Query 012396
Match_columns 464
No_of_seqs 189 out of 1358
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 02:12:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012396.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012396hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 2E-115 4E-120 877.7 38.4 424 25-463 22-453 (454)
2 PLN02209 serine carboxypeptida 100.0 8E-102 2E-106 788.1 41.3 407 26-460 18-437 (437)
3 PLN03016 sinapoylglucose-malat 100.0 9E-101 2E-105 780.5 39.4 401 31-460 20-433 (433)
4 PF00450 Peptidase_S10: Serine 100.0 1.6E-99 3E-104 780.1 30.8 400 38-457 1-415 (415)
5 PTZ00472 serine carboxypeptida 100.0 8E-94 1.7E-98 738.3 35.6 400 33-461 32-462 (462)
6 PLN02213 sinapoylglucose-malat 100.0 1.3E-72 2.8E-77 557.3 30.1 314 119-460 1-319 (319)
7 COG2939 Carboxypeptidase C (ca 100.0 6.1E-67 1.3E-71 519.5 20.1 374 62-458 87-491 (498)
8 KOG1283 Serine carboxypeptidas 100.0 3.5E-67 7.7E-72 487.1 15.2 395 48-456 4-412 (414)
9 TIGR01250 pro_imino_pep_2 prol 99.3 2.6E-10 5.5E-15 109.8 19.4 129 48-215 3-132 (288)
10 TIGR03611 RutD pyrimidine util 99.2 2.5E-10 5.5E-15 108.1 16.8 116 63-216 2-117 (257)
11 TIGR03056 bchO_mg_che_rel puta 99.2 7.1E-10 1.5E-14 106.9 16.6 107 74-216 26-132 (278)
12 PRK00870 haloalkane dehalogena 99.2 2.4E-09 5.1E-14 105.5 20.4 139 31-213 8-149 (302)
13 PRK10673 acyl-CoA esterase; Pr 99.2 5.5E-10 1.2E-14 106.6 15.2 104 71-212 11-114 (255)
14 PHA02857 monoglyceride lipase; 99.2 3.4E-09 7.3E-14 102.8 20.0 125 58-216 9-134 (276)
15 PLN02824 hydrolase, alpha/beta 99.2 1.9E-09 4.1E-14 105.6 18.1 106 76-214 29-137 (294)
16 PRK03204 haloalkane dehalogena 99.1 5.2E-09 1.1E-13 102.3 20.1 121 49-214 16-136 (286)
17 PLN02298 hydrolase, alpha/beta 99.1 1.3E-08 2.9E-13 101.5 21.0 139 47-216 32-171 (330)
18 TIGR03343 biphenyl_bphD 2-hydr 99.1 2.4E-08 5.3E-13 96.8 21.9 60 368-456 222-281 (282)
19 PLN02385 hydrolase; alpha/beta 99.1 1.3E-08 2.8E-13 102.5 19.4 128 58-215 70-198 (349)
20 PRK03592 haloalkane dehalogena 99.0 7.1E-09 1.5E-13 101.6 15.4 104 76-216 27-130 (295)
21 PLN02679 hydrolase, alpha/beta 99.0 3.1E-08 6.7E-13 100.2 20.2 104 75-213 87-190 (360)
22 TIGR02427 protocat_pcaD 3-oxoa 99.0 6E-08 1.3E-12 91.0 19.7 60 368-456 192-251 (251)
23 PF12697 Abhydrolase_6: Alpha/ 98.9 2.2E-09 4.8E-14 98.9 8.1 103 79-216 1-103 (228)
24 TIGR02240 PHA_depoly_arom poly 98.9 3.4E-08 7.3E-13 95.9 16.2 117 59-215 11-127 (276)
25 PLN02894 hydrolase, alpha/beta 98.9 1.4E-07 3.1E-12 96.7 19.8 119 61-214 93-211 (402)
26 PRK14875 acetoin dehydrogenase 98.9 1E-07 2.2E-12 96.4 17.6 103 74-213 129-231 (371)
27 PLN03084 alpha/beta hydrolase 98.8 1.4E-07 3.1E-12 95.8 18.1 108 74-214 125-232 (383)
28 PRK10349 carboxylesterase BioH 98.8 5E-08 1.1E-12 93.4 14.0 94 77-212 14-107 (256)
29 TIGR01249 pro_imino_pep_1 prol 98.8 3.6E-07 7.9E-12 90.2 19.6 125 49-215 6-131 (306)
30 PRK11126 2-succinyl-6-hydroxy- 98.8 1.3E-07 2.9E-12 89.4 15.3 100 76-213 2-101 (242)
31 PLN02578 hydrolase 98.8 1.6E-07 3.4E-12 94.8 16.4 112 59-213 75-186 (354)
32 TIGR01738 bioH putative pimelo 98.8 4.5E-08 9.7E-13 91.6 11.6 59 368-455 187-245 (245)
33 PLN02652 hydrolase; alpha/beta 98.8 3.9E-07 8.5E-12 93.0 19.0 127 58-215 119-246 (395)
34 PRK10749 lysophospholipase L2; 98.8 5.5E-07 1.2E-11 90.0 18.9 125 59-215 40-167 (330)
35 PLN02965 Probable pheophorbida 98.7 2.2E-07 4.8E-12 89.1 14.3 60 368-456 192-251 (255)
36 PLN03087 BODYGUARD 1 domain co 98.7 1.7E-06 3.6E-11 90.1 21.2 133 46-212 175-307 (481)
37 TIGR03695 menH_SHCHC 2-succiny 98.7 2.1E-07 4.6E-12 86.9 13.3 105 76-214 1-105 (251)
38 KOG4409 Predicted hydrolase/ac 98.7 1.2E-06 2.7E-11 85.0 18.1 132 49-217 67-198 (365)
39 KOG4178 Soluble epoxide hydrol 98.7 1.3E-06 2.8E-11 84.4 17.1 136 46-218 21-157 (322)
40 PRK06489 hypothetical protein; 98.6 8.1E-06 1.8E-10 82.6 23.1 60 369-458 292-357 (360)
41 PRK08775 homoserine O-acetyltr 98.6 3.2E-06 6.8E-11 84.9 17.9 61 369-457 277-338 (343)
42 TIGR01607 PST-A Plasmodium sub 98.6 2.7E-06 5.8E-11 85.1 16.7 153 58-215 6-186 (332)
43 PLN02980 2-oxoglutarate decarb 98.5 1.5E-05 3.3E-10 94.8 23.2 108 72-213 1367-1479(1655)
44 PRK07581 hypothetical protein; 98.4 8.8E-06 1.9E-10 81.5 16.3 60 368-456 274-334 (339)
45 PLN02511 hydrolase 98.4 2.3E-05 5.1E-10 80.0 18.1 115 50-190 74-192 (388)
46 COG1506 DAP2 Dipeptidyl aminop 98.3 7.9E-06 1.7E-10 88.5 15.2 113 57-189 373-491 (620)
47 KOG1454 Predicted hydrolase/ac 98.3 1.8E-05 3.8E-10 78.8 15.5 60 369-457 264-323 (326)
48 PRK00175 metX homoserine O-ace 98.3 7.9E-05 1.7E-09 75.9 20.5 64 369-457 309-373 (379)
49 PF10340 DUF2424: Protein of u 98.2 3.7E-06 8.1E-11 83.6 8.3 131 62-217 106-238 (374)
50 PF00561 Abhydrolase_1: alpha/ 98.2 1.2E-06 2.6E-11 81.5 4.6 57 367-452 173-229 (230)
51 TIGR03100 hydr1_PEP hydrolase, 98.1 0.00016 3.5E-09 70.2 18.1 79 119-215 57-135 (274)
52 COG2267 PldB Lysophospholipase 98.1 9.1E-05 2E-09 72.8 14.8 133 49-217 11-145 (298)
53 PRK05855 short chain dehydroge 98.0 0.00014 3.1E-09 78.0 16.6 99 59-188 12-111 (582)
54 TIGR01392 homoserO_Ac_trn homo 98.0 0.0014 3E-08 66.1 22.6 63 369-456 288-351 (351)
55 PRK10985 putative hydrolase; P 98.0 0.00036 7.8E-09 69.5 17.1 132 52-215 36-169 (324)
56 PF00326 Peptidase_S9: Prolyl 97.8 0.0004 8.8E-09 64.5 13.2 92 118-219 13-104 (213)
57 PLN02872 triacylglycerol lipas 97.8 0.00073 1.6E-08 69.0 15.5 61 369-457 325-388 (395)
58 PLN02211 methyl indole-3-aceta 97.6 0.0002 4.3E-09 69.5 8.0 106 74-213 16-121 (273)
59 KOG1455 Lysophospholipase [Lip 97.6 0.0029 6.3E-08 60.8 15.4 130 57-214 35-164 (313)
60 TIGR01840 esterase_phb esteras 97.5 0.00041 8.8E-09 64.6 8.6 112 73-213 10-129 (212)
61 TIGR03101 hydr2_PEP hydrolase, 97.4 0.00078 1.7E-08 65.0 9.7 132 58-220 8-140 (266)
62 PRK05077 frsA fermentation/res 97.4 0.00077 1.7E-08 69.5 10.1 120 61-215 180-301 (414)
63 COG3509 LpqC Poly(3-hydroxybut 97.4 0.0029 6.4E-08 60.5 12.5 146 59-235 44-202 (312)
64 PRK11071 esterase YqiA; Provis 97.1 0.0092 2E-07 54.6 12.3 55 368-456 135-189 (190)
65 PF03583 LIP: Secretory lipase 97.1 0.018 3.8E-07 56.5 14.7 68 369-462 219-289 (290)
66 TIGR02821 fghA_ester_D S-formy 97.0 0.005 1.1E-07 59.8 10.7 50 158-216 125-175 (275)
67 PRK10566 esterase; Provisional 96.9 0.0046 1E-07 58.6 9.3 111 62-191 13-127 (249)
68 KOG1515 Arylacetamide deacetyl 96.8 0.01 2.2E-07 59.0 10.7 147 47-218 61-211 (336)
69 KOG2382 Predicted alpha/beta h 96.7 0.05 1.1E-06 53.1 14.1 60 368-456 252-311 (315)
70 TIGR01836 PHA_synth_III_C poly 96.7 0.1 2.2E-06 52.5 17.2 62 368-457 285-349 (350)
71 PRK13604 luxD acyl transferase 96.7 0.086 1.9E-06 51.7 15.8 125 58-216 18-143 (307)
72 cd00707 Pancreat_lipase_like P 96.6 0.0029 6.3E-08 61.5 5.5 112 74-213 34-146 (275)
73 COG0596 MhpC Predicted hydrola 96.6 0.0082 1.8E-07 55.4 8.2 104 76-215 21-124 (282)
74 PLN02442 S-formylglutathione h 96.5 0.0085 1.8E-07 58.5 7.9 55 152-217 127-181 (283)
75 TIGR03230 lipo_lipase lipoprot 96.5 0.011 2.3E-07 61.0 8.5 80 119-212 73-152 (442)
76 KOG2564 Predicted acetyltransf 96.4 0.0087 1.9E-07 56.8 6.5 108 74-211 72-179 (343)
77 PF07519 Tannase: Tannase and 96.4 0.19 4E-06 52.8 17.2 88 359-463 343-432 (474)
78 PRK10162 acetyl esterase; Prov 96.3 0.012 2.6E-07 58.5 7.8 60 154-216 138-197 (318)
79 TIGR01838 PHA_synth_I poly(R)- 96.0 0.16 3.6E-06 53.8 14.9 86 119-217 220-305 (532)
80 PRK10115 protease 2; Provision 96.0 0.027 5.8E-07 61.9 9.0 137 58-219 425-564 (686)
81 PF08386 Abhydrolase_4: TAP-li 95.9 0.027 5.9E-07 46.0 6.7 65 369-462 34-98 (103)
82 KOG2100 Dipeptidyl aminopeptid 95.9 0.022 4.7E-07 63.0 7.8 136 60-217 508-647 (755)
83 TIGR00976 /NonD putative hydro 95.7 0.056 1.2E-06 57.9 10.0 129 58-216 5-134 (550)
84 PRK06765 homoserine O-acetyltr 95.5 0.048 1E-06 55.7 8.1 66 368-458 322-388 (389)
85 PLN00021 chlorophyllase 95.4 0.05 1.1E-06 53.9 7.6 122 65-216 43-168 (313)
86 PF00975 Thioesterase: Thioest 95.3 0.04 8.7E-07 51.4 6.3 101 78-213 2-103 (229)
87 PF10503 Esterase_phd: Esteras 95.2 0.088 1.9E-06 49.2 8.1 43 163-214 90-132 (220)
88 PF06500 DUF1100: Alpha/beta h 94.4 0.04 8.7E-07 55.9 4.0 81 118-215 217-297 (411)
89 PF12695 Abhydrolase_5: Alpha/ 94.0 0.081 1.8E-06 45.1 4.5 93 78-213 1-94 (145)
90 PF03096 Ndr: Ndr family; Int 92.8 0.7 1.5E-05 44.6 9.2 111 75-215 22-135 (283)
91 PRK11460 putative hydrolase; P 92.7 0.12 2.6E-06 48.8 3.9 62 369-455 148-209 (232)
92 KOG4391 Predicted alpha/beta h 92.5 0.31 6.7E-06 44.8 6.0 121 59-215 64-185 (300)
93 KOG1838 Alpha/beta hydrolase [ 92.5 0.9 1.9E-05 46.1 9.8 120 62-213 107-235 (409)
94 PRK11460 putative hydrolase; P 92.0 0.53 1.1E-05 44.4 7.3 50 156-214 89-138 (232)
95 cd00312 Esterase_lipase Estera 91.1 1.1 2.5E-05 47.1 9.5 35 153-188 159-193 (493)
96 PF10230 DUF2305: Uncharacteri 91.0 1.2 2.7E-05 42.9 8.9 117 76-214 2-122 (266)
97 COG0657 Aes Esterase/lipase [L 90.4 1.8 3.9E-05 42.6 9.6 46 169-218 150-195 (312)
98 PLN02454 triacylglycerol lipas 89.8 0.8 1.7E-05 46.7 6.5 66 149-215 207-272 (414)
99 PF01764 Lipase_3: Lipase (cla 89.6 0.9 2E-05 38.7 6.0 60 151-214 47-106 (140)
100 PRK10566 esterase; Provisional 89.5 0.65 1.4E-05 43.8 5.5 62 369-457 186-247 (249)
101 PLN02211 methyl indole-3-aceta 89.3 0.81 1.8E-05 44.2 6.0 59 369-457 211-269 (273)
102 PF07859 Abhydrolase_3: alpha/ 89.1 0.64 1.4E-05 42.6 5.0 45 168-216 68-112 (211)
103 PF05990 DUF900: Alpha/beta hy 89.1 0.68 1.5E-05 43.8 5.2 69 148-216 69-139 (233)
104 PF02230 Abhydrolase_2: Phosph 89.1 1 2.2E-05 41.7 6.4 59 369-456 155-213 (216)
105 COG4099 Predicted peptidase [G 89.1 5.1 0.00011 38.9 10.8 125 57-213 169-303 (387)
106 TIGR03502 lipase_Pla1_cef extr 88.4 1.2 2.6E-05 49.3 7.1 100 75-191 448-575 (792)
107 PF05728 UPF0227: Uncharacteri 88.4 0.76 1.7E-05 41.8 4.8 51 156-220 47-97 (187)
108 KOG2183 Prolylcarboxypeptidase 88.2 1.7 3.6E-05 43.9 7.3 63 119-185 111-181 (492)
109 PRK05371 x-prolyl-dipeptidyl a 88.0 0.75 1.6E-05 51.2 5.4 84 118-216 278-375 (767)
110 KOG2931 Differentiation-relate 87.7 9.4 0.0002 37.0 11.7 32 427-458 275-306 (326)
111 cd00741 Lipase Lipase. Lipase 85.8 2.1 4.6E-05 37.2 6.1 57 151-213 11-67 (153)
112 PF05577 Peptidase_S28: Serine 85.6 3.2 6.9E-05 43.0 8.3 71 146-224 88-158 (434)
113 COG0400 Predicted esterase [Ge 85.1 3.5 7.6E-05 38.1 7.4 58 149-215 78-135 (207)
114 cd00519 Lipase_3 Lipase (class 84.6 2.2 4.8E-05 39.9 6.0 56 153-214 113-168 (229)
115 COG0596 MhpC Predicted hydrola 84.5 2.6 5.7E-05 38.3 6.4 62 366-455 218-279 (282)
116 KOG2182 Hydrolytic enzymes of 84.0 15 0.00033 38.2 11.8 103 64-185 74-186 (514)
117 PF12695 Abhydrolase_5: Alpha/ 83.4 2.1 4.6E-05 36.2 4.9 46 365-438 100-145 (145)
118 KOG2281 Dipeptidyl aminopeptid 83.1 2.4 5.1E-05 45.2 5.7 113 74-217 640-765 (867)
119 PF03283 PAE: Pectinacetyleste 82.9 12 0.00026 37.8 10.7 141 60-210 35-193 (361)
120 PRK10252 entF enterobactin syn 82.9 7.2 0.00016 46.3 10.7 102 76-212 1068-1169(1296)
121 PF05677 DUF818: Chlamydia CHL 82.8 3.4 7.4E-05 40.9 6.5 92 72-186 133-230 (365)
122 COG0400 Predicted esterase [Ge 82.8 2.5 5.4E-05 39.1 5.4 60 368-457 145-204 (207)
123 KOG3975 Uncharacterized conser 82.6 7.6 0.00016 36.8 8.3 32 359-390 231-263 (301)
124 PF02129 Peptidase_S15: X-Pro 81.8 1.7 3.7E-05 41.9 4.1 85 118-218 56-140 (272)
125 KOG1552 Predicted alpha/beta h 81.4 4.4 9.6E-05 38.5 6.4 107 75-216 59-165 (258)
126 PF10081 Abhydrolase_9: Alpha/ 81.0 3.5 7.5E-05 39.7 5.7 37 148-184 86-122 (289)
127 PF02230 Abhydrolase_2: Phosph 80.9 2.7 5.8E-05 39.0 4.9 56 152-217 88-143 (216)
128 PRK10439 enterobactin/ferric e 80.0 6.1 0.00013 40.7 7.6 36 171-214 288-323 (411)
129 PF06342 DUF1057: Alpha/beta h 79.0 14 0.00031 35.7 9.1 102 74-213 33-136 (297)
130 PLN02571 triacylglycerol lipas 78.0 5.6 0.00012 40.7 6.4 66 149-215 205-276 (413)
131 PF06057 VirJ: Bacterial virul 77.4 4.5 9.7E-05 36.8 5.0 63 146-215 46-108 (192)
132 PF11288 DUF3089: Protein of u 76.9 4.5 9.8E-05 37.3 5.0 41 150-192 76-116 (207)
133 PRK06765 homoserine O-acetyltr 76.4 3.8 8.2E-05 41.9 4.8 51 152-213 144-195 (389)
134 PLN02733 phosphatidylcholine-s 76.0 5.6 0.00012 41.3 5.9 56 126-191 127-182 (440)
135 smart00824 PKS_TE Thioesterase 75.7 13 0.00029 33.1 7.9 77 118-212 24-100 (212)
136 KOG1552 Predicted alpha/beta h 75.4 3.9 8.5E-05 38.8 4.2 59 370-457 193-251 (258)
137 COG0429 Predicted hydrolase of 74.7 31 0.00067 34.2 10.2 124 59-213 60-185 (345)
138 COG2272 PnbA Carboxylesterase 74.7 8.2 0.00018 40.1 6.6 32 155-187 165-196 (491)
139 COG3208 GrsT Predicted thioest 74.6 13 0.00028 35.1 7.3 59 369-456 176-234 (244)
140 PLN02753 triacylglycerol lipas 72.2 9.1 0.0002 40.2 6.3 68 148-215 287-360 (531)
141 PRK05077 frsA fermentation/res 71.5 8.6 0.00019 39.7 6.1 57 369-457 355-411 (414)
142 PF00151 Lipase: Lipase; Inte 71.2 1.4 3E-05 44.0 0.2 102 74-194 69-173 (331)
143 KOG4627 Kynurenine formamidase 71.2 3.5 7.5E-05 37.9 2.6 74 129-216 101-174 (270)
144 PRK04940 hypothetical protein; 71.0 7.2 0.00016 35.2 4.7 38 171-219 60-97 (180)
145 PLN02719 triacylglycerol lipas 70.4 10 0.00022 39.8 6.2 66 149-214 274-345 (518)
146 COG0627 Predicted esterase [Ge 69.8 24 0.00052 34.9 8.5 127 75-217 52-190 (316)
147 COG4425 Predicted membrane pro 69.8 9.6 0.00021 39.0 5.6 36 148-183 374-409 (588)
148 PF05448 AXE1: Acetyl xylan es 69.6 14 0.0003 36.8 6.8 46 160-214 164-209 (320)
149 PLN02408 phospholipase A1 69.4 12 0.00026 37.8 6.2 63 149-214 179-241 (365)
150 PF11187 DUF2974: Protein of u 69.0 9.3 0.0002 35.8 5.2 36 155-194 72-107 (224)
151 PF11144 DUF2920: Protein of u 69.0 6.5 0.00014 40.0 4.3 61 148-216 160-221 (403)
152 PF08237 PE-PPE: PE-PPE domain 68.6 20 0.00044 33.6 7.4 86 121-213 4-89 (225)
153 PLN02802 triacylglycerol lipas 68.6 11 0.00024 39.5 6.0 62 150-214 310-371 (509)
154 PF07819 PGAP1: PGAP1-like pro 67.2 34 0.00074 32.0 8.6 122 75-217 3-127 (225)
155 PLN02324 triacylglycerol lipas 66.6 15 0.00032 37.7 6.4 45 149-194 194-238 (415)
156 PLN02934 triacylglycerol lipas 64.8 16 0.00034 38.4 6.2 39 153-194 306-344 (515)
157 PLN00413 triacylglycerol lipas 64.6 8.2 0.00018 40.1 4.1 39 153-194 269-307 (479)
158 PLN02761 lipase class 3 family 63.0 17 0.00037 38.2 6.2 66 149-214 269-342 (527)
159 KOG4569 Predicted lipase [Lipi 62.7 14 0.0003 37.0 5.3 58 153-214 156-213 (336)
160 COG4782 Uncharacterized protei 62.5 13 0.00028 37.2 4.9 71 146-216 165-236 (377)
161 PF08840 BAAT_C: BAAT / Acyl-C 61.0 14 0.00031 34.2 4.8 46 159-213 10-55 (213)
162 PLN02162 triacylglycerol lipas 59.7 13 0.00028 38.6 4.5 39 153-194 263-301 (475)
163 PLN02310 triacylglycerol lipas 59.6 19 0.00042 36.8 5.7 62 150-214 187-249 (405)
164 PF06821 Ser_hydrolase: Serine 59.0 18 0.00038 32.4 4.8 43 370-442 115-157 (171)
165 COG4757 Predicted alpha/beta h 58.5 22 0.00049 33.4 5.4 67 118-188 56-122 (281)
166 PF06259 Abhydrolase_8: Alpha/ 56.8 30 0.00066 31.1 6.0 114 68-191 10-129 (177)
167 PLN03037 lipase class 3 family 56.3 24 0.00051 37.2 5.8 44 151-194 297-341 (525)
168 PLN02847 triacylglycerol lipas 55.8 22 0.00048 38.0 5.5 51 155-211 238-288 (633)
169 PLN02442 S-formylglutathione h 55.5 31 0.00067 33.4 6.4 49 367-440 215-264 (283)
170 PF08538 DUF1749: Protein of u 54.3 35 0.00076 33.5 6.3 71 146-219 82-153 (303)
171 PRK14567 triosephosphate isome 51.8 37 0.0008 32.5 6.0 59 149-216 179-237 (253)
172 KOG2551 Phospholipase/carboxyh 51.7 36 0.00078 31.7 5.6 57 369-455 163-221 (230)
173 PRK07868 acyl-CoA synthetase; 51.0 28 0.00061 40.3 6.0 59 369-456 297-359 (994)
174 COG2945 Predicted hydrolase of 50.7 18 0.00039 33.0 3.4 64 122-194 63-126 (210)
175 PF05057 DUF676: Putative seri 50.7 23 0.00049 32.9 4.3 48 148-196 56-103 (217)
176 PF12146 Hydrolase_4: Putative 50.4 80 0.0017 24.1 6.7 77 60-158 2-78 (79)
177 PF05049 IIGP: Interferon-indu 49.2 12 0.00026 37.9 2.3 57 74-132 32-97 (376)
178 PF03959 FSH1: Serine hydrolas 48.9 9.1 0.0002 35.4 1.4 48 369-445 161-208 (212)
179 KOG3079 Uridylate kinase/adeny 48.3 10 0.00022 34.3 1.4 17 74-90 5-21 (195)
180 COG3319 Thioesterase domains o 47.9 1.1E+02 0.0025 29.2 8.7 103 77-214 1-103 (257)
181 PF02450 LCAT: Lecithin:choles 47.4 24 0.00052 36.0 4.3 61 153-216 101-163 (389)
182 COG1073 Hydrolases of the alph 46.2 46 0.001 31.3 5.9 61 370-457 233-296 (299)
183 PF08840 BAAT_C: BAAT / Acyl-C 42.9 22 0.00047 32.9 2.9 48 369-439 115-163 (213)
184 PF00681 Plectin: Plectin repe 42.5 25 0.00055 23.7 2.4 33 211-243 11-43 (45)
185 PF06821 Ser_hydrolase: Serine 40.8 37 0.00079 30.3 3.9 51 157-215 42-92 (171)
186 PF01738 DLH: Dienelactone hyd 39.8 99 0.0021 28.2 6.9 47 367-438 143-189 (218)
187 PF07389 DUF1500: Protein of u 38.0 25 0.00055 27.3 2.0 34 153-194 8-41 (100)
188 PF09292 Neil1-DNA_bind: Endon 36.7 21 0.00047 23.0 1.2 12 76-87 24-35 (39)
189 KOG1516 Carboxylesterase and r 36.5 2.6E+02 0.0057 29.7 10.4 34 155-189 180-213 (545)
190 KOG2369 Lecithin:cholesterol a 36.5 43 0.00092 34.8 4.0 46 149-194 159-205 (473)
191 PLN02429 triosephosphate isome 36.2 81 0.0018 31.2 5.7 59 149-216 239-298 (315)
192 PF12740 Chlorophyllase2: Chlo 35.7 58 0.0013 31.2 4.6 40 172-214 92-131 (259)
193 KOG2984 Predicted hydrolase [G 35.5 30 0.00064 31.9 2.4 105 59-194 30-137 (277)
194 PRK07868 acyl-CoA synthetase; 34.8 1.8E+02 0.0039 33.8 9.3 38 170-214 140-177 (994)
195 COG2819 Predicted hydrolase of 34.2 42 0.00091 32.2 3.3 55 151-214 113-172 (264)
196 COG3571 Predicted hydrolase of 33.8 51 0.0011 29.2 3.5 28 167-194 85-112 (213)
197 PF03403 PAF-AH_p_II: Platelet 33.7 23 0.00051 36.0 1.7 38 172-218 229-266 (379)
198 PRK14566 triosephosphate isome 33.2 81 0.0018 30.3 5.1 59 149-216 189-247 (260)
199 PF10142 PhoPQ_related: PhoPQ- 31.9 1.3E+02 0.0027 30.6 6.5 93 316-462 235-328 (367)
200 KOG3724 Negative regulator of 31.7 70 0.0015 35.5 4.8 40 148-187 153-198 (973)
201 COG3208 GrsT Predicted thioest 31.4 85 0.0018 29.7 4.8 90 73-194 4-97 (244)
202 PF15613 WHIM2: WSTF, HB1, Itc 31.0 93 0.002 20.3 3.5 28 60-87 11-38 (38)
203 PF06028 DUF915: Alpha/beta hy 30.5 85 0.0018 30.0 4.8 66 367-458 182-255 (255)
204 PF01083 Cutinase: Cutinase; 29.6 1.2E+02 0.0027 27.1 5.5 81 121-216 41-125 (179)
205 PF10503 Esterase_phd: Esteras 29.2 63 0.0014 30.2 3.6 28 369-396 169-196 (220)
206 KOG2565 Predicted hydrolases o 28.4 1.4E+02 0.0031 30.2 6.0 114 75-217 152-267 (469)
207 PLN02561 triosephosphate isome 28.4 1.2E+02 0.0027 28.9 5.5 58 150-216 181-239 (253)
208 TIGR01840 esterase_phb esteras 28.4 79 0.0017 28.8 4.1 31 370-400 169-199 (212)
209 PRK05371 x-prolyl-dipeptidyl a 28.0 1.7E+02 0.0037 32.8 7.4 29 368-396 454-482 (767)
210 KOG3043 Predicted hydrolase re 27.7 1.3E+02 0.0028 28.3 5.2 73 368-456 163-238 (242)
211 PLN02517 phosphatidylcholine-s 27.3 64 0.0014 34.8 3.6 22 170-191 212-233 (642)
212 PF00756 Esterase: Putative es 26.7 29 0.00063 32.5 0.9 49 160-217 104-153 (251)
213 PRK06762 hypothetical protein; 26.3 39 0.00084 29.5 1.6 16 77-92 2-17 (166)
214 COG3545 Predicted esterase of 26.1 75 0.0016 28.6 3.3 36 170-213 58-93 (181)
215 COG1647 Esterase/lipase [Gener 24.9 1.3E+02 0.0028 28.2 4.7 60 370-456 182-242 (243)
216 cd00311 TIM Triosephosphate is 24.7 1.9E+02 0.0042 27.4 6.1 57 150-216 177-234 (242)
217 PF03959 FSH1: Serine hydrolas 24.3 1E+02 0.0022 28.3 4.1 125 75-216 3-147 (212)
218 PF04446 Thg1: tRNAHis guanyly 24.2 89 0.0019 26.8 3.3 52 122-180 23-74 (135)
219 PF07849 DUF1641: Protein of u 24.0 37 0.00079 22.7 0.7 16 317-332 16-31 (42)
220 PRK00042 tpiA triosephosphate 22.8 2.3E+02 0.0049 27.0 6.2 58 149-216 180-238 (250)
221 PRK10115 protease 2; Provision 21.7 1.8E+02 0.0038 32.3 5.9 28 369-396 605-633 (686)
222 COG2945 Predicted hydrolase of 21.7 66 0.0014 29.4 2.1 40 175-214 39-78 (210)
223 PF07224 Chlorophyllase: Chlor 21.3 1E+02 0.0023 29.7 3.4 37 171-213 120-156 (307)
224 PF14020 DUF4236: Protein of u 21.2 73 0.0016 22.7 1.8 15 121-136 40-54 (55)
225 TIGR02821 fghA_ester_D S-formy 21.2 1.4E+02 0.0031 28.4 4.6 50 369-443 211-261 (275)
226 TIGR03712 acc_sec_asp2 accesso 21.1 3.5E+02 0.0077 28.5 7.4 114 61-217 277-393 (511)
227 COG3896 Chloramphenicol 3-O-ph 20.4 60 0.0013 28.8 1.5 27 76-103 22-52 (205)
228 PF06309 Torsin: Torsin; Inte 20.2 87 0.0019 26.5 2.4 20 73-92 49-68 (127)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-115 Score=877.71 Aligned_cols=424 Identities=45% Similarity=0.857 Sum_probs=373.7
Q ss_pred hhcccccCccccCCCCC-CCCceeEEeEEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcc
Q 012396 25 EAYASLLDRITALPGQP-QVGFQQYSGYVTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFR 103 (464)
Q Consensus 25 ~~~~~~~~~v~~lpg~~-~~~~~~ysGyl~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~ 103 (464)
...+. .|+|++|||++ +++|++|||||+|+++.+++|||||+||+++|+++||||||||||||||+. |+|+|+|||+
T Consensus 22 ~~~~~-~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~ 99 (454)
T KOG1282|consen 22 HHVDE-ADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFR 99 (454)
T ss_pred cccch-hhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeE
Confidence 35556 89999999998 689999999999998889999999999999999999999999999999998 9999999999
Q ss_pred cC--CCcccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccc
Q 012396 104 PN--GQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYA 181 (464)
Q Consensus 104 ~~--~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYg 181 (464)
++ +.+|..|+|||||.||||||||||||||||+++..++. .+|+.+|+|++.||++||++||||++|+|||+|||||
T Consensus 100 v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~-~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYA 178 (454)
T KOG1282|consen 100 VKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYK-TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYA 178 (454)
T ss_pred EcCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCc-CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEeccccc
Confidence 98 45899999999999999999999999999998887776 4899999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHhccc--cccccceeeecCCCccCcccccchhHHHhhhccCCChHHHHHHHhhcchhhhhhhhh-cCC
Q 012396 182 GHYIPQLADLMLEFNKK--EELFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDATYTMFTSFCNYSRYVSEYY-RGS 258 (464)
Q Consensus 182 G~yvP~~a~~i~~~n~~--~~~inLkGi~IGng~~dp~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~-~~~ 258 (464)
|||||++|++|++.|+. ...|||||++||||++|+..+..++.+|+|.||+|++++++.+++.|+.... .+. ..+
T Consensus 179 G~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~--~~~~~~~ 256 (454)
T KOG1282|consen 179 GHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSD--NYANVDP 256 (454)
T ss_pred ceehHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcc--cccccCC
Confidence 99999999999999874 3479999999999999999999999999999999999999999999996432 111 123
Q ss_pred CChHHHHHHHHHHHHhcccCcccccccccccccccccccccCCcccCCccccCCcchhhhhccCcHHHHHHhccCccccc
Q 012396 259 VSPICSRVMSLVSRETSRFVDKYDVTLDVCISSVLSQSKVLTPKQVGETTVDVCVEDETVNYLNRKDVQKALHARLVGVR 338 (464)
Q Consensus 259 ~~~~C~~~~~~~~~~~~~~~n~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~YLN~~~Vr~aLhv~~~~~~ 338 (464)
.+..|.++++........+++.|++..+.|.... +.. ..+.+ ....++|.++..+.|||+++||+||||+....+
T Consensus 257 ~~~~C~~~~~~~~~~~~~~i~~y~i~~~~C~~~~--~~~-~~~~~--~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~ 331 (454)
T KOG1282|consen 257 SNTKCNKAVEEFDSKTTGDIDNYYILTPDCYPTS--YEL-KKPTD--CYGYDPCLSDYAEKYLNRPEVRKALHANKTSIG 331 (454)
T ss_pred chhHHHHHHHHHHHHHhccCchhhhcchhhcccc--ccc-ccccc--ccccCCchhhhHHHhcCCHHHHHHhCCCCCCCC
Confidence 3678999998887555557899999888897511 000 00101 115678988767999999999999999865433
Q ss_pred ccceecccccccccCcCCChHHHHHHHHhcC-ccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecC-cee
Q 012396 339 SWAVCSNILDYELLDLEIPTITIVGKLVKAG-IPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEG-QQV 416 (464)
Q Consensus 339 ~w~~cs~~v~~~~~d~~~~~~~~l~~LL~~~-irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~-~~v 416 (464)
+|+.||+.+.....+...++++.+..++.++ +|||||+||.|++||+.||++||+.| +++...+|+||+.+ +||
T Consensus 332 ~W~~Cn~~v~~~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L----~~~~~~~~~pW~~~~~qv 407 (454)
T KOG1282|consen 332 KWERCNDEVNYNYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSL----NLSITDEWRPWYHKGGQV 407 (454)
T ss_pred cccccChhhhcccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhc----cCccccCccCCccCCCce
Confidence 7999999997666667778999999999865 99999999999999999999999954 57888999999985 899
Q ss_pred eeEEEEeCCeeEEEEEcCCcccccCCCcHHHHHHHHHHHcCCCCCCC
Q 012396 417 GGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKAFLDSRPLPEA 463 (464)
Q Consensus 417 ~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~~al~mi~~fl~~~~l~~~ 463 (464)
|||+++|++ |||+||+|||||||.|||++|++||++||.|+++|..
T Consensus 408 aG~~~~Y~~-ltf~tVrGaGH~VP~~~p~~al~m~~~fl~g~~l~~~ 453 (454)
T KOG1282|consen 408 AGYTKTYGG-LTFATVRGAGHMVPYDKPESALIMFQRFLNGQPLPST 453 (454)
T ss_pred eeeEEEecC-EEEEEEeCCcccCCCCCcHHHHHHHHHHHcCCCCCCC
Confidence 999999999 9999999999999999999999999999999999874
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=7.7e-102 Score=788.07 Aligned_cols=407 Identities=29% Similarity=0.575 Sum_probs=337.8
Q ss_pred hcccccCccccCCCCC-CCCceeEEeEEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCccc
Q 012396 26 AYASLLDRITALPGQP-QVGFQQYSGYVTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRP 104 (464)
Q Consensus 26 ~~~~~~~~v~~lpg~~-~~~~~~ysGyl~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~ 104 (464)
+++. .|+|++|||++ ++++++||||++|+++.+++||||||||+++|+++|++|||||||||||+. |+|.|+|||++
T Consensus 18 ~~~~-~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~-g~f~e~GP~~~ 95 (437)
T PLN02209 18 HVRS-GSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLS-GLFFENGPLAL 95 (437)
T ss_pred cCCc-cCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhh-hHHHhcCCcee
Confidence 5566 89999999985 789999999999987778999999999999999999999999999999997 99999999999
Q ss_pred CC-------CcccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEe
Q 012396 105 NG-------QVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITG 177 (464)
Q Consensus 105 ~~-------~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~G 177 (464)
+. .++++|++||++.|||||||||+||||||+++...+. +++++|+++++||+.||++||+|+++|+||+|
T Consensus 96 ~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~G 173 (437)
T PLN02209 96 KNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERT--SDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVG 173 (437)
T ss_pred ccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhCccccCCCEEEEe
Confidence 72 2789999999999999999999999999987654442 55677899999999999999999999999999
Q ss_pred eccccccHHHHHHHHHHhccc--cccccceeeecCCCccCcccccchhHHHhhhccCCChHHHHHHHhhcchhhhhhhhh
Q 012396 178 ESYAGHYIPQLADLMLEFNKK--EELFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDATYTMFTSFCNYSRYVSEYY 255 (464)
Q Consensus 178 ESYgG~yvP~~a~~i~~~n~~--~~~inLkGi~IGng~~dp~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~ 255 (464)
|||||||||.+|.+|+++|++ ...||||||+||||++||..|..++.+|+|.+|+|++++|+.+++.|......
T Consensus 174 ESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~---- 249 (437)
T PLN02209 174 DSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFS---- 249 (437)
T ss_pred cCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhccccccc----
Confidence 999999999999999998753 23799999999999999999999999999999999999999999998731100
Q ss_pred cCCCChHHHHHHHHHHHHhcccCcccccccccccccccccccccCCcccCCccccCCcc---hhhhhccCcHHHHHHhcc
Q 012396 256 RGSVSPICSRVMSLVSRETSRFVDKYDVTLDVCISSVLSQSKVLTPKQVGETTVDVCVE---DETVNYLNRKDVQKALHA 332 (464)
Q Consensus 256 ~~~~~~~C~~~~~~~~~~~~~~~n~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~~c~~---~~~~~YLN~~~Vr~aLhv 332 (464)
..+....|.++++++... ...++.|+.....|...... ....+|.+ ..+..|||+++||+||||
T Consensus 250 ~~~~~~~C~~~i~~~~~~-~~~~~~~~~~~~~c~~~~~~------------~~~~~c~~~~~~~~~~ylN~~~V~~aL~v 316 (437)
T PLN02209 250 VDPSNKKCLKLVEEYHKC-TDNINSHHTLIANCDDSNTQ------------HISPDCYYYPYHLVECWANNESVREALHV 316 (437)
T ss_pred CCCChHHHHHHHHHHHHH-hhcCCccccccccccccccc------------cCCCCcccccHHHHHHHhCCHHHHHHhCC
Confidence 112356798877664332 23467776555567532110 01234533 347899999999999999
Q ss_pred CcccccccceecccccccccCcCCChHHHHHHHHhcCccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeec
Q 012396 333 RLVGVRSWAVCSNILDYELLDLEIPTITIVGKLVKAGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFE 412 (464)
Q Consensus 333 ~~~~~~~w~~cs~~v~~~~~d~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~ 412 (464)
+......|..|+..+.+ ..|.+ +..+.+..+|++++|||||+||.|++||+.|+++|+++| +|+...+|++|+.
T Consensus 317 ~~~~~~~w~~~~~~~~~-~~d~~-~~~~~~~~~l~~girVLiY~GD~D~icn~~Gte~wi~~L----~w~~~~~~~~w~~ 390 (437)
T PLN02209 317 DKGSIGEWIRDHRGIPY-KSDIR-SSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSL----NYSIIDDWRPWMI 390 (437)
T ss_pred CCCCCCCCccccchhhc-ccchh-hhHHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhc----CCccCCCeeeeEE
Confidence 85334479999875533 23433 344444455568999999999999999999999999965 4556678999999
Q ss_pred CceeeeEEEEeCCeeEEEEEcCCcccccCCCcHHHHHHHHHHHcCCCC
Q 012396 413 GQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKAFLDSRPL 460 (464)
Q Consensus 413 ~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~~al~mi~~fl~~~~l 460 (464)
+++++||+|+++|+|||++|+||||||| |||++|++||++||.+++|
T Consensus 391 ~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 391 KGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred CCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHHHHHcCCCC
Confidence 9999999999985599999999999998 7999999999999999875
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=8.6e-101 Score=780.47 Aligned_cols=401 Identities=31% Similarity=0.615 Sum_probs=338.0
Q ss_pred cCccccCCCCC-CCCceeEEeEEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccC----
Q 012396 31 LDRITALPGQP-QVGFQQYSGYVTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPN---- 105 (464)
Q Consensus 31 ~~~v~~lpg~~-~~~~~~ysGyl~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~---- 105 (464)
.+.|++|||+. ++++++||||++|+++.+++||||||||+++|+++|+||||||||||||+. |+|+|+|||+++
T Consensus 20 ~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~-g~~~e~GP~~~~~~~~ 98 (433)
T PLN03016 20 ASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLG-GIIFENGPVGLKFEVF 98 (433)
T ss_pred cCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHH-HHHHhcCCceeecccc
Confidence 78999999975 788999999999987778899999999999999999999999999999997 999999999975
Q ss_pred -C--CcccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeecccc
Q 012396 106 -G--QVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAG 182 (464)
Q Consensus 106 -~--~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG 182 (464)
+ .++++|++||++.|||||||||+||||||+++...+. +|+++|+++++||+.||++||+|+++|+||+||||||
T Consensus 99 ~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG 176 (433)
T PLN03016 99 NGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSG 176 (433)
T ss_pred CCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccc
Confidence 1 3789999999999999999999999999987654432 5667779999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHhcccc--ccccceeeecCCCccCcccccchhHHHhhhccCCChHHHHHHHhhcchhhhhhhhhcCCCC
Q 012396 183 HYIPQLADLMLEFNKKE--ELFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDATYTMFTSFCNYSRYVSEYYRGSVS 260 (464)
Q Consensus 183 ~yvP~~a~~i~~~n~~~--~~inLkGi~IGng~~dp~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~~~ 260 (464)
||||++|.+|+++|++. ..||||||+||||+++|..|..++.+|+|.||+|++++++.+++.|...... .....
T Consensus 177 ~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~----~~~~~ 252 (433)
T PLN03016 177 MIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYN----VDPSN 252 (433)
T ss_pred eehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhcccccc----CCCch
Confidence 99999999999988642 3799999999999999999999999999999999999999999999732100 01235
Q ss_pred hHHHHHHHHHHHHhcccCcccccccccccccccccccccCCcccCCccccCCcc---hhhhhccCcHHHHHHhccCcccc
Q 012396 261 PICSRVMSLVSRETSRFVDKYDVTLDVCISSVLSQSKVLTPKQVGETTVDVCVE---DETVNYLNRKDVQKALHARLVGV 337 (464)
Q Consensus 261 ~~C~~~~~~~~~~~~~~~n~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~~c~~---~~~~~YLN~~~Vr~aLhv~~~~~ 337 (464)
..|..++...... .+.+|.|+++.+.|..... ..+.|.. ..++.|||+++||+||||+....
