BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012397
(464 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359475690|ref|XP_003631732.1| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
gi|296087508|emb|CBI34097.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/429 (79%), Positives = 387/429 (90%), Gaps = 1/429 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L++YN+MTQQKE+F P+V GKV MYVCGVTAYDLSHLGHARAAV FD+LYRYL+HL EV
Sbjct: 7 LRVYNTMTQQKEIFKPVVDGKVSMYVCGVTAYDLSHLGHARAAVCFDVLYRYLQHLGYEV 66
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRNFTDVDDKIIRRAN+LGENPL+LS+R+CQEYL DM DLQCL PT QPRVSDHM+QI
Sbjct: 67 TYVRNFTDVDDKIIRRANELGENPLTLSSRFCQEYLDDMTDLQCLTPTQQPRVSDHMDQI 126
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
KDMITQIINNDCAY+++GDV+FAV+KSPNYGRLSG++LE+NRAGERVAVDSRKRNPADFA
Sbjct: 127 KDMITQIINNDCAYIIDGDVYFAVDKSPNYGRLSGRKLEDNRAGERVAVDSRKRNPADFA 186
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK EPSWDSPWGPGRPGWHIECSAMSAHYL+ KFDIHGGGIDLIFPHHENEIAQS
Sbjct: 187 LWKAAKPDEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIFPHHENEIAQS 246
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAACQ+SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT+ YHPLALR+FL+ HYRSP+
Sbjct: 247 CAACQESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITDLYHPLALRYFLLGTHYRSPV 306
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE-HGKTARINPAAEDCINKLRDEFHARM 377
NYS+ QL+ AS+AVFYIYQTL+DCE LSPFQE +G+ I PAA+DCI+KL+ +F +M
Sbjct: 307 NYSIAQLEIASEAVFYIYQTLRDCEDTLSPFQEVNGQNVCITPAAKDCISKLQTDFQTKM 366
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
SDDL+T HIL + Q+AL+FINS LNMLKKKQ KQQQLS ++SL ++E EVK VL +LGL
Sbjct: 367 SDDLSTPHILNASLQEALRFINSGLNMLKKKQQKQQQLSAVQSLTELEKEVKGVLSVLGL 426
Query: 438 LPPGAYSEV 446
L AYSEV
Sbjct: 427 LSTLAYSEV 435
>gi|224111652|ref|XP_002315932.1| predicted protein [Populus trichocarpa]
gi|222864972|gb|EEF02103.1| predicted protein [Populus trichocarpa]
Length = 532
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/437 (78%), Positives = 385/437 (88%), Gaps = 9/437 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YNSMTQQKE+F + GKV MYVCGVT+YD SHLGHARAAV+FD+L+RYL+HL EV
Sbjct: 7 LKLYNSMTQQKEVFKSRIPGKVSMYVCGVTSYDFSHLGHARAAVAFDILFRYLQHLGYEV 66
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRNFTD+DDKIIRRAN++GE+PLSLS+R+C+EYLVDM DLQCL PT+QPRV+DH+EQI
Sbjct: 67 TYVRNFTDIDDKIIRRANEIGEDPLSLSSRFCEEYLVDMTDLQCLIPTHQPRVTDHVEQI 126
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
KDMITQII DCAY VEGDVFFAV KSPNYG+LSGQRLENNRAGERVAVDSRKRNPADFA
Sbjct: 127 KDMITQIIEKDCAYAVEGDVFFAVNKSPNYGQLSGQRLENNRAGERVAVDSRKRNPADFA 186
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEPSW+SPWGPGRPGWHIECSAMSA YL+ KFDIHGGGIDLIFPHHENEIAQS
Sbjct: 187 LWKAAKPGEPSWESPWGPGRPGWHIECSAMSAQYLTFKFDIHGGGIDLIFPHHENEIAQS 246
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAAC++S+VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL
Sbjct: 247 CAACEESSVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 306
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE------HGKTAR---INPAAEDCINKL 369
NYSV QL+S+SDAVFYIYQTLQDCE AL PFQE G+ A I A+ CI++L
Sbjct: 307 NYSVSQLESSSDAVFYIYQTLQDCEDALLPFQEGSLKEGAGQNANLVAITADAQKCISRL 366
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
++F +MSDDLNTS +LTGAFQ+ALK +N SL MLKKKQ K+QQLSLI S+ +++ EV
Sbjct: 367 HEDFETKMSDDLNTSPLLTGAFQEALKVVNGSLGMLKKKQQKKQQLSLIRSVTEVKKEVT 426
Query: 430 EVLRILGLLPPGAYSEV 446
EVLRILGL PP +EV
Sbjct: 427 EVLRILGLFPPCTCAEV 443
>gi|359496172|ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
gi|297735988|emb|CBI23962.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/429 (79%), Positives = 381/429 (88%), Gaps = 1/429 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L++YN+MTQQKE+ P+V GKV MYVCGVTAYDLSHLGH RAAVSFD+LYRYL+HL EV
Sbjct: 7 LRVYNTMTQQKEILKPVVDGKVSMYVCGVTAYDLSHLGHGRAAVSFDVLYRYLQHLGYEV 66
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRNFTDVDDKIIRRAN+LGENPL+LS+ +CQEYL DM DL CL PT+QPRVSDHM+QI
Sbjct: 67 TYVRNFTDVDDKIIRRANELGENPLTLSSHFCQEYLDDMTDLHCLSPTHQPRVSDHMDQI 126
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
KDMITQIINNDCAY ++GDV+FAV+KSPNYGRLSG++LENNRAGERVAVDSRKRNPADFA
Sbjct: 127 KDMITQIINNDCAYTIDGDVYFAVDKSPNYGRLSGRKLENNRAGERVAVDSRKRNPADFA 186
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEPSWDSPWGPGRPGWHIECSAMSAHYL+ KFDIHGGGIDLIFPHHENEIAQS
Sbjct: 187 LWKAAKPGEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIFPHHENEIAQS 246
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAACQ+SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT+ YHPLALR+FL+ HYRSP+
Sbjct: 247 CAACQESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITDLYHPLALRYFLLGTHYRSPV 306
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE-HGKTARINPAAEDCINKLRDEFHARM 377
NYS+ QL+ AS+AVFYIYQTL+DCE LS FQE +G+ I PAA+DCI L+ +F +M
Sbjct: 307 NYSIAQLEIASEAVFYIYQTLRDCEDTLSLFQEVNGRNVCIAPAAQDCIRTLQTDFQTKM 366
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
SDDL+T HIL + Q+AL+FINS LNMLKKKQ KQQQLS +ESL K+ EVK VL +LGL
Sbjct: 367 SDDLSTPHILNASLQEALRFINSCLNMLKKKQQKQQQLSAVESLTKLGKEVKGVLSVLGL 426
Query: 438 LPPGAYSEV 446
L AYSEV
Sbjct: 427 LSTLAYSEV 435
>gi|449464950|ref|XP_004150192.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
gi|449508099|ref|XP_004163218.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 562
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/437 (77%), Positives = 381/437 (87%), Gaps = 9/437 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++YNSMTQQKE+FT GKVGMYVCG+TAYD SH+GHARAAV+FD+LYRYL+HL EV
Sbjct: 6 FRVYNSMTQQKEVFTTKEPGKVGMYVCGITAYDFSHIGHARAAVNFDVLYRYLKHLGYEV 65
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRNFTDVDDKIIRRAN+ GENP +LS+R+CQEYL DMADLQCL PT+QPRVSDH+EQI
Sbjct: 66 TYVRNFTDVDDKIIRRANESGENPFALSDRFCQEYLSDMADLQCLSPTHQPRVSDHLEQI 125
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
KDMITQII N Y V+GDVFF+V+K PNYG+LSGQ+LEN+RAGERVAVDSRK NPADFA
Sbjct: 126 KDMITQIIKNGYGYAVDGDVFFSVDKFPNYGQLSGQKLENHRAGERVAVDSRKNNPADFA 185
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEPSW+SPWGPGRPGWHIECSAMSAHYL+ KFDIHGGGIDLIFPHHENE+AQS
Sbjct: 186 LWKAAKPGEPSWESPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIFPHHENEVAQS 245
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAACQ+S +SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL LRHFLISAHYRSPL
Sbjct: 246 CAACQESKISYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLVLRHFLISAHYRSPL 305
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH------GKTARINP---AAEDCINKL 369
NY+V QLDSASD V+YIYQT+QDCE ALS Q GKT + +P AAE+CI L
Sbjct: 306 NYTVSQLDSASDTVYYIYQTMQDCEDALSQHQGENLSDGLGKTGKKDPVSSAAEECIINL 365
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
R EF RM+DDLNT+HILTGAFQ+ALKFINS+L LKKKQPK+QQLS+I+SL ++ E++
Sbjct: 366 RSEFQTRMADDLNTAHILTGAFQEALKFINSTLTSLKKKQPKKQQLSMIQSLVNVKKELR 425
Query: 430 EVLRILGLLPPGAYSEV 446
EVL +LGLL YSEV
Sbjct: 426 EVLDVLGLLSTSTYSEV 442
>gi|255585350|ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
gi|223526794|gb|EEF29017.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
Length = 530
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/439 (75%), Positives = 376/439 (85%), Gaps = 10/439 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ K+YN+M +Q E F P V GKVGMYVCGVTAY SH+GHARAAV FD+L+RYL+HL
Sbjct: 5 VEFKLYNTMNRQLEAFKPHVPGKVGMYVCGVTAYAFSHIGHARAAVIFDVLFRYLQHLGY 64
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTY RNFTD+DDKII+RAN+ GE+P SLS+R+C+EYLVDM LQCL PT+QPRV+DH+E
Sbjct: 65 EVTYARNFTDIDDKIIKRANESGEDPFSLSSRFCEEYLVDMDSLQCLRPTHQPRVTDHIE 124
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
QIKDMITQIINN AY EGDVFFAV+K PNYG+LSGQ+LEN+RAGER D+RKRNPAD
Sbjct: 125 QIKDMITQIINNGFAYPSEGDVFFAVDKFPNYGQLSGQKLENHRAGERNP-DTRKRNPAD 183
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GEPSW+SPWGPGRPGWHIECSAMSA YL+ KFDIHGGG DLIFPHHENEI
Sbjct: 184 FALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAQYLTFKFDIHGGGSDLIFPHHENEIT 243
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AACQ+SNVSYW+HNGHVTNNNEKMSKSLGN+FTIR++TERYHPLA+RHFLISAHYRS
Sbjct: 244 QSAAACQESNVSYWIHNGHVTNNNEKMSKSLGNYFTIREVTERYHPLAVRHFLISAHYRS 303
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ---------EHGKTARINPAAEDCIN 367
PLNY+V QL+SASDA+FYIYQTLQDCE ALS FQ ++ K I A+ CIN
Sbjct: 304 PLNYTVFQLESASDAIFYIYQTLQDCEDALSMFQDGSLKEGAAQNSKVVGITADAKKCIN 363
Query: 368 KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENE 427
KLRDEF +MSDDL+TSHILTGAFQDALKFINSS++MLKKK K QQLSLI+SL +IE E
Sbjct: 364 KLRDEFETKMSDDLSTSHILTGAFQDALKFINSSISMLKKKLQKPQQLSLIQSLTEIERE 423
Query: 428 VKEVLRILGLLPPGAYSEV 446
+K VL ILGLLPPG Y+E+
Sbjct: 424 IKLVLNILGLLPPGTYAEI 442
>gi|356575566|ref|XP_003555910.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 553
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/433 (73%), Positives = 371/433 (85%), Gaps = 5/433 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+IYNSM+QQKE+F V GKV MYVCGVTAYD SHLGHARAAVSFD+L+RYL+HL E+
Sbjct: 8 FRIYNSMSQQKEIFKTKVPGKVSMYVCGVTAYDFSHLGHARAAVSFDILFRYLKHLDYEI 67
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRNFTDVDDKII+RAN+ GE+PL LSNR+C EY DMADLQC P+ +PRVS+H+ +I
Sbjct: 68 TYVRNFTDVDDKIIKRANETGEDPLMLSNRFCDEYNADMADLQCKTPSKEPRVSEHLNEI 127
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
KDMITQII+N AY V+GDVF+AV+K PNYG LSGQRLE+NRAGERVAVDSRKR+PADFA
Sbjct: 128 KDMITQIISNGYAYEVDGDVFYAVDKCPNYGMLSGQRLEHNRAGERVAVDSRKRHPADFA 187
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEPSWDSPWGPGRPGWHIECSAMSA YL+ KFDIHGGGIDLIFPHHENEIAQS
Sbjct: 188 LWKAAKPGEPSWDSPWGPGRPGWHIECSAMSACYLTHKFDIHGGGIDLIFPHHENEIAQS 247
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +S+VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL
Sbjct: 248 WAADHESHVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 307
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPF-----QEHGKTARINPAAEDCINKLRDEF 373
NYS+ QL+++SDA++YI+QTLQDC+ A+SP +++ K +IN AA++CI KL EF
Sbjct: 308 NYSISQLENSSDAIYYIFQTLQDCKDAVSPLLQGETEKNEKVPQINEAAKECIKKLNVEF 367
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
+MSDDL T ILTGA Q+ALKF+N+SL MLKKK K+ QL LI+SL ++E EV +VL
Sbjct: 368 QTKMSDDLQTPVILTGALQEALKFVNTSLKMLKKKMQKRAQLQLIQSLLEVEKEVGKVLD 427
Query: 434 ILGLLPPGAYSEV 446
+LGLL +Y+EV
Sbjct: 428 VLGLLSSKSYAEV 440
>gi|356536300|ref|XP_003536677.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 548
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/433 (73%), Positives = 369/433 (85%), Gaps = 5/433 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+IYNSMTQQKE+F V GKV MYVCGVTAYD SHLGHARAAVSFD+L+RYL+HL E+
Sbjct: 8 FRIYNSMTQQKEIFKTKVPGKVSMYVCGVTAYDFSHLGHARAAVSFDILFRYLKHLGYEI 67
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRNFTDVDDKII+RAN+ GE+PL LSNR+C EY DMADLQC P+ +PRVS+H+ +I
Sbjct: 68 TYVRNFTDVDDKIIKRANETGEDPLMLSNRFCDEYNADMADLQCETPSREPRVSEHLNEI 127
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
KDMITQIINN AY V+GDVF+AV+K PNYG LSGQRLE+NRAGERVAVDSRKR+PADFA
Sbjct: 128 KDMITQIINNGYAYEVDGDVFYAVDKCPNYGMLSGQRLEHNRAGERVAVDSRKRHPADFA 187
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEPSWDSPWGPGRPGWHIECSAMSA YL+ KFDIHGGGIDLIFPHHENEIAQS
Sbjct: 188 LWKAAKPGEPSWDSPWGPGRPGWHIECSAMSACYLTHKFDIHGGGIDLIFPHHENEIAQS 247
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA DS+VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYH LALRHFLISAHYRSPL
Sbjct: 248 WAADHDSHVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHSLALRHFLISAHYRSPL 307
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPF-----QEHGKTARINPAAEDCINKLRDEF 373
NYS+ QL+++SDA++YI+QTLQDC+ A+SP +++ K +IN AA++CI KL EF
Sbjct: 308 NYSISQLENSSDAIYYIFQTLQDCKDAVSPLLQGETEKNEKVPQINEAAKECIKKLNVEF 367
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
+MSDDL T ILTGA Q+ALKF+N+SL MLKKK K+ QL LI+SL ++E V +VL
Sbjct: 368 QTKMSDDLQTPVILTGALQEALKFVNTSLKMLKKKMQKRAQLQLIQSLLEVEKVVGKVLD 427
Query: 434 ILGLLPPGAYSEV 446
+LGLL +Y+EV
Sbjct: 428 VLGLLSSKSYAEV 440
>gi|357444709|ref|XP_003592632.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
gi|355481680|gb|AES62883.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
Length = 552
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/435 (72%), Positives = 367/435 (84%), Gaps = 5/435 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LK+YNSM +KE+F P V GKV MYVCGVTAYDLSHLGHARAAVSFD+L+RYL+HL
Sbjct: 14 VELKLYNSMNNEKEIFNPKVAGKVSMYVCGVTAYDLSHLGHARAAVSFDILFRYLKHLDY 73
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRNFTDVDDKII RAN+ G +P LS +C EY VDM+DL C PT +PRVSDH++
Sbjct: 74 EVTYVRNFTDVDDKIINRANEKGVDPFELSRHFCDEYNVDMSDLLCERPTKEPRVSDHID 133
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
QIKDMITQIINND AY V GDVF++VEK PNYG LSGQRLE+NRAGERVAVDSRK +PAD
Sbjct: 134 QIKDMITQIINNDYAYEVNGDVFYSVEKCPNYGALSGQRLEHNRAGERVAVDSRKHHPAD 193
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GEPSWDSPWGPGRPGWHIECSAMSA YLS KFDIHGGGIDLIFPHHENEIA
Sbjct: 194 FALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSACYLSHKFDIHGGGIDLIFPHHENEIA 253
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA ++S++SYW+HNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS
Sbjct: 254 QSWAADKESHISYWLHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 313
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPF-----QEHGKTARINPAAEDCINKLRD 371
PLNYS+ QL+++SDA++YI+QTL+DC LS F ++ K IN AA++CI KL+D
Sbjct: 314 PLNYSITQLETSSDAIYYIFQTLEDCRDTLSSFLQEDTEKKEKVPPINDAAKECIKKLKD 373
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
EF +MSDDL T ILTGA Q+ALKF+N SL MLKKK K+ QL L++SL ++E E +E+
Sbjct: 374 EFQTKMSDDLQTPVILTGALQEALKFMNGSLKMLKKKMQKRAQLQLVQSLLEVEKEAREI 433
Query: 432 LRILGLLPPGAYSEV 446
L++LGLL +Y+EV
Sbjct: 434 LKVLGLLSSLSYAEV 448
>gi|15241557|ref|NP_198699.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|192807340|gb|ACF06122.1| At5g38830 [Arabidopsis thaliana]
gi|332006981|gb|AED94364.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 511
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 303/441 (68%), Positives = 365/441 (82%), Gaps = 7/441 (1%)
Query: 10 VAAPKMDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYR 69
+ A KM+L K+YN+MTQQKE+ PI GK+G+YVCG+TAYD SH+GHARAAVSFD+LYR
Sbjct: 1 MEAEKMEL--KLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYR 58
Query: 70 YLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQP 129
YL+HL +VT+VRNFTDVDDKII RAN GE+PL LSNR+C EYLVDM LQCLPPT+QP
Sbjct: 59 YLKHLDYDVTFVRNFTDVDDKIIDRANKNGEDPLDLSNRFCDEYLVDMGALQCLPPTHQP 118
Query: 130 RVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS 189
RVS+HM+ I MI +II DC YVVEGDVFF+V+KSPNYG+LSGQ LE+ RAGERVAVDS
Sbjct: 119 RVSEHMDNIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAVDS 178
Query: 190 RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFP 249
RKRNPADFALWKAAK EPSW+SPWGPGRPGWHIECSAMS HYLS KFDIHGGG DL FP
Sbjct: 179 RKRNPADFALWKAAKPDEPSWESPWGPGRPGWHIECSAMSVHYLSPKFDIHGGGADLKFP 238
Query: 250 HHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFL 309
HHENEIAQ+CAAC+DS V+YW+HNGHVT NNEKM+KS NF TIR+IT YHPLALRHFL
Sbjct: 239 HHENEIAQTCAACEDSGVNYWLHNGHVTINNEKMAKSKHNFKTIREITASYHPLALRHFL 298
Query: 310 ISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ----EHGKTARINPAAEDC 365
+SA YRSPL+++ QL+S+S+A++Y+YQTLQD + LSP+Q E G + +D
Sbjct: 299 MSAQYRSPLSFTASQLESSSEALYYVYQTLQDLDEGLSPYQDALSEDGGKSEQTAEGKDI 358
Query: 366 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 425
I KL+ EF ++M DDLNT+HILTGA+QDALKFIN+SL+ LKK Q K+Q++S++ SL +IE
Sbjct: 359 IKKLKTEFESKMLDDLNTAHILTGAYQDALKFINASLSKLKKMQ-KKQRMSMLVSLVEIE 417
Query: 426 NEVKEVLRILGLLPPGAYSEV 446
+EVL +LGLL +Y+E+
Sbjct: 418 KAAREVLDVLGLLTTLSYAEI 438
>gi|297801734|ref|XP_002868751.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314587|gb|EFH45010.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust.
Identities = 305/441 (69%), Positives = 366/441 (82%), Gaps = 7/441 (1%)
Query: 10 VAAPKMDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYR 69
+ A KM+L K+YN+MTQQKE+ PI GK+G+YVCG+TAYD SH+GHARAAVSFD+LYR
Sbjct: 1 MEAEKMEL--KLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYR 58
Query: 70 YLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQP 129
YL+HL EV +VRNFTDVDDKII RAN+ GE+PL LSNR+C+EYLVDM LQCL PT+QP
Sbjct: 59 YLKHLGYEVNFVRNFTDVDDKIIIRANENGEDPLDLSNRFCEEYLVDMGALQCLLPTHQP 118
Query: 130 RVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS 189
RVS+HM+ I MI +II DC YVVEGDVFF+V+KSPNYG+LSGQ LE+ RAGERVAVDS
Sbjct: 119 RVSEHMDHIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAVDS 178
Query: 190 RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFP 249
RKRNPADFALWKAAK EPSW+SPWGPGRPGWHIECSAMSAHYLS KFDIHGGG DL FP
Sbjct: 179 RKRNPADFALWKAAKPEEPSWESPWGPGRPGWHIECSAMSAHYLSPKFDIHGGGADLKFP 238
Query: 250 HHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFL 309
HHENEIAQ+CAAC+DS V+YW+HNGHVT NNEKM+KS NF TIR+IT YHPLALRHFL
Sbjct: 239 HHENEIAQTCAACEDSGVNYWLHNGHVTINNEKMAKSKKNFKTIREITASYHPLALRHFL 298
Query: 310 ISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ----EHGKTARINPAAEDC 365
+SA YRSPL++S QL+S+SDA++Y+YQTLQD + LSP++ E G A P +D
Sbjct: 299 MSAQYRSPLSFSASQLESSSDALYYVYQTLQDLDEDLSPYREALSEDGGKAEQTPEGKDI 358
Query: 366 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 425
I KL+ EF ++M DDLNT+HILTGA+QDALKFIN++ + LKK Q K+Q++S++ SL +IE
Sbjct: 359 IKKLKSEFESKMLDDLNTAHILTGAYQDALKFINANRSKLKKMQ-KKQRMSMLVSLVEIE 417
Query: 426 NEVKEVLRILGLLPPGAYSEV 446
+EVL +LGLL +Y+EV
Sbjct: 418 KAAREVLDVLGLLTTLSYAEV 438
>gi|9758060|dbj|BAB08639.1| cysteine-tRNA ligase [Arabidopsis thaliana]
Length = 500
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 296/441 (67%), Positives = 356/441 (80%), Gaps = 18/441 (4%)
Query: 10 VAAPKMDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYR 69
+ A KM+L K+YN+MTQQKE+ PI GK+G+YVCG+TAYD SH+GHARAAVSFD+LYR
Sbjct: 1 MEAEKMEL--KLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYR 58
Query: 70 YLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQP 129
YL+HL +VT+VRNFTDVDDKII RAN GE+PL LSNR+C EYLVDM LQCLPPT+QP
Sbjct: 59 YLKHLDYDVTFVRNFTDVDDKIIDRANKNGEDPLDLSNRFCDEYLVDMGALQCLPPTHQP 118
Query: 130 RVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS 189
RVS+HM+ I MI +II DC YVVEGDVFF+V+KSPNYG+LSGQ LE+ RAGERVAVDS
Sbjct: 119 RVSEHMDNIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAVDS 178
Query: 190 RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFP 249
RKRNPADFALWKAAK EPSW+SPWGPGRPGWHIECSAMS HYLS KFDIHGGG DL FP
Sbjct: 179 RKRNPADFALWKAAKPDEPSWESPWGPGRPGWHIECSAMSVHYLSPKFDIHGGGADLKFP 238
Query: 250 HHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFL 309
HHENEIAQ+CAAC+DS V+YW+HNGHVT NNEKM+KS NF TIR+IT YHPLALRHFL
Sbjct: 239 HHENEIAQTCAACEDSGVNYWLHNGHVTINNEKMAKSKHNFKTIREITASYHPLALRHFL 298
Query: 310 ISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ----EHGKTARINPAAEDC 365
+SA YRSPL+++ QL+S+S+A++ LSP+Q E G + +D
Sbjct: 299 MSAQYRSPLSFTASQLESSSEALY-----------CLSPYQDALSEDGGKSEQTAEGKDI 347
Query: 366 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 425
I KL+ EF ++M DDLNT+HILTGA+QDALKFIN+SL+ LKK Q K+Q++S++ SL +IE
Sbjct: 348 IKKLKTEFESKMLDDLNTAHILTGAYQDALKFINASLSKLKKMQ-KKQRMSMLVSLVEIE 406
Query: 426 NEVKEVLRILGLLPPGAYSEV 446
+EVL +LGLL +Y+E+
Sbjct: 407 KAAREVLDVLGLLTTLSYAEI 427
>gi|359476173|ref|XP_002285478.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
Length = 571
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 289/441 (65%), Positives = 348/441 (78%), Gaps = 7/441 (1%)
Query: 5 KETGTVAAPKMDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSF 64
K +G L +YN+M++QKE+F P V G+VGMYVCGVTAYDLSH+GHAR VSF
Sbjct: 61 KNSGGEGVENRRAELWLYNTMSRQKEVFKPKVDGRVGMYVCGVTAYDLSHIGHARVYVSF 120
Query: 65 DLLYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLP 124
D+LYRYL HL+ EV YVRNFTDVDDKII RAN++GE+P++LS RYCQE+ VDM L CLP
Sbjct: 121 DVLYRYLRHLEYEVNYVRNFTDVDDKIIARANEMGEDPINLSRRYCQEFHVDMTYLHCLP 180
Query: 125 PTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER 184
P+ +P VSDHM QI DMI QII+NDCAY VEGDV+F+V+K P YGRLSG+++E+NRAGER
Sbjct: 181 PSVEPCVSDHMPQIIDMIKQIIDNDCAYRVEGDVYFSVDKFPEYGRLSGRKVEDNRAGER 240
Query: 185 VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGI 244
VAVDSRK+NPADFALWKAAK GEP WDSPWGPGRPGWHIECSAMSA YL FDIHGGG+
Sbjct: 241 VAVDSRKKNPADFALWKAAKKGEPFWDSPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGM 300
Query: 245 DLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 304
DL+FPHHENEIAQSCAAC+ SN+SYW+HNG VT ++EKMSKSLGNFFTIRQ+ + YHPLA
Sbjct: 301 DLVFPHHENEIAQSCAACKQSNISYWIHNGFVTIDSEKMSKSLGNFFTIRQVIDIYHPLA 360
Query: 305 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED 364
LR FLI HYRSP+NYS +QL+SASD VFYIYQTL DC+ A+ + K + P D
Sbjct: 361 LRLFLIGTHYRSPINYSDVQLESASDRVFYIYQTLHDCQNAMDQ-DDMTKKDSVPPHILD 419
Query: 365 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 424
CINK ++F MSDDL+T +L A D LK IN ++L ++ K+Q+L L ESL +
Sbjct: 420 CINKFYNDFLTSMSDDLHTPVVL-AALSDPLKTIN---DLLHTRKGKKQELRL-ESLAAL 474
Query: 425 ENEVKEVLRILGLLPPGAYSE 445
E +++VL ILGL+ P +YSE
Sbjct: 475 EKVIRDVLTILGLM-PASYSE 494
>gi|224141927|ref|XP_002324312.1| predicted protein [Populus trichocarpa]
gi|222865746|gb|EEF02877.1| predicted protein [Populus trichocarpa]
Length = 493
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 274/421 (65%), Positives = 329/421 (78%), Gaps = 6/421 (1%)
Query: 25 MTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNF 84
M+++KELF P V GKVGMYVCGVTAYDLSH+GHAR V+FD+L RYL+HL +V YVRNF
Sbjct: 1 MSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGFDVHYVRNF 60
Query: 85 TDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQ 144
TDVDDKII RAN+LGE+P+SLS RYC+E+L DM L CLPP+ +PRVSDHM QI DMI +
Sbjct: 61 TDVDDKIIARANELGEDPISLSKRYCEEFLHDMVYLHCLPPSVEPRVSDHMPQIIDMIER 120
Query: 145 IINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAK 204
I+ N AY ++GDV+F+V+K P YGRLSG++LE+NRAGERVAVDSRK+NPADFALWK+AK
Sbjct: 121 ILENGYAYRIDGDVYFSVDKLPEYGRLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAK 180
Query: 205 AGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD 264
GEP WDSPWGPGRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQSCAAC+D
Sbjct: 181 EGEPFWDSPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACRD 240
Query: 265 SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQ 324
SN+SYW+HNG VT ++EKMSKSLGNFFTIRQ+ YHPLALR FL+ HYRSP+NYS +Q
Sbjct: 241 SNISYWVHNGFVTIDSEKMSKSLGNFFTIRQVINLYHPLALRLFLLGTHYRSPVNYSDVQ 300
Query: 325 LDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTS 384
L+SAS+ +FYIYQTL DCE LS + + I P + INK D MSDDL+T
Sbjct: 301 LESASERIFYIYQTLHDCENILSQHRVAFEKDAIPPDTINDINKFHDTLVTSMSDDLHTP 360
Query: 385 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 444
+L A D LK IN L+ K K +Q+ IES+ +E V+ L +LGL+PP Y+
Sbjct: 361 -VLLSALSDPLKIINDMLHTRKGK----KQIKRIESIAALEKMVRNALMVLGLMPP-TYN 414
Query: 445 E 445
E
Sbjct: 415 E 415
>gi|449437168|ref|XP_004136364.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 576
Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust.
Identities = 273/427 (63%), Positives = 334/427 (78%), Gaps = 6/427 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L ++N+M+++KE+F P V GKVGMYVCGVTAYDLSH+GHAR V+FD+LYRYL HL EV
Sbjct: 78 LWLHNTMSRKKEVFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYRYLRHLGYEV 137
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTDVDDKII RAN+LGE+PL+LS RYC+E+ DM L CLPP+ +P+VSDHM QI
Sbjct: 138 LYVRNFTDVDDKIIARANELGEDPLNLSRRYCEEFRRDMMYLHCLPPSVEPQVSDHMPQI 197
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
DMI QI++N AY V+GDV+F V+K P YG+LSG++LE+NRAGERV+VDSRK+NPADFA
Sbjct: 198 IDMIKQILDNGYAYSVDGDVYFNVDKFPEYGQLSGRKLEDNRAGERVSVDSRKKNPADFA 257
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEP W+SPWGPGRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQS
Sbjct: 258 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSASYLGYSFDIHGGGMDLVFPHHENEIAQS 317
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAAC+ SNVSYW+HNG VT ++EKMSKSLGNFFTIRQ+ + YHPLALR FL+ HYRSP+
Sbjct: 318 CAACRTSNVSYWVHNGFVTIDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLLGTHYRSPI 377
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
NYS L L+SASD +FYIYQTL DC +S E I P+ + INK + F MS
Sbjct: 378 NYSDLLLESASDRIFYIYQTLDDCRTVISQEDESSFKGPIAPSLVEEINKFSNVFLTSMS 437
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD++T +L A D LK IN ++L ++ K+Q+ + ESL +E + VL ILGL+
Sbjct: 438 DDIHTPVVL-AALSDPLKIIN---DLLHTRKGKKQEFRM-ESLAALEKIIGNVLSILGLM 492
Query: 439 PPGAYSE 445
P +YSE
Sbjct: 493 -PASYSE 498
>gi|357499285|ref|XP_003619931.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
gi|355494946|gb|AES76149.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
Length = 584
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 286/449 (63%), Positives = 340/449 (75%), Gaps = 49/449 (10%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L++YNS + E+F P V+GKV MYVCGVT+YD SHLGHARAA+SFD+L RYL+HLK E
Sbjct: 50 SLQLYNSKNNEMEVFEPEVKGKVSMYVCGVTSYDYSHLGHARAAISFDILVRYLKHLKYE 109
Query: 78 VTYVRNFTDVDDK------------IIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPP 125
VTYVRNFTD+ II+RAN+ G +PL LS +C EY VDM+DL C P
Sbjct: 110 VTYVRNFTDIIIIYLFIYFFEEAKLIIKRANEKGVDPLELSRHFCDEYNVDMSDLLCERP 169
Query: 126 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 185
T +PRVSDH++QIKDMIT+IINND AY V+GDVF++VEK PNYG LSGQR
Sbjct: 170 TKEPRVSDHIDQIKDMITKIINNDFAYEVDGDVFYSVEKFPNYGALSGQR---------- 219
Query: 186 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 245
KR+PADFALWKAAK GEPSWDSPWGPGRPGWHIECSAMSA YLS KFDIHGGGID
Sbjct: 220 -----KRHPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSACYLSHKFDIHGGGID 274
Query: 246 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 305
LIFPHHENEIAQ+ AA ++S + YW+HNGHVTNNNEKMSKSLGNFFT+R+ITERYHPLAL
Sbjct: 275 LIFPHHENEIAQNRAADKESRIKYWLHNGHVTNNNEKMSKSLGNFFTVREITERYHPLAL 334
Query: 306 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQ------TLQDCEVALSPF--QEHGKTAR 357
RHFLISAHYR+PLNYS+ QL+++SDA++YI+Q TL+DC ALS F ++ K +
Sbjct: 335 RHFLISAHYRAPLNYSIAQLETSSDAIYYIFQTSSSLKTLEDCRDALSSFLQEDSEKKDQ 394
Query: 358 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 417
IN AAE CINKL++EF M+DDL T IL GA +ALKF+N SL Q KQ
Sbjct: 395 IN-AAEKCINKLKEEFQTEMNDDLQTHVILKGALLEALKFMNRSL------QFKQ----- 442
Query: 418 IESLRKIENEVKEVLRILGLLPPGAYSEV 446
SL K+E EV+EVL++LGLL +Y+EV
Sbjct: 443 --SLLKVEQEVREVLKVLGLLSSLSYAEV 469
>gi|449517190|ref|XP_004165629.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 576
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 272/427 (63%), Positives = 333/427 (77%), Gaps = 6/427 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L ++N+M+++KE+F P V GKVGMYVCGVTAYDLSH+GHAR V+FD+LYRYL HL EV
Sbjct: 78 LWLHNTMSRKKEVFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYRYLRHLGYEV 137
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTDVDDKII RAN+LGE+PL+LS RYC+E+ DM L CLPP+ +P+VSDHM QI
Sbjct: 138 LYVRNFTDVDDKIIARANELGEDPLNLSRRYCEEFRRDMMYLHCLPPSVEPQVSDHMPQI 197
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
DMI QI++N AY V+GDV+F V+K P YG+LSG++LE+NRAGERV+VDSRK+NPADFA
Sbjct: 198 IDMIKQILDNGYAYCVDGDVYFNVDKFPEYGQLSGRKLEDNRAGERVSVDSRKKNPADFA 257
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEP W+SPWGPGRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQS
Sbjct: 258 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSASYLGYSFDIHGGGMDLVFPHHENEIAQS 317
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CA C+ SNVSYW+HNG VT ++EKMSKSLGNFFTIRQ+ + YHPLALR FL+ HYRSP+
Sbjct: 318 CATCRTSNVSYWVHNGFVTIDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLLGTHYRSPI 377
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
NYS L L+SASD +FYIYQTL DC +S E I P+ + INK + F MS
Sbjct: 378 NYSDLLLESASDRIFYIYQTLDDCRTVVSQEDESSFKGSIAPSLVEEINKFSNVFLTSMS 437
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD++T +L A D LK IN ++L ++ K+Q+ + ESL +E + VL ILGL+
Sbjct: 438 DDIHTPVVL-AALSDPLKIIN---DLLHTRKGKKQEFRM-ESLAALEKIIGNVLSILGLM 492
Query: 439 PPGAYSE 445
P +YSE
Sbjct: 493 -PASYSE 498
>gi|255548846|ref|XP_002515479.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
gi|223545423|gb|EEF46928.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
Length = 563
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 270/428 (63%), Positives = 331/428 (77%), Gaps = 12/428 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN+M++ K+LF P V GKVGMYVCGVTAYDLSH+GHAR V+FD+LYRYL+HL +V
Sbjct: 71 LYLYNTMSRNKDLFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYRYLKHLGYDV 130
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTDVDDKII RAN+LGE+P+SLS RYC+E+ DM L CLPP+ +P VSDHM QI
Sbjct: 131 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHNDMVYLHCLPPSIEPCVSDHMPQI 190
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+MI QI++N CAY ++GDV+F+++ P YG+LSG++LE+NRAGERVAVDSRK+NPADFA
Sbjct: 191 INMIKQILDNGCAYRIDGDVYFSIDGYPEYGKLSGRKLEDNRAGERVAVDSRKKNPADFA 250
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEP W+SPWGPGRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQS
Sbjct: 251 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 310
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAAC+ SN+SYW+HNG VT N+EKMSKSLGNFFTIRQ+ + YHPLALR FL+ HYRSP+
Sbjct: 311 CAACRGSNISYWVHNGFVTINSEKMSKSLGNFFTIRQVIDLYHPLALRFFLLGTHYRSPV 370
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
NYS +QL+SAS+ +FYIYQTL DCE +S + + + D INK D F MS
Sbjct: 371 NYSDVQLESASERIFYIYQTLHDCETVISQHETAFEKDSVPSDTLDGINKFSDVFVTSMS 430
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDL+T +L A D LK IN L+ K+ I+SL +E V++ L +LGL+
Sbjct: 431 DDLHTP-VLLAALSDPLKIINDMLHTRKR----------IQSLAALEKIVRDALSVLGLM 479
Query: 439 PPGAYSEV 446
P YSEV
Sbjct: 480 -PTTYSEV 486
>gi|261599941|dbj|BAI45221.1| cysteinyl tRNA synthetase [Beta vulgaris]
Length = 582
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 272/427 (63%), Positives = 336/427 (78%), Gaps = 6/427 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN+M+++KE+F P V GKVGMYVCGVTAYD SH+GHARA V+FD+LYRYL++L +V
Sbjct: 84 LWVYNTMSRKKEIFKPKVDGKVGMYVCGVTAYDFSHIGHARAYVTFDILYRYLKYLGYDV 143
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTDVDDKII RAN++GENP+SLS R+C E+ DM+ L CLPP+ +PRVSDHM QI
Sbjct: 144 CYVRNFTDVDDKIIARANEVGENPISLSRRFCDEFHQDMSYLHCLPPSVEPRVSDHMPQI 203
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
DMI QI++N AY V+GDV+F+VEK P+YGRLSG++LE+NRAGERVA+DSRKRNPADFA
Sbjct: 204 IDMIKQIVDNGFAYGVDGDVYFSVEKFPDYGRLSGRKLEDNRAGERVAIDSRKRNPADFA 263
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEP W+SPWGPGRPGWHIECSAMS+ YL FDIHGGG+DL+FPHHENEI QS
Sbjct: 264 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSSVYLGYSFDIHGGGMDLMFPHHENEIVQS 323
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAAC +SN+ YW+HNG VT N+EKMSKSLGNFFTIRQ+ E YHPLALR FL+ HYRSP+
Sbjct: 324 CAACCESNIRYWVHNGFVTINSEKMSKSLGNFFTIRQVIELYHPLALRLFLMGTHYRSPI 383
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
NYS + L+SAS+ +FYIYQTLQD + LS + I CIN L++ F MS
Sbjct: 384 NYSDVLLESASERIFYIYQTLQDSQALLSEYGRANLKDSIPQDIVSCINDLQNSFVISMS 443
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDL+T +L A D LK IN ++L ++ K+++L +ESL +E +K VL LGL+
Sbjct: 444 DDLHTPVVL-AALSDPLKTIN---DLLHTRKGKKRELR-VESLAALEKTIKHVLTALGLM 498
Query: 439 PPGAYSE 445
P +YSE
Sbjct: 499 -PSSYSE 504
>gi|296082122|emb|CBI21127.3| unnamed protein product [Vitis vinifera]
Length = 474
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 274/404 (67%), Positives = 326/404 (80%), Gaps = 7/404 (1%)
Query: 42 MYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGEN 101
MYVCGVTAYDLSH+GHAR VSFD+LYRYL HL+ EV YVRNFTDVDDKII RAN++GE+
Sbjct: 1 MYVCGVTAYDLSHIGHARVYVSFDVLYRYLRHLEYEVNYVRNFTDVDDKIIARANEMGED 60
Query: 102 PLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFA 161
P++LS RYCQE+ VDM L CLPP+ +P VSDHM QI DMI QII+NDCAY VEGDV+F+
Sbjct: 61 PINLSRRYCQEFHVDMTYLHCLPPSVEPCVSDHMPQIIDMIKQIIDNDCAYRVEGDVYFS 120
Query: 162 VEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGW 221
V+K P YGRLSG+++E+NRAGERVAVDSRK+NPADFALWKAAK GEP WDSPWGPGRPGW
Sbjct: 121 VDKFPEYGRLSGRKVEDNRAGERVAVDSRKKNPADFALWKAAKKGEPFWDSPWGPGRPGW 180
Query: 222 HIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNE 281
HIECSAMSA YL FDIHGGG+DL+FPHHENEIAQSCAAC+ SN+SYW+HNG VT ++E
Sbjct: 181 HIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACKQSNISYWIHNGFVTIDSE 240
Query: 282 KMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQD 341
KMSKSLGNFFTIRQ+ + YHPLALR FLI HYRSP+NYS +QL+SASD VFYIYQTL D
Sbjct: 241 KMSKSLGNFFTIRQVIDIYHPLALRLFLIGTHYRSPINYSDVQLESASDRVFYIYQTLHD 300
Query: 342 CEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSS 401
C+ A+ + K + P DCINK ++F MSDDL+T +L A D LK IN
Sbjct: 301 CQNAMDQ-DDMTKKDSVPPHILDCINKFYNDFLTSMSDDLHTPVVL-AALSDPLKTIN-- 356
Query: 402 LNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 445
++L ++ K+Q+L L ESL +E +++VL ILGL+ P +YSE
Sbjct: 357 -DLLHTRKGKKQELRL-ESLAALEKVIRDVLTILGLM-PASYSE 397
>gi|261599939|dbj|BAI45220.1| cysteinyl tRNA synthetase [Beta vulgaris]
Length = 582
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 272/427 (63%), Positives = 336/427 (78%), Gaps = 6/427 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN+M+++KE+F P V GKVGMYVCGVTAYD SH+GHARA V+FD+LYRYL++L +V
Sbjct: 84 LWVYNTMSRKKEIFKPKVDGKVGMYVCGVTAYDFSHIGHARAYVTFDILYRYLKYLGYDV 143
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTDVDDKII RAN++GENP+SLS R+C E+ DM+ L CLPP+ +PRVSDHM QI
Sbjct: 144 CYVRNFTDVDDKIIARANEVGENPISLSRRFCDEFHQDMSYLHCLPPSVEPRVSDHMPQI 203
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
DMI QI++N AY V+GDV+F+VEK P+YGRLSG++LE+NRAGERVA+DSRKRNPADFA
Sbjct: 204 IDMIKQIVDNGFAYGVDGDVYFSVEKFPDYGRLSGRKLEDNRAGERVAIDSRKRNPADFA 263
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEP W+SPWGPGRPGWHIECSAMS+ YL FDIHGGG+DL+FPHHENEI QS
Sbjct: 264 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSSVYLGYSFDIHGGGMDLMFPHHENEIVQS 323
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAAC +SN+ YW+HNG VT N+EKMSKSLGNFFTIRQ+ E YHPLALR FL+ HYRSP+
Sbjct: 324 CAACCESNIRYWVHNGFVTINSEKMSKSLGNFFTIRQVIELYHPLALRLFLMGTHYRSPI 383
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
NYS + L+SAS+ +FYIYQTLQD + LS + I CIN L++ F MS
Sbjct: 384 NYSDVLLESASERIFYIYQTLQDSQALLSEYGRANLKDSIPQDIVSCINDLQNSFVISMS 443
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDL+T +L A D LK IN ++L ++ K+++L +ESL +E +K VL LGL+
Sbjct: 444 DDLHTPVVL-AALSDPLKTIN---DLLHTRKGKKRELR-VESLAALEKTIKHVLTALGLM 498
Query: 439 PPGAYSE 445
P +YSE
Sbjct: 499 -PSSYSE 504
>gi|356509902|ref|XP_003523681.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 557
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 274/426 (64%), Positives = 333/426 (78%), Gaps = 8/426 (1%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
++N+M++ KELF P V KVGMYVCGVTAYDLSH+GHAR V+FDLLYRY +HL EV Y
Sbjct: 67 LHNTMSRTKELFKPKVESKVGMYVCGVTAYDLSHIGHARVYVNFDLLYRYFKHLGFEVCY 126
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRNFTDVDDKII RA +LGE+P+SLS RYC+E+ DM L CL P+ +P+VS+HM QI D
Sbjct: 127 VRNFTDVDDKIIARAKELGEDPISLSWRYCEEFCQDMVTLNCLSPSVEPKVSEHMPQIID 186
Query: 141 MITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALW 200
MI +I+NN AY+V+GDV+F VEK P YG+LS + LE+NRAGERVAVDSRK+NPADFALW
Sbjct: 187 MIEKILNNGYAYIVDGDVYFNVEKFPEYGKLSSRDLEDNRAGERVAVDSRKKNPADFALW 246
Query: 201 KAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCA 260
K+AK GEP W+SPWGPGRPGWHIECSAMSA YL FDIHGGGIDL+FPHHENEIAQSCA
Sbjct: 247 KSAKPGEPFWESPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGIDLVFPHHENEIAQSCA 306
Query: 261 ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNY 320
AC+ S++S WMHNG VT ++ KMSKSLGNFFTIRQ+ + YHPLALR+FL+SAHYRSP+NY
Sbjct: 307 ACKKSDISIWMHNGFVTIDSVKMSKSLGNFFTIRQVIDVYHPLALRYFLMSAHYRSPINY 366
Query: 321 SVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDD 380
S +QL+SASD VFYIY+TL +CE L+ Q + P D I+K D F MSDD
Sbjct: 367 SNIQLESASDRVFYIYETLHECESFLN--QHDQRKDSTPPDTLDIIDKFHDVFLTSMSDD 424
Query: 381 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 440
L+T +L G D LK IN ++L ++ K+QQ IESL +E V++VL +LGL+ P
Sbjct: 425 LHTPVVLAG-MSDPLKSIN---DLLHARKGKKQQFR-IESLSALEKSVRDVLTVLGLM-P 478
Query: 441 GAYSEV 446
+YSEV
Sbjct: 479 ASYSEV 484
>gi|297816954|ref|XP_002876360.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322198|gb|EFH52619.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 282/432 (65%), Positives = 331/432 (76%), Gaps = 33/432 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN+MTQ KE+F PI GK+GMYVCG+TAYD SH+GHARAAVSFDLLYRYL HL EV
Sbjct: 8 LTLYNTMTQLKEVFKPINPGKIGMYVCGITAYDYSHIGHARAAVSFDLLYRYLRHLGYEV 67
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTDVDDK A GE PL LSNR+C+EYL+DM LQCL PT QPRVSDHME I
Sbjct: 68 HYVRNFTDVDDK----AKKCGEKPLDLSNRFCEEYLLDMTALQCLIPTRQPRVSDHMEHI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI +II N C Y V GDVFF+V+KSP+YG+LSGQRL++ +AG+RVAVDSRKRNPADFA
Sbjct: 124 IKMIEKIIENGCGYAVGGDVFFSVDKSPSYGQLSGQRLDHTQAGKRVAVDSRKRNPADFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LW AAK+GEPSW+SPWGPGRPGWHIECSAMSAHYLS +FDIHGGG DL FPHHENEIAQ+
Sbjct: 184 LWNAAKSGEPSWESPWGPGRPGWHIECSAMSAHYLSPRFDIHGGGADLKFPHHENEIAQT 243
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAAC+DS V+YW+HNGHVTNNN KM KSL NFFTIR+IT +YHPLALRHFL+SA YRSPL
Sbjct: 244 CAACEDSGVNYWLHNGHVTNNNVKMGKSLDNFFTIREITAKYHPLALRHFLMSAQYRSPL 303
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH-----GKTARINPAAEDCINKLRDEF 373
NYSV QL+S+SDA++ YQTL+D LSP++E GKT + A E
Sbjct: 304 NYSVSQLESSSDALYCAYQTLEDLVKYLSPYREEMSGDVGKTQQTAEAKE---------- 353
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
+ ++ALKFIN S++ LKK Q K+Q++SLI SL ++E V+EVL
Sbjct: 354 -------------MIKKVKNALKFINVSISKLKKIQ-KKQRMSLIVSLVEVEKAVREVLD 399
Query: 434 ILGLLPPGAYSE 445
+LGLL +Y E
Sbjct: 400 VLGLLTTLSYDE 411
>gi|356515262|ref|XP_003526320.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 561
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 271/426 (63%), Positives = 332/426 (77%), Gaps = 6/426 (1%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
++N+M++ KELF P V KVGMYVCGVTAYDLSH+GHAR V+FDLLYRY +HL +V Y
Sbjct: 69 LHNTMSKTKELFKPKVDSKVGMYVCGVTAYDLSHIGHARVYVNFDLLYRYFKHLGFQVCY 128
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRNFTDVDDKII RA +LGE+P+SLS RYC+E+ DM L CL P+ +P+VS+HM QI D
Sbjct: 129 VRNFTDVDDKIIARAKELGEDPISLSRRYCEEFCQDMVTLNCLSPSVEPKVSEHMPQIID 188
Query: 141 MITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALW 200
MI +I+NN AY+V+GDV+F VEK P YG+LS + LE+NRAGERVAVDSRK+NPADFALW
Sbjct: 189 MIEKILNNGYAYIVDGDVYFNVEKFPEYGKLSSRDLEDNRAGERVAVDSRKKNPADFALW 248
Query: 201 KAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCA 260
K+AK GEP W+S WGPGRPGWHIECSAMSA YL FDIHGGGIDL+FPHHENEIAQSCA
Sbjct: 249 KSAKPGEPFWESRWGPGRPGWHIECSAMSAAYLGYSFDIHGGGIDLVFPHHENEIAQSCA 308
Query: 261 ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNY 320
AC+ S++S WMHNG VT ++ KMSKSLGNFFTIRQ+ + YHPLALR+FL+SAHYRSP+NY
Sbjct: 309 ACKKSDISVWMHNGFVTIDSVKMSKSLGNFFTIRQVIDIYHPLALRYFLMSAHYRSPINY 368
Query: 321 SVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDD 380
S +QL+SASD VFYIY+TL +CE L+ + + I P D I+K D F MSDD
Sbjct: 369 SNIQLESASDRVFYIYETLHECESFLNQHDQTIRKDSIPPDTLDIIDKFHDVFLTSMSDD 428
Query: 381 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 440
L+T +L G D LK IN ++L ++ K+QQ IESL +E V++VL +LGL+ P
Sbjct: 429 LHTPVVLAG-MSDPLKSIN---DLLHTRKGKKQQFR-IESLSALEKSVRDVLTVLGLM-P 482
Query: 441 GAYSEV 446
+Y EV
Sbjct: 483 ASYFEV 488
>gi|42569504|ref|NP_565717.2| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|330253408|gb|AEC08502.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 563
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 266/428 (62%), Positives = 330/428 (77%), Gaps = 6/428 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L ++N+M+++KELF P V GKVGMYVCGVTAYDLSH+GHAR V+FD+L RYL+HL EV
Sbjct: 65 LWLHNTMSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGYEV 124
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+YVRNFTDVDDKII RA +L E+P+SLS R+C+E+ DM LQCL P+ QPRVSDH+ QI
Sbjct: 125 SYVRNFTDVDDKIIARAKELEEDPISLSRRFCEEFNRDMEQLQCLDPSVQPRVSDHIPQI 184
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I QI++N AY V+GD++F+V+K P YG+LSG++LE+NRAGERVAVD+RK++PADFA
Sbjct: 185 IDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVDTRKKHPADFA 244
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQS
Sbjct: 245 LWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQS 304
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAAC SN+SYW+HNG VT ++EKMSKSLGNFFTIRQ+ + YHPLALR FL+ HYRSP+
Sbjct: 305 CAACDSSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLMGTHYRSPI 364
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
NYS L+SAS+ +FYIYQTL DCE AL + + IN R EF A MS
Sbjct: 365 NYSDFLLESASERIFYIYQTLHDCESALGEKDSTFENGSVPSDTLTSINTFRTEFVASMS 424
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDL T L A + LK IN ++ K K+ +++ ESL+ +E +++VL ILGL+
Sbjct: 425 DDLLTPVTL-AAMSEPLKTINDLIHTRKGKKQARRE----ESLKALETTIRDVLTILGLM 479
Query: 439 PPGAYSEV 446
P +YSEV
Sbjct: 480 -PTSYSEV 486
>gi|115480611|ref|NP_001063899.1| Os09g0556500 [Oryza sativa Japonica Group]
gi|113632132|dbj|BAF25813.1| Os09g0556500 [Oryza sativa Japonica Group]
gi|125606594|gb|EAZ45630.1| hypothetical protein OsJ_30298 [Oryza sativa Japonica Group]
Length = 569
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 270/432 (62%), Positives = 333/432 (77%), Gaps = 11/432 (2%)
Query: 19 LKIYNSMTQQKELFTPIV-RGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
L +YN+ +++KELF P V G+VGMYVCGVT YD SH+GHARA V+FD+LYRYL +L +
Sbjct: 72 LHLYNTKSRRKELFQPRVPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLYRYLRYLDHK 131
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
V YVRNFTD+DDKII RAN LGE+P SLS RY ++L DMA+L CLPP+ +PRVSDH++Q
Sbjct: 132 VRYVRNFTDIDDKIIARANQLGEDPFSLSKRYSDDFLSDMANLHCLPPSVEPRVSDHIDQ 191
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I +MI QII+NDCAY + GDV+F+VE P YG LSG++L++NRAGERVAVD RK+NPADF
Sbjct: 192 IINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKLDDNRAGERVAVDERKKNPADF 251
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSWDSPWGPGRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENEIAQ
Sbjct: 252 ALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLIFPHHENEIAQ 311
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AAC DS+++YW+HNG V N++KMSKSLGNF TIR++TE YHPLALR FL+ HYRSP
Sbjct: 312 SRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKVTELYHPLALRMFLLGTHYRSP 371
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHAR 376
+NY++ QL+ ASD ++Y YQTLQDCE + Q + G +N +CI KL DEF
Sbjct: 372 INYTIEQLNVASDRLYYTYQTLQDCEESCQQHQSKAGDPLPVN--TTNCIQKLHDEFETS 429
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQLSLIESLRKIENEVKEVLRIL 435
MSDDL+TS + A + LK +N L+ K KKQ K+ +ESL +E +++ VL +L
Sbjct: 430 MSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQEKR-----LESLSAMEEKIRMVLSVL 483
Query: 436 GLLPPGAYSEVK 447
GLLP Y ++
Sbjct: 484 GLLPSSYYEALQ 495
>gi|125564667|gb|EAZ10047.1| hypothetical protein OsI_32351 [Oryza sativa Indica Group]
Length = 569
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 270/432 (62%), Positives = 333/432 (77%), Gaps = 11/432 (2%)
Query: 19 LKIYNSMTQQKELFTPIV-RGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
L +YN+ +++KELF P V G+VGMYVCGVT YD SH+GHARA V+FD+LYRYL +L +
Sbjct: 72 LHLYNTKSRRKELFQPRVPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLYRYLRYLDHK 131
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
V YVRNFTD+DDKII RAN LGE+P SLS RY ++L DMA+L CLPP+ +PRVSDH++Q
Sbjct: 132 VRYVRNFTDIDDKIIARANQLGEDPFSLSKRYSDDFLSDMANLHCLPPSVEPRVSDHIDQ 191
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I +MI QII+NDCAY + GDV+F+VE P YG LSG++L++NRAGERVAVD RK+NPADF
Sbjct: 192 IINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKLDDNRAGERVAVDERKKNPADF 251
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSWDSPWGPGRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENEIAQ
Sbjct: 252 ALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLIFPHHENEIAQ 311
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AAC DS+++YW+HNG V N++KMSKSLGNF TIR++TE YHPLALR FL+ HYRSP
Sbjct: 312 SRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKVTELYHPLALRMFLLGTHYRSP 371
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHAR 376
+NY++ QL+ ASD ++Y YQTLQDCE + Q + G +N +CI KL DEF
Sbjct: 372 INYTIEQLNVASDRLYYTYQTLQDCEESCQQHQSKAGDPLPVN--TTNCIQKLHDEFETS 429
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQLSLIESLRKIENEVKEVLRIL 435
MSDDL+TS + A + LK +N L+ K KKQ K+ +ESL +E +++ VL +L
Sbjct: 430 MSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQEKR-----LESLSAMEEKIRMVLSVL 483
Query: 436 GLLPPGAYSEVK 447
GLLP Y ++
Sbjct: 484 GLLPSSYYEALQ 495
>gi|13877761|gb|AAK43958.1|AF370143_1 putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|15293251|gb|AAK93736.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|20197327|gb|AAM15026.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|20197896|gb|AAD20662.2| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 493
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 263/422 (62%), Positives = 325/422 (77%), Gaps = 6/422 (1%)
Query: 25 MTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNF 84
M+++KELF P V GKVGMYVCGVTAYDLSH+GHAR V+FD+L RYL+HL EV+YVRNF
Sbjct: 1 MSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGYEVSYVRNF 60
Query: 85 TDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQ 144
TDVDDKII RA +L E+P+SLS R+C+E+ DM LQCL P+ QPRVSDH+ QI D+I Q
Sbjct: 61 TDVDDKIIARAKELEEDPISLSRRFCEEFNRDMEQLQCLDPSVQPRVSDHIPQIIDLIKQ 120
Query: 145 IINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAK 204
I++N AY V+GD++F+V+K P YG+LSG++LE+NRAGERVAVD+RK++PADFALWKAAK
Sbjct: 121 ILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVDTRKKHPADFALWKAAK 180
Query: 205 AGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD 264
GEP W+SPWG GRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQSCAAC
Sbjct: 181 EGEPFWESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACDS 240
Query: 265 SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQ 324
SN+SYW+HNG VT ++EKMSKSLGNFFTIRQ+ + YHPLALR FL+ HYRSP+NYS
Sbjct: 241 SNISYWIHNGFVTVDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLMGTHYRSPINYSDFL 300
Query: 325 LDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTS 384
L+SAS+ +FYIYQTL DCE AL + + IN R EF A MSDDL T
Sbjct: 301 LESASERIFYIYQTLHDCESALGEKDSTFENGSVPSDTLTSINTFRTEFVASMSDDLLTP 360
Query: 385 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 444
+ A + LK IN ++ K K+ +++ ESL+ +E +++VL ILGL+P +YS
Sbjct: 361 -VTLAAMSEPLKTINDLIHTRKGKKQARRE----ESLKALETTIRDVLTILGLMPT-SYS 414
Query: 445 EV 446
EV
Sbjct: 415 EV 416
>gi|297826557|ref|XP_002881161.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327000|gb|EFH57420.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 562
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 263/428 (61%), Positives = 327/428 (76%), Gaps = 6/428 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L ++N+M+++KELF P + GKVGMYVCGVTAYDLSH+GHAR V+FD+L RYL+HL EV
Sbjct: 65 LWLHNTMSRKKELFKPKIEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGYEV 124
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+YVRNFTDVDDKII RAN+LGE+P+SLS R+C+E+ DM LQCL P+ QP VSDH+ QI
Sbjct: 125 SYVRNFTDVDDKIIARANELGEDPISLSRRFCEEFKRDMEQLQCLDPSVQPLVSDHIPQI 184
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I QI++N AY V+GD++F+V+K P YG+LSG++LE+NRAGERVAVD+RK++PADFA
Sbjct: 185 VDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVDTRKKHPADFA 244
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP W+SPWG GRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQS
Sbjct: 245 LWKTAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQS 304
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAAC SN+SYW+HNG VT ++EKMSKSLGNFFTIRQ+ + YHPLALR FL+ HYRSP+
Sbjct: 305 CAACDSSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLMGTHYRSPI 364
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
NYS L+SAS+ +FYIYQTL DCE L + IN EF A MS
Sbjct: 365 NYSDFLLESASERIFYIYQTLHDCESLLGEKDSTFGNDSVPSDTLTTINTFHSEFVASMS 424
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDL T L A + LK IN ++ K K+ +++ ESL+ +E +++VL ILGL+
Sbjct: 425 DDLLTPVTL-AAMSEPLKTINDIIHTRKGKKQARRE----ESLKALETTIRDVLTILGLM 479
Query: 439 PPGAYSEV 446
P +YSEV
Sbjct: 480 PT-SYSEV 486
>gi|414873768|tpg|DAA52325.1| TPA: chloroplast protein synthesis1 [Zea mays]
Length = 564
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/434 (61%), Positives = 330/434 (76%), Gaps = 15/434 (3%)
Query: 11 AAPKMDLTLKIYNSMTQQKELFTPIVRGK-VGMYVCGVTAYDLSHLGHARAAVSFDLLYR 69
AA L++YN+ +++KE F P + G+ VGMYVCGVT YD SH+GHARA V+FD+LYR
Sbjct: 58 AATDRTRELRLYNTKSRKKEQFRPRIPGREVGMYVCGVTPYDDSHIGHARAYVAFDVLYR 117
Query: 70 YLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQP 129
YL +L EV YVRNFTD+DDKII RAN LGE+P SLS R+ ++L DMA+LQCLPP+ +P
Sbjct: 118 YLRYLDYEVRYVRNFTDIDDKIIARANQLGEDPFSLSKRFSDDFLSDMANLQCLPPSVEP 177
Query: 130 RVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS 189
RVSDH+++I +MI QI++N CAYVV GDV+F+V+ P YG LSG++L++NRAGERVAVD
Sbjct: 178 RVSDHVDEIINMIKQILDNRCAYVVGGDVYFSVDNFPEYGELSGRKLDDNRAGERVAVDE 237
Query: 190 RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFP 249
RKRNPADFALWKAAK GEP WDSPWGPGRPGWHIECSAMSAHYL FDIHGGG DLIFP
Sbjct: 238 RKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLIFP 297
Query: 250 HHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFL 309
HHENEIAQS AAC DS ++YW+HNG V N++KMSKSLGNF TIR++ E YHPLALR FL
Sbjct: 298 HHENEIAQSRAACCDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKVIEMYHPLALRMFL 357
Query: 310 ISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN-- 367
+ HYRSP+NY++ QL+ ASD ++Y YQTL+DCE +H ++ NP + +N
Sbjct: 358 LGTHYRSPINYTIEQLNVASDRLYYTYQTLRDCE----EICQHQQSNTGNPLPANTLNYI 413
Query: 368 -KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQLSLIESLRKIE 425
KL DEF MSDDL+TS + A + LK +N L+ K KKQ K+ +ESL +E
Sbjct: 414 QKLHDEFETSMSDDLHTS-VALAAMSEPLKVMNDLLHTRKGKKQDKR-----LESLSALE 467
Query: 426 NEVKEVLRILGLLP 439
+++ VL +LGLLP
Sbjct: 468 EKIRVVLSVLGLLP 481
>gi|148909295|gb|ABR17747.1| unknown [Picea sitchensis]
Length = 602
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 268/432 (62%), Positives = 335/432 (77%), Gaps = 13/432 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L I+N+M+++KELF GKVGMYVCGVTAYD SH+GHAR V+FD+LYRYL+ L EV
Sbjct: 105 LYIFNTMSKKKELFKAREPGKVGMYVCGVTAYDYSHIGHARVYVTFDILYRYLQRLGYEV 164
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTD+DDKII RANDLGENPLSLSNR+C+E+ VDMA+L CLPP+ +PRV+DH+ QI
Sbjct: 165 KYVRNFTDIDDKIISRANDLGENPLSLSNRFCKEFQVDMAELNCLPPSVEPRVTDHINQI 224
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+MI QI+ N AYVVE GDV+F+V+K P YG LSG++L++NRAGER+AVDSRK+NPADF
Sbjct: 225 IEMIQQILRNGYAYVVENGDVYFSVDKYPKYGCLSGRKLDDNRAGERIAVDSRKQNPADF 284
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK EP WDSPWGPGRPGWHIECSAMSA +L FDIHGGG+DLIFPHHENEIAQ
Sbjct: 285 ALWKSAKPSEPFWDSPWGPGRPGWHIECSAMSAAHLGYCFDIHGGGVDLIFPHHENEIAQ 344
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SCA+C DSNV YW+HNG VT + EKMSKSLGNFFTIR++ E YHPLALR FL HYRS
Sbjct: 345 SCASCNDSNVPYWIHNGFVTVDAEKMSKSLGNFFTIREVLESYHPLALRLFLSGTHYRSQ 404
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC---INKLRDEFH 374
LNYS QL++AS+ +FYIYQTL+DCE LS H + + P ED IN + + F
Sbjct: 405 LNYSKSQLENASERLFYIYQTLKDCEECLS---GHVRQSIGQPIPEDIQKRINNIHNAFS 461
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
+ MS+DL+ + L A + LK +N +++ +Q ++Q+L + E L +E + +++L
Sbjct: 462 SSMSNDLHIAMALD-ALSEPLKIMN---DLMFTRQGRKQKLRM-EFLDSLEVKTRDLLSD 516
Query: 435 LGLLPPGAYSEV 446
LGL+ P +YSEV
Sbjct: 517 LGLMSP-SYSEV 527
>gi|168067577|ref|XP_001785689.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662678|gb|EDQ49502.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 491
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 258/425 (60%), Positives = 327/425 (76%), Gaps = 11/425 (2%)
Query: 25 MTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNF 84
M +QKE+F PIV GKV MYVCGVT YD SH+GHAR V+FD+L+RYL+ + +VTYVRNF
Sbjct: 1 MKKQKEVFQPIVPGKVSMYVCGVTTYDYSHIGHARVYVAFDVLFRYLKSVGYDVTYVRNF 60
Query: 85 TDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQ 144
TD+DDKII+RAN++GE+PL+LS R+C E+ VDM L+CLPP +PRVSDH+ QI MI+Q
Sbjct: 61 TDIDDKIIKRANEVGEDPLNLSRRFCDEFQVDMELLRCLPPNVEPRVSDHIPQIIKMISQ 120
Query: 145 IINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAA 203
II N YV+EG DV+F V+ P YG LSG++ E NRAGERV VD+RKRNPADFALWK+A
Sbjct: 121 IIENKNGYVMEGGDVYFEVDTLPTYGCLSGRKQEENRAGERVLVDNRKRNPADFALWKSA 180
Query: 204 KAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQ 263
K GEP+WDSPWGPGRPGWHIECSAMSA +L KFDIHGGG+DLIFPHHENEIAQSCAAC
Sbjct: 181 KPGEPAWDSPWGPGRPGWHIECSAMSAEHLGHKFDIHGGGMDLIFPHHENEIAQSCAACA 240
Query: 264 DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVL 323
DS V YW+HNG VT +NEKMSKS+GNFFTIR++ E YHPLALR FL+ HYR+P+NYS
Sbjct: 241 DSRVGYWLHNGFVTVDNEKMSKSVGNFFTIREVLELYHPLALRWFLLGTHYRAPVNYSKR 300
Query: 324 QLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDEFHARMSDDL 381
QL+ ASD VFYI+QTL DCE LS Q+ K A NP+ E + + +++ F M+DDL
Sbjct: 301 QLEVASDRVFYIFQTLVDCEQILS--QQVDKVAACNPSKEAIELVKSIKNTFRTSMADDL 358
Query: 382 NTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPG 441
NT ++ +F ++ KF+N ++ K ++ K + + SL+ + E++EV+ +LG P
Sbjct: 359 NTP-VVVASFSESFKFMNDLMHTRKGRKDKTR----LVSLQLLITEIQEVMNVLGFQIP- 412
Query: 442 AYSEV 446
+YS+V
Sbjct: 413 SYSKV 417
>gi|357159997|ref|XP_003578624.1| PREDICTED: cysteinyl-tRNA synthetase-like [Brachypodium distachyon]
Length = 567
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 262/439 (59%), Positives = 332/439 (75%), Gaps = 9/439 (2%)
Query: 11 AAPKMDLTLKIYNSMTQQKELFTPIV-RGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYR 69
AA + L +YN+ ++++ELF P G+VGMYVCGVT YD SH+GHARA V+FD+L+R
Sbjct: 61 AAAERARDLHLYNTKSRRRELFRPRAPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLFR 120
Query: 70 YLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQP 129
YL +L EV YVRNFTD+DDKII RAN LGE+P SLS RY +L DMA LQCLPP+ +P
Sbjct: 121 YLRYLDYEVRYVRNFTDIDDKIIARANQLGEDPFSLSKRYSDAFLSDMAHLQCLPPSVEP 180
Query: 130 RVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS 189
RVSDH++QI +MI QI++N CAYVV GDV+F+V+ P YG LSG++L++NRAGER+AVD
Sbjct: 181 RVSDHIDQIVNMIKQILDNGCAYVVSGDVYFSVDNFPEYGMLSGRKLDDNRAGERIAVDE 240
Query: 190 RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFP 249
RK+NPADFALWKAAK GEP WDSPWGPGRPGWHIECSAMSA YL + FDIHGGG DLIFP
Sbjct: 241 RKKNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAQYLGNSFDIHGGGEDLIFP 300
Query: 250 HHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFL 309
HHENEIAQS AAC DS+++YW+HNG V N++KMSKSLGNF TIR++ E+YHPLALR FL
Sbjct: 301 HHENEIAQSRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKVIEQYHPLALRMFL 360
Query: 310 ISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL 369
+ HYRSP+NY+V QL+ ASD ++Y YQTL+D E + Q + + A + CI KL
Sbjct: 361 LGTHYRSPINYTVEQLNVASDRLYYTYQTLRDSEESTQKDQINSEDA-LPATTTHCIEKL 419
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQLSLIESLRKIENEV 428
++EF MSDDL+TS + A + LK +N L+ K KKQ K+ +ESL +E ++
Sbjct: 420 QNEFETSMSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQEKR-----LESLFALEEKI 473
Query: 429 KEVLRILGLLPPGAYSEVK 447
+ VL +LGL+P Y ++
Sbjct: 474 RTVLSVLGLMPSSYYEALQ 492
>gi|242050146|ref|XP_002462817.1| hypothetical protein SORBIDRAFT_02g032450 [Sorghum bicolor]
gi|241926194|gb|EER99338.1| hypothetical protein SORBIDRAFT_02g032450 [Sorghum bicolor]
Length = 571
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 266/436 (61%), Positives = 328/436 (75%), Gaps = 15/436 (3%)
Query: 8 GTVAAPKMDLTLKIYNSMTQQKELFTPI-VRGKVGMYVCGVTAYDLSHLGHARAAVSFDL 66
GT A +L L YN+ +++KE F P G+VGMYVCGVT YD SH+GHARA V+FD+
Sbjct: 65 GTAAERTRELHL--YNTKSRKKEQFRPRDPGGEVGMYVCGVTPYDDSHIGHARAYVAFDV 122
Query: 67 LYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPT 126
LYRYL +L EV YVRNFTD+DDKII RAN LGE+P SLS R+ ++L DMA+LQCLPP+
Sbjct: 123 LYRYLRYLDYEVRYVRNFTDIDDKIIARANQLGEDPFSLSKRFSDDFLSDMANLQCLPPS 182
Query: 127 YQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVA 186
+PRVSDH+ +I +MI QI++N CAYVV GDV+F+VE P YG LSG++L++NRAGERVA
Sbjct: 183 VEPRVSDHIHEIINMIKQILDNSCAYVVGGDVYFSVENFPEYGELSGRKLDDNRAGERVA 242
Query: 187 VDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDL 246
VD RKRNPADFALWKAAK GEP WDSPWGPGRPGWHIECSAMSAHYL FDIHGGG DL
Sbjct: 243 VDERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDL 302
Query: 247 IFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 306
IFPHHENEIAQS AAC DS ++YW+HNG V N++KMSKSLGNF TIR++ E YHPLALR
Sbjct: 303 IFPHHENEIAQSRAACCDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKVIEMYHPLALR 362
Query: 307 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA--RINPAAED 364
FL+ HYRSP+NY++ QL+ ASD ++Y YQTL+DCE + Q+ G + P +
Sbjct: 363 MFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLRDCEESC---QQQGSNTGNSLPPNTLN 419
Query: 365 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQLSLIESLRK 423
I KL DEF MSDDL+TS + A + LK +N L+ K KKQ K+ +E+L
Sbjct: 420 YIQKLHDEFETSMSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQDKR-----LEALSA 473
Query: 424 IENEVKEVLRILGLLP 439
++ +++ VL +LGLLP
Sbjct: 474 LDEKIRVVLSVLGLLP 489
>gi|357466121|ref|XP_003603345.1| Cysteinyl tRNA synthetase [Medicago truncatula]
gi|355492393|gb|AES73596.1| Cysteinyl tRNA synthetase [Medicago truncatula]
Length = 608
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 267/461 (57%), Positives = 325/461 (70%), Gaps = 43/461 (9%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
++N+M+++KELF P V KVGMYVCGVTAYDLSH+GHAR V+FDLLYRY +HL +V Y
Sbjct: 78 LHNTMSKKKELFKPKVEKKVGMYVCGVTAYDLSHIGHARVYVNFDLLYRYFKHLGFQVCY 137
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRNFTDVDDKII R+ +LGE+P+SLS RYC+E+ DM L CLP T +P+VS+HM QI +
Sbjct: 138 VRNFTDVDDKIIARSKELGEDPISLSRRYCEEFCQDMVTLNCLPATVEPKVSEHMPQIIE 197
Query: 141 MITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALW 200
MI +I+NN AY V+GD++F VEK P YG+LS + LE+NRAGERVAVDSRK+NPADFALW
Sbjct: 198 MIEKILNNGYAYDVDGDIYFNVEKFPEYGKLSSRGLEDNRAGERVAVDSRKKNPADFALW 257
Query: 201 KAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCA 260
K+ K GEP W+SPWGPGRPGWHIECSAMSA YL FDIHGGGIDL+FPHHENEIAQSCA
Sbjct: 258 KSTKPGEPFWESPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGIDLVFPHHENEIAQSCA 317
Query: 261 ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNY 320
AC S++S WMHNG VT ++ KMSKSLGNFFTIRQ+ + YHPLALR+FL+SAHYRSP+NY
Sbjct: 318 ACSKSDISVWMHNGFVTIDSVKMSKSLGNFFTIRQVVDVYHPLALRYFLMSAHYRSPMNY 377
Query: 321 SVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR---INPAAEDCINKLRDEFHARM 377
S + L+SASD VFYIY+TL +CE L ++H +T R + P I D F M
Sbjct: 378 SNIHLESASDRVFYIYETLHECESFL---KQHDQTVRKDSVPPDTLSIIGNFYDVFRTSM 434
Query: 378 SDDLNTSHILTGAFQDALKFINSSL-------------------------------NM-- 404
SDDL+T L G D LK IN L NM
Sbjct: 435 SDDLHTPVALAG-MSDPLKLINDLLHTRKWISGRARHHSIKNTIIREKIVVHVILQNMKD 493
Query: 405 --LKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 443
L+ K+QQ IESL ++ + +VL +LGL+P Y
Sbjct: 494 SRLRWFGGKKQQFR-IESLAALKKSIGDVLTVLGLMPSSYY 533
>gi|326523811|dbj|BAJ93076.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 573
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/432 (60%), Positives = 325/432 (75%), Gaps = 11/432 (2%)
Query: 11 AAPKMDLTLKIYNSMTQQKELFTPIV-RGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYR 69
AAP+ + +YN+ ++++E F P G+VGMYVCGVT YD SH+GHARA V+FD+L+R
Sbjct: 66 AAPEKARDMHLYNTRSRRREPFRPRAPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLFR 125
Query: 70 YLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQP 129
YL +L EV YVRNFTD+DDKII RAN LGE+P SLS RY ++L DMA LQCLPP+ +P
Sbjct: 126 YLRYLDYEVRYVRNFTDIDDKIIARANQLGEDPFSLSKRYSDDFLSDMAHLQCLPPSVEP 185
Query: 130 RVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS 189
RVSDH++QI MI QII+N CAYVV GDV+F+V+ P Y +LSG++L++NRAGERVAVD
Sbjct: 186 RVSDHIDQIVTMIKQIIDNGCAYVVSGDVYFSVDNFPEYRKLSGRKLDDNRAGERVAVDE 245
Query: 190 RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFP 249
RK+NPADFALWKAAK GEP WDSPWGPGRPGWHIECSAMSA YL + FDIHGGG DLIFP
Sbjct: 246 RKKNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAQYLGNSFDIHGGGEDLIFP 305
Query: 250 HHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFL 309
HHENEIAQS AAC DS+++YW+HNG V N +KMSKSLGNF TIR++ E YHPLALR FL
Sbjct: 306 HHENEIAQSRAACCDSSINYWVHNGFVNVNGQKMSKSLGNFITIRKVIELYHPLALRMFL 365
Query: 310 ISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP-AAEDCINK 368
+ HYRSP+NY+V QL+ ASD ++Y YQTL+D E + Q+ + P CI K
Sbjct: 366 LGTHYRSPINYTVEQLNVASDRLYYTYQTLRDSEESTQ--QDQSSSGDSLPFTTTHCIEK 423
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQLSLIESLRKIENE 427
L ++F MSDDL+TS + A + LK +N L+ K KKQ K+ +ESL +E +
Sbjct: 424 LHEDFETSMSDDLHTS-VALAAVSEPLKVMNDLLHTRKGKKQEKR-----LESLAALEEK 477
Query: 428 VKEVLRILGLLP 439
V+ VL +LGL+P
Sbjct: 478 VRMVLSVLGLMP 489
>gi|212723404|ref|NP_001131561.1| uncharacterized protein LOC100192902 [Zea mays]
gi|194691858|gb|ACF80013.1| unknown [Zea mays]
gi|414590163|tpg|DAA40734.1| TPA: hypothetical protein ZEAMMB73_139992 [Zea mays]
Length = 573
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 258/424 (60%), Positives = 324/424 (76%), Gaps = 11/424 (2%)
Query: 19 LKIYNSMTQQKELFTPI-VRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
L +YN+ +++KE F P G+VGMYVCG+T YD SH+GHARA V+FD++YRYL +L E
Sbjct: 76 LHLYNTKSRKKEQFRPRDPGGEVGMYVCGITPYDDSHIGHARAYVAFDVVYRYLRYLDYE 135
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
V YVRNFTD+DDKII RAN LGE+P +LS R+ ++L+DMA+LQCLPP+ +PRVSDH+++
Sbjct: 136 VRYVRNFTDIDDKIIARANQLGEDPFNLSKRFSDDFLLDMANLQCLPPSVEPRVSDHIDE 195
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I +MI QI++N CAYVV GDV+F+V+ P+YG LSG++L++NRAGERV+VD RKRNPADF
Sbjct: 196 IINMIKQILDNSCAYVVGGDVYFSVDSFPDYGELSGRKLDDNRAGERVSVDERKRNPADF 255
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEP WDSPWGPGRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENEIAQ
Sbjct: 256 ALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLIFPHHENEIAQ 315
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AAC DS ++YW+HNG V N++KMSKSLGNF TIR++ E YHPLALR FL+ HYRSP
Sbjct: 316 SRAACCDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKVIEMYHPLALRMFLLGTHYRSP 375
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEFHAR 376
+NY++ QL+ SD ++Y YQTL DCE Q+ T PA + I KL +EF
Sbjct: 376 INYTIEQLNVTSDRLYYTYQTLLDCEEICQ--QQQSNTGNSLPANTLNYIQKLHEEFETS 433
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQLSLIESLRKIENEVKEVLRIL 435
MSDDL+TS + A + LK +N L+ K KKQ K+ +ESL +E +++ VL +L
Sbjct: 434 MSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQDKR-----LESLSALEEKIRVVLSVL 487
Query: 436 GLLP 439
GLLP
Sbjct: 488 GLLP 491
>gi|15228880|ref|NP_191189.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|7572928|emb|CAB87429.1| cysteine-tRNA ligase [Arabidopsis thaliana]
gi|332645985|gb|AEE79506.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 489
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 269/438 (61%), Positives = 325/438 (74%), Gaps = 58/438 (13%)
Query: 14 KMDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEH 73
K DLTL YN+MTQ KE++ P+ GK+G+YVCG+TAYD SH+GHARAAVSFDLLYRYL H
Sbjct: 8 KPDLTL--YNTMTQLKEVYKPMNPGKIGIYVCGITAYDYSHIGHARAAVSFDLLYRYLRH 65
Query: 74 LKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSD 133
L +VTYVRNFTDVDDK A + GE PL LSNR+C+EYL+DMA LQCL PT+QPRVSD
Sbjct: 66 LGYQVTYVRNFTDVDDK----AKNCGEKPLDLSNRFCEEYLLDMAALQCLLPTHQPRVSD 121
Query: 134 HMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRN 193
HMEQI MI +II N C Y V GDVFF+V+KSP+YG+LSGQRL++ +AG+RVAVDSRKRN
Sbjct: 122 HMEQIIKMIEKIIENGCGYAVGGDVFFSVDKSPSYGQLSGQRLDHTQAGKRVAVDSRKRN 181
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
PADFAL KAAK+GEPSW+SPWG GRPGWHIE FDIHGGG DL FPHHEN
Sbjct: 182 PADFALRKAAKSGEPSWESPWGHGRPGWHIE------------FDIHGGGADLKFPHHEN 229
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQ+CAAC+DS V+YW+HNGHVTNNN KM KSL NFFTIRQI YHPLALRHFL+SA
Sbjct: 230 EIAQTCAACEDSGVNYWLHNGHVTNNNVKMGKSLNNFFTIRQIAANYHPLALRHFLMSAQ 289
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH-----GKTARINPAAEDCINK 368
YRSPLNYSV QL+S+SDA++ +LSP++E GKT + + A++ I K
Sbjct: 290 YRSPLNYSVSQLESSSDALY-----------SLSPYREEMSGDVGKTQQ-SAEAKEMIKK 337
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
++ +ALKFIN S++ LKK Q K+Q++SL+ SL ++E V
Sbjct: 338 VK----------------------NALKFINVSISKLKKMQ-KKQRMSLVVSLVEVEKAV 374
Query: 429 KEVLRILGLLPPGAYSEV 446
+EVL +LGLL +Y E+
Sbjct: 375 REVLDVLGLLTTLSYGEL 392
>gi|108706130|gb|ABF93925.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|108706131|gb|ABF93926.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|218192068|gb|EEC74495.1| hypothetical protein OsI_09969 [Oryza sativa Indica Group]
gi|222624173|gb|EEE58305.1| hypothetical protein OsJ_09367 [Oryza sativa Japonica Group]
Length = 528
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 256/449 (57%), Positives = 321/449 (71%), Gaps = 23/449 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+++NSMT++KELF P+V GKV MYVCGVT YD SH+GHARA V+FD+LYRYL+ L EV
Sbjct: 11 LELFNSMTKKKELFEPLVEGKVRMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGYEV 70
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTD+DDKII+RAN+ GE SLS+R+ E+L+DMA LQCLPPT +PRV+DH+E I
Sbjct: 71 EYVRNFTDIDDKIIKRANEAGETVTSLSSRFINEFLLDMAQLQCLPPTCEPRVTDHIEHI 130
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++IT+I+ N AY +EGDV+F+V+ P Y LSG++L++N AG RVAVD+RKRNPADFA
Sbjct: 131 IELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKLDHNLAGSRVAVDTRKRNPADFA 190
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP WDSPWG GRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENE+AQS
Sbjct: 191 LWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHENELAQS 250
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +S V WMHNG V +++KMSKS NFFTIR I + YHP+ALR FL+ HYR +
Sbjct: 251 RAAYPESEVKCWMHNGFVNKDDQKMSKSDKNFFTIRDIIDLYHPMALRFFLMRTHYRGDV 310
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+ ASD V+YIYQTL DCE LS ++ + + +D +NK EF M+
Sbjct: 311 NHSDKALEIASDRVYYIYQTLYDCEEVLSQYRGENISVPVPVEEQDMVNKHHSEFLESMA 370
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL----------------------S 416
DDL T+ +L G F D LK INS+LN KK Q K +Q
Sbjct: 371 DDLRTTDVLDG-FTDLLKAINSNLNDFKKLQQKLEQQKKKQQQQKQQKQKQQQAQKQPEE 429
Query: 417 LIESLRKIENEVKEVLRILGLLPPGAYSE 445
I+++ +E E+K + ILGL+PP + +E
Sbjct: 430 YIQAMFALETEIKNKISILGLMPPSSLAE 458
>gi|226531133|ref|NP_001146887.1| LOC100280495 [Zea mays]
gi|195604736|gb|ACG24198.1| cysteinyl-tRNA synthetase [Zea mays]
gi|413945620|gb|AFW78269.1| cysteinyl-tRNA synthetase [Zea mays]
Length = 556
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 259/465 (55%), Positives = 326/465 (70%), Gaps = 22/465 (4%)
Query: 4 SKETGTVAAPKMDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVS 63
S + TVA L ++NS+T+++E F P V GKVGMYVCGVT YD SH+GHARA V+
Sbjct: 18 SSPSATVAQATALPQLVLFNSLTKREEPFQPRVEGKVGMYVCGVTPYDFSHIGHARAYVA 77
Query: 64 FDLLYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCL 123
FD+LYRYL+ L EV YVRNFTD+DDKII+RAN+ GE SLS+R+ E+L+DM +LQCL
Sbjct: 78 FDVLYRYLKFLGYEVEYVRNFTDIDDKIIKRANERGETVTSLSSRFINEFLLDMTELQCL 137
Query: 124 PPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 183
PPT +PRV++H+E I ++IT+I+ ND AY +EGDV+F+VE P Y LSG++ + N+AG
Sbjct: 138 PPTCEPRVTEHIEHIIELITKIMENDKAYAMEGDVYFSVESFPEYLSLSGRKFDQNQAGA 197
Query: 184 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 243
RVA D+RKRNPADFALWKAAK GEP WDSPWG GRPGWHIECSAMSAHYL FDIHGGG
Sbjct: 198 RVAFDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHLFDIHGGG 257
Query: 244 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
DLIFPHHENE+AQS AA +S V WMHNG V +++KM+KS NFFTIR IT YHPL
Sbjct: 258 KDLIFPHHENELAQSRAAYPESEVKCWMHNGFVNKDDKKMAKSDNNFFTIRDITALYHPL 317
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
ALR FL+ HYRS +N+S L+ ASD V+YI+QTL DCE L+ ++E G + + +
Sbjct: 318 ALRFFLMRTHYRSDVNHSDQALEIASDRVYYIFQTLYDCEEVLATYREEGISLSVPFEEQ 377
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL------ 417
+ I+K EF MS+DL T+ +L F + LK INSSLN LKK Q K +Q
Sbjct: 378 NLIDKHHSEFLKYMSNDLKTTDVLDRCFMELLKAINSSLNDLKKLQQKIEQQKKKQQQQK 437
Query: 418 ----------------IESLRKIENEVKEVLRILGLLPPGAYSEV 446
I++L +E E+K L ILGL+P + +EV
Sbjct: 438 KQQQKQQQLQKQPEHYIQALIALEIELKNKLSILGLMPSSSLAEV 482
>gi|224031283|gb|ACN34717.1| unknown [Zea mays]
gi|413949577|gb|AFW82226.1| hypothetical protein ZEAMMB73_235131 [Zea mays]
gi|413949578|gb|AFW82227.1| hypothetical protein ZEAMMB73_235131 [Zea mays]
Length = 561
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 257/471 (54%), Positives = 321/471 (68%), Gaps = 28/471 (5%)
Query: 4 SKETGTVAAPKMDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVS 63
S + T+A L ++NS T+++E F P V GKVGMYVCGVT YD SH+GHARA V+
Sbjct: 19 SPPSATIAEATAPPQLLLFNSFTKREEPFQPRVEGKVGMYVCGVTPYDFSHIGHARAYVA 78
Query: 64 FDLLYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCL 123
FD+LYRYL+ L EV YVRNFTD+DDKII+RAN+ GE SLS+++ E+L+DM +LQCL
Sbjct: 79 FDVLYRYLKFLGYEVEYVRNFTDIDDKIIKRANERGETVTSLSSQFINEFLLDMTELQCL 138
Query: 124 PPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 183
PPT +PRV++H+E I +ITQI+ N AY +EGDV+F+VE P Y LSG++ + N+AG
Sbjct: 139 PPTCEPRVTEHIEHIIKLITQIMENGKAYAIEGDVYFSVESFPEYLSLSGRKFDQNQAGA 198
Query: 184 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 243
RVA D+RKRNPADFALWKAAK GEP WDSPWG GRPGWHIECSAMSAHYL FDIHGGG
Sbjct: 199 RVAFDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGG 258
Query: 244 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
DLIFPHHENE+AQS AA DS V WMHNG V +++KM+KS NFFTIR I YHP+
Sbjct: 259 KDLIFPHHENELAQSRAAYPDSEVKCWMHNGFVNKDDKKMAKSDNNFFTIRDIIALYHPM 318
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
ALR FL+ HYRS +N+S L+ ASD V+YIYQTL DCE L+ ++E G + + +
Sbjct: 319 ALRFFLMRTHYRSDVNHSDQALEIASDRVYYIYQTLYDCEEVLATYREEGTSLPVPSEEQ 378
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL-------- 415
+ I K EF MS+DL T+ +L F + LK INSSLN LKK Q K +Q
Sbjct: 379 NLIGKHHSEFLKHMSNDLKTTDVLDRCFMELLKAINSSLNDLKKLQQKIEQQKKKQQQQK 438
Query: 416 --------------------SLIESLRKIENEVKEVLRILGLLPPGAYSEV 446
I++L +E E+K L ILGL+P + +EV
Sbjct: 439 KQQQQKQQQQKQQQLQKQPEDYIQALIALETELKNKLSILGLMPSSSLAEV 489
>gi|413945619|gb|AFW78268.1| hypothetical protein ZEAMMB73_967684 [Zea mays]
Length = 568
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 260/477 (54%), Positives = 327/477 (68%), Gaps = 34/477 (7%)
Query: 4 SKETGTVAAPKMDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVS 63
S + TVA L ++NS+T+++E F P V GKVGMYVCGVT YD SH+GHARA V+
Sbjct: 18 SSPSATVAQATALPQLVLFNSLTKREEPFQPRVEGKVGMYVCGVTPYDFSHIGHARAYVA 77
Query: 64 FDLLYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCL 123
FD+LYRYL+ L EV YVRNFTD+DDKII+RAN+ GE SLS+R+ E+L+DM +LQCL
Sbjct: 78 FDVLYRYLKFLGYEVEYVRNFTDIDDKIIKRANERGETVTSLSSRFINEFLLDMTELQCL 137
Query: 124 PPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 183
PPT +PRV++H+E I ++IT+I+ ND AY +EGDV+F+VE P Y LSG++ + N+AG
Sbjct: 138 PPTCEPRVTEHIEHIIELITKIMENDKAYAMEGDVYFSVESFPEYLSLSGRKFDQNQAGA 197
Query: 184 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 243
RVA D+RKRNPADFALWKAAK GEP WDSPWG GRPGWHIECSAMSAHYL FDIHGGG
Sbjct: 198 RVAFDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHLFDIHGGG 257
Query: 244 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR--------- 294
DLIFPHHENE+AQS AA +S V WMHNG V +++KM+KS NFFTIR
Sbjct: 258 KDLIFPHHENELAQSRAAYPESEVKCWMHNGFVNKDDKKMAKSDNNFFTIRDLSLEVITV 317
Query: 295 ---QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE 351
QIT YHPLALR FL+ HYRS +N+S L+ ASD V+YI+QTL DCE L+ ++E
Sbjct: 318 VFVQITALYHPLALRFFLMRTHYRSDVNHSDQALEIASDRVYYIFQTLYDCEEVLATYRE 377
Query: 352 HGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 411
G + + ++ I+K EF MS+DL T+ +L F + LK INSSLN LKK Q K
Sbjct: 378 EGISLSVPFEEQNLIDKHHSEFLKYMSNDLKTTDVLDRCFMELLKAINSSLNDLKKLQQK 437
Query: 412 QQQLSL----------------------IESLRKIENEVKEVLRILGLLPPGAYSEV 446
+Q I++L +E E+K L ILGL+P + +EV
Sbjct: 438 IEQQKKKQQQQKKQQQKQQQLQKQPEHYIQALIALEIELKNKLSILGLMPSSSLAEV 494
>gi|326503818|dbj|BAK02695.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 563
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/450 (56%), Positives = 319/450 (70%), Gaps = 23/450 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+++NSMT++KELF P V GKVGMYVCGVT YD SH+GHARA V+FD+LYRYL+ L EV
Sbjct: 48 LQLFNSMTKKKELFVPRVEGKVGMYVCGVTPYDFSHVGHARAYVAFDVLYRYLKFLGYEV 107
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTD+DDKII+RAN GE SLS+R+ E+L D+A+LQCLPPT++PRV++H+E I
Sbjct: 108 DYVRNFTDIDDKIIKRANQNGETVTSLSSRFITEFLADVAELQCLPPTHEPRVTEHIENI 167
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+IT+II N AYVV+GDV+F+V+ P Y LSG+ L++NRAG RVAVD+RKRNPADFA
Sbjct: 168 IKLITEIIKNGKAYVVDGDVYFSVDNFPEYLSLSGRILDHNRAGSRVAVDTRKRNPADFA 227
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEPSW+SPWG GRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENE+AQS
Sbjct: 228 LWKAAKEGEPSWESPWGNGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHENELAQS 287
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +S V WMHNG + +++KMSKS+ NFFTIR I YHPLALR FL+ HY+S
Sbjct: 288 RAAYPESEVKCWMHNGFINIDDQKMSKSVNNFFTIRDIITLYHPLALRFFLMRTHYKSDA 347
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+ ASD V+YI+QTL DC+ +S +E +A + + ++ F MS
Sbjct: 348 NHSDKALEIASDRVYYIFQTLYDCDEVVSLHREENTSAPVPAEEQKLVDDHHKAFLESMS 407
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL--------------------- 417
DDL T+ +L G F + LK IN +LN LKK Q K +Q
Sbjct: 408 DDLRTTDVLDG-FMELLKAINGNLNDLKKLQQKLEQQKKKQQQQKKQQQKQQRPQKQPED 466
Query: 418 -IESLRKIENEVKEVLRILGLLPPGAYSEV 446
I++L + E+K L ILGL+PP +EV
Sbjct: 467 HIQALNALGAEIKHKLSILGLMPPSPLAEV 496
>gi|357114089|ref|XP_003558833.1| PREDICTED: cysteinyl-tRNA synthetase-like isoform 1 [Brachypodium
distachyon]
Length = 562
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 256/449 (57%), Positives = 312/449 (69%), Gaps = 23/449 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L ++NSMT++KE F P V GKVGMYVCGVT YD SH+GHARA V+FD+LYRYL+ L EV
Sbjct: 49 LHLFNSMTKKKEPFVPRVEGKVGMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGYEV 108
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTD+DDKII RAN GE SLS R+ E+L+DMA LQCLPPT +PRV++H+E I
Sbjct: 109 EYVRNFTDIDDKIIDRANKAGETVTSLSTRFINEFLIDMAKLQCLPPTCEPRVTEHIEHI 168
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I +II ND AYV +GDVFF+++ P Y LSG+ L++NR G RVAVD RKRN DFA
Sbjct: 169 IDLIAEIIKNDKAYV-DGDVFFSIDSFPEYNSLSGRNLDDNRPGSRVAVDPRKRNRNDFA 227
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENE+AQS
Sbjct: 228 LWKAAKEGEPFWESPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHENELAQS 287
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA DS V WMHNG V ++EKMSKSL NFF+IR+I YHPLALR FL+ HY+S +
Sbjct: 288 RAAYPDSEVKCWMHNGFVNKDDEKMSKSLNNFFSIREIITLYHPLALRFFLMRTHYKSDV 347
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+ ASD V+YIYQTL DC+ LS ++E + + + +++ F MS
Sbjct: 348 NHSDKALEIASDRVYYIYQTLHDCDEVLSLYREENISVPVPDEEQKLVDEHHTAFLDSMS 407
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL--------------------- 417
DDL T+ +L G F LK INS+LN KK Q K +Q
Sbjct: 408 DDLRTTDVLDG-FMGLLKAINSNLNDFKKLQQKLEQQKKKQQQKKQQQKQQRPQKQPEDH 466
Query: 418 IESLRKIENEVKEVLRILGLLPPGAYSEV 446
I++L +E E+K L ILGL+PP + EV
Sbjct: 467 IQALISLEAEIKNKLSILGLMPPSSLVEV 495
>gi|357114091|ref|XP_003558834.1| PREDICTED: cysteinyl-tRNA synthetase-like isoform 2 [Brachypodium
distachyon]
Length = 548
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/436 (56%), Positives = 304/436 (69%), Gaps = 10/436 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L ++NSMT++KE F P V GKVGMYVCGVT YD SH+GHARA V+FD+LYRYL+ L EV
Sbjct: 49 LHLFNSMTKKKEPFVPRVEGKVGMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGYEV 108
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTD+DDKII RAN GE SLS R+ E+L+DMA LQCLPPT +PRV++H+E I
Sbjct: 109 EYVRNFTDIDDKIIDRANKAGETVTSLSTRFINEFLIDMAKLQCLPPTCEPRVTEHIEHI 168
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I +II ND AYV +GDVFF+++ P Y LSG+ L++NR G RVAVD RKRN DFA
Sbjct: 169 IDLIAEIIKNDKAYV-DGDVFFSIDSFPEYNSLSGRNLDDNRPGSRVAVDPRKRNRNDFA 227
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENE+AQS
Sbjct: 228 LWKAAKEGEPFWESPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHENELAQS 287
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA DS V WMHNG V ++EKMSKSL NFF+IR+I YHPLALR FL+ HY+S +
Sbjct: 288 RAAYPDSEVKCWMHNGFVNKDDEKMSKSLNNFFSIREIITLYHPLALRFFLMRTHYKSDV 347
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+ ASD V+YIYQTL DC+ LS ++E + + + +++ F MS
Sbjct: 348 NHSDKALEIASDRVYYIYQTLHDCDEVLSLYREENISVPVPDEEQKLVDEHHTAFLDSMS 407
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL---------IESLRKIENEVK 429
DDL T+ +L G K++Q KQQQ I++L +E E+K
Sbjct: 408 DDLRTTDVLDGFMGLLKLQQKLEQQKKKQQQKKQQQKQQRPQKQPEDHIQALISLEAEIK 467
Query: 430 EVLRILGLLPPGAYSE 445
L ILGL+PP + E
Sbjct: 468 NKLSILGLMPPSSLVE 483
>gi|302803761|ref|XP_002983633.1| hypothetical protein SELMODRAFT_119009 [Selaginella moellendorffii]
gi|300148470|gb|EFJ15129.1| hypothetical protein SELMODRAFT_119009 [Selaginella moellendorffii]
Length = 502
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 237/419 (56%), Positives = 305/419 (72%), Gaps = 13/419 (3%)
Query: 25 MTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNF 84
M+++KE+F P + GK+ MYVCGVTAYD SH+GHAR V FD+LYRY + EVTYVRNF
Sbjct: 1 MSREKEVFRPRIPGKLSMYVCGVTAYDYSHIGHARVYVFFDVLYRYFPFMGYEVTYVRNF 60
Query: 85 TDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQ 144
TD+DDKII+RANDLG++P+ LSNR+C E+ DMA L+CL P+ +PRVS +++QI MI+Q
Sbjct: 61 TDIDDKIIKRANDLGDDPIELSNRFCDEFHRDMASLRCLAPSLEPRVSRNIDQIIKMISQ 120
Query: 145 IINNDCAYVVE-GDVFFAVEK-----SPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I+ N YV++ GDV+F+++K +YGRLSG++L++NRAGERVAVD RK NP DF
Sbjct: 121 ILENGYGYVLDNGDVYFSLDKFVPAFPDSYGRLSGRKLDDNRAGERVAVDDRKLNPGDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA GEPSW+SPWG GRPGWHIECSAMS L S FDIHGGG+DLIFPHHENEI QS
Sbjct: 181 LWKAN--GEPSWESPWGAGRPGWHIECSAMSGATLGSSFDIHGGGMDLIFPHHENEIVQS 238
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AAC +SNV+YWMHNG VT ++EKMSKSLGNFFTIR++ E YHPLALR FL+ HYRSP+
Sbjct: 239 RAACHESNVTYWMHNGFVTVDSEKMSKSLGNFFTIREVFELYHPLALRWFLLCTHYRSPI 298
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
NYS QL +AS +FY+YQTL D + + Q+ K+ ++ A + LR + ++
Sbjct: 299 NYSESQLQNASQRLFYLYQTLFDAKRCVEGSQKEEKSYVVSQKAAEIAKALRLSLRSSLA 358
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DDLNT + GA + LK +N L+ K ++ K S SL + EV++ L +LG
Sbjct: 359 DDLNTP-VTIGALSEPLKLMNELLHSKKGRKDK----SRYSSLDLLRLEVEQALEVLGF 412
>gi|302817808|ref|XP_002990579.1| hypothetical protein SELMODRAFT_131888 [Selaginella moellendorffii]
gi|300141747|gb|EFJ08456.1| hypothetical protein SELMODRAFT_131888 [Selaginella moellendorffii]
Length = 492
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/419 (56%), Positives = 306/419 (73%), Gaps = 13/419 (3%)
Query: 25 MTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNF 84
M+++KE+F P + GK+ MYVCGVTAYD SH+GHAR V FD+LYRY + EVTYVRNF
Sbjct: 1 MSREKEVFRPRIHGKLSMYVCGVTAYDYSHIGHARVYVFFDVLYRYFTFMGYEVTYVRNF 60
Query: 85 TDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQ 144
TD+DDKII+RANDLG++P+ LSNR+C E+ DMA L+CL P+ +PRVS +++QI MI+Q
Sbjct: 61 TDIDDKIIKRANDLGDDPIELSNRFCDEFRRDMASLRCLAPSLEPRVSRNIDQIIKMISQ 120
Query: 145 IINNDCAYVVE-GDVFFAVEKS----PN-YGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I+ N YV++ GDV+F+++K P+ YGRLSG++L++NRAGERVAVD RK NP DF
Sbjct: 121 ILENGYGYVLDNGDVYFSLDKFVPAFPDCYGRLSGRKLDDNRAGERVAVDDRKLNPGDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA GEPSW+SPWG GRPGWHIECSAMS L S FDIHGGG+DLIFPHHENEI QS
Sbjct: 181 LWKAN--GEPSWESPWGAGRPGWHIECSAMSGATLGSSFDIHGGGMDLIFPHHENEIVQS 238
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AAC +SN++YWMHNG VT ++EKMSKSLGNFFTIR++ E YHPLALR FL+ HYRSP+
Sbjct: 239 RAACHESNITYWMHNGFVTVDSEKMSKSLGNFFTIREVFELYHPLALRWFLLCTHYRSPI 298
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
NYS QL +AS +FY+YQTL D + + Q+ K+ ++ A + LR + ++
Sbjct: 299 NYSESQLQNASQRLFYLYQTLFDAKRCVEGSQKEEKSYVVSQKAAENAKALRLSLRSSLA 358
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DDLNT + GA + LK +N L+ + ++ K S SL + EV++ L +LG
Sbjct: 359 DDLNTP-VTIGALSEPLKLMNELLHSKRGRKDK----SRYSSLDLLRLEVEQALEVLGF 412
>gi|297610616|ref|NP_001064785.2| Os10g0463100 [Oryza sativa Japonica Group]
gi|22758318|gb|AAN05522.1| putative cysteinyl-tRNA synthetase [Oryza sativa Japonica Group]
gi|255679472|dbj|BAF26699.2| Os10g0463100 [Oryza sativa Japonica Group]
Length = 520
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/429 (54%), Positives = 309/429 (72%), Gaps = 2/429 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+++++ T+ F P V GKV MYVCGVT YD SH+GHARA V+FD+L+RYL++L EV
Sbjct: 22 LRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLKYLGYEV 81
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTD+DDKII+RAN+ GE+ LSLS+R+ E+ DM +LQCLPPT++PRV+ H+EQI
Sbjct: 82 NYVRNFTDIDDKIIKRANEAGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQI 141
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+IT+I++N AY +EGDV+F+V+ P+Y LSG++++ NR G RVAVD+RKRNPADFA
Sbjct: 142 IDLITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDARKRNPADFA 201
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEPSW+SPWG GRPGWHIECSAMSAHYL + FDIHGGG DLIFPHHENE+AQS
Sbjct: 202 LWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFPHHENELAQS 261
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +S V WMHNG V + +KM+K+ NFFTIR I YHP+ALR FL+ HYRS +
Sbjct: 262 QAAYPESEVKCWMHNGFVNKDGQKMAKADKNFFTIRDIISLYHPMALRLFLMRTHYRSDV 321
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L AS ++YIYQTL D E +S + EH I + I + R F +MS
Sbjct: 322 NHSDTALQFASGRLYYIYQTLHDGEETVSLYGEHKLENSIPADDQKLIEENRSNFLEKMS 381
Query: 379 DDLNTSHILTG--AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
DDL+T+ L Q L+ + +++Q +++ I++L ++NEV + L ILG
Sbjct: 382 DDLHTTAALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSILG 441
Query: 437 LLPPGAYSE 445
L+P + +E
Sbjct: 442 LMPMSSLAE 450
>gi|218184692|gb|EEC67119.1| hypothetical protein OsI_33924 [Oryza sativa Indica Group]
Length = 523
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 232/430 (53%), Positives = 308/430 (71%), Gaps = 2/430 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+++++ T+ F P V GKV MYVCGVT YD SH+GHARA V+FD+L+RYL++L EV
Sbjct: 22 LRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLKYLGYEV 81
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTD+DDKII+RAN+ GE+ LSLS+R+ E+ DM +LQCLPPT++PRV+ H+EQI
Sbjct: 82 NYVRNFTDIDDKIIKRANEAGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQI 141
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+IT+I++N AY +EGDV+F+V+ P+Y LSG++++ NR G RVAVD+RKRNPADFA
Sbjct: 142 IDLITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDARKRNPADFA 201
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEPSW+SPWG GRPGWHIECSAMSAHYL + FDIHGGG DLIFPHHENE+AQS
Sbjct: 202 LWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFPHHENELAQS 261
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +S V WMHNG V + +KM+K+ NFFTIR I YHP+ALR FL+ HYRS +
Sbjct: 262 QAAYPESEVKCWMHNGFVNKDGQKMAKADKNFFTIRDIISLYHPMALRLFLMRTHYRSDV 321
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L AS ++YIYQTL D E +S + EH I + I + F +MS
Sbjct: 322 NHSDTALQFASGRLYYIYQTLHDGEETVSLYGEHKLENSIPADDQKLIEENHSNFLEKMS 381
Query: 379 DDLNTSHILTG--AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
DDL+T+ L Q L+ + +++Q +++ I++L ++NEV + L ILG
Sbjct: 382 DDLHTTAALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSILG 441
Query: 437 LLPPGAYSEV 446
L+P + +E
Sbjct: 442 LMPMSSLAEA 451
>gi|108706133|gb|ABF93928.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
Length = 338
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/321 (66%), Positives = 258/321 (80%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+++NSMT++KELF P+V GKV MYVCGVT YD SH+GHARA V+FD+LYRYL+ L EV
Sbjct: 11 LELFNSMTKKKELFEPLVEGKVRMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGYEV 70
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTD+DDKII+RAN+ GE SLS+R+ E+L+DMA LQCLPPT +PRV+DH+E I
Sbjct: 71 EYVRNFTDIDDKIIKRANEAGETVTSLSSRFINEFLLDMAQLQCLPPTCEPRVTDHIEHI 130
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++IT+I+ N AY +EGDV+F+V+ P Y LSG++L++N AG RVAVD+RKRNPADFA
Sbjct: 131 IELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKLDHNLAGSRVAVDTRKRNPADFA 190
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP WDSPWG GRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENE+AQS
Sbjct: 191 LWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHENELAQS 250
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +S V WMHNG V +++KMSKS NFFTIR I + YHP+ALR FL+ HYR +
Sbjct: 251 RAAYPESEVKCWMHNGFVNKDDQKMSKSDKNFFTIRDIIDLYHPMALRFFLMRTHYRGDV 310
Query: 319 NYSVLQLDSASDAVFYIYQTL 339
N+S L+ ASD V+YIYQ L
Sbjct: 311 NHSDKALEIASDRVYYIYQVL 331
>gi|357140592|ref|XP_003571849.1| PREDICTED: LOW QUALITY PROTEIN: cysteinyl-tRNA synthetase-like
[Brachypodium distachyon]
Length = 532
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/455 (51%), Positives = 300/455 (65%), Gaps = 37/455 (8%)
Query: 23 NSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVR 82
++ + E+F P+V GKV MYVCGVT YD SH+GHARA V+FD+LYRYL+ L EV YV
Sbjct: 10 DAAVPETEVFRPVVEGKVSMYVCGVTTYDFSHVGHARAYVAFDVLYRYLKCLGYEVQYVH 69
Query: 83 NFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMI 142
NFTD+DDKIIRRAN+ GE +LS+R+ E+L DM LQCLPPT++PRV+DH++QI D+I
Sbjct: 70 NFTDIDDKIIRRANEAGETATNLSSRFIDEFLHDMVQLQCLPPTHEPRVTDHIKQIIDLI 129
Query: 143 TQIINNDCAYVVEGD-VFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWK 201
T+I D AYV+EG+ V+F+V+ P Y LSG++LE+N G RVA+D+RKRNPADFALWK
Sbjct: 130 TKIKGKDKAYVIEGEGVYFSVDNFPEYLSLSGRKLEHNLPGSRVAIDTRKRNPADFALWK 189
Query: 202 AAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAA 261
+AK GEP W+SPWG GRPGWHIECSAMS HYL FDIHGGG DLIFPHHENE+AQS AA
Sbjct: 190 SAKDGEPFWESPWGRGRPGWHIECSAMSEHYLGQLFDIHGGGKDLIFPHHENELAQSRAA 249
Query: 262 CQDSNVSY--WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLN 319
S V WMHNG V NN +KM+K NFFTI I YHP+ALR FL+ HYRS +N
Sbjct: 250 NSKSEVKLECWMHNGFVNNNGQKMAKPDKNFFTI-DIISLYHPMALRLFLMRTHYRSDVN 308
Query: 320 YSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSD 379
S L+ AS V+YIYQTLQD + +S + + + + ++K +EF M++
Sbjct: 309 QSDTALEFASGRVYYIYQTLQDSQEVISLYCDDKLDFPVPTGDQAVVDKNHEEFLKHMAN 368
Query: 380 DLNTSHILTGAFQDALK---FINSSLNMLKKKQPK------------------------- 411
DL+T GA + +K IN++L+ LKK Q K
Sbjct: 369 DLHTK----GALDELMKPIXAINNNLSDLKKLQQKLEQEKKKQAVKKQQQQQTEEGKQQA 424
Query: 412 -QQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 445
+Q +++L + EV L ILGL+P + +E
Sbjct: 425 QKQTGHYVQALVALHGEVTSKLSILGLMPXPSLAE 459
>gi|222612964|gb|EEE51096.1| hypothetical protein OsJ_31805 [Oryza sativa Japonica Group]
Length = 561
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/470 (47%), Positives = 303/470 (64%), Gaps = 43/470 (9%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+++++ T+ F P V GKV MYVCGVT YD SH+GHARA V+FD+L+RYL++L E+
Sbjct: 22 LRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLKYLGFEI 81
Query: 79 T-----------------------------------------YVRNFTDVDDKIIRRAND 97
++ D+ KII+RAN+
Sbjct: 82 IKRANEAGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDLITKIIKRANE 141
Query: 98 LGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGD 157
GE+ LSLS+R+ E+ DM +LQCLPPT++PRV+ H+EQI D+IT+I++N AY +EGD
Sbjct: 142 AGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDLITKIMDNGKAYTIEGD 201
Query: 158 VFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPG 217
V+F+V+ P+Y LSG++++ NR G RVAVD+RKRNPADFALWK+AK GEPSW+SPWG G
Sbjct: 202 VYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDARKRNPADFALWKSAKEGEPSWESPWGRG 261
Query: 218 RPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVT 277
RPGWHIECSAMSAHYL + FDIHGGG DLIFPHHENE+AQS AA +S V WMHNG V
