: 121 GNPVISKPPEEGTHAFRDPKVNRS--NGEWRMVLGSGKDEKIGRVLLYTSDDLFHWK-YE 177
Query: 120 EYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNP 179
+ T EC D + G K +L S+ T +++G
Sbjct: 178 GAIFEDETTKEIECPDLVRI---------------GEKDILIYSITSTNSVLFSMGELKE 222
Query: 180 ANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWIN---ETDTESDDLE 235
N E+ GL D+G +YA+++F+ R +V GW+ T E
Sbjct: 223 GK-----LNVEKR---GL-LDHGTDFYAAQTFFGT--DRVVVIGWLQSWLRTGLYPTKRE 271
Query: 236 KGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQ 271
GW V ++PR + +N + + PV+E+ +LR+
Sbjct: 272 -GWNGVMSLPRELYVEN---NELKVKPVDELLALRK 303
>pdb|1Y9M|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus
Awamori In Spacegroup P212121
pdb|1Y9G|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus
Awamori Complexed With Fructose
pdb|1Y4W|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus
Awamori In Spacegroup P21
Length = 518
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 151/416 (36%), Gaps = 53/416 (12%)
Query: 17 ATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKY-PGNPVLV---PPRHIG 72
A LP GQ V + Q Q++AY D L W Y NPV+ P
Sbjct: 116 AQTLPSGQTVQ-------EDQQSQSIAYSLDDG----LTWTTYDAANPVIPNPPSPYEAE 164
Query: 73 PKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWE 132
++FRDP W KW + + I + +Y + + K ++L+ E+ G+WE
Sbjct: 165 YQNFRDPFVFWHDESQKW--VVVTSIAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWE 222
Query: 133 CVDFYPVAI---NGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNP 189
C + + N + + TS PG S V + T+ P D P N
Sbjct: 223 CPGLVKLPLDSGNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGTTFTPDADTVYPGNS 282
Query: 190 EEDVGIGLKW-DYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRT 247
+ W D+G +YA+ + + GW+N ++ W S IPR
Sbjct: 283 TAN------WMDWGPDFYAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRH 336
Query: 248 V-LYDNKTGSNVVQWPVEEIESLRQNSTXXXXXXXXXXXXXPLDIGVATQLDISAEFETE 306
+ L + + +VQ P E S+ L G F+ +
Sbjct: 337 MALKTIGSKATLVQQPQEAWSSISNKRPIYSRTFKT------LSEGSTNTTTTGETFKVD 390
Query: 307 LLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCAD 366
L S +S F + + A + +E T + + + + D
Sbjct: 391 LSFSA--------------KSKASTFAIALRASANFTEQTLVGYDFAKQQIFLDRTHSGD 436
Query: 367 ETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPT 422
+ V+ HG P G + + I VD S VE FG G T +T++I+P+
Sbjct: 437 VSFDETFASVY---HGPLTPDSTG-VVKLSIFVDRSSVEVFGGQGETTLTAQIFPS 488
>pdb|1W2T|A Chain A, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|B Chain B, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|C Chain C, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|D Chain D, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|E Chain E, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|F Chain F, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
Length = 432
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 41/276 (14%)
Query: 1 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYP 60
+ PD + +GV++GSA + DG++ ++YT D + LD+VKY
Sbjct: 64 LYPDD--ETHGVFSGSA-VEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYD 120
Query: 61 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS-KIGKTGISLVYQTTDFKTYELLD 119
GNPV+ P G FRDP + +G+WR+ +GS K K G L+Y + D ++ +
Sbjct: 121 GNPVISKPPEEGTHAFRDPKVNRS--NGEWRMVLGSGKDEKIGRVLLYTSDDLFHWK-YE 177
Query: 120 EYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNP 179
+ T +C D + G K +L S+ T +++G
Sbjct: 178 GAIFEDETTKEIDCPDLVRI---------------GEKDILIYSITSTNSVLFSMGELKE 222
Query: 180 ANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWIN---ETDTESDDLE 235
N E+ GL D+G +YA+++F+ R +V GW+ T E
Sbjct: 223 GK-----LNVEKR---GL-LDHGTDFYAAQTFFGT--DRVVVIGWLQSWLRTGLYPTKRE 271
Query: 236 KGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQ 271
GW V ++PR + +N + + PV+E+ +LR+
Sbjct: 272 -GWNGVMSLPRELYVEN---NELKVKPVDELLALRK 303
>pdb|4FFH|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFH|B Chain B, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFH|C Chain C, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFH|D Chain D, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFI|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
pdb|4FFI|B Chain B, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