T Consensus 253 ~~C~~~~~~~~~~-~~~~n~yni~~~~~~~~~~--------------~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~ 317 (433)
T PLN03016 253 TQCLKLTEEYHKC-TAKINIHHILTPDCDVTNV--------------TSPDCYYYPYHLIECWANDESVREALHIEKGSK 317 (433)
T ss_pred HHHHHHHHHHHHH-hcCCChhhccCCccccccc--------------CCCcccccchHHHHHHhCCHHHHHHhCCCCCCC
Confidence 6798877654333 3567899988665642110 1134543 24789999999999999975323
Q ss_pred cccceecccccccccCcCCChHHHHHHHHhcCccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceee
Q 012396 338 RSWAVCSNILDYELLDLEIPTITIVGKLVKAGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVG 417 (464)
Q Consensus 338 ~~w~~cs~~v~~~~~d~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~ 417 (464)
..|..|+..+.+. .|.. +.++.+..++++++|||||+||.|++||+.|+++|+++| +|+...+|++|+.+++++
T Consensus 318 ~~w~~cn~~v~~~-~d~~-~~~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L----~w~~~~~~~~w~~~~~~~ 391 (433)
T PLN03016 318 GKWARCNRTIPYN-HDIV-SSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSL----NYSPIHNWRPWMINNQIA 391 (433)
T ss_pred CCCccCCcccccc-cccc-hhhHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhC----CCCCCCCcccccCCCEee
Confidence 4899999887533 3333 345555556667999999999999999999999999965 555667899999999999
Q ss_pred eEEEEeCCeeEEEEEcCCcccccCCCcHHHHHHHHHHHcCCCC
Q 012396 418 GWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKAFLDSRPL 460 (464)
Q Consensus 418 Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~~al~mi~~fl~~~~l 460 (464)
||+|+|+|+|||++|++|||||| |||++|++||++||++++|
T Consensus 392 G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 392 GYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQRWISGQPL 433 (433)
T ss_pred eEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHHHHHcCCCC
Confidence 99999975699999999999998 7999999999999999875
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=1.6e-99 Score=780.12 Aligned_cols=400 Identities=39% Similarity=0.732 Sum_probs=320.6
Q ss_pred CCCC-CCCceeEEeEEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccC--C-CcccccC
Q 012396 38 PGQP-QVGFQQYSGYVTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPN--G-QVLVRNE 113 (464)
Q Consensus 38 pg~~-~~~~~~ysGyl~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~--~-~~~~~n~ 113 (464)
||.. ++++++|||||+|+++.+++||||||||+++|+++|||||||||||||||. |+|.|+|||+++ + .+++.|+
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~-g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMW-GLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THH-HHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceecccc-ccccccCceEEeecccccccccc
Confidence 7765 789999999999987788999999999999999999999999999999998 999999999998 3 5899999
Q ss_pred CCcccccceEEEeCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHH
Q 012396 114 YSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLML 193 (464)
Q Consensus 114 ~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~ 193 (464)
+||+++||||||||||||||||+.+...+.. +++++|+++++||+.|+++||+++++|+||+||||||||||.+|.+|+
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~-~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYVW-NDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS--SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeeccccccccc-hhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 9999999999999999999999987665544 889999999999999999999999999999999999999999999999
Q ss_pred Hhcccc--ccccceeeecCCCccCcccccchhHHHhhhccCCChHHHHHHHhhcchhhhhhhhhcCCCChHHHHHHHHHH
Q 012396 194 EFNKKE--ELFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDATYTMFTSFCNYSRYVSEYYRGSVSPICSRVMSLVS 271 (464)
Q Consensus 194 ~~n~~~--~~inLkGi~IGng~~dp~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~~~~~C~~~~~~~~ 271 (464)
++|... ..||||||+||||++||..|..++.+|+|.||+|++++++.+.+.|+... .+ ......|..+...+.
T Consensus 159 ~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~---~~--~~~~~~c~~~~~~~~ 233 (415)
T PF00450_consen 159 QQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACP---QC--QKAITECAAALDELS 233 (415)
T ss_dssp HHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSH---SS--SCCHHHHHHHHHHHH
T ss_pred hccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccc---cc--cchhhHHHHHHHhhh
Confidence 988653 37999999999999999999999999999999999999999999886431 11 123567887777665
Q ss_pred HH-----hcccCcccccccccccccccccccccCCcccCCccccCCcchhhhhccCcHHHHHHhccCcccccccceeccc
Q 012396 272 RE-----TSRFVDKYDVTLDVCISSVLSQSKVLTPKQVGETTVDVCVEDETVNYLNRKDVQKALHARLVGVRSWAVCSNI 346 (464)
Q Consensus 272 ~~-----~~~~~n~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~YLN~~~Vr~aLhv~~~~~~~w~~cs~~ 346 (464)
.. ...++|.||++.++|..+.. ........+++..+.+..|||+++||++|||+......|+.|++.
T Consensus 234 ~~~~~~~~~~~~n~Ydi~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~~~w~~~~~~ 305 (415)
T PF00450_consen 234 CQYAISQCNGGINPYDIRQPCYNPSRS--------SYDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDSNVNWQSCNDA 305 (415)
T ss_dssp HHCHHHHHHTTSETTSTTSEETT-SHC--------TTCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTTSSS--SB-HH
T ss_pred hhcccccccCCcceeeeeccccccccc--------cccccccccccchhhHHHHhccHHHHHhhCCCcccCCcccccCcc
Confidence 42 23589999999764431100 000000123334466899999999999999973223499999998
Q ss_pred cc--ccccCcCCChHHHHHHHHhcCccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeec--CceeeeEEEE
Q 012396 347 LD--YELLDLEIPTITIVGKLVKAGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFE--GQQVGGWTQV 422 (464)
Q Consensus 347 v~--~~~~d~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~--~~~v~Gy~k~ 422 (464)
|. ....|.+.++.+.++.||++++|||||+||+|++||+.|+++||++ ++|....+|+.|.. +++++||+|+
T Consensus 306 V~~~~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~----L~w~~~~~f~~~~~~~~~~~~G~~k~ 381 (415)
T PF00450_consen 306 VNFNWLYDDFMPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDN----LNWSGKDGFRQWPRKVNGQVAGYVKQ 381 (415)
T ss_dssp HHHHCCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHC----TECTEEEEEEEEEEETTCSEEEEEEE
T ss_pred cccccccccccccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhc----cccCcccccccccccccccccceeEE
Confidence 72 3346777889999999999999999999999999999999999995 45666778888886 8999999999
Q ss_pred eCCeeEEEEEcCCcccccCCCcHHHHHHHHHHHcC
Q 012396 423 YGNILSFATIRGASHEAPFSQPERSLVLFKAFLDS 457 (464)
Q Consensus 423 ~~n~Ltfv~V~gAGHmvP~DqP~~al~mi~~fl~~ 457 (464)
++| |||++|+|||||||+|||++|++||++||+|
T Consensus 382 ~~~-ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 382 YGN-LTFVTVRGAGHMVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp ETT-EEEEEETT--SSHHHHSHHHHHHHHHHHHCT
T ss_pred ecc-EEEEEEcCCcccChhhCHHHHHHHHHHHhcC
Confidence 999 9999999999999999999999999999986
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=8e-94 Score=738.30 Aligned_cols=400 Identities=30% Similarity=0.542 Sum_probs=338.1
Q ss_pred ccccCCCCC-CCCceeEEeEEEecC-CCCceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCC--Cc
Q 012396 33 RITALPGQP-QVGFQQYSGYVTVDE-KKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNG--QV 108 (464)
Q Consensus 33 ~v~~lpg~~-~~~~~~ysGyl~v~~-~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~--~~ 108 (464)
+.+++.... +.++++|||||+|++ ..+++||||||||+++|+++||+|||||||||||+. |+|.|||||+++. .+
T Consensus 32 ~~~~~~~~~~~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~-G~f~E~GP~~i~~~~~~ 110 (462)
T PTZ00472 32 RTTGSGWAPCDPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMF-ALLAENGPCLMNETTGD 110 (462)
T ss_pred ccCCCCccccCCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHH-hhhccCCCeEEeCCCCc
Confidence 344444433 678999999999975 457899999999999999999999999999999997 9999999999983 48
Q ss_pred ccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHH
Q 012396 109 LVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQL 188 (464)
Q Consensus 109 ~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~ 188 (464)
++.|++||++.+||||||||+||||||+... .+.. +++++|+|+++||+.|+++||+++.+++||+||||||+|+|.+
T Consensus 111 ~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~-~~~~-~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~ 188 (462)
T PTZ00472 111 IYNNTYSWNNEAYVIYVDQPAGVGFSYADKA-DYDH-NESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPAT 188 (462)
T ss_pred eeECCcccccccCeEEEeCCCCcCcccCCCC-CCCC-ChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHH
Confidence 9999999999999999999999999998654 3433 6788999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccc--ccccceeeecCCCccCcccccchhHHHhhh-------ccCCChHHHHHHHh---hcchhhhhhhhhc
Q 012396 189 ADLMLEFNKKE--ELFNLKGIALGNPVLEFATDFNSRAEFFWS-------HGLISDATYTMFTS---FCNYSRYVSEYYR 256 (464)
Q Consensus 189 a~~i~~~n~~~--~~inLkGi~IGng~~dp~~~~~~~~~~~~~-------~gli~~~~~~~~~~---~c~~~~~~~~~~~ 256 (464)
|.+|+++|+.+ ..||||||+|||||+||..|..++.+|+|. +|+|++++++.+.+ .|. +.+..|..
T Consensus 189 a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~--~~~~~c~~ 266 (462)
T PTZ00472 189 AYRINMGNKKGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQ--KKIKECNS 266 (462)
T ss_pred HHHHHhhccccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHH--HHHHhccc
Confidence 99999988653 269999999999999999999999999996 48999999998875 343 22333322
Q ss_pred C--CCChHHHHHHHHHHHHh----cccCcccccccccccccccccccccCCcccCCccccCCcc-hhhhhccCcHHHHHH
Q 012396 257 G--SVSPICSRVMSLVSRET----SRFVDKYDVTLDVCISSVLSQSKVLTPKQVGETTVDVCVE-DETVNYLNRKDVQKA 329 (464)
Q Consensus 257 ~--~~~~~C~~~~~~~~~~~----~~~~n~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~~c~~-~~~~~YLN~~~Vr~a 329 (464)
. .....|..+...|.... ..++|.||++.+ |.. ++|.+ ..++.|||+++||+|
T Consensus 267 ~~~~~~~~c~~a~~~c~~~~~~~~~~g~n~Ydi~~~-c~~-------------------~~c~~~~~~~~yLN~~~Vq~A 326 (462)
T PTZ00472 267 NPDDADSSCSVARALCNEYIAVYSATGLNNYDIRKP-CIG-------------------PLCYNMDNTIAFMNREDVQSS 326 (462)
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHhcCCChhheecc-CCC-------------------CCccCHHHHHHHhCCHHHHHH
Confidence 1 12346766655554321 356899999864 531 34654 458999999999999
Q ss_pred hccCcccccccceeccccccc-ccCcCCChHHHHHHHHhcCccEEEEEcCCCcccCchhHHHHHHHHHHh-cCCCccccc
Q 012396 330 LHARLVGVRSWAVCSNILDYE-LLDLEIPTITIVGKLVKAGIPVMVYSGDQDSVIPLTGSRKLVNGLAKE-LKLGTTVPY 407 (464)
Q Consensus 330 Lhv~~~~~~~w~~cs~~v~~~-~~d~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~-~~~~~~~~~ 407 (464)
|||+. ..|+.|+..|... ..|.+.++.+.++.||++|+|||||+||.|++||+.|+++|+++|+|. ......++|
T Consensus 327 L~v~~---~~w~~c~~~V~~~~~~D~~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~ 403 (462)
T PTZ00472 327 LGVKP---ATWQSCNMEVNLMFEMDWMKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPD 403 (462)
T ss_pred hCCCC---CCceeCCHHHHHHhhhccccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCc
Confidence 99973 3799999988543 346777888999999999999999999999999999999999999874 334456889
Q ss_pred eee-ecCceeeeEEEEeC-----CeeEEEEEcCCcccccCCCcHHHHHHHHHHHcCCCCC
Q 012396 408 RVW-FEGQQVGGWTQVYG-----NILSFATIRGASHEAPFSQPERSLVLFKAFLDSRPLP 461 (464)
Q Consensus 408 ~~w-~~~~~v~Gy~k~~~-----n~Ltfv~V~gAGHmvP~DqP~~al~mi~~fl~~~~l~ 461 (464)
++| ..+++++||+|+++ | |||++|++||||||+|||+++++|+++|+.+++++
T Consensus 404 ~~w~~~~~~v~G~vk~~~~~~~~~-l~~~~V~~AGH~vp~d~P~~~~~~i~~fl~~~~~~ 462 (462)
T PTZ00472 404 VPFSAVDGRWAGLVRSAASNTSSG-FSFVQVYNAGHMVPMDQPAVALTMINRFLRNRPLS 462 (462)
T ss_pred cccEecCCEeceEEEEEecccCCC-eEEEEECCCCccChhhHHHHHHHHHHHHHcCCCCC
Confidence 999 56889999999998 8 99999999999999999999999999999998874
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=1.3e-72 Score=557.28 Aligned_cols=314 Identities=28% Similarity=0.532 Sum_probs=255.2
Q ss_pred ccceEEEeCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccc
Q 012396 119 EANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKK 198 (464)
Q Consensus 119 ~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~ 198 (464)
.|||||||||+||||||+++...+. +|+++|+|++.||+.||++||+|+++||||+||||||||||++|.+|+++|+.
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~~--~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~ 78 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI 78 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCcc--ccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc
Confidence 4899999999999999987654442 56677799999999999999999999999999999999999999999998753
Q ss_pred c--ccccceeeecCCCccCcccccchhHHHhhhccCCChHHHHHHHhhcchhhhhhhhhcCCCChHHHHHHHHHHHHhcc
Q 012396 199 E--ELFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDATYTMFTSFCNYSRYVSEYYRGSVSPICSRVMSLVSRETSR 276 (464)
Q Consensus 199 ~--~~inLkGi~IGng~~dp~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 276 (464)
. ..||||||+|||||++|..+..++.+|+|.||+|++++++.+++.|...... + .+....|.+++...... ..
T Consensus 79 ~~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~--~--~~~~~~c~~~~~~~~~~-~~ 153 (319)
T PLN02213 79 CCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYN--V--DPSNTQCLKLTEEYHKC-TA 153 (319)
T ss_pred ccCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccC--C--CCCcHHHHHHHHHHHHH-Hh
Confidence 2 3699999999999999999999999999999999999999999988732100 0 12356798877654332 34
Q ss_pred cCcccccccccccccccccccccCCcccCCccccCCcc---hhhhhccCcHHHHHHhccCcccccccceecccccccccC
Q 012396 277 FVDKYDVTLDVCISSVLSQSKVLTPKQVGETTVDVCVE---DETVNYLNRKDVQKALHARLVGVRSWAVCSNILDYELLD 353 (464)
Q Consensus 277 ~~n~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~~c~~---~~~~~YLN~~~Vr~aLhv~~~~~~~w~~cs~~v~~~~~d 353 (464)
.+|.|+++.+.|..... ..+.|.. ..+..|||+++||+||||+.+....|..|+..+.+. .|
T Consensus 154 ~~~~~~~~~~~~~~~~~--------------~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~c~~~v~~~-~d 218 (319)
T PLN02213 154 KINIHHILTPDCDVTNV--------------TSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIPYN-HD 218 (319)
T ss_pred cCCHhhcccCcccCccC--------------CCCCcccchhHHHHHHhCCHHHHHHhCcCCCCCCCCccCCcccccc-cc
Confidence 67889887655642110 1134542 357899999999999999753223799999888633 34
Q ss_pred cCCChHHHHHHHHhcCccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEc
Q 012396 354 LEIPTITIVGKLVKAGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIR 433 (464)
Q Consensus 354 ~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~ 433 (464)
.. +..+.+..+|.+++|||||+||.|++||+.|+++|+++| +|+...+|++|+.+++++||+|+++|+|||++|+
T Consensus 219 ~~-~~~~~~~~~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L----~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~ 293 (319)
T PLN02213 219 IV-SSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSL----NYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIK 293 (319)
T ss_pred cc-cchHHHHHHHhcCceEEEEECCcCeeCCcHhHHHHHHhc----CCCCCCCCccccCCCEeeeEEEEecCcceEEEEc
Confidence 43 344455555667999999999999999999999999966 4555677999999999999999998569999999
Q ss_pred CCcccccCCCcHHHHHHHHHHHcCCCC
Q 012396 434 GASHEAPFSQPERSLVLFKAFLDSRPL 460 (464)
Q Consensus 434 gAGHmvP~DqP~~al~mi~~fl~~~~l 460 (464)
||||||| |||++|++||++||++++|
T Consensus 294 ~AGHmV~-~qP~~al~m~~~fi~~~~~ 319 (319)
T PLN02213 294 AGGHTAE-YRPNETFIMFQRWISGQPL 319 (319)
T ss_pred CCCCCCC-cCHHHHHHHHHHHHcCCCC
Confidence 9999998 7999999999999999875
No 7
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-67 Score=519.48 Aligned_cols=374 Identities=26% Similarity=0.454 Sum_probs=289.1
Q ss_pred EEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCC-cccc--cCCCcccccceEEEeCCCccccCcccC
Q 012396 62 LFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQ-VLVR--NEYSWNREANMLFLETPIGVGFSYSKD 138 (464)
Q Consensus 62 lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~-~~~~--n~~sW~~~an~l~iDqPvGtGfSy~~~ 138 (464)
+|||+|+++++|+++|+||||||||||||+. |+|.|+||.+|+.+ +... ||+||++++||||||||+|||||++..
T Consensus 87 ~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~-g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~ 165 (498)
T COG2939 87 FFFYTFESPNDPANRPVIFWLNGGPGCSSVT-GLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALG 165 (498)
T ss_pred EEEEEecCCCCCCCCceEEEecCCCChHhhh-hhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccc
Confidence 8999999999999999999999999999998 99999999999843 5555 999999999999999999999999722
Q ss_pred CCCccccChHHhHHHHHHHHHHHHHHCCCCCCC--CEEEEeeccccccHHHHHHHHHHhcccc-ccccceeeecCCC-cc
Q 012396 139 ASSYQGVGDKITARDNLVFLKNWFLKFPQYRNR--SLFITGESYAGHYIPQLADLMLEFNKKE-ELFNLKGIALGNP-VL 214 (464)
Q Consensus 139 ~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~--~~yi~GESYgG~yvP~~a~~i~~~n~~~-~~inLkGi~IGng-~~ 214 (464)
. .... +-..+.+|++.|++.|++.||++.+. |+||+||||||+|+|.||..|+++|... ..+||++++|||| +|
T Consensus 166 ~-e~~~-d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng~~t 243 (498)
T COG2939 166 D-EKKK-DFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNGLWT 243 (498)
T ss_pred c-cccc-chhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCCccc
Confidence 2 2222 45667889999999999999999887 9999999999999999999999976322 2699999999999 99
Q ss_pred CcccccchhHHHhhhcc----CCChHHHHHHHhhcchhh---hhhhhhcCCCChHHHHHHHHHHHHh-----cc---cCc
Q 012396 215 EFATDFNSRAEFFWSHG----LISDATYTMFTSFCNYSR---YVSEYYRGSVSPICSRVMSLVSRET-----SR---FVD 279 (464)
Q Consensus 215 dp~~~~~~~~~~~~~~g----li~~~~~~~~~~~c~~~~---~~~~~~~~~~~~~C~~~~~~~~~~~-----~~---~~n 279 (464)
+|..++.+|..++...+ ..+.+.++.+++.|+..- ..+.+++......|..+...|.... .. ..|
T Consensus 244 ~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~~~~~~~~~~~~r~~~~~~n 323 (498)
T COG2939 244 DPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASAYLTGLMREYVGRAGGRLLN 323 (498)
T ss_pred ChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHHHHHhcchhhhccccccccc
Confidence 99999999999988654 456677778887777432 2222222233456766655554322 12 378
Q ss_pred ccccccccccccccccccccCCcccCCccccCCcch--hhhhccCcHHHHHHhccCcccccccceecccccccc----cC
Q 012396 280 KYDVTLDVCISSVLSQSKVLTPKQVGETTVDVCVED--ETVNYLNRKDVQKALHARLVGVRSWAVCSNILDYEL----LD 353 (464)
Q Consensus 280 ~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~~c~~~--~~~~YLN~~~Vr~aLhv~~~~~~~w~~cs~~v~~~~----~d 353 (464)
.|+++.. |.... ....|+++ ....|++...+++.+... +..|..|+.++...+ .+
T Consensus 324 ~y~~r~~-~~d~g---------------~~~~~y~~~~~~ld~~~~~~~~~~~~~~---~d~~~~c~t~a~~~f~~~~~~ 384 (498)
T COG2939 324 VYDIREE-CRDPG---------------LGGSCYDTLSTSLDYFNFDPEQEVNDPE---VDNISGCTTDAMTDFLTFTGG 384 (498)
T ss_pred cccchhh-cCCCC---------------cccccccceeeccccccccchhcccccc---ccchhccchHHHHhhhhhcCC
Confidence 8888753 43211 01234443 356788888888888764 458999998874333 56
Q ss_pred cCCChHHHHHHHHhcCccEEEEEcCCCcccCchhHHHHHHHHHH--hcCCCccccceeee-cCceeeeEEEEeCCeeEEE
Q 012396 354 LEIPTITIVGKLVKAGIPVMVYSGDQDSVIPLTGSRKLVNGLAK--ELKLGTTVPYRVWF-EGQQVGGWTQVYGNILSFA 430 (464)
Q Consensus 354 ~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~--~~~~~~~~~~~~w~-~~~~v~Gy~k~~~n~Ltfv 430 (464)
+..+....+..++.+++.+++|.|+.|.+|++.|++.|..+|+| ..++...+-+--|. ...+..|-.++++| ++|+
T Consensus 385 ~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n-~~~~ 463 (498)
T COG2939 385 WAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRN-LTFL 463 (498)
T ss_pred cccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhhcCCCcccccchhhcccccccCC-ceEE
Confidence 77777778888999999999999999999999999999999987 33444322222232 13334444445557 9999
Q ss_pred EEcCCcccccCCCcHHHHHHHHHHHcCC
Q 012396 431 TIRGASHEAPFSQPERSLVLFKAFLDSR 458 (464)
Q Consensus 431 ~V~gAGHmvP~DqP~~al~mi~~fl~~~ 458 (464)
+++.||||||.|+|+.+++|++.|+.+.
T Consensus 464 r~y~aGHMvp~d~P~~~~~~~~~~~~~~ 491 (498)
T COG2939 464 RIYEAGHMVPYDRPESSLEMVNLWINGY 491 (498)
T ss_pred EEecCcceeecCChHHHHHHHHHHHhhc
Confidence 9999999999999999999999999873
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.5e-67 Score=487.09 Aligned_cols=395 Identities=26% Similarity=0.369 Sum_probs=309.3
Q ss_pred EEeEEEecCCCCceEEEEEEecCCC-CCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEe
Q 012396 48 YSGYVTVDEKKQRALFYYFAEAETD-PASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLE 126 (464)
Q Consensus 48 ysGyl~v~~~~~~~lfy~f~es~~~-~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iD 126 (464)
-.||++|+ .++|||+|++.+..+ ...+|+.+||+||||+||..+|+|+|+||...+ +++|+.+|.+.|||||||
T Consensus 4 ~wg~v~vr--~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~---~~~r~~TWlk~adllfvD 78 (414)
T KOG1283|consen 4 DWGYVDVR--TGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD---GSPRDWTWLKDADLLFVD 78 (414)
T ss_pred cccceeee--cCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC---CCcCCchhhhhccEEEec
Confidence 36999994 579999999988654 378999999999999999988999999999876 669999999999999999
Q ss_pred CCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccc-cccce
Q 012396 127 TPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEE-LFNLK 205 (464)
Q Consensus 127 qPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~-~inLk 205 (464)
.|||+||||.+..+.|++ +++++|.|+.+.|+.||..||+|+.+||||+-|||||+.++.+|..+.+..+++. ..|+.
T Consensus 79 nPVGaGfSyVdg~~~Y~~-~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~ 157 (414)
T KOG1283|consen 79 NPVGAGFSYVDGSSAYTT-NNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFI 157 (414)
T ss_pred CCCcCceeeecCcccccc-cHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecce
Confidence 999999999988877765 8999999999999999999999999999999999999999999999998877664 68999
Q ss_pred eeecCCCccCcccccchhHHHhhhccCCChHHHHHHH---hhcchhhhhhhhhcCCCC--hHHHHHHHHHHHHhcccCcc
Q 012396 206 GIALGNPVLEFATDFNSRAEFFWSHGLISDATYTMFT---SFCNYSRYVSEYYRGSVS--PICSRVMSLVSRETSRFVDK 280 (464)
Q Consensus 206 Gi~IGng~~dp~~~~~~~~~~~~~~gli~~~~~~~~~---~~c~~~~~~~~~~~~~~~--~~C~~~~~~~~~~~~~~~n~ 280 (464)
|+++|+.||+|..-+.++.+|++..+++|+...+... ++|.- ++. .+... ..|---.+-+....+.++|.
T Consensus 158 ~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~--~v~---~g~~~~AT~~Wg~~e~li~~~sn~Vdf 232 (414)
T KOG1283|consen 158 GVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKG--GVD---GGKWGGATGGWGGGENLISRESNGVDF 232 (414)
T ss_pred eEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcc--ccc---CCccccccccccCcCcceeecccCcce
Confidence 9999999999999999999999999999998776543 23321 000 11111 11111011111111357899
Q ss_pred cccccccccccccccccc-cCCc----ccCCccccCCcchhhhhccCcHHHHHHhccCcccccccceeccccc-ccccCc
Q 012396 281 YDVTLDVCISSVLSQSKV-LTPK----QVGETTVDVCVEDETVNYLNRKDVQKALHARLVGVRSWAVCSNILD-YELLDL 354 (464)
Q Consensus 281 ydi~~~~c~~~~~~~~~~-~~~~----~~~~~~~~~c~~~~~~~YLN~~~Vr~aLhv~~~~~~~w~~cs~~v~-~~~~d~ 354 (464)
|++.++.-.........+ +.+. +....-..+-..|.+++++|- .||++|++.++.+ .|...+.+++ +...|+
T Consensus 233 YNil~~t~~d~~~~ss~~~~~~~~~~rrl~~~~~~~~~~D~L~~lM~g-~vrkkLgIip~~~-~wGgqsg~vFt~lq~dF 310 (414)
T KOG1283|consen 233 YNILTKTLGDQYSLSSRAAMTPEEVMRRLLVRFVGDEDRDKLSDLMNG-PVRKKLGIIPGGV-KWGGQSGDVFTKLQGDF 310 (414)
T ss_pred eeeeccCCCcchhhhhhhhcchHHHHHHHHhccCcchhHHHHHHHhcc-cccccccccCCCC-cccCcCCchHHHhhhhh
Confidence 998765433221111000 0010 000000000112457888876 4999999976554 8998887774 567899
Q ss_pred CCChHHHHHHHHhcCccEEEEEcCCCcccCchhHHHHHHHHHHh-cCCCccccceeeecCceeeeEEEEeCCeeEEEEEc
Q 012396 355 EIPTITIVGKLVKAGIPVMVYSGDQDSVIPLTGSRKLVNGLAKE-LKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIR 433 (464)
Q Consensus 355 ~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~-~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~ 433 (464)
|.|.+..+.+||+.|++|.||+|++|.||++.|+++|++.|+|. ...+...+|...+.+...+||.|.|+| |.|..|.
T Consensus 311 MKPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktykn-l~f~wil 389 (414)
T KOG1283|consen 311 MKPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKN-LSFFWIL 389 (414)
T ss_pred cccHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhcc-ceeEEee
Confidence 99999999999999999999999999999999999999999883 333344566666677788999999999 9999999
Q ss_pred CCcccccCCCcHHHHHHHHHHHc
Q 012396 434 GASHEAPFSQPERSLVLFKAFLD 456 (464)
Q Consensus 434 gAGHmvP~DqP~~al~mi~~fl~ 456 (464)
.||||||.|+|+.|.+|++.+.+
T Consensus 390 raghmvp~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 390 RAGHMVPADNPAAASHMLRHVTK 412 (414)
T ss_pred cccCcccCCCHHHHhhheeeccc
Confidence 99999999999999999987764
No 9
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.29 E-value=2.6e-10 Score=109.78 Aligned_cols=129 Identities=21% Similarity=0.275 Sum_probs=78.4
Q ss_pred EEeEEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeC
Q 012396 48 YSGYVTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLET 127 (464)
Q Consensus 48 ysGyl~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDq 127 (464)
..++++++ +..+.|.-+. .+...|.||+++||||+++.....+.+ .+.. +..+++.+|.
T Consensus 3 ~~~~~~~~---~~~~~~~~~~---~~~~~~~vl~~hG~~g~~~~~~~~~~~---------~l~~------~g~~vi~~d~ 61 (288)
T TIGR01250 3 IEGIITVD---GGYHLFTKTG---GEGEKIKLLLLHGGPGMSHEYLENLRE---------LLKE------EGREVIMYDQ 61 (288)
T ss_pred ccceecCC---CCeEEEEecc---CCCCCCeEEEEcCCCCccHHHHHHHHH---------HHHh------cCCEEEEEcC
Confidence 45666663 2334444332 223468899999999998764222210 0111 2478999999
Q ss_pred CCccccCcccCCCC-ccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhcccccccccee
Q 012396 128 PIGVGFSYSKDASS-YQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKG 206 (464)
Q Consensus 128 PvGtGfSy~~~~~~-~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkG 206 (464)
| |.|.|....... . .+-+..++++..+++ .. ..++++|+|+|+||..+..+|..- +..+++
T Consensus 62 ~-G~G~s~~~~~~~~~--~~~~~~~~~~~~~~~----~~---~~~~~~liG~S~Gg~ia~~~a~~~--------p~~v~~ 123 (288)
T TIGR01250 62 L-GCGYSDQPDDSDEL--WTIDYFVDELEEVRE----KL---GLDKFYLLGHSWGGMLAQEYALKY--------GQHLKG 123 (288)
T ss_pred C-CCCCCCCCCccccc--ccHHHHHHHHHHHHH----Hc---CCCcEEEEEeehHHHHHHHHHHhC--------ccccce
Confidence 9 999987532211 1 133445555544433 32 345699999999999888887642 235788
Q ss_pred eecCCCccC
Q 012396 207 IALGNPVLE 215 (464)
Q Consensus 207 i~IGng~~d 215 (464)
+++.++...
T Consensus 124 lvl~~~~~~ 132 (288)
T TIGR01250 124 LIISSMLDS 132 (288)
T ss_pred eeEeccccc
Confidence 888887643
No 10
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.25 E-value=2.5e-10 Score=108.14 Aligned_cols=116 Identities=21% Similarity=0.165 Sum_probs=77.0
Q ss_pred EEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCCc
Q 012396 63 FYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSY 142 (464)
Q Consensus 63 fy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~ 142 (464)
+|..+.. ...+.|+||+++|.+|++..+ ..+. .-+.+..+++.+|.| |.|.|.......+
T Consensus 2 ~~~~~~~--~~~~~~~iv~lhG~~~~~~~~-~~~~----------------~~l~~~~~vi~~D~~-G~G~S~~~~~~~~ 61 (257)
T TIGR03611 2 HYELHGP--PDADAPVVVLSSGLGGSGSYW-APQL----------------DVLTQRFHVVTYDHR-GTGRSPGELPPGY 61 (257)
T ss_pred EEEEecC--CCCCCCEEEEEcCCCcchhHH-HHHH----------------HHHHhccEEEEEcCC-CCCCCCCCCcccC
Confidence 4555533 224689999999998877665 2211 112345799999999 9999975433222
Q ss_pred cccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 143 QGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 143 ~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
+-++.++++.++++. . ...+++|+|+|+||..+..+|.+.-+ .++++++.+++..+
T Consensus 62 ---~~~~~~~~~~~~i~~----~---~~~~~~l~G~S~Gg~~a~~~a~~~~~--------~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 62 ---SIAHMADDVLQLLDA----L---NIERFHFVGHALGGLIGLQLALRYPE--------RLLSLVLINAWSRP 117 (257)
T ss_pred ---CHHHHHHHHHHHHHH----h---CCCcEEEEEechhHHHHHHHHHHChH--------HhHHheeecCCCCC
Confidence 334556666555542 2 34579999999999988888765322 47888888876544
No 11
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.18 E-value=7.1e-10 Score=106.92 Aligned_cols=107 Identities=17% Similarity=0.052 Sum_probs=71.2
Q ss_pred CCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHhHHH
Q 012396 74 ASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARD 153 (464)
Q Consensus 74 ~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~ 153 (464)
.+.|.||+++|.+|.+..+ ..+.+ . ..+..+++.+|.| |.|.|.......+ +-+..|++
T Consensus 26 ~~~~~vv~~hG~~~~~~~~-~~~~~---------~-------l~~~~~vi~~D~~-G~G~S~~~~~~~~---~~~~~~~~ 84 (278)
T TIGR03056 26 TAGPLLLLLHGTGASTHSW-RDLMP---------P-------LARSFRVVAPDLP-GHGFTRAPFRFRF---TLPSMAED 84 (278)
T ss_pred CCCCeEEEEcCCCCCHHHH-HHHHH---------H-------HhhCcEEEeecCC-CCCCCCCccccCC---CHHHHHHH
Confidence 3468999999998877765 22211 1 1224789999999 9999875433222 33455666
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 154 NLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 154 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
+.++++. . ...+++|+|+|+||..+..+|.+. +-.++++++.++...+
T Consensus 85 l~~~i~~----~---~~~~~~lvG~S~Gg~~a~~~a~~~--------p~~v~~~v~~~~~~~~ 132 (278)
T TIGR03056 85 LSALCAA----E---GLSPDGVIGHSAGAAIALRLALDG--------PVTPRMVVGINAALMP 132 (278)
T ss_pred HHHHHHH----c---CCCCceEEEECccHHHHHHHHHhC--------CcccceEEEEcCcccc
Confidence 6655542 2 335789999999998777776542 2257889988887654
No 12
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.18 E-value=2.4e-09 Score=105.45 Aligned_cols=139 Identities=20% Similarity=0.238 Sum_probs=87.0
Q ss_pred cCccccCCCCCCCCceeEEeEEEecCCCC--ceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCc
Q 012396 31 LDRITALPGQPQVGFQQYSGYVTVDEKKQ--RALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQV 108 (464)
Q Consensus 31 ~~~v~~lpg~~~~~~~~ysGyl~v~~~~~--~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~ 108 (464)
+-++.+||..| + --.|+.++...+ ..++|.-. +++ +.|.||.++|.|+.+..+ ..+. | .
T Consensus 8 ~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~i~y~~~---G~~-~~~~lvliHG~~~~~~~w-~~~~---~------~ 68 (302)
T PRK00870 8 DSRFENLPDYP---F--APHYVDVDDGDGGPLRMHYVDE---GPA-DGPPVLLLHGEPSWSYLY-RKMI---P------I 68 (302)
T ss_pred cccccCCcCCC---C--CceeEeecCCCCceEEEEEEec---CCC-CCCEEEEECCCCCchhhH-HHHH---H------H
Confidence 45788888654 2 346788865223 34665532 333 468899999999888775 2220 1 0
Q ss_pred ccccCCCcccccceEEEeCCCccccCcccCC-CCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHH
Q 012396 109 LVRNEYSWNREANMLFLETPIGVGFSYSKDA-SSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQ 187 (464)
Q Consensus 109 ~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~-~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~ 187 (464)
+. .+..+|+.+|.| |.|.|-.... ..+ +-+..++++.++|+ .. ...++.|+|+|+||..+-.
T Consensus 69 L~------~~gy~vi~~Dl~-G~G~S~~~~~~~~~---~~~~~a~~l~~~l~----~l---~~~~v~lvGhS~Gg~ia~~ 131 (302)
T PRK00870 69 LA------AAGHRVIAPDLI-GFGRSDKPTRREDY---TYARHVEWMRSWFE----QL---DLTDVTLVCQDWGGLIGLR 131 (302)
T ss_pred HH------hCCCEEEEECCC-CCCCCCCCCCcccC---CHHHHHHHHHHHHH----Hc---CCCCEEEEEEChHHHHHHH
Confidence 11 134799999999 9999853221 122 33445555544444 32 3457999999999998877
Q ss_pred HHHHHHHhccccccccceeeecCCCc
Q 012396 188 LADLMLEFNKKEELFNLKGIALGNPV 213 (464)
Q Consensus 188 ~a~~i~~~n~~~~~inLkGi~IGng~ 213 (464)
+|.+-- -.++++++.++.
T Consensus 132 ~a~~~p--------~~v~~lvl~~~~ 149 (302)
T PRK00870 132 LAAEHP--------DRFARLVVANTG 149 (302)
T ss_pred HHHhCh--------hheeEEEEeCCC
Confidence 776421 258888887764
No 13
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.18 E-value=5.5e-10 Score=106.62 Aligned_cols=104 Identities=14% Similarity=0.183 Sum_probs=74.2
Q ss_pred CCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHh
Q 012396 71 TDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKIT 150 (464)
Q Consensus 71 ~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~ 150 (464)
.++.+.|.||+++|.+|.+..+ +.+.+ .+.+..+++.+|+| |.|.|.... .+ +-++.
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~~-~~~~~----------------~l~~~~~vi~~D~~-G~G~s~~~~--~~---~~~~~ 67 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDNL-GVLAR----------------DLVNDHDIIQVDMR-NHGLSPRDP--VM---NYPAM 67 (255)
T ss_pred CCCCCCCCEEEECCCCCchhHH-HHHHH----------------HHhhCCeEEEECCC-CCCCCCCCC--CC---CHHHH
Confidence 3566789999999999988775 33211 12345799999999 999886432 22 34556
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCC
Q 012396 151 ARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNP 212 (464)
Q Consensus 151 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng 212 (464)
++|+.+++..+ ...+++|+|+|.||..+..+|.+.-+ .++++++.++
T Consensus 68 ~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~--------~v~~lvli~~ 114 (255)
T PRK10673 68 AQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALAPD--------RIDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhCHh--------hcceEEEEec
Confidence 77887777642 33579999999999998888865322 5788887763
No 14
>PHA02857 monoglyceride lipase; Provisional
Probab=99.16 E-value=3.4e-09 Score=102.77 Aligned_cols=125 Identities=14% Similarity=0.084 Sum_probs=81.7
Q ss_pred CCceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCccc-ccceEEEeCCCccccCcc
Q 012396 58 KQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNR-EANMLFLETPIGVGFSYS 136 (464)
Q Consensus 58 ~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~-~an~l~iDqPvGtGfSy~ 136 (464)
.+..|+|.+++... ..+|+||.++|.+++|..+ -.+ -..+.+ ...++-+|.| |.|.|..
T Consensus 9 ~g~~l~~~~~~~~~--~~~~~v~llHG~~~~~~~~-~~~----------------~~~l~~~g~~via~D~~-G~G~S~~ 68 (276)
T PHA02857 9 DNDYIYCKYWKPIT--YPKALVFISHGAGEHSGRY-EEL----------------AENISSLGILVFSHDHI-GHGRSNG 68 (276)
T ss_pred CCCEEEEEeccCCC--CCCEEEEEeCCCccccchH-HHH----------------HHHHHhCCCEEEEccCC-CCCCCCC
Confidence 45679998887642 3468999999998777664 221 112333 3689999999 9999964
Q ss_pred cCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 137 KDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 137 ~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
... ... +-....+|+.+++..+.+.+ ...+++|+|+|+||.-+..+|.+- +-+++|+++.+|.+++
T Consensus 69 ~~~-~~~--~~~~~~~d~~~~l~~~~~~~---~~~~~~lvG~S~GG~ia~~~a~~~--------p~~i~~lil~~p~~~~ 134 (276)
T PHA02857 69 EKM-MID--DFGVYVRDVVQHVVTIKSTY---PGVPVFLLGHSMGATISILAAYKN--------PNLFTAMILMSPLVNA 134 (276)
T ss_pred ccC-CcC--CHHHHHHHHHHHHHHHHhhC---CCCCEEEEEcCchHHHHHHHHHhC--------ccccceEEEecccccc
Confidence 321 110 22234566666666554444 356899999999998666655431 2258999999987653
No 15
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.15 E-value=1.9e-09 Score=105.63 Aligned_cols=106 Identities=16% Similarity=0.072 Sum_probs=71.7
Q ss_pred CCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCCcc---ccChHHhHH
Q 012396 76 KPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQ---GVGDKITAR 152 (464)
Q Consensus 76 ~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~---~~~~~~~a~ 152 (464)
.|.||+++|.+++|.++ -.+.+ .+.+.++++.+|.| |.|.|...+..... ..+-++.|+
T Consensus 29 ~~~vlllHG~~~~~~~w-~~~~~----------------~L~~~~~vi~~Dlp-G~G~S~~~~~~~~~~~~~~~~~~~a~ 90 (294)
T PLN02824 29 GPALVLVHGFGGNADHW-RKNTP----------------VLAKSHRVYAIDLL-GYGYSDKPNPRSAPPNSFYTFETWGE 90 (294)
T ss_pred CCeEEEECCCCCChhHH-HHHHH----------------HHHhCCeEEEEcCC-CCCCCCCCccccccccccCCHHHHHH
Confidence 37899999999999886 32211 23445699999999 99999754321100 013344555
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 153 DNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 153 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
++.++|+. . ...+++|+|+|+||..+-.+|.+-- -.++++++.|+..
T Consensus 91 ~l~~~l~~----l---~~~~~~lvGhS~Gg~va~~~a~~~p--------~~v~~lili~~~~ 137 (294)
T PLN02824 91 QLNDFCSD----V---VGDPAFVICNSVGGVVGLQAAVDAP--------ELVRGVMLINISL 137 (294)
T ss_pred HHHHHHHH----h---cCCCeEEEEeCHHHHHHHHHHHhCh--------hheeEEEEECCCc
Confidence 65555553 3 2468999999999998877776532 2589999988754
No 16
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.13 E-value=5.2e-09 Score=102.34 Aligned_cols=121 Identities=18% Similarity=0.200 Sum_probs=72.3
Q ss_pred EeEEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCC
Q 012396 49 SGYVTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETP 128 (464)
Q Consensus 49 sGyl~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqP 128 (464)
+.+++++ +..++|-- .+ ..|.||.++|.|..+..+ -.+. ..+.+..+++.+|.|
T Consensus 16 ~~~~~~~---~~~i~y~~---~G---~~~~iv~lHG~~~~~~~~-~~~~----------------~~l~~~~~vi~~D~~ 69 (286)
T PRK03204 16 SRWFDSS---RGRIHYID---EG---TGPPILLCHGNPTWSFLY-RDII----------------VALRDRFRCVAPDYL 69 (286)
T ss_pred ceEEEcC---CcEEEEEE---CC---CCCEEEEECCCCccHHHH-HHHH----------------HHHhCCcEEEEECCC
Confidence 4577773 34455432 22 257899999998655544 1110 123345899999999
Q ss_pred CccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeee
Q 012396 129 IGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIA 208 (464)
Q Consensus 129 vGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~ 208 (464)
|.|.|-......+ +-+..++++ ..+.+.. ...+++|+|+|+||.-+-.+|..- +-.+++++
T Consensus 70 -G~G~S~~~~~~~~---~~~~~~~~~----~~~~~~~---~~~~~~lvG~S~Gg~va~~~a~~~--------p~~v~~lv 130 (286)
T PRK03204 70 -GFGLSERPSGFGY---QIDEHARVI----GEFVDHL---GLDRYLSMGQDWGGPISMAVAVER--------ADRVRGVV 130 (286)
T ss_pred -CCCCCCCCCcccc---CHHHHHHHH----HHHHHHh---CCCCEEEEEECccHHHHHHHHHhC--------hhheeEEE
Confidence 9999854322122 223334444 4444433 335799999999997655444321 23688999
Q ss_pred cCCCcc
Q 012396 209 LGNPVL 214 (464)
Q Consensus 209 IGng~~ 214 (464)
++++..