Sbjct: 262 RPGWHIECSAMSAHYLGNIFDIHGGGKDLIFPHHENELAQSQAAYPESEVKCWMHNGFVN 321
Query: 278 NNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQ 337
+ +KM+K+ NFFTIR I YHP+ALR FL+ HYRS +N+S L AS ++YIYQ
Sbjct: 322 KDGQKMAKADKNFFTIRDIISLYHPMALRLFLMRTHYRSDVNHSDTALQFASGRLYYIYQ 381
Query: 338 TLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG--AFQDAL 395
TL D E +S + EH I + I + R F +MSDDL+T+ L Q L
Sbjct: 382 TLHDGEETVSLYGEHKLENSIPADDQKLIEENRSNFLEKMSDDLHTTAALDHLMKLQQKL 441
Query: 396 KFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 445
+ + +++Q +++ I++L ++NEV + L ILGL+P + +E
Sbjct: 442 EHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSILGLMPMSSLAE 491
>gi|110289208|gb|AAP54161.2| tRNA synthetase class I family protein, putative, expressed [Oryza
sativa Japonica Group]
Length = 491
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/429 (50%), Positives = 290/429 (67%), Gaps = 31/429 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+++++ T+ F P V GKV MYVCGVT YD SH+GHARA V+FD+L+RYL++L EV
Sbjct: 22 LRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLKYLGYEV 81
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTD+DDKII+RAN+ GE+ LSLS+R+ E+ DM +LQCLPPT++PRV+ H+EQI
Sbjct: 82 NYVRNFTDIDDKIIKRANEAGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQI 141
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+IT+I++N AY +EGDV+F+V+ P+Y LSG++++ NR G RVAVD+RKRNPADFA
Sbjct: 142 IDLITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDARKRNPADFA 201
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEPSW+SPWG GRPGWHIECSAMSAHYL + FDIHGGG DLIFPHHENE+AQS
Sbjct: 202 LWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFPHHENELAQS 261
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +S +I YHP+ALR FL+ HYRS +
Sbjct: 262 QAAYPES-----------------------------EIISLYHPMALRLFLMRTHYRSDV 292
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L AS ++YIYQTL D E +S + EH I + I + R F +MS
Sbjct: 293 NHSDTALQFASGRLYYIYQTLHDGEETVSLYGEHKLENSIPADDQKLIEENRSNFLEKMS 352
Query: 379 DDLNTSHILTG--AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
DDL+T+ L Q L+ + +++Q +++ I++L ++NEV + L ILG
Sbjct: 353 DDLHTTAALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSILG 412
Query: 437 LLPPGAYSE 445
L+P + +E
Sbjct: 413 LMPMSSLAE 421
>gi|255083368|ref|XP_002504670.1| cysteine-trna ligase [Micromonas sp. RCC299]
gi|226519938|gb|ACO65928.1| cysteine-trna ligase [Micromonas sp. RCC299]
Length = 522
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/442 (48%), Positives = 289/442 (65%), Gaps = 27/442 (6%)
Query: 18 TLKIYNSMTQQKELFTP--IVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLK 75
TL ++N+M ++KE F+P KV MYVCGVT YD SH+GHAR V+FD+LYR L +
Sbjct: 9 TLMLHNTMARRKEPFSPRDSTGKKVNMYVCGVTVYDYSHIGHARVYVAFDVLYRQLTRMG 68
Query: 76 CEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHM 135
+VTY RNFTDVDDKII+RAN+ GE +L +R+ + D+ L CL PT +PR +DH+
Sbjct: 69 YDVTYCRNFTDVDDKIIKRANENGEECDALVDRFIAAFHEDIDALGCLRPTIEPRATDHI 128
Query: 136 EQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+ I M ++I AY +GDV+F+V+ P YG LSG++ E+NRAGERVAVD RK+NPA
Sbjct: 129 KDIVTMCERLIEKGYAYPADGDVYFSVDALPEYGSLSGRKQEDNRAGERVAVDDRKKNPA 188
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DFALWKAAK GEP+WDSPWG GRPGWHIECSAM L DIHGGG DL+FPHHENE+
Sbjct: 189 DFALWKAAKPGEPTWDSPWGAGRPGWHIECSAMIDSILGKSIDIHGGGQDLVFPHHENEL 248
Query: 256 AQSCAAC----------QDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 305
AQS A+C ++ V YW+HNG V ++EKMSKSLGNFFTIR++TE+YHP AL
Sbjct: 249 AQSTASCRCCATDGDEPEEPFVRYWVHNGFVKVDSEKMSKSLGNFFTIREVTEKYHPFAL 308
Query: 306 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP----- 360
R L+ HYR+P+NY+ L+ ASD ++Y+YQTL D VAL+ + A +
Sbjct: 309 RWMLLGTHYRAPINYTQRALEEASDRLYYLYQTLVDSRVALTEAEASATDAEVKGKPKPP 368
Query: 361 ---AAE--DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 415
AAE + + + + ++DDLNT + + LK +N ++ K K+ + +
Sbjct: 369 TGVAAEGIELAVETKAAVASALTDDLNTP-LAMASLSSPLKTLNDLVSTKKGKKAVGRNV 427
Query: 416 SLIESLRKIENEVKEVLRILGL 437
+LR + V+E L +GL
Sbjct: 428 ----ALRDLVKTVEETLEAVGL 445
>gi|215697564|dbj|BAG91558.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/333 (61%), Positives = 254/333 (76%), Gaps = 10/333 (3%)
Query: 117 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 176
MA+L CLPP+ +PRVSDH++QI +MI QII+NDCAY + GDV+F+VE P YG LSG++L
Sbjct: 1 MANLHCLPPSVEPRVSDHIDQIINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKL 60
Query: 177 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 236
++NRAGERVAVD RK+NPADFALWKAAK GEPSWDSPWGPGRPGWHIECSAMSAHYL
Sbjct: 61 DDNRAGERVAVDERKKNPADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHS 120
Query: 237 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 296
FDIHGGG DLIFPHHENEIAQS AAC DS+++YW+HNG V N++KMSKSLGNF TIR++
Sbjct: 121 FDIHGGGEDLIFPHHENEIAQSRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKV 180
Query: 297 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKT 355
TE YHPLALR FL+ HYRSP+NY++ QL+ ASD ++Y YQTLQDCE + Q + G
Sbjct: 181 TELYHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLQDCEESCQQHQSKAGDP 240
Query: 356 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQ 414
+N +CI KL DEF MSDDL+TS + A + LK +N L+ K KKQ K+
Sbjct: 241 LPVN--TTNCIQKLHDEFETSMSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQEKR-- 295
Query: 415 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVK 447
+ESL +E +++ VL +LGLLP Y ++
Sbjct: 296 ---LESLSAMEEKIRMVLSVLGLLPSSYYEALQ 325
>gi|384251815|gb|EIE25292.1| tRNA synthetase class I (C) family protein [Coccomyxa
subellipsoidea C-169]
Length = 536
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/431 (50%), Positives = 279/431 (64%), Gaps = 17/431 (3%)
Query: 19 LKIYNSMTQQKELFTPI--VRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
L ++N+M+ +KELF P KV MY CGVT YD SH+GHAR +FD+L+RYL HL
Sbjct: 32 LWLHNTMSGRKELFQPRPGQGNKVSMYCCGVTVYDYSHVGHARVYCAFDVLFRYLRHLGY 91
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YVRNFTD+DDKII+RA++ GE+PL LS R+ E+ DM L CL PT +P+ +D +
Sbjct: 92 EVDYVRNFTDIDDKIIKRASETGEDPLQLSQRFIHEFHTDMDALNCLAPTSEPKATDFIS 151
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
Q+ DMI +I+ Y +G V+F+VE P YGRLSG+ L++NRAGERVAV++ KRNPAD
Sbjct: 152 QMVDMIGRIVKAGHGYEADGSVWFSVESVPGYGRLSGRSLDDNRAGERVAVNTTKRNPAD 211
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GEP WDSPWGPGRPGWHIECSAM + DIHGGG DLI PHH+NE+
Sbjct: 212 FVLWKAAKVGEPKWDSPWGPGRPGWHIECSAMIRELMGPIIDIHGGGRDLIHPHHDNELV 271
Query: 257 QSCAA---CQDSN-------VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 306
QS AA C N V +WMH G V ++EKMSKSLGNFFTIR + + YHP+ALR
Sbjct: 272 QSQAAACECDRENMLDHRDFVRWWMHLGFVNVDSEKMSKSLGNFFTIRDVLQMYHPMALR 331
Query: 307 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI 366
FLI+ YR +NY+ L ASD ++YIYQTLQD E AL+ G+ +
Sbjct: 332 WFLINTQYRQAINYTERSLQEASDRLYYIYQTLQDAEAALTAAAAAGEQVSVATEQHSNG 391
Query: 367 NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 426
KL A + DDLNT A + LK +N L+ K K+ + ++++ ++
Sbjct: 392 TKLLKSVEASLCDDLNTPQAFA-ALSEPLKTMNDLLHTKKGKKAGGR----LQTIATLQQ 446
Query: 427 EVKEVLRILGL 437
+ VL +LGL
Sbjct: 447 ALNSVLELLGL 457
>gi|337286143|ref|YP_004625616.1| cysteinyl-tRNA synthetase [Thermodesulfatator indicus DSM 15286]
gi|335358971|gb|AEH44652.1| cysteinyl-tRNA synthetase [Thermodesulfatator indicus DSM 15286]
Length = 498
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/395 (51%), Positives = 273/395 (69%), Gaps = 4/395 (1%)
Query: 16 DLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLK 75
D+ +K N++T++KE+F P+ +V MY CGVTAYD SHLGHARAAV FD+L+R+L+ L
Sbjct: 3 DIEIKFQNTLTRKKEVFEPLSPPRVTMYACGVTAYDESHLGHARAAVVFDVLFRFLKFLG 62
Query: 76 CEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHM 135
EV YVRN+TD+DDKII+RA ++G +P L+ RY + Y DM L+ L PTY+P+ ++H+
Sbjct: 63 FEVIYVRNYTDIDDKIIKRAYEVGVSPKELAERYIKSYDEDMKALKVLRPTYEPKATEHI 122
Query: 136 EQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
QI +I +I AYV +GDV+F+VEK P YG+LSG+ LE +AG R+AV +KR+P
Sbjct: 123 PQIIALIETLIKKGFAYVADGDVYFSVEKFPEYGKLSGRNLEELKAGARIAVSEKKRHPL 182
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DFALWKA K GEPSWDSPWG GRPGWHIECSAM+ +YL DIHGGG+DLIFPHHENEI
Sbjct: 183 DFALWKAEKPGEPSWDSPWGRGRPGWHIECSAMAMYYLGETIDIHGGGLDLIFPHHENEI 242
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA V YW+HNG VT EKMSKSLGNF TI+Q+ R+HP A+R FL+S HYR
Sbjct: 243 AQSEAATGKPFVRYWLHNGMVTVGREKMSKSLGNFVTIKQMLSRHHPEAIRLFLLSMHYR 302
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDEF 373
SPL+Y+ + A+ +Y+TL E L P E + A+ + I ++F
Sbjct: 303 SPLDYTEKVVSDHEKALEGLYETLYLIE-KLRPSSEKAPENQQKNLAKISETIKNFENDF 361
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK 408
+ ++DDLNT+ + G+ K +N+ L + +K
Sbjct: 362 ISALADDLNTARAI-GSLFSLEKALNNLLKLCARK 395
>gi|307104948|gb|EFN53199.1| hypothetical protein CHLNCDRAFT_137034 [Chlorella variabilis]
Length = 606
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/453 (49%), Positives = 280/453 (61%), Gaps = 39/453 (8%)
Query: 19 LKIYNSMTQQKELFTPIV--RGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
L ++N++T+QKE+F P +V MYVCGVT YD SH+GHARA V+FD++YR L HL
Sbjct: 74 LLLHNTLTRQKEVFRPRADQGNRVSMYVCGVTVYDYSHIGHARAYVAFDVIYRLLRHLGY 133
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
VTYVRNFTDVDDKII RA GE PL+L+ R+ E+ DM L CLPP +PR ++++
Sbjct: 134 AVTYVRNFTDVDDKIIARAAAAGEEPLALARRFIAEFHADMELLGCLPPDLEPRATEYIP 193
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI +II++ AY V GDVFF V P YGRLSG+ E+NRAGERVAVD RKR AD
Sbjct: 194 HMVAMIQRIIDHGHAYAVGGDVFFDVASLPGYGRLSGRSQEDNRAGERVAVDERKRGAAD 253
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GEP+W+SPWGPGRPGWHIECSAM L DIHGGG DL+FPHHENE+A
Sbjct: 254 FALWKAAKPGEPTWESPWGPGRPGWHIECSAMIREVLGEVIDIHGGGRDLVFPHHENELA 313
Query: 257 QSCAAC--------------------------QDSNVSYWMHNGHVTNNNEKMSKSLGNF 290
QS AA QD V YW+HNG V ++EKMSKSLGNF
Sbjct: 314 QSRAASGACSCGHDHGAATASASASNGSGGGGQDEFVRYWLHNGFVNVDSEKMSKSLGNF 373
Query: 291 FTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ 350
FTIR++ +YHP ALR FL+ YR P+NY+ L+ ASD VFY+YQTL D L +
Sbjct: 374 FTIREVVAQYHPRALRWFLVGTQYRQPINYTQRALEEASDRVFYLYQTLADMGAVLDGGE 433
Query: 351 EHGKTARINPAAEDCI------NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNM 404
E + L E A ++DD+NT + AF LK N ++
Sbjct: 434 EGQAALAAARQQLAAPAAAASGSGLLAEVQAALTDDVNTP-LAIAAFSAPLKSANDLVHT 492
Query: 405 LKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
K K +Q +++L + ++ L++LGL
Sbjct: 493 KKGK----KQAGRLQALAECYAALETCLQLLGL 521
>gi|118578479|ref|YP_899729.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
gi|171704442|sp|A1AK01.1|SYC_PELPD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|118501189|gb|ABK97671.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
Length = 493
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/440 (49%), Positives = 279/440 (63%), Gaps = 11/440 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L+IYN++T +K+ F P+ GK GMYVCGVT YD H+GHARA V FD++YRYL +
Sbjct: 1 MALRIYNTLTGEKDTFVPLHPGKAGMYVCGVTVYDYCHIGHARANVVFDVIYRYLGYSGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
VTYVRNFTD+DDKII RAN G + ++S RY + + DMA L PT +P+ +DHM
Sbjct: 61 AVTYVRNFTDIDDKIINRANQEGVDYTTISERYIEAFNQDMARLGLAKPTVEPKATDHMG 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I +I +I AY +GDV++AVE P+Y RLSG+ LE+ AG RV VD RKRNP D
Sbjct: 121 GIISVIETLIAKGHAYESDGDVYYAVESFPSYLRLSGRNLEDMLAGARVEVDDRKRNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK +K GEPSWDSPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKGSKPGEPSWDSPWGAGRPGWHIECSAMSMEYLGKTFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YWMHNG V N+EKMSKSLGNFFTIR++ E+Y P LR F++SAHYRS
Sbjct: 241 QSEAANGCQFVRYWMHNGFVNINSEKMSKSLGNFFTIREVLEQYDPETLRFFILSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALS----PFQEHGKTARINPAAEDCINKLR-- 370
P+++S L+ A + IY L + A+ P Q + A + PA + KL+
Sbjct: 301 PIDFSDQNLNDAQAGLERIYSCLAAVDGAMEGQDVPNQPV-EGAPLPPAGAELHEKLQSL 359
Query: 371 -DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
F M DD NT+ L G +A++ N + + P L+L+ +R++ E
Sbjct: 360 ISRFREAMDDDFNTAQAL-GVLFEAVRATNRFMAESGDQTPA--TLALLGQVRRLFAETG 416
Query: 430 EVLRILGLLPPGAYSEVKTA 449
+VL + P +K A
Sbjct: 417 DVLGLFTSQPAAWLESIKQA 436
>gi|412992649|emb|CCO18629.1| cysteinyl-tRNA synthetase [Bathycoccus prasinos]
Length = 657
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/440 (48%), Positives = 283/440 (64%), Gaps = 26/440 (5%)
Query: 18 TLKIYNSMTQQKELFTPIVRG--KVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLK 75
TL ++N+M+++KE+F P KV MYVCGVT YD SH+GHAR V+FD+LYR L L
Sbjct: 144 TLMLHNTMSRKKEIFKPRAENGNKVQMYVCGVTVYDYSHIGHARVYVAFDVLYRTLRQLG 203
Query: 76 CEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHM 135
+VTY RNFTD+DDKII RAN+ G + L+ ++ Q + DM L CL P +PR + H+
Sbjct: 204 YDVTYCRNFTDIDDKIINRANESGTSCEELTEKFIQAFHEDMEALGCLRPDLEPRATQHV 263
Query: 136 EQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
I D+IT++I + AY V+GDV+F+V+ YG LSG+ E+NRAGERV VD RK+NPA
Sbjct: 264 GDIIDLITRLIEKNHAYAVDGDVYFSVDSLSKYGSLSGRNQEDNRAGERVVVDGRKKNPA 323
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DFALWK AK EP W+SPWG GRPGWHIECSAM L DIHGGG DL+FPHHENE+
Sbjct: 324 DFALWKTAKPNEPVWESPWGNGRPGWHIECSAMIEKLLGPVIDIHGGGQDLVFPHHENEL 383
Query: 256 AQSCAAC-------QDSN-VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 307
AQS AAC +D V YW+HNG V ++EKMSKSLGNFFTIR++ RYHP+ LR
Sbjct: 384 AQSSAACDCEIHKSEDKKFVRYWVHNGFVKVDSEKMSKSLGNFFTIREVLARYHPMVLRF 443
Query: 308 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA------RINPA 361
L+ AHYR+P+NY+ L+ +SD ++YIYQTL D AL E + +++P
Sbjct: 444 MLLGAHYRAPINYTQKALEESSDRLYYIYQTLLDARAALELKDEEFRAELENSKLKLSPL 503
Query: 362 AEDCINKLRDEFHARMS----DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 417
A D KL +E ++ DDLNT + + LK N L + ++ +
Sbjct: 504 AADA-KKLAEETKVSVAQALYDDLNTP-LAIASLSGPLKTTNDFLTT----KAGKKAVGR 557
Query: 418 IESLRKIENEVKEVLRILGL 437
+ +L + +E++ L ILGL
Sbjct: 558 LSALSSLVSELENTLSILGL 577
>gi|308808270|ref|XP_003081445.1| D84717 probable cysteinyl-tRNA synthetase (ISS) [Ostreococcus
tauri]
gi|116059908|emb|CAL55967.1| D84717 probable cysteinyl-tRNA synthetase (ISS) [Ostreococcus
tauri]
Length = 661
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/445 (47%), Positives = 284/445 (63%), Gaps = 21/445 (4%)
Query: 6 ETGTVAAPKMDLT-LKIYNSMTQQKELFTP--IVRGKVGMYVCGVTAYDLSHLGHARAAV 62
E+GT DLT L + N+MT++KELF P KV MYVCGVT YD SH+GHAR V
Sbjct: 149 ESGTEG---RDLTKLWLTNTMTRKKELFIPRDPAGKKVQMYVCGVTVYDYSHIGHARVYV 205
Query: 63 SFDLLYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQC 122
+FD+LYR L L +VTY RNFTD+DDKII+R+N+ GE +L+N++ + DM L C
Sbjct: 206 AFDVLYRRLMGLGYDVTYCRNFTDIDDKIIKRSNESGETCEALTNKFIDAFHEDMTALGC 265
Query: 123 LPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAG 182
L PT +PR ++ ++ I I ++I AY GDV+F+V+ P YG LSG++ ++NRAG
Sbjct: 266 LRPTLEPRATECVDDIIAFIERLIAKGNAYEASGDVYFSVDTLPAYGALSGRKQDDNRAG 325
Query: 183 ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGG 242
ERVAVD RK+NPADFALWK AK GEP+W SPWG GRPGWHIECSAM L DIHGG
Sbjct: 326 ERVAVDERKKNPADFALWKTAKPGEPTWTSPWGDGRPGWHIECSAMIEKMLGPTIDIHGG 385
Query: 243 GIDLIFPHHENEIAQSCAAC-----QDSN--VSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 295
G DL+FPHHENE+AQS AAC D N V YW+HNG V ++EKMSKSLGNFFTIR+
Sbjct: 386 GQDLVFPHHENELAQSSAACGCGAHADENPFVRYWVHNGFVKVDSEKMSKSLGNFFTIRE 445
Query: 296 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 355
+ ++YHP LR L+ AHYR+P+NY+ L+ ASD V+Y+YQTLQD +
Sbjct: 446 VLDKYHPFVLRFMLLGAHYRAPINYTQRALEEASDRVYYLYQTLQDVRSVIRDAAVEEDA 505
Query: 356 ARINPAAEDCI---NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 412
+ P D + N+ + ++DDLNT ++ L S+N + +
Sbjct: 506 TKPVPMVADALKLANETEKQVLESLNDDLNTPAVMA-----TLSAPLKSMNDFMTTKAGK 560
Query: 413 QQLSLIESLRKIENEVKEVLRILGL 437
+ + + +L+ + ++ VL +G+
Sbjct: 561 KAVGRVRALQALLTSIEGVLEAVGM 585
>gi|145330001|ref|NP_001077986.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|330253409|gb|AEC08503.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 401
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/330 (60%), Positives = 247/330 (74%), Gaps = 6/330 (1%)
Query: 117 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 176
M LQCL P+ QPRVSDH+ QI D+I QI++N AY V+GD++F+V+K P YG+LSG++L
Sbjct: 1 MEQLQCLDPSVQPRVSDHIPQIIDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKL 60
Query: 177 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 236
E+NRAGERVAVD+RK++PADFALWKAAK GEP W+SPWG GRPGWHIECSAMSA YL
Sbjct: 61 EDNRAGERVAVDTRKKHPADFALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYS 120
Query: 237 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 296
FDIHGGG+DL+FPHHENEIAQSCAAC SN+SYW+HNG VT ++EKMSKSLGNFFTIRQ+
Sbjct: 121 FDIHGGGMDLVFPHHENEIAQSCAACDSSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQV 180
Query: 297 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 356
+ YHPLALR FL+ HYRSP+NYS L+SAS+ +FYIYQTL DCE AL +
Sbjct: 181 IDLYHPLALRLFLMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESALGEKDSTFENG 240
Query: 357 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 416
+ IN R EF A MSDDL T L A + LK IN ++ K K+ +++
Sbjct: 241 SVPSDTLTSINTFRTEFVASMSDDLLTPVTL-AAMSEPLKTINDLIHTRKGKKQARRE-- 297
Query: 417 LIESLRKIENEVKEVLRILGLLPPGAYSEV 446
ESL+ +E +++VL ILGL+ P +YSEV
Sbjct: 298 --ESLKALETTIRDVLTILGLM-PTSYSEV 324
>gi|224031007|gb|ACN34579.1| unknown [Zea mays]
Length = 400
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/327 (61%), Positives = 249/327 (76%), Gaps = 14/327 (4%)
Query: 117 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 176
MA+LQCLPP+ +PRVSDH+++I +MI QI++N CAYVV GDV+F+V+ P YG LSG++L
Sbjct: 1 MANLQCLPPSVEPRVSDHVDEIINMIKQILDNRCAYVVGGDVYFSVDNFPEYGELSGRKL 60
Query: 177 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 236
++NRAGERVAVD RKRNPADFALWKAAK GEP WDSPWGPGRPGWHIECSAMSAHYL
Sbjct: 61 DDNRAGERVAVDERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHS 120
Query: 237 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 296
FDIHGGG DLIFPHHENEIAQS AAC DS ++YW+HNG V N++KMSKSLGNF TIR++
Sbjct: 121 FDIHGGGEDLIFPHHENEIAQSRAACCDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKV 180
Query: 297 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 356
E YHPLALR FL+ HYRSP+NY++ QL+ ASD ++Y YQTL+DCE +H ++
Sbjct: 181 IEMYHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLRDCE----EICQHQQSN 236
Query: 357 RINPAAEDCIN---KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQ 412
NP + +N KL DEF MSDDL+TS + A + LK +N L+ K KKQ K+
Sbjct: 237 TGNPLPANTLNYIQKLHDEFETSMSDDLHTS-VALAAMSEPLKVMNDLLHTRKGKKQDKR 295
Query: 413 QQLSLIESLRKIENEVKEVLRILGLLP 439
+ESL +E +++ VL +LGLLP
Sbjct: 296 -----LESLSALEEKIRVVLSVLGLLP 317
>gi|189423475|ref|YP_001950652.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
gi|229558717|sp|B3E1P0.1|SYC_GEOLS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|189419734|gb|ACD94132.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
Length = 487
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/427 (48%), Positives = 273/427 (63%), Gaps = 11/427 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L++YN+++ +KE F P V GKVGMYVCGVT YD H+GHARA + FD++YRYL
Sbjct: 1 MALRLYNTLSGEKEPFVPRVAGKVGMYVCGVTVYDFCHIGHARAGIVFDMIYRYLRFSGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTY+RN+TD+DDKII RAN G + ++++RY + DM L L PT +P+ +DH+E
Sbjct: 61 DVTYIRNYTDIDDKIINRANQEGTDYRTIADRYIATFDEDMDRLGMLRPTIEPKATDHIE 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I +I ++I+N AY V+GDV+FAVE P Y +LSG+ L++ AG RV VD RKRNP D
Sbjct: 121 DIISIIQRLIDNGHAYAVDGDVYFAVETFPAYLKLSGRNLDDMLAGARVDVDERKRNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK +K GEP W+SPWG GRPGWHIECSAMS +L FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKGSKPGEPWWESPWGKGRPGWHIECSAMSMRFLGPSFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V YW+HNG V N+EKMSKSLGNFFTIR++ E + P LR F++ AHYRS
Sbjct: 241 QSEGANGCQFVKYWLHNGFVNINSEKMSKSLGNFFTIREVLELFDPETLRFFILQAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA----EDCINKLRDE 372
PL+YS L A + IY+ L + AL E TA PA+ + + L
Sbjct: 301 PLDYSDQNLREAQAGLSRIYEALAALDQAL----EKPATAIHLPASAAEFAEKVAGLLPR 356
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F M DD NT+ L G D+++ +N L + + +E LR E+ VL
Sbjct: 357 FREAMDDDFNTAQAL-GTLFDSIRTLNRLL--AEGGGSSSASRADLEQLRAAVTEIGAVL 413
Query: 433 RILGLLP 439
+ + P
Sbjct: 414 GLFRIKP 420
>gi|145351377|ref|XP_001420057.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580290|gb|ABO98350.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 497
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/426 (48%), Positives = 277/426 (65%), Gaps = 19/426 (4%)
Query: 25 MTQQKELFTP--IVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVR 82
MT++KE+FTP KV MYVCGVT YD SH+GHAR V+FD+LYR L L +VTY R
Sbjct: 1 MTRKKEIFTPRDPAGKKVQMYVCGVTVYDYSHIGHARVYVAFDVLYRQLMRLGYDVTYCR 60
Query: 83 NFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMI 142
NFTD+DDKII+R+N+ GE +L++++ + + DMA L CL PT +PR ++ ++ I I
Sbjct: 61 NFTDIDDKIIKRSNESGETCEALTDKFIEAFHEDMAALGCLRPTLEPRATECVDDIIAFI 120
Query: 143 TQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKA 202
++I AY EGDV+F+V+ P YG LSG+ E+NRAGERVAVD RK+NPADFALWK
Sbjct: 121 ERLIAKGNAYETEGDVYFSVDTLPAYGALSGRNQEDNRAGERVAVDGRKKNPADFALWKT 180
Query: 203 AKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAAC 262
AK GEP+W SPWG GRPGWHIECSAM L DIHGGG DL+FPHHENE+AQS AAC
Sbjct: 181 AKPGEPTWTSPWGEGRPGWHIECSAMIEKMLGPTIDIHGGGQDLVFPHHENELAQSSAAC 240
Query: 263 -----QDSN--VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
D N V YW+HNG V ++EKMSKSLGNFFTIR++ ++YHP LR L+ AHYR
Sbjct: 241 GCGAHADENPFVRYWVHNGFVKVDSEKMSKSLGNFFTIREVLDKYHPFVLRFMLLGAHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
+P+NY+ L+ ASD V+Y+YQT+ D L + P D + KL E
Sbjct: 301 APINYTQRALEEASDRVYYLYQTVHDVRAILRDAAAEEPAKKPVPLVADAL-KLASEAEK 359
Query: 376 RMS----DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
++S DD+NT ++ L S+N + ++ + + +L+ + + V+ +
Sbjct: 360 QVSEALNDDMNTPGVIA-----TLSAPLKSMNDFMTTKAGKKAVGRVGALQSLLSTVEGL 414
Query: 432 LRILGL 437
+ +G+
Sbjct: 415 MEAVGM 420
>gi|116749069|ref|YP_845756.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
gi|171460796|sp|A0LIR9.1|SYC_SYNFM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|116698133|gb|ABK17321.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
Length = 493
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/427 (48%), Positives = 271/427 (63%), Gaps = 10/427 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN++T+ KE F P+ GKV YVCGVT YDLSH+GHAR+A+ FD++YRYL L
Sbjct: 1 MVLHVYNTLTKSKEEFIPLEPGKVKFYVCGVTVYDLSHIGHARSAIVFDVIYRYLRFLGF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRNFTDVDDKIIRRAND G + S++ RY + DM L L P +P ++++
Sbjct: 61 EVTYVRNFTDVDDKIIRRANDAGTDCRSIAQRYIAAFYEDMDALGVLRPDLEPLATENVP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ ++I +++ AY DVFF +EK P YG+LSG+++E+ AG RV VD+RKRNP D
Sbjct: 121 GMIEIIRVLMDKGIAYQAGADVFFEIEKFPGYGKLSGRQIEDMLAGARVEVDARKRNPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +K GEPSWDSPWGPGRPGWHIECSAM + +L FDIHGGG DLIFPHHENEIA
Sbjct: 181 FVLWKGSKPGEPSWDSPWGPGRPGWHIECSAMGSRFLGKTFDIHGGGKDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YW+HNG V NNEKMSKSLGNF TIR + ++ HP +R F++S HYRS
Sbjct: 241 QSEAAFGMPFVRYWLHNGFVNINNEKMSKSLGNFLTIRDVLQKVHPETVRFFVLSKHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALS-----PFQEHGKTARINPAAEDCINKLRD 371
P+++S + A + +Y TL + + FQE + +P D I L
Sbjct: 301 PVDFSDETIGEAEKGLERLYGTLGAVKERAAAGVEEAFQEKALRGQ-DPELFDQIAALSG 359
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F M +D NT+ L F + + L+ +KQ K +L R + +++
Sbjct: 360 AFREAMDNDFNTAQALGNLFS-LQRHLQRFLDKFGRKQLKGPASALA---RAGADAIRDH 415
Query: 432 LRILGLL 438
+LGLL
Sbjct: 416 ALVLGLL 422
>gi|220934112|ref|YP_002513011.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|254781696|sp|B8GNT5.1|SYC_THISH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|219995422|gb|ACL72024.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 460
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/393 (51%), Positives = 262/393 (66%), Gaps = 21/393 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+NS+T++KE FTP+ G+V MYVCG+T YD HLGHAR V FD++YRYL+ L +V
Sbjct: 2 LQIHNSLTRRKETFTPMEPGRVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLKALGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY+RN TD+DDKIIRRA + GE+ +L++R+ D L LPP+ +PR ++H++ +
Sbjct: 62 TYIRNITDIDDKIIRRAAENGEDIRALTDRFIAAMHEDAEALGVLPPSAEPRATEHIDGM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++ AY + GDV++AV K YGRLSG+RLE+ RAGERVA D KR+P DF
Sbjct: 122 LAMIGTLVERGYAYAGDNGDVYYAVAKFEPYGRLSGKRLEDLRAGERVAPDEAKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP+WDSPWGPGRPGWHIECSAMS HYL + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTHYLGNHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+YWMHNG V N EKMSKSLGNFFT+R++ RY +R+F++S+HYRSP
Sbjct: 242 SEAATCEHFVNYWMHNGFVRVNEEKMSKSLGNFFTVREVLARYPAEVVRYFILSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD+A + +Y L+ + ++PA + R F A M
Sbjct: 302 LNYSDEPLDAARAGLTRLYTALRGVQA-------------VDPAGQG--EGYRRRFQAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQP 410
DD NT + F I LN L+ + P
Sbjct: 347 DDDFNTPVAMAVLFD-----IARELNRLRDEDP 374
>gi|77165712|ref|YP_344237.1| cysteine--tRNA ligase [Nitrosococcus oceani ATCC 19707]
gi|254433143|ref|ZP_05046651.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
gi|109894913|sp|Q3J8Y9.1|SYC_NITOC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|76884026|gb|ABA58707.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
gi|207089476|gb|EDZ66747.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
Length = 485
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/421 (49%), Positives = 267/421 (63%), Gaps = 17/421 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYNS+T++KE F PI GKV MYVCG+T YDL H+GHAR V FD++ RYL EV
Sbjct: 2 LRIYNSLTRRKEEFIPIESGKVRMYVCGMTVYDLCHVGHARVMVVFDMVVRYLRASGFEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII RAN+ GE+ +L+ RY Q D A LQ LPP +PR ++ ME I
Sbjct: 62 IYVRNITDIDDKIIHRANERGESIHTLTARYIQALHEDEASLQILPPDREPRATESMEAI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ Q+++ AY E GD+++ V YG LSG+ LE+ RAGERV V+ K +P DF
Sbjct: 122 LAMVRQLLDQGYAYQGENGDIYYDVSHFEGYGALSGRHLEDLRAGERVQVNEAKTDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK+GEP+W+SPWGPGRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKSGEPAWESPWGPGRPGWHIECSAMSIQELGTHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+YWMHNG V N+EKMSKSLGNFFT+R++ E YHP LR+F++S+HYRSP
Sbjct: 242 SEAATGGKFVNYWMHNGFVRLNDEKMSKSLGNFFTVREVLEHYHPEVLRYFILSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ QLD+A A+ +Y L+ G + + + + R+ M
Sbjct: 302 LNYTKQQLDTAKAAMTRLYTALRGIPRGEDRASAQGLSWEFTDGGDPFVLRFREA----M 357
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L L + +LN ++ ++ SL LR + ILGL
Sbjct: 358 DDDFNTPEALA-----LLNEVRHALNRAREAGDTEKGQSLAVLLRSLGG-------ILGL 405
Query: 438 L 438
L
Sbjct: 406 L 406
>gi|95929121|ref|ZP_01311866.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
gi|95135022|gb|EAT16676.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
Length = 481
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/424 (47%), Positives = 271/424 (63%), Gaps = 16/424 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L++YN+++ KELF P V GKVGMYVCGVT YD H+GHARA + FD++YRYL++
Sbjct: 1 MSLRVYNTLSGNKELFEPRVPGKVGMYVCGVTVYDYCHIGHARANIVFDIVYRYLKYSDY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN+TDVDDKII RAN+ G LS + Q + DMA L PT QP+ ++H++
Sbjct: 61 DVTYVRNYTDVDDKIINRANERGITSQQLSEEFIQAFDEDMARLGLDLPTVQPKATEHID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I ++ ++I N AY +GDV+FAVE +Y +LS + L+ +AG R+A +KRNP D
Sbjct: 121 HIIALVERLIANGKAYASDGDVYFAVESFDSYLKLSKRNLDEMQAGARIAPGEKKRNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GEPSW+SPWG GRPGWHIECSAM YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKAAKPGEPSWESPWGKGRPGWHIECSAMGMEYLGESFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YW+HNG V N EKMSKSLGNFFTIR I + Y P +R F++SAHYRS
Sbjct: 241 QSEAATGQPFVKYWLHNGFVNVNQEKMSKSLGNFFTIRDILKTYDPEVVRFFILSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN--KLRDEFH 374
P+++S L A + Y+ LQ L A P+ + + +L +F
Sbjct: 301 PIDFSDQNLKEARLGLSRFYEGLQAAAEVL---------AECPPSDVEATDGAELTAKFR 351
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT+ + F+ ++N L + +++ L+ S+R + + E+ ++
Sbjct: 352 EAMDDDFNTAQAIGYLFEGI-----RTMNRLMATKKFRKKADLVASVRSLYDTFLELGKV 406
Query: 435 LGLL 438
LG+
Sbjct: 407 LGMF 410
>gi|374621461|ref|ZP_09693993.1| cysteinyl-tRNA synthetase [Ectothiorhodospira sp. PHS-1]
gi|373940594|gb|EHQ51139.1| cysteinyl-tRNA synthetase [Ectothiorhodospira sp. PHS-1]
Length = 460
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/428 (49%), Positives = 273/428 (63%), Gaps = 31/428 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T++K+ F + GKV MYVCG+T YD HLGHAR V FD++YRYL+ L EV
Sbjct: 2 LHIYNTLTRRKDPFQSMEPGKVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLKALGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + GE+ +L++R+ Q D L P+++PR + H+ I
Sbjct: 62 TYVRNITDIDDKIIRRAAENGESIEALTDRFIQAMHEDADALGVARPSFEPRATAHIHDI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++ AYV + GDV+++V YG+LSG+R+E+ RAGERVA D KR+P DF
Sbjct: 122 LHMIGTLLRRGFAYVGDNGDVYYSVSLFDGYGKLSGKRIEDLRAGERVAPDESKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP+WDSPWGPGRPGWHIECSAMS HYL FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTHYLGHHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+YWMHNG V N EKMSKSLGNFFT+RQ+ Y P +R+F++ +HYRSP
Sbjct: 242 SEAASCEHYVNYWMHNGFVRVNEEKMSKSLGNFFTVRQVLAHYRPEEVRYFILGSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L++A A+ +Y L+ ++P G+ A R F A M
Sbjct: 302 LNYSDEPLNNARAALNRLYTALR----GVAPLPSEGEGA-----------PFRSRFDAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L+ F I +N L+ QP E+ ++ ++E+ +LG+
Sbjct: 347 QDDFNTPVALSVLFD-----IAHEVNRLRDSQP--------EAAGRLAGLLREMGGVLGI 393
Query: 438 LP--PGAY 443
L P AY
Sbjct: 394 LGSDPDAY 401
>gi|322421697|ref|YP_004200920.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
gi|320128084|gb|ADW15644.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
Length = 480
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/421 (48%), Positives = 268/421 (63%), Gaps = 13/421 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L++YN++T KE F PI GKVGMYVCGVT YD H+GHARA V FD++YRYL+
Sbjct: 1 MPLRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRYLQAKGL 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRN+TD+DDKII RAN G +S R+ +E+ DMA L PT+QP+ ++H+
Sbjct: 61 EVTYVRNYTDIDDKIINRANRDGVPYNEISERFIKEFDSDMARLMLRIPTFQPKATEHVP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I ++ ++I+ AY DVF+ V++ Y +LS + LE+ +AG R+ VD +K +P D
Sbjct: 121 EIIALVQKLIDKGFAYQSGSDVFYRVDRFEGYLKLSKRNLEDMQAGARIEVDDKKEHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECSAMS +L DIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKGAKPGEPYWESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YW+HNG V N EKMSKSLGNFFTI+++ ERY LR FL+SAHYRS
Sbjct: 241 QSEAASGKPFVKYWLHNGFVNINAEKMSKSLGNFFTIKEVLERYDAEVLRFFLLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+++S L A + IY+ L + L+ +HG T E C + + F
Sbjct: 301 PIDFSDQNLKEAELGLERIYKALSGIDERLTAGPDHGATEESAELEEKC-SAIATRFIEA 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ L F D ++ IN +L +S +E L++++ EV + LG
Sbjct: 360 MDDDFNTAMALGHIF-DLVRSINRAL-----------PVSPLELLKRVKEEVARIAATLG 407
Query: 437 L 437
+
Sbjct: 408 V 408
>gi|300114660|ref|YP_003761235.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
gi|299540597|gb|ADJ28914.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
Length = 495
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/421 (50%), Positives = 263/421 (62%), Gaps = 17/421 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYNS+T++KE F PI GKV MYVCG+T YDL H+GHAR V FD++ RYL EV
Sbjct: 2 LRIYNSLTRKKEEFIPIESGKVRMYVCGMTVYDLCHVGHARVMVVFDVVARYLRASGFEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII RAN+ GE+ +L+ RY Q D A LQ LPP +PR ++ ME I
Sbjct: 62 MYVRNITDIDDKIIHRANEKGESIHALTARYIQALHEDEASLQILPPDREPRATESMEAI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ Q++ AY E GD+++ V YG LSG+ LE+ RAGERV V+ K +P DF
Sbjct: 122 LAMVRQLLEQGYAYQGENGDIYYDVSHFEGYGALSGKHLEDLRAGERVQVNEAKTDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EP+W+SPWGPGRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPDEPAWESPWGPGRPGWHIECSAMSIQELGVHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+YWMHNG V ++EKMSKSLGNFFT+R++ E YHP LR+F++S+HYRSP
Sbjct: 242 SEAATGSKFVNYWMHNGFVRLDDEKMSKSLGNFFTVREVLEHYHPEVLRYFILSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS QLD+A A+ +Y L+ G + + I + R+ M
Sbjct: 302 LNYSKQQLDTAKAAMTRLYTALRGIPRGDDRASAQGLSWEFVDGEDPFILRFREA----M 357
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L L + +LN +K ++ SL LR + ILGL
Sbjct: 358 DDDFNTPEALA-----LLNEVRHALNRARKGGDTEKGQSLAVLLRALGG-------ILGL 405
Query: 438 L 438
L
Sbjct: 406 L 406
>gi|114320961|ref|YP_742644.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
gi|114227355|gb|ABI57154.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
Length = 485
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/375 (53%), Positives = 245/375 (65%), Gaps = 15/375 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L I+NS+TQ+KE F PI G V MYVCG+T YD HLGHARA V FD++ RYL HL V
Sbjct: 25 LHIHNSLTQRKERFEPIQPGHVRMYVCGMTVYDYCHLGHARALVVFDMVARYLRHLGYRV 84
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKIIRRA +LGE +++ R+ + D L LPP ++PR + H++ I
Sbjct: 85 TFVRNITDIDDKIIRRAAELGEPMGAVTERFIRAMHEDAEALGVLPPDHEPRATGHIDDI 144
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +++ AYV + GDV+FAV P YG+LSG+R E+ RAG RV VD KR+P DF
Sbjct: 145 IAMIERLVERGHAYVADDGDVYFAVSSYPEYGKLSGERQEDLRAGARVEVDEGKRDPVDF 204
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAA+ GEP+W SPWG GRPGWHIECSAMS L FDIHGGG+DL FPHHENEIAQ
Sbjct: 205 ALWKAARPGEPAWPSPWGEGRPGWHIECSAMSTQVLGDHFDIHGGGLDLKFPHHENEIAQ 264
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMHNGHV N+EKM+KSLGNFFT+R++ + A+R FL+S+HYRSP
Sbjct: 265 SECATGHPFVNYWMHNGHVRINDEKMAKSLGNFFTVREVLSEHRAEAVRLFLLSSHYRSP 324
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ L A A+ +Y L+ A P E R FHA M
Sbjct: 325 LNYSLDGLRQAQGALERLYLALRGLPEA--------------PVPEADPQGFRARFHAAM 370
Query: 378 SDDLNTSHILTGAFQ 392
DD NT L F+
Sbjct: 371 DDDFNTPEALAVLFE 385
>gi|392409460|ref|YP_006446067.1| cysteinyl-tRNA synthetase [Desulfomonile tiedjei DSM 6799]
gi|390622596|gb|AFM23803.1| cysteinyl-tRNA synthetase [Desulfomonile tiedjei DSM 6799]
Length = 480
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 279/438 (63%), Gaps = 26/438 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LKI+N+MT++KE F P + GMYVCGVT YD H+GHAR+ V FD+++RYL
Sbjct: 1 MGLKIFNTMTRKKEDFKPRNPNRTGMYVCGVTVYDYCHIGHARSQVLFDIIFRYLMFKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRNFTD+DDKII RAN+L + L+ ++ +E+ VDM L L PT +P+ ++ +
Sbjct: 61 EVTYVRNFTDIDDKIINRANELKIDWKELAEKFVREFYVDMDALGVLRPTREPKATEFIA 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
QI+ +I +++ AY V+GDV F+V P YG+LSG++++ +G RV V+ +K+NP D
Sbjct: 121 QIQALIAKLVEGKYAYTVDGDVMFSVASFPEYGKLSGKKVDELMSGARVDVNEKKKNPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GEPSW+SPWGPGRPGWHIECSAMS YL FDIHGGG DL FPHHENEIA
Sbjct: 181 FALWKAAKPGEPSWESPWGPGRPGWHIECSAMSMFYLGQHFDIHGGGADLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA ++ V+YW+HNG V EKMSKSLGN IR I + HP ALRHFL+++HYRS
Sbjct: 241 QSEAATGETFVNYWVHNGFVNIRAEKMSKSLGNVLNIRDILKTVHPEALRHFLLTSHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+YS + +S A+ +Y + AL E T+ P + + + F
Sbjct: 301 PLDYSDAFVKESSTALERLYAAM----AALDELIEARGTSDDLPQE---LTGIEERFSEA 353
Query: 377 MSDDLNTSHILTGAFQDALKFIN--SSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR- 433
M DD NT L F+ A + IN S N + K E LR++++ + V R
Sbjct: 354 MDDDFNTPRALAILFE-AARTINRISGTNSVPKP----------ELLREVKDRILHVARE 402
Query: 434 ILGLLPPGAYSEVKTAFL 451
+LG+L E +T FL
Sbjct: 403 VLGIL-----REDQTEFL 415
>gi|187631658|sp|Q0A7N3.2|SYC_ALHEH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 462
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/375 (53%), Positives = 245/375 (65%), Gaps = 15/375 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L I+NS+TQ+KE F PI G V MYVCG+T YD HLGHARA V FD++ RYL HL V
Sbjct: 2 LHIHNSLTQRKERFEPIQPGHVRMYVCGMTVYDYCHLGHARALVVFDMVARYLRHLGYRV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKIIRRA +LGE +++ R+ + D L LPP ++PR + H++ I
Sbjct: 62 TFVRNITDIDDKIIRRAAELGEPMGAVTERFIRAMHEDAEALGVLPPDHEPRATGHIDDI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +++ AYV + GDV+FAV P YG+LSG+R E+ RAG RV VD KR+P DF
Sbjct: 122 IAMIERLVERGHAYVADDGDVYFAVSSYPEYGKLSGERQEDLRAGARVEVDEGKRDPVDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAA+ GEP+W SPWG GRPGWHIECSAMS L FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 ALWKAARPGEPAWPSPWGEGRPGWHIECSAMSTQVLGDHFDIHGGGLDLKFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMHNGHV N+EKM+KSLGNFFT+R++ + A+R FL+S+HYRSP
Sbjct: 242 SECATGHPFVNYWMHNGHVRINDEKMAKSLGNFFTVREVLSEHRAEAVRLFLLSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ L A A+ +Y L+ A P E R FHA M
Sbjct: 302 LNYSLDGLRQAQGALERLYLALRGLPEA--------------PVPEADPQGFRARFHAAM 347
Query: 378 SDDLNTSHILTGAFQ 392
DD NT L F+
Sbjct: 348 DDDFNTPEALAVLFE 362
>gi|323703779|ref|ZP_08115417.1| cysteinyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
gi|323531248|gb|EGB21149.1| cysteinyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
Length = 493
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/388 (50%), Positives = 254/388 (65%), Gaps = 5/388 (1%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
++IYN++T+ KE F P +G V MYVCG T Y+ HLG+AR V FD + RY + +
Sbjct: 7 VMEIYNTLTKTKEEFIPRDKGHVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYFLYKGFK 66
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
V YV+NFTDVDDKII RA + G +PL+L+N+Y EY VD L L P+VS+H+++
Sbjct: 67 VKYVQNFTDVDDKIINRAKEEGMDPLALANKYINEYFVDADALNVLRADVHPKVSEHIKE 126
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I D+I + AY V+GDV+FAV P YG+LSG+ LE+ +AG RV VD RK++P DF
Sbjct: 127 IIDLIKLLEQRGHAYAVDGDVYFAVRSFPEYGKLSGRNLEDMQAGARVEVDVRKKDPMDF 186
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSW+SPWGPGRPGWHIECSAM+ YL FDIHGGG DLIFPHHENEIAQ
Sbjct: 187 ALWKAAKPGEPSWESPWGPGRPGWHIECSAMAQKYLGYSFDIHGGGFDLIFPHHENEIAQ 246
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+C YWMHNG +T N EKMSKSLGNFF +R+I +++ P +R FL+S HYRSP
Sbjct: 247 SEASCGKPFARYWMHNGFITINQEKMSKSLGNFFLVREILDKFPPDVVRWFLLSTHYRSP 306
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L++ +L A + I ++ AL GK A + + LR EF M
Sbjct: 307 LDFDDEKLQVAGRGLERIKTAVRLLYEALDRPDSAGKEALDAARFKGKLAALRSEFEQAM 366
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNML 405
DD NT+ ++ F+ ++ +N+L
Sbjct: 367 DDDFNTALAISVFFE-----LSKEINIL 389
>gi|404491639|ref|YP_006715745.1| cysteinyl-tRNA ligase [Pelobacter carbinolicus DSM 2380]
gi|109894916|sp|Q3A8C9.1|SYC_PELCD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|77543801|gb|ABA87363.1| cysteinyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
Length = 481
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/390 (50%), Positives = 256/390 (65%), Gaps = 22/390 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L++YN+MT +KE F P+ GKVGMYVCGVT YD H+GHARA V FD++YRYL+ +
Sbjct: 1 MSLRVYNTMTGRKEEFEPLQPGKVGMYVCGVTVYDYCHIGHARANVVFDIIYRYLQFIGF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN+TDVDDKII+RAN+ G + +L+ + Q + DM L PT QP+ + H++
Sbjct: 61 DVTYVRNYTDVDDKIIKRANERGISSDTLAGEFIQAFDEDMNRLGLAEPTIQPKATCHID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I +++ ++I+ AY +GDV+F+VE P+Y +LS + ++ R+G R+ +KRNP D
Sbjct: 121 HIVNLVQRLIDRGIAYESQGDVYFSVEDFPSYLKLSKRNMDEMRSGARITPGEQKRNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GEPSW+SPWGPGRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKAAKPGEPSWESPWGPGRPGWHIECSAMSMEYLGESFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V YW+HNG V N EKMSKSLGNFFTIR I + Y P LR F+++AHYRS
Sbjct: 241 QSEGATGKPFVKYWLHNGFVNVNQEKMSKSLGNFFTIRDILQTYDPEVLRFFILTAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA-------EDCINKL 369
P+++S Q LQD + LS F E A AA + L
Sbjct: 301 PIDFSD--------------QNLQDARLGLSRFYEGLHAASEVLAACPPGDVTSEAGATL 346
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFIN 399
+ F M DD NT+ + G DA++ IN
Sbjct: 347 ENVFREAMDDDFNTAAAI-GHLFDAVRTIN 375
>gi|333922423|ref|YP_004496003.1| cysteinyl-tRNA synthetase [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333747984|gb|AEF93091.1| cysteinyl-tRNA synthetase [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 486
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/387 (50%), Positives = 254/387 (65%), Gaps = 5/387 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T+ KE F P +G V MYVCG T Y+ HLG+AR V FD + RY + +V
Sbjct: 1 MEIYNTLTKTKEEFIPRDKGHVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYFLYKGFKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTDVDDKII RA + G +PL+L+N+Y EY VD L L P+VS+H+++I
Sbjct: 61 KYVQNFTDVDDKIINRAKEEGMDPLALANKYINEYFVDADALNVLRADVHPKVSEHIKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I + AY V+GDV+FAV P YG+LSG+ LE+ +AG RV VD RK++P DFA
Sbjct: 121 IDLIKLLEQRGHAYAVDGDVYFAVRSFPEYGKLSGRDLEDMQAGARVEVDVRKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEPSW+SPWGPGRPGWHIECSAM+ YL FDIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKAAKPGEPSWESPWGPGRPGWHIECSAMAQKYLGYSFDIHGGGFDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A+C YWMHNG +T N EKMSKSLGNFF +R+I +++ P +R FL+S HYRSPL
Sbjct: 241 EASCGKPFARYWMHNGFITINQEKMSKSLGNFFLVREILDKFPPDVVRWFLLSTHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++ +L A + I ++ AL GK A + + LR EF M
Sbjct: 301 DFDDEKLQVAGRGLERIKTAVRLLYEALDRPDSAGKEALDAARFKGKLAALRSEFEQAMD 360
Query: 379 DDLNTSHILTGAFQDALKFINSSLNML 405
DD NT+ ++ F+ ++ +N+L
Sbjct: 361 DDFNTALAISVFFE-----LSKEINIL 382
>gi|404494911|ref|YP_006719017.1| cysteinyl-tRNA ligase [Geobacter metallireducens GS-15]
gi|418067565|ref|ZP_12704904.1| cysteinyl-tRNA synthetase [Geobacter metallireducens RCH3]
gi|109894903|sp|Q39ZL8.1|SYC_GEOMG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|78192539|gb|ABB30306.1| cysteinyl-tRNA synthetase [Geobacter metallireducens GS-15]
gi|373558563|gb|EHP84899.1| cysteinyl-tRNA synthetase [Geobacter metallireducens RCH3]
Length = 485
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/431 (46%), Positives = 273/431 (63%), Gaps = 10/431 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L++YN+++ KE FTP+V G+V MYVCGVT YD H+GHARA V FD++YRYL H
Sbjct: 1 MSLRVYNTLSGTKEEFTPLVPGRVSMYVCGVTVYDHCHIGHARANVVFDMIYRYLRHAGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN+TDVDDKII RAN G ++S R+ E+ DMA L PT+QP+ ++H+
Sbjct: 61 DVTYVRNYTDVDDKIINRANQEGVPYNAISERFIAEFDRDMAALGLDLPTHQPKATEHIA 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ D+I+++I AY +GDV+F VEK Y +LS + L+ +AG R+ V +KR+P D
Sbjct: 121 EMIDVISRLIEKGFAYAADGDVYFCVEKFDPYLKLSKRNLDEMQAGARIEVGEKKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK +K GEP W+SPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKGSKPGEPFWESPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA YW+HNG V N+EKMSKSLGNFFTI+++ E+Y LR FL+SAHYRS
Sbjct: 241 QSEAANGKPFAHYWIHNGFVNINSEKMSKSLGNFFTIKEVLEKYDAEVLRFFLLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+++S L A + IY TL + L+ E AE + + F
Sbjct: 301 PIDFSDQNLREAEAGLERIYGTLAGIDENLTKGAEGTAEETDRELAEKAVT-FPERFREA 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ L F + S+ +L + + +L+ R + +++V +LG
Sbjct: 360 MDDDFNTAQALGFVFD----LVRSANRVLGEGKGGGSNRALLAEAR---DRIRKVGAVLG 412
Query: 437 LLP--PGAYSE 445
+ P A++E
Sbjct: 413 IFTSEPRAFAE 423
>gi|303290903|ref|XP_003064738.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453764|gb|EEH51072.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 479
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/428 (48%), Positives = 271/428 (63%), Gaps = 43/428 (10%)
Query: 25 MTQQKELFTP--IVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVR 82
MT++KE F P KV MYVCGVT YD SH+GHAR V+FD+LYR L L +VTYVR
Sbjct: 1 MTRKKEPFAPNDPDDKKVSMYVCGVTVYDYSHIGHARVYVAFDVLYRTLTRLGYDVTYVR 60
Query: 83 NFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMI 142
NFTDVDDKII+RAN+ GE +L R+ + DM+ L CLPPT +PR + H++ I +
Sbjct: 61 NFTDVDDKIIKRANENGEECDALVERFIAAFHEDMSSLGCLPPTMEPRATRHVDDILRVT 120
Query: 143 TQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWK 201
++ AY EG DV+F+V+ P YG+LSG++LE+NRAGERVA+D RK+NPADFALWK
Sbjct: 121 EALVEKGHAYPAEGGDVYFSVDSLPTYGKLSGRKLEDNRAGERVAIDERKKNPADFALWK 180
Query: 202 AAKAGEPSWDSPWGPGRPGWHIECSAM-SAHYLSSKFDIHGGGIDLIFPHHENEIAQS-- 258
A+K GEPSW SPWG GRPGWHIECSAM A + DIHGGG DL+FPHHENE+AQS
Sbjct: 181 ASKPGEPSWASPWGEGRPGWHIECSAMIDATFGGKSIDIHGGGQDLVFPHHENELAQSTA 240
Query: 259 -CAACQDSN--------VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFL 309
C C D+ V YW+HNG V ++EKMSKSLGNFFTIR++T +Y ALR L
Sbjct: 241 FCGCCDDAKDAKDAPPFVKYWVHNGFVKVDSEKMSKSLGNFFTIREVTAKYDATALRWML 300
Query: 310 ISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL 369
+ HYR+ +NY+ L+ ASD ++Y+YQTL + + +TA
Sbjct: 301 LGTHYRAAINYTQRALEEASDRLYYLYQTLSEA-------SDETETA------------- 340
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
A +SDDLNT + + LK +N ++ K K+ + + I +++ + V
Sbjct: 341 ---VGAALSDDLNTP-LAIASLSSPLKLLNDFVSTKKGKKAQGR----IAAMKALVRAVT 392
Query: 430 EVLRILGL 437
E L +GL
Sbjct: 393 ETLDAVGL 400
>gi|335043568|ref|ZP_08536595.1| cysteinyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
gi|333790182|gb|EGL56064.1| cysteinyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
Length = 463
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/384 (51%), Positives = 261/384 (67%), Gaps = 15/384 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE+F P+ GKV MYVCG+T YDL H+GHAR V FD++ RYL L +V
Sbjct: 2 LKIYNSLTRQKEVFKPLQEGKVNMYVCGMTVYDLCHVGHARVMVVFDVVTRYLRALGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + GE+ +L+ RY E D L L P +P+ ++ M +I
Sbjct: 62 TYVRNITDIDDKIIKRAAENGESIQALTERYIDEMHKDADALGVLRPDIEPKATESMTEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I+ AY + GDV++ V + YG+LSG+ +E+ RAGER+AV+ K +P DF
Sbjct: 122 LAMIETLISKGLAYKADNGDVYYDVSQFNGYGKLSGRNIEDLRAGERIAVNEAKTDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAKAGEP+W+SPWG GRPGWHIECSAMSAH L +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKAGEPAWESPWGEGRPGWHIECSAMSAHCLGEQFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A +V+YWMHNG V ++EKMSKSLGNFFT+R++ E+Y A+R+F++S+HYRSP
Sbjct: 242 SEGAHGCQSVNYWMHNGFVRIDDEKMSKSLGNFFTVREVLEQYPAEAIRYFILSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ QL+ A A+ Y TL++ + T ++N ++ + F A M
Sbjct: 302 LNYAEDQLEQAKAALTRFYTTLREVDT----------TQKVNWQDDE---EFGGRFKAAM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSS 401
DD NT+ L+ D + IN +
Sbjct: 349 DDDFNTALALS-VMADVRQAINKA 371
>gi|345876724|ref|ZP_08828488.1| cobyrinic acid a,c-diamide synthase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344226223|gb|EGV52562.1| cobyrinic acid a,c-diamide synthase [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 482
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/391 (50%), Positives = 255/391 (65%), Gaps = 18/391 (4%)
Query: 10 VAAPKMDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYR 69
AA + LKIYN + +KE F P+ G+V MYVCG+T YDL HLGHAR V FD++YR
Sbjct: 14 TAADVVHTMLKIYNDLNNRKEEFKPLEEGRVRMYVCGMTVYDLCHLGHARVMVVFDVVYR 73
Query: 70 YLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQP 129
YL+ + EVTY+RN TD+DDKII RAN+ GE ++L+ R+ Q D L LPP +P
Sbjct: 74 YLKAMGYEVTYIRNITDIDDKIINRANENGEPFMALTERFIQAMHEDATALGVLPPDDEP 133
Query: 130 RVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 188
R + HM++I MI ++I+N AY VE GDV++ V P+YG+LSG+ +++ +G RV VD
Sbjct: 134 RATGHMKEILVMIQRLIDNGHAYAVENGDVYYDVRSFPDYGKLSGKSIDDLESGARVEVD 193
Query: 189 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 248
KR+P DFALWK+AK GEP+WDSPWG GRPGWHIECSAMS L FDIHGGG DL F
Sbjct: 194 EIKRDPLDFALWKSAKPGEPAWDSPWGQGRPGWHIECSAMSTCALGDSFDIHGGGADLTF 253
Query: 249 PHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHF 308
PHHENEIAQS A S V YWMHNG V N+EKMSKSLGNFFT+R+I +RY +R+F
Sbjct: 254 PHHENEIAQSEGATGHSFVKYWMHNGFVRINDEKMSKSLGNFFTVREILQRYRAEEVRYF 313
Query: 309 LISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK 368
++++ YRSPLNY L++A A+ Y L+ + + PA +
Sbjct: 314 ILTSQYRSPLNYDEEHLENARAALTRFYTALRGLD-------------EVEPAGGEA--- 357
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFIN 399
+ FHA M DD NT L F D ++ IN
Sbjct: 358 FIERFHAVMDDDFNTPEALAVLF-DMVREIN 387
>gi|85858183|ref|YP_460385.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
gi|85721274|gb|ABC76217.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
Length = 550
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/432 (46%), Positives = 276/432 (63%), Gaps = 19/432 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++LK+YN++ +KE+FTPI G+VG+YVCG+T YD+ H+GHAR+AV FD+L RYLE+
Sbjct: 57 MSLKLYNTLNNKKEVFTPIREGRVGLYVCGITVYDVCHVGHARSAVVFDVLKRYLEYRGY 116
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTY++NFTDVDDKII RAN G + ++NRY + DM L L PT PR ++H+
Sbjct: 117 EVTYIKNFTDVDDKIIARANAEGVSISEIANRYIASHDKDMDRLGVLRPTVTPRATEHIG 176
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ ++I+++ AY V+G+V++AVE+ P YG+LSG++LE+ AG R+ V+ K NP D
Sbjct: 177 EMIELISKLQKRGLAYAVDGNVYYAVERFPGYGKLSGRKLEDMMAGARIDVNEHKNNPMD 236
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA+K EP+WDSPWGPGRPGWHIECS MS YL FDIHGGG DL+FPHHENEIA
Sbjct: 237 FALWKASKPNEPAWDSPWGPGRPGWHIECSVMSQKYLGDTFDIHGGGEDLVFPHHENEIA 296
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS + W+HNG V N+EKMSKSLGN FTI+++ RYH +R F++ +HYRS
Sbjct: 297 QSEGVTGKPLANIWIHNGFVKINSEKMSKSLGNVFTIQEMLTRYHAEVIRLFMLQSHYRS 356
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH----------GKTARINPAAEDCI 366
+++S L A + Y TL+ + L+ +E GKTA + +
Sbjct: 357 AVDFSEESLSEARQGMDRFYGTLKAIQEVLAVAEEEASPISPETLTGKTAELYAH----V 412
Query: 367 NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 426
L D F M DDLNT+ + G DA + IN + K + K+ L + + I
Sbjct: 413 QGLPDRFVEAMDDDLNTARAI-GYLFDAARQINGFIRDAKMAKSKEGWKVLALAGKSI-- 469
Query: 427 EVKEVLRILGLL 438
K++ +LGL
Sbjct: 470 --KDLGYVLGLF 479
>gi|345862869|ref|ZP_08815083.1| cysteine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345126211|gb|EGW56077.1| cysteine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 461
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/382 (51%), Positives = 252/382 (65%), Gaps = 18/382 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN + +KE F P+ G+V MYVCG+T YDL HLGHAR V FD++YRYL+ + EV
Sbjct: 2 LKIYNDLNNRKEEFKPLEEGRVRMYVCGMTVYDLCHLGHARVMVVFDVVYRYLKAMGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY+RN TD+DDKII RAN+ GE ++L+ R+ Q D L LPP +PR + HM++I
Sbjct: 62 TYIRNITDIDDKIINRANENGEPFMALTERFIQAMHEDATALGVLPPDDEPRATGHMKEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I+N AY VE GDV++ V P+YG+LSG+ +++ +G RV VD KR+P DF
Sbjct: 122 LVMIQRLIDNGHAYAVENGDVYYDVRSFPDYGKLSGKSIDDLESGARVEVDEIKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK GEP+WDSPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 ALWKSAKPGEPAWDSPWGQGRPGWHIECSAMSTCALGDSFDIHGGGADLTFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A S V YWMHNG V N+EKMSKSLGNFFT+R+I +RY +R+F++++ YRSP
Sbjct: 242 SEGATGHSFVKYWMHNGFVRINDEKMSKSLGNFFTVREILQRYRAEEVRYFILTSQYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY L++A A+ Y L+ + + PA + + FHA M
Sbjct: 302 LNYDEEHLENARAALTRFYTALRGLD-------------EVEPAGGEA---FIERFHAVM 345
Query: 378 SDDLNTSHILTGAFQDALKFIN 399
DD NT L F D ++ IN
Sbjct: 346 DDDFNTPEALAVLF-DMVREIN 366
>gi|53805250|ref|YP_113028.1| cysteinyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
gi|61216155|sp|Q60BG8.1|SYC_METCA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|53759011|gb|AAU93302.1| cysteinyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
Length = 465
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/382 (53%), Positives = 247/382 (64%), Gaps = 13/382 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F P+ +V MYVCG+T YD HLGHAR V FD++ RYL HL +V
Sbjct: 2 LKIYNSLTRQKEEFRPLEPRRVRMYVCGMTVYDYCHLGHARVMVVFDMVARYLRHLGLKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + GE +L+ R+ + D L LPP ++PR ++ ++ I
Sbjct: 62 TYVRNVTDIDDKIIRRAVENGETIGALTARFIEAMHEDERALGVLPPDHEPRATESIDDI 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I AYV GDVF+AV PNYGRLSG+ L+ RAGER+ VD KR+P DF
Sbjct: 122 LAMIGTLIERGHAYVGSNGDVFYAVASFPNYGRLSGKNLDELRAGERIEVDEAKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK+AK GEP W SPWGPGRPGWHIECSAMS L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKSAKPGEPFWASPWGPGRPGWHIECSAMSTRCLGAHFDIHGGGMDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMHNG V N EKMSKSLGNFFT+R+I RY P +R F++++HYRSP
Sbjct: 242 SEGATGEHFVNYWMHNGFVRINEEKMSKSLGNFFTVREILARYRPEVVRFFILNSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A+ A+ +Y L+ L P P ED F M
Sbjct: 302 LNYSDENLDEAAAALSRLYTALRGLAPDL-PL----------PLGEDRDEGFSSRFADAM 350
Query: 378 SDDLNTSHILTGAFQDALKFIN 399
DD NT + F D + IN
Sbjct: 351 QDDFNTPEAIAVLF-DLAREIN 371
>gi|51246780|ref|YP_066664.1| cysteinyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
gi|61216190|sp|Q6AJ23.1|SYC_DESPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|50877817|emb|CAG37657.1| probable cysteinyl-tRNA synthetase [Desulfotalea psychrophila
LSv54]
Length = 489
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/427 (44%), Positives = 279/427 (65%), Gaps = 17/427 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +++YN+++ +KE PI V +YVCG+T+YD H+GHAR+A++FD++ RYL +L
Sbjct: 1 MDIRVYNTLSGKKEPLQPIEPNHVKLYVCGITSYDYCHIGHARSALAFDMIVRYLRYLDY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+VRNFTD+DDKII RAN+ G +L+ R+ E+ DM +L L P +P+ ++H++
Sbjct: 61 KVTFVRNFTDIDDKIIARANETGVTAQALAERFIDEFHTDMDNLGTLRPDIEPKATEHIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ D+I ++++ D AY GDV++ V P YG+LSG+ +E+ +AG R++++ +KRNP D
Sbjct: 121 EMIDIIQELVDKDMAYPSAGDVYYVVNSFPEYGKLSGRNIEDMQAGARISINEQKRNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA+K GEPSW+SPWGPGRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKASKPGEPSWESPWGPGRPGWHIECSAMSRKYLGENFDIHGGGKDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + W+H+G VT +EKMSKSLGNF TI+ I + YHP LR F+ S YR+
Sbjct: 241 QSEGANGKPFANTWIHHGFVTIKDEKMSKSLGNFLTIKDILDHYHPEILRAFIFSTQYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPA---AEDC--INKLRD 371
PL++S + + A A+ +Y+ L D Q+ K PA A+D +N +
Sbjct: 301 PLDFSEIAMQDAETALVRLYECLHD-------IQQLAKGDPTLPALISAKDAAKLNSIET 353
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F M++D NT+ L G DA+K IN + L P + +++ + ++++
Sbjct: 354 RFQEAMNNDFNTALAL-GVLYDAIKIINRAQRALTDT-PSALDVKMLKGSMTL---IQKL 408
Query: 432 LRILGLL 438
I+GLL
Sbjct: 409 AGIVGLL 415
>gi|431929783|ref|YP_007242829.1| cysteinyl-tRNA synthetase [Thioflavicoccus mobilis 8321]
gi|431828086|gb|AGA89199.1| cysteinyl-tRNA synthetase [Thioflavicoccus mobilis 8321]
Length = 465
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/375 (51%), Positives = 245/375 (65%), Gaps = 17/375 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYNS+T+QK +FTP+V G+V MYVCG+T YD HLGHAR V FD++YRYL HL EV
Sbjct: 2 LQIYNSLTRQKAVFTPLVPGQVRMYVCGMTVYDYCHLGHARVMVVFDVVYRYLRHLGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY+RN TD+DDKIIRRA + E +L+ R+ D A L LPP+ +PR + H+++I
Sbjct: 62 TYIRNITDIDDKIIRRAGENDEPIAALTERFIAAMHEDAAALGVLPPSDEPRATAHIDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ M+ ++ AY + GDV++AV + P YG+LSG+ + RAG RV + KR+P DF
Sbjct: 122 QAMVATLLERGLAYRADNGDVYYAVGRFPGYGKLSGKDPQELRAGSRVEIGEAKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP+W+SPWGPGRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWESPWGPGRPGWHIECSAMSTCALGAHFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V WMHNG V N+EKMSKSLGNFFT+R+I RY P +R+F++++HYRSP
Sbjct: 242 SEGATGEPFVEVWMHNGFVRVNDEKMSKSLGNFFTVREILARYRPEEVRYFILTSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY L A A+ Y L+ L P + G A + FHA M
Sbjct: 302 LNYDEDHLQQARGALTRFYTALR----GLPPAEPAGGEA------------FSERFHAAM 345
Query: 378 SDDLNTSHILTGAFQ 392
DD T L F+
Sbjct: 346 DDDFATPEALAVLFE 360
>gi|341581496|ref|YP_004761988.1| cysteinyl-tRNA synthetase [Thermococcus sp. 4557]
gi|340809154|gb|AEK72311.1| cysteinyl-tRNA synthetase [Thermococcus sp. 4557]
Length = 476
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/399 (47%), Positives = 256/399 (64%), Gaps = 3/399 (0%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +++YN++T+QKE F P+ G+V MYVCG T YD +HLGHAR V+FD++ RYLEH
Sbjct: 1 MAIRVYNTLTKQKEEFRPLRDGEVRMYVCGPTVYDYTHLGHARTYVAFDVIRRYLEHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V V NFTD+DDKIIRRAN+ GE+P L+ R+ + +L DM L+ P PRV++HM+
Sbjct: 61 SVLMVMNFTDIDDKIIRRANETGEDPKELAERFLRLFLEDMEALKVKPADVYPRVTEHMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + + ++ AY V+F V++ +YG+LSG +LE R G RV K+NP D
Sbjct: 121 DIIEFVRKLQEKGYAYEGSDGVYFEVQRFKDYGKLSGIKLEELRKGARVEPGEGKKNPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECS MS YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKKAKPGEPKWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ A V YW+H G + N EKMSKSLGNF TIR++ ERY+P +R F++ HYRS
Sbjct: 241 QTEACTGHEWVHYWLHTGFLMVNGEKMSKSLGNFVTIREMLERYNPEVIRLFILQRHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+Y+ ++ A + + +Y TL++ VA+ K A + I R++FH
Sbjct: 301 PLDYTEEGMEHAKNNLERLYNTLENIRVAMERADIAFKWGPEEFEAYEAIRNAREKFHEA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 415
M DD NT+ L F+ A +N L +++K PK+ L
Sbjct: 361 MDDDFNTAEALKAVFE-ASNAVNRYLTVVEK--PKESIL 396
>gi|297568576|ref|YP_003689920.1| cysteinyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
gi|296924491|gb|ADH85301.1| cysteinyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
Length = 494
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/428 (46%), Positives = 266/428 (62%), Gaps = 18/428 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ + I+N+ T +KE P+ G V MYVCG+TAYD H+GHAR+ + FD++YRYL+H
Sbjct: 1 MPILIHNTKTARKEKLAPLEEGHVKMYVCGITAYDYCHIGHARSVLVFDMIYRYLQHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
VT+VRNFTD+DDKII+RA + G LS R+ ++ DM L LPPT +P ++H+
Sbjct: 61 RVTFVRNFTDIDDKIIKRAQEQGTTCTELSQRFIAKFHEDMTALNTLPPTLEPLATEHLP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ MI +++ D AY +GDV++ V++ YG LSG+ LE+ +AG RVAV+ K +P D
Sbjct: 121 EMIAMIEELVAKDLAYEAQGDVYYRVQRFAGYGVLSGRGLEDMQAGARVAVNDNKEHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKA+K GEP+WDSPWGPGRPGWHIECSAM YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FVLWKASKPGEPAWDSPWGPGRPGWHIECSAMGKKYLGETFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A S + W+H+G VT +EKMSKSLGNF TIR++ ER+ ALR F+ S HYR+
Sbjct: 241 QSEGASGKSFANLWVHHGFVTIKDEKMSKSLGNFLTIREVLERHPAEALRLFVFSTHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA-------EDCINKL 369
PL+YS L A A+ IY L + Q G +P+A D + KL
Sbjct: 301 PLDYSETALQDAEAALTRIYSALA------ATAQLPGAAGDPSPSASVVGEKDRDKLAKL 354
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
FH M D N++ L F DA+K IN L P Q L L L++ ++
Sbjct: 355 EQSFHQAMDIDFNSALALGRIF-DAIKIINKVRQALPAN-PAPQDLQL---LQQTAATIR 409
Query: 430 EVLRILGL 437
++ + GL
Sbjct: 410 DLTAVFGL 417
>gi|343172442|gb|AEL98925.1| cysteinyl-tRNA synthetase, partial [Silene latifolia]
Length = 411
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/340 (61%), Positives = 261/340 (76%), Gaps = 7/340 (2%)
Query: 112 EYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGR 170
E+L DM DLQCLPP++QP VSDH+++I +MI ++IN D AY ++ GDV+F+V+K YG
Sbjct: 1 EFLKDMDDLQCLPPSHQPCVSDHIKEIIEMIEELINKDSAYSLDDGDVYFSVDKFERYGL 60
Query: 171 LSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSA 230
LS ++LE+NRAGERV+VD RKRNPADFALWK+AK GE SW SPWG GRPGWHIECSAMSA
Sbjct: 61 LSNRKLEDNRAGERVSVDHRKRNPADFALWKSAKPGEISWPSPWGNGRPGWHIECSAMSA 120
Query: 231 HYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNF 290
YL+ FDIHGGGIDLIFPHHENE+AQSCAAC ++NV YW+HNG V N EKMSKS GN+
Sbjct: 121 KYLTYAFDIHGGGIDLIFPHHENELAQSCAACNEANVGYWVHNGFVNINGEKMSKSTGNY 180
Query: 291 FTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ 350
FTIRQ+T+RYHPLA+R+FL+S +Y SP+N+S+ Q D ASDA++ IYQTL DC AL PFQ
Sbjct: 181 FTIRQVTDRYHPLAVRYFLLSMNYGSPVNFSLYQTDLASDAIYRIYQTLLDCSDALKPFQ 240
Query: 351 ----EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK 406
E+ K + P +L RMSDDL+ + IL G+ Q+ALK IN LN LK
Sbjct: 241 ENVNENAKASSKKP-VNLLTLRLLMILRKRMSDDLHIADILKGSLQEALKSINIELNGLK 299
Query: 407 KKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 446
KKQ +Q+ L+ ++SL ++E E++ VL +LGLL P YSEV
Sbjct: 300 KKQKQQKLLA-VQSLTELEAEIRYVLEVLGLLSPAPYSEV 338
>gi|222053657|ref|YP_002536019.1| cysteinyl-tRNA synthetase [Geobacter daltonii FRC-32]
gi|254781681|sp|B9LZV4.1|SYC_GEOSF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|221562946|gb|ACM18918.1| cysteinyl-tRNA synthetase [Geobacter daltonii FRC-32]
Length = 494
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/440 (47%), Positives = 277/440 (62%), Gaps = 19/440 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L++YN+++ KE F P+ GKV MYVCGVT YD H+GHARA V FD++YRY HL
Sbjct: 1 MGLRVYNTLSGNKEEFVPVEPGKVKMYVCGVTVYDHCHIGHARANVVFDVIYRYFCHLGL 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN+TD+DDKII RAN G +S R+ +E+ DM L PT QP+ ++H++
Sbjct: 61 DVTYVRNYTDIDDKIINRANREGVTYDLISERFIKEFDRDMERLGLKLPTCQPKATEHID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I ++ +I+ D AY GDV F VEK +Y +LSG+ LE+ +AG R+ VD RKR+P D
Sbjct: 121 EIISLVQTLIDKDFAYQAGGDVNFCVEKFDSYLKLSGRTLEDMQAGARIEVDERKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECSAMS YL + FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKEAKPGEPFWESPWGKGRPGWHIECSAMSMKYLGTTFDIHGGGKDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V+YW+HNG V N+EKMSKSLGNFFTI+++ +RY LR FL+SAHYRS
Sbjct: 241 QSEAATGKPFVNYWLHNGFVNINSEKMSKSLGNFFTIKEVLDRYDNEVLRFFLLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT------ARINPAAEDCINK-- 368
P+++S L A + IY+ L E L+ +G T + +N A + +K
Sbjct: 301 PIDFSDQNLTEAEAGLERIYKALAAVEETLAA--GNGCTGAPVDASSLNEAEGELFDKTT 358
Query: 369 -LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENE 427
+ F M DD NT+ + F D ++ +N L+ L + I+ E
Sbjct: 359 SISARFGEAMDDDFNTALAMAHVF-DLVRCVNRVLSETAGASDNICSLCTL-----IKAE 412
Query: 428 VKEVLRILGLLP--PGAYSE 445
V ++ +LG+ P ++ E
Sbjct: 413 VAKIAGVLGIFSSKPASFLE 432
>gi|343172444|gb|AEL98926.1| cysteinyl-tRNA synthetase, partial [Silene latifolia]
Length = 411
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/340 (61%), Positives = 260/340 (76%), Gaps = 7/340 (2%)
Query: 112 EYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGR 170
E+L DM DLQCLPP++QP VSDH+ +I +MI ++I D AY ++ GDV+F+V+K YG
Sbjct: 1 EFLKDMDDLQCLPPSHQPCVSDHIREIIEMIEELIKKDSAYSLDDGDVYFSVDKFERYGL 60
Query: 171 LSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSA 230
LS ++LE+NRAGERV+VD RKRNPADFALWK+AK GE SW SPWG GRPGWHIECSAMSA
Sbjct: 61 LSNRKLEDNRAGERVSVDHRKRNPADFALWKSAKPGEISWPSPWGNGRPGWHIECSAMSA 120
Query: 231 HYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNF 290
YL+ FDIHGGGIDLIFPHHENE+AQSCAAC ++NV YW+HNG V N EKMSKS GN+
Sbjct: 121 KYLTYSFDIHGGGIDLIFPHHENELAQSCAACNEANVGYWVHNGFVNINGEKMSKSTGNY 180
Query: 291 FTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ 350
FTIRQ+T+RYHPLA+R+FL+S +Y SP+N+S+ Q D ASDAV+ IYQTL DC AL PFQ
Sbjct: 181 FTIRQVTDRYHPLAVRYFLLSMNYGSPVNFSLYQTDLASDAVYRIYQTLLDCSDALKPFQ 240
Query: 351 ----EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK 406
E+ K + P +L RMSDDL+ + IL G+ Q+ALK IN+ LN LK
Sbjct: 241 ENVNENAKASSKKP-VNLLTLRLLMILRKRMSDDLHIADILKGSLQEALKSINNELNGLK 299
Query: 407 KKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 446
KKQ +Q+ L+ ++SL ++E E++ VL +LGLL P YSEV
Sbjct: 300 KKQKQQKLLA-VQSLTELEAEIRYVLEVLGLLSPAPYSEV 338
>gi|292491058|ref|YP_003526497.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
gi|291579653|gb|ADE14110.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
Length = 484
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/396 (50%), Positives = 252/396 (63%), Gaps = 10/396 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYNS+T++KE F PI GKV MYVCG+T YDL H+GHAR V FD++ RYL EV
Sbjct: 2 LRIYNSLTRRKEEFVPIEPGKVRMYVCGMTVYDLCHVGHARVMVVFDVVARYLRASGFEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA++ GEN L+ RY + D LQ LPP +PR ++ ME I
Sbjct: 62 TYVRNITDIDDKIIRRAHERGENIQELTARYIEALHEDAEGLQILPPDREPRATESMEAI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ +++ AY E GD+++ V YG LSG++L+ RAGERV V K +P DF
Sbjct: 122 IAMVQRLLEQGYAYQGENGDIYYDVSHFEGYGALSGKQLDELRAGERVQVSEAKTDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EP+WDSPWGPGRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPNEPAWDSPWGPGRPGWHIECSAMSTQALGPHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+YWMHNG V ++EKMSKSLGNFFT+R++ E YHP LR+F++S+HYRSP
Sbjct: 242 SEAATGCKFVNYWMHNGFVRVDDEKMSKSLGNFFTVREVLEHYHPEVLRYFILSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ QL++A AV +Y L+ G + + + + F M
Sbjct: 302 LNYTEQQLETAQAAVTRLYTALRGMPGEGISISAQGSAQELAEGDDPFVQR----FCEAM 357
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 413
DD NT L L I +LN +++ K +
Sbjct: 358 DDDFNTPEALA-----LLNEIRHALNRAREEGDKDK 388
>gi|167629446|ref|YP_001679945.1| cysteinyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
gi|229558718|sp|B0TC35.1|SYC_HELMI RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|167592186|gb|ABZ83934.1| cysteinyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
Length = 481
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/427 (46%), Positives = 276/427 (64%), Gaps = 15/427 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L++YN+++++KE F P G+VGMYVCG T YD HLG+AR V FD + RYLEH+
Sbjct: 1 MSLRVYNTLSREKETFVPHKAGRVGMYVCGPTTYDYIHLGNARPLVVFDTIRRYLEHVGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV Y++NFTD+DDKII RA ++GE+P++++ R+ +EY D L P T P+VS HM
Sbjct: 61 EVVYIQNFTDIDDKIIHRAKEIGEDPIAMAARFVEEYYRDAKALNVRPATIHPKVSAHMA 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I MI ++ AY + GDV+F++ +YG+LSG+ LE+ +AG RV V+ RKR+P D
Sbjct: 121 EIIAMIGVLVEKGHAYELGGDVYFSIPSFKDYGKLSGRSLEDLQAGARVDVNERKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEPSWDSPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKGAKPGEPSWDSPWGKGRPGWHIECSAMSRKYLGDAFDIHGGGQDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
QS A S ++ YW+HNG +T N EKMSKSLGNFFT+R+I +R+ +R +L+S HYR
Sbjct: 241 QSEACTGTSPMARYWLHNGFITVNQEKMSKSLGNFFTLREILKRFPGDVIRFYLLSTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA-----EDCINKLR 370
SP+++ +L++A + + + + E AL+ GK PA E+ +
Sbjct: 301 SPIDFDDSKLEAAQKGLQRLRTSRRLIEEALAA---SGKEGAERPAGQREKLEEQWLAAK 357
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKE 430
F M DD NT+ L+ F D + N+ L+ P+ +QL L ++ +E
Sbjct: 358 KGFREAMDDDFNTALALSMLF-DLAREANTFLHGGFALTPEDRQLLL-----QVAETFEE 411
Query: 431 VLRILGL 437
+ +LG+
Sbjct: 412 LAGVLGI 418
>gi|134298071|ref|YP_001111567.1| cysteinyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
gi|187629810|sp|A4J0Y9.1|SYC_DESRM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|134050771|gb|ABO48742.1| cysteinyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
Length = 486
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/420 (47%), Positives = 268/420 (63%), Gaps = 5/420 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++ + KE F P +G V MYVCG T Y+ HLG+AR V FD + RY + +V
Sbjct: 1 MQIYNTLARAKEEFIPRDKGHVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYFLYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTDVDDKII RA + +PL L+ +Y QE+ VD L + P+VS+H+E+I
Sbjct: 61 DYVQNFTDVDDKIINRAAEEKIDPLELAQKYIQEFFVDADALNVMRADTHPKVSEHIEEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I ++ + AYVV+GDV+FAV YG+LSG+ LE+ +AG RV VD RK++P DFA
Sbjct: 121 IDLIKRLEDQGHAYVVDGDVYFAVRSFAEYGKLSGRSLEDMQAGARVEVDPRKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEPSWDSPWG GRPGWHIECSAM+ YL + FDIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKAAKPGEPSWDSPWGSGRPGWHIECSAMAEKYLGNGFDIHGGGFDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AAC+ YWMHNG +T N EKMSKSLGNFF +R+I ++ P +R +L+S HYRSPL
Sbjct: 241 EAACKAPFARYWMHNGFITINQEKMSKSLGNFFLVREILAKFPPDVVRWYLLSTHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++ +L + + I L+ A+ G+ + E+ + ++R EF M
Sbjct: 301 DFDDEKLVMSGKGLERIKTALRLLYEAMDLPVYEGEDIQGAENFEETLQRIRLEFEKAMD 360
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ + F D K +N + L K L + + L + +K+ R+LG+L
Sbjct: 361 DDFNTA-LAISYFFDLAKEVNIYVGKLNSK----VTLEMRKILDQAHTLIKDFNRVLGIL 415
>gi|344340320|ref|ZP_08771246.1| cysteinyl-tRNA synthetase [Thiocapsa marina 5811]
gi|343799978|gb|EGV17926.1| cysteinyl-tRNA synthetase [Thiocapsa marina 5811]
Length = 466
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/384 (51%), Positives = 252/384 (65%), Gaps = 17/384 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+NS+T++KE F PI KV MYVCG+T YD HLGHAR V FD++YRYL L EV
Sbjct: 2 LQIHNSLTRRKEPFEPIEPRKVRMYVCGMTVYDYCHLGHARVMVVFDVVYRYLRALGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY+RN TD+DDKIIRRA + GE+ +L++R+ Q D L LPPT +PR + HM++I
Sbjct: 62 TYIRNITDIDDKIIRRAAEAGESMQALTDRFIQAMHEDSDALGILPPTDEPRATAHMDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I AYV E GDV++AV + YG+LSG+ ++ RAG RV VD KR+P DF
Sbjct: 122 LAMIGTLIEKGLAYVAENGDVYYAVARFAGYGKLSGKDPQDLRAGARVEVDEAKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK GEP+WDSPWGPGRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 ALWKSAKPGEPAWDSPWGPGRPGWHIECSAMSTCALGHHFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A ++ V+ WMHNG V N EKMSKSLGNFFT+R+I +R+ P +R+F++++ YRSP
Sbjct: 242 SEGATGETFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILQRFRPEEVRYFILTSQYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC--INKLRDEFHA 375
LNY L+ A A+ +Y L+ + P A D + FHA
Sbjct: 302 LNYDDEHLEQARAALTRLYTALR-------------GVPDVAPDAVDASVAAPFVERFHA 348
Query: 376 RMSDDLNTSHILTGAFQDALKFIN 399
M DD NT L F D ++ +N
Sbjct: 349 AMDDDFNTPEALAVLF-DLVREVN 371
>gi|147676630|ref|YP_001210845.1| cysteinyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
gi|187629838|sp|A5D5M0.1|SYC_PELTS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146272727|dbj|BAF58476.1| cysteinyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
Length = 484
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/417 (49%), Positives = 264/417 (63%), Gaps = 5/417 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T++KE F P G+V MYVCG T Y+ HLG+AR V FD + RYL H EV
Sbjct: 1 MEIYNTLTRRKENFQPREPGRVCMYVCGPTTYNYIHLGNARPLVFFDTVRRYLIHKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTDVDDKII RA + G++PL+L+ RY EY D L P VS+H+ I
Sbjct: 61 LFVQNFTDVDDKIINRAQEEGDDPLALARRYIGEYFKDADALNVRRADRHPLVSEHIPDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
M+ +++ AYVV+G+V+F V K YG+LSG+ LE+ +AG RV VD RKR+P DFA
Sbjct: 121 IKMVDELVKKGAAYVVDGNVYFEVRKFAGYGKLSGRTLEDMQAGARVEVDPRKRDPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP WDSPWGPGRPGWHIECSAMS YL + FDIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKAAKPGEPCWDSPWGPGRPGWHIECSAMSLKYLGTNFDIHGGGYDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA V YWMHNG +T N EKMSKSLGNFF +R I ++ P +R FL+S HYRSPL
Sbjct: 241 EAATGQPFVRYWMHNGFITVNEEKMSKSLGNFFLVRDILAKFPPELVRFFLLSTHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++ ++ +A + I +L+ AL G A + D +++R F A M
Sbjct: 301 DFDGEKMAAAGRGLERIKTSLRLLYEALERPVSEGVQA---VCSRDPFDEIRASFEAAMD 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
DD NT+ + GA D + N+++ Q + L +L + NE EVL I
Sbjct: 358 DDFNTA-LAIGAVFDLAREANTAVQRTGPAVSGQDRQILQYAL-DLFNEFNEVLGIF 412
>gi|414153547|ref|ZP_11409870.1| Cysteine--tRNA ligase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454945|emb|CCO07774.1| Cysteine--tRNA ligase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 486
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/402 (48%), Positives = 260/402 (64%), Gaps = 1/402 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T+ K+ F P +GKV MYVCG T Y+ HLG+AR V FD + RY + +V
Sbjct: 1 MQIYNTLTKTKQEFIPREKGKVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYFIYKGYQV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTDVDDKII+RA + +PL L+ RY +E+ D L + P+VS+H+ +I
Sbjct: 61 NYVQNFTDVDDKIIKRAWEEQTDPLELAQRYIREFFKDADALNVMRADKHPKVSEHIAEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I Q+ AYV +GDV+FAV P YG+LSG+ LE+ +AG RV +D RK++P DFA
Sbjct: 121 IDLIKQLEQQGHAYVADGDVYFAVRSFPGYGKLSGRSLEDMQAGARVEIDPRKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEPSW SPWG GRPGWHIECSAM+A YL + FDIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKAAKPGEPSWPSPWGAGRPGWHIECSAMAAKYLGNGFDIHGGGFDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AAC YWMHNG +T N EKMSKSLGNFF +R+I ++ P +R +L+S HYRSPL
Sbjct: 241 EAACGQPFARYWMHNGFITVNQEKMSKSLGNFFLVREILAKFPPEVVRWYLLSTHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++ +L A + + L+ AL Q+ A D + LR +F M
Sbjct: 301 DFDDEKLAMAGKGLERLKTALRLLYEALELPQQQAAMADEGGDLADKLATLRLDFEKAMD 360
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES 420
DD NT+ ++ F+ A K IN + L K +Q+ L+++
Sbjct: 361 DDFNTALAISVFFELA-KEINIFVGRLDGKLTDRQKDLLVKA 401
>gi|390950398|ref|YP_006414157.1| cysteinyl-tRNA synthetase [Thiocystis violascens DSM 198]
gi|390426967|gb|AFL74032.1| cysteinyl-tRNA synthetase [Thiocystis violascens DSM 198]
Length = 462
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/417 (48%), Positives = 264/417 (63%), Gaps = 18/417 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++T+QKE F PI GKV MYVCG+T YD HLGHAR V FD++YRYL+ L +V
Sbjct: 2 LQIHNTLTRQKETFQPIEPGKVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLKALGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY+RN TD+DDKIIRRA + GE +L+ R+ Q D L LPPT +PR + HM+ I
Sbjct: 62 TYIRNITDIDDKIIRRAAENGEPFPALTERFIQAMHEDSETLGILPPTDEPRATAHMDDI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DMI +I+ AYV + GDV++AV + P+YG+LSG+ ++ R+G RV + KR+P DF
Sbjct: 122 LDMIQTLIDKGFAYVADNGDVYYAVSRFPDYGKLSGKNPQDLRSGARVEIGEAKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK EP+WDSPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 ALWKAAKPDEPAWDSPWGAGRPGWHIECSAMSTCALGNHFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMHNG V N EKMSKSLGNFFT+R+I +RY P +R+F++++ YRSP
Sbjct: 242 SEGATGEPFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILQRYRPEEIRYFILTSQYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY L +A A+ Y L+ + P + R+ FHA M
Sbjct: 302 LNYDDEHLQNARSALTRFYTALRGL-------------PSVEPVGGET---FRERFHAAM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI-ESLRKIENEVKEVLR 433
DD NT L F A + + L++ +L + E L ++++ + LR
Sbjct: 346 DDDFNTPEALAVLFDLAREINRVRADDLERAAALGAELRRMGEVLGILQDDAERYLR 402
>gi|320354379|ref|YP_004195718.1| cysteinyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
gi|320122881|gb|ADW18427.1| cysteinyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
Length = 487
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/422 (45%), Positives = 268/422 (63%), Gaps = 7/422 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++++IYN+++++KE+ P+ G V +YVCG+T+YD H+GHAR+A+ FD++ RYL H
Sbjct: 1 MSIRIYNTLSRRKEILQPLEEGHVKLYVCGITSYDYCHIGHARSALVFDMVVRYLRHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+VRNFTD+DDKII RAN+ G + SL+ R+ E+ DM L L P +P+ ++H+
Sbjct: 61 KVTFVRNFTDIDDKIINRANEQGIDSASLALRFINEFYTDMDALGTLRPDLEPKATEHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ +I +I+ AY +GDV+F VE+ YG+LSG+ L + +AG RV V+ +K +P D
Sbjct: 121 EMIGLIEDLIDKGMAYPADGDVYFRVERFVGYGQLSGRGLADMQAGARVEVNDKKEHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GEP W SPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FVLWKAAKPGEPKWPSPWGEGRPGWHIECSAMSRKYLGETFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QSC A + WMH+G VT EKMSKSLGNF TIR + ++Y P LR F+ S YR+
Sbjct: 241 QSCGASGKPFANLWMHHGFVTIKEEKMSKSLGNFLTIRDVLKQYEPEVLRLFIFSTQYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+++ L A + +Y+ L +V P + + I + L D FH
Sbjct: 301 PLDFTETALHDARAGLERMYECL--AQVEDLPAEGTEGASVITDKDRTALASLVDRFHQA 358
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M +D NT+ L F D +K +N L L ++ P L+L LR E +E+ +LG
Sbjct: 359 MDNDFNTAQALAHLF-DTVKLLNKVLRTLPER-PAAADLNL---LRTTAAEFRELAGVLG 413
Query: 437 LL 438
L+
Sbjct: 414 LV 415
>gi|344344279|ref|ZP_08775143.1| cysteinyl-tRNA synthetase [Marichromatium purpuratum 984]
gi|343804236|gb|EGV22138.1| cysteinyl-tRNA synthetase [Marichromatium purpuratum 984]
Length = 462
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 256/407 (62%), Gaps = 22/407 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+NS+T+QK F P+ GKV MYVCG+T YD HLGHAR V FD++YRYL L EV
Sbjct: 2 LQIHNSLTRQKTPFQPLEPGKVRMYVCGMTVYDYCHLGHARVMVVFDVVYRYLRALGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + GE+ +L+ R+ D A L L PT +PR + H+++I
Sbjct: 62 TYVRNITDIDDKIIRRAAENGESCAALTERFIAAMHEDAAALGVLAPTSEPRATAHIDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ M+ +I+ AY + GDV++AV + P YG+LSG+ ++ RAG RV VD KR+P DF
Sbjct: 122 QTMVATLIDKGLAYAADNGDVYYAVSRFPGYGKLSGKDPQDLRAGARVEVDEAKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK AK GEPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 ALWKGAKPGEPSWSSPWGEGRPGWHIECSAMSTCCLGNHFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + WMHNG V N EKMSKSLGNFFT+R++ ER+ +R+F++++HYRSP
Sbjct: 242 SEGATGEPFAEVWMHNGFVRINEEKMSKSLGNFFTVREVLERFRAEEIRYFILTSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ QL SA A+ +Y L+ A +P + T F A M
Sbjct: 302 LNYADEQLQSARGALTRLYTALRGLPEAEAPAESAFAT----------------RFTAAM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 424
DD NT L F+ + +N + +Q +L LR++
Sbjct: 346 DDDFNTPEALAVLFE-----LAREVNRARDAGEPEQAAALGAELRRL 387
>gi|114777193|ref|ZP_01452204.1| cysteinyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
gi|114552338|gb|EAU54821.1| cysteinyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
Length = 459
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/409 (48%), Positives = 254/409 (62%), Gaps = 15/409 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L +YN++ ++KE F PI G +GMYVCGVT YD H+GHAR + FD++YR+L H
Sbjct: 1 MSLMLYNTIKREKEAFVPIRPGHIGMYVCGVTVYDYCHVGHARVMIVFDVIYRWLMHSGF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YVRNFTDVDDKII+RA + G +L+N + D L CL PT++PR + HM+
Sbjct: 61 DVDYVRNFTDVDDKIIKRAAERGIAIDALTNEMIDAFHADADALGCLRPTHEPRATAHMD 120
Query: 137 QIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+ MI ++ D AYV E GDV +AV +YG+LSG++++ +G RV VD KR+P
Sbjct: 121 AMISMIQALMEKDMAYVSESGDVLYAVRGFSDYGQLSGKKIDELESGSRVDVDQSKRDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AKA EP+W SPWG GRPGWHIECSAMS +L FDIHGGG+DL FPHHENEI
Sbjct: 181 DFVLWKMAKADEPAWASPWGQGRPGWHIECSAMSCGHLGDTFDIHGGGMDLKFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQ+ AA YW+HNG V N EKMSKSLGNFFTIR++TERYHP LR F++ HYR
Sbjct: 241 AQARAANGGGFARYWLHNGFVNINAEKMSKSLGNFFTIREVTERYHPEVLRMFMLGTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPL++S LD A + +Y+T + C QE G T A L F
Sbjct: 301 SPLDFSDAALDVAKSGLDRLYKTAKRC-------QESGVTGAGGQAL------LPHHFTT 347
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 424
M DD NT L F D + +N LN + Q + + +L I
Sbjct: 348 AMDDDFNTPEALAVLF-DTSRALNKGLNEAQDVTALAGQFTAMSALLGI 395
>gi|224369425|ref|YP_002603589.1| protein CysS2 [Desulfobacterium autotrophicum HRM2]
gi|223692142|gb|ACN15425.1| CysS2 [Desulfobacterium autotrophicum HRM2]
Length = 477
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/424 (46%), Positives = 269/424 (63%), Gaps = 20/424 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L+IYN+ T+ KE F P+ + KV MYVCG T YD SH+GHAR+ V FD+++R+L H
Sbjct: 1 MSLRIYNTQTRTKETFIPLEKNKVKMYVCGPTVYDTSHIGHARSVVVFDVVFRWLRHSGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YVRNFTDVDDKII RAN+LG++P +S RY +E+ +M L L PT +P+ ++H++
Sbjct: 61 DVCYVRNFTDVDDKIINRANELGQDPKEISERYIKEFHNEMDALNVLRPTIEPKATEHIQ 120
Query: 137 QIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
I D I ++I+ AY V G DVFF+++ YG+LSG+ ++ G R+AVD +KR+P
Sbjct: 121 DIIDFIQRLIDKGKAYHVPGSDVFFSIQSFDEYGKLSGRNPDDMMPGSRIAVDDKKRDPK 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK K GEPSW SPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEI
Sbjct: 181 DFTLWKPVKPGEPSWPSPWGDGRPGWHIECSAMSYKYLGESFDIHGGGKDLIFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA + V YW+HNG V NNEKMSKSLGNF I+ + + YHP +R FL+S HYR
Sbjct: 241 AQSEAAFGKTFVRYWIHNGFVDINNEKMSKSLGNFTMIKDVLKDYHPEVMRMFLLSKHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR-INPAAEDCINKLRDEFH 374
SP++Y+ +D + +Y ++ + A G T + P E F
Sbjct: 301 SPIDYNDTSMDEVISGLDRLYAFVERAQGA-------GATVNGVEPGKEWA------SFE 347
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
A M DD NT+ + F D +K N L+ +Q + + ++ + ++K + I
Sbjct: 348 AAMDDDFNTARAMATLF-DTVKTGNRILD----QQGETVSPETLSAVSTLCADLKRMGSI 402
Query: 435 LGLL 438
LG+L
Sbjct: 403 LGIL 406
>gi|327399102|ref|YP_004339971.1| cysteinyl-tRNA synthetase [Hippea maritima DSM 10411]
gi|327181731|gb|AEA33912.1| cysteinyl-tRNA synthetase [Hippea maritima DSM 10411]
Length = 474
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/410 (47%), Positives = 267/410 (65%), Gaps = 8/410 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++ E F PI GKVGMYVCGVT YD H+GHAR+AV+FD++YRYL+ +V
Sbjct: 2 LKIYNTLGKRLEEFKPIKNGKVGMYVCGVTVYDNCHIGHARSAVAFDVMYRYLKFKGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTDVDDKII RAN+ G + ++ RY EY DM L P +P+ ++H+ +I
Sbjct: 62 TFVKNFTDVDDKIINRANEEGVSCNEIAQRYIGEYYKDMYRLNIAKPEVEPKATEHINEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+++ ++ + AY V GDV++ VEK +YG+LSG+ ++ ++G RV ++ +K NP DFA
Sbjct: 122 IELVRKLQDMGYAYEVNGDVYYRVEKFKDYGKLSGKNIDELKSGARVEINDKKENPLDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK +K EP W SPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIAQS
Sbjct: 182 LWKRSKENEPKWKSPWGEGRPGWHIECSAMSMKYLGESFDIHGGGEDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA YW+HNG V N EKMSKSLGNFFTI+ I ++Y LR+FL+ HYRSP+
Sbjct: 242 EAATGKPFARYWIHNGFVRINKEKMSKSLGNFFTIKDILKKYDGQTLRYFLLLTHYRSPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++S LD+A +A+ Y +Q E + F+++GK ++ E + L F M
Sbjct: 302 DFSFEGLDAAKEALNRYYNFIQRLED--TEFEKNGK---VDELLEKRLKDLLARFEEAMD 356
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKK--KQPKQQQLSLIESLRKIEN 426
+D N + F +K N L+ + + K K + + +ES+ KI++
Sbjct: 357 EDFNAPKAIGEVFS-VIKTFNQYLDSITEGDKPKKAYKETFLESMNKIKS 405
>gi|301059000|ref|ZP_07199966.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
gi|300446881|gb|EFK10680.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
Length = 484
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/426 (46%), Positives = 266/426 (62%), Gaps = 15/426 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LK+YNS ++KE+F P+ GKVG+YVCGVT YDL H+GHAR+ + FD+L RY
Sbjct: 1 MPLKLYNSSIRKKEVFKPLNDGKVGLYVCGVTVYDLCHIGHARSTIVFDVLARYFRARGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRNFTD+DDKII RA L + P L+ + + DM L L +PR +D++E
Sbjct: 61 DVTYVRNFTDIDDKIIERAKLLKKAPKELAREFIDAFYEDMGKLGVLKADVEPRATDYVE 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ +M +++ AY GDV+F+V+ P YG LSG+ LE+ RAG RVAVD RKR+P D
Sbjct: 121 DMIEMTQTLMDRGYAYTEGGDVYFSVDSYPGYGSLSGRNLEDMRAGSRVAVDDRKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK+AK GEP W SPWGPGRPGWH+ECS MS +L FDIHGGG DL+FPHHENE A
Sbjct: 181 FVLWKSAKPGEPQWPSPWGPGRPGWHLECSVMSNRHLGPTFDIHGGGRDLLFPHHENERA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A YW+HNG VT +EKMSKSLGNF TIR ++YHP LR FL+S HYRS
Sbjct: 241 QSMCANDGEFARYWVHNGFVTVESEKMSKSLGNFLTIRDALKKYHPEVLRLFLLSKHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL++S + + + IY+ LQ L P + KT +ED ++ EF+ +
Sbjct: 301 PLDFSAKDVANLQSGLVRIYRMLQRLNDLLGP-GDGEKT------SEDSLSGASGEFYEK 353
Query: 377 ----MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
M DDLNT+ L F D ++ +N ++ ++ LS ++S R +++
Sbjct: 354 FCEMMDDDLNTAGALGLVF-DKVREMNRLMDPDGNGAVSEKALSSLKSQR---DQLLRAG 409
Query: 433 RILGLL 438
ILGL
Sbjct: 410 EILGLF 415
>gi|451947839|ref|YP_007468434.1| cysteinyl-tRNA synthetase [Desulfocapsa sulfexigens DSM 10523]
gi|451907187|gb|AGF78781.1| cysteinyl-tRNA synthetase [Desulfocapsa sulfexigens DSM 10523]
Length = 489
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/428 (44%), Positives = 271/428 (63%), Gaps = 10/428 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +KIYN++T++KEL PI G + +YVCG+T+YD H+GHAR+A++FD++ RYL +
Sbjct: 1 MPVKIYNTLTRKKELLKPIEPGHIKLYVCGITSYDYCHIGHARSALAFDMIVRYLRYRGN 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTY+RNFTD+DDKII RA + G L+NR+ E+ VDM L PT +P+ ++H++
Sbjct: 61 KVTYIRNFTDIDDKIIARAEEQGTTTEELANRFIDEFYVDMDRLGVDRPTMEPKATEHIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ D+++++I+ AY GDV++ V YG+LSG+ L++ +AG RV+V+ K +P D
Sbjct: 121 EMIDLVSELIDKGMAYPAGGDVYYKVHSFDGYGKLSGRNLDDMQAGARVSVNENKTDPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F +WKA+K GEPSWDSPWGPGRPGWHIECSAMS YL S FDIHGGG DLIFPHHENE+A
Sbjct: 181 FVMWKASKPGEPSWDSPWGPGRPGWHIECSAMSRKYLGSTFDIHGGGQDLIFPHHENELA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V+ W+H+G VT +EKMSKSLGNF TIR I YHP LR F+ S YR+
Sbjct: 241 QSEGANNKPFVNMWIHHGFVTIRDEKMSKSLGNFLTIRDILAHYHPEVLRFFIFSTQYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC--INKLRDEFH 374
PL++S + A + +Y+ + C+ + H +A I +D I L + F
Sbjct: 301 PLDFSEAAMQDAMTGLDRLYECIAACDALGTA---HSDSAEIVATPKDIKKIESLEERFQ 357
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M +D NT+ F+ +K IN + L P S L+ ++ ++ I
Sbjct: 358 KAMDNDFNTAQAQASLFE-TVKVINKIIQQL----PDVPATSDYNLLKSGSADIVKLAAI 412
Query: 435 LGLLPPGA 442
+G++ A
Sbjct: 413 MGIVQENA 420
>gi|148266184|ref|YP_001232890.1| cysteinyl-tRNA synthetase [Geobacter uraniireducens Rf4]
gi|189082065|sp|A5G949.1|SYC_GEOUR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146399684|gb|ABQ28317.1| cysteinyl-tRNA synthetase [Geobacter uraniireducens Rf4]
Length = 494
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/429 (46%), Positives = 270/429 (62%), Gaps = 13/429 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L++YN++T KE F PI GKV MYVCGVT YD H+GHARA V FD++YRYL L
Sbjct: 1 MALRVYNTLTGTKEDFVPIEPGKVKMYVCGVTVYDHCHIGHARANVVFDVIYRYLRSLGL 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YVRN+TD+DDKII RAN G ++S R+ +E+ DMA L L PT QP+ ++H+
Sbjct: 61 EVNYVRNYTDIDDKIINRANREGVAYDAISERFIKEFDRDMAQLGLLLPTSQPKATEHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I ++ +I+ AY + GDV F VEK Y +LS + LE+ +AG R+ VD RKR+P D
Sbjct: 121 EIITLVQTLIDKGFAYQMGGDVNFCVEKFDPYLKLSKRNLEDMQAGARIEVDERKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK AK GEP W+SPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FVLWKEAKPGEPFWESPWGKGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YW+HNG V N+EKMSKSLGNFFTI+++ ++Y LR FL+SAHYRS
Sbjct: 241 QSEAASGKPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEVLDKYDSEVLRFFLLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG----KTARINPAAEDCINK---L 369
PL++S L A + IY+ L + L+ G + + A + +K L
Sbjct: 301 PLDFSDQNLTEAETGMERIYKALVAIDETLASNPATGGEEIDASSLGEAERELFDKSGSL 360
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
F M DD NT+ + G D ++ +N L+ + K++ +L +++ +
Sbjct: 361 PLRFREAMDDDFNTA-LAMGHIFDLVRCVNRVLS-----EAKERSNTLSALCAQVKANIG 414
Query: 430 EVLRILGLL 438
++ +LG+
Sbjct: 415 KIADVLGIF 423
>gi|291279235|ref|YP_003496070.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
gi|290753937|dbj|BAI80314.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
Length = 481
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/426 (45%), Positives = 269/426 (63%), Gaps = 8/426 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L I+N++T +KE F P+ KV MYVCGVT YD H+GHAR++V FD++ RYL + + +V
Sbjct: 2 LIIFNTLTGKKEEFIPLQDNKVRMYVCGVTVYDYCHIGHARSSVVFDIIRRYLIYKEYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTD+DDKII+R+N+ + L+ ++ +E+ DM L +PP + P+ ++ ++++
Sbjct: 62 TFVKNFTDIDDKIIKRSNEENIHWKELTEKFIKEHDYDMEKLNIMPPDFTPKATEFIDEM 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ ++I AYVV+GDV++ VEK +YG+LS + L+ AG RV VD RK NP DFA
Sbjct: 122 IKLCEKLIEKGYAYVVDGDVYYRVEKFKDYGKLSKRNLDELLAGARVEVDERKENPLDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK +K EP W+SPWG GRPGWHIECS MSA L FDIHGGG DLIFPHHENEIAQS
Sbjct: 182 LWKKSKENEPYWESPWGKGRPGWHIECSVMSAKLLGIPFDIHGGGKDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA + YW+HNG V N EKMSKSLGNFFTIR+I + + P LR FL++ HYRSP+
