Query 012389
Match_columns 464
No_of_seqs 192 out of 1401
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 02:07:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012389.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012389hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0228 Beta-fructofuranosidas 100.0 1.3E-77 2.8E-82 598.6 31.2 454 1-454 108-570 (571)
2 COG1621 SacC Beta-fructosidase 100.0 5.6E-74 1.2E-78 588.8 39.8 382 1-453 90-486 (486)
3 TIGR01322 scrB_fam sucrose-6-p 100.0 8.3E-67 1.8E-71 545.6 41.9 360 1-422 75-445 (445)
4 smart00640 Glyco_32 Glycosyl h 100.0 4.3E-66 9.3E-71 538.8 44.0 365 1-411 58-437 (437)
5 PF00251 Glyco_hydro_32N: Glyc 100.0 5.1E-53 1.1E-57 422.0 24.1 242 1-262 58-308 (308)
6 cd08996 GH32_B_Fructosidase Gl 100.0 1E-47 2.2E-52 382.1 27.3 241 1-265 52-298 (298)
7 cd08995 GH32_Aec43_like Glycos 100.0 2.1E-40 4.5E-45 326.8 23.9 216 4-255 54-278 (280)
8 cd08979 GH_J Glycosyl hydrolas 100.0 6.5E-28 1.4E-32 236.3 21.0 197 2-227 56-264 (276)
9 cd08772 GH43_62_32_68 Glycosyl 99.9 4.7E-23 1E-27 202.3 21.6 228 3-248 51-285 (286)
10 cd08997 GH68 Glycosyl hydrolas 99.8 5.1E-19 1.1E-23 177.2 17.4 144 1-150 60-254 (349)
11 cd08994 GH43_like_2 Glycosyl h 99.7 4.8E-16 1E-20 154.1 13.7 133 7-150 141-290 (291)
12 PF08244 Glyco_hydro_32C: Glyc 99.4 3.8E-12 8.3E-17 102.9 10.3 73 331-411 10-86 (86)
13 cd08993 GH43_DUF377 Glycosyl h 99.1 5.5E-10 1.2E-14 109.5 13.0 100 13-121 1-104 (268)
14 cd08984 GH43_5 Glycosyl hydrol 99.1 1.2E-09 2.5E-14 108.7 12.7 113 7-140 130-246 (294)
15 cd08993 GH43_DUF377 Glycosyl h 99.0 1.6E-09 3.5E-14 106.2 12.0 104 4-123 51-159 (268)
16 cd09004 GH43_bXyl Glycosyl hyd 98.9 1.5E-08 3.2E-13 99.7 13.6 126 5-150 59-185 (275)
17 cd08994 GH43_like_2 Glycosyl h 98.9 3.6E-08 7.7E-13 97.8 16.0 129 5-140 73-215 (291)
18 cd08999 GH43_ABN_2 Glycosyl hy 98.8 1.3E-07 2.9E-12 93.3 16.4 125 7-140 57-189 (287)
19 PF04041 DUF377: Domain of unk 98.8 2.2E-08 4.8E-13 100.2 9.2 105 9-122 29-136 (312)
20 cd08979 GH_J Glycosyl hydrolas 98.8 7E-08 1.5E-12 94.3 12.5 125 7-141 1-142 (276)
21 cd08990 GH43_AXH_like Glycosyl 98.7 2.1E-07 4.5E-12 91.6 14.2 132 7-151 59-195 (274)
22 cd08978 GH_F Glycosyl hydrolas 98.6 7.9E-07 1.7E-11 86.5 15.3 127 3-140 50-181 (271)
23 cd08983 GH43_4 Glycosyl hydrol 98.6 9E-08 2E-12 94.4 8.6 87 60-149 4-96 (276)
24 PF04041 DUF377: Domain of unk 98.4 2.6E-07 5.6E-12 92.5 5.7 118 1-133 81-201 (312)
25 cd08986 GH43_7 Glycosyl hydrol 98.4 3.1E-06 6.7E-11 83.1 11.9 65 75-140 1-88 (269)
26 cd08991 GH43_bXyl_2 Glycosyl h 98.3 1.8E-05 3.8E-10 78.6 15.3 123 6-140 49-193 (294)
27 cd08984 GH43_5 Glycosyl hydrol 98.3 2.3E-05 4.9E-10 78.0 15.5 115 14-140 13-144 (294)
28 cd08989 GH43_XYL Glycosyl hydr 98.3 9.5E-06 2.1E-10 79.7 12.4 68 62-140 1-77 (269)
29 COG2152 Predicted glycosylase 98.3 2.5E-06 5.3E-11 82.8 7.9 109 6-123 21-140 (314)
30 PF02435 Glyco_hydro_68: Levan 98.2 1.5E-05 3.3E-10 81.5 12.4 126 10-140 130-309 (428)
31 cd08981 GH43_2 Glycosyl hydrol 98.1 3.3E-05 7.1E-10 76.8 13.3 67 74-140 4-77 (291)
32 cd08999 GH43_ABN_2 Glycosyl hy 98.1 3.2E-05 6.9E-10 76.3 12.9 67 62-140 1-71 (287)
33 cd09002 GH43_XYL_3 Glycosyl hy 98.1 3.7E-05 8.1E-10 75.9 12.8 68 61-140 7-74 (280)
34 cd08992 GH43_like_1 Glycosyl h 98.0 0.00013 2.9E-09 73.7 15.0 107 4-118 104-241 (349)
35 cd08992 GH43_like_1 Glycosyl h 98.0 4.6E-05 1E-09 77.0 11.6 119 4-140 184-310 (349)
36 cd08995 GH32_Aec43_like Glycos 98.0 0.00014 3.1E-09 71.6 14.5 114 17-140 5-131 (280)
37 cd08998 GH43_ABN_1 Glycosyl hy 98.0 0.00028 6E-09 69.9 16.0 124 7-140 53-182 (288)
38 cd08985 GH43_6 Glycosyl hydrol 97.9 0.00046 1E-08 67.6 16.0 118 6-140 59-179 (265)
39 cd08996 GH32_B_Fructosidase Gl 97.9 0.00021 4.6E-09 71.0 13.4 112 21-140 12-134 (298)
40 PF04616 Glyco_hydro_43: Glyco 97.7 0.00033 7.1E-09 68.9 11.3 68 62-140 3-76 (286)
41 cd08991 GH43_bXyl_2 Glycosyl h 97.7 0.00052 1.1E-08 68.0 12.5 59 78-140 2-64 (294)
42 cd08983 GH43_4 Glycosyl hydrol 97.7 0.00068 1.5E-08 66.8 13.0 130 9-152 15-155 (276)
43 cd08978 GH_F Glycosyl hydrolas 97.6 0.001 2.3E-08 64.5 13.3 124 15-150 3-132 (271)
44 smart00640 Glyco_32 Glycosyl h 97.6 0.00069 1.5E-08 71.3 12.7 111 21-140 18-143 (437)
45 PF04616 Glyco_hydro_43: Glyco 97.5 0.0028 6.1E-08 62.2 15.0 115 13-140 68-189 (286)
46 cd09001 GH43_XYL_2 Glycosyl hy 97.5 0.00081 1.8E-08 66.0 10.3 69 61-140 3-85 (269)
47 cd08772 GH43_62_32_68 Glycosyl 97.4 0.0015 3.2E-08 63.7 11.1 118 15-140 3-131 (286)
48 cd09003 GH43_AXH_1 Glycosyl hy 97.4 0.0018 4E-08 64.9 11.6 126 10-150 76-213 (311)
49 cd09000 GH43_XYL_1 Glycosyl hy 97.3 0.0029 6.4E-08 62.6 12.2 116 8-140 64-186 (288)
50 cd08998 GH43_ABN_1 Glycosyl hy 97.3 0.0037 8.1E-08 61.8 12.8 94 14-123 3-107 (288)
51 COG2152 Predicted glycosylase 97.2 0.00064 1.4E-08 66.3 6.2 106 1-122 83-192 (314)
52 cd09000 GH43_XYL_1 Glycosyl hy 97.2 0.0037 7.9E-08 61.9 11.8 68 62-140 1-77 (288)
53 TIGR01322 scrB_fam sucrose-6-p 97.0 0.0076 1.6E-07 63.6 12.7 110 21-139 35-155 (445)
54 cd09004 GH43_bXyl Glycosyl hyd 96.9 0.0036 7.7E-08 61.5 8.5 69 62-140 1-75 (275)
55 cd08988 GH43_ABN Glycosyl hydr 96.9 0.011 2.4E-07 58.3 11.6 56 77-140 1-66 (279)
56 cd08988 GH43_ABN Glycosyl hydr 96.6 0.038 8.3E-07 54.5 13.4 124 9-140 54-183 (279)
57 cd08985 GH43_6 Glycosyl hydrol 96.6 0.045 9.7E-07 53.6 13.5 66 75-142 2-76 (265)
58 cd08980 GH43_1 Glycosyl hydrol 96.5 0.1 2.2E-06 51.5 15.4 121 8-140 51-184 (288)
59 cd09003 GH43_AXH_1 Glycosyl hy 96.1 0.01 2.3E-07 59.5 6.2 70 62-140 1-87 (311)
60 cd08981 GH43_2 Glycosyl hydrol 96.0 0.12 2.6E-06 51.3 13.0 79 7-96 63-142 (291)
61 PF00251 Glyco_hydro_32N: Glyc 95.9 0.18 3.8E-06 50.5 14.0 111 21-140 18-138 (308)
62 cd08990 GH43_AXH_like Glycosyl 95.8 0.058 1.3E-06 52.9 9.6 96 16-121 4-109 (274)
63 cd09001 GH43_XYL_2 Glycosyl hy 95.5 0.1 2.2E-06 51.1 10.4 114 9-150 73-189 (269)
64 cd08989 GH43_XYL Glycosyl hydr 95.3 0.2 4.4E-06 49.1 11.5 120 9-150 65-187 (269)
65 cd08980 GH43_1 Glycosyl hydrol 94.9 0.36 7.7E-06 47.6 12.1 96 15-122 3-106 (288)
66 cd08982 GH43_3 Glycosyl hydrol 94.8 0.07 1.5E-06 53.2 6.9 54 75-140 2-55 (295)
67 PF13088 BNR_2: BNR repeat-lik 94.8 0.27 5.9E-06 47.8 10.8 91 23-122 1-98 (275)
68 cd08987 GH62 Glycosyl hydrolas 93.9 0.14 3E-06 50.3 6.4 89 54-164 5-98 (303)
69 cd08982 GH43_3 Glycosyl hydrol 93.9 1.4 2.9E-05 43.9 13.7 68 9-96 43-110 (295)
70 PF13088 BNR_2: BNR repeat-lik 93.6 0.24 5.2E-06 48.1 7.8 119 10-140 46-168 (275)
71 cd08997 GH68 Glycosyl hydrolas 93.1 0.65 1.4E-05 47.3 10.0 95 14-117 154-284 (349)
72 cd08986 GH43_7 Glycosyl hydrol 92.5 0.69 1.5E-05 45.3 9.1 94 15-117 5-121 (269)
73 PF13859 BNR_3: BNR repeat-lik 92.1 0.77 1.7E-05 46.0 8.9 86 15-117 124-211 (310)
74 cd08987 GH62 Glycosyl hydrolas 91.7 4.4 9.6E-05 40.1 13.3 136 11-178 77-219 (303)
75 PF13810 DUF4185: Domain of un 89.9 1.3 2.8E-05 44.6 8.2 93 20-120 102-211 (316)
76 cd00260 Sialidase Sialidases o 89.2 2.6 5.7E-05 42.5 10.0 89 17-120 151-240 (351)
77 cd09002 GH43_XYL_3 Glycosyl hy 88.8 1.3 2.9E-05 43.6 7.3 73 9-96 62-134 (280)
78 COG3507 XynB Beta-xylosidase [ 85.1 6.6 0.00014 42.0 10.1 123 8-150 87-223 (549)
79 cd00260 Sialidase Sialidases o 84.1 17 0.00037 36.6 12.7 118 10-140 74-207 (351)
80 PTZ00334 trans-sialidase; Prov 77.7 14 0.0003 41.5 9.9 83 17-118 265-349 (780)
81 COG3507 XynB Beta-xylosidase [ 75.3 2.5 5.4E-05 45.1 3.2 76 61-149 22-107 (549)
82 COG1621 SacC Beta-fructosidase 69.4 1E+02 0.0022 33.0 13.5 94 21-122 50-151 (486)
83 PF02012 BNR: BNR/Asp-box repe 61.1 6.6 0.00014 19.6 1.3 11 44-58 2-12 (12)
84 KOG0228 Beta-fructofuranosidas 58.8 33 0.00071 36.5 7.3 91 21-120 68-168 (571)
85 PF00337 Gal-bind_lectin: Gala 46.5 39 0.00085 28.9 4.9 30 385-415 77-106 (133)
86 PF06905 FAIM1: Fas apoptotic 39.1 41 0.00088 30.9 3.9 31 393-424 108-138 (177)
87 PF06439 DUF1080: Domain of Un 38.9 1.4E+02 0.0029 26.7 7.5 58 389-448 126-184 (185)
88 PF02435 Glyco_hydro_68: Levan 38.2 3.2E+02 0.0069 28.8 10.7 75 14-97 212-319 (428)
89 cd00070 GLECT Galectin/galacto 36.5 64 0.0014 27.5 4.7 30 385-415 72-101 (127)
90 smart00276 GLECT Galectin. Gal 34.5 73 0.0016 27.2 4.7 31 385-416 71-101 (128)
91 PF03664 Glyco_hydro_62: Glyco 30.8 2.7E+02 0.0059 27.0 8.0 88 54-163 7-95 (271)
92 PF15092 UPF0728: Uncharacteri 26.0 1.3E+02 0.0029 24.1 4.3 30 389-419 37-66 (88)
93 COG3940 Predicted beta-xylosid 25.5 1E+02 0.0022 29.1 4.2 62 3-67 182-248 (324)
94 PF13859 BNR_3: BNR repeat-lik 25.4 3.7E+02 0.0081 26.9 8.6 99 15-122 2-109 (310)
95 PF03664 Glyco_hydro_62: Glyco 20.3 8E+02 0.017 23.9 9.8 93 14-123 27-123 (271)
No 1
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-77 Score=598.65 Aligned_cols=454 Identities=47% Similarity=0.831 Sum_probs=386.5
Q ss_pred CCCCCccCCCCEEEeEEEEcCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCC--CCCCCCCeec
Q 012389 1 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP--RHIGPKDFRD 78 (464)
Q Consensus 1 l~P~~~~D~~Gv~SGsa~~~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p--~~~~~~~~RD 78 (464)
|.|+++||.+|||||||+++.+|..+++|||......|.|.+|+..|-+|+.|+.|+|.++||++.++ .++....|||
T Consensus 108 i~Ps~~~ding~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~gnp~~~p~~V~~in~s~FRD 187 (571)
T KOG0228|consen 108 IAPSEWFDINGCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDGGNPFMKPDKVLGINSSQFRD 187 (571)
T ss_pred cCCCCccccCccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheeecCCCceeeccccccCCChhhccC
Confidence 67999999999999999999999999999999988889999999999999999999999999999887 5667789999
Q ss_pred CcceeecCCCcEEEEEEeecCCceEEEEEEeCCCCCCeEcceeeecCCCCCceEeceEEEecccCccceeecCCCCCeEE
Q 012389 79 PTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKH 158 (464)
Q Consensus 79 P~V~w~~~~g~~~mv~ga~~~~~g~~~ly~S~Dl~~W~~~g~l~~~~~~~g~wECPdlf~l~~~~~~~l~~~~~g~~~~~ 158 (464)
|+++|++++|+|+|++|+..+.+|.+++|+|+||++|+....+.+....+|||||||||++..++.+.+-.+..++..|+
T Consensus 188 PttaW~~~dgkWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPdffpVs~tg~~g~d~s~~~~~nkh 267 (571)
T KOG0228|consen 188 PTTAWFGQDGKWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPDFFPVSITGTDGLDWSLFGSINKH 267 (571)
T ss_pred CceeeecCCCcEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceEECCCcEEecccCCCCceEEEecccccc
Confidence 99999999999999999998788999999999999999998888766667899999999999999887777666666799
Q ss_pred EEEEeeCCCCeeEEEEEEEeCCCCeeecCCCCcccccceeeccceeeecceeecCCCCcEEEEEeccCCCCCCCCcCCCc
Q 012389 159 VLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGW 238 (464)
Q Consensus 159 vl~~s~~~~~~~~y~iG~~d~~~~~f~~~~~~~d~~~~~~~D~GdfYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW 238 (464)
|++.|..+.+..+|+||+||+++.+|+|+....+.....+.|||.|||.|||.|..++|||+|||+++|++.....+.||
T Consensus 268 vlkasl~gt~~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~~rrIlwgWa~es~~~~dd~~kgw 347 (571)
T KOG0228|consen 268 VLKASLGGTSNDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVKGRRILWGWASESDYTNDDPTKGW 347 (571)
T ss_pred ccccccCCceeEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhccccCCcEEEEEecccCcccccchhccc
Confidence 99999988889999999999988899998755544333578999999999999988999999999999999888889999
Q ss_pred cccceecEEEEEEecCCceEEeechHHHHhcccCceeeeeEEEcCCceeeeccccceeEEEEEEEEee-ecccC--cc--
Q 012389 239 ASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETE-LLGSG--AM-- 313 (464)
Q Consensus 239 ~g~lslPRel~l~~~~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~f~~~-~~~~~--~~-- 313 (464)
+|+||+||++.|++..|+.|.|.|+.|++.||.......+..+.+++.......++.+.+++..|+++ ++.+. +.
T Consensus 348 ~g~qtipRki~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~~t~~q~dvev~f~~~~Leka~~~~~~~ 427 (571)
T KOG0228|consen 348 RGLQTIPRKIWLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSGITAAQADVEVTFEVEDLEKAIVIEPSW 427 (571)
T ss_pred ccccccceEEEeeccCCCcccccchheeecccccccCccccccCCceeEEecccccccccceEEEEecccccccccCccc
Confidence 99999999999987457799999999999999998887777777777777777778888888888876 44321 11
Q ss_pred -ccccccc-CCCcccccccceEEEEEEcCCCCceEEEEEEeccCCCCCeeeEEeecCCCCCCCCccccccceEEecccCC
Q 012389 314 -EEGYGCS-GGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHGSKVPVLQGE 391 (464)
Q Consensus 314 -~~~~~~~-~~~~~~~~~~~~gl~v~~~~~~~e~t~i~~~~~~~~~g~~~~~~vdr~~s~~~~~~~~~~~~~~~p~~~~~ 391 (464)
+-.+.|. .++..++..++||+..+++.+++|.|.+.+.+.+...+-...+|-|-.+|++..+..+..+++.+++...+
T Consensus 428 t~~~~~c~~~~~~v~~~~gpfgl~~la~~dl~eyt~v~f~i~k~~~~~~v~~csd~~~sSl~~d~~k~~~~afvdv~~~~ 507 (571)
T KOG0228|consen 428 TDPQFLCLTGGSSVREGLGPFGLMVLASSDLEEYTPVGFRIFKAKKKYVVLMCSDQSRSSLAEDNYKPSIGAFVDVYPHQ 507 (571)
T ss_pred cccceeeecCCcccccCCCcceEEEEeecCcccceeeeEEEeecCCcceeEEeccCCCccccccccccceeeEEEecCCC
Confidence 1234564 34445566679999999999999999999988774332245577777888887777777777788887789
Q ss_pred eEEEEEEEecceEEEEEeCCeeEEEEEeecCccccCccEEEEEEcCCCcEEEEEEEEeecCcc
Q 012389 392 KLSMRILVDHSIVESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNSA 454 (464)
Q Consensus 392 ~~~LrIfvD~S~vEvF~N~G~~~~T~rvyp~~~~~~~~~i~~~~~~~~~~~~~~l~~w~m~s~ 454 (464)
+++||++||+|+||.|+|+|+.|+|+||||..+......+++|+.|.......++.+|+|+++
T Consensus 508 ~islr~LiDhsivEsyg~~G~t~iTsrvyp~~ai~~~~~lf~fn~g~~~v~v~sl~aw~m~~~ 570 (571)
T KOG0228|consen 508 KISLRSLIDHSIVESYGNGGKTVITSRVYPTLAIGEGAHLFVFNNGSQLVNVTSLNAWSMKNA 570 (571)
T ss_pred ccchhhhhhhhhHHHhccCCcEEEEeeeeeeecccccceEEEecccccceEEEEeehhhcccC
Confidence 999999999999999999999999999999998766778888876554433239999999875
No 2
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.6e-74 Score=588.77 Aligned_cols=382 Identities=29% Similarity=0.545 Sum_probs=291.6
Q ss_pred CCCCCccCCCCEEEeEEEEcCCCcEEEEEcccCCC----CeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCe
Q 012389 1 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDF 76 (464)
Q Consensus 1 l~P~~~~D~~Gv~SGsa~~~~~g~~~~~YTg~~~~----~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~ 76 (464)
|.|+++||.+||||||||+ .+|.+.+||||+.+. +.+.||+|+|+|+ .+|+|+.+|||+..|+++ +.||
T Consensus 90 L~Pd~~~d~~g~ySGSAV~-~~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p~~~-t~hF 162 (486)
T COG1621 90 LAPDDDYDSHGCYSGSAVV-DDGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQPEGY-TPHF 162 (486)
T ss_pred ecCCCccccCCceeeeEEE-eCCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCCCcc-cccC
Confidence 6899999999999999986 799999999999752 5789999999996 799997678999888887 7899
Q ss_pred ecCcceeecCCCcEEEEEEee-cCCceEEEEEEeCCCCCCeEcceeeecCCCCC-ceEeceEEEecccCccceeecCCCC
Q 012389 77 RDPTTAWAGPDGKWRLTIGSK-IGKTGISLVYQTTDFKTYELLDEYLHAVPGTG-MWECVDFYPVAINGSVGLDTSATGP 154 (464)
Q Consensus 77 RDP~V~w~~~~g~~~mv~ga~-~~~~g~~~ly~S~Dl~~W~~~g~l~~~~~~~g-~wECPdlf~l~~~~~~~l~~~~~g~ 154 (464)
|||||+|+ ++++|+|++||+ .+..|.++||+|+||++|++.|++..+....| ||||||||+|+++ .++++|++|
T Consensus 163 RDPKv~w~-~~~~~~~mlgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~~~--~~~~~~pqg- 238 (486)
T COG1621 163 RDPKVVWD-EGGKWWMMLGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELDGE--DVLLFWPQG- 238 (486)
T ss_pred CCCccccc-CCCcEEEEEEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEecCc--CceEEccee-
Confidence 99997796 789999999998 46788999999999999999999986644445 9999999999854 566666655
Q ss_pred CeEEEEEEeeCCC-----CeeEEEEEEEeCCCCeeecCCCCcccccceeeccc-eeeecceeecCCCCcEEEEEeccCCC
Q 012389 155 GIKHVLKASLDDT-----KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETD 228 (464)
Q Consensus 155 ~~~~vl~~s~~~~-----~~~~y~iG~~d~~~~~f~~~~~~~d~~~~~~~D~G-dfYA~qtf~d~~~grri~~gW~~~~~ 228 (464)
.+.++. ....|++|+||++ .|...... .++||+| ||||||+|.++ +||||++|||++|+
T Consensus 239 -------~~~~~~~~~n~~~~~Y~vG~~dg~--~f~~~~~~-----~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~ 303 (486)
T COG1621 239 -------LSINGGEYDNIYQSGYFVGDFDGK--EFKLDDGQ-----FRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWD 303 (486)
T ss_pred -------eecCCCcCCCcceeEEEEEeeccc--eeEecCCC-----ceecccCccccceeeccCC-CCCEEEEEeccCcc
Confidence 333321 2367999999987 66654432 4789999 99999999997 89999999999999
Q ss_pred CC--CCCcCCCccccceecEEEEEEecCCceEEeechHHHHhcccCceeeeeEEEcCCceeeeccccceeEEEEEEEEee
Q 012389 229 TE--SDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETE 306 (464)
Q Consensus 229 ~~--~~~~~~gW~g~lslPRel~l~~~~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~f~~~ 306 (464)
+. .|+...+|+|||||||||+|+ +| +|+|+|++||++||.++..+.+..++... .+...++.++++. +.+.
T Consensus 304 ~~~~~PT~~~~w~~~mTlpRel~l~--~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~~~~--~l~~~~~~~~~l~--~~~~ 376 (486)
T COG1621 304 YTNNYPTIDEGWRGAMTLPRELTLE--DG-KLYQTPVRELESLRKPEEAAHNTTLSGNS--KLELPSGDAYELD--LDLI 376 (486)
T ss_pred ccCCCCccccCcCccceeeEEEEEc--CC-eEEecchHHHHhhhcccccccccccccce--eeeccCCccEEEE--EEee
Confidence 87 677778999999999999996 35 89999999999999997777777766542 2333334444432 2221
Q ss_pred ecccCcccccccccCCCcccccccceEEEEEEcCCCCceEEEEEEeccCCCCCeeeEEeecCCC-CCCCCccccccceEE
Q 012389 307 LLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRS-SLAPDVFKQVHGSKV 385 (464)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~e~t~i~~~~~~~~~g~~~~~~vdr~~s-~~~~~~~~~~~~~~~ 385 (464)
.. | ...+|+.++.+.. .+.++... ..+++||++| ........ ...+
T Consensus 377 --~~--------~---------~~~~~~~l~~~~~-----~~~~~~~~------~~l~ldR~~s~~f~~~~~~---~r~~ 423 (486)
T COG1621 377 --WT--------D---------ATSFGLELRMGLN-----LVGYDVEN------ETLTLDRSDSPLFTVQDGE---TREC 423 (486)
T ss_pred --cc--------c---------cceEEEEeecCcc-----eecccccc------ceEEEeccccccccccCCc---eeee
Confidence 11 0 0136787765432 33343322 2589999987 11111111 1123
Q ss_pred ecccCCeEEEEEEEecceEEEEEeCCeeEEEEEeecCccccCccEEEEEEcCCCcEEEEEEEEeecCc
Q 012389 386 PVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNS 453 (464)
Q Consensus 386 p~~~~~~~~LrIfvD~S~vEvF~N~G~~~~T~rvyp~~~~~~~~~i~~~~~~~~~~~~~~l~~w~m~s 453 (464)
.+....+++||||||+|+||||+|+|+.+||+||||... ..+|++.+.++.+ ....++|.+++
T Consensus 424 ~~~~~~~v~l~if~D~ssvEiF~NdGe~v~T~rifp~~~---~~~i~l~~~~g~~--~~~~~~~~l~~ 486 (486)
T COG1621 424 FIENGAKVHLRIFVDNSSVEIFINDGEKVFTSRIFPTPD---ANGISLYSDQGVA--VVQNTIWPLKS 486 (486)
T ss_pred ccCCCceEEEEEEEeCCeEEEEEcCCceEEEEEecCCCc---ccceEEEccCceE--EEEeeeeccCC
Confidence 333344589999999999999999999999999999986 4688888765433 34558888864
No 3
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=100.00 E-value=8.3e-67 Score=545.64 Aligned_cols=360 Identities=28% Similarity=0.485 Sum_probs=267.8
Q ss_pred CCCCCccCCCCEEEeEEEEcCCCcEEEEEcccCC----CCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCe
Q 012389 1 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDF 76 (464)
Q Consensus 1 l~P~~~~D~~Gv~SGsa~~~~~g~~~~~YTg~~~----~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~ 76 (464)
|.|+++||++|||||||++ .+|+++|||||+.. ...+.||+|+|+|+ .+|+|++ +|||.++++....+|
T Consensus 75 l~P~~~~d~~G~~sGsav~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~~~~~~~~f 147 (445)
T TIGR01322 75 LAPDDPYDSHGCYSGSAVD-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELPPAGYTAHF 147 (445)
T ss_pred CcCCCcccCCceEECeEEe-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCCCCCCcCcC
Confidence 5799999999999999986 79999999999753 23578999999986 7999974 599986544335789
Q ss_pred ecCcceeecCCCcEEEEEEeec-CCceEEEEEEeCCCCCCeEcceeeecC----CCCC-ceEeceEEEecccCccceeec
Q 012389 77 RDPTTAWAGPDGKWRLTIGSKI-GKTGISLVYQTTDFKTYELLDEYLHAV----PGTG-MWECVDFYPVAINGSVGLDTS 150 (464)
Q Consensus 77 RDP~V~w~~~~g~~~mv~ga~~-~~~g~~~ly~S~Dl~~W~~~g~l~~~~----~~~g-~wECPdlf~l~~~~~~~l~~~ 150 (464)
|||+| |+ .+|+|||++|++. +..|.+++|+|+||++|++.+++.... ...| |||||+||+|+ ++.+|++|
T Consensus 148 RDP~V-~~-~~g~~~M~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~--~k~vL~~s 223 (445)
T TIGR01322 148 RDPKV-WK-HNGHWYMVIGAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLD--GQDVLLFS 223 (445)
T ss_pred CCCcE-Ee-ECCEEEEEEEEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEEC--CcEEEEEe
Confidence 99999 65 4689999999974 556899999999999999999987542 2234 99999999997 45677777
Q ss_pred CCCCCeEEEEEEeeCCCCeeEEEEEEEeCCCCeeecCCCCcccccceeeccc-eeeecceeecCCCCcEEEEEeccCCCC
Q 012389 151 ATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDT 229 (464)
Q Consensus 151 ~~g~~~~~vl~~s~~~~~~~~y~iG~~d~~~~~f~~~~~~~d~~~~~~~D~G-dfYA~qtf~d~~~grri~~gW~~~~~~ 229 (464)
++|....- ........+.|++|+||..+.+|++++. .+.+|+| ||||||+|.++ +|||||||||++|+.