T Consensus 131 l~~~~~ 136 (286)
T PRK03204 131 LGNTWF 136 (286)
T ss_pred EECccc
Confidence 887653
No 17
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.09 E-value=1.3e-08 Score=101.50 Aligned_cols=139 Identities=17% Similarity=0.188 Sum_probs=84.6
Q ss_pred eEEeEEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCccc-ccceEEE
Q 012396 47 QYSGYVTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNR-EANMLFL 125 (464)
Q Consensus 47 ~ysGyl~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~-~an~l~i 125 (464)
...+++... .+..++|+.+........+|+||+++|..+.++-.+-. -...+.+ -.+|+-+
T Consensus 32 ~~~~~~~~~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~----------------~~~~L~~~Gy~V~~~ 93 (330)
T PLN02298 32 GSKSFFTSP--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQS----------------TAIFLAQMGFACFAL 93 (330)
T ss_pred cccceEEcC--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhH----------------HHHHHHhCCCEEEEe
Confidence 346677663 45678886553322223568999999985433211000 0012333 5899999
Q ss_pred eCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccce
Q 012396 126 ETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLK 205 (464)
Q Consensus 126 DqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLk 205 (464)
|+| |.|.|.... .+.. +-+..++|+..+++..... .++...+++|+|+|+||..+..+|.+ . +-.++
T Consensus 94 D~r-GhG~S~~~~--~~~~-~~~~~~~D~~~~i~~l~~~-~~~~~~~i~l~GhSmGG~ia~~~a~~----~----p~~v~ 160 (330)
T PLN02298 94 DLE-GHGRSEGLR--AYVP-NVDLVVEDCLSFFNSVKQR-EEFQGLPRFLYGESMGGAICLLIHLA----N----PEGFD 160 (330)
T ss_pred cCC-CCCCCCCcc--ccCC-CHHHHHHHHHHHHHHHHhc-ccCCCCCEEEEEecchhHHHHHHHhc----C----cccce
Confidence 999 999985322 1111 3345677777777654432 22334579999999999877655432 1 22589
Q ss_pred eeecCCCccCc
Q 012396 206 GIALGNPVLEF 216 (464)
Q Consensus 206 Gi~IGng~~dp 216 (464)
|+++.+++...
T Consensus 161 ~lvl~~~~~~~ 171 (330)
T PLN02298 161 GAVLVAPMCKI 171 (330)
T ss_pred eEEEecccccC
Confidence 99999887643
No 18
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.08 E-value=2.4e-08 Score=96.79 Aligned_cols=60 Identities=20% Similarity=0.263 Sum_probs=50.3
Q ss_pred cCccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCcHHH
Q 012396 368 AGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERS 447 (464)
Q Consensus 368 ~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~~a 447 (464)
-..+||+..|..|.+++..-.+.+.+.+ .+ .+++.|.+|||+++.++|+..
T Consensus 222 i~~Pvlli~G~~D~~v~~~~~~~~~~~~----------------------------~~-~~~~~i~~agH~~~~e~p~~~ 272 (282)
T TIGR03343 222 IKAKTLVTWGRDDRFVPLDHGLKLLWNM----------------------------PD-AQLHVFSRCGHWAQWEHADAF 272 (282)
T ss_pred CCCCEEEEEccCCCcCCchhHHHHHHhC----------------------------CC-CEEEEeCCCCcCCcccCHHHH
Confidence 3589999999999999976666555422 24 777899999999999999999
Q ss_pred HHHHHHHHc
Q 012396 448 LVLFKAFLD 456 (464)
Q Consensus 448 l~mi~~fl~ 456 (464)
.+++.+|+.
T Consensus 273 ~~~i~~fl~ 281 (282)
T TIGR03343 273 NRLVIDFLR 281 (282)
T ss_pred HHHHHHHhh
Confidence 999999985
No 19
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.05 E-value=1.3e-08 Score=102.46 Aligned_cols=128 Identities=16% Similarity=0.155 Sum_probs=79.8
Q ss_pred CCceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCccc-ccceEEEeCCCccccCcc
Q 012396 58 KQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNR-EANMLFLETPIGVGFSYS 136 (464)
Q Consensus 58 ~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~-~an~l~iDqPvGtGfSy~ 136 (464)
.+..+|+..+...+ .+.+|+||+++|..+.++..+-.+ -..+.+ -.+|+-+|.| |.|.|-.
T Consensus 70 ~g~~l~~~~~~p~~-~~~~~~iv~lHG~~~~~~~~~~~~----------------~~~l~~~g~~v~~~D~~-G~G~S~~ 131 (349)
T PLN02385 70 RGVEIFSKSWLPEN-SRPKAAVCFCHGYGDTCTFFFEGI----------------ARKIASSGYGVFAMDYP-GFGLSEG 131 (349)
T ss_pred CCCEEEEEEEecCC-CCCCeEEEEECCCCCccchHHHHH----------------HHHHHhCCCEEEEecCC-CCCCCCC
Confidence 45678876654322 245799999999876555321100 012332 4789999999 9999964
Q ss_pred cCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccC
Q 012396 137 KDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (464)
Q Consensus 137 ~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~d 215 (464)
.. .+.. +-+..++|+.++++.. ...+++...+++|+|+|+||..+..+|.+- +-.++|+++.+|...
T Consensus 132 ~~--~~~~-~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG~val~~a~~~--------p~~v~glVLi~p~~~ 198 (349)
T PLN02385 132 LH--GYIP-SFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGGAVALKVHLKQ--------PNAWDGAILVAPMCK 198 (349)
T ss_pred CC--CCcC-CHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccchHHHHHHHHhC--------cchhhheeEeccccc
Confidence 32 1211 3344566776666543 333345566899999999998776655431 225889999887653
No 20
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.01 E-value=7.1e-09 Score=101.63 Aligned_cols=104 Identities=17% Similarity=0.147 Sum_probs=71.9
Q ss_pred CCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHhHHHHH
Q 012396 76 KPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNL 155 (464)
Q Consensus 76 ~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~ 155 (464)
.|.||+++|.|+.+..+ -.+. -.+.+...++-+|.| |.|.|..... .+ +-+..|+|+.
T Consensus 27 g~~vvllHG~~~~~~~w-~~~~----------------~~L~~~~~via~D~~-G~G~S~~~~~-~~---~~~~~a~dl~ 84 (295)
T PRK03592 27 GDPIVFLHGNPTSSYLW-RNII----------------PHLAGLGRCLAPDLI-GMGASDKPDI-DY---TFADHARYLD 84 (295)
T ss_pred CCEEEEECCCCCCHHHH-HHHH----------------HHHhhCCEEEEEcCC-CCCCCCCCCC-CC---CHHHHHHHHH
Confidence 47899999999888776 2221 123334589999999 9999964332 23 3345566665
Q ss_pred HHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 156 VFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 156 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
.+++. . ...+++|.|+|.||..+-.+|.+-- -.++++++.++...+
T Consensus 85 ~ll~~----l---~~~~~~lvGhS~Gg~ia~~~a~~~p--------~~v~~lil~~~~~~~ 130 (295)
T PRK03592 85 AWFDA----L---GLDDVVLVGHDWGSALGFDWAARHP--------DRVRGIAFMEAIVRP 130 (295)
T ss_pred HHHHH----h---CCCCeEEEEECHHHHHHHHHHHhCh--------hheeEEEEECCCCCC
Confidence 55553 2 3468999999999988877775532 258999999986544
No 21
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.01 E-value=3.1e-08 Score=100.19 Aligned_cols=104 Identities=19% Similarity=0.083 Sum_probs=67.0
Q ss_pred CCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHhHHHH
Q 012396 75 SKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDN 154 (464)
Q Consensus 75 ~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~ 154 (464)
+.|.||.++|.|+.+..+ ..+. . ...+...++.+|.| |.|.|.......+ +-+..++++
T Consensus 87 ~gp~lvllHG~~~~~~~w-~~~~-------------~---~L~~~~~via~Dl~-G~G~S~~~~~~~~---~~~~~a~~l 145 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHW-RRNI-------------G---VLAKNYTVYAIDLL-GFGASDKPPGFSY---TMETWAELI 145 (360)
T ss_pred CCCeEEEECCCCCCHHHH-HHHH-------------H---HHhcCCEEEEECCC-CCCCCCCCCCccc---cHHHHHHHH
Confidence 347889999999888776 2211 0 12345799999999 9999864322222 334556666
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCc
Q 012396 155 LVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (464)
Q Consensus 155 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~ 213 (464)
.++|+. +...+++|+|+|+||..+-.+|..- . +-.++|+++.|+.
T Consensus 146 ~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~--~-----P~rV~~LVLi~~~ 190 (360)
T PLN02679 146 LDFLEE-------VVQKPTVLIGNSVGSLACVIAASES--T-----RDLVRGLVLLNCA 190 (360)
T ss_pred HHHHHH-------hcCCCeEEEEECHHHHHHHHHHHhc--C-----hhhcCEEEEECCc
Confidence 666653 2345899999999996554444321 1 1258899988864
No 22
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.98 E-value=6e-08 Score=90.95 Aligned_cols=60 Identities=32% Similarity=0.481 Sum_probs=49.8
Q ss_pred cCccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCcHHH
Q 012396 368 AGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERS 447 (464)
Q Consensus 368 ~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~~a 447 (464)
-..+|++.+|+.|.+++....+.+.+.+ .+ .+++.+.++||+++.++|++.
T Consensus 192 ~~~Pvlii~g~~D~~~~~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~~~~p~~~ 242 (251)
T TIGR02427 192 IAVPTLCIAGDQDGSTPPELVREIADLV----------------------------PG-ARFAEIRGAGHIPCVEQPEAF 242 (251)
T ss_pred cCCCeEEEEeccCCcCChHHHHHHHHhC----------------------------CC-ceEEEECCCCCcccccChHHH
Confidence 3589999999999999987666555421 24 667889999999999999999
Q ss_pred HHHHHHHHc
Q 012396 448 LVLFKAFLD 456 (464)
Q Consensus 448 l~mi~~fl~ 456 (464)
.+.++.|+.
T Consensus 243 ~~~i~~fl~ 251 (251)
T TIGR02427 243 NAALRDFLR 251 (251)
T ss_pred HHHHHHHhC
Confidence 999999974
No 23
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.94 E-value=2.2e-09 Score=98.92 Aligned_cols=103 Identities=23% Similarity=0.265 Sum_probs=69.3
Q ss_pred EEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHhHHHHHHHH
Q 012396 79 VLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFL 158 (464)
Q Consensus 79 ~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL 158 (464)
||+++|+++.+..+ ..+.+ .+.+..+++.+|.| |.|.|..... +...+-++.++++.++|
T Consensus 1 vv~~hG~~~~~~~~-~~~~~----------------~l~~~~~v~~~d~~-G~G~s~~~~~--~~~~~~~~~~~~l~~~l 60 (228)
T PF12697_consen 1 VVFLHGFGGSSESW-DPLAE----------------ALARGYRVIAFDLP-GHGRSDPPPD--YSPYSIEDYAEDLAELL 60 (228)
T ss_dssp EEEE-STTTTGGGG-HHHHH----------------HHHTTSEEEEEECT-TSTTSSSHSS--GSGGSHHHHHHHHHHHH
T ss_pred eEEECCCCCCHHHH-HHHHH----------------HHhCCCEEEEEecC-Cccccccccc--cCCcchhhhhhhhhhcc
Confidence 68999999988775 22211 11267789999999 9999976442 11113344455555444
Q ss_pred HHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 159 KNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 159 ~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
+... ..+++|+|+|+||..+-.+|.+. +-.++|+++.++....
T Consensus 61 ----~~~~---~~~~~lvG~S~Gg~~a~~~a~~~--------p~~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 61 ----DALG---IKKVILVGHSMGGMIALRLAARY--------PDRVKGLVLLSPPPPL 103 (228)
T ss_dssp ----HHTT---TSSEEEEEETHHHHHHHHHHHHS--------GGGEEEEEEESESSSH
T ss_pred ----cccc---ccccccccccccccccccccccc--------ccccccceeecccccc
Confidence 4442 26899999999999888877553 2269999999988754
No 24
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.92 E-value=3.4e-08 Score=95.88 Aligned_cols=117 Identities=18% Similarity=0.140 Sum_probs=75.3
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccC
Q 012396 59 QRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKD 138 (464)
Q Consensus 59 ~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~ 138 (464)
+..+.||..+. . ...|.||+++|-++.+..+ ..+.+ . ..+..+++.+|.| |.|.|-...
T Consensus 11 ~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~w-~~~~~--------------~--L~~~~~vi~~Dl~-G~G~S~~~~ 69 (276)
T TIGR02240 11 GQSIRTAVRPG--K-EGLTPLLIFNGIGANLELV-FPFIE--------------A--LDPDLEVIAFDVP-GVGGSSTPR 69 (276)
T ss_pred CcEEEEEEecC--C-CCCCcEEEEeCCCcchHHH-HHHHH--------------H--hccCceEEEECCC-CCCCCCCCC
Confidence 45688877542 2 2346789999877766665 22211 1 1245799999999 999996432
Q ss_pred CCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccC
Q 012396 139 ASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (464)
Q Consensus 139 ~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~d 215 (464)
..+ +-+..++++.+++.. . .-.+++|+|+|+||..+-.+|.+-- -.++++++.|+...
T Consensus 70 -~~~---~~~~~~~~~~~~i~~----l---~~~~~~LvG~S~GG~va~~~a~~~p--------~~v~~lvl~~~~~~ 127 (276)
T TIGR02240 70 -HPY---RFPGLAKLAARMLDY----L---DYGQVNAIGVSWGGALAQQFAHDYP--------ERCKKLILAATAAG 127 (276)
T ss_pred -CcC---cHHHHHHHHHHHHHH----h---CcCceEEEEECHHHHHHHHHHHHCH--------HHhhheEEeccCCc
Confidence 222 223345555555443 2 2357999999999997777775432 25899999987754
No 25
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.88 E-value=1.4e-07 Score=96.68 Aligned_cols=119 Identities=12% Similarity=0.051 Sum_probs=74.7
Q ss_pred eEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCC
Q 012396 61 ALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDAS 140 (464)
Q Consensus 61 ~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~ 140 (464)
.+....++. +.+.|.||.++|.++.++.+ .-. -..+.+..+|+-+|.| |.|.|.....
T Consensus 93 ~~~~~~~~~---~~~~p~vvllHG~~~~~~~~-~~~----------------~~~L~~~~~vi~~D~r-G~G~S~~~~~- 150 (402)
T PLN02894 93 FINTVTFDS---KEDAPTLVMVHGYGASQGFF-FRN----------------FDALASRFRVIAIDQL-GWGGSSRPDF- 150 (402)
T ss_pred eEEEEEecC---CCCCCEEEEECCCCcchhHH-HHH----------------HHHHHhCCEEEEECCC-CCCCCCCCCc-
Confidence 454444442 24679999999998866654 111 1123345789999999 9999853221
Q ss_pred CccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 141 SYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 141 ~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
.+ .+.++..+.+.+.+..|.+.. ...+++|+|+|+||..+-.+|.+- +-.++++++.++.-
T Consensus 151 ~~--~~~~~~~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~--------p~~v~~lvl~~p~~ 211 (402)
T PLN02894 151 TC--KSTEETEAWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKH--------PEHVQHLILVGPAG 211 (402)
T ss_pred cc--ccHHHHHHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhC--------chhhcEEEEECCcc
Confidence 11 122333344555666666644 234799999999998777666542 23588888887753
No 26
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.86 E-value=1e-07 Score=96.40 Aligned_cols=103 Identities=18% Similarity=0.110 Sum_probs=66.3
Q ss_pred CCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHhHHH
Q 012396 74 ASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARD 153 (464)
Q Consensus 74 ~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~ 153 (464)
.+.|.+|+++|.+|++..+ ..+.+ ...+..+++-+|.| |.|.|-.... .. +-+..+++
T Consensus 129 ~~~~~vl~~HG~~~~~~~~-~~~~~----------------~l~~~~~v~~~d~~-g~G~s~~~~~-~~---~~~~~~~~ 186 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNW-LFNHA----------------ALAAGRPVIALDLP-GHGASSKAVG-AG---SLDELAAA 186 (371)
T ss_pred CCCCeEEEECCCCCccchH-HHHHH----------------HHhcCCEEEEEcCC-CCCCCCCCCC-CC---CHHHHHHH
Confidence 4468899999999888775 33211 11223789999999 9998853221 11 33344444
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCc
Q 012396 154 NLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (464)
Q Consensus 154 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~ 213 (464)
+..++ +.+ ...+++|.|+|+||..+..+|..- +-.++++++.+|.
T Consensus 187 ~~~~~----~~~---~~~~~~lvG~S~Gg~~a~~~a~~~--------~~~v~~lv~~~~~ 231 (371)
T PRK14875 187 VLAFL----DAL---GIERAHLVGHSMGGAVALRLAARA--------PQRVASLTLIAPA 231 (371)
T ss_pred HHHHH----Hhc---CCccEEEEeechHHHHHHHHHHhC--------chheeEEEEECcC
Confidence 44444 333 345799999999999988877652 2247777776654
No 27
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.85 E-value=1.4e-07 Score=95.76 Aligned_cols=108 Identities=15% Similarity=0.128 Sum_probs=67.7
Q ss_pred CCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHhHHH
Q 012396 74 ASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARD 153 (464)
Q Consensus 74 ~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~ 153 (464)
.+.|.||.++|.|+.+..+ --+. . ...+..+|+-+|.| |.|.|.......-...+-+..+++
T Consensus 125 ~~~~~ivllHG~~~~~~~w-~~~~--------------~--~L~~~~~Via~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~ 186 (383)
T PLN03084 125 NNNPPVLLIHGFPSQAYSY-RKVL--------------P--VLSKNYHAIAFDWL-GFGFSDKPQPGYGFNYTLDEYVSS 186 (383)
T ss_pred CCCCeEEEECCCCCCHHHH-HHHH--------------H--HHhcCCEEEEECCC-CCCCCCCCcccccccCCHHHHHHH
Confidence 3568999999999877665 2111 1 12345799999999 999997543210001133444555
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 154 NLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 154 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
+.++++. . ...+++|+|+|+||..+-.+|.+- +-.++++++.|+..
T Consensus 187 l~~~i~~----l---~~~~~~LvG~s~GG~ia~~~a~~~--------P~~v~~lILi~~~~ 232 (383)
T PLN03084 187 LESLIDE----L---KSDKVSLVVQGYFSPPVVKYASAH--------PDKIKKLILLNPPL 232 (383)
T ss_pred HHHHHHH----h---CCCCceEEEECHHHHHHHHHHHhC--------hHhhcEEEEECCCC
Confidence 5555543 2 335799999999986544444321 22589999998764
No 28
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.84 E-value=5e-08 Score=93.43 Aligned_cols=94 Identities=14% Similarity=0.051 Sum_probs=63.5
Q ss_pred CEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHhHHHHHH
Q 012396 77 PLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLV 156 (464)
Q Consensus 77 Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~ 156 (464)
|.||.++|.++++..+ -.+ -..+.+..+++.+|.| |.|.|...+ .+ +-++.++++.+
T Consensus 14 ~~ivllHG~~~~~~~w-~~~----------------~~~L~~~~~vi~~Dl~-G~G~S~~~~--~~---~~~~~~~~l~~ 70 (256)
T PRK10349 14 VHLVLLHGWGLNAEVW-RCI----------------DEELSSHFTLHLVDLP-GFGRSRGFG--AL---SLADMAEAVLQ 70 (256)
T ss_pred CeEEEECCCCCChhHH-HHH----------------HHHHhcCCEEEEecCC-CCCCCCCCC--CC---CHHHHHHHHHh
Confidence 5699999988888776 211 1123466899999999 999996422 22 33334444321
Q ss_pred HHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCC
Q 012396 157 FLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNP 212 (464)
Q Consensus 157 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng 212 (464)
+...+++++|+|+||..+..+|.+- +-.++++++.|+
T Consensus 71 -----------~~~~~~~lvGhS~Gg~ia~~~a~~~--------p~~v~~lili~~ 107 (256)
T PRK10349 71 -----------QAPDKAIWLGWSLGGLVASQIALTH--------PERVQALVTVAS 107 (256)
T ss_pred -----------cCCCCeEEEEECHHHHHHHHHHHhC--------hHhhheEEEecC
Confidence 1235799999999999888777532 235888888776
No 29
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.82 E-value=3.6e-07 Score=90.19 Aligned_cols=125 Identities=20% Similarity=0.296 Sum_probs=77.1
Q ss_pred EeEEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcc-cccceEEEeC
Q 012396 49 SGYVTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWN-REANMLFLET 127 (464)
Q Consensus 49 sGyl~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~-~~an~l~iDq 127 (464)
.+|+.+.+ +..++|+-. +++. .|-||+++||||.++.. ... ..|. +..+|+-+|+
T Consensus 6 ~~~~~~~~--~~~l~y~~~---g~~~-~~~lvllHG~~~~~~~~-~~~-----------------~~~~~~~~~vi~~D~ 61 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS---GNPD-GKPVVFLHGGPGSGTDP-GCR-----------------RFFDPETYRIVLFDQ 61 (306)
T ss_pred CCeEEcCC--CcEEEEEEC---cCCC-CCEEEEECCCCCCCCCH-HHH-----------------hccCccCCEEEEECC
Confidence 47888853 567877543 2233 34578899999976542 110 0121 4579999999
Q ss_pred CCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceee
Q 012396 128 PIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGI 207 (464)
Q Consensus 128 PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi 207 (464)
| |.|.|..... ... .+.++.++++ ..+.+.. ...+++++|+||||..+-.+|.+-- -.++++
T Consensus 62 ~-G~G~S~~~~~-~~~-~~~~~~~~dl----~~l~~~l---~~~~~~lvG~S~GG~ia~~~a~~~p--------~~v~~l 123 (306)
T TIGR01249 62 R-GCGKSTPHAC-LEE-NTTWDLVADI----EKLREKL---GIKNWLVFGGSWGSTLALAYAQTHP--------EVVTGL 123 (306)
T ss_pred C-CCCCCCCCCC-ccc-CCHHHHHHHH----HHHHHHc---CCCCEEEEEECHHHHHHHHHHHHCh--------Hhhhhh
Confidence 9 9999974321 111 1223344444 3444433 3357999999999987777765532 257888
Q ss_pred ecCCCccC
Q 012396 208 ALGNPVLE 215 (464)
Q Consensus 208 ~IGng~~d 215 (464)
++.+..+.
T Consensus 124 vl~~~~~~ 131 (306)
T TIGR01249 124 VLRGIFLL 131 (306)
T ss_pred eeeccccC
Confidence 88876654
No 30
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.81 E-value=1.3e-07 Score=89.44 Aligned_cols=100 Identities=20% Similarity=0.185 Sum_probs=67.2
Q ss_pred CCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHhHHHHH
Q 012396 76 KPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNL 155 (464)
Q Consensus 76 ~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~ 155 (464)
.|.||+++|.||++..+ -.+ .... +..+++.+|.| |.|.|...... +-+..|+++.
T Consensus 2 ~p~vvllHG~~~~~~~w-~~~--------------~~~l---~~~~vi~~D~~-G~G~S~~~~~~-----~~~~~~~~l~ 57 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDW-QPV--------------GEAL---PDYPRLYIDLP-GHGGSAAISVD-----GFADVSRLLS 57 (242)
T ss_pred CCEEEEECCCCCChHHH-HHH--------------HHHc---CCCCEEEecCC-CCCCCCCcccc-----CHHHHHHHHH
Confidence 58899999999988776 221 1112 34899999999 99999642211 3344555555
Q ss_pred HHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCc
Q 012396 156 VFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (464)
Q Consensus 156 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~ 213 (464)
++|. . +...+++++|+|+||..+-.+|.+... -.++++++.++.
T Consensus 58 ~~l~----~---~~~~~~~lvG~S~Gg~va~~~a~~~~~-------~~v~~lvl~~~~ 101 (242)
T PRK11126 58 QTLQ----S---YNILPYWLVGYSLGGRIAMYYACQGLA-------GGLCGLIVEGGN 101 (242)
T ss_pred HHHH----H---cCCCCeEEEEECHHHHHHHHHHHhCCc-------ccccEEEEeCCC
Confidence 5554 3 244689999999999888777765311 127788887654
No 31
>PLN02578 hydrolase
Probab=98.80 E-value=1.6e-07 Score=94.79 Aligned_cols=112 Identities=17% Similarity=0.141 Sum_probs=72.0
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccC
Q 012396 59 QRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKD 138 (464)
Q Consensus 59 ~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~ 138 (464)
+.+++|.-.. +.|-||.++|-++.+..+ ... -| ...+..+++.+|.| |.|.|-...
T Consensus 75 ~~~i~Y~~~g------~g~~vvliHG~~~~~~~w-~~~---~~-------------~l~~~~~v~~~D~~-G~G~S~~~~ 130 (354)
T PLN02578 75 GHKIHYVVQG------EGLPIVLIHGFGASAFHW-RYN---IP-------------ELAKKYKVYALDLL-GFGWSDKAL 130 (354)
T ss_pred CEEEEEEEcC------CCCeEEEECCCCCCHHHH-HHH---HH-------------HHhcCCEEEEECCC-CCCCCCCcc
Confidence 3556665322 235578999877665544 111 11 12345889999999 999886432
Q ss_pred CCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCc
Q 012396 139 ASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (464)
Q Consensus 139 ~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~ 213 (464)
..| +.+..++++.+|++.. ...+++|+|+|+||..+..+|.+--+ .++++++.|+.
T Consensus 131 -~~~---~~~~~a~~l~~~i~~~-------~~~~~~lvG~S~Gg~ia~~~A~~~p~--------~v~~lvLv~~~ 186 (354)
T PLN02578 131 -IEY---DAMVWRDQVADFVKEV-------VKEPAVLVGNSLGGFTALSTAVGYPE--------LVAGVALLNSA 186 (354)
T ss_pred -ccc---CHHHHHHHHHHHHHHh-------ccCCeEEEEECHHHHHHHHHHHhChH--------hcceEEEECCC
Confidence 223 3344566666666643 24689999999999987777775432 68889888764
No 32
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.79 E-value=4.5e-08 Score=91.56 Aligned_cols=59 Identities=20% Similarity=0.201 Sum_probs=48.6
Q ss_pred cCccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCcHHH
Q 012396 368 AGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERS 447 (464)
Q Consensus 368 ~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~~a 447 (464)
-..+||+.+|..|.+++....+.+.+.+ .+ -++..+.+|||+++.++|++.
T Consensus 187 i~~Pvlii~g~~D~~~~~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~~e~p~~~ 237 (245)
T TIGR01738 187 ISVPFLRLYGYLDGLVPAKVVPYLDKLA----------------------------PH-SELYIFAKAAHAPFLSHAEAF 237 (245)
T ss_pred CCCCEEEEeecCCcccCHHHHHHHHHhC----------------------------CC-CeEEEeCCCCCCccccCHHHH
Confidence 3589999999999999987766554421 14 566889999999999999999
Q ss_pred HHHHHHHH
Q 012396 448 LVLFKAFL 455 (464)
Q Consensus 448 l~mi~~fl 455 (464)
.+.+.+||
T Consensus 238 ~~~i~~fi 245 (245)
T TIGR01738 238 CALLVAFK 245 (245)
T ss_pred HHHHHhhC
Confidence 99999986
No 33
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.79 E-value=3.9e-07 Score=93.02 Aligned_cols=127 Identities=20% Similarity=0.204 Sum_probs=82.0
Q ss_pred CCceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcc-cccceEEEeCCCccccCcc
Q 012396 58 KQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWN-REANMLFLETPIGVGFSYS 136 (464)
Q Consensus 58 ~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~-~~an~l~iDqPvGtGfSy~ 136 (464)
.+..+|++.++... .+.+|+||+++|.++.+..+ -.+. ..+. +-.+++-+|.| |.|.|-.
T Consensus 119 ~~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~~-~~~a----------------~~L~~~Gy~V~~~D~r-GhG~S~~ 179 (395)
T PLN02652 119 RRNALFCRSWAPAA-GEMRGILIIIHGLNEHSGRY-LHFA----------------KQLTSCGFGVYAMDWI-GHGGSDG 179 (395)
T ss_pred CCCEEEEEEecCCC-CCCceEEEEECCchHHHHHH-HHHH----------------HHHHHCCCEEEEeCCC-CCCCCCC
Confidence 34578877775532 33478999999998766653 1110 1122 35689999999 9999865
Q ss_pred cCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccC
Q 012396 137 KDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (464)
Q Consensus 137 ~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~d 215 (464)
... +.. +-+..++|+..+++..-..+| ..+++|+|+|+||..+..+|. +.+. .-.++|+++.+|++.
T Consensus 180 ~~~--~~~-~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~p~~--~~~v~glVL~sP~l~ 246 (395)
T PLN02652 180 LHG--YVP-SLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----YPSI--EDKLEGIVLTSPALR 246 (395)
T ss_pred CCC--CCc-CHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----ccCc--ccccceEEEECcccc
Confidence 322 211 334456677777776665565 347999999999987665442 1110 125889999988864
No 34
>PRK10749 lysophospholipase L2; Provisional
Probab=98.76 E-value=5.5e-07 Score=89.96 Aligned_cols=125 Identities=13% Similarity=0.026 Sum_probs=77.8
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCc-ccccceEEEeCCCccccCccc
Q 012396 59 QRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSW-NREANMLFLETPIGVGFSYSK 137 (464)
Q Consensus 59 ~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW-~~~an~l~iDqPvGtGfSy~~ 137 (464)
+..++|+.+... ..+|+||.++|-.+.+... .-+ .+ .+ .+..+++-+|.| |.|.|...
T Consensus 40 g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~y-~~~---~~-------------~l~~~g~~v~~~D~~-G~G~S~~~ 98 (330)
T PRK10749 40 DIPIRFVRFRAP---HHDRVVVICPGRIESYVKY-AEL---AY-------------DLFHLGYDVLIIDHR-GQGRSGRL 98 (330)
T ss_pred CCEEEEEEccCC---CCCcEEEEECCccchHHHH-HHH---HH-------------HHHHCCCeEEEEcCC-CCCCCCCC
Confidence 456888877642 3468999999986655443 111 10 11 134689999999 99999632
Q ss_pred CCCCcc--ccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccC
Q 012396 138 DASSYQ--GVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (464)
Q Consensus 138 ~~~~~~--~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~d 215 (464)
...... ..+-+..++|+..+++...+.+ ...+++++|+|+||..+-.+|.+- +-.++|+++.+|...
T Consensus 99 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~~~l~GhSmGG~ia~~~a~~~--------p~~v~~lvl~~p~~~ 167 (330)
T PRK10749 99 LDDPHRGHVERFNDYVDDLAAFWQQEIQPG---PYRKRYALAHSMGGAILTLFLQRH--------PGVFDAIALCAPMFG 167 (330)
T ss_pred CCCCCcCccccHHHHHHHHHHHHHHHHhcC---CCCCeEEEEEcHHHHHHHHHHHhC--------CCCcceEEEECchhc
Confidence 211000 0122445666666666554433 346899999999998776665431 225789999988753
No 35
>PLN02965 Probable pheophorbidase
Probab=98.73 E-value=2.2e-07 Score=89.09 Aligned_cols=60 Identities=13% Similarity=0.179 Sum_probs=49.8
Q ss_pred cCccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCcHHH
Q 012396 368 AGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERS 447 (464)
Q Consensus 368 ~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~~a 447 (464)
..+++|+..|..|.+++....+...+.+ .+ -+++.+.+|||++..++|++.
T Consensus 192 i~vP~lvi~g~~D~~~~~~~~~~~~~~~----------------------------~~-a~~~~i~~~GH~~~~e~p~~v 242 (255)
T PLN02965 192 EKVPRVYIKTAKDNLFDPVRQDVMVENW----------------------------PP-AQTYVLEDSDHSAFFSVPTTL 242 (255)
T ss_pred CCCCEEEEEcCCCCCCCHHHHHHHHHhC----------------------------Cc-ceEEEecCCCCchhhcCHHHH
Confidence 4689999999999999986665555422 23 566888999999999999999
Q ss_pred HHHHHHHHc
Q 012396 448 LVLFKAFLD 456 (464)
Q Consensus 448 l~mi~~fl~ 456 (464)
..++.+|+.
T Consensus 243 ~~~l~~~~~ 251 (255)
T PLN02965 243 FQYLLQAVS 251 (255)
T ss_pred HHHHHHHHH
Confidence 999999985
No 36
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.71 E-value=1.7e-06 Score=90.08 Aligned_cols=133 Identities=16% Similarity=0.148 Sum_probs=81.2
Q ss_pred eeEEeEEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEE
Q 012396 46 QQYSGYVTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFL 125 (464)
Q Consensus 46 ~~ysGyl~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~i 125 (464)
+.-.-|++.+ +..+||+...... ....|.||+++|.+|.++.+ .... =| .+.. .+.+...++.+
T Consensus 175 ~~~~~~~~~~---~~~l~~~~~gp~~-~~~k~~VVLlHG~~~s~~~W-~~~~--~~------~L~~---~~~~~yrVia~ 238 (481)
T PLN03087 175 KFCTSWLSSS---NESLFVHVQQPKD-NKAKEDVLFIHGFISSSAFW-TETL--FP------NFSD---AAKSTYRLFAV 238 (481)
T ss_pred ceeeeeEeeC---CeEEEEEEecCCC-CCCCCeEEEECCCCccHHHH-HHHH--HH------HHHH---HhhCCCEEEEE
Confidence 3344666653 3578888776443 23347899999999988775 2100 00 0111 24556799999
Q ss_pred eCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccce
Q 012396 126 ETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLK 205 (464)
Q Consensus 126 DqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLk 205 (464)
|.| |.|.|-......+ +-++.++++. +.+.+.. ...+++|+|+|+||..+-.+|.+--+ .++
T Consensus 239 Dl~-G~G~S~~p~~~~y---tl~~~a~~l~---~~ll~~l---g~~k~~LVGhSmGG~iAl~~A~~~Pe--------~V~ 300 (481)
T PLN03087 239 DLL-GFGRSPKPADSLY---TLREHLEMIE---RSVLERY---KVKSFHIVAHSLGCILALALAVKHPG--------AVK 300 (481)
T ss_pred CCC-CCCCCcCCCCCcC---CHHHHHHHHH---HHHHHHc---CCCCEEEEEECHHHHHHHHHHHhChH--------hcc
Confidence 999 9998854322222 2233333332 2344433 34579999999999988777765322 478
Q ss_pred eeecCCC
Q 012396 206 GIALGNP 212 (464)
Q Consensus 206 Gi~IGng 212 (464)
++++.++
T Consensus 301 ~LVLi~~ 307 (481)
T PLN03087 301 SLTLLAP 307 (481)
T ss_pred EEEEECC
Confidence 8888875
No 37
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.71 E-value=2.1e-07 Score=86.94 Aligned_cols=105 Identities=22% Similarity=0.231 Sum_probs=67.4
Q ss_pred CCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHhHHHHH
Q 012396 76 KPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNL 155 (464)
Q Consensus 76 ~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~ 155 (464)
+|.||.++|.+|.+..+ -.+ ....+ +..+++-+|.| |.|.|..... ....+-++.++++
T Consensus 1 ~~~vv~~hG~~~~~~~~-~~~--------------~~~L~--~~~~v~~~d~~-g~G~s~~~~~--~~~~~~~~~~~~~- 59 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADW-QAL--------------IELLG--PHFRCLAIDLP-GHGSSQSPDE--IERYDFEEAAQDI- 59 (251)
T ss_pred CCEEEEEcCCCCchhhH-HHH--------------HHHhc--ccCeEEEEcCC-CCCCCCCCCc--cChhhHHHHHHHH-
Confidence 48899999998887765 211 11112 45799999988 9999864321 1111223334331
Q ss_pred HHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 156 VFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 156 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
+..+.+.+ ..++++|+|+|+||..+..+|.+.- -.++++++.++..
T Consensus 60 --~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~--------~~v~~lil~~~~~ 105 (251)
T TIGR03695 60 --LATLLDQL---GIEPFFLVGYSMGGRIALYYALQYP--------ERVQGLILESGSP 105 (251)
T ss_pred --HHHHHHHc---CCCeEEEEEeccHHHHHHHHHHhCc--------hheeeeEEecCCC
Confidence 33344433 3568999999999998888887642 2588888877653
No 38
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.70 E-value=1.2e-06 Score=84.96 Aligned_cols=132 Identities=16% Similarity=0.199 Sum_probs=86.5
Q ss_pred EeEEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCC
Q 012396 49 SGYVTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETP 128 (464)
Q Consensus 49 sGyl~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqP 128 (464)
+=|+.+.+. ... |.++-...+++++-++.++|=-+.+++++ .|=.+..+.-||-.||+|
T Consensus 67 ~~~v~i~~~--~~i--w~~~~~~~~~~~~plVliHGyGAg~g~f~-----------------~Nf~~La~~~~vyaiDll 125 (365)
T KOG4409|consen 67 KKYVRIPNG--IEI--WTITVSNESANKTPLVLIHGYGAGLGLFF-----------------RNFDDLAKIRNVYAIDLL 125 (365)
T ss_pred eeeeecCCC--cee--EEEeecccccCCCcEEEEeccchhHHHHH-----------------HhhhhhhhcCceEEeccc
Confidence 456666422 222 55544444577778888996333333321 344556668899999999
Q ss_pred CccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeee
Q 012396 129 IGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIA 208 (464)
Q Consensus 129 vGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~ 208 (464)
|-|.|.-.. +.. +.+.+-+.+++-+++|..... -.+.+|.|||+||..+...|.+--+ .++-++
T Consensus 126 -G~G~SSRP~---F~~-d~~~~e~~fvesiE~WR~~~~---L~KmilvGHSfGGYLaa~YAlKyPe--------rV~kLi 189 (365)
T KOG4409|consen 126 -GFGRSSRPK---FSI-DPTTAEKEFVESIEQWRKKMG---LEKMILVGHSFGGYLAAKYALKYPE--------RVEKLI 189 (365)
T ss_pred -CCCCCCCCC---CCC-CcccchHHHHHHHHHHHHHcC---CcceeEeeccchHHHHHHHHHhChH--------hhceEE
Confidence 999997533 211 223334578889999999873 3479999999999977666655433 477889
Q ss_pred cCCCccCcc
Q 012396 209 LGNPVLEFA 217 (464)
Q Consensus 209 IGng~~dp~ 217 (464)
|.+||--|.
T Consensus 190 LvsP~Gf~~ 198 (365)
T KOG4409|consen 190 LVSPWGFPE 198 (365)
T ss_pred Eeccccccc
Confidence 999986554
No 39
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.66 E-value=1.3e-06 Score=84.43 Aligned_cols=136 Identities=22% Similarity=0.211 Sum_probs=86.1
Q ss_pred eeEEeEEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEE
Q 012396 46 QQYSGYVTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFL 125 (464)
Q Consensus 46 ~~ysGyl~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~i 125 (464)
....+|++++ + +++++.|. -+.+.|+++.|+|=|=.+=.+. -....+. .....++.+
T Consensus 21 ~~~hk~~~~~---g--I~~h~~e~--g~~~gP~illlHGfPe~wyswr----------~q~~~la------~~~~rviA~ 77 (322)
T KOG4178|consen 21 AISHKFVTYK---G--IRLHYVEG--GPGDGPIVLLLHGFPESWYSWR----------HQIPGLA------SRGYRVIAP 77 (322)
T ss_pred hcceeeEEEc---c--EEEEEEee--cCCCCCEEEEEccCCccchhhh----------hhhhhhh------hcceEEEec
Confidence 4567888883 1 88888887 5788999999999986443220 0000000 012689999
Q ss_pred eCCCccccCcccCC-CCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccc
Q 012396 126 ETPIGVGFSYSKDA-SSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNL 204 (464)
Q Consensus 126 DqPvGtGfSy~~~~-~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inL 204 (464)
|.+ |-|+|-.... ..| +-...+.|+..+|.. +...++++.|++||+.-+=.+|...-+.-+. .+++
T Consensus 78 Dlr-GyG~Sd~P~~~~~Y---t~~~l~~di~~lld~-------Lg~~k~~lvgHDwGaivaw~la~~~Perv~~--lv~~ 144 (322)
T KOG4178|consen 78 DLR-GYGFSDAPPHISEY---TIDELVGDIVALLDH-------LGLKKAFLVGHDWGAIVAWRLALFYPERVDG--LVTL 144 (322)
T ss_pred CCC-CCCCCCCCCCccee---eHHHHHHHHHHHHHH-------hccceeEEEeccchhHHHHHHHHhChhhcce--EEEe
Confidence 999 9999987554 344 445566676666652 3456899999999988777777665442111 2344
Q ss_pred eeeecCCCccCccc
Q 012396 205 KGIALGNPVLEFAT 218 (464)
Q Consensus 205 kGi~IGng~~dp~~ 218 (464)
++... ||..+|..
T Consensus 145 nv~~~-~p~~~~~~ 157 (322)
T KOG4178|consen 145 NVPFP-NPKLKPLD 157 (322)
T ss_pred cCCCC-Ccccchhh
Confidence 43333 55666544
No 40
>PRK06489 hypothetical protein; Provisional
Probab=98.63 E-value=8.1e-06 Score=82.56 Aligned_cols=60 Identities=13% Similarity=0.176 Sum_probs=46.8
Q ss_pred CccEEEEEcCCCcccCchhH--HHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCC----cccccCC
Q 012396 369 GIPVMVYSGDQDSVIPLTGS--RKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGA----SHEAPFS 442 (464)
Q Consensus 369 ~irVLiy~Gd~D~i~n~~g~--~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gA----GHmvP~D 442 (464)
..+|||.+|+.|.++|.... ++..+.+ .+ -++++|.+| ||++. +
T Consensus 292 ~~PvLvI~G~~D~~~p~~~~~~~~la~~i----------------------------p~-a~l~~i~~a~~~~GH~~~-e 341 (360)
T PRK06489 292 KAPVLAINSADDERNPPETGVMEAALKRV----------------------------KH-GRLVLIPASPETRGHGTT-G 341 (360)
T ss_pred CCCEEEEecCCCcccChhhHHHHHHHHhC----------------------------cC-CeEEEECCCCCCCCcccc-c
Confidence 58999999999999987654 3333311 14 667899996 99985 8
Q ss_pred CcHHHHHHHHHHHcCC
Q 012396 443 QPERSLVLFKAFLDSR 458 (464)
Q Consensus 443 qP~~al~mi~~fl~~~ 458 (464)
+|++..+.|.+|+...
T Consensus 342 ~P~~~~~~i~~FL~~~ 357 (360)
T PRK06489 342 SAKFWKAYLAEFLAQV 357 (360)
T ss_pred CHHHHHHHHHHHHHhc
Confidence 9999999999999643
No 41
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.57 E-value=3.2e-06 Score=84.94 Aligned_cols=61 Identities=25% Similarity=0.395 Sum_probs=50.4
Q ss_pred CccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEc-CCcccccCCCcHHH
Q 012396 369 GIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIR-GASHEAPFSQPERS 447 (464)
Q Consensus 369 ~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~-gAGHmvP~DqP~~a 447 (464)
..+|||..|+.|.+++....+.+.+.+. .+ -.+++|. +|||+++.++|++.
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~---------------------------p~-a~l~~i~~~aGH~~~lE~Pe~~ 328 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG---------------------------PR-GSLRVLRSPYGHDAFLKETDRI 328 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC---------------------------CC-CeEEEEeCCccHHHHhcCHHHH
Confidence 4799999999999999887777666320 13 5568887 49999999999999
Q ss_pred HHHHHHHHcC
Q 012396 448 LVLFKAFLDS 457 (464)
Q Consensus 448 l~mi~~fl~~ 457 (464)
..++..||..