Sbjct: 242 EAAEEKMFAKYWIHNGFVNINKEKMSKSLGNFFTIREIIKEFDPEVLRFFLLTTHYRSPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++S L A ++ IY L D E + + N E+ + EF M
Sbjct: 302 DFSFDHLVEAEQSLNRIYTFLDDLEHYVVSKKGKNYLEEANKIFEN----FKKEFETSMD 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD N++ L F D +K IN LN K+ ++ L L + +KI V +VL I+
Sbjct: 358 DDFNSAKALAAIF-DYIKEINRLLNQKVVKETYEEILKLTNNFKKI---VNQVLGIINKT 413
Query: 439 PPGAYS 444
P ++
Sbjct: 414 PKEWFA 419
>gi|18977396|ref|NP_578753.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
gi|18893083|gb|AAL81148.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
Length = 483
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/416 (46%), Positives = 255/416 (61%), Gaps = 3/416 (0%)
Query: 13 PKMDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLE 72
P+ LK+YN++T+QKE F P+ G+V MYVCG T YD HLGHAR ++FD++ RYLE
Sbjct: 2 PRGKNMLKVYNTLTKQKEEFKPLREGEVKMYVCGPTVYDYPHLGHARTYIAFDVIRRYLE 61
Query: 73 HLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVS 132
H V V NFTD+DDKII+RA + GE+P L+ R+ + +L DM L+ P PRV+
Sbjct: 62 HKGYTVLMVMNFTDIDDKIIKRARETGEDPKELAERFIKIFLEDMEALKVKPADIYPRVT 121
Query: 133 DHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKR 192
DH++ I + I ++ AY ++F V+K P YG+LSG ++E+ + G RV K+
Sbjct: 122 DHIDDIIEFIGKLKEKGYAYEGSDGIYFEVKKFPEYGKLSGVKIEDLQKGARVEPGEGKK 181
Query: 193 NPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHE 252
NP DFALWK AK GEP WDSPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHE
Sbjct: 182 NPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPHHE 241
Query: 253 NEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 312
NEIAQS A V YW+H G V EKMSKSLGNF TIR++ +RY P +R F++
Sbjct: 242 NEIAQSEACFGHEWVKYWLHTGFVMVKGEKMSKSLGNFVTIRELLKRYEPEVIRFFVLQK 301
Query: 313 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 372
HYRSPL Y+ L A + + +Y TL++ VAL + + + I + + +
Sbjct: 302 HYRSPLEYTEEGLQHAKNNLQRLYNTLENIRVALRNAEISYTWGELEFKTYEIIREGKRK 361
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
F+ M DD NT+ L F+ A IN L K PK+ L KI +EV
Sbjct: 362 FYEAMDDDFNTAEALKAVFEVA-NAINKYLTEANK--PKESILRKALEFFKIVSEV 414
>gi|114048058|ref|YP_738608.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-7]
gi|123030490|sp|Q0HTK4.1|SYC_SHESR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|113889500|gb|ABI43551.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-7]
Length = 461
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/382 (51%), Positives = 250/382 (65%), Gaps = 17/382 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL + EV
Sbjct: 4 LKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TD+DDKII+RAN+ E+ +L++R E D L + P ++PR + H+ +I
Sbjct: 64 NFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHIAEI 123
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ +++ AYV +GDV F+V P YGRLSGQ LE +AG RV VD K+NP DF
Sbjct: 124 IDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQNPMDF 183
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 184 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 243
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y P +R+FL+S HYRS
Sbjct: 244 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDPETVRYFLLSGHYRSQ 303
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NYS L A A+ +Y ++D ++ ++P AE+ + K F A M
Sbjct: 304 INYSEENLKQARAALERLYTAIKDVDLTVAP-----------APAEEFVAK----FKAAM 348
Query: 378 SDDLNTSHILTGAFQDALKFIN 399
DD NT + F D ++ IN
Sbjct: 349 DDDFNTPEAYSVLF-DMVREIN 369
>gi|113970833|ref|YP_734626.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-4]
gi|123029526|sp|Q0HH98.1|SYC_SHESM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|113885517|gb|ABI39569.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-4]
Length = 461
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/382 (51%), Positives = 250/382 (65%), Gaps = 17/382 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL + EV
Sbjct: 4 LKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TD+DDKII+RAN+ E+ +L++R E D L + P ++PR + H+ +I
Sbjct: 64 NFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHITEI 123
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ +++ AYV +GDV F+V P YGRLSGQ LE +AG RV VD K+NP DF
Sbjct: 124 IDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQNPMDF 183
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 184 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 243
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y P +R+FL+S HYRS
Sbjct: 244 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDPETVRYFLLSGHYRSQ 303
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NYS L A A+ +Y ++D ++ ++P AE+ + K F A M
Sbjct: 304 INYSEENLKQARAALERLYTAIKDVDLTVAP-----------APAEEFVAK----FKAAM 348
Query: 378 SDDLNTSHILTGAFQDALKFIN 399
DD NT + F D ++ IN
Sbjct: 349 DDDFNTPEAYSVLF-DMVREIN 369
>gi|442803750|ref|YP_007371899.1| cysteine--tRNA ligase CysS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442739600|gb|AGC67289.1| cysteine--tRNA ligase CysS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 462
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/428 (46%), Positives = 266/428 (62%), Gaps = 19/428 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T++KE F P+ G+V MY CG T YD H+G+AR + FD+L R+LE+ +V
Sbjct: 1 MKLYNTLTKRKEEFIPLKPGEVKMYSCGPTVYDYFHIGNARPFIIFDVLRRFLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+IRRAN+ G+ ++ +Y +EY VD L PTY PR +++++ I
Sbjct: 61 IFVQNFTDIDDKMIRRANEEGKTVAEIAEKYIREYYVDAHGLGIKDPTYAPRATENIDAI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
DMI +++ AYVV+GDV+F K YG+LSG RLE+ G R+ VD RK N DFA
Sbjct: 121 IDMIKTLVDKGYAYVVDGDVYFKTSKFEEYGKLSGHRLEDLELGARIEVDERKENAMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+WDSPWG GRPGWHIECSAM+ YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAQKPGEPAWDSPWGKGRPGWHIECSAMANRYLGETIDIHSGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+HNG + NNEKMSKS GNFFT+R I + Y +R FL+SAHYRSP+
Sbjct: 241 EACNGKPFARYWLHNGFININNEKMSKSRGNFFTVRDIAKHYDYEVIRFFLLSAHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHA 375
N+S L+ A A+ IY+ + LS A + ED L RD F
Sbjct: 301 NFSDALLEQAKSALNRIYECRDNLRFFLS-------KAEKDTFEEDIYGNLDIYRDRFIE 353
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL--------RKIENE 427
M DDLNT+ L F+ ++ IN+ + K+ + L L++ L ++ EN+
Sbjct: 354 AMEDDLNTADALAAIFE-LVREINTRITANAGKKTISKALDLLDELTGVLGIMRKEYEND 412
Query: 428 VKEVLRIL 435
+ E +R L
Sbjct: 413 LDENIRAL 420
>gi|83644974|ref|YP_433409.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
gi|109894904|sp|Q2SK40.1|SYC_HAHCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|83633017|gb|ABC28984.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
Length = 467
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/421 (48%), Positives = 269/421 (63%), Gaps = 24/421 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIY+S++QQKE F PI GKVG+YVCG+T YD HLGHAR V FD++ RYL +V
Sbjct: 2 LKIYSSLSQQKEEFKPIQAGKVGIYVCGMTVYDYCHLGHARVLVCFDIITRYLRAKGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKI+ RA D GE+ +L+ R+ D L L PT +PR + H+++I
Sbjct: 62 NYVRNITDVDDKILNRARDNGESVDALTARFIDAMHEDERALGVLSPTSEPRATGHIDEI 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++++ AY GDV+++VE+ +YG+LS Q+L+ RAG R+ VD+ KR+PADF
Sbjct: 122 IAMIQRLMDKGYAYHASNGDVYYSVEQFADYGKLSKQKLDEIRAGARIEVDAEKRSPADF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GE SWDSPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGELSWDSPWGEGRPGWHIECSAMSTRCLGDTFDIHGGGPDLKFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+YWMH G V N EKMSKSLGNFFTIR+I ++Y +R+FL S+HYRS
Sbjct: 242 SEAATGCKYVNYWMHAGAVRVNKEKMSKSLGNFFTIREILDKYPAEVVRYFLASSHYRSA 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++YS + L+ A + +Y ++++ + E G + P + + R+ FH M
Sbjct: 302 IDYSDVALEEARSGLERLYNSIREL------YGELGAVSMDEP----LVGEYRERFHQAM 351
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NTS + F D K +N + KK+ + + LSL + + ++ +LGL
Sbjct: 352 DDDFNTSSAVAVLF-DMAKAVN-----VAKKEDRTRALSLAKGM-------VDLAEVLGL 398
Query: 438 L 438
L
Sbjct: 399 L 399
>gi|288940189|ref|YP_003442429.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
gi|288895561|gb|ADC61397.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
Length = 461
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/375 (52%), Positives = 244/375 (65%), Gaps = 17/375 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+NS+T+QK F PI GKV MYVCG+T YD HLGHAR V FD++YRYL L +V
Sbjct: 2 LQIHNSLTRQKAPFQPIEPGKVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLRALGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY+RN TD+DDKIIRRAN+ GE +L+ R+ Q D L LPPT +PR + H+ +I
Sbjct: 62 TYIRNITDIDDKIIRRANENGEPFQALTERFIQAMREDSEALGVLPPTDEPRATAHIGEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ +I+ AYV + GDV++AV + P+YG+LSG+ + RAG RV + KR+P DF
Sbjct: 122 LAMVQTLIDKGLAYVADNGDVYYAVSRFPDYGKLSGKDPADLRAGSRVEIGESKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEP+WDSPWGPGRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 ALWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTCCLGNHFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMHNG V N EKMSKSLGNFFT+R+I Y P +R+F++++HYRSP
Sbjct: 242 SEGATGEPFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILRLYRPEEVRYFILTSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY L A A+ +Y L+ A PA + R F A M
Sbjct: 302 LNYDDSALQKARAALTRLYTALRGLPEAA-------------PAEGEA---FRARFQAAM 345
Query: 378 SDDLNTSHILTGAFQ 392
DD NT L F+
Sbjct: 346 DDDFNTPEALAVLFE 360
>gi|397651531|ref|YP_006492112.1| cysteinyl-tRNA ligase [Pyrococcus furiosus COM1]
gi|30316338|sp|Q8U227.2|SYC_PYRFU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|393189122|gb|AFN03820.1| cysteinyl-tRNA ligase [Pyrococcus furiosus COM1]
Length = 477
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/410 (47%), Positives = 253/410 (61%), Gaps = 3/410 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YN++T+QKE F P+ G+V MYVCG T YD HLGHAR ++FD++ RYLEH V
Sbjct: 2 LKVYNTLTKQKEEFKPLREGEVKMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGYTV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
V NFTD+DDKII+RA + GE+P L+ R+ + +L DM L+ P PRV+DH++ I
Sbjct: 62 LMVMNFTDIDDKIIKRARETGEDPKELAERFIKIFLEDMEALKVKPADIYPRVTDHIDDI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I ++ AY ++F V+K P YG+LSG ++E+ + G RV K+NP DFA
Sbjct: 122 IEFIGKLKEKGYAYEGSDGIYFEVKKFPEYGKLSGVKIEDLQKGARVEPGEGKKNPEDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP WDSPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHENEIAQS
Sbjct: 182 LWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V YW+H G V EKMSKSLGNF TIR++ +RY P +R F++ HYRSPL
Sbjct: 242 EACFGHEWVKYWLHTGFVMVKGEKMSKSLGNFVTIRELLKRYEPEVIRFFVLQKHYRSPL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
Y+ L A + + +Y TL++ VAL + + + I + + +F+ M
Sbjct: 302 EYTEEGLQHAKNNLQRLYNTLENIRVALRNAEISYTWGELEFKTYEIIREGKRKFYEAMD 361
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
DD NT+ L F+ A IN L K PK+ L KI +EV
Sbjct: 362 DDFNTAEALKAVFEVA-NAINKYLTEANK--PKESILRKALEFFKIVSEV 408
>gi|408418553|ref|YP_006759967.1| cysteinyl-tRNA synthetase CysS [Desulfobacula toluolica Tol2]
gi|405105766|emb|CCK79263.1| CysS: cysteinyl-tRNA synthetase [Desulfobacula toluolica Tol2]
Length = 487
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/424 (45%), Positives = 274/424 (64%), Gaps = 10/424 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++LK+YN++ +KE F P+ GKV MYVCG T YD SH+GHAR+ V FD + R+L+ L+
Sbjct: 1 MSLKVYNTLHGRKEEFVPLNEGKVKMYVCGPTVYDTSHIGHARSVVVFDTILRWLQELEY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRNFTDVDDKII+++N+ GE +++ +Y E+ +M L L PT +P+ ++H+
Sbjct: 61 EVTYVRNFTDVDDKIIKKSNETGEACSAITEKYIDEFHNEMDALNVLRPTVEPKATEHIR 120
Query: 137 QIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
I D I +I+ AY VEG DV+F+++ YG+LSG+ ++ RAG R+AVD +K++P
Sbjct: 121 HIIDFIQMLIDKGKAYPVEGGDVYFSIDSFKEYGKLSGRNPDDMRAGARIAVDDKKKSPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF+LWK AK GEP W+SPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENE+
Sbjct: 181 DFSLWKPAKPGEPCWESPWGKGRPGWHIECSAMSYEYLGEGFDIHGGGKDLIFPHHENEL 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A V YW+HNG V NNEKMSKSLGNF I+++ + Y P +R FL+S HYR
Sbjct: 241 AQSEAVFGRQFVKYWIHNGFVDINNEKMSKSLGNFTMIKEVLDTYSPEVIRMFLLSNHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVA-LSPFQEHGKTARINPAAEDCINKLRDEFH 374
SP++YS + S + IY L+ E A +S ++ +RI+ + + +L ++F
Sbjct: 301 SPIDYSEDSMREVSMGLDRIYAFLERLENAGVSLYESQLDGSRIDGSRK---GELWNDFC 357
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
A M+DD N++ + F+ K N L L+E+L N++ + +
Sbjct: 358 AAMNDDFNSAKAIACVFEAVKKG-----NRLLDDANDSPGADLLETLNLFYNDIHAISNV 412
Query: 435 LGLL 438
LG+
Sbjct: 413 LGIF 416
>gi|407716366|ref|YP_006837646.1| cysteinyl-tRNA synthetase [Cycloclasticus sp. P1]
gi|407256702|gb|AFT67143.1| Cysteinyl-tRNA synthetase, class Ia [Cycloclasticus sp. P1]
Length = 463
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/395 (50%), Positives = 260/395 (65%), Gaps = 22/395 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI +G+V +YVCG+T YD H+GHAR V FD++ RYL++L V
Sbjct: 4 LKIHNTLTKQKETFVPINKGEVNLYVCGMTVYDFCHIGHARVMVVFDVVSRYLKYLGYNV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII R+ + GE+ L+ R+ E D A L L P +P +D ME I
Sbjct: 64 KYVRNITDIDDKIITRSIESGEDFKQLTKRFIDEMHQDEASLNVLSPDIEPLATDSMEAI 123
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI Q+I ND AYV DV++ VE NYG+LSG++L++ AGERV VDS KRNP DF
Sbjct: 124 ITMIEQLIANDNAYVGPNNDVYYCVESFENYGQLSGRKLDDMNAGERVDVDSSKRNPFDF 183
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK+AK EPSW SPWG GRPGWHIECSAM+ L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 184 VLWKSAKPDEPSWSSPWGNGRPGWHIECSAMATCCLGNHFDIHGGGMDLQFPHHENEIAQ 243
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+ WMHNG V ++EKMSKSLGNFFT+R + ++Y +R F++S+HYRSP
Sbjct: 244 SEAATGEKYVNTWMHNGFVRIDDEKMSKSLGNFFTVRDVLKKYRGEEIRFFVLSSHYRSP 303
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS QL + A+ +Y L+D ++P + K+ I ++F M
Sbjct: 304 LNYSDDQLTESRSALERLYTALRD----VTPVKNEVKSTYI------------EQFENAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 412
+DD N++ + F+ A + LN LK QP+Q
Sbjct: 348 NDDFNSAKAIAVLFECA-----NELNKLKHTQPEQ 377
>gi|14590527|ref|NP_142595.1| cysteinyl-tRNA synthetase [Pyrococcus horikoshii OT3]
gi|6831682|sp|O58370.1|SYC_PYRHO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|3257043|dbj|BAA29726.1| 476aa long hypothetical cysteinyl-tRNA synthetase [Pyrococcus
horikoshii OT3]
Length = 476
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/424 (45%), Positives = 261/424 (61%), Gaps = 13/424 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TL+IYN++T+QKE F PI G+V MYVCG T YD HLGHAR ++FD++ RYLEH
Sbjct: 1 MTLRIYNTLTKQKEEFKPINEGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V V NFTD+DDKIIRRA + GE+P L+ ++ + +L DM L+ P PRV++H+E
Sbjct: 61 SVLMVMNFTDIDDKIIRRAKETGEDPAKLAEKFIKVFLEDMKALKVKPADIYPRVTEHIE 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I I ++ AY V+F V+K YG+LSG +LE R G RV K+NP D
Sbjct: 121 DIIQFIERLKEKGYAYEGSDGVYFEVQKFKEYGKLSGVKLEELRKGARVEPGEGKKNPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKKAKPGEPKWESPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V YW+H G V EKMSKSLGNF T+R++ +RY P +R F++ HYRS
Sbjct: 241 QSEACFGHEWVHYWLHTGFVMVKGEKMSKSLGNFVTVRELLQRYSPEVIRFFVLQKHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+YS L A + + +Y TL++ +A+ + + A + I + R +F+
Sbjct: 301 PLDYSEEGLQHAKNNLERLYNTLENIRIAMENAELAYTWDENDFKAYNSIKEARRKFYEA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLN--MLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT+ L F+ +++++N + + ++PK+ LRK + V I
Sbjct: 361 MDDDFNTAEALKAVFE-----VSNAINKYITEAEKPKES------VLRKAWEFFRTVGEI 409
Query: 435 LGLL 438
G+
Sbjct: 410 FGIF 413
>gi|296131811|ref|YP_003639058.1| cysteinyl-tRNA synthetase [Thermincola potens JR]
gi|296030389|gb|ADG81157.1| cysteinyl-tRNA synthetase [Thermincola potens JR]
Length = 487
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/397 (49%), Positives = 263/397 (66%), Gaps = 16/397 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+K+YN+ T++KE F P GKV MYVCG T Y+L HLG+AR + FD + RY E+
Sbjct: 1 MTIKLYNTCTRKKEEFIPRQPGKVDMYVCGPTTYNLIHLGNARPLIVFDTVRRYFEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYV+NFTD+DDKII RA + +P++L+ +Y +EY D A L T PRVS+H++
Sbjct: 61 QVTYVQNFTDIDDKIINRAREENTDPITLAAKYIREYFKDAAALGVREATVHPRVSEHLD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I +MI I+ N AY ++GDV+F+VE YG+LSG+ LE+ +AG RV VD+RKR+P D
Sbjct: 121 EIIEMIRGIMKNGYAYQLDGDVYFSVESFKGYGKLSGRSLEDMQAGARVDVDTRKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GEP+WDSPWG GRPGWHIECSAM+ YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKAAKPGEPAWDSPWGKGRPGWHIECSAMANKYLGMGFDIHGGGFDLIFPHHENEIA 240
Query: 257 QSCA-ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
Q+ A A YWMHNG +T N EKMSKSLGNFFT+R+I +Y P +R +++S HYR
Sbjct: 241 QAEAYAGCGPFARYWMHNGFITVNEEKMSKSLGNFFTVREILAKYDPEVVRFYMLSTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL------ 369
SPL++ +L+ ++ ++ L + E L + G+ NP E + L
Sbjct: 301 SPLDFDDTKLEMNRKSLSRLHNALDNIESILKT-NKFGEVE--NPELEKALADLLRAREK 357
Query: 370 --RDEFHARMSDDLNTSHILTGAF---QDALKFINSS 401
RD F M DD NT+ + F +D+ FI+++
Sbjct: 358 AVRD-FEEAMDDDFNTALAIAVLFDLARDSNAFIHAA 393
>gi|315230286|ref|YP_004070722.1| cysteinyl-tRNA synthetase [Thermococcus barophilus MP]
gi|315183314|gb|ADT83499.1| cysteinyl-tRNA synthetase [Thermococcus barophilus MP]
Length = 474
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/410 (46%), Positives = 257/410 (62%), Gaps = 3/410 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T+QKE F P+ G+V MYVCG T YD +HLGHAR ++FD++ RYLEH V
Sbjct: 1 MKVYNTLTKQKEEFKPLREGEVRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHKGYTV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
V NFTD+DDKIIRRA + GE+P L+ ++ + +L DM L+ P PRV++H+E I
Sbjct: 61 LMVMNFTDIDDKIIRRAQETGEDPKELAEKFLKYFLEDMKALKVKPADIYPRVTEHIEDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D + ++ AY V+F V++ +YG+LSG +LE R G RV KRNP DFA
Sbjct: 121 IDFVKKLEEKGYAYEGSDGVYFEVQRFRDYGKLSGIKLEELRKGARVEPGEGKRNPEDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP WDSPWG GRPGWHIECS MS YL +FDIHGGG DLIFPHHENEIAQ+
Sbjct: 181 LWKKAKPGEPKWDSPWGEGRPGWHIECSTMSTKYLGEQFDIHGGGNDLIFPHHENEIAQT 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V YW+H G V EKMSKSLGNF TIR++ +RY P +R F++ HYRSPL
Sbjct: 241 EACTGKEWVRYWLHTGFVMVKGEKMSKSLGNFVTIRELLQRYSPEVIRFFVLQKHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
+Y+ + A + + +Y T+++ +AL + K ++ + I + + +F+ M
Sbjct: 301 DYTEEGIQHAKNNLEKLYNTIENIRIALEKAEIPFKWSKEEFELYEVIREAKRKFYEAMD 360
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
DD NT+ + F+ A +N L ++K PK+ L K+ EV
Sbjct: 361 DDFNTAEAMKPIFEVA-NAVNKYLAKVEK--PKESVLRKALEFFKMVGEV 407
>gi|409913806|ref|YP_006892271.1| cysteinyl-tRNA synthetase [Geobacter sulfurreducens KN400]
gi|307635173|gb|ADI86121.2| cysteinyl-tRNA synthetase [Geobacter sulfurreducens KN400]
Length = 481
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/431 (46%), Positives = 265/431 (61%), Gaps = 14/431 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L++YN+++ KE F + G+V MYVCGVT YD H+GHARA V FD++YRYL H
Sbjct: 1 MALRVYNTLSGTKEDFVTLEPGRVKMYVCGVTVYDHCHIGHARANVVFDMIYRYLRHAGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRN+TDVDDKII RAN G +S R+ E+ DMA L PTYQP+ ++H+
Sbjct: 61 EVTYVRNYTDVDDKIINRANKEGVPFNVISERFIAEFDRDMAALGLDLPTYQPKATEHIA 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ +I +++ AY +GDV+F+VE Y +LS + LE +AG R+ V +KR+P D
Sbjct: 121 EMIQVIERLVAKGFAYAADGDVYFSVEAFDQYLKLSKRNLEEMQAGARIEVGEKKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK +K GEP WDSPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKGSKPGEPYWDSPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA YW+HNG V N EKMSKSLGNFFTI+++ E Y LR FL+SAHYRS
Sbjct: 241 QSEAANGKPFARYWIHNGFVNINAEKMSKSLGNFFTIKEVLESYDAEVLRFFLLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+++S L A+ + IY L + A++ + RI+ + L F
Sbjct: 301 PIDFSDQNLKEAAAGLERIYNALAGIDEAVAA--DGTGAGRIDEELAEKAAGLPTRFREA 358
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ L F D ++ +N L + +++ S R+ + V +LG
Sbjct: 359 MDDDFNTAQALGYVF-DLVRAVNRVL------AEGEIDRAVLASAREA---IDRVGAVLG 408
Query: 437 LLP--PGAYSE 445
L PGA+ E
Sbjct: 409 LFTSEPGAFVE 419
>gi|332158896|ref|YP_004424175.1| cysteinyl-tRNA synthetase [Pyrococcus sp. NA2]
gi|331034359|gb|AEC52171.1| cysteinyl-tRNA synthetase [Pyrococcus sp. NA2]
Length = 476
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/414 (45%), Positives = 259/414 (62%), Gaps = 7/414 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++LK+YN++T++KE F PI G+V MYVCG T YD HLGHAR ++FD++ RYLEH
Sbjct: 1 MSLKVYNTLTKRKEEFKPIREGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V V NFTD+DDKIIRRA + GE+P L+ ++ + +L DM L+ P PRV++H+
Sbjct: 61 TVLMVMNFTDIDDKIIRRARETGEDPKELAEKFIKVFLEDMNALKVKPADIYPRVTEHIG 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I D I ++ AY + V+F V+K YG+LSG ++E R G RV K+NP D
Sbjct: 121 DIIDFIKKLEEKGYAYEGKDGVYFEVQKFKEYGKLSGIKIEELRKGARVEPGEGKKNPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP WDSPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V YW+H G V EKMSKSLGNF T+R++ +RY P +R F++ HYRS
Sbjct: 241 QSEACFGHEWVRYWLHTGFVMVKGEKMSKSLGNFVTVRELLQRYSPEVIRFFVLQKHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+YS L A + + +Y TL++ +A+ + + + I R +F+
Sbjct: 301 PLDYSEEGLQHAKNNLERLYNTLENIRIAMERAELAYTWDEDDYEVYEAIKNARKKFYEA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLN--MLKKKQPKQQQLSLIESLRKIENEV 428
M DD NT+ L F+ +++++N + +K++PK+ L K+ +E+
Sbjct: 361 MDDDFNTAEALKAVFE-----VSNAINKYLTEKERPKEAILRKALEFFKVVSEI 409
>gi|39998454|ref|NP_954405.1| cysteinyl-tRNA ligase [Geobacter sulfurreducens PCA]
gi|61216254|sp|Q747A2.1|SYC_GEOSL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|39985401|gb|AAR36755.1| cysteinyl-tRNA synthetase [Geobacter sulfurreducens PCA]
Length = 481
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/431 (46%), Positives = 265/431 (61%), Gaps = 14/431 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L++YN+++ KE F + G+V MYVCGVT YD H+GHARA V FD++YRYL H
Sbjct: 1 MALRVYNTLSGTKEDFVTLEPGRVKMYVCGVTVYDHCHIGHARANVVFDMIYRYLRHAGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRN+TDVDDKII RAN G +S R+ E+ DMA L PTYQP+ ++H+
Sbjct: 61 EVTYVRNYTDVDDKIINRANKEGVPFNVISERFIAEFDRDMAALGLDLPTYQPKATEHIA 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ +I +++ AY +GDV+F+VE Y +LS + LE +AG R+ V +KR+P D
Sbjct: 121 EMIQVIERLVAKGFAYAADGDVYFSVEAFDQYLKLSKRNLEEMQAGARIEVGEKKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK +K GEP WDSPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKGSKPGEPYWDSPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA YW+HNG V N EKMSKSLGNFFTI+++ E Y LR FL+SAHYRS
Sbjct: 241 QSEAANGKPFARYWIHNGFVNINAEKMSKSLGNFFTIKEVLESYDAEVLRFFLLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+++S L A+ + IY L + A++ + RI+ + L F
Sbjct: 301 PIDFSDQNLKEAAAGLERIYNALAGIDEAVAA--DGTGAGRIDEELAEKAAGLPTRFREA 358
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ L F D ++ +N L + +++ S R+ + V +LG
Sbjct: 359 MDDDFNTAQALGYVF-DLVRAVNRVL------AEGEIDRAVLASAREA---IDRVGAVLG 408
Query: 437 LLP--PGAYSE 445
L PGA+ E
Sbjct: 409 LFTSEPGAFVE 419
>gi|357406814|ref|YP_004918738.1| cysteinyl-tRNA synthetase [Methylomicrobium alcaliphilum 20Z]
gi|351719479|emb|CCE25155.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Methylomicrobium
alcaliphilum 20Z]
Length = 462
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/351 (53%), Positives = 243/351 (69%), Gaps = 4/351 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKELF P + GK G+YVCG+T YD H+GHAR V FD++ RYL +L +
Sbjct: 2 LKIYNTLTRQKELFKPRLEGKAGLYVCGMTVYDYCHVGHARVMVVFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA D GE+ SL+ R+ + D L LPP +P+ + + +I
Sbjct: 62 TYVRNVTDIDDKIIQRARDNGEDFQSLTERFIEAMHEDERALSVLPPDIEPKATQSIPEI 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I N AYV GDVF++V K NYGRLSG+ L +AGERV ++ K++P DF
Sbjct: 122 LAMIEKLIANGIAYVGSNGDVFYSVSKFSNYGRLSGKNLAELQAGERVEIEQAKQDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP+W+SPWG GRPGWHIECSAMS L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWESPWGQGRPGWHIECSAMSTGCLGNHFDIHGGGMDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMHNG V N EKMSKSLGNFFT+R++ +RY +R F++++HYRSP
Sbjct: 242 SEGATGEKFVNYWMHNGFVRINEEKMSKSLGNFFTVREVLKRYRSEVVRFFILTSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCIN 367
LNYS LD A+ A+ +Y +L+ + F+ E AR A +D N
Sbjct: 302 LNYSNEHLDEAAVALTRLYTSLRGIDAG--EFEVEADYEARFREAMDDDFN 350
>gi|158521678|ref|YP_001529548.1| cysteinyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
gi|158510504|gb|ABW67471.1| cysteinyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
Length = 479
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/387 (49%), Positives = 250/387 (64%), Gaps = 7/387 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TL IYN +T +KELF P+ GKVGMYVCG T Y H+GHAR+ V FD++ RYL
Sbjct: 1 MTLSIYNVLTGKKELFVPVNPGKVGMYVCGPTVYGPCHIGHARSVVVFDVIARYLRVAGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRNFTDVDDKII RA + G+ ++ +Y E+ DM L T +P+ ++H++
Sbjct: 61 DVTYVRNFTDVDDKIIHRAAEEGKTSEQIAEKYIAEFYRDMDALFVQRATVEPKATEHID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I +I ++N AY GDVFF+VE P YG+LSG++L+ AG R+ VD RKRNP D
Sbjct: 121 DILAVIQILVNKGVAYEAGGDVFFSVEAFPGYGKLSGRKLDQMEAGARIEVDKRKRNPFD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKA K GEPSW+SPWG GRPGWHIEC+AMS+ YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FVLWKAEKPGEPSWESPWGRGRPGWHIECTAMSSRYLGQTFDIHGGGKDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA +W+HNG V N EKMSKSL NF I +I E YHP +R FL+S+HYRS
Sbjct: 241 QSEAAFGREFARFWVHNGFVQINQEKMSKSLNNFKMINEILEAYHPETVRLFLLSSHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+++S + A + +Y L E AL+P E + +PA++ + + F
Sbjct: 301 PIDFSDTSMAEAGAGLDKLYTALGRVE-ALTPSGE-----KPSPASDGDAGEYWNSFCQA 354
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLN 403
M DD NT+ + F+ A + IN L+
Sbjct: 355 MDDDFNTARAVAALFETA-RHINRLLD 380
>gi|336311084|ref|ZP_08566052.1| cysteinyl-tRNA synthetase [Shewanella sp. HN-41]
gi|335865499|gb|EGM70522.1| cysteinyl-tRNA synthetase [Shewanella sp. HN-41]
Length = 459
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/382 (51%), Positives = 249/382 (65%), Gaps = 17/382 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI GK+GMYVCGVT YDL H+GH R VSFD++ RYL ++ EV
Sbjct: 2 LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ +L+ R E D L L P ++PR + H+E+I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHRDFDALNMLRPDFEPRATLHIEEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ +++ AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF
Sbjct: 122 IDMVERLLERGHAYVAADGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDENKQNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y ++D ++ T +PA E +F A M
Sbjct: 302 LNYSEENLKQARAALERLYTAIKDVDL----------TVAADPAEE-----FVAKFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFIN 399
DD NT + F D ++ IN
Sbjct: 347 DDDFNTPEAYSVLF-DMVREIN 367
>gi|334338878|ref|YP_004543858.1| cysteinyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
gi|334090232|gb|AEG58572.1| cysteinyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
Length = 486
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/420 (47%), Positives = 268/420 (63%), Gaps = 5/420 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T+ KE F P G+V MYVCG T Y+ HLG+AR V FD + RY + +V
Sbjct: 1 MEIYNTLTRLKEEFIPGEPGQVKMYVCGPTTYNFIHLGNARPLVFFDTVRRYFMYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y++NFTDVDDKII RA +PL+L+ +Y E+ VD L L P+VS+H+++I
Sbjct: 61 YYIQNFTDVDDKIINRAKKENLDPLALAKKYINEFFVDGDALNVLRADRYPKVSEHIKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++I + AY VEGDV+F+V P YG+LSG+ LE+ +AG RV VD RK++P DFA
Sbjct: 121 INLIKLLQERGHAYEVEGDVYFSVRSFPGYGKLSGRSLEDMQAGARVEVDPRKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK EPSW SPWG GRPGWHIECSAM+ YL S FDIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKAAKPEEPSWQSPWGNGRPGWHIECSAMAGKYLGSGFDIHGGGFDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AAC+ YWMHNG +T N EKMSKSLGNFF +R+I +++ P +R FL+S HYRSPL
Sbjct: 241 EAACKQPFARYWMHNGFITVNQEKMSKSLGNFFLVREILDKFPPDVIRWFLLSTHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++ +L A + I L+ A+ + A + + + LR EF M
Sbjct: 301 DFDDEKLAVAGRGLERIKTALRLLYEAMERPASGEEEAGAGSSFHEKLTLLRLEFEKAMD 360
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ ++ F+ A K IN +N + K + L++ ++ + VKE R+LG+L
Sbjct: 361 DDFNTALAISVFFELA-KEINILVNGMGDKISPEAVLAMEQA----HDLVKEFNRVLGVL 415
>gi|344940190|ref|ZP_08779478.1| cysteinyl-tRNA synthetase [Methylobacter tundripaludum SV96]
gi|344261382|gb|EGW21653.1| cysteinyl-tRNA synthetase [Methylobacter tundripaludum SV96]
Length = 492
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/350 (54%), Positives = 235/350 (67%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T++KE F P V GKVGMYVCG+T YD H+GHAR V FD + RY H E+
Sbjct: 32 LKIYNTLTRKKEPFQPRVAGKVGMYVCGMTVYDYCHIGHARVMVVFDTVARYFRHQGYEL 91
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + GE+ L+ R+ D L LPP +PR + + I
Sbjct: 92 TYVRNITDIDDKIIQRAIENGEDYGKLTERFIDAMHEDERALAVLPPDLEPRATQSIADI 151
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +++ D AYV GDVF+AV K +YGRLSG+ L++ +AGERV VD KRNP DF
Sbjct: 152 ISMIKTLVDKDLAYVGSNGDVFYAVTKFKDYGRLSGKNLDDLQAGERVDVDLAKRNPMDF 211
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKA EP+WDSPWG GRPGWHIECSAMS L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 212 VLWKMAKANEPAWDSPWGLGRPGWHIECSAMSTCCLGNHFDIHGGGMDLQFPHHENEIAQ 271
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMHNG V ++EKMSKSLGNFFT+R++ +Y P +R F++S+HYRSP
Sbjct: 272 SEGATGEKFVNVWMHNGFVRVDDEKMSKSLGNFFTVREVLNQYKPEIIRFFILSSHYRSP 331
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS QL+ A A+ +Y L+ E E R A +D N
Sbjct: 332 LNYSDEQLNDAKAALTRLYTALRGVETTAEAAIEEAYKTRFEQAMDDDFN 381
>gi|218778624|ref|YP_002429942.1| cysteinyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
gi|218760008|gb|ACL02474.1| Cysteinyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
Length = 474
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/391 (49%), Positives = 260/391 (66%), Gaps = 20/391 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN++T+QKE F P+ G V MYVCG T YD SH+GHAR+AV FD+++RYL+
Sbjct: 1 MALTLYNTLTRQKETFKPLKPGHVSMYVCGPTVYDSSHIGHARSAVVFDIVFRYLQESGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRNFTDVDDKII RAN+ + +LS Y E+ DM L L PT +PR ++ ++
Sbjct: 61 EVTYVRNFTDVDDKIINRANERDMDCQALSEIYIDEFHRDMDALAVLRPTLEPRATEFIK 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I ++ ++++ AYVV+GDV+F V +YG+LSG++LE+ AG RV VDSRK++P D
Sbjct: 121 EIIEVTSKLVEKGHAYVVDGDVYFDVRSFESYGKLSGRKLEDMEAGARVKVDSRKKDPFD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA K GEP+W+SPWG GRPGWHIECSAMS L FDIHGGG DLIFPHHENE+A
Sbjct: 181 FALWKAKKPGEPAWESPWGEGRPGWHIECSAMSWSRLGETFDIHGGGQDLIFPHHENEVA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YWMHNG V ++EKMSKSL NF T+++I +++HP A+R FL+S HYRS
Sbjct: 241 QSEAAFGQQFVRYWMHNGFVNIDSEKMSKSLNNFLTVKEILDQFHPEAVRLFLLSKHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALS----PFQEHGKTARINPAAEDCINKLRDE 372
P++++ + A+ + +Y LQ ++ FQ G +R
Sbjct: 301 PVDFTEQAMKEAASGLDRVYSCLQRILESVGGLDDDFQISGHWSR--------------- 345
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLN 403
F A M DD NT+ L G +A++ +N L+
Sbjct: 346 FCACMDDDFNTAGAL-GILFEAVRDVNRLLD 375
>gi|333980492|ref|YP_004518437.1| cysteinyl-tRNA synthetase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823973|gb|AEG16636.1| cysteinyl-tRNA synthetase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 483
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/420 (47%), Positives = 267/420 (63%), Gaps = 11/420 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T++KE F P G+V MYVCG T Y+ HLG+AR V FD + RY ++ V
Sbjct: 1 MEIYNTLTRRKEKFIPRHPGRVDMYVCGPTTYNFIHLGNARPLVFFDTVRRYFQYRGYRV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTD+DDKII RA + G + L+L+ +Y EY D L P PRVS+H+ +I
Sbjct: 61 KYVQNFTDIDDKIINRAREEGVDALALARKYIDEYYRDAEALNVRPADVHPRVSEHLPEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I+ +I AYVV+GDV+F + P YG+LSG+ LE +AG RV VD RK++P DFA
Sbjct: 121 IDLISTLIEKKAAYVVDGDVYFDISAFPEYGKLSGRTLEEMQAGARVEVDPRKKHPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP+WDSPWG GRPGWHIECSAM+ YL + FDIHGGG DL+FPHHENEIAQ+
Sbjct: 181 LWKAAKPGEPAWDSPWGKGRPGWHIECSAMALKYLGNNFDIHGGGFDLVFPHHENEIAQA 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA V YWMHNG +T N EKMSKSLGNFF +R+I +R+ P +R FL+S HYRSPL
Sbjct: 241 EAATGRPFVRYWMHNGFITVNQEKMSKSLGNFFLVREILDRFPPEVVRFFLLSTHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAEDCINKLRD---EFH 374
++ ++ +A + +++ AL P +E I P E+ I L +F
Sbjct: 301 DFDDEKMAAAGRGLERFKNSIRLLTEALDRPSREQ-----IEPEDEEFIAALEKHHRDFV 355
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
A M DD NT+ + G + + + +N+ L+ P + L L + NEV + R+
Sbjct: 356 AAMDDDFNTA-LAVGIWFELAREVNAYLHG-TAGSPCRAALEKAMDLFRSFNEVLGLFRV 413
>gi|57640379|ref|YP_182857.1| cysteinyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
gi|68735029|sp|Q5JD45.1|SYC_PYRKO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|57158703|dbj|BAD84633.1| cysteinyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
Length = 476
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/412 (46%), Positives = 256/412 (62%), Gaps = 3/412 (0%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +KIYN++T+QKE F P+ G+V MYVCG T YD +H+GHAR ++FD++ RYLEH
Sbjct: 1 MGIKIYNTLTRQKEEFKPLREGEVRMYVCGPTVYDYTHIGHARTYIAFDVIRRYLEHKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V V NFTD+DDKII+RAN+ GE+P L+ ++ + +L DM L+ P PRV++H++
Sbjct: 61 TVLMVMNFTDIDDKIIKRANETGEDPKELAEKFLKYFLEDMKALKVKPADIYPRVTEHIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I D I ++ AY V+F V K +YG+LS +LE+ G RV K+NP D
Sbjct: 121 DIIDFIRKLQEKGYAYEGSDGVYFEVRKFKDYGKLSKVKLEDLVKGARVEPGEGKKNPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECS MS YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKKAKPGEPKWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGSDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ A V YWMH G + N EKMSKSLGNF TIR+ ERY P +R F++ HYRS
Sbjct: 241 QTEACTGHEWVRYWMHTGFLMVNGEKMSKSLGNFVTIREALERYDPEVIRLFVLQRHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+Y+ L+ A + + +Y TL++ VA+ + K A + I R +F+
Sbjct: 301 PLDYTEEGLEHAKNNLERLYNTLENIRVAMERAEISFKWGEEEFEAYEAIRDGRKKFYDA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
M DD NT+ L F+ + IN L ++K PK+ L K+ +EV
Sbjct: 361 MDDDFNTAEALKAVFEVS-NAINRYLTQVEK--PKESILRKAWEFFKMVSEV 409
>gi|227824943|ref|ZP_03989775.1| cysteinyl-tRNA synthetase [Acidaminococcus sp. D21]
gi|226905442|gb|EEH91360.1| cysteinyl-tRNA synthetase [Acidaminococcus sp. D21]
Length = 483
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/441 (46%), Positives = 273/441 (61%), Gaps = 21/441 (4%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
T+++YN+MT++KE F P+ GKVG+YVCGVT Y+ H+G+AR V +D+++R+LEH +
Sbjct: 3 TIRVYNTMTRKKEEFVPLHPGKVGIYVCGVTPYNHPHIGNARPFVVWDVIHRFLEHEGYD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VT+V+NFTDVDDKIIR AN G ++NRY + Y M L PRVSDH+
Sbjct: 63 VTHVQNFTDVDDKIIREANKEGVTWDVIANRYIKAYFEVMDKLHVRRAHVYPRVSDHIPD 122
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I + Q+I++ YVV+GDV++ VEK +YG LSG+ L++ AG RV VD RK NP DF
Sbjct: 123 IIHTVQQLIDHGYGYVVDGDVYYRVEKFEHYGELSGRTLDDMMAGARVDVDERKENPMDF 182
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK GEPSWDSPWG GRPGWHIECS MS YL S FD HGGG DLIFPHHENEIAQ
Sbjct: 183 ALWKSAKPGEPSWDSPWGKGRPGWHIECSTMSTKYLGSSFDFHGGGSDLIFPHHENEIAQ 242
Query: 258 S-CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
S A C V YW+HNG +T N EKMSKSLGNFFT+ I + Y P LR+F++ HYRS
Sbjct: 243 SEGATCCHPFVRYWVHNGFITINEEKMSKSLGNFFTVLDILKEYEPEVLRYFILQTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP-----AAEDCINKLRD 371
PL++S +L AS ++L+ A E + P A + ++ +
Sbjct: 303 PLDFSDARLKEAS-------RSLERLRTAAQNLTELKGVISVGPDEDSLALREKVSGFVE 355
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F M DD NTS ++ F + +N+L + Q + + ++ KE+
Sbjct: 356 SFLEAMRDDFNTSLAISYLFA-----LGKEINILHQSVMTGGQKPDGKLVDMMDKAWKEM 410
Query: 432 LRILGLLP--PGAYSE-VKTA 449
I+G+L PGA +E VK A
Sbjct: 411 TSIIGILEEDPGAKTEAVKDA 431
>gi|153871051|ref|ZP_02000318.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
gi|152072482|gb|EDN69681.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
Length = 463
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/392 (48%), Positives = 263/392 (67%), Gaps = 21/392 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L I+NS+T+QK+ FTPI GKV +YVCG+T YD H+GHAR + FD++ RYL L EV
Sbjct: 2 LTIHNSLTKQKDPFTPIEPGKVRLYVCGMTVYDYCHVGHARVMIVFDVVVRYLRSLGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RAN+ GE+ L++R+ Q D L + P +PR + + +I
Sbjct: 62 TYVRNITDIDDKIIQRANENGEDINQLTDRFIQAMYEDTDALNVIRPDIEPRATQSIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +++ + AY+ + GDV +A+++ NYG+LSG+ L++ RAGERV V+ K++P DF
Sbjct: 122 VAMIQSLLDKNYAYLTDNGDVCYAIQRFENYGQLSGKHLDDLRAGERVEVNESKQHPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEPSW+SPWG GRPGWHIECSAMS H L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKTAKPGEPSWESPWGAGRPGWHIECSAMSTHCLGNHFDIHGGGMDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A ++ V+ WMHNG V N+EKMSKSL NFFT+R++ ERY P +R+F++++HYRS
Sbjct: 242 SEGATGETFVNVWMHNGFVRINDEKMSKSLNNFFTVREVLERYQPEVVRYFILTSHYRSE 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS +L++A ++ +Y ++D P + P +D N+ F M
Sbjct: 302 LNYSEQELEAAKQSITRLYIAIRDL-----PNTDE-------PCPDDSYNQ---RFLTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQ 409
+DD NT L F ++ +N+L++K+
Sbjct: 347 NDDFNTPEALAALFS-----LSKEINILRRKK 373
>gi|338813808|ref|ZP_08625892.1| cysteinyl-tRNA synthetase [Acetonema longum DSM 6540]
gi|337274202|gb|EGO62755.1| cysteinyl-tRNA synthetase [Acetonema longum DSM 6540]
Length = 480
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/424 (46%), Positives = 273/424 (64%), Gaps = 9/424 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TLK+YN++T++K F P GKV MYVCGVT Y+ H+G+AR V++D++ RY EHL
Sbjct: 1 MTLKVYNTLTKKKGKFVPSEPGKVKMYVCGVTPYNHPHIGNARPFVTWDVIRRYFEHLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V +V+NFTDVDDKII AN + ++NRY Y M L+ T PRVS+HM
Sbjct: 61 QVYHVQNFTDVDDKIINAANAEQVSWDVIANRYIASYFEVMDPLRIRRATVYPRVSEHMP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
QI DM+ +IN AY+ +GDV+++VEK +YG+LSG+ L++ +AG RV VD RKR+P D
Sbjct: 121 QIIDMVQTLINKGYAYLADGDVYYSVEKFHDYGKLSGRSLDDMKAGARVEVDERKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+ K GEPSWDSPWGPGRPGWHIECSAMS HYL FD HGGG DLIFPHHENEIA
Sbjct: 181 FALWKSVKPGEPSWDSPWGPGRPGWHIECSAMSFHYLGKSFDFHGGGSDLIFPHHENEIA 240
Query: 257 QSCA--ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
QS A C++ V YW+HNG +T N EKMSKSLGNFF ++ I + P LR F++S HY
Sbjct: 241 QSEAFCGCEEPCVHYWLHNGFITVNEEKMSKSLGNFFLVKDILTHFSPEVLRFFIVSTHY 300
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
RSPL++S +L A ++ + +T Q+ L+ G + + + + + EF+
Sbjct: 301 RSPLDFSDERLAEAGRSLERL-KTAQENLKYLATLPA-GAASEGSHTLTEAAQRAKTEFY 358
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT+ + + F + +N+ + + S +++ ++ E +K +
Sbjct: 359 EAMDDDFNTALVTSVMFG-----LAKEINIYHHEVVNGRVGSDLQACKEAEQALKVMADT 413
Query: 435 LGLL 438
LG+L
Sbjct: 414 LGVL 417
>gi|240103606|ref|YP_002959915.1| cysteinyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
gi|259511844|sp|C5A739.1|SYC_THEGJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|239911160|gb|ACS34051.1| Cysteinyl-tRNA synthetase (cysS) [Thermococcus gammatolerans EJ3]
Length = 476
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/422 (46%), Positives = 261/422 (61%), Gaps = 9/422 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ ++IYN++T+QKE F P+ G+V MYVCG T YD HLGHAR ++FD++ RYLEH
Sbjct: 1 MAIRIYNTLTRQKEEFKPLHEGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V V NFTD+DDKII+RAN+ GE+P L+ ++ + +L DM L+ P PRV++HM+
Sbjct: 61 TVLMVMNFTDIDDKIIKRANETGEDPKELAEKFLRIFLEDMKALKVKPADIYPRVTEHMQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I I ++ AY V+F V K +YG+LS +LE+ G RV KRNP D
Sbjct: 121 DIISFIKKLQEKGYAYEGSDGVYFEVRKFKDYGKLSKIKLEDLVKGARVEPGEGKRNPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKKAKPGEPKWESPWGEGRPGWHIECSTMSSKYLGESFDIHGGGNDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V YWMH G + N EKMSKSLGNF T+R++ +RY+P +R F++ HYRS
Sbjct: 241 QSEACFGHEWVHYWMHTGFLMVNGEKMSKSLGNFVTVRELLKRYNPEVIRLFVLQRHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+YS ++ A + + +Y TL++ VA+S + + A + I R +F+
Sbjct: 301 PLDYSEEGIEHAKNNLERLYNTLENIRVAMSKAEISFRWDEPEFRAYEAIRDARKKFYEA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ L F+ + IN L ++K PK+ LRK K+V + G
Sbjct: 361 MDDDFNTAEALKAVFEVS-NAINRYLTEVEK--PKES------ILRKAWEFFKDVGEVFG 411
Query: 437 LL 438
L
Sbjct: 412 LF 413
>gi|386392194|ref|ZP_10076975.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. U5L]
gi|385733072|gb|EIG53270.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. U5L]
Length = 485
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/421 (47%), Positives = 261/421 (61%), Gaps = 8/421 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++++N+M + KE F + GKV MYVCG+TAYDL H+GHAR++V FD+L RYL HL EV
Sbjct: 1 MQLFNTMARGKEPFVSRLPGKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHLGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII++AN G ++ RY + DM L L +PR ++++ ++
Sbjct: 61 TFVRNFTDVDDKIIKKANSEGATSAEIAERYIAAFYEDMDRLGILRADAEPRATEYIAEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM ++I N AY GDV+F V YG+LSG+ +E+ R+G RVA K +P DF
Sbjct: 121 ADMAARLIENGHAYRTPSGDVYFRVRSFAGYGKLSGRDVEDMRSGARVAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKA+K GEP WDSP+GPGRPGWH+ECS MS L DIHGGG DLIFPHHENEIAQ
Sbjct: 181 ALWKASKPGEPVWDSPFGPGRPGWHLECSVMSEKLLGIPIDIHGGGQDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + +W+HNG V N EKMSKSLGNF TIR I +RY P LR FL+S+HYRSP
Sbjct: 241 SEAATGNDFCRFWVHNGFVRINTEKMSKSLGNFVTIRDIYKRYLPEVLRFFLVSSHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS LD A + IY E AL+ + R+ P + KL + F A M
Sbjct: 301 LDYSDQALDEAEKGIKRIYAAKGQMEQALA--RAKWSETRLPPEIGQELAKLEEGFTAAM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DDLNT+ + F + + +L K + + E+LR+I ++ ILG+
Sbjct: 359 DDDLNTAQAIGHVF----GLVRLAGRVLDDKTLAKSR-EAAEALRRILADLDTWSGILGV 413
Query: 438 L 438
Sbjct: 414 F 414
>gi|88811742|ref|ZP_01126996.1| cysteinyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
gi|88791133|gb|EAR22246.1| cysteinyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
Length = 469
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/407 (49%), Positives = 257/407 (63%), Gaps = 22/407 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYNS+T +KE F PI G+V MYVCG+T YD HLGHARA V FD + RYL V
Sbjct: 2 LYIYNSLTNRKEPFRPIEPGRVRMYVCGMTVYDYCHLGHARAMVVFDTVVRYLRSAGYRV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA +LGE L+ R+ D A L CL P +PR + +M+ I
Sbjct: 62 DYVRNITDVDDKIIRRAAELGEPVNVLTERFIAAMHADTAALGCLLPDAEPRATAYMDAI 121
Query: 139 KDMITQIINNDCAY--VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I ++++ AY V EG +++AVE+ YGRLSG+RLE RAG RV + KR+ AD
Sbjct: 122 VALIQRLLDRGYAYQAVDEGSIYYAVERFEGYGRLSGERLEALRAGARVEPGAGKRDAAD 181
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GEPSW +PWG GRPGWHIECSAM+ L FDIHGGG+DL FPHHENEIA
Sbjct: 182 FVLWKAAKPGEPSWPAPWGEGRPGWHIECSAMAGACLGQHFDIHGGGLDLKFPHHENEIA 241
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V++WMHNGH+ N+EKMSKSLGNFFT+R++ + Y +R+FL+S+HYRS
Sbjct: 242 QSEAAWGGRYVNFWMHNGHIRINDEKMSKSLGNFFTVREVLQVYRAEEIRYFLLSSHYRS 301
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PLNYS LD++ A+ +Y L+D PF E A+ R+ F
Sbjct: 302 PLNYSTSDLDNSRAALERLYLALRDL-----PFTE---------ASPALAAPYREAFRQA 347
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
M DD NT L F D + IN ++ + + Q +L +LR+
Sbjct: 348 MDDDFNTPLALAVLF-DLAREINR-----RRDRFESQAAALAATLRE 388
>gi|78485268|ref|YP_391193.1| cysteinyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
gi|109894958|sp|Q31H54.1|SYC_THICR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|78363554|gb|ABB41519.1| cysteinyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
Length = 456
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/433 (47%), Positives = 272/433 (62%), Gaps = 35/433 (8%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LKIYN+ T+QKE FTPI KVG+YVCGVT YD H+GHAR V FD + R+L L
Sbjct: 1 MALKIYNTETRQKETFTPIQPNKVGLYVCGVTVYDYCHVGHARVMVVFDTVVRHLRSLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN TD+DDKII+RA + E+ SL++R+ D L L P +P+ +++M+
Sbjct: 61 DVTYVRNITDIDDKIIQRALENKESIQSLTSRFIDAMHEDEKALNVLRPDMEPKATEYMD 120
Query: 137 QIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+I+ MI+ +I D AY E GDV+F V+ +YGRLSG+ +E +G RV ++S K++P
Sbjct: 121 EIETMISTLIEKDFAYPAENGDVYFHVKADDDYGRLSGKNIEELDSGSRVEINSVKKDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWKA+K EP+W SPWG GRPGWHIECSAMS L + FDIHGGG+DL FPHHENEI
Sbjct: 181 DFVLWKASKENEPAWQSPWGDGRPGWHIECSAMSTKCLGNHFDIHGGGLDLSFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A + V+ WMH G V ++EKMSKSLGNFFTIR++ ++YHP +R+FL+++HYR
Sbjct: 241 AQSECATGEHYVNSWMHCGFVRIDDEKMSKSLGNFFTIREVLKQYHPEVIRYFLLASHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SP+NYS LD A +V +Y L+ L P + AE +KL EF A
Sbjct: 301 SPVNYSEENLDVAKASVGRLYSALE-----LVPADQ----------AEPAESKLEAEFMA 345
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F+ L K+ KQ+ L L+K+ N++
Sbjct: 346 AMNDDFNTPQAMAVLFE------------LAKEVNKQKSPGLAALLKKLANQI------- 386
Query: 436 GLLPPGAYSEVKT 448
GLL A S K+
Sbjct: 387 GLLEQTAESFFKS 399
>gi|46579990|ref|YP_010798.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str.
Hildenborough]
gi|387153567|ref|YP_005702503.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
gi|61216247|sp|Q72BQ5.1|SYC_DESVH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|46449406|gb|AAS96057.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234011|gb|ADP86865.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
Length = 485
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/431 (46%), Positives = 269/431 (62%), Gaps = 7/431 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYNS++++KELFTP V GKV MYVCG+TAYDL H+GHAR+AV FD+L RYL H +V
Sbjct: 1 MQIYNSLSRRKELFTPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+ RNFTDVDDKII+RAN+ G ++ +Y + DM L L +P+ + H+ ++
Sbjct: 61 TFARNFTDVDDKIIKRANEEGLTSQQVAEKYIDTFYEDMDRLNVLRADIEPKATGHILEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I AY GDV+F V P YG+LSG+ +++ R+G RVA K +P DF
Sbjct: 121 IALCEKLIAKGKAYATPSGDVYFRVRSFPEYGKLSGRDIDDMRSGARVAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSW SPWG GRPGWHIECSAMS ++ DIHGGG DLIFPHHENEIAQ
Sbjct: 181 ALWKAAKPGEPSWTSPWGEGRPGWHIECSAMSEKHMPLPLDIHGGGQDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AA V YWMHNG V + EKMSKSLGNF TIR I E Y P LR FL++ HYRSP
Sbjct: 241 TEAALDKPFVRYWMHNGFVQVDAEKMSKSLGNFKTIRDILEGYLPEVLRFFLLTKHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEFHAR 376
++++ +D A ++ IY+ L S + + AE D +++ DE
Sbjct: 301 IDFTFDSMDEAEKSLKRIYEALSLARTERSRSKWSATPLPADVTAEFDTLDRAFDE---A 357
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
+ DDLNT+ L F ++ +N L K + + L+L+E L + + +VL + G
Sbjct: 358 LEDDLNTAAALGHVFG-TIRLVNRLLED-KNLRKSAETLALLERLDGLVAKWMKVLGVFG 415
Query: 437 LLPPGAYSEVK 447
P S++K
Sbjct: 416 REPEAFLSDLK 426
>gi|30248074|ref|NP_840144.1| cysteinyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
gi|61216300|sp|Q82Y45.1|SYC_NITEU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|30179959|emb|CAD83954.1| Cysteinyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
Length = 465
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/380 (51%), Positives = 252/380 (66%), Gaps = 20/380 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIY+++T+ + F P+ G+V MYVCG+T YD HLGHAR V FD + R+L+ L +V
Sbjct: 2 LKIYDTLTRSRREFIPLTPGEVRMYVCGMTVYDYCHLGHARVLVVFDSVVRWLQTLGYKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + E +L+ RY Q D L + P+++PR +++++ +
Sbjct: 62 IYVRNITDVDDKIIRRALENHEPFSALTARYIQAMEEDAMALGVISPSFEPRATEYVDSM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++N + AYV GDVF+ V + P YG+LSG+ L++ RAGERV +D+ KR+P DF
Sbjct: 122 IAMIESLLNRELAYVASNGDVFYDVRRFPGYGKLSGKSLDDLRAGERVEIDTNKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EPSWDSPWG GRPGWHIECSAMS HYL +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPDEPSWDSPWGKGRPGWHIECSAMSEHYLGDQFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S S+V+YWMHNG V +NEKMSKSLGNFFT+R++ RY P +R F++ AHYRSP
Sbjct: 242 SEGVHGHSHVNYWMHNGFVRVDNEKMSKSLGNFFTVREVLTRYQPEVVRFFIVRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTL------QDCEVALSPFQEHGKTARINPAAEDCINKLRD 371
LNYS L+ A A+ +Y L QD EVA TA I+ E+ + R
Sbjct: 302 LNYSDAHLNDARSALERLYTVLKNHAPSQDSEVA---------TAVID--WENNVYARR- 349
Query: 372 EFHARMSDDLNTSHILTGAF 391
F + M+DD NT + F
Sbjct: 350 -FMSAMNDDFNTPEAVAVLF 368
>gi|127513439|ref|YP_001094636.1| cysteinyl-tRNA synthetase [Shewanella loihica PV-4]
gi|187631636|sp|A3QFX9.1|SYC_SHELP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|126638734|gb|ABO24377.1| cysteinyl-tRNA synthetase [Shewanella loihica PV-4]
Length = 459
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/426 (46%), Positives = 262/426 (61%), Gaps = 17/426 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YNS+T+QKE F PI GKVGMYVCGVT YDL H+GH R V+FD++ RYL ++ +V
Sbjct: 2 LKLYNSLTRQKEEFKPIQPGKVGMYVCGVTIYDLCHIGHGRTFVAFDMIVRYLRYIGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RA + GE+ +L+ R QE D L P ++PR + HM +I
Sbjct: 62 NFHRNITDVDDKIIKRATENGESCDALTERLTQEMYHDFDALNMKRPDFEPRATQHMPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ +++ D AY+ + GDV F+V P YGRLSGQ L+ +AG RV VD KR+P DF
Sbjct: 122 IEMVERLLERDHAYIADNGDVLFSVASFPEYGRLSGQNLDQLQAGARVEVDENKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLAHYDASTVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQ--DCEVALSPFQEHGKTARINPAAEDCINK------- 368
LNYS L A A+ +Y L+ D V +P E+ A+ A +D N
Sbjct: 302 LNYSEDNLKQAKAALERLYTALKGLDLSVEAAPASEY--VAKFKEAMDDDFNTPEAYSVL 359
Query: 369 --LRDEFHARMSDDLNTSHILTGAFQ---DALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+ E + DDL + L + + D L + ++ K + +++ IE+L
Sbjct: 360 FDMAREINRLKVDDLAAASALGVSMKQLGDVLGILEQDVDGFFKGEGSDDEVAQIEALIA 419
Query: 424 IENEVK 429
N +
Sbjct: 420 ERNRAR 425
>gi|444913172|ref|ZP_21233326.1| Cysteinyl-tRNA synthetase [Cystobacter fuscus DSM 2262]
gi|444716175|gb|ELW57030.1| Cysteinyl-tRNA synthetase [Cystobacter fuscus DSM 2262]
Length = 488
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/424 (45%), Positives = 262/424 (61%), Gaps = 17/424 (4%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+++++N+MT QKE P+V GK+G+YVCG T Y H+G+AR SFD++ RYL H E
Sbjct: 5 SIRLFNTMTMQKETLVPVVPGKLGVYVCGPTVYSYVHIGNARTFTSFDVVVRYLRHRGFE 64
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN+TDVDDKII+ A + GE P++L+ R+ + + D L L P P+VSDH+ +
Sbjct: 65 VTYVRNYTDVDDKIIKAAQETGEAPVALAARFVEAFREDARALHLLEPDVSPKVSDHIPE 124
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I +I ++++ AY +GDV+F+V + P+Y +LS + L+ GERV +K P DF
Sbjct: 125 ILRIIGKLVDKGVAYASQGDVYFSVRRYPDYAKLSKRDLDELCVGERVQPGEQKHEPLDF 184
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSWDSPWGPGRPGWHIECSAMS YL FDIHGGG+DLIFPHHENE+AQ
Sbjct: 185 ALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSERYLGETFDIHGGGLDLIFPHHENELAQ 244
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + YWMH G + KMSKSLGN +R+ ER ALR F +S HYR P
Sbjct: 245 SEAASGHTLARYWMHCGFLDLEGAKMSKSLGNVVRLREALERVDAEALRFFFLSTHYRHP 304
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L +S L A + Y Y+TL+ + + GK P D + D F A+M
Sbjct: 305 LAFSDKGLADAELRMEYFYETLRKVDERVG-----GKEFAPGPLHGDAARFMAD-FEAQM 358
Query: 378 SDDLNTS---HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
DD N++ +L+G F + +N L K P + + + +LR + +V++V I
Sbjct: 359 DDDFNSAGALGVLSGLF--------AMMNELVDKPPVKDKAVVGRTLRALREDVRKVSGI 410
Query: 435 LGLL 438
LGL
Sbjct: 411 LGLF 414
>gi|357633334|ref|ZP_09131212.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
gi|357581888|gb|EHJ47221.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
Length = 485
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/374 (50%), Positives = 241/374 (64%), Gaps = 3/374 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++++N+M + KE F + GKV MYVCG+TAYDL H+GHAR++V FD+L RYL HL EV
Sbjct: 1 MQLFNTMARGKEPFVSRLPGKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHLGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII++AN G ++ RY + DM L L +PR ++++ ++
Sbjct: 61 TFVRNFTDVDDKIIKKANSEGATSAEIAERYIAAFYEDMDRLGILRADAEPRATEYIAEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM ++I N AY GDV+F V YG+LSG+ +E+ R+G RVA K +P DF
Sbjct: 121 ADMAARLIENGHAYRTPSGDVYFRVRSFDGYGKLSGRDVEDMRSGARVAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKA+K GEP WDSP+GPGRPGWH+ECS MS L DIHGGG DLIFPHHENEIAQ
Sbjct: 181 ALWKASKPGEPVWDSPFGPGRPGWHLECSVMSEKLLGIPIDIHGGGQDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +W+HNG V N EKMSKSLGNF TIR I ERY P LR FL+S+HYRSP
Sbjct: 241 SEAATGSDFCRFWVHNGFVRINTEKMSKSLGNFVTIRTIYERYLPEVLRFFLVSSHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS LD A + IY E AL+ + ++ P +NKL + F M
Sbjct: 301 LDYSDQALDEAEKGIKRIYAAKGQMEQALT--RAKWSETKLPPEIGQELNKLEEGFTGAM 358
Query: 378 SDDLNTSHILTGAF 391
DDLNT+ + F
Sbjct: 359 DDDLNTAQAIGHVF 372
>gi|392407156|ref|YP_006443764.1| cysteinyl-tRNA synthetase [Anaerobaculum mobile DSM 13181]
gi|390620292|gb|AFM21439.1| cysteinyl-tRNA synthetase [Anaerobaculum mobile DSM 13181]
Length = 474
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/422 (46%), Positives = 268/422 (63%), Gaps = 11/422 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN +T++K+ F P+ +GKVG YVCG T YD H+G+AR V FD L RY+EH
Sbjct: 1 MGLMLYNDLTRRKDEFIPLHQGKVGFYVCGPTVYDYIHIGNARPFVVFDTLRRYMEHKGF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV+NFTD+DDK+I +AN+LG L+ R+ + Y D+ L T P ++H++
Sbjct: 61 EVVYVQNFTDIDDKMINKANELGITVKELAERFIKAYFEDVTPLGVRHATVHPLATEHID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I +I++I+ AYVVEG+V+F V+ P YG+LSGQ LE +AG R+ VD+RK++P D
Sbjct: 121 EIIALISRIMERGHAYVVEGNVYFDVKSFPGYGKLSGQGLEELQAGARIEVDARKKHPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKA K GEP WDSPWGPGRPGWHIECSAM+ YL DIHGGG DLIFPHHENEIA
Sbjct: 181 FVLWKARKPGEPWWDSPWGPGRPGWHIECSAMAMKYLGETIDIHGGGSDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YW+HNG++ N EKMSKSLGN T R++ +Y PLA+R F++ AHYRS
Sbjct: 241 QSEAATGKQFVRYWIHNGYLLINKEKMSKSLGNILTARELIGKYQPLAVRLFILGAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI-NPAAEDCINKLRDEFHA 375
PL++S L A ++ Q L++C L + E + + +D I K +F
Sbjct: 301 PLDFSEESLTQAVRSM----QRLRNCYSDLIFYMERSEEKDTPDTWLDDVIRKGYIKFCE 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+ DD NT+ L F+ I LN K + +LI + +K + V+E++ ++
Sbjct: 357 ALDDDFNTAGALGSVFE-----IVRDLNNYLKDSASLDKNALINA-KKFFDAVEEIMGVI 410
Query: 436 GL 437
G+
Sbjct: 411 GI 412
>gi|82703002|ref|YP_412568.1| cysteinyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
gi|109894912|sp|Q2Y7U5.1|SYC_NITMU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|82411067|gb|ABB75176.1| cysteinyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
Length = 464
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/385 (49%), Positives = 245/385 (63%), Gaps = 14/385 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+NS+ ++K+ F P+ GKV +YVCG+T YD HLGHAR V FD++ R+ + +V
Sbjct: 2 LKIHNSLAREKQEFIPLTPGKVKVYVCGMTVYDYCHLGHARVMVVFDMVQRWFRANRFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + E+ +L+ R+ Q D A L PP+++PR + H+E +
Sbjct: 62 TYVRNITDIDDKIIRRAQENKESIEALTARFIQAMEEDAAALGVEPPSWEPRATRHVEDM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +++ AY GDV++AV + P YG+LSG+ L+ RAGERV VD K +P DF
Sbjct: 122 IAMIQVLVDKKLAYPASNGDVYYAVHRFPGYGKLSGKSLDELRAGERVIVDPHKNDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP WDSPWGPGRPGWHIECSAM HYL FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPQWDSPWGPGRPGWHIECSAMGEHYLGEHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMHNG V N+EKMSKSLGNFFT+R+I + P +R F++ AHYRSP
Sbjct: 242 SEGAHGHPFVNYWMHNGFVRVNDEKMSKSLGNFFTVREILAHFQPEVVRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ +QL+ A A+ +Y L+ EV + D + F M
Sbjct: 302 LNYADMQLEDAGRALDRLYTALKGIEVH-------------DEVEIDWDDPYASRFREAM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSSL 402
+DD NT L F A + + L
Sbjct: 349 NDDFNTPEALAVLFDLATEVNKTRL 373
>gi|119774358|ref|YP_927098.1| cysteinyl-tRNA synthetase [Shewanella amazonensis SB2B]
gi|187631632|sp|A1S4X2.1|SYC_SHEAM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|119766858|gb|ABL99428.1| cysteinyl-tRNA synthetase [Shewanella amazonensis SB2B]
Length = 459
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/422 (48%), Positives = 260/422 (61%), Gaps = 26/422 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+++QKE F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL + EV
Sbjct: 2 LKIYNSISRQKEEFKPIQPGKIGMYVCGVTIYDLCHIGHGRTFVCFDMIVRYLRYRGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y RN TDVDDKII+RAN+ GE+ SL+ R E D L + P+++PR + H+++I
Sbjct: 62 NYQRNITDVDDKIIKRANENGESCDSLTERLIGEMHADFDALNMVRPSFEPRATLHIDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+T++++ AYV +GDV F V YGRLSGQ LE +AG RV VD KRNP DF
Sbjct: 122 IDMVTRLLDRGHAYVAADGDVLFDVSSYAAYGRLSGQDLEQLQAGARVEVDENKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNTWMHTGMVMVDREKMSKSLGNFFTIRDVLAHYDAQTVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ ++ + A++ +++ F A M
Sbjct: 302 LNYSEDNLKQARASLERMYTALKGLDLTVEA-----------AGADEFVSR----FMAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN + K ++ L E+ EVL IL
Sbjct: 347 DDDFNTPEAYSVLF-DMVREIN---------RLKTSDMAAASQLGVALKELAEVLGILSS 396
Query: 438 LP 439
P
Sbjct: 397 TP 398
>gi|160874741|ref|YP_001554057.1| cysteinyl-tRNA synthetase [Shewanella baltica OS195]
gi|378707994|ref|YP_005272888.1| cysteinyl-tRNA synthetase [Shewanella baltica OS678]
gi|418023622|ref|ZP_12662607.1| cysteinyl-tRNA synthetase [Shewanella baltica OS625]
gi|187631635|sp|A9KWH4.1|SYC_SHEB9 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|160860263|gb|ABX48797.1| cysteinyl-tRNA synthetase [Shewanella baltica OS195]
gi|315266983|gb|ADT93836.1| cysteinyl-tRNA synthetase [Shewanella baltica OS678]
gi|353537505|gb|EHC07062.1| cysteinyl-tRNA synthetase [Shewanella baltica OS625]
Length = 459
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/423 (48%), Positives = 262/423 (61%), Gaps = 33/423 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI GK+GMYVCGVT YDL H+GH R VSFD++ RYL + EV
Sbjct: 2 LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ +L+ R E D L L P ++PR + H+ +I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++ AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF
Sbjct: 122 IDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDETKQNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCE--VALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
LNYS L A A+ +Y ++D + VA +P AE+ I K F A
Sbjct: 302 LNYSEDNLKQARSALERLYTAIKDVDLTVAAAP-------------AEEFIAK----FKA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT + F D ++ IN L + Q ++L K++ +L
Sbjct: 345 AMDDDFNTPEAYSVLF-DMVREIN-RLKLTDMAQASALAVTL-----------KQLADVL 391
Query: 436 GLL 438
GLL
Sbjct: 392 GLL 394
>gi|253702469|ref|YP_003023658.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
gi|259511834|sp|C6E7P0.1|SYC_GEOSM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|251777319|gb|ACT19900.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
Length = 480
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/421 (47%), Positives = 262/421 (62%), Gaps = 13/421 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L++YN++T KE F PI GKVGMYVCGVT YD H+GHARA V FD++YR+L
Sbjct: 1 MPLRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRHLLSKGL 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRN+TD+DDKII RAN G +S R+ +E+ DMA L PT+QP+ ++H+
Sbjct: 61 EVTYVRNYTDIDDKIINRANRDGVAYNEISERFIKEFDNDMARLMLQLPTFQPKATEHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I +++ ++I+ AY DVF+ V++ Y +LS + LE+ +AG R+ VD RK +P D
Sbjct: 121 EIINLVQKLIDKGFAYQSGSDVFYRVDRFEGYLKLSKRNLEDMQAGARIDVDERKEHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECSAMS +L DIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKGAKPGEPYWESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YW+HNG V N+EKMSKSLGNFFTI++I E Y LR FL+SAHYRS
Sbjct: 241 QSEAASGKPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEILESYDAEVLRFFLLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+++S L A + IY+ L + L+ H N + + F
Sbjct: 301 PIDFSDQNLKEAELGLERIYKALAGIDERLAS-GAHTPADADNTEFAEKVAGFAGRFGDA 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ L G D ++ IN L L+E K++ EV ++ +LG
Sbjct: 360 MDDDFNTALAL-GHLFDLVRVINREL--------PTASTGLLE---KVKAEVAKMAAVLG 407
Query: 437 L 437
+
Sbjct: 408 I 408
>gi|357039770|ref|ZP_09101562.1| cysteinyl-tRNA synthetase [Desulfotomaculum gibsoniae DSM 7213]
gi|355357576|gb|EHG05349.1| cysteinyl-tRNA synthetase [Desulfotomaculum gibsoniae DSM 7213]
Length = 485
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/427 (45%), Positives = 266/427 (62%), Gaps = 6/427 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T++KE P GKV +YVCG T Y+ HLG+AR V FD + RYL++ V
Sbjct: 1 MRIYNTLTKKKEELIPREPGKVAIYVCGPTTYNYIHLGNARPIVVFDTVRRYLKYKGFNV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTD+DDKII RA + G++ +L+ RY EY D L L P+VS H+ +I
Sbjct: 61 LYVQNFTDIDDKIINRAREEGDDHQALAERYINEYFKDADALNVLRADIYPKVSGHITEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ ++ AY+V+GDV++ V K YG+LSG+ LE+ +AG RV +D+RK +P DFA
Sbjct: 121 IKLVETLVEKGFAYLVDGDVYYNVRKFAGYGKLSGRTLEDMQAGARVEIDTRKNDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEP+WDSPWG GRPGWHIECSAM+ YL FDIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKSAKPGEPAWDSPWGKGRPGWHIECSAMALKYLGVNFDIHGGGFDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA YWMHNG +T N EKMSKSLGNFF +R I + P +R +L+ HYRSPL
Sbjct: 241 EAATGQPFARYWMHNGFITVNQEKMSKSLGNFFLVRDILSEFSPEVVRFYLLGTHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++ +L +A + I +L+ + AL+ ++ G R +PA + ++R EF M
Sbjct: 301 DFDDEKLTAAQKGLERIKTSLRLLDEALAG-RQAGSAERPDPALAVRLEEIRIEFEKAMD 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ + TG + + +NS L P ++ I +L+K + +LG+
Sbjct: 360 DDFNTA-LATGMLFNLAREVNSYLQRSDFPSPAEK----IAALQKARQVFLQFNSVLGVF 414
Query: 439 PPGAYSE 445
A E
Sbjct: 415 KTSARGE 421
>gi|319790489|ref|YP_004152122.1| cysteinyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
gi|317114991|gb|ADU97481.1| cysteinyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
Length = 472
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/417 (46%), Positives = 265/417 (63%), Gaps = 17/417 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+ N++T++KE F P+ V MYVCG T YD +H+GHAR+AV FD++ R+LE+ V
Sbjct: 2 IKVTNTLTERKEEFKPLEGKTVKMYVCGPTVYDHAHIGHARSAVVFDVIRRWLEYRGYRV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+VRN+TDVDDKII+R+ + G +S +Y Y DM L PTY+P+V++H+ +I
Sbjct: 62 IFVRNYTDVDDKIIKRSKEEGIPWYEVSKKYIASYEEDMEALNVKEPTYKPKVTEHIREI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+MI +I AY +GDV+F+VE P YG+LS ++ E AG RV +K+NP DFA
Sbjct: 122 IEMIDGLIQKGHAYEADGDVYFSVESFPEYGKLSKRKTEELLAGARVEPGEKKKNPLDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK +K GEP W+SPWG GRPGWHIECSAMS YL DIHGGG DLIFPHHENEIAQS
Sbjct: 182 LWKKSKEGEPGWESPWGVGRPGWHIECSAMSMKYLGETIDIHGGGFDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+ + YW+HNG V N EKMSKSLGNFFTI++I +++ P LR FL+S HYRSP+
Sbjct: 242 ESYTGKTFARYWIHNGFVMVNREKMSKSLGNFFTIKEILKQFSPDTLRLFLLSTHYRSPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
+++V +L A A+ + ++ + +E K I+ + R EF A M
Sbjct: 302 DFTVERLKEAERALKRLTTFIESVKAVEKLPEEGEKGEPID------VESARREFEAAMD 355
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL------SLIESLRKIENEVK 429
DD NT+ L GA + +K N+ LK K K+Q++ SL+++ R EN +K
Sbjct: 356 DDFNTAKAL-GALYELVKRANT----LKDKALKRQKITPSERESLVDAARFTENALK 407
>gi|91774855|ref|YP_544611.1| cysteinyl-tRNA synthetase [Methylobacillus flagellatus KT]
gi|122985612|sp|Q1H417.1|SYC_METFK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91708842|gb|ABE48770.1| cysteinyl-tRNA synthetase [Methylobacillus flagellatus KT]
Length = 455
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/327 (56%), Positives = 232/327 (70%), Gaps = 1/327 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ + K+ F+PI+ GKV MYVCG+T YD HLGHAR V FD++ R+L EV
Sbjct: 2 LKIYNTLARAKQTFSPIIPGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRSSGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RAN+ GE +L++R+ D A L P +PR +D++ ++
Sbjct: 62 TYVRNITDIDDKIIARANENGETINALTDRFIAAMNEDAARLGVWRPDLEPRATDYIHEM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I AY + GDV++AV +YG+LSG+ LE+ RAGERV VD+ KR+P DF
Sbjct: 122 IAMIVALIEKHHAYAADNGDVYYAVSSFASYGKLSGKSLEDLRAGERVEVDAHKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEPSWDSPWGPGRPGWHIECSAM A +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPSWDSPWGPGRPGWHIECSAMGARHLGPHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMHNG + ++EKMSKSLGNFFTIR++ E+Y +R F++ AHYRSP
Sbjct: 242 SEGAHGCTFVNYWMHNGFIRVDDEKMSKSLGNFFTIREVLEKYDAEVVRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEV 344
LNYS LD A A+ +Y TL+ E+
Sbjct: 302 LNYSSHHLDDAKQALTRLYNTLRGREL 328
>gi|14521604|ref|NP_127080.1| cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|13878786|sp|Q9UYV2.1|SYC_PYRAB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|5458823|emb|CAB50310.1| cysS cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|380742214|tpe|CCE70848.1| TPA: cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
Length = 477
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/414 (45%), Positives = 261/414 (63%), Gaps = 7/414 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +K+YN++T++KE P+ G+V MYVCG T YD HLGHAR ++FD++ RYLEH
Sbjct: 1 MGIKVYNTLTRKKEELKPLRDGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHRGF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V V NFTD+DDKII+RA + GE+P L+ R+ + +L DM L+ P PRV++H++
Sbjct: 61 TVLMVMNFTDIDDKIIKRAQETGEDPGKLAERFIKVFLEDMNALKVKPADIYPRVTEHID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I ++ AY V+F V+K +YG+LSG ++E R G RV K+NP D
Sbjct: 121 DIIEFIKKLKEKGYAYEGSDGVYFEVQKFKDYGKLSGVKIEELRKGARVEPGEGKKNPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP WDSPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V YW+H G V EKMSKSLGNF T+R++ +RY P +R F++ HYRS
Sbjct: 241 QSEACFGHEWVRYWLHTGFVMVKGEKMSKSLGNFVTVRELLQRYSPEVIRLFVLQKHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+Y+ L A + + +Y TL++ +A+ + K + + A + I + R +F+
Sbjct: 301 PLDYTEEGLQHAKNNLERLYNTLENIRIAMRNAELSYKWSEKDFEAYEAIREARKKFYDA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLN--MLKKKQPKQQQLSLIESLRKIENEV 428
M DD NT+ L F+ +++++N +L+ +PK+ L K+ +EV
Sbjct: 361 MDDDFNTAEALKAVFE-----VSNAINKYILEVDKPKESILRKALEFFKVVSEV 409
>gi|262199957|ref|YP_003271166.1| cysteinyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
gi|262083304|gb|ACY19273.1| cysteinyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
Length = 495
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/430 (47%), Positives = 275/430 (63%), Gaps = 20/430 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++Y+S+ ++K F P+ GK +Y+CG T Y +HLGHA +A+ FD++ R L L EV
Sbjct: 4 IRLYDSIRREKVDFEPLQPGKASIYLCGPTPYAPAHLGHAYSAICFDVIRRALSWLGFEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TDV+DKI RA + GE PL+L+ R+ EY DMA L P +PRVS H+E I
Sbjct: 64 TFVRNITDVEDKIFARAAENGEEPLALAERFAAEYNADMARFGVLAPDIEPRVSTHIEDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I II+N AY V+GDV+F+VE YG+LSGQ L++ RAG RV VD+RK+ PADFA
Sbjct: 124 VGLIQGIIDNGAAYPVDGDVYFSVEAFKPYGQLSGQSLDDLRAGARVEVDARKKAPADFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GE +WD+PWG GRPGWHIECSAMS +L FDIHGGG DL+FPHHENEIAQS
Sbjct: 184 LWKSAKPGELAWDAPWGRGRPGWHIECSAMSLRHLGQTFDIHGGGKDLVFPHHENEIAQS 243
Query: 259 CAA-CQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
AA +D+ YWMHNG + + EKMSKSLGN F RQI + P ALR F +S HYRSP
Sbjct: 244 QAAHGEDTFARYWMHNGFLNFSGEKMSKSLGNVFGCRQIADAVGPEALRFFSVSHHYRSP 303
Query: 318 LNYSVLQLDS---------ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK 368
+N+ V ++D A + Y Y TL+ + L+ ++ G+ + P A+ +
Sbjct: 304 VNFEVDEVDGVTVFRDLEVADRRLDYFYSTLRRLDDFLATGKDPGE-GEVVPEADKLVPA 362
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
R+ ++DD NT I+ A +A K N L+ K PK + +L+K+ E+
Sbjct: 363 AREA----LADDFNTP-IVIAALGEAAKLANKLLDE-PKSAPKPVRR---RTLQKLAREL 413
Query: 429 KEVLRILGLL 438
+EV +G+L
Sbjct: 414 REVGSAIGVL 423
>gi|386313262|ref|YP_006009427.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens 200]
gi|319425887|gb|ADV53961.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens 200]
Length = 459
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/424 (48%), Positives = 264/424 (62%), Gaps = 30/424 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI GK+GMYVCGVT YDL H+GH R VSFD++ RYL ++ EV
Sbjct: 2 LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ +L+ R E D L L P ++PR + H+ +I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHRDFDALNMLRPDFEPRATLHIAEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++ AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF
Sbjct: 122 IDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDENKQNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCE--VALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
LNYS L A A+ +Y ++D + VA +P AE+ I K F A
Sbjct: 302 LNYSEDNLKQARSALERLYTAIKDVDLTVAAAP-------------AEEFIAK----FKA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT + F D ++ IN + K ++ +L ++ +VL +L
Sbjct: 345 AMDDDFNTPEAYSVLF-DMVRDIN---------RLKATDIAKASALAVAMKQLADVLGLL 394
Query: 436 GLLP 439
G P
Sbjct: 395 GQDP 398
>gi|312794405|ref|YP_004027328.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181545|gb|ADQ41715.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 465
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/420 (45%), Positives = 262/420 (62%), Gaps = 15/420 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN+++Q KE F P+ + KV MYVCG T YD H+G+AR + FD L RY E+ EV
Sbjct: 1 MKLYNTLSQTKEEFEPLEKNKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y++NFTDV+DK+I RAN G L+ R+ +EY D L T PR ++ +E +
Sbjct: 61 IYIQNFTDVEDKMINRANKEGITVFELAKRFIEEYYKDADRLNVKRATKNPRATEEIEDM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++I+ AYVV+GDV+F K YG+LS + +E AG RV + +K +P DFA
Sbjct: 121 IALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEKKEDPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+W SPWG GRPGWHIECS M+ YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +W+HNG+V+ NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PL
Sbjct: 241 EAATGKPFARFWLHNGYVSINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S+ ++ A A+ IY ++ E + Q ++ + + I L+ +F M
Sbjct: 301 NFSIDLIEQAEVALKRIYTCYENLEFLI---QNAASSSENDDKLKAAIEDLKAKFIEAME 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDLNT+ TG + ++ IN+ N K E+L +++ +KE+ ILG+L
Sbjct: 358 DDLNTAEA-TGYLFEMVREINTHANSCSK-----------ETLTFVKDTLKELCSILGIL 405
>gi|117921105|ref|YP_870297.1| cysteinyl-tRNA synthetase [Shewanella sp. ANA-3]
gi|166225306|sp|A0KYM2.1|SYC_SHESA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|117613437|gb|ABK48891.1| cysteinyl-tRNA synthetase [Shewanella sp. ANA-3]
Length = 461
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/382 (50%), Positives = 248/382 (64%), Gaps = 17/382 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL + EV
Sbjct: 4 LKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TD+DDKII+RAN+ E+ +L++R E D L + P ++PR + H+ +I
Sbjct: 64 NFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHIAEI 123
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ +++ AYV +GDV F+V P YGRLSGQ LE +AG RV VD K+NP DF
Sbjct: 124 IDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQNPMDF 183
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 184 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 243
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 244 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 303
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NYS L A A+ +Y ++D ++ ++ AE+ + K F A M
Sbjct: 304 INYSEENLKQARAALERLYTAIKDVDLTVTA-----------APAEEFVAK----FKAAM 348
Query: 378 SDDLNTSHILTGAFQDALKFIN 399
DD NT + F D ++ IN
Sbjct: 349 DDDFNTPEAYSVLF-DMVREIN 369
>gi|217973913|ref|YP_002358664.1| cysteinyl-tRNA synthetase [Shewanella baltica OS223]
gi|254781693|sp|B8E5F2.1|SYC_SHEB2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|217499048|gb|ACK47241.1| cysteinyl-tRNA synthetase [Shewanella baltica OS223]
Length = 459
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/421 (47%), Positives = 261/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI GK+GMYVCGVT YDL H+GH R VSFD++ RYL + EV
Sbjct: 2 LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ +L+ R E D L L P ++PR + H+ +I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++ AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF
Sbjct: 122 IDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDETKQNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y ++D ++ ++ AE+ + K F A M
Sbjct: 302 LNYSEDNLKQARSALERLYTAIKDVDLTVAA-----------APAEEFVAK----FKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN L + Q ++L K++ +LGL
Sbjct: 347 DDDFNTPEAYSVLF-DMVREIN-RLKLTDMAQASALAVTL-----------KQLADVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|153000119|ref|YP_001365800.1| cysteinyl-tRNA synthetase [Shewanella baltica OS185]
gi|373948991|ref|ZP_09608952.1| cysteinyl-tRNA synthetase [Shewanella baltica OS183]
gi|386325170|ref|YP_006021287.1| cysteinyl-tRNA synthetase [Shewanella baltica BA175]
gi|187631634|sp|A6WLP8.1|SYC_SHEB8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|151364737|gb|ABS07737.1| cysteinyl-tRNA synthetase [Shewanella baltica OS185]
gi|333819315|gb|AEG11981.1| cysteinyl-tRNA synthetase [Shewanella baltica BA175]
gi|373885591|gb|EHQ14483.1| cysteinyl-tRNA synthetase [Shewanella baltica OS183]
Length = 459
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/421 (47%), Positives = 261/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI GK+GMYVCGVT YDL H+GH R VSFD++ RYL + EV
Sbjct: 2 LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ +L+ R E D L L P ++PR + H+ +I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++ AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF
Sbjct: 122 IDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDETKQNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y ++D ++ ++ AE+ + K F A M
Sbjct: 302 LNYSEDNLKQARSALERLYTAIKDVDLTVAA-----------APAEEFVAK----FKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN L + Q ++L K++ +LGL
Sbjct: 347 DDDFNTPEAYSVLF-DMVREIN-RLKLTDMAQASALAVTL-----------KQLADVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|126173835|ref|YP_001049984.1| cysteinyl-tRNA synthetase [Shewanella baltica OS155]
gi|386340595|ref|YP_006036961.1| cysteinyl-tRNA synthetase [Shewanella baltica OS117]
gi|187631633|sp|A3D302.1|SYC_SHEB5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|125997040|gb|ABN61115.1| cysteinyl-tRNA synthetase [Shewanella baltica OS155]
gi|334862996|gb|AEH13467.1| cysteinyl-tRNA synthetase [Shewanella baltica OS117]
Length = 459
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/438 (47%), Positives = 266/438 (60%), Gaps = 38/438 (8%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI GK+GMYVCGVT YDL H+GH R VSFD++ RYL + EV
Sbjct: 2 LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ +L+ R E D L L P ++PR + H+ +I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++ AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF
Sbjct: 122 IDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDETKQNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y ++D ++ ++ AE+ + K F A M
Sbjct: 302 LNYSEDNLKQARSALERLYTAIKDVDLTVAA-----------APAEEFVAK----FKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN L + Q ++L K++ +LGL
Sbjct: 347 DDDFNTPEAYSVLF-DMVREIN-RLKLTDMAQASALAVTL-----------KQLADVLGL 393
Query: 438 LPP---------GAYSEV 446
L G+Y EV
Sbjct: 394 LSQEPEAFFQGGGSYDEV 411
>gi|146292587|ref|YP_001183011.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens CN-32]
gi|166225305|sp|A4Y5H9.1|SYC_SHEPC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145564277|gb|ABP75212.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens CN-32]
Length = 461
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/422 (47%), Positives = 262/422 (62%), Gaps = 26/422 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI GK+GMYVCGVT YDL H+GH R VSFD++ RYL ++ EV
Sbjct: 4 LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ +L+ R E D L L P ++PR + H+ +I
Sbjct: 64 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHRDFDALNMLRPDFEPRATLHIAEI 123
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++ AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF
Sbjct: 124 IDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDENKQNPMDF 183
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 184 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 243
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 244 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 303
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y ++D ++ T PA E + +F A M
Sbjct: 304 LNYSEDNLKQARSALERLYTAIKDVDL----------TVAAAPAEEFIV-----KFKAAM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN + K ++ +L ++ +VL +LG
Sbjct: 349 DDDFNTPEAYSVLF-DMVRDIN---------RLKATDIAKASALAVAMKQLADVLGLLGQ 398
Query: 438 LP 439
P
Sbjct: 399 DP 400
>gi|312126760|ref|YP_003991634.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
gi|311776779|gb|ADQ06265.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
Length = 465
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/431 (45%), Positives = 264/431 (61%), Gaps = 17/431 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T KE F P+ GKV MYVCG T YD H+G+AR + FD L RY E+ EV
Sbjct: 1 MKLYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y++NFTDV+DK+I RAN G L+ R+ QEY D L T PR ++ +E +
Sbjct: 61 IYIQNFTDVEDKMINRANKEGITVFELAERFIQEYYKDADRLNVKRATKNPRATEEIEDM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++I+ AYVV+GDV+F K YG+LS + +E AG RV + +K +P DFA
Sbjct: 121 IALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEKKEDPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+W SPWG GRPGWHIECS M+ YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PL
Sbjct: 241 EAATGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S+ ++ A A+ IY ++ E + Q ++ + + I L+ +F M
Sbjct: 301 NFSIDLIEQAEVALKRIYTCYENLEFLI---QNAASSSENDDMLKAAIEDLKAKFIDAME 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDLNT+ TG + ++ IN+ N K E+L ++ +KE+ ILG+L
Sbjct: 358 DDLNTAEA-TGYLFEMVREINTYANSCSK-----------ETLTFAKDTLKELCSILGIL 405
Query: 439 PPGAYSEVKTA 449
YSE + A
Sbjct: 406 E--QYSEKEEA 414
>gi|120599417|ref|YP_963991.1| cysteinyl-tRNA synthetase [Shewanella sp. W3-18-1]
gi|166225307|sp|A1RL92.1|SYC_SHESW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120559510|gb|ABM25437.1| cysteinyl-tRNA synthetase [Shewanella sp. W3-18-1]
Length = 461
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/422 (47%), Positives = 262/422 (62%), Gaps = 26/422 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI GK+GMYVCGVT YDL H+GH R VSFD++ RYL ++ EV
Sbjct: 4 LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ +L+ R E D L L P ++PR + H+ +I
Sbjct: 64 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHRDFDALNMLRPDFEPRATLHIAEI 123
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++ AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF
Sbjct: 124 IDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDENKQNPMDF 183
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 184 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 243
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 244 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 303
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y ++D ++ T PA E + +F A M
Sbjct: 304 LNYSEDNLKQARSALERLYTAIKDVDL----------TVAAAPAEEFIV-----KFKAAM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN + K ++ +L ++ +VL +LG
Sbjct: 349 DDDFNTPEAYSVLF-DMVRDIN---------RLKATDIAKASALAVAMKQLADVLGLLGQ 398
Query: 438 LP 439
P
Sbjct: 399 DP 400
>gi|372489694|ref|YP_005029259.1| cysteinyl-tRNA synthetase [Dechlorosoma suillum PS]
gi|359356247|gb|AEV27418.1| cysteinyl-tRNA synthetase [Dechlorosoma suillum PS]
Length = 476
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/374 (52%), Positives = 240/374 (64%), Gaps = 15/374 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++K+ F PI GKV MYVCG+T YD HLGHAR V FD +YR+L +V
Sbjct: 2 LKIYNTIAREKQEFVPIEAGKVKMYVCGMTVYDFCHLGHARVLVVFDAVYRWLRASGLDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + GE L++R+ D A L PT++PR ++++ Q+
Sbjct: 62 TYVRNITDIDDKIIRRAVENGETIGQLTDRFIAAMDEDAAALGVQKPTHEPRATEYVPQM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I Q+ N AY +GDV F+V K P YGRLSG+ L++ RAGERV VDS K++P DF
Sbjct: 122 LGLIGQLEANGLAYKAADGDVNFSVRKFPGYGRLSGKSLDDLRAGERVEVDSAKQDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEP+W+SPWG GRPGWHIECSAMS+ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKHAKAGEPAWESPWGAGRPGWHIECSAMSSDLLGKHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMHNG V ++EKMSKSLGNFFTIR + ++Y +R F++ AHYRSP
Sbjct: 242 SEGAHGCTFVNYWMHNGFVRVDDEKMSKSLGNFFTIRDVLKKYDAEVVRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A A+ +Y L K A A D F A M
Sbjct: 302 LNYSDAHLDDARQALTRLYTAL--------------KAAPAEAVAVDWNEAHAQRFQAAM 347
Query: 378 SDDLNTSHILTGAF 391
DD NT L F
Sbjct: 348 DDDFNTPEALAVLF 361
>gi|222530216|ref|YP_002574098.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
gi|254765173|sp|B9MMM6.1|SYC_ANATD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|222457063|gb|ACM61325.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
Length = 465
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/420 (45%), Positives = 260/420 (61%), Gaps = 15/420 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T KE F P+ GKV MYVCG T YD H+G+AR + FD L RY E+ EV
Sbjct: 1 MKLYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y++NFTDV+DK+I RAN G L+ R+ QEY D L T PR ++ +E +
Sbjct: 61 IYIQNFTDVEDKMINRANKEGITVFELAERFIQEYYKDADRLNVKRATKNPRATEEIEDM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++I+ AYVV+GDV+F K YG+LS + +E AG RV + +K +P DFA
Sbjct: 121 IALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEKKEDPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+W SPWG GRPGWHIECS M+ YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PL
Sbjct: 241 EAATGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S+ ++ A A+ IY ++ E + Q ++ + + I +L+ +F M
Sbjct: 301 NFSIDLIEQAEVALKRIYTCYENLEFLI---QNAASSSENDDKLKAAIEELKAKFIDAME 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDLNT+ TG + ++ IN+ N K E+L ++ +KE+ ILG+L
Sbjct: 358 DDLNTAEA-TGYLFEMVREINTYANSCSK-----------ETLTFAKDTLKELCSILGIL 405
>gi|337288279|ref|YP_004627751.1| cysteinyl-tRNA synthetase [Thermodesulfobacterium sp. OPB45]
gi|334902017|gb|AEH22823.1| cysteinyl-tRNA synthetase [Thermodesulfobacterium geofontis OPF15]
Length = 490
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/421 (46%), Positives = 267/421 (63%), Gaps = 9/421 (2%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
TL+IYNS+T++ E F P+ KV MYVCG+TAYD SHLGHAR+AV FD+ YR L++L E
Sbjct: 6 TLRIYNSLTKKIEDFIPLNPPKVTMYVCGITAYDSSHLGHARSAVIFDVFYRLLKYLGYE 65
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
V YVRN TD+DDKII R+N G L+ +Y +EY L L PTY+PR S+H+ +
Sbjct: 66 VIYVRNITDIDDKIINRSNKEGIPWKELTQKYIEEYEKVTQALGLLKPTYEPRASEHIPE 125
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I +I ++I AY GDV+F V K P+YG+LSG+++E AG R+ V +K+NP DF
Sbjct: 126 IISLIEKLIEKGLAYQSNGDVYFEVTKFPSYGKLSGRKIEELIAGVRIEVSEKKKNPLDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK GEP W+SPWG GRPGWHIECSAM+ YL DIHGGG+DLIFPHHENEIAQ
Sbjct: 186 ALWKSAKPGEPFWESPWGKGRPGWHIECSAMALKYLGETIDIHGGGLDLIFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + Y++H+G +T EKMSKSLGN+ T+ + + +HP ++ FL+S HYRSP
Sbjct: 246 SEGATEKQFARYFIHHGLITVKGEKMSKSLGNYVTMEYLLKTFHPEVIKAFLLSTHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+Y + + A++ Y+TL + A P +E G + E + + F + +
Sbjct: 306 LDYREENIKNMEKAIYRFYETLYWLKKA-QPLKE-GLLSEKARKLEKGLKDFENNFISAL 363
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL-RILG 436
DD NT+ L F F N N + K + L+ L KIE +++++ +ILG
Sbjct: 364 LDDFNTALALGHLFS----FENEIYNFITKTPNLTTEEVLL--LEKIEKKIRDLSGKILG 417
Query: 437 L 437
+
Sbjct: 418 I 418
>gi|345872177|ref|ZP_08824115.1| cysteinyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
gi|343919258|gb|EGV30008.1| cysteinyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
Length = 463
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/382 (50%), Positives = 247/382 (64%), Gaps = 18/382 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+NS+T+QK++FTPI GKV MYVCG+T YD HLGHAR V FD++YRYL L V
Sbjct: 2 LQIHNSLTRQKDVFTPIEPGKVRMYVCGMTVYDYCHLGHARVMVVFDVVYRYLRALGYAV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + GE L+ R+ Q D L LPP+ +PR + HM +I
Sbjct: 62 TYVRNITDIDDKIIRRAAENGETFQELTERFIQAMREDGDALGVLPPSQEPRATGHMSEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ +++ AYV + GDV++AV + YG+LSG+ ++ RAG RV + KR+P DF
Sbjct: 122 LAMVETLVDKGMAYVADNGDVYYAVGQFTGYGKLSGKDPQDLRAGARVEIGESKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK GEP+W+SPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 ALWKSAKPGEPAWESPWGMGRPGWHIECSAMSTCCLGNHFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMHNG V N EKMSKSLGNFFT+R+I +RY +R+F++++HYRSP
Sbjct: 242 SEGATGEPFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILQRYQAEEVRYFILTSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY L +A A+ +Y L+ F E R+ F A M
Sbjct: 302 LNYDDENLQNARGALTRLYTALRGLPEVEPAFGE----------------TYRERFSAAM 345
Query: 378 SDDLNTSHILTGAFQDALKFIN 399
DD NT L F D ++ IN
Sbjct: 346 DDDFNTPVALAVLF-DLVREIN 366
>gi|146295747|ref|YP_001179518.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|187629798|sp|A4XHE2.1|SYC_CALS8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145409323|gb|ABP66327.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 465
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/420 (45%), Positives = 261/420 (62%), Gaps = 15/420 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T KE F P+ GKV MYVCG T YD H+G+AR + FD L RY E+ EV
Sbjct: 1 MKLYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y++NFTDV+DK+I RAN G L+ R+ QEY D L T PR ++ +E +
Sbjct: 61 IYIQNFTDVEDKMINRANKEGITVFELAERFIQEYYKDADRLNVRRATKSPRATEEIEDM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++I+ AYVV+GDV+F K YG+LS + +E+ AG RV +K +P DFA
Sbjct: 121 IALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEDLMAGARVDPSEKKEDPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+W+SPWG GRPGWHIECS M+ YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAKKEGEPAWNSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PL
Sbjct: 241 EAATGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S+ ++ A A+ IY ++ E + Q ++ + + I +L+ +F M
Sbjct: 301 NFSIDLIEQAEVALKRIYTCYENLEFLI---QNAASSSENDDKLKAAIEELKAKFIDAME 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDLNT+ TG + ++ IN+ N K E+L ++ +KE+ ILG+L
Sbjct: 358 DDLNTAEA-TGYLFEMVREINTHANSCSK-----------ETLTFAKDILKELCSILGIL 405
>gi|284048089|ref|YP_003398428.1| cysteinyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
gi|283952310|gb|ADB47113.1| cysteinyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
Length = 481
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 275/437 (62%), Gaps = 20/437 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+++++YN MT+QKE F P+ GKVG+YVCGVT Y+ H+G+AR V +D + R+L+H
Sbjct: 1 MSIRVYNDMTRQKEEFVPLHPGKVGIYVCGVTPYNHPHIGNARPFVVWDTIRRFLDHEGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYV+NFTDVDDKIIR AN+ G ++NRY + Y M L PRVS+H+