T Consensus 224 ~~g~~~~~---~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~ 293 (445)
T TIGR01322 224 PQGLDASG---YDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEI 293 (445)
T ss_pred ccccCccc---ccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCcc
Confidence 76521100 0000112357999999877779987543 3689999 99999999987 799999999999988
Q ss_pred CCCCcCCCccccceecEEEEEEecCCceEEeechHHHHhcccCceeeeeEEEcCCceeeeccccceeEEEEEEEEeeecc
Q 012389 230 ESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLG 309 (464)
Q Consensus 230 ~~~~~~~gW~g~lslPRel~l~~~~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~f~~~~~~ 309 (464)
..++...+|+|+|||||+|.|+ +| +|+|+|++||++||.+... ..... ....+... ..+++|.++++..
T Consensus 294 ~~~~~~~~W~g~lslpR~l~l~--~g-~L~~~Pv~el~~lr~~~~~---~~~~~-~~~~~~~~-~~~~~l~~~~~~~--- 362 (445)
T TIGR01322 294 DYPTDRDGWAHCMTLPRELTLK--DG-KLVQTPLRELKALRTEEHI---NVFGD-QEHTLPGL-NGEFELILDLEKD--- 362 (445)
T ss_pred CCCCccCCcccccccCEEEEEe--CC-eEEEEEhHHHHHHhcCccc---ccccc-ccccccCC-CceEEEEEEecCC---
Confidence 7787789999999999999997 46 8999999999999986642 01111 11112111 1234443332210
Q ss_pred cCcccccccccCCCcccccccceEEEEEEcCCCCceEEEEEEeccCCCCCeeeEEeecCCCCCCCCccccccceEEeccc
Q 012389 310 SGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHGSKVPVLQ 389 (464)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~e~t~i~~~~~~~~~g~~~~~~vdr~~s~~~~~~~~~~~~~~~p~~~ 389 (464)
++ .++||.+ .+. ++.+.|.|+.+++ .+++||++++...... .. ..+++..
T Consensus 363 -------------~~-----~~~~l~~-~~~--~~~~~i~~~~~~~------~l~~dr~~~~~~~~~~-~~--~~~~~~~ 412 (445)
T TIGR01322 363 -------------SA-----FELGLAL-TNK--GEETLLTIDADEG------KVTLDRRSSGNLEDYG-GT--RSCPLPN 412 (445)
T ss_pred -------------Cc-----cEEEEEE-eCC--CCeEEEEEECcCC------EEEEEccCCCCcCCcc-ce--EEEEcCC
Confidence 00 2478887 442 4679999987653 5999998876321110 11 1234444
Q ss_pred CCeEEEEEEEecceEEEEEeCCeeEEEEEeecC
Q 012389 390 GEKLSMRILVDHSIVESFGQGGRTVITSRIYPT 422 (464)
Q Consensus 390 ~~~~~LrIfvD~S~vEvF~N~G~~~~T~rvyp~ 422 (464)
.+.++||||||+|+|||||||||.|||+||||.
T Consensus 413 ~~~~~l~i~vD~s~vEvFvn~G~~~~t~riyp~ 445 (445)
T TIGR01322 413 TKKVSLHIFIDKSSVEIFINDGEEVMTSRIFPD 445 (445)
T ss_pred CCeEEEEEEEECCEEEEEECCCEEEEEEeccCC
Confidence 578999999999999999999999999999995
No 4
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=100.00 E-value=4.3e-66 Score=538.82 Aligned_cols=365 Identities=47% Similarity=0.847 Sum_probs=266.2
Q ss_pred CCCCCccCCCCEEEeEEEEcCCCcEEEEEcccCCC-------CeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCC
Q 012389 1 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK-------SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGP 73 (464)
Q Consensus 1 l~P~~~~D~~Gv~SGsa~~~~~g~~~~~YTg~~~~-------~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~ 73 (464)
|.|+++||.+|||||||++ .++++++||||+... ..+.+++|.|+|+ ++|+|+++||||.++++...
T Consensus 58 L~P~~~~d~~g~~sGsav~-~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~-----~~w~k~~~~Pvi~~~p~~~~ 131 (437)
T smart00640 58 LAPDEWYDSNGVFSGSAVI-DPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLG-----GTWTKYPGNPVLVPPPGIGT 131 (437)
T ss_pred cCCCCcCCCCcEEEEEEEE-CCCceEEEEcCCcccccccCcccEEEEEEEECCCC-----CeeEECCCCcEEeCCCCCCC
Confidence 6799999999999999987 578899999998421 2333455555554 89999988999987666556
Q ss_pred CCeecCcceeecCCCcEEEEEEee-cCCceEEEEEEeCCCCCCeEcceeeec-CCCC-CceEeceEEEecccCccceeec
Q 012389 74 KDFRDPTTAWAGPDGKWRLTIGSK-IGKTGISLVYQTTDFKTYELLDEYLHA-VPGT-GMWECVDFYPVAINGSVGLDTS 150 (464)
Q Consensus 74 ~~~RDP~V~w~~~~g~~~mv~ga~-~~~~g~~~ly~S~Dl~~W~~~g~l~~~-~~~~-g~wECPdlf~l~~~~~~~l~~~ 150 (464)
.+||||+|+|+ ++++|||++|++ .+..|+++||+|+||++|++.+++... .... +||||||||+|++++
T Consensus 132 ~~fRDP~Vf~~-~~~~~~m~~g~~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~------- 203 (437)
T smart00640 132 EHFRDPKVFWY-DGDKWYMVIGASDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG------- 203 (437)
T ss_pred CCcCCCCccEE-CCCEEEEEEEEEecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC-------
Confidence 89999999765 446999999987 456799999999999999999998753 2334 499999999998654
Q ss_pred CCCCCeEEEEEEeeCCCCeeEEEEEEEeCCCCeeecCCCCcccccceeeccc-eeeecceeecCCCCcEEEEEeccCCCC
Q 012389 151 ATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDT 229 (464)
Q Consensus 151 ~~g~~~~~vl~~s~~~~~~~~y~iG~~d~~~~~f~~~~~~~d~~~~~~~D~G-dfYA~qtf~d~~~grri~~gW~~~~~~ 229 (464)
...+|||.+|..+.....|++|+|++. .+|+++.... ....+++|+| ||||||+|.+++.+||||||||++|+.
T Consensus 204 ---~~~~~vLi~s~~g~~~~~y~~G~~~g~-~~f~~~~~~~-~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~ 278 (437)
T smart00640 204 ---DTSKHVLKVSPQGGSGNYYFVGYFDGS-DQFTPDDPED-VGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDS 278 (437)
T ss_pred ---CceeEEEEECcCCCCccEEEEEEEcCc-eeEeECCccc-cCccceEecCCCceeeeeeecCCCCcEEEEEecCCCcc
Confidence 235889988877656679999999863 4798875431 1223589999 999999999974459999999999974
Q ss_pred -CCCCcCCCccccceecEEEEEEecCCceEEeechHHHHhcccCceeeeeEEEcCCceeeec--cccceeEEEEEEEEee
Q 012389 230 -ESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLD--IGVATQLDISAEFETE 306 (464)
Q Consensus 230 -~~~~~~~gW~g~lslPRel~l~~~~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~f~~~ 306 (464)
....+..+|+|+|||||||+|+..+| +|+|+|++||++||... ......+..+....+. ...+.++++.++|+..
T Consensus 279 ~~~~~p~~~W~g~~tlPRel~l~~~~g-~L~~~Pv~el~~lr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~ 356 (437)
T smart00640 279 YADDVPTKGWAGALSLPRELTLDKTGG-KLLQWPVEELESLRNVK-ELSNLTLKPGSVNELLGLTASGDAYEIELSFEVD 356 (437)
T ss_pred ccccCCCCCccccceeCeEEEEEecCC-EEEEeecHHHHhhhCcc-cccceeecCCceeeeecccCCccEEEEEEEEEeC
Confidence 22223389999999999999964456 89999999999999542 2333344322211111 1234455665555442
Q ss_pred ecccCcccccccccCCCcccccccceEEEEEEcCCCCceEEEEEEeccCCCCCeeeEEeecCCCCCCCC-ccccccceEE
Q 012389 307 LLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPD-VFKQVHGSKV 385 (464)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~e~t~i~~~~~~~~~g~~~~~~vdr~~s~~~~~-~~~~~~~~~~ 385 (464)
.. ++ +++||.++.++++++.+.|.|+.+++ .+++||++++.... .........+
T Consensus 357 ~~--------------~~-----~~~~l~~~~~~~~~~~~~i~~~~~~~------~l~vdR~~~~~~~~~~~~~~~~~~~ 411 (437)
T smart00640 357 SG--------------GA-----GPFGLLVLASEDLSEQTAVYFDVSKG------TLCLDRRSSGTSNDEVFKGVRGATV 411 (437)
T ss_pred CC--------------cc-----eeEEEEEEeCCCCCceEEEEEEcCCe------EEEEecCCCCCCcccccccceeeee
Confidence 00 00 24899999888877899999987643 69999976642110 0011111122
Q ss_pred ecccCCeEEEEEEEecceEEEEEeCC
Q 012389 386 PVLQGEKLSMRILVDHSIVESFGQGG 411 (464)
Q Consensus 386 p~~~~~~~~LrIfvD~S~vEvF~N~G 411 (464)
++.++++++||||||+|+||||||||
T Consensus 412 ~~~~~~~~~lri~vD~ssvEvf~ndG 437 (437)
T smart00640 412 PVDPGETLSLRILVDHSSVEIFANGG 437 (437)
T ss_pred ecCCCCeEEEEEEEeceEEEEEeCCC
Confidence 34345789999999999999999987
No 5
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=100.00 E-value=5.1e-53 Score=422.01 Aligned_cols=242 Identities=36% Similarity=0.730 Sum_probs=192.4
Q ss_pred CCCCCccCCCCEEEeEEEEcCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcC-CCceeeC-CCCCCCCCeec
Q 012389 1 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYP-GNPVLVP-PRHIGPKDFRD 78 (464)
Q Consensus 1 l~P~~~~D~~Gv~SGsa~~~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~-~~Pvi~~-p~~~~~~~~RD 78 (464)
|.|++++|++|||||||++ .++++++||||+.....+.|++|+|.|.+ ++|+|++ +||||.. |++ ...+|||
T Consensus 58 L~P~~~~d~~g~~SGs~~~-~~~~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p~~-~~~~~RD 131 (308)
T PF00251_consen 58 LPPDEEYDADGCFSGSAVV-DDDNLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPPPG-DTTDFRD 131 (308)
T ss_dssp E-SSSGGGTTEEEEEEEEE-ETTCEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSSTT-SCTSEEE
T ss_pred EcccccCCcCccCcceEEE-ECCEEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecccC-CCCcccc
Confidence 5799999999999999998 46699999999987668999999996654 9999998 4999995 445 6789999
Q ss_pred CcceeecCCCcEEEEEEeecCCceEEEEEEeCCCCCCeEcceeeecCC-CCCceEeceEEEecccCccceeecCCCCCeE
Q 012389 79 PTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVP-GTGMWECVDFYPVAINGSVGLDTSATGPGIK 157 (464)
Q Consensus 79 P~V~w~~~~g~~~mv~ga~~~~~g~~~ly~S~Dl~~W~~~g~l~~~~~-~~g~wECPdlf~l~~~~~~~l~~~~~g~~~~ 157 (464)
|+|+|+ ++++|+|++|++....|.+++|+|+||++|++.+.+..... ..+||||||||+|++++.. +...+
T Consensus 132 P~v~~~-~~~~~~m~~g~~~~~~g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~~-------~~~~~ 203 (308)
T PF00251_consen 132 PKVFWR-EDGRWYMLLGAGRDGRGCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGDG-------TGKWV 203 (308)
T ss_dssp EEEEEE-CTTEEEEEEEEEETTEEEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTSS-------SEEEE
T ss_pred CeEEEe-cCCEEEEEEeccccCcceEEEEEcCCcccCceeCcccccccccccccccceEEEECCcccc-------cceEE
Confidence 999887 56999999999977889999999999999999999886533 3449999999999976210 12345
Q ss_pred EEEEEee----CCCCeeEEEEEEEeCCCCeeecCCCCcccccceeeccc-eeeecceeecCCCCcEEEEEeccCCCCCC-
Q 012389 158 HVLKASL----DDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTES- 231 (464)
Q Consensus 158 ~vl~~s~----~~~~~~~y~iG~~d~~~~~f~~~~~~~d~~~~~~~D~G-dfYA~qtf~d~~~grri~~gW~~~~~~~~- 231 (464)
|||..+. .....+.|++|+|+....+|+++... .+++|+| ||||||+|.++.++||||||||+++++..
T Consensus 204 ~vl~~s~~g~~~~~~~~~Y~vG~~d~~~~~f~~~~~~-----~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~ 278 (308)
T PF00251_consen 204 WVLIFSPQGIEDNGHGTYYMVGDFDFDGGTFTPDDSS-----FQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNAD 278 (308)
T ss_dssp EEEEEEEESTTTTTTEEEEEEEEEETTTTEEEESSTT-----SEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHH
T ss_pred EEEEecccccccccccceEEeEEecCCCCeeeeeccc-----cceeccCccccCCchhcCCCcCcEEEEEEecCCCcccc
Confidence 6777776 34567899999998777899876211 4799999 89999999997445999999999998642
Q ss_pred CCcCCCccccceecEEEEEEecCCceEEeec
Q 012389 232 DDLEKGWASVQTIPRTVLYDNKTGSNVVQWP 262 (464)
Q Consensus 232 ~~~~~gW~g~lslPRel~l~~~~g~~L~q~P 262 (464)
.....+|+|+|||||||+|++ ++.+|+|+|
T Consensus 279 ~~~~~gW~g~lslPR~l~l~~-~~~~L~q~P 308 (308)
T PF00251_consen 279 DYPTYGWAGCLSLPRELTLKD-EGGRLYQKP 308 (308)
T ss_dssp HCHGHTEE-EE---EEEEEET-TSSSEEEEE
T ss_pred cCCCCCCccEEEeCEEEEEEE-CCCeEEEcC
Confidence 233689999999999999975 345999998
No 6
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=100.00 E-value=1e-47 Score=382.14 Aligned_cols=241 Identities=37% Similarity=0.674 Sum_probs=190.2
Q ss_pred CCCCCccCCCCEEEeEEEEcCCCcEEEEEcccCC---CCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCee
Q 012389 1 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTD---KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFR 77 (464)
Q Consensus 1 l~P~~~~D~~Gv~SGsa~~~~~g~~~~~YTg~~~---~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~R 77 (464)
|.|+.++|.+|||||||+++.+|+++|||||+.. ...+.|++|+|+|.+ ++|+|...+|++.++ .....+||
T Consensus 52 l~p~~~~d~~g~~sGsav~~~~g~~~~~YTg~~~~~~~~~~~~~lA~S~ddg----~~w~k~~~~~~~~~~-~~~~~~~R 126 (298)
T cd08996 52 LAPDDPYDSGGCFSGSAVVDDNGKLVLFYTGNVKLDGGRRQTQCLAYSTDDG----RTFTKYEGNPVIPPP-DGYTTHFR 126 (298)
T ss_pred cCCCCcccCCeEEeCeEEEcCCCcEEEEEeceeCCCCCceEEEEEEEEcCCC----CEEEECCCCceEcCC-CCCCCccc
Confidence 4577899999999999998544999999999874 457899999999543 899999888988633 33467999
Q ss_pred cCcceeecCCCcEEEEEEeec-CCceEEEEEEeCCCCCCeEcceeee-cCCCCCceEeceEEEecccCccceeecCCCCC
Q 012389 78 DPTTAWAGPDGKWRLTIGSKI-GKTGISLVYQTTDFKTYELLDEYLH-AVPGTGMWECVDFYPVAINGSVGLDTSATGPG 155 (464)
Q Consensus 78 DP~V~w~~~~g~~~mv~ga~~-~~~g~~~ly~S~Dl~~W~~~g~l~~-~~~~~g~wECPdlf~l~~~~~~~l~~~~~g~~ 155 (464)
||+|+|. +|+|||++|++. +..+++.+|+|+||++|++.+.+.. .....+|||||+||+|+++++.+|++|+++..
T Consensus 127 DP~V~~~--~g~~~m~~g~~~~~~~~~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~~~k~vL~~s~~~~~ 204 (298)
T cd08996 127 DPKVFWH--DGKWYMVLGAGTEDGTGRILLYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDVEGKWVLIFSPQGLE 204 (298)
T ss_pred CCeEEeE--CCEEEEEEEEEecCCCcEEEEEECCCCCCCEEcceecccCCCccceEeCCcEEEECCCCeEEEEECCCCCC
Confidence 9999443 589999999974 4568999999999999999988742 22223499999999998534445555544311
Q ss_pred eEEEEEEeeCCCCeeEEEEEEEeCCCCeeecCCCCcccccceeeccc-eeeecceeecCCCCcEEEEEeccCCCCCCCCc
Q 012389 156 IKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDL 234 (464)
Q Consensus 156 ~~~vl~~s~~~~~~~~y~iG~~d~~~~~f~~~~~~~d~~~~~~~D~G-dfYA~qtf~d~~~grri~~gW~~~~~~~~~~~ 234 (464)
..- ....+.|++|+|++. .|+++.. ..+++|+| +|||||+|.++ ++|+||||||++++...+..
T Consensus 205 ~~~-------~~~~~~y~~G~~~~~--~~~~~~~-----~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~ 269 (298)
T cd08996 205 PEG-------NGSGTGYLVGDFDGT--TFTFDHT-----EFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTP 269 (298)
T ss_pred CCC-------CccceEEEEEEEECC--CCeEecC-----CceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCC
Confidence 000 123568999999976 5554311 14789999 99999999997 79999999999999877888
Q ss_pred CCCccccceecEEEEEEecCCceEEeechHH
Q 012389 235 EKGWASVQTIPRTVLYDNKTGSNVVQWPVEE 265 (464)
Q Consensus 235 ~~gW~g~lslPRel~l~~~~g~~L~q~Pv~e 265 (464)
..+|+|+|||||||+|++ ++ +|.|+|++|
T Consensus 270 ~~~w~g~ls~pr~l~l~~-~~-~l~~~P~~e 298 (298)
T cd08996 270 EDGWAGCLTLPRELSLKD-GG-RLYQRPVRE 298 (298)
T ss_pred CCCceeeeEeCEEEEEcc-CC-EEEEEeCCC
Confidence 999999999999999985 33 899999976
No 7
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=100.00 E-value=2.1e-40 Score=326.83 Aligned_cols=216 Identities=22% Similarity=0.403 Sum_probs=169.3
Q ss_pred CCccCCCCEEEeEEEEcCCCcEEEEEcccCCC--CeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcc
Q 012389 4 DQWYDINGVWTGSATILPDGQIVMLYTGSTDK--SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTT 81 (464)
Q Consensus 4 ~~~~D~~Gv~SGsa~~~~~g~~~~~YTg~~~~--~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V 81 (464)
+..+|..|||||||++ .+|+++|||||+... ..+.|++|+|+|+ ++|+|.+.+||+.+++++...+||||+|
T Consensus 54 ~~~~d~~g~~sgs~~~-~~g~~~l~YTg~~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~~~~~~~~~rDP~V 127 (280)
T cd08995 54 GDEDDDDAIGTGSVIK-GEGTYHAFYTGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADGEGYEKNDWRDPFV 127 (280)
T ss_pred CCcccccCceEeEEEe-eCCEEEEEEEEECCCCCCcEEEEEEECCCC-----CccEECCCCeecCCccccccCCccCCcE
Confidence 5678999999999986 689999999998653 4578999999986 8999987789987555555568999999
Q ss_pred eeecCCCcEEEEEEeec-----CCceEEEEEEeCCCCCCeEcceeeecCCCCCceEeceEEEecccCccceeecCCCCCe
Q 012389 82 AWAGPDGKWRLTIGSKI-----GKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGI 156 (464)
Q Consensus 82 ~w~~~~g~~~mv~ga~~-----~~~g~~~ly~S~Dl~~W~~~g~l~~~~~~~g~wECPdlf~l~~~~~~~l~~~~~g~~~ 156 (464)
+|.+.+|+|||++|++. +..|++.+|+|+||++|++.+++... ....|||||++|+++ +
T Consensus 128 f~~~~~g~y~m~~g~~~~~~~~~~~g~i~~~~S~Dl~~W~~~~~~~~~-~~~~~~E~P~l~~~~--g------------- 191 (280)
T cd08995 128 FWNEEEGCYWMLLATRLLDGPYNRRGCIALFTSKDLKNWEYEEPFYAP-GLYFMPECPDLFKMG--D------------- 191 (280)
T ss_pred EEcCCCCeEEEEEEeccCCCCCCCCeEEEEEEeCCcCcceecCceecC-CCcceeecceEEEEC--C-------------
Confidence 55434699999999874 46789999999999999999877543 223499999999997 3
Q ss_pred EEEEEEeeCC-CCeeEEEEEEEeCCCCeeecCCCCcccccceeeccc-eeeecceeecCCCCcEEEEEeccCCCCCCCCc
Q 012389 157 KHVLKASLDD-TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDL 234 (464)
Q Consensus 157 ~~vl~~s~~~-~~~~~y~iG~~d~~~~~f~~~~~~~d~~~~~~~D~G-dfYA~qtf~d~~~grri~~gW~~~~~~~~~~~ 234 (464)
+|+|..+... .....|++|+.. .+.|.... ...+| | ||||||+|.++ |||||||||++++...++.
T Consensus 192 ~~~L~~s~~~~~~~~~Y~~~~~~--~g~~~~~~-------~~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~ 259 (280)
T cd08995 192 WWYLVYSEFSENRKTHYRVSKSP--FGPWRAPD-------DDTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDG 259 (280)
T ss_pred EEEEEEEeccCCCcEEEEEeCCC--CCCeEcCC-------cCccC-cccccceeEEEeC--CeEEEEEEecCCCCccccc
Confidence 4555554432 234678888622 23454321 13578 7 99999999985 9999999999999888888
Q ss_pred CCCccccceecEEEEEEecCC
Q 012389 235 EKGWASVQTIPRTVLYDNKTG 255 (464)
Q Consensus 235 ~~gW~g~lslPRel~l~~~~g 255 (464)
+.+|+|||| ||||.+.+ ||
T Consensus 260 ~~~w~~~l~-~~~~~~~~-~g 278 (280)
T cd08995 260 NWEWGGNLV-VHELIQNE-DG 278 (280)
T ss_pred CCccceEEE-eeEEEECC-CC
Confidence 999999999 67788764 56
No 8
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=99.96 E-value=6.5e-28 Score=236.27 Aligned_cols=197 Identities=24% Similarity=0.297 Sum_probs=150.1
Q ss_pred CCCCccCCCCEEEeEEEEcCCCcEEEEEcccCC--CCeeeEEEEEeCCCCCCCcceEEEcCCCcee---e--CCCCCCCC
Q 012389 2 VPDQWYDINGVWTGSATILPDGQIVMLYTGSTD--KSVQVQNLAYPADPSDPLLLDWVKYPGNPVL---V--PPRHIGPK 74 (464)
Q Consensus 2 ~P~~~~D~~Gv~SGsa~~~~~g~~~~~YTg~~~--~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi---~--~p~~~~~~ 74 (464)
.|...+|..|||+|+++.+.+|+++||||+... ...+.+++|+|+|+ ++|+|.+.+|++ . .+......
T Consensus 56 ~~~~~~~~~~~~~p~v~~~~dg~~~~~Yt~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~~~~~~~ 130 (276)
T cd08979 56 GPPGSFDDGGVWTPSVVRDPDGTYRMFYTGYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNPGPWDDH 130 (276)
T ss_pred CCCCchhcCCeEcceEEEcCCCeEEEEEecccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCCCCcccc
Confidence 467889999999999987544999999999873 45688999999996 899998767654 2 22223456
Q ss_pred CeecCcceeecCCCcEEEEEEeec-CCceEEEEEEeCCCCCCeEcceee--ecCCCCCceEeceEEEecccCccceeecC
Q 012389 75 DFRDPTTAWAGPDGKWRLTIGSKI-GKTGISLVYQTTDFKTYELLDEYL--HAVPGTGMWECVDFYPVAINGSVGLDTSA 151 (464)
Q Consensus 75 ~~RDP~V~w~~~~g~~~mv~ga~~-~~~g~~~ly~S~Dl~~W~~~g~l~--~~~~~~g~wECPdlf~l~~~~~~~l~~~~ 151 (464)
++|||+|++.+.+|+|||++++.. +..+.+.+|+|+||++|++.+.+. .......+||||++|+++ +
T Consensus 131 ~~~dP~v~~~~~~g~y~m~~~~~~~~~~~~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~--g-------- 200 (276)
T cd08979 131 AWRDPAVVRDEEGGGWRMYYGARDADERGAIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKID--G-------- 200 (276)
T ss_pred cccccEEEEECCCCEEEEEEEeEccCCCcEEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEEC--C--------
Confidence 899999955422389999999874 455789999999999999988763 222223499999999996 2
Q ss_pred CCCCeEEEEEEeeCC-CCeeEEEEEEEeCCCCeeecCCCCcccccceeeccc-eeeecceeecCCCCcEEEEEeccCC
Q 012389 152 TGPGIKHVLKASLDD-TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINET 227 (464)
Q Consensus 152 ~g~~~~~vl~~s~~~-~~~~~y~iG~~d~~~~~f~~~~~~~d~~~~~~~D~G-dfYA~qtf~d~~~grri~~gW~~~~ 227 (464)
+|+|..+... .....|.+|.++.. .|.+.. ...+|.| +|||+|++.+..++|++++|||.++
T Consensus 201 -----~~~l~~~~~~~~~~~~y~vg~~~~~--~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 201 -----RWYLLYSGRNEDAKTGYRVGTALFG--PGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred -----EEEEEEEecCccCCccEEEEecccC--Cccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 6777666543 34578999987654 455431 2468888 9999999987546999999999986
No 9
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=99.91 E-value=4.7e-23 Score=202.26 Aligned_cols=228 Identities=25% Similarity=0.355 Sum_probs=158.3
Q ss_pred CCCccCCCCEEEeEEEEcCCCcEEEEEcccCC-CCeeeEEEEEeCCCCCCCcceEEEcCCCceeeC-CCCCCCCCeecCc
Q 012389 3 PDQWYDINGVWTGSATILPDGQIVMLYTGSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP-PRHIGPKDFRDPT 80 (464)
Q Consensus 3 P~~~~D~~Gv~SGsa~~~~~g~~~~~YTg~~~-~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~-p~~~~~~~~RDP~ 80 (464)
|..+++..+||+|+++...+|+++||||+... ...+.+++|+|+|.. ..|++...+||+.. +......++|||+
T Consensus 51 ~~~~~~~~~~wap~v~~~~~g~~~l~yt~~~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dp~ 126 (286)
T cd08772 51 RGGPKDSGGIWAPSIVYIENGKFYLYYTDVSFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNPPAADVSNFRDPF 126 (286)
T ss_pred cCCCCCCCcEecceEEEcCCCCEEEEEEeecCCCCceeEEEEEcCCCC----CCCccccccccccCCCCccccccccCCe
Confidence 67788899999999987544999999999863 346789999999863 45666655566543 2223456899999
Q ss_pred ceeecCCCcEEEEEEeec-CCceEEEEEEeCCCCCCeEcceee--ecCCCCCceEeceEEEecccCccceeecCCCCCeE
Q 012389 81 TAWAGPDGKWRLTIGSKI-GKTGISLVYQTTDFKTYELLDEYL--HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIK 157 (464)
Q Consensus 81 V~w~~~~g~~~mv~ga~~-~~~g~~~ly~S~Dl~~W~~~g~l~--~~~~~~g~wECPdlf~l~~~~~~~l~~~~~g~~~~ 157 (464)
| |..++|+|||++++.. ...+.+.+++|+|+.+|++.+... ......+++|||++|+++ ++.+|++|..+...