T Consensus 329 ~~~l~~FL~~ 338 (343)
T PRK08775 329 DAILTTALRS 338 (343)
T ss_pred HHHHHHHHHh
Confidence 9999999964
No 42
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.55 E-value=2.7e-06 Score=85.09 Aligned_cols=153 Identities=12% Similarity=0.075 Sum_probs=83.8
Q ss_pred CCceEEEEEEecCCCCCCCCEEEEECCCCCchhhhh-hhhccC----CCcccCCCcc-ccc---CCCc-ccccceEEEeC
Q 012396 58 KQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGV-GAFSEN----GPFRPNGQVL-VRN---EYSW-NREANMLFLET 127 (464)
Q Consensus 58 ~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~-G~f~E~----GP~~~~~~~~-~~n---~~sW-~~~an~l~iDq 127 (464)
.+..++++.++.. ..+.+|+.++|==+-+...+ --..|. +|+.|+.+.- ..+ .... .+-.+|+-+|+
T Consensus 6 ~g~~l~~~~~~~~---~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~ 82 (332)
T TIGR01607 6 DGLLLKTYSWIVK---NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDL 82 (332)
T ss_pred CCCeEEEeeeecc---CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecc
Confidence 3456777766543 23579999997544443110 000011 2222221100 000 0122 24688999999
Q ss_pred CCccccCcccCC-CCccccChHHhHHHHHHHHHHHHHHC----------------CCCC-CCCEEEEeeccccccHHHHH
Q 012396 128 PIGVGFSYSKDA-SSYQGVGDKITARDNLVFLKNWFLKF----------------PQYR-NRSLFITGESYAGHYIPQLA 189 (464)
Q Consensus 128 PvGtGfSy~~~~-~~~~~~~~~~~a~~~~~fL~~f~~~f----------------p~~~-~~~~yi~GESYgG~yvP~~a 189 (464)
| |.|.|.+... ..+. .+-+..++|+..+++...+.. .++. +.|++|+|+|+||..+..++
T Consensus 83 r-GHG~S~~~~~~~g~~-~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~ 160 (332)
T TIGR01607 83 Q-GHGESDGLQNLRGHI-NCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLL 160 (332)
T ss_pred c-ccCCCccccccccch-hhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHH
Confidence 8 9999975422 1111 133456677777777554310 0222 57899999999999887766
Q ss_pred HHHHHhccccccccceeeecCCCccC
Q 012396 190 DLMLEFNKKEELFNLKGIALGNPVLE 215 (464)
Q Consensus 190 ~~i~~~n~~~~~inLkGi~IGng~~d 215 (464)
...-+.........++|+++.+|.+.
T Consensus 161 ~~~~~~~~~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 161 ELLGKSNENNDKLNIKGCISLSGMIS 186 (332)
T ss_pred HHhccccccccccccceEEEeccceE
Confidence 65432110001246899988888764
No 43
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.48 E-value=1.5e-05 Score=94.85 Aligned_cols=108 Identities=15% Similarity=0.120 Sum_probs=69.4
Q ss_pred CCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCC-----CCccccC
Q 012396 72 DPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDA-----SSYQGVG 146 (464)
Q Consensus 72 ~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~-----~~~~~~~ 146 (464)
+..+.|.||+++|.+|++..+ -.+.+ ...+..+++.+|.| |.|.|..... ... ..+
T Consensus 1367 ~~~~~~~vVllHG~~~s~~~w-~~~~~----------------~L~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~-~~s 1427 (1655)
T PLN02980 1367 QNAEGSVVLFLHGFLGTGEDW-IPIMK----------------AISGSARCISIDLP-GHGGSKIQNHAKETQTEP-TLS 1427 (1655)
T ss_pred CCCCCCeEEEECCCCCCHHHH-HHHHH----------------HHhCCCEEEEEcCC-CCCCCCCccccccccccc-cCC
Confidence 345678999999999998876 22110 11234799999999 9999864321 000 112
Q ss_pred hHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCc
Q 012396 147 DKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (464)
Q Consensus 147 ~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~ 213 (464)
-+..|+++.++++ . +...+++|+|+|+||..+-.+|.+.- -.++++++.++.
T Consensus 1428 i~~~a~~l~~ll~----~---l~~~~v~LvGhSmGG~iAl~~A~~~P--------~~V~~lVlis~~ 1479 (1655)
T PLN02980 1428 VELVADLLYKLIE----H---ITPGKVTLVGYSMGARIALYMALRFS--------DKIEGAVIISGS 1479 (1655)
T ss_pred HHHHHHHHHHHHH----H---hCCCCEEEEEECHHHHHHHHHHHhCh--------HhhCEEEEECCC
Confidence 3444555554544 2 23468999999999998877775432 257788777653
No 44
>PRK07581 hypothetical protein; Validated
Probab=98.41 E-value=8.8e-06 Score=81.49 Aligned_cols=60 Identities=18% Similarity=0.164 Sum_probs=50.9
Q ss_pred cCccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcC-CcccccCCCcHH
Q 012396 368 AGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRG-ASHEAPFSQPER 446 (464)
Q Consensus 368 ~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~g-AGHmvP~DqP~~ 446 (464)
-..+||+..|+.|.+++....+.+.+.+ .+ .++++|.+ |||+++.+||+.
T Consensus 274 I~~PtLvI~G~~D~~~p~~~~~~l~~~i----------------------------p~-a~l~~i~~~~GH~~~~~~~~~ 324 (339)
T PRK07581 274 ITAKTFVMPISTDLYFPPEDCEAEAALI----------------------------PN-AELRPIESIWGHLAGFGQNPA 324 (339)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhC----------------------------CC-CeEEEeCCCCCccccccCcHH
Confidence 3589999999999999988877665522 13 56688998 999999999999
Q ss_pred HHHHHHHHHc
Q 012396 447 SLVLFKAFLD 456 (464)
Q Consensus 447 al~mi~~fl~ 456 (464)
...++++|+.
T Consensus 325 ~~~~~~~~~~ 334 (339)
T PRK07581 325 DIAFIDAALK 334 (339)
T ss_pred HHHHHHHHHH
Confidence 9999999985
No 45
>PLN02511 hydrolase
Probab=98.35 E-value=2.3e-05 Score=80.03 Aligned_cols=115 Identities=15% Similarity=0.176 Sum_probs=71.2
Q ss_pred eEEEecCCCCceEEEEEEec--CCCCCCCCEEEEECCCCCchhh-hh-hhhccCCCcccCCCcccccCCCcccccceEEE
Q 012396 50 GYVTVDEKKQRALFYYFAEA--ETDPASKPLVLWLNGGPGCSSL-GV-GAFSENGPFRPNGQVLVRNEYSWNREANMLFL 125 (464)
Q Consensus 50 Gyl~v~~~~~~~lfy~f~es--~~~~~~~Pl~lwlnGGPG~Ss~-~~-G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~i 125 (464)
-++...+ +..+.+.++.. ...+.++|+||.++|..|+|.. ++ .+. ..-..+..+++-+
T Consensus 74 e~l~~~D--G~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~----------------~~~~~~g~~vv~~ 135 (388)
T PLN02511 74 ECLRTPD--GGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHML----------------LRARSKGWRVVVF 135 (388)
T ss_pred EEEECCC--CCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHH----------------HHHHHCCCEEEEE
Confidence 3555532 34455544432 2234678999999999998743 20 110 0111345689999
Q ss_pred eCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHH
Q 012396 126 ETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLAD 190 (464)
Q Consensus 126 DqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~ 190 (464)
|.| |.|-|-......+ ....++|+.++++..-.++| ..+++++|+|.||..+-.++.
T Consensus 136 d~r-G~G~s~~~~~~~~----~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~ 192 (388)
T PLN02511 136 NSR-GCADSPVTTPQFY----SASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLG 192 (388)
T ss_pred ecC-CCCCCCCCCcCEE----cCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHH
Confidence 999 9998865333222 12345577777776666665 468999999999987655543
No 46
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.35 E-value=7.9e-06 Score=88.50 Aligned_cols=113 Identities=19% Similarity=0.279 Sum_probs=72.6
Q ss_pred CCCceEEEEEEecCC-CCC-CCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCC-cccccceEEEeCCCcccc
Q 012396 57 KKQRALFYYFAEAET-DPA-SKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYS-WNREANMLFLETPIGVGF 133 (464)
Q Consensus 57 ~~~~~lfy~f~es~~-~~~-~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~s-W~~~an~l~iDqPvGtGf 133 (464)
..+..+..|+..-.+ ++. ..|+|++++||| +++. | + ....+... +.+-+.||+++-.--+||
T Consensus 373 ~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~~-~------~------~~~~~~q~~~~~G~~V~~~n~RGS~Gy 437 (620)
T COG1506 373 NDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQV-G------Y------SFNPEIQVLASAGYAVLAPNYRGSTGY 437 (620)
T ss_pred CCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--cccc-c------c------ccchhhHHHhcCCeEEEEeCCCCCCcc
Confidence 345678888886543 433 369999999999 4553 3 1 11122222 346788999995544455
Q ss_pred Ccc--cCC-CCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHH
Q 012396 134 SYS--KDA-SSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLA 189 (464)
Q Consensus 134 Sy~--~~~-~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a 189 (464)
+.. ... ..+ -....+|+.+++. |+.+.|..-..++.|+|.||||...-.++
T Consensus 438 G~~F~~~~~~~~----g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~ 491 (620)
T COG1506 438 GREFADAIRGDW----GGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAA 491 (620)
T ss_pred HHHHHHhhhhcc----CCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHH
Confidence 432 111 111 1234668888998 99999988888999999999997554433
No 47
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.31 E-value=1.8e-05 Score=78.75 Aligned_cols=60 Identities=28% Similarity=0.538 Sum_probs=51.0
Q ss_pred CccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCcHHHH
Q 012396 369 GIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSL 448 (464)
Q Consensus 369 ~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~~al 448 (464)
+.+|||..|+.|.++|....+...++ ..| ..++.|.+|||.+..++|++..
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~----------------------------~pn-~~~~~I~~~gH~~h~e~Pe~~~ 314 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKK----------------------------LPN-AELVEIPGAGHLPHLERPEEVA 314 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhh----------------------------CCC-ceEEEeCCCCcccccCCHHHHH
Confidence 37899999999999998855544441 126 8999999999999999999999
Q ss_pred HHHHHHHcC
Q 012396 449 VLFKAFLDS 457 (464)
Q Consensus 449 ~mi~~fl~~ 457 (464)
..+..|+..
T Consensus 315 ~~i~~Fi~~ 323 (326)
T KOG1454|consen 315 ALLRSFIAR 323 (326)
T ss_pred HHHHHHHHH
Confidence 999999974
No 48
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.30 E-value=7.9e-05 Score=75.95 Aligned_cols=64 Identities=28% Similarity=0.337 Sum_probs=52.1
Q ss_pred CccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEc-CCcccccCCCcHHH
Q 012396 369 GIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIR-GASHEAPFSQPERS 447 (464)
Q Consensus 369 ~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~-gAGHmvP~DqP~~a 447 (464)
..+|||..|+.|.++|....+...+.+... ..+ .+++.|. ++||+.+.++|++.
T Consensus 309 ~~PtLvI~G~~D~~~p~~~~~~la~~i~~a------------------------~~~-~~l~~i~~~~GH~~~le~p~~~ 363 (379)
T PRK00175 309 KARFLVVSFTSDWLFPPARSREIVDALLAA------------------------GAD-VSYAEIDSPYGHDAFLLDDPRY 363 (379)
T ss_pred CCCEEEEEECCccccCHHHHHHHHHHHHhc------------------------CCC-eEEEEeCCCCCchhHhcCHHHH
Confidence 579999999999999988887776655310 012 4678885 99999999999999
Q ss_pred HHHHHHHHcC
Q 012396 448 LVLFKAFLDS 457 (464)
Q Consensus 448 l~mi~~fl~~ 457 (464)
.+.+.+|+..
T Consensus 364 ~~~L~~FL~~ 373 (379)
T PRK00175 364 GRLVRAFLER 373 (379)
T ss_pred HHHHHHHHHh
Confidence 9999999975
No 49
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.22 E-value=3.7e-06 Score=83.65 Aligned_cols=131 Identities=21% Similarity=0.318 Sum_probs=80.2
Q ss_pred EEEEEEec--CCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCC
Q 012396 62 LFYYFAEA--ETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDA 139 (464)
Q Consensus 62 lfy~f~es--~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~ 139 (464)
-.||+.++ +.+|++||+||+++|| |.+.+.=|+.+.. -.+-+...+...+|.+|-..-. |- ...
T Consensus 106 ~s~Wlvk~P~~~~pk~DpVlIYlHGG--------GY~l~~~p~qi~~---L~~i~~~l~~~SILvLDYsLt~--~~-~~~ 171 (374)
T PF10340_consen 106 QSYWLVKAPNRFKPKSDPVLIYLHGG--------GYFLGTTPSQIEF---LLNIYKLLPEVSILVLDYSLTS--SD-EHG 171 (374)
T ss_pred ceEEEEeCCcccCCCCCcEEEEEcCC--------eeEecCCHHHHHH---HHHHHHHcCCCeEEEEeccccc--cc-cCC
Confidence 46899985 3468889999999998 4445555665430 0111111123389999955332 00 022
Q ss_pred CCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCcc
Q 012396 140 SSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (464)
Q Consensus 140 ~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp~ 217 (464)
..|++ . ..++++..+...+. -...++.|+|+|-||+.+-.+..++.+.+.. +-=|++++.+||+++.
T Consensus 172 ~~yPt-Q----L~qlv~~Y~~Lv~~---~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~---~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 172 HKYPT-Q----LRQLVATYDYLVES---EGNKNIILMGDSAGGNLALSFLQYLKKPNKL---PYPKSAILISPWVNLV 238 (374)
T ss_pred CcCch-H----HHHHHHHHHHHHhc---cCCCeEEEEecCccHHHHHHHHHHHhhcCCC---CCCceeEEECCCcCCc
Confidence 23432 1 11222223333322 2356899999999999999999998775432 2237899999999986
No 50
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.22 E-value=1.2e-06 Score=81.52 Aligned_cols=57 Identities=21% Similarity=0.381 Sum_probs=47.7
Q ss_pred hcCccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCcHH
Q 012396 367 KAGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPER 446 (464)
Q Consensus 367 ~~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~~ 446 (464)
+..+++|+++|..|.++|....+...+.+ .+ -.++.+.++||....+.|++
T Consensus 173 ~i~~p~l~i~~~~D~~~p~~~~~~~~~~~----------------------------~~-~~~~~~~~~GH~~~~~~~~~ 223 (230)
T PF00561_consen 173 NIKVPTLIIWGEDDPLVPPESSEQLAKLI----------------------------PN-SQLVLIEGSGHFAFLEGPDE 223 (230)
T ss_dssp TTTSEEEEEEETTCSSSHHHHHHHHHHHS----------------------------TT-EEEEEETTCCSTHHHHSHHH
T ss_pred ccCCCeEEEEeCCCCCCCHHHHHHHHHhc----------------------------CC-CEEEECCCCChHHHhcCHHh
Confidence 35689999999999999998888754421 24 67789999999999999999
Q ss_pred HHHHHH
Q 012396 447 SLVLFK 452 (464)
Q Consensus 447 al~mi~ 452 (464)
.-+++.
T Consensus 224 ~~~~i~ 229 (230)
T PF00561_consen 224 FNEIII 229 (230)
T ss_dssp HHHHHH
T ss_pred hhhhhc
Confidence 998875
No 51
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.15 E-value=0.00016 Score=70.18 Aligned_cols=79 Identities=19% Similarity=0.157 Sum_probs=54.4
Q ss_pred ccceEEEeCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccc
Q 012396 119 EANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKK 198 (464)
Q Consensus 119 ~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~ 198 (464)
-.+++-+|.| |.|-|..... +-+...+|+.++++.+.+..|.+ .++.++|+|.||..+-.+|. .
T Consensus 57 G~~v~~~Dl~-G~G~S~~~~~------~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~---~---- 120 (274)
T TIGR03100 57 GFPVLRFDYR-GMGDSEGENL------GFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAP---A---- 120 (274)
T ss_pred CCEEEEeCCC-CCCCCCCCCC------CHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhh---h----
Confidence 3789999999 9998864321 22345567777777666666654 36999999999975544432 1
Q ss_pred cccccceeeecCCCccC
Q 012396 199 EELFNLKGIALGNPVLE 215 (464)
Q Consensus 199 ~~~inLkGi~IGng~~d 215 (464)
.-.++|+++.||++.
T Consensus 121 --~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 121 --DLRVAGLVLLNPWVR 135 (274)
T ss_pred --CCCccEEEEECCccC
Confidence 126899999999854
No 52
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.08 E-value=9.1e-05 Score=72.81 Aligned_cols=133 Identities=19% Similarity=0.154 Sum_probs=86.7
Q ss_pred EeEEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcc-cccceEEEeC
Q 012396 49 SGYVTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWN-REANMLFLET 127 (464)
Q Consensus 49 sGyl~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~-~~an~l~iDq 127 (464)
.|+... ..+..++|+-+++.+++. .+|++++|.=.++.-. --+. +-++ .-..|+=+|+
T Consensus 11 ~~~~~~--~d~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~ry-~~la----------------~~l~~~G~~V~~~D~ 69 (298)
T COG2267 11 EGYFTG--ADGTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGRY-EELA----------------DDLAARGFDVYALDL 69 (298)
T ss_pred cceeec--CCCceEEEEeecCCCCCC--cEEEEecCchHHHHHH-HHHH----------------HHHHhCCCEEEEecC
Confidence 455554 345789999988765544 8999999988777664 1110 1111 4567888999
Q ss_pred CCccccCc-ccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhcccccccccee
Q 012396 128 PIGVGFSY-SKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKG 206 (464)
Q Consensus 128 PvGtGfSy-~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkG 206 (464)
| |.|.|. ... .... +=+....|+-++++...... ...|++|+|+|.||-.+...+.... -+++|
T Consensus 70 R-GhG~S~r~~r--g~~~-~f~~~~~dl~~~~~~~~~~~---~~~p~~l~gHSmGg~Ia~~~~~~~~--------~~i~~ 134 (298)
T COG2267 70 R-GHGRSPRGQR--GHVD-SFADYVDDLDAFVETIAEPD---PGLPVFLLGHSMGGLIALLYLARYP--------PRIDG 134 (298)
T ss_pred C-CCCCCCCCCc--CCch-hHHHHHHHHHHHHHHHhccC---CCCCeEEEEeCcHHHHHHHHHHhCC--------ccccE
Confidence 9 999997 322 1111 11223334444444444333 4578999999999987766665442 37999
Q ss_pred eecCCCccCcc
Q 012396 207 IALGNPVLEFA 217 (464)
Q Consensus 207 i~IGng~~dp~ 217 (464)
+++-+|++...
T Consensus 135 ~vLssP~~~l~ 145 (298)
T COG2267 135 LVLSSPALGLG 145 (298)
T ss_pred EEEECccccCC
Confidence 99999998774
No 53
>PRK05855 short chain dehydrogenase; Validated
Probab=98.03 E-value=0.00014 Score=77.97 Aligned_cols=99 Identities=13% Similarity=0.115 Sum_probs=64.4
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccC
Q 012396 59 QRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKD 138 (464)
Q Consensus 59 ~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~ 138 (464)
+..+.|+-+. +.+.|.||.++|.++.+..+ .-+.+ -+.+..+|+-+|.| |.|.|....
T Consensus 12 g~~l~~~~~g----~~~~~~ivllHG~~~~~~~w-~~~~~----------------~L~~~~~Vi~~D~~-G~G~S~~~~ 69 (582)
T PRK05855 12 GVRLAVYEWG----DPDRPTVVLVHGYPDNHEVW-DGVAP----------------LLADRFRVVAYDVR-GAGRSSAPK 69 (582)
T ss_pred CEEEEEEEcC----CCCCCeEEEEcCCCchHHHH-HHHHH----------------HhhcceEEEEecCC-CCCCCCCCC
Confidence 4567776542 23478999999999877665 22211 12345789999999 999997533
Q ss_pred C-CCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHH
Q 012396 139 A-SSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQL 188 (464)
Q Consensus 139 ~-~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~ 188 (464)
. ..+ +-+..++|+..+++..- ...+++|+|+|+||..+-.+
T Consensus 70 ~~~~~---~~~~~a~dl~~~i~~l~------~~~~~~lvGhS~Gg~~a~~~ 111 (582)
T PRK05855 70 RTAAY---TLARLADDFAAVIDAVS------PDRPVHLLAHDWGSIQGWEA 111 (582)
T ss_pred ccccc---CHHHHHHHHHHHHHHhC------CCCcEEEEecChHHHHHHHH
Confidence 2 122 44566777777776421 13469999999999544333
No 54
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.02 E-value=0.0014 Score=66.06 Aligned_cols=63 Identities=24% Similarity=0.357 Sum_probs=50.5
Q ss_pred CccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEc-CCcccccCCCcHHH
Q 012396 369 GIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIR-GASHEAPFSQPERS 447 (464)
Q Consensus 369 ~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~-gAGHmvP~DqP~~a 447 (464)
..+||++.|+.|.++|....+...+.+... . -. .+|+.|. +|||+++.++|++.
T Consensus 288 ~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~-~-----------------------~~-v~~~~i~~~~GH~~~le~p~~~ 342 (351)
T TIGR01392 288 KAPFLVVSITSDWLFPPAESRELAKALPAA-G-----------------------LR-VTYVEIESPYGHDAFLVETDQV 342 (351)
T ss_pred CCCEEEEEeCCccccCHHHHHHHHHHHhhc-C-----------------------Cc-eEEEEeCCCCCcchhhcCHHHH
Confidence 589999999999999998888777755310 0 01 4566674 89999999999999
Q ss_pred HHHHHHHHc
Q 012396 448 LVLFKAFLD 456 (464)
Q Consensus 448 l~mi~~fl~ 456 (464)
.+.|.+|++
T Consensus 343 ~~~l~~FL~ 351 (351)
T TIGR01392 343 EELIRGFLR 351 (351)
T ss_pred HHHHHHHhC
Confidence 999999984
No 55
>PRK10985 putative hydrolase; Provisional
Probab=97.97 E-value=0.00036 Score=69.49 Aligned_cols=132 Identities=15% Similarity=0.161 Sum_probs=68.6
Q ss_pred EEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCCchhhhh--hhhccCCCcccCCCcccccCCCcccccceEEEeCCC
Q 012396 52 VTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGV--GAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPI 129 (464)
Q Consensus 52 l~v~~~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~--G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPv 129 (464)
+...+ +..+.+++.+....+.++|+||.++|.+|++...+ .+. ..+ .. +-.+++-+|.+
T Consensus 36 ~~~~d--g~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~----------~~l--~~----~G~~v~~~d~r- 96 (324)
T PRK10985 36 LELPD--GDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLL----------EAA--QK----RGWLGVVMHFR- 96 (324)
T ss_pred EECCC--CCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHH----------HHH--HH----CCCEEEEEeCC-
Confidence 45533 34444444433334457899999999999754310 010 001 11 23468888987
Q ss_pred ccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeec
Q 012396 130 GVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIAL 209 (464)
Q Consensus 130 GtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~I 209 (464)
|.|-|-......+.. . ..+|+..+++...++++ ..+++++|+|+||..+-..+.+-.+ ...++++++
T Consensus 97 G~g~~~~~~~~~~~~-~---~~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~~~~~~------~~~~~~~v~ 163 (324)
T PRK10985 97 GCSGEPNRLHRIYHS-G---ETEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLLAKEGD------DLPLDAAVI 163 (324)
T ss_pred CCCCCccCCcceECC-C---chHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHHHhhCC------CCCccEEEE
Confidence 877553322222211 1 13344444433333454 4579999999999865444433211 123666555
Q ss_pred CCCccC
Q 012396 210 GNPVLE 215 (464)
Q Consensus 210 Gng~~d 215 (464)
.++-.+
T Consensus 164 i~~p~~ 169 (324)
T PRK10985 164 VSAPLM 169 (324)
T ss_pred EcCCCC
Confidence 554434
No 56
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=97.80 E-value=0.0004 Score=64.51 Aligned_cols=92 Identities=13% Similarity=0.080 Sum_probs=59.7
Q ss_pred cccceEEEeCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhcc
Q 012396 118 REANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNK 197 (464)
Q Consensus 118 ~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~ 197 (464)
+-..|+.+|.+-+.||+..-....... ......+|+.++++...++. ......+.|+|.||||+.+-.++.+-
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~-~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~~----- 85 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGD-WGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQH----- 85 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTG-TTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHHT-----
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhcc-ccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhccc-----
Confidence 567899999997777776422211111 22345667777776665554 55567899999999999887776521
Q ss_pred ccccccceeeecCCCccCcccc
Q 012396 198 KEELFNLKGIALGNPVLEFATD 219 (464)
Q Consensus 198 ~~~~inLkGi~IGng~~dp~~~ 219 (464)
+-..+.++.++|.+|+...
T Consensus 86 ---~~~f~a~v~~~g~~d~~~~ 104 (213)
T PF00326_consen 86 ---PDRFKAAVAGAGVSDLFSY 104 (213)
T ss_dssp ---CCGSSEEEEESE-SSTTCS
T ss_pred ---ceeeeeeeccceecchhcc
Confidence 2247889999999887543
No 57
>PLN02872 triacylglycerol lipase
Probab=97.77 E-value=0.00073 Score=69.03 Aligned_cols=61 Identities=16% Similarity=0.193 Sum_probs=48.0
Q ss_pred CccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCccc---ccCCCcH
Q 012396 369 GIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHE---APFSQPE 445 (464)
Q Consensus 369 ~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHm---vP~DqP~ 445 (464)
.++|+|+.|..|.+++....+++++.+. +.-....+.++||+ ...+.|+
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp----------------------------~~~~l~~l~~~gH~dfi~~~eape 376 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELP----------------------------SKPELLYLENYGHIDFLLSTSAKE 376 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCC----------------------------CccEEEEcCCCCCHHHHhCcchHH
Confidence 5799999999999999988888887431 10234567899996 4558999
Q ss_pred HHHHHHHHHHcC
Q 012396 446 RSLVLFKAFLDS 457 (464)
Q Consensus 446 ~al~mi~~fl~~ 457 (464)
.+++-+-+|+..
T Consensus 377 ~V~~~Il~fL~~ 388 (395)
T PLN02872 377 DVYNHMIQFFRS 388 (395)
T ss_pred HHHHHHHHHHHH
Confidence 999999999964
No 58
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.59 E-value=0.0002 Score=69.53 Aligned_cols=106 Identities=13% Similarity=0.122 Sum_probs=66.6
Q ss_pred CCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHhHHH
Q 012396 74 ASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARD 153 (464)
Q Consensus 74 ~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~ 153 (464)
.++|.||+++|..+.++.+ ..+.+ .+.. +..+++-+|.| |.|.|.......+ +-+..+++
T Consensus 16 ~~~p~vvliHG~~~~~~~w-~~~~~---------~L~~------~g~~vi~~dl~-g~G~s~~~~~~~~---~~~~~~~~ 75 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCW-YKIRC---------LMEN------SGYKVTCIDLK-SAGIDQSDADSVT---TFDEYNKP 75 (273)
T ss_pred CCCCeEEEECCCCCCcCcH-HHHHH---------HHHh------CCCEEEEeccc-CCCCCCCCcccCC---CHHHHHHH
Confidence 5689999999988877765 22100 0111 24689999999 9998754322111 33344444
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCc
Q 012396 154 NLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (464)
Q Consensus 154 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~ 213 (464)
+.++ ++.... ..+++|+|+||||..+..++.+.-+ .++++++.++.
T Consensus 76 l~~~----i~~l~~--~~~v~lvGhS~GG~v~~~~a~~~p~--------~v~~lv~~~~~ 121 (273)
T PLN02211 76 LIDF----LSSLPE--NEKVILVGHSAGGLSVTQAIHRFPK--------KICLAVYVAAT 121 (273)
T ss_pred HHHH----HHhcCC--CCCEEEEEECchHHHHHHHHHhChh--------heeEEEEeccc
Confidence 4444 444322 3689999999999977777654322 47788877654
No 59
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.59 E-value=0.0029 Score=60.79 Aligned_cols=130 Identities=18% Similarity=0.131 Sum_probs=81.3
Q ss_pred CCCceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcc
Q 012396 57 KKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYS 136 (464)
Q Consensus 57 ~~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~ 136 (464)
..+..+|.-++....+++-+-+|+..+|.-+-||-.+--+ =. .+..+ -.=+.-+|++ |.|.|-+
T Consensus 35 ~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~---a~------~l~~~------g~~v~a~D~~-GhG~SdG 98 (313)
T KOG1455|consen 35 PRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQST---AK------RLAKS------GFAVYAIDYE-GHGRSDG 98 (313)
T ss_pred CCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHH---HH------HHHhC------CCeEEEeecc-CCCcCCC
Confidence 3466788766655444577889999998776664321100 00 11111 1236679999 9999986
Q ss_pred cCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 137 KDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 137 ~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
-. .|.. +-+..++|...|+..+.. ..+++..|.|++|||+||.-+-.++.+ + +--..|+++..|+.
T Consensus 99 l~--~yi~-~~d~~v~D~~~~~~~i~~-~~e~~~lp~FL~GeSMGGAV~Ll~~~k--~------p~~w~G~ilvaPmc 164 (313)
T KOG1455|consen 99 LH--AYVP-SFDLVVDDVISFFDSIKE-REENKGLPRFLFGESMGGAVALLIALK--D------PNFWDGAILVAPMC 164 (313)
T ss_pred Cc--ccCC-cHHHHHHHHHHHHHHHhh-ccccCCCCeeeeecCcchHHHHHHHhh--C------Ccccccceeeeccc
Confidence 43 3433 444566677666665444 457888999999999999766555443 1 22467777776653
No 60
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.51 E-value=0.00041 Score=64.59 Aligned_cols=112 Identities=14% Similarity=0.083 Sum_probs=61.7
Q ss_pred CCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcc-----cccceEEEeCCCccccCcccCCCCccc---
Q 012396 73 PASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWN-----REANMLFLETPIGVGFSYSKDASSYQG--- 144 (464)
Q Consensus 73 ~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~-----~~an~l~iDqPvGtGfSy~~~~~~~~~--- 144 (464)
.+..|+||+|+|+++.++.. .. .+.|. .-..||..|.| |.|.+...- +.+..
T Consensus 10 ~~~~P~vv~lHG~~~~~~~~-~~-----------------~~~~~~~a~~~g~~Vv~Pd~~-g~~~~~~~~-~~~~~~~~ 69 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASAY-VI-----------------DWGWKAAADRYGFVLVAPEQT-SYNSSNNCW-DWFFTHHR 69 (212)
T ss_pred CCCCCEEEEeCCCCCCHHHH-hh-----------------hcChHHHHHhCCeEEEecCCc-CccccCCCC-CCCCcccc
Confidence 35689999999999876653 10 01122 23578888877 554332100 00000
Q ss_pred cChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCc
Q 012396 145 VGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (464)
Q Consensus 145 ~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~ 213 (464)
........++.++++...++++ ....+++|+|+|.||..+-.+|..- +-.+.++++..|.
T Consensus 70 ~~~~~~~~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a~~~--------p~~~~~~~~~~g~ 129 (212)
T TIGR01840 70 ARGTGEVESLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLGCTY--------PDVFAGGASNAGL 129 (212)
T ss_pred CCCCccHHHHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHHHhC--------chhheEEEeecCC
Confidence 0001123344445554444543 3456899999999998766655431 1246777766655
No 61
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.44 E-value=0.00078 Score=65.01 Aligned_cols=132 Identities=11% Similarity=0.089 Sum_probs=78.5
Q ss_pred CCceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcc-cccceEEEeCCCccccCcc
Q 012396 58 KQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWN-REANMLFLETPIGVGFSYS 136 (464)
Q Consensus 58 ~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~-~~an~l~iDqPvGtGfSy~ 136 (464)
...++|.|+++.... ..+|+||.++|-.+-..-..-.+. .--..+. .-.+++-+|.| |.|.|-.
T Consensus 8 ~~g~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~~~-------------~la~~La~~Gy~Vl~~Dl~-G~G~S~g 72 (266)
T TIGR03101 8 PHGFRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRMVA-------------LQARAFAAGGFGVLQIDLY-GCGDSAG 72 (266)
T ss_pred CCCcEEEEEecCCCC-CCceEEEEECCCcccccchhHHHH-------------HHHHHHHHCCCEEEEECCC-CCCCCCC
Confidence 345688888876432 337999999985431110000000 0001222 35789999999 9999865
Q ss_pred cCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 137 KDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 137 ~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
... .. +-+..++|+..++ +|++... ..+++|+|+|+||..+..+|.+. +-.++++++-+|.++.
T Consensus 73 ~~~-~~---~~~~~~~Dv~~ai-~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~--------p~~v~~lVL~~P~~~g 136 (266)
T TIGR03101 73 DFA-AA---RWDVWKEDVAAAY-RWLIEQG---HPPVTLWGLRLGALLALDAANPL--------AAKCNRLVLWQPVVSG 136 (266)
T ss_pred ccc-cC---CHHHHHHHHHHHH-HHHHhcC---CCCEEEEEECHHHHHHHHHHHhC--------ccccceEEEeccccch
Confidence 322 11 2233445554443 3444432 35899999999999888776443 2257889999988776
Q ss_pred cccc
Q 012396 217 ATDF 220 (464)
Q Consensus 217 ~~~~ 220 (464)
....
T Consensus 137 ~~~l 140 (266)
T TIGR03101 137 KQQL 140 (266)
T ss_pred HHHH
Confidence 4433
No 62
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.42 E-value=0.00077 Score=69.47 Aligned_cols=120 Identities=23% Similarity=0.230 Sum_probs=72.4
Q ss_pred eEEEEEEecCCCCCCCCEEEEECCCCCchh--hhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccC
Q 012396 61 ALFYYFAEAETDPASKPLVLWLNGGPGCSS--LGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKD 138 (464)
Q Consensus 61 ~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss--~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~ 138 (464)
.+--|++.... .+..|+|| +.||.++.. .+ ..+ -++--.+-.+||-+|.| |+|.|....
T Consensus 180 ~l~g~l~~P~~-~~~~P~Vl-i~gG~~~~~~~~~-~~~---------------~~~La~~Gy~vl~~D~p-G~G~s~~~~ 240 (414)
T PRK05077 180 PITGFLHLPKG-DGPFPTVL-VCGGLDSLQTDYY-RLF---------------RDYLAPRGIAMLTIDMP-SVGFSSKWK 240 (414)
T ss_pred EEEEEEEECCC-CCCccEEE-EeCCcccchhhhH-HHH---------------HHHHHhCCCEEEEECCC-CCCCCCCCC
Confidence 45545543322 34578887 457776532 22 111 00111234789999999 999985421
Q ss_pred CCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccC
Q 012396 139 ASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (464)
Q Consensus 139 ~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~d 215 (464)
. . .+ .......+..++...|.....++.|+|.|+||.+++.+|..- +-.++++++.+|.++
T Consensus 241 ~---~--~d---~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~--------p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 241 L---T--QD---SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLE--------PPRLKAVACLGPVVH 301 (414)
T ss_pred c---c--cc---HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhC--------CcCceEEEEECCccc
Confidence 1 0 11 112223445566667766667899999999999998887542 125888888887754
No 63
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.38 E-value=0.0029 Score=60.53 Aligned_cols=146 Identities=16% Similarity=0.139 Sum_probs=83.6
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccc-----eEEEeC------
Q 012396 59 QRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREAN-----MLFLET------ 127 (464)
Q Consensus 59 ~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an-----~l~iDq------ 127 (464)
+...-||++.-...++.+||+|.|+|+=|..+-. .+-..|++.|. |+|-|+
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~------------------~~~sg~d~lAd~~gFlV~yPdg~~~~wn 105 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQ------------------LHGTGWDALADREGFLVAYPDGYDRAWN 105 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHHh------------------hcccchhhhhcccCcEEECcCccccccC
Confidence 4567789887666778889999999988876653 33445555443 445431
Q ss_pred CCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceee
Q 012396 128 PIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGI 207 (464)
Q Consensus 128 PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi 207 (464)
|-+.|-++...... .+...+..+.+.+.....+| ......+||+|-|-||..+-.++-.- ++ -+.++
T Consensus 106 ~~~~~~~~~p~~~~----~g~ddVgflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~~---p~-----~faa~ 172 (312)
T COG3509 106 ANGCGNWFGPADRR----RGVDDVGFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACEY---PD-----IFAAI 172 (312)
T ss_pred CCcccccCCccccc----CCccHHHHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhcC---cc-----cccce
Confidence 44555554322110 12222334444444444555 34566899999999998766655432 21 36677
Q ss_pred ecCCCcc-Ccc-cccchhHHHhhhccCCCh
Q 012396 208 ALGNPVL-EFA-TDFNSRAEFFWSHGLISD 235 (464)
Q Consensus 208 ~IGng~~-dp~-~~~~~~~~~~~~~gli~~ 235 (464)
++..|.. +.. .....-.+.+..||..|+
T Consensus 173 A~VAg~~~~~~a~~~~rp~~~m~~~G~~Dp 202 (312)
T COG3509 173 APVAGLLALGVACTPPRPVSVMAFHGTADP 202 (312)
T ss_pred eeeecccCCCcccCCCCchhHHHhcCCCCC
Confidence 7777766 332 222222344445565554
No 64
>PRK11071 esterase YqiA; Provisional
Probab=97.08 E-value=0.0092 Score=54.60 Aligned_cols=55 Identities=15% Similarity=0.106 Sum_probs=44.2
Q ss_pred cCccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCcHHH
Q 012396 368 AGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERS 447 (464)
Q Consensus 368 ~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~~a 447 (464)
...+|+|.+|+.|-++|+....+..++ .....+.||+|.- ...+..
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~--------------------------------~~~~~~~ggdH~f--~~~~~~ 180 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAA--------------------------------CRQTVEEGGNHAF--VGFERY 180 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHh--------------------------------cceEEECCCCcch--hhHHHh
Confidence 346899999999999999999877761 2235779999998 344889
Q ss_pred HHHHHHHHc
Q 012396 448 LVLFKAFLD 456 (464)
Q Consensus 448 l~mi~~fl~ 456 (464)
++.+..|++
T Consensus 181 ~~~i~~fl~ 189 (190)
T PRK11071 181 FNQIVDFLG 189 (190)
T ss_pred HHHHHHHhc
Confidence 999999974
No 65
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.05 E-value=0.018 Score=56.46 Aligned_cols=68 Identities=22% Similarity=0.465 Sum_probs=52.4
Q ss_pred CccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEe-CCeeEEEEEcCCccccc--CCCcH
Q 012396 369 GIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVY-GNILSFATIRGASHEAP--FSQPE 445 (464)
Q Consensus 369 ~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~-~n~Ltfv~V~gAGHmvP--~DqP~ 445 (464)
..+|+||+|..|-++|+..++..++++-. .. .+ ++|.++.+++|+.. ...|
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~------------------------~G~a~-V~~~~~~~~~H~~~~~~~~~- 272 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCA------------------------AGGAD-VEYVRYPGGGHLGAAFASAP- 272 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHH------------------------cCCCC-EEEEecCCCChhhhhhcCcH-
Confidence 47999999999999999999999996531 11 15 99999999999965 4566
Q ss_pred HHHHHHHHHHcCCCCCC
Q 012396 446 RSLVLFKAFLDSRPLPE 462 (464)
Q Consensus 446 ~al~mi~~fl~~~~l~~ 462 (464)
.++.-++.-+.|++.++
T Consensus 273 ~a~~Wl~~rf~G~~~~~ 289 (290)
T PF03583_consen 273 DALAWLDDRFAGKPATS 289 (290)
T ss_pred HHHHHHHHHHCCCCCCC
Confidence 45566666667887765
No 66
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.03 E-value=0.005 Score=59.79 Aligned_cols=50 Identities=24% Similarity=0.210 Sum_probs=33.9
Q ss_pred HHHHHHH-CCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 158 LKNWFLK-FPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 158 L~~f~~~-fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
|..+.+. ++ ....+++|+|+|+||..+-.+|.+- +-.+++++..+|+.++
T Consensus 125 l~~~~~~~~~-~~~~~~~~~G~S~GG~~a~~~a~~~--------p~~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 125 LPALVAAQFP-LDGERQGITGHSMGGHGALVIALKN--------PDRFKSVSAFAPIVAP 175 (275)
T ss_pred HHHHHHhhCC-CCCCceEEEEEChhHHHHHHHHHhC--------cccceEEEEECCccCc
Confidence 3334443 43 4456899999999998776666542 1246788888888765
No 67
>PRK10566 esterase; Provisional
Probab=96.93 E-value=0.0046 Score=58.64 Aligned_cols=111 Identities=12% Similarity=0.054 Sum_probs=64.6
Q ss_pred EEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCccc-ccceEEEeCCCccccCcccCCC
Q 012396 62 LFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNR-EANMLFLETPIGVGFSYSKDAS 140 (464)
Q Consensus 62 lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~-~an~l~iDqPvGtGfSy~~~~~ 140 (464)
.+|.++++....+..|+||+++|++|..... ..+ ...+.+ -.+++.+|.| |.|-|+.....
T Consensus 13 ~~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~-~~~----------------~~~l~~~G~~v~~~d~~-g~G~~~~~~~~ 74 (249)
T PRK10566 13 EVLHAFPAGQRDTPLPTVFFYHGFTSSKLVY-SYF----------------AVALAQAGFRVIMPDAP-MHGARFSGDEA 74 (249)
T ss_pred ceEEEcCCCCCCCCCCEEEEeCCCCcccchH-HHH----------------HHHHHhCCCEEEEecCC-cccccCCCccc
Confidence 4555565533334579999999998876543 211 112222 3689999988 88876542211
Q ss_pred C-ccc-cCh-HHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHH
Q 012396 141 S-YQG-VGD-KITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADL 191 (464)
Q Consensus 141 ~-~~~-~~~-~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~ 191 (464)
. ... ..+ ....+++..++ .++...+.....++.|+|+|+||..+..++.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 75 RRLNHFWQILLQNMQEFPTLR-AAIREEGWLLDDRLAVGGASMGGMTALGIMAR 127 (249)
T ss_pred cchhhHHHHHHHHHHHHHHHH-HHHHhcCCcCccceeEEeecccHHHHHHHHHh
Confidence 0 000 000 12234443333 44444444556789999999999988766543
No 68
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.80 E-value=0.01 Score=59.03 Aligned_cols=147 Identities=17% Similarity=0.205 Sum_probs=91.7
Q ss_pred eEEeEEEecCCCCceEEEEEEecCC-CC-CCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcc-cccceE
Q 012396 47 QYSGYVTVDEKKQRALFYYFAEAET-DP-ASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWN-REANML 123 (464)
Q Consensus 47 ~ysGyl~v~~~~~~~lfy~f~es~~-~~-~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~-~~an~l 123 (464)
.++.-+.. .....++-+.|.... .+ ..+|++||++||--|-+.. -. | ...+--++. +.+|.+
T Consensus 61 v~~~dv~~--~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~-~~-----~-------~y~~~~~~~a~~~~~v 125 (336)
T KOG1515|consen 61 VTSKDVTI--DPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSA-NS-----P-------AYDSFCTRLAAELNCV 125 (336)
T ss_pred ceeeeeEe--cCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCC-CC-----c-------hhHHHHHHHHHHcCeE
Confidence 33444444 455779999887654 33 6899999999999887752 00 0 111112232 455555
Q ss_pred EEeCCCccccCcccCCCCccccChHHhHHHHHHHHHH-HHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccc
Q 012396 124 FLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKN-WFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELF 202 (464)
Q Consensus 124 ~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~-f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~i 202 (464)
-| .++|--+... .++. .-++.-..+..++++ |.+..-+.+ .++|+|.|-||-.+-.+|.++.+.. ...+
T Consensus 126 vv----SVdYRLAPEh-~~Pa-~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~--~~~~ 195 (336)
T KOG1515|consen 126 VV----SVDYRLAPEH-PFPA-AYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK--LSKP 195 (336)
T ss_pred EE----ecCcccCCCC-CCCc-cchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc--CCCc
Confidence 43 4566665433 2322 111222223334444 777665554 3999999999999999999998743 2367
Q ss_pred cceeeecCCCccCccc
Q 012396 203 NLKGIALGNPVLEFAT 218 (464)
Q Consensus 203 nLkGi~IGng~~dp~~ 218 (464)
.|+|+++.-|++....