Sbjct: 61 DVTYVQNFTDVDDKIIRAANEEGVTWDVIANRYIKAYFEVMDKLHVKRAHIYPRVSEHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + ++INN YVV+GDV++ VE+ +YG LSG++L++ AG RV VD RK NP D
Sbjct: 121 DIIHTVQELINNGYGYVVDGDVYYRVERFSHYGELSGRKLDDMMAGARVDVDERKENPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+AK GEPSWDSPWG GRPGWHIECS MS YL + D HGGG DLIFPHHENEIA
Sbjct: 181 FALWKSAKPGEPSWDSPWGKGRPGWHIECSTMSTKYLGNTLDFHGGGSDLIFPHHENEIA 240
Query: 257 QSCAACQ-DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
QS A V YW+HNG +T N EKMSKSLGNF T+ + + Y P +R+F+++ HYR
Sbjct: 241 QSEGATGVHPFVRYWVHNGFITINEEKMSKSLGNFKTVYDLLKEYEPETIRYFILNTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-----DCINKLR 370
SPL++S +L A ++L+ A + QE + + P AE D + +LR
Sbjct: 301 SPLDFSQERLAEAG-------RSLERLRTAQNNLQEIQQVITVGPDAESLALRDKVEELR 353
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKE 430
F MSDD NTS ++ F A K IN N + K+ L+E +I+ KE
Sbjct: 354 KGFFDAMSDDFNTSLAISYLFALA-KEINVYHNAIISG-AKKPDGKLVE---QIDKAWKE 408
Query: 431 VLRILGLLP--PGAYSE 445
++ ++G+L P A E
Sbjct: 409 MIGVIGILENQPAANGE 425
>gi|328951998|ref|YP_004369332.1| cysteinyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
gi|328452322|gb|AEB08151.1| cysteinyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
Length = 490
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/387 (48%), Positives = 250/387 (64%), Gaps = 7/387 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN+++++KE F P+ G V +Y CGVT YD H+GHAR+AV FD++ RYL L +V
Sbjct: 1 MQVYNTLSRRKEAFIPLKPGIVQIYACGVTVYDDCHIGHARSAVVFDVIVRYLRFLGNKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
++VRNFTD+DDKII+RA + +++ Y + DMA L P +P+ +DH+++I
Sbjct: 61 SWVRNFTDIDDKIIQRAEREHTSWKTVAETYIASFQRDMAALGVAPADIEPKATDHIDEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I + + AY GDV+F V K P YG+LSG+ L++ AG RV V+ +K NP DFA
Sbjct: 121 IGFIQVLEDQGLAYQRNGDVYFPVAKFPGYGKLSGRSLDDMLAGARVDVNIQKDNPFDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA+K GEP+WDSPWGPGRPGWHIECSAMS HYL FDIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKASKPGEPAWDSPWGPGRPGWHIECSAMSRHYLGETFDIHGGGADLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA YW+HNG VT N EKMSKSLGNFFTIR++ ++HP +R FLI HYRSPL
Sbjct: 241 EAAHGKPLARYWLHNGMVTVNQEKMSKSLGNFFTIREVLAKFHPEVVRFFLIQNHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT------ARINPAAEDCINKLRDE 372
++S L A +A+ +Y TL + P + ++ + + +R
Sbjct: 301 DFSDQALAEAENALERLYSTLARLDQTTGPIAAPEAISGAFSLSGLDSEEQSRLLTIRSR 360
Query: 373 FHARMSDDLNTSHILTGAFQDALKFIN 399
F M DD NT+ L G DA++ +N
Sbjct: 361 FLEAMDDDFNTAQAL-GVLFDAVRLLN 386
>gi|167624689|ref|YP_001674983.1| cysteinyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
gi|189082075|sp|B0TLV2.1|SYC_SHEHH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|167354711|gb|ABZ77324.1| cysteinyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
Length = 459
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/421 (48%), Positives = 258/421 (61%), Gaps = 30/421 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YNS+T+QKE F P+ GKVGMYVCGVT YDL H+GH R VSFD++ RYL + +V
Sbjct: 2 LKLYNSLTRQKEQFVPLQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ SL+ R E D L P +PR + H+ +I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCDSLTERLIAEMHKDFDSLNMARPDNEPRATQHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++I D AYV GDV F+V P YGRLSGQ LE +AG RV V+ KR+P DF
Sbjct: 122 IDMVERLIERDHAYVASSGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDTKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVLAHYDAATVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVAL--SPFQEHGKTARINPAAEDCINKLRDEFHA 375
LNYS L A A+ IY L+D ++++ +P QE +F
Sbjct: 302 LNYSEDNLKQAKAALERIYTALKDLDLSVEAAPAQE-----------------FVAKFKT 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT + F D ++ IN + K ++ +L E+ +VL IL
Sbjct: 345 AMDDDFNTPEAYSVLF-DMVREIN---------RLKATDMAKASALGVALKELADVLGIL 394
Query: 436 G 436
G
Sbjct: 395 G 395
>gi|212223750|ref|YP_002306986.1| cysteinyl-tRNA synthetase [Thermococcus onnurineus NA1]
gi|229558797|sp|B6YUQ3.1|SYC_THEON RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|212008707|gb|ACJ16089.1| cysteinyl-tRNA synthetase [Thermococcus onnurineus NA1]
Length = 476
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/414 (44%), Positives = 258/414 (62%), Gaps = 7/414 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +++YN++T+QKE F P+ G+V MYVCG T YD +HLGHAR ++FD++ RYLEH
Sbjct: 1 MAIRVYNTLTKQKEEFRPLREGEVRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V V NFTD+DDKIIRRAN+ GE+P L+ ++ + +L DM L+ P PRV++H++
Sbjct: 61 TVLMVMNFTDIDDKIIRRANETGEDPKELAEKFLRYFLEDMKALKVKPADIYPRVTEHIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I D + ++ AY V+F V K +YG+LSG +LE G RV K+NP D
Sbjct: 121 DIIDFVRKLQEKGYAYEGNDGVYFEVRKFKDYGKLSGIKLEELVKGARVEPGEGKKNPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECS MS YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKKAKPGEPKWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V YW+H G V + EKMSKSLGNF TIR++ ++Y P +R F++ HYRS
Sbjct: 241 QSEACTGHEWVRYWLHTGFVMVSGEKMSKSLGNFVTIRELLQKYSPEVIRFFVLQKHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+Y+ + A + + +Y TL++ VA+ + + + + R +F+
Sbjct: 301 PLDYTEEGIQHAKNNLERLYNTLENIRVAMEKADVAFRWDEEEFELYETVREARKKFYDA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLN--MLKKKQPKQQQLSLIESLRKIENEV 428
M DD NT+ L F+ +++++N + K ++PK+ L KI +EV
Sbjct: 361 MDDDFNTAEALKAVFE-----VSNAVNRYLTKVEKPKESVLRKALEFFKIVSEV 409
>gi|451979646|ref|ZP_21928061.1| Cysteinyl-tRNA synthetase [Nitrospina gracilis 3/211]
gi|451763174|emb|CCQ89258.1| Cysteinyl-tRNA synthetase [Nitrospina gracilis 3/211]
Length = 480
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/389 (49%), Positives = 246/389 (63%), Gaps = 8/389 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TL+I+N++T KE F P+ GKV MYVCGVT YD SH+GHARAA+ FD LYRYL+H
Sbjct: 1 MTLRIFNTLTGNKEEFVPLSPGKVRMYVCGVTVYDYSHVGHARAAIVFDTLYRYLKHAGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRNFTD+DDKII RA + ++++Y + DM L PT +P ++H+
Sbjct: 61 DVTYVRNFTDIDDKIINRAREQNVPWQEVTHKYIDAFYEDMDALNVERPTTEPLATEHIG 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI ++ AY EGDV+++V+ P YGRLS + +E+ +AG RV K++P D
Sbjct: 121 DMIKMIEGLVKAGKAYPAEGDVYYSVKAFPEYGRLSKRNIEDMQAGARVEPGEHKKDPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK +K GEP+WDSPWGPGRPGWHIECSAMS L FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKKSKPGEPAWDSPWGPGRPGWHIECSAMSYQLLGETFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QSC V YW+HNG V N EKMSKSLGNFFTIR I + +HP LR FL++ HYR
Sbjct: 241 QSCGFTGKPPVRYWVHNGFVNINKEKMSKSLGNFFTIRDILKTFHPEVLRLFLLTNHYRG 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK--LRDEFH 374
P+++S L A + Y+ E A +G A I AED + L +F
Sbjct: 301 PIDFSDQYLKDAEKNLDRFYEFFAQAESAQG--SRNGGAAEI---AEDTLRSQPLLKKFD 355
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLN 403
M DD NT+ L ++ L+ +N L
Sbjct: 356 EAMDDDFNTAVALADMMEE-LRRLNKQLG 383
>gi|381151336|ref|ZP_09863205.1| cysteinyl-tRNA synthetase [Methylomicrobium album BG8]
gi|380883308|gb|EIC29185.1| cysteinyl-tRNA synthetase [Methylomicrobium album BG8]
Length = 477
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/421 (47%), Positives = 262/421 (62%), Gaps = 30/421 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T++KE F P + GKVGMYVCG+T YD H+GHAR V FD + RY HL ++
Sbjct: 2 LKIYNTLTRRKETFKPRIEGKVGMYVCGMTVYDYCHIGHARVMVVFDTVARYFRHLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RAN+ GE+ L+ R+ D L LPP +PR + + I
Sbjct: 62 TYVRNITDIDDKIIQRANENGEDFNRLTARFIDAMHEDERALAVLPPDIEPRATQSIASI 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++ AY+ GDVF+AVEK +YG+LSG++LE +AGERV VD+ K+NP DF
Sbjct: 122 IAMIEALLAKGYAYIGSSGDVFYAVEKFRDYGKLSGKKLEELQAGERVDVDAAKQNPFDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKA EPSW +PWG GRPGWHIECSAMS L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKMAKANEPSWPAPWGDGRPGWHIECSAMSTCCLGNHFDIHGGGMDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMHNG V N EKMSKSLGNFFT+R++ ++Y P +R F++S+HYRSP
Sbjct: 242 SEGATGEKFVNLWMHNGFVRVNEEKMSKSLGNFFTVREVLKQYRPEIIRFFILSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS QL+ ++ A+ +Y + G TA P D R F M
Sbjct: 302 LNYSDEQLNESATALNRLYTA------------QRGVTAPDAPILPD----YRGRFEQAM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT ++ F + LN K K +E + +K++ +LG+
Sbjct: 346 NDDFNTPVAVSVLFD-----LARELNKAKTKD--------VEQAGQFAASLKQLGGLLGI 392
Query: 438 L 438
L
Sbjct: 393 L 393
>gi|78044929|ref|YP_361143.1| cysteinyl-tRNA synthetase [Carboxydothermus hydrogenoformans
Z-2901]
gi|109894889|sp|Q3A9P1.1|SYC_CARHZ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|77997044|gb|ABB15943.1| cysteinyl-tRNA synthetase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 465
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/385 (49%), Positives = 251/385 (65%), Gaps = 9/385 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN++T+ KE F P GKV MYVCG T Y+ H+G+AR V FD + RY E+ EV
Sbjct: 1 MKIYNTLTKTKEEFIPREPGKVYMYVCGPTTYNYIHIGNARPIVFFDTVRRYFEYKGFEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTD+DDKII RA + G +P+ L +Y EY D L T P+V++H+ +I
Sbjct: 61 IYVQNFTDIDDKIINRALEEGISPIELGQKYIIEYFKDADRLGVKRATVHPKVTEHIPEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+M+ +I AY VEG+V+FAV+ +YG+LSG+ LE +AG RV VD +K+NP DFA
Sbjct: 121 IEMVKGLIEKGYAYEVEGNVYFAVDSFSDYGKLSGRDLEELKAGARVEVDEKKKNPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP W+SPWGPGRPGWHIECSAMS YL FDIHGGG DL+FPHHENE+AQS
Sbjct: 181 LWKKAKPGEPYWESPWGPGRPGWHIECSAMSLKYLGENFDIHGGGADLVFPHHENEVAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YWMHNG +T N EKMSKSLGNFF +R+I E++ +R FL+S HYRSPL
Sbjct: 241 EAFTGKPFARYWMHNGFITVNQEKMSKSLGNFFLVREILEKFPGRVVRFFLLSTHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++ +L+ A A+ + +Q+ EV P + ARI E N LRD F+ M
Sbjct: 301 DFDDKKLNEAKAALERVDNFVQNLKEVNPLPGE-----ARIE-IQEKITNFLRD-FNEAM 353
Query: 378 SDDLNTSHILTGAFQDALKFINSSL 402
DD NT+ + F+ ++F N+ +
Sbjct: 354 EDDFNTAQAMASLFE-LVRFGNTQI 377
>gi|253999955|ref|YP_003052018.1| cysteinyl-tRNA synthetase [Methylovorus glucosetrophus SIP3-4]
gi|253986634|gb|ACT51491.1| cysteinyl-tRNA synthetase [Methylovorus glucosetrophus SIP3-4]
Length = 456
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/378 (51%), Positives = 246/378 (65%), Gaps = 21/378 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+ ++K+ F PIV GKV MYVCG+T YD HLGHAR V FD++ R+L +V
Sbjct: 2 LKIYNSLAREKQTFVPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRTSGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + GE+ +L++R+ D A L + P +P+ ++H+ +
Sbjct: 62 TYVRNITDIDDKIIKRAQENGESIQALTSRFITAMDEDAARLGVMRPDLEPKATEHITGM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DMI +I AY + GDVF++V YG+LSG+ LE+ RAGERV +D KR+P DF
Sbjct: 122 LDMIAALIEKGFAYPADNGDVFYSVSSFAGYGKLSGKSLEDLRAGERVEIDQYKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEPSWDSPWG GRPGWHIECSAM A +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPSWDSPWGKGRPGWHIECSAMGACHLGPHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+YWMHNG + ++EKMSKSLGNFFTIRQ+ E+Y +R F++ A YRSP
Sbjct: 242 SEAANGCTFVNYWMHNGFIRVDDEKMSKSLGNFFTIRQVLEKYDAEVVRFFILRAQYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ---EHGKTARINPAAEDCINKLRDEFH 374
LNYS LD A A+ +Y L+ +AL F + + AR F
Sbjct: 302 LNYSDHHLDDARQALTRLYTALRG--LALPTFTIDWQQPQAAR---------------FK 344
Query: 375 ARMSDDLNTSHILTGAFQ 392
A M DD NTS F+
Sbjct: 345 AAMDDDFNTSEAFAVLFE 362
>gi|120602598|ref|YP_966998.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
gi|187629811|sp|A1VDQ5.1|SYC_DESVV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120562827|gb|ABM28571.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
Length = 485
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/434 (45%), Positives = 267/434 (61%), Gaps = 13/434 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYNS++++KELFTP V GKV MYVCG+TAYDL H+GHAR+AV FD+L RYL H +V
Sbjct: 1 MQIYNSLSRRKELFTPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+ RNFTDVDDKII+RAN+ G ++ +Y + DM L L +P+ + H+ ++
Sbjct: 61 TFARNFTDVDDKIIKRANEEGLTSQQVAEKYIDTFYEDMDRLNVLRADIEPKATGHILEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I AY GDV+F V P YG+LSG+ +++ R+G RVA K +P DF
Sbjct: 121 IALCEKLIAKGKAYATPSGDVYFRVRSFPEYGKLSGRDIDDMRSGARVAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK GEPSW SPWG GRPGWHIECSAMS ++ DIHGGG DLIFPHHENEIAQ
Sbjct: 181 ALWKSAKPGEPSWTSPWGEGRPGWHIECSAMSEKHMPLPLDIHGGGQDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AA V YWMHNG V + EKMSKSLGNF TIR I E Y P LR FL++ HYRSP
Sbjct: 241 TEAALDKPFVRYWMHNGFVQVDAEKMSKSLGNFKTIRDILEGYLPEVLRFFLLTKHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA-RINPAAEDC---INKLRDEF 373
++++ +D A ++ IY+ L E G++ P D + L F
Sbjct: 301 IDFTFDSMDEAEKSLKRIYEALSLART------ERGRSKWSATPLPADVTAEFDTLDRAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
+ DDLNT+ L F ++ +N L K + + L+L+E L + + +VL
Sbjct: 355 DEALEDDLNTAAALGHVFG-TIRLVNRLLED-KNLRKSAETLALLERLDGLVAKWMKVLG 412
Query: 434 ILGLLPPGAYSEVK 447
+ G P S++K
Sbjct: 413 VFGREPEAFLSDLK 426
>gi|294101993|ref|YP_003553851.1| cysteinyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
gi|293616973|gb|ADE57127.1| cysteinyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
Length = 472
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/421 (43%), Positives = 270/421 (64%), Gaps = 8/421 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L +YN +T++KE F P+ G+VG Y CG T YD H+G+AR + FD+ RYLE +
Sbjct: 1 MSLMLYNDLTRKKEPFIPLKEGEVGFYSCGPTVYDFFHIGNARPFIVFDVFRRYLEDIGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V +V+NFTD+DDK+I RAN+ G L++ + +EY D L PR +DHM+
Sbjct: 61 KVVFVQNFTDIDDKMINRANEEGITVKELADAFIKEYFEDADALGVRRADIYPRATDHMK 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I +++ +I+ AYVV+GDVFF+VE P YG+LS Q +E+ ++G R+ V+ +KR+P D
Sbjct: 121 EIVEVVQTLIDKGHAYVVDGDVFFSVESFPGYGKLSKQSIEDLQSGSRIDVNEQKRHPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA K GEP+W+SPWG GRPGWHIECS MS YL + FDIH GG DLIFPHHENE+A
Sbjct: 181 FALWKAQKPGEPAWESPWGLGRPGWHIECSVMSTKYLGNTFDIHSGGSDLIFPHHENEVA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ AA V +W+HNG++ + EKMSKSLGNF T+R ++Y PLA+R+F++SAHYRS
Sbjct: 241 QAEAATGMQFVRFWLHNGYLLIDKEKMSKSLGNFLTVRNARKKYSPLAIRYFMLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S L+ A+ AV + D E AL ++ K +E I + +F+
Sbjct: 301 PINFSEEGLNQATGAVERLRNCWTDLEYALQSREQKEKDDTEAFLSE--IKQAETKFYEE 358
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M+DD NT+ L F+ ++ IN+ L K + ++ + ++ ++ I+G
Sbjct: 359 MNDDFNTAGALGSVFE-VVRLINTYL-----KDNSSIDFKVCKAAQTFFTKIDGIMGIMG 412
Query: 437 L 437
L
Sbjct: 413 L 413
>gi|56460141|ref|YP_155422.1| cysteinyl-tRNA synthetase [Idiomarina loihiensis L2TR]
gi|61216136|sp|Q5QYP3.1|SYC_IDILO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|56179151|gb|AAV81873.1| Cysteinyl-tRNA synthetase [Idiomarina loihiensis L2TR]
Length = 459
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/423 (46%), Positives = 266/423 (62%), Gaps = 28/423 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L ++N++T++K+LF PI G VG+YVCGVT YD H+GHAR V+FD++ RYL L
Sbjct: 1 MALTVFNTLTRKKQLFEPIQPGHVGIYVCGVTTYDYCHIGHARTYVAFDIVVRYLRKLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V YVRN TD+DDKII+RA + GE+ ++ R+ +E D L + P +PRV+ HM+
Sbjct: 61 SVKYVRNITDLDDKIIKRAAENGEDFHQVTERFIREMHKDFDALNLVRPDIEPRVTSHMD 120
Query: 137 QIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+I MI ++I N AY GDV F V +YG+LS Q LE +AG RV VD+ K++P
Sbjct: 121 EIILMIERLIENGNAYEAGNGDVLFDVSTFNDYGKLSRQDLEQLQAGSRVDVDAAKQDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK+AK GEPSW SPWG GRPGWHIECSAM+ +L S FDIHGGG DL FPHHENEI
Sbjct: 181 DFVLWKSAKPGEPSWSSPWGEGRPGWHIECSAMNKKHLGSTFDIHGGGSDLSFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQSC A Q V YWMH+G V +NEKMSKSLGNFFTIR + E+Y +R+FL+S+HYR
Sbjct: 241 AQSCCANQSEYVKYWMHSGMVQVDNEKMSKSLGNFFTIRSVLEQYDAETVRYFLLSSHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
S LNY+ LD A A+ +Y L+D ++P A+E+ +K F
Sbjct: 301 SQLNYTQENLDQAHSALERLYTALRD----ITP----------QTASEELRSKYWQSFQQ 346
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DDLN ++ F+ I +N ++ P ++ ++ + + E+ ++
Sbjct: 347 AMDDDLNAPEAMSVLFE-----IAREINRNRESAP--------DTAAQLAHVLLELAEVM 393
Query: 436 GLL 438
GLL
Sbjct: 394 GLL 396
>gi|170727456|ref|YP_001761482.1| cysteinyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
gi|229558789|sp|B1KLU0.1|SYC_SHEWM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169812803|gb|ACA87387.1| cysteinyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
Length = 459
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/382 (50%), Positives = 246/382 (64%), Gaps = 17/382 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YNS+T+QKE F P+ GKVGMYVCG+T YDL H+GH R V+FD++ RYL + +V
Sbjct: 2 LKLYNSLTRQKEEFKPLQPGKVGMYVCGITIYDLCHIGHGRTFVAFDMIVRYLRYSGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
++RN TDVDDKII+RA + E+ SL+ R E D L P ++PR + HM +I
Sbjct: 62 NFLRNITDVDDKIIKRAAENKESCDSLTERLIGEMHKDFDSLNMKRPDFEPRATLHMAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ ++I + AYV GDV F+V P YGRLSGQ LE +AG RV V+ KR+P DF
Sbjct: 122 IEMVEKLIEKEHAYVSSNGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDSKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHNTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLAHYDAATIRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+D ++ + P AAE+ ++K F M
Sbjct: 302 LNYSEDNLKQAKSALARLYTALKDLDLTVEP-----------AAAENFVSK----FKQAM 346
Query: 378 SDDLNTSHILTGAFQDALKFIN 399
DD NT + F D ++ +N
Sbjct: 347 DDDFNTPEAYSVLF-DMVREVN 367
>gi|24373357|ref|NP_717400.1| cysteinyl-tRNA synthetase CysS [Shewanella oneidensis MR-1]
gi|30316159|sp|Q8EG22.1|SYC_SHEON RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|24347617|gb|AAN54844.1| cysteinyl-tRNA synthetase CysS [Shewanella oneidensis MR-1]
Length = 459
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/423 (47%), Positives = 263/423 (62%), Gaps = 33/423 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL + EV
Sbjct: 2 LKIYNSITRQKQEFKPINPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TD+DDKII+RAN+ E+ +L++R E D L P ++PR + H+ +I
Sbjct: 62 NFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMKRPDFEPRATLHIAEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ +++ AYV +GDV F+V P YGRLSGQ LE +AG RV VD K+NP DF
Sbjct: 122 IDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMIDREKMSKSLGNFFTIRDVLSHYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCE--VALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
+NYS L A A+ +Y ++D + VA +P AE+ + K F A
Sbjct: 302 INYSEENLKQARAALERLYTAIKDVDLTVAAAP-------------AEEFVAK----FKA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT + F D ++ IN + +L+ + + +K++ +L
Sbjct: 345 AMDDDFNTPEAYSVLF-DMVREIN------------RLKLTDMAEASALAVSMKQLADVL 391
Query: 436 GLL 438
GLL
Sbjct: 392 GLL 394
>gi|114330220|ref|YP_746442.1| cysteinyl-tRNA synthetase [Nitrosomonas eutropha C91]
gi|122314719|sp|Q0AJJ4.1|SYC_NITEC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|114307234|gb|ABI58477.1| cysteinyl-tRNA synthetase [Nitrosomonas eutropha C91]
Length = 467
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/324 (55%), Positives = 231/324 (71%), Gaps = 1/324 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIY+++T+ + F P+ GKV MYVCG+T YD HLGHAR V FD + R+L+ L EV
Sbjct: 2 LKIYDTLTRSRREFIPLTPGKVKMYVCGMTVYDHCHLGHARVLVVFDSVVRWLQTLDYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + E +L+ RY Q D A L + P+++PR ++ +E +
Sbjct: 62 TYVRNITDIDDKIIRRALENHEPFGALTARYIQAMEEDAAALGIISPSFEPRATECIESM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +++ AYV GDVF+ V + P YG+LSG+ L++ RAGERV +D+ KR+P DF
Sbjct: 122 VTMIESLLSKGLAYVANNGDVFYDVRRFPGYGKLSGKSLDDLRAGERVEIDTNKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EPSWDSPWG GRPGWHIECSAMS HYL +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPDEPSWDSPWGKGRPGWHIECSAMSGHYLGERFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S +V+YWMHNG V +NEKMSKSLGNFFT+R++ RY P +R F++ AHYRSP
Sbjct: 242 SEGVHGHPHVNYWMHNGFVRVDNEKMSKSLGNFFTVREVLARYQPEVVRFFIVRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQD 341
LNYS L+ A +A+ +Y L++
Sbjct: 302 LNYSDAHLNDARNALERLYTALKN 325
>gi|223478067|ref|YP_002582621.1| cysteinyl-tRNA synthetase [Thermococcus sp. AM4]
gi|214033293|gb|EEB74120.1| Cysteinyl-tRNA synthetase [Thermococcus sp. AM4]
Length = 476
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/424 (44%), Positives = 262/424 (61%), Gaps = 13/424 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ ++IYN++T+QKE F P+ G+V MYVCG T YD HLGHAR ++FD++ RYLEH
Sbjct: 1 MAIRIYNTLTRQKEEFKPLREGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V V NFTD+DDKII+RAN+ GE+P L+ R+ + +L DM L+ P PRV++HM+
Sbjct: 61 TVLMVMNFTDIDDKIIKRANETGEDPKELAERFLRIFLEDMKALKVKPADVYPRVTEHMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I + + ++ AY V+F V K +YG+LS +LE+ G RV KRNP D
Sbjct: 121 EIINFVKKLEEKGYAYEGSDGVYFEVRKFKDYGKLSKIKLEDLVKGARVEPGEGKRNPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKKAKPGEPKWESPWGEGRPGWHIECSTMSSKYLGESFDIHGGGNDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V YWMH G + N EKMSKSLGNF T+R++ +RY P +R F++ HYRS
Sbjct: 241 QSEACFGHEWVHYWMHTGFLMVNGEKMSKSLGNFVTVRELLKRYDPEVIRLFVLQRHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+YS ++ A + + +Y TL++ VA+ + + + I R +F+
Sbjct: 301 PLDYSEEGIEHAKNNLERLYNTLENIRVAMGRAEISFRWDEPEFRVYEAIRDARRKFYEA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLN--MLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT+ L F+ +++++N + + + PK+ LRK ++V +
Sbjct: 361 MDDDFNTAEALKAVFE-----VSNAINRYLTEVETPKES------ILRKAWEFFRDVGEV 409
Query: 435 LGLL 438
GL
Sbjct: 410 FGLF 413
>gi|226735064|sp|B8CRG0.1|SYC_SHEPW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|212557514|gb|ACJ29968.1| Cysteinyl-tRNA synthetase [Shewanella piezotolerans WP3]
Length = 459
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/416 (46%), Positives = 255/416 (61%), Gaps = 13/416 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YN++T+QKE F PI GK+GMYVCGVT YDL H+GH R VSFD++ RYL + EV
Sbjct: 2 LKLYNTLTRQKEQFVPIQPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ SL+ R E D L P ++PR + HM +I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCDSLTERLIGEMHRDFDSLNMARPDFEPRATLHMPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ ++I + AYV GDV F+V P YGRLSGQ LE +AG RV V+ KR+P DF
Sbjct: 122 IEMVEKLIAREHAYVAANGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDAKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTKYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLNHYDAATVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN---------K 368
LNYS L A + IY L+D ++ + A+ A +D N +
Sbjct: 302 LNYSEENLKQAKSGLERIYTALKDLDLTVDAAPAEAFIAQFKRAMDDDFNTPEAYSVLFE 361
Query: 369 LRDEFHARMSDDLNTSHILTGAFQ---DALKFINSSLNMLKKKQPKQQQLSLIESL 421
+ E + D+ + L A + D L + ++ K + +++ IE+L
Sbjct: 362 MVREINRLKLTDMQQASALGVALKQLADVLGILGQDVDTFFKGEGSDDEVAEIEAL 417
>gi|308050311|ref|YP_003913877.1| cysteinyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
gi|307632501|gb|ADN76803.1| cysteinyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
Length = 460
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/422 (47%), Positives = 262/422 (62%), Gaps = 30/422 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++T+QKE F PI GKVGMYVCGVT YD H+GHAR V+FD + RYL +V
Sbjct: 2 LQIFNTLTRQKEAFKPIQPGKVGMYVCGVTIYDYCHIGHARTYVAFDTMVRYLRSQGLDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKIIRRA + E+ +L R+ + D L L P +P V+ HM +I
Sbjct: 62 TYVRNITDVDDKIIRRAAENNESCEALVARFTEAMYQDFDALNLLRPDIEPTVTGHMAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+I ++N AYV + GDV+F V+ +YG+LS Q LE ++G RV VD KRNP DF
Sbjct: 122 IDIIQTLVNKGHAYVTDAGDVWFEVKTFDDYGKLSRQDLEQLQSGARVEVDESKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK GEPSW SPWG GRPGWHIECSAM+ +L FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 ALWKSAKPGEPSWTSPWGEGRPGWHIECSAMNGKHLGKVFDIHGGGSDLMFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G V N EKMSKSL NFFTIR++ ++Y ++R+FL+S+HYRS
Sbjct: 242 SCCAHDTNYVNYWVHSGMVQVNKEKMSKSLNNFFTIREVLKQYQAESVRYFLLSSHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEFHAR 376
LNYS L+ A A+ +Y L+ + PA E + N F A
Sbjct: 302 LNYSEENLNQAHAALERLYTALRG----------------VTPATELNLDNDHVARFQAA 345
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M+DD NT+ L F + LN+ K+ +Q L +R + ++G
Sbjct: 346 MNDDFNTAEALPVLFD-----LARELNITKEDGESEQAAQLAGLMRYLGG-------VMG 393
Query: 437 LL 438
LL
Sbjct: 394 LL 395
>gi|381160970|ref|ZP_09870202.1| cysteinyl-tRNA synthetase [Thiorhodovibrio sp. 970]
gi|380879034|gb|EIC21126.1| cysteinyl-tRNA synthetase [Thiorhodovibrio sp. 970]
Length = 466
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/383 (51%), Positives = 243/383 (63%), Gaps = 16/383 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYNS+T+ KE F PI G+ MYVCG+T YDL HLGHAR V FD++YRYL+ V
Sbjct: 2 LHIYNSLTRHKEPFVPIEPGRARMYVCGMTVYDLCHLGHARVLVVFDMVYRYLQQAGYAV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + G L+ R+ D A L PPT +PR + H+++I
Sbjct: 62 TYVRNITDIDDKIIARAAEQGIPIDQLTERFIAAMHEDAARLGVRPPTLEPRATAHIDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I + AYV + GDV++ V YGRLSG+ + RAG RV VD KR+P DF
Sbjct: 122 LAMVQRLIEREHAYVADKGDVYYQVSSFSGYGRLSGKDPGDLRAGARVDVDQHKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP+W+SPWGPGRPGWHIECSAMS L + FDIHGGG DL FPHH+NEIAQ
Sbjct: 182 VLWKAAKPGEPAWESPWGPGRPGWHIECSAMSTQCLGNHFDIHGGGADLQFPHHDNEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMHNG V N+EKMSKSLGNFFT+R+I RY P +R+F++++HYRSP
Sbjct: 242 SEGATGEPFVNIWMHNGFVRINDEKMSKSLGNFFTVREILTRYRPEEIRYFILASHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEFHAR 376
LNY L+ A A+ +Y L+ A PAAE D + R F
Sbjct: 302 LNYDESNLEQARSALTRLYTALRGLPAA-------------EPAAEPDGGDAHRQRFTDA 348
Query: 377 MSDDLNTSHILTGAFQDALKFIN 399
M DD NT L F D + IN
Sbjct: 349 MDDDFNTPEALAVLF-DLAREIN 370
>gi|409095424|ref|ZP_11215448.1| cysteinyl-tRNA ligase [Thermococcus zilligii AN1]
Length = 476
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/412 (45%), Positives = 254/412 (61%), Gaps = 3/412 (0%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +KIYN+ T+QKE F P+ G+V MYVCG T YD +H+GHAR ++FD++ RYLEH
Sbjct: 1 MAIKIYNTQTRQKEEFRPLREGEVRMYVCGPTVYDYTHIGHARTYIAFDVVRRYLEHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V V NFTD+DDKII+RAN+ GE+P L+ ++ + +L DMA L+ P PRV++H+
Sbjct: 61 TVLMVMNFTDIDDKIIKRANETGEDPKELAEKFLRYFLEDMAALKVKPADIYPRVTEHVA 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I ++ AY V+F V + +YG+LSG ++E+ G RV K+NP D
Sbjct: 121 DIIEFIRKLQEKGYAYEGSDGVYFEVRRFKDYGKLSGIKVEDLVKGARVEPGEGKKNPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK AK GEP W SPWG GRPGWHIECS MS YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FVLWKKAKPGEPKWSSPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ A V YWMH G + N EKMSKSLGNF TIR+ +RY P +R F++ HYRS
Sbjct: 241 QTEACTGHEWVRYWMHTGFLMVNGEKMSKSLGNFITIREALKRYDPEVIRLFVLQKHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+Y+ ++ A + + +Y TL++ VA+ + + + A + I + R +F+
Sbjct: 301 PLDYTEEGMEHAKNNLEKLYNTLENIRVAMERAEISFRWEKHEFEAYEAIREARKKFYEA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
M DD NT+ L F+ A +N L + + PK+ L K+ EV
Sbjct: 361 MDDDFNTAEALKAVFE-ASNAVNRYLTQV--ETPKESILRKAWEFFKVVGEV 409
>gi|197120161|ref|YP_002140588.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
gi|226710842|sp|B5EEK6.1|SYC_GEOBB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|197089521|gb|ACH40792.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
Length = 480
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/392 (49%), Positives = 247/392 (63%), Gaps = 14/392 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L++YN++T KE F PI GKVGMYVCGVT YD H+GHARA V FD++YR+L
Sbjct: 1 MPLRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRHLRSKGL 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRN+TD+DDKII RAN G +S R+ +E+ DMA L PT+QP+ ++H+
Sbjct: 61 EVTYVRNYTDIDDKIINRANRDGVPYNEISERFIKEFDNDMARLMLQLPTFQPKATEHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I ++ +I+ AY DVF+ V++ Y +LS + LE+ +AG R+ VD RK +P D
Sbjct: 121 EIIALVQTLIDKGFAYQSGSDVFYRVDRFEGYLKLSKRNLEDMQAGARIDVDERKEHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECSAMS +L DIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKGAKPGEPYWESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YW+HNG V N+EKMSKSLGNFFTI++I E Y LR FL+SAHYRS
Sbjct: 241 QSEAASGKPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEILESYDAEVLRFFLLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC------INKLR 370
P+++S L A + IY+ AL+ E + PA D +
Sbjct: 301 PIDFSDQNLKEAELGLERIYK-------ALAGIYERLASGANTPAGADNAEFVEKVAGFA 353
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSL 402
F M DD NT+ L G D ++ IN L
Sbjct: 354 GRFGDAMDDDFNTALAL-GHLFDLVRVINREL 384
>gi|387129742|ref|YP_006292632.1| cysteinyl-tRNA synthetase [Methylophaga sp. JAM7]
gi|386271031|gb|AFJ01945.1| Cysteinyl-tRNA synthetase [Methylophaga sp. JAM7]
Length = 464
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/375 (50%), Positives = 250/375 (66%), Gaps = 22/375 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+++++KE+F P+ GKV MYVCG+T YDL H+GHAR V FD++ RYL +V
Sbjct: 2 LKIHNTLSKEKEVFKPLQEGKVNMYVCGMTVYDLCHVGHARVMVVFDVVTRYLRASGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + GE +L+ RY E D L L P Y+P+ ++ M +I
Sbjct: 62 TYVRNITDIDDKIIKRATENGETIEALTERYIAEMHRDADALGVLKPDYEPKATESMGEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ +I+ AY + GDV++ V + P+YG+LSG+ + RAGERVAV+ K +P DF
Sbjct: 122 LEMVQTLIDKGLAYTADNGDVYYDVSEFPSYGKLSGRDVNELRAGERVAVNEAKTDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAKAGEP+W+SPWG GRPGWHIECSAMSA+ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKAGEPAWESPWGLGRPGWHIECSAMSANCLGEHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A +V+YWMHNG V ++EKMSKSLGNFFT+R++ E Y A+R+F++S+HYRSP
Sbjct: 242 SEGAHGCQSVNYWMHNGFVRIDDEKMSKSLGNFFTVREVLELYPAEAVRYFILSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC----EVALSPFQEHGKTARINPAAEDCINKLRDEF 373
LNY+ QL+ A A+ Y +L++ EV +E G F
Sbjct: 302 LNYAEDQLEQAKAALTRFYTSLREVQPQEEVRWQEDKEFGP-----------------RF 344
Query: 374 HARMSDDLNTSHILT 388
M DD NT+ L+
Sbjct: 345 KEAMDDDFNTALALS 359
>gi|313201928|ref|YP_004040586.1| cysteinyl-tRNA synthetase [Methylovorus sp. MP688]
gi|312441244|gb|ADQ85350.1| cysteinyl-tRNA synthetase [Methylovorus sp. MP688]
Length = 470
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/378 (51%), Positives = 245/378 (64%), Gaps = 21/378 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK YNS+ ++K+ F PIV GKV MYVCG+T YD HLGHAR V FD++ R+L +V
Sbjct: 16 LKFYNSLAREKQTFVPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRTSGYDV 75
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + GE+ +L++R+ D A L + P +P+ ++H+ +
Sbjct: 76 TYVRNITDIDDKIIKRAQENGESIQALTSRFITAMDEDAARLGVMRPDLEPKATEHITGM 135
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DMI +I AY + GDVF++V YG+LSG+ LE+ RAGERV +D KR+P DF
Sbjct: 136 LDMIAALIEKGFAYPADNGDVFYSVSSFAGYGKLSGKSLEDLRAGERVEIDQYKRDPMDF 195
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEPSWDSPWG GRPGWHIECSAM A +L FDIHGGG DL FPHHENEIAQ
Sbjct: 196 VLWKAAKPGEPSWDSPWGKGRPGWHIECSAMGACHLGPHFDIHGGGQDLQFPHHENEIAQ 255
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+YWMHNG + ++EKMSKSLGNFFTIRQ+ E+Y +R F++ A YRSP
Sbjct: 256 SEAANGCTFVNYWMHNGFIRVDDEKMSKSLGNFFTIRQVLEKYDAEVVRFFILRAQYRSP 315
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ---EHGKTARINPAAEDCINKLRDEFH 374
LNYS LD A A+ +Y L+ +AL F + + AR F
Sbjct: 316 LNYSDHHLDDARQALTRLYTALRG--LALPTFTIDWQQPQAAR---------------FK 358
Query: 375 ARMSDDLNTSHILTGAFQ 392
A M DD NTS F+
Sbjct: 359 AAMDDDFNTSEAFAVLFE 376
>gi|373454259|ref|ZP_09546131.1| cysteine-tRNA ligase [Dialister succinatiphilus YIT 11850]
gi|371935992|gb|EHO63729.1| cysteine-tRNA ligase [Dialister succinatiphilus YIT 11850]
Length = 481
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/424 (46%), Positives = 264/424 (62%), Gaps = 16/424 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T++KE+F PI G+ +YVCGVT Y+ H+G+AR AV++D++ RYLE++ +V
Sbjct: 4 IKVYNTLTKEKEVFKPITPGEAKIYVCGVTPYNHPHIGNARPAVTWDVIRRYLEYVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTDVDDKII +AN G + ++S+RY Y M L PRVS+HM+ I
Sbjct: 64 EFVQNFTDVDDKIINKANAEGTDWKTISDRYIDAYFQVMDALHVRRADVYPRVSEHMDDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
M+ +I AYV+ GDV++ + +YGRLSG+++E+ AG R+ V+ KRNP DFA
Sbjct: 124 IHMVETLIQKGHAYVLGGDVYYDISTFKDYGRLSGRKIEDMLAGARIEVNDEKRNPGDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS HYL FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKAAKPGEPFWESPWGKGRPGWHIECSAMSIHYLGKTFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C C V YW+HNG +T N+EKMSKSL NFF ++ + E+Y ALR+FL+S HYRS
Sbjct: 244 EGCTGCH--FVDYWLHNGFITINSEKMSKSLNNFFLVKDVLEKYSGDALRYFLLSTHYRS 301
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
PL++S +L+ A + L+D V +E + + A E FH
Sbjct: 302 PLDFSDDRLEEAEKNM----DKLKDVIGRVKELSGREGSEVTEASKALEKAAEDDMKVFH 357
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT + TGA + K IN N + + SL K K +L I
Sbjct: 358 EAMDDDFNTG-LATGAMFELAKAINVYYNDVHSGIGFNKA-----SLEKAGKAFKTILDI 411
Query: 435 LGLL 438
LG+L
Sbjct: 412 LGIL 415
>gi|312880084|ref|ZP_07739884.1| cysteinyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
gi|310783375|gb|EFQ23773.1| cysteinyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
Length = 467
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/429 (46%), Positives = 265/429 (61%), Gaps = 9/429 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +YN +T++KE+F P G+V YVCG T YD H+G+AR + FD+L RYLEH
Sbjct: 1 MAFAVYNDLTRRKEVFVPQNPGEVRFYVCGPTVYDFFHIGNARPFIVFDVLRRYLEHQGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
VTYV+NFTDVDDK+IRRA +LG + L+ R+ Y D L T PR ++ +
Sbjct: 61 TVTYVQNFTDVDDKMIRRAAELGISVPELAERFIAAYFEDADALGVRRATVHPRATEEIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I ++I I++ AY VEGDV+F V+ P YG LS Q LE ++G RV VD RKR+P D
Sbjct: 121 AILELIQAILDRGHAYAVEGDVYFDVKSYPAYGVLSKQSLEELQSGARVEVDPRKRHPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA K GEP+W SPWG GRPGWH+ECSAMS +L D HGGG DLIFPHHENEIA
Sbjct: 181 FALWKAQKPGEPAWKSPWGMGRPGWHVECSAMSRRHLGETLDFHGGGCDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YW+HNG++ + EKMSKSLGNF T R+ +R+ PLA+R F++SAHYRS
Sbjct: 241 QSEAATGKPFVRYWVHNGYLMIDKEKMSKSLGNFLTAREARKRFPPLAIRLFMLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S L A+ A + + E AL +A + A + + R+ F A
Sbjct: 301 PINFSEEGLMQATAAQERLRNGWTELEFALG---HRSASAEPDGALRRMLREGRERFLAA 357
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
+ DDLNT+ + F D +K +NSSL ++P L + + EV+++L ILG
Sbjct: 358 LDDDLNTAGAIGVVF-DVVKGVNSSLG----ERP-DADLEALGQAKTFFLEVEDILGILG 411
Query: 437 LLPPGAYSE 445
+ P + E
Sbjct: 412 VAPEESLEE 420
>gi|350552639|ref|ZP_08921836.1| cysteinyl-tRNA synthetase [Thiorhodospira sibirica ATCC 700588]
gi|349793570|gb|EGZ47402.1| cysteinyl-tRNA synthetase [Thiorhodospira sibirica ATCC 700588]
Length = 466
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/421 (47%), Positives = 257/421 (61%), Gaps = 24/421 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYNS+T++K+ F P+ G V MYVCG+T YD HLGHAR V FD++YRYL+ V
Sbjct: 2 LHIYNSLTRKKDPFIPLTPGHVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLQAQGFNV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA E L+ R+ D L LPPT++PR + H++ I
Sbjct: 62 TYVRNITDIDDKIIQRAAQNHEPIEQLTERFIAAMHEDAQALNILPPTHEPRATQHIQPI 121
Query: 139 KDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI Q++ AY D+++AV +YG+LSG++LE+ RAG RV D KR+P DF
Sbjct: 122 LHMIEQLLAKGHAYQASNQDIYYAVNSFKDYGKLSGRQLEDLRAGARVEPDEAKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEPSWDSPWG GRPGWHIECSAMS YL FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKRAKPGEPSWDSPWGLGRPGWHIECSAMSGSYLGQHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMHNG V N EKMSKSLGNFFT+R+I RY +R+F++ +HY+SP
Sbjct: 242 SEASHDCTYVNYWMHNGFVRVNEEKMSKSLGNFFTVREILARYQAEEVRYFILGSHYKSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY QL+ A +A+ +Y L+ + + + +D R FHA M
Sbjct: 302 LNYGDEQLEQARNALTRLYTALRGLD----------RQPPTTQSEQDQTQAYRQRFHAAM 351
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ + +N ++ + P Q L +L ++ ILGL
Sbjct: 352 DDDFNTPEALAVLFE-----LAHEINRVRSQDPAYAQY-LAATLYQLGG-------ILGL 398
Query: 438 L 438
L
Sbjct: 399 L 399
>gi|258513619|ref|YP_003189841.1| cysteinyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
gi|257777324|gb|ACV61218.1| cysteinyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
Length = 500
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/428 (44%), Positives = 271/428 (63%), Gaps = 16/428 (3%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YN++++QKE F P + G+V MYVCG T Y+ HLG+AR V FD + RYL + +V Y
Sbjct: 3 LYNTLSRQKEEFVPAIPGRVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYLIYKGYQVLY 62
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
V+NFTD+DDKII+RA + +P +L+ +Y +EY +D L + P+VSDHM +I +
Sbjct: 63 VQNFTDIDDKIIKRAAEEKLDPSALAFKYTEEYYIDATSLNVMMADIHPKVSDHMAEIIE 122
Query: 141 MITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALW 200
++ +++ AY +GDV+F V + +YG+LSG+ LE+ AG RV V+ +KR+P DFALW
Sbjct: 123 LVEKLVQKGFAYQSDGDVYFEVRRFKDYGKLSGRALEDMLAGARVEVNEKKRDPMDFALW 182
Query: 201 KAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCA 260
KAAK GEPSW+SPWG GRPGWHIECSAMS YL FD+HGGG DLIFPHHENEIAQS A
Sbjct: 183 KAAKPGEPSWNSPWGQGRPGWHIECSAMSLKYLGENFDMHGGGADLIFPHHENEIAQSEA 242
Query: 261 ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNY 320
A + YW+HNG +T N EKMSKSLGNFF +R+I +++ P +R FL+ HYRSPL++
Sbjct: 243 ATGEPLARYWLHNGFITVNQEKMSKSLGNFFLVREILDKFSPEVVRFFLLGTHYRSPLDF 302
Query: 321 -----SVLQ--LDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP------AAEDCIN 367
+V++ LD ++ + + Q V S K AR+ ++
Sbjct: 303 DDEKLAVVEKGLDRIRTSIQLLGEACQRAGVDFSMINAKEKPARVTSIIDTRHSSMKAFI 362
Query: 368 KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES--LRKIE 425
K++ F M DD NT+ + G+ + K N + L K +Q++ L+++ L K+
Sbjct: 363 KIKTSFEQAMEDDFNTA-LAVGSLFELAKETNILVQSLGPKISEQEKACLLQAAELFKLF 421
Query: 426 NEVKEVLR 433
N+V + +
Sbjct: 422 NQVLGIFK 429
>gi|294141771|ref|YP_003557749.1| cysteinyl-tRNA synthetase [Shewanella violacea DSS12]
gi|293328240|dbj|BAJ02971.1| cysteinyl-tRNA synthetase [Shewanella violacea DSS12]
Length = 459
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/421 (47%), Positives = 259/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YNS+T+QKE F PI GK+GMYVCG+T YDL H+GH R VSFD++ RYL + EV
Sbjct: 2 LKLYNSLTRQKEEFKPIQPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RA + E+ SL+ R E D L P ++PR + HM +I
Sbjct: 62 NFQRNITDVDDKIIKRAAENKESCESLTERLIGEMHRDFDALNMKRPDFEPRATLHMPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++I D AYV GDV F+V P YGRLSGQ +E +AG RV V+ KR+P DF
Sbjct: 122 IDMVEKLIEKDHAYVSGNGDVLFSVSSFPEYGRLSGQNIEQLQAGARVEVEDTKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+WDSPWG GRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGAGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A S V+YWMH G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTSYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVLNHYDAGTIRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y +L+ ++++ + A + + K F A M
Sbjct: 302 LNYSEDNLKQAKSALERLYTSLKGLDLSVE-----------SADASEFVAK----FKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F+ + +N +K S I + + ++KE+ +LGL
Sbjct: 347 DDDFNTPEAYSVLFE-----MVREINRVKG--------SDIAAASALGVKLKELAEVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|242036957|ref|XP_002465873.1| hypothetical protein SORBIDRAFT_01g047380 [Sorghum bicolor]
gi|241919727|gb|EER92871.1| hypothetical protein SORBIDRAFT_01g047380 [Sorghum bicolor]
Length = 466
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/353 (54%), Positives = 243/353 (68%), Gaps = 23/353 (6%)
Query: 117 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 176
MA LQCLPPT +PRV++H+E I ++IT+II N Y +EGDV+F+V+ P Y LSG++L
Sbjct: 1 MAALQCLPPTREPRVTEHIEHIIELITKIIQNGHGYAIEGDVYFSVDSFPEYLLLSGRKL 60
Query: 177 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 236
+ NRAGERVAVD+RKRNPADFALWK+AK GEPSW+SPWG GRPGWHIECSAMSAHYL
Sbjct: 61 DQNRAGERVAVDTRKRNPADFALWKSAKEGEPSWESPWGHGRPGWHIECSAMSAHYLGHV 120
Query: 237 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 296
FDIHGGG DLIFPHHENE+AQS AA +S V WMHNG V +++KMSKS NFFTIR I
Sbjct: 121 FDIHGGGRDLIFPHHENELAQSRAAYPESEVICWMHNGFVNKDDQKMSKSENNFFTIRDI 180
Query: 297 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 356
YHP+ALR+FLI HYRS +N+S ++ ASD V+YIY+TL DCE LS + E G +
Sbjct: 181 ISLYHPMALRYFLIRTHYRSDVNHSDKAIEKASDRVYYIYKTLYDCEEMLSKYHEEGISV 240
Query: 357 RINPAAEDCINKLRDEFHARMSDDLNTSHILTG--AFQDALKFINSSLN----------- 403
+ ++ +N+ R F MSDDL T+ +L G D LK INS++N
Sbjct: 241 PVPAEEQNLVNRHRKAFLDNMSDDLKTTDVLDGEDGLTDLLKAINSNMNDLKKLQQKLEQ 300
Query: 404 ----------MLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 446
K++Q ++Q I+ L +E E+K+ L +LGL+PP + SEV
Sbjct: 301 QQKKQQQKKQQQKQQQTQKQPEDYIQGLIALETEIKDKLSVLGLMPPSSLSEV 353
>gi|344995511|ref|YP_004797854.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
gi|343963730|gb|AEM72877.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
Length = 465
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/420 (45%), Positives = 259/420 (61%), Gaps = 15/420 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN+++Q KE F P+ + KV MYVCG T YD H+G+AR + FD L RY E+ EV
Sbjct: 1 MKLYNTLSQTKEEFEPLEKNKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y++NFTDV+DK+I RAN G L+ R+ +EY D L T PR ++ +E +
Sbjct: 61 IYIQNFTDVEDKMINRANKEGITVFELARRFIEEYYKDADRLNVKRATKNPRATEEIEDM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++I+ AYVV+GDV+F K YG+LS + +E AG RV + +K +P DF
Sbjct: 121 IALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEKKEDPLDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+W SPWG GRPGWHIECS M+ YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PL
Sbjct: 241 EAATGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S+ ++ A A+ IY ++ E + Q ++ + + I L+ +F M
Sbjct: 301 NFSIDLIEQAEVALKRIYTCYENLEFLI---QNAASSSESDDKLKAAIEDLKAKFIEAME 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDLNT+ TG + ++ IN+ N K E+L ++ +KE+ ILG+L
Sbjct: 358 DDLNTAEA-TGYLFEMVREINTHANSCSK-----------EALTFAKDTLKELCGILGIL 405
>gi|117923730|ref|YP_864347.1| cysteinyl-tRNA synthetase [Magnetococcus marinus MC-1]
gi|187629846|sp|A0L4P8.1|SYC_MAGSM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|117607486|gb|ABK42941.1| cysteinyl-tRNA synthetase [Magnetococcus marinus MC-1]
Length = 490
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/401 (46%), Positives = 256/401 (63%), Gaps = 13/401 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ + IYN++ ++KE F P++ GKVGMYVCGVT YD SH+GHAR V FD++ R+L
Sbjct: 8 VGITIYNTLGRKKEPFVPMIPGKVGMYVCGVTVYDYSHIGHARVMVVFDVIARHLRVTGF 67
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
++TYVRNFTD+DDKII+RAN+ GE+ +L+ RY + DMA L P +P+ ++H+
Sbjct: 68 DLTYVRNFTDIDDKIIKRANERGESIQTLTQRYIDAFHQDMAALGVQPADIEPKATEHLP 127
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ MI +++ AY GDV++AVE+ NYG+LSG+ L+ AG RV VDS K+NP D
Sbjct: 128 EMMQMIGTLMDKGVAYASGGDVYYAVERFANYGQLSGKVLDEQEAGARVEVDSNKQNPMD 187
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK AK EP WDSPWG GRPGWHIECSAM YL + FDIHGGG DLIFPHHENEIA
Sbjct: 188 FVLWKGAKPEEPQWDSPWGAGRPGWHIECSAMGTKYLGASFDIHGGGRDLIFPHHENEIA 247
Query: 257 QSCAACQDSNVSYWMHNGHVT-----NNNEKMSKSLGNFFTIRQITERYHPLALRHFLIS 311
Q+ V+YW+HNG V +EKMSKSLGNF TIR + Y LR F+++
Sbjct: 248 QTEGCTGQHAVNYWIHNGFVNVVNEEGESEKMSKSLGNFHTIRDLLALYPGEVLRFFILN 307
Query: 312 AHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALS--PFQEHGKTARINPAAEDCINKL 369
+HYRSPL++S L++A + IY L+ + L P G+ A + A L
Sbjct: 308 SHYRSPLDFSFSLLEAAKAGLDRIYTALRSAQALLGKLPGTPIGEPADVPAGAP---QDL 364
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP 410
+ + M DD NT + F+ A K +N++++ ++K P
Sbjct: 365 VENYLKAMDDDFNTPQAIAFLFE-AAKMLNTAIS--EQKDP 402
>gi|302872638|ref|YP_003841274.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
gi|302575497|gb|ADL43288.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
Length = 465
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/420 (45%), Positives = 260/420 (61%), Gaps = 15/420 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN+++Q KE F P+ + KV MYVCG T YD H+G+AR + FD L RY E+ EV
Sbjct: 1 MKLYNTLSQTKEEFEPLEKNKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y++NFTD++DK+I RAN G L+ R+ +EY D L T PR ++ + +
Sbjct: 61 IYIQNFTDIEDKMINRANKEGITVFELAERFIKEYYKDADRLNVKRATKNPRATEEIPDM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++I+ AYVV+GDV+F K YG+LS + +E AG RV + +K +P DFA
Sbjct: 121 IVLIQKLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELVAGARVDLSEKKEDPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+W SPWG GRPGWHIECS M+ YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAKKEGEPAWFSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PL
Sbjct: 241 EAATGKPFARFWIHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S+ ++ A A+ IY ++ E + Q ++ N + I +L+ +F M
Sbjct: 301 NFSLDLIEQAEVALKRIYTCYENLEFLI---QNETSSSENNDKLKTVIEQLKAKFIEAME 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDLNT+ TG + ++ IN+ N K E+L ++ +KE+ ILG+L
Sbjct: 358 DDLNTAEA-TGYLFEMVREINTHANFCSK-----------ETLTFAKDVLKELCSILGIL 405
>gi|289523037|ref|ZP_06439891.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503580|gb|EFD24744.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 475
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/422 (45%), Positives = 272/422 (64%), Gaps = 11/422 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN +T++KE F P+ G++G YVCG T YD H+G+AR V FD L RY+E+
Sbjct: 1 MGLVLYNDLTRRKEEFAPVSPGRIGFYVCGPTVYDYIHIGNARPFVVFDALRRYMEYKGF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV+NFTD+DDK+I +AN LG L+ ++ + Y D+ L T P+ ++H++
Sbjct: 61 EVIYVQNFTDIDDKMINKANQLGITVKELAEQFIEAYFEDIIPLGVRQATVHPKATEHID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I +I++II N AY+++G+V+F V+ PNYG+LSGQ LE +AG R+ VD RKR+P D
Sbjct: 121 DIIRLISRIIENGHAYIIDGNVYFDVKSYPNYGKLSGQSLEELQAGARIEVDERKRHPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKA K GEP WDSPWG GRPGWHIECSAM+ YL DIHGGG DLIFPHHENEIA
Sbjct: 181 FVLWKAKKEGEPWWDSPWGHGRPGWHIECSAMAMKYLGDTIDIHGGGSDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ AA V +W+HNG++ N EKMSKSLGN +R+I + + PLA+R F+++AHYRS
Sbjct: 241 QAEAATGKQFVRFWIHNGYLLINKEKMSKSLGNILNVREIRKNFQPLAVRLFILAAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI-NPAAEDCINKLRDEFHA 375
PL++S L A+ ++ Q L++C L + E + + ED +N F
Sbjct: 301 PLDFSDDSLIQATKSL----QRLRNCYSDLLFYMERSQEKNTPDTWLEDVVNNGYKRFCN 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+ DD NT+ L GA + ++ +N N LK+ + +Q +LI+S E V+ +L ++
Sbjct: 357 ALDDDFNTAGAL-GAVFEVVRDLN---NYLKENETLDKQ-ALIKSKDFFET-VENILGVI 410
Query: 436 GL 437
G+
Sbjct: 411 GI 412
>gi|359396712|ref|ZP_09189763.1| Cysteinyl-tRNA synthetase [Halomonas boliviensis LC1]
gi|357969390|gb|EHJ91838.1| Cysteinyl-tRNA synthetase [Halomonas boliviensis LC1]
Length = 468
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/425 (46%), Positives = 259/425 (60%), Gaps = 28/425 (6%)
Query: 15 MDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHL 74
MD + IYN++T++KE FTP+ GKV MYVCG+T YD HLGHAR V+FD++ RYL
Sbjct: 1 MDSHMHIYNTLTRRKEPFTPLEAGKVSMYVCGMTVYDYCHLGHARVMVAFDIITRYLRER 60
Query: 75 KCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDH 134
+V YVRN TD+DDKI++RA++ GE+ +L+ R D A L LPP+++PR + H
Sbjct: 61 GYDVNYVRNITDIDDKILKRADENGESITALTERMIDAMHEDEARLFVLPPSHEPRATGH 120
Query: 135 MEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRN 193
+E I MI +I AY + GDV++ V K NYG+L+ ++L++ R+G RV VD K +
Sbjct: 121 IEDIVAMIETLIEKGFAYAADNGDVYYRVRKFANYGKLNNRQLDDMRSGARVDVDVHKED 180
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
P DF LWKAAK GE W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHEN
Sbjct: 181 PLDFVLWKAAKPGEAHWASPWGNGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHEN 240
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS AA + V+ WMH G V N EKMSKSLGNFFTIR + + P +R L+++H
Sbjct: 241 EIAQSEAATGKTYVNTWMHAGAVRVNQEKMSKSLGNFFTIRDVLAEHDPEVVRFLLVASH 300
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSP+NYSV L A ++ +Y L+ L P + A D + R+ F
Sbjct: 301 YRSPINYSVDSLTEARKSLTRLYTALE----GLEPGE----------ANRDAASAYRERF 346
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT L F+ + +N K+ QP + K+ E+K++
Sbjct: 347 TQVMDDDFNTPEALAVMFE-----LAREVNRAKQDQPVEAA--------KMAGELKQLGS 393
Query: 434 ILGLL 438
ILGLL
Sbjct: 394 ILGLL 398
>gi|254492695|ref|ZP_05105866.1| cysteinyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
gi|224462216|gb|EEF78494.1| cysteinyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
Length = 463
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/326 (55%), Positives = 233/326 (71%), Gaps = 1/326 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+NS+++QKE F PI GKV MYVCG+T YDL H+GHAR V FD++ RYL L V
Sbjct: 2 LKIHNSLSRQKETFKPITAGKVNMYVCGMTVYDLCHVGHARVMVVFDVVTRYLRALGYNV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + GE +L+ R+ E D L L P +P+ ++ M +I
Sbjct: 62 TYVRNITDIDDKIIKRAAENGETIQALTERFIAEMHQDADALGVLRPDLEPKATESMPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ +I AY + GDV++ V K YG+LSG+++++ RAGER+AV+ K +P DF
Sbjct: 122 LAMVETLIGKGLAYKADNGDVYYDVSKFEAYGKLSGRQVDDLRAGERIAVNEAKTDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP+W+SPWG GRPGWHIECSAMSAH L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKEGEPAWESPWGMGRPGWHIECSAMSAHCLGEHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A +V+YWMHNG V ++EKMSKSLGNFFT+R++ +Y A+R+F++S+HYRSP
Sbjct: 242 SEGAHDCQSVNYWMHNGFVRIDDEKMSKSLGNFFTVREVLAQYPAEAVRYFILSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCE 343
LNY+ QL+ A A+ Y +L+D E
Sbjct: 302 LNYAEDQLEQAKAALTRFYTSLRDVE 327
>gi|336449929|ref|ZP_08620386.1| cysteinyl-tRNA synthetase [Idiomarina sp. A28L]
gi|336283086|gb|EGN76293.1| cysteinyl-tRNA synthetase [Idiomarina sp. A28L]
Length = 460
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/352 (53%), Positives = 234/352 (66%), Gaps = 4/352 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YNS+TQ+KE F PI G+V +YVCGVT YDL H+GHAR V+FD++ RYL +L +V
Sbjct: 2 LKLYNSLTQRKEEFKPIQAGEVKLYVCGVTIYDLCHIGHARTYVAFDVIVRYLRYLGYQV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TDVDDKIIRRA + E+ S++ R+ D L + P +PRV+ HM++I
Sbjct: 62 TFVRNVTDVDDKIIRRAAENNESIDSITERFLGYMHDDFRALNLVEPDIEPRVTTHMQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ Q++ AYV GDV F V P YGRLSGQ LE +AG RVAV K++ DF
Sbjct: 122 IDLVAQLVEKKHAYVASSGDVLFDVSSFPEYGRLSGQNLEQLQAGARVAVTEGKQDQMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKA EPSW+SPWG GRPGWHIECSAM+ +L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKRAKADEPSWESPWGAGRPGWHIECSAMNGKHLGKHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V N EKMSKSLGNFFTIR + Y +R FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVQVNQEKMSKSLGNFFTIRDVLASYAAETVRFFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQ--DCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS LD A ++ IY ++ + E A + +E ARI A D N
Sbjct: 302 LNYSEAHLDQAHASLERIYTAMRGINAETASASVRE-SYEARIREALNDDFN 352
>gi|333367377|ref|ZP_08459646.1| cysteine--tRNA ligase [Psychrobacter sp. 1501(2011)]
gi|332978776|gb|EGK15466.1| cysteine--tRNA ligase [Psychrobacter sp. 1501(2011)]
Length = 508
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/376 (50%), Positives = 241/376 (64%), Gaps = 2/376 (0%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
TLKIY+SMT K F P+ GKVGMYVCG+T YD H+GHAR V+FD++ R+L HL +
Sbjct: 24 TLKIYDSMTTNKRSFEPLQVGKVGMYVCGMTVYDYCHIGHARVMVAFDVVSRWLRHLGFD 83
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
V YVRN TD+DDKII RAN+ GE L+ R+ D A L C P +PR + H++
Sbjct: 84 VNYVRNITDIDDKIIARANENGEEIGQLTERFITAMHEDAAALGCESPDAEPRATQHIDD 143
Query: 138 IKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI + + AY GDV++AV+ YG+LS ++LE+ +AG RV VD+ K+NP D
Sbjct: 144 MLQMIGTLEQKEHAYAASNGDVYYAVDTFEGYGKLSKRKLEDLQAGSRVDVDTDKKNPFD 203
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAKAGEP WDS WG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIA
Sbjct: 204 FVLWKAAKAGEPQWDSSWGGGRPGWHIECSAMSTKCLGNSFDIHGGGHDLQFPHHENEIA 263
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA + + WMH G + + EKMSKSLGNFFTIR++ E++HP +R F++S+HYRS
Sbjct: 264 QSEAATGCTYANNWMHVGFINVDGEKMSKSLGNFFTIREVMEKFHPETIRFFILSSHYRS 323
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC-INKLRDEFHA 375
+N+S L A + +YQ L+ E L A I+ A+ D I F
Sbjct: 324 QVNFSDAALKEAHSGLTRVYQALKAAEAVLDTPVNAQSEATIDTASIDSEIRGYSANFIK 383
Query: 376 RMSDDLNTSHILTGAF 391
M+DD NT ++ F
Sbjct: 384 AMNDDFNTPQAISVLF 399
>gi|253995884|ref|YP_003047948.1| cysteinyl-tRNA synthetase [Methylotenera mobilis JLW8]
gi|253982563|gb|ACT47421.1| cysteinyl-tRNA synthetase [Methylotenera mobilis JLW8]
Length = 466
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/358 (53%), Positives = 239/358 (66%), Gaps = 11/358 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++K+ FTPIV GKV MYVCG+T YD HLGHAR V FD++ R+L V
Sbjct: 2 LKIYNTLAREKQTFTPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVSRWLRASGYNV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RAN+ E L+ R+ D A L L P +P+ ++ ++ +
Sbjct: 62 TYVRNVTDIDDKIIKRANENNETIAQLTQRFIDAMDEDSAKLGVLRPDLEPKATEFVDGM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I+ AY GDVF++V YG+LSG+ LE+ RAGERV VDS K++P DF
Sbjct: 122 LSMIAALIDKGFAYPAANGDVFYSVSSFQGYGKLSGKSLEDLRAGERVEVDSFKKDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEPSW+SPWG GRPGWHIECSAMS+H+L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPSWESPWGKGRPGWHIECSAMSSHHLGQHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAA-------CQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLI 310
S AA CQ V+YWMHNG V ++EKMSKSLGNFFTIR + E+Y +R F++
Sbjct: 242 SEAAHSHDGKPCQ--MVNYWMHNGFVRVDDEKMSKSLGNFFTIRTVLEQYDAEVIRFFIL 299
Query: 311 SAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCIN 367
AHYRSPLNYS L+ A A+ +Y L+ +V+ +H AR A +D N
Sbjct: 300 RAHYRSPLNYSDQHLNDAKLALTRLYTALRGVDVSDDAIDWQHPYAARFKLAMDDDFN 357
>gi|284919700|emb|CAX65477.1| hypothetical protein [Enterobacter hormaechei]
Length = 480
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/380 (49%), Positives = 243/380 (63%), Gaps = 17/380 (4%)
Query: 14 KMDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEH 73
++++ +K+ N++ QKEL P+ K+GMYVCGVT YDL HLGHAR V+FD++ RYL
Sbjct: 17 EVNVMIKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRF 76
Query: 74 LKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSD 133
+VT+VRN TD+DDKII+RA D GE+ SL+ R E +D A L LPP +PR ++
Sbjct: 77 RGYDVTFVRNITDIDDKIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTE 136
Query: 134 HMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKR 192
H+ QI MI ++++ AY+ E GDV F+ + YG+LSGQ + RAG R+ V+ KR
Sbjct: 137 HIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKR 196
Query: 193 NPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHE 252
+P DF LWK AK GEP W SPWG GRPGWHIECSAM+ HYL + FDIHGGG DLIFPHHE
Sbjct: 197 DPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFPHHE 256
Query: 253 NEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 312
NEIAQS +A V+YW+H G VT N EKMSKSL NFFT+R I R+ ++R FL+SA
Sbjct: 257 NEIAQSTSANDGPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDILNRFDAQSVRFFLLSA 316
Query: 313 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 372
HYR PLNYS + A ++ +Y Q + + S ++H + R
Sbjct: 317 HYRKPLNYSEENIHLARASLTRLYTACQFADGSRS--EQH--------------DAWRAR 360
Query: 373 FHARMSDDLNTSHILTGAFQ 392
F M DD NT L F+
Sbjct: 361 FCEAMDDDFNTPQALAILFE 380
>gi|389720629|ref|ZP_10187458.1| cysteinyl-tRNA ligase [Acinetobacter sp. HA]
gi|388609525|gb|EIM38688.1| cysteinyl-tRNA ligase [Acinetobacter sp. HA]
Length = 473
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 259/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G++ +YVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDLYVCGMTVYDYCHIGHARTVVAFDYIIRFLRSQGWQVKY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII+RAN+ GE+ SL++R+ D A L CL P P+ +D+++Q+++
Sbjct: 66 VRNITDIDDKIIKRANENGESISSLTSRFIDAMNEDFAKLGCLAPDAAPKATDYIDQMQN 125
Query: 141 MITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++NN AY GDV+F VEK YGRLSG++LE+ +AG ERV V+ K++P DF
Sbjct: 126 MIDTLVNNGTAYPANNGDVYFEVEKFAKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGADLSFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEAATGEQYVNYWMHAGFINVDGEKMSKSLGNFFTIRDVIEKFHPEVVRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NYS + L A + + Y + + + E + F+A M
Sbjct: 306 VNYSDVALKEAKNTLMRFYHSFKAYQAVYG-----------EQMVETLDQSFVERFNAAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F+ +N LN K Q ++Q +LR + N ILGL
Sbjct: 355 CDDFNTPEAIAVLFE-----LNKELNRAVKDQNQEQAAVYYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|333985593|ref|YP_004514803.1| cysteinyl-tRNA synthetase [Methylomonas methanica MC09]
gi|333809634|gb|AEG02304.1| cysteinyl-tRNA synthetase [Methylomonas methanica MC09]
Length = 471
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/327 (55%), Positives = 230/327 (70%), Gaps = 1/327 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+ K+ F P GKVGMYVCG+T YD H+GHAR V FD + RYL H ++
Sbjct: 16 LKIYNTLTRSKQEFIPRQPGKVGMYVCGMTVYDYCHIGHARVMVVFDTVARYLRHAGYQL 75
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RAN+ GE+ +L+ R+ + D L LPP +P+ + + I
Sbjct: 76 TYVRNVTDIDDKIIQRANENGEDFAALTERFIEAMHEDERALAVLPPDIEPKATQSIADI 135
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+MI +I + AYV GDVF+AV + YG+LSG+ +E+ AGERV VD+ KR+P DF
Sbjct: 136 INMIAALIGREYAYVGANGDVFYAVNRFQGYGKLSGKNIEDLNAGERVDVDNAKRDPLDF 195
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEP W+SPWG GRPGWHIECSAMS L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 196 VLWKMAKPGEPYWESPWGHGRPGWHIECSAMSTCCLGNHFDIHGGGMDLQFPHHENEIAQ 255
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMHNG V N EKMSKSLGNFFT+R + ++Y P +R F++S+HYRSP
Sbjct: 256 SEGATGEPFVNYWMHNGFVRVNEEKMSKSLGNFFTVRDVLKQYRPEVIRFFILSSHYRSP 315
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEV 344
LNYS QLD A A+ +Y L+ ++
Sbjct: 316 LNYSDEQLDDAGVALTRLYTALRGVDI 342
>gi|402779984|ref|YP_006635530.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|402540896|gb|AFQ65045.1| Cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
Length = 471
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/380 (49%), Positives = 243/380 (63%), Gaps = 17/380 (4%)
Query: 14 KMDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEH 73
++++ +K+ N++ QKEL P+ K+GMYVCGVT YDL HLGHAR V+FD++ RYL
Sbjct: 8 EVNVMIKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRF 67
Query: 74 LKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSD 133
+VT+VRN TD+DDKII+RA D GE+ SL+ R E +D A L LPP +PR ++
Sbjct: 68 RGYDVTFVRNITDIDDKIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTE 127
Query: 134 HMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKR 192
H+ QI MI ++++ AY+ E GDV F+ + YG+LSGQ + RAG R+ V+ KR
Sbjct: 128 HIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKR 187
Query: 193 NPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHE 252
+P DF LWK AK GEP W SPWG GRPGWHIECSAM+ HYL + FDIHGGG DLIFPHHE
Sbjct: 188 DPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFPHHE 247
Query: 253 NEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 312
NEIAQS +A V+YW+H G VT N EKMSKSL NFFT+R I R+ ++R FL+SA
Sbjct: 248 NEIAQSTSANDGPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDILNRFDAQSVRFFLLSA 307
Query: 313 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 372
HYR PLNYS + A ++ +Y Q + + S ++H + R
Sbjct: 308 HYRKPLNYSEENIHLARASLTRLYTACQFADGSRS--EQH--------------DAWRAR 351
Query: 373 FHARMSDDLNTSHILTGAFQ 392
F M DD NT L F+
Sbjct: 352 FCEAMDDDFNTPQALAILFE 371
>gi|218885586|ref|YP_002434907.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|226735052|sp|B8DKL0.1|SYC_DESVM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|218756540|gb|ACL07439.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 485
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/434 (45%), Positives = 262/434 (60%), Gaps = 11/434 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++T++KE F P V GKV MYVCG+TAYDL H+GHAR+AV FD+L RYL H +V
Sbjct: 1 MQLYNTLTRKKEHFEPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+ RNFTDVDDKII RAN G ++ +Y + DM L L +PR + H+E++
Sbjct: 61 TFARNFTDVDDKIITRANQEGLTSQEVAEKYIATFYEDMDRLNVLRADLEPRATTHIEEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I D AY GDV+F V P YG+LSG+ +++ R+G RVA K +P DF
Sbjct: 121 ISLCVRLIEQDKAYATPSGDVYFRVRAFPGYGKLSGRDVDDLRSGARVAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEP W+SPWG GRPGWHIECSAMS +L DIHGGG DL+FPHHENEIAQ
Sbjct: 181 ALWKAAKPGEPFWESPWGNGRPGWHIECSAMSEKHLPLPLDIHGGGQDLVFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AA V YW+HNG V N EKMSKSLGNF TIR I E Y P LR+FL++ HYRSP
Sbjct: 241 TEAALGKDFVRYWVHNGFVQVNAEKMSKSLGNFRTIRDILENYLPETLRYFLLTKHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++++ +D A + IY+ L L +E + + + LR F M
Sbjct: 301 IDFTFESMDEAEKNLKRIYEALGLLHAELE--REKWTSGPLPKDVTEEFEGLRQAFADAM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD+NT+ L F ++ N L+ K Q K + R + +E +LG+
Sbjct: 359 EDDMNTAAALGHVFT-MVRLANRILD--NKGQRKTEGARAF--FRAVLDEAATWFAVLGV 413
Query: 438 L---PPGAYSEVKT 448
P G +E++
Sbjct: 414 FGREPAGFLAELRA 427
>gi|269798076|ref|YP_003311976.1| cysteinyl-tRNA synthetase [Veillonella parvula DSM 2008]
gi|269094705|gb|ACZ24696.1| cysteinyl-tRNA synthetase [Veillonella parvula DSM 2008]
Length = 482
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/429 (45%), Positives = 275/429 (64%), Gaps = 25/429 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+MT+QKE+F P+ G+ MYVCGVT Y+ H+G+AR V++D++ RY++H+ +V
Sbjct: 4 ITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G + +++NRY Y M L PRVS H+E I
Sbjct: 64 TYVQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDALGVQRADIYPRVSTHIEDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI +I+ AY ++GDV+++VEK +YG LSG+ L++ AG R+ VD RK+NP DFA
Sbjct: 124 ITMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C+ Q +V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRS
Sbjct: 244 EGCSG-QHPSVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL------- 369
PL++S +L+ A+ ++L+ A+ + P A D +L
Sbjct: 303 PLDFSDERLEEAN-------KSLERLSTAIENLL---YLEKCEPGACDEAQRLLEKAKEY 352
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
+EF A MSDD NT+ + F + +N+ + ++ + E++ +++ K
Sbjct: 353 EEEFEAAMSDDFNTALATSSMFG-----LAKEINIYYQAVTSREGVVCQEAIAEVKRIFK 407
Query: 430 EVLRILGLL 438
+ ++G+L
Sbjct: 408 FMTDVIGVL 416
>gi|302039377|ref|YP_003799699.1| cysteinyl-tRNA synthetase [Candidatus Nitrospira defluvii]
gi|300607441|emb|CBK43774.1| Cysteinyl-tRNA synthetase [Candidatus Nitrospira defluvii]
Length = 486
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/430 (45%), Positives = 269/430 (62%), Gaps = 31/430 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L++YN+++ KE F P+V GKV MYVCGVT YD H+GHAR+A+ FD+L RYLE+ V
Sbjct: 2 LRLYNTLSGSKEPFEPLVPGKVRMYVCGVTVYDYCHIGHARSALVFDVLRRYLEYSGFVV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ +NFTDVDDKII+RA + G + ++ Y Y DM L T +PR ++H+ +I
Sbjct: 62 EFAKNFTDVDDKIIKRAKEQGVSCEHVTTTYINAYYEDMEKLGVRRATLEPRATEHIAEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ ++ AY V+GDV+F V++ YGRLS + +++ +AG RV VD RKR+P DFA
Sbjct: 122 VRLVDTLLAKGMAYRVDGDVYFQVDRYAVYGRLSKRNVDDLQAGARVDVDERKRHPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK +K GEPSWDSPWG GRPGWHIECSAM+ +L FDIHGGG+DLIFPHHENEIAQS
Sbjct: 182 LWKGSKPGEPSWDSPWGQGRPGWHIECSAMAMRHLGETFDIHGGGMDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYH------PLALRHFLISA 312
C A YW+HNG V N EKMSKSLGNFFTIR+I ++ LR+FL++
Sbjct: 242 CGATGKEFARYWVHNGFVQINQEKMSKSLGNFFTIREIFQKSEWPDTVTGEMLRYFLLTT 301
Query: 313 HYRSPLNYSVLQLDSASDAV--FY-IYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL 369
HYRSPL++S L A +A+ FY +++ L + SP + + ++ + +
Sbjct: 302 HYRSPLDFSDQSLKEAKNALNGFYDLFERLNESAPVHSPGDQ---------SMQEAMVRT 352
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK-IENEV 428
R+ F A M DDLNT + L ++L ML+ K + L +R+ + E
Sbjct: 353 REAFVAAMDDDLNTPNAL------------AALQMLRGDTNKALEAGLSGEMRQMVRQEF 400
Query: 429 KEVLRILGLL 438
+ + +LGLL
Sbjct: 401 RALGIVLGLL 410
>gi|157374677|ref|YP_001473277.1| cysteinyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
gi|187631638|sp|A8FTH6.1|SYC_SHESH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|157317051|gb|ABV36149.1| Cysteine--tRNA ligase [Shewanella sediminis HAW-EB3]
Length = 459
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/422 (46%), Positives = 262/422 (62%), Gaps = 31/422 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YNS+T+QKE F P+ GKVGMYVCG+T YDL H+GH R VSFD++ RYL + +V
Sbjct: 2 LKLYNSLTRQKEEFKPLQPGKVGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
++RN TDVDDKII+RAN+ E+ SL+ R E D L P ++PR + H+ +I
Sbjct: 62 NFLRNITDVDDKIIKRANENKESCESLTERLIGEMHRDFDALNMKRPDFEPRATLHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++I + AYV GDV F+V P YGRLSGQ L+ +AG RV V+ KR+P DF
Sbjct: 122 IDMVEKLIEKEHAYVSGNGDVLFSVSSFPEYGRLSGQNLDQLQAGARVEVEDTKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSL NFFTIR + E Y +R+FL+S HYRS
Sbjct: 242 SCCAHNTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLEHYDAATVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y +L+ ++++ +A++ + K F M
Sbjct: 302 LNYSEDNLKQAKSALERLYTSLKGLDLSVEA-----------ASADEYVAK----FKVAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKK-KQPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT + F+ + +N LK+ K L + ++KE+ +LG
Sbjct: 347 DDDFNTPEAYSVLFE-----MVREINRLKEADNAKASSLGV---------KLKELADVLG 392
Query: 437 LL 438
+L
Sbjct: 393 IL 394
>gi|406912438|gb|EKD52050.1| hypothetical protein ACD_62C00126G0006 [uncultured bacterium]
Length = 530
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/449 (42%), Positives = 278/449 (61%), Gaps = 23/449 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T++KE F P+ GKVGMY CGVT YD HLG+ARA V+FD+L+RYL+++ +V
Sbjct: 49 LTLYNTLTRKKEEFKPLTDGKVGMYACGVTVYDYCHLGNARAMVNFDVLHRYLKYVGYDV 108
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKIIR+AN + ++++Y + D L + PT +PR +DH+ I
Sbjct: 109 TFVRNFTDVDDKIIRKANAENISCSEVTSKYIAAFYEDTNALGLVNPTIEPRATDHIPDI 168
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++++ AY + GDVF+AV P YG+LSG+ +E+ +G RV V K++P DFA
Sbjct: 169 IAIINKLVDKGLAYQIGGDVFYAVRSFPQYGKLSGKNIEDLESGARVDVSDVKKDPLDFA 228
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK EP W SPWG GRPGWHIECSAMS YL FDIH GG DLIFPHHENEIAQS
Sbjct: 229 LWKSAKPNEPKWPSPWGEGRPGWHIECSAMSTKYLGDTFDIHCGGCDLIFPHHENEIAQS 288
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A +W+HNG + ++EKMSKSLGNFFT R++ +++ A+RHF++SAHYRSP+
Sbjct: 289 EGATGKPFARFWVHNGFLNIDSEKMSKSLGNFFTTREVLKKFPAEAIRHFILSAHYRSPI 348
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALS-------PFQEHGKTARINPAAEDCINKLRD 371
+YS + + A+ YQT E + P Q+H PA + L++
Sbjct: 349 DYSEKNISDSIKALERFYQTKSRLEKFIQQPSDPAIPSQQH------VPAK---LENLKN 399
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
EF + DDLNT+ ++ F+ ++ + ++ + + Q+ + I N++ +V
Sbjct: 400 EFIMALDDDLNTAMVMGLVFE----WVRTWNKLIDENRANQKD---AKDFLDIINDIHKV 452
Query: 432 LRILGLLPPGAYSEVKTAFLVLLHVFFDD 460
L + G E+K + L V +D
Sbjct: 453 LGVFGSDANAYLDELKQKGMAGLLVLEED 481
>gi|448747541|ref|ZP_21729198.1| Cysteinyl-tRNA synthetase, class Ia [Halomonas titanicae BH1]
gi|445564821|gb|ELY20936.1| Cysteinyl-tRNA synthetase, class Ia [Halomonas titanicae BH1]
Length = 468
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/425 (45%), Positives = 259/425 (60%), Gaps = 28/425 (6%)
Query: 15 MDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHL 74
MD + IYN++T++KE FTP+ GKV MYVCG+T YD HLGHAR V+FD++ RYL
Sbjct: 1 MDSHMHIYNTLTRRKEPFTPLEAGKVSMYVCGMTVYDYCHLGHARVMVAFDVITRYLRER 60
Query: 75 KCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDH 134
+V YVRN TD+DDKI++RA++ GE+ +L+ R D A L LPP+++PR + H
Sbjct: 61 GYDVNYVRNITDIDDKILKRADENGESITALTERMIDAMHEDEARLFVLPPSHEPRATGH 120
Query: 135 MEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRN 193
++ I MI +I AY + GDV++ V K +YG+L+ ++L++ RAG RV VD K +
Sbjct: 121 IDDIVAMIETLIEKGFAYAADNGDVYYRVRKFADYGKLNNRQLDDMRAGSRVDVDVHKED 180
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
P DF LWKAAK GE W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHEN
Sbjct: 181 PLDFVLWKAAKPGEAHWASPWGNGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHEN 240
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS AA + V+ WMH G V N EKMSKSLGNFFTIR + + P +R L+++H
Sbjct: 241 EIAQSEAATGKTYVNTWMHAGAVRVNQEKMSKSLGNFFTIRDVLAEHDPEVVRFLLVASH 300
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSP+NYSV L A ++ +Y L+ E + A D + R+ F
Sbjct: 301 YRSPINYSVDSLTEARKSLTRLYTALEGLE--------------LGAANSDDASAYRERF 346
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT L F+ + +N K++QP + K+ E+K++
Sbjct: 347 TQVMDDDFNTPEALAVMFE-----LAREVNRAKQEQPNEAA--------KLAGELKQLGS 393
Query: 434 ILGLL 438
+LGLL
Sbjct: 394 VLGLL 398
>gi|417954102|ref|ZP_12597142.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|342816142|gb|EGU51047.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 460
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/350 (52%), Positives = 237/350 (67%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GK+GMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++++++I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEYIKEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +I AYV + GDV F + K YG+LSGQ LE +AG RV ++S KR+ DF
Sbjct: 122 IELVETLIERGFAYVADNGDVMFEIAKYDEYGKLSGQDLEQLQAGARVEIESAKRSSLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L+ A A+ +Y +L+ ++ +S AR N A D N
Sbjct: 302 LNYSEDNLNQARSALERLYTSLRGLDLTVSAVGGEEYVARFNDAMNDDFN 351
>gi|157962505|ref|YP_001502539.1| cysteinyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
gi|187631637|sp|A8H617.1|SYC_SHEPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|157847505|gb|ABV88004.1| cysteinyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
Length = 459
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/419 (47%), Positives = 256/419 (61%), Gaps = 26/419 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YNS+T+QKE F P+ GKVGMYVCGVT YDL H+GH R VSFD++ RYL + +V
Sbjct: 2 LKLYNSLTRQKEQFVPLQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ SL+ R E D L P +PR + HM +I
Sbjct: 62 NFQRNITDVDDKIIKRANENKESCDSLTERLIAEMHRDFDALNMARPDNEPRATLHMPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ ++I + AYV GDV F+V P YGRLSGQ LE +AG RV V+ KR+P DF
Sbjct: 122 IEMVEKLIEREHAYVASNGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDAKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLGHYDATTVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A + IY L+D ++ T PA E +F + M
Sbjct: 302 LNYSEDNLKQAKSGLERIYTALKDLDL----------TVEAAPAEE-----FVAKFKSAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT + F D ++ IN + K ++ +L ++ +VL ILG
Sbjct: 347 DDDFNTPEAYSVLF-DMVREIN---------RLKATDMAKASALGVALKQLADVLGILG 395
>gi|237808667|ref|YP_002893107.1| cysteinyl-tRNA synthetase [Tolumonas auensis DSM 9187]
gi|259511845|sp|C4LG04.1|SYC_TOLAT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|237500928|gb|ACQ93521.1| cysteinyl-tRNA synthetase [Tolumonas auensis DSM 9187]
Length = 463
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/427 (47%), Positives = 260/427 (60%), Gaps = 40/427 (9%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R V+FD++ RYL +L +V
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVVRYLRYLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TDVDDKII+RA + E+ +L+ R + D L+ P +PR + H+ +I
Sbjct: 62 TFVRNITDVDDKIIKRAAENAESCDALTERLIGDMHADFDALKLQRPDIEPRATQHIGEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +++ + AYV + GDV F+++ P YGRLSGQ +E +AG RV V+ KRNP DF
Sbjct: 122 ITLVQSLLDQNYAYVADSGDVLFSIDSFPEYGRLSGQNIEQLQAGARVDVEESKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP WDSPWG GRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPMWDSPWGAGRPGWHIECSAMNSKHLGHHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRSP
Sbjct: 242 SCCAHHTPYVNTWMHSGMVMVDEEKMSKSLGNFFTIRDVLKVYDAETVRYFLMSGHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCE-----VALS-PFQEHGKTARINPAAEDCINKLRD 371
LNYS L L A ++ +Y L+ E ALS PF E
Sbjct: 302 LNYSDLNLQQARASLERLYTALRGVEDGEEQAALSAPFDE-------------------- 341
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F A M DD NT + F + LN K+ P ++L LR++
Sbjct: 342 RFKAAMDDDFNTPEAYSVLFD-----LARDLNRAKQDSPA-DAVALAACLRRLGG----- 390
Query: 432 LRILGLL 438
+LGLL
Sbjct: 391 --VLGLL 395
>gi|121996916|ref|YP_001001703.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
gi|187629827|sp|A1WT89.1|SYC_HALHL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|121588321|gb|ABM60901.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
Length = 459
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/428 (47%), Positives = 259/428 (60%), Gaps = 32/428 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+NS+T KE F PI G+V +YVCG+T YD HLGHARA V FD + RYL L EV
Sbjct: 2 LKIHNSLTGAKEPFQPIEPGQVRIYVCGMTVYDFCHLGHARALVVFDAVVRYLRWLGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + GE +L++R+ + D + L PP ++PR ++ +E +
Sbjct: 62 TYVRNITDIDDKIIRRAAENGEPMTALTDRFIRAMHEDCSALGVEPPDHEPRATERLESM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++I AYV + GDV+F+V P YG+LSG+R+E R+G R+ D K +P DF
Sbjct: 122 IALIEELIAGGHAYVGDNGDVYFSVASFPEYGKLSGRRVEELRSGSRIEPDEAKHDPVDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK+GEP+W SPWG GRPGWHIECSAMS L S FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKAAKSGEPAWPSPWGDGRPGWHIECSAMSRDLLGSHFDIHGGGVDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMHNGHV ++EKM+KSLGNFFT+R + + +R FL+S+HYRSP
Sbjct: 242 SECASGHRFVNYWMHNGHVRIDDEKMAKSLGNFFTVRDVLAEHPAEVVRLFLLSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ LD A + +Y L+ PAA ++ R+ F M
Sbjct: 302 LNYTGDALDEARGGLERLYNALRGL-----------------PAAAPARSQARERFREAM 344
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F A +N L++ S LR E+ +LGL
Sbjct: 345 DDDFNTREALAVLFDGA-----REINRLREAGDASGAASAAAELR-------ELGAVLGL 392
Query: 438 LP--PGAY 443
L P AY
Sbjct: 393 LQQDPEAY 400
>gi|374335348|ref|YP_005092035.1| cysteinyl-tRNA synthetase [Oceanimonas sp. GK1]
gi|372985035|gb|AEY01285.1| cysteinyl-tRNA synthetase [Oceanimonas sp. GK1]
Length = 459
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/367 (52%), Positives = 238/367 (64%), Gaps = 19/367 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F P+V GKVGMYVCGVT YDL H+GH R V+FD++ RYL + ++
Sbjct: 2 LKIYNSLTRQKEEFKPLVPGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVTRYLRYAGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ +L+ R E D L P +P+ + H+ +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDALTERLTAEMYRDFDALNIARPDIEPKATGHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ +I + AYV + GDV F V +YGRLSGQ LE +AG RV V+ KRNP DF
Sbjct: 122 IAMVDTLIKDGHAYVADNGDVLFEVNSFADYGRLSGQNLEQLQAGARVEVEQSKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSWDSPWGPGRPGWHIECSAM+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKQSKPGEPSWDSPWGPGRPGWHIECSAMNGKHLGKHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRS
Sbjct: 242 SCCANHSPYVNTWMHSGMVMVDQEKMSKSLGNFFTIRDVLKHYDGETIRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
LNYS L A A+ +Y L+D EVA + ED + + F A
Sbjct: 302 LNYSDENLKQARTALERLYTALRDLPEVAAA-------------GGEDFVAR----FTAA 344
Query: 377 MSDDLNT 383
M DD NT
Sbjct: 345 MDDDFNT 351
>gi|352101164|ref|ZP_08958587.1| cysteinyl-tRNA synthetase [Halomonas sp. HAL1]
gi|350600648|gb|EHA16709.1| cysteinyl-tRNA synthetase [Halomonas sp. HAL1]
Length = 468
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/425 (45%), Positives = 259/425 (60%), Gaps = 28/425 (6%)
Query: 15 MDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHL 74
MD + IYN++T++KE FTP+V GKV MYVCG+T YD HLGHAR V+FD++ RYL
Sbjct: 1 MDSHMHIYNTLTRRKEPFTPLVAGKVSMYVCGMTVYDYCHLGHARVMVAFDVITRYLRER 60
Query: 75 KCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDH 134
+V YVRN TD+DDKI++RA++ GE+ +L+ R D A L LPPT++PR + H
Sbjct: 61 GYDVNYVRNITDIDDKILKRADENGESITALTERMIAAMHEDEARLFVLPPTHEPRATGH 120
Query: 135 MEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRN 193
++ I MI +I AY + GDV++ V K NYG+L+ ++L++ R+G RV VD K +
Sbjct: 121 IDDIVAMIETLIAKGFAYAADNGDVYYRVRKFANYGKLNNRQLDDMRSGARVDVDVHKED 180
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
P DF LWKAAK GE W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHEN
Sbjct: 181 PLDFVLWKAAKPGEAHWSSPWGNGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHEN 240
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS AA + V+ WMH G V N EKMSKSLGNFFTIR + + P +R L+++H
Sbjct: 241 EIAQSEAATGKTYVNTWMHAGAVRVNKEKMSKSLGNFFTIRDVLAEHDPEVVRFLLVASH 300
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSP+NYSV L A ++ +Y L+ + + A + R+ F
Sbjct: 301 YRSPINYSVDSLTEARKSLTRLYTALEGVDT--------------DAIASSEASPYRERF 346
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT L F+ + +N K++QP + ++ E+K++
Sbjct: 347 TQVMDDDFNTPEALAVMFE-----LAREVNRAKQEQPDEAA--------RLGGELKQLGA 393
Query: 434 ILGLL 438
ILGLL
Sbjct: 394 ILGLL 398
>gi|427414123|ref|ZP_18904313.1| cysteine-tRNA ligase [Veillonella ratti ACS-216-V-Col6b]
gi|425714499|gb|EKU77502.1| cysteine-tRNA ligase [Veillonella ratti ACS-216-V-Col6b]
Length = 484
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/423 (47%), Positives = 273/423 (64%), Gaps = 12/423 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN+MT++KE+F P+ G+ +YVCGVT Y+ H+G+AR V++D++ RYL H+ +V
Sbjct: 4 IKVYNTMTREKEVFKPVKEGEAKIYVCGVTPYNHPHIGNARPFVTWDVIRRYLTHVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G + +++NRY Y M L PRVS+H+++I
Sbjct: 64 TYVQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDALHVRHADVYPRVSEHIDEI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI+ +I AY ++GDV+++VEK +YG+LSG+ L++ AG RV VD RK+NP DFA
Sbjct: 124 IAMISTLIEKGFAYELDGDVYYSVEKFEDYGKLSGRTLDDMEAGARVDVDDRKQNPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEP W+SPWG GRPGWHIECS MS YL +FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKSAKPGEPYWESPWGNGRPGWHIECSTMSNKYLGEEFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C S V YW+HNG +T N EKMSKSL NFF ++ I + Y P ALR+FL+S HYRS
Sbjct: 244 EGCTGHHPS-VRYWLHNGFITINQEKMSKSLNNFFLVKDILKEYSPDALRYFLMSTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL++S +L+ A+ ++ + +Q+ + QE G+ A D K +EF
Sbjct: 303 PLDFSDERLEEANKSLERMTTAIQN--LLYLENQEEGECDEEAKALLDNARKYAEEFEEA 360
Query: 377 MSDDLNTSHILTGAFQDAL-KFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
MSDD NT+ L GA L K IN ++ K E+L ++ N K + I+
Sbjct: 361 MSDDFNTA--LAGAPMFGLAKEINIYYQAVQNCNGKVCH----ETLAEVRNIFKMMTDII 414
Query: 436 GLL 438
G+L
Sbjct: 415 GIL 417
>gi|269792622|ref|YP_003317526.1| cysteinyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100257|gb|ACZ19244.1| cysteinyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 468
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/425 (45%), Positives = 263/425 (61%), Gaps = 18/425 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ ++YN +T +KE F P+ GKV YVCG T YD H+G+AR + FD++ RYLEHL
Sbjct: 1 MAFEVYNDLTNRKEPFVPLEEGKVRFYVCGPTVYDYFHIGNARPFIVFDVMRRYLEHLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYV+NFTD+DDK+I+RA ++G L++R+ + Y D L T P+ ++ +
Sbjct: 61 QVTYVQNFTDIDDKMIKRAQEMGITVKELADRFIEAYYQDADALGIRRATVNPKATEEIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I ++I +I AY ++GDV+F V P YG+L Q LE ++G RV VD RKR+P D
Sbjct: 121 HIIELIELLIQKGHAYQIDGDVYFDVMSYPPYGKLIKQDLEELQSGARVEVDPRKRHPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA K GEP+WDSPWGPGRPGWHIECSAM H+L D HGGG DL+FPHHENEIA
Sbjct: 181 FALWKAQKPGEPAWDSPWGPGRPGWHIECSAMCRHHLGDTIDFHGGGCDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YW+HNG++ + EKMSKSLGNF T R + +R+ PL +R F++SAHYRS
Sbjct: 241 QSEAATGKPFVRYWVHNGYLMIDKEKMSKSLGNFMTARDLMKRFPPLVIRLFMLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALS---PFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L A A+ + AL P + R + I + RD+F
Sbjct: 301 PINFSEENLRQAQAALERLRNGWAQIRFALDNPPPSTSESRELR------EQIARYRDDF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
H M DDLNT+ L GA ++ NS L+ + P + +L + N +++V R
Sbjct: 355 HRAMDDDLNTAEAL-GAVFSLIRATNSHLS--RGDSPD------LAALEEASNFLRDVDR 405
Query: 434 ILGLL 438
I+G++
Sbjct: 406 IMGVI 410
>gi|337284525|ref|YP_004623999.1| cysteinyl-tRNA synthetase [Pyrococcus yayanosii CH1]
gi|334900459|gb|AEH24727.1| cysteinyl-tRNA synthetase [Pyrococcus yayanosii CH1]
Length = 476
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/424 (44%), Positives = 258/424 (60%), Gaps = 13/424 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ + +YN++T++KE F P+ +G+V MYVCG T YD HLGHAR ++FD++ RYLEH
Sbjct: 1 MVIMVYNTLTKRKEEFKPLRKGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V V NFTD+DDKII+RA + GE+P L+ ++ + +L DMA L+ P PRV++H+
Sbjct: 61 TVLMVMNFTDIDDKIIKRAQETGEDPKELAEKFIRVFLEDMAALKVKPADVYPRVTEHVN 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I I ++ AY V+F V K YG+LSG ++E + G RV K+NP D
Sbjct: 121 DIIAFIERLEEKGYAYEGSDGVYFEVSKFKEYGKLSGIKVEELKKGARVEPGEGKKNPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECSAMS+ YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKKAKPGEPKWESPWGEGRPGWHIECSAMSSKYLGESFDIHGGGNDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V YW+H G V EKMSKSLGNF T+R++ +RY P +R F++ HYRS
Sbjct: 241 QSEACFGHEWVRYWLHTGFVMVKGEKMSKSLGNFVTVRELLQRYSPEVIRFFVLQKHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+Y+ L A + + +Y TL++ VA+ + + I + R +F+
Sbjct: 301 PLDYTEEGLMHAKNNLERLYNTLENIRVAMERVELAYTWGEEEFELYEVIKEGRRKFYEA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLN--MLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT+ L F+ +++++N + K ++PK+ LRK K V +
Sbjct: 361 MDDDFNTAEALKAVFE-----VSNAVNRYLTKVERPKES------VLRKAWEFFKAVSEV 409
Query: 435 LGLL 438
GL
Sbjct: 410 FGLF 413
>gi|375084700|ref|ZP_09731560.1| cysteine-tRNA ligase [Megamonas funiformis YIT 11815]
gi|374567947|gb|EHR39145.1| cysteine-tRNA ligase [Megamonas funiformis YIT 11815]
Length = 474
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/422 (46%), Positives = 265/422 (62%), Gaps = 14/422 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YN++T+QKE F P+ G+V +YVCGVT Y+ H+G+AR V++D++ RY HL +V
Sbjct: 2 LKVYNTLTKQKEEFKPLKEGQVSIYVCGVTPYNHPHIGNARPFVTWDVIKRYFTHLGYKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTDVDDKIIR AN G N +S RY Y M L P+VS + +I
Sbjct: 62 KHIQNFTDVDDKIIRTANQEGVNWSDISTRYINSYFEVMDKLHVKHADIYPKVSQTIPEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
DMI+ +I+ AY + GDV+F+VEK YG+LSG++LE+ AG R+ V+ K NP DFA
Sbjct: 122 IDMISVLIDKGYAYELNGDVYFSVEKFKGYGKLSGRKLEDMMAGARIEVNESKHNPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECS MS YL FD HGGG DLIFPHHENEIAQS
Sbjct: 182 LWKAAKPGEPFWESPWGNGRPGWHIECSTMSLKYLGKTFDFHGGGSDLIFPHHENEIAQS 241
Query: 259 CAACQD--SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
A C D S YW+HNG +T N EKMSKSLGNFFT+++I ++Y LR F++S HYRS
Sbjct: 242 QAYCGDDHSFARYWLHNGFITINQEKMSKSLGNFFTVKEILDKYPAEVLRFFIVSTHYRS 301
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK---LRDEF 373
PL++S +LD A+ +L + AL +E K + E+ I K + F
Sbjct: 302 PLDFSDARLDEAT-------TSLNRLKNALDNLKELAKNTTDATSGEELIAKAKQCKQNF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT+ + F D K IN N + + ++++ +L + +E+ +++
Sbjct: 355 FEAMDDDFNTALAIANMF-DLSKEINIYYNEVTSGKVACSKVAVDTAL-DVFSEMADIIG 412
Query: 434 IL 435
IL
Sbjct: 413 IL 414
>gi|348026620|ref|YP_004766425.1| cysteinyl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
gi|341822674|emb|CCC73598.1| cysteinyl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
Length = 481
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/421 (47%), Positives = 264/421 (62%), Gaps = 8/421 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YN++T++KE F P+ G+V MYVCG+T Y+ SH+G+AR V++D++ RYLEHL EV
Sbjct: 4 LKVYNTLTRKKETFVPVTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLEHLGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+++NFTDVDDKII AN G ++SNRY Y M L PRVS+HM++I
Sbjct: 64 THIQNFTDVDDKIINAANGEGVTWDTISNRYIASYFEVMDKLHIRRADKYPRVSEHMDEI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
M+ +I+ AYV++ DV+++VEK +YG LSG+ L++ AG R+ VD RK NP DFA
Sbjct: 124 IHMVQTLIDKGYAYVIDHDVYYSVEKFNDYGELSGRSLDDMMAGARIEVDDRKHNPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEPSWDSPWG GRPGWHIECSAMS YL FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKGAKPGEPSWDSPWGKGRPGWHIECSAMSNKYLGDTFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 CA-ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
A + V YW+HNG +T N+EKMSKSL NFF ++ + E Y P ALR FLIS HYRSP
Sbjct: 244 EAFTGKKPMVKYWLHNGFITINSEKMSKSLNNFFLVKDVLEHYSPDALRFFLISNHYRSP 303
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L++S +L+ + ++ + T D + L K+ E +K + F M
Sbjct: 304 LDFSDERLEEMTRSLERL-GTAIDNVLELLAMPAGAKSPEAQQLLE-TAHKDEEAFENAM 361
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + + A D K +N N + +L E ++ K ILG+
Sbjct: 362 CDDFNTA-LASAAMFDLAKNVNIFKNAVVNNGVPVDSAALSE----VKRVFKTFTDILGI 416
Query: 438 L 438
L
Sbjct: 417 L 417
>gi|423080651|ref|ZP_17069270.1| cysteine--tRNA ligase [Clostridium difficile 002-P50-2011]
gi|423085098|ref|ZP_17073555.1| cysteine--tRNA ligase [Clostridium difficile 050-P50-2011]
gi|357550746|gb|EHJ32555.1| cysteine--tRNA ligase [Clostridium difficile 050-P50-2011]
gi|357552715|gb|EHJ34482.1| cysteine--tRNA ligase [Clostridium difficile 002-P50-2011]
Length = 467
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/422 (45%), Positives = 267/422 (63%), Gaps = 12/422 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+++K+YN++T+ KE F P+ GKV MYVCG T Y+ H+G+AR + FD L RYLE+
Sbjct: 1 MSVKVYNTLTRAKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYV+NFTDVDDKII R+++ G +P ++ +Y +EY VD L T P+V+D+++
Sbjct: 61 DVTYVQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
QI + I ++ + AY V GDV+F K YG+LSGQ+ E+ AG R+ V+ +KR+P D
Sbjct: 121 QIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIA
Sbjct: 181 FVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ N+EKMSKS GNFFT+R I++ Y +R F++SAHYR+
Sbjct: 241 QSEARSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S L+ A + +Y T + E LS E T + ++ N R +F
Sbjct: 301 PVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEIELVKELDN-FRQKFIDA 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD+NT+ ++ F+ A K INS+++ + S +E +K +E E+ +L
Sbjct: 360 MDDDVNTADAVSVIFELA-KLINSNVD----------ENSSLEFAKKCLDEFNELTGVLN 408
Query: 437 LL 438
++
Sbjct: 409 IV 410
>gi|406928420|gb|EKD64226.1| hypothetical protein ACD_51C00046G0015 [uncultured bacterium]
Length = 462
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/423 (44%), Positives = 269/423 (63%), Gaps = 16/423 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TLK+ N+++ +KE F PI VGMYVCG T YD HLGH R+AV FD++ +YL++
Sbjct: 1 MTLKVKNTLSGKKEEFKPIKDNHVGMYVCGPTVYDFGHLGHGRSAVVFDIIRKYLKYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYV N+TD+DDK+I RAN G L+ + EY D L+ P QP+ + ++
Sbjct: 61 DVTYVSNYTDIDDKMINRANKEGITVKQLAEKIIPEYQEDYGQLKIDKPDTQPKATQYIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
Q+ ++I ++I AY +E V++ VEK +YG+LSGQ + +AG R+ D +KR+P D
Sbjct: 121 QMIELIKKLIEKGYAYELEDGVYYEVEKFAHYGKLSGQNQDELKAGARIEKDDKKRHPHD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK AK EPSW SPWG GRPGWHIECSAMS L FDIHGGG+DLIFPHHE+EIA
Sbjct: 181 FVLWKKAKPDEPSWPSPWGEGRPGWHIECSAMSMDLLGETFDIHGGGMDLIFPHHEDEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA S V YW+HNG +T NNEKMSKSLGNFFT+++I +Y+P +R+ +I HYRS
Sbjct: 241 QSEAATGKSYVKYWLHNGFITINNEKMSKSLGNFFTLKEIFAKYNPNTVRYMIIGTHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S LD + +A+ ++D + L ++ +T++ +PA + + +F R
Sbjct: 301 PINFSHELLDQSENAL----SRIKDFLINLKNYK--NETSKSSPALKKTLENAIKDFEKR 354
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD +T+ L GA + +K +N + K L+ + KIE +K++ +L
Sbjct: 355 MDDDFDTAGGL-GALYNLIKEVNILM--------KNGDLAETDK-EKIETTLKKIDSVLC 404
Query: 437 LLP 439
+LP
Sbjct: 405 ILP 407
>gi|308273875|emb|CBX30475.1| Cysteinyl-tRNA synthetase [uncultured Desulfobacterium sp.]