T Consensus 127 v-~~d~dG~~y~~~~~~~~~~~~~i~~~~s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~--g~~yL~~s~~~~~~- 202 (286)
T cd08772 127 V-FEDDDGKWYLVFGSGDHHNFGGIFLYESDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKN--GKYYLFYSINGTGR- 202 (286)
T ss_pred E-EEcCCCCEEEEEccccCCCCCeEEEEEcCCCCCcccccceeeEeeccCCCceeccEEEEEC--CEEEEEEEcCCCcC-
Confidence 9 5445699999998763 235679999999999999877642 222234599999999996 43444444332100
Q ss_pred EEEEEeeCCCCeeEEEEEEEeCCCCeeecCCCCc-ccccceeeccc-eeeecceeecCCCCcEEEEEeccCCCCCCCCcC
Q 012389 158 HVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEE-DVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLE 235 (464)
Q Consensus 158 ~vl~~s~~~~~~~~y~iG~~d~~~~~f~~~~~~~-d~~~~~~~D~G-dfYA~qtf~d~~~grri~~gW~~~~~~~~~~~~ 235 (464)
........|++++.. .+.|++..... -.-.....|.+ ++||++.|.++ +||++|++|+.+++.... ..
T Consensus 203 ------~~~~y~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~ 272 (286)
T cd08772 203 ------VDSTYSIGYARSESD--TGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PT 272 (286)
T ss_pred ------CCCCcceEEEEccCC--CCCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-cc
Confidence 011234567777643 34665442110 00001335666 89999999987 799999999999875333 56
Q ss_pred CCccccceecEEE
Q 012389 236 KGWASVQTIPRTV 248 (464)
Q Consensus 236 ~gW~g~lslPRel 248 (464)
.+|.++|+|||++
T Consensus 273 ~~~~~~~~~~r~~ 285 (286)
T cd08772 273 YGWGRSLAIPRLL 285 (286)
T ss_pred CCCcccccccccc
Confidence 7999999999986
No 10
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=99.81 E-value=5.1e-19 Score=177.19 Aligned_cols=144 Identities=24% Similarity=0.272 Sum_probs=98.1
Q ss_pred CCCCCccCCCCEEEeEEEEcCCCcEEEEEcccCC----CCeeeEEEEEeCCCCCCCcceEEEcC--CCceeeCC------
Q 012389 1 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYP--GNPVLVPP------ 68 (464)
Q Consensus 1 l~P~~~~D~~Gv~SGsa~~~~~g~~~~~YTg~~~----~~~~~q~lA~S~D~gd~~l~~w~k~~--~~Pvi~~p------ 68 (464)
|.|++.+|.+|||||||++..+|+++|||||+.+ .....|++|.+.+.. +..|.+.. ..+++.+.
T Consensus 60 l~p~~~~d~~g~wSGsa~~~~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~---~~v~~~~~~~~~~lf~~Dg~~Yqt 136 (349)
T cd08997 60 VFPDGLSPGSREWSGSATLDDDGTVQLFYTAVGRKGEPQPTFTQRLALARGTL---SVVNLSGFEDHHELFEPDGDLYQT 136 (349)
T ss_pred cCCCCcccCCCeEcceEEEeCCCeEEEEEeccccCCCCCCCceEEEEEEECCC---cceEecccCccceeeeCCCceEEe
Confidence 4689999999999999987667999999999863 235677777776531 12333221 12344321
Q ss_pred --------CCCCCCCeecCcceeecC-CCcEEEEEEeec-CC---------------------------ceEEEE--EEe
Q 012389 69 --------RHIGPKDFRDPTTAWAGP-DGKWRLTIGSKI-GK---------------------------TGISLV--YQT 109 (464)
Q Consensus 69 --------~~~~~~~~RDP~V~w~~~-~g~~~mv~ga~~-~~---------------------------~g~~~l--y~S 109 (464)
+.....+||||+| |+.+ +|+|||+++|.. .. .|+|.| ++|
T Consensus 137 ~~q~~~~~~~~~~~~fRDP~v-f~d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s 215 (349)
T cd08997 137 DQQYEGTGAQGDIKAFRDPFV-FEDPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKN 215 (349)
T ss_pred ccccccccccCccCcccCCEE-EecCCCCcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecC
Confidence 1112568999999 6533 689999999863 22 244444 467
Q ss_pred CCCCCCeEcceeeecCCCCCceEeceEEEecccCccceeec
Q 012389 110 TDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTS 150 (464)
Q Consensus 110 ~Dl~~W~~~g~l~~~~~~~g~wECPdlf~l~~~~~~~l~~~ 150 (464)
+||.+|++.++|..+......||||++|+++ |+.+|++|
T Consensus 216 ~dl~~W~~~~PL~~a~~v~d~~E~P~v~~~~--gk~yL~~s 254 (349)
T cd08997 216 DDLTEWKLLPPLLEANGVNDELERPHVVFHN--GKYYLFTI 254 (349)
T ss_pred CCCCCcEEcCccccCCCcCCceEcceEEEEC--CEEEEEEe
Confidence 8999999999997643223479999999997 33444444
No 11
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=99.67 E-value=4.8e-16 Score=154.14 Aligned_cols=133 Identities=18% Similarity=0.268 Sum_probs=101.7
Q ss_pred cCCCCEEEeEEEEcCCCcEEEEEcccCCC---CeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCccee
Q 012389 7 YDINGVWTGSATILPDGQIVMLYTGSTDK---SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAW 83 (464)
Q Consensus 7 ~D~~Gv~SGsa~~~~~g~~~~~YTg~~~~---~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w 83 (464)
||..++..++++.+.+|+++|+|+|+... ..+.+++|+|+|.. .+|+|.+..||+ . +. ...++|||+| |
T Consensus 141 ~~~~~~~~p~v~~~~~g~~~m~y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~-~-~~-~~~~~~dP~V-~ 212 (291)
T cd08994 141 WDNLITSNPAVTRRPDGSYLLVYKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI-E-PG-DNGNTEDPFV-W 212 (291)
T ss_pred cccccccCCCeEEeCCCCEEEEEeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc-c-CC-CCCceeCceE-E
Confidence 78888999999875589999999998643 35778999998862 479998666665 2 22 3568999999 8
Q ss_pred ecCCCcEEEEEEeec----CCceEEEEEEeCCCCCCeEcceeee----c-CC----CCCceEeceEE-EecccCccceee
Q 012389 84 AGPDGKWRLTIGSKI----GKTGISLVYQTTDFKTYELLDEYLH----A-VP----GTGMWECVDFY-PVAINGSVGLDT 149 (464)
Q Consensus 84 ~~~~g~~~mv~ga~~----~~~g~~~ly~S~Dl~~W~~~g~l~~----~-~~----~~g~wECPdlf-~l~~~~~~~l~~ 149 (464)
+ .+|+|||++++.. +..+.+.+|+|+|+++|++.+.+.. . .. ...|||||++| ..+ |+.+|++
T Consensus 213 ~-~~g~yym~~~~~~~~~~~~~~~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~--g~~~~l~ 289 (291)
T cd08994 213 Y-DKGQFHMIVKDMLGYVTGEKGGGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED--GKPTYLF 289 (291)
T ss_pred E-eCCEEEEEEeecccCcCCCCceEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC--CCEEEEe
Confidence 6 5699999999874 3567899999999999999987731 1 11 23499999999 775 4455555
Q ss_pred c
Q 012389 150 S 150 (464)
Q Consensus 150 ~ 150 (464)
|
T Consensus 290 ~ 290 (291)
T cd08994 290 F 290 (291)
T ss_pred c
Confidence 4
No 12
>PF08244 Glyco_hydro_32C: Glycosyl hydrolases family 32 C terminal; InterPro: IPR013189 This domain corresponds to the C-terminal domain of glycosyl hydrolase family 32. It forms a beta sandwich module [].; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 1W2T_C 1UYP_A 3UGG_A 3UGH_B 3UGF_B ....
Probab=99.37 E-value=3.8e-12 Score=102.89 Aligned_cols=73 Identities=33% Similarity=0.465 Sum_probs=54.1
Q ss_pred ceEEEEEEcCCCCceEEEEEEeccCCCCCeeeEEeecCCCCCCCCccccccc---eEEeccc-CCeEEEEEEEecceEEE
Q 012389 331 PFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHG---SKVPVLQ-GEKLSMRILVDHSIVES 406 (464)
Q Consensus 331 ~~gl~v~~~~~~~e~t~i~~~~~~~~~g~~~~~~vdr~~s~~~~~~~~~~~~---~~~p~~~-~~~~~LrIfvD~S~vEv 406 (464)
++||.|+++++.++.|.|.|+...+ .+++||++|+... ....++ ...++.. ++.++||||||+|+|||
T Consensus 10 ~~g~~l~~s~~~~e~~~i~~d~~~~------~l~vDR~~s~~~~--~~~~~~~~~~~~~~~~~~~~l~L~i~vD~SsvEi 81 (86)
T PF08244_consen 10 SFGLRLRASNDGGEETSIGYDPANG------TLTVDRTNSGIND--FSEEFGTFVRSAPLDLGDKILKLRIFVDRSSVEI 81 (86)
T ss_dssp EEEEEEEEETTSSSEEEEEEETTTT------EEEEEETTSSTTS--CCCEEEEEEEEEETTTTESEEEEEEEEETTEEEE
T ss_pred CeEEEEEECCCccEEEEEEEECCCC------EEEEeCCCCcccc--cccccCcceEEeeccCCCCcEEEEEEEeCCEEEE
Confidence 5899999888889999999986643 6999999987321 111122 1233322 45689999999999999
Q ss_pred EEeCC
Q 012389 407 FGQGG 411 (464)
Q Consensus 407 F~N~G 411 (464)
|+|||
T Consensus 82 FvNdG 86 (86)
T PF08244_consen 82 FVNDG 86 (86)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 99987
No 13
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.13 E-value=5.5e-10 Score=109.55 Aligned_cols=100 Identities=22% Similarity=0.321 Sum_probs=77.9
Q ss_pred EEeEEEEcCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCC--CCCCCCCeecCcceeecCCCcE
Q 012389 13 WTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKW 90 (464)
Q Consensus 13 ~SGsa~~~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p--~~~~~~~~RDP~V~w~~~~g~~ 90 (464)
|...++. .+|+++|+|++........+++|+|+|+ +||++.+ +|+|.++ ...+..+++||.| .+ .+|+|
T Consensus 1 ~nP~v~~-~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v-~~-~~g~y 71 (268)
T cd08993 1 FNPAVVY-DNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRI-VK-IDDTY 71 (268)
T ss_pred CcCeEEE-ECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEE-EE-ECCEE
Confidence 3456665 7999999999876555678999999996 9999975 5555442 2345678999999 55 57899
Q ss_pred EEEEEeec--CCceEEEEEEeCCCCCCeEccee
Q 012389 91 RLTIGSKI--GKTGISLVYQTTDFKTYELLDEY 121 (464)
Q Consensus 91 ~mv~ga~~--~~~g~~~ly~S~Dl~~W~~~g~l 121 (464)
||++++.. ....++.+++|+|+.+|++.+..
T Consensus 72 ~m~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~~ 104 (268)
T cd08993 72 YITYAARPNAPNGTRIGLATTKDFITFERLGTS 104 (268)
T ss_pred EEEEEccCCCCCCcEEEEEEeCCcceEEEeccc
Confidence 99998864 34568999999999999998754
No 14
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.07 E-value=1.2e-09 Score=108.74 Aligned_cols=113 Identities=21% Similarity=0.257 Sum_probs=85.2
Q ss_pred cCCCCEEEeEEEEcCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeecC
Q 012389 7 YDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGP 86 (464)
Q Consensus 7 ~D~~Gv~SGsa~~~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~ 86 (464)
.+..++++++++.+.+|+++|||++... ...+++|.|+|+ .+|++. .+++.. ...++|+| |+ .
T Consensus 130 ~~~~~~iD~~vf~~~dg~~yl~y~~~~~--~~~~~~a~s~D~-----~~w~~~--~~~i~~------~~~EgP~v-~k-~ 192 (294)
T cd08984 130 LDSDRVIDACVFKLPDGRWRMWYKDERR--GSTTYAADSEDL-----YHWTVE--GPVLGD------RPHEGPNV-FR-W 192 (294)
T ss_pred cCCCCcEEeEEEEeCCCEEEEEEECCCC--CeEEEEEECCCC-----CEEEeC--CccccC------CCCCCCCe-eE-E
Confidence 4567899999987666999999998643 245689999986 899985 356542 13489999 65 5
Q ss_pred CCcEEEEEEeecCCceEEEEEEeCCCCCCeEcceeeecCC---C-CCceEeceEEEec
Q 012389 87 DGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVP---G-TGMWECVDFYPVA 140 (464)
Q Consensus 87 ~g~~~mv~ga~~~~~g~~~ly~S~Dl~~W~~~g~l~~~~~---~-~g~wECPdlf~l~ 140 (464)
+|.|||+++.. .| +.+|+|+|+.+|++.+.++.... . ..+++||++|+.+
T Consensus 193 ~g~yym~~~~~---~g-~~~~~S~D~~~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 193 KGYYWMIIDEW---KG-LGVYRSKDAENWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred CCEEEEEEcCC---ce-EEEEECCChhhcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 78999997542 24 77999999999999997764321 1 2278999999886
No 15
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.04 E-value=1.6e-09 Score=106.18 Aligned_cols=104 Identities=14% Similarity=0.119 Sum_probs=81.0
Q ss_pred CCccCCCCEEEeEEEEcCCCcEEEEEcccCC-CCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcce
Q 012389 4 DQWYDINGVWTGSATILPDGQIVMLYTGSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 82 (464)
Q Consensus 4 ~~~~D~~Gv~SGsa~~~~~g~~~~~YTg~~~-~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~ 82 (464)
+..++..||+.++++. .+|+++|+||+... ...+.+++|.|+|+ ++|+|.. . ++ .+ ..||+++
T Consensus 51 ~~~~~~~gv~dP~v~~-~~g~y~m~Yta~~~~~~~~~i~lA~S~D~-----~~W~~~~-~-~~-~~------~~~d~~~- 114 (268)
T cd08993 51 EDGFEEGGVEDPRIVK-IDDTYYITYAARPNAPNGTRIGLATTKDF-----ITFERLG-T-SL-VP------NNRDGIL- 114 (268)
T ss_pred CCcccccCccCcEEEE-ECCEEEEEEEccCCCCCCcEEEEEEeCCc-----ceEEEec-c-cC-CC------CCCCEEE-
Confidence 6788999999999986 79999999999863 34577999999996 8999973 2 11 11 3478888
Q ss_pred eec-CCCcEEEEEEeec---CCceEEEEEEeCCCCCCeEcceeee
Q 012389 83 WAG-PDGKWRLTIGSKI---GKTGISLVYQTTDFKTYELLDEYLH 123 (464)
Q Consensus 83 w~~-~~g~~~mv~ga~~---~~~g~~~ly~S~Dl~~W~~~g~l~~ 123 (464)
|.+ .+|+|+|++.... +..+.+.+++|+||.+|+..+.++.
T Consensus 115 ~p~~~~g~y~m~~r~~~~~~~~~~~I~lA~S~Dl~~W~~~~~~~~ 159 (268)
T cd08993 115 FPEKINGKYVMLHRPFEYGGTSPPDMWLSFSPDLVHWGNHRFVLS 159 (268)
T ss_pred eeEEECCEEEEEEccccCCCCCCCcEEEEECCCcCccCCCeEEec
Confidence 532 4799999986432 3467899999999999998877654
No 16
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.92 E-value=1.5e-08 Score=99.71 Aligned_cols=126 Identities=16% Similarity=0.151 Sum_probs=87.1
Q ss_pred CccCCCCEEEeEEEEcCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceee
Q 012389 5 QWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWA 84 (464)
Q Consensus 5 ~~~D~~Gv~SGsa~~~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~ 84 (464)
..++.+++|.++++. .+|+++||||+. +.+++|+|+|.. -.|++..++|++.... .....+||.| |.
T Consensus 59 ~~~~~~~~wAP~v~~-~~g~yy~yys~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~~--~~~~~iDp~v-f~ 125 (275)
T cd09004 59 VSWANRAAWAPSVIE-RNGKYYFYFSAN-----GGIGVAVADSPL----GPFKDALGKPLIDKFT--FGAQPIDPDV-FI 125 (275)
T ss_pred CcccCCCcCCCeEEE-ECCEEEEEEEcC-----CcEEEEEeCCCC----CCCCCCCCCccccCCc--CCCCccCCCe-EE
Confidence 456788999999986 689999999986 457899998742 3677744578876432 2357899999 54
Q ss_pred cCCCcEEEEEEeecCCceEEEEE-EeCCCCCCeEcceeeecCCCCCceEeceEEEecccCccceeec
Q 012389 85 GPDGKWRLTIGSKIGKTGISLVY-QTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTS 150 (464)
Q Consensus 85 ~~~g~~~mv~ga~~~~~g~~~ly-~S~Dl~~W~~~g~l~~~~~~~g~wECPdlf~l~~~~~~~l~~~ 150 (464)
+++|+|||++++. +.+.++ -|+|+.+|........ .....+.|||.+|+.+ |..+|++|
T Consensus 126 d~dG~~yl~~~~~----~~~~i~~l~~d~~~~~~~~~~~~-~~~~~~~EgP~i~k~~--G~yyl~ys 185 (275)
T cd09004 126 DDDGQAYLYWGGW----GHCNVAKLNEDMISFDGERDGSE-ITPKNYFEGPFMFKRN--GIYYLMWS 185 (275)
T ss_pred CCCCCEEEEEcCc----CCEEEEEECCCcccccCcceeee-ccCCCceecceEEEEC--CEEEEEEE
Confidence 4689999999863 123333 4788988875443321 1122489999999986 43444444
No 17
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=98.91 E-value=3.6e-08 Score=97.79 Aligned_cols=129 Identities=18% Similarity=0.176 Sum_probs=95.2
Q ss_pred CccCCCCEEEeEEEEcCCCcEEEEEcccCC-------CCeeeEEEEEeCCCCCCCcceEEEcCCCceeeC-CCCCCCCCe
Q 012389 5 QWYDINGVWTGSATILPDGQIVMLYTGSTD-------KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP-PRHIGPKDF 76 (464)
Q Consensus 5 ~~~D~~Gv~SGsa~~~~~g~~~~~YTg~~~-------~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~-p~~~~~~~~ 76 (464)
.+||..++++++++. .+|+++||||+... ...+.+++|+|++.. .+|++. .+||+.+ +.+++..++
T Consensus 73 ~~wd~~~~~~P~vi~-~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~----g~w~~~-~~pvl~~~~~~~~~~~~ 146 (291)
T cd08994 73 GYWDARTTHNPTIKR-FDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLD----GPWKRS-DQPILEPRPGGWDNLIT 146 (291)
T ss_pred CcccCCCccCCeEEE-ECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCC----CCcEEC-CCceecCCCCccccccc
Confidence 678999999999986 68999999999863 235678899998731 589997 5899975 333455678
Q ss_pred ecCcceeecCCCcEEEEEEeec-C---CceEEEEEEeCCC-CCCeEcceee-ecCCCCCceEeceEEEec
Q 012389 77 RDPTTAWAGPDGKWRLTIGSKI-G---KTGISLVYQTTDF-KTYELLDEYL-HAVPGTGMWECVDFYPVA 140 (464)
Q Consensus 77 RDP~V~w~~~~g~~~mv~ga~~-~---~~g~~~ly~S~Dl-~~W~~~g~l~-~~~~~~g~wECPdlf~l~ 140 (464)
.||+| ++.++|+|||++.+.. + ....+.+..|+|. ..|+..+... ......+..|=|.+|+-+
T Consensus 147 ~~p~v-~~~~~g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~V~~~~ 215 (291)
T cd08994 147 SNPAV-TRRPDGSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPFVWYDK 215 (291)
T ss_pred cCCCe-EEeCCCCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCceEEEeC
Confidence 99999 6544899999998752 1 3456788999997 6899876322 111122368889888875
No 18
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.82 E-value=1.3e-07 Score=93.28 Aligned_cols=125 Identities=18% Similarity=0.172 Sum_probs=82.0
Q ss_pred cCCCCEEEeEEEEcCCCcEEEEEcccCCC-CeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeec
Q 012389 7 YDINGVWTGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAG 85 (464)
Q Consensus 7 ~D~~Gv~SGsa~~~~~g~~~~~YTg~~~~-~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~ 85 (464)
.+..++|.+.++. .+|+++|+|++.... ..+.+++|+|+|.. -.|++... +++..+.+ ....+||.| +..
T Consensus 57 ~~~~~~waP~v~~-~~g~y~~~y~~~~~~~~~~~i~~a~s~~p~----g~~~~~~~-~~~~~~~~--~~~~~Dp~v-~~d 127 (287)
T cd08999 57 WTGGDFWAPDVSY-VNGKYVLYYSARDKGSGGQCIGVATADSPL----GPFTDHGK-PPLCCPEG--EGGAIDPSF-FTD 127 (287)
T ss_pred ccCCCccCceEEE-ECCEEEEEEEeecCCCCCEEEEEEECCCCC----CCCccCCc-ceEecCCC--CCCccCCCe-EEC
Confidence 4566788888875 689999999998753 34667889987742 36887643 33332222 356899999 554
Q ss_pred CCCcEEEEEEeecCCce---EEEEEE-eCCCCCCeEcce-eeecC-C-CCCceEeceEEEec
Q 012389 86 PDGKWRLTIGSKIGKTG---ISLVYQ-TTDFKTYELLDE-YLHAV-P-GTGMWECVDFYPVA 140 (464)
Q Consensus 86 ~~g~~~mv~ga~~~~~g---~~~ly~-S~Dl~~W~~~g~-l~~~~-~-~~g~wECPdlf~l~ 140 (464)
++|+|||++++.....+ .+.+.+ |+|+.+|..... +.... . ...++|||.+|+.+
T Consensus 128 ~dG~~Yl~~~~~~~~~~~~~~i~~~~ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~ 189 (287)
T cd08999 128 TDGKRYLVWKSDGNSIGKPTPIYLQELSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG 189 (287)
T ss_pred CCCCEEEEEeccCCCCCCCceEEEEEeCCCCccccCCcEeeecccccccCCceEeeEEEEEC
Confidence 58999999987532111 233333 689988865433 22211 1 22389999999985
No 19
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=98.77 E-value=2.2e-08 Score=100.20 Aligned_cols=105 Identities=22% Similarity=0.289 Sum_probs=81.6
Q ss_pred CCCEEEeEEEEcCCCc--EEEEEcccCCCCee-eEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeec
Q 012389 9 INGVWTGSATILPDGQ--IVMLYTGSTDKSVQ-VQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAG 85 (464)
Q Consensus 9 ~~Gv~SGsa~~~~~g~--~~~~YTg~~~~~~~-~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~ 85 (464)
...||...|++ .+|+ ++++|.+....... .+++|.|.|| +||++. .+||+.|...++..++-||.|+..
T Consensus 29 ~~~vfNpgai~-~~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~~~~e~~GvEDPRVt~i- 100 (312)
T PF04041_consen 29 PNAVFNPGAIV-FDGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPDTDYEEWGVEDPRVTKI- 100 (312)
T ss_dssp SSEEEEEEEEE-ETTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE-SSTTHTEEEEEEEEEE-
T ss_pred cceEEcCcEEE-ECCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccCCCCcccCccceeEEEE-
Confidence 45699999986 4655 89999888655434 7999999997 999986 479998755556678999999654
Q ss_pred CCCcEEEEEEeecCCceEEEEEEeCCCCCCeEcceee
Q 012389 86 PDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 122 (464)
Q Consensus 86 ~~g~~~mv~ga~~~~~g~~~ly~S~Dl~~W~~~g~l~ 122 (464)
+++|||++.+......++.+.+|+|+.+|+..+..+
T Consensus 101 -~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~~~ 136 (312)
T PF04041_consen 101 -DDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGKIF 136 (312)
T ss_dssp -TTEEEEEEEEEESSSEEEEEEEESSSSSEEEEECTT
T ss_pred -CCEEEEEEEEecCCCcccceEEccchHhhEEecccc
Confidence 679999998876556688899999999999998654
No 20
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=98.77 E-value=7e-08 Score=94.35 Aligned_cols=125 Identities=15% Similarity=0.218 Sum_probs=90.1
Q ss_pred cCCCCEEEeEEEEcCCCcEEEEEcccCCCC----eeeEEEEEeCCCCCCCcceEEEcCCCce-eeCCCCCCCCCeecCcc
Q 012389 7 YDINGVWTGSATILPDGQIVMLYTGSTDKS----VQVQNLAYPADPSDPLLLDWVKYPGNPV-LVPPRHIGPKDFRDPTT 81 (464)
Q Consensus 7 ~D~~Gv~SGsa~~~~~g~~~~~YTg~~~~~----~~~q~lA~S~D~gd~~l~~w~k~~~~Pv-i~~p~~~~~~~~RDP~V 81 (464)
||...|+.+.+++ |+++|||+++.... ....++|+|+|+ ++|++.+ .++ ..+++..+...+.||.|
T Consensus 1 wd~~~~~~~~~~~---g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~-----~~w~~~~-~~l~~~~~~~~~~~~~~~p~v 71 (276)
T cd08979 1 WDSWIVFNPAVVV---GKYHLFYLAAPRGGGDGNTSRIGAASSDDG-----TWWTRPP-APLPPGPPGSFDDGGVWTPSV 71 (276)
T ss_pred CCcccccCCceEe---eeEEEEEEccCcCcCCCCcceeEEEEcCCC-----CccEECC-cCccCCCCCchhcCCeEcceE
Confidence 5778899999874 99999999987542 355689999986 9999974 344 22333445678899999
Q ss_pred eeecCCCcEEEEEEeec---CCceEEEEEEeCCCCCCeEcceee-----e-c-CC--CCCceEeceEEEecc
Q 012389 82 AWAGPDGKWRLTIGSKI---GKTGISLVYQTTDFKTYELLDEYL-----H-A-VP--GTGMWECVDFYPVAI 141 (464)
Q Consensus 82 ~w~~~~g~~~mv~ga~~---~~~g~~~ly~S~Dl~~W~~~g~l~-----~-~-~~--~~g~wECPdlf~l~~ 141 (464)
+ +..+|+|+|++.+.. .....+.+..|+|+.+|+..+... . . .. ....+..|.+|+.++
T Consensus 72 ~-~~~dg~~~~~Yt~~~~~~~~~~~i~~A~S~D~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~ 142 (276)
T cd08979 72 V-RDPDGTYRMFYTGYDRPKGAVQRIGLATSKDLIHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEE 142 (276)
T ss_pred E-EcCCCeEEEEEecccCCCCCcceEEEEECCCCCceEECCCCcceeeeecCCCCCcccccccccEEEEECC
Confidence 4 434489999988753 334478899999999999977543 1 1 11 123678999998863
No 21
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=98.72 E-value=2.1e-07 Score=91.56 Aligned_cols=132 Identities=14% Similarity=0.162 Sum_probs=90.2
Q ss_pred cCCCCEEEeEEEEcCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeecC
Q 012389 7 YDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGP 86 (464)
Q Consensus 7 ~D~~Gv~SGsa~~~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~ 86 (464)
++..++|.++++. .+|+++|||++......+.+++|+|+|.. -.|+.....|++...+ ......||.| +..+
T Consensus 59 ~~~~~~wAP~i~~-~~g~yy~yy~~~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~~--~~~~~iDp~v-f~d~ 130 (274)
T cd08990 59 WAKGQAWAPDVVE-KNGKYYLYFPARDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTPS--GGWYSIDPAV-FIDD 130 (274)
T ss_pred cccCCcCcCeEEE-ECCEEEEEEEeecCCCceEEEEEEeCCCC----CCCCCCCCccccccCC--CCCCccCCcE-EECC
Confidence 7788999999986 79999999999764345668899998742 3688765455554221 2356789999 5456
Q ss_pred CCcEEEEEEeecCCceEEEEEEeCCCCCCeEcceeeec-----CCCCCceEeceEEEecccCccceeecC
Q 012389 87 DGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHA-----VPGTGMWECVDFYPVAINGSVGLDTSA 151 (464)
Q Consensus 87 ~g~~~mv~ga~~~~~g~~~ly~S~Dl~~W~~~g~l~~~-----~~~~g~wECPdlf~l~~~~~~~l~~~~ 151 (464)
+|++||++++. .+..+.--|+|+.+|+.....+.. ....+..|+|.+|+.+ |..+|++|.