T Consensus 196 ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 196 KIKGQILIYPFFQGTD 211 (336)
T ss_pred ceEEEEEEecccCCCC
Confidence 8999999999876543
No 69
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.68 E-value=0.05 Score=53.07 Aligned_cols=60 Identities=20% Similarity=0.299 Sum_probs=46.6
Q ss_pred cCccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCcHHH
Q 012396 368 AGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERS 447 (464)
Q Consensus 368 ~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~~a 447 (464)
..-+||+..|-.+--++..-..+.... +.+ ..+..+++|||+|..|+|+..
T Consensus 252 ~~~pvlfi~g~~S~fv~~~~~~~~~~~----------------------------fp~-~e~~~ld~aGHwVh~E~P~~~ 302 (315)
T KOG2382|consen 252 YTGPVLFIKGLQSKFVPDEHYPRMEKI----------------------------FPN-VEVHELDEAGHWVHLEKPEEF 302 (315)
T ss_pred cccceeEEecCCCCCcChhHHHHHHHh----------------------------ccc-hheeecccCCceeecCCHHHH
Confidence 356999999999988776655544431 113 455778889999999999999
Q ss_pred HHHHHHHHc
Q 012396 448 LVLFKAFLD 456 (464)
Q Consensus 448 l~mi~~fl~ 456 (464)
..+|..|+.
T Consensus 303 ~~~i~~Fl~ 311 (315)
T KOG2382|consen 303 IESISEFLE 311 (315)
T ss_pred HHHHHHHhc
Confidence 999999985
No 70
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=96.67 E-value=0.1 Score=52.49 Aligned_cols=62 Identities=11% Similarity=0.228 Sum_probs=45.9
Q ss_pred cCccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCc---
Q 012396 368 AGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQP--- 444 (464)
Q Consensus 368 ~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP--- 444 (464)
-..+|++++|+.|.+++....+.+.+.+. . .+ .++..+ .+||+.+.+.|
T Consensus 285 i~~Pvliv~G~~D~i~~~~~~~~~~~~~~----~----------------------~~-~~~~~~-~~gH~~~~~~~~~~ 336 (350)
T TIGR01836 285 IKMPILNIYAERDHLVPPDASKALNDLVS----S----------------------ED-YTELSF-PGGHIGIYVSGKAQ 336 (350)
T ss_pred CCCCeEEEecCCCCcCCHHHHHHHHHHcC----C----------------------CC-eEEEEc-CCCCEEEEECchhH
Confidence 35899999999999999998887777431 0 12 445544 48999998866
Q ss_pred HHHHHHHHHHHcC
Q 012396 445 ERSLVLFKAFLDS 457 (464)
Q Consensus 445 ~~al~mi~~fl~~ 457 (464)
+++..-+.+|+..
T Consensus 337 ~~v~~~i~~wl~~ 349 (350)
T TIGR01836 337 KEVPPAIGKWLQA 349 (350)
T ss_pred hhhhHHHHHHHHh
Confidence 6677777778753
No 71
>PRK13604 luxD acyl transferase; Provisional
Probab=96.66 E-value=0.086 Score=51.69 Aligned_cols=125 Identities=11% Similarity=0.084 Sum_probs=71.7
Q ss_pred CCceEEEEEEecC-CCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcc
Q 012396 58 KQRALFYYFAEAE-TDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYS 136 (464)
Q Consensus 58 ~~~~lfy~f~es~-~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~ 136 (464)
.+..|.=|+.+.+ +++...|++|..+ |.|+....+ ...-.+=+.+-.++|-.|.--|.|-|-+
T Consensus 18 dG~~L~Gwl~~P~~~~~~~~~~vIi~H-Gf~~~~~~~---------------~~~A~~La~~G~~vLrfD~rg~~GeS~G 81 (307)
T PRK13604 18 NGQSIRVWETLPKENSPKKNNTILIAS-GFARRMDHF---------------AGLAEYLSSNGFHVIRYDSLHHVGLSSG 81 (307)
T ss_pred CCCEEEEEEEcCcccCCCCCCEEEEeC-CCCCChHHH---------------HHHHHHHHHCCCEEEEecCCCCCCCCCC
Confidence 4566777777664 3456678888876 566553211 1112234456789999997645688854
Q ss_pred cCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 137 KDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 137 ~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
+-. .... +. ...|+..+ -.|++.. ...++.|.|+|.||.-+...|. ..+++++++..|+.+-
T Consensus 82 ~~~-~~t~-s~--g~~Dl~aa-id~lk~~---~~~~I~LiG~SmGgava~~~A~----------~~~v~~lI~~sp~~~l 143 (307)
T PRK13604 82 TID-EFTM-SI--GKNSLLTV-VDWLNTR---GINNLGLIAASLSARIAYEVIN----------EIDLSFLITAVGVVNL 143 (307)
T ss_pred ccc-cCcc-cc--cHHHHHHH-HHHHHhc---CCCceEEEEECHHHHHHHHHhc----------CCCCCEEEEcCCcccH
Confidence 321 1111 11 23344322 2333333 1347999999999987433332 1258889988888653
No 72
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.64 E-value=0.0029 Score=61.47 Aligned_cols=112 Identities=15% Similarity=0.184 Sum_probs=66.2
Q ss_pred CCCCEEEEECCCCCch-hhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHhHH
Q 012396 74 ASKPLVLWLNGGPGCS-SLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITAR 152 (464)
Q Consensus 74 ~~~Pl~lwlnGGPG~S-s~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~ 152 (464)
.+.|++|+++|-.|.. ..+.-. + .+.+.-....||+.+|-+.+..-.|... ..+-...++
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~-------------l-~~~ll~~~~~nVi~vD~~~~~~~~y~~a-----~~~~~~v~~ 94 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISD-------------L-RKAYLSRGDYNVIVVDWGRGANPNYPQA-----VNNTRVVGA 94 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHH-------------H-HHHHHhcCCCEEEEEECccccccChHHH-----HHhHHHHHH
Confidence 4579999999977754 222000 0 1111112458999999884311112110 012234556
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCc
Q 012396 153 DNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (464)
Q Consensus 153 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~ 213 (464)
++..+|+...+.. .....+++|+|+|+||+.+-.+|.++-+ +++.|+..+|.
T Consensus 95 ~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~--------~v~~iv~LDPa 146 (275)
T cd00707 95 ELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG--------KLGRITGLDPA 146 (275)
T ss_pred HHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC--------ccceeEEecCC
Confidence 6666666655543 2334689999999999998888876522 57777776654
No 73
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.61 E-value=0.0082 Score=55.42 Aligned_cols=104 Identities=21% Similarity=0.183 Sum_probs=63.3
Q ss_pred CCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHhHHHHH
Q 012396 76 KPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNL 155 (464)
Q Consensus 76 ~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~ 155 (464)
.|.+++++|+|+++..+ ....+. +...... .+++.+|+| |.|.|. .. .. .....+
T Consensus 21 ~~~i~~~hg~~~~~~~~-~~~~~~---------~~~~~~~----~~~~~~d~~-g~g~s~-~~--~~---~~~~~~---- 75 (282)
T COG0596 21 GPPLVLLHGFPGSSSVW-RPVFKV---------LPALAAR----YRVIAPDLR-GHGRSD-PA--GY---SLSAYA---- 75 (282)
T ss_pred CCeEEEeCCCCCchhhh-HHHHHH---------hhccccc----eEEEEeccc-CCCCCC-cc--cc---cHHHHH----
Confidence 66999999999999886 221000 0011111 899999999 999997 11 11 111113
Q ss_pred HHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccC
Q 012396 156 VFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (464)
Q Consensus 156 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~d 215 (464)
..+..|++.+ ...++.+.|+|+||..+-.+|.+.-+ .++++++.++...
T Consensus 76 ~~~~~~~~~~---~~~~~~l~G~S~Gg~~~~~~~~~~p~--------~~~~~v~~~~~~~ 124 (282)
T COG0596 76 DDLAALLDAL---GLEKVVLVGHSMGGAVALALALRHPD--------RVRGLVLIGPAPP 124 (282)
T ss_pred HHHHHHHHHh---CCCceEEEEecccHHHHHHHHHhcch--------hhheeeEecCCCC
Confidence 3344444443 22349999999997766666554432 5777777776554
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=96.52 E-value=0.0085 Score=58.48 Aligned_cols=55 Identities=16% Similarity=0.083 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCcc
Q 012396 152 RDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (464)
Q Consensus 152 ~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp~ 217 (464)
+++...+..++.. ....+++|+|.|+||+-+-.+|.+- +-.+++++..+|..++.
T Consensus 127 ~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~~--------p~~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 127 KELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLKN--------PDKYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHhC--------chhEEEEEEECCccCcc
Confidence 3344455555443 3455789999999998665555432 12478888889887753
No 75
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=96.47 E-value=0.011 Score=60.99 Aligned_cols=80 Identities=16% Similarity=0.176 Sum_probs=50.9
Q ss_pred ccceEEEeCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccc
Q 012396 119 EANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKK 198 (464)
Q Consensus 119 ~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~ 198 (464)
..|||-+|.| |.|-|.-..... +...+|+++.++|+...... .+.-.+++|+|+|.|||.+-.+|.+.
T Consensus 73 d~nVI~VDw~-g~g~s~y~~a~~----~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~------ 140 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPTSAA----YTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLT------ 140 (442)
T ss_pred CCEEEEEECC-CcCCCCCccccc----cHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhC------
Confidence 4799999998 656442111111 33556667766766544433 24456899999999999877766543
Q ss_pred cccccceeeecCCC
Q 012396 199 EELFNLKGIALGNP 212 (464)
Q Consensus 199 ~~~inLkGi~IGng 212 (464)
+-.|..|.+.+|
T Consensus 141 --p~rV~rItgLDP 152 (442)
T TIGR03230 141 --KHKVNRITGLDP 152 (442)
T ss_pred --CcceeEEEEEcC
Confidence 114667776665
No 76
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.37 E-value=0.0087 Score=56.81 Aligned_cols=108 Identities=22% Similarity=0.343 Sum_probs=71.3
Q ss_pred CCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHhHHH
Q 012396 74 ASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARD 153 (464)
Q Consensus 74 ~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~ 153 (464)
..-|+++.++|| |.|.|.+..|. -+.+.-. ..-++-+|.- |+|=|..++..++ +-+.-++|
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a-----------~el~s~~---~~r~~a~DlR-gHGeTk~~~e~dl---S~eT~~KD 132 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFA-----------SELKSKI---RCRCLALDLR-GHGETKVENEDDL---SLETMSKD 132 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHH-----------HHHHhhc---ceeEEEeecc-ccCccccCChhhc---CHHHHHHH
Confidence 457999999976 56766434431 0111111 1123779976 9999988776664 55677999
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCC
Q 012396 154 NLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGN 211 (464)
Q Consensus 154 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGn 211 (464)
+...++.+|..-| .+++|+|||.||..+.+.|..= . .-+|.|+.+.+
T Consensus 133 ~~~~i~~~fge~~----~~iilVGHSmGGaIav~~a~~k-----~--lpsl~Gl~viD 179 (343)
T KOG2564|consen 133 FGAVIKELFGELP----PQIILVGHSMGGAIAVHTAASK-----T--LPSLAGLVVID 179 (343)
T ss_pred HHHHHHHHhccCC----CceEEEeccccchhhhhhhhhh-----h--chhhhceEEEE
Confidence 9999998886543 3699999999998775544321 1 23578887655
No 77
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=96.36 E-value=0.19 Score=52.75 Aligned_cols=88 Identities=17% Similarity=0.277 Sum_probs=64.3
Q ss_pred HHHHHHHHhcCccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCccc
Q 012396 359 ITIVGKLVKAGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHE 438 (464)
Q Consensus 359 ~~~l~~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHm 438 (464)
-+.|....++|=|+|+|||..|.+++..+|.++-+++....+-. .. ++ .. -.-|..|.|.||-
T Consensus 343 ~pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~-~~---------~v----~d---F~RlF~vPGm~HC 405 (474)
T PF07519_consen 343 DPDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGA-LA---------DV----DD---FYRLFMVPGMGHC 405 (474)
T ss_pred CcCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccc-cc---------cc----cc---eeEEEecCCCccc
Confidence 35677777899999999999999999999999999886432211 00 01 11 1556899999998
Q ss_pred c--cCCCcHHHHHHHHHHHcCCCCCCC
Q 012396 439 A--PFSQPERSLVLFKAFLDSRPLPEA 463 (464)
Q Consensus 439 v--P~DqP~~al~mi~~fl~~~~l~~~ 463 (464)
- |-..|-.+|.-+.+|+.+..=|+.
T Consensus 406 ~gG~g~~~~d~l~aL~~WVE~G~AP~~ 432 (474)
T PF07519_consen 406 GGGPGPDPFDALTALVDWVENGKAPET 432 (474)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCCCe
Confidence 4 334666788888889987766654
No 78
>PRK10162 acetyl esterase; Provisional
Probab=96.32 E-value=0.012 Score=58.46 Aligned_cols=60 Identities=8% Similarity=0.033 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 154 NLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 154 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
.+.++.+..+++. ....++.|+|+|.||+.+-.+|.++.+... ....++|+++..|+++.
T Consensus 138 a~~~l~~~~~~~~-~d~~~i~l~G~SaGG~la~~~a~~~~~~~~--~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 138 VCCYFHQHAEDYG-INMSRIGFAGDSAGAMLALASALWLRDKQI--DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHhHHHhC-CChhHEEEEEECHHHHHHHHHHHHHHhcCC--CccChhheEEECCccCC
Confidence 3444444444441 234679999999999999999887765321 12467888888888764
No 79
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=96.05 E-value=0.16 Score=53.78 Aligned_cols=86 Identities=9% Similarity=0.047 Sum_probs=52.0
Q ss_pred ccceEEEeCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccc
Q 012396 119 EANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKK 198 (464)
Q Consensus 119 ~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~ 198 (464)
-..|+-||-+ |.|.|..... -++-+.+.+.+++..+.+.. ...+++++|+|.||..+...+..+.....
T Consensus 220 Gf~V~~iDwr-gpg~s~~~~~------~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~~~- 288 (532)
T TIGR01838 220 GHTVFVISWR-NPDASQADKT------FDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAARGD- 288 (532)
T ss_pred CcEEEEEECC-CCCcccccCC------hhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHhCC-
Confidence 3578889987 8887743211 11122234555666665544 35689999999999987653332222110
Q ss_pred cccccceeeecCCCccCcc
Q 012396 199 EELFNLKGIALGNPVLEFA 217 (464)
Q Consensus 199 ~~~inLkGi~IGng~~dp~ 217 (464)
.-.++++++.+..+|..
T Consensus 289 --~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 289 --DKRIKSATFFTTLLDFS 305 (532)
T ss_pred --CCccceEEEEecCcCCC
Confidence 11478888888777754
No 80
>PRK10115 protease 2; Provisional
Probab=95.97 E-value=0.027 Score=61.91 Aligned_cols=137 Identities=12% Similarity=-0.014 Sum_probs=75.0
Q ss_pred CCceEEEEEEecCC--CCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCcc-ccC
Q 012396 58 KQRALFYYFAEAET--DPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGV-GFS 134 (464)
Q Consensus 58 ~~~~lfy~f~es~~--~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGt-GfS 134 (464)
.+..+-.|++.... .....|+||+.+||||.|... ++..+ -.+|....=++.+=.+-|. ||-
T Consensus 425 DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p-~f~~~--------------~~~l~~rG~~v~~~n~RGs~g~G 489 (686)
T PRK10115 425 DGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDA-DFSFS--------------RLSLLDRGFVYAIVHVRGGGELG 489 (686)
T ss_pred CCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC-CccHH--------------HHHHHHCCcEEEEEEcCCCCccC
Confidence 34555555443221 234569999999999998653 32211 1245443333333334444 333
Q ss_pred cccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 135 YSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 135 y~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
..-....... .-..+-+|+.++.+...++ .--....+.|.|-||||..+-.++.+- +-.+++++.+.|++
T Consensus 490 ~~w~~~g~~~-~k~~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~~~--------Pdlf~A~v~~vp~~ 559 (686)
T PRK10115 490 QQWYEDGKFL-KKKNTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAINQR--------PELFHGVIAQVPFV 559 (686)
T ss_pred HHHHHhhhhh-cCCCcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHhcC--------hhheeEEEecCCch
Confidence 2110100000 1113455776666544433 334456899999999998554443221 22589999999999
Q ss_pred Ccccc
Q 012396 215 EFATD 219 (464)
Q Consensus 215 dp~~~ 219 (464)
|....
T Consensus 560 D~~~~ 564 (686)
T PRK10115 560 DVVTT 564 (686)
T ss_pred hHhhh
Confidence 88543
No 81
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.91 E-value=0.027 Score=46.01 Aligned_cols=65 Identities=25% Similarity=0.386 Sum_probs=54.6
Q ss_pred CccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCcHHHH
Q 012396 369 GIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSL 448 (464)
Q Consensus 369 ~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~~al 448 (464)
..+||+.+|..|.++|+.+.+...+.| ++ -..+++.++||-+-...-.-+.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l----------------------------~~-s~lvt~~g~gHg~~~~~s~C~~ 84 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL----------------------------PG-SRLVTVDGAGHGVYAGGSPCVD 84 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC----------------------------CC-ceEEEEeccCcceecCCChHHH
Confidence 389999999999999999999998843 13 3459999999999875556789
Q ss_pred HHHHHHHcCCCCCC
Q 012396 449 VLFKAFLDSRPLPE 462 (464)
Q Consensus 449 ~mi~~fl~~~~l~~ 462 (464)
+++.+|+....+|+
T Consensus 85 ~~v~~yl~~G~lP~ 98 (103)
T PF08386_consen 85 KAVDDYLLDGTLPA 98 (103)
T ss_pred HHHHHHHHcCCCCC
Confidence 99999999888885
No 82
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=95.87 E-value=0.022 Score=63.04 Aligned_cols=136 Identities=21% Similarity=0.177 Sum_probs=78.4
Q ss_pred ceEEEEEEecCC--CCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcc-cccceEEEeCCCccccCcc
Q 012396 60 RALFYYFAEAET--DPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWN-REANMLFLETPIGVGFSYS 136 (464)
Q Consensus 60 ~~lfy~f~es~~--~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~-~~an~l~iDqPvGtGfSy~ 136 (464)
...++++.-..+ +.+.-|++++..||||+-+.. +.| .+..|++.+. .-+=++.|| +.|+|+.-.
T Consensus 508 ~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~-~~~-----------~~~~~~~~~s~~g~~v~~vd-~RGs~~~G~ 574 (755)
T KOG2100|consen 508 ITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVT-SKF-----------SVDWNEVVVSSRGFAVLQVD-GRGSGGYGW 574 (755)
T ss_pred EEEEEEEecCCCCCCCCCCCEEEEecCCCCcceee-eeE-----------EecHHHHhhccCCeEEEEEc-CCCcCCcch
Confidence 345566654433 335679999999999943332 222 2334455444 346678889 678886533
Q ss_pred cCCCC-ccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccC
Q 012396 137 KDASS-YQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (464)
Q Consensus 137 ~~~~~-~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~d 215 (464)
.-... +....+ ...+|...+++.+.+.+ ..-..++.|+|-||||... ..++..-. .--+|.-+..+|++|
T Consensus 575 ~~~~~~~~~lG~-~ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy~t----~~~l~~~~---~~~fkcgvavaPVtd 645 (755)
T KOG2100|consen 575 DFRSALPRNLGD-VEVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGYLT----LKLLESDP---GDVFKCGVAVAPVTD 645 (755)
T ss_pred hHHHHhhhhcCC-cchHHHHHHHHHHHhcc-cccHHHeEEeccChHHHHH----HHHhhhCc---CceEEEEEEecceee
Confidence 21111 101111 23456666666666665 4445679999999999643 33333211 123565577788888
Q ss_pred cc
Q 012396 216 FA 217 (464)
Q Consensus 216 p~ 217 (464)
..
T Consensus 646 ~~ 647 (755)
T KOG2100|consen 646 WL 647 (755)
T ss_pred ee
Confidence 75
No 83
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=95.71 E-value=0.056 Score=57.93 Aligned_cols=129 Identities=19% Similarity=0.099 Sum_probs=77.2
Q ss_pred CCceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcc-cccceEEEeCCCccccCcc
Q 012396 58 KQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWN-REANMLFLETPIGVGFSYS 136 (464)
Q Consensus 58 ~~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~-~~an~l~iDqPvGtGfSy~ 136 (464)
.+..|+..++.-.. .+..|+||.++|-...+... . +.. . ....-|. +-..++-+|.+ |+|.|-+
T Consensus 5 DG~~L~~~~~~P~~-~~~~P~Il~~~gyg~~~~~~-~-----~~~------~-~~~~~l~~~Gy~vv~~D~R-G~g~S~g 69 (550)
T TIGR00976 5 DGTRLAIDVYRPAG-GGPVPVILSRTPYGKDAGLR-W-----GLD------K-TEPAWFVAQGYAVVIQDTR-GRGASEG 69 (550)
T ss_pred CCCEEEEEEEecCC-CCCCCEEEEecCCCCchhhc-c-----ccc------c-ccHHHHHhCCcEEEEEecc-ccccCCC
Confidence 34568766554322 34689999999654432210 0 000 0 0111232 46889999988 9999976
Q ss_pred cCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 137 KDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 137 ~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
... .+ . ...++|+.++++ |+.+.|. .+.++.++|.||||..+-.+|.. . +-.|++++..+++.|.
T Consensus 70 ~~~-~~---~-~~~~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~---~-----~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 70 EFD-LL---G-SDEAADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAVTQLLAAVL---Q-----PPALRAIAPQEGVWDL 134 (550)
T ss_pred ceE-ec---C-cccchHHHHHHH-HHHhCCC-CCCcEEEEEeChHHHHHHHHhcc---C-----CCceeEEeecCcccch
Confidence 432 11 1 334556665555 6666553 34689999999999765544432 1 2369999988888764
No 84
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=95.50 E-value=0.048 Score=55.73 Aligned_cols=66 Identities=20% Similarity=0.118 Sum_probs=52.9
Q ss_pred cCccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcC-CcccccCCCcHH
Q 012396 368 AGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRG-ASHEAPFSQPER 446 (464)
Q Consensus 368 ~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~g-AGHmvP~DqP~~ 446 (464)
-..|||+..|+.|.++|....+...+.+... ..+ .+++.|.+ +||+.+.++|+.
T Consensus 322 I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~------------------------~~~-a~l~~I~s~~GH~~~le~p~~ 376 (389)
T PRK06765 322 IEANVLMIPCKQDLLQPPRYNYKMVDILQKQ------------------------GKY-AEVYEIESINGHMAGVFDIHL 376 (389)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHhhhc------------------------CCC-eEEEEECCCCCcchhhcCHHH
Confidence 3589999999999999988777666644210 014 77888985 999999999999
Q ss_pred HHHHHHHHHcCC
Q 012396 447 SLVLFKAFLDSR 458 (464)
Q Consensus 447 al~mi~~fl~~~ 458 (464)
..+.+.+|+..+
T Consensus 377 ~~~~I~~FL~~~ 388 (389)
T PRK06765 377 FEKKIYEFLNRK 388 (389)
T ss_pred HHHHHHHHHccc
Confidence 999999999753
No 85
>PLN00021 chlorophyllase
Probab=95.38 E-value=0.05 Score=53.90 Aligned_cols=122 Identities=15% Similarity=0.081 Sum_probs=69.8
Q ss_pred EEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCCccc
Q 012396 65 YFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQG 144 (464)
Q Consensus 65 ~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~ 144 (464)
.+.++. ..+.|+|||++|+.+.+..+ .-+.+ .+ -+| -..++.+|.+ | ++.... .
T Consensus 43 v~~P~~--~g~~PvVv~lHG~~~~~~~y-~~l~~---------~L----as~--G~~VvapD~~-g--~~~~~~---~-- 96 (313)
T PLN00021 43 VATPSE--AGTYPVLLFLHGYLLYNSFY-SQLLQ---------HI----ASH--GFIVVAPQLY-T--LAGPDG---T-- 96 (313)
T ss_pred EEeCCC--CCCCCEEEEECCCCCCcccH-HHHHH---------HH----HhC--CCEEEEecCC-C--cCCCCc---h--
Confidence 444542 45689999999998766543 11100 01 122 3567888877 4 322111 1
Q ss_pred cChHHhHHHHHHHHHHHHHH-CC---CCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 145 VGDKITARDNLVFLKNWFLK-FP---QYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 145 ~~~~~~a~~~~~fL~~f~~~-fp---~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
.+.+.+.+++.++.+-++. .| +....+++|+|+|+||+.+-.+|.+..+.. ....+++++..+|+...
T Consensus 97 -~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~---~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 97 -DEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS---LPLKFSALIGLDPVDGT 168 (313)
T ss_pred -hhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc---cccceeeEEeecccccc
Confidence 1222344555666554332 22 233457999999999998888876543311 12468888888886543
No 86
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=95.26 E-value=0.04 Score=51.41 Aligned_cols=101 Identities=15% Similarity=0.105 Sum_probs=65.2
Q ss_pred EEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCccc-ccceEEEeCCCccccCcccCCCCccccChHHhHHHHHH
Q 012396 78 LVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNR-EANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLV 156 (464)
Q Consensus 78 l~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~-~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~ 156 (464)
.|+++.+|-|+++.+..+... ..+ ..+|..|+.| |.+ . .. .. ..+-++.|+.+.+
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~-----------------l~~~~~~v~~i~~~-~~~---~-~~-~~-~~si~~la~~y~~ 57 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARA-----------------LPDDVIGVYGIEYP-GRG---D-DE-PP-PDSIEELASRYAE 57 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHH-----------------HTTTEEEEEEECST-TSC---T-TS-HE-ESSHHHHHHHHHH
T ss_pred eEEEEcCCccCHHHHHHHHHh-----------------CCCCeEEEEEEecC-CCC---C-CC-CC-CCCHHHHHHHHHH
Confidence 578999888877665222111 111 4678899988 665 1 11 11 1144556665555
Q ss_pred HHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCc
Q 012396 157 FLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (464)
Q Consensus 157 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~ 213 (464)
.|+ +..|+ .|++|+|.|+||..+=.+|.+|.++. .....|++.++.
T Consensus 58 ~I~---~~~~~---gp~~L~G~S~Gg~lA~E~A~~Le~~G-----~~v~~l~liD~~ 103 (229)
T PF00975_consen 58 AIR---ARQPE---GPYVLAGWSFGGILAFEMARQLEEAG-----EEVSRLILIDSP 103 (229)
T ss_dssp HHH---HHTSS---SSEEEEEETHHHHHHHHHHHHHHHTT------SESEEEEESCS
T ss_pred Hhh---hhCCC---CCeeehccCccHHHHHHHHHHHHHhh-----hccCceEEecCC
Confidence 543 34443 39999999999999999999998742 357788888854
No 87
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=95.17 E-value=0.088 Score=49.24 Aligned_cols=43 Identities=19% Similarity=0.236 Sum_probs=30.9
Q ss_pred HHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 163 LKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 163 ~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
+++ ..-.+.+|++|.|-||...-.++...-+ -+.++++..|.-
T Consensus 90 ~~~-~iD~~RVyv~G~S~Gg~ma~~la~~~pd--------~faa~a~~sG~~ 132 (220)
T PF10503_consen 90 ARY-NIDPSRVYVTGLSNGGMMANVLACAYPD--------LFAAVAVVSGVP 132 (220)
T ss_pred hhc-ccCCCceeeEEECHHHHHHHHHHHhCCc--------cceEEEeecccc
Confidence 344 4567789999999999877766654322 577888877763
No 88
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=94.44 E-value=0.04 Score=55.91 Aligned_cols=81 Identities=22% Similarity=0.198 Sum_probs=52.7
Q ss_pred cccceEEEeCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhcc
Q 012396 118 REANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNK 197 (464)
Q Consensus 118 ~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~ 197 (464)
+--+||=||-| |||+|.... +. .| ...++..+-.|+...|+.-...+-++|-|+||.|++.+|..=
T Consensus 217 rGiA~LtvDmP-G~G~s~~~~---l~--~D---~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le----- 282 (411)
T PF06500_consen 217 RGIAMLTVDMP-GQGESPKWP---LT--QD---SSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALE----- 282 (411)
T ss_dssp CT-EEEEE--T-TSGGGTTT----S---S----CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHT-----
T ss_pred CCCEEEEEccC-CCcccccCC---CC--cC---HHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhc-----
Confidence 45579999999 999985322 21 11 124566777788889999888999999999999999888532
Q ss_pred ccccccceeeecCCCccC
Q 012396 198 KEELFNLKGIALGNPVLE 215 (464)
Q Consensus 198 ~~~~inLkGi~IGng~~d 215 (464)
.-.|||++.-.|.++
T Consensus 283 ---~~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 283 ---DPRLKAVVALGAPVH 297 (411)
T ss_dssp ---TTT-SEEEEES---S
T ss_pred ---ccceeeEeeeCchHh
Confidence 125888665555543
No 89
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=93.95 E-value=0.081 Score=45.13 Aligned_cols=93 Identities=20% Similarity=0.274 Sum_probs=58.4
Q ss_pred EEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcc-cccceEEEeCCCccccCcccCCCCccccChHHhHHHHHH
Q 012396 78 LVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWN-REANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLV 156 (464)
Q Consensus 78 l~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~-~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~ 156 (464)
+||+++|+.|.+..+ ..+.+ .+. +-.+++.+|.| +.|-|.. ...++++++
T Consensus 1 ~vv~~HG~~~~~~~~-~~~~~----------------~l~~~G~~v~~~~~~-~~~~~~~-----------~~~~~~~~~ 51 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDY-QPLAE----------------ALAEQGYAVVAFDYP-GHGDSDG-----------ADAVERVLA 51 (145)
T ss_dssp EEEEECTTTTTTHHH-HHHHH----------------HHHHTTEEEEEESCT-TSTTSHH-----------SHHHHHHHH
T ss_pred CEEEECCCCCCHHHH-HHHHH----------------HHHHCCCEEEEEecC-CCCccch-----------hHHHHHHHH
Confidence 589999998876654 22211 222 23678888988 7776621 112333333
Q ss_pred HHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCc
Q 012396 157 FLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (464)
Q Consensus 157 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~ 213 (464)
.+. +..+ ..++++|+|.|.||..+..++.+- ..+++++..+|+
T Consensus 52 ~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~---------~~v~~~v~~~~~ 94 (145)
T PF12695_consen 52 DIR---AGYP--DPDRIILIGHSMGGAIAANLAARN---------PRVKAVVLLSPY 94 (145)
T ss_dssp HHH---HHHC--TCCEEEEEEETHHHHHHHHHHHHS---------TTESEEEEESES
T ss_pred HHH---hhcC--CCCcEEEEEEccCcHHHHHHhhhc---------cceeEEEEecCc
Confidence 332 3333 457899999999999777766632 268888888874
No 90
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=92.83 E-value=0.7 Score=44.64 Aligned_cols=111 Identities=17% Similarity=0.153 Sum_probs=54.8
Q ss_pred CCCEEEEECC-CCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCC--ccccChHHhH
Q 012396 75 SKPLVLWLNG-GPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASS--YQGVGDKITA 151 (464)
Q Consensus 75 ~~Pl~lwlnG-GPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~--~~~~~~~~~a 151 (464)
++|.+|=++- |.=.-|=+-++|.- | .-.--.+.+-++-||.| |-..--.+-..+ |+ +-++-|
T Consensus 22 ~kp~ilT~HDvGlNh~scF~~ff~~--~----------~m~~i~~~f~i~Hi~aP-Gqe~ga~~~p~~y~yP--smd~LA 86 (283)
T PF03096_consen 22 NKPAILTYHDVGLNHKSCFQGFFNF--E----------DMQEILQNFCIYHIDAP-GQEEGAATLPEGYQYP--SMDQLA 86 (283)
T ss_dssp TS-EEEEE--TT--HHHHCHHHHCS--H----------HHHHHHTTSEEEEEE-T-TTSTT-----TT-------HHHHH
T ss_pred CCceEEEeccccccchHHHHHHhcc--h----------hHHHHhhceEEEEEeCC-CCCCCccccccccccc--CHHHHH
Confidence 7888888874 45455522155522 2 11234466778889988 766533322333 33 345567
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccC
Q 012396 152 RDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (464)
Q Consensus 152 ~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~d 215 (464)
+++...|+.| +=+.+.-+|+--|......+|. ++ +-.+-|+++.|+...
T Consensus 87 e~l~~Vl~~f-------~lk~vIg~GvGAGAnIL~rfAl---~~-----p~~V~GLiLvn~~~~ 135 (283)
T PF03096_consen 87 EMLPEVLDHF-------GLKSVIGFGVGAGANILARFAL---KH-----PERVLGLILVNPTCT 135 (283)
T ss_dssp CTHHHHHHHH-------T---EEEEEETHHHHHHHHHHH---HS-----GGGEEEEEEES---S
T ss_pred HHHHHHHHhC-------CccEEEEEeeccchhhhhhccc---cC-----ccceeEEEEEecCCC
Confidence 7766666543 2346888999876555544553 22 225889999886543
No 91
>PRK11460 putative hydrolase; Provisional
Probab=92.71 E-value=0.12 Score=48.79 Aligned_cols=62 Identities=13% Similarity=0.184 Sum_probs=46.8
Q ss_pred CccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCcHHHH
Q 012396 369 GIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSL 448 (464)
Q Consensus 369 ~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~~al 448 (464)
..+|++.+|+.|.++|..-.++..+.|+.. + .+ .++.++.++||.+..+.-+.+.
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~-g-----------------------~~-~~~~~~~~~gH~i~~~~~~~~~ 202 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISL-G-----------------------GD-VTLDIVEDLGHAIDPRLMQFAL 202 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHC-C-----------------------CC-eEEEEECCCCCCCCHHHHHHHH
Confidence 479999999999999999999888876421 1 13 7788889999999765555555
Q ss_pred HHHHHHH
Q 012396 449 VLFKAFL 455 (464)
Q Consensus 449 ~mi~~fl 455 (464)
+.+++++
T Consensus 203 ~~l~~~l 209 (232)
T PRK11460 203 DRLRYTV 209 (232)
T ss_pred HHHHHHc
Confidence 5555555
No 92
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=92.54 E-value=0.31 Score=44.82 Aligned_cols=121 Identities=20% Similarity=0.311 Sum_probs=77.9
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccC
Q 012396 59 QRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKD 138 (464)
Q Consensus 59 ~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~ 138 (464)
+..|.=|...+++ ++|++++|+|.-|-=+- +. | ...-.=-+=..||+-+|-- |-|-|.+..
T Consensus 64 ~vtL~a~~~~~E~---S~pTlLyfh~NAGNmGh----r~---~--------i~~~fy~~l~mnv~ivsYR-GYG~S~Gsp 124 (300)
T KOG4391|consen 64 KVTLDAYLMLSES---SRPTLLYFHANAGNMGH----RL---P--------IARVFYVNLKMNVLIVSYR-GYGKSEGSP 124 (300)
T ss_pred ceeEeeeeecccC---CCceEEEEccCCCcccc----hh---h--------HHHHHHHHcCceEEEEEee-ccccCCCCc
Confidence 3456644444433 79999999987663222 10 0 0000111235789999976 999888754
Q ss_pred CC-CccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccC
Q 012396 139 AS-SYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (464)
Q Consensus 139 ~~-~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~d 215 (464)
.. +.. .|.++| -..+-..|....+++.++|.|-||.-+-.+|.+-.+ .+.++++-|-+++
T Consensus 125 sE~GL~--lDs~av-------ldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~--------ri~~~ivENTF~S 185 (300)
T KOG4391|consen 125 SEEGLK--LDSEAV-------LDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD--------RISAIIVENTFLS 185 (300)
T ss_pred ccccee--ccHHHH-------HHHHhcCccCCcceEEEEecccCCeeEEEeeccchh--------heeeeeeechhcc
Confidence 32 221 343333 234456788889999999999999988887776544 6889999998775
No 93
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=92.50 E-value=0.9 Score=46.09 Aligned_cols=120 Identities=23% Similarity=0.340 Sum_probs=74.9
Q ss_pred EEEEEEecCC----CCCCCCEEEEECCCCCchhhh-----hhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccc
Q 012396 62 LFYYFAEAET----DPASKPLVLWLNGGPGCSSLG-----VGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVG 132 (464)
Q Consensus 62 lfy~f~es~~----~~~~~Pl~lwlnGGPG~Ss~~-----~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtG 132 (464)
..=|+..... +..++|++|.+.|=.|.|... +...++.| ++ ++-.- +-|.|
T Consensus 107 ~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r------------------~VVfN-~RG~~ 166 (409)
T KOG1838|consen 107 TLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YR------------------VVVFN-HRGLG 166 (409)
T ss_pred EEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cE------------------EEEEC-CCCCC
Confidence 3346654332 246789999999999888763 12333334 22 22222 56989
Q ss_pred cCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCC
Q 012396 133 FSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNP 212 (464)
Q Consensus 133 fSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng 212 (464)
.|--++..-|.- .. .+|+-++++---++||+ ++++.+|.|+||.. +..++-+..++ .-=..|++|-||
T Consensus 167 g~~LtTpr~f~a-g~---t~Dl~~~v~~i~~~~P~---a~l~avG~S~Gg~i---L~nYLGE~g~~--~~l~~a~~v~~P 234 (409)
T KOG1838|consen 167 GSKLTTPRLFTA-GW---TEDLREVVNHIKKRYPQ---APLFAVGFSMGGNI---LTNYLGEEGDN--TPLIAAVAVCNP 234 (409)
T ss_pred CCccCCCceeec-CC---HHHHHHHHHHHHHhCCC---CceEEEEecchHHH---HHHHhhhccCC--CCceeEEEEecc
Confidence 888777665532 22 23665666666677885 58999999999874 45666553222 223567888888
Q ss_pred c
Q 012396 213 V 213 (464)
Q Consensus 213 ~ 213 (464)
|
T Consensus 235 w 235 (409)
T KOG1838|consen 235 W 235 (409)
T ss_pred c
Confidence 8
No 94
>PRK11460 putative hydrolase; Provisional
Probab=92.01 E-value=0.53 Score=44.37 Aligned_cols=50 Identities=6% Similarity=-0.132 Sum_probs=29.7
Q ss_pred HHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 156 VFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 156 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
++++...++. ....++++|+|.|.||..+-.++.+- +-.+.+++..+|.+
T Consensus 89 ~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~~~--------~~~~~~vv~~sg~~ 138 (232)
T PRK11460 89 ETVRYWQQQS-GVGASATALIGFSQGAIMALEAVKAE--------PGLAGRVIAFSGRY 138 (232)
T ss_pred HHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHHhC--------CCcceEEEEecccc
Confidence 3444433333 34456899999999999886655431 11245566566653
No 95
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=91.09 E-value=1.1 Score=47.10 Aligned_cols=35 Identities=26% Similarity=0.258 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHH
Q 012396 153 DNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQL 188 (464)
Q Consensus 153 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~ 188 (464)
..++++++-...|. -..+++.|+|+|.||+.+-.+
T Consensus 159 ~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~ 193 (493)
T cd00312 159 LALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLL 193 (493)
T ss_pred HHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhH
Confidence 34567777777774 345689999999999765443
No 96
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=91.01 E-value=1.2 Score=42.88 Aligned_cols=117 Identities=20% Similarity=0.265 Sum_probs=66.1
Q ss_pred CCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCC----CccccChHHhH
Q 012396 76 KPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDAS----SYQGVGDKITA 151 (464)
Q Consensus 76 ~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~----~~~~~~~~~~a 151 (464)
+++++|+-|-||.-+-. --|.+ .+..+- +....++=+... |+|...... .....+-++..
T Consensus 2 ~~li~~IPGNPGlv~fY-~~Fl~---------~L~~~l---~~~~~i~~ish~---Gh~~~~~~~~~~~~~~~~sL~~QI 65 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFY-EEFLS---------ALYEKL---NPQFEILGISHA---GHSTSPSNSKFSPNGRLFSLQDQI 65 (266)
T ss_pred cEEEEEECCCCChHHHH-HHHHH---------HHHHhC---CCCCeeEEecCC---CCcCCcccccccCCCCccCHHHHH
Confidence 68999999999988874 22211 121111 344555555533 444432220 01111444455
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 152 RDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 152 ~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
+.-++||+++....+ ..+.+++|.|||-|+..+-.+..++. ....+++++++-=|-+
T Consensus 66 ~hk~~~i~~~~~~~~-~~~~~liLiGHSIGayi~levl~r~~-----~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 66 EHKIDFIKELIPQKN-KPNVKLILIGHSIGAYIALEVLKRLP-----DLKFRVKKVILLFPTI 122 (266)
T ss_pred HHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHHHHHHHHHhcc-----ccCCceeEEEEeCCcc
Confidence 566778888887664 24678999999998654444444443 1134666666555544
No 97
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=90.40 E-value=1.8 Score=42.61 Aligned_cols=46 Identities=22% Similarity=0.246 Sum_probs=38.3
Q ss_pred CCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCccc
Q 012396 169 RNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFAT 218 (464)
Q Consensus 169 ~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp~~ 218 (464)
..+++.|+|+|-||+.+-.+|....+.. ....++.++..|++|...
T Consensus 150 dp~~i~v~GdSAGG~La~~~a~~~~~~~----~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 150 DPSRIAVAGDSAGGHLALALALAARDRG----LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred CccceEEEecCcccHHHHHHHHHHHhcC----CCCceEEEEEecccCCcc
Confidence 3678999999999999999999887741 346788999999998865
No 98
>PLN02454 triacylglycerol lipase
Probab=89.75 E-value=0.8 Score=46.66 Aligned_cols=66 Identities=17% Similarity=0.208 Sum_probs=50.0
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccC
Q 012396 149 ITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (464)
Q Consensus 149 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~d 215 (464)
.+.+++...++...+++|..+ ..++|+|||.||..+-..|..|.........++++.+..|.|-+.
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRVG 272 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQVG 272 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCccc
Confidence 456788889999999898764 369999999999999988888876322112456777888887763
No 99
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=89.61 E-value=0.9 Score=38.67 Aligned_cols=60 Identities=27% Similarity=0.316 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 151 ARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 151 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
.+.+.+.|++..+++| ...+.|+|||-||-.+..+|..+.++.... ..+++-+..|.|-+
T Consensus 47 ~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~~-~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 47 YDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPSS-SSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTTS-TTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhccccc-ccceeeeecCCccc
Confidence 4456667777777787 457999999999999999999998754221 35677788887765
No 100
>PRK10566 esterase; Provisional
Probab=89.53 E-value=0.65 Score=43.77 Aligned_cols=62 Identities=27% Similarity=0.389 Sum_probs=46.2
Q ss_pred CccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCcHHHH
Q 012396 369 GIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSL 448 (464)
Q Consensus 369 ~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~~al 448 (464)
..+||+.+|+.|.+++...++++.+.++.. +. ..+ ++++++.|+||.+. | .++
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~-g~---------------------~~~-~~~~~~~~~~H~~~---~-~~~ 238 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRER-GL---------------------DKN-LTCLWEPGVRHRIT---P-EAL 238 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhc-CC---------------------Ccc-eEEEecCCCCCccC---H-HHH
Confidence 469999999999999999998888766321 10 014 88899999999974 3 456
Q ss_pred HHHHHHHcC
Q 012396 449 VLFKAFLDS 457 (464)
Q Consensus 449 ~mi~~fl~~ 457 (464)
+-+.+||..