Length = 478
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/441 (43%), Positives = 281/441 (63%), Gaps = 25/441 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L+IYN++ ++K F P+ GKV MYVCG T YD H+GHAR+ + FD++ +YL
Sbjct: 1 MSLRIYNTIERKKVPFEPVQPGKVSMYVCGPTVYDSCHIGHARSVIVFDVILKYLNATGL 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRNFTDVDDKII RA LG ++ RY +E+ DM L T +P+ ++H++
Sbjct: 61 EVTYVRNFTDVDDKIINRAVQLGIESHEVAERYIKEFYEDMDALNIKRATIEPKATEHID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I +I ++ + AY ++GD++++V+K +YG+LSG++LE+ AG RV +D RK NP D
Sbjct: 121 KIIALIEILLKKEIAYRIDGDIYYSVDKFKDYGKLSGRKLEDMEAGARVEIDERKNNPFD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+ K GEP W+SPWG GRPGWHIECSAMS+ YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKSQKPGEPYWESPWGRGRPGWHIECSAMSSAYLGETFDIHGGGKDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YW+HNG V N+EKMSKSLGNF I+ I + YHP ++R FL+S HYRS
Sbjct: 241 QSEGAFEKPFAKYWVHNGFVNINHEKMSKSLGNFLLIKDILKSYHPDSVRLFLLSNHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN---KLRDEF 373
P++++ ++ + A+ IY +Q E + A I +D IN ++F
Sbjct: 301 PIDFTDKAMEESEAALDKIYSAIQRVE----------EIADI--TGKDFINYPEGYWEKF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT+ + G D+++ IN +L + + ++I S I +++++
Sbjct: 349 CESMDDDFNTAKGI-GYLFDSVRHIN---RLLDENSNSDEIKTIINS---IYADIRKMGD 401
Query: 434 ILGLLPPGA---YSEVKTAFL 451
++G+L A +++ KT F+
Sbjct: 402 VIGILSEPAEIYFNKKKTKFI 422
>gi|312621501|ref|YP_004023114.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
2002]
gi|312201968|gb|ADQ45295.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
2002]
Length = 465
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/421 (45%), Positives = 260/421 (61%), Gaps = 17/421 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T KE F P+ GKV MYVCG T YD H+G+AR + FD L RY E+ EV
Sbjct: 1 MKLYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y++NFTDV+DK+I RAN G L+ R+ QEY D L T PR ++ +E +
Sbjct: 61 IYIQNFTDVEDKMINRANKEGVTVFELAERFIQEYYKDADRLNVKRATKNPRATEEIEDM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I +I+ AYVV+GDV+F K YG+LS + +E AG RV + +K +P DFA
Sbjct: 121 IALIQTLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEKKEDPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+W SPWG GRPGWHIECS M+ YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A+ +W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PL
Sbjct: 241 EASTGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA-EDCINKLRDEFHARM 377
N+S+ ++ A A+ IY ++ E + ++G T+ + + + + +L+ +F M
Sbjct: 301 NFSIDLIEQAESALKRIYTCYENLEYLI----KNGTTSNSSDSTLKAVLKELKAKFIDAM 356
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DDLNT+ TG + ++ IN+ N K + L + +KE+ ILG+
Sbjct: 357 EDDLNTAEA-TGYLFEMVREINTHSNTCSK-----------DVLILARDTLKELCSILGI 404
Query: 438 L 438
L
Sbjct: 405 L 405
>gi|238019166|ref|ZP_04599592.1| hypothetical protein VEIDISOL_01029 [Veillonella dispar ATCC 17748]
gi|237863865|gb|EEP65155.1| hypothetical protein VEIDISOL_01029 [Veillonella dispar ATCC 17748]
Length = 497
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/428 (45%), Positives = 275/428 (64%), Gaps = 23/428 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+MT+QKE+F P+ G+ MYVCGVT Y+ H+G+AR V++D++ RY++H+ +V
Sbjct: 19 ITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYKV 78
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G + +++NRY Y M L PRVS H+E I
Sbjct: 79 TYVQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDALGVQRADIYPRVSTHIEDI 138
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI+ +I AY ++GDV+++V+K +YG LSG+ L++ AG R+ VD RK+NP DFA
Sbjct: 139 IAMISTLIEKGYAYELDGDVYYSVDKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDFA 198
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIFPHHENEIAQS
Sbjct: 199 LWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQS 258
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C+ Q +V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRS
Sbjct: 259 EGCSG-QHPSVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRS 317
Query: 317 PLNYSVLQLDSASDAVFYIYQT------LQDCEVALSPFQEHGKTARINPAAEDCINKLR 370
PL++S +L+ A+ ++ + L+ CE +H + A E
Sbjct: 318 PLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGPCDEAQH----LLEKAKE-----YE 368
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKE 430
+EF A MSDD NT+ + F + +N+ + ++ + E++ +++ K
Sbjct: 369 EEFEAAMSDDFNTALATSSMFG-----LAKEINIYYQTVTGREGVVCQEAIAEVKRIFKF 423
Query: 431 VLRILGLL 438
+ ++G+L
Sbjct: 424 MTEVIGIL 431
>gi|325288490|ref|YP_004264671.1| cysteinyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
gi|324963891|gb|ADY54670.1| cysteinyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
Length = 476
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/391 (48%), Positives = 251/391 (64%), Gaps = 9/391 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+KIYN++ ++KE F P GKV MY CG T Y+ HLG+AR V FD++ RYL +
Sbjct: 1 MTVKIYNTIHKEKEEFIPREAGKVAMYACGPTTYNYFHLGNARMLVVFDMVRRYLAYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYV+NFTDVDDKII+RA++ PL+L+ RY +EY D L P T P+ +DH++
Sbjct: 61 EVTYVQNFTDVDDKIIKRASEENCEPLALAGRYIEEYYKDANALNIQPATVHPKATDHIK 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ ++I + AY VEGDV+FAVE P YGRLSG+ LE+ +AG RV +D +K NP D
Sbjct: 121 EMIEIIKGLEKKGLAYPVEGDVYFAVEHFPQYGRLSGRNLEDLQAGARVEIDDKKLNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP+W SPWG GRPGWHIECSAM+ YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKKAKPGEPAWPSPWGDGRPGWHIECSAMALKYLGPNFDIHGGGGDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
QS + YWMHN +T N EKMSKSLGNFF IR I +++ +R +L+ HYR
Sbjct: 241 QSEGYLDGEQFARYWMHNAFITVNQEKMSKSLGNFFMIRDILKKFPGEVVRFYLLGTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN---KLRDE 372
SPL++ +L+ A+ + + +++ ALS GK+ + +N K R
Sbjct: 301 SPLDFDDEKLEMAARGLDRLKTSVRLAGEALS----KGKSTDSAGTRGELLNASSKARAA 356
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLN 403
F M DD N++ F D K IN++LN
Sbjct: 357 FEEAMEDDFNSAQAYASLF-DLAKEINTALN 386
>gi|237745445|ref|ZP_04575925.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
gi|229376796|gb|EEO26887.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
Length = 462
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/403 (49%), Positives = 265/403 (65%), Gaps = 13/403 (3%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L+IYNS+T+ K++FTPI GKV MYVCG+T YD H+GHAR +SFD++YR+L+ L E
Sbjct: 3 SLQIYNSLTRSKQVFTPIEPGKVRMYVCGMTIYDYCHIGHARMMMSFDVVYRWLKALGYE 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKII RA + GE+ SL+ R+ Q D + L LPP ++PR ++++ +
Sbjct: 63 VTYVRNITDIDDKIINRAGENGESISSLTARFTQYMHEDTSALGILPPDHEPRATEYVPE 122
Query: 138 IKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ ++I ++ N AY E GDV ++V YG+LSG+ L++ RAGERV V++ KR+P D
Sbjct: 123 MLELIAKLEKNGLAYQSEDGDVNYSVRDFRGYGKLSGKSLDDLRAGERVDVNTGKRDPLD 182
Query: 197 FALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK+AK EP W S WG GRPGWHIECSAMS+ L FDIHGGG DL FPHHEN
Sbjct: 183 FVLWKSAKPSEPDEAKWSSRWGAGRPGWHIECSAMSSKLLGDHFDIHGGGADLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A V+YWMHNG V +NEKMSKSLGNFFTIR + + Y LR F+I +H
Sbjct: 243 EIAQSEGASGHPFVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVLKNYDAEVLRFFIIRSH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPF---QEHGKTARINPAAEDCINKLR 370
YRSPLNYS LD A A+ +Y L+D +V P +EH R + A D N
Sbjct: 303 YRSPLNYSDAHLDDARSALTRLYTALKDIDVQDKPVDWQEEH--AVRFSRAMNDDFNTPE 360
Query: 371 D-EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 412
+++++N +H + A Q LK + S L +L ++ P+Q
Sbjct: 361 AVAVLFELANEVNRTHSVEVASQ--LKALGSVLGLL-ERDPRQ 400
>gi|296449821|ref|ZP_06891588.1| cysteine--tRNA ligase [Clostridium difficile NAP08]
gi|296877885|ref|ZP_06901905.1| cysteine--tRNA ligase [Clostridium difficile NAP07]
gi|296261308|gb|EFH08136.1| cysteine--tRNA ligase [Clostridium difficile NAP08]
gi|296431082|gb|EFH16909.1| cysteine--tRNA ligase [Clostridium difficile NAP07]
Length = 467
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/422 (44%), Positives = 268/422 (63%), Gaps = 12/422 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+++K+YN++T+ KE F P+ GKV MYVCG T Y+ H+G+AR + FD L RYLE+
Sbjct: 1 MSVKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYV+NFTDVDDKII R+++ G +P ++ +Y +EY VD L T P+V+D+++
Sbjct: 61 DVTYVQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
QI + I ++ + AY V GDV+F K YG+LSGQ+ E+ AG R+ V+ +KR+P D
Sbjct: 121 QIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIA
Sbjct: 181 FVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ N+EKMSKS GNFFT+R I++ Y +R F++SAHYR+
Sbjct: 241 QSEARSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S L+ A + +Y T + E LS E T + ++ ++ R +F
Sbjct: 301 PVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE-LDGFRQKFIDA 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD+NT+ ++ F+ A K INS+++ + S +E +K +E E+ +L
Sbjct: 360 MDDDVNTADAVSVIFELA-KLINSNVD----------ENSSLEFAKKCLDEFNELTGVLN 408
Query: 437 LL 438
++
Sbjct: 409 IV 410
>gi|406897287|gb|EKD41287.1| hypothetical protein ACD_73C00777G0001 [uncultured bacterium]
Length = 482
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/426 (45%), Positives = 265/426 (62%), Gaps = 15/426 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN++T+QKE F P+ KVGMYVCGVT YD HLGHARA V+FD++YRYL
Sbjct: 1 MPLFVYNTLTRQKEEFKPLHAPKVGMYVCGVTVYDECHLGHARALVNFDVIYRYLSFRGF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+VRNFTDVDDKII +A G + S++ +Y + D+ L PPT +P+ ++H+E
Sbjct: 61 DVTFVRNFTDVDDKIINKAIKEGSDWKSVAEKYIATFHRDVTALGLKPPTIEPKATEHIE 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ +I + N AY GDVF+ V + +YG+LSG+++E +G R+ + K +P D
Sbjct: 121 EMLSLIGTLEKNGFAYPAGGDVFYKVRQKNDYGKLSGKKIEELESGARIEILEAKTDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK +K GEPSW S WG GRPGWHIECSAMS YL FDIHGGG DL FPHHENEIA
Sbjct: 181 FALWKGSKPGEPSWASHWGEGRPGWHIECSAMSMKYLGETFDIHGGGRDLSFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA YW+HNG V N EKMSKSLGNF TIR++ E+YHP LR F+++A YRS
Sbjct: 241 QSEAATGKLFAKYWLHNGFVNINAEKMSKSLGNFLTIREMLEKYHPEVLRLFILAAQYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK---LRDEF 373
PL+Y+ +++A ++ Y T + +E + + A+D K L +EF
Sbjct: 301 PLDYTEANINNARQSLIRWYTTTDRIQ------KECRHLEKTDDGAKDLEKKVLGLMNEF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT+ + TG D ++ N L+ K P+ ++ E+ K + EVL
Sbjct: 355 QEAMDDDFNTAKV-TGILFDLVREWNRVLDT-KLAVPQ----AVCEAFFKNVARISEVLG 408
Query: 434 ILGLLP 439
+ G P
Sbjct: 409 LFGAKP 414
>gi|423089340|ref|ZP_17077700.1| cysteine--tRNA ligase [Clostridium difficile 70-100-2010]
gi|357558276|gb|EHJ39775.1| cysteine--tRNA ligase [Clostridium difficile 70-100-2010]
Length = 467
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/422 (44%), Positives = 268/422 (63%), Gaps = 12/422 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+++K+YN++T+ KE F P+ GKV MYVCG T Y+ H+G+AR + FD L RYLE+
Sbjct: 1 MSVKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYV+NFTDVDDKII R+++ G +P ++ +Y +EY VD L T P+V+D+++
Sbjct: 61 DVTYVQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
QI + I ++ + AY V GDV+F K YG+LSGQ+ E+ AG R+ V+ +KR+P D
Sbjct: 121 QIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIA
Sbjct: 181 FVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ N+EKMSKS GNFFT+R I++ Y +R F++SAHYR+
Sbjct: 241 QSEARSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S L+ A + +Y T + E LS E T + ++ ++ R +F
Sbjct: 301 PVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE-LDDFRQKFIDA 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD+NT+ ++ F+ A K INS+++ + S +E +K +E E+ +L
Sbjct: 360 MDDDVNTADAVSVIFELA-KLINSNVD----------ENSSLEFAKKCLDEFNELTGVLN 408
Query: 437 LL 438
++
Sbjct: 409 IV 410
>gi|338533810|ref|YP_004667144.1| cysteinyl-tRNA synthetase [Myxococcus fulvus HW-1]
gi|337259906|gb|AEI66066.1| cysteinyl-tRNA synthetase [Myxococcus fulvus HW-1]
Length = 489
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/421 (45%), Positives = 258/421 (61%), Gaps = 11/421 (2%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
++++N+MT QKEL P + G+VG+YVCG T Y H+G+AR SFD++ RYL H +
Sbjct: 5 AIRLFNTMTMQKELLQPAIPGEVGVYVCGPTVYSYIHIGNARTFTSFDVVVRYLRHRGLK 64
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
V YVRNFTDVDDKII+ A + GE P++L+ RY + + D L L P + P+VSDH+ +
Sbjct: 65 VRYVRNFTDVDDKIIKAAAETGEAPVALAARYVEIFREDTRALHLLEPDFAPKVSDHLPE 124
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I +I ++++ AY +GDV+F+V +Y +LS + L++ GERV +KR P DF
Sbjct: 125 IIAIIQKLVDKGHAYASQGDVYFSVSSDADYAKLSRRNLDDLCVGERVQPGEQKREPLDF 184
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEP+WDSPWGPGRPGWHIECSAMSA YL FDIHGG +DLIFPHHENEIAQ
Sbjct: 185 ALWKAAKPGEPAWDSPWGPGRPGWHIECSAMSAKYLGETFDIHGGALDLIFPHHENEIAQ 244
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S +A S YWMH G + KMSKSLGN +R + P ALR F ++ HYR P
Sbjct: 245 SESANGVSFARYWMHCGFLDLEGAKMSKSLGNVVRLRDALTKVDPEALRFFFLATHYRHP 304
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L++S L A + Y Y+TL+ + +S GK P D + EF + M
Sbjct: 305 LSFSDKALADAETRMEYFYETLRKVDERIS-----GKDFGKGPLHGDP-RRFFTEFESAM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ L AL + +N L K P + + + +L+ + +V+ V +LGL
Sbjct: 359 DDDFNTAGGLG-----ALSGLFGMMNELTDKPPVKDKALVGRTLQALREDVRRVSGVLGL 413
Query: 438 L 438
Sbjct: 414 F 414
>gi|157145196|ref|YP_001452515.1| hypothetical protein CKO_00929 [Citrobacter koseri ATCC BAA-895]
gi|425075962|ref|ZP_18479065.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425086595|ref|ZP_18489688.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|444350682|ref|YP_007386826.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Enterobacter aerogenes
EA1509E]
gi|157082401|gb|ABV12079.1| hypothetical protein CKO_00929 [Citrobacter koseri ATCC BAA-895]
gi|204636645|gb|ACI01739.1| putative cysteinyl-tRNA synthetase class Ia [Escherichia coli]
gi|405593466|gb|EKB66907.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405603319|gb|EKB76440.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|443901512|emb|CCG29286.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Enterobacter aerogenes
EA1509E]
Length = 460
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/375 (49%), Positives = 239/375 (63%), Gaps = 17/375 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+ N++ QKEL P+ K+GMYVCGVT YDL HLGHAR V+FD++ RYL +V
Sbjct: 2 IKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA D GE+ SL+ R E +D A L LPP +PR ++H+ QI
Sbjct: 62 TFVRNITDIDDKIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTEHIPQI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++++ AY+ E GDV F+ + YG+LSGQ + RAG R+ V+ KR+P DF
Sbjct: 122 ISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEP W SPWG GRPGWHIECSAM+ HYL + FDIHGGG DLIFPHHENEIAQ
Sbjct: 182 VLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S +A V+YW+H G VT N EKMSKSL NFFT+R I R+ ++R FL+SAHYR P
Sbjct: 242 STSANDGPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDILNRFDAQSVRFFLLSAHYRKP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS + A ++ +Y Q + + S ++H + R F M
Sbjct: 302 LNYSEENIHLARASLTRLYTACQFADGSRS--EQH--------------DAWRARFCEAM 345
Query: 378 SDDLNTSHILTGAFQ 392
DD NT L F+
Sbjct: 346 DDDFNTPQALAILFE 360
>gi|416999202|ref|ZP_11939871.1| cysteine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
gi|333977355|gb|EGL78214.1| cysteine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
Length = 482
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/428 (45%), Positives = 275/428 (64%), Gaps = 23/428 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+MT+QKE+F P+ G+ MYVCGVT Y+ H+G+AR V++D++ RY++H+ +V
Sbjct: 4 ITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G + +++NRY Y M L PRVS H+E I
Sbjct: 64 TYVQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDALGVQRADIYPRVSTHIEDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI+ +I AY ++GDV+++V+K +YG LSG+ L++ AG R+ VD RK+NP DFA
Sbjct: 124 IAMISTLIEKGYAYELDGDVYYSVDKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C+ Q +V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRS
Sbjct: 244 EGCSG-QHPSVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQT------LQDCEVALSPFQEHGKTARINPAAEDCINKLR 370
PL++S +L+ A+ ++ + L+ CE +H + A E
Sbjct: 303 PLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGPCDEAQH----LLEKAKE-----YE 353
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKE 430
+EF A MSDD NT+ + F + +N+ + ++ + E++ +++ K
Sbjct: 354 EEFEAAMSDDFNTALATSSMFG-----LAKEINIYYQTVTGREGVVCQEAIAEVKRIFKF 408
Query: 431 VLRILGLL 438
+ ++G+L
Sbjct: 409 MTEVIGIL 416
>gi|229917379|ref|YP_002886025.1| cysteinyl-tRNA synthetase [Exiguobacterium sp. AT1b]
gi|259511833|sp|C4KZR7.1|SYC_EXISA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229468808|gb|ACQ70580.1| cysteinyl-tRNA synthetase [Exiguobacterium sp. AT1b]
Length = 465
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/376 (49%), Positives = 241/376 (64%), Gaps = 9/376 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YNS+T +KE F PIV GKV MYVCG T Y+ H+G+AR A++FD + RYL + EV
Sbjct: 2 IQLYNSLTNKKEPFVPIVPGKVSMYVCGPTVYNYIHVGNARPAIAFDTVRRYLTYRGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKIIR AN+LGE+ +L+NRY + YL D L P PRV+D ME+I
Sbjct: 62 KYVLNFTDVDDKIIRTANELGEDTETLTNRYIEAYLADTGALNVQPADVHPRVTDTMEEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I Q+ AY EGDV+F +K YG+LS Q +E+ RAG RV V +K +P DF
Sbjct: 122 IEFIRQLETEGFAYESEGDVYFRTKKFETYGKLSQQSIEDLRAGSRVDVGEKKEDPLDFV 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK EPSWDSPWG GRPGWHIECSAM+ +L + DIH GG DL FPHHENEIAQS
Sbjct: 182 LWKAAKPDEPSWDSPWGKGRPGWHIECSAMAKKHLGTTIDIHAGGHDLKFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A +YW+HNG + NEKMSKSLGNF + + + P+ LR F++S HYR P+
Sbjct: 242 EACNHAKFANYWLHNGFINIENEKMSKSLGNFLLVHEALKEVDPMVLRFFMLSVHYRHPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHA 375
NYS ++ A++ I + Q+ E LS TA + A+E KL + F
Sbjct: 302 NYSRELIEQAANGWSRIKEAYQNIEYRLSV------TAGLGEASESMERKLESIKASFIE 355
Query: 376 RMSDDLNTSHILTGAF 391
M DD+NT++ +T F
Sbjct: 356 SMDDDINTANAVTVLF 371
>gi|86147083|ref|ZP_01065400.1| cysteinyl-tRNA synthetase [Vibrio sp. MED222]
gi|85835148|gb|EAQ53289.1| cysteinyl-tRNA synthetase [Vibrio sp. MED222]
Length = 461
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/421 (46%), Positives = 262/421 (62%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 NFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV GDV F V+K YG+LS Q LE +AG RV +DS KR+P DF
Sbjct: 122 IELVEKLIQRGFAYVASNGDVMFEVKKFDEYGKLSKQDLEQLQAGARVDIDSAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ +V +P E+ + + F M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDVTAAP-----------AGGEEYVTR----FSTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F+ A +N +K + IE + ++E+ I+G+
Sbjct: 347 NDDFNTPEAYSVLFEMA-----REINRIKTES--------IEKASALGALMRELADIIGI 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|386826602|ref|ZP_10113709.1| cysteinyl-tRNA synthetase [Beggiatoa alba B18LD]
gi|386427486|gb|EIJ41314.1| cysteinyl-tRNA synthetase [Beggiatoa alba B18LD]
Length = 464
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/412 (46%), Positives = 257/412 (62%), Gaps = 25/412 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T+ K F PI KV MYVCG+T YD H+GHAR V FD++ R+L +V
Sbjct: 2 LTIYNTLTKDKAPFKPIEANKVRMYVCGMTVYDYCHVGHARVMVVFDMVARWLRASGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY+RN TD+DDKII RAN+ GE+ SL+ R+ Q D L L P +PR + +++ I
Sbjct: 62 TYIRNITDIDDKIINRANENGEDIYSLTERFIQAMYEDADALGVLRPDQEPRATQYIDHI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+IT+++ AY GDV++AV K YG+LSG+R+E+ RAGERV ++ K++P DF
Sbjct: 122 IDLITRLMKRGYAYTANNGDVYYAVGKFAEYGKLSGKRIEDLRAGERVDIEEAKQDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EPSW SPWG GRPGWHIECSAMS H L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPNEPSWASPWGNGRPGWHIECSAMSTHCLGNHFDIHGGGMDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMHNG V N EKMSKSLGNFFT+R + +++ +R+F++++HYRSP
Sbjct: 242 SEGATGEQFVNVWMHNGFVRVNEEKMSKSLGNFFTLRDVLQKFPAEVIRYFILNSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY QLD+A A+ +Y L+ E +P ++ ++ F M
Sbjct: 302 LNYGDQQLDAAQQALTRLYTALRGLEDTGAPLDKN--------------SEFYQRFATAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ-----QQLSLIESLRKI 424
+DD NT+ + F ++ +N L+ Q QQL L+ + I
Sbjct: 348 NDDFNTAEAIAVLFD-----LSREVNRLRVDNSSQAVAVAQQLKLLGGILGI 394
>gi|352684343|ref|YP_004896328.1| cysteinyl-tRNA synthetase [Acidaminococcus intestini RyC-MR95]
gi|350278998|gb|AEQ22188.1| cysteinyl-tRNA synthetase [Acidaminococcus intestini RyC-MR95]
Length = 474
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/434 (46%), Positives = 266/434 (61%), Gaps = 21/434 (4%)
Query: 25 MTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNF 84
MT++KE F P+ GKVG+YVCGVT Y+ H+G+AR V +D+++R+LEH +VT+V+NF
Sbjct: 1 MTRKKEEFVPLHPGKVGIYVCGVTPYNHPHIGNARPFVVWDVIHRFLEHEGYDVTHVQNF 60
Query: 85 TDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQ 144
TDVDDKIIR AN G ++NRY + Y M L PRVSDH+ I + Q
Sbjct: 61 TDVDDKIIREANKEGVTWDVIANRYIKAYFEVMDKLHVRRAHVYPRVSDHIPDIIHTVQQ 120
Query: 145 IINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAK 204
+I++ YVV+GDV++ VEK +YG LSG+ L++ AG RV VD RK NP DFALWK+AK
Sbjct: 121 LIDHGYGYVVDGDVYYRVEKFEHYGELSGRTLDDMMAGARVDVDERKENPMDFALWKSAK 180
Query: 205 AGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS-CAACQ 263
GEPSWDSPWG GRPGWHIECS MS YL S FD HGGG DLIFPHHENEIAQS A C
Sbjct: 181 PGEPSWDSPWGKGRPGWHIECSTMSTKYLGSSFDFHGGGSDLIFPHHENEIAQSEGATCC 240
Query: 264 DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVL 323
V YW+HNG +T N EKMSKSLGNFFT+ I + Y P LR+F++ HYRSPL++S
Sbjct: 241 HPFVRYWVHNGFITINEEKMSKSLGNFFTVLDILKEYEPEVLRYFILQTHYRSPLDFSDA 300
Query: 324 QLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP-----AAEDCINKLRDEFHARMS 378
+L AS ++L+ A E + P A + ++ + F M
Sbjct: 301 RLKEAS-------RSLERLRTAAQNLTELKGVISVGPDEDSLALREKVSGFVESFLEAMR 353
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NTS ++ F + +N+L + Q + + ++ KE+ I+G+L
Sbjct: 354 DDFNTSLAISYLFA-----LGKEINILHQSVMTGGQKPDGKLVDMMDKAWKEMTSIIGIL 408
Query: 439 P--PGAYSE-VKTA 449
PGA +E VK A
Sbjct: 409 EEDPGAKTEAVKDA 422
>gi|347540729|ref|YP_004848154.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
gi|345643907|dbj|BAK77740.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
Length = 457
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/355 (51%), Positives = 240/355 (67%), Gaps = 5/355 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T+QKE+F PI GK MYVCG+T YD HLGHAR V FD++ R+L ++
Sbjct: 2 LNLYNTLTRQKEVFKPITPGKASMYVCGMTVYDYCHLGHARMVVVFDMVARWLRATGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + GE +L+ R+ D L + P ++PR ++H+ +
Sbjct: 62 TYVRNITDIDDKIIKRAAENGEPIQALTARFIDAMNEDFDALGVIHPDFEPRATEHVPGM 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I +I N AY GDV++AV + P YG+LSG+ LE+ RAGERV VD KR+P DF
Sbjct: 122 IALIETLIANGRAYPAPNGDVYYAVREFPGYGKLSGKSLEDLRAGERVEVDVNKRDPFDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEPSW SPWG GRPGWHIECS MS H+L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPSWPSPWGEGRPGWHIECSVMSEHHLGEHFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YW+HNG + +NEKMSKSLGNFFTIR++ E+Y +R F++ AHYRSP
Sbjct: 242 SEGAHNHDFVNYWLHNGFIRVDNEKMSKSLGNFFTIREVLEKYDAEVVRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC---EVALSPFQEHGKTARINPAAEDCINKL 369
LNYS + LD A ++ +Y L++ ++A+ ++E+ R A +D N +
Sbjct: 302 LNYSDVHLDDAKQSLTRLYTALKNVTATDIAID-WEENDYARRFRQAMDDDFNTV 355
>gi|224825711|ref|ZP_03698815.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
gi|224601935|gb|EEG08114.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
Length = 457
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/355 (51%), Positives = 240/355 (67%), Gaps = 5/355 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T+QKE+F PI GK MYVCG+T YD HLGHAR V FD++ R+L ++
Sbjct: 2 LNLYNTLTRQKEVFKPITPGKASMYVCGMTVYDYCHLGHARMVVVFDMVARWLRATGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + GE +L+ R+ D L + P ++PR ++H+ +
Sbjct: 62 TYVRNITDIDDKIIKRAAENGEPIQALTARFIDAMNEDFDALGVIHPDFEPRATEHVPGM 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I +I N AY GDV++AV + P YG+LSG+ LE+ RAGERV VD KR+P DF
Sbjct: 122 IALIETLIANGRAYPAPNGDVYYAVREFPGYGKLSGKSLEDLRAGERVEVDVNKRDPFDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEPSW SPWG GRPGWHIECS MS H+L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPSWPSPWGEGRPGWHIECSVMSEHHLGEHFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YW+HNG + +NEKMSKSLGNFFTIR++ E+Y +R F++ AHYRSP
Sbjct: 242 SEGAHNHDFVNYWLHNGFIRVDNEKMSKSLGNFFTIREVLEKYDAEVVRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC---EVALSPFQEHGKTARINPAAEDCINKL 369
LNYS + LD A ++ +Y L++ ++A+ ++E+ R A +D N +
Sbjct: 302 LNYSDVHLDDAKQSLTRLYTALKNVTATDIAID-WEENDYARRFRQAMDDDFNTV 355
>gi|302341971|ref|YP_003806500.1| cysteinyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
gi|301638584|gb|ADK83906.1| cysteinyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
Length = 483
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/378 (50%), Positives = 242/378 (64%), Gaps = 9/378 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN+ +++KE F P+ G V +YVCGVT YD H+GHAR V+FD + R+
Sbjct: 1 MPLVVYNTQSRRKEEFIPLEPGVVRVYVCGVTVYDDPHIGHARCYVAFDAMVRHFLAKGW 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V YVRNFTD+DDKIIRRA + G L+++Y + + DMA L LPP+++PR ++H+
Sbjct: 61 RVNYVRNFTDIDDKIIRRAAESGLGWRELADKYIESFRQDMAALDVLPPSHEPRATEHIA 120
Query: 137 QIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
++ I ++ AY +EG DV FAVE YG+LS + LE+ +AG RV VD RK+NP
Sbjct: 121 EMIATIQTLMAKGHAYQIEGGDVLFAVESFDGYGKLSRRNLEDMQAGARVEVDPRKKNPM 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWKA+K GEPSWDSP GPGRPGWHIEC+AMS YL FDIHGGG DL+FPHHENEI
Sbjct: 181 DFVLWKASKPGEPSWDSPLGPGRPGWHIECTAMSGKYLGQTFDIHGGGEDLVFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQ A YW+HNG V N+EKMSKSLGNFFTI+ I + P ALR FL+S HYR
Sbjct: 241 AQGEACTGHPLAHYWLHNGFVRVNHEKMSKSLGNFFTIKDILKITRPEALRLFLLSKHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCE--VALSPFQEHGKTARINPAAEDCINKLRDEF 373
SPL++S + A + +Y LQ + A P G+ AAE I L DEF
Sbjct: 301 SPLDFSDAAIKEAGAGLERLYTALQAAQERAAAGPLDAAGQAL----AAE--IQALADEF 354
Query: 374 HARMSDDLNTSHILTGAF 391
A M DD NT+ + F
Sbjct: 355 EAGMDDDFNTARAIGALF 372
>gi|255099211|ref|ZP_05328188.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-63q42]
gi|255304994|ref|ZP_05349166.1| cysteinyl-tRNA synthetase [Clostridium difficile ATCC 43255]
gi|400927240|ref|YP_001086515.2| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Clostridium difficile 630]
gi|347595718|sp|Q18CD5.2|SYC_CLOD6 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|328887507|emb|CAJ66866.2| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Clostridium difficile 630]
Length = 465
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/420 (45%), Positives = 266/420 (63%), Gaps = 12/420 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T+ KE F P+ GKV MYVCG T Y+ H+G+AR + FD L RYLE+ +V
Sbjct: 1 MKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII R+++ G +P ++ +Y +EY VD L T P+V+D+++QI
Sbjct: 61 TYVQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQQI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I ++ + AY V GDV+F K YG+LSGQ+ E+ AG R+ V+ +KR+P DF
Sbjct: 121 IEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIAQS
Sbjct: 181 LWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YWMHNG++ N+EKMSKS GNFFT+R I++ Y +R F++SAHYR+P+
Sbjct: 241 EARSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRNPV 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+ A + +Y T + E LS E T + ++ ++ R +F M
Sbjct: 301 NFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE-LDDFRQKFIDAMD 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD+NT+ ++ F+ A K INS+++ + S +E +K +E E+ +L ++
Sbjct: 360 DDVNTADAVSVIFELA-KLINSNVD----------ENSSLEFAKKCLDEFNELTGVLNIV 408
>gi|452852528|ref|YP_007494212.1| Cysteinyl-tRNA synthetase [Desulfovibrio piezophilus]
gi|451896182|emb|CCH49061.1| Cysteinyl-tRNA synthetase [Desulfovibrio piezophilus]
Length = 485
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/412 (45%), Positives = 263/412 (63%), Gaps = 15/412 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++ +QK+ FTPI KV MYVCG+TAYDL H+GHAR++V FD+LYRYL H +V
Sbjct: 1 MRLYNTLARQKQEFTPIHENKVNMYVCGITAYDLCHIGHARSSVVFDVLYRYLRHKGFDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T++RNFTD+DDKII+RAN++G+ ++ ++ E+ VDM L +P+ ++H+ ++
Sbjct: 61 TFIRNFTDIDDKIIKRANEVGKEAGEIAEKFIGEFYVDMDRLSVNRADIEPKCTEHIPEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ +I D AY GDV+F V +YG+LSG+ ++ +G R+A K++P DF
Sbjct: 121 IALTQHLIETDHAYATPSGDVYFRVRSFEDYGKLSGRNVDELESGARIAPGEEKQDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK AK GEPSW+SPWG GRPGWH+ECSAMS Y DIHGGG DL FPHHENEIAQ
Sbjct: 181 ALWKGAKPGEPSWESPWGQGRPGWHLECSAMSEKYAPLPLDIHGGGQDLSFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA YW+HNG V N+EKMSKSLGNFFTIR I +++ P LR+FL++ HYRSP
Sbjct: 241 SEAATGKPFAKYWVHNGFVQINSEKMSKSLGNFFTIRDILDKFLPETLRYFLLTMHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR- 376
L++S L+ A + IY L +V L+ Q + +P E+ + +L DE
Sbjct: 301 LDFSFEALEEAEKGIKRIYSALAQADVELAKTQ-----WKKSPFPEELVTEL-DEIEKHW 354
Query: 377 ---MSDDLNTSHILTGAFQDALKF---INSSLNMLKKKQPKQQQLSLIESLR 422
M DD+NT+ L F A++ I N+ K + + L +++ ++
Sbjct: 355 VEAMEDDMNTAGALGHVFS-AIRLTGRIVEDKNLRKSEGGRDMLLRIMDDMK 405
>gi|407692004|ref|YP_006816793.1| cysteinyl-tRNA ligase [Actinobacillus suis H91-0380]
gi|407388061|gb|AFU18554.1| cysteinyl-tRNA ligase [Actinobacillus suis H91-0380]
Length = 459
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/421 (47%), Positives = 255/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINSNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D DL L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ LD A A+ +Y +L+ C++++ E + + F A M
Sbjct: 302 LNYSLDNLDLARSALERLYTSLRGCDLSVEAV-----------GGEQYV----EAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ I +N LK + + + +KE+ +LGL
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTED--------VAKANGLAVRLKELAGVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|313893308|ref|ZP_07826883.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
gi|313442204|gb|EFR60621.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
Length = 482
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/428 (45%), Positives = 276/428 (64%), Gaps = 23/428 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+MT+QKE+F P+ G+ MYVCGVT Y+ H+G+AR V++D++ RY++H+ +V
Sbjct: 4 ITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G + +++NRY Y M L PRVS H+E I
Sbjct: 64 TYVQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDALGVQRADIYPRVSTHIEDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI+ +I AY ++GDV+++V+K +YG LSG+ L++ AG R+ VD RK+NP DFA
Sbjct: 124 IAMISTLIEKGYAYELDGDVYYSVDKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C+ Q V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRS
Sbjct: 244 EGCSG-QHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQT------LQDCEVALSPFQEHGKTARINPAAEDCINKLR 370
PL++S +L+ A+ ++ + L+ CE P E R+ A++
Sbjct: 303 PLDFSDERLEEANKSLERLSTAIENLLYLEKCEPG--PCDE---AQRLLEKAKE----YE 353
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKE 430
+EF A MSDD NT+ + F + +N+ + ++ + E++ +++ K
Sbjct: 354 EEFEAAMSDDFNTALATSSMFG-----LAKEINIYYQAVTGREGVVCQEAIAEVKRIFKF 408
Query: 431 VLRILGLL 438
+ ++G+L
Sbjct: 409 MTEVIGIL 416
>gi|255654140|ref|ZP_05399549.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-23m63]
Length = 465
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/420 (45%), Positives = 266/420 (63%), Gaps = 12/420 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T+ KE F P+ GKV MYVCG T Y+ H+G+AR + FD L RYLE+ +V
Sbjct: 1 MKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII R+++ G +P ++ +Y +EY VD L T P+V+D+++QI
Sbjct: 61 TYVQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQQI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I ++ + AY V GDV+F K YG+LSGQ+ E+ AG R+ V+ +KR+P DF
Sbjct: 121 IEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIAQS
Sbjct: 181 LWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YWMHNG++ N+EKMSKS GNFFT+R I++ Y +R F++SAHYR+P+
Sbjct: 241 EARSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRNPV 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+ A + +Y T + E LS E T + ++ ++ R +F M
Sbjct: 301 NFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE-LDGFRQKFIDAMD 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD+NT+ ++ F+ A K INS+++ + S +E +K +E E+ +L ++
Sbjct: 360 DDVNTADAVSVIFELA-KLINSNVD----------ENSSLEFAKKCLDEFNELTGVLNIV 408
>gi|392546145|ref|ZP_10293282.1| cysteinyl-tRNA ligase [Pseudoalteromonas rubra ATCC 29570]
Length = 459
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/394 (49%), Positives = 244/394 (61%), Gaps = 21/394 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IY+++T+QK F PIV GKVGMYVCG+T YD H+GHAR VSFD++ RYL HL EV
Sbjct: 2 LQIYDTLTRQKTEFKPIVEGKVGMYVCGITIYDFCHVGHARTYVSFDVMNRYLRHLGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E +L+ R + D L LP +P V+ HM++I
Sbjct: 62 TYVRNITDVDDKIIKRAAENNEEINALTVRMTKAMHEDFEALNILPADIEPTVTGHMDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+MI ++I AYV GDV F V +YG+LS Q L+ +AG RV V K +P DF
Sbjct: 122 IEMIERLIEKGHAYVASNGDVLFDVSTFEDYGKLSQQDLDMLQAGARVEVAEGKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWTSPWGEGRPGWHIECSAMSSKHLGELFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSLGNFFT+R++ + Y +R+FLI+ HYRS
Sbjct: 242 SCCANNGCYVNTWIHTGMVQVNKEKMSKSLGNFFTVREVLKAYDRETVRYFLINGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ IY L+ E+ + + AR F A M
Sbjct: 302 LNYSQENLEQARSSLERIYTALRGVELVETELAGNPFVAR---------------FEAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 411
+DD NT L F+ + +N+LK K
Sbjct: 347 NDDFNTPEALPVIFE-----LAKEVNLLKDSDAK 375
>gi|406879047|gb|EKD27781.1| hypothetical protein ACD_79C00582G0003 [uncultured bacterium]
Length = 492
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/431 (45%), Positives = 269/431 (62%), Gaps = 29/431 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LK+YN+MT+ KE F P+ G+V MYVCG+T YD +HLGHARA SFD+L+R+L++L
Sbjct: 1 MELKLYNTMTKTKEKFEPLKSGEVKMYVCGMTVYDNAHLGHARAYTSFDVLFRFLQYLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRA----NDLGENPLS----LSNRYCQEYLVDMADLQCLPPTYQ 128
VTYVRN TD+DDKII RA D NP LS R+ +E+L DM L LP + +
Sbjct: 61 RVTYVRNVTDIDDKIINRAREQIQDFSTNPNKSCEILSTRFYKEFLDDMKALNLLPASIE 120
Query: 129 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 188
P+ + H+++I DMI +IN AY V+G+V+F + K NYG+LSG+ +E+ R+ D
Sbjct: 121 PKATMHIKEIIDMIEGLINKGYAYNVDGNVYFNITKFLNYGKLSGRNIEDTELHSRIDQD 180
Query: 189 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 248
+ K+NP DFALWK +P W+SP+G GRPGWHIECSAMS YL +FDIHGGG DLIF
Sbjct: 181 ANKKNPLDFALWKKHVNDDPYWESPFGKGRPGWHIECSAMSMKYLGEEFDIHGGGQDLIF 240
Query: 249 PHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHF 308
PHHENEIAQS A YW+HNG +T N+EKMSKSL NF TIR++T Y+PL ++ +
Sbjct: 241 PHHENEIAQSAAYSGKGFARYWIHNGFITVNHEKMSKSLKNFKTIRELTAVYNPLNIKFY 300
Query: 309 LISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK 368
L+S HYRSPL+++ + + ++ +F I TL ++ L ++ D K
Sbjct: 301 LLSTHYRSPLDFNDNLIKNCAEGLFKIENTLSRAKLVLE-----------ESSSIDNTKK 349
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
L +F M DD+NT L+ F + L +K+ +++ SLI ++
Sbjct: 350 LPADFIDAMCDDINTPKALSVIFNECTGLNKILEGNLPEKEAIKEKYSLIINM------- 402
Query: 429 KEVLRILGLLP 439
L+ILGL P
Sbjct: 403 ---LQILGLEP 410
>gi|365835886|ref|ZP_09377294.1| cysteine--tRNA ligase [Hafnia alvei ATCC 51873]
gi|364565006|gb|EHM42743.1| cysteine--tRNA ligase [Hafnia alvei ATCC 51873]
Length = 469
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/421 (47%), Positives = 253/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCGVT YDL H+GH R VSFD++ RYL +L +
Sbjct: 10 LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYNL 69
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + GE L+ R E D L P +PR + H+ +I
Sbjct: 70 KYVRNVTDVDDKIIKRALENGETCDQLTERMLAEMHKDFDSLNIARPDLEPRATHHIPEI 129
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q+I AYV GDV FAV+ P+YG LS Q LE +AG RV + KRNP DF
Sbjct: 130 IEIVEQLITRGHAYVASNGDVMFAVDTDPDYGLLSRQDLEQLQAGARVEIADVKRNPMDF 189
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 190 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIAQ 249
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRS
Sbjct: 250 SSCAHDGPYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLQHYDAETVRYFLMSGHYRSQ 309
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ G ++ PA D + F M
Sbjct: 310 LNYSEENLKQARSALERLYTALR------------GTDSKAEPAGGD---EFESRFREAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + Q +L LRK+ +ILGL
Sbjct: 355 DDDFNTPEAYSALFD-----LAREVNRLKSEDMAQAN-ALAAELRKL-------AKILGL 401
Query: 438 L 438
L
Sbjct: 402 L 402
>gi|317491067|ref|ZP_07949503.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920614|gb|EFV41937.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 461
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/421 (48%), Positives = 251/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCGVT YDL H+GH R VSFD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + GE L+ R E D L P +PR + H+ +I
Sbjct: 62 KYVRNVTDVDDKIIKRALENGETCDQLTERMLAEMHKDFDSLNIARPDLEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q+I AYV GDV FAV+ P+YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEIVEQLITRGHAYVASNGDVMFAVDTDPDYGLLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFTIR + E Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLEHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ G + PA D F M
Sbjct: 302 LNYSEENLKQARSALERLYTALR------------GTEPQAEPAGGDVFEA---RFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + Q +L LRK+ +ILGL
Sbjct: 347 DDDFNTPEAYSALFD-----LAREVNRLKSEDMAQAN-ALAAELRKL-------AKILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|419765672|ref|ZP_14291901.1| hypothetical protein UUU_25010 [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397741410|gb|EJK88639.1| hypothetical protein UUU_25010 [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 471
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/380 (48%), Positives = 242/380 (63%), Gaps = 17/380 (4%)
Query: 14 KMDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEH 73
++++ +K+ N++ QKEL P+ K+GMYVCGVT YDL HLGHAR V+FD++ RYL
Sbjct: 8 EVNVMIKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRF 67
Query: 74 LKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSD 133
+VT+VRN TD+DDKII+RA D GE+ SL+ R E +D A L LPP +PR ++
Sbjct: 68 RGYDVTFVRNITDIDDKIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTE 127
Query: 134 HMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKR 192
H+ QI MI ++++ AY+ E GDV F+ + YG+LSGQ + RAG R+ V+ KR
Sbjct: 128 HIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKR 187
Query: 193 NPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHE 252
+P DF LWK AK GEP W SPWG GRPGWHIECSAM+ YL + FDIHGGG DLIFPHHE
Sbjct: 188 DPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCRYLGTHFDIHGGGSDLIFPHHE 247
Query: 253 NEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 312
NEIAQS +A V+YW+H G VT N EKMSKSL NFFT+R I R+ ++R FL+SA
Sbjct: 248 NEIAQSTSANVGPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDILNRFDAQSVRFFLLSA 307
Query: 313 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 372
HYR PLNYS + A ++ +Y Q + + S ++H + R
Sbjct: 308 HYRKPLNYSEENIHLARASLTRLYTACQFADGSRS--EQH--------------DAWRAR 351
Query: 373 FHARMSDDLNTSHILTGAFQ 392
F M DD NT L F+
Sbjct: 352 FCEAMDDDFNTPQALAILFE 371
>gi|419136924|ref|ZP_13681722.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5E]
gi|377984810|gb|EHV48038.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5E]
Length = 460
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/375 (49%), Positives = 239/375 (63%), Gaps = 17/375 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+ N++ QKEL P+ K+GMYVCGVT YDL HLGHAR V+FD++ RYL +V
Sbjct: 2 IKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA D GE+ SL+ R E +D A L LPP +PR ++H+ QI
Sbjct: 62 TFVRNITDIDDKIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTEHIPQI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++++ AY+ E GDV F+ + YG+LSGQ + RAG R+ V+ KR+P DF
Sbjct: 122 ISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEP W SPWG GRPGWHIECSAM+ HYL + FDIHGGG DLIFPHHENEIAQ
Sbjct: 182 VLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S +A V+YW+H G VT N EKMSKSL +FFT+R I R+ ++R FL+SAHYR P
Sbjct: 242 STSANDGPYVNYWLHTGMVTVNKEKMSKSLNSFFTLRDILNRFDAQSVRFFLLSAHYRKP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS + A ++ +Y Q + + S ++H + R F M
Sbjct: 302 LNYSEENIHLARASLTRLYTACQFADGSRS--EQH--------------DAWRARFCGAM 345
Query: 378 SDDLNTSHILTGAFQ 392
DD NT L F+
Sbjct: 346 DDDFNTPQALAILFE 360
>gi|375083186|ref|ZP_09730216.1| cysteinyl-tRNA synthetase [Thermococcus litoralis DSM 5473]
gi|374742140|gb|EHR78548.1| cysteinyl-tRNA synthetase [Thermococcus litoralis DSM 5473]
Length = 474
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/410 (45%), Positives = 251/410 (61%), Gaps = 3/410 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN+M++QKE F P+ G+V MYVCG T YD +HLGHAR ++FD++ RYLEH V
Sbjct: 1 MKVYNTMSKQKEEFKPLRDGEVRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHKGYTV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
V NFTD+DDKIIRRAN+ GE+P L+ ++ + +L DM L+ P PRV++H++ I
Sbjct: 61 LMVMNFTDIDDKIIRRANETGEDPKELAEKFLKYFLEDMKALKVKPADIYPRVTEHIQDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D + ++ AY V+F V K YG+LS E+ R G RV K+NP DFA
Sbjct: 121 IDFVKKLEEKGYAYEGSDGVYFEVRKYQEYGKLSKINPEDLRKGVRVEPGEGKKNPEDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP W+SPWG GRPGWHIECS MS YL FDIHGGG DLIFPHHENEIAQ+
Sbjct: 181 LWKKAKPGEPKWESPWGKGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIAQT 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V YW+H G V EKMSKSLGNF TIR++ +RY +R F++ HYRSPL
Sbjct: 241 EACTGKEWVRYWLHTGFVMVKGEKMSKSLGNFVTIRELLQRYSAEVIRFFVLQKHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
+Y+ + A + + +Y TL++ +AL + K + + + R +F+ M
Sbjct: 301 DYTEEGIQHAKNNLERLYNTLENIRIALEKAETPFKWDKEEFELYEVVRDARKKFYEAMD 360
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
DD NT+ + F+ A +N L ++K PK+ L K+ +EV
Sbjct: 361 DDFNTAEAMKPIFEVA-NAVNRYLEKVEK--PKESVLRKALEFFKMVSEV 407
>gi|84391753|ref|ZP_00991655.1| cysteinyl-tRNA synthetase [Vibrio splendidus 12B01]
gi|84376466|gb|EAP93345.1| cysteinyl-tRNA synthetase [Vibrio splendidus 12B01]
Length = 461
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/421 (46%), Positives = 262/421 (62%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 NFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV GDV F V+K YG+LS Q L+ +AG RV VDS KR+P DF
Sbjct: 122 VELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDSAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ +V +P E+ + + F M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDVTAAP-----------AGGEEYVTR----FSTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F+ A +N +K + +E + ++E+ I+G+
Sbjct: 347 NDDFNTPEAYSVLFEMA-----REINRIKTES--------VEKASALGALMRELADIIGI 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|363891501|ref|ZP_09318680.1| cysteine-tRNA ligase [Eubacteriaceae bacterium CM2]
gi|361965558|gb|EHL18540.1| cysteine-tRNA ligase [Eubacteriaceae bacterium CM2]
Length = 466
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/411 (44%), Positives = 265/411 (64%), Gaps = 8/411 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN+M+ QKE F + +GKV MY CG T Y+ H+G+AR + FD L YLE++ EV
Sbjct: 1 MKIYNTMSSQKEEFKELEKGKVKMYSCGPTVYNYFHIGNARPFIVFDTLRNYLEYIGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTDVDDKII +AN+ G P+ L+++Y +EY D + T PRV++++++I
Sbjct: 61 TFVQNFTDVDDKIIIKANEEGITPIQLADKYIEEYFKDAKAIGIRKATVHPRVTENIKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D I +I+ AYV+ DV+F V+K YG+LS + +++ +G R+ ++ KR P DFA
Sbjct: 121 IDFIQDLIDKGFAYVLGNDVYFEVKKFKEYGKLSHKNIDDLLSGARIEINDEKRAPIDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GE WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKGKKEGEIGWDSPWGQGRPGWHIECSVMSNKYLGESIDIHSGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + +YWMHNG++ +NEKMSKSLGNFFT+R + + + LR F++SAHYRSP+
Sbjct: 241 EARSSHTFANYWMHNGYINVDNEKMSKSLGNFFTVRDVLKEFDGDTLRFFMLSAHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAEDCI--NKLRDEFHA 375
NYS L+ A +++ + +++C+ L+ + KT E+ + + + F
Sbjct: 301 NYSKDMLNQAKNSL----ERIKNCKNNLNFILTKIDKTDMSEQEKENVVYLQECKTNFID 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 426
+M+DDLNT+ +T F D +KF N+++++ K QQ L ++ L + N
Sbjct: 357 KMNDDLNTADAITAIF-DLVKFANTNVSIDSSKVFVQQTLDMLNELTGVLN 406
>gi|260681821|ref|YP_003213106.1| cysteinyl-tRNA synthetase [Clostridium difficile CD196]
gi|260685418|ref|YP_003216551.1| cysteinyl-tRNA synthetase [Clostridium difficile R20291]
gi|260207984|emb|CBA60138.1| cysteinyl-tRNA synthetase [Clostridium difficile CD196]
gi|260211434|emb|CBE01534.1| cysteinyl-tRNA synthetase [Clostridium difficile R20291]
Length = 467
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/387 (47%), Positives = 253/387 (65%), Gaps = 2/387 (0%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+++K+YN++T+ KE F P+ GKV MYVCG T Y+ H+G+AR + FD L RYLE+
Sbjct: 1 MSVKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYV+NFTDVDDKII R+++ G +P ++ +Y +EY VD L T P+V+D+++
Sbjct: 61 DVTYVQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
QI + I ++ + AY V GDV+F K YG+LSGQ+ E+ AG R+ V+ +KR+P D
Sbjct: 121 QIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIA
Sbjct: 181 FVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A YWMHNG++ N+EKMSKS GNFFT+R I++ Y +R F++SAHYR+
Sbjct: 241 QSEARSGKIFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S L+ A + +Y T + E LS E T + ++ ++ R +F
Sbjct: 301 PVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE-LDDFRQKFIDA 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLN 403
M DD+NT+ ++ F+ A K INS+++
Sbjct: 360 MDDDVNTADAVSVIFELA-KLINSNVD 385
>gi|218709995|ref|YP_002417616.1| cysteinyl-tRNA synthetase [Vibrio splendidus LGP32]
gi|254781698|sp|B7VGZ1.1|SYC_VIBSL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|218323014|emb|CAV19191.1| Cysteinyl-tRNA synthetase [Vibrio splendidus LGP32]
Length = 461
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/421 (46%), Positives = 262/421 (62%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 NFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV GDV F V+K YG+LS Q L+ +AG RV +DS KR+P DF
Sbjct: 122 IELVEKLIQRGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDIDSAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ +V +P E+ + + F M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDVTAAP-----------AGGEEYVTR----FSTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F+ A +N +K + IE + ++E+ I+G+
Sbjct: 347 NDDFNTPEAYSVLFEMA-----REINRIKTES--------IEKASALGALMRELADIIGI 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|392551107|ref|ZP_10298244.1| cysteinyl-tRNA ligase [Pseudoalteromonas spongiae UST010723-006]
Length = 458
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/402 (49%), Positives = 248/402 (61%), Gaps = 23/402 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++T+QKE F P+V GKVGMYVCG+T YD H+GHAR VSFD++ R+L H +V
Sbjct: 2 LQIYNTLTRQKEAFKPLVAGKVGMYVCGITIYDYCHVGHARTYVSFDVMNRFLRHSGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RAN+ GE +L+ R + D L LP +P V+ HM++I
Sbjct: 62 TYVRNITDVDDKIIKRANENGEAIDALTVRMTKAMHEDFDALNMLPADIEPTVTGHMDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+MI ++I+ AYV GDV F V YG LS Q L+ +AG RV V K +P DF
Sbjct: 122 IEMIERLIDKKHAYVASNGDVLFDVSTFEQYGSLSQQDLDMLQAGARVDVAEGKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKVDEPSWSSPWGEGRPGWHIECSAMSNKHLGAHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+ W+H G V N EKMSKSLGNFFT+R + + Y ++R FLI+ HYRS
Sbjct: 242 SCCATGEKYVNTWIHTGMVQVNKEKMSKSLGNFFTLRDVLKEYDRESVRFFLINGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ IY L+ EV + E+ AR N A M
Sbjct: 302 LNYSTENLEQARAAMERIYTALRGVEVVETSL-ENDYVARFNTA---------------M 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ-QLSLI 418
+DD NT L F+ + +N LK + Q QL+ I
Sbjct: 346 NDDFNTPEALPVIFE-----LAKEINRLKDEDANQAGQLAFI 382
>gi|323144957|ref|ZP_08079517.1| cysteine--tRNA ligase [Succinatimonas hippei YIT 12066]
gi|322415236|gb|EFY06010.1| cysteine--tRNA ligase [Succinatimonas hippei YIT 12066]
Length = 470
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/391 (48%), Positives = 246/391 (62%), Gaps = 18/391 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N+++++KE F PI G++GMYVCGVT YDL H+GHAR V+FD++ RYL + +V
Sbjct: 15 LQIHNTISRKKEEFKPINEGQIGMYVCGVTVYDLCHIGHARTFVNFDMVVRYLRYRGYKV 74
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y+RN TD+DDKII+RA++ + L+ + E D L + P +PR ++ + +I
Sbjct: 75 RYIRNITDIDDKIIKRAHERKVSAKELAENFIVEMHKDFDALNIMRPDEEPRATETIPEI 134
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I+N AYV + GDV FA++ YGRLSGQ LE AG R+ ++ KRNP DF
Sbjct: 135 IALVQRLIDNGNAYVADNGDVMFAIDTFKQYGRLSGQNLEELEAGARIEIEKTKRNPFDF 194
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ YL FDIHGGG DLIFPHHENEIAQ
Sbjct: 195 VLWKMSKPGEPSWSSPWGDGRPGWHIECSAMNLKYLGENFDIHGGGSDLIFPHHENEIAQ 254
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC AC V+YWMH+G V N+EKMSKSL NFFTIR + E Y +R FL+SA YRSP
Sbjct: 255 SCCACHSKYVNYWMHSGMVMINHEKMSKSLNNFFTIRDVLEHYDAETIRFFLLSAQYRSP 314
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ LD A ++ +Y L+D + P + G ED K F M
Sbjct: 315 LNYTQENLDKAKASLARLYTALRD----VVPVKAEG---------EDEYTK---RFKELM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK 408
DD NT + F D K +N K K
Sbjct: 359 DDDFNTPGAMAVLF-DLAKAVNKEEGETKAK 388
>gi|190150242|ref|YP_001968767.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|307263581|ref|ZP_07545196.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|229558612|sp|B3GXR0.1|SYC_ACTP7 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|189915373|gb|ACE61625.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|306871224|gb|EFN02953.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 459
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/421 (47%), Positives = 255/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINSNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D DL L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNEMCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ LD A A+ +Y +L+ C++++ E + + F A M
Sbjct: 302 LNYSLNNLDLARSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ I +N LK + + + +KE+ +LGL
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTED--------MAKANGLAARLKELAGVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|449144349|ref|ZP_21775164.1| cysteinyl-tRNA synthetase [Vibrio mimicus CAIM 602]
gi|449079850|gb|EMB50769.1| cysteinyl-tRNA synthetase [Vibrio mimicus CAIM 602]
Length = 459
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/435 (47%), Positives = 268/435 (61%), Gaps = 37/435 (8%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V K YG+LS Q LE +AG RV V++ KR+P DF
Sbjct: 122 IALVQRLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLEQLQAGARVDVEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ +++ F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEEYLSR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + L+ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDLTNASALGSLMRELADVIGIL 394
Query: 436 GLLPPGAYSEVKTAF 450
Y E +T F
Sbjct: 395 -------YQEPETFF 402
>gi|165976334|ref|YP_001651927.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|307261399|ref|ZP_07543074.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|229558613|sp|B0BPJ8.1|SYC_ACTPJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|165876435|gb|ABY69483.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|306869130|gb|EFN00932.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
Length = 459
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/422 (47%), Positives = 257/422 (60%), Gaps = 31/422 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D DL L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ LD A A+ +Y +L+ C++++ E + + F A M
Sbjct: 302 LNYSLNNLDLARSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ I +N LK + K L++ +KE+ +LG
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTEDMAKANGLAV---------RLKELAGVLG 392
Query: 437 LL 438
LL
Sbjct: 393 LL 394
>gi|46143889|ref|ZP_00133878.2| COG0215: Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208389|ref|YP_001053614.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|187629818|sp|A3N0S3.1|SYC_ACTP2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|126097181|gb|ABN74009.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
5b str. L20]
Length = 459
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/422 (47%), Positives = 257/422 (60%), Gaps = 31/422 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D DL L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ LD A A+ +Y +L+ C++++ E + + F A M
Sbjct: 302 LNYSLDNLDLARSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ I +N LK + K L++ +KE+ +LG
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTEDMAKANGLAV---------RLKELAGVLG 392
Query: 437 LL 438
LL
Sbjct: 393 LL 394
>gi|258621406|ref|ZP_05716440.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM573]
gi|262171188|ref|ZP_06038866.1| cysteinyl-tRNA synthetase [Vibrio mimicus MB-451]
gi|258586794|gb|EEW11509.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM573]
gi|261892264|gb|EEY38250.1| cysteinyl-tRNA synthetase [Vibrio mimicus MB-451]
Length = 459
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/435 (47%), Positives = 268/435 (61%), Gaps = 37/435 (8%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V K YG+LS Q LE +AG RV V++ KR+P DF
Sbjct: 122 IALVQRLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLEQLQAGARVDVEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ +++ F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEEYLSR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + L+ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDLTNASALGSLMRELADVIGIL 394
Query: 436 GLLPPGAYSEVKTAF 450
Y E +T F
Sbjct: 395 -------YQEPETFF 402
>gi|322833979|ref|YP_004214006.1| cysteinyl-tRNA synthetase [Rahnella sp. Y9602]
gi|384259159|ref|YP_005403093.1| cysteinyl-tRNA synthetase [Rahnella aquatilis HX2]
gi|321169180|gb|ADW74879.1| cysteinyl-tRNA synthetase [Rahnella sp. Y9602]
gi|380755135|gb|AFE59526.1| cysteinyl-tRNA synthetase [Rahnella aquatilis HX2]
Length = 463
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/422 (46%), Positives = 260/422 (61%), Gaps = 30/422 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE ++L++R E D A L LPP +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRAAENGETFMALTDRMIAEMHADFASLNILPPDSEPRATQHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR-KRNPAD 196
D++ ++I+ D AYV GDV F VE P+YG LS Q L+ +AG RV V++ KRNP D
Sbjct: 122 IDIVQKLIDRDHAYVASNGDVMFWVESDPDYGLLSRQDLDQLQAGARVEVEANVKRNPMD 181
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIA
Sbjct: 182 FVLWKMSKPGEPSWTSPWGEGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIA 241
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V+ WMH+G V + EKMSKSL NFFT+R + + Y ++R+FL+S HYRS
Sbjct: 242 QSSCAHDGPYVNTWMHSGMVMIDREKMSKSLDNFFTVRDVLKYYDAESVRYFLMSGHYRS 301
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
LNYS L A ++ +Y L+ + A +P R F A
Sbjct: 302 QLNYSEENLKLARTSMERLYTALRGTDAAATPAGGEAFVTR---------------FRAA 346
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT + F D + IN + K + LS L E++++ +LG
Sbjct: 347 MDDDFNTPEAYSVLF-DMARDIN---------RLKTEDLSAANGLAA---ELRQLAGVLG 393
Query: 437 LL 438
LL
Sbjct: 394 LL 395
>gi|326795514|ref|YP_004313334.1| cysteinyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
gi|326546278|gb|ADZ91498.1| cysteinyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
Length = 461
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/421 (47%), Positives = 262/421 (62%), Gaps = 30/421 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++T QKE F PIV GK+GMYVCG T YD H+GHARA +SFD++ R L HL ++
Sbjct: 2 LRIYNTLTGQKEEFKPIVEGKIGMYVCGNTVYDFCHIGHARAMISFDVISRILRHLDYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + GE P L+ R + D L LPP +P+ ++ M++I
Sbjct: 62 TYVRNITDVDDKIIKRAAENGELPSDLTERMIEAQQEDEKALGNLPPDREPKATEFMQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+MI +++ AY + GDVF+ + +YG+L+ ++LE AG RV V K +PADF
Sbjct: 122 INMIKTLVDKGFAYQSDSGDVFYRASRFTDYGKLNNRKLEEMLAGARVEVTESKEHPADF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK K GE WDSPWG GRPGWHIECSAMS + L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKPVKEGEVHWDSPWGKGRPGWHIECSAMSTNCLGDHFDIHGGGPDLKFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+YWMH G V NNEKMSKSLGNFFTIR++ + Y+P LR+ ++S+HYRSP
Sbjct: 242 SEAATGKDYVNYWMHCGAVRVNNEKMSKSLGNFFTIREVLKLYNPEVLRYLMVSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++YS L+ A A+ +Y L+D ++ P + D R F A +
Sbjct: 302 IDYSDQSLNDAKVALERLYNALRD------------QSCSEIPESSD----YRTRFTAAL 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT L+ F D ++ +N + K + L E+L E+ + +LGL
Sbjct: 346 NDDFNTPVALSVLF-DLVRDLN---------KAKTESAELAETLAA---ELTNLASVLGL 392
Query: 438 L 438
L
Sbjct: 393 L 393
>gi|381196562|ref|ZP_09903904.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii WJ10621]
Length = 473
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 265/421 (62%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P V G + MYVCG+T YD H+GHAR V+FD + R+L V Y
Sbjct: 6 LYNSEQRKKVEFVPRVEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWSVKY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII+RAN+ GE+ L++R+ Q D +L CL P PR +D+++Q++
Sbjct: 66 VRNITDIDDKIIKRANENGESITQLTDRFIQAMNEDAENLGCLHPDEAPRATDYIDQMQS 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++ AY GDV+F VEK YGRLSG++LE+ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVEKGTAYPSANGDVYFQVEKFAKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + +++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMDKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A A+ Y + + + Q +G T +++ E L + F++ M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFKAYQ------QAYGDT-QVDTLDE----TLLERFNSAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K+Q +Q +LR + N ILGL
Sbjct: 355 RDDFNTAEAIAVLFE-----VNKELNRAVKEQQTEQAAIYYATLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|392392061|ref|YP_006428663.1| cysteinyl-tRNA synthetase [Desulfitobacterium dehalogenans ATCC
51507]
gi|390523139|gb|AFL98869.1| cysteinyl-tRNA synthetase [Desulfitobacterium dehalogenans ATCC
51507]
Length = 477
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/385 (46%), Positives = 244/385 (63%), Gaps = 2/385 (0%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L+++N+M+ QKE F P GKVGMY CG T Y+ H+G+ R V FD++ RYL +
Sbjct: 1 MALRLFNTMSHQKEEFIPREEGKVGMYTCGPTVYNYFHVGNGRMLVVFDMIRRYLLYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+V+NFTD+DDKII R ++ G +PL L+ +Y +EY D L +P + P+ +DH+
Sbjct: 61 DVTFVQNFTDIDDKIINRGHEEGRDPLELAEKYIEEYFKDAKALNLMPASIHPKATDHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ ++I + AY VEGDV+FAV+K YG+LSG+ LE+ +AG RV V RKRNP D
Sbjct: 121 EMIEIIKGLEEQGLAYAVEGDVYFAVDKLSAYGKLSGRTLEDMQAGARVEVGERKRNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECSAMS YL S FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKNAKPGEPFWESPWGKGRPGWHIECSAMSLKYLGSGFDIHGGGGDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
QS + YWMHN +T N +KMSKSLGNFFT+R+I E + +R +L+ HYR
Sbjct: 241 QSEGYLHGETFARYWMHNAFLTFNQQKMSKSLGNFFTVREILEHFPGEVIRFYLLGTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPL++ L A + + +++ + AL + A + D + R EF
Sbjct: 301 SPLDFDDENLRMAQKGLERLQTSIRLADEALGRKGQACADAAADEKLRDAAEEARKEFEE 360
Query: 376 RMSDDLNTSHILTGAFQDALKFINS 400
M DD N++ F+ K IN+
Sbjct: 361 AMDDDFNSALAYASLFELG-KVINA 384
>gi|379335352|gb|AFD03335.1| cysteinyl-tRNA synthetase [uncultured bacterium W5-15b]
Length = 480
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/429 (43%), Positives = 269/429 (62%), Gaps = 19/429 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YNS+TQ+KE KV MY CG T YD +HLGHAR+AVSFD++ R+L + +V
Sbjct: 8 ISVYNSLTQKKEEMQTHEGNKVRMYACGPTVYDSAHLGHARSAVSFDIIQRFLRYAGYDV 67
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN+TD+DDKII RAN+LG +S ++ QEY DMA + P +P+V++H+EQI
Sbjct: 68 TFVRNYTDIDDKIINRANELGVPAKEISEKFIQEYKDDMASIGVQTPDIEPKVTEHIEQI 127
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++I II+ YV E DVFF+V K YG+LS + ++N G R+ V+ +K++P DFA
Sbjct: 128 IELIQTIIDRGHGYVSENDVFFSVRKFKGYGKLSKRSVDNMLEGVRIDVNEKKQDPLDFA 187
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEPSW SPWG GRPGWHIECS MS YL + F+IHGGG DLIFPHHENEIAQS
Sbjct: 188 LWKGAKKGEPSWPSPWGNGRPGWHIECSVMSMEYLGTNFEIHGGGKDLIFPHHENEIAQS 247
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA + +W+HNG + N+EKMSKSLGNFFT++ +R+ P ++R F +S HY++P
Sbjct: 248 EAASGEQFAKHWLHNGLIQINSEKMSKSLGNFFTVQNAVKRWTPESIRFFFLSHHYQNPA 307
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++S +D ++ IY TL+ LS + ++P ++ + K R+ + M
Sbjct: 308 DFSEQVMDDTEISLERIYTTLKRAN-DLSSVSDS-----VDPELQENLEKFRENWFRAMC 361
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
D+ NT+ + F D ++ IN S++ ++L E+K+ ++G+L
Sbjct: 362 DNFNTADAIGNLF-DLVRAINKSIDA----------NGWTKTLSDTLEEIKKFSSVVGIL 410
Query: 439 P--PGAYSE 445
P Y E
Sbjct: 411 EKDPDEYLE 419
>gi|389580502|ref|ZP_10170529.1| cysteinyl-tRNA synthetase [Desulfobacter postgatei 2ac9]
gi|389402137|gb|EIM64359.1| cysteinyl-tRNA synthetase [Desulfobacter postgatei 2ac9]
Length = 480
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/361 (50%), Positives = 245/361 (67%), Gaps = 4/361 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L+IYN+++ +KE F PI KVGMYVCG T YD SH+GHAR+ V FD++YR+L L
Sbjct: 1 MSLRIYNTLSGKKEEFVPIRANKVGMYVCGPTVYDTSHIGHARSVVVFDMVYRWLMQLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRNFTDVDDKII+++N+ G++ +++ +Y E+ +M L L PT P+ ++H++
Sbjct: 61 EVTYVRNFTDVDDKIIKKSNETGDSCTAITTKYIDEFHNEMDALNVLRPTIAPKATEHID 120
Query: 137 QIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
I + ++I+ AY VEG DV+F++ YG+LS + ++ +AG R+AVD +KR+P
Sbjct: 121 HIIRFVQRLIDLGKAYHVEGGDVYFSISSFSEYGKLSHRNPDDMQAGARIAVDEKKRSPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AK GEP WDSPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEI
Sbjct: 181 DFTLWKPAKPGEPYWDSPWGKGRPGWHIECSAMSYEYLGESFDIHGGGKDLIFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A+ V YW+HNG V NNEKMSKSLGNF I+++ Y P +R FL+S HYR
Sbjct: 241 AQSEASFGVPFVKYWIHNGFVDINNEKMSKSLGNFTMIKEVLADYSPEVIRMFLLSKHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVA-LSPFQEHGKTARINPAAEDCINKLRDEFH 374
SP++YS + S A+ IY L+ + A ++P G P D + L D+F+
Sbjct: 301 SPIDYSENSMREVSVALDRIYGFLERLDKAGITPPDAAG--GEHGPLWADIVEALNDDFN 358
Query: 375 A 375
+
Sbjct: 359 S 359
>gi|307256969|ref|ZP_07538746.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306864544|gb|EFM96450.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
Length = 459
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/422 (47%), Positives = 257/422 (60%), Gaps = 31/422 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D DL L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ LD A A+ +Y +L+ C++++ E + + F A M
Sbjct: 302 LNYSLNNLDLARSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ I +N LK + K L++ +KE+ +LG
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTEDMAKANGLAVC---------LKELAAVLG 392
Query: 437 LL 438
LL
Sbjct: 393 LL 394
>gi|342215232|ref|ZP_08707886.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 780 str. F0422]
gi|341588729|gb|EGS32105.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 780 str. F0422]
Length = 482
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/428 (48%), Positives = 269/428 (62%), Gaps = 16/428 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L ++N+MT++K +F P+ G+V +YVCGVT Y+ H+G+AR V++D + RYL H+ +V
Sbjct: 4 LTVFNTMTREKSVFQPVKEGEVSIYVCGVTPYNHPHIGNARPFVTWDTIRRYLSHVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY++NFTDVDDKII +N G +S+RY Y M L PRVS HME+I
Sbjct: 64 TYIQNFTDVDDKIINTSNGEGVAWNVISDRYIDAYYDVMDALHVRRADVYPRVSTHMEEI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MIT +I+N AY V+GDV++ VEK +YG+LSG+ L++ AG RV VD RK NP DFA
Sbjct: 124 ISMITTLIDNGYAYAVDGDVYYRVEKFEHYGKLSGRTLDDMEAGARVDVDDRKENPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL +FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKAAKPGEPFWESPWGQGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 CAACQDSN--VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C + + V YW+HNG +T N EKMSKSL NFF ++ I E+Y ALR FL+S HYRS
Sbjct: 244 -EGCSEHHPAVRYWVHNGFITINQEKMSKSLNNFFLVKDILEQYSADALRFFLLSTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLR---DEF 373
PL++S +LD A+ A+ +QT+ D + L E A + + R +EF
Sbjct: 303 PLDFSDERLDEATKAIER-FQTVIDNLLYLESRPE----GLCELEAAELLKNARNYEEEF 357
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
A MSDD NT+ + T K IN ++ S I +++I K +L
Sbjct: 358 EAAMSDDFNTA-LATAPIYGLAKEINIYYQSVQSCDGTVCH-STIGEVKEI---FKMMLD 412
Query: 434 ILGLLPPG 441
ILGLL G
Sbjct: 413 ILGLLEEG 420
>gi|397904926|ref|ZP_10505801.1| Cysteinyl-tRNA synthetase [Caloramator australicus RC3]
gi|397162020|emb|CCJ33135.1| Cysteinyl-tRNA synthetase [Caloramator australicus RC3]
Length = 467
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/405 (44%), Positives = 257/405 (63%), Gaps = 2/405 (0%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+KIYN+MT+QKE+F PI G+V MY CG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIKIYNTMTRQKEVFNPITPGEVKMYACGPTVYNYFHIGNARTFIVFDTIRRYLEYRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V +++NFTD+DDK+IRRAN+ G ++ +Y +EY D L+ T PR ++ +
Sbjct: 61 KVKFIQNFTDIDDKLIRRANEEGTTVKEVAEKYIKEYYKDADGLKIKRATVNPRATEFIG 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I + +++ AYVV+GDV+F K YG+LS Q +E+ AG R+ +D RKRNP D
Sbjct: 121 EIIAFVKDLVDKGYAYVVDGDVYFDTTKFKEYGKLSHQSIEDLEAGARIEIDERKRNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA K GEP+W+SPWG GRPGWHIECS M+ L DIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKAKKEGEPAWESPWGEGRPGWHIECSTMACSLLGETIDIHGGGADLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A +YWMH ++ NN+KMSKSL NFFT R+I E+Y +R F++S HYR+
Sbjct: 241 QSEARNGKPFANYWMHVAYLNVNNQKMSKSLNNFFTAREILEKYDAEVVRLFMLSGHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S+ LD A A+ +Y + + E + ++ TA + ++ R+ +
Sbjct: 301 PINFSIELLDQAKAALERLYNAIANLEHVIETSEDRELTAE-ELEFFNRLDSFRERYIEV 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
M DD NT+ ++ F D ++ +N+++ K+ Q+ L LI L
Sbjct: 360 MDDDFNTADGISVIF-DLVREVNTNIKEGSPKKLAQKALDLIREL 403
>gi|254973704|ref|ZP_05270176.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-66c26]
gi|255091094|ref|ZP_05320572.1| cysteinyl-tRNA synthetase [Clostridium difficile CIP 107932]
gi|255312749|ref|ZP_05354332.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-76w55]
gi|255515509|ref|ZP_05383185.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-97b34]
gi|255648602|ref|ZP_05395504.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-37x79]
gi|306518726|ref|ZP_07405073.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-32g58]
gi|384359372|ref|YP_006197224.1| cysteinyl-tRNA synthetase [Clostridium difficile BI1]
Length = 465
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/385 (47%), Positives = 251/385 (65%), Gaps = 2/385 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T+ KE F P+ GKV MYVCG T Y+ H+G+AR + FD L RYLE+ +V
Sbjct: 1 MKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII R+++ G +P ++ +Y +EY VD L T P+V+D+++QI
Sbjct: 61 TYVQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQQI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I ++ + AY V GDV+F K YG+LSGQ+ E+ AG R+ V+ +KR+P DF
Sbjct: 121 IEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIAQS
Sbjct: 181 LWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YWMHNG++ N+EKMSKS GNFFT+R I++ Y +R F++SAHYR+P+
Sbjct: 241 EARSGKIFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRNPV 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+ A + +Y T + E LS E T + ++ ++ R +F M
Sbjct: 301 NFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE-LDDFRQKFIDAMD 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLN 403
DD+NT+ ++ F+ A K INS+++
Sbjct: 360 DDVNTADAVSVIFELA-KLINSNVD 383
>gi|149191898|ref|ZP_01870131.1| cysteinyl-tRNA synthetase [Vibrio shilonii AK1]
gi|148834246|gb|EDL51250.1| cysteinyl-tRNA synthetase [Vibrio shilonii AK1]
Length = 460
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/418 (46%), Positives = 261/418 (62%), Gaps = 26/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL ++ ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYVGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 KFVRNITDIDDKIIKRANENGESCESLTERLIGEMHADFDALNMKRPDVEPRATEFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I+ AYV + GDV F V K YG+LS Q L+ +AG RV V+S KR+P DF
Sbjct: 122 IELVEKLIDRGFAYVADNGDVMFEVSKFDKYGKLSKQDLDQLQAGARVDVESAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + + Y P +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLDHYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y +L+ ++ P E+ + + F A M
Sbjct: 302 LNYSEDNLNQARSALERLYTSLRGLDLDAEP-----------TGGEEYVTR----FTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+DD NT + F D + IN + K L L + E+ +V+ IL
Sbjct: 347 NDDFNTPEAYSVLF-DMAREIN---------RLKTVDLGQASQLGALMRELADVIGIL 394
>gi|262369707|ref|ZP_06063035.1| cysteinyl-tRNA synthetase [Acinetobacter johnsonii SH046]
gi|262315775|gb|EEY96814.1| cysteinyl-tRNA synthetase [Acinetobacter johnsonii SH046]
Length = 473
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 265/421 (62%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P V G + MYVCG+T YD H+GHAR V+FD + R+L V Y
Sbjct: 6 LYNSEQRKKVEFVPRVEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWSVKY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII+RAN+ GE+ L++R+ Q D +L CL P PR +D+++Q++
Sbjct: 66 VRNITDIDDKIIKRANENGESITQLTDRFIQAMNEDAENLGCLHPDEAPRATDYIDQMQS 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++ AY GDV+F VEK YGRLSG++LE+ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVEKGTAYPSANGDVYFQVEKFAKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKDNEPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + +++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMDKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A A+ Y + + + Q +G T +++ E L + F++ M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFKAYQ------QAYGDT-QVDTLDE----TLLERFNSAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K+Q +Q +LR + N ILGL
Sbjct: 355 RDDFNTAEAIAVLFE-----VNKELNRAVKEQQAEQAAIYYATLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|357419735|ref|YP_004932727.1| cysteinyl-tRNA synthetase [Thermovirga lienii DSM 17291]
gi|355397201|gb|AER66630.1| cysteinyl-tRNA synthetase [Thermovirga lienii DSM 17291]
Length = 476
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/385 (46%), Positives = 250/385 (64%), Gaps = 5/385 (1%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
T+ IYN +T+ KE +GKVG+Y CG T YD H+G+AR + FD R+LE E
Sbjct: 3 TITIYNDLTRTKEPLVTQKKGKVGIYTCGPTVYDYFHIGNARPFIVFDAFRRFLEAQGYE 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VT+V+NFTD+DDK+I RA +LG L+ ++ + Y D L PT PR ++H+++
Sbjct: 63 VTFVQNFTDIDDKMINRAKELGITVPQLAEKFIEAYYEDADALGIKRPTVAPRATEHIDE 122
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I +I +I+ N AYVV GDV+F V+ P YG+LS Q LE ++G RV ++ K++P DF
Sbjct: 123 IISLIEKIMKNGHAYVVNGDVYFDVQSYPEYGKLSKQTLEELQSGARVEINPNKKHPLDF 182
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKA K GEPSW SPWG GRPGWHIECSAM+ YL DIH GG DL+FPHHENEIAQ
Sbjct: 183 ALWKAKKPGEPSWPSPWGEGRPGWHIECSAMAIKYLGETIDIHTGGSDLVFPHHENEIAQ 242
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AA V YWMHNG++ N EKMSKSLGNF T R+ +++HP+A+R F++SAHYR+P
Sbjct: 243 AEAATGKPFVKYWMHNGYLMINAEKMSKSLGNFLTAREARKKFHPVAIRLFMLSAHYRTP 302
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LN+SV L +++ + +++C L +E + + + IN L+++F + +
Sbjct: 303 LNFSVENLINSAKGA----ERIRNCWNELLNAEERCYDSGTSMGETETINSLKEKFDSNL 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSL 402
DD NT+ + G +A+K +N L
Sbjct: 359 KDDFNTAGAI-GVLFEAVKIVNQVL 382
>gi|303253060|ref|ZP_07339211.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|307247903|ref|ZP_07529938.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|302648092|gb|EFL78297.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|306855594|gb|EFM87762.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
Length = 459
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/422 (47%), Positives = 257/422 (60%), Gaps = 31/422 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D DL L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ LD A A+ +Y +L+ C++++ E + + F A M
Sbjct: 302 LNYSLDNLDLARSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ + +N LK + K L++ +KE+ +LG
Sbjct: 347 DDDFNTPGALAVLFE-----VAREVNKLKTEDMAKANGLAV---------RLKELAGVLG 392
Query: 437 LL 438
LL
Sbjct: 393 LL 394
>gi|410658554|ref|YP_006910925.1| Cysteinyl-tRNA synthetase [Dehalobacter sp. DCA]
gi|410661541|ref|YP_006913912.1| Cysteinyl-tRNA synthetase [Dehalobacter sp. CF]
gi|409020909|gb|AFV02940.1| Cysteinyl-tRNA synthetase [Dehalobacter sp. DCA]
gi|409023897|gb|AFV05927.1| Cysteinyl-tRNA synthetase [Dehalobacter sp. CF]
Length = 487
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/398 (46%), Positives = 254/398 (63%), Gaps = 14/398 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +++YN++T++KE F P GK MY CG T Y+ HLG+AR V FD++ RYL H
Sbjct: 1 MAIRLYNTLTRRKEAFVPREPGKASMYACGPTTYNYFHLGNARMLVVFDMVRRYLIHKGF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
VTYV+NFTDVDDKII RA + G +P++L+ +Y EY D L LP P+ ++H+
Sbjct: 61 VVTYVQNFTDVDDKIINRAAEEGCDPIALAGKYINEYFTDAKALNILPADIHPKATEHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ D+I ++ AY ++GDV+FAV+K P YG+LSG+ LE+ +AG RV VD +K NP D
Sbjct: 121 EMIDIIRRLEEKGLAYNIDGDVYFAVDKFPGYGKLSGRTLEDMQAGARVEVDDKKHNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AKAGEP W+SPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKKAKAGEPFWESPWGKGRPGWHIECSAMSLKYLGPGFDIHGGGGDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
QS + + YWMHN +T N EKMSKSLGNFF +R +T ++ +R +L+ HYR
Sbjct: 241 QSEGCLEGQQFARYWMHNAFITINQEKMSKSLGNFFLVRDVTGKFPGDVIRFYLLGTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARI----------NPAAED 364
SPL++ +L AS + + +++ + AL Q + G T I N A+
Sbjct: 301 SPLDFDDEKLVMASKGLDRLKNSVRLAKEALGKAQGKEGMTFGIIAVNRDLKTDNEMAQA 360
Query: 365 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 402
C+ + R+ F M DD N++ F+ A K IN+ L
Sbjct: 361 CL-EARNAFEQAMDDDFNSAQAYAALFELA-KGINTYL 396
>gi|313672372|ref|YP_004050483.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
19672]
gi|312939128|gb|ADR18320.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
19672]
Length = 479
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/425 (43%), Positives = 271/425 (63%), Gaps = 13/425 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+++ +KE+FTP+ KV +YVCGVT YD H+GHAR+++ FD + RYL++ +V
Sbjct: 2 LKIFNTLSGEKEVFTPLEDNKVKIYVCGVTVYDYCHIGHARSSIVFDTIRRYLKYKGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTDVDDKII+RAN+ ++ +++ + + + DM L L P Y PR +++++ +
Sbjct: 62 TFVKNFTDVDDKIIKRANEENKSINEITDFFIKAHDEDMDKLNILRPDYTPRATEYIDGM 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ ++I AY GDV+F V +YG+LS + L++ AG RV V+ K +P DFA
Sbjct: 122 IKLCEKLIEKGFAYESNGDVYFKVRAFKDYGKLSKRDLDDLLAGARVDVNEIKEDPLDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK +K GEP WDSPWG GRPGWHIECS MSA L FDIHGGG DLIFPHHENEIAQS
Sbjct: 182 LWKRSKEGEPGWDSPWGRGRPGWHIECSVMSAEILGIPFDIHGGGKDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA YW+HNG V N EKMSKSLGNFFTIR + + P LR FL++ HYRSPL
Sbjct: 242 EAAEGKEFARYWIHNGFVNINKEKMSKSLGNFFTIRDVLKEVDPEVLRFFLLTTHYRSPL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++S L A +A+ IY + + E A+ ++ + +I+ + +++ + +F M
Sbjct: 302 DFSFENLLEAENALDRIYTAIDELESAVFNNKKPAQKGKID----EIVDRFKRDFEESMD 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR-ILGL 437
DD NT+ ++ F+ + +N+L ++ + L+ L+ EVK ++R +LG+
Sbjct: 358 DDFNTASAISNIFE-----LIKGVNLLLSERLNSEDLNY---LKVRFEEVKAIIRDVLGI 409
Query: 438 LPPGA 442
L A
Sbjct: 410 LTKTA 414
>gi|308275277|emb|CBX31873.1| Cysteinyl-tRNA synthetase [uncultured Desulfobacterium sp.]
Length = 413
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/425 (44%), Positives = 273/425 (64%), Gaps = 22/425 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L+IYN++ ++K F P+ GKV MYVCG T YD H+GHAR+ + FD++ +YL
Sbjct: 1 MSLRIYNTIERKKVPFEPVQPGKVSMYVCGPTVYDSCHIGHARSVIVFDVILKYLNATGL 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRNFTDVDDKII RA LG ++ RY +E+ DM L T +P+ ++H++
Sbjct: 61 EVTYVRNFTDVDDKIINRAVQLGIESHEVAERYIKEFYEDMDALNIKRATIEPKATEHID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I +I ++ + AY ++GD++++V+K +YG+LSG++LE+ AG RV +D RK NP D
Sbjct: 121 KIIALIEILLKKEIAYRIDGDIYYSVDKFKDYGKLSGRKLEDMEAGARVEIDERKNNPFD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+ K GEP W+SPWG GRPGWHIECSAMS+ YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKSQKPGEPYWESPWGRGRPGWHIECSAMSSAYLGETFDIHGGGKDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YW+HNG V N+EKMSKSLGNF I+ I + YHP ++R FL+S HYRS
Sbjct: 241 QSEGAFEKPFAKYWVHNGFVNINHEKMSKSLGNFLLIKDILKSYHPDSVRLFLLSNHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN---KLRDEF 373
P++++ ++ + A+ IY +Q E + A I +D IN ++F
Sbjct: 301 PIDFTDKAMEESEAALDKIYSAIQRVE----------EIADI--TGKDFINYPEGYWEKF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT+ + G D+++ IN +L + + ++I S I +++++
Sbjct: 349 CESMDDDFNTAKGI-GYLFDSVRHIN---RLLDENSNSDEIKTIINS---IYADIRKMGD 401
Query: 434 ILGLL 438
++G+L
Sbjct: 402 VIGIL 406
>gi|392959715|ref|ZP_10325196.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
gi|421056356|ref|ZP_15519274.1| cysteinyl-tRNA synthetase [Pelosinus fermentans B4]
gi|421070069|ref|ZP_15531206.1| cysteinyl-tRNA synthetase [Pelosinus fermentans A11]
gi|392438194|gb|EIW16052.1| cysteinyl-tRNA synthetase [Pelosinus fermentans B4]
gi|392448807|gb|EIW25984.1| cysteinyl-tRNA synthetase [Pelosinus fermentans A11]
gi|392456099|gb|EIW32858.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
Length = 481
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/382 (49%), Positives = 251/382 (65%), Gaps = 14/382 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LK+YN+MT+QKE F P GKV MYVCGVT Y+ H+G+AR +++D++ RYLEH +
Sbjct: 1 MALKVYNTMTRQKEEFIPHEAGKVKMYVCGVTPYNHPHIGNARPFITWDVIKRYLEHCRY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV +V+NFTDVDDKII+ AN G ++NRY Y M L P VSDHM
Sbjct: 61 EVFHVQNFTDVDDKIIKAANTEGVTWDVIANRYIASYFEVMDKLNIRRADIYPTVSDHMT 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I +++ ++ AY+V+GDV+++VEK +YG+LSG+ +E+ +AG RV VD RK +P D
Sbjct: 121 EIINIVEGLVAKGYAYIVDGDVYYSVEKFNDYGKLSGRDIEDMKAGARVDVDERKHHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+AK GEP+W+SPWG GRPGWHIEC+AMS YL + FD HGGG DLIFPHHENEIA
Sbjct: 181 FALWKSAKPGEPAWESPWGKGRPGWHIECTAMSLKYLGNSFDFHGGGSDLIFPHHENEIA 240
Query: 257 QSCAACQDSN--VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
QS A ++S V YW+HNG +T N EKMSKSLGNFF ++ I E Y P LR F++S HY
Sbjct: 241 QSEAFVEESQPFVRYWLHNGFITVNEEKMSKSLGNFFLVKDILEHYSPEVLRFFVLSTHY 300
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK---TARINPAAE--DCINKL 369
RSPL++S +L A ++L+ A+ + GK A N A E +
Sbjct: 301 RSPLDFSDERLSEAQ-------RSLERLRTAVENVLQLGKMPDAANENKADELVKVARQA 353
Query: 370 RDEFHARMSDDLNTSHILTGAF 391
++F M DD NT+ ++ F
Sbjct: 354 EEDFCKAMDDDFNTALAISVMF 375
>gi|114563765|ref|YP_751278.1| cysteinyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
gi|122299286|sp|Q07ZX5.1|SYC_SHEFN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|114335058|gb|ABI72440.1| cysteinyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
Length = 460
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 233/350 (66%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+++ K+ F PI GK+GMYVCGVT YDL H+GH R VSFD++ RYL ++ EV
Sbjct: 2 LKIYNSISRDKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYIGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RA + E+ SL+ R E D L P ++PR + H+E+I
Sbjct: 62 NFQRNITDVDDKIIKRAAENNESCESLTERLIAEMHQDFDALNMKRPDFEPRATLHIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++++ D AYV GDV F+V P YG+LSGQ L+ +AG RV +D+ KRNP DF
Sbjct: 122 IDMVQRLLDRDHAYVASNGDVLFSVASFPEYGQLSGQNLDQLQAGARVEIDNAKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSL NFFTIR + + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLDNFFTIRDVLKHYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ ++ + A+ A +D N
Sbjct: 302 LNYSEDNLKQARAALERLYTALKGLDLTVDAAPAEAFVAKFKSAMDDDFN 351
>gi|258626834|ref|ZP_05721641.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM603]
gi|258580881|gb|EEW05823.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM603]
Length = 459
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/435 (47%), Positives = 268/435 (61%), Gaps = 37/435 (8%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V K YG+LS Q LE +AG RV V++ KR+P DF
Sbjct: 122 IALVQRLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLEQLQAGARVDVEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ +++ F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RRVPAAGGEEYLSR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + L+ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDLTNASALGSLMRELADVIGIL 394
Query: 436 GLLPPGAYSEVKTAF 450
Y E +T F
Sbjct: 395 -------YQEPETFF 402
>gi|363893842|ref|ZP_09320936.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium ACC19a]
gi|361963344|gb|EHL16422.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium ACC19a]
Length = 466
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/411 (44%), Positives = 264/411 (64%), Gaps = 8/411 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN+M+ QKE F + +GKV MY CG T Y+ H+G+AR + FD L YLE++ EV
Sbjct: 1 MKIYNTMSSQKEEFKELEKGKVKMYSCGPTVYNYFHIGNARPFIVFDTLRNYLEYIGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTDVDDKII +AN+ G P+ L+++Y +EY D + T PRV++++++I
Sbjct: 61 TFVQNFTDVDDKIIIKANEEGITPIQLADKYIEEYFKDAKAIGIRKATVHPRVTENIKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D I +I+ AYV+ DV+F V+K YG+LS + +++ +G R+ ++ KR P DFA
Sbjct: 121 IDFIQDLIDKGFAYVLGNDVYFEVKKFKEYGKLSHKNIDDLLSGARIEINDEKRAPIDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GE WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKGKKEGEIGWDSPWGQGRPGWHIECSVMSNKYLGESIDIHSGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + +YWMHNG++ +NEKMSKSLGNFFT+R + + + LR F++SAHYRSP+
Sbjct: 241 EARSSHTFANYWMHNGYINVDNEKMSKSLGNFFTVRDVLKEFDGDTLRFFMLSAHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAEDC--INKLRDEFHA 375
NYS L+ A ++ + +++C+ L+ + KT E+ + + + F
Sbjct: 301 NYSKDMLNQAKSSL----ERIKNCKNNLNFILTKIDKTDMSEQEKENVAYLQECKTNFID 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 426
+M+DDLNT+ +T F D +KF N+++++ K QQ L ++ L + N
Sbjct: 357 KMNDDLNTADAITAIF-DLVKFANTNVSIDSSKVFVQQTLDMLNELTAVLN 406
>gi|410464212|ref|ZP_11317669.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus str. Maddingley
MBC34]
gi|409982672|gb|EKO39104.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus str. Maddingley
MBC34]
Length = 485
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/442 (45%), Positives = 268/442 (60%), Gaps = 11/442 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN+MT+ KE F V GKV MYVCG+TAYDL H+GHAR++V FD+L RYL H+ +V
Sbjct: 1 MQLYNTMTRTKEPFVSRVPGKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHIGFDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII++AN G ++ RY + DM L L P +P+ ++++ ++
Sbjct: 61 TFVRNFTDVDDKIIKKANAEGTTSQEIAERYIATFYEDMDKLGILRPNAEPKATEYIGEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I++ AY GDV+F V YG+LSG+ +E+ R+G RVA K +P DF
Sbjct: 121 ASLAQRLIDSGHAYRTPSGDVYFRVRSFAGYGKLSGRDVEDMRSGARVAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKA+K GEP W+SP+GPGRPGWH+ECSAMS L DIHGGG DLIFPHHENEIAQ
Sbjct: 181 ALWKASKPGEPVWESPFGPGRPGWHLECSAMSEKLLGMPIDIHGGGQDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA YW+HNG V N EKMSKSLGNF TIR I RY P LR FL+S+ YRSP
Sbjct: 241 SEAAIGGEFCRYWVHNGFVRINTEKMSKSLGNFITIRDIYARYLPEVLRFFLLSSQYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS LD A + IY E AL+ + ++ + +++ + F A M
Sbjct: 301 LDYSDQGLDEAEKGIKRIYTAKVQMEQALA--RAKWSETKLPADVTEELSRHEEGFTAAM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV---KEVLRI 434
DDLNT+ + F L + L M K K ++ + E LR+I EV+ +
Sbjct: 359 DDDLNTAQAMGHVF--GLVRLAGRL-MEDKTLVKSRETA--EVLRRILANFAVWAEVIGV 413
Query: 435 LGLLPPGAYSEVKTAFLVLLHV 456
G +E+K L L +
Sbjct: 414 FGTDAAAFLAELKACRLTRLGI 435
>gi|303251228|ref|ZP_07337406.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|307252540|ref|ZP_07534436.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|302649770|gb|EFL79948.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306860132|gb|EFM92149.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
Length = 459
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/422 (47%), Positives = 257/422 (60%), Gaps = 31/422 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D DL + P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNIIRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ LD A A+ +Y +L+ C++++ E + + F A M
Sbjct: 302 LNYSLDNLDLARSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ I +N LK + K L++ +KE+ +LG
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTEDMAKANGLAV---------RLKELAGVLG 392
Query: 437 LL 438
LL
Sbjct: 393 LL 394
>gi|363890596|ref|ZP_09317922.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium CM5]
gi|361964885|gb|EHL17890.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium CM5]
Length = 466
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/411 (44%), Positives = 264/411 (64%), Gaps = 8/411 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN+M+ QKE F + +GKV MY CG T Y+ H+G+AR + FD L YLE++ EV
Sbjct: 1 MKIYNTMSSQKEEFKELEKGKVKMYSCGPTVYNYFHIGNARPFIVFDTLRNYLEYIGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTDVDDKII +AN+ G P+ L+++Y +EY D + T PRV++++++I
Sbjct: 61 TFVQNFTDVDDKIIIKANEEGITPIQLADKYIEEYFKDAKAIGIRKATVHPRVTENIKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D I +I+ AYV+ DV+F V+K YG+LS + +++ +G R+ ++ KR P DFA
Sbjct: 121 IDFIQDLIDKGFAYVLGNDVYFEVKKFKEYGKLSHKNIDDLLSGARIEINDEKRAPIDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GE WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKGKKEGEIGWDSPWGQGRPGWHIECSVMSNKYLGESIDIHSGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + +YWMHNG++ +NEKMSKSLGNFFT+R + + + LR F++SAHYRSP+
Sbjct: 241 EARSSHTFANYWMHNGYINVDNEKMSKSLGNFFTVRDVLKEFDGDTLRFFMLSAHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAEDC--INKLRDEFHA 375
NYS L+ A ++ + +++C+ L+ + KT E+ + + + F
Sbjct: 301 NYSKDMLNQAKSSL----ERIKNCKNNLNFILTKIDKTDMSEQEKENVAYLQECKTNFID 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 426
+M+DDLNT+ +T F D +KF N+++++ K QQ L ++ L + N
Sbjct: 357 KMNDDLNTADAITAIF-DLVKFANTNVSIDSSKVFVQQTLDMLNELTGVLN 406
>gi|307250157|ref|ZP_07532117.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306857822|gb|EFM89918.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
Length = 459
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/422 (47%), Positives = 257/422 (60%), Gaps = 31/422 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D DL + P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNIIRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ LD A A+ +Y +L+ C++++ E + + F A M
Sbjct: 302 LNYSLDNLDLARSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ I +N LK + K L++ +KE+ +LG
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTEGMAKANGLAV---------RLKELAGVLG 392
Query: 437 LL 438
LL
Sbjct: 393 LL 394
>gi|312135922|ref|YP_004003260.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
gi|311775973|gb|ADQ05460.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
Length = 465
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/420 (44%), Positives = 258/420 (61%), Gaps = 15/420 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T KE F P+ +GKV MYVCG T YD H+G+AR + FD L RY E+ EV
Sbjct: 1 MKLYNTLTMTKEEFEPLEQGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y++NFTD++DK+I RAN G L+ R+ +EY D L T PR ++ + +
Sbjct: 61 IYIQNFTDIEDKMINRANKEGITVFELAERFIKEYYKDADRLNVKRATKNPRATEEIPDM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++I+ AYVV+GDV+F K YG+LS + +E AG RV + +K +P DFA
Sbjct: 121 ITLIQKLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDLSEKKEDPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+W SPWG GRPGWH+ECS M+ YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAKKEGEPAWLSPWGEGRPGWHVECSVMAMKYLGETIDIHAGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PL
Sbjct: 241 EAATGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S+ ++ A A+ IY+ ++ E + E G + N + + + + +F M
Sbjct: 301 NFSLDLIEQAESALKRIYKCYENLEYLIR--NETGSNSS-NSTLKASLEQFKIKFIDAME 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDLNT+ TG + ++ IN+ N K + L + +KE+ ILG+L
Sbjct: 358 DDLNTAEA-TGYLFEMVREINTHANTCSK-----------DVLILARDTLKELCGILGIL 405
>gi|417951842|ref|ZP_12594927.1| cysteinyl-tRNA synthetase [Vibrio splendidus ATCC 33789]
gi|342803794|gb|EGU39143.1| cysteinyl-tRNA synthetase [Vibrio splendidus ATCC 33789]
Length = 461
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/377 (49%), Positives = 245/377 (64%), Gaps = 16/377 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV GDV F V+K YG+LS Q LE +AG RV V+S KR+P DF
Sbjct: 122 IELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLEQLQAGARVDVESAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ + + F M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLTAAP-----------AGGEEYVTR----FSTAM 346
Query: 378 SDDLNTSHILTGAFQDA 394
+DD NT + F+ A
Sbjct: 347 NDDFNTPEAYSVLFEMA 363
>gi|148980442|ref|ZP_01816064.1| cysteinyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
gi|145961245|gb|EDK26558.1| cysteinyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
Length = 461
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/421 (46%), Positives = 262/421 (62%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV GDV F V+K YG+LS Q L+ +AG RV VDS KR+P DF
Sbjct: 122 IELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDSAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
+WK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VVWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGTDYVNTWMHSGMVMVDREKMSKSLGNFFTIRDLLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ + + F M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLTAAP-----------AGGEEYVTR----FSTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F+ A +N +K + IE + ++E+ I+G+
Sbjct: 347 NDDFNTPEAYSVLFEMA-----REINRIKTES--------IEKASGLGALMRELADIIGI 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|307245827|ref|ZP_07527913.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307254800|ref|ZP_07536627.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307259241|ref|ZP_07540971.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306853529|gb|EFM85748.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306862326|gb|EFM94293.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306866908|gb|EFM98766.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
Length = 459
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/422 (47%), Positives = 257/422 (60%), Gaps = 31/422 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D DL + P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNIIRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ LD A A+ +Y +L+ C++++ E + + F A M
Sbjct: 302 LNYSLNNLDLARSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ I +N LK + K L++ +KE+ +LG
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTEDMAKANGLAV---------RLKELAGVLG 392
Query: 437 LL 438
LL
Sbjct: 393 LL 394
>gi|410645940|ref|ZP_11356395.1| cysteinyl-tRNA synthetase [Glaciecola agarilytica NO2]
gi|410134539|dbj|GAC04794.1| cysteinyl-tRNA synthetase [Glaciecola agarilytica NO2]
Length = 464
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/422 (47%), Positives = 256/422 (60%), Gaps = 22/422 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T+QKELFTP+ KVG+YVCG+T YDLSH+GHAR +SFDL+ RYL H EV
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRYLRHKGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE +L+ R D A + L P +PRV+ HM +I
Sbjct: 62 NYVRNITDIDDKIIQRANENGETTRALTERTIAMMHDDFAAINLLEPDIEPRVTTHMPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++I AY + GDV F V +YG+LS Q LE G RV VDS K +P DF
Sbjct: 122 IAIIERLIQRGHAYQAKSGDVLFDVSSYSDYGKLSKQDLEQLNIGSRVDVDSGKDDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK K GEPSW SPWG GRPGWHIECSAM+ +L FDIHGGG DLIFPHHENE+AQ
Sbjct: 182 VLWKTVKPGEPSWSSPWGEGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G V ++EKMSKSLGNFFT+R + +++ LR+FL+SAHYRS
Sbjct: 242 SCCAYDTPYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVLKQHDAETLRYFLMSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS + A A+ +Y L+D + +++ ++D + + F M
Sbjct: 302 LSYSEDNITQARSALERLYTALRDVNANI----------QVDMQSDDYLAR----FDKAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D K +N K K Q S L I + +VL IL
Sbjct: 348 DDDFNTPEAMAVLF-DVAKELN------KAKAEDQSGQSRASDLAGILLNLGKVLGILQR 400
Query: 438 LP 439
P
Sbjct: 401 SP 402
>gi|429759537|ref|ZP_19292035.1| cysteine--tRNA ligase [Veillonella atypica KON]
gi|429179498|gb|EKY20745.1| cysteine--tRNA ligase [Veillonella atypica KON]
Length = 488
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/425 (47%), Positives = 274/425 (64%), Gaps = 20/425 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+MT+QKE+FTP+ G+ MYVCGVT Y+ H+G+AR V++D++ RY++H+ +V
Sbjct: 10 ITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYKV 69
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G ++NRY Y M L PRVS H+ I
Sbjct: 70 TYVQNFTDVDDKIINTSNGEGVAWDVIANRYIDSYFEVMDALGVERADVYPRVSTHIPDI 129
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI +I+ AY ++GDV+F+VEK +YG LSG+ L++ AG R+ VD RK+NP DFA
Sbjct: 130 LKMIETLIDKGYAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVDGRKKNPMDFA 189
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL +FD HGGG DLIFPHHENEIAQS
Sbjct: 190 LWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIFPHHENEIAQS 249
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C+ S V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRS
Sbjct: 250 EGCSGHHPS-VKYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRS 308
Query: 317 PLNYSVLQLDSASDAVFYIYQT------LQDCEVALSPFQEHGKTARINPAAEDCINKLR 370
PL++S +L+ A+ ++ + L+ CE P + R+ A++
Sbjct: 309 PLDFSDERLEEANKSLERLGTAIENLLYLEKCEAG--PCDD---AQRLLEKAKE----YE 359
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKE 430
+EF A MSDD NT+ + F A K IN ++ ++ Q ++ E +++I + E
Sbjct: 360 EEFEAAMSDDFNTALATSSMFGLA-KEINIYYQVVTGREGVVCQDAIAE-VKRIFKFMTE 417
Query: 431 VLRIL 435
V+ +L
Sbjct: 418 VIGVL 422
>gi|74317920|ref|YP_315660.1| cysteinyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
gi|109894959|sp|Q3SHN1.1|SYC_THIDA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|74057415|gb|AAZ97855.1| Cysteinyl-tRNA synthetase, class Ia [Thiobacillus denitrificans
ATCC 25259]
Length = 454
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/375 (50%), Positives = 238/375 (63%), Gaps = 16/375 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L I NS+T+ KE F P+ G+V MYVCG+T YDL HLGHAR V FD++ R+L V
Sbjct: 2 LHITNSLTRTKEEFVPLSPGRVRMYVCGMTVYDLCHLGHARVFVVFDMVTRWLRASGYAV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA++ E P +L+ R+ E D L LPP ++PR + ++ Q+
Sbjct: 62 EYVRNITDIDDKIIKRAHENKETPAALTERFIAEMHEDERALGVLPPDHEPRATAYVAQM 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I Q+++ AY DV+++V P YGRLSG+ L+ RAGERV VD KR+P DF
Sbjct: 122 LALIAQLVDRGLAYAAPNADVYYSVRGFPAYGRLSGKSLDELRAGERVEVDPNKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP+W+SPWG GRPGWHIECSAMSA L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWESPWGQGRPGWHIECSAMSAELLGQHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YW+HNG V +NEKMSKSLGNFFTIR++ ++Y +R F++ AHYRSP
Sbjct: 242 SEGAHGCTFVNYWLHNGFVRVDNEKMSKSLGNFFTIREVLQKYDAEIVRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A A+ +Y L+ A G PAA F M
Sbjct: 302 LNYSDAHLDDARGALTRLYTALKGAPAA-------GPVDWDAPAAA--------RFRGAM 346
Query: 378 SDDLNTSHILTGAFQ 392
DD NT + F+
Sbjct: 347 DDDFNTPEAIAVLFE 361
>gi|402838090|ref|ZP_10886604.1| cysteine--tRNA ligase [Eubacteriaceae bacterium OBRC8]
gi|402273799|gb|EJU22990.1| cysteine--tRNA ligase [Eubacteriaceae bacterium OBRC8]
Length = 466
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/411 (44%), Positives = 264/411 (64%), Gaps = 8/411 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN+M+ QKE F + +GKV MY CG T Y+ H+G+AR + FD L YLE++ EV
Sbjct: 1 MKIYNTMSSQKEEFKELEKGKVKMYSCGPTVYNYFHIGNARPFIVFDTLRNYLEYIGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTDVDDKII +AN+ G P+ L+++Y +EY D + T PRV++++++I
Sbjct: 61 TFVQNFTDVDDKIIIKANEEGITPIQLADKYIEEYFKDAKAIGIRKATVHPRVTENIKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D I +I+ AYV+ DV+F V+K YG+LS + +++ +G R+ ++ KR P DFA
Sbjct: 121 IDFIQDLIDKGFAYVLGNDVYFEVKKFKEYGKLSHKNIDDLLSGARIEINDEKRAPIDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GE WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKGKKEGEIGWDSPWGQGRPGWHIECSVMSNKYLGESIDIHSGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + +YWMHNG++ +NEKMSKSLGNFFT+R + + + LR F++SAHYRSP+
Sbjct: 241 EARSSHTFANYWMHNGYINVDNEKMSKSLGNFFTVRDVLKEFDGDTLRFFMLSAHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAEDC--INKLRDEFHA 375
NYS L+ A ++ + +++C+ L+ + KT E+ + + + F
Sbjct: 301 NYSKDMLNQAKSSL----ERIKNCKNNLNFILTKIDKTDMSEQEKENVAYLQECKTNFID 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 426
+M+DDLNT+ +T F D +KF N+++++ K QQ L ++ L + N
Sbjct: 357 KMNDDLNTADAITAIF-DLVKFANTNVSIDSSKVFVQQTLDMLNELTGVLN 406
>gi|407071860|ref|ZP_11102698.1| cysteinyl-tRNA ligase [Vibrio cyclitrophicus ZF14]
Length = 461
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/421 (46%), Positives = 261/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 NFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV GDV F V+K YG+LS Q L+ +AG RV VDS KR+P DF
Sbjct: 122 IELVEKLIQRGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDSAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ + + F M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLTAAP-----------AGGEEYVTR----FSTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F+ A +N +K + IE + ++E+ I+G+
Sbjct: 347 NDDFNTPEAYSVLFEMA-----RDINRIKTES--------IEKASALGALMRELADIIGI 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|342218372|ref|ZP_08710986.1| cysteine--tRNA ligase [Megasphaera sp. UPII 135-E]
gi|341589784|gb|EGS33046.1| cysteine--tRNA ligase [Megasphaera sp. UPII 135-E]
Length = 481
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/426 (46%), Positives = 275/426 (64%), Gaps = 18/426 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T++KELF P G V +YVCG+T Y+ SH+G+AR V++D++ RYL+HL EV
Sbjct: 4 LFVYNTLTRKKELFKPQTPGHVNIYVCGITPYNHSHMGNARPFVTWDVIKRYLKHLGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTDVDDKII AN G + +++NRY Y M L PRVS+HM+ I
Sbjct: 64 THVQNFTDVDDKIINAANGEGVSWDTIANRYIASYFEVMDALHVHRADIYPRVSEHMDAI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI +IN + AYV++ DV+++VEK YG+LSG+ L++ AG R+ V+ +K++P DFA
Sbjct: 124 FTMIQTLINKNIAYVLDNDVYYSVEKFDGYGKLSGRCLDDMMAGARIEVNDKKKHPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP+WDSPWG GRPGWHIECSAMS YL + FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKGAKPGEPAWDSPWGKGRPGWHIECSAMSHQYLGNSFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 CAAC--QDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
AC + V YW+HNG +T N+EKMSKSL NFF ++ + Y P A+R FLIS HYRS
Sbjct: 244 -EACFGHEPMVRYWLHNGFITINSEKMSKSLHNFFLVKDVLAYYKPDAVRFFLISNHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL++S +L + ++ + ++ + +AL K+A + +D ++ ++F
Sbjct: 303 PLDFSDARLKEMTRSLDRVRTSIVNV-LALLNMPTGSKSAEADNLLQDA-KQIMEDFETA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR--- 433
M DD NT+ G F+ A K +N+ Q QQ ++S + EVK + R
Sbjct: 361 MCDDFNTALASAGIFELAKK-----VNIY--HQAVAQQKVAVDS--SVVTEVKRIFRTMT 411
Query: 434 -ILGLL 438
ILG+L
Sbjct: 412 DILGIL 417
>gi|424807047|ref|ZP_18232455.1| cysteinyl-tRNA synthetase [Vibrio mimicus SX-4]
gi|342324989|gb|EGU20769.1| cysteinyl-tRNA synthetase [Vibrio mimicus SX-4]
Length = 459
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/435 (47%), Positives = 267/435 (61%), Gaps = 37/435 (8%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVGPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V K YG+LS Q LE +AG RV V++ KR+P DF
Sbjct: 122 IALVQRLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLEQLQAGARVDVEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ +++ F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEEYLSR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + L+ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDLTNASALGSLMRELADVIGIL 394
Query: 436 GLLPPGAYSEVKTAF 450
Y E +T F
Sbjct: 395 -------YQEPETFF 402
>gi|332306241|ref|YP_004434092.1| cysteinyl-tRNA synthetase [Glaciecola sp. 4H-3-7+YE-5]
gi|332173570|gb|AEE22824.1| cysteinyl-tRNA synthetase [Glaciecola sp. 4H-3-7+YE-5]
Length = 464
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/423 (47%), Positives = 254/423 (60%), Gaps = 24/423 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T+QKELFTP+ KVG+YVCG+T YDLSH+GHAR +SFDL+ RYL H EV
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRYLRHKGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE +L+ R D A + L P +PRV+ HM +I
Sbjct: 62 NYVRNITDIDDKIIQRANENGETTRALTERTIAMMHDDFAAINLLEPDIEPRVTTHMPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++I AY + GDV F V +YG+LS Q LE G RV VDS K +P DF
Sbjct: 122 IAIIERLIQRGHAYQAKSGDVLFDVSSYSDYGKLSKQDLEQLNMGSRVDVDSDKDDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK K GEPSW SPWG GRPGWHIECSAM+ +L FDIHGGG DLIFPHHENE+AQ
Sbjct: 182 VLWKTVKPGEPSWSSPWGEGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G V ++EKMSKSLGNFFT+R + +++ LR+FL+SAHYRS
Sbjct: 242 SCCAYDTPYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVLKQHDAETLRYFLMSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK-TARINPAAEDCINKLRDEFHAR 376
L+YS + A A+ +Y L+D + + G AR + A
Sbjct: 302 LSYSEDNITQARSALERLYTALRDVNANIQVDMQSGDYLARFDKA--------------- 346
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT + F D K +N K K +Q S L I + +VL IL
Sbjct: 347 MDDDFNTPEAMAVLF-DVAKELN------KAKAEEQSGHSRASDLAGILLNLGKVLGILQ 399
Query: 437 LLP 439
P
Sbjct: 400 RSP 402
>gi|336323676|ref|YP_004603643.1| cysteinyl-tRNA synthetase [Flexistipes sinusarabici DSM 4947]
gi|336107257|gb|AEI15075.1| cysteinyl-tRNA synthetase [Flexistipes sinusarabici DSM 4947]
Length = 477
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/421 (44%), Positives = 264/421 (62%), Gaps = 23/421 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ KE+F PI V MYVCGVT YD H+GHAR+AV FD RY+++ +V
Sbjct: 2 LKIYNTLNACKEIFEPINDNNVNMYVCGVTVYDKCHVGHARSAVVFDTARRYMKYRGYKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTD+DDKII ++ + G + ++ +Y +E+ DM L P Y+P+ +D+++ +
Sbjct: 62 TFVKNFTDIDDKIINKSKETGISWKEITEKYIREHDYDMNKLNVKKPDYEPKATDYIDDM 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ +++I AY ++GDV+F V+ YG+LS + +E +AG R+ + K +P DFA
Sbjct: 122 IELCSKLIEKGNAYEIDGDVYFRVKSFQEYGKLSNRDIEELKAGTRIELRDNKEDPLDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK +K GEP W+SPWG GRPGWHIECS MS+ L FDIHGGG DLIFPHHENEIAQS
Sbjct: 182 LWKKSKEGEPGWESPWGKGRPGWHIECSVMSSKILGLPFDIHGGGKDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A+C YWMHNG V N EKMSKSLGNFFTIR I E + P +LR+FL++ HYRSPL
Sbjct: 242 EASCGCQFAKYWMHNGFVNINKEKMSKSLGNFFTIRDIIEEFEPESLRYFLLTTHYRSPL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA--- 375
++S +L A A+ IY TL D V K R D +N +++ F
Sbjct: 302 DFSEDKLIEAESALDRIY-TLIDSMVTY-------KAGRKGKNLLDEVNSIKEHFEKDFI 353
Query: 376 -RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT+ L+ F+ K +N+L + +P + ES + ++N+ ++L I
Sbjct: 354 EAMDDDFNTAAALSVIFEYIRK-----MNVLLENKPDK------ESFKSLKNQFNDILEI 402
Query: 435 L 435
+
Sbjct: 403 V 403
>gi|108764055|ref|YP_630849.1| cysteinyl-tRNA synthetase [Myxococcus xanthus DK 1622]
gi|108467935|gb|ABF93120.1| cysteinyl-tRNA synthetase [Myxococcus xanthus DK 1622]
Length = 504
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/420 (45%), Positives = 255/420 (60%), Gaps = 11/420 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++++N+MT QKEL P + G+VG+YVCG T Y H+G+AR SFD++ RYL H +V
Sbjct: 21 IRLFNTMTMQKELLQPAIPGEVGVYVCGPTVYSYIHIGNARTFTSFDVVVRYLRHRGLKV 80
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTDVDDKII+ A + GE P+ L+ RY + + D L L P + PRVSDH+ +I
Sbjct: 81 RYVRNFTDVDDKIIKAAAETGEAPVELAARYVEIFREDTRALHLLEPDFSPRVSDHLPEI 140
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++++ AY +GDV+F+V +Y +LS + L+ GERV +KR P DFA
Sbjct: 141 IAIIQKLVDKGHAYASQGDVYFSVSSDEDYAKLSKRNLDELCVGERVQPGEQKREPLDFA 200
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP+W+SPWGPGRPGWHIECSAMSA YL FDIHGG +DLIFPHHENEIAQS
Sbjct: 201 LWKAAKPGEPAWESPWGPGRPGWHIECSAMSAKYLGETFDIHGGALDLIFPHHENEIAQS 260
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+A + YWMH G + KMSKSLGN +R + P ALR F ++ HYR PL
Sbjct: 261 ESANGVTFARYWMHCGFLDLEGAKMSKSLGNVVRLRDALTKVDPEALRFFFLATHYRHPL 320
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++S L A + Y Y+TL+ + +S GK P D + EF + M
Sbjct: 321 SFSDKALADAETRMEYFYETLRKVDERIS-----GKDFGKGPLHGDP-QRFFTEFESAMD 374
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ L +L + +N L K P + + + +L + +V+ V +LGL
Sbjct: 375 DDFNTAGGL-----GSLSGLFGMMNELTDKPPVKDKALVGRTLHALREDVRRVSSVLGLF 429
>gi|341926027|dbj|BAK53927.1| cysteinyl-tRNA synthetase [Chitiniphilus shinanonensis]
Length = 459
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/424 (46%), Positives = 259/424 (61%), Gaps = 37/424 (8%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN+++++KE+F PIV GKV MYVCG+T YD HLGHAR V FD++ R+L V
Sbjct: 2 LNLYNTLSREKEVFRPIVPGKVNMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGYAV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE+ +L+ R+ D L L P ++PR ++ + +
Sbjct: 62 DYVRNITDIDDKIIKRALENGESINALTQRFIDAMNEDADALGVLRPDHEPRATEFVGAM 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I+N AY GDV++AV K YG+LSG+ L++ RAGERV VD K++P DF
Sbjct: 122 HQMIGRLIDNGLAYSAPNGDVYYAVRKFDGYGKLSGKSLDDLRAGERVDVDPNKQDPLDF 181
Query: 198 ALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWKAAKA EP+ WDSPWG GRPGWHIECSAMS H+L + FDIHGGG DL FPHHENE
Sbjct: 182 VLWKAAKADEPADAKWDSPWGAGRPGWHIECSAMSCHHLGAHFDIHGGGADLQFPHHENE 241
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A V+YWMHNG + +NEKMSKSLGNFFTIR++ ++Y +R F++ AHY
Sbjct: 242 IAQSEGASGQRYVNYWMHNGFIRVDNEKMSKSLGNFFTIREVLKKYDAEVVRFFILRAHY 301
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
RSPLNYS + LD A +A+ +Y L K + D + F
Sbjct: 302 RSPLNYSDMHLDDARNALTRLYTAL--------------KAVPADAVTLDWQSPYAARFK 347
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
A M DD NT+ + F L + +QQ +L E+K + +
Sbjct: 348 AAMDDDFNTTEAVAVLFD------------LAHEANRQQSPALA-------GELKALAGV 388
Query: 435 LGLL 438
LGLL
Sbjct: 389 LGLL 392
>gi|163751990|ref|ZP_02159201.1| cysteinyl-tRNA synthetase [Shewanella benthica KT99]
gi|161328148|gb|EDP99315.1| cysteinyl-tRNA synthetase [Shewanella benthica KT99]
Length = 459
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/382 (49%), Positives = 244/382 (63%), Gaps = 17/382 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YNS+T+QKE F P+ GK+GMYVCG+T YDL H+GH R VSFD++ RYL + EV
Sbjct: 2 LKLYNSLTRQKEEFKPLQPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RA + E+ SL+ R E D L P ++PR + HM +I
Sbjct: 62 NFQRNITDVDDKIIKRAAENNESCKSLTERLIGEMHRDFDALNMKRPDFEPRATQHMPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++I + AYV + GDV F+V YGRLSGQ +E +AG RV V+ KR+P DF
Sbjct: 122 IDMVEKLIEKEYAYVSDNGDVLFSVSSFAEYGRLSGQNIEQLQAGARVEVEDTKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWG GRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSL NFFTIR + + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVLKHYDAGTIRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y +L+ ++ + P A+E + +F A M
Sbjct: 302 LNYSEDNLKQAKSALDRLYTSLKGLDLNVEPAD----------ASEFVV-----KFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFIN 399
DD NT + F D ++ IN
Sbjct: 347 DDDFNTPEAYSVLF-DMVREIN 367
>gi|37679546|ref|NP_934155.1| cysteinyl-tRNA synthetase [Vibrio vulnificus YJ016]
gi|37198290|dbj|BAC94126.1| cysteinyl-tRNA synthetase [Vibrio vulnificus YJ016]
Length = 509
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/423 (45%), Positives = 266/423 (62%), Gaps = 26/423 (6%)
Query: 14 KMDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEH 73
++++ LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +
Sbjct: 46 QIEIMLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRY 105
Query: 74 LKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSD 133
L ++T+VRN TD+DDKII+RA + GE SL+ R E D L P +PR +
Sbjct: 106 LGYDLTFVRNITDIDDKIIKRAAENGETCDSLTERLIGEMHADFDALNMKRPDVEPRATQ 165
Query: 134 HMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKR 192
++++I +++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV V++ KR
Sbjct: 166 YIQEIIELVERLIERGFAYVADNGDVMFEVNKFDEYGKLSKQDLDQLQAGARVDVETAKR 225
Query: 193 NPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHE 252
P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHE
Sbjct: 226 CPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHE 285
Query: 253 NEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 312
NEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S
Sbjct: 286 NEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSG 345
Query: 313 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 372
HYRS LNYS L+ A ++ +Y +L+ + + +P E+ +++
Sbjct: 346 HYRSQLNYSEENLNQARASLERLYTSLRGLDFSAAP-----------AGGEEYVSR---- 390
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F A M+DD NT + F D + IN + K + L+ +L + E+ +V+
Sbjct: 391 FTAAMNDDFNTPEAYSVLF-DMAREIN---------RLKTEDLANASALGALMRELADVI 440
Query: 433 RIL 435
IL
Sbjct: 441 GIL 443
>gi|383191176|ref|YP_005201304.1| cysteinyl-tRNA synthetase [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371589434|gb|AEX53164.1| cysteinyl-tRNA synthetase [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 463
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/422 (46%), Positives = 259/422 (61%), Gaps = 30/422 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE ++L++R E D A L LPP +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRAAENGETFMALTDRMIGEMHADFAALNILPPDSEPRATQHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR-KRNPAD 196
D++ +I+ D AYV GDV F VE P+YG LS Q L+ +AG RV V++ KRNP D
Sbjct: 122 IDIVQTLIDRDHAYVASNGDVMFWVESDPDYGLLSRQDLDQLQAGARVEVEANVKRNPMD 181
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIA
Sbjct: 182 FVLWKMSKPGEPSWTSPWGKGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIA 241
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V+ WMH+G V + EKMSKSL NFFT+R + + Y ++R+FL+S HYRS
Sbjct: 242 QSSCAHDGPYVNTWMHSGMVMIDREKMSKSLDNFFTVRDVLKYYDAESVRYFLMSGHYRS 301
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
LNYS L A ++ +Y L+ + A +P R F A
Sbjct: 302 QLNYSEENLKLARTSMERLYTALRGTDAAATPAGGEAFVTR---------------FRAA 346
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT + F D + IN + K + LS L E++++ +LG
Sbjct: 347 MDDDFNTPEAYSVLF-DMARDIN---------RLKTEDLSAANGLAA---ELRQLAGVLG 393
Query: 437 LL 438
LL
Sbjct: 394 LL 395
>gi|303228928|ref|ZP_07315738.1| cysteine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
gi|302516342|gb|EFL58274.1| cysteine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
Length = 482
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/425 (47%), Positives = 274/425 (64%), Gaps = 20/425 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+MT+QKE+FTP+ G+ MYVCGVT Y+ H+G+AR V++D++ RY++H+ +V
Sbjct: 4 ITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G ++NRY Y M L PRVS H+ I
Sbjct: 64 TYVQNFTDVDDKIINTSNGEGVAWDVIANRYIDSYFEVMDALGVERADVYPRVSTHIPDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI +I+ AY ++GDV+F+VEK +YG LSG+ L++ AG R+ VD RK+NP DFA
Sbjct: 124 LKMIETLIDKGYAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVDGRKKNPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL +FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C+ S V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRS
Sbjct: 244 EGCSGHHPS-VKYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQT------LQDCEVALSPFQEHGKTARINPAAEDCINKLR 370
PL++S +L+ A+ ++ + L+ CE P + R+ A++
Sbjct: 303 PLDFSDERLEEANKSLERLGTAIENLLYLEKCEAG--PCDD---AQRLLEKAKE----YE 353
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKE 430
+EF A MSDD NT+ + F A K IN ++ ++ Q ++ E +++I + E
Sbjct: 354 EEFEAAMSDDFNTALATSSMFGLA-KEINIYYQVVTGREGVVCQDAIAE-VKRIFKFMTE 411
Query: 431 VLRIL 435
V+ +L
Sbjct: 412 VIGVL 416
>gi|262376233|ref|ZP_06069463.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
gi|262308834|gb|EEY89967.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
Length = 473
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/421 (45%), Positives = 261/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P V G++ +YVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRVEGQIDLYVCGMTVYDYCHIGHARTVVAFDYIIRFLRSQGWKVKY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII+RAN+ GE+ L++R+ D A L CL P P+ +D+++Q++
Sbjct: 66 VRNITDIDDKIIKRANENGESISELTSRFIDAMNEDFAKLGCLAPDVAPKATDYIDQMQA 125
Query: 141 MITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI +++ AY GDV+F VEK YGRLSG++LE+ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVDKGTAYPSNNGDVYFEVEKFAKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGADLTFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHAGFINVDGEKMSKSLGNFFTIRDVIEKFHPEVVRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NYS + L A + + Y + + + + +H E L + F+A M
Sbjct: 306 VNYSDVALKEAKNTLSRFYHSFKTYQAV---YGDH--------LIETLDEALVERFNAAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F+ IN LN K++ +Q +LR + N ILGL
Sbjct: 355 RDDFNTPEAIAVLFE-----INKELNRTVKEENAEQAAIYYATLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|401679837|ref|ZP_10811761.1| cysteine--tRNA ligase [Veillonella sp. ACP1]
gi|400218964|gb|EJO49835.1| cysteine--tRNA ligase [Veillonella sp. ACP1]
Length = 482
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/428 (45%), Positives = 273/428 (63%), Gaps = 23/428 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+MT+QKE+FTP+ G+ MYVCGVT Y+ H+G+AR V++D++ RY++H+ +V
Sbjct: 4 ITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G ++NRY Y M L PRVS H+ I
Sbjct: 64 TYVQNFTDVDDKIINTSNGEGVAWDVIANRYIDSYFEVMDALGVERADVYPRVSTHIPDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI+ +I+ AY ++GDV+F+VEK +YG LSG+ L++ AG R+ VD RK+NP DFA
Sbjct: 124 LKMISTLIDKGFAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVDGRKKNPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL +FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C+ S V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRS
Sbjct: 244 EGCSGHHPS-VKYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQT------LQDCEVALSPFQEHGKTARINPAAEDCINKLR 370
PL++S +L+ A+ ++ + L+ CE P + R+ A++
Sbjct: 303 PLDFSDERLEEANKSLERLGTAIENLLYLEKCEAG--PCDD---AQRLLEKAKE----YE 353
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKE 430
+EF MSDD NT+ + F + +N+ + ++ + E++ +++ K
Sbjct: 354 EEFEVAMSDDFNTALATSSMFG-----LAKEINIYYQAVTGREGVVCQEAIAEVKRIFKF 408
Query: 431 VLRILGLL 438
+ ++G+L
Sbjct: 409 MTEVIGVL 416
>gi|91793850|ref|YP_563501.1| cysteinyl-tRNA synthetase [Shewanella denitrificans OS217]
gi|123356646|sp|Q12L98.1|SYC_SHEDO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91715852|gb|ABE55778.1| cysteinyl-tRNA synthetase [Shewanella denitrificans OS217]
Length = 459
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/382 (48%), Positives = 247/382 (64%), Gaps = 17/382 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNSM+++K+ F PI GK+GMYVCG+T YDL H+GH R VSFD++ RYL +L EV
Sbjct: 2 LKIYNSMSREKQEFKPITPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYLGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RA + E+ +L+ R E D L + P ++P+ + HM +I
Sbjct: 62 NFQRNITDVDDKIIKRAAENNESCDALTERLTAEMHKDFDALNMVRPDFEPKATLHMPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ ++++ AYV +GDV F+V YGRLSGQ ++ +AG RV +D K+NP DF
Sbjct: 122 IEMVQRLLDRGHAYVAPDGDVLFSVASYKEYGRLSGQNIDQLQAGARVEIDHNKQNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWG GRPGWHIECSAM+ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGAGRPGWHIECSAMNGKHLGTHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLKHYDAQTVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y +D ++ ++ A++ + K F + M
Sbjct: 302 LNYSEDNLKQARSALERLYTAFKDLDLTVTA-----------APADEYVTK----FKSAM 346
Query: 378 SDDLNTSHILTGAFQDALKFIN 399
+DD NT + F D ++ IN
Sbjct: 347 NDDFNTPEAYSVLF-DMVREIN 367
>gi|410635575|ref|ZP_11346184.1| cysteinyl-tRNA synthetase [Glaciecola lipolytica E3]
gi|410144873|dbj|GAC13389.1| cysteinyl-tRNA synthetase [Glaciecola lipolytica E3]
Length = 458
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/383 (49%), Positives = 240/383 (62%), Gaps = 16/383 (4%)
Query: 20 KIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVT 79
+IYN++T+QKE F P+V GKVG+YVCG+T YD+ H+GHAR +SFDL+ RYL H +V
Sbjct: 3 QIYNTLTRQKETFKPLVAGKVGLYVCGITVYDVCHMGHARTYLSFDLMVRYLRHKGFDVN 62
Query: 80 YVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIK 139
YVRN TDVDDKII+RAN GE L+ R D A + L P +PRV+ H+ +I
Sbjct: 63 YVRNITDVDDKIIQRANQNGETAEQLTQRTIALMHEDFAAINLLEPDIEPRVTTHIPEII 122
Query: 140 DMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I ++I+ AY GDV F V YG+LS Q LE AGERV V S K +P DF
Sbjct: 123 DVIQRLISKGHAYQAPSGDVLFDVSTYDQYGKLSKQDLEQLNAGERVEVSSDKTDPLDFV 182
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GEP W+SPWG GRPGWHIECSAM++ +L + FDIHGGG DLIFPHHENE+AQS
Sbjct: 183 LWKTVKPGEPYWESPWGEGRPGWHIECSAMNSKHLGTHFDIHGGGSDLIFPHHENEVAQS 242
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
C A V+YW+H G V + EKMSKSLGNFFT+R + + Y LR+FL+SAHYRS L
Sbjct: 243 CCAFDTPYVNYWIHTGMVQVDQEKMSKSLGNFFTLRDVLKDYDAETLRYFLMSAHYRSQL 302
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
+YS + A A+ +Y L+D + + G D + + F + M
Sbjct: 303 SYSEENIKQAKSALERLYTALRDSQPNFDVDMQQG----------DYLQR----FESAMD 348
Query: 379 DDLNTSHILTGAFQDALKFINSS 401
DD NT F D +K IN S
Sbjct: 349 DDFNTPEAFAVMF-DLVKDINKS 370
>gi|209695403|ref|YP_002263332.1| cysteinyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
gi|226710839|sp|B6EH43.1|SYC_ALISL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|208009355|emb|CAQ79625.1| cysteinyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
Length = 462
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/423 (46%), Positives = 263/423 (62%), Gaps = 31/423 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIYNSLTRQKEEFKPITEGKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRFLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E+ +L+ R E D L+ P +PR ++++ +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENNESCEALTERLIAEMHADFDALKMKRPDVEPRATEYITEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD--SRKRNPA 195
+++ ++I AYV GDV F V+K YGRLS Q LE +AG RV ++ S KR+
Sbjct: 122 VELVERLIERGFAYVASNGDVMFEVKKFDEYGRLSRQDLEQLQAGSRVTLEETSVKRSGM 181
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEI
Sbjct: 182 DFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLMFPHHENEI 241
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYR
Sbjct: 242 AQSCCAHDAKYVNTWMHSGMVMIDREKMSKSLGNFFTIRDVLAHYDSETVRYFLMSGHYR 301
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
S LNYS L+ A ++ +Y +L+ ++ ++P E + + F
Sbjct: 302 SQLNYSEENLNQARSSLERLYTSLRGLDLTVTP-----------AGGETFVTR----FST 346
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F+ A +N LK + IE+ K+ ++E+ +L
Sbjct: 347 AMNDDFNTPEAYSVLFEMA-----REVNRLKTEN--------IEAASKLGALMRELAEVL 393
Query: 436 GLL 438
GLL
Sbjct: 394 GLL 396
>gi|410641387|ref|ZP_11351907.1| cysteinyl-tRNA synthetase [Glaciecola chathamensis S18K6]
gi|410138920|dbj|GAC10094.1| cysteinyl-tRNA synthetase [Glaciecola chathamensis S18K6]