T Consensus 131 dG~~yl~~~~~---~~~~~~~l~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--G~YYl~yS~ 195 (274)
T cd08990 131 DGQAYLYWGGG---LGLRVAKLKPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN--GTYYLSYST 195 (274)
T ss_pred CCCEEEEECCc---CCEEEEEeCccccccCCCcEEEEeccccCCCCCCcccceeEEEEC--CEEEEEEEC
Confidence 79999999864 233334457899999765543321 1123478999999986 444444443
No 22
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=98.63 E-value=7.9e-07 Score=86.55 Aligned_cols=127 Identities=20% Similarity=0.176 Sum_probs=83.4
Q ss_pred CCCccCCCCEEEeEEEEcCCCcEEEEEcccCCC-CeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcc
Q 012389 3 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTT 81 (464)
Q Consensus 3 P~~~~D~~Gv~SGsa~~~~~g~~~~~YTg~~~~-~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V 81 (464)
+....+..++|.++++. .+|+++|+|++.... ..+.+++|+|+|. .+|.+... ...+.. .....+||.|
T Consensus 50 ~~~~~~~~~~waP~v~~-~~g~yyl~y~~~~~~~~~~~i~~a~s~d~-----~g~~~~~~---~~~~~~-~~~~~iDp~v 119 (271)
T cd08978 50 RGEAKDSGGLWAPEVIY-YEGKYYLYYSVSDFDYNGSGIGVATSEDP-----TGPFEDKV---IRPPTS-NNGNSIDPTV 119 (271)
T ss_pred cCCcccCCceeCCeEEE-ECCEEEEEEEcccCCCCcccEEEEECCCC-----CCCccccc---cCcCcc-CCCCccCcce
Confidence 34456678999999986 689999999997532 3467899999885 56665421 111111 2347899999
Q ss_pred eeecCCCcEEEEEEeecC--CceEEEEEEeCCCCCCeEcce-eee-cCCCCCceEeceEEEec
Q 012389 82 AWAGPDGKWRLTIGSKIG--KTGISLVYQTTDFKTYELLDE-YLH-AVPGTGMWECVDFYPVA 140 (464)
Q Consensus 82 ~w~~~~g~~~mv~ga~~~--~~g~~~ly~S~Dl~~W~~~g~-l~~-~~~~~g~wECPdlf~l~ 140 (464)
|..++|++||+.++... ..+.+.+.++++...|..... +.. ......+.|||.+|+.+
T Consensus 120 -f~d~dg~~yl~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~EgP~~~k~~ 181 (271)
T cd08978 120 -FKDDDGKYYLYYGSGDPGAGFGGIYISELTDDLTKPTGPPVLSASSGNNNAVTEGPTIFKKN 181 (271)
T ss_pred -EEcCCCCEEEEEecccCCCCCCcEEEEEECcccccccCCceeeeeeccCCCceEccEEEEEC
Confidence 54456999999987532 245688888876544432222 111 11123489999999986
No 23
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.63 E-value=9e-08 Score=94.35 Aligned_cols=87 Identities=22% Similarity=0.318 Sum_probs=60.4
Q ss_pred CCCceeeCCCCCCCCCeecCcceeecCCCcEEEEEEeec-----CCceEEEEEEeCCCCCCeEcceeeecCCCCC-ceEe
Q 012389 60 PGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKTGISLVYQTTDFKTYELLDEYLHAVPGTG-MWEC 133 (464)
Q Consensus 60 ~~~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv~ga~~-----~~~g~~~ly~S~Dl~~W~~~g~l~~~~~~~g-~wEC 133 (464)
.++|||.+..+ ...+|||+|++..++|.|||+..... .....+.+|+|+||++|+..+.+.......+ +| |
T Consensus 4 ~~~pvl~~~~g--~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W-A 80 (276)
T cd08983 4 NGNPVLTSTAG--TKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW-A 80 (276)
T ss_pred CCceEEeCCcC--CCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-C
Confidence 35899986433 57899999955335789999976532 1233689999999999999887653322334 78 9
Q ss_pred ceEEEecccCccceee
Q 012389 134 VDFYPVAINGSVGLDT 149 (464)
Q Consensus 134 Pdlf~l~~~~~~~l~~ 149 (464)
|++|..+..+..++++
T Consensus 81 Pev~~d~~~g~y~~~~ 96 (276)
T cd08983 81 PEAFWDAERGQYVVYW 96 (276)
T ss_pred ccceEcCCCCeEEEEE
Confidence 9999987444333333
No 24
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=98.43 E-value=2.6e-07 Score=92.53 Aligned_cols=118 Identities=21% Similarity=0.218 Sum_probs=82.5
Q ss_pred CCCCCccCCCCEEEeEEEEcCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCC---CCCCCCee
Q 012389 1 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFR 77 (464)
Q Consensus 1 l~P~~~~D~~Gv~SGsa~~~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~---~~~~~~~R 77 (464)
|.|+..||..||....++. .+|+++|+||++...+ ..+++|+|+|. .+|+|++ +++.... .......+
T Consensus 81 l~P~~~~e~~GvEDPRVt~-i~d~yymtYta~~~~~-~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~k 151 (312)
T PF04041_consen 81 LYPDTDYEEWGVEDPRVTK-IDDTYYMTYTAYSGKG-PRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSK 151 (312)
T ss_dssp BEE-SSTTHTEEEEEEEEE-ETTEEEEEEEEEESSS-EEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEE
T ss_pred EccCCCCcccCccceeEEE-ECCEEEEEEEEecCCC-cccceEEccch-----HhhEEec--cccCcccccccccccccC
Confidence 4689999999999999986 6899999999998654 56899999996 9999984 3322211 01111236
Q ss_pred cCcceeecCCCcEEEEEEeecCCceEEEEEEeCCCCCCeEcceeeecCCCCCceEe
Q 012389 78 DPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWEC 133 (464)
Q Consensus 78 DP~V~w~~~~g~~~mv~ga~~~~~g~~~ly~S~Dl~~W~~~g~l~~~~~~~g~wEC 133 (464)
|=.+|-...+|+|+|+.+ .+.+.|-.|+||++|+.....+.. ...+.||+
T Consensus 152 d~~lfp~ki~Gky~m~~r-----~~~i~la~S~Dl~~W~~~~~~~~~-~~~~~~d~ 201 (312)
T PF04041_consen 152 DGALFPEKINGKYAMLHR-----DPSIWLAYSPDLIHWGNHREPLLS-PRPGWWDS 201 (312)
T ss_dssp CCEEEESEETTEEEEEEE-----SSSBEEEEESSSSSEEEEBETSB---STTSSCS
T ss_pred ceEEEEEEECCEEEEEEC-----CCCEEEEecCCccccccccccccc-CCCCcChh
Confidence 655532225789999988 356889999999999887652222 22346776
No 25
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.38 E-value=3.1e-06 Score=83.14 Aligned_cols=65 Identities=18% Similarity=0.124 Sum_probs=46.0
Q ss_pred CeecCcceeecCCCcEEEEEEeecC---------CceEEEEEEeCCCCCCeEcceeeecCC--------------CCCce
Q 012389 75 DFRDPTTAWAGPDGKWRLTIGSKIG---------KTGISLVYQTTDFKTYELLDEYLHAVP--------------GTGMW 131 (464)
Q Consensus 75 ~~RDP~V~w~~~~g~~~mv~ga~~~---------~~g~~~ly~S~Dl~~W~~~g~l~~~~~--------------~~g~w 131 (464)
.+|||+| ++..+|.|||+..+... ..+.+.+|+|+||++|+..+.++.... ..+..
T Consensus 1 ~~rDP~v-~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (269)
T cd08986 1 WIRDTYV-TLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAV 79 (269)
T ss_pred CCcCCeE-EecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCc
Confidence 3799999 65556788888665321 134688999999999999887763211 12233
Q ss_pred EeceEEEec
Q 012389 132 ECVDFYPVA 140 (464)
Q Consensus 132 ECPdlf~l~ 140 (464)
+||+++.++
T Consensus 80 WAP~v~~~~ 88 (269)
T cd08986 80 WAPELHYIK 88 (269)
T ss_pred CCceEEEEC
Confidence 499999986
No 26
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.30 E-value=1.8e-05 Score=78.56 Aligned_cols=123 Identities=14% Similarity=0.051 Sum_probs=79.2
Q ss_pred ccCCCCEEEeEEEEcCCCcEEEEEcccCCC-CeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceee
Q 012389 6 WYDINGVWTGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWA 84 (464)
Q Consensus 6 ~~D~~Gv~SGsa~~~~~g~~~~~YTg~~~~-~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~ 84 (464)
.++..++|.++++. .+|+++|+|++.... ..+.+++|+|+|.- -.|++....++ .. .....||.| +.
T Consensus 49 ~~~~~~~waP~v~~-~~g~yyl~ys~~~~~~~~~~i~~a~s~~p~----gp~~~~~~~~~-~~-----~~~~iD~~v-f~ 116 (294)
T cd08991 49 DWGRRGFWAPEVYY-YNGKFYMYYSANDRDEKTEHIGVAVSDSPL----GPFRDIKKPPI-DF-----EPKSIDAHP-FI 116 (294)
T ss_pred CccCCcEEccEEEE-ECCEEEEEEEeccCCCCcceEEEEEeCCCC----CCCCcCCCCcc-cC-----CCcccCCce-EE
Confidence 37788999999976 689999999998643 45678999998741 35776532222 21 135689999 44
Q ss_pred cCCCcEEEEEEeecCC---ceEEEEEEeCCCCCCeEcce--ee--ec--------------CCCCCceEeceEEEec
Q 012389 85 GPDGKWRLTIGSKIGK---TGISLVYQTTDFKTYELLDE--YL--HA--------------VPGTGMWECVDFYPVA 140 (464)
Q Consensus 85 ~~~g~~~mv~ga~~~~---~g~~~ly~S~Dl~~W~~~g~--l~--~~--------------~~~~g~wECPdlf~l~ 140 (464)
.++|+|||+.+..... .+..+.--|.|+.+|.-... .. .. .....+.|+|.+++.+
T Consensus 117 d~dG~~yl~~~~~~~~~~~~~i~~~~l~~d~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~ 193 (294)
T cd08991 117 DDDGKPYLYYSRNNYGNRVSDIYGTELVDDKLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN 193 (294)
T ss_pred CCCCCEEEEEEecCCCCcccceEEEEEccceeeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC
Confidence 4679999999864211 23333334788877752111 00 00 0012389999999996
No 27
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.28 E-value=2.3e-05 Score=77.99 Aligned_cols=115 Identities=11% Similarity=0.142 Sum_probs=76.7
Q ss_pred EeEEEEcC-CCcEEEEEcccCCC-C--------eeeEEEEEeCC-CCCCCcceEEEcCCCceeeCCCCCCCCCeecCcce
Q 012389 14 TGSATILP-DGQIVMLYTGSTDK-S--------VQVQNLAYPAD-PSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 82 (464)
Q Consensus 14 SGsa~~~~-~g~~~~~YTg~~~~-~--------~~~q~lA~S~D-~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~ 82 (464)
..+++.+. +++++||||..... . ...+++|.|+| + ++|++....++ . .......++.+|.|+
T Consensus 13 DP~i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l-----~~W~~~g~~~~-~-~~~~~~~~~WAP~v~ 85 (294)
T cd08984 13 DPTIIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGG-----ATWTYRGTADG-L-EFECGRNTFWAPEVV 85 (294)
T ss_pred CCEEEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCC-----CCCEEeeeecc-C-CCCCcccceeCceEE
Confidence 34445432 56899999964321 1 13689999999 5 99998643222 2 122234567899995
Q ss_pred eecCCCcEEEEEEeec------CCceEEEEEEeCCCCCCeEcceeeecCCCCCceEeceEEEec
Q 012389 83 WAGPDGKWRLTIGSKI------GKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 140 (464)
Q Consensus 83 w~~~~g~~~mv~ga~~------~~~g~~~ly~S~Dl~~W~~~g~l~~~~~~~g~wECPdlf~l~ 140 (464)
+ .+|+|||++.+.. +....+.+++|+||.+|+..+.+... . ...-+|.+|+.+
T Consensus 86 ~--~~G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl~~w~~~~~~~~~--~-~~~iD~~vf~~~ 144 (294)
T cd08984 86 W--HGGVYHMYVTYIPGVPPDWGGPRRIVHYTSPNLWDWTFVGRVDLD--S-DRVIDACVFKLP 144 (294)
T ss_pred E--ECCEEEEEEEecCCCCcccCCCcEEEEEECCCcCcceECCccccC--C-CCcEEeEEEEeC
Confidence 5 3799999998752 12347889999999999998876321 1 244589999875
No 28
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=98.27 E-value=9.5e-06 Score=79.67 Aligned_cols=68 Identities=18% Similarity=0.239 Sum_probs=49.4
Q ss_pred CceeeCCCCCCCCCeecCcceeecCCCcEEEEEEeecCCceEEEEEEeCCCCCCeEcceeeecC---------CCCCceE
Q 012389 62 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAV---------PGTGMWE 132 (464)
Q Consensus 62 ~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv~ga~~~~~g~~~ly~S~Dl~~W~~~g~l~~~~---------~~~g~wE 132 (464)
||||. ..+.||.| .+ .++.|||+.+..... +.+.+|+|+||.+|+..+..+... ...++|
T Consensus 1 NPvi~-------~~~~DP~i-i~-~~~~yY~~~t~~~~~-~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~W- 69 (269)
T cd08989 1 NPILK-------GDNPDPSI-IR-AGDDYYMASSTFEWF-PGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIW- 69 (269)
T ss_pred CCcCC-------CCCCCCcE-EE-ECCeEEEEECccccC-CCcEEEECCccCCCEEccccccCccccccccCCCCCcEE-
Confidence 67874 25789999 65 578999997653322 247899999999999988765321 112378
Q ss_pred eceEEEec
Q 012389 133 CVDFYPVA 140 (464)
Q Consensus 133 CPdlf~l~ 140 (464)
||+++..+
T Consensus 70 AP~v~~~~ 77 (269)
T cd08989 70 APCLSYYD 77 (269)
T ss_pred cceEEEEC
Confidence 99999985
No 29
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=98.27 E-value=2.5e-06 Score=82.83 Aligned_cols=109 Identities=17% Similarity=0.226 Sum_probs=87.6
Q ss_pred ccCCC----CEEEeEEEEcCCCcEEEEEccc-----CCCCeeeEEEEEeCCCCCCCcce-EEEcCCCceeeC-CCCCCCC
Q 012389 6 WYDIN----GVWTGSATILPDGQIVMLYTGS-----TDKSVQVQNLAYPADPSDPLLLD-WVKYPGNPVLVP-PRHIGPK 74 (464)
Q Consensus 6 ~~D~~----Gv~SGsa~~~~~g~~~~~YTg~-----~~~~~~~q~lA~S~D~gd~~l~~-w~k~~~~Pvi~~-p~~~~~~ 74 (464)
++++. .+|.++++. .++++.|+|... .........+|.|+|+ ++ |++. .+|++.| ...++..
T Consensus 21 ~~~~~~~~~~vFNpav~~-~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e-~ep~~~P~~~~~e~~ 93 (314)
T COG2152 21 PPHARFIVVSVFNPAVVL-VGGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIE-PEPTLWPANYPYEIY 93 (314)
T ss_pred CCCCceeEEEEecceeEE-ECCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecC-CcceEecCCCchhhh
Confidence 45667 899999986 799999999883 2335677899999997 67 9986 4899887 3345667
Q ss_pred CeecCcceeecCCCcEEEEEEeecCCceEEEEEEeCCCCCCeEcceeee
Q 012389 75 DFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLH 123 (464)
Q Consensus 75 ~~RDP~V~w~~~~g~~~mv~ga~~~~~g~~~ly~S~Dl~~W~~~g~l~~ 123 (464)
+.-||.|+. -+++|+|.+.+..+.+....+..++|+.+|++.+.++.
T Consensus 94 G~EDPRvt~--I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~~ 140 (314)
T COG2152 94 GIEDPRVTK--IGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIFP 140 (314)
T ss_pred cccCceEEE--ECCEEEEEEEecCCCCcccchhhhhhhhhhhhcccccC
Confidence 889999943 47999999999766666788899999999999988764
No 30
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=98.20 E-value=1.5e-05 Score=81.49 Aligned_cols=126 Identities=23% Similarity=0.245 Sum_probs=77.8
Q ss_pred CCEEEeEEEEcC-CCcEEEEEcccCC----CCeee-----EEEEEeCCCCCCCcceEEEcCCCceeeCCCCC--------
Q 012389 10 NGVWTGSATILP-DGQIVMLYTGSTD----KSVQV-----QNLAYPADPSDPLLLDWVKYPGNPVLVPPRHI-------- 71 (464)
Q Consensus 10 ~Gv~SGsa~~~~-~g~~~~~YTg~~~----~~~~~-----q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~-------- 71 (464)
.--|||||+++. +|++.||||+... ...|. ..++...|.+ ..+..|.++ ..++. ++|.
T Consensus 130 s~EWSGSA~l~~~dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~-v~i~g~~~~--~~lfe-~DG~~Yqt~~Q~ 205 (428)
T PF02435_consen 130 SREWSGSATLNNDDGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDG-VWITGFSNH--HELFE-GDGKHYQTYEQN 205 (428)
T ss_dssp EEEEEEEEEESTTTSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTE-EEEEEEEEE--EEEES---SSSB--HHHH
T ss_pred CcEecCceEEcCCCCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCc-eeEccccce--eEeec-cchhhhhChhhc
Confidence 447999999876 8999999999643 22222 2233444422 122334443 34444 3331
Q ss_pred CCCCeecCcceeec-CCCcEEEEEEee---c----------------------C--------CceEEEEEEeCC--CCCC
Q 012389 72 GPKDFRDPTTAWAG-PDGKWRLTIGSK---I----------------------G--------KTGISLVYQTTD--FKTY 115 (464)
Q Consensus 72 ~~~~~RDP~V~w~~-~~g~~~mv~ga~---~----------------------~--------~~g~~~ly~S~D--l~~W 115 (464)
....||||++ ++. .+|+-||+.-+. . . ..|+|.|-+.+| +..|
T Consensus 206 ~~~afRDP~~-f~DP~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w 284 (428)
T PF02435_consen 206 PGYAFRDPHV-FEDPEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVW 284 (428)
T ss_dssp HH---EEEEE-EEETTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEE
T ss_pred CCccccCCee-EECCCCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCCCCcc
Confidence 1357999999 654 588888887542 0 0 257888888755 5689
Q ss_pred eEcceeeecCCCCCceEeceEEEec
Q 012389 116 ELLDEYLHAVPGTGMWECVDFYPVA 140 (464)
Q Consensus 116 ~~~g~l~~~~~~~g~wECPdlf~l~ 140 (464)
+...+|+.+..-....|=|+++.++
T Consensus 285 ~~~~PL~~a~~v~de~ERP~iv~~~ 309 (428)
T PF02435_consen 285 ELLPPLLSANGVNDELERPHIVFMN 309 (428)
T ss_dssp EEEEEEEEETTTBS-EEEEEEEEET
T ss_pred EEeCcceecccccccccCCcEEEEC
Confidence 9999999764333489999999997
No 31
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.14 E-value=3.3e-05 Score=76.79 Aligned_cols=67 Identities=15% Similarity=0.074 Sum_probs=47.5
Q ss_pred CCeecCcceeecCCCcEEEEEEeecC----CceEEEEEEeCCCCCCeEcceeeecCCC---CCceEeceEEEec
Q 012389 74 KDFRDPTTAWAGPDGKWRLTIGSKIG----KTGISLVYQTTDFKTYELLDEYLHAVPG---TGMWECVDFYPVA 140 (464)
Q Consensus 74 ~~~RDP~V~w~~~~g~~~mv~ga~~~----~~g~~~ly~S~Dl~~W~~~g~l~~~~~~---~g~wECPdlf~l~ 140 (464)
..+|||+|++...+|.|||+..+... ....+.+|+|+||++|+..+.++..... .....+|++++.+
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~ 77 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK 77 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC
Confidence 46899999553358899999765421 1124789999999999999887743221 2234599999885
No 32
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.13 E-value=3.2e-05 Score=76.31 Aligned_cols=67 Identities=27% Similarity=0.445 Sum_probs=49.2
Q ss_pred CceeeCCCCCCCCCeecCcceeecCCCcEEEEEEeecCCceEEEEEEeCCCCCCeEcceeeecCC---CCC-ceEeceEE
Q 012389 62 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVP---GTG-MWECVDFY 137 (464)
Q Consensus 62 ~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv~ga~~~~~g~~~ly~S~Dl~~W~~~g~l~~~~~---~~g-~wECPdlf 137 (464)
||||. .+++||.| ++ .+|+|||+...... ..+.+|+|+||.+|++.+.++.... ..+ +| +|+++
T Consensus 1 nPv~~-------~~~~DP~i-~~-~~g~yy~~~t~~~~--~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~w-aP~v~ 68 (287)
T cd08999 1 NPVID-------GDFPDPSV-IR-VDGTYYAYATNGNG--PNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFW-APDVS 68 (287)
T ss_pred CCccC-------CCCCCCeE-EE-ECCEEEEEEeCCCC--CcEEEEECCCCCCcEECCcccCCCCCcccCCCcc-CceEE
Confidence 67764 36799999 54 47999998654321 4688999999999999997664322 123 55 99999
Q ss_pred Eec
Q 012389 138 PVA 140 (464)
Q Consensus 138 ~l~ 140 (464)
..+
T Consensus 69 ~~~ 71 (287)
T cd08999 69 YVN 71 (287)
T ss_pred EEC
Confidence 986
No 33
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=98.10 E-value=3.7e-05 Score=75.95 Aligned_cols=68 Identities=19% Similarity=0.322 Sum_probs=49.3
Q ss_pred CCceeeCCCCCCCCCeecCcceeecCCCcEEEEEEeecCCceEEEEEEeCCCCCCeEcceeeecCCCCCceEeceEEEec
Q 012389 61 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 140 (464)
Q Consensus 61 ~~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv~ga~~~~~g~~~ly~S~Dl~~W~~~g~l~~~~~~~g~wECPdlf~l~ 140 (464)
.||||.. .+.||.| ++ .++.|||+..+.. ..+.+.+|+|+||.+|+..+..+.. ...++| +|++++.+
T Consensus 7 ~nPv~~~-------~~~DP~i-~~-~~~~yY~~~t~~~-~~~gi~i~~S~DL~~W~~~g~~~~~-~~~~~W-AP~i~~~~ 74 (280)
T cd09002 7 RNPILAG-------DYPDPSI-LR-DGEDYYMTHSSFK-YTPGLVIWHSRDLVNWTPVGPALPE-YEGDVW-APDLCKYD 74 (280)
T ss_pred eCCccCC-------CCCCCEE-EE-ECCEEEEEEcchh-cCCCEEEEECCCcCCceEccccccC-CCCCEE-cCeeEEEC
Confidence 3788752 4589999 55 4789999755322 2235889999999999998876542 123489 89999975
No 34
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.02 E-value=0.00013 Score=73.66 Aligned_cols=107 Identities=21% Similarity=0.305 Sum_probs=76.5
Q ss_pred CCccCCCCEEEeEEEEcCCCcEEEEEcccCCC----CeeeEEEEEeCCCCCCCcceEEEcCCCceeeCC-C---------
Q 012389 4 DQWYDINGVWTGSATILPDGQIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-R--------- 69 (464)
Q Consensus 4 ~~~~D~~Gv~SGsa~~~~~g~~~~~YTg~~~~----~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p-~--------- 69 (464)
...||..++|..+++. .+|+++|||++.... ..+..++|+|++.. -.|++. .+||+.+. +
T Consensus 104 ~g~Wd~~~vwaP~Vi~-~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~~~ 177 (349)
T cd08992 104 KGAYDDRSVFTPEVLE-HEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDEDN 177 (349)
T ss_pred CCCccccceECcEEEE-ECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeeccCc
Confidence 4469999999999975 799999999986421 23567999998752 259986 58998642 1
Q ss_pred --------CCCCCCeecCcceeecCCCcEEEEEEeec--------CCceEEEEEEeCCCC-CCeEc
Q 012389 70 --------HIGPKDFRDPTTAWAGPDGKWRLTIGSKI--------GKTGISLVYQTTDFK-TYELL 118 (464)
Q Consensus 70 --------~~~~~~~RDP~V~w~~~~g~~~mv~ga~~--------~~~g~~~ly~S~Dl~-~W~~~ 118 (464)
.++...+.||.| ++ .+|+|||++.+.. ....++.+..|++.. -|+..
T Consensus 178 ~~~~~~~g~wD~~~v~~P~v-~~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~ 241 (349)
T cd08992 178 RFLVKKKGSFDSHKVHDPCL-FP-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKS 241 (349)
T ss_pred eeEeccCCCcccCceECCEE-EE-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeC
Confidence 134556899999 54 4799999996642 112367788898865 57654
No 35
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.01 E-value=4.6e-05 Score=76.96 Aligned_cols=119 Identities=17% Similarity=0.175 Sum_probs=83.8
Q ss_pred CCccCCCCEEEeEEEEcCCCcEEEEEcccCC-------CCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCe
Q 012389 4 DQWYDINGVWTGSATILPDGQIVMLYTGSTD-------KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDF 76 (464)
Q Consensus 4 ~~~~D~~Gv~SGsa~~~~~g~~~~~YTg~~~-------~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~ 76 (464)
...||..+|...+++. .+|+++|||+|+.. ...+.+++|+|++.- --|+|.+.|||+.. .+.
T Consensus 184 ~g~wD~~~v~~P~v~~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~----GPf~r~~~nPi~~~------~~~ 252 (349)
T cd08992 184 KGSFDSHKVHDPCLFP-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPE----GPYVKSPYNPITNS------GHE 252 (349)
T ss_pred CCCcccCceECCEEEE-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCC----CCCEeCCCCcccCC------CCc
Confidence 3458899998888764 79999999999762 134678999998753 46999888999753 122
Q ss_pred ecCcceeecCCCcE-EEEEEeecCCceEEEEEEeCCCCCCeEcceeeecCCCCCceEeceEEEec
Q 012389 77 RDPTTAWAGPDGKW-RLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 140 (464)
Q Consensus 77 RDP~V~w~~~~g~~-~mv~ga~~~~~g~~~ly~S~Dl~~W~~~g~l~~~~~~~g~wECPdlf~l~ 140 (464)
.+| |+ ..+.+ .|+..-+.+ .+. +..|+|.++|+-...+...+...|...|||-+.-+
T Consensus 253 --~~~-~~-~~~~~~~~~~~d~~~-~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (349)
T cd08992 253 --TCV-WQ-YKGGIAAMLTTDGPE-KNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRPDADEDP 310 (349)
T ss_pred --eEE-Ee-cCCceEEEEeccCCC-Cce--EEeCCCCccEEEeeeccCCCccccCccCcccccCC
Confidence 388 97 45667 565443322 233 66799999999876665443445677788877664
No 36
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=97.99 E-value=0.00014 Score=71.57 Aligned_cols=114 Identities=10% Similarity=0.057 Sum_probs=76.1
Q ss_pred EEEcCCCcEEEEEcccCCC-----CeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCC-CCCCCCeecCcceeecCCCcE
Q 012389 17 ATILPDGQIVMLYTGSTDK-----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR-HIGPKDFRDPTTAWAGPDGKW 90 (464)
Q Consensus 17 a~~~~~g~~~~~YTg~~~~-----~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~-~~~~~~~RDP~V~w~~~~g~~ 90 (464)
.+. .+|+++|||+.+... +.....+|+|+|+ +||++.+ +++.+++ .......-.|.++. .+|+|
T Consensus 5 ~~~-~~G~yhlfyq~~p~~~~~~~~~~~wgha~S~Dl-----v~W~~~~--~al~~~~~~~d~~g~~sgs~~~--~~g~~ 74 (280)
T cd08995 5 PFY-DDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDL-----VNYEDHG--EAIPRGGDEDDDDAIGTGSVIK--GEGTY 74 (280)
T ss_pred ceE-ECCEEEEEEEcCCCCCCcccCCceEEEEEccCc-----CccEECc--ceecCCCCcccccCceEeEEEe--eCCEE
Confidence 344 589999999987642 2345789999996 9999973 3444322 22345677899843 46899
Q ss_pred EEEEEeecC---CceEEEEEEeCCCCCCeEcce--eeecCCCC--CceEeceEEEec
Q 012389 91 RLTIGSKIG---KTGISLVYQTTDFKTYELLDE--YLHAVPGT--GMWECVDFYPVA 140 (464)
Q Consensus 91 ~mv~ga~~~---~~g~~~ly~S~Dl~~W~~~g~--l~~~~~~~--g~wECPdlf~l~ 140 (464)
+|++.+... ....+.+..|+|+.+|+.... +....... ..+.-|.+|.-+
T Consensus 75 ~l~YTg~~~~~~~~~~i~~A~S~D~~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~ 131 (280)
T cd08995 75 HAFYTGHNLDGKPKQVVMHATSDDLITWTKDPEFILIADGEGYEKNDWRDPFVFWNE 131 (280)
T ss_pred EEEEEEECCCCCCcEEEEEEECCCCCccEECCCCeecCCccccccCCccCCcEEEcC
Confidence 999987531 234678899999999998653 33211111 146678888764
No 37
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=97.96 E-value=0.00028 Score=69.89 Aligned_cols=124 Identities=18% Similarity=0.133 Sum_probs=78.8
Q ss_pred cCCCCEEEeEEEEcCCCcEEEEEcccCCC-CeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeec
Q 012389 7 YDINGVWTGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAG 85 (464)
Q Consensus 7 ~D~~Gv~SGsa~~~~~g~~~~~YTg~~~~-~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~ 85 (464)
.+..++|.+.++. .+|+++|||++.... ....+++|+|+|. ..-.|++. +||+...++......+||.| +..