pdb|4FFI|C Chain C, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
pdb|4FFI|D Chain D, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
Length = 492
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 95/440 (21%), Positives = 159/440 (36%), Gaps = 87/440 (19%)
Query: 12 VWTGSATI-------LPDGQIVMLYTGSTD--KSVQVQNLAYPADPS-------DPLLLD 55
VW+GSA + G +V L T TD + Q Q L + D DP++
Sbjct: 68 VWSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFTFTALPDPVI-- 125
Query: 56 WVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTY 115
V G P + FRDP W G+W IG+ + Y + + + +
Sbjct: 126 -VNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCV----IGRLRYAAFYTSPNLRDW 180
Query: 116 ELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKH-VLKASLDDTKVDHYAI 174
L + + G EC D + + + G +H VL AS+ D Y I
Sbjct: 181 TLRRNFDYPNHALGGIECPDLFEITADD-----------GTRHWVLAASM-----DAYGI 224
Query: 175 G---TYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSF--YDPYKKRRIVWGWINETD 228
G TY W + D D+G +YA+ ++ D + +R+ W+N
Sbjct: 225 GLPMTYAYWTGTWDGEQFHADDLTPQWLDWGWDWYAAVTWPSIDAPETKRLAIAWMNNWK 284
Query: 229 TESDDL----EKGWASVQTIPRTVLYDNKTGS--NVVQWPVEEIESLRQNSTXXXXXXXX 282
+ D+ G+ +I R + + G ++ PV + + +T
Sbjct: 285 YAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYVTATTTLPDRTVD 344
Query: 283 XXXXXPLDIGVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSL 342
P + G A ++++ ++T G ++ RS G
Sbjct: 345 GSAVLPWN-GRAYEIELDIAWDTAT-----------NVGISVGRSPDGT----------- 381
Query: 343 SELTPIFFRSSNTTK-GTNTYFCADETRSSLAPDVFKQVHGSKVPVLQGEK-LSMRILVD 400
R +N K G + Y D S LA + P+ G + + +RILVD
Sbjct: 382 --------RHTNIGKYGADLY--VDRGPSDLAGYSLAPYSRAAAPIDPGARSVHLRILVD 431
Query: 401 HSIVESFGQGGRTVITSRIY 420
VE F G TV++ +++
Sbjct: 432 TQSVEVFVNAGHTVLSQQVH 451
>pdb|4FFF|A Chain A, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
pdb|4FFF|B Chain B, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
pdb|4FFF|C Chain C, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
pdb|4FFF|D Chain D, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
Length = 490
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 95/440 (21%), Positives = 159/440 (36%), Gaps = 87/440 (19%)
Query: 12 VWTGSATI-------LPDGQIVMLYTGSTD--KSVQVQNLAYPADPS-------DPLLLD 55
VW+GSA + G +V L T TD + Q Q L + D DP++
Sbjct: 68 VWSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFTFTALPDPVI-- 125
Query: 56 WVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTY 115
V G P + FRDP W G+W IG+ + Y + + + +
Sbjct: 126 -VNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCV----IGRLRYAAFYTSPNLRDW 180
Query: 116 ELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKH-VLKASLDDTKVDHYAI 174
L + + G EC D + + + G +H VL AS+ D Y I
Sbjct: 181 TLRRNFDYPNHALGGIECPDLFEITADD-----------GTRHWVLAASM-----DAYGI 224
Query: 175 G---TYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSF--YDPYKKRRIVWGWINETD 228
G TY W + D D+G +YA+ ++ D + +R+ W+N
Sbjct: 225 GLPMTYAYWTGTWDGEQFHADDLTPQWLDWGWDWYAAVTWPSIDAPETKRLAIAWMNNWK 284
Query: 229 TESDDL----EKGWASVQTIPRTVLYDNKTGS--NVVQWPVEEIESLRQNSTXXXXXXXX 282
+ D+ G+ +I R + + G ++ PV + + +T
Sbjct: 285 YAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYVTATTTLPDRTVD 344
Query: 283 XXXXXPLDIGVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSL 342
P + G A ++++ ++T G ++ RS G
Sbjct: 345 GSAVLPWN-GRAYEIELDIAWDTAT-----------NVGISVGRSPDGT----------- 381
Query: 343 SELTPIFFRSSNTTK-GTNTYFCADETRSSLAPDVFKQVHGSKVPVLQGEK-LSMRILVD 400
R +N K G + Y D S LA + P+ G + + +RILVD
Sbjct: 382 --------RHTNIGKYGADLYV--DRGPSDLAGYSLAPYSRAAAPIDPGARSVHLRILVD 431
Query: 401 HSIVESFGQGGRTVITSRIY 420
VE F G TV++ +++
Sbjct: 432 TQSVEVFVNAGHTVLSQQVH 451
>pdb|4FFG|A Chain A, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
pdb|4FFG|B Chain B, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
pdb|4FFG|C Chain C, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
pdb|4FFG|D Chain D, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
Length = 492
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 95/440 (21%), Positives = 159/440 (36%), Gaps = 87/440 (19%)
Query: 12 VWTGSATI-------LPDGQIVMLYTGSTD--KSVQVQNLAYPADPS-------DPLLLD 55
VW+GSA + G +V L T TD + Q Q L + D DP++