Length = 464
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/423 (47%), Positives = 253/423 (59%), Gaps = 24/423 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T+QKELFTP+ KVG+YVCG+T YDLSH+GHAR +SFDL+ RYL H EV
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLIVRYLRHKGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE +L+ R D A + L P +PRV+ HM +I
Sbjct: 62 NYVRNITDIDDKIIQRANENGETTRALTERTIAMMHDDFAAINLLEPDIEPRVTTHMPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++I AY + GDV F V +YG+LS Q LE G RV VDS K +P DF
Sbjct: 122 IAIIERLIQRGHAYQAKSGDVLFDVSSYSDYGKLSKQDLEQLNMGSRVDVDSDKDDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK K GEPSW SPWG GRPGWHIECSAM+ +L FDIHGGG DLIFPHHENE+AQ
Sbjct: 182 VLWKTVKPGEPSWSSPWGEGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G V ++EKMSKSLGNFFT+R + +++ LR+FL+SAHYRS
Sbjct: 242 SCCAYDTPYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVLKQHDAETLRYFLMSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK-TARINPAAEDCINKLRDEFHAR 376
L+YS + A A+ +Y L+D + + G AR + A
Sbjct: 302 LSYSEDNITQARSALERLYTALRDVNANIQVDMQSGDYLARFDKA--------------- 346
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT + F D K +N K K Q S L I + +VL IL
Sbjct: 347 MDDDFNTPEAMAVLF-DVAKELN------KAKAEDQSGQSRASDLAGILLNLGKVLGILQ 399
Query: 437 LLP 439
P
Sbjct: 400 RSP 402
>gi|322514668|ref|ZP_08067696.1| cysteine--tRNA ligase [Actinobacillus ureae ATCC 25976]
gi|322119366|gb|EFX91475.1| cysteine--tRNA ligase [Actinobacillus ureae ATCC 25976]
Length = 459
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/422 (47%), Positives = 257/422 (60%), Gaps = 31/422 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D DL L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV + DV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAADDDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS
Sbjct: 242 SCCAHSGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ LD A A+ +Y +L+ C++++ Q G + + F A M
Sbjct: 302 LNYSLDNLDLARSALERLYTSLRGCDLSV---QVAGSEQYV------------EAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ I +N LK + K L++ +KE+ +LG
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTEDMAKANGLAV---------RLKELAGVLG 392
Query: 437 LL 438
LL
Sbjct: 393 LL 394
>gi|303231487|ref|ZP_07318217.1| cysteine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
gi|302513830|gb|EFL55842.1| cysteine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
Length = 482
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/425 (47%), Positives = 274/425 (64%), Gaps = 20/425 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+MT+QKE+FTP+ G+ MYVCGVT Y+ H+G+AR V++D++ RY++H+ +V
Sbjct: 4 ITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G ++NRY Y M L PRVS H+ I
Sbjct: 64 TYVQNFTDVDDKIINTSNGEGVAWDVIANRYIDSYFEVMDALGVERADVYPRVSTHIPDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI +I+ AY ++GDV+F+VEK +YG LSG+ L++ AG R+ VD RK+NP DFA
Sbjct: 124 LKMIETLIDKGYAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVDGRKKNPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL +FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C+ S V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRS
Sbjct: 244 EGCSGHHPS-VKYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQT------LQDCEVALSPFQEHGKTARINPAAEDCINKLR 370
PL++S +L+ A+ ++ + L+ CE P + R+ A++
Sbjct: 303 PLDFSDERLEEANKSLERLGTAIENLLYLEKCEAG--PCDD---AQRLLEKAKE----YE 353
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKE 430
+EF A MSDD NT+ + F A K IN ++ ++ Q ++ E +++I + E
Sbjct: 354 EEFEAAMSDDFNTALATSSMFGLA-KEINIYYQVVTGREGVVCQDAIAE-VKRIFKFMTE 411
Query: 431 VLRIL 435
V+ +L
Sbjct: 412 VIGVL 416
>gi|34497201|ref|NP_901416.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
gi|34103057|gb|AAQ59420.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
Length = 459
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/385 (48%), Positives = 242/385 (62%), Gaps = 19/385 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN++T+QKE F PI GKV MYVCG+T YDL H+GHAR +FD++YR+L+
Sbjct: 2 IMLSLYNTLTRQKEAFKPIEPGKVSMYVCGMTVYDLCHIGHARMLAAFDVIYRWLKASGY 61
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YVRN TD++DKII+RA + G P L + D A L LPPT++PR + H+
Sbjct: 62 DVNYVRNITDIEDKIIKRALERGITPEQLVEETIADMRQDAAALGLLPPTHEPRATHHVG 121
Query: 137 QIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+ MI Q+I N AY GDV++AV + YG+LSG+ L+ RAGERV VD KR+P
Sbjct: 122 GMVAMIEQLIANGKAYPAANGDVYYAVREFEGYGKLSGRTLDKLRAGERVEVDPNKRDPL 181
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWKAAK GEPSWDSPWG GRPGWHIECS MS H+L FDIHGGG DL FPHHENEI
Sbjct: 182 DFVLWKAAKPGEPSWDSPWGKGRPGWHIECSVMSCHHLGEHFDIHGGGEDLQFPHHENEI 241
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A V+YW+HNG + + EKMSKSLGNFFTIR + + + +R F++ +HYR
Sbjct: 242 AQSEGAHGHQYVNYWLHNGFINVDGEKMSKSLGNFFTIRDVLQHFDGEVIRFFIVRSHYR 301
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE--HGKTARINPAAEDC-------- 365
SP+NY+ L+ A + +Y L+ E+ S + H AR A +D
Sbjct: 302 SPVNYTDSILNDAKHGLTRLYTALRGIELPTSDGIDWNHAYAARFKAAMDDDFGTSEAVA 361
Query: 366 --------INKLRDEFHARMSDDLN 382
+NK RD AR+ DL
Sbjct: 362 VLFELAGEVNKSRDPQLARLLKDLG 386
>gi|239906952|ref|YP_002953693.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
gi|259511829|sp|C4XSW5.1|SYC_DESMR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|239796818|dbj|BAH75807.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
Length = 485
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/374 (49%), Positives = 241/374 (64%), Gaps = 3/374 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN+MT+ KE F V GKV MYVCG+TAYDL H+GHAR++V FD+L RYL H+ +V
Sbjct: 1 MQLYNTMTRTKEPFVSRVPGKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHIGFDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII++AN G ++ RY + DM L L P +P+ ++++ ++
Sbjct: 61 TFVRNFTDVDDKIIKKANAEGTTSQEIAERYIATFYEDMDKLGILRPNAEPKATEYIGEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I++ AY GDV+F V YG+LSG+ +E+ R+G RVA K +P DF
Sbjct: 121 ASLAQRLIDSGHAYRTPSGDVYFRVRSFAGYGKLSGRDVEDMRSGARVAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKA+K GEP W+SP+GPGRPGWH+ECSAMS L DIHGGG DLIFPHHENEIAQ
Sbjct: 181 ALWKASKPGEPVWESPFGPGRPGWHLECSAMSEKLLGMPIDIHGGGQDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA YW+HNG V N EKMSKSLGNF TIR I RY P LR FL+S+ YRSP
Sbjct: 241 SEAAIGGEFCRYWVHNGFVRINTEKMSKSLGNFITIRDIYARYLPEVLRFFLLSSQYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS LD A + IY E AL + ++ + +++ + F A M
Sbjct: 301 LDYSDQGLDEAEKGIKRIYAAKVQMEQALG--RAKWSETKLPADVTEELSRHEEGFTAAM 358
Query: 378 SDDLNTSHILTGAF 391
DDLNT+ + F
Sbjct: 359 DDDLNTAQAMGHVF 372
>gi|329121962|ref|ZP_08250574.1| cysteine--tRNA ligase [Dialister micraerophilus DSM 19965]
gi|327467260|gb|EGF12763.1| cysteine--tRNA ligase [Dialister micraerophilus DSM 19965]
Length = 481
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/422 (44%), Positives = 264/422 (62%), Gaps = 12/422 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++ ++K++F PI GKV +YVCGVT Y+ H+G+AR AV++D++ RYLE++ V
Sbjct: 4 IKVYNTLKREKQIFKPIEEGKVKIYVCGVTPYNHPHIGNARPAVTWDIIRRYLEYIGYHV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTDVDDKII +AN + ++S RY Y M L P VS HME I
Sbjct: 64 DFIQNFTDVDDKIINKANAEKSDWKTVSTRYIDAYFKVMDALHIRRADIYPYVSKHMEDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
DM+ +I AYV+ DV++ + +Y +LSG+++E+ AG RV V++ KRNP DFA
Sbjct: 124 IDMVKTLIEKGHAYVLGNDVYYDISTFKDYCKLSGRKVEDMLAGARVMVNTAKRNPGDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP W+SPWG GRPGWHIECS MS HYL + FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKGAKPGEPFWESPWGNGRPGWHIECSVMSTHYLGATFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V YW+HNG +T N+EKMSKSL NFF ++ + E+Y ALR+FL+S HYRSPL
Sbjct: 244 EGATGQKFVKYWLHNGFITINSEKMSKSLNNFFLVKDVLEKYSGDALRYFLLSTHYRSPL 303
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHAR 376
++S +L+ A + L+D + ++ N + + + +EF
Sbjct: 304 DFSDERLEEAEKNM----SKLKDVIARIKEMEKEDGKVETNESVSLKKAAARTIEEFRQA 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M+DD NT + TG D +K IN N + +++ ++IE+ + K +L ILG
Sbjct: 360 MNDDFNTG-LATGVLFDFVKDINIYYNAVNSGVAIEKE-AVIEA----KETFKTILDILG 413
Query: 437 LL 438
+L
Sbjct: 414 IL 415
>gi|347731165|ref|ZP_08864267.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. A2]
gi|347520052|gb|EGY27195.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. A2]
Length = 485
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 257/421 (61%), Gaps = 8/421 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++T++KE F P V GKV MYVCG+TAYDL H+GHAR+AV FD+L RYL H +V
Sbjct: 1 MQLYNTLTRKKEHFEPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+ RNFTDVDDKII RAN G + ++ +Y + DM L L +PR + H+ ++
Sbjct: 61 TFARNFTDVDDKIITRANQEGLSSQEVAEKYIATFYEDMDRLNVLRADIEPRATTHIAEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I AY GDV+F V P YG+LSG+ +++ R+G RVA K +P DF
Sbjct: 121 ISLCERLIEQGKAYATPSGDVYFRVRAFPGYGKLSGRDVDDLRSGARVAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK AK GEP W+SPWG GRPGWHIECSAMS +L DIHGGG DL+FPHHENEIAQ
Sbjct: 181 ALWKGAKPGEPYWESPWGRGRPGWHIECSAMSEKHLPLPLDIHGGGQDLVFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AA V YW+HNG V N EKMSKSLGNF TIR I E Y P LR+FL++ HYRSP
Sbjct: 241 TEAALGKDFVRYWVHNGFVQVNAEKMSKSLGNFRTIRDILENYLPETLRYFLLTKHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++++ +D A + IY+ L L +E + + + LR F M
Sbjct: 301 IDFTFESMDEAEKNLKRIYEALGLLHAELQ--REKWTSGPLPKDVTEEFEGLRQAFADAM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD+NT+ L F ++ N L+ K Q K + E R++ +E + +LG+
Sbjct: 359 EDDMNTAAALGHVFT-MVRLANRILD--NKGQRKTEGAR--ELFRRVLDEARAWTAVLGV 413
Query: 438 L 438
Sbjct: 414 F 414
>gi|15606347|ref|NP_213726.1| cysteinyl-tRNA synthetase [Aquifex aeolicus VF5]
gi|6831683|sp|O67163.1|SYC_AQUAE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|2983551|gb|AAC07125.1| cysteinyl-tRNA synthetase [Aquifex aeolicus VF5]
Length = 495
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/400 (44%), Positives = 257/400 (64%), Gaps = 6/400 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L+IYN+++ + E F PI KV +Y CGVT YD SH+GH R+ + FD+ R+LEHL
Sbjct: 1 MSLRIYNTLSGKVEEFVPINPPKVLIYTCGVTVYDDSHVGHGRSLIVFDVFRRFLEHLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V +VRNFTDVDDKII RA + +++++RY Y VDM +++ P +PRV++H+
Sbjct: 61 QVKFVRNFTDVDDKIINRAKQECTDFMTIADRYIARYYVDMENIRVRPADVEPRVTEHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I ++I +++ AYVVEGDV+F+V+K +YG+LS + +E AG RV +KR+P D
Sbjct: 121 EIIEVIQKLVEKGYAYVVEGDVYFSVKKFKDYGKLSKRDIEELIAGARVEPSEKKRDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA+KAGEP+WDSPWG GRPGWH EC AM +L DIHGGG+DL+FPHHENEIA
Sbjct: 181 FALWKASKAGEPAWDSPWGKGRPGWHTECVAMVFKHLGETIDIHGGGLDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ A YWMHNG VT +KMSKSLGN+ T+R++ +YHP LR ++ HYRS
Sbjct: 241 QAEAITGKPFARYWMHNGLVTVGGQKMSKSLGNYVTLREVYTKYHPDVLRLLVLFTHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL++S +++ A + ++D E+ K +P E + + + F+A
Sbjct: 301 PLDFSWEKMEETLKAYERLKNAIEDLELLKKLQVVESKEGGTHPLYEQ-VKEFEENFYAS 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 416
+SDD NT L+ ++ + LN +K K + +++
Sbjct: 360 LSDDFNTPEALSHVYK-----LVGELNKVKNKAYSEGKIT 394
>gi|421076448|ref|ZP_15537435.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans JBW45]
gi|392525459|gb|EIW48598.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans JBW45]
Length = 481
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/379 (48%), Positives = 250/379 (65%), Gaps = 8/379 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LK+YN+MT+QKE F P GKV MYVCGVT Y+ H+G+AR +++D++ RYLEH +
Sbjct: 1 MALKVYNTMTRQKEEFIPHEAGKVKMYVCGVTPYNHPHIGNARPFITWDVIKRYLEHCRY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV +V+NFTDVDDKII+ AN+ G ++NRY Y M L P VSDHM
Sbjct: 61 EVFHVQNFTDVDDKIIKAANNEGVTWDVIANRYIASYFEVMDKLNIRRADIYPTVSDHMT 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I +++ ++ AY+V+GDVF++VEK +YG+LSG+ +E+ +AG RV VD RK +P D
Sbjct: 121 EIINIVEGLVAKGYAYIVDGDVFYSVEKFNDYGKLSGRDIEDMKAGARVDVDERKHHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+AK GEP+W+SPWG GRPGWHIEC+AMS YL + FD HGGG DLIFPHHENEIA
Sbjct: 181 FALWKSAKPGEPAWESPWGKGRPGWHIECTAMSLKYLGNSFDFHGGGSDLIFPHHENEIA 240
Query: 257 QSCAACQDSN--VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
QS A ++ V YW+HNG +T N EKMSKSLGNFF ++ I E Y P LR F++S HY
Sbjct: 241 QSEAFVEEGQPFVRYWLHNGFITVNEEKMSKSLGNFFLVKDILEHYSPEVLRFFVLSTHY 300
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDE 372
RSPL++S +L A ++ + L+ + ++ A N A E + ++
Sbjct: 301 RSPLDFSDERLSEAQRSL----ERLRTAVENVLQLEKLPDAANENKADELVKVAKQAEED 356
Query: 373 FHARMSDDLNTSHILTGAF 391
F M DD NT+ ++ F
Sbjct: 357 FCKAMDDDFNTALAISVMF 375
>gi|206890680|ref|YP_002249765.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
11347]
gi|226735066|sp|B5YID4.1|SYC_THEYD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|206742618|gb|ACI21675.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 487
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/432 (43%), Positives = 262/432 (60%), Gaps = 9/432 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++++N++T + E F PI KVG+Y CGVT YDL H+GHAR+AV FD++ +YL + EV
Sbjct: 1 MRVFNTLTDKLEEFKPINDKKVGIYACGVTVYDLCHIGHARSAVVFDVIVKYLRYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDKII RAN G + ++ +Y EY DM L +P+ ++H+ ++
Sbjct: 61 KFVKNFTDIDDKIINRANKEGVSWKEIAEKYTGEYYKDMDRLGITRADIEPKATEHINEM 120
Query: 139 KDMITQIINNDCAYVVE----GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNP 194
++I +IN AY +E V+F+VEK P YG+LS ++++ +G RV VD RK++P
Sbjct: 121 IEIIQTLINKGYAYEIEEGQAKSVYFSVEKFPQYGKLSKKKIDELISGARVEVDERKKSP 180
Query: 195 ADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
DFALWKA+K GEP WDSPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENE
Sbjct: 181 LDFALWKASKPGEPWWDSPWGKGRPGWHIECSAMSIKYLGETFDIHGGGADLIFPHHENE 240
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A YW+HNG VT N EKMSKSLGN IR + + Y ALR FL+S+HY
Sbjct: 241 IAQSEAFTGKPFAKYWIHNGFVTINKEKMSKSLGNVLNIRDLLDIYDAEALRLFLLSSHY 300
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
RSP+ ++ + A V +Y T+ E + + K++ + + L+ EF
Sbjct: 301 RSPIEFAHEYIKEAEATVDRVYSTIMRIE-DFEKIEINDKSSIEFDKVKAMLENLKPEFE 359
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT+ L F+ FI + KK + +++ + + ++ E+ VL +
Sbjct: 360 KAMDDDFNTAKALGILFE----FIKEINRFMDKKPSQNKEIDFLVTAKRAIKEIGSVLNL 415
Query: 435 LGLLPPGAYSEV 446
P Y ++
Sbjct: 416 FQRQPVDWYRDL 427
>gi|134045577|ref|YP_001097063.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C5]
gi|132663202|gb|ABO34848.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C5]
Length = 476
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/374 (46%), Positives = 235/374 (62%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YN++T+++E F P+ +V MYVCG T YD +H GH R VSFD++ RYLEH+ V
Sbjct: 2 LKVYNTLTRKEEEFKPLTEKEVKMYVCGPTVYDHTHFGHGRTYVSFDIIRRYLEHIGYTV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
V NFTD+DDKII+RAN+ G+NP LS ++ +L DMA L+ P P+V++H+ +I
Sbjct: 62 NLVINFTDIDDKIIKRANEKGKNPQELSEQFINVFLNDMATLKVKPADIYPKVTEHIPEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I ++I AY E V+F V+K NYG+LS LE+ +G R+ +K+NP DFA
Sbjct: 122 IAFIEKLIEKGFAYKTENGVYFEVKKFENYGKLSNINLEDLYSGVRIETSEKKKNPEDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK EP W+SP+G GRPGWHIECSAMS+ YL +FDIHGGG DL FPHHENEIAQS
Sbjct: 182 LWKTAKPREPKWESPFGEGRPGWHIECSAMSSKYLGKQFDIHGGGRDLSFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V+YW+H G V N EKMSKSLGNF TI I++ Y P LR F I HYRSP+
Sbjct: 242 VAYSGKDWVNYWLHTGFVMVNGEKMSKSLGNFVTIEDISKEYDPEILRFFFIQRHYRSPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
+Y+ + + + IY +++ ++L ++ G D + + F+ M+
Sbjct: 302 DYTAESMTHVKNNLEKIYNVIENIRISLEKSKKSGAWGENEFLLYDILKNSKHNFYEAMN 361
Query: 379 DDLNTSHILTGAFQ 392
D NT L F+
Sbjct: 362 SDFNTVEALKSVFE 375
>gi|85713337|ref|ZP_01044354.1| cysteinyl-tRNA synthetase [Idiomarina baltica OS145]
gi|85692839|gb|EAQ30820.1| cysteinyl-tRNA synthetase [Idiomarina baltica OS145]
Length = 460
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/377 (50%), Positives = 244/377 (64%), Gaps = 15/377 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L ++N++T++KE FTP G+VGMYVCGVT YDL H+GHAR V+FD++ RYL +
Sbjct: 1 MALTLFNTLTREKETFTPREAGRVGMYVCGVTTYDLCHIGHARTYVAFDVVVRYLRKIGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN TD+DDKII+RA + GE +L+ RY E D A L L P +PRV+ HM+
Sbjct: 61 DVTYVRNITDLDDKIIKRAAENGEPFDALTQRYIDEMHRDFAALNLLEPDVEPRVTQHMD 120
Query: 137 QIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
I MI ++ AY + GDV F V +YGRLS Q LE +AG RV V++ K +P
Sbjct: 121 DIIRMIESLVTQGYAYQADNGDVLFDVSTFDDYGRLSRQNLEQLQAGARVDVEASKLDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AKAGEPSWDSPWG GRPGWHIECSAM+ +L FDIHGGG DL FPHHENEI
Sbjct: 181 DFVLWKKAKAGEPSWDSPWGEGRPGWHIECSAMNKAHLGETFDIHGGGSDLTFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQSC A Q + V+YWMH+G V ++ KMSKSLGNFFTIR + Y +R+FL+S+HYR
Sbjct: 241 AQSCCANQTNYVNYWMHSGMVQVDDVKMSKSLGNFFTIRDVLNAYDAETVRYFLLSSHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
S LNY+ L+ A A+ +Y L+ L+P Q E+ ++F
Sbjct: 301 SQLNYTQDNLEQAHAALERLYTALR----GLTPEQPD----------ENLRLPYWNQFTD 346
Query: 376 RMSDDLNTSHILTGAFQ 392
M+DD N ++ F+
Sbjct: 347 AMNDDFNAPEAMSVLFE 363
>gi|418464825|ref|ZP_13035764.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|359756780|gb|EHK90937.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
RhAA1]
Length = 459
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 259/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IDIVQKLIQRGHAYVADNGDVMFDVESFKGYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 242 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLSHYDAESVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 302 LNYSEENLNLAHGALERLYTALRGTDKSAVAF-----------GGENFV----DAFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSALFEMA-----RELNKLKTED--------MAKANGLAARLRELAAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|61216275|sp|Q7NX82.2|SYC_CHRVO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 457
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/383 (49%), Positives = 241/383 (62%), Gaps = 19/383 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T+QKE F PI GKV MYVCG+T YDL H+GHAR +FD++YR+L+ +V
Sbjct: 2 LSLYNTLTRQKEAFKPIEPGKVSMYVCGMTVYDLCHIGHARMLAAFDVIYRWLKASGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD++DKII+RA + G P L + D A L LPPT++PR + H+ +
Sbjct: 62 NYVRNITDIEDKIIKRALERGITPEQLVEETIADMRQDAAALGLLPPTHEPRATHHVGGM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI Q+I N AY GDV++AV + YG+LSG+ L+ RAGERV VD KR+P DF
Sbjct: 122 VAMIEQLIANGKAYPAANGDVYYAVREFEGYGKLSGRTLDKLRAGERVEVDPNKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEPSWDSPWG GRPGWHIECS MS H+L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPSWDSPWGKGRPGWHIECSVMSCHHLGEHFDIHGGGEDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YW+HNG + + EKMSKSLGNFFTIR + + + +R F++ +HYRSP
Sbjct: 242 SEGAHGHQYVNYWLHNGFINVDGEKMSKSLGNFFTIRDVLQHFDGEVIRFFIVRSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE--HGKTARINPAAEDC---------- 365
+NY+ L+ A + +Y L+ E+ S + H AR A +D
Sbjct: 302 VNYTDSILNDAKHGLTRLYTALRGIELPTSDGIDWNHAYAARFKAAMDDDFGTSEAVAVL 361
Query: 366 ------INKLRDEFHARMSDDLN 382
+NK RD AR+ DL
Sbjct: 362 FELAGEVNKSRDPQLARLLKDLG 384
>gi|418481027|ref|ZP_13050077.1| cysteinyl-tRNA synthetase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
gi|384571373|gb|EIF01909.1| cysteinyl-tRNA synthetase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
Length = 460
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/420 (46%), Positives = 265/420 (63%), Gaps = 30/420 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RAN+ GE SL+ R E D L P +PR ++++ +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGETCDSLTERLIGEMHADFDALNMKRPDIEPRATEYIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F + K +YG+LS Q LE +AG RV ++S KR+ DF
Sbjct: 122 IELVQKLIERGFAYVADNGDVMFEIAKYDDYGKLSRQDLEQLQAGARVEIESAKRSSLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y P +R+FL+S HYRS
Sbjct: 242 SCCAHGTDYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y +L+ +++ PAA E+ + + F
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDLS-------------TPAAGGEEYVKR----FTE 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + ++ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RVKTEDIATASALGSLMRELADVIGIL 394
>gi|323494384|ref|ZP_08099494.1| cysteinyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
gi|323311367|gb|EGA64521.1| cysteinyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
Length = 460
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/420 (46%), Positives = 264/420 (62%), Gaps = 30/420 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV GDV F V+K YG+LS Q L+ +AG RV VDS KR+P DF
Sbjct: 122 IELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDSAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLNHYDSETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y +L+ ++ PAA E+ +++ F
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDLT-------------TPAAGGEEYVSR----FTE 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + ++ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RIKAEDIAAASALGSLMRELADVIGIL 394
>gi|282850303|ref|ZP_06259682.1| cysteine--tRNA ligase [Veillonella parvula ATCC 17745]
gi|294793811|ref|ZP_06758948.1| cysteine--tRNA ligase [Veillonella sp. 3_1_44]
gi|282579796|gb|EFB85200.1| cysteine--tRNA ligase [Veillonella parvula ATCC 17745]
gi|294455381|gb|EFG23753.1| cysteine--tRNA ligase [Veillonella sp. 3_1_44]
Length = 482
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/429 (44%), Positives = 273/429 (63%), Gaps = 25/429 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+MT+QKE+F P+ G+ MYVCGVT Y+ H+G+AR V++D++ RY++H+ +V
Sbjct: 4 ITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G + +++NRY Y M L PRVS H++ I
Sbjct: 64 TYVQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDALGVQRADIYPRVSTHIDDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI +I+ AY ++GDV+++VEK +YG LSG+ L++ AG R+ VD RK+NP DFA
Sbjct: 124 IAMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C+ Q V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRS
Sbjct: 244 EGCSG-QHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL------- 369
PL++S +L+ A+ ++L+ A+ + P + D +L
Sbjct: 303 PLDFSDERLEEAN-------KSLERLSTAIENLL---YLEKCEPGSCDEAQRLLEKAKAY 352
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
+EF MSDD NT+ + F + +N+ + ++ + E++ +++ K
Sbjct: 353 EEEFEDAMSDDFNTALATSSMFG-----LAKEINIYYQAVTSREGVVCQEAIAEVKRIFK 407
Query: 430 EVLRILGLL 438
+ ++G+L
Sbjct: 408 FMTDVIGVL 416
>gi|410628124|ref|ZP_11338853.1| cysteinyl-tRNA synthetase [Glaciecola mesophila KMM 241]
gi|410152346|dbj|GAC25622.1| cysteinyl-tRNA synthetase [Glaciecola mesophila KMM 241]
Length = 464
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/384 (48%), Positives = 244/384 (63%), Gaps = 16/384 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T+QKELFTP+ KVG+YVCG+T YDLSH+GHAR +SFDL+ RYL H +V
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRYLRHKGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE +L+ R D A + L P +PRV+ HM +I
Sbjct: 62 NYVRNITDIDDKIIQRANENGETTSALTERTIAMMHEDFAAIGLLEPDIEPRVTTHMPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++I AY + GDV F V +YG+LS Q L+ G RV VDS K +P DF
Sbjct: 122 VAIIERLIQRGHAYQAKSGDVLFDVSSYADYGKLSKQDLDQLNMGSRVDVDSDKDDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK K GEPSW SPWG GRPGWHIECSAM+ +L FDIHGGG DLIFPHHENE+AQ
Sbjct: 182 VLWKTVKPGEPSWSSPWGEGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G V ++EKMSKSLGNFFT+R + +++ LR+FL+SAHYRS
Sbjct: 242 SCCAYDTPYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVLQQHDAETLRYFLMSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS + A A+ +Y +L+D + R++ + D + + F M
Sbjct: 302 LSYSENNITQARSALERLYTSLRDVKA----------NTRVDMQSTDYLTR----FDKAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSS 401
DD NT + F D K +N +
Sbjct: 348 DDDFNTPEAMAVLF-DVAKELNRA 370
>gi|260424802|ref|ZP_05733345.2| cysteine--tRNA ligase [Dialister invisus DSM 15470]
gi|260403249|gb|EEW96796.1| cysteine--tRNA ligase [Dialister invisus DSM 15470]
Length = 488
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/424 (45%), Positives = 267/424 (62%), Gaps = 16/424 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T +K +F P+V G+V +YVCGVT Y+ H+G+AR AV++D++ RYL+H+ +V
Sbjct: 11 IKVYNTLTGEKTVFRPLVPGEVKIYVCGVTPYNHPHIGNARPAVTWDVICRYLKHIGYKV 70
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTDVDDKII +AN G + ++S+RY Y M + PRVSDHM+ I
Sbjct: 71 EFVQNFTDVDDKIINKANAEGSDWKTISDRYIDAYFQVMDAMHVRRADVYPRVSDHMQDI 130
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
DM+ +I+ AYV+ DV++ + +YG LSG+++++ AG R+ V+ KRNP DFA
Sbjct: 131 IDMVQGLIDKGHAYVLGNDVYYDISTFEHYGALSGRKIDDMLAGARIEVNEGKRNPGDFA 190
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP W+SPWG GRPGWHIECSAMS HYL FD HGGG DLIFPHHENEIAQS
Sbjct: 191 LWKGAKPGEPFWESPWGKGRPGWHIECSAMSVHYLGKTFDFHGGGSDLIFPHHENEIAQS 250
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C C+ V+YW+HNG +T N+EKMSKSL NFF + + + Y ALR+FL+S YR+
Sbjct: 251 EGCTGCK--FVNYWLHNGFITINSEKMSKSLNNFFLAKDVLKEYSGDALRYFLLSVQYRN 308
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTAR-INPAAEDCINKLRDEFH 374
PL+YS +LD A + + ++ E+A E +R + AAE+ + FH
Sbjct: 309 PLDYSRDRLDEAEKNMERLSGVIRRLKELAAKEGAEKTDASRSLEKAAEESLKA----FH 364
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT + TGA D K IN + E++ K +K ++ I
Sbjct: 365 EAMDDDFNTG-LATGAMFDLAKAINIYGTAVDGGLSVDH-----EAVEKAYTALKTIMDI 418
Query: 435 LGLL 438
LG+L
Sbjct: 419 LGIL 422
>gi|229523866|ref|ZP_04413271.1| cysteinyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
gi|229337447|gb|EEO02464.1| cysteinyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
Length = 459
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/420 (46%), Positives = 262/420 (62%), Gaps = 30/420 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V + YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVSRYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ + + F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEEYVTR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + ++ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDMTNASALGSLMRELADVIGIL 394
>gi|94265990|ref|ZP_01289713.1| Cysteine--tRNA ligase [delta proteobacterium MLMS-1]
gi|93453456|gb|EAT03872.1| Cysteine--tRNA ligase [delta proteobacterium MLMS-1]
Length = 494
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/432 (43%), Positives = 262/432 (60%), Gaps = 14/432 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ + I+N+ T +KE FTP+ V MYVCG+T YD H+GHAR+ + FD+LYRYL H +
Sbjct: 1 MPILIHNTKTNRKEPFTPLTDNHVRMYVCGITVYDYCHIGHARSVLVFDMLYRYLRHRRY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+VRNFTD+DDKII+RA + + LS R+ Q + DMA L PPT +P+ ++H+
Sbjct: 61 DVTFVRNFTDIDDKIIKRAAEQQTSCQELSQRFIQAFHEDMAALGTEPPTLEPKATEHLP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ +I ++I AY GDV+F V YG+LS + L+ R+G R+AV+ K +P D
Sbjct: 121 EMIALIEELIAKGLAYPAGGDVYFRVRNFTEYGKLSHRALDEMRSGARIAVNELKEDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +K EP+W+SPWGPGRPGWHIECSAM YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FVLWKGSKPEEPAWESPWGPGRPGWHIECSAMGRKYLGETFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A ++W+H+G VT +EKM+KSLGNF TIR + ++Y LR L S HYR+
Sbjct: 241 QSEGATGKPFANFWIHHGFVTIKDEKMAKSLGNFLTIRDVLKQYPAEVLRLLLFSTHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG---KTARINPAAEDCINKLRDEF 373
P++YS + A A+ +Y L A+ G T+ I ++ L +F
Sbjct: 301 PVDYSEAAMADAETALSRLYAAL----AAVGKLPAGGAPEATSVITAKDRQKLDNLESDF 356
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
H M D N++ L G F D +K IN +++ P +E LR +++E+
Sbjct: 357 HQAMDIDFNSAKAL-GRFFDTVKIINK----VRQALPATPATRDLELLRDSAAKLRELGG 411
Query: 434 ILGLLP--PGAY 443
I GLL P AY
Sbjct: 412 IFGLLQEDPAAY 423
>gi|262404192|ref|ZP_06080747.1| cysteinyl-tRNA synthetase [Vibrio sp. RC586]
gi|262349224|gb|EEY98362.1| cysteinyl-tRNA synthetase [Vibrio sp. RC586]
Length = 459
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/420 (47%), Positives = 262/420 (62%), Gaps = 30/420 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENSETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV V++ KR+P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLDQLQAGARVDVEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ + + F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RTVPAAGGEEYLTR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + L+ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDLTNASALGSLMCELADVIGIL 394
>gi|297579367|ref|ZP_06941295.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC385]
gi|417825068|ref|ZP_12471656.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE48]
gi|422909615|ref|ZP_16944258.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-09]
gi|422923151|ref|ZP_16956313.1| cysteinyl-tRNA synthetase [Vibrio cholerae BJG-01]
gi|429886116|ref|ZP_19367682.1| Cysteinyl-tRNA synthetase [Vibrio cholerae PS15]
gi|297536961|gb|EFH75794.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC385]
gi|340046553|gb|EGR07483.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE48]
gi|341634699|gb|EGS59448.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-09]
gi|341644386|gb|EGS68602.1| cysteinyl-tRNA synthetase [Vibrio cholerae BJG-01]
gi|429227010|gb|EKY33067.1| Cysteinyl-tRNA synthetase [Vibrio cholerae PS15]
Length = 459
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/420 (46%), Positives = 262/420 (62%), Gaps = 30/420 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V + YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVSRYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ + + F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEEYVTR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + ++ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDMTNASALGSLMRELADVIGIL 394
>gi|345021352|ref|ZP_08784965.1| cysteinyl-tRNA synthetase [Ornithinibacillus scapharcae TW25]
Length = 466
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/433 (45%), Positives = 261/433 (60%), Gaps = 23/433 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+++ IYN++T+ K+ F PI GKV MYVCG T Y+ H+G+AR A+ FD + RYLE+
Sbjct: 1 MSITIYNTLTRDKQEFKPIEDGKVRMYVCGPTVYNYIHIGNARPAIVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V YV NFTDVDDKII+RAN+LGE+ ++SNRY YL D+ L TY PRV+D M+
Sbjct: 61 HVDYVLNFTDVDDKIIKRANELGEDVFAVSNRYIDAYLEDVEKLGVKKATYNPRVTDTMQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I I+ ++ AY EGDV+F YG+LS Q ++ R+G R+ V +K +P D
Sbjct: 121 DIIVFISNLVEKGYAYEAEGDVYFKPRAFEEYGKLSHQSIDELRSGARIQVGEKKDDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE SWDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEISWDSPWGLGRPGWHIECSAMAKKYLGDTIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + +YWMHNG++ NNEKMSKSLGNF R + E++ P +R F++S YR
Sbjct: 241 QSEANNGKTFANYWMHNGYININNEKMSKSLGNFVLTRDLLEKHDPDVIRFFMLSVQYRH 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-----DCINKLRD 371
P+N+S L+SA +++ I Q+ H K++ N + I+ LR
Sbjct: 301 PINFSEELLESAKNSLERIKTAYQNL--------GHRKSSSTNLDDNTTEWLEKISALRK 352
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
+F M DD NT++ ++ F D K N LN K +IE+ +N +K
Sbjct: 353 KFETEMDDDFNTANAISVLF-DLTKEANVYLN------EKHTSPEVIEAF---QNLLKSF 402
Query: 432 LRILGLLPPGAYS 444
L ILG+ G S
Sbjct: 403 LEILGIKLEGNVS 415
>gi|429732608|ref|ZP_19267211.1| cysteine--tRNA ligase [Aggregatibacter actinomycetemcomitans Y4]
gi|429155731|gb|EKX98388.1| cysteine--tRNA ligase [Aggregatibacter actinomycetemcomitans Y4]
Length = 459
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 260/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ ++I AYV + GDV F VE +YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IDIVEKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 242 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 302 LNYSEENLNLAHGALERLYTALRGIDKSAVAF-----------GGENFV----DAFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MAKANGLAARLRELAAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|421351582|ref|ZP_15801947.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-25]
gi|395952027|gb|EJH62641.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-25]
Length = 459
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/420 (46%), Positives = 261/420 (62%), Gaps = 30/420 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V + YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ + + F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEEYVTR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F I +N L K + ++ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLFD-----IAREINRL-----KSEDMTNASALGSLMRELADVIGIL 394
>gi|109898207|ref|YP_661462.1| cysteinyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
gi|109700488|gb|ABG40408.1| cysteinyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
Length = 464
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/384 (49%), Positives = 244/384 (63%), Gaps = 16/384 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T+QKELFTP+ KVG+YVCG+T YDLSH+GHAR +SFDL+ RYL H EV
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRYLRHKGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE L+ R D A + L P +PRV+ HM +I
Sbjct: 62 NYVRNITDIDDKIIQRANENGETTSELTERTIAMMHDDFAAIGLLAPDIEPRVTTHMPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++I AY + GDV F V +YG+LS Q L+ G RV VDS K +P DF
Sbjct: 122 IAIIERLIQRGHAYQAKSGDVLFDVSSYADYGKLSKQDLDQLNMGSRVDVDSDKDDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEPSW SPWG GRPGWHIECSAM+ +L FDIHGGG DLIFPHHENE+AQ
Sbjct: 182 VLWKTAKPGEPSWQSPWGDGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G V ++EKMSKSLGNFFT+R + +++ LR+FL+SAHYRS
Sbjct: 242 SCCAYDTPYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVLQQHDAETLRYFLMSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS + A A+ +Y +L+D + +++ + D + + F M
Sbjct: 302 LSYSQSNITQARSALERLYTSLRDVKA----------NTQVDMHSADYLTR----FDKAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSS 401
DD NT + F D K +N +
Sbjct: 348 DDDFNTPEAMAVLF-DVAKELNRA 370
>gi|354558420|ref|ZP_08977675.1| cysteinyl-tRNA synthetase [Desulfitobacterium metallireducens DSM
15288]
gi|353546898|gb|EHC16345.1| cysteinyl-tRNA synthetase [Desulfitobacterium metallireducens DSM
15288]
Length = 478
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/388 (46%), Positives = 247/388 (63%), Gaps = 2/388 (0%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++LK++N+M+ QKE F P GKV MY CG T Y+ H+G+ R V FD++ RYL + +
Sbjct: 1 MSLKLFNTMSHQKEEFKPRESGKVAMYTCGPTVYNYVHVGNGRMLVVFDMIRRYLMYKEY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+V+NFTDVDDKII+R + G +PL+LS +Y +EY D L LP T P+ ++H+
Sbjct: 61 DVTFVQNFTDVDDKIIKRGLEEGVDPLTLSRKYIEEYFKDAKALHVLPATVHPKATEHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ ++I +I AY V+GDV+FAV+K P YG+LSG+ LE+ +AG RV VD RK +P D
Sbjct: 121 EMLEIIQGLITKGLAYEVDGDVYFAVDKFPQYGKLSGRSLEDMQAGARVDVDERKNHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK EPSW SPWG GRPGWHIEC+AMS YL + FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKKAKPDEPSWKSPWGEGRPGWHIECTAMSLKYLGAGFDIHGGGGDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
QS + + YWMHN +T N +KMSKSLGNFFT+R+I + + LR +L+S HYR
Sbjct: 241 QSEGYLEGKPFAHYWMHNAFLTFNQQKMSKSLGNFFTVREILDHFSGEVLRFYLLSTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPL++ L A + + +++ AL+ +N +F A
Sbjct: 301 SPLDFDDENLRMAQKGLERLQTSIRLAAEALTKKGPVEIKLEMNEELVKASETAHRDFEA 360
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLN 403
M DD N++ F+ K IN+ L
Sbjct: 361 AMDDDFNSALAYASLFELG-KHINTLLQ 387
>gi|294791947|ref|ZP_06757095.1| cysteine--tRNA ligase [Veillonella sp. 6_1_27]
gi|294457177|gb|EFG25539.1| cysteine--tRNA ligase [Veillonella sp. 6_1_27]
Length = 482
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/429 (44%), Positives = 273/429 (63%), Gaps = 25/429 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+MT+QKE+F P+ G+ MYVCGVT Y+ H+G+AR V++D++ RY++H+ +V
Sbjct: 4 ITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G + +++NRY Y M L PRVS H++ I
Sbjct: 64 TYVQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDVLGVQRADIYPRVSTHIDDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI +I+ AY ++GDV+++VEK +YG LSG+ L++ AG R+ VD RK+NP DFA
Sbjct: 124 IAMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKAAKHGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C+ Q V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRS
Sbjct: 244 EGCSG-QHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL------- 369
PL++S +L+ A+ ++L+ A+ + P + D +L
Sbjct: 303 PLDFSDERLEEAN-------KSLERLSTAIENLL---YLEKCEPGSCDEAQRLLEKAKAY 352
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
+EF MSDD NT+ + F + +N+ + ++ + E++ +++ K
Sbjct: 353 EEEFEDAMSDDFNTALATSSMFG-----LAKEINIYYQAVTSREGVVCQEAIAEVKRIFK 407
Query: 430 EVLRILGLL 438
+ ++G+L
Sbjct: 408 FMTDVIGVL 416
>gi|387120512|ref|YP_006286395.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|415765542|ref|ZP_11482787.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|416040248|ref|ZP_11574423.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|347993896|gb|EGY35223.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|348653831|gb|EGY69504.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|385875004|gb|AFI86563.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 469
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 260/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ ++I AYV + GDV F VE +YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 132 IDIVEKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNPMDF 191
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 311
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGIDKSAVAF-----------GGENFV----DAFREAM 356
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 357 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MAKANGLAARLRELAAILGL 403
Query: 438 L 438
L
Sbjct: 404 L 404
>gi|153830573|ref|ZP_01983240.1| cysteinyl-tRNA synthetase [Vibrio cholerae 623-39]
gi|229520308|ref|ZP_04409734.1| cysteinyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
gi|229529129|ref|ZP_04418519.1| cysteinyl-tRNA synthetase [Vibrio cholerae 12129(1)]
gi|254292163|ref|ZP_04962934.1| cysteinyl-tRNA synthetase [Vibrio cholerae AM-19226]
gi|417821192|ref|ZP_12467806.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE39]
gi|419830317|ref|ZP_14353802.1| cysteine--tRNA ligase [Vibrio cholerae HC-1A2]
gi|419837569|ref|ZP_14361007.1| cysteine--tRNA ligase [Vibrio cholerae HC-46B1]
gi|421343906|ref|ZP_15794309.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-43B1]
gi|421354512|ref|ZP_15804844.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-45]
gi|422307789|ref|ZP_16394944.1| cysteine--tRNA ligase [Vibrio cholerae CP1035(8)]
gi|422917697|ref|ZP_16952015.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-02A1]
gi|423735520|ref|ZP_17708717.1| cysteine--tRNA ligase [Vibrio cholerae HC-41B1]
gi|423822603|ref|ZP_17716613.1| cysteine--tRNA ligase [Vibrio cholerae HC-55C2]
gi|423855994|ref|ZP_17720418.1| cysteine--tRNA ligase [Vibrio cholerae HC-59A1]
gi|423882868|ref|ZP_17724005.1| cysteine--tRNA ligase [Vibrio cholerae HC-60A1]
gi|423956069|ref|ZP_17734908.1| cysteine--tRNA ligase [Vibrio cholerae HE-40]
gi|423985139|ref|ZP_17738457.1| cysteine--tRNA ligase [Vibrio cholerae HE-46]
gi|423998127|ref|ZP_17741379.1| cysteine--tRNA ligase [Vibrio cholerae HC-02C1]
gi|424009862|ref|ZP_17752799.1| cysteine--tRNA ligase [Vibrio cholerae HC-44C1]
gi|424017020|ref|ZP_17756850.1| cysteine--tRNA ligase [Vibrio cholerae HC-55B2]
gi|424019945|ref|ZP_17759731.1| cysteine--tRNA ligase [Vibrio cholerae HC-59B1]
gi|424625311|ref|ZP_18063772.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-50A1]
gi|424629797|ref|ZP_18068084.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-51A1]
gi|424633841|ref|ZP_18071941.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-52A1]
gi|424636921|ref|ZP_18074929.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-55A1]
gi|424640833|ref|ZP_18078716.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-56A1]
gi|424648900|ref|ZP_18086563.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-57A1]
gi|443527820|ref|ZP_21093869.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-78A1]
gi|148873935|gb|EDL72070.1| cysteinyl-tRNA synthetase [Vibrio cholerae 623-39]
gi|150421926|gb|EDN13902.1| cysteinyl-tRNA synthetase [Vibrio cholerae AM-19226]
gi|229332903|gb|EEN98389.1| cysteinyl-tRNA synthetase [Vibrio cholerae 12129(1)]
gi|229342674|gb|EEO07666.1| cysteinyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
gi|340038823|gb|EGQ99797.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE39]
gi|341636579|gb|EGS61273.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-02A1]
gi|395939986|gb|EJH50667.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-43B1]
gi|395953637|gb|EJH64250.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-45]
gi|408012740|gb|EKG50509.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-50A1]
gi|408018373|gb|EKG55826.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-52A1]
gi|408023551|gb|EKG60712.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-56A1]
gi|408024210|gb|EKG61335.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-55A1]
gi|408033180|gb|EKG69738.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-57A1]
gi|408055353|gb|EKG90286.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-51A1]
gi|408618993|gb|EKK92040.1| cysteine--tRNA ligase [Vibrio cholerae CP1035(8)]
gi|408620090|gb|EKK93102.1| cysteine--tRNA ligase [Vibrio cholerae HC-1A2]
gi|408629831|gb|EKL02495.1| cysteine--tRNA ligase [Vibrio cholerae HC-41B1]
gi|408634579|gb|EKL06814.1| cysteine--tRNA ligase [Vibrio cholerae HC-55C2]
gi|408640897|gb|EKL12679.1| cysteine--tRNA ligase [Vibrio cholerae HC-59A1]
gi|408640992|gb|EKL12773.1| cysteine--tRNA ligase [Vibrio cholerae HC-60A1]
gi|408657928|gb|EKL29003.1| cysteine--tRNA ligase [Vibrio cholerae HE-40]
gi|408664537|gb|EKL35371.1| cysteine--tRNA ligase [Vibrio cholerae HE-46]
gi|408852482|gb|EKL92304.1| cysteine--tRNA ligase [Vibrio cholerae HC-02C1]
gi|408856117|gb|EKL95812.1| cysteine--tRNA ligase [Vibrio cholerae HC-46B1]
gi|408860082|gb|EKL99733.1| cysteine--tRNA ligase [Vibrio cholerae HC-55B2]
gi|408863657|gb|EKM03131.1| cysteine--tRNA ligase [Vibrio cholerae HC-44C1]
gi|408867039|gb|EKM06401.1| cysteine--tRNA ligase [Vibrio cholerae HC-59B1]
gi|443453692|gb|ELT17510.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-78A1]
Length = 459
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/420 (46%), Positives = 262/420 (62%), Gaps = 30/420 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V + YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ + + F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEEYVTR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + ++ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDMTNASALGSLMRELADVIGIL 394
>gi|229515228|ref|ZP_04404688.1| cysteinyl-tRNA synthetase [Vibrio cholerae TMA 21]
gi|229347933|gb|EEO12892.1| cysteinyl-tRNA synthetase [Vibrio cholerae TMA 21]
Length = 459
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/420 (46%), Positives = 261/420 (62%), Gaps = 30/420 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AY+ + GDV F V + YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IALVERLIERGFAYIADNGDVMFEVSRYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ + + F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEEYVTR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F I +N L K + ++ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLFD-----IAREINRL-----KSEDMTNASALGSLMRELADVIGIL 394
>gi|108706129|gb|ABF93924.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|108706132|gb|ABF93927.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
Length = 420
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/352 (54%), Positives = 239/352 (67%), Gaps = 23/352 (6%)
Query: 117 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 176
MA LQCLPPT +PRV+DH+E I ++IT+I+ N AY +EGDV+F+V+ P Y LSG++L
Sbjct: 1 MAQLQCLPPTCEPRVTDHIEHIIELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKL 60
Query: 177 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 236
++N AG RVAVD+RKRNPADFALWKAAK GEP WDSPWG GRPGWHIECSAMSAHYL
Sbjct: 61 DHNLAGSRVAVDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHV 120
Query: 237 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 296
FDIHGGG DLIFPHHENE+AQS AA +S V WMHNG V +++KMSKS NFFTIR I
Sbjct: 121 FDIHGGGKDLIFPHHENELAQSRAAYPESEVKCWMHNGFVNKDDQKMSKSDKNFFTIRDI 180
Query: 297 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 356
+ YHP+ALR FL+ HYR +N+S L+ ASD V+YIYQTL DCE LS ++ +
Sbjct: 181 IDLYHPMALRFFLMRTHYRGDVNHSDKALEIASDRVYYIYQTLYDCEEVLSQYRGENISV 240
Query: 357 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL- 415
+ +D +NK EF M+DDL T+ +L G F D LK INS+LN KK Q K +Q
Sbjct: 241 PVPVEEQDMVNKHHSEFLESMADDLRTTDVLDG-FTDLLKAINSNLNDFKKLQQKLEQQK 299
Query: 416 ---------------------SLIESLRKIENEVKEVLRILGLLPPGAYSEV 446
I+++ +E E+K + ILGL+PP + +E
Sbjct: 300 KKQQQQKQQKQKQQQAQKQPEEYIQAMFALETEIKNKISILGLMPPSSLAEA 351
>gi|300311195|ref|YP_003775287.1| cysteinyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
gi|300073980|gb|ADJ63379.1| cysteinyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
Length = 463
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/436 (47%), Positives = 265/436 (60%), Gaps = 49/436 (11%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ + K+ F+PI GKV +YVCG+T YD H+GHAR V FD++ R+L EV
Sbjct: 4 LKIYNTLARDKQTFSPIEPGKVRLYVCGMTVYDYCHIGHARVLVVFDMVQRWLRASGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + GE L+NR+ D A L P ++PR + ++ Q+
Sbjct: 64 TYVRNITDIDDKIIKRAVENGETIAQLTNRFIDAMNEDAAALGVQRPDHEPRATQYVPQM 123
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+I ++ N AY +GDV ++V P YG+LSG+ L++ RAGERV V++ KR+P DF
Sbjct: 124 LDLIGKLEKNGLAYKASDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDPLDF 183
Query: 198 ALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWKAAK EP WDSPWG GRPGWHIECSAMS+ L FDIHGGG DL FPHHENE
Sbjct: 184 VLWKAAKPAEPDEAKWDSPWGCGRPGWHIECSAMSSDLLGDHFDIHGGGQDLQFPHHENE 243
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A Q + V+YWMHNG V +NEKMSKSLGNFFTIR + ++Y P LR F++ AHY
Sbjct: 244 IAQSEGAHQHTFVNYWMHNGFVRIDNEKMSKSLGNFFTIRDVLKKYDPEVLRFFILRAHY 303
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
RSPLNYS LD A A+ +Y L+D P Q G A DE H
Sbjct: 304 RSPLNYSDAHLDDARQALTRLYTALKDV-----PPQAGGLVA--------------DEAH 344
Query: 375 A-----RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
A ++DD NT + F+ A + +N S + ++ +Q +K
Sbjct: 345 AVRLADALNDDFNTPVAIAVLFELANE-VNRSRSPVQARQ------------------LK 385
Query: 430 EVLRILGLL--PPGAY 443
+ ILGLL PG Y
Sbjct: 386 ALAGILGLLQREPGEY 401
>gi|416044172|ref|ZP_11574948.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|416058943|ref|ZP_11580697.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
gi|347996476|gb|EGY37551.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|347999327|gb|EGY40169.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
Length = 469
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 260/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ ++I AYV + GDV F VE +YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 132 IDIVEKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNPMDF 191
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 311
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGIDKSAVAF-----------GGENFV----DAFREAM 356
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 357 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MAKANGLAARLRELAAILGL 403
Query: 438 L 438
L
Sbjct: 404 L 404
>gi|320156698|ref|YP_004189077.1| cysteinyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
gi|56749448|sp|Q7MLR5.2|SYC_VIBVY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|319932010|gb|ADV86874.1| cysteinyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
Length = 460
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/418 (46%), Positives = 262/418 (62%), Gaps = 26/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE SL+ R E D L P +PR + ++++I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGETCDSLTERLIGEMHADFDALNMKRPDVEPRATQYIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV V++ KR P DF
Sbjct: 122 IELVERLIERGFAYVADNGDVMFEVNKFDEYGKLSKQDLDQLQAGARVDVETAKRCPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ + + +P E+ +++ F A M
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDFSAAP-----------AGGEEYVSR----FTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+DD NT + F D + IN + K + L+ +L + E+ +V+ IL
Sbjct: 347 NDDFNTPEAYSVLF-DMAREIN---------RLKTEDLANASALGALMRELADVIGIL 394
>gi|161501802|ref|NP_761714.2| cysteinyl-tRNA synthetase [Vibrio vulnificus CMCP6]
gi|30316151|sp|Q8D8R1.2|SYC_VIBVU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|319999475|gb|AAO11241.2| cysteinyl-tRNA synthetase [Vibrio vulnificus CMCP6]
Length = 460
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/418 (46%), Positives = 262/418 (62%), Gaps = 26/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE SL+ R E D L P +PR + ++++I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGETCDSLTERLIGEMHADFDALNMKRPDVEPRATQYIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV V++ KR P DF
Sbjct: 122 IELVERLIERGFAYVADNGDVMFEVNKFDEYGKLSKQDLDQLQAGARVDVETAKRCPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ + + +P E+ +++ F A M
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDFSAAP-----------AGGEEYVSR----FTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+DD NT + F D + IN + K + L+ +L + E+ +V+ IL
Sbjct: 347 NDDFNTPEAYSVLF-DMAREIN---------RLKTEDLANASALGALMRELADVIGIL 394
>gi|260892309|ref|YP_003238406.1| cysteinyl-tRNA synthetase [Ammonifex degensii KC4]
gi|260864450|gb|ACX51556.1| cysteinyl-tRNA synthetase [Ammonifex degensii KC4]
Length = 474
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/382 (48%), Positives = 243/382 (63%), Gaps = 5/382 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++T++KE F P G+V MYVCG T Y+ HLG+ARA V FD + RYLE+ V
Sbjct: 2 IEVYNTLTKRKEPFVPREPGRVRMYVCGPTTYNYIHLGNARALVVFDTIRRYLEYRGFRV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDKII+RA + +P L+ +Y + Y D + PRVSDH+ +I
Sbjct: 62 FFVQNFTDIDDKIIKRAAEEKMDPQELALKYIEAYFEDADQINIKRADVHPRVSDHLPEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++I+ +I+ AY EGDV+FAV K P YG+LSG++L RAG RV KR+P DFA
Sbjct: 122 VELISILIDKGFAYAAEGDVYFAVRKFPAYGKLSGRQLSELRAGARVEPGENKRDPLDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEPSW SPWG GRPGWHIECSAM+ YL +FDIHGGG DLIFPHHENEIAQS
Sbjct: 182 LWKKAKPGEPSWPSPWGEGRPGWHIECSAMALKYLGPEFDIHGGGSDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA YW+HNG +T EKMSKSLGN F +R++ E Y P A+R FL+S HYRSPL
Sbjct: 242 EAATGRPFARYWLHNGFITVKEEKMSKSLGNVFLLRKVMELYPPPAVRLFLLSTHYRSPL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
Y+ L+ A+ A+ L+ + L Q+ + + ++K +F A M
Sbjct: 302 AYTPEYLEGAAKAL----SRLRSSWLFLQEAQKQAEESSGGTEQLARLDKWEQDFTAAMD 357
Query: 379 DDLNTSHILTGAFQDALKFINS 400
DD NT+ L F D INS
Sbjct: 358 DDFNTARAL-ALFFDLAHEINS 378
>gi|315633667|ref|ZP_07888957.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
gi|315477709|gb|EFU68451.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
Length = 459
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/421 (46%), Positives = 259/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L E+
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVVARYLRYLGYEL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCEQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL+SAHYRS
Sbjct: 242 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 302 LNYSEENLNLAHGALERLYTALRGTDKSAVAF-----------GGENFV----DTFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + ++ + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MDKANGLAARLRELAGILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|261868784|ref|YP_003256706.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|415770039|ref|ZP_11484654.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|416108703|ref|ZP_11591198.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|444346355|ref|ZP_21154322.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
gi|261414116|gb|ACX83487.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|348004228|gb|EGY44753.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|348657072|gb|EGY74669.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|443541696|gb|ELT52102.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
Length = 469
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 260/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ ++I AYV + GDV F VE +YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 132 IDIVQKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNPMDF 191
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 311
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGTDKSAVAF-----------GGENFV----DAFREAM 356
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 357 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MAKANGLAARLRELAAILGL 403
Query: 438 L 438
L
Sbjct: 404 L 404
>gi|416069686|ref|ZP_11583362.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|347999795|gb|EGY40610.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
Length = 469
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 260/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ ++I AYV + GDV F VE +YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 132 IDIVEKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNPMDF 191
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 311
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGIDKSAVAF-----------GGENFV----DAFREAM 356
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 357 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MAKANGLAARLRELAAILGL 403
Query: 438 L 438
L
Sbjct: 404 L 404
>gi|297537709|ref|YP_003673478.1| cysteinyl-tRNA synthetase [Methylotenera versatilis 301]
gi|297257056|gb|ADI28901.1| cysteinyl-tRNA synthetase [Methylotenera versatilis 301]
Length = 469
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/365 (52%), Positives = 243/365 (66%), Gaps = 20/365 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++K+ FTPIV GKV MYVCG+T YD HLGHAR V FD++ R+L V
Sbjct: 2 LKIYNTLAREKQTFTPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVSRWLRSSGYAV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RAN+ GE L+ R+ + D A L + P +P+ ++ ++ +
Sbjct: 62 TYVRNITDIDDKIIKRANENGETIGQLTQRFIEAMDEDSAKLGIIRPDIEPKATEFIDGM 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI+ +I AYV GDVF++V YG+LSG+ LE+ RAGERV VD+ K++P DF
Sbjct: 122 IQMISALIEKGFAYVAANGDVFYSVNNFEGYGKLSGKSLEDLRAGERVEVDTHKKDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPW-----GPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHE 252
LWK+ K EPSWDSP+ G GRPGWHIECSAMS+H+L FDIHGGG DL FPHHE
Sbjct: 182 VLWKSVKPNEPSWDSPFGGPNGGKGRPGWHIECSAMSSHHLGEHFDIHGGGQDLQFPHHE 241
Query: 253 NEIAQSCAA-------CQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 305
NEIAQS AA CQ V+YWMHNG V ++EKMSKSLGNFFTIR + E+Y +
Sbjct: 242 NEIAQSEAAHSHNGEPCQ--MVNYWMHNGFVRVDDEKMSKSLGNFFTIRTVLEKYDAEVV 299
Query: 306 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQD---CEVALSPFQEHGKTARINPAA 362
R F++ AHYRSPLNYS LD A A+ +Y +L+ +VA+ Q H +AR A
Sbjct: 300 RFFILRAHYRSPLNYSDQHLDDAKLALTRLYTSLRGHVVADVAIDWQQPH--SARFKEAM 357
Query: 363 EDCIN 367
+D N
Sbjct: 358 DDDFN 362
>gi|406980236|gb|EKE01868.1| hypothetical protein ACD_21C00032G0011 [uncultured bacterium]
Length = 459
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/374 (49%), Positives = 239/374 (63%), Gaps = 14/374 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN+ ++QKELF PI KVG+YVCG+T YD H+GH R + FD++ RYL + +V
Sbjct: 2 LHIYNTFSRQKELFKPISTPKVGLYVCGLTVYDNCHIGHGRLFIWFDVVVRYLRSVGYQV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA +L + +L+ R D L +PP ++PRV++H+ QI
Sbjct: 62 TYVRNITDIDDKIIKRAQELNIDYQTLTQRMIDSMHTDEKSLDVIPPDFEPRVTEHIPQI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+I +IN D AYV + GDV++ V K YG+L+ Q L + R G RV KR+P DF
Sbjct: 122 VDLIQTLINKDFAYVTKTGDVYYEVAKFKAYGKLAHQDLNSLRTGIRVETSEDKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EP W SPWG GRPGWHIECSAM+ YL FDIHGGG DL FPHH+NE+AQ
Sbjct: 182 VLWKAAKPNEPFWPSPWGNGRPGWHIECSAMAKKYLGENFDIHGGGNDLQFPHHQNELAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+YWMH G V N EKMSKSLGNFF +++ ++YHP LR+F++++HY+SP
Sbjct: 242 SEAANGCCFVNYWMHMGFVQVNQEKMSKSLGNFFVLKEALKKYHPEILRYFVVASHYQSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S L++A A+ Y TL+D +A N D N+ FHA M
Sbjct: 302 INFSENNLENAHAALQRFYITLRDLPIA-------------NTKDFDPKNQFNKRFHAAM 348
Query: 378 SDDLNTSHILTGAF 391
DD NT L F
Sbjct: 349 DDDFNTPEALAVLF 362
>gi|384424847|ref|YP_005634205.1| cysteinyl-tRNA synthetase [Vibrio cholerae LMA3984-4]
gi|327484400|gb|AEA78807.1| Cysteinyl-tRNA synthetase [Vibrio cholerae LMA3984-4]
Length = 459
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/420 (46%), Positives = 261/420 (62%), Gaps = 30/420 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V + YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ + + F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEEYVTR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + ++ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDMTNASALGSLMRELADVIGIL 394
>gi|254448716|ref|ZP_05062174.1| cysteinyl-tRNA synthetase [gamma proteobacterium HTCC5015]
gi|198261724|gb|EDY86011.1| cysteinyl-tRNA synthetase [gamma proteobacterium HTCC5015]
Length = 463
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/435 (44%), Positives = 271/435 (62%), Gaps = 29/435 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++++ K++F PI G+V +YVCG+T YD H+GHAR V+FD + RYL H +V
Sbjct: 1 MQIYNTLSRSKQVFEPIHPGQVRLYVCGITTYDYCHIGHARVMVAFDAITRYLRHRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKI++RA + GE +L+ R+ D L LPP +PR + H++ I
Sbjct: 61 TYVRNITDIDDKILKRAEENGEAYDTLTARFIDAMHEDERALGVLPPDREPRATQHIQDI 120
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+I +I+ AY E GDV+F+V +YG+LS ++LE+ G RV ++S KR+P DF
Sbjct: 121 IDLIQVLIDKGAAYTAENGDVYFSVSDFADYGKLSNKKLEDLLEGVRVELESSKRDPRDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK A+ + W++PWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 181 ALWKGAQQDQVGWEAPWGYGRPGWHIECSAMSTSCLGNHFDIHGGGPDLVFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA ++ + WMH G V +NEKMSKSLGNFFTIR++ E+Y P +R+FL+S+HYRSP
Sbjct: 241 SEAATGETYANVWMHAGAVRVDNEKMSKSLGNFFTIREVLEKYQPEVIRYFLLSSHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NYS L+ A + +Y AL P+ + + AA + L+ F M
Sbjct: 301 INYSDNSLEQARAGLERLY-------TALRPYSD----VAADEAALSDSSALQ-AFQQVM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L+ F A +Q QQ+ E+ R I ++K + R+LGL
Sbjct: 349 DDDFNTREALSVLFDLA-------------RQLNQQEG---EAARNIAVQLKTLGRVLGL 392
Query: 438 LPPGAYSEVKTAFLV 452
L A + +K+ LV
Sbjct: 393 LEGDAQAYLKSGGLV 407
>gi|335424982|ref|ZP_08553974.1| cysteinyl-tRNA synthetase [Salinisphaera shabanensis E1L3A]
gi|334886972|gb|EGM25316.1| cysteinyl-tRNA synthetase [Salinisphaera shabanensis E1L3A]
Length = 462
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/375 (48%), Positives = 244/375 (65%), Gaps = 15/375 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++++S++ Q++ + V +YVCGVTAYD HLGHAR + FD+ RYL + V
Sbjct: 2 IELHDSLSGQRQPLKTLEPDHVRLYVCGVTAYDYCHLGHARVMIVFDMFVRYLRAIGWRV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RAN+ GE P ++S R+ + D A L P+ +P + H++QI
Sbjct: 62 TYVRNVTDIDDKIINRANETGETPEAISTRFTEAMREDEAALGLKAPSAEPTATGHVDQI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I N AY + GDV++ V NYG LSG+RL + RAGER+AV+ K +P DF
Sbjct: 122 IAMIERLIENGAAYASDNGDVYYDVSTFDNYGALSGRRLADLRAGERIAVNEAKTDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EPSWDSPWG GRPGWHIECSAMS H L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPDEPSWDSPWGQGRPGWHIECSAMSTHCLGASFDIHGGGLDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+ WMHNG VT ++EKMSKSLGNF TIR + +Y ++R+F++S HYRSP
Sbjct: 242 SEAATGQRYVTTWMHNGFVTVDDEKMSKSLGNFLTIRDVLAKYDAESVRYFVLSTHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L Y+V +D+A+ A+ +Y L+D ++P N A + + F M
Sbjct: 302 LAYNVDAMDAATSALSRLYTALRD----VAP----------NDAQSEAADAYEARFTDAM 347
Query: 378 SDDLNTSHILTGAFQ 392
+DDLNT + F+
Sbjct: 348 ADDLNTPAAIAVLFE 362
>gi|148653067|ref|YP_001280160.1| cysteinyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
gi|187629854|sp|A5WEW9.1|SYC_PSYWF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148572151|gb|ABQ94210.1| cysteinyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
Length = 505
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/375 (48%), Positives = 242/375 (64%), Gaps = 3/375 (0%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
LKIY+SMT K F P+ GK+GMYVCG+T YD H+GHAR V+FD++ R+L HL E
Sbjct: 24 ALKIYDSMTTNKRSFEPLQAGKIGMYVCGMTVYDYCHIGHARVMVAFDVVSRWLRHLGYE 83
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
V YVRN TD+DDKII RAN+ GE L++R+ + D A L C P +PR ++H+++
Sbjct: 84 VNYVRNITDIDDKIIARANENGEPIGELTHRFIKAMHEDAAALGCENPDAEPRATEHIDE 143
Query: 138 IKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ DMI + AY GDV++AV+ YG+LS ++LE+ +AG RV VD+ K+NP D
Sbjct: 144 MLDMIGTLEQKQHAYAASNGDVYYAVDTFEGYGKLSKRKLEDLQAGSRVDVDTDKKNPFD 203
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAKAGEP W S WG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIA
Sbjct: 204 FVLWKAAKAGEPQWASSWGGGRPGWHIECSAMSTKCLGNSFDIHGGGHDLQFPHHENEIA 263
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA + WMH G + + EKMSKSLGNFFTIR++ +++HP +R F++S+HYRS
Sbjct: 264 QSEAATGCTYAHNWMHVGFINVDGEKMSKSLGNFFTIREVMQKFHPETIRFFILSSHYRS 323
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
+N+S L A + IYQ L+ + L+ ++ I + +F A
Sbjct: 324 QVNFSDAALKEAHSGLTRIYQALKAADAVLNTSVSAAES--IESINAEHAGTHSADFIAA 381
Query: 377 MSDDLNTSHILTGAF 391
M+DD NT ++ F
Sbjct: 382 MNDDFNTPQAISVLF 396
>gi|237747642|ref|ZP_04578122.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
gi|229379004|gb|EEO29095.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
Length = 462
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/379 (49%), Positives = 247/379 (65%), Gaps = 18/379 (4%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L+IYNS+T+ KE+FTPI GKV MYVCG+T YD H+GHAR +SFD++YR+L+ E
Sbjct: 3 SLQIYNSLTRSKEVFTPIEPGKVRMYVCGMTIYDYCHIGHARMMMSFDVVYRWLKATGYE 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKII RA + GE SL++R+ Q D L LPP ++PR ++++ +
Sbjct: 63 VTYVRNITDIDDKIINRAAENGEPISSLTSRFTQYMHEDTCALGILPPDHEPRATEYVPE 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ ++I ++ N AY +GDV ++V YG+LSG+ L++ RAGERV +++ KR+P D
Sbjct: 123 MLELIGKLEKNGLAYQSTDGDVNYSVRDFEGYGKLSGKSLDDLRAGERVDINTGKRDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK+AK EP W S WG GRPGWHIECSAMS+ L FDIHGGG DL FPHHEN
Sbjct: 183 FVLWKSAKPTEPEEAKWPSRWGTGRPGWHIECSAMSSKLLGEHFDIHGGGADLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A V+YWMHNG V +NEKMSKSLGNFFTIR + + Y LR F+I +H
Sbjct: 243 EIAQSEGASHHPFVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVLKSYDAEVLRFFIIRSH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSPLNYS LD A +A+ +Y L+D +V A D ++ F
Sbjct: 303 YRSPLNYSDAHLDDAKNALTRLYTALKDVDV--------------KDQAVDWDSEYAKRF 348
Query: 374 HARMSDDLNTSHILTGAFQ 392
+ M+DD NT + F+
Sbjct: 349 ASAMNDDFNTPEAVAVLFE 367
>gi|416893541|ref|ZP_11924691.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus ATCC 33389]
gi|347813831|gb|EGY30484.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus ATCC 33389]
Length = 469
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 259/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDSLNILRPDFEPRATHHIPEI 131
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 132 IAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 191
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + N EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVNKEKMSKSLGNFFTIRDVLSHYDAESVRYFLLTAHYRSQ 311
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ ++ RD M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGIDKSAVAF-----------GGENFVDAFRDA----M 356
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 357 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MAKANGLAARLRELAGILGL 403
Query: 438 L 438
L
Sbjct: 404 L 404
>gi|350531832|ref|ZP_08910773.1| cysteinyl-tRNA synthetase [Vibrio rotiferianus DAT722]
Length = 460
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/418 (46%), Positives = 260/418 (62%), Gaps = 26/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q LE +AG RV +++ KR+P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLEQLQAGARVDIETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ +++ F A M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLNAAP-----------AGGEEYVSR----FTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+DD NT + F D + +N + K + L L + E+ EV+ IL
Sbjct: 347 NDDFNTPEAYSVLF-DMAREVN---------RLKTENLEKASELGALMRELAEVIGIL 394
>gi|323499496|ref|ZP_08104466.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
gi|323315369|gb|EGA68410.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
Length = 460
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/420 (46%), Positives = 265/420 (63%), Gaps = 30/420 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++++++I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEYIKEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +I AYV + GDV F + K +YG+LS Q L+ +AG RV ++S KR+ DF
Sbjct: 122 IELVETLIERGFAYVADNGDVMFEIAKYDDYGKLSRQDLDQLQAGARVEIESAKRSSLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGTDYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y +L+ ++++ PAA ED + + D
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDISV-------------PAAGGEDYVKRFTDA--- 345
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + + +L + E+ +V+ IL
Sbjct: 346 -MNDDFNTPEAYSVLF-DMAREIN---------RLKTEDVMAASALGALMRELADVIGIL 394
>gi|342904069|ref|ZP_08725871.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
gi|342904629|ref|ZP_08726428.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
gi|341953050|gb|EGT79564.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
gi|341954078|gb|EGT80572.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
Length = 459
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/421 (46%), Positives = 257/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGENFVETFRES----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + IE + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------IEKANGLAARLRELGAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|306819816|ref|ZP_07453471.1| cysteine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304552185|gb|EFM40121.1| cysteine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 466
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/411 (44%), Positives = 265/411 (64%), Gaps = 8/411 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN+MT +KE F I +GKV MY CG T Y+ H+G+AR + FD+L YLE++ EV
Sbjct: 1 MKIYNTMTMKKEEFHEIEKGKVKMYSCGPTVYNYFHIGNARPFIVFDVLRNYLEYIGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTDVDDKII++AN+ G + + ++++Y EY D A + T PRV++++++I
Sbjct: 61 TFVQNFTDVDDKIIKKANEEGISAIEVADKYIDEYYKDAAAIGIRKATVHPRVTENIKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I +I+ AYV+ GDV+F V+K YG+LS + ++ +G R+ V+ +K++P DFA
Sbjct: 121 IGFIQDLIDKGFAYVLGGDVYFEVKKFDEYGKLSHKNIDELISGARIDVNEQKKSPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GE WDSPWG GRPGWHIECS MS YL + DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKEKKEGEIGWDSPWGVGRPGWHIECSVMSNKYLGANIDIHSGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+ +YWMHNG++ +N KMSKSLGNFFT+R + + Y LR F++++HYRSP+
Sbjct: 241 ECKNGCTFANYWMHNGYINIDNVKMSKSLGNFFTVRDVLKVYDGDVLRFFMLTSHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC---INKLRDEFHA 375
NYS LDSA ++ +++C+ +L + + ++ +D + ++ F
Sbjct: 301 NYSKDLLDSAKSSL----DRIKNCKSSLDFSLQKSQDKEVSQEEKDILENVQAIKSTFIE 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 426
+M+DDLNT+ +T F D +K N+S+N K Q LS++ L + N
Sbjct: 357 KMNDDLNTADAITAIF-DLVKLANTSVNENSSKTFVQSILSMLNELTAVLN 406
>gi|403675335|ref|ZP_10937514.1| cysteinyl-tRNA ligase [Acinetobacter sp. NCTC 10304]
Length = 473
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/421 (44%), Positives = 261/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR +TE++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVTEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|220930944|ref|YP_002507852.1| cysteinyl-tRNA synthetase [Halothermothrix orenii H 168]
gi|219992254|gb|ACL68857.1| cysteinyl-tRNA synthetase [Halothermothrix orenii H 168]
Length = 484
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/390 (45%), Positives = 256/390 (65%), Gaps = 6/390 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L++YN+++++KE FTP+ GKV MYVCG+T + +H+GH R+AV++D++ RYLE+ EV
Sbjct: 2 LRVYNTLSRKKEKFTPLETGKVRMYVCGLTVQNYAHIGHIRSAVNYDVIRRYLEYKGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTD+++KI+ RA + G PL L+++Y + YL D+ ++ R +D +++I
Sbjct: 62 TYVQNFTDINEKIVARAREEGLRPLELADKYTKAYLEDIEKMKIKRADVYCRATDTIKEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
M+ ++++ AY V G+V+F+VEK +YG+LSG+ LE +AG RV V+ KR+P DFA
Sbjct: 122 IKMVKKLLDKGYAYEVNGNVYFSVEKFSDYGKLSGRNLEEMQAGARVEVNEEKRHPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK A AGE SWDSPWG G PGWHIECSAMS YL + DIHGGG DLIFPHHENEIAQS
Sbjct: 182 LWKKAPAGEISWDSPWGKGWPGWHIECSAMSIKYLGKRIDIHGGGTDLIFPHHENEIAQS 241
Query: 259 CAACQDSN-VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ + V YW+HNG V EKMSKSLGNFFT+R+I + + P +R+FL++ HYRSP
Sbjct: 242 ESCTGEKPFVKYWLHNGSVNLKGEKMSKSLGNFFTVREILKEFKPDEVRYFLLTKHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI----NKLRDEF 373
++++ ++++A + + T Q L N E+ I NK EF
Sbjct: 302 IDFNFEEVEAARKSWRKLVNTYQVMVQILEKGVITKNKITENTKGENTIISILNKKEKEF 361
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLN 403
M DD NT+ TG + + IN+ +N
Sbjct: 362 EEAMDDDFNTARA-TGVMHELAREINTFVN 390
>gi|85058683|ref|YP_454385.1| cysteinyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
gi|109894945|sp|Q2NV45.1|SYC_SODGM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|84779203|dbj|BAE73980.1| cysteinyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
Length = 457
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/434 (47%), Positives = 256/434 (58%), Gaps = 32/434 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL + EV
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVTRYLRYRGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD++DKIIRRA + GE L+ R E D L L P +PR + +++ I
Sbjct: 62 NYVRNITDIEDKIIRRAAENGETFHQLTERMISEMHSDFDQLNILRPDQEPRATHYIDAI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q+I+ D AYV GDV FAV+ +YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELVGQLIDRDHAYVAANGDVMFAVDSDSDYGLLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DLIFPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNGRQLGHHFDIHGGGSDLIFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+ WMH G V + EKMSKSLGNFFT+R + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNVWMHAGMVMVDREKMSKSLGNFFTVRDVLRYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ G A PA D +F A M
Sbjct: 302 LNYSEENLKQARSALERLYIALR------------GTDATAVPAGGD---HFVAQFIAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK +QP Q ++ +LR++ +LGL
Sbjct: 347 DDDFNTPKAYSVLFD-----IAREVNRLKSEQPAAQGMA--ATLRQLAG-------VLGL 392
Query: 438 L--PPGAYSEVKTA 449
L P A+ + A
Sbjct: 393 LEQEPAAFLQQGAA 406
>gi|262276150|ref|ZP_06053959.1| cysteinyl-tRNA synthetase [Grimontia hollisae CIP 101886]
gi|262219958|gb|EEY71274.1| cysteinyl-tRNA synthetase [Grimontia hollisae CIP 101886]
Length = 461
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/421 (46%), Positives = 258/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTKQKEEFKPIHPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ +L+ R E D L P +PR + ++ +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCEALTERLIGEMYADFDALNMKRPDIEPRATQYIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I+ AYV GDV F V K YG+LS Q LE +AG RV V+ K++P DF
Sbjct: 122 IALVERLIDRGFAYVASNGDVLFEVAKFDEYGKLSRQDLEQLQAGARVDVEEAKKSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGNHFDIHGGGSDLTFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y +L+ + +++ G A + + F A M
Sbjct: 302 LNYSEENLKQARASMERLYTSLRGLDTSVAA---EGGEAFV------------ERFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + + + K+ ++E+ +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REINRLKAED--------VAAASKLAARMRELAEVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|381405378|ref|ZP_09930062.1| cysteinyl-tRNA synthetase [Pantoea sp. Sc1]
gi|380738577|gb|EIB99640.1| cysteinyl-tRNA synthetase [Pantoea sp. Sc1]
Length = 461
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/421 (46%), Positives = 257/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L ++
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ +L+NR E D A L LPP +PR + H+ +I
Sbjct: 62 NYVRNITDIDDKIIKRANENGESIETLTNRMIGEMHNDFAALGILPPDQEPRATRHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P+YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IALVETLIARGHAYVADNGDVMFDVLSDPDYGALSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KA EP+W SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKADEPAWSSPWGNGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 SGCAHDGPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY L+ A A+ +Y L+ E ++ AR F + M
Sbjct: 302 LNYGEDNLNQARAALERLYTALRHTESSVPASGGEAFEAR---------------FRSAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK ++ S + ++++E+ ++LG+
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRLKSEEGA--------SAHGLASKLRELAKVLGI 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|393762614|ref|ZP_10351241.1| cysteinyl-tRNA ligase [Alishewanella agri BL06]
gi|392606849|gb|EIW89733.1| cysteinyl-tRNA ligase [Alishewanella agri BL06]
Length = 459
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/434 (45%), Positives = 264/434 (60%), Gaps = 33/434 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++++QKE+FTPI GKVG+YVCG+T YD H+GHAR V+FD++ RYL +V
Sbjct: 2 LQIYNTLSRQKEVFTPITPGKVGLYVCGITIYDYCHVGHARTYVAFDVINRYLRFCGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + GE+ +L+ R+ Q D L LP +P V+ HM++I
Sbjct: 62 TYVRNITDVDDKIIKRAAENGESCDALTARFTQAMHADFKALGLLPADIEPTVTGHMQEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ Q+++ AY+ +GDV F V K YG LS Q LE +AG RV V K +P DF
Sbjct: 122 ILMVQQLLDKGYAYIAKDGDVLFDVSKYDAYGELSQQNLEMLQAGARVEVSDSKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEP W SPWG GRPGWHIECSAMSA +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKTAKPGEPYWQSPWGNGRPGWHIECSAMSAKHLGAHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+ W+H G V + EKMSKSLGNFFT++++ +Y+ A+R+FL+S+ YRS
Sbjct: 242 STCAHGHKYVNTWIHTGMVQVDKEKMSKSLGNFFTVKEVLAQYNAEAVRYFLLSSQYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEFHAR 376
LNYS L+ A A+ +Y L+D I PA + D N F A
Sbjct: 302 LNYSKENLEQAHAALGRLYNALRD----------------ITPATQVDLNNDYVARFKAA 345
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP-KQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT L F+ + +N K +P K +L+ + ++ + +L
Sbjct: 346 MDDDFNTPEALPVLFE-----LAREVNRFKTTEPAKAAELAAV---------LQTLAGVL 391
Query: 436 GLLPPGAYSEVKTA 449
G+L A + +K+
Sbjct: 392 GILQGDAEAFLKSG 405
>gi|156934911|ref|YP_001438827.1| hypothetical protein ESA_02760 [Cronobacter sakazakii ATCC BAA-894]
gi|156533165|gb|ABU77991.1| hypothetical protein ESA_02760 [Cronobacter sakazakii ATCC BAA-894]
Length = 479
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/352 (51%), Positives = 231/352 (65%), Gaps = 1/352 (0%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
L LKI+N+M++QKE F PI G+VGMYVCG+T YDL H+GH R ++FD++ RYL L
Sbjct: 18 LMLKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGY 77
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
++ YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+
Sbjct: 78 KLKYVRNITDIDDKIIKRANENGEDFVALVDRMVTEMHKDFDALNILRPDSEPRATQHIP 137
Query: 137 QIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+I +++ Q+I AYV GDV FAVE +YG+LS Q LE +AG RV V KRNP
Sbjct: 138 EIIEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRNPM 197
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK +K GEPSW SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEI
Sbjct: 198 DFVLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEI 257
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYR
Sbjct: 258 AQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYR 317
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
S LNYS L A ++ +Y L+ + + + AR A D N
Sbjct: 318 SQLNYSEENLKQARASLERLYTALRGTDASATVAGGEAFEARFVEAMNDDFN 369
>gi|20808681|ref|NP_623852.1| cysteinyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
gi|22257048|sp|Q8R7T3.1|SYC_THETN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|20517317|gb|AAM25456.1| Cysteinyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
Length = 467
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/430 (44%), Positives = 261/430 (60%), Gaps = 18/430 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN+MT+ KE F P+ V MYVCG T Y+ H+G+ARA + FD + RYLE+ V
Sbjct: 1 MRLYNTMTRTKEEFKPLKDKVVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGYTV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTD+DDKII RA + ++ R+ +EY D L T PR ++H++ I
Sbjct: 61 NYVQNFTDIDDKIINRAKEENTTEKEIAERFIEEYFKDADALGIKRATVHPRATEHIDDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I +I+ AYVV+G+V+F K +YG+LS + ++ AG RV +D +K+NP DFA
Sbjct: 121 IEFIKILIDKGYAYVVDGNVYFETAKFKDYGKLSHKNIDELMAGARVEIDEKKKNPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA YWMH G++ NNEKMSKS GNFFT+R++TE+Y P LR F++ AHYRSP+
Sbjct: 241 EAAYDQPFSKYWMHIGYLNVNNEKMSKSKGNFFTVRELTEKYDPEVLRLFMLMAHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHA 375
N+S+ LD A A Y+ L + V L K ++ +D I K + +F
Sbjct: 301 NFSLDLLDQAKSA----YERLSNAVVNLKHLANITKDRELSDEEKDLIVKFDEYKKQFEE 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI----------E 425
M DD NT+ ++ F+ A K N++L+ K+ + L + L + E
Sbjct: 357 AMDDDFNTADAISVLFEMA-KTANANLSGNSSKKLVEYILEMFLKLSDVLGLSYKNAETE 415
Query: 426 NEVKEVLRIL 435
E +E+LR++
Sbjct: 416 IEDEEILRLI 425
>gi|402309177|ref|ZP_10828173.1| cysteine--tRNA ligase [Eubacterium sp. AS15]
gi|400373296|gb|EJP26230.1| cysteine--tRNA ligase [Eubacterium sp. AS15]
Length = 466
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/411 (44%), Positives = 264/411 (64%), Gaps = 8/411 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN+MT +KE F I +GKV MY CG T Y+ H+G+AR + FD+L YLE++ EV
Sbjct: 1 MKIYNTMTMKKEEFHEIEKGKVKMYSCGPTVYNYFHIGNARPFIVFDVLRNYLEYIGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTDVDDKII++AN+ G + + ++++Y EY D + T PRV++++++I
Sbjct: 61 TFVQNFTDVDDKIIKKANEEGISAIEVADKYIDEYYKDATAIGIRKATVHPRVTENIKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I +I+ AYV+ GDV+F V+K YG+LS + ++ +G R+ V+ +K++P DFA
Sbjct: 121 IGFIQVLIDKGFAYVLGGDVYFEVKKFDEYGKLSHKNIDELVSGARIDVNEQKKSPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GE WDSPWG GRPGWHIECS MS YL S DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKEKKEGEIGWDSPWGVGRPGWHIECSVMSNKYLGSNIDIHSGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+ +YWMHNG++ +N KMSKSLGNFFT+R + + Y LR F++++HYRSP+
Sbjct: 241 ECKNGCTFANYWMHNGYINIDNVKMSKSLGNFFTVRDVLKVYDGDVLRFFMLTSHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC---INKLRDEFHA 375
NYS LDSA ++ +++C+ +L + + ++ +D + ++ F
Sbjct: 301 NYSKDLLDSAKSSL----DRIKNCKSSLDFSLQKSQDKEVSQEEKDILENVQAIKSTFIG 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 426
+M+DDLNT+ +T F D +K N+S+N K Q LS++ L + N
Sbjct: 357 KMNDDLNTADAITAIF-DLVKLANTSVNENSSKTFVQSILSMLNELTAVLN 406
>gi|423686370|ref|ZP_17661178.1| cysteinyl-tRNA synthetase [Vibrio fischeri SR5]
gi|371494438|gb|EHN70036.1| cysteinyl-tRNA synthetase [Vibrio fischeri SR5]
Length = 461
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/423 (45%), Positives = 263/423 (62%), Gaps = 31/423 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIYNSLTRQKEEFKPITEGKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRFLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE +L+ R + D L P +PR ++++++I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGETCDALTERLIADMHADFDALNMKRPDVEPRATEYIKEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD--SRKRNPA 195
++ ++I AYV GDV F V+K YGRLS Q LE +AG RV ++ S KR+
Sbjct: 122 VALVERLIERGFAYVASNGDVMFEVKKYDEYGRLSRQDLEQLQAGSRVTLEEASVKRSGM 181
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL+FPHHENEI
Sbjct: 182 DFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLMFPHHENEI 241
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYR
Sbjct: 242 AQSCCAHDTPYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLAHYDSETVRYFLMSGHYR 301
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
S LNYS L+ A ++ +Y +L+ +++++P E+ + + F
Sbjct: 302 SQLNYSEENLNQARASLERLYTSLRGLDLSVTP-----------AGGEEFVGR----FST 346
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F+ A +N LK + I++ K+ ++E+ +L
Sbjct: 347 AMNDDFNTPEAYSVLFEMA-----REVNRLKTEN--------IDTASKLGALMRELADVL 393
Query: 436 GLL 438
GLL
Sbjct: 394 GLL 396
>gi|405373480|ref|ZP_11028253.1| Cysteinyl-tRNA synthetase [Chondromyces apiculatus DSM 436]
gi|397087739|gb|EJJ18769.1| Cysteinyl-tRNA synthetase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 489
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/426 (44%), Positives = 257/426 (60%), Gaps = 21/426 (4%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
++++N+MT QKEL P V G+VG+YVCG T Y H+G+AR SFD++ RYL H +
Sbjct: 5 AIRLFNTMTMQKELLQPAVPGEVGVYVCGPTVYSYIHIGNARTFTSFDVVVRYLRHRGLK 64
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
V YVRNFTDVDDKII+ A + GE P++L+ R+ + + D L L P PRVSDH+ +
Sbjct: 65 VRYVRNFTDVDDKIIKAAAETGEAPVALAARFVELFREDAKALHLLEPDVAPRVSDHLPE 124
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I +I ++++ AY +GDV+F+V +Y +LS + L++ G+RV +KR P DF
Sbjct: 125 IIAIIQKLVDKGHAYASQGDVYFSVSSDADYAKLSKRNLDDLCVGDRVQPGEQKREPLDF 184
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEP+WDSPWGPGRPGWHIECSAMSA YL FDIHGG +DLIFPHHENEIAQ
Sbjct: 185 ALWKAAKPGEPAWDSPWGPGRPGWHIECSAMSAKYLGETFDIHGGALDLIFPHHENEIAQ 244
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S +A + YWMH G + KMSKSLGN +R + P ALR F +S HYR P
Sbjct: 245 SESANGVTFARYWMHCGFLDLEGAKMSKSLGNVVRLRDALTKVDPEALRFFFLSTHYRHP 304
Query: 318 LNYSVLQLDSASDAVFYIYQTLQ--DCEVALSPFQE---HGKTARINPAAEDCINKLRDE 372
L +S L A + Y Y+TL+ D VA F + HG+ R E
Sbjct: 305 LAFSDKALADAEARMEYFYETLRKVDERVAGKDFGKGPLHGEPHRFF-----------GE 353
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F + M DD N++ L +L + +N L K P + + + +L+ + +V+ V
Sbjct: 354 FESAMDDDFNSAGGLG-----SLSGLFGMMNELADKPPVKDKALMGRTLQALREDVRRVS 408
Query: 433 RILGLL 438
+LGL
Sbjct: 409 GVLGLF 414
>gi|410616834|ref|ZP_11327819.1| cysteinyl-tRNA synthetase [Glaciecola polaris LMG 21857]
gi|410163675|dbj|GAC31957.1| cysteinyl-tRNA synthetase [Glaciecola polaris LMG 21857]
Length = 464
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/422 (47%), Positives = 258/422 (61%), Gaps = 22/422 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T+QKELFTP+ KVG+YVCG+T YDLSH+GHAR +SFDL+ R+L H EV
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRFLRHKGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAND E L+ R D A + LPP +PRV+ HM +I
Sbjct: 62 NYVRNITDIDDKIIQRANDNNETTSELTARTIAMMHEDFAAINLLPPDIEPRVTTHMPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++I N AY + GDV F V +YG+LS Q LE G RV VD+ K +P DF
Sbjct: 122 IAIIERLIANGHAYQAKSGDVLFDVSSYRDYGKLSKQDLEQLNMGSRVDVDNDKDDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK+ K GEPSW SPWG GRPGWHIECSAM+ +L FDIHGGG DLIFPHHENE+AQ
Sbjct: 182 VLWKSVKPGEPSWASPWGKGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G V ++EKMSKSLGNFFT+R + +++ LR+FL+SAHYRS
Sbjct: 242 SCCAYNTPYVNYWVHTGMVQVDSEKMSKSLGNFFTLRDVLKQHDSETLRYFLMSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS + A A+ +Y L+D VA + +++ + D + + F M
Sbjct: 302 LSYSEGNITQARSALERLYTALRDV-VA---------SDKVDMQSGDYLVR----FDKAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D + IN K K + +L I + +VL IL
Sbjct: 348 DDDFNTPEAMAVLF-DLARGIN------KAKTEGESGAERASNLAGILLNLGQVLGILQR 400
Query: 438 LP 439
P
Sbjct: 401 SP 402
>gi|260768877|ref|ZP_05877811.1| cysteinyl-tRNA synthetase [Vibrio furnissii CIP 102972]
gi|375131397|ref|YP_004993497.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS) [Vibrio
furnissii NCTC 11218]
gi|260616907|gb|EEX42092.1| cysteinyl-tRNA synthetase [Vibrio furnissii CIP 102972]
gi|315180571|gb|ADT87485.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS) [Vibrio
furnissii NCTC 11218]
Length = 460
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/420 (46%), Positives = 263/420 (62%), Gaps = 30/420 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E+ SL+ R QE D L P +PR + ++++I
Sbjct: 62 TFVRNITDIDDKIIKRAAENQESCESLTERLIQEMYADFDALNIKRPDVEPRATAYIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I+ AYV + GDV F V K +YG+LS Q L+ +AG RV +D KR+P DF
Sbjct: 122 IELVQRLIDRGFAYVADNGDVMFEVNKFDDYGKLSKQDLDQLQAGARVDIDMAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLNHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y +L+ ++ + PAA E+ + + F
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDMTV-------------PAAGGEEYLTR----FTT 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F A +N LK + + +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLFDMA-----REVNRLKTEDTDKAS-----ALGALMRELADVIGIL 394
>gi|251793189|ref|YP_003007917.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
gi|247534584|gb|ACS97830.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
Length = 459
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 258/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 TAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 242 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 302 LNYSEENLNLAHGALERLYTALRGTDKSAVAF-----------GGENFV----DAFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ I LN LK + + + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFE-----IARELNKLKTQD--------MAKANGLAARLRELAAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|83591300|ref|YP_431309.1| cysteinyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
gi|109894909|sp|Q2RFM3.1|SYC_MOOTA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|83574214|gb|ABC20766.1| cysteinyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
Length = 476
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/422 (46%), Positives = 255/422 (60%), Gaps = 10/422 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN++T +KE FTP+ G+V MYVCG T Y+ HLG+AR V FD L RYLE+ +V
Sbjct: 1 MYLYNTLTGRKEEFTPVEPGRVRMYVCGPTTYNYIHLGNARPMVVFDTLRRYLEYRNYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTD+DDK+I RA + + PL ++ RY +E+ D L T PRVS H++ I
Sbjct: 61 LYVQNFTDIDDKVINRAREEHQAPLVIAERYIEEFFKDADALNVKRATLYPRVSQHIDAI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I ++ AYV +GDV+F VEK P YGRLS + RAG RV V++ KRNP DFA
Sbjct: 121 IAAIATLVERGFAYVADGDVYFEVEKFPAYGRLSKRTPGEMRAGARVEVNTSKRNPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAA GEPSW+SPWGPGRPGWHIECS M+ YL FDIHGGG DLIFPHHENEIAQ+
Sbjct: 181 LWKAACPGEPSWESPWGPGRPGWHIECSTMALKYLGPGFDIHGGGADLIFPHHENEIAQA 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + +W+HNG +T N EKMSKS GNFF +R I +R+ PLA+R +L++ HYRSP+
Sbjct: 241 EAQTGCTFARFWLHNGFITVNQEKMSKSKGNFFLVRDILKRFRPLAVRLYLLATHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI----NKLRDEFH 374
++ L +A + + T + A G + PA + +LR EF
Sbjct: 301 DFDDAGLLAAERGLERLENTRRLLGEARCQLTGTGAETTV-PARTSALAGRAEELRQEFI 359
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
+ M DD NT+ L A D + INS LN P + + I E EVL +
Sbjct: 360 SAMDDDFNTARAL-AALYDLAREINSYLNGTTTIDPAALRTAAI----TFEQLGGEVLGL 414
Query: 435 LG 436
G
Sbjct: 415 FG 416
>gi|421808496|ref|ZP_16244343.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC035]
gi|410415644|gb|EKP67429.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC035]
Length = 473
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/421 (44%), Positives = 260/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + N EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEKYVNYWMHVGFINVNGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|398832797|ref|ZP_10590948.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. YR522]
gi|398222691|gb|EJN09059.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. YR522]
Length = 494
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/398 (48%), Positives = 253/398 (63%), Gaps = 20/398 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ + K++F+PI GKV +YVCG+T YD HLGHAR V FD++ R+L + +V
Sbjct: 37 LKIYNTLARDKQIFSPIEPGKVRLYVCGMTVYDFCHLGHARVMVVFDMVQRWLRSVGYDV 96
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA D GE+ L+ R+ D L P ++PR + ++ Q+
Sbjct: 97 TYVRNITDIDDKIIKRALDNGESIRQLTERFIVAMNEDADALGVQRPDHEPRATQYVPQM 156
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++I ++ N AY+ E GDV +AV + P YGRLSG+ L++ RAGERV V++ KR+P DF
Sbjct: 157 LELIGKLQANGLAYLAEDGDVNYAVREFPGYGRLSGKSLDDLRAGERVDVNTGKRDPLDF 216
Query: 198 ALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWKAAK GEP WDS WG GRPGWHIECSAM+ L FDIHGGG DL FPHHENE
Sbjct: 217 VLWKAAKQGEPDEAKWDSAWGCGRPGWHIECSAMAGDLLGEHFDIHGGGQDLQFPHHENE 276
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A + V+YWMHNG V +NEKMSKSLGNFFTIR + ++Y P +R F++ AHY
Sbjct: 277 IAQSEGAHGHAFVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVLQKYDPEVVRFFILRAHY 336
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
RSPLNYS LD A A+ +Y L++ A S + R F
Sbjct: 337 RSPLNYSDAHLDDARQALTRLYTALKEVPPAASGSTDEAPARR---------------FA 381
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 412
M+DD NT L+ F+ A + +N + + +Q +Q
Sbjct: 382 EAMNDDFNTPLALSVLFELANE-VNRTRSADASRQLRQ 418
>gi|164686505|ref|ZP_02210533.1| hypothetical protein CLOBAR_00070 [Clostridium bartlettii DSM
16795]
gi|164604516|gb|EDQ97981.1| cysteine--tRNA ligase [Clostridium bartlettii DSM 16795]
Length = 474
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/412 (43%), Positives = 258/412 (62%), Gaps = 2/412 (0%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +K+YN+++++KE F PI GKV MYVCG T Y+ H+G+AR + FD L RYLE+
Sbjct: 7 IVVKLYNTLSRKKEEFKPIEEGKVKMYVCGPTVYNFIHIGNARPFIIFDTLRRYLEYRGY 66
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+V+NFTDVDDKII+R+++ P ++ +Y +EY VD L + P+V+D++E
Sbjct: 67 DVTFVQNFTDVDDKIIKRSHEENITPEEVATKYIKEYFVDADGLGIKRASVHPQVTDNIE 126
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
QI + ++ + AY V GDV+F +K +YG+LSG + E AG R+ V+ +KR+P D
Sbjct: 127 QIIAFVKELEDKGYAYAVNGDVYFDTKKFKDYGKLSGIKQEELEAGARIEVNDQKRHPMD 186
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKA K GEP W SPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIA
Sbjct: 187 FVLWKAKKEGEPGWASPWGEGRPGWHIECSVMSNRYLGETIDIHAGGQDLKFPHHENEIA 246
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + +YW+HN ++ NNEKMSKSLGNFFT+R+I+E Y +R F++S HYR+
Sbjct: 247 QSEARSGKNFSNYWLHNEYINVNNEKMSKSLGNFFTVREISEIYDLEVVRLFMLSTHYRN 306
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S L+ + + +Y + E ++ E K +D + R +F
Sbjct: 307 PINFSDEILNQSKAGLERLYNAKEKAEFTINNL-EDSKMTEEEAKLQDELASFRQKFIDA 365
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
M DD+NT+ ++ F+ A KF+NS++ K+ Q+ L L + N V
Sbjct: 366 MDDDVNTADAVSAIFELA-KFMNSNITENSSKEFAQKALDEFNELTGVLNIV 416
>gi|145636711|ref|ZP_01792377.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittHH]
gi|145270009|gb|EDK09946.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittHH]
Length = 459
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 257/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLDYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWSSPWGTGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGENFVATFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|345874764|ref|ZP_08826564.1| cysteine--tRNA ligase [Neisseria weaveri LMG 5135]
gi|343970123|gb|EGV38321.1| cysteine--tRNA ligase [Neisseria weaveri LMG 5135]
Length = 470
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/401 (47%), Positives = 251/401 (62%), Gaps = 27/401 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 2 LNIYNTLTRQKEEFIPIDSKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRAQGYPL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + GE L+ R+ + D A L + P +P+ ++H++Q+
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTERFIRAMNEDAAALGVIRPDVEPKATEHVQQM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I+N AY + GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF
Sbjct: 122 LGMIQRLIDNGKAYAADNGDVYYAVREFATYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP+W+SPWG GRPGWHIECSAMS FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWESPWGQGRPGWHIECSAMSEELFGDTFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAA-------------CQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 304
SC A +S+V YW+HNG + +NEKMSKSLGNFFTIR++ E+Y
Sbjct: 242 SCGAHGGSCGHNRSGGKAIESHVKYWLHNGFIRVDNEKMSKSLGNFFTIREVLEKYDAEV 301
Query: 305 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED 364
+R F++ AHYRSPLNYS L+ A A+ +Y L++ +P E +N A D
Sbjct: 302 VRFFILRAHYRSPLNYSDAHLNDAKGALTRLYTALKN-----TPPAEFA----VNENAND 352
Query: 365 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNML 405
+ F A M+DD T + F+ A + ++ N L
Sbjct: 353 YTRR----FFAAMNDDFGTVEAIAVLFELANEVNKTNSNEL 389
>gi|317152040|ref|YP_004120088.1| cysteinyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
gi|316942291|gb|ADU61342.1| cysteinyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
Length = 485
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/444 (43%), Positives = 267/444 (60%), Gaps = 33/444 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++ ++K+ F P V MYVCG+TAYDL H+GHAR++V FD+LYRYL H +V
Sbjct: 1 MRLYNTLARKKQEFVPENGNAVNMYVCGITAYDLCHIGHARSSVVFDVLYRYLRHKGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T++RNFTD+DDKII RAN++G+ +++ ++ E+ VDM L L +P+ ++H+ ++
Sbjct: 61 TFIRNFTDIDDKIINRANEVGKEAAAIAEQFIGEFYVDMDRLGVLRADVEPKCTEHIPEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I D AY GDV+F V YG+LSG+ ++ +G R+ K++P DF
Sbjct: 121 IALTARLIGQDHAYATPSGDVYFRVRSFAGYGKLSGRNIDELESGARIDPGEEKQDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSW+SPWGPGRPGWH+ECSAMS Y DIHGGG DL FPHHENEIAQ
Sbjct: 181 ALWKAAKPGEPSWESPWGPGRPGWHLECSAMSEKYAPLPLDIHGGGQDLSFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA ++W+HNG V N+EKMSKSLGNFFTIR I +++ P LR+FL++ HYRSP
Sbjct: 241 SEAATGKPFANFWVHNGFVQINSEKMSKSLGNFFTIRDILDKFLPETLRYFLLTMHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVAL-------SPFQEHGKTARINPAAEDCINKLR 370
L++S L+ A + IY L + L SPF E TA + D I +
Sbjct: 301 LDFSFDALEEAEKGIRRIYAALAQADAELAKTSWKKSPFPEE-MTAEL-----DAIER-- 352
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK- 429
+ M DD+NT+ L F S L + + + L E R +K
Sbjct: 353 -HWAEAMEDDMNTAGALGHVF---------SAIRLAGRVTEDKTLRKAEGGRDFLLRIKA 402
Query: 430 ------EVLRILGLLPPGAYSEVK 447
EVL I G P G +E++
Sbjct: 403 DMAAWSEVLGIFGRDPAGFLAELR 426
>gi|397169815|ref|ZP_10493244.1| cysteinyl-tRNA synthetase [Alishewanella aestuarii B11]
gi|396088598|gb|EJI86179.1| cysteinyl-tRNA synthetase [Alishewanella aestuarii B11]
Length = 459
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/434 (45%), Positives = 264/434 (60%), Gaps = 33/434 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++++QKE+FTPI GKVG+YVCG+T YD H+GHAR V+FD++ RYL +V
Sbjct: 2 LQIYNTLSRQKEVFTPITPGKVGLYVCGITIYDYCHVGHARTYVAFDVINRYLRFCGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + GE+ +L+ R+ Q D L LP +P V+ HM++I
Sbjct: 62 TYVRNITDVDDKIIKRAAENGESCDALTARFTQAMHADFKALGLLPADIEPTVTGHMQEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ Q+++ AY+ +GDV F V K YG LS Q LE +AG RV V K +P DF
Sbjct: 122 ILMVQQLLDKGYAYIAKDGDVLFDVSKYQAYGALSQQNLEMLQAGARVEVSDSKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEP W SPWG GRPGWHIECSAMSA +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKTAKPGEPYWQSPWGNGRPGWHIECSAMSAKHLGAHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+ W+H G V + EKMSKSLGNFFT++++ +Y+ A+R+FL+S+ YRS
Sbjct: 242 STCAHGHKYVNTWIHTGMVQVDKEKMSKSLGNFFTVKEVLAQYNAEAVRYFLLSSQYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEFHAR 376
LNYS L+ A A+ +Y L+D I PA + D N F A
Sbjct: 302 LNYSKENLEQAHAALGRLYNALRD----------------ITPATQVDLNNDYVARFKAA 345
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP-KQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT L F+ + +N K +P K +L+ + ++ + +L
Sbjct: 346 MDDDFNTPEALPVLFE-----LAREVNRFKTTEPAKAAELAAV---------LQTLAGVL 391
Query: 436 GLLPPGAYSEVKTA 449
G+L A + +K+
Sbjct: 392 GILQGDAEAFLKSG 405
>gi|445492789|ref|ZP_21460635.1| cysteine--tRNA ligase [Acinetobacter baumannii AA-014]
gi|444762993|gb|ELW87339.1| cysteine--tRNA ligase [Acinetobacter baumannii AA-014]
Length = 473
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/421 (44%), Positives = 260/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ ++++EQ+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIEQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGSAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|339483845|ref|YP_004695631.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. Is79A3]
gi|338805990|gb|AEJ02232.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. Is79A3]
Length = 460
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/377 (49%), Positives = 240/377 (63%), Gaps = 14/377 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+ ++K+ F PI+ GKV +YVCG+T YD HLGHAR V FD + R+ + +V
Sbjct: 2 LKIYNSIAREKQDFVPIIPGKVKIYVCGMTVYDYCHLGHARVLVVFDTVIRWFKANDFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+YVRN TD+DDKII+RA + E+ +L+ R+ Q D + L PTY+PR +D++E +
Sbjct: 62 SYVRNITDIDDKIIKRAQENNESIGTLTQRFIQAMNEDSSALGVSSPTYEPRATDYVENM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I D AY GDV++AV P+YG+LSG+ L + RAGERV +DS K++P DF
Sbjct: 122 IGMIGTLIEKDLAYRASNGDVYYAVHNFPSYGQLSGKSLNDLRAGERVEIDSNKKDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK+AK GEP W+SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKSAKPGEPFWESPWGRGRPGWHIECSAMSEQLLGVHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMHNG V +NEKMSKSLGNFFT+R+I + Y P +R F++ A YRSP
Sbjct: 242 SEGAHDHPFVNYWMHNGFVRVDNEKMSKSLGNFFTVREILKHYQPEVVRFFILRAQYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A+ +Y L++ + I+ A D N F M
Sbjct: 302 LNYSDQHLKDTKLALDRLYIALKEVKP-------------IDMPAIDWNNLHAQRFKTAM 348
Query: 378 SDDLNTSHILTGAFQDA 394
DD NT + F+ A
Sbjct: 349 EDDFNTPEAIAVLFELA 365
>gi|375111151|ref|ZP_09757362.1| cysteinyl-tRNA synthetase [Alishewanella jeotgali KCTC 22429]
gi|374568693|gb|EHR39865.1| cysteinyl-tRNA synthetase [Alishewanella jeotgali KCTC 22429]
Length = 459
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/434 (45%), Positives = 264/434 (60%), Gaps = 33/434 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++++QKE+FTPI GKVG+YVCG+T YD H+GHAR V+FD++ RYL +V
Sbjct: 2 LQIYNTLSRQKEVFTPITPGKVGLYVCGITIYDYCHVGHARTYVAFDVINRYLRFCGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + GE+ +L+ R+ Q D L LP +P V+ HM++I
Sbjct: 62 TYVRNITDVDDKIIKRAAENGESCDALTARFTQAMHADFNALGLLPADIEPTVTGHMQEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ Q+++ AY+ +GDV F V K YG LS Q LE +AG RV V K +P DF
Sbjct: 122 ILMVQQLLDKGYAYIAKDGDVLFDVSKYQAYGALSQQNLEMLQAGARVEVSDSKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEP W SPWG GRPGWHIECSAMSA +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKTAKPGEPYWQSPWGNGRPGWHIECSAMSAKHLGAHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+ W+H G V + EKMSKSLGNFFT++++ +Y+ A+R+FL+S+ YRS
Sbjct: 242 STCAHGHKYVNTWIHTGMVQVDKEKMSKSLGNFFTVKEVLAQYNAEAVRYFLLSSQYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEFHAR 376
LNYS L+ A A+ +Y L+D I PA + D N F A
Sbjct: 302 LNYSKENLEQAHAALGRLYNALRD----------------ITPATQVDLNNDYVTRFKAA 345
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP-KQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT L F+ + +N K +P K +L+ + ++ + +L
Sbjct: 346 MDDDFNTPEALPVLFE-----LAREVNRFKTTEPAKAAELAAV---------LQTLAGVL 391
Query: 436 GLLPPGAYSEVKTA 449
G+L A + +K+
Sbjct: 392 GILQGDAEAFLKSG 405
>gi|283834167|ref|ZP_06353908.1| cysteine--tRNA ligase [Citrobacter youngae ATCC 29220]
gi|291070317|gb|EFE08426.1| cysteine--tRNA ligase [Citrobacter youngae ATCC 29220]
Length = 461
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/350 (52%), Positives = 232/350 (66%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHSDFDALNILRPDLEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG+LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + +++P AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSVAPAGGEAFEARFIEAMDDDFN 351
>gi|220904715|ref|YP_002480027.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254781675|sp|B8J0S2.1|SYC_DESDA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|219869014|gb|ACL49349.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 483
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/383 (48%), Positives = 244/383 (63%), Gaps = 6/383 (1%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YN++ +QKE FTP+ GKV MYVCG+TAYD H+GHAR+A+ FD+L R L H+ +VT+
Sbjct: 3 LYNTLGRQKEEFTPLRPGKVHMYVCGITAYDYCHIGHARSALVFDVLVRQLRHMGLDVTF 62
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRNFTDVDDKII RAN G + ++ Y + DM L +PR +DH+++I+D
Sbjct: 63 VRNFTDVDDKIINRANKEGLDWREVAQTYINAFYEDMDRLGVQRADVEPRATDHIQEIQD 122
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
+ +++ AY GDV+F V P YG+LSG+ L+ +G RVA K +P DFAL
Sbjct: 123 LCAKLVAEGKAYATTSGDVYFRVRSYPPYGKLSGRSLDELLSGARVAPGEEKEDPLDFAL 182
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAK GEPSW+SPWGPGRPGWHIECSAMS YL DIHGGG DL+FPHHENEIAQ+
Sbjct: 183 WKAAKPGEPSWESPWGPGRPGWHIECSAMSESYLP--LDIHGGGQDLVFPHHENEIAQTE 240
Query: 260 AACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLN 319
A C YW+HNG V N EKMSKSLGNF TIR I E Y P LR FL+ HYRSP++
Sbjct: 241 AVCHCHLARYWVHNGFVQVNAEKMSKSLGNFKTIRDILESYLPETLRFFLLGKHYRSPID 300
Query: 320 YSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSD 379
++ +D A A+ +Y L + + AL+ +E K + + + + M+D
Sbjct: 301 FTAEGMDEAEKALHRVYTALLETQKALT--REKWKKSPLPAQLTEDWAAQAEALDEAMND 358
Query: 380 DLNTSHILTGAFQDALKFINSSL 402
DLNT+ L F ++ +N L
Sbjct: 359 DLNTAQALGHIFTQ-VRLVNRLL 380
>gi|422336724|ref|ZP_16417697.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus F0387]
gi|353346036|gb|EHB90323.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus F0387]
Length = 459
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 259/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 TAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 242 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ ++ RD M
Sbjct: 302 LNYSEENLNLAHGALERLYTALRGTDKSAVAF-----------GGENFVDAFRDA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MAKANGLAARLRELAGILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|308185969|ref|YP_003930100.1| cysteinyl-tRNA synthetase [Pantoea vagans C9-1]
gi|308056479|gb|ADO08651.1| Cysteinyl-tRNA synthetase [Pantoea vagans C9-1]
Length = 500
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/421 (46%), Positives = 257/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L ++
Sbjct: 41 LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYQL 100
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ +L+NR E D A L LPP +PR + H+ +I
Sbjct: 101 NYVRNITDIDDKIIKRANENGESIETLTNRMIGEMHNDFAALGILPPDEEPRATRHIAEI 160
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +I + AYV + GDV F V +YG LS Q LE +AG RV V KRNP DF
Sbjct: 161 IELVQTLIARNHAYVADNGDVMFDVLSDTDYGALSRQDLEQLQAGARVEVADVKRNPMDF 220
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KA EP+W SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 221 VLWKMSKADEPAWSSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 280
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 281 SSCAHDGPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 340
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY L+ A A+ +Y L+ + S + HG A F + M
Sbjct: 341 LNYGEDNLNQARAALERLYTALRHTD---SSVKAHGGEA------------FEARFRSAM 385
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + S + ++++E+ +LG+
Sbjct: 386 DDDFNTPEAYSVLFDMA-----REVNRLKSEDGA--------SAHGLASKLREMANVLGI 432
Query: 438 L 438
L
Sbjct: 433 L 433
>gi|359440396|ref|ZP_09230316.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20429]
gi|359456073|ref|ZP_09245267.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20495]
gi|392534096|ref|ZP_10281233.1| cysteinyl-tRNA ligase [Pseudoalteromonas arctica A 37-1-2]
gi|358037709|dbj|GAA66565.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20429]
gi|358046880|dbj|GAA81516.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20495]
Length = 459
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/410 (47%), Positives = 248/410 (60%), Gaps = 24/410 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ IYN++T+QKE F P+V GK+ MYVCG+T YD H+GHAR V FD++ RYL H+ ++
Sbjct: 2 VNIYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ L+ R + D L L P +P V+ HM++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESINDLTVRMTKAMHEDFDSLNMLRPDIEPTVTSHMDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I AYV +GDV F V YG LS Q L ++G RV V K +P DF
Sbjct: 122 IVMVKRLIEKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSL NFFT+R++ + Y P ++R+FLIS HYRS
Sbjct: 242 SCCANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKAYDPESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A ++ IY L+D E + N+ +F M
Sbjct: 302 LNYSQENLDQARSSLERIYTALRDVEPVECDLEG---------------NEFVAKFRKAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ-QLSLIESLRKIEN 426
+DD NT L F+ + LN +K+ Q QL+ I LR I N
Sbjct: 347 NDDFNTPEALPVLFE-----LAKELNRVKESDAVQAGQLAFI--LRSIGN 389
>gi|376297517|ref|YP_005168747.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
gi|323460079|gb|EGB15944.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
Length = 485
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/379 (46%), Positives = 249/379 (65%), Gaps = 13/379 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++ ++KE FTP V MYVCG+TAYDL H+GHAR++V FD+LYRYL+H +V
Sbjct: 1 MRLYNTLKRRKEEFTPAHNNDVNMYVCGITAYDLCHIGHARSSVVFDVLYRYLKHEGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
++RNFTD+DDKII+RAN++G+ ++ ++ E+ VDM L P+ +P+ ++H+ ++
Sbjct: 61 NFIRNFTDIDDKIIKRANEVGKEASEIAEKFIGEFYVDMDRLNIERPSVEPKCTEHIPEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I+ AY GDV+F V YG+LSG+ ++ +G R+A K +P DF
Sbjct: 121 IALTQRLIDKGHAYATPSGDVYFKVRSFEGYGKLSGRNIDELESGARIAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEP W+SPWG GRPGWH+ECSAMS Y DIHGGG DL FPHHENE+AQ
Sbjct: 181 ALWKAAKPGEPFWESPWGKGRPGWHLECSAMSEKYADLPLDIHGGGQDLAFPHHENEVAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +YW+HNG V N+EKMSKSLGNFFTIR I ++ P LR+FL++ HYRSP
Sbjct: 241 SEAATGKPFANYWVHNGFVQINSEKMSKSLGNFFTIRDILAKFLPETLRYFLLTMHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQ--DCEVALSPFQEHGKTARINPAAEDCINKLRD---E 372
L++S L+ A + IY L D E+A +++ +P E+ + +L D
Sbjct: 301 LDFSFDALEEAEKGLKRIYSALNQIDEELARDKWKK-------SPFPEELVKELDDLEKH 353
Query: 373 FHARMSDDLNTSHILTGAF 391
F M+DDLNT+ L F
Sbjct: 354 FAEAMADDLNTAGALGHVF 372
>gi|163801179|ref|ZP_02195079.1| cysteinyl-tRNA synthetase [Vibrio sp. AND4]
gi|159175528|gb|EDP60325.1| cysteinyl-tRNA synthetase [Vibrio sp. AND4]
Length = 460
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/421 (45%), Positives = 262/421 (62%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL++R E VD L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTDRLIGEMHVDFDSLNMKRPDVEPRATQFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V + YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVRQFKEYGKLSKQDLDQLQAGARVDIETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ + +P E+ + + F A M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDSNAAP-----------AGGEEYVTR----FTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +E ++ ++E+ ++G+
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKTEN--------VEKASELGALMRELADVIGI 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|431792448|ref|YP_007219353.1| cysteinyl-tRNA synthetase [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430782674|gb|AGA67957.1| cysteinyl-tRNA synthetase [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 477
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/392 (46%), Positives = 250/392 (63%), Gaps = 16/392 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L+++N+M+ QKE F P +GKV MY CG T Y+ H+G+ R V FD++ RYL +
Sbjct: 1 MPLRLFNTMSHQKEEFKPREKGKVAMYTCGPTVYNYFHVGNGRMLVVFDMIRRYLMYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+V+NFTD+DDKII R N+ G +PL L+ +Y +EY D L + T P+ +DH+
Sbjct: 61 DVTFVQNFTDIDDKIINRGNEEGIDPLELAQKYIEEYFKDAKALNLMTATIHPKATDHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ ++I + + AY VEGDV+FAV+K P+YG+LSG+ E+ +AG RV V+ RK NP D
Sbjct: 121 EMIEIIKGLEESGLAYAVEGDVYFAVDKLPDYGKLSGRNFEDMQAGARVEVEERKHNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+AK GEP W+SPWG GRPGWHIEC+AMS YL + FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKSAKPGEPFWESPWGKGRPGWHIECTAMSLKYLGAGFDIHGGGGDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
QS + YWMHN +T N +KMSKSLGNFFT+R+I E + +R +L+ HYR
Sbjct: 241 QSEGYLHGETFARYWMHNAFLTINQQKMSKSLGNFFTVREILEHFSGEVIRFYLLGTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL------ 369
SPL++ L A + + +++ + AL HG+ PA E KL
Sbjct: 301 SPLDFDDENLQMAQKGLERLQTSIRLADEALG---RHGE----KPADEANDQKLIAAAEE 353
Query: 370 -RDEFHARMSDDLNTSHILTGAFQDALKFINS 400
+ EF + M DD N++ F+ K IN+
Sbjct: 354 AQREFESAMDDDFNSALAYASLFELG-KVINA 384
>gi|184157544|ref|YP_001845883.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ACICU]
gi|332874278|ref|ZP_08442197.1| cysteine--tRNA ligase [Acinetobacter baumannii 6014059]
gi|384131638|ref|YP_005514250.1| cysS [Acinetobacter baumannii 1656-2]
gi|385236958|ref|YP_005798297.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|387124491|ref|YP_006290373.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-TJ]
gi|407932282|ref|YP_006847925.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TYTH-1]
gi|417869475|ref|ZP_12514460.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH1]
gi|417872928|ref|ZP_12517811.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH2]
gi|417878946|ref|ZP_12523538.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH3]
gi|417881912|ref|ZP_12526221.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH4]
gi|421203711|ref|ZP_15660846.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AC12]
gi|421533834|ref|ZP_15980114.1| cysteine--tRNA ligase [Acinetobacter baumannii AC30]
gi|421629211|ref|ZP_16069951.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC180]
gi|421687025|ref|ZP_16126761.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-143]
gi|421703081|ref|ZP_16142548.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1122]
gi|421706801|ref|ZP_16146204.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1219]
gi|421790903|ref|ZP_16227093.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-2]
gi|424052919|ref|ZP_17790451.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab11111]
gi|424064410|ref|ZP_17801895.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab44444]
gi|425755223|ref|ZP_18873045.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-113]
gi|445464068|ref|ZP_21449451.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC338]
gi|445481109|ref|ZP_21455771.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-78]
gi|187631665|sp|A3M419.2|SYC_ACIBT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558609|sp|B2HX34.1|SYC_ACIBC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|183209138|gb|ACC56536.1| Cysteinyl-tRNA synthetase [Acinetobacter baumannii ACICU]
gi|193076930|gb|ABO11663.2| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
gi|322507858|gb|ADX03312.1| cysS [Acinetobacter baumannii 1656-2]
gi|323517455|gb|ADX91836.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|332737503|gb|EGJ68411.1| cysteine--tRNA ligase [Acinetobacter baumannii 6014059]
gi|342230338|gb|EGT95178.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH1]
gi|342230714|gb|EGT95540.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH3]
gi|342232733|gb|EGT97504.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH2]
gi|342238444|gb|EGU02876.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH4]
gi|385878983|gb|AFI96078.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-TJ]
gi|398326755|gb|EJN42898.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AC12]
gi|404566489|gb|EKA71635.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-143]
gi|404670997|gb|EKB38866.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab11111]
gi|404673146|gb|EKB40945.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab44444]
gi|407192917|gb|EKE64090.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1122]
gi|407193200|gb|EKE64368.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1219]
gi|407900863|gb|AFU37694.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TYTH-1]
gi|408702925|gb|EKL48332.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC180]
gi|409988287|gb|EKO44460.1| cysteine--tRNA ligase [Acinetobacter baumannii AC30]
gi|410404321|gb|EKP56389.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-2]
gi|425495265|gb|EKU61454.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-113]
gi|444770795|gb|ELW94937.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-78]
gi|444779964|gb|ELX03936.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC338]
Length = 473
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/421 (44%), Positives = 260/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++LE+ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|260582005|ref|ZP_05849800.1| cysteinyl-tRNA synthetase [Haemophilus influenzae NT127]
gi|260094895|gb|EEW78788.1| cysteinyl-tRNA synthetase [Haemophilus influenzae NT127]
Length = 459
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 257/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGADQSAVAF-----------GGENFVETFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKAED--------VEKANGLAARLRELGAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|150402240|ref|YP_001329534.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C7]
gi|166200151|sp|A6VG07.1|SYC_METM7 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|150033270|gb|ABR65383.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C7]
Length = 476
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/388 (45%), Positives = 242/388 (62%), Gaps = 1/388 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YN++T+++E F P+ +V MYVCG T YD +HLGH R VSFD++ RYLEH+ V
Sbjct: 2 LKVYNTLTRKEEEFKPLNENEVKMYVCGPTVYDHTHLGHGRTYVSFDIIRRYLEHIGYTV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
V NFTD+DDKII+R+ + G+NP LS + +L DMA L+ P P+V++H+ +I
Sbjct: 62 NLVINFTDIDDKIIKRSQEKGKNPKELSETFVNVFLNDMATLKVKPADIYPKVTEHIPEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I ++I AY E V+F V+K NYG+LS LE+ +G R+ K+NP DFA
Sbjct: 122 IAFIEKLIEKGFAYKTENGVYFEVKKFENYGKLSNINLEDLISGARIEPSDEKKNPEDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP W+SP+G GRPGWHIECSAMS+ YL +FDIHGGG DL FPHHENEIAQS
Sbjct: 182 LWKTAKPGEPKWESPFGEGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V+YW+H G V N EKMSKSLGNF TI I++ Y P LR F I HYRSP+
Sbjct: 242 VAYSGKDWVNYWLHTGFVMVNGEKMSKSLGNFITIEDISKEYDPEILRFFFIQRHYRSPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
+Y+ + + + IY +++ ++L ++ G D + + F+ M+
Sbjct: 302 DYTAESMSHVKNNLEKIYNVIENIRISLEKSEKSGIWNENEFLLYDILKNSKHNFYEAMN 361
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLK 406
D NT L F+ + +N L+++K
Sbjct: 362 SDFNTVEALKSVFEVS-NGVNKYLSLVK 388
>gi|237730496|ref|ZP_04560977.1| cysteinyl-tRNA synthetase [Citrobacter sp. 30_2]
gi|365105048|ref|ZP_09334440.1| cysteinyl-tRNA synthetase [Citrobacter freundii 4_7_47CFAA]
gi|395231060|ref|ZP_10409357.1| cysteinyl-tRNA synthetase [Citrobacter sp. A1]
gi|424731036|ref|ZP_18159624.1| cysteinyl-trna synthetase [Citrobacter sp. L17]
gi|226906035|gb|EEH91953.1| cysteinyl-tRNA synthetase [Citrobacter sp. 30_2]
gi|363643989|gb|EHL83293.1| cysteinyl-tRNA synthetase [Citrobacter freundii 4_7_47CFAA]
gi|394715181|gb|EJF21015.1| cysteinyl-tRNA synthetase [Citrobacter sp. A1]
gi|422894446|gb|EKU34258.1| cysteinyl-trna synthetase [Citrobacter sp. L17]
gi|455641712|gb|EMF20883.1| cysteinyl-tRNA synthetase [Citrobacter freundii GTC 09479]
Length = 461
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/350 (52%), Positives = 232/350 (66%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHSDFDALNILRPDLEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG+LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + +++P AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSVAPAGGEAFEARFIEAMDDDFN 351
>gi|338999452|ref|ZP_08638095.1| cysteinyl-tRNA synthetase [Halomonas sp. TD01]
gi|338763601|gb|EGP18590.1| cysteinyl-tRNA synthetase [Halomonas sp. TD01]
Length = 463
Score = 370 bits (949), Expect = e-99, Method: Compositional matrix adjust.
Identities = 194/422 (45%), Positives = 253/422 (59%), Gaps = 30/422 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ IYN++T++KE FTP+V GKV MYVCG+T YD HLGHAR V+FD++ RYL + +V
Sbjct: 1 MHIYNTLTRRKEPFTPLVAGKVSMYVCGMTVYDYCHLGHARVMVAFDVITRYLRYRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKI++RA + GE+ +L+ R Q D A L LPP+++PR + H+ I
Sbjct: 61 TYVRNITDIDDKILKRAEENGESISALTERMIQAMHEDEARLSVLPPSHEPRATGHIGDI 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I D AY GDV++ V K +YG+L+ ++L++ R+G RV VD K +P DF
Sbjct: 121 VAMIQTLIEKDFAYAAANGDVYYRVRKFADYGKLNNRQLDDMRSGARVEVDVHKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GE W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 181 VLWKAAKPGEAHWHSPWGNGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+ WMH G V N EKMSKSLGNFFTIR + + P +R L+++HYRSP
Sbjct: 241 SEAATGKTYVNTWMHAGAVRVNQEKMSKSLGNFFTIRDVLAEHDPEVVRFLLVASHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEV-ALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
+NYSV L A ++ Y L+ EV + E G R A
Sbjct: 301 INYSVDSLHEARKSLTRFYTALEGVEVLSGGGGDETGYAERFTTA--------------- 345
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD N+ L F + LN K + ++ Q + +E+ + +LG
Sbjct: 346 MDDDFNSPEALAVLFD-----LARDLNRAKSESSEKAQ--------HLASELTRLAGVLG 392
Query: 437 LL 438
LL
Sbjct: 393 LL 394
>gi|416052811|ref|ZP_11578446.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|347991603|gb|EGY33066.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
Length = 469
Score = 370 bits (949), Expect = e-99, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 258/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 12 LQLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRIVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 132 IDIVQKLIQRRHAYVADNGDVMFDVESFKGYGKLSRQDLEQLQAGARIEINEIKKNPMDF 191
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNGKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLSHYDAESVRYFLLTAHYRSQ 311
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGTDKSAVAF-----------GGENFV----DTFREAM 356
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 357 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MAKANGLAARLRELAAILGL 403
Query: 438 L 438
L
Sbjct: 404 L 404
>gi|254229902|ref|ZP_04923306.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262394608|ref|YP_003286462.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|451970383|ref|ZP_21923610.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus E0666]
gi|151937606|gb|EDN56460.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262338202|gb|ACY51997.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|451933897|gb|EMD81564.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus E0666]
Length = 460
Score = 370 bits (949), Expect = e-99, Method: Compositional matrix adjust.