T Consensus 239 ~~~~~fl~~ 247 (249)
T PRK10566 239 DAGVAFFRQ 247 (249)
T ss_pred HHHHHHHHh
Confidence 666668753
No 101
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=89.28 E-value=0.81 Score=44.23 Aligned_cols=59 Identities=15% Similarity=0.148 Sum_probs=47.4
Q ss_pred CccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCcHHHH
Q 012396 369 GIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSL 448 (464)
Q Consensus 369 ~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~~al 448 (464)
.+++++..|..|.++|..-.+++++.+ .. -+.+.+. +||+.+..+|++..
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~----------------------------~~-~~~~~l~-~gH~p~ls~P~~~~ 260 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRW----------------------------PP-SQVYELE-SDHSPFFSTPFLLF 260 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhC----------------------------Cc-cEEEEEC-CCCCccccCHHHHH
Confidence 579999999999999988777766632 11 2446675 99999999999999
Q ss_pred HHHHHHHcC
Q 012396 449 VLFKAFLDS 457 (464)
Q Consensus 449 ~mi~~fl~~ 457 (464)
.+|.++...
T Consensus 261 ~~i~~~a~~ 269 (273)
T PLN02211 261 GLLIKAAAS 269 (273)
T ss_pred HHHHHHHHH
Confidence 999988653
No 102
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=89.12 E-value=0.64 Score=42.62 Aligned_cols=45 Identities=27% Similarity=0.302 Sum_probs=37.5
Q ss_pred CCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 168 YRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 168 ~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
+...+++|+|+|-||+.+-.++..+.+.. ...++++++..|++|.
T Consensus 68 ~d~~~i~l~G~SAGg~la~~~~~~~~~~~----~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 68 IDPERIVLIGDSAGGHLALSLALRARDRG----LPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHHHHHTT----TCHESEEEEESCHSST
T ss_pred ccccceEEeecccccchhhhhhhhhhhhc----ccchhhhhcccccccc
Confidence 45668999999999999999998887743 2359999999999877
No 103
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=89.09 E-value=0.68 Score=43.78 Aligned_cols=69 Identities=10% Similarity=0.131 Sum_probs=44.4
Q ss_pred HHhHHHHHHHHHHHHHHCCCC-CCCCEEEEeeccccccHHHHHHHHHHhccc-cccccceeeecCCCccCc
Q 012396 148 KITARDNLVFLKNWFLKFPQY-RNRSLFITGESYAGHYIPQLADLMLEFNKK-EELFNLKGIALGNPVLEF 216 (464)
Q Consensus 148 ~~~a~~~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvP~~a~~i~~~n~~-~~~inLkGi~IGng~~dp 216 (464)
.+.|...-..|..|+...-+. ...+++|.+||+|+.-+-.....+...... ...-+|..|++.+|-+|.
T Consensus 69 ~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 69 RESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred hhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 334433334444444443222 456899999999999888887777764331 112378888988888776
No 104
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=89.08 E-value=1 Score=41.73 Aligned_cols=59 Identities=27% Similarity=0.499 Sum_probs=42.4
Q ss_pred CccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCcHHHH
Q 012396 369 GIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSL 448 (464)
Q Consensus 369 ~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~~al 448 (464)
+.+|++.+|+.|.++|....+...+.|+. .+ .+ ++|.+..|.||-++ .+.+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~-~~-----------------------~~-v~~~~~~g~gH~i~----~~~~ 205 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKA-AG-----------------------AN-VEFHEYPGGGHEIS----PEEL 205 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHC-TT------------------------G-EEEEEETT-SSS------HHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHh-cC-----------------------CC-EEEEEcCCCCCCCC----HHHH
Confidence 57999999999999999998888886641 11 14 88999999999996 4667
Q ss_pred HHHHHHHc
Q 012396 449 VLFKAFLD 456 (464)
Q Consensus 449 ~mi~~fl~ 456 (464)
+.+.+||.
T Consensus 206 ~~~~~~l~ 213 (216)
T PF02230_consen 206 RDLREFLE 213 (216)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77777875
No 105
>COG4099 Predicted peptidase [General function prediction only]
Probab=89.07 E-value=5.1 Score=38.89 Aligned_cols=125 Identities=18% Similarity=0.203 Sum_probs=65.7
Q ss_pred CCCceEEEEEEecCC---CCCCCCEEEEECCCCCchhhh-------hhhhccCCCcccCCCcccccCCCcccccceEEEe
Q 012396 57 KKQRALFYYFAEAET---DPASKPLVLWLNGGPGCSSLG-------VGAFSENGPFRPNGQVLVRNEYSWNREANMLFLE 126 (464)
Q Consensus 57 ~~~~~lfy~f~es~~---~~~~~Pl~lwlnGGPG~Ss~~-------~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iD 126 (464)
..+.+|=|-+|.-+. +.+.-||+|||+|+--.++-. .|..-+-|| -.=.|+=
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~p------------------edqcfVl 230 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGP------------------EDQCFVL 230 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecc------------------cCceEEE
Confidence 457789998886532 334449999999855443331 133333333 1114454
Q ss_pred CCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhcccccccccee
Q 012396 127 TPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKG 206 (464)
Q Consensus 127 qPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkG 206 (464)
.|= |..--.+... +.+.--....+.+.+=+...+..-.+.+|+.|-|-||.-.-+++.+.-+ -+.+
T Consensus 231 APQ-----y~~if~d~e~-~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd--------fFAa 296 (387)
T COG4099 231 APQ-----YNPIFADSEE-KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD--------FFAA 296 (387)
T ss_pred ccc-----cccccccccc-ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch--------hhhe
Confidence 452 2211000000 0011111223444444555667777899999999999876666655433 3555
Q ss_pred eecCCCc
Q 012396 207 IALGNPV 213 (464)
Q Consensus 207 i~IGng~ 213 (464)
.+...|-
T Consensus 297 a~~iaG~ 303 (387)
T COG4099 297 AVPIAGG 303 (387)
T ss_pred eeeecCC
Confidence 5555443
No 106
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=88.36 E-value=1.2 Score=49.30 Aligned_cols=100 Identities=16% Similarity=0.178 Sum_probs=59.0
Q ss_pred CCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccC-cccC--------CC--Ccc
Q 012396 75 SKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFS-YSKD--------AS--SYQ 143 (464)
Q Consensus 75 ~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfS-y~~~--------~~--~~~ 143 (464)
..|+|++++|=.|....+ -.+.+ .+. .+-..++-+|.| |.|-| ...+ .. .|-
T Consensus 448 g~P~VVllHG~~g~~~~~-~~lA~---------~La------~~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~y~ 510 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENA-LAFAG---------TLA------AAGVATIAIDHP-LHGARSFDANASGVNATNANVLAYM 510 (792)
T ss_pred CCcEEEEeCCCCCCHHHH-HHHHH---------HHH------hCCcEEEEeCCC-CCCccccccccccccccccCcccee
Confidence 358999999877766654 11100 011 123568899998 99988 3311 00 110
Q ss_pred --------ccChHHhHHHHHHHHHHHH------H---HCCCCCCCCEEEEeeccccccHHHHHHH
Q 012396 144 --------GVGDKITARDNLVFLKNWF------L---KFPQYRNRSLFITGESYAGHYIPQLADL 191 (464)
Q Consensus 144 --------~~~~~~~a~~~~~fL~~f~------~---~fp~~~~~~~yi~GESYgG~yvP~~a~~ 191 (464)
..+-.+.+.|++......- + .+..+...++++.|||.||..+..++..
T Consensus 511 Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 511 NLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred ccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 0133556667654433222 1 2334556799999999999998888743
No 107
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=88.36 E-value=0.76 Score=41.84 Aligned_cols=51 Identities=22% Similarity=0.321 Sum_probs=36.6
Q ss_pred HHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCccccc
Q 012396 156 VFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFATDF 220 (464)
Q Consensus 156 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp~~~~ 220 (464)
+.+.+.++.. ....+.|+|-|.||.|+-.+|.+. +++. ++.||.+.|...+
T Consensus 47 ~~l~~~i~~~---~~~~~~liGSSlGG~~A~~La~~~----------~~~a-vLiNPav~p~~~l 97 (187)
T PF05728_consen 47 AQLEQLIEEL---KPENVVLIGSSLGGFYATYLAERY----------GLPA-VLINPAVRPYELL 97 (187)
T ss_pred HHHHHHHHhC---CCCCeEEEEEChHHHHHHHHHHHh----------CCCE-EEEcCCCCHHHHH
Confidence 4444444443 344599999999999999888765 3555 7889999986554
No 108
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=88.20 E-value=1.7 Score=43.94 Aligned_cols=63 Identities=22% Similarity=0.343 Sum_probs=38.5
Q ss_pred ccceEEEe-------CCCccccCcccCC-CCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccH
Q 012396 119 EANMLFLE-------TPIGVGFSYSKDA-SSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYI 185 (464)
Q Consensus 119 ~an~l~iD-------qPvGtGfSy~~~~-~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yv 185 (464)
.|-|||++ +|.|.- ||.+.. -.| .+.+++-.|+.+.|+ ++++-..=+..|+..+|-||||+.+
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgy--LtseQALADfA~ll~-~lK~~~~a~~~pvIafGGSYGGMLa 181 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGY--LTSEQALADFAELLT-FLKRDLSAEASPVIAFGGSYGGMLA 181 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhcc--ccHHHHHHHHHHHHH-HHhhccccccCcEEEecCchhhHHH
Confidence 35677776 577766 553221 123 245666667655544 5554433356799999999999544
No 109
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=88.02 E-value=0.75 Score=51.22 Aligned_cols=84 Identities=17% Similarity=0.207 Sum_probs=53.5
Q ss_pred cccceEEEeCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCC--------------CCCCCCEEEEeeccccc
Q 012396 118 REANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFP--------------QYRNRSLFITGESYAGH 183 (464)
Q Consensus 118 ~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp--------------~~~~~~~yi~GESYgG~ 183 (464)
+-.++|++|.+ |+|-|-+.-.. + .....+|..+.+ +|+...+ .+.+-++-++|.||+|.
T Consensus 278 rGYaVV~~D~R-Gtg~SeG~~~~-~----~~~E~~D~~~vI-eWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~ 350 (767)
T PRK05371 278 RGFAVVYVSGI-GTRGSDGCPTT-G----DYQEIESMKAVI-DWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGT 350 (767)
T ss_pred CCeEEEEEcCC-CCCCCCCcCcc-C----CHHHHHHHHHHH-HHHhhCCccccccccccccccCCCCCeeEEEEEcHHHH
Confidence 57899999966 99999875321 1 122233433332 2554221 12356899999999998
Q ss_pred cHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 184 YIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 184 yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
..-.+|..- .-.||.|+-..|+.+.
T Consensus 351 ~~~~aAa~~--------pp~LkAIVp~a~is~~ 375 (767)
T PRK05371 351 LPNAVATTG--------VEGLETIIPEAAISSW 375 (767)
T ss_pred HHHHHHhhC--------CCcceEEEeeCCCCcH
Confidence 776655432 2369999988877664
No 110
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=87.69 E-value=9.4 Score=37.04 Aligned_cols=32 Identities=19% Similarity=0.214 Sum_probs=30.0
Q ss_pred eEEEEEcCCcccccCCCcHHHHHHHHHHHcCC
Q 012396 427 LSFATIRGASHEAPFSQPERSLVLFKAFLDSR 458 (464)
Q Consensus 427 Ltfv~V~gAGHmvP~DqP~~al~mi~~fl~~~ 458 (464)
-|++.|-++|-++..+||....+-++-|++|.
T Consensus 275 ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~ 306 (326)
T KOG2931|consen 275 TTLLKMADCGGLVQEEQPGKLAEAFKYFLQGM 306 (326)
T ss_pred ceEEEEcccCCcccccCchHHHHHHHHHHccC
Confidence 77899999999999999999999999999985
No 111
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=85.81 E-value=2.1 Score=37.19 Aligned_cols=57 Identities=19% Similarity=0.173 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCc
Q 012396 151 ARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (464)
Q Consensus 151 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~ 213 (464)
++.+...++...+++|. .+++|+|+|.||..+-.+|.++.+... .-..+-+.+|.|-
T Consensus 11 ~~~i~~~~~~~~~~~p~---~~i~v~GHSlGg~lA~l~a~~~~~~~~---~~~~~~~~fg~p~ 67 (153)
T cd00741 11 ANLVLPLLKSALAQYPD---YKIHVTGHSLGGALAGLAGLDLRGRGL---GRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHCCC---CeEEEEEcCHHHHHHHHHHHHHHhccC---CCceEEEEeCCCc
Confidence 34444555566656664 479999999999999998888866321 1234445555544
No 112
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=85.57 E-value=3.2 Score=43.02 Aligned_cols=71 Identities=15% Similarity=0.126 Sum_probs=46.0
Q ss_pred ChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCcccccchhH
Q 012396 146 GDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFATDFNSRA 224 (464)
Q Consensus 146 ~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp~~~~~~~~ 224 (464)
+.+++-+|+..|++.+-.++....+.|+.++|-||||..+.-+-.+- +=-+.|..--++.+....++..|.
T Consensus 88 t~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~ky--------P~~~~ga~ASSapv~a~~df~~y~ 158 (434)
T PF05577_consen 88 TSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKY--------PHLFDGAWASSAPVQAKVDFWEYF 158 (434)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH---------TTT-SEEEEET--CCHCCTTTHHH
T ss_pred CHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhC--------CCeeEEEEeccceeeeecccHHHH
Confidence 66788899999999988888766778999999999997654333222 112556666666666655554443
No 113
>COG0400 Predicted esterase [General function prediction only]
Probab=85.11 E-value=3.5 Score=38.15 Aligned_cols=58 Identities=14% Similarity=0.110 Sum_probs=41.8
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccC
Q 012396 149 ITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (464)
Q Consensus 149 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~d 215 (464)
..+..+.+||....+++. ...+++++.|-|-|+.++..+.... +-.++|+++-.|..-
T Consensus 78 ~~~~~~~~~l~~~~~~~g-i~~~~ii~~GfSqGA~ial~~~l~~--------~~~~~~ail~~g~~~ 135 (207)
T COG0400 78 LETEKLAEFLEELAEEYG-IDSSRIILIGFSQGANIALSLGLTL--------PGLFAGAILFSGMLP 135 (207)
T ss_pred HHHHHHHHHHHHHHHHhC-CChhheEEEecChHHHHHHHHHHhC--------chhhccchhcCCcCC
Confidence 345666778888888773 3467899999999987766555443 236889988887753
No 114
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=84.57 E-value=2.2 Score=39.89 Aligned_cols=56 Identities=21% Similarity=0.252 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 153 DNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 153 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
+....++...+++| +.+++++|||.||-.+..+|..+.++. ...+++.+..|.|-+
T Consensus 113 ~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~---~~~~i~~~tFg~P~v 168 (229)
T cd00519 113 QVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG---PGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC---CCCceEEEEeCCCCC
Confidence 34445555666665 456999999999999988888887643 134688888888776
No 115
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=84.46 E-value=2.6 Score=38.29 Aligned_cols=62 Identities=27% Similarity=0.494 Sum_probs=43.9
Q ss_pred HhcCccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCcH
Q 012396 366 VKAGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPE 445 (464)
Q Consensus 366 L~~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~ 445 (464)
.....++++..|+.|.+.+......+.+.+ . . . ..++++.++||+...++|+
T Consensus 218 ~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~----~---------------------~--~-~~~~~~~~~gH~~~~~~p~ 269 (282)
T COG0596 218 ARITVPTLIIHGEDDPVVPAELARRLAAAL----P---------------------N--D-ARLVVIPGAGHFPHLEAPE 269 (282)
T ss_pred ccCCCCeEEEecCCCCcCCHHHHHHHHhhC----C---------------------C--C-ceEEEeCCCCCcchhhcHH
Confidence 344689999999999555554433333311 0 0 2 5678999999999999999
Q ss_pred HHHHHHHHHH
Q 012396 446 RSLVLFKAFL 455 (464)
Q Consensus 446 ~al~mi~~fl 455 (464)
...+.+..|+
T Consensus 270 ~~~~~i~~~~ 279 (282)
T COG0596 270 AFAAALLAFL 279 (282)
T ss_pred HHHHHHHHHH
Confidence 8877777754
No 116
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=83.96 E-value=15 Score=38.19 Aligned_cols=103 Identities=26% Similarity=0.351 Sum_probs=60.7
Q ss_pred EEEEecCCCCCCCCEEEEECC-CCCchhhhhhhhccCCCcccCCCcccccCCCcc--cccceEEEeC-------CCcccc
Q 012396 64 YYFAEAETDPASKPLVLWLNG-GPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWN--REANMLFLET-------PIGVGF 133 (464)
Q Consensus 64 y~f~es~~~~~~~Pl~lwlnG-GPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~--~~an~l~iDq-------PvGtGf 133 (464)
|||..+.-....-|+.|.+.| || |+.-+ ...|++++.. |- --|.|+.+|. |++.+
T Consensus 74 ~~y~n~~~~~~~gPiFLmIGGEgp-~~~~w--v~~~~~~~~~-----------~AkkfgA~v~~lEHRFYG~S~P~~~~- 138 (514)
T KOG2182|consen 74 RFYNNNQWAKPGGPIFLMIGGEGP-ESDKW--VGNENLTWLQ-----------WAKKFGATVFQLEHRFYGQSSPIGDL- 138 (514)
T ss_pred heeeccccccCCCceEEEEcCCCC-CCCCc--cccCcchHHH-----------HHHHhCCeeEEeeeeccccCCCCCCC-
Confidence 344433333456799888887 55 33222 1124444322 11 1345555554 55544
Q ss_pred CcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccH
Q 012396 134 SYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYI 185 (464)
Q Consensus 134 Sy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yv 185 (464)
|..+ - .+ .+.+++-.|+.+|+++--.+|+.-.+.|++.+|-||.|...
T Consensus 139 st~n-l-k~--LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLs 186 (514)
T KOG2182|consen 139 STSN-L-KY--LSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLS 186 (514)
T ss_pred cccc-h-hh--hhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHH
Confidence 3221 1 12 25567778888998888888876555699999999988654
No 117
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=83.44 E-value=2.1 Score=36.15 Aligned_cols=46 Identities=35% Similarity=0.575 Sum_probs=34.4
Q ss_pred HHhcCccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCccc
Q 012396 365 LVKAGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHE 438 (464)
Q Consensus 365 LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHm 438 (464)
+-...++|++.+|+.|.+++....+.+.+++. .+ -++..|.|++|+
T Consensus 100 ~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~---------------------------~~-~~~~~i~g~~H~ 145 (145)
T PF12695_consen 100 LAKIRIPVLFIHGENDPLVPPEQVRRLYEALP---------------------------GP-KELYIIPGAGHF 145 (145)
T ss_dssp HTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC---------------------------SS-EEEEEETTS-TT
T ss_pred hhccCCcEEEEEECCCCcCCHHHHHHHHHHcC---------------------------CC-cEEEEeCCCcCc
Confidence 33456899999999999999888888777541 13 567899999996
No 118
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=83.07 E-value=2.4 Score=45.18 Aligned_cols=113 Identities=19% Similarity=0.258 Sum_probs=63.8
Q ss_pred CCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccc----------cceEEEeCCCccc---cCcccCCC
Q 012396 74 ASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNRE----------ANMLFLETPIGVG---FSYSKDAS 140 (464)
Q Consensus 74 ~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~----------an~l~iDqPvGtG---fSy~~~~~ 140 (464)
+..|+++.+-||||.- ++.|.++|.+. .=|++||.- |+- .-+-.
T Consensus 640 kkYptvl~VYGGP~VQ-------------------lVnnsfkgi~ylR~~~LaslGy~Vv~IDnR-GS~hRGlkFE~--- 696 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGVQ-------------------LVNNSFKGIQYLRFCRLASLGYVVVFIDNR-GSAHRGLKFES--- 696 (867)
T ss_pred CCCceEEEEcCCCceE-------------------EeeccccceehhhhhhhhhcceEEEEEcCC-CccccchhhHH---
Confidence 4589999999999843 44677777752 347899955 431 11100
Q ss_pred CccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCcc
Q 012396 141 SYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (464)
Q Consensus 141 ~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp~ 217 (464)
.+...--...++|-++.||-...+..=..-..+-|-|-||||...-+. |.++. . -++-.+-|.|++++.
T Consensus 697 ~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~---L~~~P----~-IfrvAIAGapVT~W~ 765 (867)
T KOG2281|consen 697 HIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMG---LAQYP----N-IFRVAIAGAPVTDWR 765 (867)
T ss_pred HHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHH---hhcCc----c-eeeEEeccCcceeee
Confidence 000000111234445666655554321233468999999999765432 22211 1 256667788888773
No 119
>PF03283 PAE: Pectinacetylesterase
Probab=82.90 E-value=12 Score=37.82 Aligned_cols=141 Identities=19% Similarity=0.195 Sum_probs=75.7
Q ss_pred ceEEEEEEecCCCCCCCCEEEEECCCCCchhhh---hhhhccCCCccc-----C-C----CcccccCCCcccccceEEEe
Q 012396 60 RALFYYFAEAETDPASKPLVLWLNGGPGCSSLG---VGAFSENGPFRP-----N-G----QVLVRNEYSWNREANMLFLE 126 (464)
Q Consensus 60 ~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~---~G~f~E~GP~~~-----~-~----~~~~~n~~sW~~~an~l~iD 126 (464)
+.-.|++.+.. ....+-+||.|+||-.|-+.. .-...+.|-..- . . .....||.=+ ..|+|||=
T Consensus 35 S~~~yy~~~g~-g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~--~wN~V~vp 111 (361)
T PF03283_consen 35 SPPGYYFRPGS-GSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFY--NWNHVFVP 111 (361)
T ss_pred CCCcEEEccCC-CCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCccc--cccEEEEE
Confidence 44556666553 345689999999999998863 012234443321 1 1 1334566322 26788885
Q ss_pred CCCccccCcccCCCCccccChHH----hHHHHHHHHHHHHHH-CCCCCCCCEEEEeeccccccHHHHHHHHHHhcccccc
Q 012396 127 TPIGVGFSYSKDASSYQGVGDKI----TARDNLVFLKNWFLK-FPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEEL 201 (464)
Q Consensus 127 qPvGtGfSy~~~~~~~~~~~~~~----~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~ 201 (464)
- -+|=|+.-+...... .+.. -...+.+.|...... +++ ..++.|+|.|-||.=+..-+.++.+.-.. .
T Consensus 112 Y--C~Gd~~~G~~~~~~~-~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp~--~ 184 (361)
T PF03283_consen 112 Y--CDGDSHSGDVEPVDY-GGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLPS--S 184 (361)
T ss_pred e--cCCccccCccccccc-CCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhcc--C
Confidence 4 444444322211100 1111 122333344444555 554 35799999999999888878887763221 2
Q ss_pred ccceeeecC
Q 012396 202 FNLKGIALG 210 (464)
Q Consensus 202 inLkGi~IG 210 (464)
.+++++.=.
T Consensus 185 ~~v~~~~Ds 193 (361)
T PF03283_consen 185 VKVKCLSDS 193 (361)
T ss_pred ceEEEeccc
Confidence 445544433
No 120
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=82.88 E-value=7.2 Score=46.31 Aligned_cols=102 Identities=12% Similarity=0.113 Sum_probs=64.3
Q ss_pred CCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHhHHHHH
Q 012396 76 KPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNL 155 (464)
Q Consensus 76 ~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~ 155 (464)
.|-++.++|++|.+..+ ..+.+ .......++-+|.| |.|-+. . ..+ +-++.|+++.
T Consensus 1068 ~~~l~~lh~~~g~~~~~-~~l~~----------------~l~~~~~v~~~~~~-g~~~~~--~-~~~---~l~~la~~~~ 1123 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQF-SVLSR----------------YLDPQWSIYGIQSP-RPDGPM--Q-TAT---SLDEVCEAHL 1123 (1296)
T ss_pred CCCeEEecCCCCchHHH-HHHHH----------------hcCCCCcEEEEECC-CCCCCC--C-CCC---CHHHHHHHHH
Confidence 46688999999877765 22211 11234678889998 776442 1 111 3455666666
Q ss_pred HHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCC
Q 012396 156 VFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNP 212 (464)
Q Consensus 156 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng 212 (464)
+.++. ..| ..++.|+|+|+||.-+-.+|.++.+.. ..+..+++.++
T Consensus 1124 ~~i~~---~~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~-----~~v~~l~l~~~ 1169 (1296)
T PRK10252 1124 ATLLE---QQP---HGPYHLLGYSLGGTLAQGIAARLRARG-----EEVAFLGLLDT 1169 (1296)
T ss_pred HHHHh---hCC---CCCEEEEEechhhHHHHHHHHHHHHcC-----CceeEEEEecC
Confidence 55553 122 358999999999999999998876532 24556665554
No 121
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=82.82 E-value=3.4 Score=40.89 Aligned_cols=92 Identities=18% Similarity=0.234 Sum_probs=55.7
Q ss_pred CCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcc-----cccceEEEeCCCccccCcccCCCCccccC
Q 012396 72 DPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWN-----REANMLFLETPIGVGFSYSKDASSYQGVG 146 (464)
Q Consensus 72 ~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~-----~~an~l~iDqPvGtGfSy~~~~~~~~~~~ 146 (464)
+.+++-.+|+.||--+|=-.. .++. .....|. ..+||+..--| |||+|.+..+
T Consensus 133 ~a~~~RWiL~s~GNg~~~E~~-~~~~-------------~~~~~~~~~ak~~~aNvl~fNYp-GVg~S~G~~s------- 190 (365)
T PF05677_consen 133 EAKPQRWILVSNGNGECYENR-AMLD-------------YKDDWIQRFAKELGANVLVFNYP-GVGSSTGPPS------- 190 (365)
T ss_pred CCCCCcEEEEEcCChHHhhhh-hhhc-------------cccHHHHHHHHHcCCcEEEECCC-ccccCCCCCC-------
Confidence 567788999999765543331 1110 1112233 46899999988 9999976442
Q ss_pred hHHhHHHHHHHHHHHHHHCC-CCCCCCEEEEeeccccccHH
Q 012396 147 DKITARDNLVFLKNWFLKFP-QYRNRSLFITGESYAGHYIP 186 (464)
Q Consensus 147 ~~~~a~~~~~fL~~f~~~fp-~~~~~~~yi~GESYgG~yvP 186 (464)
-++-+++. .++-+++...+ .-+.+.+.+.|+|-||--..
T Consensus 191 ~~dLv~~~-~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa 230 (365)
T PF05677_consen 191 RKDLVKDY-QACVRYLRDEEQGPKAKNIILYGHSLGGGVQA 230 (365)
T ss_pred HHHHHHHH-HHHHHHHHhcccCCChheEEEeeccccHHHHH
Confidence 12333333 33444444432 33567899999999987544
No 122
>COG0400 Predicted esterase [General function prediction only]
Probab=82.77 E-value=2.5 Score=39.12 Aligned_cols=60 Identities=25% Similarity=0.414 Sum_probs=45.2
Q ss_pred cCccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCcHHH
Q 012396 368 AGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERS 447 (464)
Q Consensus 368 ~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~~a 447 (464)
.+.||++.+|..|.+||..-+++..+-++. .+. + ..+..+. .||.++. +.
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~-~g~-----------------------~-v~~~~~~-~GH~i~~----e~ 194 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTA-SGA-----------------------D-VEVRWHE-GGHEIPP----EE 194 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHH-cCC-----------------------C-EEEEEec-CCCcCCH----HH
Confidence 478999999999999999999999887753 121 3 6566666 9999974 55
Q ss_pred HHHHHHHHcC
Q 012396 448 LVLFKAFLDS 457 (464)
Q Consensus 448 l~mi~~fl~~ 457 (464)
++.+++|+.+
T Consensus 195 ~~~~~~wl~~ 204 (207)
T COG0400 195 LEAARSWLAN 204 (207)
T ss_pred HHHHHHHHHh
Confidence 5666667754
No 123
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.59 E-value=7.6 Score=36.78 Aligned_cols=32 Identities=16% Similarity=0.037 Sum_probs=22.2
Q ss_pred HHHHHHHHhc-CccEEEEEcCCCcccCchhHHH
Q 012396 359 ITIVGKLVKA-GIPVMVYSGDQDSVIPLTGSRK 390 (464)
Q Consensus 359 ~~~l~~LL~~-~irVLiy~Gd~D~i~n~~g~~~ 390 (464)
+..-.++++. ...+-+|.|-.|.=||..-...
T Consensus 231 ~~~d~e~~een~d~l~Fyygt~DgW~p~~~~d~ 263 (301)
T KOG3975|consen 231 TTRDIEYCEENLDSLWFYYGTNDGWVPSHYYDY 263 (301)
T ss_pred HHhHHHHHHhcCcEEEEEccCCCCCcchHHHHH
Confidence 3344455554 6789999999999999544433
No 124
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=81.85 E-value=1.7 Score=41.89 Aligned_cols=85 Identities=20% Similarity=0.145 Sum_probs=55.4
Q ss_pred cccceEEEeCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhcc
Q 012396 118 REANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNK 197 (464)
Q Consensus 118 ~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~ 197 (464)
+-..+|..|.- |+|-|.+.-... ....++|.++.+ +|+..-|.- +-++-++|.||+|......|..-
T Consensus 56 ~GY~vV~~D~R-G~g~S~G~~~~~-----~~~e~~D~~d~I-~W~~~Qpws-~G~VGm~G~SY~G~~q~~~A~~~----- 122 (272)
T PF02129_consen 56 RGYAVVVQDVR-GTGGSEGEFDPM-----SPNEAQDGYDTI-EWIAAQPWS-NGKVGMYGISYGGFTQWAAAARR----- 122 (272)
T ss_dssp TT-EEEEEE-T-TSTTS-S-B-TT-----SHHHHHHHHHHH-HHHHHCTTE-EEEEEEEEETHHHHHHHHHHTTT-----
T ss_pred CCCEEEEECCc-ccccCCCccccC-----ChhHHHHHHHHH-HHHHhCCCC-CCeEEeeccCHHHHHHHHHHhcC-----
Confidence 46789999955 999998754321 234555655443 466666654 45799999999999877776521
Q ss_pred ccccccceeeecCCCccCccc
Q 012396 198 KEELFNLKGIALGNPVLEFAT 218 (464)
Q Consensus 198 ~~~~inLkGi~IGng~~dp~~ 218 (464)
+-.||.|+...+..|...
T Consensus 123 ---~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 123 ---PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp ----TTEEEEEEESE-SBTCC
T ss_pred ---CCCceEEEecccCCcccc
Confidence 346999999888877644
No 125
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=81.35 E-value=4.4 Score=38.46 Aligned_cols=107 Identities=19% Similarity=0.258 Sum_probs=63.2
Q ss_pred CCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHhHHHH
Q 012396 75 SKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDN 154 (464)
Q Consensus 75 ~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~ 154 (464)
..+.+|+.+|-=.--+..+-+|. +.|=.=..|++=.|-- |-|.|-++.... +.-...+..
T Consensus 59 ~~~~lly~hGNa~Dlgq~~~~~~---------------~l~~~ln~nv~~~DYS-GyG~S~G~psE~----n~y~Di~av 118 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLGQMVELFK---------------ELSIFLNCNVVSYDYS-GYGRSSGKPSER----NLYADIKAV 118 (258)
T ss_pred cceEEEEcCCcccchHHHHHHHH---------------HHhhcccceEEEEecc-cccccCCCcccc----cchhhHHHH
Confidence 45999999986111111112332 2222234577778866 999998865432 333344455
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 155 LVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 155 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
+++|++ ++ . +..++.|+|.|.|.. | +-.+.- .-.+.|+++-+|+++-
T Consensus 119 ye~Lr~---~~-g-~~~~Iil~G~SiGt~--~--tv~Las------r~~~~alVL~SPf~S~ 165 (258)
T KOG1552|consen 119 YEWLRN---RY-G-SPERIILYGQSIGTV--P--TVDLAS------RYPLAAVVLHSPFTSG 165 (258)
T ss_pred HHHHHh---hc-C-CCceEEEEEecCCch--h--hhhHhh------cCCcceEEEeccchhh
Confidence 666654 22 1 467899999999965 3 112221 1139999999998755
No 126
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=80.97 E-value=3.5 Score=39.73 Aligned_cols=37 Identities=22% Similarity=0.285 Sum_probs=30.2
Q ss_pred HHhHHHHHHHHHHHHHHCCCCCCCCEEEEeecccccc
Q 012396 148 KITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHY 184 (464)
Q Consensus 148 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~y 184 (464)
.++|+.+++.+..-....|+=..-++|++|||-|..=
T Consensus 86 ~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g 122 (289)
T PF10081_consen 86 REAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYG 122 (289)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccc
Confidence 4567888888888888898877778999999997543
No 127
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=80.94 E-value=2.7 Score=38.96 Aligned_cols=56 Identities=14% Similarity=-0.052 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCcc
Q 012396 152 RDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (464)
Q Consensus 152 ~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp~ 217 (464)
+.+.+++....+.. ...++++|.|-|-||..+-.++.+. +-.+.|++.-+|++-+.
T Consensus 88 ~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~~--------p~~~~gvv~lsG~~~~~ 143 (216)
T PF02230_consen 88 ERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALRY--------PEPLAGVVALSGYLPPE 143 (216)
T ss_dssp HHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHCT--------SSTSSEEEEES---TTG
T ss_pred HHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHHc--------CcCcCEEEEeecccccc
Confidence 33344444444332 4567899999999998776666432 23789999999987543
No 128
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=79.99 E-value=6.1 Score=40.69 Aligned_cols=36 Identities=11% Similarity=0.075 Sum_probs=25.6
Q ss_pred CCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 171 RSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 171 ~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
....|+|.||||.-+-.+|.+--+ .+.+++..+|.+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd--------~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPE--------RFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcc--------cccEEEEeccce
Confidence 468999999999877666654322 467777777754
No 129
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=79.03 E-value=14 Score=35.66 Aligned_cols=102 Identities=23% Similarity=0.280 Sum_probs=64.9
Q ss_pred CCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCccccc--ceEEEeCCCccccCcccCCCCccccChHHhH
Q 012396 74 ASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREA--NMLFLETPIGVGFSYSKDASSYQGVGDKITA 151 (464)
Q Consensus 74 ~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~a--n~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a 151 (464)
....+||=++|-||+-==+ +.--++...+ -+|=|--| |-|++-......+. + +
T Consensus 33 s~~gTVv~~hGsPGSH~DF------------------kYi~~~l~~~~iR~I~iN~P-Gf~~t~~~~~~~~~--n-~--- 87 (297)
T PF06342_consen 33 SPLGTVVAFHGSPGSHNDF------------------KYIRPPLDEAGIRFIGINYP-GFGFTPGYPDQQYT--N-E--- 87 (297)
T ss_pred CCceeEEEecCCCCCccch------------------hhhhhHHHHcCeEEEEeCCC-CCCCCCCCcccccC--h-H---
Confidence 3456899999999965322 1111223223 34556778 88888765544442 2 2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCc
Q 012396 152 RDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (464)
Q Consensus 152 ~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~ 213 (464)
+-..|.++++... +.+ ..+.+.|+|-|+--+-.+|... ++.|+++.||.
T Consensus 88 -er~~~~~~ll~~l-~i~-~~~i~~gHSrGcenal~la~~~----------~~~g~~lin~~ 136 (297)
T PF06342_consen 88 -ERQNFVNALLDEL-GIK-GKLIFLGHSRGCENALQLAVTH----------PLHGLVLINPP 136 (297)
T ss_pred -HHHHHHHHHHHHc-CCC-CceEEEEeccchHHHHHHHhcC----------ccceEEEecCC
Confidence 2345778888876 344 5788889999997666665443 46788888865
No 130
>PLN02571 triacylglycerol lipase
Probab=78.02 E-value=5.6 Score=40.69 Aligned_cols=66 Identities=14% Similarity=0.113 Sum_probs=47.9
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHh--ccc----cccccceeeecCCCccC
Q 012396 149 ITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEF--NKK----EELFNLKGIALGNPVLE 215 (464)
Q Consensus 149 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~--n~~----~~~inLkGi~IGng~~d 215 (464)
.+.++++..|+.+.+++|.. ..+++|+|||.||..+-..|..|... |.. ...+++..+..|.|-+.
T Consensus 205 Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVG 276 (413)
T PLN02571 205 SARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVG 276 (413)
T ss_pred hHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCcc
Confidence 34567888899999888765 34799999999999998888888652 111 01345677777777663
No 131
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=77.41 E-value=4.5 Score=36.80 Aligned_cols=63 Identities=13% Similarity=0.250 Sum_probs=50.2
Q ss_pred ChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccC
Q 012396 146 GDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (464)
Q Consensus 146 ~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~d 215 (464)
+.+++|.|+-..++.+.++. +.+++.|+|-|+|.--+|.+..+|-..-+. +++++.+..+-..
T Consensus 46 tP~~~a~Dl~~~i~~y~~~w---~~~~vvLiGYSFGADvlP~~~nrLp~~~r~----~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 46 TPEQTAADLARIIRHYRARW---GRKRVVLIGYSFGADVLPFIYNRLPAALRA----RVAQVVLLSPSTT 108 (192)
T ss_pred CHHHHHHHHHHHHHHHHHHh---CCceEEEEeecCCchhHHHHHhhCCHHHHh----heeEEEEeccCCc
Confidence 56889999988888888765 567899999999999999999998764333 5778877765543
No 132
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=76.86 E-value=4.5 Score=37.34 Aligned_cols=41 Identities=12% Similarity=0.207 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHH
Q 012396 150 TARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLM 192 (464)
Q Consensus 150 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i 192 (464)
+-.|+..+.+.|++.+++ +|||+|+|||=|+..+-.+.+..
T Consensus 76 ay~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hHHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHHHHHH
Confidence 346777888999998874 89999999999987665554443
No 133
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=76.41 E-value=3.8 Score=41.91 Aligned_cols=51 Identities=14% Similarity=-0.005 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEE-EEeeccccccHHHHHHHHHHhccccccccceeeecCCCc
Q 012396 152 RDNLVFLKNWFLKFPQYRNRSLF-ITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (464)
Q Consensus 152 ~~~~~fL~~f~~~fp~~~~~~~y-i~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~ 213 (464)
+|+.+.+..+++.. .-+++. |+|+|+||.-+-.+|.+--+ .++++++.++.
T Consensus 144 ~d~~~~~~~ll~~l---gi~~~~~vvG~SmGG~ial~~a~~~P~--------~v~~lv~ia~~ 195 (389)
T PRK06765 144 LDFVRVQKELIKSL---GIARLHAVMGPSMGGMQAQEWAVHYPH--------MVERMIGVIGN 195 (389)
T ss_pred HHHHHHHHHHHHHc---CCCCceEEEEECHHHHHHHHHHHHChH--------hhheEEEEecC
Confidence 34444445555443 334565 99999999988888766533 47777776543
No 134
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=75.98 E-value=5.6 Score=41.32 Aligned_cols=56 Identities=14% Similarity=0.145 Sum_probs=37.1
Q ss_pred eCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHH
Q 012396 126 ETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADL 191 (464)
Q Consensus 126 DqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~ 191 (464)
|.+ |.||+.-... ..+...+++-+.+++.++..+ .+++.|+|||+||..+-.++..
T Consensus 127 dL~-g~gYDwR~~~------~~~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 127 TLF-GFGYDFRQSN------RLPETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred Ccc-cCCCCccccc------cHHHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHHH
Confidence 444 6776654211 123345677777777777653 5689999999999877766643
No 135
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=75.66 E-value=13 Score=33.10 Aligned_cols=77 Identities=13% Similarity=0.103 Sum_probs=47.0
Q ss_pred cccceEEEeCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhcc
Q 012396 118 REANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNK 197 (464)
Q Consensus 118 ~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~ 197 (464)
...+++-+|.| |.|.+-... . +.+..++.....+. ...+ ..++.++|+|+||..+-.+|..+..+.
T Consensus 24 ~~~~v~~~~~~-g~~~~~~~~-----~-~~~~~~~~~~~~l~---~~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~- 89 (212)
T smart00824 24 GRRDVSALPLP-GFGPGEPLP-----A-SADALVEAQAEAVL---RAAG---GRPFVLVGHSSGGLLAHAVAARLEARG- 89 (212)
T ss_pred CCccEEEecCC-CCCCCCCCC-----C-CHHHHHHHHHHHHH---HhcC---CCCeEEEEECHHHHHHHHHHHHHHhCC-
Confidence 34678899988 766443211 1 22333444433333 2232 468999999999999999998887532
Q ss_pred ccccccceeeecCCC
Q 012396 198 KEELFNLKGIALGNP 212 (464)
Q Consensus 198 ~~~~inLkGi~IGng 212 (464)
..++++++.+.
T Consensus 90 ----~~~~~l~~~~~ 100 (212)
T smart00824 90 ----IPPAAVVLLDT 100 (212)
T ss_pred ----CCCcEEEEEcc
Confidence 23566655543
No 136
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=75.43 E-value=3.9 Score=38.80 Aligned_cols=59 Identities=20% Similarity=0.365 Sum_probs=44.4
Q ss_pred ccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCcHHHHH
Q 012396 370 IPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLV 449 (464)
Q Consensus 370 irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~~al~ 449 (464)
.+|||++|..|-++|+.-..+..+..+ +......|+||||--..--| +-++
T Consensus 193 ~PVLiiHgtdDevv~~sHg~~Lye~~k----------------------------~~~epl~v~g~gH~~~~~~~-~yi~ 243 (258)
T KOG1552|consen 193 CPVLIIHGTDDEVVDFSHGKALYERCK----------------------------EKVEPLWVKGAGHNDIELYP-EYIE 243 (258)
T ss_pred CCEEEEecccCceecccccHHHHHhcc----------------------------ccCCCcEEecCCCcccccCH-HHHH
Confidence 599999999999999998887776321 11344789999999877666 4566
Q ss_pred HHHHHHcC
Q 012396 450 LFKAFLDS 457 (464)
Q Consensus 450 mi~~fl~~ 457 (464)
.+++|+..
T Consensus 244 ~l~~f~~~ 251 (258)
T KOG1552|consen 244 HLRRFISS 251 (258)
T ss_pred HHHHHHHH
Confidence 66667754
No 137
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=74.68 E-value=31 Score=34.19 Aligned_cols=124 Identities=25% Similarity=0.366 Sum_probs=67.8
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCCchhhh--hhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcc
Q 012396 59 QRALFYYFAEAETDPASKPLVLWLNGGPGCSSLG--VGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYS 136 (464)
Q Consensus 59 ~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~--~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~ 136 (464)
+--.+.|... ......|++|-++|==|.|.-. .|+. ..+... .| .++-.+-- |-|.+-.
T Consensus 60 ~~~~ldw~~~--p~~~~~P~vVl~HGL~G~s~s~y~r~L~----------~~~~~r--g~----~~Vv~~~R-gcs~~~n 120 (345)
T COG0429 60 GFIDLDWSED--PRAAKKPLVVLFHGLEGSSNSPYARGLM----------RALSRR--GW----LVVVFHFR-GCSGEAN 120 (345)
T ss_pred CEEEEeeccC--ccccCCceEEEEeccCCCCcCHHHHHHH----------HHHHhc--CC----eEEEEecc-cccCCcc
Confidence 3445556553 1234569999999966655431 1221 011111 13 45556644 7776655
Q ss_pred cCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCc
Q 012396 137 KDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (464)
Q Consensus 137 ~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~ 213 (464)
....-|.. .+. +|+..||..-.+++| .+++|.+|-|.||. .+|.++.+.-+. .....++++-+|+
T Consensus 121 ~~p~~yh~-G~t---~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg~d--~~~~aa~~vs~P~ 185 (345)
T COG0429 121 TSPRLYHS-GET---EDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEGDD--LPLDAAVAVSAPF 185 (345)
T ss_pred cCcceecc-cch---hHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhccC--cccceeeeeeCHH
Confidence 44433321 232 355555554445565 67999999999985 567777664322 2335566665554
No 138
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=74.66 E-value=8.2 Score=40.09 Aligned_cols=32 Identities=19% Similarity=0.213 Sum_probs=23.3
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeeccccccHHH
Q 012396 155 LVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQ 187 (464)
Q Consensus 155 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~ 187 (464)
++++++....|-.= ..++-|+|||-|++-+-.