Sbjct: 68 VWSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFTFTALPDPVI-- 125
Query: 56 WVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTY 115
V G P + FRDP W G+W IG+ + Y + + + +
Sbjct: 126 -VNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCV----IGRLRYAAFYTSPNLRDW 180
Query: 116 ELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKH-VLKASLDDTKVDHYAI 174
L + + G EC D + + + G +H VL AS+ D Y I
Sbjct: 181 TLRRNFDYPNHALGGIECPDLFEITADD-----------GTRHWVLAASM-----DAYGI 224
Query: 175 G---TYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSF--YDPYKKRRIVWGWINETD 228
G TY W + D D+G +YA+ ++ D + +R+ W+N
Sbjct: 225 GLPMTYAYWTGTWDGEQFHADDLTPQWLDWGWDWYAAVTWPSIDAPETKRLAIAWMNNWK 284
Query: 229 TESDDL----EKGWASVQTIPRTVLYDNKTGS--NVVQWPVEEIESLRQNSTXXXXXXXX 282
+ D+ G+ +I R + + G ++ PV + + +T
Sbjct: 285 YAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYVTATTTLPDRTVD 344
Query: 283 XXXXXPLDIGVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSL 342
P + G A ++++ ++T G ++ RS G
Sbjct: 345 GSAVLPWN-GRAYEIELDIAWDTAT-----------NVGISVGRSPDGT----------- 381
Query: 343 SELTPIFFRSSNTTK-GTNTYFCADETRSSLAPDVFKQVHGSKVPVLQGEK-LSMRILVD 400
R +N K G + Y D S LA + P+ G + + +RILVD
Sbjct: 382 --------RHTNIGKYGADLY--VDRGPSDLAGYSLAPYSRAAAPIDPGARSVHLRILVD 431
Query: 401 HSIVESFGQGGRTVITSRIY 420
VE F G TV++ +++
Sbjct: 432 TQSVEVFVNAGHTVLSQQVH 451
>pdb|3KF5|A Chain A, Structure Of Invertase From Schwanniomyces Occidentalis
pdb|3KF5|B Chain B, Structure Of Invertase From Schwanniomyces Occidentalis
Length = 512
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 12/129 (9%)
Query: 16 SATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKD 75
+++I P+ +IV +YT + + Q Q++A+ D + KY NPV+ +
Sbjct: 103 NSSIDPNQRIVAIYTNNIPDN-QTQDIAFSLDGG----YTFTKYENNPVI----DVSSNQ 153
Query: 76 FRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVD 135
FRDP W +W + + SK + I ++ + + K + L + G +EC
Sbjct: 154 FRDPKVFWHEDSNQWIMVV-SKSQEYKIQ-IFGSANLKNWVLNSNFSSGYYG-NQYECPG 210
Query: 136 FYPVAINGS 144
V I S
Sbjct: 211 LIEVPIENS 219
>pdb|3KF3|A Chain A, Structure Of Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructose
pdb|3KF3|B Chain B, Structure Of Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructose
Length = 509
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 12/129 (9%)
Query: 16 SATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKD 75
+++I P+ +IV +YT + + Q Q++A+ D + KY NPV+ +
Sbjct: 100 NSSIDPNQRIVAIYTNNIPDN-QTQDIAFSLDGG----YTFTKYENNPVI----DVSSNQ 150
Query: 76 FRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVD 135
FRDP W +W + + SK + I ++ + + K + L + G +EC
Sbjct: 151 FRDPKVFWHEDSNQWIMVV-SKSQEYKIQ-IFGSANLKNWVLNSNFSSGYYG-NQYECPG 207
Query: 136 FYPVAINGS 144
V I S
Sbjct: 208 LIEVPIENS 216
>pdb|3U14|A Chain A, Structure Of D50a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Inulin
pdb|3U14|B Chain B, Structure Of D50a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Inulin
Length = 535
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 12/129 (9%)
Query: 16 SATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKD 75
+++I P+ +IV +YT + + Q Q++A+ D + KY NPV+ +
Sbjct: 126 NSSIDPNQRIVAIYTNNIPDN-QTQDIAFSLDGG----YTFTKYENNPVI----DVSSNQ 176
Query: 76 FRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVD 135
FRDP W +W + + SK + I ++ + + K + L + G +EC
Sbjct: 177 FRDPKVFWHEDSNQWIMVV-SKSQEYKIQ-IFGSANLKNWVLNSNFSSGYYG-NQYECPG 233
Query: 136 FYPVAINGS 144
V I S
Sbjct: 234 LIEVPIENS 242
>pdb|3U75|A Chain A, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
pdb|3U75|B Chain B, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
pdb|3U75|C Chain C, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
pdb|3U75|D Chain D, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
Length = 535
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 16 SATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKD 75
+++I P+ +IV +YT + + Q Q++A+ D + KY NPV+ +
Sbjct: 126 NSSIDPNQRIVAIYTNNIPDN-QTQDIAFSLDGG----YTFTKYENNPVI----DVSSNQ 176
Query: 76 FRDPTTAWAGPDGKWRLTIG 95
FRDP W +W + +
Sbjct: 177 FRDPKVFWHEDSNQWIMVVS 196
>pdb|3SC7|X Chain X, First Crystal Structure Of An Endo-Inulinase, From
Aspergillus Ficuum: Structural Analysis And Comparison
With Other Gh32 Enzymes.