T Consensus 53 ~~~~~~wAP~v~~-~~g~yyl~ys~~~~~~~~~~i~va~s~~~---~~gpw~~~--~~v~~~~~~~~~~~~iDp~v-f~d 125 (288)
T cd08998 53 GGSGNLWAPDVIY-LNGKYYLYYSVSTFGSNRSAIGLATSDTL---PDGPWTDH--GIVIESGPGRDDPNAIDPNV-FYD 125 (288)
T ss_pred CCCCCccCCeEEE-ECCEEEEEEEEEeCCCCceEEEEEEeCCC---CCCCCEEc--ceeeecCCCCCCcccccCCE-EEc
Confidence 4577899999976 699999999987643 3456789999874 01479874 58887543212346899999 444
Q ss_pred CCCcEEEEEEeecCCceEEEEEEe-CC---CCCCeEcce-eeecCCCCCceEeceEEEec
Q 012389 86 PDGKWRLTIGSKIGKTGISLVYQT-TD---FKTYELLDE-YLHAVPGTGMWECVDFYPVA 140 (464)
Q Consensus 86 ~~g~~~mv~ga~~~~~g~~~ly~S-~D---l~~W~~~g~-l~~~~~~~g~wECPdlf~l~ 140 (464)
++|++||++++... + +.+.+- .| ...|..... +.......+..|-|.+|+-+
T Consensus 126 ~dG~~Yl~~~~~~~--~-i~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~Egp~~~k~~ 182 (288)
T cd08998 126 EDGKLWLSFGSFWG--G-IFLVELDPKTGKPLYPGGYGYNIAGRPRGHGAIEAPYIIYRG 182 (288)
T ss_pred CCCCEEEEeeeccC--C-EEEEEeCcccCCccCCCCcceEEeccCCCCCceeeeEEEEeC
Confidence 68999999986421 2 333332 22 234421122 22111123468999999886
No 38
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=97.90 E-value=0.00046 Score=67.64 Aligned_cols=118 Identities=14% Similarity=0.005 Sum_probs=77.5
Q ss_pred ccCCCCEEEeEEEEc-CCCcEEEEEcccCCC-CeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCccee
Q 012389 6 WYDINGVWTGSATIL-PDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAW 83 (464)
Q Consensus 6 ~~D~~Gv~SGsa~~~-~~g~~~~~YTg~~~~-~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w 83 (464)
.....++|.++++.. .+|+++|+|++.... ....+++|+|++-- --|+... .+. +.+ ...|||.||+
T Consensus 59 ~~~~~~~waP~v~y~~~~g~Y~m~~~~~~~~~~~~~igvA~Sd~p~----Gpf~~~~-~~~---~~~---~~~~Dp~vf~ 127 (265)
T cd08985 59 LGPGRIIERPKVIYNAKTGKYVMWMHIDSSDYSDARVGVATSDTPT----GPYTYLG-SFR---PLG---YQSRDFGLFV 127 (265)
T ss_pred cccCcEEECCeEEEeCCCCEEEEEEEeCCCCCcceeEEEEEeCCCC----CCCEECC-ccC---CCC---CCccCCceEE
Confidence 345667999999864 368999999987532 34578899997531 2466542 221 222 4679999955
Q ss_pred ecCCCcEEEEEEeecCCceEEEEEE-eCCCCCCeEcceeeecCCCCCceEeceEEEec
Q 012389 84 AGPDGKWRLTIGSKIGKTGISLVYQ-TTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 140 (464)
Q Consensus 84 ~~~~g~~~mv~ga~~~~~g~~~ly~-S~Dl~~W~~~g~l~~~~~~~g~wECPdlf~l~ 140 (464)
+++|++||++++..+ ..+.+.+ ++|+.++.- ..... ......|||.+|+.+
T Consensus 128 -DdDG~~Yl~~~~~~~--~~i~i~~L~~d~~~~~~--~~~~~-~~~~~~EaP~i~K~~ 179 (265)
T cd08985 128 -DDDGTAYLLYSDRDN--SDLYIYRLTDDYLSVTG--EVTTV-FVGAGREAPAIFKRN 179 (265)
T ss_pred -cCCCCEEEEEecCCC--CceEEEEeCCCcccccc--eEEEc-cCCCccccceEEEEC
Confidence 578899999987532 2355666 367777743 22211 112379999999996
No 39
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=97.87 E-value=0.00021 Score=70.96 Aligned_cols=112 Identities=14% Similarity=0.117 Sum_probs=77.3
Q ss_pred CCCcEEEEEcccCCC---CeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeecCCCcEEEEEEee
Q 012389 21 PDGQIVMLYTGSTDK---SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 97 (464)
Q Consensus 21 ~~g~~~~~YTg~~~~---~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv~ga~ 97 (464)
.+|+++|||+.+-.. +....++|+|+|. +||++.+ ++|.++...+....-.+.+ ....+|+++|++.+.
T Consensus 12 ~~G~yhlfyq~~p~~~~~~~~~wgha~S~Dl-----v~W~~~~--~al~p~~~~d~~g~~sGsa-v~~~~g~~~~~YTg~ 83 (298)
T cd08996 12 FNGKYHLFYQYNPFGPVWGNMHWGHATSKDL-----VHWEHLP--VALAPDDPYDSGGCFSGSA-VVDDNGKLVLFYTGN 83 (298)
T ss_pred ECCEEEEEEcCCCCCCCCCCcEEEEEEecCc-----cceeECC--cccCCCCcccCCeEEeCeE-EEcCCCcEEEEEece
Confidence 578999999976532 3456789999996 9999973 4454433344567788888 443338999998875
Q ss_pred c----CCceEEEEEEeC-CCCCCeEcceeeec---CCCCCceEeceEEEec
Q 012389 98 I----GKTGISLVYQTT-DFKTYELLDEYLHA---VPGTGMWECVDFYPVA 140 (464)
Q Consensus 98 ~----~~~g~~~ly~S~-Dl~~W~~~g~l~~~---~~~~g~wECPdlf~l~ 140 (464)
. .....+.+..|+ |+.+|+..+..... ......++.|.+|.-+
T Consensus 84 ~~~~~~~~~~~~lA~S~ddg~~w~k~~~~~~~~~~~~~~~~~RDP~V~~~~ 134 (298)
T cd08996 84 VKLDGGRRQTQCLAYSTDDGRTFTKYEGNPVIPPPDGYTTHFRDPKVFWHD 134 (298)
T ss_pred eCCCCCceEEEEEEEEcCCCCEEEECCCCceEcCCCCCCCcccCCeEEeEC
Confidence 3 234467778887 89999987653221 1122368899999886
No 40
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=97.69 E-value=0.00033 Score=68.88 Aligned_cols=68 Identities=19% Similarity=0.275 Sum_probs=48.6
Q ss_pred CceeeCCCCCCCCCeecCcceeecCCCcEEEEEEeecCCceEEEEEEeCCCCCCeEcceeeecCC--C---CCc-eEece
Q 012389 62 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVP--G---TGM-WECVD 135 (464)
Q Consensus 62 ~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv~ga~~~~~g~~~ly~S~Dl~~W~~~g~l~~~~~--~---~g~-wECPd 135 (464)
||||. ..++||.| .+ .++.|||+.+..... ..+.+++|+||++|+..+..+.... . ... | -|+
T Consensus 3 NPv~~-------~~~~DP~i-~~-~~~~yY~~~t~~~~~-~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~W-AP~ 71 (286)
T PF04616_consen 3 NPVID-------GDYADPSI-VR-FGDGYYLYGTTDPEG-PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIW-APE 71 (286)
T ss_dssp SSSBT-------SSECSEEE-EE-ETTEEEEEEEEBTCE-SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTE-EEE
T ss_pred CCccC-------CCCCCCEE-EE-ECCEEEEEEEcCCCC-CeEEEEECCCCcccccceeeeccccccccccccccc-CCe
Confidence 78874 36799999 54 466799997665322 3488999999999999997664321 1 112 6 899
Q ss_pred EEEec
Q 012389 136 FYPVA 140 (464)
Q Consensus 136 lf~l~ 140 (464)
++..+
T Consensus 72 i~~~~ 76 (286)
T PF04616_consen 72 IHYIN 76 (286)
T ss_dssp EEEET
T ss_pred EEEcC
Confidence 99775
No 41
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.67 E-value=0.00052 Score=68.05 Aligned_cols=59 Identities=22% Similarity=0.303 Sum_probs=41.6
Q ss_pred cCcceeecCCCcEEEEEEeecCCceEEEEEEeCCCCCCeEcceeeecCC----CCCceEeceEEEec
Q 012389 78 DPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVP----GTGMWECVDFYPVA 140 (464)
Q Consensus 78 DP~V~w~~~~g~~~mv~ga~~~~~g~~~ly~S~Dl~~W~~~g~l~~~~~----~~g~wECPdlf~l~ 140 (464)
||.| .+ .+|.|||+...... ...+.+|+|+||++|++.+..+.... ..++| +|.++..+
T Consensus 2 DP~v-~~-~~g~yyl~~t~~~~-~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~w-aP~v~~~~ 64 (294)
T cd08991 2 DPFV-LR-YNGKYYAYGTGGAD-GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFW-APEVYYYN 64 (294)
T ss_pred CCeE-EE-ECCEEEEEEeCCCC-CCeeEEEECCCCCCceECCccccCCCCCccCCcEE-ccEEEEEC
Confidence 8999 54 36899998433222 23488999999999999987654322 12355 99999986
No 42
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=97.66 E-value=0.00068 Score=66.84 Aligned_cols=130 Identities=17% Similarity=0.187 Sum_probs=82.3
Q ss_pred CCCEEEeEEEEc-CCCcEEEEEcccCC----CCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCccee
Q 012389 9 INGVWTGSATIL-PDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAW 83 (464)
Q Consensus 9 ~~Gv~SGsa~~~-~~g~~~~~YTg~~~----~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w 83 (464)
..|+=..+++.. .+|+++|++|.... ...+.+.+|.|.|. ++|++.. .+...++. ..+.-.|.|+|
T Consensus 15 ~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DL-----v~W~~~~--~~~~~~~~--~~~~WAPev~~ 85 (276)
T cd08983 15 TKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDL-----VNWTFQR--LVKVNPPN--AGNTWAPEAFW 85 (276)
T ss_pred CCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcc-----cCCcccc--eeecCCCC--cCcEeCccceE
Confidence 456667788764 47899999998742 12456789999985 9999853 33222222 12344899977
Q ss_pred ecCCCcEEEEEEeecC-----CceEEEEEEe-CCCCCCeEcceeeecCCCCCceEeceEEEecccCccceeecCC
Q 012389 84 AGPDGKWRLTIGSKIG-----KTGISLVYQT-TDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSAT 152 (464)
Q Consensus 84 ~~~~g~~~mv~ga~~~-----~~g~~~ly~S-~Dl~~W~~~g~l~~~~~~~g~wECPdlf~l~~~~~~~l~~~~~ 152 (464)
.+++|+|+|++.+... .....+-+.+ .|+..|+..++++. .+.+.+.+ .+|+.+ |..+|++..+
T Consensus 86 d~~~g~y~~~~s~~~~~~~~~~~~~~i~~~tt~Df~tft~p~~~~~--~~~~~ID~-~v~~~~--g~~Yl~~k~~ 155 (276)
T cd08983 86 DAERGQYVVYWSSRLYDNTGGFYNYRLYATTTSDFVTFTEPKVWID--LGANVIDT-TVVKVG--GTYYRFYKNE 155 (276)
T ss_pred cCCCCeEEEEEecccCCCCCCCccEEEEEEecCcccccCCCeEeec--CCCCeEee-EEEEeC--CEEEEEEecC
Confidence 6558999999988632 2223333334 49999997766653 23346665 566664 4445555433
No 43
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=97.60 E-value=0.001 Score=64.49 Aligned_cols=124 Identities=11% Similarity=-0.022 Sum_probs=78.2
Q ss_pred eEEEEcCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCceee----CCCCCCCCCeecCcceeecCCCcE
Q 012389 15 GSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLV----PPRHIGPKDFRDPTTAWAGPDGKW 90 (464)
Q Consensus 15 Gsa~~~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~----~p~~~~~~~~RDP~V~w~~~~g~~ 90 (464)
.+++. .+|+++|+||+... ......++.|+|+ ++|+..+ .++. ..........-+|.|+. .+|+|
T Consensus 3 P~v~~-~~~~yyl~~t~~~~-~~~~i~i~~S~Dl-----~~W~~~~--~~~~~~~~~~~~~~~~~~waP~v~~--~~g~y 71 (271)
T cd08978 3 PYILR-YNGKYYLYGSTDDA-AGPGVQVWSSKDL-----VNWRYEG--AVFVAWRGRGEAKDSGGLWAPEVIY--YEGKY 71 (271)
T ss_pred CcEEE-ECCEEEEEEecCCc-CCCcEEEEECCcc-----CCcEECC--cccccccccCCcccCCceeCCeEEE--ECCEE
Confidence 45654 68899999999753 1245678899986 8999874 3332 21112245678999944 35999
Q ss_pred EEEEEeec--CCceEEEEEEeCCCCCCeEcceeeecCCCCCceEeceEEEecccCccceeec
Q 012389 91 RLTIGSKI--GKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTS 150 (464)
Q Consensus 91 ~mv~ga~~--~~~g~~~ly~S~Dl~~W~~~g~l~~~~~~~g~wECPdlf~l~~~~~~~l~~~ 150 (464)
||++.+.. .....+.+.+|+|+..|................-.|.+|.-+ +|+.+|+++
T Consensus 72 yl~y~~~~~~~~~~~i~~a~s~d~~g~~~~~~~~~~~~~~~~~iDp~vf~d~-dg~~yl~~~ 132 (271)
T cd08978 72 YLYYSVSDFDYNGSGIGVATSEDPTGPFEDKVIRPPTSNNGNSIDPTVFKDD-DGKYYLYYG 132 (271)
T ss_pred EEEEEcccCCCCcccEEEEECCCCCCCccccccCcCccCCCCccCcceEEcC-CCCEEEEEe
Confidence 99998863 223468889999999986542211111112234579998865 244444444
No 44
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=97.60 E-value=0.00069 Score=71.26 Aligned_cols=111 Identities=14% Similarity=0.122 Sum_probs=75.2
Q ss_pred CCCcEEEEEcccCCC---CeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeecCCCcEEEEEEee
Q 012389 21 PDGQIVMLYTGSTDK---SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 97 (464)
Q Consensus 21 ~~g~~~~~YTg~~~~---~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv~ga~ 97 (464)
.+|+++|||+-+-.. +...-++|+|+|. +||+.. .++|.|...++..+.-++.++. .+++++|++.+.
T Consensus 18 ~~G~yHlFyq~~p~~~~~g~~~Wgha~S~Dl-----v~W~~~--~~aL~P~~~~d~~g~~sGsav~--~~~~~~~~YTg~ 88 (437)
T smart00640 18 YKGKYHLFYQYNPFGPVWGNIHWGHAVSKDL-----VHWTHL--PVALAPDEWYDSNGVFSGSAVI--DPGNLSLLYTGN 88 (437)
T ss_pred ECCEEEEEEecCCCCCCCCCeEEEEEEcCCc-----ceeeec--CcccCCCCcCCCCcEEEEEEEE--CCCceEEEEcCC
Confidence 489999999966322 2345789999996 999986 3566554434445678888733 456789988664
Q ss_pred c-C-------CceEEEEEEeCCCCCCeEc--ceeeecCCC--CCceEeceEEEec
Q 012389 98 I-G-------KTGISLVYQTTDFKTYELL--DEYLHAVPG--TGMWECVDFYPVA 140 (464)
Q Consensus 98 ~-~-------~~g~~~ly~S~Dl~~W~~~--g~l~~~~~~--~g~wECPdlf~l~ 140 (464)
. . .....+.+.|+|+.+|+.. ++++...+. ...|..|.+|.-+
T Consensus 89 ~~~~~~~~~~~~~~~~~ass~d~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~~ 143 (437)
T smart00640 89 VAIDTNVQVQRQAQQLAASDDLGGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWYD 143 (437)
T ss_pred cccccccCcccEEEEEEEECCCCCeeEECCCCcEEeCCCCCCCCCcCCCCccEEC
Confidence 2 1 1123367889999999997 466543332 2368889998765
No 45
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=97.50 E-value=0.0028 Score=62.22 Aligned_cols=115 Identities=17% Similarity=0.149 Sum_probs=75.6
Q ss_pred EEeEEEEcCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeecCCCcEEE
Q 012389 13 WTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRL 92 (464)
Q Consensus 13 ~SGsa~~~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~m 92 (464)
|.+.++. .+|+++|||+.........+.+|+|++.. -.|+... .+.+. .....||.|++ .++|++||
T Consensus 68 WAP~i~~-~~g~yy~y~~~~~~~~~~~~~va~a~~~~----Gp~~~~~-~~~~~------~~~~iD~~vf~-d~dG~~Yl 134 (286)
T PF04616_consen 68 WAPEIHY-INGKYYMYYSDSGGDAGSGIGVATADSPD----GPWTDPG-KIPIP------GGNSIDPSVFV-DDDGKYYL 134 (286)
T ss_dssp EEEEEEE-ETTEEEEEEEEESTSTTEEEEEEEESSTT----S-EEEEE-EEEEE------SSSSSSEEEEE-ETTSEEEE
T ss_pred cCCeEEE-cCCeEEEEEEccCCCCCcceeEEEeCCcc----ccccccc-ceeec------cccccCceEEE-ecCCCcEE
Confidence 9999875 79999999993333334568899998752 4788753 22222 24678999944 46699999
Q ss_pred EEEeecC--CceEEEEEE-eCCCCCCeEcc-eee-ecC--CCCCceEeceEEEec
Q 012389 93 TIGSKIG--KTGISLVYQ-TTDFKTYELLD-EYL-HAV--PGTGMWECVDFYPVA 140 (464)
Q Consensus 93 v~ga~~~--~~g~~~ly~-S~Dl~~W~~~g-~l~-~~~--~~~g~wECPdlf~l~ 140 (464)
+.+.... ..+.+.+.+ ++|...+.... ... ... ...+..|+|.+|+.+
T Consensus 135 ~~~~~~~~~~~~~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~ 189 (286)
T PF04616_consen 135 YYGSWDNGDPGGGIYIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHG 189 (286)
T ss_dssp EEEESTTTSSEEEEEEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEET
T ss_pred eCcccCCCccceeEEeecccCccccccCcccccccccccccCCccccceEEEEcC
Confidence 9988643 234566666 46676666554 222 221 123489999999986
No 46
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.45 E-value=0.00081 Score=66.02 Aligned_cols=69 Identities=14% Similarity=0.309 Sum_probs=47.2
Q ss_pred CCceeeCCCCCCCCCeecCcceeecCCCcEEEEEEeecCCceEEEEEEeCCCCCCeEcceeeecCC--------------
Q 012389 61 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVP-------------- 126 (464)
Q Consensus 61 ~~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv~ga~~~~~g~~~ly~S~Dl~~W~~~g~l~~~~~-------------- 126 (464)
.||||. ..+.||.| .+ .++.|||+....... ..+.+|+|+||++|+..+..+....
T Consensus 3 ~NPv~~-------~~~~DP~v-~~-~~~~yY~~~t~~~~~-~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~ 72 (269)
T cd09001 3 TNPIIY-------ADYPDPDV-IR-VGDDYYMVSTTMHYS-PGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAY 72 (269)
T ss_pred cCCccC-------CCCCCCeE-EE-ECCEEEEEECCcccC-CCCEEEEcccccCCeEcccccccccccccccccccCCCC
Confidence 378874 25689999 54 468999997553221 2378999999999999986543110
Q ss_pred CCCceEeceEEEec
Q 012389 127 GTGMWECVDFYPVA 140 (464)
Q Consensus 127 ~~g~wECPdlf~l~ 140 (464)
..++| -|+++..+
T Consensus 73 ~~~~W-AP~v~~~~ 85 (269)
T cd09001 73 GKGQW-APSLRYHN 85 (269)
T ss_pred CCCEE-CCceEEEC
Confidence 11245 79988874
No 47
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=97.37 E-value=0.0015 Score=63.74 Aligned_cols=118 Identities=12% Similarity=0.116 Sum_probs=76.2
Q ss_pred eEEEEcCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCcee---eCCCCCCCCCeecCcceeecCCCcEE
Q 012389 15 GSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVL---VPPRHIGPKDFRDPTTAWAGPDGKWR 91 (464)
Q Consensus 15 Gsa~~~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi---~~p~~~~~~~~RDP~V~w~~~~g~~~ 91 (464)
.+++ ..+|+++||||.....+.....+|+|+|+ ++|+..+ ..+. .+........+-.|.|++. ++|+|+
T Consensus 3 P~i~-~~~g~yyl~~~~~~~~~~~~~~~~~S~Dl-----~~W~~~~-~~~~~~~~~~~~~~~~~~wap~v~~~-~~g~~~ 74 (286)
T cd08772 3 PNLI-KYNGTYYIFFSGDDKNGNPGIAHATSKDL-----VNWTDHP-VALVWWARRGGPKDSGGIWAPSIVYI-ENGKFY 74 (286)
T ss_pred CeEE-EECCEEEEEEEccCCCCCceEEEEECCCc-----CcceECC-ccchhhcccCCCCCCCcEecceEEEc-CCCCEE
Confidence 3544 36899999999876434456789999996 9999975 3332 1222234567889999553 449999
Q ss_pred EEEEeec--CCceEEEEEEeCCCCC-CeEcce--eeec-CC--CCCceEeceEEEec
Q 012389 92 LTIGSKI--GKTGISLVYQTTDFKT-YELLDE--YLHA-VP--GTGMWECVDFYPVA 140 (464)
Q Consensus 92 mv~ga~~--~~~g~~~ly~S~Dl~~-W~~~g~--l~~~-~~--~~g~wECPdlf~l~ 140 (464)
|++.+.. .....+.+.+|+|+.. |+..+. +... .. ....+.-|.+|+-+
T Consensus 75 l~yt~~~~~~~~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~ 131 (286)
T cd08772 75 LYYTDVSFTKNQQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDD 131 (286)
T ss_pred EEEEeecCCCCceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcC
Confidence 9998863 2345788999999864 554432 1111 11 11245667887764
No 48
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=97.35 E-value=0.0018 Score=64.92 Aligned_cols=126 Identities=13% Similarity=0.212 Sum_probs=77.2
Q ss_pred CCEEEeEEEEcCC----CcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCC-CCCCC-CCeecCccee
Q 012389 10 NGVWTGSATILPD----GQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-RHIGP-KDFRDPTTAW 83 (464)
Q Consensus 10 ~Gv~SGsa~~~~~----g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p-~~~~~-~~~RDP~V~w 83 (464)
.++|.+.++. .+ |+++|||+.. ...+++|+|++- . -.|+.....|++... ++... ....||.||+
T Consensus 76 ~~~WAP~v~~-~~~~~~gkyylyy~~~----~~~igva~SdsP---~-GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~ 146 (311)
T cd09003 76 GNSWAPSIAV-KKINGKGKFYLYFANG----GGGIGVLTADSP---V-GPWTDPLGKPLITGSTPGCAGVVWLFDPAVFV 146 (311)
T ss_pred cccCCCceEE-eccCCCCEEEEEEecC----CCeEEEEEcCCC---C-CCcccCCCCeeecCCCCCccCCccccCCCeEE
Confidence 3789999875 56 9999999864 234789998763 2 368875456777532 22211 2247999955
Q ss_pred ecCCCcEEEEEEeecC-----CceEEEEEEe-CCCCCCeEcceeeecCCCCCceEeceEEEecccCccceeec
Q 012389 84 AGPDGKWRLTIGSKIG-----KTGISLVYQT-TDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTS 150 (464)
Q Consensus 84 ~~~~g~~~mv~ga~~~-----~~g~~~ly~S-~Dl~~W~~~g~l~~~~~~~g~wECPdlf~l~~~~~~~l~~~ 150 (464)
.++|++||+.|+... ..+.+.+.+- +|+.+- .++...- ...+.+|.|.+|+-+ |..+|++|
T Consensus 147 -DdDG~~Yl~~g~~~~~~~~~~~~~i~i~~l~~D~~~~--~g~~~~i-~~~~~~Egp~~~K~~--G~YYL~ys 213 (311)
T cd09003 147 -DDDGQGYLYFGGGVPGGRWANPNTARVIKLGDDMISV--DGSAVTI-DAPYFFEASGLHKIN--GTYYYSYC 213 (311)
T ss_pred -CCCCCEEEEECCccCCCccccCCCEEEEEeCCCceec--cCCceEc-cCCCceEeeeEEEEC--CEEEEEEe
Confidence 478999999986321 1234555553 466443 2332211 011479999999985 44444444
No 49
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.29 E-value=0.0029 Score=62.58 Aligned_cols=116 Identities=22% Similarity=0.255 Sum_probs=72.0
Q ss_pred CCCCEEEeEEEEcCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeecCC
Q 012389 8 DINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPD 87 (464)
Q Consensus 8 D~~Gv~SGsa~~~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~~ 87 (464)
...++|.+.++. .+|+++|||++........+.+|+|+|-. -.|+. |++.. ....||.|++ .++
T Consensus 64 ~~~~~WAP~v~~-~~g~yy~yy~~~~~~~~~~~~v~~s~~p~----gpw~~----~~~~~------~~~iDp~vf~-d~d 127 (288)
T cd09000 64 DSGGIWAPTIRY-HDGTFYLITTNVDGMKDGGNFIVTADDPA----GPWSD----PVWLD------SGGIDPSLFF-DDD 127 (288)
T ss_pred CCCceEcceEEE-ECCEEEEEEEecCCCCCCceEEEEeCCCC----CCCcC----CEecC------CCccCCceeE-cCC
Confidence 356799999976 69999999999764333456788886642 24542 33321 2568999955 468
Q ss_pred CcEEEEEEeecC-----CceEEEEEEeCCCCCCeEcceee--ecCCCCCceEeceEEEec
Q 012389 88 GKWRLTIGSKIG-----KTGISLVYQTTDFKTYELLDEYL--HAVPGTGMWECVDFYPVA 140 (464)
Q Consensus 88 g~~~mv~ga~~~-----~~g~~~ly~S~Dl~~W~~~g~l~--~~~~~~g~wECPdlf~l~ 140 (464)
|++||+.+.... ..+.+.+.+. |...|+..+... .........|+|.+|+.+
T Consensus 128 G~~Y~~~~~~~~~~~~~~~~~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~ 186 (288)
T cd09000 128 GKVYLVGNGWDERRGYNGHGGIWLQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRD 186 (288)
T ss_pred CCEEEEecccCCccccCCCCcEEEEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEEC
Confidence 999999876421 1234555544 334555544321 111112378999999985
No 50
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=97.27 E-value=0.0037 Score=61.82 Aligned_cols=94 Identities=13% Similarity=0.086 Sum_probs=67.0
Q ss_pred EeEEEEcCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCC-------CCCCCeecCcceeecC
Q 012389 14 TGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRH-------IGPKDFRDPTTAWAGP 86 (464)
Q Consensus 14 SGsa~~~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~-------~~~~~~RDP~V~w~~~ 86 (464)
..+++. .+|+++||+|.. ...++.|+|. .+|+..+ .++..++. .....+-.|.| .+ .