T Consensus 165 LkWV~~NIe~FGGD-p~NVTl~GeSAGa~si~~ 196 (491)
T COG2272 165 LKWVRDNIEAFGGD-PQNVTLFGESAGAASILT 196 (491)
T ss_pred HHHHHHHHHHhCCC-ccceEEeeccchHHHHHH
Confidence 45777788888543 457999999999875543
No 139
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=74.58 E-value=13 Score=35.13 Aligned_cols=59 Identities=15% Similarity=0.241 Sum_probs=46.5
Q ss_pred CccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCcHHHH
Q 012396 369 GIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSL 448 (464)
Q Consensus 369 ~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~~al 448 (464)
..+|.++.|+.|.+|...-...|-+..+ +. +++- +-..|||-+..|.++++
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t~---------------------------~~-f~l~-~fdGgHFfl~~~~~~v~ 226 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHTK---------------------------GD-FTLR-VFDGGHFFLNQQREEVL 226 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhhc---------------------------CC-ceEE-EecCcceehhhhHHHHH
Confidence 4799999999999999888777766221 12 5554 44579999999999999
Q ss_pred HHHHHHHc
Q 012396 449 VLFKAFLD 456 (464)
Q Consensus 449 ~mi~~fl~ 456 (464)
..+.+.+.
T Consensus 227 ~~i~~~l~ 234 (244)
T COG3208 227 ARLEQHLA 234 (244)
T ss_pred HHHHHHhh
Confidence 99998884
No 140
>PLN02753 triacylglycerol lipase
Probab=72.20 E-value=9.1 Score=40.24 Aligned_cols=68 Identities=18% Similarity=0.179 Sum_probs=48.2
Q ss_pred HHhHHHHHHHHHHHHHHCCC--CCCCCEEEEeeccccccHHHHHHHHHHh--ccc--cccccceeeecCCCccC
Q 012396 148 KITARDNLVFLKNWFLKFPQ--YRNRSLFITGESYAGHYIPQLADLMLEF--NKK--EELFNLKGIALGNPVLE 215 (464)
Q Consensus 148 ~~~a~~~~~fL~~f~~~fp~--~~~~~~yi~GESYgG~yvP~~a~~i~~~--n~~--~~~inLkGi~IGng~~d 215 (464)
..+.++++..++.....+|. .....++|+|||.||..+-..|..|... |+. ...+++.-+..|.|-+.
T Consensus 287 ~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVG 360 (531)
T PLN02753 287 FSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVG 360 (531)
T ss_pred hhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCcc
Confidence 44667888899998888864 2345799999999999999999888753 111 11345666666766553
No 141
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=71.45 E-value=8.6 Score=39.67 Aligned_cols=57 Identities=14% Similarity=0.168 Sum_probs=44.4
Q ss_pred CccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCcHHHH
Q 012396 369 GIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSL 448 (464)
Q Consensus 369 ~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~~al 448 (464)
.++||+.+|..|.++|....+.+.+.. .+ ..++.+.++ |+ .++|+.++
T Consensus 355 ~~PvLiI~G~~D~ivP~~~a~~l~~~~----------------------------~~-~~l~~i~~~-~~--~e~~~~~~ 402 (414)
T PRK05077 355 PTPMLSGYWKNDPFSPEEDSRLIASSS----------------------------AD-GKLLEIPFK-PV--YRNFDKAL 402 (414)
T ss_pred CCcEEEEecCCCCCCCHHHHHHHHHhC----------------------------CC-CeEEEccCC-Cc--cCCHHHHH
Confidence 479999999999999999998665421 13 455778876 33 35999999
Q ss_pred HHHHHHHcC
Q 012396 449 VLFKAFLDS 457 (464)
Q Consensus 449 ~mi~~fl~~ 457 (464)
..+.+||..
T Consensus 403 ~~i~~wL~~ 411 (414)
T PRK05077 403 QEISDWLED 411 (414)
T ss_pred HHHHHHHHH
Confidence 999999964
No 142
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=71.24 E-value=1.4 Score=44.02 Aligned_cols=102 Identities=17% Similarity=0.266 Sum_probs=56.4
Q ss_pred CCCCEEEEECCCCCch--hhhhhhhccCCCcccCCCcccccCCCcc-cccceEEEeCCCccccCcccCCCCccccChHHh
Q 012396 74 ASKPLVLWLNGGPGCS--SLGVGAFSENGPFRPNGQVLVRNEYSWN-REANMLFLETPIGVGFSYSKDASSYQGVGDKIT 150 (464)
Q Consensus 74 ~~~Pl~lwlnGGPG~S--s~~~G~f~E~GP~~~~~~~~~~n~~sW~-~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~ 150 (464)
.++|++|.++|=-+.. ..++ ..+..+-.... ...|||.||--.+..-.|... ..+...+
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~-------------~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a-----~~n~~~v 130 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWI-------------QDMIKALLQKDTGDYNVIVVDWSRGASNNYPQA-----VANTRLV 130 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHH-------------HHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHH-----HHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHH-------------HHHHHHHHhhccCCceEEEEcchhhccccccch-----hhhHHHH
Confidence 5799999999832222 1210 01222222332 468999999766655444321 1133455
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHH
Q 012396 151 ARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLE 194 (464)
Q Consensus 151 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~ 194 (464)
++.+-.||+...... .+...+++|+|+|.|+|-+-.+++++..
T Consensus 131 g~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 131 GRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp HHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 666666776666443 2345689999999999988777777654
No 143
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=71.16 E-value=3.5 Score=37.87 Aligned_cols=74 Identities=15% Similarity=0.055 Sum_probs=53.2
Q ss_pred CccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeee
Q 012396 129 IGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIA 208 (464)
Q Consensus 129 vGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~ 208 (464)
+-+||-+++... +-+++..++.++++--++.+|.-+ .+-+.|+|-|.|.+..+..++.+ -.+.|++
T Consensus 101 asvgY~l~~q~h-----tL~qt~~~~~~gv~filk~~~n~k--~l~~gGHSaGAHLa~qav~R~r~-------prI~gl~ 166 (270)
T KOG4627|consen 101 ASVGYNLCPQVH-----TLEQTMTQFTHGVNFILKYTENTK--VLTFGGHSAGAHLAAQAVMRQRS-------PRIWGLI 166 (270)
T ss_pred EEeccCcCcccc-----cHHHHHHHHHHHHHHHHHhcccce--eEEEcccchHHHHHHHHHHHhcC-------chHHHHH
Confidence 467777765432 446777788889888888887543 59999999999888777776532 2577888
Q ss_pred cCCCccCc
Q 012396 209 LGNPVLEF 216 (464)
Q Consensus 209 IGng~~dp 216 (464)
+-.|+-+-
T Consensus 167 l~~GvY~l 174 (270)
T KOG4627|consen 167 LLCGVYDL 174 (270)
T ss_pred HHhhHhhH
Confidence 87777543
No 144
>PRK04940 hypothetical protein; Provisional
Probab=71.00 E-value=7.2 Score=35.19 Aligned_cols=38 Identities=18% Similarity=0.255 Sum_probs=30.6
Q ss_pred CCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCcccc
Q 012396 171 RSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFATD 219 (464)
Q Consensus 171 ~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp~~~ 219 (464)
.++.|+|-|-||.|+..+|.+. .++ -++.||.+.|...
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~----------g~~-aVLiNPAv~P~~~ 97 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC----------GIR-QVIFNPNLFPEEN 97 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH----------CCC-EEEECCCCChHHH
Confidence 4689999999999999998774 355 4578999999544
No 145
>PLN02719 triacylglycerol lipase
Probab=70.41 E-value=10 Score=39.78 Aligned_cols=66 Identities=18% Similarity=0.249 Sum_probs=46.9
Q ss_pred HhHHHHHHHHHHHHHHCCCC--CCCCEEEEeeccccccHHHHHHHHHHh--ccc--cccccceeeecCCCcc
Q 012396 149 ITARDNLVFLKNWFLKFPQY--RNRSLFITGESYAGHYIPQLADLMLEF--NKK--EELFNLKGIALGNPVL 214 (464)
Q Consensus 149 ~~a~~~~~fL~~f~~~fp~~--~~~~~yi~GESYgG~yvP~~a~~i~~~--n~~--~~~inLkGi~IGng~~ 214 (464)
.+.++++..++...+.+|.. ....++|+|||.||..+-..|..|.+. |+. ...+++.-+..|.|=+
T Consensus 274 SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRV 345 (518)
T PLN02719 274 SAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRV 345 (518)
T ss_pred hHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCc
Confidence 35567888899988888864 334799999999999999999888763 111 1124455566666654
No 146
>COG0627 Predicted esterase [General function prediction only]
Probab=69.82 E-value=24 Score=34.95 Aligned_cols=127 Identities=20% Similarity=0.197 Sum_probs=69.1
Q ss_pred CCCEEEEECCCCCchhhhhhhhccCCCcccC-C--C--cccccCCCcccccceEEEeCCCccccCc-ccCCCCccccChH
Q 012396 75 SKPLVLWLNGGPGCSSLGVGAFSENGPFRPN-G--Q--VLVRNEYSWNREANMLFLETPIGVGFSY-SKDASSYQGVGDK 148 (464)
Q Consensus 75 ~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~-~--~--~~~~n~~sW~~~an~l~iDqPvGtGfSy-~~~~~~~~~~~~~ 148 (464)
.+.-|+|+.+|..|..- .+.+.++.+-. + + ...+.-.-+....++--|+ |+|.|.|+ ++...... ...
T Consensus 52 ~~ipV~~~l~G~t~~~~---~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~--~~~ 125 (316)
T COG0627 52 RDIPVLYLLSGLTCNEP---NVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPW--ASG 125 (316)
T ss_pred CCCCEEEEeCCCCCCCC---ceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCcc--ccC
Confidence 34445555668888741 22333444332 1 1 1222233355555566666 69999995 33221100 000
Q ss_pred HhHHHHHHHHH-----HHHHHCCCCCC-CCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCcc
Q 012396 149 ITARDNLVFLK-----NWFLKFPQYRN-RSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (464)
Q Consensus 149 ~~a~~~~~fL~-----~f~~~fp~~~~-~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp~ 217 (464)
..+++.||. .+.+.||--+. ..-.|+|+|+||+=+-.+|.+-.+ .++.++--+|+++|.
T Consensus 126 --~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd--------~f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 --PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPD--------RFKSASSFSGILSPS 190 (316)
T ss_pred --ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcc--------hhceecccccccccc
Confidence 134444543 46667774432 256899999999977776655322 366667677777775
No 147
>COG4425 Predicted membrane protein [Function unknown]
Probab=69.76 E-value=9.6 Score=39.00 Aligned_cols=36 Identities=19% Similarity=0.355 Sum_probs=30.8
Q ss_pred HHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccc
Q 012396 148 KITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGH 183 (464)
Q Consensus 148 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~ 183 (464)
.++|+.+++++-....+.|+=+.-++|+.|||-|..
T Consensus 374 ~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 374 ADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred hhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 467888899888888999998888899999999843
No 148
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=69.56 E-value=14 Score=36.76 Aligned_cols=46 Identities=22% Similarity=0.330 Sum_probs=34.4
Q ss_pred HHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 160 NWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 160 ~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
.|+...|+.-.+.+.++|+|-||...-.+|. +.+ .+++++...|++
T Consensus 164 d~l~slpevD~~rI~v~G~SqGG~lal~~aa-Ld~--------rv~~~~~~vP~l 209 (320)
T PF05448_consen 164 DFLRSLPEVDGKRIGVTGGSQGGGLALAAAA-LDP--------RVKAAAADVPFL 209 (320)
T ss_dssp HHHHTSTTEEEEEEEEEEETHHHHHHHHHHH-HSS--------T-SEEEEESESS
T ss_pred HHHHhCCCcCcceEEEEeecCchHHHHHHHH-hCc--------cccEEEecCCCc
Confidence 4778899998889999999999987766554 422 477777777664
No 149
>PLN02408 phospholipase A1
Probab=69.39 E-value=12 Score=37.78 Aligned_cols=63 Identities=17% Similarity=0.059 Sum_probs=43.7
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 149 ITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 149 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
...+++.+.++...+.+|.. ...++|+|||.||..+-..|..|...... ...+.-+..|.|-+
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~~~~--~~~V~v~tFGsPRV 241 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTTFKR--APMVTVISFGGPRV 241 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHhcCC--CCceEEEEcCCCCc
Confidence 34567778888888888864 34699999999999998888888763111 11244455555544
No 150
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=68.97 E-value=9.3 Score=35.83 Aligned_cols=36 Identities=28% Similarity=0.444 Sum_probs=28.6
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHH
Q 012396 155 LVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLE 194 (464)
Q Consensus 155 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~ 194 (464)
.++++...+.+++ +++|+|||=||..+-+.|..+.+
T Consensus 72 ~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~ 107 (224)
T PF11187_consen 72 LAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDD 107 (224)
T ss_pred HHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccH
Confidence 4566777776654 59999999999999998888655
No 151
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=68.97 E-value=6.5 Score=39.95 Aligned_cols=61 Identities=16% Similarity=0.135 Sum_probs=43.8
Q ss_pred HHhHHHHHHHHHHHHHHCCCCCC-CCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 148 KITARDNLVFLKNWFLKFPQYRN-RSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 148 ~~~a~~~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
-..|.|...+|..-.+.||.+.. .|+.+.|.||||. ...++.+|. +-.+.||+=-++|.-|
T Consensus 160 IMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~y-la~l~~k~a-------P~~~~~~iDns~~~~p 221 (403)
T PF11144_consen 160 IMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGY-LAHLCAKIA-------PWLFDGVIDNSSYALP 221 (403)
T ss_pred HHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHH-HHHHHHhhC-------ccceeEEEecCccccc
Confidence 35788999999999999999985 7999999999975 445555552 2345666555555544
No 152
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=68.64 E-value=20 Score=33.61 Aligned_cols=86 Identities=10% Similarity=0.061 Sum_probs=52.4
Q ss_pred ceEEEeCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccc
Q 012396 121 NMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEE 200 (464)
Q Consensus 121 n~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~ 200 (464)
+...|+-|.+.+-=.+-....+.. +-++.++.+.+++.++.. ..+++.|+|.|-|+.-+-...+++.+.....
T Consensus 4 ~~~~V~YPa~f~P~~g~~~~t~~~-Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~- 76 (225)
T PF08237_consen 4 NVVAVDYPASFWPVTGIGSPTYDE-SVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDPP- 76 (225)
T ss_pred ceEEecCCchhcCcCCCCCCccch-HHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCC-
Confidence 455667676433211111112211 334455666677776655 5789999999999887777777776632211
Q ss_pred cccceeeecCCCc
Q 012396 201 LFNLKGIALGNPV 213 (464)
Q Consensus 201 ~inLkGi~IGng~ 213 (464)
.-++.-+.+|||-
T Consensus 77 ~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 77 PDDLSFVLIGNPR 89 (225)
T ss_pred cCceEEEEecCCC
Confidence 2478899999974
No 153
>PLN02802 triacylglycerol lipase
Probab=68.61 E-value=11 Score=39.51 Aligned_cols=62 Identities=15% Similarity=0.142 Sum_probs=43.1
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 150 TARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 150 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
+.++++.-++.+.+++|.- ...++|+|||.||-.+-..|..|...... .+.+..+..|.|-+
T Consensus 310 ~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~~--~~pV~vyTFGsPRV 371 (509)
T PLN02802 310 LSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVPA--APPVAVFSFGGPRV 371 (509)
T ss_pred HHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCCC--CCceEEEEcCCCCc
Confidence 4567777888888887643 24699999999999998888888653211 22445566666554
No 154
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=67.20 E-value=34 Score=32.01 Aligned_cols=122 Identities=16% Similarity=0.092 Sum_probs=58.0
Q ss_pred CCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHhHHHH
Q 012396 75 SKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDN 154 (464)
Q Consensus 75 ~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~ 154 (464)
+...||++.|--|+....-.+-.+. . .+. ....+....++.-+|-+- -+|.-.. . .-...++.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~-----~-~~~--~~~~~~~~~d~ft~df~~--~~s~~~g-~-----~l~~q~~~~ 66 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASEL-----Q-RKA--LLNDNSSHFDFFTVDFNE--ELSAFHG-R-----TLQRQAEFL 66 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHH-----h-hhh--hhccCccceeEEEeccCc--ccccccc-c-----cHHHHHHHH
Confidence 3567899999888877641111111 0 000 011222335566666331 1121111 1 111233344
Q ss_pred HHHHHHHHHHC--CCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceee-ecCCCccCcc
Q 012396 155 LVFLKNWFLKF--PQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGI-ALGNPVLEFA 217 (464)
Q Consensus 155 ~~fL~~f~~~f--p~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi-~IGng~~dp~ 217 (464)
.+.++...+.+ ..-..+++.|.|||+||.-+-.++. .... . .-++++| .++.|...+.
T Consensus 67 ~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~-~~~~--~--~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 67 AEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALS-LPNY--D--PDSVKTIITLGTPHRGSP 127 (225)
T ss_pred HHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHh-cccc--c--cccEEEEEEEcCCCCCcc
Confidence 44555555444 2224678999999999964433332 2111 1 1235554 4777776653
No 155
>PLN02324 triacylglycerol lipase
Probab=66.59 E-value=15 Score=37.65 Aligned_cols=45 Identities=16% Similarity=0.008 Sum_probs=36.6
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHH
Q 012396 149 ITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLE 194 (464)
Q Consensus 149 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~ 194 (464)
.+.++++..|+...+.+|.. ...+.|+|||.||..+...|..|..
T Consensus 194 SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~ 238 (415)
T PLN02324 194 SAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVY 238 (415)
T ss_pred HHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHH
Confidence 45567788888888888753 2469999999999999888888876
No 156
>PLN02934 triacylglycerol lipase
Probab=64.81 E-value=16 Score=38.37 Aligned_cols=39 Identities=15% Similarity=0.186 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHH
Q 012396 153 DNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLE 194 (464)
Q Consensus 153 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~ 194 (464)
++...|+.+.+++|.+ +++++|||-||..+-.+|..|..
T Consensus 306 ~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 306 AVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHHH
Confidence 4566788888888864 69999999999999888877654
No 157
>PLN00413 triacylglycerol lipase
Probab=64.56 E-value=8.2 Score=40.07 Aligned_cols=39 Identities=21% Similarity=0.327 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHH
Q 012396 153 DNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLE 194 (464)
Q Consensus 153 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~ 194 (464)
++...|++.++.+|.. +++|+|||.||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p~~---kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNPTS---KFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCCCC---eEEEEecCHHHHHHHHHHHHHHh
Confidence 4566788888888754 69999999999999888877653
No 158
>PLN02761 lipase class 3 family protein
Probab=63.05 E-value=17 Score=38.19 Aligned_cols=66 Identities=15% Similarity=0.113 Sum_probs=45.3
Q ss_pred HhHHHHHHHHHHHHHHCCCC---CCCCEEEEeeccccccHHHHHHHHHHhccc-----cccccceeeecCCCcc
Q 012396 149 ITARDNLVFLKNWFLKFPQY---RNRSLFITGESYAGHYIPQLADLMLEFNKK-----EELFNLKGIALGNPVL 214 (464)
Q Consensus 149 ~~a~~~~~fL~~f~~~fp~~---~~~~~yi~GESYgG~yvP~~a~~i~~~n~~-----~~~inLkGi~IGng~~ 214 (464)
.+.++++..++...+.+|.. ....++|+|||.||..+-..|..|...+-. ...+++.-+..|.|=+
T Consensus 269 SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRV 342 (527)
T PLN02761 269 SAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRV 342 (527)
T ss_pred hHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCc
Confidence 45567888888888888532 223599999999999998888888652211 1134566666666554
No 159
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=62.73 E-value=14 Score=37.00 Aligned_cols=58 Identities=22% Similarity=0.254 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 153 DNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 153 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
++.+-++.....+| +..++++|+|-||.++...|..|....-. ...+++-+-.|-|-+
T Consensus 156 ~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~-~~~~v~v~tFG~PRv 213 (336)
T KOG4569|consen 156 GLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK-TSSPVKVYTFGQPRV 213 (336)
T ss_pred HHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC-CCCceEEEEecCCCc
Confidence 44455566666777 45699999999999999999999874321 124555555565544
No 160
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=62.55 E-value=13 Score=37.20 Aligned_cols=71 Identities=8% Similarity=0.098 Sum_probs=44.3
Q ss_pred ChHHhHHHHHHHHHHHHHHCCC-CCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 146 GDKITARDNLVFLKNWFLKFPQ-YRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 146 ~~~~~a~~~~~fL~~f~~~fp~-~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
-|.+.+..-...|+.+++..-+ -.-.++||..||+|.-.+-....+|.-++.+....+++=+++-.|-+|-
T Consensus 165 ~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 165 YDRESTNYSRPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred cchhhhhhhHHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 3555555555555555543211 1145799999999988777777777655443234567777777776665
No 161
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=61.01 E-value=14 Score=34.16 Aligned_cols=46 Identities=17% Similarity=0.261 Sum_probs=34.7
Q ss_pred HHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCc
Q 012396 159 KNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (464)
Q Consensus 159 ~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~ 213 (464)
-+|++.+|+-..+++-|.|-|.||-.+-.+|.+.- .++.++..+|.
T Consensus 10 i~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~---------~i~avVa~~ps 55 (213)
T PF08840_consen 10 IDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP---------QISAVVAISPS 55 (213)
T ss_dssp HHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS---------SEEEEEEES--
T ss_pred HHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC---------CccEEEEeCCc
Confidence 46888999998899999999999998888887762 47777766654
No 162
>PLN02162 triacylglycerol lipase
Probab=59.73 E-value=13 Score=38.59 Aligned_cols=39 Identities=13% Similarity=0.211 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHH
Q 012396 153 DNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLE 194 (464)
Q Consensus 153 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~ 194 (464)
.+.+.|+..+.++|.+ +++++|||.||..+-.+|..+..
T Consensus 263 ~I~~~L~~lL~k~p~~---kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 263 TIRQMLRDKLARNKNL---KYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HHHHHHHHHHHhCCCc---eEEEEecChHHHHHHHHHHHHHH
Confidence 3455667777777754 69999999999988877776654
No 163
>PLN02310 triacylglycerol lipase
Probab=59.64 E-value=19 Score=36.77 Aligned_cols=62 Identities=18% Similarity=0.089 Sum_probs=41.4
Q ss_pred hHHHHHHHHHHHHHHCCC-CCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 150 TARDNLVFLKNWFLKFPQ-YRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 150 ~a~~~~~fL~~f~~~fp~-~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
+.+++...++...+.+++ -....+.|+|||.||..+-..|..|.... ..+++.-+..|.|-+
T Consensus 187 a~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~---~~~~v~vyTFGsPRV 249 (405)
T PLN02310 187 ASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI---PDLFVSVISFGAPRV 249 (405)
T ss_pred HHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC---cCcceeEEEecCCCc
Confidence 445667777777776653 12346999999999999988887775421 133455566666655
No 164
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=59.00 E-value=18 Score=32.38 Aligned_cols=43 Identities=23% Similarity=0.464 Sum_probs=33.3
Q ss_pred ccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCC
Q 012396 370 IPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFS 442 (464)
Q Consensus 370 irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~D 442 (464)
++.+++.++.|..|++.-++.+.+.+ + ..++.+.++||+-..+
T Consensus 115 ~~~~viaS~nDp~vp~~~a~~~A~~l-----------------------------~-a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 115 FPSIVIASDNDPYVPFERAQRLAQRL-----------------------------G-AELIILGGGGHFNAAS 157 (171)
T ss_dssp CCEEEEEETTBSSS-HHHHHHHHHHH-----------------------------T--EEEEETS-TTSSGGG
T ss_pred CCeEEEEcCCCCccCHHHHHHHHHHc-----------------------------C-CCeEECCCCCCccccc
Confidence 45589999999999999999888855 3 6679999999997664
No 165
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=58.54 E-value=22 Score=33.40 Aligned_cols=67 Identities=21% Similarity=0.205 Sum_probs=39.8
Q ss_pred cccceEEEeCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHH
Q 012396 118 REANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQL 188 (464)
Q Consensus 118 ~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~ 188 (464)
.-..||-.|-- |.|=|.....+.....=-+-+-.|+-.+|...-+.-| ..|.|..|+||||+-.=.+
T Consensus 56 ~Gf~Vlt~dyR-G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~ 122 (281)
T COG4757 56 AGFEVLTFDYR-GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLL 122 (281)
T ss_pred cCceEEEEecc-cccCCCccccccCccchhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeeccc
Confidence 34578888876 9998876544322210111233444444444444444 5689999999999865333
No 166
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=56.83 E-value=30 Score=31.11 Aligned_cols=114 Identities=19% Similarity=0.147 Sum_probs=59.0
Q ss_pred ecCCCCCCCCEEEEECCCCCchhhhhhhhccCC---CcccCCC--cccccCCCcccccceEEEeCCCccccCcccCCCCc
Q 012396 68 EAETDPASKPLVLWLNGGPGCSSLGVGAFSENG---PFRPNGQ--VLVRNEYSWNREANMLFLETPIGVGFSYSKDASSY 142 (464)
Q Consensus 68 es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~G---P~~~~~~--~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~ 142 (464)
++-.|+.++--|.++- ||..+.. .-+.+.. +-.+... ......-.=.+.|-|.|++-....+....--...+
T Consensus 10 va~GD~d~A~~Vav~V--PG~~t~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~ 86 (177)
T PF06259_consen 10 VAVGDPDTADHVAVLV--PGTGTTL-DSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGY 86 (177)
T ss_pred EEECCcCCcCeeEEEc--CCCCCCc-ccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchH
Confidence 4556788888888887 6666653 3322110 0000000 00001111127888999865544221111111111
Q ss_pred cccChHHhHHHHHHHHHHHHHHC-CCCCCCCEEEEeeccccccHHHHHHH
Q 012396 143 QGVGDKITARDNLVFLKNWFLKF-PQYRNRSLFITGESYAGHYIPQLADL 191 (464)
Q Consensus 143 ~~~~~~~~a~~~~~fL~~f~~~f-p~~~~~~~yi~GESYgG~yvP~~a~~ 191 (464)
-+..|.++..|++..-..+ | ...+-++|||||..-+-..+..
T Consensus 87 ----A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 87 ----ARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred ----HHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHhhh
Confidence 2345677777777766656 3 3479999999998765444433
No 167
>PLN03037 lipase class 3 family protein; Provisional
Probab=56.28 E-value=24 Score=37.20 Aligned_cols=44 Identities=23% Similarity=0.108 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHCCCC-CCCCEEEEeeccccccHHHHHHHHHH
Q 012396 151 ARDNLVFLKNWFLKFPQY-RNRSLFITGESYAGHYIPQLADLMLE 194 (464)
Q Consensus 151 a~~~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvP~~a~~i~~ 194 (464)
-++++.-++...+.+++. ....++|+|||.||..+-..|..|..
T Consensus 297 reQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~ 341 (525)
T PLN03037 297 SEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAAR 341 (525)
T ss_pred HHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHH
Confidence 356667777777777642 24469999999999999888877765
No 168
>PLN02847 triacylglycerol lipase
Probab=55.84 E-value=22 Score=38.03 Aligned_cols=51 Identities=18% Similarity=0.287 Sum_probs=34.0
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCC
Q 012396 155 LVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGN 211 (464)
Q Consensus 155 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGn 211 (464)
...|++-++.+|.| ++.|+|||.||--+..++..|.+ +.. .-+++.+..|-
T Consensus 238 ~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe-~~~--fssi~CyAFgP 288 (633)
T PLN02847 238 TPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILRE-QKE--FSSTTCVTFAP 288 (633)
T ss_pred HHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhc-CCC--CCCceEEEecC
Confidence 34455556678876 59999999999977766655533 221 23567777775
No 169
>PLN02442 S-formylglutathione hydrolase
Probab=55.52 E-value=31 Score=33.39 Aligned_cols=49 Identities=10% Similarity=0.162 Sum_probs=36.3
Q ss_pred hcCccEEEEEcCCCcccCch-hHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCccccc
Q 012396 367 KAGIPVMVYSGDQDSVIPLT-GSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAP 440 (464)
Q Consensus 367 ~~~irVLiy~Gd~D~i~n~~-g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP 440 (464)
..+.+|++.+|+.|.+|+.. .++.+.+.++ +.+ .+ .++.+..|++|-..
T Consensus 215 ~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~-~~g-----------------------~~-~~~~~~pg~~H~~~ 264 (283)
T PLN02442 215 DVSATILIDQGEADKFLKEQLLPENFEEACK-EAG-----------------------AP-VTLRLQPGYDHSYF 264 (283)
T ss_pred ccCCCEEEEECCCCccccccccHHHHHHHHH-HcC-----------------------CC-eEEEEeCCCCccHH
Confidence 34689999999999999974 4677776553 111 14 88899999999755
No 170
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=54.27 E-value=35 Score=33.47 Aligned_cols=71 Identities=10% Similarity=0.043 Sum_probs=38.7
Q ss_pred ChHHhHHHHHHHHHHHHHHCCC-CCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCcccc
Q 012396 146 GDKITARDNLVFLKNWFLKFPQ-YRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFATD 219 (464)
Q Consensus 146 ~~~~~a~~~~~fL~~f~~~fp~-~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp~~~ 219 (464)
+-+..++++-.+++-+-..... +...++.|+|||=|..= +.+++...+.....-.++|+++-.|+-|....
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQd---vl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQD---VLHYLSSPNPSPSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHH---HHHHHHH-TT---CCCEEEEEEEEE---TTST
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHH---HHHHHhccCccccccceEEEEEeCCCCChhHh
Confidence 4455666766555555554322 34668999999999764 44455554432224579999999998877543
No 171
>PRK14567 triosephosphate isomerase; Provisional
Probab=51.85 E-value=37 Score=32.45 Aligned_cols=59 Identities=19% Similarity=0.302 Sum_probs=42.7
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 149 ITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 149 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
+.++++..++++++..+-+-....+-|. |||---|.=+..|.+ .-++.|+.||.+.+++
T Consensus 179 e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~------~~diDG~LVGgasL~~ 237 (253)
T PRK14567 179 EQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILS------LPDVDGGLIGGASLKA 237 (253)
T ss_pred HHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHc------CCCCCEEEeehhhhcH
Confidence 4567788999998876522111222222 899989999999987 3379999999999877
No 172
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=51.74 E-value=36 Score=31.73 Aligned_cols=57 Identities=19% Similarity=0.368 Sum_probs=41.7
Q ss_pred CccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCc--HH
Q 012396 369 GIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQP--ER 446 (464)
Q Consensus 369 ~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP--~~ 446 (464)
..+.|-+.|+.|.+++..-.+...+. +.+. -+...-.||+||.-.| +.
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~----------------------------~~~a--~vl~HpggH~VP~~~~~~~~ 212 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAES----------------------------FKDA--TVLEHPGGHIVPNKAKYKEK 212 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHh----------------------------cCCC--eEEecCCCccCCCchHHHHH
Confidence 47899999999999999988888772 2231 3667889999998764 34
Q ss_pred HHHHHHHHH
Q 012396 447 SLVLFKAFL 455 (464)
Q Consensus 447 al~mi~~fl 455 (464)
+.+.|+.++
T Consensus 213 i~~fi~~~~ 221 (230)
T KOG2551|consen 213 IADFIQSFL 221 (230)
T ss_pred HHHHHHHHH
Confidence 455555544
No 173
>PRK07868 acyl-CoA synthetase; Validated
Probab=50.97 E-value=28 Score=40.28 Aligned_cols=59 Identities=14% Similarity=0.230 Sum_probs=45.8
Q ss_pred CccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEE-EEEcCCcccccC---CCc
Q 012396 369 GIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSF-ATIRGASHEAPF---SQP 444 (464)
Q Consensus 369 ~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltf-v~V~gAGHmvP~---DqP 444 (464)
..+||++.|..|.++|....+.+.+.+ .+ ..+ ..+.++|||.++ --|
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i----------------------------~~-a~~~~~~~~~GH~g~~~g~~a~ 347 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAA----------------------------PN-AEVYESLIRAGHFGLVVGSRAA 347 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhC----------------------------CC-CeEEEEeCCCCCEeeeechhhh
Confidence 479999999999999999988886632 12 333 456899999544 567
Q ss_pred HHHHHHHHHHHc
Q 012396 445 ERSLVLFKAFLD 456 (464)
Q Consensus 445 ~~al~mi~~fl~ 456 (464)
+++...+.+||.
T Consensus 348 ~~~wp~i~~wl~ 359 (994)
T PRK07868 348 QQTWPTVADWVK 359 (994)
T ss_pred hhhChHHHHHHH
Confidence 788888899997
No 174
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=50.69 E-value=18 Score=32.97 Aligned_cols=64 Identities=27% Similarity=0.258 Sum_probs=41.0
Q ss_pred eEEEeCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHH
Q 012396 122 MLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLE 194 (464)
Q Consensus 122 ~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~ 194 (464)
.|-.+- -|||-|-++-..+. .+.+.|...++++| .++|+-+ -++++|-|+|+..+-.+|.+.-+
T Consensus 63 tlRfNf-RgVG~S~G~fD~Gi---GE~~Da~aaldW~~---~~hp~s~--~~~l~GfSFGa~Ia~~la~r~~e 126 (210)
T COG2945 63 TLRFNF-RGVGRSQGEFDNGI---GELEDAAAALDWLQ---ARHPDSA--SCWLAGFSFGAYIAMQLAMRRPE 126 (210)
T ss_pred EEeecc-cccccccCcccCCc---chHHHHHHHHHHHH---hhCCCch--hhhhcccchHHHHHHHHHHhccc
Confidence 344453 39999988765554 44444544444444 3688754 36999999998776666666543
No 175
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=50.66 E-value=23 Score=32.91 Aligned_cols=48 Identities=10% Similarity=0.075 Sum_probs=35.9
Q ss_pred HHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhc
Q 012396 148 KITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFN 196 (464)
Q Consensus 148 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n 196 (464)
+..|+.+.+.|.+..+..+.- .+++.+.|+|.||.++-.....+.+.+
T Consensus 56 ~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~~ 103 (217)
T PF05057_consen 56 DVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDKP 103 (217)
T ss_pred HHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhcc
Confidence 345677777777777766543 468999999999999987777776643
No 176
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=50.38 E-value=80 Score=24.08 Aligned_cols=77 Identities=19% Similarity=0.149 Sum_probs=44.2
Q ss_pred ceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCC
Q 012396 60 RALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDA 139 (464)
Q Consensus 60 ~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~ 139 (464)
..||+..+...+. .+.+|+.++|--..|.-. .-| .. .|.. +-.+|+-+|+. |.|.|-+...
T Consensus 2 ~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~ry-~~~---a~------~L~~------~G~~V~~~D~r-GhG~S~g~rg 62 (79)
T PF12146_consen 2 TKLFYRRWKPENP--PKAVVVIVHGFGEHSGRY-AHL---AE------FLAE------QGYAVFAYDHR-GHGRSEGKRG 62 (79)
T ss_pred cEEEEEEecCCCC--CCEEEEEeCCcHHHHHHH-HHH---HH------HHHh------CCCEEEEECCC-cCCCCCCccc
Confidence 4577766654322 688999999764444432 222 21 1222 23468889988 9999975322
Q ss_pred CCccccChHHhHHHHHHHH
Q 012396 140 SSYQGVGDKITARDNLVFL 158 (464)
Q Consensus 140 ~~~~~~~~~~~a~~~~~fL 158 (464)
+.. +-++..+|+..|+
T Consensus 63 --~~~-~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 63 --HID-SFDDYVDDLHQFI 78 (79)
T ss_pred --ccC-CHHHHHHHHHHHh
Confidence 211 3345556665554
No 177
>PF05049 IIGP: Interferon-inducible GTPase (IIGP); InterPro: IPR007743 Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence. IIGP is predominantly associated with the Golgi apparatus and also localizes to the endoplasmic reticulum and exerts a distinct role in IFN-induced intracellular membrane trafficking or processing [].; GO: 0005525 GTP binding, 0016817 hydrolase activity, acting on acid anhydrides, 0016020 membrane; PDB: 1TPZ_A 1TQD_A 1TQ6_A 1TQ2_B 1TQ4_A.
Probab=49.21 E-value=12 Score=37.94 Aligned_cols=57 Identities=23% Similarity=0.372 Sum_probs=35.4
Q ss_pred CCCCEEEEECCCCCc--hhhhhhhhccCCCcccC-------CCcccccCCCcccccceEEEeCCCccc
Q 012396 74 ASKPLVLWLNGGPGC--SSLGVGAFSENGPFRPN-------GQVLVRNEYSWNREANMLFLETPIGVG 132 (464)
Q Consensus 74 ~~~Pl~lwlnGGPG~--Ss~~~G~f~E~GP~~~~-------~~~~~~n~~sW~~~an~l~iDqPvGtG 132 (464)
++.|+=|-+.|-+|+ ||+. -.+-.+|+=.-+ ..+..+.+|.--++-||.++|.| |+|
T Consensus 32 ~~~~l~IaV~G~sGsGKSSfI-NalrGl~~~d~~aA~tGv~etT~~~~~Y~~p~~pnv~lWDlP-G~g 97 (376)
T PF05049_consen 32 DNAPLNIAVTGESGSGKSSFI-NALRGLGHEDEGAAPTGVVETTMEPTPYPHPKFPNVTLWDLP-GIG 97 (376)
T ss_dssp HH--EEEEEEESTTSSHHHHH-HHHTT--TTSTTS--SSSHSCCTS-EEEE-SS-TTEEEEEE---GG
T ss_pred hcCceEEEEECCCCCCHHHHH-HHHhCCCCCCcCcCCCCCCcCCCCCeeCCCCCCCCCeEEeCC-CCC
Confidence 357888888886665 7786 777777775432 22566778888899999999999 887
No 178
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=48.93 E-value=9.1 Score=35.40 Aligned_cols=48 Identities=21% Similarity=0.331 Sum_probs=30.6
Q ss_pred CccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCcH
Q 012396 369 GIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPE 445 (464)
Q Consensus 369 ~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~ 445 (464)
.+++|-+.|..|.+++...++...+... +. .-+.....||.||...+.
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~----------------------------~~-~~v~~h~gGH~vP~~~~~ 208 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFD----------------------------PD-ARVIEHDGGHHVPRKKED 208 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHH----------------------------HH-EEEEEESSSSS----HHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhcc----------------------------CC-cEEEEECCCCcCcCChhh
Confidence 5899999999999999888888777432 11 336677899999998764
No 179
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=48.29 E-value=10 Score=34.31 Aligned_cols=17 Identities=35% Similarity=0.864 Sum_probs=14.1
Q ss_pred CCCCEEEEECCCCCchh
Q 012396 74 ASKPLVLWLNGGPGCSS 90 (464)
Q Consensus 74 ~~~Pl~lwlnGGPG~Ss 90 (464)
.+.|-|||+=|||||--
T Consensus 5 ~~~~~IifVlGGPGsgK 21 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSGK 21 (195)
T ss_pred ccCCCEEEEEcCCCCCc
Confidence 35788999999999763
No 180
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=47.87 E-value=1.1e+02 Score=29.23 Aligned_cols=103 Identities=16% Similarity=0.174 Sum_probs=58.8
Q ss_pred CEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccCCCCccccChHHhHHHHHH
Q 012396 77 PLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLV 156 (464)
Q Consensus 77 Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~ 156 (464)
|.+++++++=|.-..+-.+-.+.+|- .-++-++.| |-|. ...... +-++.|+..++
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-----------------~~v~~l~a~-g~~~----~~~~~~--~l~~~a~~yv~ 56 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-----------------LPVYGLQAP-GYGA----GEQPFA--SLDDMAAAYVA 56 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-----------------ceeeccccC-cccc----cccccC--CHHHHHHHHHH
Confidence 56888887776543321222233331 234557777 4442 111121 33444554444
Q ss_pred HHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 157 FLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 157 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
.|+ +.-|+ -|++|.|-|+||.-+=.+|.++..+-. .+.=++|.+.+.
T Consensus 57 ~Ir---~~QP~---GPy~L~G~S~GG~vA~evA~qL~~~G~-----~Va~L~llD~~~ 103 (257)
T COG3319 57 AIR---RVQPE---GPYVLLGWSLGGAVAFEVAAQLEAQGE-----EVAFLGLLDAVP 103 (257)
T ss_pred HHH---HhCCC---CCEEEEeeccccHHHHHHHHHHHhCCC-----eEEEEEEeccCC
Confidence 443 45665 389999999999999999999987432 244455555443
No 181
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=47.37 E-value=24 Score=36.03 Aligned_cols=61 Identities=15% Similarity=0.172 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHh--ccccccccceeeecCCCccCc
Q 012396 153 DNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEF--NKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 153 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~--n~~~~~inLkGi~IGng~~dp 216 (464)
+++.-|++.+..-=+..++++.|+|||+||-++-.+-....+. .++ .|+ +=|.|+-|+...
T Consensus 101 ~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~--~i~-~~i~i~~p~~Gs 163 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDK--YIK-RFISIGTPFGGS 163 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHh--hhh-EEEEeCCCCCCC
Confidence 3444444444431122378999999999999888777666432 111 232 335566666543
No 182
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=46.20 E-value=46 Score=31.35 Aligned_cols=61 Identities=23% Similarity=0.452 Sum_probs=46.0
Q ss_pred ccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCCcH---H
Q 012396 370 IPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPE---R 446 (464)
Q Consensus 370 irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~DqP~---~ 446 (464)
.++|+.+|..|.+++....+....... ... ...+.+.+++|....+.+. +
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~--------------------------~~~-~~~~~~~~~~H~~~~~~~~~~~~ 285 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAAR--------------------------ERP-KKLLFVPGGGHIDLYDNPPAVEQ 285 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhc--------------------------cCC-ceEEEecCCccccccCccHHHHH
Confidence 799999999999999888887777321 002 5668888999999987666 5
Q ss_pred HHHHHHHHHcC
Q 012396 447 SLVLFKAFLDS 457 (464)
Q Consensus 447 al~mi~~fl~~ 457 (464)
++.-+.+|+..
T Consensus 286 ~~~~~~~f~~~ 296 (299)
T COG1073 286 ALDKLAEFLER 296 (299)
T ss_pred HHHHHHHHHHH
Confidence 66666667643
No 183
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=42.93 E-value=22 Score=32.94 Aligned_cols=48 Identities=21% Similarity=0.343 Sum_probs=26.6
Q ss_pred CccEEEEEcCCCcccCchhHH-HHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccc
Q 012396 369 GIPVMVYSGDQDSVIPLTGSR-KLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEA 439 (464)
Q Consensus 369 ~irVLiy~Gd~D~i~n~~g~~-~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmv 439 (464)
.-+||+.+|..|.+-|..-.. ..+++|+. .+. .+ + ++.+...+|||++
T Consensus 115 ~~piLli~g~dD~~WpS~~~a~~i~~rL~~-~~~--------------------~~-~-~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 115 KGPILLISGEDDQIWPSSEMAEQIEERLKA-AGF--------------------PH-N-VEHLSYPGAGHLI 163 (213)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHHHHHHC-TT---------------------------EEEEETTB-S--
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHHH-hCC--------------------CC-c-ceEEEcCCCCcee
Confidence 579999999999998755444 44455531 111 11 3 7788889999996
No 184
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=42.47 E-value=25 Score=23.68 Aligned_cols=33 Identities=18% Similarity=0.122 Sum_probs=24.6
Q ss_pred CCccCcccccchhHHHhhhccCCChHHHHHHHh
Q 012396 211 NPVLEFATDFNSRAEFFWSHGLISDATYTMFTS 243 (464)
Q Consensus 211 ng~~dp~~~~~~~~~~~~~~gli~~~~~~~~~~ 243 (464)
.|.+||.+-..--.+=|+..|+|+.+++..+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 477888776655567789999999999877654
No 185
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=40.82 E-value=37 Score=30.31 Aligned_cols=51 Identities=10% Similarity=0.040 Sum_probs=31.2
Q ss_pred HHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccC
Q 012396 157 FLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (464)
Q Consensus 157 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~d 215 (464)
.++.+-+..... ..+.+|+|||.|+.-+-..+. .+. ..+++|+++..|+-.