pdb|3RWK|X Chain X, First Crystal Structure Of An Endo-Inulinase, From
Aspergillus Ficuum: Structural Analysis And Comparison
With Other Gh32 Enzymes
Length = 516
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 380 VHGSKVPVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPTKAIYGAARLFLFNNA 437
VH +K+ +S+R+LVD VE FG G VI+ I+P+ + G A NA
Sbjct: 446 VHTAKLEEDGTGLVSIRVLVDTCSVEVFGGQGEAVISDLIFPSDSSDGLALEVTGGNA 503
>pdb|1Y23|A Chain A, Crystal Structure Of A Member Of Hit Family Of Proteins
From Bacillus Subtilis
pdb|1Y23|B Chain B, Crystal Structure Of A Member Of Hit Family Of Proteins
From Bacillus Subtilis
pdb|1Y23|C Chain C, Crystal Structure Of A Member Of Hit Family Of Proteins
From Bacillus Subtilis
pdb|1Y23|D Chain D, Crystal Structure Of A Member Of Hit Family Of Proteins
From Bacillus Subtilis
pdb|1Y23|E Chain E, Crystal Structure Of A Member Of Hit Family Of Proteins
From Bacillus Subtilis
Length = 145
Score = 30.4 bits (67), Expect = 2.3, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 98 IGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAIN 142
I KT I VY+ TD EL +Y HAVP +F P+ +N
Sbjct: 45 IPKTHIENVYEFTD----ELAKQYFHAVPKIARAIRDEFEPIGLN 85
>pdb|1A47|A Chain A, Cgtase From Thermoanaerobacterium Thermosulfurigenes Em1
In Complex With A Maltohexaose Inhibitor
pdb|1CIU|A Chain A, Thermostable Cgtase From Thermoanaerobacterium
Thermosulfurigenes Em1 At Ph 8.0
Length = 683
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 318 GCSGGAIDRSAMGPFGLLVNAHDSLSELTPIF-----FRSSNTTKGTNTYFCADETRSSL 372
G G +D PFG N DS+ P+F F +N NTYF A+E+ SL
Sbjct: 223 GIDGIRLDAVKHMPFGWQKNFMDSILSYRPVFTFGEWFLGTNEIDVNNTYF-ANESGMSL 281
Query: 373 APDVFKQ 379
F Q
Sbjct: 282 LDFRFSQ 288
>pdb|3BMV|A Chain A, Cyclodextrin Glycosyl Transferase From
Thermoanerobacterium Thermosulfurigenes Em1 Mutant S77p
pdb|3BMW|A Chain A, Cyclodextrin Glycosyl Transferase From
Thermoanerobacterium Thermosulfurigenes Em1 Mutant S77p
Complexed With A Maltoheptaose Inhibitor
Length = 683
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 318 GCSGGAIDRSAMGPFGLLVNAHDSLSELTPIF-----FRSSNTTKGTNTYFCADETRSSL 372
G G +D PFG N DS+ P+F F +N NTYF A+E+ SL
Sbjct: 223 GIDGIRLDAVKHMPFGWQKNFMDSILSYRPVFTFGEWFLGTNEIDVNNTYF-ANESGMSL 281
Query: 373 APDVFKQ 379
F Q
Sbjct: 282 LDFRFSQ 288
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.136 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,335,048
Number of Sequences: 62578
Number of extensions: 679824
Number of successful extensions: 1574
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1506
Number of HSP's gapped (non-prelim): 38
length of query: 464
length of database: 14,973,337
effective HSP length: 102
effective length of query: 362
effective length of database: 8,590,381
effective search space: 3109717922
effective search space used: 3109717922
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)