T Consensus 3 DP~v~~-~~~~yyl~~t~~------~i~i~~S~Dl-----~~W~~~g--~~~~~~~~~~~~~~~~~~~~~wAP~v-~~-~ 66 (288)
T cd08998 3 DPSIIK-EGDTYYLFSTGN------GIAIAKSKDL-----GNWTYVG--SVFPTGPPWWSSIDPGGSGNLWAPDV-IY-L 66 (288)
T ss_pred CCeEEE-ECCEEEEEEcCC------CeEEEECCCC-----CCcEECC--ccccCCCccccccccCCCCCccCCeE-EE-E
Confidence 346654 688999999985 4678999986 8999863 34443221 12356778998 54 4
Q ss_pred CCcEEEEEEeecC--CceEEEEEEeCCC--CCCeEcceeee
Q 012389 87 DGKWRLTIGSKIG--KTGISLVYQTTDF--KTYELLDEYLH 123 (464)
Q Consensus 87 ~g~~~mv~ga~~~--~~g~~~ly~S~Dl--~~W~~~g~l~~ 123 (464)
+|+|||++.+... ...++.+.+|+|+ -.|+..+++..
T Consensus 67 ~g~yyl~ys~~~~~~~~~~i~va~s~~~~~gpw~~~~~v~~ 107 (288)
T cd08998 67 NGKYYLYYSVSTFGSNRSAIGLATSDTLPDGPWTDHGIVIE 107 (288)
T ss_pred CCEEEEEEEEEeCCCCceEEEEEEeCCCCCCCCEEcceeee
Confidence 8999999987632 3346788999998 68999887654
No 51
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=97.21 E-value=0.00064 Score=66.32 Aligned_cols=106 Identities=25% Similarity=0.362 Sum_probs=76.7
Q ss_pred CCC-CCccCCCCEEEeEEEEcCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecC
Q 012389 1 MVP-DQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDP 79 (464)
Q Consensus 1 l~P-~~~~D~~Gv~SGsa~~~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP 79 (464)
++| ..++|..||....++. .+++++|.|||....+ +..++|+++|. .+|+|.+ +++. | ++||-
T Consensus 83 ~~P~~~~~e~~G~EDPRvt~-I~~~y~mtYTa~s~~g-~~~~la~t~~f-----~n~~rig--~i~~-p------dn~~~ 146 (314)
T COG2152 83 LWPANYPYEIYGIEDPRVTK-IGGRYYMTYTAYSDKG-PRLALAVTKDF-----LNWERIG--AIFP-P------DNKDA 146 (314)
T ss_pred EecCCCchhhhcccCceEEE-ECCEEEEEEEecCCCC-cccchhhhhhh-----hhhhhcc--cccC-C------CCCCc
Confidence 357 6688999999999985 7999999999997544 67899999996 8899963 4433 2 23454
Q ss_pred cceeecCCCcEEEEEEeec---CCceEEEEEEeCCCCCCeEcceee
Q 012389 80 TTAWAGPDGKWRLTIGSKI---GKTGISLVYQTTDFKTYELLDEYL 122 (464)
Q Consensus 80 ~V~w~~~~g~~~mv~ga~~---~~~g~~~ly~S~Dl~~W~~~g~l~ 122 (464)
.++=+.-+|+|.|+.--.. ...+.+.+-.|.||.+|...-.+.
T Consensus 147 ~lfP~~~ngk~~~lhr~~~~~~~~~~niwia~S~dl~~w~~~~~~l 192 (314)
T COG2152 147 ALFPKKINGKYALLHRPVLGEYGMKGNIWIAFSPDLEHWGIHRKLL 192 (314)
T ss_pred eEeeEEecCcEEEEEeecccccCccCceEEEEcCCccCCCccceee
Confidence 4411124688999865331 224689999999999998875543
No 52
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.20 E-value=0.0037 Score=61.90 Aligned_cols=68 Identities=19% Similarity=0.295 Sum_probs=45.8
Q ss_pred CceeeCCCCCCCCCeecCcceeecCCCcEEEEEEeecCCceEEEEEEeCCCCCCeEcceeeecCC--------CCC-ceE
Q 012389 62 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVP--------GTG-MWE 132 (464)
Q Consensus 62 ~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv~ga~~~~~g~~~ly~S~Dl~~W~~~g~l~~~~~--------~~g-~wE 132 (464)
|||+. ..++||.| .+ .++.|||+.+..... ..+.+|+|+||++|++.+.++.... ..+ +|
T Consensus 1 NPv~~-------~~~~DP~i-~~-~~~~yy~~~t~~~~~-~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~W- 69 (288)
T cd09000 1 NPILP-------GFYPDPSI-CR-VGDDYYLVTSSFEYF-PGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIW- 69 (288)
T ss_pred CCcCC-------CCCCCCCE-EE-ECCEEEEEECCcccC-CCceEEECCCcCCcEEcccccCCcccccccCCCCCCceE-
Confidence 67763 24699999 65 468899884332211 2478999999999999987653110 112 45
Q ss_pred eceEEEec
Q 012389 133 CVDFYPVA 140 (464)
Q Consensus 133 CPdlf~l~ 140 (464)
-|+++..+
T Consensus 70 AP~v~~~~ 77 (288)
T cd09000 70 APTIRYHD 77 (288)
T ss_pred cceEEEEC
Confidence 69998874
No 53
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=97.02 E-value=0.0076 Score=63.58 Aligned_cols=110 Identities=10% Similarity=0.118 Sum_probs=72.6
Q ss_pred CCCcEEEEEcccCCC---CeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeecCCCcEEEEEEee
Q 012389 21 PDGQIVMLYTGSTDK---SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 97 (464)
Q Consensus 21 ~~g~~~~~YTg~~~~---~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv~ga~ 97 (464)
.+|+++|||.-+-.. +...-++|+|+|. +||+.. .++|.|...++...+-.+.+ .. .+|+++|++.+.
T Consensus 35 ~~G~yHlfyq~~p~~~~~g~~~Wgha~S~Dl-----v~W~~~--~~al~P~~~~d~~G~~sGsa-v~-~~g~~~l~YTg~ 105 (445)
T TIGR01322 35 FKGEYHLFYQWFPFGPVHGLKSWGHYTSKDL-----VHWEDE--GVALAPDDPYDSHGCYSGSA-VD-NNGQLTLMYTGN 105 (445)
T ss_pred ECCEEEEEEccCCCCCccCceEEEEEECCCc-----cccEEC--CccCcCCCcccCCceEECeE-Ee-eCCEEEEEEecc
Confidence 489999999875321 3345689999996 999997 35665543344556778988 44 578999998774
Q ss_pred c----C-CceEEEEEEeCCCCCCeEcc-eeeecCCCC--CceEeceEEEe
Q 012389 98 I----G-KTGISLVYQTTDFKTYELLD-EYLHAVPGT--GMWECVDFYPV 139 (464)
Q Consensus 98 ~----~-~~g~~~ly~S~Dl~~W~~~g-~l~~~~~~~--g~wECPdlf~l 139 (464)
. . ......+..|+|+.+|+..+ +++...+.. ..|.=|..|+-
T Consensus 106 ~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~~~~~~~~fRDP~V~~~ 155 (445)
T TIGR01322 106 VRDSDWNRESYQCLATMDDDGHFEKFGIVVIELPPAGYTAHFRDPKVWKH 155 (445)
T ss_pred ccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCCCCCCcCcCCCCcEEeE
Confidence 2 1 11234577899999999877 454432211 14556777764
No 54
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=96.90 E-value=0.0036 Score=61.48 Aligned_cols=69 Identities=16% Similarity=0.198 Sum_probs=48.2
Q ss_pred CceeeCCCCCCCCCeecCcceeecCCCcEEEEEEeecC--CceEEEEEEeCCCCCCeEcceeeecC-C---CCCceEece
Q 012389 62 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG--KTGISLVYQTTDFKTYELLDEYLHAV-P---GTGMWECVD 135 (464)
Q Consensus 62 ~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv~ga~~~--~~g~~~ly~S~Dl~~W~~~g~l~~~~-~---~~g~wECPd 135 (464)
||||. ..++||.|+ + .+|+|||+...... ....+.+|+|+||.+|+..+.++... . ..++| .|+
T Consensus 1 NPv~~-------g~~~DP~i~-~-~~g~yY~~~t~~~~~~~~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~w-AP~ 70 (275)
T cd09004 1 NPILP-------GWYADPEIR-I-FGGTYYIYPTSDGAGGEQTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAW-APS 70 (275)
T ss_pred CCcCC-------CCCCCCCeE-E-ECCEEEEEEeccCCCCCeeEEEEEECCCCCCceECcccccccCCcccCCCcC-CCe
Confidence 67763 247999994 4 46899998544321 12468899999999999999866421 1 12355 899
Q ss_pred EEEec
Q 012389 136 FYPVA 140 (464)
Q Consensus 136 lf~l~ 140 (464)
++..+
T Consensus 71 v~~~~ 75 (275)
T cd09004 71 VIERN 75 (275)
T ss_pred EEEEC
Confidence 99986
No 55
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=96.86 E-value=0.011 Score=58.34 Aligned_cols=56 Identities=14% Similarity=0.303 Sum_probs=40.4
Q ss_pred ecCcceeecCCCcEEEEEEeecCCceEEEEEEeCCCCCCeEcceeeecCC----------CCCceEeceEEEec
Q 012389 77 RDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVP----------GTGMWECVDFYPVA 140 (464)
Q Consensus 77 RDP~V~w~~~~g~~~mv~ga~~~~~g~~~ly~S~Dl~~W~~~g~l~~~~~----------~~g~wECPdlf~l~ 140 (464)
.||.| .+ .++.|||+.... .+.+|+|+||++|+..+..+...+ ..++| -|++...+
T Consensus 1 ~DP~v-i~-~~~~YY~~~T~~-----g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~W-AP~v~~~~ 66 (279)
T cd08988 1 HDPVI-IK-EGDTWYVFGTGP-----GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLW-APDIYQHN 66 (279)
T ss_pred CCCEE-EE-ECCEEEEEEecC-----CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEe-cceEEEEC
Confidence 39999 55 467899985431 378999999999999988653211 11356 79999886
No 56
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=96.61 E-value=0.038 Score=54.46 Aligned_cols=124 Identities=17% Similarity=0.182 Sum_probs=72.3
Q ss_pred CCCEEEeEEEEcCCCcEEEEEcccCCC-CeeeEEEEEeCCCCCCCc-ceEEEcCCCceeeCCCCCCCCCeecCcceeecC
Q 012389 9 INGVWTGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLL-LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGP 86 (464)
Q Consensus 9 ~~Gv~SGsa~~~~~g~~~~~YTg~~~~-~~~~q~lA~S~D~gd~~l-~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~ 86 (464)
..++|...++. .+|+++|||++.... ....+++|+|++-..+.- ..|+. ..|++.+... .....-||.+++ ++
T Consensus 54 ~~~~WAP~v~~-~~G~yylyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~~~-~~~~~iDp~~f~-Dd 128 (279)
T cd08988 54 DGHLWAPDIYQ-HNGKFYLYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSDAS-DNYNAIDPAIIF-DQ 128 (279)
T ss_pred CCCEecceEEE-ECCEEEEEEEeccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecCCC-CCCCccCCceEE-cC
Confidence 46899999975 689999999987532 245678999986421210 12443 2466654221 123457999955 47
Q ss_pred CCcEEEEEEeecCCceEEEEEE-eCCCCCCeEcce---eeecCCCCCceEeceEEEec
Q 012389 87 DGKWRLTIGSKIGKTGISLVYQ-TTDFKTYELLDE---YLHAVPGTGMWECVDFYPVA 140 (464)
Q Consensus 87 ~g~~~mv~ga~~~~~g~~~ly~-S~Dl~~W~~~g~---l~~~~~~~g~wECPdlf~l~ 140 (464)
+|++||+.|+.. .| +.+.+ +.|+..-...+. +.......+..|-|-+++-+
T Consensus 129 DG~~Yl~~g~~~--~g-i~~~eL~~d~~~~~~~~~~~~i~~~~~~~~~~Egp~i~k~~ 183 (279)
T cd08988 129 HGQPWLSFGSFW--GG-IKLFELDKDTMKPAEPGELHSIAGRERSSAAIEAPFILYRG 183 (279)
T ss_pred CCCEEEEecccC--CC-EEEEEECcccCCccCCCcceEEeccCCCCCceEeeEEEEcC
Confidence 899999988632 12 33444 445443211122 11111112368999999875
No 57
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=96.58 E-value=0.045 Score=53.59 Aligned_cols=66 Identities=14% Similarity=0.004 Sum_probs=45.5
Q ss_pred CeecCcceeecCCCcEEEEEEeec---CCceEEEEEEeCCCCCCeEcceeeecCC---C---CCceEeceEEEeccc
Q 012389 75 DFRDPTTAWAGPDGKWRLTIGSKI---GKTGISLVYQTTDFKTYELLDEYLHAVP---G---TGMWECVDFYPVAIN 142 (464)
Q Consensus 75 ~~RDP~V~w~~~~g~~~mv~ga~~---~~~g~~~ly~S~Dl~~W~~~g~l~~~~~---~---~g~wECPdlf~l~~~ 142 (464)
+..||.| .+ .+++|||+-.... ...+.+.+|+|+||.+|+..+.++.... . ....|-|+++.-+..
T Consensus 2 ~ah~~~i-~~-~~~~yY~ygs~~~~~~~~~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~ 76 (265)
T cd08985 2 QAHGGGI-LK-VGGTYYWYGENKGGGDTAFGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKT 76 (265)
T ss_pred ccccCce-EE-ECCEEEEEEEecCCCCcccccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCC
Confidence 3568888 55 4678888844432 1234688999999999999998774322 1 125678999887633
No 58
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=96.46 E-value=0.1 Score=51.48 Aligned_cols=121 Identities=11% Similarity=0.090 Sum_probs=73.1
Q ss_pred CCCCEEEeEEEEcCCCcEEEEEcccCC--CCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeec
Q 012389 8 DINGVWTGSATILPDGQIVMLYTGSTD--KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAG 85 (464)
Q Consensus 8 D~~Gv~SGsa~~~~~g~~~~~YTg~~~--~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~ 85 (464)
...++|.+.+.. .+|+++|+|+.... ...+..++|.+++..++ +-.|+.. .+++.. .+ ...-||.+ +..
T Consensus 51 ~~~~~WAP~i~~-~~g~yylyys~~~~~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~-~~---~~~iDp~~-~~d 121 (288)
T cd08980 51 YSGNLWAPELHY-IDGKWYIYFAAGDGGGNANHRMYVLENAGADPP-TGPWTFK--GRLADP-TD---RWAIDGTV-FEH 121 (288)
T ss_pred ccccEECceEEE-ECCEEEEEEEccCCCCCcceeEEEEEeCCCCCC-CCCceEe--eEeccC-CC---CeeeeeEE-EEE
Confidence 456799999875 69999999998764 23456678888752112 2478874 344322 11 24579999 553
Q ss_pred CCCcEEEEEEeec---CCceEEEEEEeCCCCCCeEcce--eeecCC----C--CCceEeceEEEec
Q 012389 86 PDGKWRLTIGSKI---GKTGISLVYQTTDFKTYELLDE--YLHAVP----G--TGMWECVDFYPVA 140 (464)
Q Consensus 86 ~~g~~~mv~ga~~---~~~g~~~ly~S~Dl~~W~~~g~--l~~~~~----~--~g~wECPdlf~l~ 140 (464)
+|++||+++... .....+.+.+..+...+. +. .+.... . .+..|-|.+++.+
T Consensus 122 -dG~~Yl~~~~~~~~~~~~~~i~~~~l~~~~~~~--g~~~~i~~p~~~we~~~~~~~EgP~~~k~~ 184 (288)
T cd08980 122 -NGQLYFVWSGWEGRTNGNQNLYIAKMSNPWTLT--GPRVLISRPEYDWERQGPGVNEGPAALKRN 184 (288)
T ss_pred -CCEEEEEEEccCCCCCCCccEEEEECCCCCccC--CcceEecCCCCCceecCceeeECcEEEEEC
Confidence 599999987542 122346566655543443 32 111111 1 1357999999996
No 59
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=96.12 E-value=0.01 Score=59.48 Aligned_cols=70 Identities=14% Similarity=0.141 Sum_probs=47.2
Q ss_pred CceeeCCCCCCCCCeecCcceeecCCCcEEEEEEeecC-------------CceEEEEEEeCCCCCCeEcceeeec--CC
Q 012389 62 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-------------KTGISLVYQTTDFKTYELLDEYLHA--VP 126 (464)
Q Consensus 62 ~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv~ga~~~-------------~~g~~~ly~S~Dl~~W~~~g~l~~~--~~ 126 (464)
||||.. ...-||.| .. .+|.|||+...... ....+.+|+|+||++|+..+.++.. ..
T Consensus 1 NPi~~~------~~~aDP~~-~~-~~g~yY~~~t~~~~~~~~~~~~~~~~~~~~~i~v~~S~DL~~W~~~g~v~~~~~~~ 72 (311)
T cd09003 1 NPIIDH------RYGADPTA-VV-YNGRVYVYTTNDDYEYDSNTIKDNNYYNINDITVISSDDMVNWTDHGEIFVPNGIA 72 (311)
T ss_pred CCccCC------CccCCCCe-EE-ECCEEEEEeCCCCccccccccccCCccccCcEEEEECCCCCCcEEcccccCcCCCC
Confidence 677732 12389999 44 47899998654211 0125889999999999999987741 11
Q ss_pred C--CCceEeceEEEec
Q 012389 127 G--TGMWECVDFYPVA 140 (464)
Q Consensus 127 ~--~g~wECPdlf~l~ 140 (464)
. .++| -|++++.+
T Consensus 73 ~w~~~~W-AP~v~~~~ 87 (311)
T cd09003 73 KWAGNSW-APSIAVKK 87 (311)
T ss_pred CcccccC-CCceEEec
Confidence 1 2367 69999875
No 60
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=95.97 E-value=0.12 Score=51.29 Aligned_cols=79 Identities=16% Similarity=0.148 Sum_probs=52.4
Q ss_pred cCCCCEEEeEEEEcCCCcEEEEEcccCCC-CeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeec
Q 012389 7 YDINGVWTGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAG 85 (464)
Q Consensus 7 ~D~~Gv~SGsa~~~~~g~~~~~YTg~~~~-~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~ 85 (464)
+-..++|...++. .+|+++|||+..... ....+.+|+|++- . --|+.....|+.. . ....-||.+ |..
T Consensus 63 ~~~~~~WAP~v~~-~~G~yyly~s~~~~~~~~~~~~va~s~~p---~-GP~~~~~~~~~~~--~---~~~~iDp~~-f~D 131 (291)
T cd08981 63 WADDNFWAPEVHE-YKGRYYMFATFHNPGGERRGTAILVSDSP---E-GPFVPHSDGPVTP--E---DWMCLDGTL-YVD 131 (291)
T ss_pred CccccccCCeeee-eCCEEEEEEEeccCCCceeeEEEEECCCC---C-CCCEeCCCCccCC--C---CCceEcCce-EEc
Confidence 3456789999864 799999999876543 2234678888653 2 2577643334422 1 134689999 545
Q ss_pred CCCcEEEEEEe
Q 012389 86 PDGKWRLTIGS 96 (464)
Q Consensus 86 ~~g~~~mv~ga 96 (464)
++|++||+.+.
T Consensus 132 dDG~~Yl~~~~ 142 (291)
T cd08981 132 EDGKPWMVFCH 142 (291)
T ss_pred CCCCEEEEEEe
Confidence 68999999874
No 61
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=95.92 E-value=0.18 Score=50.54 Aligned_cols=111 Identities=13% Similarity=0.087 Sum_probs=69.4
Q ss_pred CCCcEEEEEcccCCC---CeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeecCCCcEEEEEEee
Q 012389 21 PDGQIVMLYTGSTDK---SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 97 (464)
Q Consensus 21 ~~g~~~~~YTg~~~~---~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv~ga~ 97 (464)
.+|+++|||--+-.. +...-+.|+|+|. +||+.. .++|.+...++....--..++. .+++++|++.+.
T Consensus 18 ~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dl-----v~W~~~--~~aL~P~~~~d~~g~~SGs~~~--~~~~~~~~YTg~ 88 (308)
T PF00251_consen 18 YDGKYHLFYQYNPFGPEWGNMHWGHATSKDL-----VHWEHL--PVALPPDEEYDADGCFSGSAVV--DDDNLVLFYTGN 88 (308)
T ss_dssp ETTEEEEEEEEETTSSSS-SBEEEEEEESSS-----SSEEEE--EEEE-SSSGGGTTEEEEEEEEE--ETTCEEEEEEEE
T ss_pred eCCEEEEEeccCCCCcccceeEEEEEECCCC-----CCceeC--CceEcccccCCcCccCcceEEE--ECCEEEEEEecc
Confidence 699999999766422 2455689999996 999997 3666654323223344444423 345799998776
Q ss_pred c-CCceEEEEEEe-CCCCCCeEc---ceeeec-CC-CCCceEeceEEEec
Q 012389 98 I-GKTGISLVYQT-TDFKTYELL---DEYLHA-VP-GTGMWECVDFYPVA 140 (464)
Q Consensus 98 ~-~~~g~~~ly~S-~Dl~~W~~~---g~l~~~-~~-~~g~wECPdlf~l~ 140 (464)
. +......+..| +|..+|+.. .+++.. .. ....|-=|-+|-..
T Consensus 89 ~~~~~~~q~~A~s~d~~~~w~k~~~~~pvi~~~p~~~~~~~RDP~v~~~~ 138 (308)
T PF00251_consen 89 NRDGKQVQCLAYSTDDGITWTKYPQGNPVIPEPPPGDTTDFRDPKVFWRE 138 (308)
T ss_dssp ETTTEEEEEEEEESSTTSSEEE-TTTCESBESSSTTSCTSEEEEEEEEEC
T ss_pred CCCCCeEEEEEEECCCCCceEEcCCCCcEEEecccCCCCccccCeEEEec
Confidence 3 22445556667 889999984 455543 22 22367778886554
No 62
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=95.75 E-value=0.058 Score=52.87 Aligned_cols=96 Identities=10% Similarity=0.097 Sum_probs=65.2
Q ss_pred EEEEcCCCcEEEEEcccCCCC------eeeEEEEEeCCCCCCCcceEEEcCCCceeeCCC--CCCCCCeecCcceeecCC
Q 012389 16 SATILPDGQIVMLYTGSTDKS------VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR--HIGPKDFRDPTTAWAGPD 87 (464)
Q Consensus 16 sa~~~~~g~~~~~YTg~~~~~------~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~--~~~~~~~RDP~V~w~~~~ 87 (464)
+++. .+|++++|+|...... .....++.|+|. ++|+.. +.|+...+ ......+--|.| .+ .+
T Consensus 4 ~~~~-~~~~yy~~~t~~~~~~~~~~~~~~~~~v~~S~Dl-----~~W~~~--g~~l~~~~~~~~~~~~~wAP~i-~~-~~ 73 (274)
T cd08990 4 AAHV-FNGRVYIYTSHDEAGGGGDDFCMNDYHVFSSPDL-----VNWTDH--GVILSVTDFPAWAKGQAWAPDV-VE-KN 73 (274)
T ss_pred CcEE-ECCEEEEEeCCCCCCCCCCccccceEEEEECCCC-----CCcEEC--cccccCCCCCccccCCcCcCeE-EE-EC
Confidence 4554 5899999888764322 123678889885 999985 45665321 123456778998 43 47
Q ss_pred CcEEEEEEeec-CCceEEEEEEeCCCC-CCeEccee
Q 012389 88 GKWRLTIGSKI-GKTGISLVYQTTDFK-TYELLDEY 121 (464)
Q Consensus 88 g~~~mv~ga~~-~~~g~~~ly~S~Dl~-~W~~~g~l 121 (464)
|+|||++.+.. .....+.+.+|+|.. .|+..+..
T Consensus 74 g~yy~yy~~~~~~~~~~igva~s~~p~Gpw~~~~~~ 109 (274)
T cd08990 74 GKYYLYFPARDKDGGFAIGVAVSDSPAGPFKDAGGP 109 (274)
T ss_pred CEEEEEEEeecCCCceEEEEEEeCCCCCCCCCCCCc
Confidence 89999988763 233468889999965 79987764
No 63
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=95.53 E-value=0.1 Score=51.14 Aligned_cols=114 Identities=18% Similarity=0.218 Sum_probs=69.7
Q ss_pred CCCEEEeEEEEcCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeecCCC
Q 012389 9 INGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDG 88 (464)
Q Consensus 9 ~~Gv~SGsa~~~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~~g 88 (464)
..++|...++. .+|+++|+|+... ..+.+|+|++-- --|+.. .++ ....||.|++ +++|
T Consensus 73 ~~~~WAP~v~~-~~gkyy~yys~~~----~~~~v~~a~~p~----Gpw~~~--~~~---------~~~iDp~~f~-D~dG 131 (269)
T cd09001 73 GKGQWAPSLRY-HNGTFYVFFCTNT----GGTYIYTADDPE----GPWTKT--ALD---------GGYHDPSLLF-DDDG 131 (269)
T ss_pred CCCEECCceEE-ECCEEEEEEEecC----CCeEEEEcCCCC----CCCcCC--CcC---------CCcccCceEE-cCCC
Confidence 35789999875 6999999999862 246788876531 235432 111 1458999955 4789
Q ss_pred cEEEEEEeecCCceEEEEEE-eCCCCCCeEcce-eeecCC-CCCceEeceEEEecccCccceeec
Q 012389 89 KWRLTIGSKIGKTGISLVYQ-TTDFKTYELLDE-YLHAVP-GTGMWECVDFYPVAINGSVGLDTS 150 (464)
Q Consensus 89 ~~~mv~ga~~~~~g~~~ly~-S~Dl~~W~~~g~-l~~~~~-~~g~wECPdlf~l~~~~~~~l~~~ 150 (464)
+.||+.+.. .+.+.+ +.|+....-... ++.... ..+..|-|.+++-+ |..+|++|
T Consensus 132 ~~Yl~~~~~-----~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--G~YYl~~S 189 (269)
T cd09001 132 TAYLVYGGG-----TIRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN--GYYYIFNI 189 (269)
T ss_pred CEEEEeCCC-----cEEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC--CEEEEEEe
Confidence 999998753 244444 567666522122 222211 12378999999864 44444444
No 64
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=95.28 E-value=0.2 Score=49.06 Aligned_cols=120 Identities=20% Similarity=0.225 Sum_probs=69.7
Q ss_pred CCCEEEeEEEEcCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeecCCC
Q 012389 9 INGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDG 88 (464)
Q Consensus 9 ~~Gv~SGsa~~~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~~g 88 (464)
..++|.+.++. .+|+++|+|+.........+.+|+|++-. --|+. |+... ....||.|++ .++|
T Consensus 65 ~~~~WAP~v~~-~~G~yy~yy~~~~~~~~~~i~va~sd~~~----Gpw~~----~~~~~------~~~IDp~~f~-D~dG 128 (269)
T cd08989 65 SGGIWAPCLSY-YDGKFWLIYTAVKVWKDCHNYLFTAEDIT----GPWSR----PIFLN------YGGFDPSLFH-DDDG 128 (269)
T ss_pred CCcEEcceEEE-ECCEEEEEEeccccCCCceEEEEEECCCC----CCCcC----CEECC------CCcccCceEE-cCCC
Confidence 45799999875 79999999998754333457889886632 13542 44321 2458999944 4789
Q ss_pred cEEEEEEeecCCceEEEEEE-eCCCCC--CeEcceeeecCCCCCceEeceEEEecccCccceeec
Q 012389 89 KWRLTIGSKIGKTGISLVYQ-TTDFKT--YELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTS 150 (464)
Q Consensus 89 ~~~mv~ga~~~~~g~~~ly~-S~Dl~~--W~~~g~l~~~~~~~g~wECPdlf~l~~~~~~~l~~~ 150 (464)
+.||+.+.. +.+.+.+ +.|+.. -+...............|-|.+|+-+ |..+|++|
T Consensus 129 ~~Yl~~~~~----~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~--G~YYl~~S 187 (269)
T cd08989 129 KKYLINMGW----SGIRLQEYSPAEKKLIGKPLNKVIIKGTDDGLTEGPHLYKIN--GKYYLTTA 187 (269)
T ss_pred CEEEEecCC----CcEEEEEEChhhCCCCCCceeEEEecCCCCCccccceEEEEC--CEEEEEEe
Confidence 999998742 1233444 233211 00000011111122378999999875 44455544
No 65
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=94.89 E-value=0.36 Score=47.64 Aligned_cols=96 Identities=15% Similarity=0.132 Sum_probs=61.2
Q ss_pred eEEEEcCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCC-CCCCCeecCcceeecCCCcEEEE
Q 012389 15 GSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRH-IGPKDFRDPTTAWAGPDGKWRLT 93 (464)
Q Consensus 15 Gsa~~~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~-~~~~~~RDP~V~w~~~~g~~~mv 93 (464)
.+++. .++.++|++|+.. ....++.|+|. ++|+.....++..++.. .....+==|.| .+ .+|+|||.