T Consensus 42 W~~~l~~~i~~~-~~~~ilVaHSLGc~~~l~~l~---~~~----~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 42 WVQALDQAIDAI-DEPTILVAHSLGCLTALRWLA---EQS----QKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHCCHC--TTTEEEEEETHHHHHHHHHHH---HTC----CSSEEEEEEES--SC
T ss_pred HHHHHHHHHhhc-CCCeEEEEeCHHHHHHHHHHh---hcc----cccccEEEEEcCCCc
Confidence 444444444444 567999999999765444443 211 348999999999843
No 186
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=39.84 E-value=99 Score=28.22 Aligned_cols=47 Identities=23% Similarity=0.377 Sum_probs=30.3
Q ss_pred hcCccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCccc
Q 012396 367 KAGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHE 438 (464)
Q Consensus 367 ~~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHm 438 (464)
+...+|++..|..|..++....+.+.+.|+.. + .. .++.+..||+|-
T Consensus 143 ~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~-~-----------------------~~-~~~~~y~ga~Hg 189 (218)
T PF01738_consen 143 KIKAPVLILFGENDPFFPPEEVEALEEALKAA-G-----------------------VD-VEVHVYPGAGHG 189 (218)
T ss_dssp G--S-EEEEEETT-TTS-HHHHHHHHHHHHCT-T-----------------------TT-EEEEEETT--TT
T ss_pred ccCCCEeecCccCCCCCChHHHHHHHHHHHhc-C-----------------------Cc-EEEEECCCCccc
Confidence 34579999999999999999988888866311 1 13 777888889996
No 187
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=37.98 E-value=25 Score=27.31 Aligned_cols=34 Identities=15% Similarity=0.369 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHH
Q 012396 153 DNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLE 194 (464)
Q Consensus 153 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~ 194 (464)
+++++.+.|+-++ |-.+.+.+.|+|| .+.+-|.+
T Consensus 8 dIYDAvRaflLr~--Y~~KrfIV~g~S~------~IlhNIyr 41 (100)
T PF07389_consen 8 DIYDAVRAFLLRH--YYDKRFIVYGRSN------AILHNIYR 41 (100)
T ss_pred hHHHHHHHHHHHH--HccceEEEecchH------HHHHHHHH
Confidence 6788889988886 5577899999999 45555544
No 188
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=36.65 E-value=21 Score=22.99 Aligned_cols=12 Identities=33% Similarity=1.043 Sum_probs=6.4
Q ss_pred CCEEEEECCCCC
Q 012396 76 KPLVLWLNGGPG 87 (464)
Q Consensus 76 ~Pl~lwlnGGPG 87 (464)
.--.|||+|-||
T Consensus 24 ~gRTiWFqGdPG 35 (39)
T PF09292_consen 24 NGRTIWFQGDPG 35 (39)
T ss_dssp TS-EEEESS---
T ss_pred CCCEEEeeCCCC
Confidence 345799999887
No 189
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=36.53 E-value=2.6e+02 Score=29.65 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=24.4
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHH
Q 012396 155 LVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLA 189 (464)
Q Consensus 155 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a 189 (464)
+.++++....|-. -.+++-|+|+|.||..|-.+.
T Consensus 180 L~wv~~~I~~FGG-dp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 180 LRWVKDNIPSFGG-DPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHHhcCC-CCCeEEEEeechhHHHHHHHh
Confidence 4566777777753 356799999999998775433
No 190
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=36.51 E-value=43 Score=34.77 Aligned_cols=46 Identities=13% Similarity=0.150 Sum_probs=31.3
Q ss_pred HhHHHHHHHHHHHHHH-CCCCCCCCEEEEeeccccccHHHHHHHHHH
Q 012396 149 ITARDNLVFLKNWFLK-FPQYRNRSLFITGESYAGHYIPQLADLMLE 194 (464)
Q Consensus 149 ~~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~~a~~i~~ 194 (464)
+..++.+.-|+..+.. +.....+++.|++||+||.|+-+|-...-+
T Consensus 159 e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 159 EERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEA 205 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccc
Confidence 3455566666665554 222234899999999999999888765433
No 191
>PLN02429 triosephosphate isomerase
Probab=36.24 E-value=81 Score=31.17 Aligned_cols=59 Identities=17% Similarity=0.223 Sum_probs=41.9
Q ss_pred HhHHHHHHHHHHHHHH-CCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 149 ITARDNLVFLKNWFLK-FPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 149 ~~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
+.++.+..++++|+.. +.+-....+-|. |||---|.=+..|.. ..+++|+.||.+.+++
T Consensus 239 e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~------~~diDG~LVGgASL~~ 298 (315)
T PLN02429 239 QQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAK------EEDIDGFLVGGASLKG 298 (315)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhc------CCCCCEEEeecceecH
Confidence 3466778899988875 322212222222 899999999988877 3479999999999876
No 192
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=35.71 E-value=58 Score=31.24 Aligned_cols=40 Identities=20% Similarity=0.145 Sum_probs=27.0
Q ss_pred CEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 172 SLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 172 ~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
++.|+|||=||+-+-.+|....+ ....+++++++..+|+=
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~~~---~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGNAS---SSLDLRFSALILLDPVD 131 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhhcc---cccccceeEEEEecccc
Confidence 59999999999954444433211 11246899999888764
No 193
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=35.48 E-value=30 Score=31.89 Aligned_cols=105 Identities=18% Similarity=0.118 Sum_probs=65.0
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcccccceEEEeCCCccccCcccC
Q 012396 59 QRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKD 138 (464)
Q Consensus 59 ~~~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~~ 138 (464)
+.++.|--+-+ -.--||-+-|--||+-..+ +|-..+ .++ -.. ..++-+|.| |-|-|...+
T Consensus 30 g~ql~y~~~G~-----G~~~iLlipGalGs~~tDf------~pql~~-----l~k--~l~-~TivawDPp-GYG~SrPP~ 89 (277)
T KOG2984|consen 30 GTQLGYCKYGH-----GPNYILLIPGALGSYKTDF------PPQLLS-----LFK--PLQ-VTIVAWDPP-GYGTSRPPE 89 (277)
T ss_pred CceeeeeecCC-----CCceeEecccccccccccC------CHHHHh-----cCC--CCc-eEEEEECCC-CCCCCCCCc
Confidence 46677654433 1345788899999998863 332111 111 111 578899966 999998654
Q ss_pred CCCccc---cChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHH
Q 012396 139 ASSYQG---VGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLE 194 (464)
Q Consensus 139 ~~~~~~---~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~ 194 (464)
.+ +.. ..|.+.|-|+.++| +-.+|-|.|-|=||.-+-..|.+-.+
T Consensus 90 Rk-f~~~ff~~Da~~avdLM~aL----------k~~~fsvlGWSdGgiTalivAak~~e 137 (277)
T KOG2984|consen 90 RK-FEVQFFMKDAEYAVDLMEAL----------KLEPFSVLGWSDGGITALIVAAKGKE 137 (277)
T ss_pred cc-chHHHHHHhHHHHHHHHHHh----------CCCCeeEeeecCCCeEEEEeeccChh
Confidence 32 221 13555666666665 35689999999999877666655433
No 194
>PRK07868 acyl-CoA synthetase; Validated
Probab=34.80 E-value=1.8e+02 Score=33.78 Aligned_cols=38 Identities=18% Similarity=0.177 Sum_probs=25.0
Q ss_pred CCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 170 NRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 170 ~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
..+++++|.|.||..+-.+|.. .. .-.++++++.+.-+
T Consensus 140 ~~~v~lvG~s~GG~~a~~~aa~--~~-----~~~v~~lvl~~~~~ 177 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAAAY--RR-----SKDIASIVTFGSPV 177 (994)
T ss_pred CCceEEEEEChhHHHHHHHHHh--cC-----CCccceEEEEeccc
Confidence 3579999999999988777653 11 11366666544443
No 195
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=34.20 E-value=42 Score=32.19 Aligned_cols=55 Identities=18% Similarity=0.283 Sum_probs=31.8
Q ss_pred HHHHHHHHHH----HHHH-CCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 151 ARDNLVFLKN----WFLK-FPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 151 a~~~~~fL~~----f~~~-fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
|+.+.+||.+ |... ++ ....+--|+|+||||-.+-. .|+++.+ -+.-+.+++|.+
T Consensus 113 ~~~f~~fL~~~lkP~Ie~~y~-~~~~~~~i~GhSlGGLfvl~---aLL~~p~-----~F~~y~~~SPSl 172 (264)
T COG2819 113 GDAFREFLTEQLKPFIEARYR-TNSERTAIIGHSLGGLFVLF---ALLTYPD-----CFGRYGLISPSL 172 (264)
T ss_pred hHHHHHHHHHhhHHHHhcccc-cCcccceeeeecchhHHHHH---HHhcCcc-----hhceeeeecchh
Confidence 4455566654 6654 43 23445899999999987643 3344211 244556666544
No 196
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=33.84 E-value=51 Score=29.23 Aligned_cols=28 Identities=25% Similarity=0.345 Sum_probs=23.7
Q ss_pred CCCCCCEEEEeeccccccHHHHHHHHHH
Q 012396 167 QYRNRSLFITGESYAGHYIPQLADLMLE 194 (464)
Q Consensus 167 ~~~~~~~yi~GESYgG~yvP~~a~~i~~ 194 (464)
....-|+.|-|.||||+-...+|..+..
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~A 112 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQA 112 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhcC
Confidence 4556689999999999999999988754
No 197
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=33.67 E-value=23 Score=36.01 Aligned_cols=38 Identities=18% Similarity=0.123 Sum_probs=22.3
Q ss_pred CEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCccc
Q 012396 172 SLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFAT 218 (464)
Q Consensus 172 ~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp~~ 218 (464)
.+.++||||||.-+-. .+.+. ..++..++-+||.-|..
T Consensus 229 ~i~~~GHSFGGATa~~---~l~~d------~r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQ---ALRQD------TRFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEETHHHHHHHH---HHHH-------TT--EEEEES---TTS-
T ss_pred heeeeecCchHHHHHH---HHhhc------cCcceEEEeCCcccCCC
Confidence 5899999999875543 33331 25778889999988753
No 198
>PRK14566 triosephosphate isomerase; Provisional
Probab=33.17 E-value=81 Score=30.29 Aligned_cols=59 Identities=17% Similarity=0.287 Sum_probs=43.4
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 149 ITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 149 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
+.|+++..|+++++...-.-....+=|. |||---|.=+..|... -++.|+.||...+++
T Consensus 189 e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~------~dIDG~LVGgASL~~ 247 (260)
T PRK14566 189 EQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQ------PDVDGGLIGGASLNS 247 (260)
T ss_pred HHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcC------CCCCeEEechHhcCH
Confidence 3577888999999875421111222232 9999999999999873 379999999998887
No 199
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=31.86 E-value=1.3e+02 Score=30.57 Aligned_cols=93 Identities=15% Similarity=0.223 Sum_probs=63.3
Q ss_pred hhhhccCcHHHHHHhccCcccccccceecccccccccCcCCChHHHHHHHHhcCccEEEEEcCCCcccCchhHHHHHHHH
Q 012396 316 ETVNYLNRKDVQKALHARLVGVRSWAVCSNILDYELLDLEIPTITIVGKLVKAGIPVMVYSGDQDSVIPLTGSRKLVNGL 395 (464)
Q Consensus 316 ~~~~YLN~~~Vr~aLhv~~~~~~~w~~cs~~v~~~~~d~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~l 395 (464)
.+..+|+.|+.++.+.+- +......+| .++-+|.+|--|--.....+..+.+.|
T Consensus 235 gi~~~l~tp~f~~L~~iv-----------------------DP~~Y~~rL---~~PK~ii~atgDeFf~pD~~~~y~d~L 288 (367)
T PF10142_consen 235 GITQQLDTPEFDKLMQIV-----------------------DPYSYRDRL---TMPKYIINATGDEFFVPDSSNFYYDKL 288 (367)
T ss_pred CchhhcCCHHHHHHHHhc-----------------------CHHHHHHhc---CccEEEEecCCCceeccCchHHHHhhC
Confidence 356789999888888542 122234444 589999999999877777777777755
Q ss_pred HHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccC-CCcHHHHHHHHHHHcCCCCCC
Q 012396 396 AKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPF-SQPERSLVLFKAFLDSRPLPE 462 (464)
Q Consensus 396 ~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~-DqP~~al~mi~~fl~~~~l~~ 462 (464)
.+ ...| -.|.|+||..-. +--+.....+++.+.|+++|+
T Consensus 289 ~G--------------------------~K~l--r~vPN~~H~~~~~~~~~~l~~f~~~~~~~~~lP~ 328 (367)
T PF10142_consen 289 PG--------------------------EKYL--RYVPNAGHSLIGSDVVQSLRAFYNRIQNGRPLPQ 328 (367)
T ss_pred CC--------------------------CeeE--EeCCCCCcccchHHHHHHHHHHHHHHHcCCCCCe
Confidence 31 0113 567899998544 334555666777778999985
No 200
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.66 E-value=70 Score=35.47 Aligned_cols=40 Identities=15% Similarity=0.052 Sum_probs=25.7
Q ss_pred HHhHHHHHHHHHHHH---HHCCCCC---CCCEEEEeeccccccHHH
Q 012396 148 KITARDNLVFLKNWF---LKFPQYR---NRSLFITGESYAGHYIPQ 187 (464)
Q Consensus 148 ~~~a~~~~~fL~~f~---~~fp~~~---~~~~yi~GESYgG~yvP~ 187 (464)
.+.++-+.++++..+ +.-+|++ ...+.|.||||||.-+-+
T Consensus 153 ~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra 198 (973)
T KOG3724|consen 153 LDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARA 198 (973)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHH
Confidence 344555566665444 4445565 556999999999975443
No 201
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=31.45 E-value=85 Score=29.73 Aligned_cols=90 Identities=19% Similarity=0.266 Sum_probs=57.3
Q ss_pred CCCCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCccc----ccceEEEeCCCccccCcccCCCCccccChH
Q 012396 73 PASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNR----EANMLFLETPIGVGFSYSKDASSYQGVGDK 148 (464)
Q Consensus 73 ~~~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~----~an~l~iDqPvGtGfSy~~~~~~~~~~~~~ 148 (464)
+..++-++-|-=--|+||.+ -+|.+ .--++=|+.| |-|--+.... . + +-+
T Consensus 4 ~~~~~~L~cfP~AGGsa~~f---------------------r~W~~~lp~~iel~avqlP-GR~~r~~ep~--~-~-di~ 57 (244)
T COG3208 4 PGARLRLFCFPHAGGSASLF---------------------RSWSRRLPADIELLAVQLP-GRGDRFGEPL--L-T-DIE 57 (244)
T ss_pred CCCCceEEEecCCCCCHHHH---------------------HHHHhhCCchhheeeecCC-CcccccCCcc--c-c-cHH
Confidence 45566666666555666664 24443 3467888988 8775444322 1 1 233
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHH
Q 012396 149 ITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLE 194 (464)
Q Consensus 149 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~ 194 (464)
..|+.+...|+ |-+..+|+-++|+|+||+.+=.+|.++.+
T Consensus 58 ~Lad~la~el~------~~~~d~P~alfGHSmGa~lAfEvArrl~~ 97 (244)
T COG3208 58 SLADELANELL------PPLLDAPFALFGHSMGAMLAFEVARRLER 97 (244)
T ss_pred HHHHHHHHHhc------cccCCCCeeecccchhHHHHHHHHHHHHH
Confidence 33444433332 23567899999999999999999999876
No 202
>PF15613 WHIM2: WSTF, HB1, Itc1p, MBD9 motif 2
Probab=31.01 E-value=93 Score=20.33 Aligned_cols=28 Identities=11% Similarity=0.336 Sum_probs=13.5
Q ss_pred ceEEEEEEecCCCCCCCCEEEEECCCCC
Q 012396 60 RALFYYFAEAETDPASKPLVLWLNGGPG 87 (464)
Q Consensus 60 ~~lfy~f~es~~~~~~~Pl~lwlnGGPG 87 (464)
.+-+|||-.+........--+|+.+||+
T Consensus 11 ~NrYwwf~~s~~~~~~~~~~~~v~~~~~ 38 (38)
T PF15613_consen 11 GNRYWWFSSSSSNSQYYNGGRFVEQGPD 38 (38)
T ss_pred CceEEEEecccccCCCCCceEEEEeCCC
Confidence 4566777444433333334444445664
No 203
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=30.52 E-value=85 Score=30.05 Aligned_cols=66 Identities=29% Similarity=0.347 Sum_probs=41.5
Q ss_pred hcCccEEEEEcC------CCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcC--Cccc
Q 012396 367 KAGIPVMVYSGD------QDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRG--ASHE 438 (464)
Q Consensus 367 ~~~irVLiy~Gd------~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~g--AGHm 438 (464)
.++++||-+.|+ .|.+||..+.+.. +.| +. +. ... .+..+|.| |.|-
T Consensus 182 p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl-~~L---~~-----~~---------------~~~-Y~e~~v~G~~a~HS 236 (255)
T PF06028_consen 182 PKNIQVLNIYGDLEDGSNSDGIVPNASSLSL-RYL---LK-----NR---------------AKS-YQEKTVTGKDAQHS 236 (255)
T ss_dssp TTT-EEEEEEEESBTTCSBTSSSBHHHHCTH-HHH---CT-----TT---------------SSE-EEEEEEESGGGSCC
T ss_pred CCCeEEEEEecccCCCCCCCeEEeHHHHHHH-HHH---hh-----cc---------------cCc-eEEEEEECCCCccc
Confidence 357899999999 7888887777432 222 00 00 012 45566755 7898
Q ss_pred ccCCCcHHHHHHHHHHHcCC
Q 012396 439 APFSQPERSLVLFKAFLDSR 458 (464)
Q Consensus 439 vP~DqP~~al~mi~~fl~~~ 458 (464)
--.+.| .+.++|.+||.++
T Consensus 237 ~LheN~-~V~~~I~~FLw~k 255 (255)
T PF06028_consen 237 QLHENP-QVDKLIIQFLWGK 255 (255)
T ss_dssp GGGCCH-HHHHHHHHHHCT-
T ss_pred cCCCCH-HHHHHHHHHhcCC
Confidence 777777 5668888898764
No 204
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=29.62 E-value=1.2e+02 Score=27.09 Aligned_cols=81 Identities=12% Similarity=0.202 Sum_probs=48.1
Q ss_pred ceEEEeCCCcccc-CcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHH--HHHhcc
Q 012396 121 NMLFLETPIGVGF-SYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADL--MLEFNK 197 (464)
Q Consensus 121 n~l~iDqPvGtGf-Sy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~--i~~~n~ 197 (464)
++--|+-|+..+. +|.. +....++++...++++.++-|. .++.|+|-|=|+.-+-.++.. +..
T Consensus 41 ~~~~V~YpA~~~~~~y~~--------S~~~G~~~~~~~i~~~~~~CP~---~kivl~GYSQGA~V~~~~~~~~~l~~--- 106 (179)
T PF01083_consen 41 AVQGVEYPASLGPNSYGD--------SVAAGVANLVRLIEEYAARCPN---TKIVLAGYSQGAMVVGDALSGDGLPP--- 106 (179)
T ss_dssp EEEE--S---SCGGSCHH--------HHHHHHHHHHHHHHHHHHHSTT---SEEEEEEETHHHHHHHHHHHHTTSSH---
T ss_pred EEEecCCCCCCCcccccc--------cHHHHHHHHHHHHHHHHHhCCC---CCEEEEecccccHHHHHHHHhccCCh---
Confidence 3444667777666 3331 3345567788899999999984 589999999997766555544 110
Q ss_pred cccccccee-eecCCCccCc
Q 012396 198 KEELFNLKG-IALGNPVLEF 216 (464)
Q Consensus 198 ~~~~inLkG-i~IGng~~dp 216 (464)
...-++.+ +.+|||.-.+
T Consensus 107 -~~~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 107 -DVADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp -HHHHHEEEEEEES-TTTBT
T ss_pred -hhhhhEEEEEEecCCcccC
Confidence 00235666 5788887643
No 205
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=29.19 E-value=63 Score=30.20 Aligned_cols=28 Identities=25% Similarity=0.497 Sum_probs=24.2
Q ss_pred CccEEEEEcCCCcccCchhHHHHHHHHH
Q 012396 369 GIPVMVYSGDQDSVIPLTGSRKLVNGLA 396 (464)
Q Consensus 369 ~irVLiy~Gd~D~i~n~~g~~~~i~~l~ 396 (464)
+++++|++|+.|..|+....++.++...
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~~ 196 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQWL 196 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHHH
Confidence 5789999999999999998888887554
No 206
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=28.45 E-value=1.4e+02 Score=30.18 Aligned_cols=114 Identities=22% Similarity=0.261 Sum_probs=64.4
Q ss_pred CCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCcc--cccceEEEeCCCccccCcccCCCCccccChHHhHH
Q 012396 75 SKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWN--REANMLFLETPIGVGFSYSKDASSYQGVGDKITAR 152 (464)
Q Consensus 75 ~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~--~~an~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~ 152 (464)
-.|| |.++|=||+=--+ ...=|..-+ ++.++=. -..+||-=-.| |-|||-..+..++ +..++|.
T Consensus 152 v~Pl-Ll~HGwPGsv~EF----ykfIPlLT~-----p~~hg~~~d~~FEVI~PSlP-GygwSd~~sk~GF---n~~a~Ar 217 (469)
T KOG2565|consen 152 VKPL-LLLHGWPGSVREF----YKFIPLLTD-----PKRHGNESDYAFEVIAPSLP-GYGWSDAPSKTGF---NAAATAR 217 (469)
T ss_pred ccce-EEecCCCchHHHH----HhhhhhhcC-----ccccCCccceeEEEeccCCC-CcccCcCCccCCc---cHHHHHH
Confidence 3465 5589999944322 222233222 2222222 14556666667 9999988777666 5567776
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCcc
Q 012396 153 DNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (464)
Q Consensus 153 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp~ 217 (464)
-+...+- ++.-++|||=|--||.....-+|... +-|+.|+=+-+..+.+.
T Consensus 218 vmrkLMl-------RLg~nkffiqGgDwGSiI~snlasLy--------PenV~GlHlnm~~~~s~ 267 (469)
T KOG2565|consen 218 VMRKLML-------RLGYNKFFIQGGDWGSIIGSNLASLY--------PENVLGLHLNMCFVNSP 267 (469)
T ss_pred HHHHHHH-------HhCcceeEeecCchHHHHHHHHHhhc--------chhhhHhhhcccccCCc
Confidence 5554332 34556899977666655444444433 33677776666655543
No 207
>PLN02561 triosephosphate isomerase
Probab=28.39 E-value=1.2e+02 Score=28.93 Aligned_cols=58 Identities=17% Similarity=0.225 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHHHHH-CCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 150 TARDNLVFLKNWFLK-FPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 150 ~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
.++++..+++.++.+ |..-....+-|. |||---|.=+..|.. ..++.|+.||.+.+|+
T Consensus 181 ~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~------~~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 181 QAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAA------QPDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhc------CCCCCeEEEehHhhHH
Confidence 466777888888764 432222233222 899999999988876 4479999999999987
No 208
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=28.38 E-value=79 Score=28.84 Aligned_cols=31 Identities=16% Similarity=0.175 Sum_probs=26.1
Q ss_pred ccEEEEEcCCCcccCchhHHHHHHHHHHhcC
Q 012396 370 IPVMVYSGDQDSVIPLTGSRKLVNGLAKELK 400 (464)
Q Consensus 370 irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~ 400 (464)
-+++|++|+.|.+||....+...+.|+.-.+
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~~~l~~~~~ 199 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIRDAMLKVYG 199 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHHHHHHHhcC
Confidence 3478999999999999999999998875433
No 209
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=28.02 E-value=1.7e+02 Score=32.84 Aligned_cols=29 Identities=17% Similarity=0.119 Sum_probs=25.2
Q ss_pred cCccEEEEEcCCCcccCchhHHHHHHHHH
Q 012396 368 AGIPVMVYSGDQDSVIPLTGSRKLVNGLA 396 (464)
Q Consensus 368 ~~irVLiy~Gd~D~i~n~~g~~~~i~~l~ 396 (464)
-.++||+.+|-.|..++..++.++.+.|+
T Consensus 454 IkvPvLlIhGw~D~~V~~~~s~~ly~aL~ 482 (767)
T PRK05371 454 IKASVLVVHGLNDWNVKPKQVYQWWDALP 482 (767)
T ss_pred CCCCEEEEeeCCCCCCChHHHHHHHHHHH
Confidence 45899999999999999999888888664
No 210
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=27.75 E-value=1.3e+02 Score=28.27 Aligned_cols=73 Identities=15% Similarity=0.313 Sum_probs=45.0
Q ss_pred cCccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEE-cCCcccccCCCc--
Q 012396 368 AGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATI-RGASHEAPFSQP-- 444 (464)
Q Consensus 368 ~~irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V-~gAGHmvP~DqP-- 444 (464)
-..+||+..|+.|-+||......|-+.++.. -.++-+++.|+. .+.-.+ +.+==-.|.|++
T Consensus 163 vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~---------------~~~~~~v~~f~g-~~HGf~~~r~~~~~Ped~~~~ 226 (242)
T KOG3043|consen 163 VKAPILFLFAELDEDVPPKDVKAWEEKLKEN---------------PAVGSQVKTFSG-VGHGFVARRANISSPEDKKAA 226 (242)
T ss_pred CCCCEEEEeecccccCCHHHHHHHHHHHhcC---------------cccceeEEEcCC-ccchhhhhccCCCChhHHHHH
Confidence 3479999999999999999999998866421 112233444432 211111 112223577765
Q ss_pred HHHHHHHHHHHc
Q 012396 445 ERSLVLFKAFLD 456 (464)
Q Consensus 445 ~~al~mi~~fl~ 456 (464)
++|++.+..|++
T Consensus 227 eea~~~~~~Wf~ 238 (242)
T KOG3043|consen 227 EEAYQRFISWFK 238 (242)
T ss_pred HHHHHHHHHHHH
Confidence 567888888875
No 211
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=27.29 E-value=64 Score=34.76 Aligned_cols=22 Identities=9% Similarity=0.200 Sum_probs=18.8
Q ss_pred CCCEEEEeeccccccHHHHHHH
Q 012396 170 NRSLFITGESYAGHYIPQLADL 191 (464)
Q Consensus 170 ~~~~yi~GESYgG~yvP~~a~~ 191 (464)
++++.|+|||+||.++-.|...
T Consensus 212 gkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHHh
Confidence 5789999999999888777664
No 212
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=26.73 E-value=29 Score=32.48 Aligned_cols=49 Identities=16% Similarity=0.034 Sum_probs=33.7
Q ss_pred HHHH-HCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCcc
Q 012396 160 NWFL-KFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (464)
Q Consensus 160 ~f~~-~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp~ 217 (464)
.|.+ .|+-...+ ..|+|.|+||.-+-.+|.+- +--+.+++..+|.+++.
T Consensus 104 p~i~~~~~~~~~~-~~i~G~S~GG~~Al~~~l~~--------Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 104 PYIEANYRTDPDR-RAIAGHSMGGYGALYLALRH--------PDLFGAVIAFSGALDPS 153 (251)
T ss_dssp HHHHHHSSEEECC-EEEEEETHHHHHHHHHHHHS--------TTTESEEEEESEESETT
T ss_pred hHHHHhcccccce-eEEeccCCCcHHHHHHHHhC--------ccccccccccCcccccc
Confidence 3444 35444333 89999999998776666542 22588888888888775
No 213
>PRK06762 hypothetical protein; Provisional
Probab=26.31 E-value=39 Score=29.51 Aligned_cols=16 Identities=13% Similarity=0.354 Sum_probs=13.5
Q ss_pred CEEEEECCCCCchhhh
Q 012396 77 PLVLWLNGGPGCSSLG 92 (464)
Q Consensus 77 Pl~lwlnGGPG~Ss~~ 92 (464)
|.+||+.|.|||.-..
T Consensus 2 ~~li~i~G~~GsGKST 17 (166)
T PRK06762 2 TTLIIIRGNSGSGKTT 17 (166)
T ss_pred CeEEEEECCCCCCHHH
Confidence 7899999999987653
No 214
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=26.05 E-value=75 Score=28.57 Aligned_cols=36 Identities=14% Similarity=0.235 Sum_probs=25.7
Q ss_pred CCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCc
Q 012396 170 NRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (464)
Q Consensus 170 ~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~ 213 (464)
.+|.||+++|-|+--+...+.++.. .++|+++..|.
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~--------~V~GalLVApp 93 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQR--------QVAGALLVAPP 93 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhh--------ccceEEEecCC
Confidence 5689999999996544444444422 68899988764
No 215
>COG1647 Esterase/lipase [General function prediction only]
Probab=24.91 E-value=1.3e+02 Score=28.23 Aligned_cols=60 Identities=18% Similarity=0.334 Sum_probs=45.2
Q ss_pred ccEEEEEcCCCcccCchhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCC-cHHHH
Q 012396 370 IPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQ-PERSL 448 (464)
Q Consensus 370 irVLiy~Gd~D~i~n~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~Dq-P~~al 448 (464)
.+++|..|..|-+++..+.+...+.+.. .+ .. | ....++||.+-.|. .+.+.
T Consensus 182 ~pt~vvq~~~D~mv~~~sA~~Iy~~v~s-------~~-----------------Ke-L--~~~e~SgHVIt~D~Erd~v~ 234 (243)
T COG1647 182 SPTLVVQGRQDEMVPAESANFIYDHVES-------DD-----------------KE-L--KWLEGSGHVITLDKERDQVE 234 (243)
T ss_pred cchhheecccCCCCCHHHHHHHHHhccC-------Cc-----------------ce-e--EEEccCCceeecchhHHHHH
Confidence 6899999999999999999888885420 00 01 3 66789999999995 55666
Q ss_pred HHHHHHHc
Q 012396 449 VLFKAFLD 456 (464)
Q Consensus 449 ~mi~~fl~ 456 (464)
+-+-+||.
T Consensus 235 e~V~~FL~ 242 (243)
T COG1647 235 EDVITFLE 242 (243)
T ss_pred HHHHHHhh
Confidence 67777775
No 216
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=24.74 E-value=1.9e+02 Score=27.38 Aligned_cols=57 Identities=19% Similarity=0.374 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHHHHH-CCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 150 TARDNLVFLKNWFLK-FPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 150 ~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
.++++..++++++.. +.+ ....+-|. |||---|.=+..+.+. -++.|+.+|.+.+++
T Consensus 177 ~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~------~~vDG~LVG~Asl~~ 234 (242)
T cd00311 177 QAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQ------PDIDGVLVGGASLKA 234 (242)
T ss_pred HHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcC------CCCCEEEeehHhhCH
Confidence 466778899988875 433 22333333 8999899888888772 269999999999875
No 217
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=24.31 E-value=1e+02 Score=28.31 Aligned_cols=125 Identities=14% Similarity=0.129 Sum_probs=53.0
Q ss_pred CCCEEEEECCCCCchhhhhhhhccCCCcccCCCcccccCCCccc-ccceEEEeCCCcc----ccCc---------ccCCC
Q 012396 75 SKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNR-EANMLFLETPIGV----GFSY---------SKDAS 140 (464)
Q Consensus 75 ~~Pl~lwlnGGPG~Ss~~~G~f~E~GP~~~~~~~~~~n~~sW~~-~an~l~iDqPvGt----GfSy---------~~~~~ 140 (464)
.+|-||-|+|.=..+.++ -. -.++++ ....+ .+..+|+|-|.-+ |... .....
T Consensus 3 ~k~riLcLHG~~~na~if-~~--q~~~l~----------~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIF-RQ--QTSALR----------KALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGP 69 (212)
T ss_dssp ---EEEEE--TT--HHHH-HH--HTHHHH----------HHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT-
T ss_pred CCceEEEeCCCCcCHHHH-HH--HHHHHH----------HHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCc
Confidence 478899999775554443 00 011111 12223 6788888888655 2221 11111
Q ss_pred CccccC------hHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 141 SYQGVG------DKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 141 ~~~~~~------~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
.+.+.. .....++.++.|.+++++..-| -=|.|-|=|+..+..++....+........++|-+++.+|+.
T Consensus 70 ~~~W~~~~~~~~~~~~~~~sl~~l~~~i~~~GPf----dGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~ 145 (212)
T PF03959_consen 70 FYSWWDPDDDDHEYEGLDESLDYLRDYIEENGPF----DGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFP 145 (212)
T ss_dssp -EESS---S-SGGG---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES---
T ss_pred ceeeeecCCCcccccCHHHHHHHHHHHHHhcCCe----EEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccC
Confidence 111111 1222345556677777664322 359999999998887777666533211245788888888876
Q ss_pred Cc
Q 012396 215 EF 216 (464)
Q Consensus 215 dp 216 (464)
-+
T Consensus 146 p~ 147 (212)
T PF03959_consen 146 PP 147 (212)
T ss_dssp -E
T ss_pred CC
Confidence 54
No 218
>PF04446 Thg1: tRNAHis guanylyltransferase; InterPro: IPR007537 The Thg1 protein from Saccharomyces cerevisiae (Baker's yeast) is responsible for adding a GMP residue to the 5' end of tRNA His [].; PDB: 3OTE_A 3OTC_A 3OTD_A 3OTB_A.
Probab=24.24 E-value=89 Score=26.77 Aligned_cols=52 Identities=17% Similarity=0.257 Sum_probs=34.8
Q ss_pred eEEEeCCCccccCcccCCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeecc
Q 012396 122 MLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESY 180 (464)
Q Consensus 122 ~l~iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESY 180 (464)
||-|| |.||+.-+..-.+..=+|+...+.|.+.-+..++.+++ ..+..|+|=
T Consensus 23 vvRiD---G~~F~kft~~~~f~KP~D~r~~~~M~~aa~~l~~~~~~----~~~aY~~SD 74 (135)
T PF04446_consen 23 VVRID---GRGFHKFTKRHGFEKPNDERFLKAMNEAAKALMEEFPD----IVLAYGQSD 74 (135)
T ss_dssp EEEEE---ETTHHHHHHHTT--SS--HHHHHHHHHHHHHHHHHSSS----EEEEEEETT
T ss_pred EEEEe---CcchhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhCCC----cEEEEEcCC
Confidence 78899 99999633322233336788888888888888888863 567777773
No 219
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=24.04 E-value=37 Score=22.67 Aligned_cols=16 Identities=31% Similarity=0.341 Sum_probs=13.6
Q ss_pred hhhccCcHHHHHHhcc
Q 012396 317 TVNYLNRKDVQKALHA 332 (464)
Q Consensus 317 ~~~YLN~~~Vr~aLhv 332 (464)
+-.-|++|+||++|++
T Consensus 16 l~~~l~DpdvqrgL~~ 31 (42)
T PF07849_consen 16 LLRALRDPDVQRGLGF 31 (42)
T ss_pred HHHHHcCHHHHHHHHH
Confidence 4566999999999986
No 220
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=22.81 E-value=2.3e+02 Score=27.04 Aligned_cols=58 Identities=17% Similarity=0.311 Sum_probs=41.5
Q ss_pred HhHHHHHHHHHHHHHH-CCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCc
Q 012396 149 ITARDNLVFLKNWFLK-FPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (464)
Q Consensus 149 ~~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp 216 (464)
+.++++..+++.++.. +.+ ....+-|. |||---|.=+..+.. ..++.|+.||.+.+++
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~------~~~vDG~LVG~Asl~~ 238 (250)
T PRK00042 180 EQAQEVHAFIRAVLAELYGE-VAEKVRIL---YGGSVKPDNAAELMA------QPDIDGALVGGASLKA 238 (250)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCCceEE---EcCCCCHHHHHHHhc------CCCCCEEEEeeeeech
Confidence 3566778889988864 321 12233222 999999999988876 4479999999999876
No 221
>PRK10115 protease 2; Provisional
Probab=21.71 E-value=1.8e+02 Score=32.28 Aligned_cols=28 Identities=29% Similarity=0.364 Sum_probs=25.0
Q ss_pred Ccc-EEEEEcCCCcccCchhHHHHHHHHH
Q 012396 369 GIP-VMVYSGDQDSVIPLTGSRKLVNGLA 396 (464)
Q Consensus 369 ~ir-VLiy~Gd~D~i~n~~g~~~~i~~l~ 396 (464)
.++ +||.+|..|..|+..-.++|...|+
T Consensus 605 ~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr 633 (686)
T PRK10115 605 AYPHLLVTTGLHDSQVQYWEPAKWVAKLR 633 (686)
T ss_pred CCCceeEEecCCCCCcCchHHHHHHHHHH
Confidence 478 6788999999999999999999885
No 222
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=21.68 E-value=66 Score=29.42 Aligned_cols=40 Identities=15% Similarity=0.272 Sum_probs=25.7
Q ss_pred EEeeccccccHHHHHHHHHHhccccccccceeeecCCCcc
Q 012396 175 ITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (464)
Q Consensus 175 i~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~ 214 (464)
++|-+..-+.+-.+|+.+.+..-..-.+|++||.=-.|-.
T Consensus 39 l~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~f 78 (210)
T COG2945 39 LFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEF 78 (210)
T ss_pred cccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcc
Confidence 4566677777888888877633222268999987555443
No 223
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=21.34 E-value=1e+02 Score=29.66 Aligned_cols=37 Identities=22% Similarity=0.186 Sum_probs=25.6
Q ss_pred CCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCc
Q 012396 171 RSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (464)
Q Consensus 171 ~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~ 213 (464)
.++-++|||-||+-+=++|.... ..+++..++-.+|+
T Consensus 120 ~klal~GHSrGGktAFAlALg~a------~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 120 SKLALSGHSRGGKTAFALALGYA------TSLKFSALIGIDPV 156 (307)
T ss_pred ceEEEeecCCccHHHHHHHhccc------ccCchhheeccccc
Confidence 46999999999998877776443 14556665555554
No 224
>PF14020 DUF4236: Protein of unknown function (DUF4236)
Probab=21.20 E-value=73 Score=22.70 Aligned_cols=15 Identities=33% Similarity=0.625 Sum_probs=11.8
Q ss_pred ceEEEeCCCccccCcc
Q 012396 121 NMLFLETPIGVGFSYS 136 (464)
Q Consensus 121 n~l~iDqPvGtGfSy~ 136 (464)
--+-++-| |+|+||.
T Consensus 40 ~~~t~~iP-GtGlsyr 54 (55)
T PF14020_consen 40 RRTTVGIP-GTGLSYR 54 (55)
T ss_pred cEEEEEcC-CCccEEe
Confidence 34668889 9999985
No 225
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=21.19 E-value=1.4e+02 Score=28.44 Aligned_cols=50 Identities=12% Similarity=0.149 Sum_probs=34.8
Q ss_pred CccEEEEEcCCCcccCc-hhHHHHHHHHHHhcCCCccccceeeecCceeeeEEEEeCCeeEEEEEcCCcccccCCC
Q 012396 369 GIPVMVYSGDQDSVIPL-TGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQ 443 (464)
Q Consensus 369 ~irVLiy~Gd~D~i~n~-~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~v~Gy~k~~~n~Ltfv~V~gAGHmvP~Dq 443 (464)
..+++|.+|..|..++. ...+.+.+.|+ +.+ .+ .++.+..|+||--....
T Consensus 211 ~~plli~~G~~D~~v~~~~~~~~~~~~l~-~~g-----------------------~~-v~~~~~~g~~H~f~~~~ 261 (275)
T TIGR02821 211 HSTILIDQGTADQFLDEQLRPDAFEQACR-AAG-----------------------QA-LTLRRQAGYDHSYYFIA 261 (275)
T ss_pred CCCeeEeecCCCcccCccccHHHHHHHHH-HcC-----------------------CC-eEEEEeCCCCccchhHH
Confidence 46899999999999998 45555555443 111 13 77888899999765443
No 226
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=21.08 E-value=3.5e+02 Score=28.45 Aligned_cols=114 Identities=18% Similarity=0.368 Sum_probs=67.4
Q ss_pred eEEEEEEecCCCCCCCCEEEEECCCCCchhhhhhhhc--cC-CCcccCCCcccccCCCcccccceEEEeCCCccccCccc
Q 012396 61 ALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFS--EN-GPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSK 137 (464)
Q Consensus 61 ~lfy~f~es~~~~~~~Pl~lwlnGGPG~Ss~~~G~f~--E~-GP~~~~~~~~~~n~~sW~~~an~l~iDqPvGtGfSy~~ 137 (464)
.++|+|-+-. -.-||.|+|.|==.+-+.. |.|+ .+ .|| ||+=|+-+--|==|.
T Consensus 277 Ei~yYFnPGD---~KPPL~VYFSGyR~aEGFE-gy~MMk~Lg~Pf-------------------LL~~DpRleGGaFYl- 332 (511)
T TIGR03712 277 EFIYYFNPGD---FKPPLNVYFSGYRPAEGFE-GYFMMKRLGAPF-------------------LLIGDPRLEGGAFYL- 332 (511)
T ss_pred eeEEecCCcC---CCCCeEEeeccCcccCcch-hHHHHHhcCCCe-------------------EEeeccccccceeee-
Confidence 3555554421 3469999999944455554 4443 22 343 567775555552232
Q ss_pred CCCCccccChHHhHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHHhccccccccceeeecCCCccCcc
Q 012396 138 DASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (464)
Q Consensus 138 ~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~inLkGi~IGng~~dp~ 217 (464)
.++.| =+.+.+.+++-++.. .|+.+++.|.|-|+|..=+-+.+. .++=.+|++|=|+++-.
T Consensus 333 Gs~ey--------E~~I~~~I~~~L~~L-gF~~~qLILSGlSMGTfgAlYYga----------~l~P~AIiVgKPL~NLG 393 (511)
T TIGR03712 333 GSDEY--------EQGIINVIQEKLDYL-GFDHDQLILSGLSMGTFGALYYGA----------KLSPHAIIVGKPLVNLG 393 (511)
T ss_pred CcHHH--------HHHHHHHHHHHHHHh-CCCHHHeeeccccccchhhhhhcc----------cCCCceEEEcCcccchh
Confidence 11122 224455666666654 578899999999998653333333 35677899999888653
No 227
>COG3896 Chloramphenicol 3-O-phosphotransferase [Defense mechanisms]
Probab=20.36 E-value=60 Score=28.77 Aligned_cols=27 Identities=37% Similarity=0.594 Sum_probs=21.3
Q ss_pred CCEEEEECCCC--CchhhhhhhhccC--CCcc
Q 012396 76 KPLVLWLNGGP--GCSSLGVGAFSEN--GPFR 103 (464)
Q Consensus 76 ~Pl~lwlnGGP--G~Ss~~~G~f~E~--GP~~ 103 (464)
.--|+.||||| |-||+. -.|+|+ ||+.
T Consensus 22 ~griVlLNG~~saGKSSiA-~A~Q~~~a~pwm 52 (205)
T COG3896 22 EGRIVLLNGGSSAGKSSIA-LAFQDLAAEPWM 52 (205)
T ss_pred CceEEEecCCCccchhHHH-HHHHHHhhcchh
Confidence 44588899998 668887 888886 8875
No 228
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=20.18 E-value=87 Score=26.54 Aligned_cols=20 Identities=35% Similarity=0.374 Sum_probs=16.7
Q ss_pred CCCCCEEEEECCCCCchhhh
Q 012396 73 PASKPLVLWLNGGPGCSSLG 92 (464)
Q Consensus 73 ~~~~Pl~lwlnGGPG~Ss~~ 92 (464)
..++|||+=|+|.||+.-..
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~ 68 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNF 68 (127)
T ss_pred CCCCCEEEEeecCCCCcHHH
Confidence 45699999999999987664
Done!