Identities = 193/418 (46%), Positives = 259/418 (61%), Gaps = 26/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDIEPRATQFIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV V++ KR+P DF
Sbjct: 122 IELVQKLIERGFAYVADNGDVMFEVRKFDEYGKLSKQDLDQLQAGARVDVETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ +++ F A M
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDLNAAP-----------AGGEEYVSR----FTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+DD NT + F D + +N + K + L L + E+ +V+ IL
Sbjct: 347 NDDFNTPEAYSVLF-DMAREVN---------RLKTENLEKASELGALMRELADVIGIL 394
>gi|419845824|ref|ZP_14369087.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK2019]
gi|386414862|gb|EIJ29404.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK2019]
Length = 477
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 257/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI GKVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 20 LKIFNTLTREKEVFKPIHEGKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 79
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 80 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 139
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q L+ +AG R+ ++ K+NP DF
Sbjct: 140 IEIVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLDQLQAGARIEINEIKKNPMDF 199
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 200 VLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 259
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 260 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 319
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 320 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGENFV----DAFREAM 364
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + E + ++E+ +LGL
Sbjct: 365 DDDFNTPNALSVLFEMA-----REINKLKTEYA--------EKANGLAARLRELAGVLGL 411
Query: 438 L 438
L
Sbjct: 412 L 412
>gi|229846997|ref|ZP_04467103.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
gi|229810081|gb|EEP45801.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
Length = 459
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 257/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVVF-----------GGENFVETFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKAED--------VEKANGLAARLRELGAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|424659553|ref|ZP_18096802.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-16]
gi|408052108|gb|EKG87167.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-16]
Length = 459
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 197/420 (46%), Positives = 261/420 (62%), Gaps = 30/420 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENEETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V + YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA ED + + F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEDYVTR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + ++ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDMTNASALGSLMRELADVIGIL 394
>gi|242280816|ref|YP_002992945.1| cysteinyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
gi|259511828|sp|C6BS23.1|SYC_DESAD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|242123710|gb|ACS81406.1| cysteinyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
Length = 485
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 189/438 (43%), Positives = 265/438 (60%), Gaps = 13/438 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++ ++KE F P+ KV +Y CG+TAYDL H+GHAR++V FD+L RYL +V
Sbjct: 1 MRLYNTLNRKKEEFVPLNGNKVNLYACGITAYDLCHIGHARSSVVFDILVRYLRFKGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTD+DDKII RAN+ G L+ ++ E+ VDM L L +P+ ++H+ ++
Sbjct: 61 TFVRNFTDIDDKIINRANETGVTSTELAEKFIGEFYVDMDKLNILRADIEPKCTEHIPEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I D AY GDV+F V +YG+LSG+ +E+ ++G R+ K++P DF
Sbjct: 121 IELTQTLIEKDHAYATPSGDVYFKVRSFDDYGKLSGRNIEDLQSGARIQPGEEKQDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSW+SPWG GRPGWH+ECSAMS Y FDIHGGG DL FPHHENEIAQ
Sbjct: 181 ALWKAAKPGEPSWESPWGQGRPGWHLECSAMSEKYFELPFDIHGGGQDLSFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +W+HNG V N+EKMSKSLGNFFTIR I +++ P LR+FL++ HYRSP
Sbjct: 241 SEAATGKEMARFWVHNGFVQINSEKMSKSLGNFFTIRDILDKFMPETLRYFLLTMHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVAL--SPFQEHGKTARINPAAEDCINKLRDEFHA 375
L++S L+ A + +Y L+ AL S + + + ED D
Sbjct: 301 LDFSFEALEEAEKGIRRVYSALEQTAEALNKSKWSKAALPEEVLAEIEDAEKGWADA--- 357
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK--EVLR 433
M DD+NT+ GA I + + ++K ++ + +R +E+ K EVL
Sbjct: 358 -MEDDMNTA----GAMGHMFTLIRLAGRIGEEKSWRKSEGGRDAWIRILEDMKKWGEVLG 412
Query: 434 ILGLLPPGAYSEVKTAFL 451
I P E+K L
Sbjct: 413 IFTRDPKEFLEELKLCML 430
>gi|319775019|ref|YP_004137507.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3047]
gi|329123076|ref|ZP_08251646.1| cysteine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
gi|317449610|emb|CBY85816.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3047]
gi|327471631|gb|EGF17073.1| cysteine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
Length = 459
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 257/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGSRIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVVF-----------GGENFVETFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|94676564|ref|YP_588592.1| cysteinyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|123081502|sp|Q1LTX2.1|SYC_BAUCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|94219714|gb|ABF13873.1| cysteinyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 462
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/421 (46%), Positives = 258/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L I+N++T +KE+F PI GKV +YVCGVTAYDL H+GH R V+FD++ RYL + EV
Sbjct: 2 LAIFNTLTNKKEIFKPIHIGKVALYVCGVTAYDLCHIGHVRTFVTFDVVIRYLRYCGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y+RN TD++DKIIR+A + GE+ L++R E D+ L L P +PR + H+++I
Sbjct: 62 NYIRNITDIEDKIIRKAANNGESCQQLTDRMIAEMHHDLDLLNILRPDKEPRATQHIKEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ Q+I+ + AY+ GDV FA+E + NYG LS Q L + G+RV + + KRNP DF
Sbjct: 122 IQLTRQLIDKEHAYIASNGDVMFAIESANNYGILSSQNLNQLQIGQRVKITTVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W SPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIAQ
Sbjct: 182 VLWKMSKHGEPTWSSPWGNGRPGWHIECSAMSIKYLGKHFDIHGGGSDLIFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S + V++WMH+G VT NEKMSKSL NFFT+R + + Y +R+FLIS+HYR P
Sbjct: 242 STCMENNPYVNFWMHSGMVTICNEKMSKSLSNFFTVRDVLKYYDAETVRYFLISSHYRKP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L++ + + P E I ++F M
Sbjct: 302 LNYSEKSLQLARTALKSLYIALRNTKKEVIP-----------SGGEYFI----EQFMMAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
++D NT FQ A +N LK K K Q + +LR + N ILGL
Sbjct: 347 NNDFNTPAAHAVLFQLA-----HEVNRLKTKNIKSAQ-GMAATLRYLAN-------ILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|417842975|ref|ZP_12489052.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21127]
gi|341950209|gb|EGT76798.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21127]
Length = 459
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 257/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGENFVATFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|417568294|ref|ZP_12219157.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC189]
gi|417578880|ref|ZP_12229713.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-17]
gi|395554589|gb|EJG20591.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC189]
gi|395568018|gb|EJG28692.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-17]
Length = 477
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 188/421 (44%), Positives = 260/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 10 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 69
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 70 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 129
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++LE+ +AG ERV V+ K++P DF
Sbjct: 130 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 189
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 190 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 249
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 250 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 309
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 310 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 359 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 406
Query: 438 L 438
+
Sbjct: 407 V 407
>gi|317047240|ref|YP_004114888.1| cysteinyl-tRNA synthetase [Pantoea sp. At-9b]
gi|316948857|gb|ADU68332.1| cysteinyl-tRNA synthetase [Pantoea sp. At-9b]
Length = 461
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 197/465 (42%), Positives = 272/465 (58%), Gaps = 34/465 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI G++GMYVCG+T YDL H+GH R V+FD++ RYL ++ ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHAGEIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYVGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ +L+NR E D A L LPP +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESIETLTNRMIGEMHKDFAALGILPPDLEPRATRHIDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V +YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELVGRLIERGHAYVADNGDVMFDVLSDKDYGVLSRQDLEQLQAGARVEVAEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KA EP+W+SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 VLWKMSKADEPAWNSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK--------- 368
LNY L+ A A+ +Y L+ +V+ AR A +D N
Sbjct: 302 LNYGEDNLNQARAALERLYTALRHTDVSAVAAGGEEFEARFRTAMDDDFNTPEAYSVLFD 361
Query: 369 LRDEFHARMSDDLNTSHILTGAF-----------QDALKFINSSLNMLKKKQPKQQQLSL 417
+ E + ++D + L QD +F+ S Q +++
Sbjct: 362 MAREVNRLKTEDKTAADALAAKLRQLAEVLGILQQDPEQFLQSG------AQANDDEVAE 415
Query: 418 IESLRKIENEVKEVLRILGLLPPGAYSEVKTAFLVLLHVFFDDSP 462
IE+L K+ N+ ++ A ++V L L + +D P
Sbjct: 416 IEALIKMRNDARQA-------KDWAQADVARDKLNALGIVLEDGP 453
>gi|255318181|ref|ZP_05359420.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262379610|ref|ZP_06072766.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
gi|255304727|gb|EET83905.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262299067|gb|EEY86980.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
Length = 473
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 189/422 (44%), Positives = 265/422 (62%), Gaps = 28/422 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L EV Y
Sbjct: 6 LYNSEQRKKVEFVPRKAGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWEVKY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII+RAN+ GE +L++R+ Q D L CL P PR +++++Q+++
Sbjct: 66 VRNITDIDDKIIKRANENGETIQALTDRFIQAMNEDAHRLGCLAPDEAPRATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++++N AY GDV+F VE+ YGRLSG++L++ +AG +RV V+ K++P DF
Sbjct: 126 MIGKLVDNGSAYPATNGDVYFQVEQFNKYGRLSGRKLDDMQAGASDRVDVEVDKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP W+SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPFWNSPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEAATGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLR-DEFHAR 376
+N+S + L A A+ Y A +Q+ + N D +++ + F+A
Sbjct: 306 VNFSDVALKEAKTALTRFYH-------AFKAYQQ-----QFNEELTDHFSQIHLERFNAA 353
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ + F+ + LN K++ +Q +LR + N ILG
Sbjct: 354 MCDDFNTAEAMAVLFE-----LAKELNRALKEENAEQAKVFYSTLRHLTN-------ILG 401
Query: 437 LL 438
L+
Sbjct: 402 LV 403
>gi|298528309|ref|ZP_07015713.1| cysteinyl-tRNA synthetase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511961|gb|EFI35863.1| cysteinyl-tRNA synthetase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 485
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 186/419 (44%), Positives = 257/419 (61%), Gaps = 18/419 (4%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++ + KE F P+ GKV MYVCG+TAYD H+GHAR+ V FD+L RYL +L V++
Sbjct: 3 IYNTLHRAKEKFVPLEPGKVRMYVCGITAYDYCHIGHARSCVVFDVLVRYLRYLGYHVSF 62
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRNFTDVDDKII+RA + G + ++ +Y + + +DM +L L +PR + H+E++
Sbjct: 63 VRNFTDVDDKIIKRAEEEGLDSDQVAEKYIEAFYLDMDELNVLKADVEPRATRHIEEMIQ 122
Query: 141 MITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
+ +++ AY+ G D++F V + P YG+LSG+ +E ++G R+A D K +P DFAL
Sbjct: 123 VTKSLLDKGFAYITSGKDIYFRVRRMPRYGQLSGRNIEELQSGSRIAPDEEKEDPLDFAL 182
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WK AK GEPSWDSPWG GRPGWH+EC+AMS YL FDIHGGG DL FPHHENE AQS
Sbjct: 183 WKTAKPGEPSWDSPWGAGRPGWHLECTAMSEKYLGIPFDIHGGGQDLAFPHHENEKAQSE 242
Query: 260 AACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLN 319
AA V YW+HNG V ++EKMSKSLGNF TIR I + +H LR FL++ HYRSPL+
Sbjct: 243 AAFDREFVKYWVHNGFVRVDSEKMSKSLGNFITIRDIMKDFHGEVLRFFLLTKHYRSPLD 302
Query: 320 YSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSD 379
YS L+ A+ +Y + L +E + P A + L ++ M D
Sbjct: 303 YSDGSLEETEKALKRVYWAKTGLQKELQ--KEKWSKGQGFPEASQELQDLASKWDQAMQD 360
Query: 380 DLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DLNT+ + F + + ML+ K + RK E + + ++LG+L
Sbjct: 361 DLNTAEAVGYVF----GLVRLANRMLEDK-----------TFRKSEAGKEIIQQMLGML 404
>gi|15641850|ref|NP_231482.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121591342|ref|ZP_01678630.1| cysteinyl-tRNA synthetase [Vibrio cholerae 2740-80]
gi|121730275|ref|ZP_01682651.1| cysteinyl-tRNA synthetase [Vibrio cholerae V52]
gi|147673703|ref|YP_001217382.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|227081977|ref|YP_002810528.1| cysteinyl-tRNA synthetase [Vibrio cholerae M66-2]
gi|227118296|ref|YP_002820192.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|229508055|ref|ZP_04397560.1| cysteinyl-tRNA synthetase [Vibrio cholerae BX 330286]
gi|229511706|ref|ZP_04401185.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
gi|229518845|ref|ZP_04408288.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC9]
gi|229607616|ref|YP_002878264.1| cysteinyl-tRNA synthetase [Vibrio cholerae MJ-1236]
gi|254848934|ref|ZP_05238284.1| cysteinyl-tRNA synthetase [Vibrio cholerae MO10]
gi|255745392|ref|ZP_05419341.1| cysteinyl-tRNA synthetase [Vibrio cholera CIRS 101]
gi|298498113|ref|ZP_07007920.1| cysteinyl-tRNA synthetase [Vibrio cholerae MAK 757]
gi|360035732|ref|YP_004937495.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 str. 2010EL-1786]
gi|379741684|ref|YP_005333653.1| cysteinyl-tRNA synthetase [Vibrio cholerae IEC224]
gi|417813891|ref|ZP_12460544.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-49A2]
gi|417817628|ref|ZP_12464257.1| cysteinyl-tRNA synthetase [Vibrio cholerae HCUF01]
gi|418334866|ref|ZP_12943780.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-06A1]
gi|418338484|ref|ZP_12947378.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-23A1]
gi|418346401|ref|ZP_12951163.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-28A1]
gi|418350163|ref|ZP_12954894.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-43A1]
gi|418355542|ref|ZP_12958261.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-61A1]
gi|419826827|ref|ZP_14350326.1| cysteine--tRNA ligase [Vibrio cholerae CP1033(6)]
gi|421318339|ref|ZP_15768907.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1032(5)]
gi|421321620|ref|ZP_15772173.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1038(11)]
gi|421325417|ref|ZP_15775941.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1041(14)]
gi|421329079|ref|ZP_15779589.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1042(15)]
gi|421332987|ref|ZP_15783464.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1046(19)]
gi|421336576|ref|ZP_15787037.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1048(21)]
gi|421340007|ref|ZP_15790439.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-20A2]
gi|421348335|ref|ZP_15798712.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-46A1]
gi|422896952|ref|ZP_16934405.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-40A1]
gi|422903151|ref|ZP_16938131.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-48A1]
gi|422907036|ref|ZP_16941843.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-70A1]
gi|422913886|ref|ZP_16948392.1| cysteinyl-tRNA synthetase [Vibrio cholerae HFU-02]
gi|422926092|ref|ZP_16959106.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-38A1]
gi|423145411|ref|ZP_17133005.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-19A1]
gi|423150087|ref|ZP_17137401.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-21A1]
gi|423153907|ref|ZP_17141088.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-22A1]
gi|423156990|ref|ZP_17144083.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-32A1]
gi|423160561|ref|ZP_17147501.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-33A2]
gi|423165379|ref|ZP_17152110.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-48B2]
gi|423731398|ref|ZP_17704701.1| cysteine--tRNA ligase [Vibrio cholerae HC-17A1]
gi|423767016|ref|ZP_17712820.1| cysteine--tRNA ligase [Vibrio cholerae HC-50A2]
gi|423895289|ref|ZP_17727036.1| cysteine--tRNA ligase [Vibrio cholerae HC-62A1]
gi|423930727|ref|ZP_17731430.1| cysteine--tRNA ligase [Vibrio cholerae HC-77A1]
gi|424002842|ref|ZP_17745917.1| cysteine--tRNA ligase [Vibrio cholerae HC-17A2]
gi|424006631|ref|ZP_17749601.1| cysteine--tRNA ligase [Vibrio cholerae HC-37A1]
gi|424024612|ref|ZP_17764263.1| cysteine--tRNA ligase [Vibrio cholerae HC-62B1]
gi|424027497|ref|ZP_17767100.1| cysteine--tRNA ligase [Vibrio cholerae HC-69A1]
gi|424586768|ref|ZP_18026347.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1030(3)]
gi|424591511|ref|ZP_18030938.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1037(10)]
gi|424595416|ref|ZP_18034737.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1040(13)]
gi|424599332|ref|ZP_18038513.1| cysteinyl-tRNA synthetase [Vibrio Cholerae CP1044(17)]
gi|424602052|ref|ZP_18041194.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1047(20)]
gi|424607022|ref|ZP_18045966.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1050(23)]
gi|424610847|ref|ZP_18049686.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-39A1]
gi|424613658|ref|ZP_18052446.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-41A1]
gi|424617639|ref|ZP_18056311.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-42A1]
gi|424622418|ref|ZP_18060926.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-47A1]
gi|424645383|ref|ZP_18083119.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-56A2]
gi|424653150|ref|ZP_18090530.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-57A2]
gi|424656971|ref|ZP_18094256.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-81A2]
gi|440710051|ref|ZP_20890702.1| cysteinyl-tRNA synthetase [Vibrio cholerae 4260B]
gi|443504209|ref|ZP_21071167.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-64A1]
gi|443508106|ref|ZP_21074870.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-65A1]
gi|443511949|ref|ZP_21078587.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-67A1]
gi|443515507|ref|ZP_21082018.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-68A1]
gi|443519298|ref|ZP_21085695.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-71A1]
gi|443524191|ref|ZP_21090404.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-72A2]
gi|443531789|ref|ZP_21097803.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-7A1]
gi|443535585|ref|ZP_21101463.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-80A1]
gi|443539133|ref|ZP_21104987.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-81A1]
gi|449055723|ref|ZP_21734391.1| Cysteinyl-tRNA synthetase [Vibrio cholerae O1 str. Inaba G4222]
gi|11387140|sp|Q9KQZ9.1|SYC_VIBCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187631647|sp|A5F763.1|SYC_VIBC3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254781697|sp|C3LNF1.1|SYC_VIBCM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|9656376|gb|AAF94996.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121546806|gb|EAX56972.1| cysteinyl-tRNA synthetase [Vibrio cholerae 2740-80]
gi|121627977|gb|EAX60538.1| cysteinyl-tRNA synthetase [Vibrio cholerae V52]
gi|146315586|gb|ABQ20125.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|227009865|gb|ACP06077.1| cysteinyl-tRNA synthetase [Vibrio cholerae M66-2]
gi|227013746|gb|ACP09956.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|229343534|gb|EEO08509.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC9]
gi|229351671|gb|EEO16612.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
gi|229355560|gb|EEO20481.1| cysteinyl-tRNA synthetase [Vibrio cholerae BX 330286]
gi|229370271|gb|ACQ60694.1| cysteinyl-tRNA synthetase [Vibrio cholerae MJ-1236]
gi|254844639|gb|EET23053.1| cysteinyl-tRNA synthetase [Vibrio cholerae MO10]
gi|255737222|gb|EET92618.1| cysteinyl-tRNA synthetase [Vibrio cholera CIRS 101]
gi|297542446|gb|EFH78496.1| cysteinyl-tRNA synthetase [Vibrio cholerae MAK 757]
gi|340036377|gb|EGQ97353.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-49A2]
gi|340037351|gb|EGQ98326.1| cysteinyl-tRNA synthetase [Vibrio cholerae HCUF01]
gi|341621711|gb|EGS47448.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-70A1]
gi|341621796|gb|EGS47529.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-48A1]
gi|341622546|gb|EGS48200.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-40A1]
gi|341637547|gb|EGS62225.1| cysteinyl-tRNA synthetase [Vibrio cholerae HFU-02]
gi|341646298|gb|EGS70412.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-38A1]
gi|356417575|gb|EHH71190.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-06A1]
gi|356418447|gb|EHH72044.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-21A1]
gi|356423021|gb|EHH76482.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-19A1]
gi|356428467|gb|EHH81693.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-22A1]
gi|356430126|gb|EHH83335.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-23A1]
gi|356433480|gb|EHH86669.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-28A1]
gi|356440077|gb|EHH93038.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-32A1]
gi|356444659|gb|EHH97468.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-43A1]
gi|356445658|gb|EHH98460.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-33A2]
gi|356451191|gb|EHI03892.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-48B2]
gi|356452040|gb|EHI04719.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-61A1]
gi|356646886|gb|AET26941.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 str. 2010EL-1786]
gi|378795194|gb|AFC58665.1| cysteinyl-tRNA synthetase [Vibrio cholerae IEC224]
gi|395916597|gb|EJH27427.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1032(5)]
gi|395917255|gb|EJH28083.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1041(14)]
gi|395918614|gb|EJH29438.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1038(11)]
gi|395927613|gb|EJH38376.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1042(15)]
gi|395928389|gb|EJH39142.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1046(19)]
gi|395931675|gb|EJH42419.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1048(21)]
gi|395939290|gb|EJH49972.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-20A2]
gi|395942914|gb|EJH53590.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-46A1]
gi|395958976|gb|EJH69427.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-56A2]
gi|395959689|gb|EJH70106.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-57A2]
gi|395962555|gb|EJH72851.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-42A1]
gi|395970947|gb|EJH80652.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-47A1]
gi|395973689|gb|EJH83243.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1030(3)]
gi|395976039|gb|EJH85503.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1047(20)]
gi|408007296|gb|EKG45379.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-39A1]
gi|408013276|gb|EKG51005.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-41A1]
gi|408031528|gb|EKG68144.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1037(10)]
gi|408032309|gb|EKG68895.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1040(13)]
gi|408041832|gb|EKG77920.1| cysteinyl-tRNA synthetase [Vibrio Cholerae CP1044(17)]
gi|408043299|gb|EKG79300.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1050(23)]
gi|408053849|gb|EKG88848.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-81A2]
gi|408607617|gb|EKK81020.1| cysteine--tRNA ligase [Vibrio cholerae CP1033(6)]
gi|408624020|gb|EKK96972.1| cysteine--tRNA ligase [Vibrio cholerae HC-17A1]
gi|408633949|gb|EKL06229.1| cysteine--tRNA ligase [Vibrio cholerae HC-50A2]
gi|408654159|gb|EKL25301.1| cysteine--tRNA ligase [Vibrio cholerae HC-77A1]
gi|408655089|gb|EKL26214.1| cysteine--tRNA ligase [Vibrio cholerae HC-62A1]
gi|408845239|gb|EKL85355.1| cysteine--tRNA ligase [Vibrio cholerae HC-37A1]
gi|408846012|gb|EKL86124.1| cysteine--tRNA ligase [Vibrio cholerae HC-17A2]
gi|408870174|gb|EKM09454.1| cysteine--tRNA ligase [Vibrio cholerae HC-62B1]
gi|408878800|gb|EKM17793.1| cysteine--tRNA ligase [Vibrio cholerae HC-69A1]
gi|439974274|gb|ELP50451.1| cysteinyl-tRNA synthetase [Vibrio cholerae 4260B]
gi|443431154|gb|ELS73706.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-64A1]
gi|443435312|gb|ELS81455.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-65A1]
gi|443438932|gb|ELS88647.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-67A1]
gi|443442917|gb|ELS96219.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-68A1]
gi|443447094|gb|ELT03749.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-71A1]
gi|443449525|gb|ELT09816.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-72A2]
gi|443457179|gb|ELT24576.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-7A1]
gi|443461125|gb|ELT32198.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-80A1]
gi|443465233|gb|ELT39893.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-81A1]
gi|448264762|gb|EMB01999.1| Cysteinyl-tRNA synthetase [Vibrio cholerae O1 str. Inaba G4222]
Length = 459
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/420 (46%), Positives = 261/420 (62%), Gaps = 30/420 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V + YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWG GRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ + + F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEEYVTR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + ++ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDMTNASALGSLMRELADVIGIL 394
>gi|429083804|ref|ZP_19146830.1| Cysteinyl-tRNA synthetase [Cronobacter condimenti 1330]
gi|426547158|emb|CCJ72871.1| Cysteinyl-tRNA synthetase [Cronobacter condimenti 1330]
Length = 461
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+M++QKE F PI G+VGMYVCG+T YDL H+GH R ++FD++ RYL L ++
Sbjct: 2 LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVAEMHKDFDALNILRPESEPRATQHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q+I AYV GDV FAVE +YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + +P R A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDSEAAPAGGEAFETRFVEAMNDDFN 351
>gi|392373606|ref|YP_003205439.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Candidatus Methylomirabilis oxyfera]
gi|258591299|emb|CBE67598.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Candidatus Methylomirabilis oxyfera]
Length = 530
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/428 (44%), Positives = 260/428 (60%), Gaps = 10/428 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN++ Q+KE F P V G+V MY CG T YD +H+GHARAA++FD+++RYLE
Sbjct: 1 MALVVYNTLHQKKERFEPAVPGEVRMYACGPTVYDRAHIGHARAALTFDVVWRYLERRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V+YVRN+TDVDDKII+RA +LG++ SL + Y DM L PT +PR + H+
Sbjct: 61 KVSYVRNYTDVDDKIIQRAAELGQSRESLVEEQIEAYRRDMDALGLRTPTEEPRATRHIR 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ ++I ++ AY V+GDV+F V +S +YG+LS + L+ +AG RV VD RKR+P D
Sbjct: 121 EMIEIIRTLMAKGVAYSVDGDVYFEVRRSSDYGKLSHRGLDELQAGARVEVDPRKRDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA++ GEP+W+SPWGPGRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKASRPGEPAWESPWGPGRPGWHIECSAMSMKYLGETFDIHGGGADLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A YW+HNG V EKMSKSLGN TIR++ R P A + FL+ HYR+
Sbjct: 241 QSECATGKPFARYWIHNGFVNIRAEKMSKSLGNILTIRELLGRISPCAFKLFLLGTHYRA 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP-AAEDCINKLRDEFHA 375
P+ +S L SA+ A + L++ + +R++ I + E+
Sbjct: 301 PVEFSEDALISATAAAARFHTVLEEVQRFQDVQGSKADRSRMDSLPLSGQIREAEQEYTD 360
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT L F + +N+ + + SL+ L + E LR L
Sbjct: 361 AMDDDFNTPRALAALFN-----LTKGVNVALRDVDGAPEPSLVYGL----SMAGETLRTL 411
Query: 436 GLLPPGAY 443
G + G +
Sbjct: 412 GSVLGGLF 419
>gi|421465010|ref|ZP_15913698.1| cysteine--tRNA ligase [Acinetobacter radioresistens WC-A-157]
gi|400204272|gb|EJO35256.1| cysteine--tRNA ligase [Acinetobacter radioresistens WC-A-157]
Length = 473
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 189/422 (44%), Positives = 265/422 (62%), Gaps = 28/422 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L EV Y
Sbjct: 6 LYNSEQRKKVEFVPRKAGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWEVKY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII+RAN+ GE +L++R+ Q D L CL P PR +++++Q+++
Sbjct: 66 VRNITDIDDKIIKRANENGETIQALTDRFIQAMNEDAHRLGCLEPDEAPRATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++++N AY GDV+F VE+ YGRLSG++L++ +AG +RV V+ K++P DF
Sbjct: 126 MIGKLVDNGSAYPATNGDVYFQVEQFNKYGRLSGRKLDDMQAGASDRVDVEVDKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP W+SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPFWNSPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEAATGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLR-DEFHAR 376
+N+S + L A A+ Y A +Q+ + N D +++ + F+A
Sbjct: 306 VNFSDVALKEAKTALTRFYH-------AFKAYQQ-----QFNEELTDHFSQIHLERFNAA 353
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ + F+ + LN K++ +Q +LR + N ILG
Sbjct: 354 MCDDFNTAEAMAVLFE-----LAKELNRALKEENAEQAKVFYSTLRHLTN-------ILG 401
Query: 437 LL 438
L+
Sbjct: 402 LV 403
>gi|365966530|ref|YP_004948092.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|365745443|gb|AEW76348.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
ANH9381]
Length = 469
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 259/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+ A + E L +R E D L L P ++PR + H+ +I
Sbjct: 72 TYVRNITDVDDKIIKHALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ ++I AYV + GDV F VE +YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 132 IDIVQKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNPMDF 191
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 311
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGTDKSAVAF-----------GGENFV----DAFREAM 356
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 357 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MAKANGLAARLRELAAILGL 403
Query: 438 L 438
L
Sbjct: 404 L 404
>gi|421857183|ref|ZP_16289537.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|403187405|dbj|GAB75738.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 473
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 189/422 (44%), Positives = 265/422 (62%), Gaps = 28/422 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L EV Y
Sbjct: 6 LYNSEQRKKVEFVPRKAGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWEVKY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII+RAN+ GE +L++R+ Q D L CL P PR +++++Q+++
Sbjct: 66 VRNITDIDDKIIKRANENGETIQALTDRFIQAMNEDAHRLGCLEPDEAPRATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++++N AY GDV+F VE+ YGRLSG++L++ +AG +RV V+ K++P DF
Sbjct: 126 MIGKLVDNGSAYPATNGDVYFQVEQFNKYGRLSGRKLDDMQAGASDRVDVEVDKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP W+SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPFWNSPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEAATGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLR-DEFHAR 376
+N+S + L A A+ Y A +Q+ + N D +++ + F+A
Sbjct: 306 VNFSDVALKEAKTALTRFYH-------AFKAYQQ-----QFNEELTDHFSQIHLERFNAA 353
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ + F+ + LN K++ +Q +LR + N ILG
Sbjct: 354 MCDDFNTAEAMAVLFE-----LAKELNRALKEENAEQAKVFYSTLRHLTN-------ILG 401
Query: 437 LL 438
L+
Sbjct: 402 LV 403
>gi|148827229|ref|YP_001291982.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittGG]
gi|187629826|sp|A5UFP3.1|SYC_HAEIG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148718471|gb|ABQ99598.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittGG]
Length = 459
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 257/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGADQSAVVF-----------GGENFVETFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|417791399|ref|ZP_12438856.1| cysteinyl-tRNA synthetase [Cronobacter sakazakii E899]
gi|449309141|ref|YP_007441497.1| cysteinyl-tRNA synthetase [Cronobacter sakazakii SP291]
gi|333954515|gb|EGL72360.1| cysteinyl-tRNA synthetase [Cronobacter sakazakii E899]
gi|449099174|gb|AGE87208.1| cysteinyl-tRNA synthetase [Cronobacter sakazakii SP291]
Length = 461
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 230/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+M++QKE F PI G+VGMYVCG+T YDL H+GH R ++FD++ RYL L ++
Sbjct: 2 LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVAEMHKDFDALNILRPDSEPRATQHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q+I AYV GDV FAVE +YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + + AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDASATAAGGEAFEARFVEAMNDDFN 351
>gi|254360582|ref|ZP_04976731.1| cysteine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|452745743|ref|ZP_21945575.1| cysteinyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
gi|153091122|gb|EDN73127.1| cysteine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|452085882|gb|EME02273.1| cysteinyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
Length = 458
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 200/422 (47%), Positives = 253/422 (59%), Gaps = 32/422 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI +VGMYVCGVT YDL H GH R VSFD++ RYL + +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D L L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDELVDRMIAEMHKDFDALNILRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I+N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 IAMVEKLIHNGHAYVAADGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKSIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KAGEPSW+SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKAGEPSWESPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T + EKMSKSLGNFF+IR + Y +LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS+ LD A A+ +Y L+ C+V+ EH A F M
Sbjct: 302 LDYSIDNLDLARSALERLYTALRGCDVSGEAIGEHYVEA----------------FKTAM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ I LN LK + K L++ +KE+ +LG
Sbjct: 346 DDDFNTPGALAVLFE-----IARELNKLKTEDMAKANGLAV---------RLKELAGVLG 391
Query: 437 LL 438
LL
Sbjct: 392 LL 393
>gi|153839789|ref|ZP_01992456.1| cysteinyl-tRNA synthetase, partial [Vibrio parahaemolyticus AQ3810]
gi|149746697|gb|EDM57685.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
Length = 463
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/425 (44%), Positives = 264/425 (62%), Gaps = 29/425 (6%)
Query: 15 MDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHL 74
+++ LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L
Sbjct: 1 IEIMLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYL 60
Query: 75 KCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDH 134
++T+VRN TD+DDKII+RA + GE+ SL+ R + D L P +PR +
Sbjct: 61 GYDLTFVRNITDIDDKIIKRAAENGESCESLTERLIGDMHADFDALNMKRPDVEPRATQF 120
Query: 135 MEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRN 193
+ +I +++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV +++ KR+
Sbjct: 121 ISEIIELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRS 180
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL FPHHEN
Sbjct: 181 PLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFPHHEN 240
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S H
Sbjct: 241 EIAQSCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGH 300
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRS LNYS L+ A ++ +Y +L+ ++ +P E+ +++ F
Sbjct: 301 YRSQLNYSEDNLNQARASLERLYTSLRGLDLNAAP-----------AGGEEYVSR----F 345
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
A M+DD NT + F A +N LK + +E ++ ++E+
Sbjct: 346 TAAMNDDFNTPEAYSVLFDMA-----REVNRLKTES--------VEKASELGALMRELAD 392
Query: 434 ILGLL 438
++G+L
Sbjct: 393 VIGIL 397
>gi|389841851|ref|YP_006343935.1| cysteinyl-tRNA synthetase [Cronobacter sakazakii ES15]
gi|387852327|gb|AFK00425.1| cysteinyl-tRNA synthetase [Cronobacter sakazakii ES15]
Length = 461
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 230/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+M++QKE F PI G+VGMYVCG+T YDL H+GH R ++FD++ RYL L ++
Sbjct: 2 LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVAEMHKDFDALNILRPDSEPRATQHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q+I AYV GDV FAVE +YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + + AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDASATAAGGEAFEARFVEAMNDDFN 351
>gi|419801786|ref|ZP_14327000.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK262]
gi|385193165|gb|EIF40546.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK262]
Length = 459
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 257/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI GKVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEVFKPIHEGKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q L +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLNQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGENFVEAFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK ++ E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTEEA--------EKANGLAARLRELAGILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|303327042|ref|ZP_07357484.1| cysteine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
gi|345890980|ref|ZP_08841841.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. 6_1_46AFAA]
gi|302863030|gb|EFL85962.1| cysteine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
gi|345048705|gb|EGW52528.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. 6_1_46AFAA]
Length = 483
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/386 (49%), Positives = 241/386 (62%), Gaps = 6/386 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++ +QKE F P+ GKV MYVCG+TAYD H+GHAR+A+ FD L R+L HL EV
Sbjct: 1 MQIYNTLGRQKEEFIPVRPGKVHMYVCGITAYDYCHIGHARSALVFDALVRHLRHLGLEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII RAN G + ++ Y + DM L L +PR ++++ QI
Sbjct: 61 TFVRNFTDVDDKIINRANKEGRDWQEVAQTYIDAFHEDMDRLGVLRADLEPRATEYIPQI 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AY GDV+F V P YG+LSG+ L+ +G RVA K +P DF
Sbjct: 121 QELCAKLIAEGTAYATPSGDVYFRVRSYPPYGKLSGRSLDELLSGARVAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSWDSPWG GRPGWHIECSAMS+ YL DIHGGG DL+FPHHENEIAQ
Sbjct: 181 ALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSSPYLP--LDIHGGGQDLVFPHHENEIAQ 238
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A C+ YW+HNG V N EKMSKSLGNF TIR I Y P LR FL+ HYRSP
Sbjct: 239 SEAVCRCELARYWVHNGFVQVNAEKMSKSLGNFKTIRDILGSYLPETLRFFLLGKHYRSP 298
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++++ +D A A +Y +L + AL +AE L F A +
Sbjct: 299 IDFTAEGMDEAEKAQHRVYSSLMEARKALERASWKKTPLPAELSAE--WAALPQAFEAAL 356
Query: 378 SDDLNTSHILTGAFQDALKFINSSLN 403
DDLNT+ L F ++ +N L
Sbjct: 357 DDDLNTAQALGQIFSQ-VRIVNRLLE 381
>gi|16272052|ref|NP_438251.1| cysteinyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
gi|260580618|ref|ZP_05848445.1| cysteinyl-tRNA synthetase [Haemophilus influenzae RdAW]
gi|1174501|sp|P43816.1|SYC_HAEIN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|1573026|gb|AAC21753.1| cysteinyl-tRNA synthetase (cysS) [Haemophilus influenzae Rd KW20]
gi|260092680|gb|EEW76616.1| cysteinyl-tRNA synthetase [Haemophilus influenzae RdAW]
Length = 459
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 257/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEYFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGENFVATFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|403054114|ref|ZP_10908598.1| cysteinyl-tRNA ligase [Acinetobacter bereziniae LMG 1003]
Length = 457
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 191/421 (45%), Positives = 257/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVKY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RAN+ GE+ +L++R+ Q D +L CL P PR +D+++Q+++
Sbjct: 66 VRNITDIDDKIIARANENGESITALTDRFIQAMNEDAENLGCLHPDEAPRATDYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F VEK YGRLSG++L++ +AG ERV VD K++P DF
Sbjct: 126 MIGHLVNKGAAYPSANGDVYFEVEKFARYGRLSGRKLDDMQAGASERVDVDVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTDEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S L A + Y A +Q+ + E + + F+ M
Sbjct: 306 VNFSDFALKEAKTTLSRFYH-------AFKAYQQVYADLSTDVLDETFVER----FNIAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NTS + F+ I LN K++ +Q +LR + N ILGL
Sbjct: 355 RDDFNTSEAIAVLFE-----IIKELNRAVKEENAEQATLYYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|330445515|ref|ZP_08309167.1| cysteinyl-tRNA synthetase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489706|dbj|GAA03664.1| cysteinyl-tRNA synthetase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 460
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 182/350 (52%), Positives = 230/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE FTPI GKVGMYVCGVT YDL H+GH R VSFD++ RYL + ++
Sbjct: 2 LKIYNSLTRQKEAFTPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCESLTERLIGEMHADFDALGMKRPDVEPRATQFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I AYV GDV F V K +YGRLS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IALCERLIERGFAYVASNGDVMFEVSKFEDYGRLSKQDLDQLQAGARVDIETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y P +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLNHYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y +L+ + ++ AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTSLRGLDTSVEAAGGEEFVARFKEAMDDDFN 351
>gi|372277493|ref|ZP_09513529.1| cysteinyl-tRNA synthetase [Pantoea sp. SL1_M5]
gi|390435779|ref|ZP_10224317.1| cysteinyl-tRNA ligase [Pantoea agglomerans IG1]
Length = 461
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 195/421 (46%), Positives = 255/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L ++
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKIIRRAN+ GE+ +L+NR E D A L LPP +PR + H+ +I
Sbjct: 62 NYVRNITDIDDKIIRRANENGESIETLTNRMIGEMHNDFAALGILPPDEEPRATRHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +I AYV + GDV F V +YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELVETLIARGHAYVADNGDVMFDVLSDTDYGALSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KA EP+W SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKADEPAWSSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY L+ A A+ +Y L+ + S HG A F + M
Sbjct: 302 LNYGEDNLNQARAALERLYTALRHTD---SSVPAHGGEA------------FEARFRSAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + S + ++++E+ +LG+
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRLKSEDGA--------SAHGLASKLREMANVLGI 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|445414926|ref|ZP_21434004.1| cysteine--tRNA ligase [Acinetobacter sp. WC-743]
gi|444764053|gb|ELW88381.1| cysteine--tRNA ligase [Acinetobacter sp. WC-743]
Length = 473
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 191/421 (45%), Positives = 257/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVKY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RAN+ GE+ +L++R+ Q D +L CL P PR +D+++Q+++
Sbjct: 66 VRNITDIDDKIIARANENGESITALTDRFIQAMNEDAENLGCLHPDEAPRATDYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F VEK YGRLSG++L++ +AG ERV VD K++P DF
Sbjct: 126 MIGHLVNKGAAYPSANGDVYFEVEKFAKYGRLSGRKLDDMQAGASERVDVDVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTDEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S L A + Y A +Q+ + E + + F+ M
Sbjct: 306 VNFSDFALKEAKTTLSRFYH-------AFKAYQQVYADLSTDVLDETFVER----FNIAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NTS + F+ I LN K++ +Q +LR + N ILGL
Sbjct: 355 RDDFNTSEAIAVLFE-----IIKELNRAVKEENAEQATLYYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|419839695|ref|ZP_14363100.1| cysteine--tRNA ligase [Haemophilus haemolyticus HK386]
gi|386909118|gb|EIJ73795.1| cysteine--tRNA ligase [Haemophilus haemolyticus HK386]
Length = 459
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 257/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGENFVATFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|145639628|ref|ZP_01795231.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittII]
gi|145642163|ref|ZP_01797732.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R3021]
gi|145271185|gb|EDK11099.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittII]
gi|145273154|gb|EDK13031.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
gi|309750601|gb|ADO80585.1| Cysteinyl-tRNA synthetase [Haemophilus influenzae R2866]
Length = 459
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 257/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGADQSAVVF-----------GGENFVETFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|407789635|ref|ZP_11136735.1| cysteinyl-tRNA ligase [Gallaecimonas xiamenensis 3-C-1]
gi|407206295|gb|EKE76253.1| cysteinyl-tRNA ligase [Gallaecimonas xiamenensis 3-C-1]
Length = 457
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 183/375 (48%), Positives = 239/375 (63%), Gaps = 18/375 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N+++++KE F P+V GKV +YVCG+T YDL H+GHAR V+FD++ RYL H +V
Sbjct: 2 LKVFNTLSREKETFQPLVPGKVSLYVCGITIYDLMHIGHARTYVAFDVINRYLRHKGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RAN+ GE+ +L+ R+ D A L LPP +P+V+ HM+ I
Sbjct: 62 TYVRNITDVDDKIIKRANENGESCEALTERFATLMREDFAALNTLPPDIEPKVTTHMDDI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ +++ AY + GDV F V+ YG+LS Q L+ +AG RV V+ KR+P DF
Sbjct: 122 IQMVKALVDRGHAYQADNGDVLFEVKSFEQYGQLSRQDLDALQAGARVDVEDAKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEP W SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKQAKPGEPKWASPWGEGRPGWHIECSAMSSRHLGPVFDIHGGGSDLTFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A YW+H+G V N EKMSKSLGNFFT+R + + + +R+FL+++HYRS
Sbjct: 242 SCCASGQQFARYWLHSGMVQVNKEKMSKSLGNFFTVRDVLKVFDAETVRYFLLTSHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ G +A A + F A M
Sbjct: 302 LNYSEDNLNQAKAALERLYTALK------------GVSAEAELAGDWAAR-----FDAAM 344
Query: 378 SDDLNTSHILTGAFQ 392
DD NT L F+
Sbjct: 345 DDDFNTPEALVVLFE 359
>gi|442611662|ref|ZP_21026368.1| Cysteinyl-tRNA synthetase [Pseudoalteromonas luteoviolacea B = ATCC
29581]
gi|441747590|emb|CCQ12430.1| Cysteinyl-tRNA synthetase [Pseudoalteromonas luteoviolacea B = ATCC
29581]
Length = 459
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 194/394 (49%), Positives = 241/394 (61%), Gaps = 23/394 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++T+QKE F P+ GKV MYVCG+T YD H+GHAR VSFD++ RYL HL +V
Sbjct: 2 LQIYNTLTRQKEEFKPLTPGKVDMYVCGITIYDYCHVGHARTYVSFDVMNRYLRHLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RAN+ E L+ R + D A L LP +P V+ HM++I
Sbjct: 62 TYVRNITDVDDKIIKRANENNEAINDLTVRMTKAMHDDFAALNMLPADIEPTVTGHMDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I AYV + GDV F V +YG+LS Q LE +AG RV V K +P DF
Sbjct: 122 IVMVERLIEKGHAYVAKNGDVLFDVSTFTDYGKLSQQDLEMLQAGARVEVVQDKEDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKPSEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSLGNFFT+R + + + +R+FLI+ HYRS
Sbjct: 242 SCCANHGQYVNTWIHTGMVQVNKEKMSKSLGNFFTLRDVLKEFDAETVRYFLINGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI-NKLRDEFHAR 376
LNYS L+ A V IY L+ + P A D + N F A
Sbjct: 302 LNYSHENLEQARATVERIYTALRG----------------VKPVAVDLLSNDYVARFEAA 345
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP 410
M+DD NT L F+ + +N LK+ +P
Sbjct: 346 MNDDFNTPEALPVIFE-----LAKEVNRLKEAEP 374
>gi|406037361|ref|ZP_11044725.1| cysteinyl-tRNA ligase [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 473
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 187/421 (44%), Positives = 259/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G++ MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII RAN+ GE L+ R+ D A+L C+ P P+ +++++Q++
Sbjct: 66 IRNITDIDDKIIARANENGETIQQLTARFIDAMNEDAANLGCVLPDEAPKATEYIDQMQS 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI +++N AY GDV+F V K YGRLSG++LE+ +AG ERV V+ K++P DF
Sbjct: 126 MIATLVDNGTAYPAANGDVYFEVTKFDKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S L A A+ Y + + + Q +G+ E F+A M
Sbjct: 306 VNFSDFALKEAKTALSRFYHSFKAYQ------QMYGQ-----KTVETLEQGFVKRFNAAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ +Q L +LR + N ILGL
Sbjct: 355 RDDFNTAETMAVLFE-----LNKELNRAVKEETAEQATVLYSTLRYLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|421694240|ref|ZP_16133865.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-692]
gi|404568242|gb|EKA73346.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-692]
Length = 473
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 187/421 (44%), Positives = 260/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|421675648|ref|ZP_16115568.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC065]
gi|421693049|ref|ZP_16132696.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-116]
gi|404559102|gb|EKA64374.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-116]
gi|410381910|gb|EKP34471.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC065]
Length = 473
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 187/421 (44%), Positives = 260/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|416074249|ref|ZP_11584479.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|444337722|ref|ZP_21151657.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|348006937|gb|EGY47302.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|443546405|gb|ELT56069.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
Length = 469
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 259/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ ++I AYV + GDV F VE +YG+LS Q LE +AG R+ ++ K+N DF
Sbjct: 132 IDIVQKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNTMDF 191
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 311
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGTDKSAVAF-----------GGENFV----DAFREAM 356
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 357 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MAKANGLAARLRELAAILGL 403
Query: 438 L 438
L
Sbjct: 404 L 404
>gi|71906558|ref|YP_284145.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
gi|109894895|sp|Q47HK6.1|SYC_DECAR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71846179|gb|AAZ45675.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
Length = 456
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 189/377 (50%), Positives = 247/377 (65%), Gaps = 19/377 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+ ++K++FTPI KV MYVCG+T YD HLGHAR V FD++YR+L+ +V
Sbjct: 2 LKIYNSLKREKQVFTPIEPNKVRMYVCGMTVYDYCHLGHARVMVVFDMVYRWLKASGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + GE L+NR+ D L P Y+PR ++++ ++
Sbjct: 62 TYVRNITDIDDKIIKRAIENGETIQQLTNRFIAFMHEDADALGVQRPDYEPRATEYVPEM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+I ++ N AY +GDV +AV K P YG+LSG+ L++ RAGERV VDS K++P DF
Sbjct: 122 LDLIGKLEANGLAYQASDGDVNYAVRKFPGYGKLSGKSLDDLRAGERVEVDSAKQDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEP+W SPWG GRPGWHIECSAMS+ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKHAKPGEPAWQSPWGDGRPGWHIECSAMSSKLLGQHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMHNG V +NEKMSKSLGNFFTIR + E++ +R F++ AHYRSP
Sbjct: 242 SEGANCCNFVNYWMHNGFVRVDNEKMSKSLGNFFTIRTVLEQFDAEVVRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC--INKLRDEFHA 375
LNYS LD A ++ +Y L+D + PAA D N+ F A
Sbjct: 302 LNYSDAHLDDARRSLDSLYFALRD----------------VPPAAADIDWSNEFAGRFAA 345
Query: 376 RMSDDLNTSHILTGAFQ 392
+++D ++ + F+
Sbjct: 346 ALNEDFDSHGAIAVLFE 362
>gi|226940330|ref|YP_002795404.1| Syc [Laribacter hongkongensis HLHK9]
gi|254781683|sp|C1D7F5.1|SYC_LARHH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226715257|gb|ACO74395.1| Syc [Laribacter hongkongensis HLHK9]
Length = 457
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/375 (49%), Positives = 236/375 (62%), Gaps = 14/375 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++++QKE F PI GKV MYVCG+T YD HLGHAR V FD++ R+L ++
Sbjct: 2 LHLYNTLSRQKERFQPIQPGKVNMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + GE L+ R+ D A L P ++PR + + +
Sbjct: 62 TYVRNITDIDDKIIRRAAENGEPINVLTQRFIDAMDEDAAALGVQKPNFEPRATQFVPDM 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF
Sbjct: 122 ISMIEELIGKGRAYAAPNGDVYYAVREFAGYGQLSGKSLDDLRAGERVDVDPNKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP+W SPWG GRPGWHIECSAM+ HY FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWPSPWGQGRPGWHIECSAMNEHYFGPHFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMHNG + +NEKMSKSLGNFFTIR++ E+Y +R F++ AHYRSP
Sbjct: 242 SEGAHDCKFVNYWMHNGFIRVDNEKMSKSLGNFFTIREVLEKYDAEVVRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L++ A + A + N F A M
Sbjct: 302 LNYSDAHLEDARSALSRLYTALKNVPAA-------------DVALDWEANDYARRFRAAM 348
Query: 378 SDDLNTSHILTGAFQ 392
DD NT + F+
Sbjct: 349 DDDFNTVEAVAVLFE 363
>gi|91226019|ref|ZP_01260946.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 12G01]
gi|269968727|ref|ZP_06182720.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 40B]
gi|91189460|gb|EAS75737.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 12G01]
gi|269826654|gb|EEZ80995.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 40B]
Length = 460
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 192/418 (45%), Positives = 260/418 (62%), Gaps = 26/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLDQLQAGARVDIETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ +++ F A M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLNAAP-----------AGGEEYVSR----FTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+DD NT + F D + +N + K + L L + E+ +V+ IL
Sbjct: 347 NDDFNTPEAYSVLF-DMAREVN---------RLKTENLEKASELGALMRELADVIGIL 394
>gi|383935040|ref|ZP_09988478.1| cysteinyl-tRNA synthetase [Rheinheimera nanhaiensis E407-8]
gi|383703805|dbj|GAB58569.1| cysteinyl-tRNA synthetase [Rheinheimera nanhaiensis E407-8]
Length = 459
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 199/423 (47%), Positives = 260/423 (61%), Gaps = 33/423 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN+++++KELFTPIV GK G+YVCG+T YD H+GHAR V+FD++ RYL L +V
Sbjct: 2 LQIYNTLSRKKELFTPIVPGKAGLYVCGITIYDYCHVGHARTYVAFDVINRYLRFLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E+ +L+ R+ + D L +P +PRV+ HM +I
Sbjct: 62 TYVRNITDVDDKIIKRAAENNESCDALTARFTKAMHADFNALGLMPADIEPRVTTHMAEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI Q++ AYV +GDV F V K YG LS Q L+ +AG RV V K +P DF
Sbjct: 122 IQMIEQLLAKGYAYVAADGDVLFDVSKYEAYGELSQQNLDMLQAGARVNVAENKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK+AK GEP W SPWG GRPGWHIECSAMSA +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKSAKPGEPYWQSPWGNGRPGWHIECSAMSAKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+ W+H G V + EKMSKSLGNFFT++ + +Y+ A+R+FL+S+HYRS
Sbjct: 242 STCAHGHKYVNTWIHTGMVQVDKEKMSKSLGNFFTVKDVLAQYNAEAVRYFLLSSHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEFHAR 376
LNYS L+ A A+ +Y L++ I PAA+ D + F A
Sbjct: 302 LNYSAENLEQAHAALGRLYTALRN----------------ITPAADVDLQSDYIARFKAA 345
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP-KQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT L F+ + +N K+ +P K +L+ + SL + +L
Sbjct: 346 MDDDFNTPEALPVLFE-----LAREVNRFKETEPAKAAELAGVLSL---------LAGVL 391
Query: 436 GLL 438
GLL
Sbjct: 392 GLL 394
>gi|384142630|ref|YP_005525340.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-ZJ06]
gi|347593123|gb|AEP05844.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-ZJ06]
Length = 473
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 187/421 (44%), Positives = 260/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|239503714|ref|ZP_04663024.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB900]
gi|421678924|ref|ZP_16118806.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC111]
gi|410391847|gb|EKP44211.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC111]
Length = 473
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 187/421 (44%), Positives = 260/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEKYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|387890094|ref|YP_006320392.1| cysteinyl-tRNA synthetase [Escherichia blattae DSM 4481]
gi|414592245|ref|ZP_11441897.1| cysteinyl-tRNA synthetase [Escherichia blattae NBRC 105725]
gi|386924927|gb|AFJ47881.1| cysteinyl-tRNA synthetase [Escherichia blattae DSM 4481]
gi|403196768|dbj|GAB79549.1| cysteinyl-tRNA synthetase [Escherichia blattae NBRC 105725]
Length = 461
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/350 (52%), Positives = 227/350 (64%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVTRYLRFLGYRL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKIIRRA++ GE L +R E D A L LPP +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIRRASENGEAFTDLVDRMIGEMHKDFAALNILPPDSEPRATHHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F+V P YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEITEQLIARGHAYVADNGDVMFSVPTDPGYGVLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWTSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + +P AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKEAAPAGGEAFEARFREAMDDDFN 351
>gi|156974130|ref|YP_001445037.1| cysteinyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
gi|388600078|ref|ZP_10158474.1| cysteinyl-tRNA ligase [Vibrio campbellii DS40M4]
gi|156525724|gb|ABU70810.1| hypothetical protein VIBHAR_01842 [Vibrio harveyi ATCC BAA-1116]
Length = 460
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 192/418 (45%), Positives = 260/418 (62%), Gaps = 26/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q LE +AG RV +++ KR+P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLEQLQAGARVDIETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ +++ + A M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLNAAP-----------AGGEEYVSR----YTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+DD NT + F D + +N + K + L L + E+ +V+ IL
Sbjct: 347 NDDFNTPEAYSVLF-DMAREVN---------RLKTENLEKASELGALMRELADVIGIL 394
>gi|187608842|sp|A7MK00.2|SYC_CROS8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 461
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 230/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+M++QKE F PI G+VGMYVCG+T YDL H+GH R ++FD++ RYL L ++
Sbjct: 2 LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVTEMHKDFDALNILRPDSEPRATQHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q+I AYV GDV FAVE +YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + + AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDASATVAGGEAFEARFVEAMNDDFN 351
>gi|197334356|ref|YP_002156417.1| cysteinyl-tRNA synthetase [Vibrio fischeri MJ11]
gi|197315846|gb|ACH65293.1| cysteinyl-tRNA synthetase [Vibrio fischeri MJ11]
Length = 460
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 192/423 (45%), Positives = 263/423 (62%), Gaps = 31/423 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYNS+T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL L ++
Sbjct: 1 MKIYNSLTRQKEEFKPITEGKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRFLGYDL 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE +L+ R + D L P +PR ++++++I
Sbjct: 61 TFVRNITDIDDKIIKRAAENGETCDALTERLIADMHADFDALNMKRPDVEPRATEYIKEI 120
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD--SRKRNPA 195
++ ++I AYV GDV F V+K YGRLS Q LE +AG RV ++ S KR+
Sbjct: 121 VALVERLIERGFAYVASNGDVMFEVKKYDEYGRLSRQDLEQLQAGSRVTLEEASVKRSGM 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL+FPHHENEI
Sbjct: 181 DFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLMFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYR
Sbjct: 241 AQSCCAHDTPYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLAHYDSETVRYFLMSGHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
S LNYS L+ A ++ +Y +L+ +++++P E+ + + F
Sbjct: 301 SQLNYSEENLNQARASLERLYTSLRGLDLSVTP-----------AGGEEFVGR----FST 345
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F+ A +N LK + +++ K+ ++E+ +L
Sbjct: 346 AMNDDFNTPEAYSVLFEMA-----REVNRLKTEN--------LDTASKLGALMRELADVL 392
Query: 436 GLL 438
GLL
Sbjct: 393 GLL 395
>gi|260913075|ref|ZP_05919557.1| cysteine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
gi|260632662|gb|EEX50831.1| cysteine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
Length = 467
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 198/421 (47%), Positives = 259/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T++KE+F PI KVGMYVCG+T YDL H+GH R V FD++ RYL +L ++
Sbjct: 2 LKIYNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA E+ L +R E D L L P +PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALKNRESCDQLVDRMVAEMYKDFDMLNVLRPDVEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV GDV F VE YG+LS Q LE +AG RV + K+NP DF
Sbjct: 122 ITLVEKLIQRGHAYVSSNGDVMFNVESFKEYGKLSRQNLEQLQAGARVEIVHIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWGPGRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPEEPSWDSPWGPGRPGWHIECSAMNYKVLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YWMH+G + + EKMSKSLGNFFT+R + Y ++R+FL++AHYRSP
Sbjct: 242 SCCAHGNQYVNYWMHSGMIMVDREKMSKSLGNFFTLRDVLNIYDAESVRYFLLNAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + K+A I E+ IN F M
Sbjct: 302 LNYSEENLNLAHTALERLYTALRGTD----------KSA-IACGGENYINA----FKEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + ++ F+ I +N LK + +E + ++E+ ILGL
Sbjct: 347 NDDFNTPNAVSVLFE-----IAREVNKLKNED--------MEKANSLAARLRELADILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|421843582|ref|ZP_16276742.1| cysteinyl-tRNA synthetase [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|411775303|gb|EKS58749.1| cysteinyl-tRNA synthetase [Citrobacter freundii ATCC 8090 = MTCC
1658]
Length = 461
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 232/350 (66%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHSDFDALNILRPDLEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q++ AYV + GDV F V PNYG+LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEQLMAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + +++P AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSVAPAGGEAFEARFIEAMDDDFN 351
>gi|358012794|ref|ZP_09144604.1| cysteinyl-tRNA synthetase [Acinetobacter sp. P8-3-8]
Length = 473
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 188/407 (46%), Positives = 252/407 (61%), Gaps = 19/407 (4%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVKY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RAN+ GE+ +L+ R+ D A L CL P PR +D+++Q+++
Sbjct: 66 VRNITDIDDKIIARANENGESISALTERFIIAMNDDAARLGCLEPDEAPRATDYIDQMQN 125
Query: 141 MITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY E GDV+F VEK YGRLSG++LE+ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGTAYPSENGDVYFEVEKFAKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTDEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S L A + Y A +Q+ T + + + F+A M
Sbjct: 306 VNFSDFALKEAKTTLSRFYH-------AFKAYQQVYGTKTVTTLDTSFVER----FNAAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 424
SDD NT+ + F+ I LN K++ + Q +LR +
Sbjct: 355 SDDFNTAEAIAVLFE-----IIKELNRAVKEENEAQATIFYSTLRHL 396
>gi|289422515|ref|ZP_06424358.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
gi|429727475|ref|ZP_19262243.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius VPI 4330]
gi|289157087|gb|EFD05709.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
gi|429152244|gb|EKX95075.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius VPI 4330]
Length = 467
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 184/410 (44%), Positives = 254/410 (61%), Gaps = 6/410 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN+MT++KE F P+ GKV MYVCG T Y+ HLG+AR FD L RY E+ EV
Sbjct: 1 MKVYNTMTRKKEEFIPLEEGKVKMYVCGPTVYNFIHLGNARPFTVFDTLRRYFEYRGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII+R+++ G +P ++ +Y +EY +D L T P+V+D++++I
Sbjct: 61 TYVQNFTDVDDKIIKRSHEEGISPEEVAEKYIKEYFIDCDGLGIKRATVHPQVTDNIKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I +++ AY GDV F + YG+LS Q +E G R+ VD +K +P DF
Sbjct: 121 ISFIQDLVDKGYAYESNGDVLFRTREFKEYGKLSHQNIEELELGARIDVDDKKEDPLDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP W SPWG GRPGWHIECS MS+ YL + DIH GG DL FPHHENEIAQS
Sbjct: 181 LWKAKKDGEPGWKSPWGEGRPGWHIECSVMSSRYLGNTIDIHAGGQDLQFPHHENEIAQS 240
Query: 259 CAACQDSNV--SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C++ +V +YWMHNG++ + EKMSKSLGNFFT+R+I E+Y +R FL+S HYR+
Sbjct: 241 --ECRNGHVFANYWMHNGYINVDGEKMSKSLGNFFTVREIAEKYDLGLVRFFLLSTHYRN 298
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S LD A + + + E +S E K + D +N + +F
Sbjct: 299 PVNFSDTILDQAKAGLERLTNARDNAEFMMSKL-EDTKMSPEETGLVDELNSYKTKFIEA 357
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 426
M DDLNTS ++ F+ A KF+N+++ K+ + L L + N
Sbjct: 358 MDDDLNTSDAISAIFELA-KFMNTNIKDTSSKEFIGLNIDLFNELTGVLN 406
>gi|420370198|ref|ZP_14870814.1| cysteinyl-tRNA synthetase [Shigella flexneri 1235-66]
gi|391320627|gb|EIQ77459.1| cysteinyl-tRNA synthetase [Shigella flexneri 1235-66]
Length = 461
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/350 (52%), Positives = 232/350 (66%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHNDFDALNILRPDLEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG+LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + +++P AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSVAPAGGEAFEARFIEAMDDDFN 351
>gi|417546818|ref|ZP_12197904.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC032]
gi|421656805|ref|ZP_16097102.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-72]
gi|421664669|ref|ZP_16104805.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC110]
gi|421665433|ref|ZP_16105546.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC087]
gi|421672803|ref|ZP_16112757.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC099]
gi|400384706|gb|EJP43384.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC032]
gi|408503798|gb|EKK05551.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-72]
gi|408711840|gb|EKL57032.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC110]
gi|410378497|gb|EKP31115.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC099]
gi|410390191|gb|EKP42588.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC087]
Length = 473
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 187/421 (44%), Positives = 260/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|417551275|ref|ZP_12202353.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
gi|417564947|ref|ZP_12215821.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|395556703|gb|EJG22704.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|400385730|gb|EJP48805.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
Length = 473
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 187/421 (44%), Positives = 260/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|406892373|gb|EKD37740.1| hypothetical protein ACD_75C01015G0004 [uncultured bacterium]
Length = 490
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/429 (42%), Positives = 267/429 (62%), Gaps = 7/429 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T++I+N+++ +KE + G V +YVCG+T+YD H+GHAR+A++FD++ YL+
Sbjct: 1 MTMRIHNTLSGKKETLQTLEPGHVKLYVCGITSYDYCHIGHARSALAFDMIVNYLKFRGH 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRNFTD+DDKII RA + + L+ R+ +E+ VDM L P +P+ ++H+
Sbjct: 61 KVTYVRNFTDIDDKIIARAAEQQTSAEELAARFIREFYVDMDKLGINRPDIEPKATEHIS 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ +I ++I+ AY DV++ V+ P+YG+LS + +E+ +AG R++++ +KRNP D
Sbjct: 121 EMIALIEELISKGKAYPSGNDVYYIVDSFPDYGKLSKRNVEDMQAGARISINEQKRNPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +K GEP+W+SPWGPGRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FVLWKGSKPGEPTWESPWGPGRPGWHIECSAMSRKYLGETFDIHGGGQDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS + + W+H+G VT +EKMSKSLGNF TIR I YHP LR F+ S HYR+
Sbjct: 241 QSEGVHGKAFANLWIHHGFVTIRDEKMSKSLGNFLTIRDILTHYHPEVLRFFIFSTHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI-NPAAEDCINKLRDEFHA 375
PL++S + A+ + +Y+ + + L P + A I + + F
Sbjct: 301 PLDFSESAMQDATAGLERLYECVAAVD-RLDPQKSGANVASIFTDNDRQLLESMESRFQQ 359
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M +D NT+ G F D +K IN L P S +E L+K N ++++ I+
Sbjct: 360 AMDNDFNTAQA-QGIFFDTVKTINRICRAL----PAVPSASDVEFLKKCANNLRKLADIM 414
Query: 436 GLLPPGAYS 444
G+L A S
Sbjct: 415 GILREDAES 423
>gi|145635477|ref|ZP_01791177.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittAA]
gi|145267242|gb|EDK07246.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittAA]
Length = 459
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 256/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGENFVETFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTEDT--------EKANGLAARLRELGAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|343496600|ref|ZP_08734695.1| cysteinyl-tRNA synthetase [Vibrio nigripulchritudo ATCC 27043]
gi|342821044|gb|EGU55843.1| cysteinyl-tRNA synthetase [Vibrio nigripulchritudo ATCC 27043]
Length = 461
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 194/418 (46%), Positives = 259/418 (61%), Gaps = 26/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+NS+T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIFNSLTRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR + +++I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ +I AYV + GDV F V+K YG+LS Q L+ +AG RV V+ KR+P DF
Sbjct: 122 IDLVETLIERGFAYVADNGDVMFEVKKYDEYGKLSRQDLDQLQAGARVDVELAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ +++ SP E+ + + F M
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDLSASP-----------AGGEEYVTR----FTEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+DD NT + F D + +N + K + L +L + E+ +V+ IL
Sbjct: 347 NDDFNTPEAYSVLF-DMAREVN---------RIKGENLEQASALGALLRELADVIGIL 394
>gi|269960838|ref|ZP_06175209.1| cysteinyl-tRNA synthetase [Vibrio harveyi 1DA3]
gi|424032917|ref|ZP_17772333.1| cysteine--tRNA ligase [Vibrio cholerae HENC-01]
gi|269834502|gb|EEZ88590.1| cysteinyl-tRNA synthetase [Vibrio harveyi 1DA3]
gi|408875278|gb|EKM14429.1| cysteine--tRNA ligase [Vibrio cholerae HENC-01]
Length = 460
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 192/418 (45%), Positives = 259/418 (61%), Gaps = 26/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLDQLQAGARVDIETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ + + F A M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLNAAP-----------AGGEEYVTR----FTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+DD NT + F D + +N + K + L L + E+ +V+ IL
Sbjct: 347 NDDFNTPEAYSVLF-DMAREVN---------RLKTENLEKASELGALMRELADVIGIL 394
>gi|71280239|ref|YP_270455.1| cysteinyl-tRNA synthetase [Colwellia psychrerythraea 34H]
gi|109894893|sp|Q47XL5.1|SYC_COLP3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71145979|gb|AAZ26452.1| cysteinyl-tRNA synthetase [Colwellia psychrerythraea 34H]
Length = 469
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 190/385 (49%), Positives = 231/385 (60%), Gaps = 27/385 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++++QKE FTPI GKVG+YVCG T YDL H+GH R +SFD + RYL +V
Sbjct: 2 LQIYNTLSRQKETFTPINAGKVGLYVCGCTVYDLCHIGHGRTYISFDNIARYLRFSGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDV+DKII RAN+ E +L+ R D L P +PRV+ HM +I
Sbjct: 62 NYVRNITDVEDKIINRANENNETTEALTERTIAAMHQDFDSLNMARPDLEPRVTTHMNEI 121
Query: 139 KDMITQIINNDCAYVV--------EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR 190
MI ++ + AYV +GDV F V +YG+LSGQ LE ++G RV VD
Sbjct: 122 IAMIETLVTKEHAYVAGANAASTGQGDVLFDVSSYNDYGKLSGQNLEQLQSGSRVEVDQN 181
Query: 191 KRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPH 250
K NP DF LWK+AK GEPSW SPWG GRPGWHIECSAM+A L FDIHGGG DL FPH
Sbjct: 182 KNNPLDFVLWKSAKPGEPSWSSPWGEGRPGWHIECSAMNAKELGHHFDIHGGGSDLTFPH 241
Query: 251 HENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLI 310
HENEIAQSC A V+YWMH G V + EKMSKSLGNFFTIR + +Y +R FL
Sbjct: 242 HENEIAQSCCALNTPYVNYWMHTGMVQVDQEKMSKSLGNFFTIRDVLAQYDAETVRFFLT 301
Query: 311 SAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK-- 368
+ HYRS LNYS L A +V IY +L+D +N ++ INK
Sbjct: 302 TGHYRSQLNYSTDNLTQARASVERIYTSLRD----------------VNIESDYVINKDS 345
Query: 369 -LRDEFHARMSDDLNTSHILTGAFQ 392
+F M DD NT L F+
Sbjct: 346 SFVKQFCQAMDDDFNTPQALAVLFE 370
>gi|445434059|ref|ZP_21439862.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC021]
gi|444756927|gb|ELW81464.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC021]
Length = 473
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 187/421 (44%), Positives = 261/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDHSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQAAVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|303249127|ref|ZP_07335367.1| cysteinyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
gi|302489452|gb|EFL49399.1| cysteinyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
Length = 485
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 185/374 (49%), Positives = 238/374 (63%), Gaps = 3/374 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++++N+M + KE F+P+ KV MYVCG+TAYDL H+GHAR++V FD+L RYL HL +V
Sbjct: 1 MQLFNTMARAKEPFSPLHPCKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHLGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII++A G ++ RY + DM L L +PR ++++ +
Sbjct: 61 TFVRNFTDVDDKIIKKAASEGATCAGIAERYIAAFYEDMDKLGILRADAEPRATEYVAAM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM ++I AY GDV+F V +YG+LSG+ +E+ RAG RVA K +P DF
Sbjct: 121 ADMAERLIETGHAYRTPSGDVYFRVRSFADYGKLSGRDIEDMRAGARVAPGDEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKA+K GEP W+SP+GPGRPGWH+ECS MS L FDIHGGG DLIFPHHENEIAQ
Sbjct: 181 ALWKASKPGEPVWESPFGPGRPGWHLECSVMSEKLLGIPFDIHGGGQDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +W+HNG V N EKMSKSLGNF TIR I +RY P LR FL+++HYRSP
Sbjct: 241 SEAATGKEFCRFWVHNGFVRINTEKMSKSLGNFITIRDIYKRYLPEVLRFFLVASHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS LD A + +Y E AL+ + G A E + + F A M
Sbjct: 301 LDYSDQALDEAEKGIKRLYAAKGQMEQALTRAKWSGTKLPAEIAEE--LARHEQGFIAAM 358
Query: 378 SDDLNTSHILTGAF 391
DD NT+ L F
Sbjct: 359 DDDCNTAQALGHVF 372
>gi|440288665|ref|YP_007341430.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium strain FGI
57]
gi|440048187|gb|AGB79245.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium strain FGI
57]
Length = 463
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/366 (50%), Positives = 229/366 (62%), Gaps = 15/366 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YD H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDFCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ + L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVQLVDRMIVEMHKDFDALNILRPDAEPRATHHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV E GDV F+V PNYG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEITERLIERGHAYVAESGDVMFSVPTDPNYGKLSRQDLEQLQAGARVEVAEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KAGEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKAGEPSWPSPWGEGRPGWHIECSAMNCKQLGHHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ F + D F M
Sbjct: 302 LNYSEDNLKQARSALERLYTALRGTTTTDLEFVRSAQYV--------------DRFKEAM 347
Query: 378 SDDLNT 383
DD NT
Sbjct: 348 DDDFNT 353
>gi|386825986|ref|ZP_10113101.1| cysteinyl-tRNA synthetase [Serratia plymuthica PRI-2C]
gi|386377168|gb|EIJ17990.1| cysteinyl-tRNA synthetase [Serratia plymuthica PRI-2C]
Length = 461
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 251/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCGVT YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + GE+ L+ R E D L P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIRRATENGESCDQLTARMLAEMHADFDSLLIERPDQEPRATQHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I+ D AYV GDV F+++ P YG LS Q L+ +AG RV +D KRNP DF
Sbjct: 122 IEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ G A PA + F M
Sbjct: 302 LNYSEENLKQARTALERLYTALR------------GTNANAQPAGGEAFEA---RFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + + + + E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSALFD-----LARDVNRLKGED--------MAAANGLAAELRKLAKVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|423202014|ref|ZP_17188593.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER39]
gi|404615625|gb|EKB12587.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER39]
Length = 458
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 196/418 (46%), Positives = 256/418 (61%), Gaps = 27/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YD H+GH R V+FD++ RYL + ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + L+ R + D L + P +PR + H+E+I
Sbjct: 62 TYVRNITDVDDKIIKRAAETRVTCDELTERLIGDMHADFDALGMVRPDIEPRATQHIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +++ + AYV + GDV F VE +YG+LSGQ LE +AG RV V KRNP DF
Sbjct: 122 IELVQSLLDKEHAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + + +R+FL+S HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHFDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+D VA + E + AR A M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPVAAAAGGEE-QVARFKEA---------------M 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
DD NT + F D ++ IN + K + +++ +L E+ VL IL
Sbjct: 346 DDDFNTPEAYSALF-DLVREIN---------RQKGEDMAVAAALGARLRELGAVLGIL 393
>gi|423119049|ref|ZP_17106733.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5246]
gi|376399695|gb|EHT12309.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5246]
Length = 461
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 182/350 (52%), Positives = 232/350 (66%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHNDFDALNILRPDMEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F+V PNYG+LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEQLIARGHAYVADNGDVMFSVPTDPNYGQLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGNGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++ P AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSVEPAGGDAFEARFIEAMDDDFN 351
>gi|421797751|ref|ZP_16233787.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-21]
gi|410395945|gb|EKP48230.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-21]
Length = 473
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 186/421 (44%), Positives = 260/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ER+ V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERIDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKKNEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEKYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAILFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|260549524|ref|ZP_05823742.1| cysteinyl-tRNA synthetase [Acinetobacter sp. RUH2624]
gi|424056184|ref|ZP_17793705.1| cysteinyl-tRNA synthetase [Acinetobacter nosocomialis Ab22222]
gi|425739726|ref|ZP_18857922.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-487]
gi|260407317|gb|EEX00792.1| cysteinyl-tRNA synthetase [Acinetobacter sp. RUH2624]
gi|407441224|gb|EKF47730.1| cysteinyl-tRNA synthetase [Acinetobacter nosocomialis Ab22222]
gi|425496120|gb|EKU62262.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-487]
Length = 473
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 187/421 (44%), Positives = 260/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKRAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQGFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRYLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|359785387|ref|ZP_09288539.1| cysteinyl-tRNA synthetase [Halomonas sp. GFAJ-1]
gi|359297316|gb|EHK61552.1| cysteinyl-tRNA synthetase [Halomonas sp. GFAJ-1]
Length = 482
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 188/397 (47%), Positives = 249/397 (62%), Gaps = 9/397 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T++KE FTP+V GKV MYVCG+T YD HLGHAR V+FD++ RYL H +V
Sbjct: 1 MQIYNTLTRRKEPFTPLVAGKVSMYVCGMTVYDYCHLGHARVMVAFDVITRYLRHRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKI++RA++ GE +L+ R D A L LPP+ +PR + H+ I
Sbjct: 61 TYVRNITDIDDKILKRADENGETISALTERMIDAMHDDEARLNVLPPSREPRATGHIGDI 120
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I+ AY + GDV++ V K NYG+L+ ++L++ R+G RV VD K +P DF
Sbjct: 121 IAMIETLIDKGFAYPAKNGDVYYRVRKFANYGKLNNRQLDDMRSGARVDVDVHKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK E W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 181 VLWKAAKPTEAHWPSPWGDGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+ WMH G V N EKMSKSLGNFFTIR + + P +R+ L+++HYRS
Sbjct: 241 SEAATGKTYVNTWMHAGAVRVNQEKMSKSLGNFFTIRDVLAEHDPEVVRYLLVASHYRSA 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE--HGKTARIN-PAAEDCINKLRDEFH 374
+NYSV L A ++ Y L+ EV S +E T+ + A+++ + + F
Sbjct: 301 INYSVDSLVEARKSLTRFYTALEGVEVQESVGEELQQAPTSEVAFIASKEEVAAYSERFT 360
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 411
M DD NT L F + +N K + P+
Sbjct: 361 TAMDDDFNTPEALAVLFD-----LAREVNRAKGESPQ 392
>gi|90580099|ref|ZP_01235907.1| cysteinyl-tRNA synthetase [Photobacterium angustum S14]
gi|90438984|gb|EAS64167.1| cysteinyl-tRNA synthetase [Photobacterium angustum S14]
Length = 460
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 195/421 (46%), Positives = 252/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE FTPI GKVGMYVCGVT YDL H+GH R VSFD++ RYL + ++
Sbjct: 2 LKIYNSLTRQKEAFTPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALGMKRPDVEPRATQFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I AYV GDV F V K +YGRLS Q L+ +AG RV +D KR+P DF
Sbjct: 122 IALCERLIERGFAYVASNGDVMFEVSKYEDYGRLSKQDLDQLQAGARVDIDMAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y P +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLNHYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y +L+ + ++ E+ + + F M
Sbjct: 302 LNYSEDNLKQARSALERLYTSLRGLDTSVEA-----------AGGEEFVTR----FKEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + + + ++E+ +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REINRLKTDD--------VATASALGARMRELADVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|445406289|ref|ZP_21431727.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-57]
gi|444781577|gb|ELX05494.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-57]
Length = 473
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 187/421 (44%), Positives = 260/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|444427437|ref|ZP_21222819.1| cysteinyl-tRNA ligase [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444239314|gb|ELU50884.1| cysteinyl-tRNA ligase [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 460
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 192/418 (45%), Positives = 259/418 (61%), Gaps = 26/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q LE +AG RV +++ KR+P DF
Sbjct: 122 IELVAKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLEQLQAGARVDIETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ P E+ +++ + A M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLNAVP-----------AGGEEYVSR----YTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+DD NT + F D + +N + K + L L + E+ +V+ IL
Sbjct: 347 NDDFNTPEAYSVLF-DMAREVN---------RLKTENLEKASELGALMRELADVIGIL 394
>gi|395235526|ref|ZP_10413735.1| cysteinyl-tRNA synthetase [Enterobacter sp. Ag1]
gi|394729760|gb|EJF29694.1| cysteinyl-tRNA synthetase [Enterobacter sp. Ag1]
Length = 461
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 233/350 (66%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL L E+
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRSLGYEL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA++ GE+ ++L +R E D L P +PR + H+ +I
Sbjct: 62 NYVRNITDIDDKIIKRAHENGEDFVALVDRMVVEMHKDFDALNISRPNSEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q++ D AYV E GDV F+V PNYG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEIVEQLLARDHAYVAENGDVMFSVLTDPNYGLLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPAWTSPWGEGRPGWHIECSAMNCKELGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+ WMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNTWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y +L+ + +++P AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTSLRGTDSSVAPAGGEAFEARFREAMDDDFN 351
>gi|373467538|ref|ZP_09558832.1| cysteine--tRNA ligase [Haemophilus sp. oral taxon 851 str. F0397]
gi|371758259|gb|EHO47032.1| cysteine--tRNA ligase [Haemophilus sp. oral taxon 851 str. F0397]
Length = 459
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 256/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGEHFVATFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|366163863|ref|ZP_09463618.1| cysteinyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
Length = 467
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 180/387 (46%), Positives = 249/387 (64%), Gaps = 8/387 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN++T++KE F PI +V MY CG T Y+ H+G+AR + FD + RYLE+ +V
Sbjct: 1 MKIYNTLTRKKEEFVPINEKEVRMYSCGPTVYNYFHIGNARPFIIFDTVRRYLEYRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I+RAN+ G L++R+ +EY +D L T P+ +++++ I
Sbjct: 61 KFVQNFTDIDDKMIKRANEEGITVKDLADRFIKEYFIDAKGLGIDEATVHPKATENIDAI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I ++ N AY V GDV+F++ K YG+LS LE+ G V VD RK+NP DFA
Sbjct: 121 IDLIKKLEENGFAYNVNGDVYFSIGKFKEYGKLSHHSLEDLAIGSSVNVDERKQNPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+WDSPWG GRPGWHIECSAM+ YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 VWKAQKPGEPAWDSPWGKGRPGWHIECSAMANKYLGETIDIHSGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA YWMHNG + NNEKMSKS GNFFT+R I E++ +R F++SAHYRSP+
Sbjct: 241 EAASGKPFAKYWMHNGFINVNNEKMSKSAGNFFTVRDIVEKFDYEVIRFFMLSAHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHA 375
N+S L+ A + + IY L + L EH + ++ + ++L + +F
Sbjct: 301 NFSADLLEQAQNGLERIYNCLDN----LVYLGEHAQAKEMSDEEKSLQSRLLEIKGKFIE 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSL 402
M DDLNT+ + F D +K +NS++
Sbjct: 357 GMDDDLNTADAIAAIF-DIVKEVNSNI 382
>gi|229845478|ref|ZP_04465607.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
gi|229811581|gb|EEP47281.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
Length = 459
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 255/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVERMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGENFVETFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTEDT--------EKANGLAARLRELGAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|68248628|ref|YP_247740.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
gi|319896490|ref|YP_004134683.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3031]
gi|81336945|sp|Q4QPG7.1|SYC_HAEI8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|68056827|gb|AAX87080.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
gi|317431992|emb|CBY80340.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3031]
Length = 459
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 256/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVVF-----------GGENFVETFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTEDA--------EKANGLAARLRELGAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|406676594|ref|ZP_11083780.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC35]
gi|404626817|gb|EKB23627.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC35]
Length = 458
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 196/418 (46%), Positives = 256/418 (61%), Gaps = 27/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YD H+GH R V+FD++ RYL + ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + L+ R + D L + P +PR + H+E+I
Sbjct: 62 TYVRNITDVDDKIIKRAAETRVTCDELTERLIGDMHADFDALGMVRPDIEPRATQHIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +++ + AYV + GDV F VE +YG+LSGQ LE +AG RV V KRNP DF
Sbjct: 122 IELVQSLLDKEHAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+D VA + + + AR A M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPVAAAAGGDE-QVARFKEA---------------M 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
DD NT + F D ++ IN + K + +++ +L E+ VL IL
Sbjct: 346 DDDFNTPEAYSALF-DLVREIN---------RQKGEDMAVAAALGARLRELGAVLGIL 393
>gi|359298707|ref|ZP_09184546.1| cysteinyl-tRNA synthetase [Haemophilus [parainfluenzae] CCUG 13788]
gi|402304648|ref|ZP_10823714.1| cysteine--tRNA ligase [Haemophilus sputorum HK 2154]
gi|400377443|gb|EJP30320.1| cysteine--tRNA ligase [Haemophilus sputorum HK 2154]
Length = 459
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 196/421 (46%), Positives = 251/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIVRYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E +L R E D DL L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDALVERMIAEMHKDFDDLNILRPDVEPRATQHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I AYV +GDV F VE YG LS Q L +AG RV + S K+NP DF
Sbjct: 122 IAMVEKLIAKGHAYVAADGDVMFDVESFSQYGALSRQNLAQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW+SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWESPWGNGRPGWHIECSAMNSQELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T + EKMSKSLGNFF+IR + Y +LR+F ++AHYRS
Sbjct: 242 SCCAHGGEYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YSV LD A A+ +Y L+ C++ ++P E I+ F M
Sbjct: 302 LDYSVDNLDLARSALERLYTALRGCDLTVAP-----------AGGEQYISA----FETAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT L F+ I +N LK + P Q + +K + +LGL
Sbjct: 347 NDDFNTPGALAVLFE-----IAREVNKLKAEDPAQAN--------GLAVRLKALAGVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|343514072|ref|ZP_08751154.1| cysteinyl-tRNA synthetase [Vibrio sp. N418]
gi|342800738|gb|EGU36249.1| cysteinyl-tRNA synthetase [Vibrio sp. N418]
Length = 460
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 193/418 (46%), Positives = 257/418 (61%), Gaps = 26/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GK+GMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCESLTERLIGEMHADFDALNMKRPDIEPRATEFIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV GDV F V K YG+LS Q L+ +AG RV ++S KR+P DF
Sbjct: 122 IALVEKLIERGFAYVASNGDVMFEVSKFDEYGKLSKQDLDQLQAGARVDIESAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWG GRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSAILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHNTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++++ AR N A M
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDLSVEAAGGDEYQARFNDA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+DD NT + F I +N LK + +Q +L + ++ EV+ IL
Sbjct: 347 NDDFNTPEAYSVLFD-----IAREINRLKAENIEQAS-----ALGVVMRQMAEVIGIL 394
>gi|436840386|ref|YP_007324764.1| cysteinyl-tRNA synthetase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432169292|emb|CCO22660.1| cysteinyl-tRNA synthetase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 485
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 176/375 (46%), Positives = 244/375 (65%), Gaps = 7/375 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++ ++KE F P KV +Y CG+TAYDL H+GHAR++V FD+L RYL + +V
Sbjct: 1 MRLYNTLNRKKEEFVPADGNKVSLYACGITAYDLCHIGHARSSVVFDILVRYLRFKEYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTD+DDKII RAN+ G + L+ ++ E+ +DM L L +P+ ++H+ ++
Sbjct: 61 TFVRNFTDIDDKIINRANESGVSAAELAEKFIGEFYMDMDKLNILRADIEPKCTEHIPEM 120
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AY GDV+F V YG+LSG+ +E+ ++G R+ K +P DF
Sbjct: 121 IELTKTLIEKGNAYSTASGDVYFKVRSFEGYGKLSGRNIEDLQSGARIKPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSW+SPWG GRPGWH+ECSAMS YLS FDIHGGG DL FPHHENEIAQ
Sbjct: 181 ALWKAAKPGEPSWESPWGRGRPGWHLECSAMSEKYLSLPFDIHGGGQDLSFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +W+HNG V N+EKMSKSLGNFFTIR I E++ P LR+FL++ HYRSP
Sbjct: 241 SEAATGKEMARFWVHNGFVQINSEKMSKSLGNFFTIRDILEKFMPETLRYFLLTMHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L++S L+ A + +Y ++ AL + + AE I++ ++ M
Sbjct: 301 LDFSFEALEEAEKGIRRVYTAMEQMNEALQKKKWSKAALPADVLAE--IDEAEKGWNEAM 358
Query: 378 SDDLNTS----HILT 388
DD+NT+ HI T
Sbjct: 359 EDDMNTAGAMGHIFT 373
>gi|218703810|ref|YP_002411329.1| cysteinyl-tRNA synthetase [Escherichia coli UMN026]
gi|293403647|ref|ZP_06647738.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1412]
gi|298379257|ref|ZP_06989138.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1302]
gi|300897246|ref|ZP_07115688.1| cysteinyl-tRNA synthetase [Escherichia coli MS 198-1]
gi|419937015|ref|ZP_14453934.1| cysteinyl-tRNA synthetase [Escherichia coli 576-1]
gi|432352190|ref|ZP_19595498.1| cysteinyl-tRNA synthetase [Escherichia coli KTE2]
gi|432400638|ref|ZP_19643398.1| cysteinyl-tRNA synthetase [Escherichia coli KTE26]
gi|432429676|ref|ZP_19672135.1| cysteinyl-tRNA synthetase [Escherichia coli KTE181]
gi|432459496|ref|ZP_19701660.1| cysteinyl-tRNA synthetase [Escherichia coli KTE204]
gi|432474545|ref|ZP_19716558.1| cysteinyl-tRNA synthetase [Escherichia coli KTE208]
gi|432521162|ref|ZP_19758327.1| cysteinyl-tRNA synthetase [Escherichia coli KTE228]
gi|432541381|ref|ZP_19778255.1| cysteinyl-tRNA synthetase [Escherichia coli KTE235]
gi|432630097|ref|ZP_19866047.1| cysteinyl-tRNA synthetase [Escherichia coli KTE80]
gi|432639646|ref|ZP_19875491.1| cysteinyl-tRNA synthetase [Escherichia coli KTE83]
gi|432664713|ref|ZP_19900309.1| cysteinyl-tRNA synthetase [Escherichia coli KTE116]
gi|432791775|ref|ZP_20025869.1| cysteinyl-tRNA synthetase [Escherichia coli KTE78]
gi|432797742|ref|ZP_20031770.1| cysteinyl-tRNA synthetase [Escherichia coli KTE79]
gi|432884493|ref|ZP_20099449.1| cysteinyl-tRNA synthetase [Escherichia coli KTE158]
gi|432910211|ref|ZP_20117338.1| cysteinyl-tRNA synthetase [Escherichia coli KTE190]
gi|433017483|ref|ZP_20205753.1| cysteinyl-tRNA synthetase [Escherichia coli KTE105]
gi|433051826|ref|ZP_20239063.1| cysteinyl-tRNA synthetase [Escherichia coli KTE122]
gi|433066735|ref|ZP_20253578.1| cysteinyl-tRNA synthetase [Escherichia coli KTE128]
gi|433157470|ref|ZP_20342345.1| cysteinyl-tRNA synthetase [Escherichia coli KTE177]
gi|433176977|ref|ZP_20361441.1| cysteinyl-tRNA synthetase [Escherichia coli KTE82]
gi|226735058|sp|B7N980.1|SYC_ECOLU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|218430907|emb|CAR11781.1| cysteinyl-tRNA synthetase [Escherichia coli UMN026]
gi|291429500|gb|EFF02520.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1412]
gi|298280370|gb|EFI21874.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1302]
gi|300358974|gb|EFJ74844.1| cysteinyl-tRNA synthetase [Escherichia coli MS 198-1]
gi|388398419|gb|EIL59325.1| cysteinyl-tRNA synthetase [Escherichia coli 576-1]
gi|430880589|gb|ELC03874.1| cysteinyl-tRNA synthetase [Escherichia coli KTE2]
gi|430929358|gb|ELC49869.1| cysteinyl-tRNA synthetase [Escherichia coli KTE26]
gi|430947342|gb|ELC67043.1| cysteinyl-tRNA synthetase [Escherichia coli KTE181]
gi|430992580|gb|ELD08951.1| cysteinyl-tRNA synthetase [Escherichia coli KTE204]
gi|431010485|gb|ELD24833.1| cysteinyl-tRNA synthetase [Escherichia coli KTE208]
gi|431045716|gb|ELD55946.1| cysteinyl-tRNA synthetase [Escherichia coli KTE228]
gi|431064099|gb|ELD73297.1| cysteinyl-tRNA synthetase [Escherichia coli KTE235]
gi|431174616|gb|ELE74661.1| cysteinyl-tRNA synthetase [Escherichia coli KTE80]
gi|431185221|gb|ELE84951.1| cysteinyl-tRNA synthetase [Escherichia coli KTE83]
gi|431204781|gb|ELF03339.1| cysteinyl-tRNA synthetase [Escherichia coli KTE116]
gi|431342571|gb|ELG29550.1| cysteinyl-tRNA synthetase [Escherichia coli KTE78]
gi|431345962|gb|ELG32876.1| cysteinyl-tRNA synthetase [Escherichia coli KTE79]
gi|431420081|gb|ELH02415.1| cysteinyl-tRNA synthetase [Escherichia coli KTE158]
gi|431447286|gb|ELH28028.1| cysteinyl-tRNA synthetase [Escherichia coli KTE190]
gi|431537058|gb|ELI13207.1| cysteinyl-tRNA synthetase [Escherichia coli KTE105]
gi|431575791|gb|ELI48517.1| cysteinyl-tRNA synthetase [Escherichia coli KTE122]
gi|431590975|gb|ELI61978.1| cysteinyl-tRNA synthetase [Escherichia coli KTE128]
gi|431681896|gb|ELJ47668.1| cysteinyl-tRNA synthetase [Escherichia coli KTE177]
gi|431710199|gb|ELJ74628.1| cysteinyl-tRNA synthetase [Escherichia coli KTE82]
Length = 461
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 230/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGPGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|260902702|ref|ZP_05911097.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
gi|308108249|gb|EFO45789.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
Length = 460
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 190/421 (45%), Positives = 261/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R + D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCESLTERLIGDMHADFDALNMKRPDVEPRATQFISEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ +++ F A M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLNAAP-----------AGGEEYVSR----FTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +E ++ ++E+ ++G+
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKTES--------VEKASELGALMRELADVIGI 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|429090689|ref|ZP_19153399.1| Cysteinyl-tRNA synthetase [Cronobacter dublinensis 1210]
gi|426744860|emb|CCJ79512.1| Cysteinyl-tRNA synthetase [Cronobacter dublinensis 1210]
Length = 461
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 231/350 (66%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+M++QKE F PI G+VGMYVCG+T YDL H+GH R ++FD++ RYL L ++
Sbjct: 2 LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVAEMHKDFDALNILRPESEPRATQHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q+I AYV GDV FAVE +YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + +++ AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDSSVAAAGGEAFEARFVEAMNDDFN 351
>gi|325267558|ref|ZP_08134210.1| cysteine--tRNA ligase [Kingella denitrificans ATCC 33394]
gi|324980908|gb|EGC16568.1| cysteine--tRNA ligase [Kingella denitrificans ATCC 33394]
Length = 487
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 186/393 (47%), Positives = 243/393 (61%), Gaps = 29/393 (7%)
Query: 16 DLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLK 75
++ + +YN++T+QKE F P+ V MYVCG+T YD HLGHAR V FD++ R+L
Sbjct: 14 NMPITLYNTLTRQKEEFVPLNPENVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHG 73
Query: 76 CEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHM 135
+TYVRN TD+DDKII RAN+ GE L+ R+ D L L P +P+ ++H+
Sbjct: 74 YPLTYVRNITDIDDKIIARANENGETIGELTARFIAAMNEDSDALGVLRPDIEPKATEHI 133
Query: 136 EQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNP 194
Q+ MI ++ N AY GDV++AV + YG+LSG+ L++ RAGERV VD+ KR+P
Sbjct: 134 GQMIAMIEDLVANGKAYPAPNGDVYYAVREFAEYGQLSGKSLDDLRAGERVDVDANKRDP 193
Query: 195 ADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
DF LWKAAK GEPSW+SPWG GRPGWHIECSAM FDIHGGG DL FPHHENE
Sbjct: 194 LDFVLWKAAKPGEPSWESPWGNGRPGWHIECSAMGGELFGQTFDIHGGGADLQFPHHENE 253
Query: 255 IAQSCAA----CQ-----------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 299
IAQSC A C +S+V YW+HNG + +NEKMSKSLGNFFTIR + ++
Sbjct: 254 IAQSCGAHGGLCGHDAPHAAGKRINSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVLKK 313
Query: 300 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 359
Y P +R F++ AHYRSPLNYS LD A +++ +Y TL + + A +E
Sbjct: 314 YAPEVVRFFILRAHYRSPLNYSDAHLDDAKNSLARLYNTLGNVQAAEFAVREDA------ 367
Query: 360 PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F A M DD NT+ ++ F+
Sbjct: 368 -------NDYTRRFFAAMDDDFNTAEAMSVLFE 393
>gi|392423874|ref|YP_006464868.1| cysteinyl-tRNA synthetase [Desulfosporosinus acidiphilus SJ4]
gi|391353837|gb|AFM39536.1| cysteinyl-tRNA synthetase [Desulfosporosinus acidiphilus SJ4]
Length = 477
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 183/419 (43%), Positives = 260/419 (62%), Gaps = 13/419 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L+++N+MT+QKE F GKV MYVCG T Y+ H G+AR V FD++ RY +
Sbjct: 1 MSLRLFNTMTRQKEEFKSRESGKVAMYVCGPTTYNFFHAGNARMFVVFDMIRRYFMYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV+NFTDVDDKII+R + G +PL+L+ +Y EY D L LP T P+ ++H+
Sbjct: 61 DVRYVQNFTDVDDKIIQRGHVEGMDPLALAQKYIDEYFKDAKALNILPATVHPKATEHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ ++I +I AY V+GDV+FAV+ PNYG+LSG+ LE+ +AG R+ VD RK +P D
Sbjct: 121 EMIEIIQGLIETGLAYDVDGDVYFAVDHFPNYGKLSGRTLEDMKAGARIEVDERKHHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEPSW+SPWG GRPGWHIEC+AMS YL + FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKKAKPGEPSWESPWGLGRPGWHIECTAMSLKYLGAGFDIHGGGGDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
Q+ + YWMHN +T N EKMSKSLGNFFT R++ + +R +L+ HYR
Sbjct: 241 QTEGYLNGQTFAHYWMHNAFLTINQEKMSKSLGNFFTTRELLAKNSGEVIRFYLLGTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG--KTARINPAAEDCINKLRDEF 373
SPL+++ L A + + +++ + AL + G + RI + + R+ F
Sbjct: 301 SPLDFNDENLGMAQKGLERLQTSVRLAQQAL---ERTGSVRNERIEEGLKKAAQEAREAF 357
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
M DD N++ F+ + ++N ++ P Q + + +K E+ EVL
Sbjct: 358 EKAMDDDFNSALAYAALFE-----LAKTMNGYVQEHPVSSQ--ALATAQKTLIELGEVL 409
>gi|293608603|ref|ZP_06690906.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427426577|ref|ZP_18916628.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-136]
gi|292829176|gb|EFF87538.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425696633|gb|EKU66338.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-136]
Length = 473
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 187/421 (44%), Positives = 259/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|417552874|ref|ZP_12203944.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-81]
gi|417561155|ref|ZP_12212034.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC137]
gi|421199231|ref|ZP_15656395.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC109]
gi|421456054|ref|ZP_15905397.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-123]
gi|421632844|ref|ZP_16073487.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-13]
gi|421805171|ref|ZP_16241064.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-694]
gi|395523737|gb|EJG11826.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC137]
gi|395565198|gb|EJG26846.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC109]
gi|400211152|gb|EJO42115.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-123]
gi|400393133|gb|EJP60179.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-81]
gi|408707563|gb|EKL52846.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-13]
gi|410409769|gb|EKP61693.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-694]
Length = 473
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 187/421 (44%), Positives = 260/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWPSPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|226951456|ref|ZP_03821920.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
gi|226837804|gb|EEH70187.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
Length = 473
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 183/421 (43%), Positives = 264/421 (62%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G++ +YVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRNEGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII RAN+ GE+ L+ R+ D ADL C+ P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIARANENGESIQQLTARFIDAMNEDAADLGCVAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI+ ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MISTLVNKGAAYPASNGDVYFEVSKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEATTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A A+ Y + + +Q+ ++ + + + F+ M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFK-------AYQQVYGQKTVDALEQSFVER----FNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ +Q + L +LR++ N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQAEQAMVLYSTLRQLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|89075764|ref|ZP_01162152.1| cysteinyl-tRNA synthetase [Photobacterium sp. SKA34]
gi|89048496|gb|EAR54071.1| cysteinyl-tRNA synthetase [Photobacterium sp. SKA34]
Length = 460
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 228/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE FTPI GK+GMYVCGVT YDL H+GH R VSFD++ RYL + ++
Sbjct: 2 LKIYNSLTRQKEAFTPIQPGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+ RN TD+DDKII+RA + GE+ SL+ R E D L P +PR + + +I
Sbjct: 62 TFARNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALGMKRPDVEPRATQFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I AYV GDV F V K +YGRLS Q L+ +AG RV +D KR+P DF
Sbjct: 122 IALCERLIERGFAYVASNGDVMFEVSKYEDYGRLSKQDLDQLQAGARVDIDMAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y P +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLNHYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y +L+ + ++ AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTSLRGLDTSIEAAGGEEFVARFKEAMDDDFN 351
>gi|212703175|ref|ZP_03311303.1| hypothetical protein DESPIG_01217 [Desulfovibrio piger ATCC 29098]
gi|212673441|gb|EEB33924.1| cysteine--tRNA ligase [Desulfovibrio piger ATCC 29098]
Length = 483
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 194/426 (45%), Positives = 267/426 (62%), Gaps = 15/426 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++T++KE F P+ GKV MYVCG+TAYD H+GHAR+A+ FD+L R+L L +V
Sbjct: 1 MQLYNTLTRKKEEFVPVRPGKVNMYVCGITAYDYCHIGHARSALVFDVLVRHLRALGLDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKIIRRAN+ + + Y + DM L + ++PR +++++Q+
Sbjct: 61 TFVRNFTDVDDKIIRRANEEKRDWREVGQTYIDAFHEDMDRLNVVRADHEPRATEYIQQM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+D+ +++I AY V GDV+F V P YG+LSG+ L+ +AG RVA K++P DF
Sbjct: 121 QDLCSELIAQGKAYAVPSGDVYFRVRAYPPYGKLSGRSLDELQAGARVAPGEEKQDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEP W+SPWG GRPGWHIECSAMS YL DIHGGG DLIFPHHENEIAQ
Sbjct: 181 ALWKAAKPGEPFWESPWGKGRPGWHIECSAMSKEYLP--LDIHGGGQDLIFPHHENEIAQ 238
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AAC +W+HNG V N EKMSKSLGNF TIR I Y P LR FL+ HYRSP
Sbjct: 239 TEAACSCQLARFWVHNGFVQVNAEKMSKSLGNFKTIRDILASYLPETLRFFLLGKHYRSP 298
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE----F 373
++++ +D + A+ IY+ C++ E K +++ A+ I K DE F
Sbjct: 299 IDFTADIMDESEKALQRIYE----CQLEAGKALERAKWKKVDLPAD--ILKEWDEHGQGF 352
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
+A + DD+NT+ L F ++ +N L K + + L+E + N+ L
Sbjct: 353 NAALDDDVNTAQALGHIFSQ-VRLVNRVLED-KALRAGEGARRLLEEFFERHNDWSAQLG 410
Query: 434 ILGLLP 439
+ G P
Sbjct: 411 LFGQDP 416
>gi|28897924|ref|NP_797529.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
gi|260364387|ref|ZP_05777025.1| cysteine--tRNA ligase [Vibrio parahaemolyticus K5030]
gi|260877081|ref|ZP_05889436.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
gi|260895742|ref|ZP_05904238.1| cysteine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
gi|417320155|ref|ZP_12106701.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
gi|31076996|sp|Q87QJ9.1|SYC_VIBPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|28806138|dbj|BAC59413.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
gi|308088338|gb|EFO38033.1| cysteine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
gi|308093754|gb|EFO43449.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
gi|308115166|gb|EFO52706.1| cysteine--tRNA ligase [Vibrio parahaemolyticus K5030]
gi|328473118|gb|EGF43966.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
Length = 460
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 190/421 (45%), Positives = 261/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R + D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCESLTERLIGDMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ +++ F A M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLNAAP-----------AGGEEYVSR----FTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +E ++ ++E+ ++G+
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKTES--------VEKASELGALMRELADVIGI 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|169796523|ref|YP_001714316.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|213156364|ref|YP_002318784.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|215483986|ref|YP_002326211.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
gi|301346200|ref|ZP_07226941.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB056]
gi|301510179|ref|ZP_07235416.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB058]
gi|301594397|ref|ZP_07239405.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB059]
gi|332853945|ref|ZP_08435065.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332870201|ref|ZP_08439096.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013113]
gi|417572308|ref|ZP_12223162.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC-5]
gi|421644195|ref|ZP_16084680.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-235]
gi|421657702|ref|ZP_16097952.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-83]
gi|421700456|ref|ZP_16139970.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-58]
gi|421799698|ref|ZP_16235688.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC1]
gi|226735042|sp|B7GWA1.1|SYC_ACIB3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735043|sp|B7IBU3.1|SYC_ACIB5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558611|sp|B0VAU1.1|SYC_ACIBY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169149450|emb|CAM87336.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|213055524|gb|ACJ40426.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|213985743|gb|ACJ56042.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
gi|332728301|gb|EGJ59682.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332732368|gb|EGJ63625.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013113]
gi|400207876|gb|EJO38846.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC-5]
gi|404569987|gb|EKA75070.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-58]
gi|408506006|gb|EKK07722.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-235]
gi|408711688|gb|EKL56889.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-83]
gi|410409239|gb|EKP61172.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC1]
Length = 473
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 186/421 (44%), Positives = 260/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ER+ V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERIDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|440757694|ref|ZP_20936876.1| Cysteinyl-tRNA synthetase [Pantoea agglomerans 299R]
gi|436428589|gb|ELP26244.1| Cysteinyl-tRNA synthetase [Pantoea agglomerans 299R]
Length = 461
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 258/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L ++
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ +L+NR E D A L LPP +PR + H+ +I
Sbjct: 62 NYVRNITDIDDKIIKRANENGESIETLTNRMIGEMHNDFAALGILPPDEEPRATRHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V +YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELVEKLIARGHAYVADNGDVMFDVLSDTDYGALSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KA EP+W SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKADEPAWSSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY L+ A A+ +Y L+ + ++ PA+ + F + M
Sbjct: 302 LNYGEDNLNQARAALERLYTALRHTDSSM-------------PASGG--DAFEARFRSAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + S + ++++E+ +LG+
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRLKSEDGA--------SAHALASKLREMANVLGI 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|260596903|ref|YP_003209474.1| cysteinyl-tRNA synthetase [Cronobacter turicensis z3032]
gi|260216080|emb|CBA28825.1| Cysteinyl-tRNA synthetase [Cronobacter turicensis z3032]
Length = 461
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 232/350 (66%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+M++QKE F PI G+VGMYVCG+T YDL H+GH R ++FD++ RYL L ++
Sbjct: 2 LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVAEMHNDFDALNILRPESEPRATQHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q+I AYV GDV FAVE +YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + +++ AR A +D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDRSVAAAGGEAFEARFIEAMDDDFN 351
>gi|417839754|ref|ZP_12485924.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19107]
gi|341951855|gb|EGT78407.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19107]
Length = 459
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 256/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTVQSAVAF-----------GGENFVATFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|417957999|ref|ZP_12600916.1| cysteine--tRNA ligase [Neisseria weaveri ATCC 51223]
gi|343967391|gb|EGV35636.1| cysteine--tRNA ligase [Neisseria weaveri ATCC 51223]
Length = 470
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 189/388 (48%), Positives = 244/388 (62%), Gaps = 27/388 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 2 LNIYNTLTRQKEEFIPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRAQGYPL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + GE L+ R+ + D A L + P +P+ ++H++Q+
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTERFIRAMNEDAAALGVIRPDVEPKATEHVQQM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I+N AY + GDV++AV + YG+LSG+ L++ RAGERV VDS KR+P DF
Sbjct: 122 LGMIQRLIDNGKAYAADNGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDSFKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP+W+SPWG GRPGWHIECSAMS FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWESPWGQGRPGWHIECSAMSEELFGDTFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAA----CQ---------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 304
SC A C +S+V YW+HNG + +NEKMSKSLGNFFTI ++ E+Y
Sbjct: 242 SCGAHGGSCGHNRSGGKAIESHVKYWLHNGFIRVDNEKMSKSLGNFFTICEVLEKYDAEV 301
Query: 305 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED 364
+R F++ AHYRSPLNYS LD A A+ +Y L++ +P E A +
Sbjct: 302 VRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTALKN-----TPPAEF--------AVSE 348
Query: 365 CINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F A M+DD T + F+
Sbjct: 349 NANDYTRRFFASMNDDFGTVEAMAVLFE 376
>gi|145629045|ref|ZP_01784844.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
gi|144978548|gb|EDJ88271.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
Length = 414
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 256/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVVF-----------GGENFVETFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTEDA--------EKANGLAARLRELGAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|400288066|ref|ZP_10790098.1| cysteinyl-tRNA ligase [Psychrobacter sp. PAMC 21119]
Length = 486
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 198/436 (45%), Positives = 266/436 (61%), Gaps = 19/436 (4%)
Query: 9 TVAAPKMDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLY 68
T K L L Y+S+T K+ F P+ GKVGMYVCG+T YD H+GHAR V++D++
Sbjct: 2 TTPLAKARLGLTNYDSLTASKQYFEPLDAGKVGMYVCGMTIYDYCHIGHARIMVAYDVIS 61
Query: 69 RYLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQ 128
R+L L EV YVRN TD+DDKII RA + E L+ R+ D L C+PP +
Sbjct: 62 RWLRQLGYEVNYVRNITDIDDKIINRAAENNEPINELTERFITAMHDDELALGCIPPNQE 121
Query: 129 PRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAV 187
PR +D++++++D+I ++ AY +GDV++AV+ YG+LS + L+ +AG RV V
Sbjct: 122 PRATDYIDEMQDIIETLVAGSYAYAGNKGDVYYAVDSFAGYGKLSKRNLDEMQAGSRVEV 181
Query: 188 DSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLI 247
++ KRNP DF LWKAAK GEP W SPWG GRPGWHIECSAMS L + FDIHGGG DL
Sbjct: 182 ENDKRNPFDFVLWKAAKPGEPQWASPWGQGRPGWHIECSAMSTKCLGNTFDIHGGGHDLQ 241
Query: 248 FPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 307
FPHHENEIAQS A+ WMH G + + EKMSKSLGNFFTIR + +YH +R+
Sbjct: 242 FPHHENEIAQSEASTGCKYARNWMHVGFINVDGEKMSKSLGNFFTIRDVMAKYHSETVRY 301
Query: 308 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
FL+S+HYRS +N+S + LD A +++ +Y TL+ E Q+ G+T IN E IN
Sbjct: 302 FLLSSHYRSQVNFSDVALDEAHNSLSRLYNTLKIAE------QQKGQTLEIN---EHLIN 352
Query: 368 KLRDE-----FHARMSDDLNTS---HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 419
F M+DD NTS +L G +D K I S + K Q QQ +L +
Sbjct: 353 DAYSSDAGYFFIQAMNDDFNTSAATSVLFGLARDINKAIKSE-EVDKAWQWAQQLKALAQ 411
Query: 420 SLRKIENEVKEVLRIL 435
L ++ V + L+ +
Sbjct: 412 VLNILQQPVSQFLQAV 427
>gi|315923786|ref|ZP_07920016.1| cysteine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
gi|315622906|gb|EFV02857.1| cysteine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
Length = 465
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 183/406 (45%), Positives = 258/406 (63%), Gaps = 5/406 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN+MTQ+KE F PI GKV MY CG T Y+ H+G+AR + FD+L R+LE++ +V
Sbjct: 1 MKLYNTMTQRKEEFVPIEPGKVRMYSCGPTVYNYFHIGNARPFIVFDVLRRFLEYIGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTDVDDKII R+++ G ++++Y EY D L T PRVSD M +I
Sbjct: 61 TFVQNFTDVDDKIINRSHEEGCTAKEIADKYIAEYFKDADALGIRRATVHPRVSDTMPEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
M+ + + AY V G+V++AV++ P+YG+LSGQ + + AG R+ V+ K +P DFA
Sbjct: 121 IAMVKALEDRGLAYNVGGNVYYAVDRFPDYGKLSGQNVADLEAGARIDVNDEKHSPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP WDSPWG GRPGWHIECSAMS +L DIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKKAKPGEPYWDSPWGRGRPGWHIECSAMSRKFLGETIDIHGGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+C YW+HNG++ N+EKMSKS GNFFT+R I +Y +R F++ AHYRSP+
Sbjct: 241 EGSCGCEFARYWVHNGYININDEKMSKSKGNFFTVRDIAGKYDLEVVRMFMLMAHYRSPV 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L SA +A+ Y ++ + L+ E K + A + + ++ F A M+
Sbjct: 301 NFSDELLASAQNALERFYNA-KNQMIYLADHAEDRKPSPDEAAWIQSLTQYKNGFIAAMN 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 424
DDLNT+ + F+ + ++ L + PK + ++ R++
Sbjct: 360 DDLNTADAIAAMFE----LVRAANTALSESSPKSAVTAALKLFREL 401
>gi|313891890|ref|ZP_07825492.1| cysteine--tRNA ligase [Dialister microaerophilus UPII 345-E]
gi|313119665|gb|EFR42855.1| cysteine--tRNA ligase [Dialister microaerophilus UPII 345-E]
Length = 481
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 186/422 (44%), Positives = 261/422 (61%), Gaps = 12/422 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++ ++K++ PI GKV +YVCGVT Y+ H+G+AR AV++D++ RYLE++ V
Sbjct: 4 IKVYNTLKREKQILKPIEEGKVKIYVCGVTPYNHPHIGNARPAVTWDIIRRYLEYIGYHV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTDVDDKII +AN + ++S RY Y M L P VS HM I
Sbjct: 64 DFIQNFTDVDDKIINKANAEKSDWKTVSTRYIDAYFKVMDALHIRRADIYPYVSKHMGDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
DM+ +I AYV+ DV++ + +Y +LSG+++E+ AG RV V++ KRNP DFA
Sbjct: 124 IDMVKTLIEKGHAYVLGNDVYYDISTFKDYCKLSGRKVEDMLAGARVMVNTAKRNPGDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP W+SPWG GRPGWHIECS MS HYL + FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKGAKPGEPFWESPWGNGRPGWHIECSVMSTHYLGATFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V YW+HNG +T N+EKMSKSL NFF ++ + E+Y ALR+FL+S HYRSPL
Sbjct: 244 EGATGQKFVKYWLHNGFITINSEKMSKSLNNFFLVKDVLEKYSGDALRYFLLSTHYRSPL 303
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHAR 376
++S +L+ A + L+D + ++ N + + + +EF
Sbjct: 304 DFSDERLEEAEKNM----SKLKDVIARIKEMEKEDGKVETNESVSLKKAAARTIEEFRQA 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M+DD NT + TG D +K IN N + ++ ++IE+ + K +L ILG
Sbjct: 360 MNDDFNTG-LATGVLFDFVKDINIYYNAVNSGVAIDKE-AVIEA----KETFKTILDILG 413
Query: 437 LL 438
+L
Sbjct: 414 IL 415
>gi|386265553|ref|YP_005829045.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R2846]
gi|309972789|gb|ADO95990.1| Cysteinyl-tRNA synthetase [Haemophilus influenzae R2846]
Length = 459
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 256/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + F M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVVF-----------GGEN----FAETFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------VEKANGLAVRLRELGAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|330830124|ref|YP_004393076.1| Cysteinyl-tRNA synthetase [Aeromonas veronii B565]
gi|423209170|ref|ZP_17195724.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER397]
gi|328805260|gb|AEB50459.1| Cysteinyl-tRNA synthetase [Aeromonas veronii B565]
gi|404619015|gb|EKB15935.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER397]
Length = 458
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 195/427 (45%), Positives = 261/427 (61%), Gaps = 21/427 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YD H+GH R V+FD++ RYL + ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + L+ R + D L + P +PR + H+E+I
Sbjct: 62 TYVRNITDVDDKIIKRAAETRVTCDELTERLIGDMHADFDALGMVRPDIEPRATQHIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++ + AYV + GDV F VE +YG+LSGQ LE +AG RV V KRNP DF
Sbjct: 122 IELVQSLLEKEHAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK--------- 368