T Consensus 3 P~v~~-~~d~yY~~~T~~~----~~~~i~~S~dl-----~~w~~~~~~~~~~~~~~~~~~~~~WAP~i-~~-~~g~yyly 70 (288)
T cd08980 3 PWVIR-HDGYYYFTATTGE----DRIELRRSDTL-----AGLATAESKVVWTPPDSGPYSGNLWAPEL-HY-IDGKWYIY 70 (288)
T ss_pred CeEEE-ECCEEEEEEEeCC----CcEEEEecCCh-----hHhhcCCcEEEecCCCCCCccccEECceE-EE-ECCEEEEE
Confidence 35654 5778999998753 45779999985 89998643334333211 12345566777 43 57999999
Q ss_pred EEeecC---CceEEEEEEeCC----CCCCeEcceee
Q 012389 94 IGSKIG---KTGISLVYQTTD----FKTYELLDEYL 122 (464)
Q Consensus 94 ~ga~~~---~~g~~~ly~S~D----l~~W~~~g~l~ 122 (464)
+.+... ...++.+.+|++ +-.|+..+.+.
T Consensus 71 ys~~~~~~~~~~~~~v~~a~~~~~~~Gpw~~~~~~~ 106 (288)
T cd08980 71 FAAGDGGGNANHRMYVLENAGADPPTGPWTFKGRLA 106 (288)
T ss_pred EEccCCCCCcceeEEEEEeCCCCCCCCCceEeeEec
Confidence 987632 223455666653 56799877664
No 66
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=94.85 E-value=0.07 Score=53.16 Aligned_cols=54 Identities=11% Similarity=0.211 Sum_probs=40.6
Q ss_pred CeecCcceeecCCCcEEEEEEeecCCceEEEEEEeCCCCCCeEcceeeecCCCCCceEeceEEEec
Q 012389 75 DFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 140 (464)
Q Consensus 75 ~~RDP~V~w~~~~g~~~mv~ga~~~~~g~~~ly~S~Dl~~W~~~g~l~~~~~~~g~wECPdlf~l~ 140 (464)
.+-||.| .+ .+|.|||+..... + +|+|+||.+|+..+..+. ..++| .|+++..+
T Consensus 2 ~~~DP~i-~~-~~g~YY~~~T~~~---~---i~~S~DL~~W~~~g~~~~---~~~~W-AP~i~~~~ 55 (295)
T cd08982 2 EAADPVV-IL-FKGEYYLFASMSG---G---YWHSSDLIDWDFIPTNSL---PDEGY-APAVFVYD 55 (295)
T ss_pred CCCCCeE-EE-ECCEEEEEEeCCC---C---eEECCCcCCceECCcccC---CCCcC-cCEEEEEC
Confidence 4679999 54 4789998855421 2 799999999999987543 23478 89999886
No 67
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=94.76 E-value=0.27 Score=47.76 Aligned_cols=91 Identities=18% Similarity=0.258 Sum_probs=58.2
Q ss_pred CcEEEEEcccCCCCeeeEEEEEe--CCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeecCCCcEEEEEEeec--
Q 012389 23 GQIVMLYTGSTDKSVQVQNLAYP--ADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-- 98 (464)
Q Consensus 23 g~~~~~YTg~~~~~~~~q~lA~S--~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv~ga~~-- 98 (464)
|+++++|.+....+...+++.+| +|+| .+|... ..|...+ . ....++||.++. ..+|+.++++....
T Consensus 1 G~l~a~~~~~~~~~~~d~~i~~S~s~D~G----~tWs~~--~~v~~~~-~-~~~~~~~p~~~~-~~~g~l~l~~~~~~~~ 71 (275)
T PF13088_consen 1 GRLLAVWEGGSDEGAIDIVIRRSRSTDGG----KTWSEP--RIVADGP-K-PGRRYGNPSLVV-DPDGRLWLFYSAGSSG 71 (275)
T ss_dssp SEEEEEEEESSCSCCEEEEEEEECCCCCT----TEEEEE--EEEETST-B-TTCEEEEEEEEE-ETTSEEEEEEEEEETT
T ss_pred CeEEEEEECCcccCCCCEEEEEEEeeCCC----CeeCCC--EEEeecc-c-cCCcccCcEEEE-eCCCCEEEEEEEccCC
Confidence 56777777765555566778888 9987 999974 2344333 1 135789999844 35888887774432
Q ss_pred --CCceEEEEEEeCC-CCCCeEcceee
Q 012389 99 --GKTGISLVYQTTD-FKTYELLDEYL 122 (464)
Q Consensus 99 --~~~g~~~ly~S~D-l~~W~~~g~l~ 122 (464)
.....+..++|.| .++|+....+.
T Consensus 72 ~~~~~~~~~~~~S~D~G~TWs~~~~l~ 98 (275)
T PF13088_consen 72 GGWSGSRIYYSRSTDGGKTWSEPTDLP 98 (275)
T ss_dssp ESCCTCEEEEEEESSTTSS-EEEEEEH
T ss_pred CCCCceeEEEEEECCCCCCCCCccccc
Confidence 1222333477766 89999876654
No 68
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=93.90 E-value=0.14 Score=50.35 Aligned_cols=89 Identities=13% Similarity=0.157 Sum_probs=57.4
Q ss_pred ceEEEcCCCceeeCCCCCCCCCeecCcceeecCCCcEEEEEEeecCCceEEEEEEeCCCCCCeEcceeee----cC-CCC
Q 012389 54 LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLH----AV-PGT 128 (464)
Q Consensus 54 ~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv~ga~~~~~g~~~ly~S~Dl~~W~~~g~l~~----~~-~~~ 128 (464)
..|+-. .|++.|..++ ...+-||.| .. .+|+||+.-..... .+-..+|.| |++|+.++.... .. ...
T Consensus 5 ~~w~st--g~l~~pk~~~-~~~lkDPti-v~-~nGkYyvYgT~~~~-~~~~s~~~S--f~~Ws~~g~A~q~~l~~~~~~~ 76 (303)
T cd08987 5 FRWTST--GPLISPKSDW-IVAIKDPTV-VY-YNGRYHVYATTADA-GNYGSMYFN--FTDWSQAASATQYYLQNGNMTG 76 (303)
T ss_pred ceeccC--CccccCCCCC-eeeecCCeE-EE-ECCEEEEEEccCCC-CCceeeeec--ccCHhHhccchhhcccCCCCCc
Confidence 467764 6888765443 357899999 54 57888887433222 222336888 999998876432 11 123
Q ss_pred CceEeceEEEecccCccceeecCCCCCeEEEEEEee
Q 012389 129 GMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASL 164 (464)
Q Consensus 129 g~wECPdlf~l~~~~~~~l~~~~~g~~~~~vl~~s~ 164 (464)
+.| .|.+|...- +.+|+|..+.
T Consensus 77 ~fw-APqVfyf~p-------------k~kwYL~Yq~ 98 (303)
T cd08987 77 YRV-APQVFYFAP-------------QNKWYLIYQW 98 (303)
T ss_pred ccc-cCEEeeecc-------------CCEEEEEEec
Confidence 477 899998863 3488887764
No 69
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=93.90 E-value=1.4 Score=43.94 Aligned_cols=68 Identities=19% Similarity=0.231 Sum_probs=41.8
Q ss_pred CCCEEEeEEEEcCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeecCCC
Q 012389 9 INGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDG 88 (464)
Q Consensus 9 ~~Gv~SGsa~~~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~~g 88 (464)
..++|.+++.. .+|+++++|+.. .+.+|+|+|-- .=-|+.. + .. .....-||.|++ +++|
T Consensus 43 ~~~~WAP~i~~-~~g~~Y~~~~~~------~~~v~~s~~p~---gp~w~~~----~--~~---~~~~~IDp~vf~-DdDG 102 (295)
T cd08982 43 PDEGYAPAVFV-YDGTLYYTASTY------NSRIYKTADPL---SGPWEEV----D--KS---FPPGLADPALFI-DDDG 102 (295)
T ss_pred CCCcCcCEEEE-ECCEEEEEEeCC------CceEEEeCCCC---CCCcccc----c--cc---cCCCccCCceEE-CCCC
Confidence 46789999875 688866655542 23578886631 0124432 1 11 123468999944 4679
Q ss_pred cEEEEEEe
Q 012389 89 KWRLTIGS 96 (464)
Q Consensus 89 ~~~mv~ga 96 (464)
++||+.|.
T Consensus 103 k~Yl~~g~ 110 (295)
T cd08982 103 RLYLYYGC 110 (295)
T ss_pred CEEEEEec
Confidence 99999875
No 70
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=93.65 E-value=0.24 Score=48.14 Aligned_cols=119 Identities=15% Similarity=0.071 Sum_probs=65.3
Q ss_pred CCEEEeEEEEcCCCcEEEEEcccCCCC---eeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeecC
Q 012389 10 NGVWTGSATILPDGQIVMLYTGSTDKS---VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGP 86 (464)
Q Consensus 10 ~Gv~SGsa~~~~~g~~~~~YTg~~~~~---~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~ 86 (464)
..+..++++.+.+|+++|||+...... .......+|.|+| .||+... .|...+........+.+-+ -. .
T Consensus 46 ~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~~~~~~~~~S~D~G----~TWs~~~--~l~~~~~~~~~~~~~~~~i-~~-~ 117 (275)
T PF13088_consen 46 RRYGNPSLVVDPDGRLWLFYSAGSSGGGWSGSRIYYSRSTDGG----KTWSEPT--DLPPGWFGNFSGPGRGPPI-QL-P 117 (275)
T ss_dssp CEEEEEEEEEETTSEEEEEEEEEETTESCCTCEEEEEEESSTT----SS-EEEE--EEHHHCCCSCEECSEEEEE-EE-C
T ss_pred CcccCcEEEEeCCCCEEEEEEEccCCCCCCceeEEEEEECCCC----CCCCCcc--ccccccccceeccceeeee-Ee-c
Confidence 456777777667999999995443221 1222238999987 9999853 3322211111122344433 22 5
Q ss_pred CCcEEEEEEeecCCceEEEEEEeCC-CCCCeEcceeeecCCCCCceEeceEEEec
Q 012389 87 DGKWRLTIGSKIGKTGISLVYQTTD-FKTYELLDEYLHAVPGTGMWECVDFYPVA 140 (464)
Q Consensus 87 ~g~~~mv~ga~~~~~g~~~ly~S~D-l~~W~~~g~l~~~~~~~g~wECPdlf~l~ 140 (464)
+|.+++..-........+.++.|+| .+.|+....+. .....-.|.+++++
T Consensus 118 ~G~l~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~~~~----~~~~~~e~~~~~~~ 168 (275)
T PF13088_consen 118 DGRLIAPYYHESGGSFSAFVYYSDDGGKTWSSGSPIP----DGQGECEPSIVELP 168 (275)
T ss_dssp TTEEEEEEEEESSCEEEEEEEEESSTTSSEEEEEECE----CSEEEEEEEEEEET
T ss_pred CCCEEEEEeeccccCcceEEEEeCCCCceeecccccc----ccCCcceeEEEECC
Confidence 7877776322222334555666655 79999876553 11112246777776
No 71
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=93.14 E-value=0.65 Score=47.26 Aligned_cols=95 Identities=17% Similarity=0.239 Sum_probs=60.9
Q ss_pred EeEEEEcC-CCcEEEEEcccCCCC---------------------------eeeEEEEEeCCCCCCCcceEEEcCCCcee
Q 012389 14 TGSATILP-DGQIVMLYTGSTDKS---------------------------VQVQNLAYPADPSDPLLLDWVKYPGNPVL 65 (464)
Q Consensus 14 SGsa~~~~-~g~~~~~YTg~~~~~---------------------------~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi 65 (464)
...++.++ +|+.+|++.++.... ...+++|++++. .|.+|+-+ .|++
T Consensus 154 DP~vf~d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~---dl~~W~~~--~PL~ 228 (349)
T cd08997 154 DPFVFEDPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKND---DLTEWKLL--PPLL 228 (349)
T ss_pred CCEEEecCCCCcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCC---CCCCcEEc--Cccc
Confidence 34555543 588999999986421 245678877643 23789986 5887
Q ss_pred eCCCCCCCCCeecCcceeecCCCcEEEEEEeec-------CCceEEEEEEeCCCC-CCeE
Q 012389 66 VPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-------GKTGISLVYQTTDFK-TYEL 117 (464)
Q Consensus 66 ~~p~~~~~~~~RDP~V~w~~~~g~~~mv~ga~~-------~~~g~~~ly~S~Dl~-~W~~ 117 (464)
.+. .. ....-.|.| ++ .+|+|||+..++. .....+..|.|++|. -|+.
T Consensus 229 ~a~-~v-~d~~E~P~v-~~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~vsdsl~GP~~~ 284 (349)
T cd08997 229 EAN-GV-NDELERPHV-VF-HNGKYYLFTISHRSTFAPGLSGPDGLYGFVSDSLRGPYKP 284 (349)
T ss_pred cCC-Cc-CCceEcceE-EE-ECCEEEEEEeCCcCccccccCCCCcEEEEEeCCCCCCCcc
Confidence 653 21 235789999 65 6899999977542 112246677888874 3443
No 72
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=92.47 E-value=0.69 Score=45.28 Aligned_cols=94 Identities=15% Similarity=0.126 Sum_probs=56.9
Q ss_pred eEEEEcCCCcEEEEEcccCCC--------CeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCC------------CCC
Q 012389 15 GSATILPDGQIVMLYTGSTDK--------SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHI------------GPK 74 (464)
Q Consensus 15 Gsa~~~~~g~~~~~YTg~~~~--------~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~------------~~~ 74 (464)
.+++.+.+|.++|+.|+.... ......++.|+|. ++|+.. +.|+..++.. ...
T Consensus 5 P~v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DL-----v~W~~~--g~v~~~~~~~~~~~~~~~~~~~~~~ 77 (269)
T cd08986 5 TYVTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDL-----KKWESL--GLIWDREKDATWQSYWIDEDDWYKN 77 (269)
T ss_pred CeEEecCCCcEEEEEccCCccccccccccCCCceEEEeCccc-----cCcccc--CcccccCCcccccccccccCCcccC
Confidence 456655567899999976421 1244668899986 999875 4566533211 123
Q ss_pred CeecCcceeecCCCcEEEEEEeecC--CceEEEEEEeCCCC-CCeE
Q 012389 75 DFRDPTTAWAGPDGKWRLTIGSKIG--KTGISLVYQTTDFK-TYEL 117 (464)
Q Consensus 75 ~~RDP~V~w~~~~g~~~mv~ga~~~--~~g~~~ly~S~Dl~-~W~~ 117 (464)
.+-=|.| .+ .+|+|||++.+... ....+.+.+|++.. .|+.
T Consensus 78 ~~WAP~v-~~-~~g~yyl~~s~~~~~~~~~~i~va~a~~p~Gp~~~ 121 (269)
T cd08986 78 AVWAPEL-HY-IKGRWYLVACMNNPGYGGSSILLSTSGKIEGPYKH 121 (269)
T ss_pred CcCCceE-EE-ECCEEEEEEEccCCCCCceEEEEEeCCCCCCCcEe
Confidence 4456777 33 46999999876531 22345566666643 3444
No 73
>PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A.
Probab=92.08 E-value=0.77 Score=46.03 Aligned_cols=86 Identities=24% Similarity=0.370 Sum_probs=49.0
Q ss_pred eEEEEcCCCcEEEEEcccCCCCe-eeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeecCCCcEEEE
Q 012389 15 GSATILPDGQIVMLYTGSTDKSV-QVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLT 93 (464)
Q Consensus 15 Gsa~~~~~g~~~~~YTg~~~~~~-~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv 93 (464)
||.|+-+||.+++=-.+....+. ..-.|-||.|+| .+|+-..+- +| ...+||.|+.. ++|+-.|+
T Consensus 124 GSGV~m~dGTLVFPv~a~~~~~~~~~SlIiYS~d~g----~~W~lskg~----s~-----~gC~~psv~EW-e~gkLlM~ 189 (310)
T PF13859_consen 124 GSGVVMEDGTLVFPVQATKKNGDGTVSLIIYSTDDG----KTWKLSKGM----SP-----AGCSDPSVVEW-EDGKLLMM 189 (310)
T ss_dssp EE-EE-TTS-EEEEEEEEETT---EEEEEEEESSTT----SS-EE-S-------------TT-EEEEEEEE--TTEEEEE
T ss_pred CCceEEcCCCEEEEEeeeccCccceEEEEEEECCCc----cceEecccc----CC-----CCcceEEEEec-cCCeeEEE
Confidence 34455578988877777766555 377888999976 899875321 12 35799998622 46777777
Q ss_pred EEeecCCceEEEEEEeCC-CCCCeE
Q 012389 94 IGSKIGKTGISLVYQTTD-FKTYEL 117 (464)
Q Consensus 94 ~ga~~~~~g~~~ly~S~D-l~~W~~ 117 (464)
.. +.+ |+--+|+|.| ...|+.
T Consensus 190 ~~-c~~--g~rrVYeS~DmG~tWte 211 (310)
T PF13859_consen 190 TA-CDD--GRRRVYESGDMGTTWTE 211 (310)
T ss_dssp EE--TT--S---EEEESSTTSS-EE
T ss_pred Ee-ccc--ceEEEEEEcccceehhh
Confidence 43 332 4445899988 578986
No 74
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=91.69 E-value=4.4 Score=40.07 Aligned_cols=136 Identities=14% Similarity=0.199 Sum_probs=79.2
Q ss_pred CEEEeEEEE-cCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeecCCCc
Q 012389 11 GVWTGSATI-LPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGK 89 (464)
Q Consensus 11 Gv~SGsa~~-~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~~g~ 89 (464)
+.|...++. ..+++.+|+|+. . ..++|+|.|-.++ -.|... .|++.........+.=|+.| .. ++++
T Consensus 77 ~fwAPqVfyf~pk~kwYL~Yq~-~-----~~~yaTs~dp~~P--~~ws~~--qpl~~~~~~~~~~~~ID~~v-I~-Dd~~ 144 (303)
T cd08987 77 YRVAPQVFYFAPQNKWYLIYQW-W-----PAAYSTNSDISNP--NGWSAP--QPLFSGTPNGSPGGWIDFWV-IC-DDTN 144 (303)
T ss_pred ccccCEEeeeccCCEEEEEEec-C-----ceEEEeCCCCCCC--CccCCC--cccccCcccCCCCCccceeE-Ee-CCCC
Confidence 345555541 357899999995 1 2468999886555 357664 57765321112345689999 54 6788
Q ss_pred EEEEEEeecCCceEEEEEEeC-CCCCC-----eEcceeeecCCCCCceEeceEEEecccCccceeecCCCCCeEEEEEEe
Q 012389 90 WRLTIGSKIGKTGISLVYQTT-DFKTY-----ELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKAS 163 (464)
Q Consensus 90 ~~mv~ga~~~~~g~~~ly~S~-Dl~~W-----~~~g~l~~~~~~~g~wECPdlf~l~~~~~~~l~~~~~g~~~~~vl~~s 163 (464)
.||+.... .| -||+|+ .+.+. +.. .........-.+|-|+.+++.+. .+++|.++
T Consensus 145 ~YLff~~d---nG--~iyra~~~~~nFp~~~~~~~-~~~~~~~~~~lfEa~~Vykv~G~-------------~~Ylmive 205 (303)
T cd08987 145 CYLFFSDD---NG--KLYRSSTTLGNFPNGGTETV-IIMSDSNKNNLFEASNVYKVKGQ-------------NQYLLIVE 205 (303)
T ss_pred EEEEEecC---CC--eEEEEecchhhCCCCCCccE-EEecCCCccccceeeEEEEECCC-------------eEEEEEEE
Confidence 88887532 24 478862 22222 111 11111111238999999999732 36667776
Q ss_pred eCCCCeeEEEEEEEe
Q 012389 164 LDDTKVDHYAIGTYN 178 (464)
Q Consensus 164 ~~~~~~~~y~iG~~d 178 (464)
..+..+..|+.+ |.
T Consensus 206 A~g~~~~rYfrs-~T 219 (303)
T cd08987 206 AIGSDGGRYFRS-WT 219 (303)
T ss_pred ecCCCCCCeEEE-EE
Confidence 655544467777 54
No 75
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=89.90 E-value=1.3 Score=44.55 Aligned_cols=93 Identities=18% Similarity=0.299 Sum_probs=57.3
Q ss_pred cCCCcEEEEEcccCCCC-------eeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCee---cCc--ceeecCC
Q 012389 20 LPDGQIVMLYTGSTDKS-------VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFR---DPT--TAWAGPD 87 (464)
Q Consensus 20 ~~~g~~~~~YTg~~~~~-------~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~R---DP~--V~w~~~~ 87 (464)
..++++||.|..+..-+ .....||+|+|.| .+|++.+ ..+-...+.. ..+. .++ ..+. ..
T Consensus 102 ~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G----~tW~~~~-~~~~~~~~~~--~g~~~~~~~fq~~a~~-~~ 173 (316)
T PF13810_consen 102 SVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNG----ETWTVVP-GTIRPNSPFH--PGFNQGNWNFQMAAFV-KD 173 (316)
T ss_pred EECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCC----CCceeCC-Cccccccccc--CCcccccccccccccc-CC
Confidence 46899999999886432 2357899999986 9999974 2232221111 1111 122 2122 35
Q ss_pred CcEEEEEEeecCCceEEEEEEe-----CCCCCCeEcce
Q 012389 88 GKWRLTIGSKIGKTGISLVYQT-----TDFKTYELLDE 120 (464)
Q Consensus 88 g~~~mv~ga~~~~~g~~~ly~S-----~Dl~~W~~~g~ 120 (464)
+.|+-++|......+.+.|++. .|+..|+|-..
T Consensus 174 dgyVYv~gt~~~R~g~~~LaRV~~~~i~d~~ayeyw~g 211 (316)
T PF13810_consen 174 DGYVYVYGTPFGRNGGVYLARVPPDDILDRSAYEYWDG 211 (316)
T ss_pred CCEEEEEeCCCCCCCcEEEEEeCHHHCCChhhccccCC
Confidence 5688888876555677888985 46667777543
No 76
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=89.15 E-value=2.6 Score=42.54 Aligned_cols=89 Identities=18% Similarity=0.209 Sum_probs=55.2
Q ss_pred EEEcCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeecCCCcEEEEEEe
Q 012389 17 ATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 96 (464)
Q Consensus 17 a~~~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv~ga 96 (464)
.+...+|++++.+.+....+.....+.+|+|+| .+|+... ++ .+ .....-|.|+ .-++|..+|+...
T Consensus 151 gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~--~~----~~~~~e~~i~-el~dG~l~~~~R~ 217 (351)
T cd00260 151 GIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GV--ND----AGGCSECSVV-ELSDGKLYMYTRD 217 (351)
T ss_pred eEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CC--CC----CCCCcCCEEE-EecCCEEEEEEee
Confidence 344457888766554433334556788999987 8997632 11 11 1234568873 3257888887655
Q ss_pred ecCCceEEEEEEeCC-CCCCeEcce
Q 012389 97 KIGKTGISLVYQTTD-FKTYELLDE 120 (464)
Q Consensus 97 ~~~~~g~~~ly~S~D-l~~W~~~g~ 120 (464)
.. .+...+|.|.| ..+|+....
T Consensus 218 ~~--~~~~~~~~S~D~G~tWs~~~~ 240 (351)
T cd00260 218 NS--GGRRPVYESRDMGTTWTEALG 240 (351)
T ss_pred CC--CCcEEEEEEcCCCcCcccCcC
Confidence 42 35677888877 589987543
No 77
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=88.79 E-value=1.3 Score=43.57 Aligned_cols=73 Identities=18% Similarity=0.317 Sum_probs=49.0
Q ss_pred CCCEEEeEEEEcCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeecCCC
Q 012389 9 INGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDG 88 (464)
Q Consensus 9 ~~Gv~SGsa~~~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~~g 88 (464)
..++|...+.. .+|+++|+|+...........+|++++-. -.|++ |+... ....-||.|++ +++|
T Consensus 62 ~~~~WAP~i~~-~~gkyy~yys~~~~~~~~~~~va~ad~p~----Gpw~~----~~~~~-----~~~~IDp~vf~-DddG 126 (280)
T cd09002 62 EGDVWAPDLCK-YDGRYYIYFPAIPEGGNWTNMVIWADSPE----GPWSK----PIDLK-----IGGCIDPGHVV-DEDG 126 (280)
T ss_pred CCCEEcCeeEE-ECCEEEEEEEeecCCCCceEEEEEECCCC----CCCcC----CEecC-----CCCccCCceEE-cCCC
Confidence 45788888864 89999999998764444567888886531 23643 32111 12236999955 4789
Q ss_pred cEEEEEEe
Q 012389 89 KWRLTIGS 96 (464)
Q Consensus 89 ~~~mv~ga 96 (464)
++||+.+.
T Consensus 127 ~~Yl~~~~ 134 (280)
T cd09002 127 NRYLFLSG 134 (280)
T ss_pred CEEEEECC
Confidence 99999864
No 78
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=85.09 E-value=6.6 Score=41.97 Aligned_cols=123 Identities=22% Similarity=0.321 Sum_probs=69.3
Q ss_pred CCCCEEEeEEEEcCCCcEEEEEcccCCCC------eeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcc
Q 012389 8 DINGVWTGSATILPDGQIVMLYTGSTDKS------VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTT 81 (464)
Q Consensus 8 D~~Gv~SGsa~~~~~g~~~~~YTg~~~~~------~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V 81 (464)
+.+|||..++. -.||+.+|+||...... ....+-|-|-+| .|+- |+.-+ ....-||.+
T Consensus 87 ~S~giWAPdl~-y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~G------~WsD----pi~l~-----~~~~iDPsl 150 (549)
T COG3507 87 YSGGIWAPDLS-YHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESIDG------PWSD----PIKLN-----GSNAIDPSL 150 (549)
T ss_pred CCCceecccee-cCCCcEEEEEecccccCCcccccccEEEEecCCCC------Cccc----ceecC-----CcCccCCce
Confidence 57789999987 58999999998775432 123333333332 3542 44332 123579999
Q ss_pred eeecCCCcEEEEEEeecCC---ce-EEEEEEeCCCCCCeEcce----eeecCCCCCceEeceEEEecccCccceeec
Q 012389 82 AWAGPDGKWRLTIGSKIGK---TG-ISLVYQTTDFKTYELLDE----YLHAVPGTGMWECVDFYPVAINGSVGLDTS 150 (464)
Q Consensus 82 ~w~~~~g~~~mv~ga~~~~---~g-~~~ly~S~Dl~~W~~~g~----l~~~~~~~g~wECPdlf~l~~~~~~~l~~~ 150 (464)
+++++|+-+|+.++-..+ .+ ..++++-.|-..=...++ ++.. ...+.-|-|-+++-+ +..+|+.+
T Consensus 151 -f~D~dGr~wlv~~~w~~~~~~~~~~~i~l~~~~~~~~~l~g~~~~~~~~G-~~~~~~EGPhl~k~~--gYYYL~~a 223 (549)
T COG3507 151 -FFDKDGRKWLVNGSWDGGIFMHSFAGIILQEYDKTTQKLVGQGYKIIFDG-GNGGLTEGPHLYKKT--GYYYLYVA 223 (549)
T ss_pred -eecCCCCEEEEecccCCCcccccccceeeeeccccccccCCccceeEecc-CCCccccCceeeccC--CEEEEEEE
Confidence 446889999999875211 01 123344333333233333 2221 222378999888775 44444444
No 79
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=84.10 E-value=17 Score=36.57 Aligned_cols=118 Identities=15% Similarity=0.210 Sum_probs=66.5
Q ss_pred CCEEEeEEEEcCCCcEEEEEcccCCC----------CeeeEEEEEeCCCCCCCcceEEEcCCCceeeCC--CCCCCCCee
Q 012389 10 NGVWTGSATILPDGQIVMLYTGSTDK----------SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP--RHIGPKDFR 77 (464)
Q Consensus 10 ~Gv~SGsa~~~~~g~~~~~YTg~~~~----------~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p--~~~~~~~~R 77 (464)
..+.+++.+.+.+|+++|||..+... ....+.+.+|.|+| .+|.+. ..+.... ..+ ..-++
T Consensus 74 ~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G----~tW~~p--~~l~~~~~~~~~-~~~~~ 146 (351)
T cd00260 74 SRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDDG----ITWSSP--RDLTPSVKGDNW-AALFT 146 (351)
T ss_pred CcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcCC----ceecCC--ccCCccccCcce-eEEEe
Confidence 45788888875449999999876431 23567889999987 899863 2222211 111 11233
Q ss_pred cC--cceeecCCCcEEEEEEeecC--CceEEEEEEeCCCCCCeEcceeeecCCCCCceEeceEEEec
Q 012389 78 DP--TTAWAGPDGKWRLTIGSKIG--KTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 140 (464)
Q Consensus 78 DP--~V~w~~~~g~~~mv~ga~~~--~~g~~~ly~S~Dl~~W~~~g~l~~~~~~~g~wECPdlf~l~ 140 (464)
-| .+ -. ++|+++|.+-.... ..-..++|..++.+.|+..... .. ..++.| |.++++.
T Consensus 147 ~~g~gi-~l-~~Grlv~p~~~~~~~~~~~~~~~~S~D~G~tW~~~~~~-~~--~~~~~e-~~i~el~ 207 (351)
T cd00260 147 GPGSGI-QM-KDGRLVFPVYGGNAGGRVSSAIIYSDDSGKTWKLGEGV-ND--AGGCSE-CSVVELS 207 (351)
T ss_pred cCcCeE-Ee-cCCcEEEEEEEEcCCCCEEEEEEEECCCCCCcEECCCC-CC--CCCCcC-CEEEEec
Confidence 33 23 22 46887776544322 1224445544557999864322 11 123455 6788886
No 80
>PTZ00334 trans-sialidase; Provisional
Probab=77.71 E-value=14 Score=41.55 Aligned_cols=83 Identities=19% Similarity=0.335 Sum_probs=51.8
Q ss_pred EEEcCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcce-eecCCCcEEEEEE
Q 012389 17 ATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA-WAGPDGKWRLTIG 95 (464)
Q Consensus 17 a~~~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~-w~~~~g~~~mv~g 95 (464)
.|+-+||.+++=-.+....+...-.|-||+|.+ +|+-..+- + ..+.+||.|+ | ++|+-.|+..
T Consensus 265 GI~medGTLVFPv~a~~~~g~~vslIiYS~d~g-----~W~ls~g~----s-----~~gC~~P~I~EW--e~gkLlM~t~ 328 (780)
T PTZ00334 265 GVQMKDGTLVFPVEGTKKDGKAVSLIIYSSATE-----SGNLSKGM----S-----ADGCSDPSVVEW--KEGKLMMMTA 328 (780)
T ss_pred eEEecCCeEEEEEEEEcCCCCEEEEEEEecCCC-----CeEEcCCC----C-----CCCCCCCEEEEE--cCCeEEEEEE
Confidence 333468887765556554454556788998863 48543211 1 2357999986 5 3577777654
Q ss_pred eecCCceEEEEEEeCC-CCCCeEc
Q 012389 96 SKIGKTGISLVYQTTD-FKTYELL 118 (464)
Q Consensus 96 a~~~~~g~~~ly~S~D-l~~W~~~ 118 (464)
. .+ |+--+|+|.| ...|+..
T Consensus 329 C-~d--G~RrVYES~DmG~tWtEA 349 (780)
T PTZ00334 329 C-DD--GRRRVYESGDKGDSWTEA 349 (780)
T ss_pred e-CC--CCEEEEEECCCCCChhhC
Confidence 3 32 3445899999 5789754
No 81
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=75.32 E-value=2.5 Score=45.08 Aligned_cols=76 Identities=21% Similarity=0.263 Sum_probs=47.9
Q ss_pred CCceeeCCCCCCCCCeecCcceeecCCCcEEEEEEeecCCceEEEEEEeCCCCCCeEcceeeec--------C-CCC-Cc
Q 012389 61 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHA--------V-PGT-GM 130 (464)
Q Consensus 61 ~~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv~ga~~~~~g~~~ly~S~Dl~~W~~~g~l~~~--------~-~~~-g~ 130 (464)
.|||+.. ..=||.+ .+ .+.-|||....-.--.| +.+++|.||+||+..+..+.. . +.. ++
T Consensus 22 ~NPvl~g-------f~PDpSi-~r-vg~dyYia~stF~~fpG-l~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~gi 91 (549)
T COG3507 22 LNPVLAG-------FNPDPSI-VR-VGDDYYIATSTFEWFPG-LAIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGI 91 (549)
T ss_pred cCccccc-------cCCCCce-Ee-cCCceEEEcceEEEcCc-eeeeccccccCcEEecccccCcchhhhhcccCCCCce
Confidence 3788752 2268998 54 56679988774333334 889999999999998874321 1 112 36
Q ss_pred eEeceEEEecccCccceee
Q 012389 131 WECVDFYPVAINGSVGLDT 149 (464)
Q Consensus 131 wECPdlf~l~~~~~~~l~~ 149 (464)
| .|++. .. +|+-.|++
T Consensus 92 W-APdl~-y~-dGkfwl~y 107 (549)
T COG3507 92 W-APDLS-YH-DGKFWLYY 107 (549)
T ss_pred e-cccee-cC-CCcEEEEE
Confidence 7 78887 32 24444444
No 82
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=69.44 E-value=1e+02 Score=33.01 Aligned_cols=94 Identities=14% Similarity=0.123 Sum_probs=55.4
Q ss_pred CCCcEEEEEcccCC---CCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeecCCCcEEEEEEee
Q 012389 21 PDGQIVMLYTGSTD---KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 97 (464)
Q Consensus 21 ~~g~~~~~YTg~~~---~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv~ga~ 97 (464)
.+|++++||-=+-. .+...=+.|+|+|. +||+..+ ++|.|...++..+..-=.++-. .++.+.|.-|..
T Consensus 50 ~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dl-----v~W~~~p--iaL~Pd~~~d~~g~ySGSAV~~-~~~l~lfytg~v 121 (486)
T COG1621 50 FDGKYHLFYQYNPFGAAHGPKHWGHAVSKDL-----VHWEHLP--IALAPDDDYDSHGCYSGSAVVD-DGNLSLFYTGNV 121 (486)
T ss_pred ECCEEEEEEecCCCCCCCCCceeeeeccCCc-----ccceECC--ceecCCCccccCCceeeeEEEe-CCcEEEEEccce
Confidence 47899999986541 12344578999885 9999852 4555543333333333333232 466777776654
Q ss_pred c----CCceEEEEEEeCCCCCCeE-cceee
Q 012389 98 I----GKTGISLVYQTTDFKTYEL-LDEYL 122 (464)
Q Consensus 98 ~----~~~g~~~ly~S~Dl~~W~~-~g~l~ 122 (464)
. .....=.+..|+|..+++. .+...
T Consensus 122 ~~~~~~r~~~Q~iA~s~dg~~f~K~~~~~i 151 (486)
T COG1621 122 RDSNGIRQQTQCIAYSEDGGTFEKYSGNPI 151 (486)
T ss_pred eccCCcceeEEEEEEEcCCCceEeccCCce
Confidence 2 1222445777888888776 34443
No 83
>PF02012 BNR: BNR/Asp-box repeat; InterPro: IPR002860 Members of this entry contain multiple BNR (bacterial neuraminidase repeat) repeats or Asp-boxes. The repeats are short, however the repeats are never found closer than 40 residues together suggesting that the repeat is structurally longer. These repeats are found in a variety of non-homologous proteins, including bacterial ribonucleases, sulphite oxidases, reelin, netrins, sialidases, neuraminidases, some lipoprotein receptors, and a variety of glycosyl hydrolases [].; PDB: 2JKB_A 2VW0_A 2VW2_A 2VW1_A 2CN2_D 2CN3_B 2VK7_B 2VK5_A 2VK6_A 2BF6_A ....
Probab=61.10 E-value=6.6 Score=19.58 Aligned_cols=11 Identities=36% Similarity=0.785 Sum_probs=7.8
Q ss_pred EeCCCCCCCcceEEE
Q 012389 44 YPADPSDPLLLDWVK 58 (464)
Q Consensus 44 ~S~D~gd~~l~~w~k 58 (464)
+|.|+| .+|++
T Consensus 2 ~S~D~G----~TW~~ 12 (12)
T PF02012_consen 2 YSTDGG----KTWKK 12 (12)
T ss_dssp EESSTT----SS-EE
T ss_pred EeCCCc----ccCcC
Confidence 588887 89975
No 84
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=58.78 E-value=33 Score=36.49 Aligned_cols=91 Identities=14% Similarity=0.194 Sum_probs=54.0
Q ss_pred CCCcEEEEEcccCCC---CeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCC-CCCeecCcceeecCCCcEEEEEEe
Q 012389 21 PDGQIVMLYTGSTDK---SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIG-PKDFRDPTTAWAGPDGKWRLTIGS 96 (464)
Q Consensus 21 ~~g~~~~~YTg~~~~---~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~-~~~~RDP~V~w~~~~g~~~mv~ga 96 (464)
.+|.++|||.-+-.. +...=+.|+|+|. +||+.++ |.|.|....+ ...|---.+ .. .+|.=.|++.+
T Consensus 68 ykG~yHLFyQyNP~gavwg~ivWGHavSkDL-----inW~~lp--~Ai~Ps~~~ding~wSGSat-i~-~~~~~vilytg 138 (571)
T KOG0228|consen 68 YKGKYHLFYQYNPKGAVWGNIVWGHAVSKDL-----INWEALP--PAIAPSEWFDINGCWSGSAT-ID-PNNSPVILYTG 138 (571)
T ss_pred cCcEEEEEEecCCCCceeeeeEeeeecchhh-----ccccccC--cccCCCCccccCccccceEE-Ec-cCCCeEEEecc
Confidence 589999999876543 3455578999996 9999974 6665532111 122333333 32 56666676655
Q ss_pred ecCCceEEEEEEe-CC-----CCCCeEcce
Q 012389 97 KIGKTGISLVYQT-TD-----FKTYELLDE 120 (464)
Q Consensus 97 ~~~~~g~~~ly~S-~D-----l~~W~~~g~ 120 (464)
......++.+|.- .| |+.|...+.
T Consensus 139 ~d~~~rqVqn~a~p~d~sdp~l~~w~k~~g 168 (571)
T KOG0228|consen 139 IDPNNRQVQNYAYPKDVSDPQLIAWSKDGG 168 (571)
T ss_pred cCcCceEEEEEeccCCCCchhhheeecCCC
Confidence 4333456777762 22 556766543
No 85
>PF00337 Gal-bind_lectin: Galactoside-binding lectin; InterPro: IPR001079 Galectins (also known as galaptins or S-lectin) are a family of proteins defined by having at least one characteristic carbohydrate recognition domain (CRD) with an affinity for beta-galactosides and sharing certain sequence elements. Members of the galectins family are found in mammals, birds, amphibians, fish, nematodes, sponges, and some fungi. Galectins are known to carry out intra- and extracellular functions through glycoconjugate-mediated recogntion. From the cytosol they may be secreted by non-classical pathways, but they may also be targeted to the nucleus or specific sub-cytosolic sites. Within the same peptide chain some galectins have a CRD with only a few additional amino acids, whereas others have two CRDs joined by a link peptide, and one (galectin-3) has one CRD joined to a different type of domain [, ]. The galectin carbohydrate recognition domain (CRD) is a beta-sandwich of about 135 amino acid. The two sheets are slightly bent with 6 strands forming the concave side and 5 strands forming the convex side. The concave side forms a groove in which carbohydrate is bound, and which is long enough to hold about a linear tetrasaccharide [, ].; GO: 0005529 sugar binding; PDB: 2WSU_B 2WT0_A 2WT1_A 2WT2_B 2WSV_A 1HLC_A 2ZGQ_A 3M3Q_B 1WW5_C 3M3E_A ....
Probab=46.50 E-value=39 Score=28.89 Aligned_cols=30 Identities=20% Similarity=0.417 Sum_probs=24.4
Q ss_pred EecccCCeEEEEEEEecceEEEEEeCCeeEE
Q 012389 385 VPVLQGEKLSMRILVDHSIVESFGQGGRTVI 415 (464)
Q Consensus 385 ~p~~~~~~~~LrIfvD~S~vEvF~N~G~~~~ 415 (464)
.|+..++..+|+|.+..+..+|++| |....
T Consensus 77 ~pf~~g~~F~i~I~~~~~~f~I~vn-g~~~~ 106 (133)
T PF00337_consen 77 FPFQPGQPFEIRIRVEEDGFKIYVN-GKHFC 106 (133)
T ss_dssp TSSTTTSEEEEEEEEESSEEEEEET-TEEEE
T ss_pred eeecCCceEEEEEEEecCeeEEEEC-CeEEE
Confidence 3555688999999999999999999 45443
No 86
>PF06905 FAIM1: Fas apoptotic inhibitory molecule (FAIM1); InterPro: IPR010695 This family consists of several fas apoptotic inhibitory molecule (FAIM) proteins. FAIM expression is upregulated in B cells by anti-Ig treatment that induces Fas-resistance, and overexpression of FAIM diminishes sensitivity to Fas-mediated apoptosis of B and non-B cell lines. FAIM is highly evolutionarily conserved and is widely expressed in murine tissues, suggesting that FAIM plays an important role in cellular physiology [].; GO: 0043066 negative regulation of apoptosis; PDB: 3MX7_A 2KW1_A 2KD2_A.
Probab=39.06 E-value=41 Score=30.86 Aligned_cols=31 Identities=16% Similarity=0.335 Sum_probs=26.3
Q ss_pred EEEEEEEecceEEEEEeCCeeEEEEEeecCcc
Q 012389 393 LSMRILVDHSIVESFGQGGRTVITSRIYPTKA 424 (464)
Q Consensus 393 ~~LrIfvD~S~vEvF~N~G~~~~T~rvyp~~~ 424 (464)
...||++|...++|++| |+..=|.+-|.+.+
T Consensus 108 ~~~RIvLdk~t~~vwvn-G~~iet~~eFvd~G 138 (177)
T PF06905_consen 108 QEYRIVLDKDTMDVWVN-GEKIETEGEFVDDG 138 (177)
T ss_dssp EEEEEEEETTTTEEEET-TCEE--EEEEETTC
T ss_pred CEEEEEEEcceEEEEEC-CEEccccceecCCC
Confidence 68999999999999999 78888999998875
No 87
>PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function.; PDB: 3IMM_B 3NMB_A 3S5Q_A 3OSD_A 3HBK_A 3H3L_A 3U1X_A.
Probab=38.93 E-value=1.4e+02 Score=26.71 Aligned_cols=58 Identities=19% Similarity=0.190 Sum_probs=35.5
Q ss_pred cCCeEEEEEEEecceEEEEEeCCeeEEEEEeecCcccc-CccEEEEEEcCCCcEEEEEEEE
Q 012389 389 QGEKLSMRILVDHSIVESFGQGGRTVITSRIYPTKAIY-GAARLFLFNNATGVNVKATLKI 448 (464)
Q Consensus 389 ~~~~~~LrIfvD~S~vEvF~N~G~~~~T~rvyp~~~~~-~~~~i~~~~~~~~~~~~~~l~~ 448 (464)
.++=.+++|.+..+.|.||+| |+.+++..--...... .+..|.|...++...+. +|+|
T Consensus 126 ~~~W~~~~I~~~g~~i~v~vn-G~~v~~~~d~~~~~~~~~~G~Igl~~~~~~~~fr-Ni~I 184 (185)
T PF06439_consen 126 PGEWNTVRIVVKGNRITVWVN-GKPVADFTDPSFPYSNPTKGPIGLQTHGSEVQFR-NIKI 184 (185)
T ss_dssp TTSEEEEEEEEETTEEEEEET-TEEEEEEETTSHHHHHHSSBEEEEECSSSTEEEE-EEEE
T ss_pred CCceEEEEEEEECCEEEEEEC-CEEEEEEEcCCCCCCCCCceEEEEEeCCCeEEEE-EEEE
Confidence 467789999999999999999 6777665432111000 13456666655443332 5554
No 88
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=38.17 E-value=3.2e+02 Score=28.76 Aligned_cols=75 Identities=19% Similarity=0.276 Sum_probs=50.6
Q ss_pred EeEEEEc-CCCcEEEEEcccCCC--------------------------------CeeeEEEEEeCCCCCCCcceEEEcC
Q 012389 14 TGSATIL-PDGQIVMLYTGSTDK--------------------------------SVQVQNLAYPADPSDPLLLDWVKYP 60 (464)
Q Consensus 14 SGsa~~~-~~g~~~~~YTg~~~~--------------------------------~~~~q~lA~S~D~gd~~l~~w~k~~ 60 (464)
.+..+.+ .+|+.||+|.|+... ....++||...++ + +..|+-+
T Consensus 212 DP~~f~DP~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~-~--~~~w~~~- 287 (428)
T PF02435_consen 212 DPHVFEDPEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTND-D--GTVWELL- 287 (428)
T ss_dssp EEEEEEETTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTT-T--TSEEEEE-
T ss_pred CCeeEECCCCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCC-C--CCccEEe-
Confidence 4666665 589999999988621 0345788988775 2 2579887
Q ss_pred CCceeeCCCCCCCCCeecCcceeecCCCcEEEEEEee
Q 012389 61 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 97 (464)
Q Consensus 61 ~~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv~ga~ 97 (464)
.|+|.... + .....=|.|+. .+|+||++.-++
T Consensus 288 -~PL~~a~~-v-~de~ERP~iv~--~~gkyYLFt~s~ 319 (428)
T PF02435_consen 288 -PPLLSANG-V-NDELERPHIVF--MNGKYYLFTISH 319 (428)
T ss_dssp -EEEEEETT-T-BS-EEEEEEEE--ETTEEEEEEEEE
T ss_pred -Ccceeccc-c-cccccCCcEEE--ECCEEEEEEEec
Confidence 49998532 1 12345577744 489999998876
No 89
>cd00070 GLECT Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation.
Probab=36.50 E-value=64 Score=27.45 Aligned_cols=30 Identities=23% Similarity=0.497 Sum_probs=24.7
Q ss_pred EecccCCeEEEEEEEecceEEEEEeCCeeEE
Q 012389 385 VPVLQGEKLSMRILVDHSIVESFGQGGRTVI 415 (464)
Q Consensus 385 ~p~~~~~~~~LrIfvD~S~vEvF~N~G~~~~ 415 (464)
.|+..+...+|+|.++....+||+|+ +...
T Consensus 72 ~pf~~g~~F~l~i~~~~~~f~i~vng-~~~~ 101 (127)
T cd00070 72 FPFQPGQPFELTILVEEDKFQIFVNG-QHFF 101 (127)
T ss_pred CCCCCCCeEEEEEEEcCCEEEEEECC-EeEE
Confidence 45556889999999999999999995 5443
No 90
>smart00276 GLECT Galectin. Galectin - galactose-binding lectin
Probab=34.47 E-value=73 Score=27.19 Aligned_cols=31 Identities=23% Similarity=0.440 Sum_probs=25.0
Q ss_pred EecccCCeEEEEEEEecceEEEEEeCCeeEEE
Q 012389 385 VPVLQGEKLSMRILVDHSIVESFGQGGRTVIT 416 (464)
Q Consensus 385 ~p~~~~~~~~LrIfvD~S~vEvF~N~G~~~~T 416 (464)
.|+..+....|.|.+.....+||+|+ ....+
T Consensus 71 ~Pf~~g~~F~l~i~~~~~~f~i~vng-~~~~~ 101 (128)
T smart00276 71 FPFQPGQPFDLTIIVQPDHFQIFVNG-VHITT 101 (128)
T ss_pred CCCCCCCEEEEEEEEcCCEEEEEECC-EeEEE
Confidence 45556789999999999999999995 55433
No 91
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=30.77 E-value=2.7e+02 Score=26.99 Aligned_cols=88 Identities=15% Similarity=0.147 Sum_probs=50.1
Q ss_pred ceEEEcCCCceeeCCCCCCCCCeecCcceeecCCCcEEEEEEeecCCce-EEEEEEeCCCCCCeEcceeeecCCCCCceE
Q 012389 54 LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTG-ISLVYQTTDFKTYELLDEYLHAVPGTGMWE 132 (464)
Q Consensus 54 ~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv~ga~~~~~g-~~~ly~S~Dl~~W~~~g~l~~~~~~~g~wE 132 (464)
..|+-. +|++.|..++ ....||.|+. .+|+|+..........+ ..+.|.+ +.+|...+.-....... .--
T Consensus 7 ~~WtSt--g~L~~Pk~g~--~slKD~T~V~--ynGk~~VyAtt~d~~~~y~sm~f~~--Ftdws~~~sA~q~~m~~-~~v 77 (271)
T PF03664_consen 7 YRWTST--GPLAQPKSGW--VSLKDFTIVP--YNGKHHVYATTADTGGGYGSMNFGP--FTDWSQMASASQNYMDQ-SAV 77 (271)
T ss_pred ceeccC--CccccCCCCc--eeccCceEEe--ECCEEEEEEEeccCCCccceEeeec--cCCHHHhhccccccCCc-ccc
Confidence 467764 6888765554 5789999854 47887766443321222 2333443 45676655432111111 133
Q ss_pred eceEEEecccCccceeecCCCCCeEEEEEEe
Q 012389 133 CVDFYPVAINGSVGLDTSATGPGIKHVLKAS 163 (464)
Q Consensus 133 CPdlf~l~~~~~~~l~~~~~g~~~~~vl~~s 163 (464)
.|.+|-.. ++.+|||...
T Consensus 78 AP~vFYFa-------------Pk~~W~L~yQ 95 (271)
T PF03664_consen 78 APQVFYFA-------------PKNIWYLAYQ 95 (271)
T ss_pred cceEEEec-------------CCcEEEEEEe
Confidence 58888885 4569999765
No 92
>PF15092 UPF0728: Uncharacterised protein family UPF0728
Probab=25.97 E-value=1.3e+02 Score=24.11 Aligned_cols=30 Identities=23% Similarity=0.408 Sum_probs=25.2
Q ss_pred cCCeEEEEEEEecceEEEEEeCCeeEEEEEe
Q 012389 389 QGEKLSMRILVDHSIVESFGQGGRTVITSRI 419 (464)
Q Consensus 389 ~~~~~~LrIfvD~S~vEvF~N~G~~~~T~rv 419 (464)
++-.+.|+=.-|..++|+-+| ||.++...|
T Consensus 37 dGh~v~L~~~~d~n~vel~vn-ge~VF~CnI 66 (88)
T PF15092_consen 37 DGHEVILEKIEDWNVVELVVN-GEIVFQCNI 66 (88)
T ss_pred CCcEEEEEEeccccEEEEEEC-CeEEEEeCC
Confidence 356788999999999999999 788877644
No 93
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=25.53 E-value=1e+02 Score=29.14 Aligned_cols=62 Identities=31% Similarity=0.658 Sum_probs=39.6
Q ss_pred CCCccCCCCEE--EeEEEEcCCCcEEEEEcccCCCCeeeEEEEEeC---CCCCCCcceEEEcCCCceeeC
Q 012389 3 PDQWYDINGVW--TGSATILPDGQIVMLYTGSTDKSVQVQNLAYPA---DPSDPLLLDWVKYPGNPVLVP 67 (464)
Q Consensus 3 P~~~~D~~Gv~--SGsa~~~~~g~~~~~YTg~~~~~~~~q~lA~S~---D~gd~~l~~w~k~~~~Pvi~~ 67 (464)
|.-+|+..|.| -|-||+.++|++++-|.+-..+-.-..++-+.. |.-|+ .+|+|.+ .||+..
T Consensus 182 pe~dwe~~gfwvnegpav~k~ngkifi~ysasatd~nycmgllwanen~dlldp--aswtksp-tpvf~t 248 (324)
T COG3940 182 PELDWEIKGFWVNEGPAVLKKNGKIFITYSASATDVNYCMGLLWANENSDLLDP--ASWTKSP-TPVFKT 248 (324)
T ss_pred CCcccEEEEEEecCCceEEEECCEEEEEEeccccccceeeeeeeecccCCcCCc--hhcccCC-Ccceee
Confidence 55667777855 688888789999999988664422222232222 22233 4899974 788864
No 94
>PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A.
Probab=25.44 E-value=3.7e+02 Score=26.92 Aligned_cols=99 Identities=18% Similarity=0.105 Sum_probs=54.2
Q ss_pred eEEEEcCCCcEEEEEcccCCC----CeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeecCCCcE
Q 012389 15 GSATILPDGQIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKW 90 (464)
Q Consensus 15 Gsa~~~~~g~~~~~YTg~~~~----~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~ 90 (464)
+|.+ ..+|.++++.-+.... .......+++.|.+ .+|+.+. -+......-...++-.|..+. +++.-
T Consensus 2 PSLV-~vgGvv~AvAEa~~~~~~~~~~~~ias~~~~~~g----~tw~~~~--~~~~~~~~~~~v~v~rPTtvv--kgn~I 72 (310)
T PF13859_consen 2 PSLV-EVGGVVFAVAEAQCKKSNDSGFTDIASEYSTDNG----ETWKAEV--AVLNDDGSKKRVDVSRPTTVV--KGNKI 72 (310)
T ss_dssp EEEE-EETTEEEEEEEEESS-S-SSS-EEEEEEEESSSS----SS-EEEE--EE----SS-TT-EEEEEEEEE--ETTEE
T ss_pred CCEE-EECCEEEEEEEEEEccCCCCCceeEEEeEeeccc----cccccce--eeecccccccccccceeeeee--cceeE
Confidence 4554 4699999998887532 22334556787765 7898852 122221111223455777645 37889
Q ss_pred EEEEEeecC----CceEEEEEEeCC-CCCCeEcceee
Q 012389 91 RLTIGSKIG----KTGISLVYQTTD-FKTYELLDEYL 122 (464)
Q Consensus 91 ~mv~ga~~~----~~g~~~ly~S~D-l~~W~~~g~l~ 122 (464)
||++|.... ..-.++|++|++ .+.|+....+.
T Consensus 73 ymLvG~y~~~~~~~~~~llLvks~~~g~~W~~~~~l~ 109 (310)
T PF13859_consen 73 YMLVGSYSRSAGADDWGLLLVKSTDGGIKWGDTKSLP 109 (310)
T ss_dssp EEEEEEESS--SSTTEEEEEEEEESSSSEE---EE-G
T ss_pred EEEEEEEeccccccccceeeeeccCCcceeeecccCC
Confidence 999998631 222577888765 56798766654
No 95
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=20.33 E-value=8e+02 Score=23.87 Aligned_cols=93 Identities=11% Similarity=0.167 Sum_probs=54.5
Q ss_pred EeEEEEcCCCcEEEEEcccCCCCeeeEEEEEeCCCCCCCcceEEEcCCCceeeCCCCCCCCCeecCcceeecCCCcEEEE
Q 012389 14 TGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLT 93 (464)
Q Consensus 14 SGsa~~~~~g~~~~~YTg~~~~~~~~q~lA~S~D~gd~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V~w~~~~g~~~mv 93 (464)
..++|. .||+.++|.|.+.... ....+++..= .+|......+- .+.....--|.||+..+.+.|||+
T Consensus 27 D~T~V~-ynGk~~VyAtt~d~~~-~y~sm~f~~F------tdws~~~sA~q-----~~m~~~~vAP~vFYFaPk~~W~L~ 93 (271)
T PF03664_consen 27 DFTIVP-YNGKHHVYATTADTGG-GYGSMNFGPF------TDWSQMASASQ-----NYMDQSAVAPQVFYFAPKNIWYLA 93 (271)
T ss_pred CceEEe-ECCEEEEEEEeccCCC-ccceEeeecc------CCHHHhhcccc-----ccCCcccccceEEEecCCcEEEEE
Confidence 345553 6899999999885432 2344555431 34655432221 111123457889877788899999
Q ss_pred EEeecCCceEEEEEE-eCCCC---CCeEcceeee
Q 012389 94 IGSKIGKTGISLVYQ-TTDFK---TYELLDEYLH 123 (464)
Q Consensus 94 ~ga~~~~~g~~~ly~-S~Dl~---~W~~~g~l~~ 123 (464)
+=-+ +..+-|+ |.|.. .|....+|+.
T Consensus 94 yQwg----~~~fsY~Ts~DptnpngWSapq~lf~ 123 (271)
T PF03664_consen 94 YQWG----PAAFSYSTSSDPTNPNGWSAPQPLFS 123 (271)
T ss_pred EecC----CCcceeecCCCCCCCccCCCCccccc
Confidence 7321 2334565 56654 5988888764
Done!