LNYS L A A+ +Y L+D VA + + + AR A +D N
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPVAAAAGGDE-QVARFKEAMDDDFNTPEAYSALFD 360
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
L E + + ++D+ ++ A L+ + + L +L QQ + + EV
Sbjct: 361 LVREINRQKAEDM----VVAAALGARLRELGAVLGIL------QQDPEAFLKGDEADEEV 410
Query: 429 KEVLRIL 435
E+ R++
Sbjct: 411 AEIERLI 417
>gi|261493400|ref|ZP_05989926.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261496665|ref|ZP_05993045.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261307868|gb|EEY09191.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261311044|gb|EEY12221.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 469
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 203/433 (46%), Positives = 257/433 (59%), Gaps = 35/433 (8%)
Query: 16 DLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLK 75
D LKIYN++ ++KE F PI +VGMYVCGVT YDL H GH R VSFD++ RYL +
Sbjct: 9 DFMLKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSG 68
Query: 76 CEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHM 135
+ YVRN TDVDDKII+RA + E L +R E D L L P +PR + H+
Sbjct: 69 YNLRYVRNITDVDDKIIKRALENNETCDELVDRMIAEMHKDFDALNILRPDVEPRATKHI 128
Query: 136 EQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNP 194
+I M+ ++I+N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP
Sbjct: 129 PEIIAMVEKLIHNGHAYVAADGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKSIKKNP 188
Query: 195 ADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
DF LWK +KAGEPSW+SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENE
Sbjct: 189 MDFVLWKMSKAGEPSWESPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENE 248
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQSC A V+YW+H G +T + EKMSKSLGNFF+IR + Y +LR+F ++AHY
Sbjct: 249 IAQSCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFLTAHY 308
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPF-QEHGKTARINPAAEDCINKLRDEF 373
RS L+YS+ LD A A+ +Y L+ C+V+ EH A F
Sbjct: 309 RSLLDYSIDNLDLARSALERLYTALRGCDVSGEAIGGEHYVEA----------------F 352
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVL 432
M DD NT L F+ I LN LK + K L++ +KE+
Sbjct: 353 KTAMDDDFNTPGALAVLFE-----IARELNKLKTEDMAKANGLAV---------RLKELA 398
Query: 433 RILGLLP--PGAY 443
+LGLL P A+
Sbjct: 399 GVLGLLEQDPDAF 411
>gi|270263639|ref|ZP_06191908.1| cysteinyl-tRNA synthetase [Serratia odorifera 4Rx13]
gi|270042523|gb|EFA15618.1| cysteinyl-tRNA synthetase [Serratia odorifera 4Rx13]
Length = 461
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 250/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCGVT YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + GE+ L+ R E D L P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIRRATENGESCDQLTARMLAEMHADFDSLLIERPDQEPRATQHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I+ D AYV GDV F+++ P YG LS Q L+ +AG RV +D KRNP DF
Sbjct: 122 IEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ G A PA + F M
Sbjct: 302 LNYSEENLKQARTALERLYTALR------------GTDANAQPAGGEAFEA---RFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + + + + E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSALFD-----LAREVNRLKGED--------MAAANGLAAELRKLAKVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|375265152|ref|YP_005022595.1| cysteinyl-tRNA synthetase [Vibrio sp. EJY3]
gi|369840473|gb|AEX21617.1| cysteinyl-tRNA synthetase [Vibrio sp. EJY3]
Length = 460
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 190/421 (45%), Positives = 261/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFITEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ +++ F M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLKAAP-----------AGGEEYVSR----FTNAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +E ++ ++E+ ++G+
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKTES--------VEKASELGALMRELADVIGI 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|93005831|ref|YP_580268.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
gi|109894926|sp|Q1QC19.1|SYC_PSYCK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|92393509|gb|ABE74784.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
Length = 488
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 198/439 (45%), Positives = 265/439 (60%), Gaps = 40/439 (9%)
Query: 9 TVAAPKMDLT--LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDL 66
T+ P D L IY+S+T +K+ F P+ GKVGMYVCG+T YD H+GHAR V FD+
Sbjct: 2 TMTTPLADAMSQLVIYDSLTGRKQAFKPLATGKVGMYVCGMTVYDYCHIGHARVMVGFDM 61
Query: 67 LYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPT 126
R+L L +V YVRN TD+DDKII RA + GE +L+ R+ D L CL P
Sbjct: 62 AVRWLAQLGYDVNYVRNITDIDDKIITRAAENGEEIGTLTQRFITAMHEDATALGCLSPD 121
Query: 127 YQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERV 185
+PR +DH+++++ MI +++ND AY + GDV++AV+ +YG+LS + L++ +AG RV
Sbjct: 122 AEPRATDHIDEMQQMIETLVSNDYAYAGDNGDVYYAVDSFADYGKLSKRNLDDMQAGSRV 181
Query: 186 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 245
V++ KRNP DF LWKAAK EP W S WG GRPGWHIECSAMS L + FDIHGGG D
Sbjct: 182 EVENDKRNPFDFVLWKAAKPDEPQWASAWGQGRPGWHIECSAMSTKCLGNTFDIHGGGHD 241
Query: 246 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 305
L FPHHENEIAQS AA WMH G + + EKMSKSLGNFFTIR + +Y P +
Sbjct: 242 LQFPHHENEIAQSEAATGCEYARNWMHVGFINVDGEKMSKSLGNFFTIRDVMAKYLPETV 301
Query: 306 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT-----ARINP 360
R FL+S+HYRS +N+S LD + +++ +YQ L+ E Q+ GK A IN
Sbjct: 302 RFFLLSSHYRSQVNFSDSALDESHNSLSRLYQALKVAE------QQKGKVLIIDEALINN 355
Query: 361 AAEDCINKLRDEFHARMSDDLNTSHILTGAF------------QDA---------LKFIN 399
A + + +F M+DD N+S ++ F QD LK +
Sbjct: 356 AYASAVGQ---DFIKAMNDDFNSSTAISVLFGLARDINKASKAQDVETAWQLAQHLKALA 412
Query: 400 SSLNMLKKKQPKQQQLSLI 418
+LN+L +QP QQ L +
Sbjct: 413 QTLNIL--QQPVQQFLQAV 429
>gi|333925975|ref|YP_004499554.1| cysteinyl-tRNA synthetase [Serratia sp. AS12]
gi|333930928|ref|YP_004504506.1| cysteinyl-tRNA synthetase [Serratia plymuthica AS9]
gi|386327799|ref|YP_006023969.1| cysteinyl-tRNA synthetase [Serratia sp. AS13]
gi|333472535|gb|AEF44245.1| cysteinyl-tRNA synthetase [Serratia plymuthica AS9]
gi|333490035|gb|AEF49197.1| cysteinyl-tRNA synthetase [Serratia sp. AS12]
gi|333960132|gb|AEG26905.1| cysteinyl-tRNA synthetase [Serratia sp. AS13]
Length = 461
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 250/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCGVT YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + GE+ L+ R E D L P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIRRATENGESCDQLTARMLAEMHADFDSLLIERPDQEPRATQHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I+ D AYV GDV F+++ P YG LS Q L+ +AG RV +D KRNP DF
Sbjct: 122 IEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ G A PA + F M
Sbjct: 302 LNYSEENLKQARTALERLYTALR------------GTDANAQPAGGEAFEA---RFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + + + + E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSALFD-----LARDVNRLKGED--------MAAANGLAAELRKLAKVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|417840824|ref|ZP_12486932.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19501]
gi|341950635|gb|EGT77222.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19501]
Length = 459
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 256/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++A YRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAQYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGENFVEAFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|269140042|ref|YP_003296743.1| cysteinyl-tRNA synthetase [Edwardsiella tarda EIB202]
gi|387868556|ref|YP_005700025.1| cysteinyl-tRNA synthetase [Edwardsiella tarda FL6-60]
gi|267985703|gb|ACY85532.1| cysteinyl-tRNA synthetase [Edwardsiella tarda EIB202]
gi|304559869|gb|ADM42533.1| Cysteinyl-tRNA synthetase [Edwardsiella tarda FL6-60]
Length = 461
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 198/421 (47%), Positives = 249/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCGVT YDL H+GH R V FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVCFDVVARYLRYLGYRL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E+ L+ R E D L P +PR + H+ +I
Sbjct: 62 KYVRNVTDVDDKIIKRALENKESCEQLTERMLAEMHRDFDALNIARPDVEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I D AYV GDV FAV+ P+YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IALVEQLIARDHAYVASNGDVMFAVDTDPDYGVLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGAYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + A P + TAR F A M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDAAAQPAADETFTAR---------------FRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + Q + +++ + +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REINRLKGEDMAQAS--------ALAAQMRGLAHVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|419173997|ref|ZP_13717852.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7B]
gi|378037315|gb|EHV99843.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7B]
Length = 461
Score = 367 bits (942), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GEN ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGENFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|345429845|ref|YP_004822963.1| cysteinyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
gi|301155906|emb|CBW15375.1| cysteinyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
Length = 459
Score = 367 bits (942), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 257/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI GKVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEVFKPIHEGKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q L+ +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLDQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + + E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTD-----------QSAVALGGENFVEAFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTEDA--------EKANGLAARLRELAGILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|304395563|ref|ZP_07377446.1| cysteinyl-tRNA synthetase [Pantoea sp. aB]
gi|304356857|gb|EFM21221.1| cysteinyl-tRNA synthetase [Pantoea sp. aB]
Length = 461
Score = 367 bits (942), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 258/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L ++
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ +L+NR E D A L LPP +PR + H+ +I
Sbjct: 62 NYVRNITDIDDKIIKRANENGESIETLTNRMIGEMHNDFAALGILPPDEEPRATRHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V +YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELVEKLIARGHAYVADNGDVMFDVLSDTDYGALSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KA EP+W SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKADEPAWSSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY L+ A A+ +Y L+ + ++ PA+ + F + M
Sbjct: 302 LNYGEDNLNQARAALERLYTALRHTDSSV-------------PASGG--DAFEARFRSAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + S + ++++E+ +LG+
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRLKSEDGA--------SAHALASKLREMANVLGI 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|383457378|ref|YP_005371367.1| cysteinyl-tRNA synthetase [Corallococcus coralloides DSM 2259]
gi|380732503|gb|AFE08505.1| cysteinyl-tRNA synthetase [Corallococcus coralloides DSM 2259]
Length = 489
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 192/433 (44%), Positives = 260/433 (60%), Gaps = 23/433 (5%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+++++N+M+ QKE P+V G+V +YVCG T Y H+G+AR SFD++ RYL + +
Sbjct: 5 SIRLFNTMSMQKEPLEPLVPGEVKVYVCGPTVYSYIHIGNARTFTSFDVVVRYLRYRGFK 64
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN+TDVDDKII+ A++ GE P+ L++R+ + + D L P PRVS+ + +
Sbjct: 65 VTYVRNYTDVDDKIIKAAHETGEAPVDLASRFVEAFREDARALHLREPDVSPRVSETIPE 124
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I +I +++ AY +GDV+FAV+K +Y +LS + L++ GERV KR P DF
Sbjct: 125 IVAIIQTLVDKGYAYEAKGDVYFAVDKDEDYAKLSKRNLDDLCQGERVQPGDLKRQPLDF 184
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSWDSPWG GRPGWHIECSAMS +L FDIHGG +DLIFPHHENEIAQ
Sbjct: 185 ALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSEKFLGRTFDIHGGALDLIFPHHENEIAQ 244
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S +A + YWMH G + KMSKSLGN +R + ALR F +S HYR P
Sbjct: 245 SESATGQTMAKYWMHCGFLDLEGAKMSKSLGNVVRLRDALAKVDAEALRFFFLSTHYRHP 304
Query: 318 LNYSVLQLDSASDAVFYIYQTLQ--DCEVALSPFQE---HGKTARINPAAEDCINKLRDE 372
LN+ L A + Y Y+TL+ D VA F + HG+ AR E
Sbjct: 305 LNFGEKALQDAEGRMEYFYETLRKVDERVAGKDFGKGPLHGEPAR-----------FLTE 353
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F + M DD NT+ L GA F+N L K P + + + +L+ + +V+E
Sbjct: 354 FESAMDDDFNTAGAL-GALSGLFGFMNE----LTDKPPVKDKPLVGRTLQALREQVRETS 408
Query: 433 RILGLLP--PGAY 443
R+LGL PGA+
Sbjct: 409 RVLGLFEDDPGAW 421
>gi|121535688|ref|ZP_01667492.1| cysteinyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
gi|121305719|gb|EAX46657.1| cysteinyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
Length = 370
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 182/370 (49%), Positives = 244/370 (65%), Gaps = 5/370 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L++YN++T+QKE F P GKV MYVCGVT Y+ H+G+AR +++D++ RYLEH
Sbjct: 1 MALRVYNTLTKQKEEFVPREPGKVKMYVCGVTPYNHPHIGNARPFITWDVIRRYLEHRGF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V +V+NFTD+DDKII AN G +++NRY Y M L PRVSDH+
Sbjct: 61 AVFHVQNFTDIDDKIINTANQEGVTWDTIANRYIAAYFEVMDKLNVRRAHVYPRVSDHIG 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I ++ ++I+ AY V GDV+++VEK YG+LSG+ LE+ +AG R+ VD RKR+P D
Sbjct: 121 DIIAIVQRLIDKGYAYTVGGDVYYSVEKFAPYGQLSGRSLEDMKAGARIDVDERKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+AK GEP+WDSPWGPGRPGWHIECSAM+ YL + FD HGGG DLIFPHHENEIA
Sbjct: 181 FALWKSAKPGEPAWDSPWGPGRPGWHIECSAMALKYLGNGFDFHGGGSDLIFPHHENEIA 240
Query: 257 QSCAACQDSN-VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
QS A ++ V YW+HNG +T N EKMSKSLGNFF ++ I Y P LR F++S HYR
Sbjct: 241 QSEAYTGEAPFVRYWLHNGFITVNEEKMSKSLGNFFLVKDILAHYPPEVLRFFILSTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
SPL++S +L A ++ + + + ++ P G+ A + + EF+
Sbjct: 301 SPLDFSDERLAEAGRSLERLRTAVHNIRQLEKLPGGAGGEQA---DTVRRAAAQAKAEFY 357
Query: 375 ARMSDDLNTS 384
A M DD NT+
Sbjct: 358 AAMDDDFNTA 367
>gi|304413758|ref|ZP_07395202.1| Cysteinyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
gi|304283849|gb|EFL92243.1| Cysteinyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
Length = 506
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 184/375 (49%), Positives = 239/375 (63%), Gaps = 15/375 (4%)
Query: 10 VAAPKMDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYR 69
+ P+ + LKI+N++++QKE+F PI GK+GMYVCG+T YDL H+GH R V+FD++ R
Sbjct: 34 IEKPRNIIMLKIFNTLSRQKEIFRPIDAGKIGMYVCGITVYDLCHIGHGRTFVAFDVIVR 93
Query: 70 YLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQP 129
YL +L ++TYVRN TD+DDKII+RA + E L+ R E D L L P +P
Sbjct: 94 YLRYLDYDLTYVRNITDIDDKIIKRAAENNETCQQLTERMMIEMYRDFDALNILRPNEEP 153
Query: 130 RVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 188
+ + H+ +I +I ++I AY+ +GDV FAV+ +PNYG LS Q LEN +AG RVA+
Sbjct: 154 QATAHITEIIALIKKLIEGKHAYIAADGDVVFAVKSAPNYGLLSRQNLENLQAGARVAIA 213
Query: 189 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 248
K +P DF LWK A G+PSWDSPWG GRPGWHIECSAM+A L FDIHGGG DL+F
Sbjct: 214 DGKEDPMDFVLWKRALPGDPSWDSPWGAGRPGWHIECSAMNAKQLGRHFDIHGGGSDLLF 273
Query: 249 PHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHF 308
PHHENEIAQS A D V+YWMH G V KMSKSL NFFTIR + + Y +R+F
Sbjct: 274 PHHENEIAQSTCAHGDPYVNYWMHTGMVMVEKNKMSKSLNNFFTIRDLLDHYDAETVRYF 333
Query: 309 LISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK 368
L+SAHYRS L+YS L + A+ +Y L+ + +TA A E+ +
Sbjct: 334 LMSAHYRSQLDYSEENLRQSRIALERLYIALRGTD----------ETASAAAAGENFEKR 383
Query: 369 LRDEFHARMSDDLNT 383
RD M DD NT
Sbjct: 384 FRDA----MDDDFNT 394
>gi|336249110|ref|YP_004592820.1| cysteinyl-tRNA synthetase [Enterobacter aerogenes KCTC 2190]
gi|334735166|gb|AEG97541.1| cysteinyl-tRNA synthetase [Enterobacter aerogenes KCTC 2190]
Length = 461
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 182/350 (52%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHTDFDALNILRPDNEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEQLIARGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + + P AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSAQPAGGEAFEARFIEAMDDDFN 351
>gi|404379151|ref|ZP_10984218.1| cysteinyl-tRNA synthetase [Simonsiella muelleri ATCC 29453]
gi|294483496|gb|EFG31181.1| cysteinyl-tRNA synthetase [Simonsiella muelleri ATCC 29453]
Length = 475
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 189/393 (48%), Positives = 240/393 (61%), Gaps = 28/393 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 2 LYLYNTLTRQKERFEPIDPKNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGYPL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RAN GE L+ R+ Q D L L P +P+ ++H+ Q+
Sbjct: 62 TYVRNITDIDDKIIARANQNGETIQQLTERFIQAMNEDSQALGVLRPDIEPKATEHIAQM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I N AY E GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF
Sbjct: 122 IQMIEKLIENGKAYPAENGDVYYAVREFDAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EPSW SPWG GRPGWHIECSAM FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPEEPSWASPWGNGRPGWHIECSAMGGELFGQTFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAA----CQ------------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYH 301
SC A C DS+V YW+HNG + +NEKMSKSLGNFFTIR + ++Y
Sbjct: 242 SCGANGGLCGHNKPVSGSLKKIDSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVLKKYQ 301
Query: 302 PLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPA 361
P +R F++ AHYRSPLNYS LD A +++ +Y TL + + +G
Sbjct: 302 PEVVRFFILRAHYRSPLNYSDAHLDDAKNSLTRLYNTLNNVKPIEFKLDSNGNN------ 355
Query: 362 AEDCINKLRDEFHARMSDDLNTSHILTGAFQDA 394
N +F M+DD T+ ++ F+ A
Sbjct: 356 -----NDYTHKFFNAMNDDFGTAEAVSVLFEIA 383
>gi|421782075|ref|ZP_16218534.1| cysteine--tRNA ligase [Serratia plymuthica A30]
gi|407755631|gb|EKF65755.1| cysteine--tRNA ligase [Serratia plymuthica A30]
Length = 461
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 250/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCGVT YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + GE+ L+ R E D L P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIRRATENGESCDQLTARMLAEMHADFDSLLIERPDQEPRATQHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I+ D AYV GDV F+++ P YG LS Q L+ +AG RV +D KRNP DF
Sbjct: 122 IEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ G A PA + F M
Sbjct: 302 LNYSEENLKQARTALERLYTALR------------GTDANAQPAGGEAFEA---RFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + + + + E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSALFD-----LARDVNRLKGED--------MAAANGLAAELRKLAKVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|312885230|ref|ZP_07744908.1| cysteinyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367089|gb|EFP94663.1| cysteinyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 459
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 192/457 (42%), Positives = 272/457 (59%), Gaps = 20/457 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GK+GMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII RAN+ E+ +L+ R E D L P +P+ ++++++I
Sbjct: 62 TFVRNITDIDDKIITRANENNESCEALTERLIGEMHRDFDALNMKRPDIEPKATEYIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V+K YG+LS Q L+ +AG RV V+S KR+P DF
Sbjct: 122 IQLVEKLIERGFAYVADNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVESAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDSETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK--------- 368
LNYS L+ A + +Y +L+ ++ + +R A D N
Sbjct: 302 LNYSEENLNQARAGLERLYTSLRGLDLTVPAADGEEYVSRFTEAMNDDFNTPEAYSVLFD 361
Query: 369 -LRDEFHARMSDDLNTSHI--LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 425
R+ + +D+ + S + L D + ++ + + Q++ IE+L K+
Sbjct: 362 MAREINRVKATDNEHASALGSLLRELADVIGILHQDPEAFLQGSDDKDQVAEIEALIKLR 421
Query: 426 NEVKEVLRILGLLPPGAYSEVKTAFLVLLHVFFDDSP 462
N+ + A ++V L + + +D P
Sbjct: 422 NDSRAA-------KDWATADVARDKLTAMGIVLEDGP 451
>gi|374289282|ref|YP_005036367.1| cysteinyl-tRNA synthetase [Bacteriovorax marinus SJ]
gi|301167823|emb|CBW27408.1| cysteinyl-tRNA synthetase [Bacteriovorax marinus SJ]
Length = 487
Score = 367 bits (941), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 174/393 (44%), Positives = 250/393 (63%), Gaps = 3/393 (0%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++LKIYN++++ KE F P+V GKV +Y+CG T YDL H+G+ R A++F+L+ +LE
Sbjct: 1 MSLKIYNTLSRSKEEFKPLVEGKVKLYLCGPTVYDLLHIGNFRGAITFNLVRNWLELSGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+V N+TDVDDKII+RAND G P+ +S +Y E+ D L T+ P+V++ M+
Sbjct: 61 DVTFVYNYTDVDDKIIKRANDEGVEPIVISEKYIAEFEKDFNRLGLKKHTHNPKVTEFMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I + + +I ND AY ++G+VF+A++ +YG+LS + L+ AG+RV VDSRKRNP D
Sbjct: 121 EIINYVETLIKNDKAYEIDGEVFYAIDNYTDYGKLSKKNLDELNAGQRVEVDSRKRNPYD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +K GEP W SPWG GRPGWHIECSAM L DIHGGGIDLIFPHHENEIA
Sbjct: 181 FVLWKPSKEGEPHWTSPWGEGRPGWHIECSAMIKAILGETIDIHGGGIDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q +YWMHN + +EKMSKSLGN T R ++YHP L+ ++SAHYRS
Sbjct: 241 QGEGCNCTKYCNYWMHNEFINLKDEKMSKSLGNVITGRAFMDQYHPEVLKFLMLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
N + ++ + +Y+TL + L F E ++ ++N + + +
Sbjct: 301 NFNVTDEKIHQVISGLRRVYETLATVDTILDTF-EKSESGKVNKNFQTTLTNSDAKIKKS 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQ 409
+ DD +T+ ++ F+ F + LN+LKKK+
Sbjct: 360 LDDDFSTAEVVATIFEVVRTF--NGLNLLKKKK 390
>gi|424060453|ref|ZP_17797944.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab33333]
gi|404668405|gb|EKB36314.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab33333]
Length = 473
Score = 367 bits (941), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 186/421 (44%), Positives = 259/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++ AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVTKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|392309602|ref|ZP_10272136.1| cysteinyl-tRNA synthetase [Pseudoalteromonas citrea NCIMB 1889]
Length = 459
Score = 367 bits (941), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 192/391 (49%), Positives = 242/391 (61%), Gaps = 21/391 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++T+QK F P+V GKV MYVCG+T YD H+GHAR VSFD++ RY HL +V
Sbjct: 2 LQIYNTLTRQKTPFKPLVEGKVDMYVCGITIYDFCHVGHARTYVSFDVMNRYFRHLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E+ +L+ R + D L LP +P V+ HM++I
Sbjct: 62 TYVRNITDVDDKIIKRAAENNEDINALTVRMTKAMHEDFDALNILPADIEPTVTGHMDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+MI ++I AYV GDV F V YG+LS Q LE +AG RV V K +P DF
Sbjct: 122 IEMIERLITKGHAYVASSGDVLFDVSTFEQYGQLSQQNLEMLQAGARVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWTSPWGEGRPGWHIECSAMSSKHLGDFFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSLGNFFT+R++ ++Y +R+FLI+ YRS
Sbjct: 242 SCCANNGRYVNTWIHTGMVQVNKEKMSKSLGNFFTVREVLKKYDRETVRYFLINGQYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ IY L+ E P + + A N + F M
Sbjct: 302 LNYSQENLEQARASLERIYTALRGVE----PVE-------VTLAG----NSYVERFETAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK 408
+DD NT L F+ + +N+LK K
Sbjct: 347 NDDFNTPEALPVIFE-----LAKEVNLLKDK 372
>gi|377579972|ref|ZP_09808928.1| cysteinyl-tRNA synthetase [Escherichia hermannii NBRC 105704]
gi|377538721|dbj|GAB54093.1| cysteinyl-tRNA synthetase [Escherichia hermannii NBRC 105704]
Length = 461
Score = 367 bits (941), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 231/350 (66%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVAEMHKDFDALNILRPDNEPRATQHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q+I AYV GDV FAV+ +YG+LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEIVEQLIARGHAYVASNGDVMFAVDTDASYGQLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y P +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKFYDPETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ +V AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYIALRGTDVNAQAAGGEAFEARFVEAMDDDFN 351
>gi|402758353|ref|ZP_10860609.1| cysteinyl-tRNA ligase [Acinetobacter sp. NCTC 7422]
Length = 473
Score = 367 bits (941), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 186/421 (44%), Positives = 262/421 (62%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G++ MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII RAN+ GE+ L+ R+ Q D A+L C P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIARANENGESIQQLTARFIQAMNEDAANLGCAEPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI +++ AY GDV+F V K NYGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGTLVDKGAAYPAANGDVYFEVSKFNNYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A A+ Y + + + Q +G+ E + F+ M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFKAYQ------QVYGQ-----KTVETLEQGFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ +Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQAEQATMLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|170717373|ref|YP_001783468.1| cysteinyl-tRNA synthetase [Haemophilus somnus 2336]
gi|189082066|sp|B0UVH6.1|SYC_HAES2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|168825502|gb|ACA30873.1| cysteinyl-tRNA synthetase [Haemophilus somnus 2336]
Length = 459
Score = 367 bits (941), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 196/421 (46%), Positives = 254/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL +L E+
Sbjct: 2 LKIFNTLTREKEVFKPISENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYEL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKIIRRA + E L +R E D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIRRALENKETCEQLVDRMVVEMYKDFDALNVLRPDFEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F VE YG+LS Q L +AG RV + K+NP DF
Sbjct: 122 IALVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLTQLQAGARVEISEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW+SPWG GRPGWHIECSAM+ +L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWNSPWGAGRPGWHIECSAMNCKHLGEHFDIHGGGADLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 242 SCCAHGNRYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A A+ +Y L+ + + F A+ A M
Sbjct: 302 LNYSEENLDLAHGALERLYTALRGTDKSAVSFGGENFIAQFTEA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + ++ F+ A +N L K + K L LR E+ ILGL
Sbjct: 347 NDDFNTPNAISVLFEMA-----REINRL-KNEDKLLADGLAARLR-------ELASILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|59712207|ref|YP_204983.1| cysteinyl-tRNA synthetase [Vibrio fischeri ES114]
gi|71657967|sp|Q5E4F1.1|SYC_VIBF1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|59480308|gb|AAW86095.1| cysteinyl-tRNA synthetase [Vibrio fischeri ES114]
Length = 461
Score = 367 bits (941), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 193/423 (45%), Positives = 262/423 (61%), Gaps = 31/423 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIYNSLTRQKEEFKPITEGKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRFLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE +L+ R + D L P +PR ++++++I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGETCDALTERLIADMHADFDALNMKRPDVEPRATEYIKEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD--SRKRNPA 195
++ ++I AYV GDV F V+K YG LS Q LE +AG RV ++ S KR+
Sbjct: 122 IALVERLIERGFAYVASNGDVMFEVKKYDEYGCLSRQDLEQLQAGSRVTLEEASVKRSGM 181
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL+FPHHENEI
Sbjct: 182 DFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLMFPHHENEI 241
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYR
Sbjct: 242 AQSCCAHDTPYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLAHYDSETVRYFLMSGHYR 301
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
S LNYS L+ A ++ +Y +L+ +++++P E+ + + F
Sbjct: 302 SQLNYSEENLNQARASLERLYTSLRGLDLSVTP-----------AGGEEFVGR----FST 346
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F+ A +N LK + I++ K+ ++E+ +L
Sbjct: 347 AMNDDFNTPEAYSVLFEMA-----REVNRLKTEN--------IDTASKLGALMRELADVL 393
Query: 436 GLL 438
GLL
Sbjct: 394 GLL 396
>gi|383816533|ref|ZP_09971929.1| cysteinyl-tRNA synthetase [Serratia sp. M24T3]
gi|383294627|gb|EIC82965.1| cysteinyl-tRNA synthetase [Serratia sp. M24T3]
Length = 462
Score = 367 bits (941), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 196/421 (46%), Positives = 253/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R VSFD++ RYL L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV N TD+DDKII+RA + GE LS+R E D L L P +PR + H+ +I
Sbjct: 62 NYVCNITDIDDKIIKRAAENGEGFNDLSDRMIAEMHADFDSLGILRPDLEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q+I+ D AYV V GDV F+V PNYG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 VEIVQQLIDRDHAYVAVNGDVMFSVASDPNYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWNSPWGNGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+ WMH+G V + EKMSKSL NFFT+R + + Y ++R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNTWMHSGMVMIDREKMSKSLDNFFTVRDVLKYYDAESVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ G A PA + + F + M
Sbjct: 302 LNYSEENLKLARTSMERLYTALR------------GTDANAQPAGGE---EFEARFRSAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + P ++ + E++ + ILGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----RDINRLKSENP--------QAANGLAAELRRLAGILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|260557959|ref|ZP_05830171.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|260408469|gb|EEX01775.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|452949314|gb|EME54782.1| cysteinyl-tRNA ligase [Acinetobacter baumannii MSP4-16]
Length = 473
Score = 367 bits (941), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 186/421 (44%), Positives = 259/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++ AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVTKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATMLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|453062355|gb|EMF03346.1| cysteinyl-tRNA ligase [Serratia marcescens VGH107]
Length = 461
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 249/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCGVT YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIRRAAENHETCDQLTERMLAEMHADFDALLIDRPDQEPRATQHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I+ D AYV GDV F+++ P YG LS Q L+ +AG RV +D KRNP DF
Sbjct: 122 IEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWQSPWGPGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDKEKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + +P AR F M
Sbjct: 302 LNYSEENLKQARTALERLYTALRGTDADAAPAGGEAFEAR---------------FREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + + + I E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSALFD-----LAREVNRLKSED--------MAAANGIAAELRKLAKVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|414070586|ref|ZP_11406569.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. Bsw20308]
gi|410807040|gb|EKS13023.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. Bsw20308]
Length = 459
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 194/410 (47%), Positives = 246/410 (60%), Gaps = 24/410 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ IYN++T+QKE F P+V GK+ MYVCG+T YD H+GHAR V FD++ RYL H+ ++
Sbjct: 2 VNIYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ L+ R + D L L P +P V+ HM++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESINDLTVRMTKAMHEDFDSLNMLRPDIEPTVTSHMDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I AYV +GDV F V YG LS Q L ++G RV V K +P DF
Sbjct: 122 IVMVKRLIEKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSL NFFT+R++ + Y ++R+FLIS HYRS
Sbjct: 242 SCCANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKAYDAESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A ++ IY L+D E + N+ +F M
Sbjct: 302 LNYSQENLDQARSSLERIYTALRDVEPVECDLEG---------------NEFVAKFRKAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ-QLSLIESLRKIEN 426
DD NT L F+ + LN +K+ Q QL+ I LR I N
Sbjct: 347 DDDFNTPEALPVLFE-----LAKELNRVKESDVVQAGQLAFI--LRSIGN 389
>gi|422835304|ref|ZP_16883360.1| cysteinyl-tRNA synthetase [Escherichia coli E101]
gi|371612695|gb|EHO01202.1| cysteinyl-tRNA synthetase [Escherichia coli E101]
Length = 461
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P QPR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMQPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|169633852|ref|YP_001707588.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii SDF]
gi|229558610|sp|B0VS71.1|SYC_ACIBS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169152644|emb|CAP01639.2| cysteinyl-tRNA synthetase [Acinetobacter baumannii]
Length = 473
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 186/421 (44%), Positives = 260/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTMRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YW+H G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWIHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|378696150|ref|YP_005178108.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 10810]
gi|301168673|emb|CBW28264.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 10810]
Length = 459
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 255/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++P + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPHATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGENFVETFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTEDA--------EKANGLAARLRELGAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|421652216|ref|ZP_16092579.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC0162]
gi|425750916|ref|ZP_18868870.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-348]
gi|445457362|ref|ZP_21446507.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC047]
gi|408506489|gb|EKK08197.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC0162]
gi|425484701|gb|EKU51101.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-348]
gi|444776942|gb|ELX00979.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC047]
Length = 473
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 186/421 (44%), Positives = 259/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S + + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEVSTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQVTVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|406894538|gb|EKD39329.1| hypothetical protein ACD_75C00439G0007 [uncultured bacterium]
Length = 490
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 178/422 (42%), Positives = 262/422 (62%), Gaps = 5/422 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T++I+N+++ QKE+ I G V +YVCG+T+YD H+GHAR+A++FD++ YL++
Sbjct: 1 MTIRIHNTLSGQKEILQTIEPGHVKLYVCGITSYDYCHIGHARSALAFDMIVNYLKYRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRNFTD+DDKII RA + + L+ R+ E+ VDM L P +P+ ++H+
Sbjct: 61 KVTYVRNFTDIDDKIIARAKEQQTSSEELAARFINEFYVDMDRLGINRPDIEPKATEHIT 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ D+I +++ AY DV++ V+ P YG+LS + + +AG R++V+ +KRNP D
Sbjct: 121 EMIDLIGELVGKGKAYPSGNDVYYVVDSFPGYGKLSKRNPADMQAGARISVNEQKRNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +K GEP+W SPWGPGRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FVLWKGSKPGEPTWASPWGPGRPGWHIECSAMSRKYLGETFDIHGGGQDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + W+H+G VT +EKMSKSLGNF TIR I YHP LR F+ S HYR+
Sbjct: 241 QSEGANGKPFATTWIHHGFVTIRDEKMSKSLGNFLTIRDILSHYHPEILRFFIFSTHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL++S + A+ + +Y+ L + S ++ + + + + F
Sbjct: 301 PLDFSESAMQDATAGLERLYECLAAVDRLDSGKRDSALPSVLTENDLRQLKGMETRFQQA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M +D NT+ G F D +K S+N + +K P I+ L+ ++++ I+G
Sbjct: 361 MDNDFNTAQA-QGVFFDTVK----SINRICRKLPATPSAGDIQFLKNGAETLRKLADIMG 415
Query: 437 LL 438
+L
Sbjct: 416 IL 417
>gi|383763829|ref|YP_005442811.1| cysteinyl-tRNA synthetase [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381384097|dbj|BAM00914.1| cysteinyl-tRNA synthetase [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 469
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 186/385 (48%), Positives = 240/385 (62%), Gaps = 8/385 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L+IYN++T++ E F P+ GKV MYVCG T Y +H+GHA +A+ FD++ RYL +
Sbjct: 1 MALRIYNTLTRRVEEFVPLEPGKVKMYVCGPTVYADAHIGHAMSAIVFDMVRRYLLYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV +V NFTDVDDKIIRRA + G +PL L+N Y EYL + DL +P T PRVS M+
Sbjct: 61 EVKFVTNFTDVDDKIIRRAAEQGRDPLELANHYANEYLRHLKDLNVMPATVYPRVSTEMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I MI + AY ++GDV+F V K +YG+LSG+RLE AG R+ D+RK +PAD
Sbjct: 121 WITQMIAGLEEEGYAYRLDGDVYFRVTKDEDYGKLSGRRLEEALAGVRIEEDARKEHPAD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+AK GEP+WDSP+GPGRPGWHIECSAM H+L DIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKSAKPGEPAWDSPFGPGRPGWHIECSAMCLHHLGEVVDIHGGGNDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS + YWMH+G + EKMSKSLGN TI + +++ ALR + + HYR
Sbjct: 241 QSESYTGKPFARYWMHHGMLQLAGEKMSKSLGNLITIDEFLKKHSADALRLLIFTGHYRK 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+ YS ++SA ++L AL P Q T A R F
Sbjct: 301 PVVYSEEAIESAE-------RSLARLRSALRPPQGSVTTGEAADALRIATENARVAFVEA 353
Query: 377 MSDDLNTSHILTGAFQDALKFINSS 401
M DD NT+ + F+ A + INS+
Sbjct: 354 MDDDFNTAGAIAALFELA-RAINSA 377
>gi|411008777|ref|ZP_11385106.1| cysteinyl-tRNA ligase [Aeromonas aquariorum AAK1]
Length = 458
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 194/418 (46%), Positives = 253/418 (60%), Gaps = 27/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YD H+GH R V+FD++ RYL + ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYSGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + G L+ R + D L + P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIKRAAETGVTCDDLTERLIGDMHADFDALGMVRPDVEPRATQHIGEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +++ + AYV + GDV F V+ +YG+LSGQ LE +AG RV V KRNP DF
Sbjct: 122 IELVQSLLDKEHAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+D A + G ++ D F M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPAAAAA----GGDEQV------------DRFKEAM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
DD NT + F D ++ IN + K + +++ L E+ VL IL
Sbjct: 346 DDDFNTPEAYSALF-DLVREIN---------RQKGEDMAVAAGLGARLRELGAVLGIL 393
>gi|77360989|ref|YP_340564.1| cysteinyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
gi|109894923|sp|Q3IF51.1|SYC_PSEHT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|76875900|emb|CAI87121.1| cysteine tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
Length = 459
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 190/402 (47%), Positives = 244/402 (60%), Gaps = 22/402 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ IYN++T+QKE F P+V GK+ MYVCG+T YD H+GHAR V FD++ RYL H+ ++
Sbjct: 2 VNIYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RAN+ GE+ L+ R + D L L P +P V+ HM++I
Sbjct: 62 KYVRNITDVDDKIIKRANENGESINDLTVRMTKAMHEDFDSLNMLRPDVEPTVTAHMDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ ++I AYV +GDV F V YG LS Q L ++G RV V K +P DF
Sbjct: 122 IEMVERLITKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSL NFFT+R++ ++Y ++R+FLIS HYRS
Sbjct: 242 SCCANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKQYDAESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A ++ IY L+ E + N+ +F M
Sbjct: 302 LNYSQENLDQARSSLERIYTALRGVEPVACELDD---------------NEYVIKFRKAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ-QLSLI 418
DD NT L F+ + LN++K +Q QL+ I
Sbjct: 347 DDDFNTPEALPVLFE-----LAKELNLVKDIDSQQAGQLAFI 383
>gi|423207191|ref|ZP_17193747.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC34]
gi|404620258|gb|EKB17155.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC34]
Length = 458
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 195/418 (46%), Positives = 254/418 (60%), Gaps = 27/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YD H+GH R V+FD++ RYL + ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + L+ R + D L + P +PR + H+E+I
Sbjct: 62 TYVRNITDVDDKIIKRAAETRVTCDELTERLIGDMHADFDALGMVRPDIEPRATQHIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++ + AYV + GDV F VE +YG+LSGQ LE +AG RV V KRNP DF
Sbjct: 122 IELVQSLLEKEHAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+D A + + + AR A M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPAAAAAGGDE-QVARFKEA---------------M 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
DD NT + F D ++ IN + K + +++ +L E+ VL IL
Sbjct: 346 DDDFNTPEAYSALF-DLVREIN---------RQKGEDMAVAAALGARLRELGAVLGIL 393
>gi|444352744|ref|YP_007388888.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Enterobacter aerogenes
EA1509E]
gi|443903574|emb|CCG31348.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Enterobacter aerogenes
EA1509E]
Length = 461
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 182/350 (52%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDNEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEQLIARGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + + P AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSAQPAGGEAFEARFIEAMDDDFN 351
>gi|242398167|ref|YP_002993591.1| Cysteinyl-tRNA synthetase [Thermococcus sibiricus MM 739]
gi|242264560|gb|ACS89242.1| Cysteinyl-tRNA synthetase [Thermococcus sibiricus MM 739]
Length = 468
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 180/404 (44%), Positives = 246/404 (60%), Gaps = 3/404 (0%)
Query: 25 MTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNF 84
MT+QKE F P+ ++ MYVCG T YD +HLGHAR ++FD++ RYLEH V V NF
Sbjct: 1 MTKQKEEFKPLRDDEIRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHKGYTVLMVMNF 60
Query: 85 TDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQ 144
TD+DDKIIRRAN+ GE+P L+ ++ + +L DM L+ P PRV++H++ I + + +
Sbjct: 61 TDIDDKIIRRANETGEDPKELAEKFLKYFLEDMKALKVKPADIYPRVTEHIQDIIEFVRK 120
Query: 145 IINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAK 204
+ AY V+F V K YG+LS LE+ R G RV K+NP DFALWK AK
Sbjct: 121 LEEKGYAYGSSDGVYFEVRKYEKYGKLSKVNLEDLRKGVRVEPGEGKKNPEDFALWKKAK 180
Query: 205 AGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD 264
GEP W+SPWG GRPGWHIECS MS YL FDIHGGG DLIFPHHENEIAQ+ A
Sbjct: 181 PGEPKWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIAQTEACTGK 240
Query: 265 SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQ 324
V YW H G V + EKMSKSLGNF TIR++ +RY P +R F++ HYRSPL+Y+
Sbjct: 241 EWVKYWFHTGFVMVSGEKMSKSLGNFVTIRELLQRYSPEVIRFFVLQKHYRSPLDYTEEG 300
Query: 325 LDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTS 384
+ A + + +Y T+++ +A+ + K + + I + + + M DD NT+
Sbjct: 301 IQHAKNNLERLYNTIENIRIAMEKVEVPFKWEKEEFELYETIRDAKKKLYEAMDDDFNTA 360
Query: 385 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
+ F+ A +N+ L ++K PK+ L +I +EV
Sbjct: 361 EAMKPIFEVA-NAVNAYLTKVEK--PKESVLRKALEFFRIISEV 401
>gi|238795438|ref|ZP_04638953.1| Cysteinyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
gi|238720557|gb|EEQ12358.1| Cysteinyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
Length = 461
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 196/421 (46%), Positives = 250/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENSETCEQLTTRMLAEMHKDFDALNLQRPDLEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M ++I D AYV GDV FAV+ P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEMTERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWGPGRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWQSPWGPGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ + +P AR F A M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDANATPKGGAEFEAR---------------FRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + I + + E++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKTED--------ITAANGLAAELRKLAHVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|343506381|ref|ZP_08743870.1| cysteinyl-tRNA synthetase [Vibrio ichthyoenteri ATCC 700023]
gi|342802714|gb|EGU38117.1| cysteinyl-tRNA synthetase [Vibrio ichthyoenteri ATCC 700023]
Length = 460
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 193/418 (46%), Positives = 256/418 (61%), Gaps = 26/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GK+GMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCESLTERLIGEMHADFDALNMKRPDIEPRATEFIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV GDV F V K YG+LS Q L+ +AG RV V+S KR+P DF
Sbjct: 122 IALVEKLIERGFAYVASNGDVMFEVSKFDEYGKLSKQDLDQLQAGARVDVESAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWG GRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSAILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHNTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++++ R N A M
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDLSVEAAGGDEYQVRFNDA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+DD NT + F A +N LK + +Q +L + ++ EV+ IL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REINRLKTENIEQAS-----ALGVVMRQMAEVIGIL 394
>gi|410690165|ref|YP_006963884.1| Cysteinyl-tRNA synthetase [Salmonella sp. 40]
gi|389597466|gb|AFK90217.1| Cysteinyl-tRNA synthetase [Salmonella sp. 40]
Length = 463
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 180/352 (51%), Positives = 232/352 (65%), Gaps = 3/352 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN+ T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIYNTYTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMITEMHKDFDALNILRPELEPRATHHISEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD--SRKRNPA 195
++ +I AY+ E GDV F+V P+YG+LS Q LE ++G+RV D KRN
Sbjct: 122 INITETLIRRGHAYIAENGDVMFSVSTDPDYGKLSRQDLEQLQSGDRVRTDVVDVKRNSM 181
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK +K GEPSW SPWG GRPGWHIECSAM+ +L FDIHGGG DL+FPHHENEI
Sbjct: 182 DFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKHLGHHFDIHGGGSDLMFPHHENEI 241
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYR
Sbjct: 242 AQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYR 301
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
S LNYS L A A+ +Y +L+ + +++P AR A +D N
Sbjct: 302 SQLNYSEENLKQARSALERLYTSLRGTDKSVAPAGGEAFEARFIEAMDDDFN 353
>gi|435852952|ref|YP_007314271.1| cysteinyl-tRNA synthetase [Halobacteroides halobius DSM 5150]
gi|433669363|gb|AGB40178.1| cysteinyl-tRNA synthetase [Halobacteroides halobius DSM 5150]
Length = 476
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 177/385 (45%), Positives = 250/385 (64%), Gaps = 7/385 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++LKIYN++++QKE F P+ + KV MY CG T YD H+G+ARA + D++ RYLE+
Sbjct: 1 MSLKIYNTLSRQKEEFKPLEKNKVKMYSCGPTVYDYFHIGNARAFIVPDIIKRYLEYQGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V +V NFTD+DDK+I+RAN+ G L+N + + Y D A L PR ++H++
Sbjct: 61 QVKHVLNFTDIDDKMIKRANEEGITVSELANEFIEAYYKDTAALNIKEADVYPRATEHID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ ++I +I+ AY GDV+F V+K +YG+LS +++E+ +AG RV V++RK +P D
Sbjct: 121 EMIELIKDLIDKGYAYESNGDVYFRVDKFSDYGKLSNKKIEDLQAGARVEVNNRKESPID 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +K GEP+WDSPWG GRPGWHIECS MS YL +KFDIH GG+DL FPHHENE+A
Sbjct: 181 FVLWKKSKDGEPAWDSPWGAGRPGWHIECSVMSTKYLGAKFDIHTGGVDLTFPHHENEVA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A C + V YW+HNG++ + EKMSKSLGNFFT R+I E Y P +R FLIS HYRS
Sbjct: 241 QSEAHCGNQVVKYWLHNGYINIDGEKMSKSLGNFFTTREILEEYSPAVVRFFLISKHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVAL--SPFQEHGKTARINPAAEDCINKLRDEFH 374
P+N+S L+ A + + T+ + L P + + I + K F
Sbjct: 301 PINFSDQALEEAKAGLERLENTVDKLDHLLKQEPIEGELNGSHIKKVCKSKKEK----FI 356
Query: 375 ARMSDDLNTSHILTGAFQDALKFIN 399
M+DD NT+ + TGA + + +N
Sbjct: 357 TAMNDDFNTA-LATGALYELARELN 380
>gi|334143779|ref|YP_004536935.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium cyclicum ALM1]
gi|333964690|gb|AEG31456.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium cyclicum ALM1]
Length = 458
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 191/423 (45%), Positives = 252/423 (59%), Gaps = 34/423 (8%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L IYN+ T+QKE+F PIV GKVGMYVCGVT YD H+GHAR V FD + R++
Sbjct: 1 MALHIYNTETRQKEVFKPIVPGKVGMYVCGVTVYDYCHIGHARVMVVFDTVVRHMRARGL 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YVRN TD+DDKII+RA + E+ SL+ R+ D L L P +P+ +D +
Sbjct: 61 EVKYVRNITDIDDKIIKRALENQESVQSLTERFITAMHEDETALNILRPDIEPKATDFIP 120
Query: 137 QIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+I+ ++ +I AY GDV+F V+ +YGRLSG++ + AG RV V+ K++P
Sbjct: 121 EIQQLVNTLIEKGHAYAATNGDVYFKVKSFESYGRLSGKKQDELEAGARVEVNPNKQDPM 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWKA+KA EP+WDS WG GRPGWHIECSAMS + + DIHGGG+DL FPHHENEI
Sbjct: 181 DFVLWKASKANEPAWDSAWGQGRPGWHIECSAMSGSCIGERLDIHGGGMDLQFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A + V+ WMH G V +NEKMSKSL NFFTIR++ + YHP +R+FL+S+HYR
Sbjct: 241 AQSECAHGEHYVNTWMHVGFVRVDNEKMSKSLNNFFTIREVLKDYHPEVIRYFLLSSHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPLNY++ LD A + +Y L+ A I P + +F+
Sbjct: 301 SPLNYTIENLDIAKTNLARLYTALE--------------AATIQPGLVAVGTEFEAKFND 346
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT + F+ L K+ K QQ L+ L+ + N L
Sbjct: 347 AMDDDFNTPQAMAVLFE------------LVKEVNKTQQPELVGLLQSLANR-------L 387
Query: 436 GLL 438
GLL
Sbjct: 388 GLL 390
>gi|397663742|ref|YP_006505280.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
gi|395127153|emb|CCD05341.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
Length = 456
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 182/379 (48%), Positives = 245/379 (64%), Gaps = 19/379 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YNS+T++KE F + GK+GMYVCG+T YD HLGHAR+ V+FD++ RYL +V
Sbjct: 2 LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA++ G + L+ +Y D L LPP ++PR + H+E I
Sbjct: 62 TYVRNITDIDDKIIARASERGVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I +++ D AYV E GDV + V+ P YG+LS + +E +G RV + KR+P DF
Sbjct: 122 IRLIQRLLEKDSAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEPSW SPWG GRPGWHIECSAM+ H L +FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +YW+H G + N EKM+KS+GNF+TI + + +HP +R+FL+S+HYRSP
Sbjct: 242 SEAATGKPFANYWLHVGMLQINGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
LNYS L +A A+ +YQ ++D + A S E+ +++F+
Sbjct: 302 LNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEY----------------WQEQFNQ 345
Query: 376 RMSDDLNTSHILTGAFQDA 394
M+DD NT L+ FQ A
Sbjct: 346 AMNDDFNTPVALSVLFQLA 364
>gi|394989192|ref|ZP_10382026.1| hypothetical protein SCD_01611 [Sulfuricella denitrificans skB26]
gi|393791611|dbj|GAB71665.1| hypothetical protein SCD_01611 [Sulfuricella denitrificans skB26]
Length = 463
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/374 (50%), Positives = 236/374 (63%), Gaps = 8/374 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++ K+ F PI GKV MYVCG+T YD HLGHAR V FD++ R+L +V
Sbjct: 2 LKIYNTLSRSKQDFIPIESGKVRMYVCGMTVYDYCHLGHARVMVVFDMINRWLRADGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + E +L+ R+ D L P ++PR + ++ +
Sbjct: 62 TYVRNITDIDDKIIKRAAENHEPIDALTGRFIAAMDEDATKLGVEKPEHEPRATQYVPGM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +++N AYV GDV ++V K P YG+LSG+ L++ RAGERV V K +P DF
Sbjct: 122 IAMIQALMDNGLAYVARSGDVCYSVHKFPGYGKLSGKSLDDLRAGERVDVAVGKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK+AK GEP WDSPWG GRPGWHIECS MS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKSAKPGEPQWDSPWGQGRPGWHIECSVMSDALLGEHFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S +V+YW+HNG V +NEKMSKSLGNFFTIR++ ERY +R F++ AHYRSP
Sbjct: 242 SEGTHGHQHVNYWIHNGFVRVDNEKMSKSLGNFFTIREVLERYDAEVVRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A A+ +Y L++ SP HG A D + F A M
Sbjct: 302 LNYSDQHLDDAKGALTRLYTALKNVPPHPSPLTPHG-------VAIDWHDPYAAAFKAAM 354
Query: 378 SDDLNTSHILTGAF 391
DD NT+ + F
Sbjct: 355 EDDFNTAEAVAVLF 368
>gi|260779213|ref|ZP_05888105.1| cysteinyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
gi|260605377|gb|EEX31672.1| cysteinyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
Length = 460
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 196/423 (46%), Positives = 265/423 (62%), Gaps = 33/423 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V + YG+LS Q L+ +AG RV V+S KR+P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGQFDEYGKLSKQDLDQLQAGARVDVESAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWG GRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y +L+ ++ + PAA E+ + + F
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDLTV-------------PAAGGEEYVKR----FTE 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K +Q S + SL ++E+ ++
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN------RIKNDNLEQASAMGSL------MRELADVI 391
Query: 436 GLL 438
G+L
Sbjct: 392 GIL 394
>gi|86157699|ref|YP_464484.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
gi|109894880|sp|Q2IQG7.1|SYC_ANADE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|85774210|gb|ABC81047.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 481
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 193/435 (44%), Positives = 264/435 (60%), Gaps = 23/435 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+++++++++T QK P+ GK+ +YVCG T YD SHLGHAR V +D++ R+L
Sbjct: 1 MSIQVHDTLTAQKRELVPLEPGKLRLYVCGPTVYDYSHLGHARCYVVWDVVVRHLRARGL 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV +VRNFTDVDDKII+RAN+ GE+P++L++R+ + DM L L P +PRVS H+
Sbjct: 61 EVRFVRNFTDVDDKIIQRANERGEDPIALASRFADAFHEDMDALGNLRPDVEPRVSGHIP 120
Query: 137 QIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+I +I +++ AY GDV++AV K P YGRLS + L++ AG RV KR+P
Sbjct: 121 EIVALIARLVERGFAYAPGNGDVYYAVRKFPEYGRLSKRNLDDLIAGARVEPGEAKRDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DFALWKAAK GEP+WDSPWG GRPGWHIECSAM+ +L + D+H GG DL+FPHH NEI
Sbjct: 181 DFALWKAAKPGEPAWDSPWGKGRPGWHIECSAMTQKHLGAPIDLHAGGKDLVFPHHTNEI 240
Query: 256 AQSCAACQDS-----NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLI 310
AQS AA D YWMHNG V ++EKMSKSLGNFFTIR + R+ ALR FL+
Sbjct: 241 AQSVAATSDGLHAEDFARYWMHNGFVQIDDEKMSKSLGNFFTIRDVLARFDGEALRFFLL 300
Query: 311 SAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC-INKL 369
HYR N+S L A + +Y+T++ E A + P AE + +
Sbjct: 301 GTHYRRDFNFSDQVLAEAERRLSALYETVEKAERL---------GAGVEPGAEPAFVERA 351
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
R A + DD NT +L G +A N+ + KK P+++ + + + + V
Sbjct: 352 R----AALDDDFNTPQVL-GIVAEAFTEANALADRKGKKSPEEK--ARLAAFARGARAVG 404
Query: 430 EVLRILGLLPPGAYS 444
VL ILG P A S
Sbjct: 405 AVLGILGRPPAQALS 419
>gi|407793853|ref|ZP_11140884.1| cysteinyl-tRNA ligase [Idiomarina xiamenensis 10-D-4]
gi|407214007|gb|EKE83858.1| cysteinyl-tRNA ligase [Idiomarina xiamenensis 10-D-4]
Length = 465
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 197/424 (46%), Positives = 255/424 (60%), Gaps = 29/424 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L ++N++T+QKE F PI G+V +YVCGVT YD H+GHAR VSFD++ RYL + +V
Sbjct: 2 LTLFNTLTRQKEAFKPIHEGQVNLYVCGVTIYDFCHIGHARTYVSFDVVVRYLRAIGYQV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRAN+ G+ ++ + D A L L P +P V+DHM+ I
Sbjct: 62 KYVRNITDVDDKIIRRANESGQQIGDITRHFAAAMHEDFAALNLLEPDVEPTVTDHMDDI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I AYV + GDV F V +YG+LS Q L +AG RV VD+ K +P DF
Sbjct: 122 IAMIAALIEKGAAYVADNGDVLFDVSTFNDYGKLSKQDLSQLQAGARVDVDNSKADPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAM+ +L S FDIHGGG DLIFPHHENE+AQ
Sbjct: 182 VLWKPAKAGEPSWPSPWGAGRPGWHIECSAMNKKHLGSHFDIHGGGSDLIFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YWMH+G V ++ KMSKSLGNFFTIR + +Y +R+FL+S+HYRS
Sbjct: 242 SCCANDSAYVNYWMHSGMVQVDDVKMSKSLGNFFTIRDVLSQYSAETVRYFLLSSHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA---EDCINKLRDEFH 374
L+Y+ L A ++ +Y TL+D I PA E ++ F
Sbjct: 302 LSYTSDNLQQAHASLERLYGTLRD----------------IAPAEALDETLYDRYWQRFC 345
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M+DD N F+ A S M K+Q + L+ L + +K + +
Sbjct: 346 QAMNDDFNVPEATPLLFELA----RDSQRM--KQQGDAESLAQAAQLTAV---MKRLAAV 396
Query: 435 LGLL 438
LGLL
Sbjct: 397 LGLL 400
>gi|336316096|ref|ZP_08570998.1| cysteinyl-tRNA synthetase [Rheinheimera sp. A13L]
gi|335879586|gb|EGM77483.1| cysteinyl-tRNA synthetase [Rheinheimera sp. A13L]
Length = 459
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 186/376 (49%), Positives = 239/376 (63%), Gaps = 18/376 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++T++KE F P+V GKV MYVCG+T YD H+GHAR V+FD++ RYL +V
Sbjct: 2 LQIFNTLTRKKESFVPLVPGKVSMYVCGITIYDFCHVGHARTYVAFDVMNRYLRFSGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RAN+ GE+ +L+ RY D L +P +PRV+ HM +I
Sbjct: 62 TYVRNITDVDDKIIKRANENGESCDALTARYTVAMHDDFKALGLMPADIEPRVTTHMAEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++I ++ AY+ +GDV F V K YG+LS Q L+ ++G RV +D K +P DF
Sbjct: 122 IELIETLVAKGYAYIASDGDVLFDVSKYEAYGQLSQQNLDMLQSGARVEIDQAKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMSA +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMAKPNEPSWSSPWGEGRPGWHIECSAMSAKHLGKHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V + EKMSKSLGNFFT++ + Y+ A+R+FLIS+HYRS
Sbjct: 242 SCCAHDTPYVNTWIHTGMVQVDKEKMSKSLGNFFTVKDVLADYNAEAVRYFLISSHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEFHAR 376
LNYS L A A+ +Y L++ + PAA+ D N F A
Sbjct: 302 LNYSAENLLQAHSALGRLYTALRE----------------VKPAADVDMNNDYVKTFSAA 345
Query: 377 MSDDLNTSHILTGAFQ 392
M DD NT+ L F+
Sbjct: 346 MDDDFNTALALPVLFE 361
>gi|375134138|ref|YP_004994788.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
gi|325121583|gb|ADY81106.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
Length = 473
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 186/421 (44%), Positives = 258/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+ E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ-----KTTETLDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|242240078|ref|YP_002988259.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech703]
gi|242132135|gb|ACS86437.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech703]
Length = 461
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 227/350 (64%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L +V
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDMVSRYLRYLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE L++R E D A L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRAAENGETIAQLTDRMIAEMHADFASLNILSPDEEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV E GDV F+V+ +P YG LS Q LE +AG RV + KRNP DF
Sbjct: 122 IELVEKLIARRHAYVAENGDVMFSVDTAPGYGVLSRQDLEQLKAGARVEIAEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKLNEPSWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH G V + EKMSKSL NFFT+R + Y +R+FL+S HYRS
Sbjct: 242 STCAHGGEYVNYWMHTGMVMVDREKMSKSLNNFFTVRDVLAHYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + SP AR A +D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDESASPAGGEAFEARFCTAMDDDFN 351
>gi|41203|emb|CAA39691.1| cysteine-tRNA ligase [Escherichia coli K-12]
Length = 461
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ +++ +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A AV +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAAVERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|440229808|ref|YP_007343601.1| cysteinyl-tRNA synthetase [Serratia marcescens FGI94]
gi|440051513|gb|AGB81416.1| cysteinyl-tRNA synthetase [Serratia marcescens FGI94]
Length = 461
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 196/421 (46%), Positives = 247/421 (58%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCGVT YDL H+GH R V+FD++ RYL +L ++
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + GE L+ R E D L P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIRRAAENGETCDQLTGRMLAEMHADFDALLIERPDQEPRATQHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +++ D AYV GDV F+++ P YG LS Q LE +AG RV +D KRNP DF
Sbjct: 122 IEITQRLLERDHAYVASNGDVMFSIDSDPQYGLLSRQDLEQLQAGARVEIDDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDREKMSKSLNNFFTIRDVLGYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ + A P AR F M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDPAAQPAGGEAFEAR---------------FREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + E LRK+ N +LGL
Sbjct: 347 DDDFNTPEAYSALFD-----LAREVNRLKSEDMAAANAMAAE-LRKLAN-------VLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|159905981|ref|YP_001549643.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C6]
gi|229558715|sp|A9AAN8.1|SYC_METM6 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|159887474|gb|ABX02411.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C6]
Length = 476
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 179/392 (45%), Positives = 244/392 (62%), Gaps = 9/392 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YN++T+++E F P+ +V MYVCG T YD +HLGH R VSFD++ RYLEH+ V
Sbjct: 2 LKVYNTLTRKEEEFKPLNEKEVKMYVCGPTVYDHTHLGHGRTYVSFDIIRRYLEHIGYTV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
V NFTD+DDKII+RAN+ G+NP LS ++ +L DM L+ P P+V++H+ +I
Sbjct: 62 NLVINFTDIDDKIIKRANENGKNPKELSEQFITVFLNDMTTLKVKPADIYPKVTEHIPEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I ++I AY E V+F V+K NYG+LS LE+ +G R+ K+NP DFA
Sbjct: 122 IAFIEKLIEKGFAYETENGVYFEVKKFENYGKLSNINLEDLFSGVRIETSEEKKNPEDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP W SP+ GRPGWHIECSAMS+ YL +FDIHGGG DL FPHHENEIAQS
Sbjct: 182 LWKTAKPGEPKWKSPFVEGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V+YW+H G V N EKMSKSLGNF TI I++ Y P LR F I HYRSP+
Sbjct: 242 VAYSGKDWVNYWLHTGFVMVNGEKMSKSLGNFVTIEGISKEYDPEILRFFFIQRHYRSPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE----DCINKLRDEFH 374
+Y+ + + + IY +++ ++L E + +R+ E D + + F+
Sbjct: 302 DYTAESITHVKNNLEKIYNVIENIRISL----EKSEKSRVWGENEVLLYDILKNSKRNFY 357
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLK 406
M+ D NT L F+ + +N L+++K
Sbjct: 358 EAMNSDFNTVEALKSVFEVS-NGVNKYLSLVK 388
>gi|157146856|ref|YP_001454175.1| cysteinyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
gi|157084061|gb|ABV13739.1| hypothetical protein CKO_02631 [Citrobacter koseri ATCC BAA-895]
Length = 461
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 228/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYTL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDLEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG+LS Q LE +AG RV V K NP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLEQLQAGARVDVVDVKHNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKTVAPAGGEAFEARFVEAMNDDFN 351
>gi|410690076|ref|YP_006963796.1| Cysteinyl-tRNA synthetase [Salmonella sp. 14]
gi|389597196|gb|AFK89949.1| Cysteinyl-tRNA synthetase [Salmonella sp. 14]
Length = 463
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 180/352 (51%), Positives = 231/352 (65%), Gaps = 3/352 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN+ T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIYNTYTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMITEMHKDFDALNILRPELEPRATHHISEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD--SRKRNPA 195
++ +I AY+ E GDV F+V P YG+LS Q LE ++G+RV D KRN
Sbjct: 122 INITETLIRRGHAYIAENGDVMFSVSTDPGYGKLSRQDLEQLQSGDRVRTDVVDVKRNSM 181
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK +K GEPSW SPWG GRPGWHIECSAM+ +L FDIHGGG DL+FPHHENEI
Sbjct: 182 DFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKHLGHHFDIHGGGSDLMFPHHENEI 241
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYR
Sbjct: 242 AQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYR 301
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
S LNYS L A A+ +Y +L+ + +++P AR A +D N
Sbjct: 302 SQLNYSEENLKQARSALERLYTSLRGTDKSVAPAGGEAFEARFIEAMDDDFN 353
>gi|300715706|ref|YP_003740509.1| cysteinyl-tRNA synthetase [Erwinia billingiae Eb661]
gi|299061542|emb|CAX58656.1| Cysteinyl-tRNA synthetase [Erwinia billingiae Eb661]
Length = 462
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 177/351 (50%), Positives = 231/351 (65%), Gaps = 2/351 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE L+NR E D A L LPP +PR + H+ +I
Sbjct: 62 NYVRNITDIDDKIIKRANENGETVEVLTNRMIGEMHKDFAALNILPPDQEPRATRHISEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR-KRNPAD 196
++++++I+ + AYV GDV F+V P YG+LS Q LE +AG RV V+ KRNP D
Sbjct: 122 IEIVSKLIDREHAYVASNGDVMFSVPSDPQYGQLSRQDLEQLQAGARVEVEQDVKRNPMD 181
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +KA EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIA
Sbjct: 182 FVLWKMSKANEPSWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIA 241
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + V+YWMH+G V + EKMSKSL NFFT+R + + + +R FL+S HYRS
Sbjct: 242 QSTCAHEGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLQHFDAETVRCFLMSGHYRS 301
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNY L A A+ +Y +++ + + P R A +D N
Sbjct: 302 QLNYGEDNLKQARSALERLYTAIRNTDSSAEPAGGEVFETRFREAMDDDFN 352
>gi|359434426|ref|ZP_09224691.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20652]
gi|357918934|dbj|GAA60940.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20652]
Length = 459
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 187/395 (47%), Positives = 239/395 (60%), Gaps = 21/395 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ IYN++T+QKE F P+V GK+ MYVCG+T YD H+GHAR V FD++ RYL H+ ++
Sbjct: 2 VNIYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ L++R + D L L P +P V+ HM++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESINDLTSRMTKAMHEDFDSLNMLRPDIEPTVTSHMDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I AYV +GDV F V YG LS Q L ++G RV V K +P DF
Sbjct: 122 IVMVKRLIEKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSL NFFT+R++ + Y ++R+FLIS HYRS
Sbjct: 242 SCCANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKAYDAESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A ++ IY L+D E + N+ +F M
Sbjct: 302 LNYSQENLDQARSSLERIYTALRDVEPVECDLEG---------------NEFVAKFRKAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 412
DD NT L F+ + LN +K + Q
Sbjct: 347 DDDFNTPEALPVLFE-----LAKELNRVKDTEADQ 376
>gi|299770841|ref|YP_003732867.1| cysteinyl-tRNA synthetase [Acinetobacter oleivorans DR1]
gi|298700929|gb|ADI91494.1| cysteinyl-tRNA synthetase [Acinetobacter oleivorans DR1]
Length = 473
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 186/421 (44%), Positives = 258/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L C P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCAAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGSAYPAANGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QMYGQT-----TTETLDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRYLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|409405694|ref|ZP_11254156.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. GW103]
gi|386434243|gb|EIJ47068.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. GW103]
Length = 463
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/383 (49%), Positives = 244/383 (63%), Gaps = 28/383 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ + K+ F+PI GKV +YVCG+T YD H+GHAR V FD++ R+L V
Sbjct: 4 LKIYNTLARDKQTFSPIEPGKVRLYVCGMTVYDYCHIGHARVLVVFDMVQRWLRACGYAV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + GE L+NR+ D A L P ++PR + ++ ++
Sbjct: 64 TYVRNITDIDDKIIHRAAENGETIAQLTNRFIDAMNEDAAALGVQRPDHEPRATKYVPKM 123
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+I ++ N AY +GDV ++V P YG+LSG+ L++ RAGERV V++ KR+P DF
Sbjct: 124 LDLIGKLEKNGLAYKASDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDPLDF 183
Query: 198 ALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWKAAK EP WDSPWG GRPGWHIECSAMS+ L FDIHGGG DL FPHHENE
Sbjct: 184 VLWKAAKPSEPDEAKWDSPWGCGRPGWHIECSAMSSDLLGDHFDIHGGGQDLQFPHHENE 243
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A Q + V+YWMHNG V +NEKMSKSLGNFFTIR + ++Y P LR F++ AHY
Sbjct: 244 IAQSEGAHQHTFVNYWMHNGFVRIDNEKMSKSLGNFFTIRDVLKKYDPEVLRFFILRAHY 303
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
RSPLNYS LD A A+ +Y L+D + P A L DE H
Sbjct: 304 RSPLNYSDAHLDDARQALTRLYTALKD----------------VPPEAGGL---LADESH 344
Query: 375 AR-----MSDDLNTSHILTGAFQ 392
A+ ++DD NT ++ F+
Sbjct: 345 AQRFTEALNDDFNTPMAVSVLFE 367
>gi|423112988|ref|ZP_17100679.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5245]
gi|376389530|gb|EHT02220.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5245]
Length = 461
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG+LS Q L+ +AG RV V K NP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKHNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKFYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + +P AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKTAAPAGGEAFEARFIEAMDDDFN 351
>gi|374300824|ref|YP_005052463.1| cysteinyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
gi|332553760|gb|EGJ50804.1| cysteinyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
Length = 485
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 178/374 (47%), Positives = 241/374 (64%), Gaps = 3/374 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++ ++KE F P V GKV MYVCG+TAYDL H+GHAR+AV FD+L RYL EV
Sbjct: 1 MQLYNTLRRKKESFEPRVPGKVSMYVCGITAYDLCHIGHARSAVVFDILVRYLRSTGLEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T++RNFTDVDDKII RAN+ G + ++ +Y + + DM L L +P+ ++H+ ++
Sbjct: 61 TFIRNFTDVDDKIINRANERGVSSQEIAEKYIKTFHEDMDKLNVLRADIEPKCTEHIPEM 120
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I D AY + GDV+F V YG+LSG+ +++ RAG R+ K +P DF
Sbjct: 121 LTLTGELIAKDRAYKTLSGDVYFRVRAFEPYGKLSGRDIDDLRAGARITPGEAKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK EP W+SPWG GRPGWH+ECSAM+A Y+ DIHGGG DLIFPHHENEIAQ
Sbjct: 181 ALWKSAKPNEPFWESPWGKGRPGWHLECSAMAAKYVDLPLDIHGGGQDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AA +W+HNG V N EKMSKSLGNFFTIR I +++ P LR FL+ HYRSP
Sbjct: 241 TEAATDGELARFWVHNGFVQINQEKMSKSLGNFFTIRDILDKFMPEVLRFFLLGQHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L++S L+ A + IY + AL + GK A + D ++ + M
Sbjct: 301 LDFSFESLEEAEKGLRRIYAAMGQMREALQK-DKWGKAA-LPTEITDELSTAEKAWDEAM 358
Query: 378 SDDLNTSHILTGAF 391
+DDLNT+ L F
Sbjct: 359 TDDLNTAAALGHVF 372
>gi|415836402|ref|ZP_11518787.1| cysteinyl-tRNA synthetase [Escherichia coli RN587/1]
gi|417284620|ref|ZP_12071915.1| cysteine--tRNA ligase [Escherichia coli 3003]
gi|425276403|ref|ZP_18667746.1| cysteine--tRNA ligase [Escherichia coli ARS4.2123]
gi|323191193|gb|EFZ76457.1| cysteinyl-tRNA synthetase [Escherichia coli RN587/1]
gi|386242829|gb|EII84564.1| cysteine--tRNA ligase [Escherichia coli 3003]
gi|408207124|gb|EKI31885.1| cysteine--tRNA ligase [Escherichia coli ARS4.2123]
Length = 461
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKGGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|157369409|ref|YP_001477398.1| cysteinyl-tRNA synthetase [Serratia proteamaculans 568]
gi|187631631|sp|A8GAY0.1|SYC_SERP5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|157321173|gb|ABV40270.1| cysteinyl-tRNA synthetase [Serratia proteamaculans 568]
Length = 461
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 250/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCGVT YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + GE+ L+ R E D L P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIRRATENGESCDQLTTRMLAEMHADFDSLLIERPDIEPRATQHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I+ AYV GDV F+++ P YG LS Q L+ +AG RV +D KRNP DF
Sbjct: 122 VEITQRLIDRGHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDKEKMSKSLDNFFTIRDVLGYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ +V P AR F M
Sbjct: 302 LNYSEENLKQARTALERLYTALRGTDVNAQPAGGEVFEAR---------------FREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + + + + E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSALFD-----LAREVNRLKAED--------LTAANGLAAELRKLAKVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|417846323|ref|ZP_12492331.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21639]
gi|341952725|gb|EGT79246.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21639]
Length = 459
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 191/421 (45%), Positives = 255/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ +R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAETVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVVF-----------GGENFVATFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ + +N LK + E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFE-----MVREINKLKTEDA--------EKANGLAARLRELGAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|432945216|ref|ZP_20141490.1| cysteinyl-tRNA synthetase [Escherichia coli KTE196]
gi|433042019|ref|ZP_20229550.1| cysteinyl-tRNA synthetase [Escherichia coli KTE117]
gi|431462670|gb|ELH42878.1| cysteinyl-tRNA synthetase [Escherichia coli KTE196]
gi|431559940|gb|ELI33471.1| cysteinyl-tRNA synthetase [Escherichia coli KTE117]
Length = 461
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 230/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + +++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKSVAPAGGEAFEARFIEAMDDDFN 351
>gi|343513226|ref|ZP_08750335.1| cysteinyl-tRNA synthetase [Vibrio scophthalmi LMG 19158]
gi|342793531|gb|EGU29323.1| cysteinyl-tRNA synthetase [Vibrio scophthalmi LMG 19158]
Length = 460
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 192/418 (45%), Positives = 256/418 (61%), Gaps = 26/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GK+GMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCESLTERLIGEMHADFDALNMKRPDIEPRATEFIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV GDV F V K YG+LS Q L+ +AG RV ++S KR+P DF
Sbjct: 122 IALVEKLIERGFAYVASNGDVMFEVSKFDEYGKLSKQDLDQLQAGARVDIESAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWG GRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSAILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHNTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++++ R N A M
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDLSVEAAGGDEYQTRFNDA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+DD NT + F A +N LK + +Q +L + ++ EV+ IL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REINRLKAENIEQAS-----ALGVVMRQMAEVIGIL 394
>gi|262278507|ref|ZP_06056292.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
gi|262258858|gb|EEY77591.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
Length = 473
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 186/421 (44%), Positives = 258/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWSVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L C P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCAAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGSAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|416510386|ref|ZP_11736984.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416520758|ref|ZP_11740383.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416557371|ref|ZP_11759500.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|363549055|gb|EHL33412.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363554086|gb|EHL38325.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363578885|gb|EHL62687.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
Length = 461
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GEN ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGENFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + +P AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFN 351
>gi|309797198|ref|ZP_07691594.1| cysteinyl-tRNA synthetase [Escherichia coli MS 145-7]
gi|308119182|gb|EFO56444.1| cysteinyl-tRNA synthetase [Escherichia coli MS 145-7]
Length = 461
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|423107105|ref|ZP_17094800.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5243]
gi|376389231|gb|EHT01923.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5243]
Length = 461
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG+LS Q L+ +AG RV V K NP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKHNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKFYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + +P AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKTAAPAGGEAFEARFIEAMDDDFN 351
>gi|359428272|ref|ZP_09219308.1| cysteinyl-tRNA synthetase [Acinetobacter sp. NBRC 100985]
gi|358236288|dbj|GAB00847.1| cysteinyl-tRNA synthetase [Acinetobacter sp. NBRC 100985]
Length = 473
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 183/421 (43%), Positives = 263/421 (62%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G++ +YVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII RAN+ GE L+ R+ D A+L C+ P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIARANENGETIQQLTARFIDAMNEDAANLGCVAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI+ +++ AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MISTLVDKGAAYPATNGDVYFEVTKFDKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A A+ Y + + + Q +G+ E + F+ M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFKAYQ------QVYGQ-----KTVETLEQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ +Q +L +LR++ N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQAEQATALYSTLRQLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|261345727|ref|ZP_05973371.1| cysteine--tRNA ligase [Providencia rustigianii DSM 4541]
gi|282566216|gb|EFB71751.1| cysteine--tRNA ligase [Providencia rustigianii DSM 4541]
Length = 462
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/421 (45%), Positives = 255/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++T+QKE F PI GK+GMYVCG+T YDL H+GH R V+FD + RYL +L ++
Sbjct: 2 LQIFNTLTRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E+ L+ R E D L L P +PR + H+ +I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVEELTTRMLAEMHKDFDALNILRPDSEPRATRHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V+ PNYG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTESLIERGHAYVADNGDVMFEVKTDPNYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L S FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMH+G V + EKMSKSL NFFTIR + + Y +R+FL+S HYRS
Sbjct: 242 STCAHEGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLQYYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ +Y +L+ + +++P AR A M
Sbjct: 302 LNYTEENLKQARTALERLYTSLRGTDKSVAPAGGEAFKARFCEA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F I +N LK + + + + +++E+ ++LGL
Sbjct: 347 NDDFNTPEAYSVLFD-----IAREINRLKTED--------MAAANGMAAQLRELAKVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|448240905|ref|YP_007404958.1| cysteinyl-tRNA synthetase [Serratia marcescens WW4]
gi|445211269|gb|AGE16939.1| cysteinyl-tRNA synthetase [Serratia marcescens WW4]
Length = 461
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 249/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCGVT YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIRRAAENHETCDQLTERMLAEMHADFDALLIDRPDQEPRATQHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I+ D AYV GDV F+++ P YG LS Q L+ +AG RV +D KRNP DF
Sbjct: 122 IEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWQSPWGPGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDKEKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + +P AR F M
Sbjct: 302 LNYSEENLKQARTALERLYTALRGTDADAAPAGGEAFEAR---------------FREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + + + + E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSALFD-----LAREVNRLKSED--------MAAANGMAAELRKLAKVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|257092145|ref|YP_003165786.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257044669|gb|ACV33857.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 457
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/366 (51%), Positives = 235/366 (64%), Gaps = 15/366 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+ K+ F PI G V MYVCG+T YD HLGHAR V FDL+ R+L V
Sbjct: 2 LKIYNSLTRAKQDFVPITPGSVRMYVCGMTVYDHCHLGHARVLVVFDLVQRWLRASGLRV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + E+ L+NR+ D A L P ++PR ++++ Q+
Sbjct: 62 TYVRNITDIDDKIIKRALENKESIGDLTNRFIAFMNDDAAALGVEKPDHEPRATEYVPQM 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++I ++ N AY V +GDV F+V K P YG+LSG+ L++ RAGERV VD K +P DF
Sbjct: 122 LELIGRLEKNGLAYQVPDGDVNFSVRKFPGYGKLSGKALDDLRAGERVDVDGTKEDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK A+ GEPSW SPWG GRPGWHIECSAMS+ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKHAREGEPSWPSPWGDGRPGWHIECSAMSSVLLGEHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A Q V+YWMHNG V ++EKMSKSLGNF TI++I +Y P LR F++ AHYRSP
Sbjct: 242 SEGAHQCRFVNYWMHNGFVRVDDEKMSKSLGNFCTIKEILRKYDPEVLRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A A+ +Y L +TA +P + D F M
Sbjct: 302 LNYSDTHLDDARQALSRLYTAL--------------RTANTDPPSIDWDEPHALRFRDAM 347
Query: 378 SDDLNT 383
DD NT
Sbjct: 348 DDDFNT 353
>gi|445443240|ref|ZP_21442575.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-92]
gi|444762811|gb|ELW87163.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-92]
Length = 473
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 185/421 (43%), Positives = 259/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++ AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVTKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + +++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMDKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|375259436|ref|YP_005018606.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca KCTC 1686]
gi|365908914|gb|AEX04367.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca KCTC 1686]
Length = 461
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 228/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG+LS Q L+ +AG RV V K NP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKHNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKFYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + P AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKTAEPAGGEAFEARFIEAMDDDFN 351
>gi|163785456|ref|ZP_02180059.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
gi|159879275|gb|EDP73176.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
Length = 436
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 181/404 (44%), Positives = 252/404 (62%), Gaps = 17/404 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++LK+YN+++ QKE F PI G+V +Y CGVT YD++H+GH R+ + FD++ RYL +L
Sbjct: 1 MSLKVYNTLSGQKEEFVPINPGEVKIYTCGVTVYDVNHVGHGRSLIVFDMIRRYLRYLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V +VRNFTDVDDKII RA + +++RY +EY D + + P +PRV+ H+
Sbjct: 61 NVKFVRNFTDVDDKIINRAKNECLPFTVIADRYIKEYFQDAENFRIEPADVEPRVTTHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I D I ++I+ AY VEGDV+F+V K +YG+LS + ++ AG RV +K++P D
Sbjct: 121 DIIDFIQKLIDKGYAYEVEGDVYFSVRKFKDYGKLSKRSVDELIAGARVEPGEKKKDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA+KAGEP+WDSPWG GRPGWH EC AM +L DIHGGG+DL FPHHENE+A
Sbjct: 181 FALWKASKAGEPAWDSPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTFPHHENELA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ A + YW+HNG VT N +KMSKSLGN+ T+++I +Y P LR ++S HYRS
Sbjct: 241 QAEALSEKPFARYWIHNGLVTVNGQKMSKSLGNYITLKEIYSKYEPDILRLLVLSVHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE----DCINKLRDE 372
PL++S +++ A + + + E+ L E NP E D I K
Sbjct: 301 PLDFSWEKMEETKKAYERLKNAMDEYEI-LEKLPE-------NPDFEGHLYDAIAKAEQG 352
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 416
F+A MSDD NT L F + +N+LK K K+ +S
Sbjct: 353 FYAAMSDDFNTPEALAALFS-----LVREMNILKDKAVKEGGIS 391
>gi|421624016|ref|ZP_16064894.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC098]
gi|408702528|gb|EKL47938.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC098]
Length = 473
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 186/421 (44%), Positives = 259/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ E L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENDETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|296313701|ref|ZP_06863642.1| cysteine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
gi|296839719|gb|EFH23657.1| cysteine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
Length = 475
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/395 (48%), Positives = 243/395 (61%), Gaps = 31/395 (7%)
Query: 15 MDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHL 74
M++T IYN++T+QKE FTPI V MYVCG+T YD HLGHAR V FD++ R+L
Sbjct: 1 MNMT-TIYNTLTRQKEPFTPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREC 59
Query: 75 KCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDH 134
+TYVRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ +++
Sbjct: 60 GYPLTYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDANALGVLRPDIEPKATEN 119
Query: 135 MEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRN 193
+ Q+ MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+
Sbjct: 120 IPQMIAMIETLIQNSKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRD 179
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + L FDIHGGG DL FPHHEN
Sbjct: 180 PLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLLGDTFDIHGGGADLQFPHHEN 239
Query: 254 EIAQSCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 297
EIAQS A S+V YW+HNG + + EKMSKSLGNFFTIR++
Sbjct: 240 EIAQSVGASGHSCGHNHAQTHYGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVL 299
Query: 298 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 357
++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 300 KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---- 355
Query: 358 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 356 ---------NGYTRRFYAAMNDDFGTVEAVAVLFE 381
>gi|291287685|ref|YP_003504501.1| cysteinyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
gi|290884845|gb|ADD68545.1| cysteinyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
Length = 479
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 184/421 (43%), Positives = 255/421 (60%), Gaps = 8/421 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N+++ +KE F P+ + V +YVCGVT YDL H+GHAR++ FD++ RYL V
Sbjct: 2 LKVFNTLSNKKEEFQPLQKDNVKIYVCGVTVYDLCHIGHARSSGVFDVIRRYLMFKGYNV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTD+DDKII+R+N+ + L+ + E+ DM L L P + P+ +D+++Q+
Sbjct: 62 TFVKNFTDIDDKIIKRSNEKQMDWRELAANFIAEHDADMDSLNILRPDHTPKATDYIKQM 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
M +I AY GD+++ V+K YG+LS ++LE+ AG R+ V +K NP DF
Sbjct: 122 IQMCETLIEKGFAYESNGDIYYRVQKFEEYGKLSHRKLEDMMAGARIEVSVKKENPYDFV 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA+K GEPSW+SPWG GRPGWHIECS MS L FDIHGGG DL+FPHHENEIAQS
Sbjct: 182 LWKASKPGEPSWESPWGQGRPGWHIECSVMSEDLLGLPFDIHGGGKDLVFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AAC YW+HNG V N EKMSKSLGNFFTIR + + + +R+FL++ HYRS L
Sbjct: 242 EAACGCMFSKYWIHNGFVNVNQEKMSKSLGNFFTIRDVLKEFDAEIVRYFLMTTHYRSAL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++S L A ++ IY L + +S F K I AE D+F M
Sbjct: 302 DFSQDHLLEAEKSLNRIYTMLDE----ISRFNAGKKGVDITKEAEKMKETFMDKFQTAMD 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT L F+ I + +L K K +L E+++ + + +VL I+
Sbjct: 358 DDFNTPEALAAMFE----VIRETNRLLGSKPNKISFPALQEAVQDVFKVILDVLGIVKYT 413
Query: 439 P 439
P
Sbjct: 414 P 414
>gi|422765059|ref|ZP_16818786.1| cysteinyl-tRNA synthetase [Escherichia coli E1520]
gi|323938475|gb|EGB34726.1| cysteinyl-tRNA synthetase [Escherichia coli E1520]
Length = 461
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGKYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|432328526|ref|YP_007246670.1| cysteinyl-tRNA synthetase [Aciduliprofundum sp. MAR08-339]
gi|432135235|gb|AGB04504.1| cysteinyl-tRNA synthetase [Aciduliprofundum sp. MAR08-339]
Length = 458
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 187/417 (44%), Positives = 259/417 (62%), Gaps = 10/417 (2%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IY++++ ++ F P G+VG+YVCG T YD +H+GHAR A+ FD+L R+LE++ +V
Sbjct: 6 IYDTLSGERRKFEPFHPGRVGIYVCGPTTYDYAHIGHARPAIMFDVLRRFLEYMGYDVIL 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+ N TDVDDKII +AN+LG++P+ +++ Y QEYL DM L+ P P+ + HME+I +
Sbjct: 66 ISNITDVDDKIINKANELGKDPIEMAHYYAQEYLKDMDSLRVRRPNIIPKATRHMEEIIN 125
Query: 141 MITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALW 200
++ +I AY GDV+F+VEK NYG+LS +++E+ AG RV V +KRNP DFALW
Sbjct: 126 LVKTLIEKGYAYESGGDVYFSVEKFKNYGKLSHRKMEDMLAGARVEVSDKKRNPLDFALW 185
Query: 201 KAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCA 260
KAAK GEP W SPWGPGRPGWHIECSAMS YL S DIHGGG DLIFPHHENEIAQS A
Sbjct: 186 KAAKPGEPHWPSPWGPGRPGWHIECSAMSMTYLGSTLDIHGGGADLIFPHHENEIAQSEA 245
Query: 261 ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNY 320
A YWMH G V EKMSKS+GN F IR ++Y P LR +++HYR P ++
Sbjct: 246 ATGKPFARYWMHVGLVRFEKEKMSKSIGNVFLIRDFLKKYPPEVLRLMYLNSHYRKPYDF 305
Query: 321 SVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA-RINPAAEDCINKLRDEFHARMS- 378
S + + I+ T Q + + S +T RI A I+ L D+F+ R +
Sbjct: 306 SEKNITDTIPLLEKIWSTYQILKKSASGGDASEQTKMRIRNAKRSIISALSDDFNTREAL 365
Query: 379 ----DDLNTSHILTGA-FQDALKFINSS---LNMLKKKQPKQQQLSLIESLRKIENE 427
+ +N + L G + AL+F+ ++L + ++ LI L ++ NE
Sbjct: 366 AEYLNFVNYAKDLHGPDARAALEFLGEMDYIFDLLPRGTGGDKEEKLIGLLLEVRNE 422
>gi|125974555|ref|YP_001038465.1| cysteinyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
gi|256004086|ref|ZP_05429071.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
gi|281419079|ref|ZP_06250096.1| cysteinyl-tRNA synthetase [Clostridium thermocellum JW20]
gi|385779993|ref|YP_005689158.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
gi|419721338|ref|ZP_14248502.1| cysteinyl-tRNA synthetase [Clostridium thermocellum AD2]
gi|419726884|ref|ZP_14253904.1| cysteinyl-tRNA synthetase [Clostridium thermocellum YS]
gi|187629806|sp|A3DH43.1|SYC_CLOTH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|125714780|gb|ABN53272.1| cysteinyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
gi|255992009|gb|EEU02106.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
gi|281407228|gb|EFB37489.1| cysteinyl-tRNA synthetase [Clostridium thermocellum JW20]
gi|316941673|gb|ADU75707.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
gi|380769849|gb|EIC03749.1| cysteinyl-tRNA synthetase [Clostridium thermocellum YS]
gi|380782508|gb|EIC12142.1| cysteinyl-tRNA synthetase [Clostridium thermocellum AD2]
Length = 468
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 180/408 (44%), Positives = 257/408 (62%), Gaps = 10/408 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++T++KE F PI +V MY CG T Y+ H+G+AR + FD L RYLE+ V
Sbjct: 1 MRLYNTLTRKKEEFHPIDEKEVKMYSCGPTVYNYFHIGNARPFIIFDTLRRYLEYKGYNV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I+RAN+ G L++++ EY VD L T PR +++++ I
Sbjct: 61 KFVQNFTDIDDKMIKRANEEGITVKELADKFINEYFVDAKGLGIKEATVHPRATENIDAI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+MI ++ AY V+GDV+F+ K YG+LS Q LE+ G R+ VD RK++P DFA
Sbjct: 121 IEMIKKLEEKGFAYNVDGDVYFSARKFTEYGKLSHQSLEDLELGARIDVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+WDSPWG GRPGWHIECSAM+ YL DIH GG DL+FPHHENEIAQS
Sbjct: 181 LWKAQKPGEPAWDSPWGKGRPGWHIECSAMANKYLGETIDIHSGGQDLVFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +W+HNG + + EKM+KS GNFFT+R I + + +R F++SAHYRSP+
Sbjct: 241 EAANGKPFARFWLHNGFINVDGEKMAKSKGNFFTVRDIAKTFDYEVIRFFMLSAHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHA 375
N+S L+ A + + IY L + E +EH + +I + + N+L + +F
Sbjct: 301 NFSAELLEQAKNGLERIYNCLDNLEY----LKEHAQAEKITDSERELQNRLLGIKAKFIE 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKK--KQPKQQQLSLIESL 421
M DD+NT+ + F D +K +N+++N K+ LSLI+ L
Sbjct: 357 AMDDDINTADAIAAIF-DIVKEVNTNINATSNSSKEIIDFSLSLIKEL 403
>gi|424815404|ref|ZP_18240555.1| cysteinyl-tRNA synthetase [Escherichia fergusonii ECD227]
gi|325496424|gb|EGC94283.1| cysteinyl-tRNA synthetase [Escherichia fergusonii ECD227]
Length = 461
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|387819784|ref|YP_005680131.1| cysteinyl-tRNA synthetase [Clostridium botulinum H04402 065]
gi|322807828|emb|CBZ05403.1| cysteinyl-tRNA synthetase [Clostridium botulinum H04402 065]
Length = 465
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 175/404 (43%), Positives = 257/404 (63%), Gaps = 4/404 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T +KE F +V G+V MYVCG T Y+ H+G+AR V FD + RYLE+ +V
Sbjct: 1 MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I+RAN+ G L +R+ +EY D DL T PR ++ ME+I
Sbjct: 61 KFIQNFTDIDDKMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ +I AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA
Sbjct: 121 IKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K GEP+W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS
Sbjct: 181 IWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+H+ V NN+KMSKSL NFFT RQI E+Y LR F++S HYR+ +
Sbjct: 241 EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTARQILEKYDADVLRMFMLSGHYRTQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARM 377
N+S+ LDS A+ +Y ++ + E L + E + + E + K ++++ +M
Sbjct: 301 NFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
DD NT+ ++ F D ++ +N+++ + K+ + L LI L
Sbjct: 359 DDDFNTADAISVIF-DLIRDVNTNVTIESSKEIVKYTLDLIREL 401
>gi|418849052|ref|ZP_13403787.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392822399|gb|EJA78211.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
Length = 461
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 230/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 ALWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + +P AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFN 351
>gi|397656419|ref|YP_006497121.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca E718]
gi|423101703|ref|ZP_17089405.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5242]
gi|376390529|gb|EHT03212.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5242]
gi|394345010|gb|AFN31131.1| Cysteinyl-tRNA synthetase [Klebsiella oxytoca E718]
Length = 461
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 228/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG+LS Q L+ +AG RV V K NP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKHNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKFYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + P AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKTAEPAGGEAFEARFIEAMDDDFN 351
>gi|218547963|ref|YP_002381754.1| cysteinyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
gi|422806499|ref|ZP_16854931.1| cysteinyl-tRNA synthetase [Escherichia fergusonii B253]
gi|432390459|ref|ZP_19633323.1| cysteinyl-tRNA synthetase [Escherichia coli KTE21]
gi|226735060|sp|B7LJI4.1|SYC_ESCF3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|218355504|emb|CAQ88115.1| cysteinyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
gi|324113037|gb|EGC07013.1| cysteinyl-tRNA synthetase [Escherichia fergusonii B253]
gi|430922816|gb|ELC43563.1| cysteinyl-tRNA synthetase [Escherichia coli KTE21]
Length = 461
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|15800263|ref|NP_286275.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
gi|15829842|ref|NP_308615.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
gi|168747790|ref|ZP_02772812.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
gi|168754640|ref|ZP_02779647.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
gi|168768489|ref|ZP_02793496.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
gi|168774602|ref|ZP_02799609.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
gi|168779029|ref|ZP_02804036.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
gi|168786387|ref|ZP_02811394.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC869]
gi|195936093|ref|ZP_03081475.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
gi|208808572|ref|ZP_03250909.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
gi|208815777|ref|ZP_03256956.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
gi|208822926|ref|ZP_03263244.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
gi|209397071|ref|YP_002269179.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
gi|217324178|ref|ZP_03440262.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
gi|254791714|ref|YP_003076551.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
gi|261224014|ref|ZP_05938295.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
gi|261257708|ref|ZP_05950241.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
gi|291281437|ref|YP_003498255.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
gi|387505547|ref|YP_006157803.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. RM12579]
gi|387881125|ref|YP_006311427.1| cysteinyl-tRNA synthetase [Escherichia coli Xuzhou21]
gi|416313090|ref|ZP_11658025.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
gi|416316906|ref|ZP_11660038.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
gi|416325524|ref|ZP_11665932.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
gi|416780688|ref|ZP_11876986.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
gi|416791781|ref|ZP_11881885.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
gi|416803464|ref|ZP_11886776.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
gi|416814018|ref|ZP_11891462.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97]
gi|416824091|ref|ZP_11895980.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
gi|416835122|ref|ZP_11901349.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
gi|419043251|ref|ZP_13590227.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3A]
gi|419049144|ref|ZP_13596061.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3B]
gi|419055199|ref|ZP_13602055.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3C]
gi|419060792|ref|ZP_13607576.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3D]
gi|419066698|ref|ZP_13613352.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3E]
gi|419073826|ref|ZP_13619398.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3F]
gi|419078890|ref|ZP_13624373.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4A]
gi|419084511|ref|ZP_13629925.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4B]
gi|419090569|ref|ZP_13635888.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4C]
gi|419096679|ref|ZP_13641923.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4D]
gi|419102276|ref|ZP_13647442.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4E]
gi|419107627|ref|ZP_13652737.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4F]
gi|419113393|ref|ZP_13658428.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5A]
gi|419118975|ref|ZP_13663959.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5B]
gi|419127178|ref|ZP_13672057.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5C]
gi|419130196|ref|ZP_13675049.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5D]
gi|419134957|ref|ZP_13679765.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5E]
gi|420267922|ref|ZP_14770329.1| cysteine--tRNA ligase [Escherichia coli PA22]
gi|420273603|ref|ZP_14775936.1| cysteine--tRNA ligase [Escherichia coli PA40]
gi|420278692|ref|ZP_14780959.1| cysteine--tRNA ligase [Escherichia coli TW06591]
gi|420286388|ref|ZP_14788591.1| cysteine--tRNA ligase [Escherichia coli TW10246]
gi|420290673|ref|ZP_14792838.1| cysteine--tRNA ligase [Escherichia coli TW11039]
gi|420296512|ref|ZP_14798607.1| cysteine--tRNA ligase [Escherichia coli TW09109]
gi|420302486|ref|ZP_14804516.1| cysteine--tRNA ligase [Escherichia coli TW10119]
gi|420308017|ref|ZP_14809990.1| cysteine--tRNA ligase [Escherichia coli EC1738]
gi|420313272|ref|ZP_14815180.1| cysteine--tRNA ligase [Escherichia coli EC1734]
gi|421810767|ref|ZP_16246576.1| cysteine--tRNA ligase [Escherichia coli 8.0416]
gi|421816855|ref|ZP_16252417.1| cysteine--tRNA ligase [Escherichia coli 10.0821]
gi|421822243|ref|ZP_16257680.1| cysteine--tRNA ligase [Escherichia coli FRIK920]
gi|421828974|ref|ZP_16264303.1| cysteine--tRNA ligase [Escherichia coli PA7]
gi|423658502|ref|ZP_17633799.1| cysteine--tRNA ligase [Escherichia coli PA31]
gi|424075405|ref|ZP_17812766.1| cysteine--tRNA ligase [Escherichia coli FDA505]
gi|424081733|ref|ZP_17818606.1| cysteine--tRNA ligase [Escherichia coli FDA517]
gi|424088357|ref|ZP_17824627.1| cysteine--tRNA ligase [Escherichia coli FRIK1996]
gi|424094572|ref|ZP_17830344.1| cysteine--tRNA ligase [Escherichia coli FRIK1985]
gi|424100974|ref|ZP_17836150.1| cysteine--tRNA ligase [Escherichia coli FRIK1990]
gi|424107789|ref|ZP_17842381.1| cysteine--tRNA ligase [Escherichia coli 93-001]
gi|424113778|ref|ZP_17847942.1| cysteine--tRNA ligase [Escherichia coli PA3]
gi|424119840|ref|ZP_17853566.1| cysteine--tRNA ligase [Escherichia coli PA5]
gi|424126095|ref|ZP_17859310.1| cysteine--tRNA ligase [Escherichia coli PA9]
gi|424138726|ref|ZP_17871035.1| cysteine--tRNA ligase [Escherichia coli PA14]
gi|424145170|ref|ZP_17876954.1| cysteine--tRNA ligase [Escherichia coli PA15]
gi|424151314|ref|ZP_17882582.1| cysteine--tRNA ligase [Escherichia coli PA24]
gi|424185053|ref|ZP_17888017.1| cysteine--tRNA ligase [Escherichia coli PA25]
gi|424267094|ref|ZP_17893917.1| cysteine--tRNA ligase [Escherichia coli PA28]
gi|424422510|ref|ZP_17899647.1| cysteine--tRNA ligase [Escherichia coli PA32]
gi|424453720|ref|ZP_17905272.1| cysteine--tRNA ligase [Escherichia coli PA33]
gi|424460023|ref|ZP_17910974.1| cysteine--tRNA ligase [Escherichia coli PA39]
gi|424466492|ref|ZP_17916695.1| cysteine--tRNA ligase [Escherichia coli PA41]
gi|424473053|ref|ZP_17922742.1| cysteine--tRNA ligase [Escherichia coli PA42]
gi|424479001|ref|ZP_17928261.1| cysteine--tRNA ligase [Escherichia coli TW07945]
gi|424485067|ref|ZP_17933948.1| cysteine--tRNA ligase [Escherichia coli TW09098]
gi|424491202|ref|ZP_17939604.1| cysteine--tRNA ligase [Escherichia coli TW09195]
gi|424498277|ref|ZP_17945566.1| cysteine--tRNA ligase [Escherichia coli EC4203]
gi|424504513|ref|ZP_17951304.1| cysteine--tRNA ligase [Escherichia coli EC4196]
gi|424510767|ref|ZP_17957015.1| cysteine--tRNA ligase [Escherichia coli TW14313]
gi|424518332|ref|ZP_17962776.1| cysteine--tRNA ligase [Escherichia coli TW14301]
gi|424524165|ref|ZP_17968202.1| cysteine--tRNA ligase [Escherichia coli EC4421]
gi|424530371|ref|ZP_17974013.1| cysteine--tRNA ligase [Escherichia coli EC4422]
gi|424536346|ref|ZP_17979623.1| cysteine--tRNA ligase [Escherichia coli EC4013]
gi|424542256|ref|ZP_17985089.1| cysteine--tRNA ligase [Escherichia coli EC4402]
gi|424548576|ref|ZP_17990797.1| cysteine--tRNA ligase [Escherichia coli EC4439]
gi|424554844|ref|ZP_17996577.1| cysteine--tRNA ligase [Escherichia coli EC4436]
gi|424561189|ref|ZP_18002488.1| cysteine--tRNA ligase [Escherichia coli EC4437]
gi|424567218|ref|ZP_18008147.1| cysteine--tRNA ligase [Escherichia coli EC4448]
gi|424573404|ref|ZP_18013842.1| cysteine--tRNA ligase [Escherichia coli EC1845]
gi|424579358|ref|ZP_18019305.1| cysteine--tRNA ligase [Escherichia coli EC1863]
gi|425096036|ref|ZP_18499072.1| cysteine--tRNA ligase [Escherichia coli 3.4870]
gi|425102172|ref|ZP_18504834.1| cysteine--tRNA ligase [Escherichia coli 5.2239]
gi|425107971|ref|ZP_18510235.1| cysteine--tRNA ligase [Escherichia coli 6.0172]
gi|425123800|ref|ZP_18525390.1| cysteine--tRNA ligase [Escherichia coli 8.0586]
gi|425129836|ref|ZP_18530948.1| cysteine--tRNA ligase [Escherichia coli 8.2524]
gi|425136173|ref|ZP_18536909.1| cysteine--tRNA ligase [Escherichia coli 10.0833]
gi|425142078|ref|ZP_18542378.1| cysteine--tRNA ligase [Escherichia coli 10.0869]
gi|425148392|ref|ZP_18548299.1| cysteine--tRNA ligase [Escherichia coli 88.0221]
gi|425154011|ref|ZP_18553571.1| cysteine--tRNA ligase [Escherichia coli PA34]
gi|425160458|ref|ZP_18559645.1| cysteine--tRNA ligase [Escherichia coli FDA506]
gi|425165967|ref|ZP_18564789.1| cysteine--tRNA ligase [Escherichia coli FDA507]
gi|425172262|ref|ZP_18570672.1| cysteine--tRNA ligase [Escherichia coli FDA504]
gi|425184291|ref|ZP_18581927.1| cysteine--tRNA ligase [Escherichia coli FRIK1997]
gi|425191041|ref|ZP_18588181.1| cysteine--tRNA ligase [Escherichia coli NE1487]
gi|425197374|ref|ZP_18594036.1| cysteine--tRNA ligase [Escherichia coli NE037]
gi|425204032|ref|ZP_18600173.1| cysteine--tRNA ligase [Escherichia coli FRIK2001]
gi|425209788|ref|ZP_18605535.1| cysteine--tRNA ligase [Escherichia coli PA4]
gi|425215828|ref|ZP_18611158.1| cysteine--tRNA ligase [Escherichia coli PA23]
gi|425222402|ref|ZP_18617272.1| cysteine--tRNA ligase [Escherichia coli PA49]
gi|425228643|ref|ZP_18623050.1| cysteine--tRNA ligase [Escherichia coli PA45]
gi|425234944|ref|ZP_18628916.1| cysteine--tRNA ligase [Escherichia coli TT12B]
gi|425240946|ref|ZP_18634592.1| cysteine--tRNA ligase [Escherichia coli MA6]
gi|425247066|ref|ZP_18640288.1| cysteine--tRNA ligase [Escherichia coli 5905]
gi|425252799|ref|ZP_18645688.1| cysteine--tRNA ligase [Escherichia coli CB7326]
gi|425259111|ref|ZP_18651486.1| cysteine--tRNA ligase [Escherichia coli EC96038]
gi|425265214|ref|ZP_18657146.1| cysteine--tRNA ligase [Escherichia coli 5412]
gi|425292673|ref|ZP_18683266.1| cysteine--tRNA ligase [Escherichia coli PA38]
gi|425309409|ref|ZP_18698886.1| cysteine--tRNA ligase [Escherichia coli EC1735]
gi|425315327|ref|ZP_18704413.1| cysteine--tRNA ligase [Escherichia coli EC1736]
gi|425321382|ref|ZP_18710063.1| cysteine--tRNA ligase [Escherichia coli EC1737]
gi|425327573|ref|ZP_18715806.1| cysteine--tRNA ligase [Escherichia coli EC1846]
gi|425333759|ref|ZP_18721490.1| cysteine--tRNA ligase [Escherichia coli EC1847]
gi|425340177|ref|ZP_18727429.1| cysteine--tRNA ligase [Escherichia coli EC1848]
gi|425346052|ref|ZP_18732864.1| cysteine--tRNA ligase [Escherichia coli EC1849]
gi|425352271|ref|ZP_18738660.1| cysteine--tRNA ligase [Escherichia coli EC1850]
gi|425358264|ref|ZP_18744246.1| cysteine--tRNA ligase [Escherichia coli EC1856]
gi|425364367|ref|ZP_18749927.1| cysteine--tRNA ligase [Escherichia coli EC1862]
gi|425370818|ref|ZP_18755789.1| cysteine--tRNA ligase [Escherichia coli EC1864]
gi|425383609|ref|ZP_18767497.1| cysteine--tRNA ligase [Escherichia coli EC1866]
gi|425390305|ref|ZP_18773773.1| cysteine--tRNA ligase [Escherichia coli EC1868]
gi|425396427|ref|ZP_18779482.1| cysteine--tRNA ligase [Escherichia coli EC1869]
gi|425402413|ref|ZP_18785025.1| cysteine--tRNA ligase [Escherichia coli EC1870]
gi|425408952|ref|ZP_18791116.1| cysteine--tRNA ligase [Escherichia coli NE098]
gi|425415230|ref|ZP_18796876.1| cysteine--tRNA ligase [Escherichia coli FRIK523]
gi|425426375|ref|ZP_18807433.1| cysteine--tRNA ligase [Escherichia coli 0.1304]
gi|428945035|ref|ZP_19017687.1| cysteine--tRNA ligase [Escherichia coli 88.1467]
gi|428951187|ref|ZP_19023326.1| cysteine--tRNA ligase [Escherichia coli 88.1042]
gi|428957044|ref|ZP_19028746.1| cysteine--tRNA ligase [Escherichia coli 89.0511]
gi|428963369|ref|ZP_19034561.1| cysteine--tRNA ligase [Escherichia coli 90.0091]
gi|428969533|ref|ZP_19040172.1| cysteine--tRNA ligase [Escherichia coli 90.0039]
gi|428975982|ref|ZP_19046160.1| cysteine--tRNA ligase [Escherichia coli 90.2281]
gi|428981706|ref|ZP_19051446.1| cysteine--tRNA ligase [Escherichia coli 93.0055]
gi|428987987|ref|ZP_19057283.1| cysteine--tRNA ligase [Escherichia coli 93.0056]
gi|428993801|ref|ZP_19062712.1| cysteine--tRNA ligase [Escherichia coli 94.0618]
gi|428999904|ref|ZP_19068415.1| cysteine--tRNA ligase [Escherichia coli 95.0183]
gi|429006146|ref|ZP_19074062.1| cysteine--tRNA ligase [Escherichia coli 95.1288]
gi|429012485|ref|ZP_19079742.1| cysteine--tRNA ligase [Escherichia coli 95.0943]
gi|429018693|ref|ZP_19085479.1| cysteine--tRNA ligase [Escherichia coli 96.0428]
gi|429024374|ref|ZP_19090790.1| cysteine--tRNA ligase [Escherichia coli 96.0427]
gi|429030691|ref|ZP_19096572.1| cysteine--tRNA ligase [Escherichia coli 96.0939]
gi|429036880|ref|ZP_19102323.1| cysteine--tRNA ligase [Escherichia coli 96.0932]
gi|429042795|ref|ZP_19107804.1| cysteine--tRNA ligase [Escherichia coli 96.0107]
gi|429048599|ref|ZP_19113258.1| cysteine--tRNA ligase [Escherichia coli 97.0003]
gi|429053964|ref|ZP_19118457.1| cysteine--tRNA ligase [Escherichia coli 97.1742]
gi|429059639|ref|ZP_19123787.1| cysteine--tRNA ligase [Escherichia coli 97.0007]
gi|429065104|ref|ZP_19128968.1| cysteine--tRNA ligase [Escherichia coli 99.0672]
gi|429071666|ref|ZP_19135022.1| cysteine--tRNA ligase [Escherichia coli 99.0678]
gi|429076986|ref|ZP_19140205.1| cysteine--tRNA ligase [Escherichia coli 99.0713]
gi|429824162|ref|ZP_19355669.1| cysteine--tRNA ligase [Escherichia coli 96.0109]
gi|429830525|ref|ZP_19361385.1| cysteine--tRNA ligase [Escherichia coli 97.0010]
gi|444922864|ref|ZP_21242583.1| cysteine--tRNA ligase [Escherichia coli 09BKT078844]
gi|444929179|ref|ZP_21248332.1| cysteine--tRNA ligase [Escherichia coli 99.0814]
gi|444934530|ref|ZP_21253473.1| cysteine--tRNA ligase [Escherichia coli 99.0815]
gi|444940108|ref|ZP_21258756.1| cysteine--tRNA ligase [Escherichia coli 99.0816]
gi|444945697|ref|ZP_21264118.1| cysteine--tRNA ligase [Escherichia coli 99.0839]
gi|444951256|ref|ZP_21269481.1| cysteine--tRNA ligase [Escherichia coli 99.0848]
gi|444962013|ref|ZP_21279766.1| cysteine--tRNA ligase [Escherichia coli 99.1775]
gi|444967744|ref|ZP_21285220.1| cysteine--tRNA ligase [Escherichia coli 99.1793]
gi|444973246|ref|ZP_21290528.1| cysteine--tRNA ligase [Escherichia coli 99.1805]
gi|444978787|ref|ZP_21295783.1| cysteine--tRNA ligase [Escherichia coli ATCC 700728]
gi|444984081|ref|ZP_21300950.1| cysteine--tRNA ligase [Escherichia coli PA11]
gi|444989325|ref|ZP_21306065.1| cysteine--tRNA ligase [Escherichia coli PA19]
gi|444994678|ref|ZP_21311274.1| cysteine--tRNA ligase [Escherichia coli PA13]
gi|445000176|ref|ZP_21316639.1| cysteine--tRNA ligase [Escherichia coli PA2]
gi|445005633|ref|ZP_21321973.1| cysteine--tRNA ligase [Escherichia coli PA47]
gi|445010804|ref|ZP_21326996.1| cysteine--tRNA ligase [Escherichia coli PA48]
gi|445016582|ref|ZP_21332632.1| cysteine--tRNA ligase [Escherichia coli PA8]
gi|445022033|ref|ZP_21337955.1| cysteine--tRNA ligase [Escherichia coli 7.1982]
gi|445027273|ref|ZP_21343052.1| cysteine--tRNA ligase [Escherichia coli 99.1781]
gi|445032769|ref|ZP_21348394.1| cysteine--tRNA ligase [Escherichia coli 99.1762]
gi|445038463|ref|ZP_21353933.1| cysteine--tRNA ligase [Escherichia coli PA35]
gi|445043676|ref|ZP_21359015.1| cysteine--tRNA ligase [Escherichia coli 3.4880]
gi|445049249|ref|ZP_21364418.1| cysteine--tRNA ligase [Escherichia coli 95.0083]
gi|445054899|ref|ZP_21369851.1| cysteine--tRNA ligase [Escherichia coli 99.0670]
gi|452969873|ref|ZP_21968100.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4009]
gi|21264001|sp|Q8XCT9.1|SYC_ECO57 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226710840|sp|B5YPP1.1|SYC_ECO5E RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|12513423|gb|AAG54883.1|AE005233_9 cysteine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
gi|13360046|dbj|BAB34011.1| cysteine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
gi|187769725|gb|EDU33569.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
gi|188017727|gb|EDU55849.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
gi|189003129|gb|EDU72115.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
gi|189357976|gb|EDU76395.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
gi|189362536|gb|EDU80955.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
gi|189373672|gb|EDU92088.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC869]
gi|208728373|gb|EDZ77974.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
gi|208732425|gb|EDZ81113.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
gi|208737119|gb|EDZ84803.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
gi|209158471|gb|ACI35904.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
gi|209777878|gb|ACI87251.1| cysteine tRNA synthetase [Escherichia coli]
gi|209777880|gb|ACI87252.1| cysteine tRNA synthetase [Escherichia coli]
gi|209777882|gb|ACI87253.1| cysteine tRNA synthetase [Escherichia coli]
gi|209777884|gb|ACI87254.1| cysteine tRNA synthetase [Escherichia coli]
gi|209777886|gb|ACI87255.1| cysteine tRNA synthetase [Escherichia coli]
gi|217320399|gb|EEC28823.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
gi|254591114|gb|ACT70475.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
gi|290761310|gb|ADD55271.1| Cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
gi|320192951|gb|EFW67591.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
gi|320638305|gb|EFX08030.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
gi|320643709|gb|EFX12839.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
gi|320649025|gb|EFX17612.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
gi|320654603|gb|EFX22608.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320660389|gb|EFX27860.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
gi|320665083|gb|EFX32180.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
gi|326341299|gb|EGD65091.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
gi|326345924|gb|EGD69663.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
gi|374357541|gb|AEZ39248.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. RM12579]
gi|377900868|gb|EHU65194.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3A]
gi|377901968|gb|EHU66277.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3B]
gi|377913697|gb|EHU77829.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3C]
gi|377918173|gb|EHU82224.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3D]
gi|377920349|gb|EHU84370.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3E]
gi|377931796|gb|EHU95655.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3F]
gi|377933977|gb|EHU97817.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4A]
gi|377939220|gb|EHV02976.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4B]
gi|377949522|gb|EHV13154.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4C]
gi|377951579|gb|EHV15198.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4D]
gi|377954097|gb|EHV17657.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4E]
gi|377966184|gb|EHV29597.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5A]
gi|377967498|gb|EHV30904.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4F]
gi|377973176|gb|EHV36519.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5B]
gi|377973203|gb|EHV36545.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5C]
gi|377981570|gb|EHV44829.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5D]
gi|377987963|gb|EHV51146.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5E]
gi|386794583|gb|AFJ27617.1| cysteinyl-tRNA synthetase [Escherichia coli Xuzhou21]
gi|390650777|gb|EIN29167.1| cysteine--tRNA ligase [Escherichia coli FRIK1996]
gi|390652731|gb|EIN30916.1| cysteine--tRNA ligase [Escherichia coli FDA517]
gi|390653268|gb|EIN31426.1| cysteine--tRNA ligase [Escherichia coli FDA505]
gi|390669715|gb|EIN46323.1| cysteine--tRNA ligase [Escherichia coli 93-001]
gi|390672808|gb|EIN49069.1| cysteine--tRNA ligase [Escherichia coli FRIK1990]
gi|390673820|gb|EIN50038.1| cysteine--tRNA ligase [Escherichia coli FRIK1985]
gi|390688595|gb|EIN63641.1| cysteine--tRNA ligase [Escherichia coli PA3]
gi|390692098|gb|EIN66808.1| cysteine--tRNA ligase [Escherichia coli PA9]
gi|390692968|gb|EIN67620.1| cysteine--tRNA ligase [Escherichia coli PA5]
gi|390710108|gb|EIN83140.1| cysteine--tRNA ligase [Escherichia coli PA15]
gi|390712657|gb|EIN85608.1| cysteine--tRNA ligase [Escherichia coli PA14]
gi|390720402|gb|EIN93114.1| cysteine--tRNA ligase [Escherichia coli PA22]
gi|390733459|gb|EIO05038.1| cysteine--tRNA ligase [Escherichia coli PA25]
gi|390733640|gb|EIO05207.1| cysteine--tRNA ligase [Escherichia coli PA24]
gi|390736822|gb|EIO08144.1| cysteine--tRNA ligase [Escherichia coli PA28]
gi|390751986|gb|EIO21847.1| cysteine--tRNA ligase [Escherichia coli PA31]
gi|390752574|gb|EIO22402.1| cysteine--tRNA ligase [Escherichia coli PA32]
gi|390754888|gb|EIO24444.1| cysteine--tRNA ligase [Escherichia coli PA33]
gi|390762521|gb|EIO31779.1| cysteine--tRNA ligase [Escherichia coli PA40]
gi|390776062|gb|EIO44031.1| cysteine--tRNA ligase [Escherichia coli PA41]
gi|390777986|gb|EIO45758.1| cysteine--tRNA ligase [Escherichia coli PA42]
gi|390783774|gb|EIO51364.1| cysteine--tRNA ligase [Escherichia coli PA39]
gi|390785666|gb|EIO53208.1| cysteine--tRNA ligase [Escherichia coli TW06591]
gi|390792034|gb|EIO59397.1| cysteine--tRNA ligase [Escherichia coli TW10246]
gi|390801904|gb|EIO68955.1| cysteine--tRNA ligase [Escherichia coli TW11039]
gi|390809673|gb|EIO76456.1| cysteine--tRNA ligase [Escherichia coli TW07945]
gi|390811463|gb|EIO78170.1| cysteine--tRNA ligase [Escherichia coli TW09109]
gi|390819156|gb|EIO85505.1| cysteine--tRNA ligase [Escherichia coli TW10119]
gi|390822915|gb|EIO89000.1| cysteine--tRNA ligase [Escherichia coli TW09098]
gi|390837150|gb|EIP01592.1| cysteine--tRNA ligase [Escherichia coli EC4203]
gi|390839982|gb|EIP04057.1| cysteine--tRNA ligase [Escherichia coli EC4196]
gi|390841823|gb|EIP05710.1| cysteine--tRNA ligase [Escherichia coli TW09195]
gi|390855612|gb|EIP18302.1| cysteine--tRNA ligase [Escherichia coli TW14301]
gi|390859718|gb|EIP22057.1| cysteine--tRNA ligase [Escherichia coli EC4421]
gi|390860107|gb|EIP22433.1| cysteine--tRNA ligase [Escherichia coli TW14313]
gi|390871585|gb|EIP32983.1| cysteine--tRNA ligase [Escherichia coli EC4422]
gi|390876160|gb|EIP37154.1| cysteine--tRNA ligase [Escherichia coli EC4013]
gi|390886063|gb|EIP46217.1| cysteine--tRNA ligase [Escherichia coli EC4402]
gi|390888064|gb|EIP47970.1| cysteine--tRNA ligase [Escherichia coli EC4439]
gi|390894587|gb|EIP54089.1| cysteine--tRNA ligase [Escherichia coli EC4436]
gi|390903720|gb|EIP62761.1| cysteine--tRNA ligase [Escherichia coli EC1738]
gi|390910369|gb|EIP69110.1| cysteine--tRNA ligase [Escherichia coli EC4437]
gi|390911837|gb|EIP70518.1| cysteine--tRNA ligase [Escherichia coli EC1734]
gi|390915057|gb|EIP73580.1| cysteine--tRNA ligase [Escherichia coli EC4448]
gi|390924815|gb|EIP82557.1| cysteine--tRNA ligase [Escherichia coli EC1863]
gi|390926145|gb|EIP83744.1| cysteine--tRNA ligase [Escherichia coli EC1845]
gi|408071980|gb|EKH06305.1| cysteine--tRNA ligase [Escherichia coli PA7]
gi|408075425|gb|EKH09657.1| cysteine--tRNA ligase [Escherichia coli FRIK920]
gi|408086000|gb|EKH19557.1| cysteine--tRNA ligase [Escherichia coli PA34]
gi|408090098|gb|EKH23377.1| cysteine--tRNA ligase [Escherichia coli FDA506]
gi|408095488|gb|EKH28464.1| cysteine--tRNA ligase [Escherichia coli FDA507]
gi|408102441|gb|EKH34850.1| cysteine--tRNA ligase [Escherichia coli FDA504]
gi|408116641|gb|EKH47923.1| cysteine--tRNA ligase [Escherichia coli FRIK1997]
gi|408122122|gb|EKH53006.1| cysteine--tRNA ligase [Escherichia coli NE1487]
gi|408130229|gb|EKH60390.1| cysteine--tRNA ligase [Escherichia coli NE037]
gi|408132284|gb|EKH62273.1| cysteine--tRNA ligase [Escherichia coli FRIK2001]
gi|408141508|gb|EKH70976.1| cysteine--tRNA ligase [Escherichia coli PA4]
gi|408150296|gb|EKH78894.1| cysteine--tRNA ligase [Escherichia coli PA23]
gi|408152772|gb|EKH81193.1| cysteine--tRNA ligase [Escherichia coli PA49]
gi|408158068|gb|EKH86205.1| cysteine--tRNA ligase [Escherichia coli PA45]
gi|408166906|gb|EKH94446.1| cysteine--tRNA ligase [Escherichia coli TT12B]
gi|408172216|gb|EKH99296.1| cysteine--tRNA ligase [Escherichia coli MA6]
gi|408174594|gb|EKI01569.1| cysteine--tRNA ligase [Escherichia coli 5905]
gi|408186998|gb|EKI12991.1| cysteine--tRNA ligase [Escherichia coli CB7326]
gi|408191909|gb|EKI17504.1| cysteine--tRNA ligase [Escherichia coli EC96038]
gi|408191966|gb|EKI17555.1| cysteine--tRNA ligase [Escherichia coli 5412]
gi|408233008|gb|EKI56159.1| cysteine--tRNA ligase [Escherichia coli PA38]
gi|408239030|gb|EKI61795.1| cysteine--tRNA ligase [Escherichia coli EC1735]
gi|408249030|gb|EKI70991.1| cysteine--tRNA ligase [Escherichia coli EC1736]
gi|408253092|gb|EKI74708.1| cysteine--tRNA ligase [Escherichia coli EC1737]
gi|408259490|gb|EKI80667.1| cysteine--tRNA ligase [Escherichia coli EC1846]
gi|408268363|gb|EKI88743.1| cysteine--tRNA ligase [Escherichia coli EC1847]
gi|408269982|gb|EKI90207.1| cysteine--tRNA ligase [Escherichia coli EC1848]
gi|408278886|gb|EKI98561.1| cysteine--tRNA ligase [Escherichia coli EC1849]
gi|408285285|gb|EKJ04329.1| cysteine--tRNA ligase [Escherichia coli EC1850]
gi|408287790|gb|EKJ06641.1| cysteine--tRNA ligase [Escherichia coli EC1856]
gi|408300524|gb|EKJ18217.1| cysteine--tRNA ligase [Escherichia coli EC1862]
gi|408300942|gb|EKJ18617.1| cysteine--tRNA ligase [Escherichia coli EC1864]
gi|408318019|gb|EKJ34244.1| cysteine--tRNA ligase [Escherichia coli EC1868]
gi|408318077|gb|EKJ34294.1| cysteine--tRNA ligase [Escherichia coli EC1866]
gi|408331424|gb|EKJ46595.1| cysteine--tRNA ligase [Escherichia coli EC1869]
gi|408336739|gb|EKJ51489.1| cysteine--tRNA ligase [Escherichia coli NE098]
gi|408338133|gb|EKJ52794.1| cysteine--tRNA ligase [Escherichia coli EC1870]
gi|408350506|gb|EKJ64373.1| cysteine--tRNA ligase [Escherichia coli FRIK523]
gi|408353100|gb|EKJ66624.1| cysteine--tRNA ligase [Escherichia coli 0.1304]
gi|408558784|gb|EKK35142.1| cysteine--tRNA ligase [Escherichia coli 5.2239]
gi|408559209|gb|EKK35551.1| cysteine--tRNA ligase [Escherichia coli 3.4870]
gi|408560107|gb|EKK36388.1| cysteine--tRNA ligase [Escherichia coli 6.0172]
gi|408585274|gb|EKK60165.1| cysteine--tRNA ligase [Escherichia coli 8.0586]
gi|408590183|gb|EKK64674.1| cysteine--tRNA ligase [Escherichia coli 8.2524]
gi|408591951|gb|EKK66355.1| cysteine--tRNA ligase [Escherichia coli 10.0833]
gi|408604153|gb|EKK77745.1| cysteine--tRNA ligase [Escherichia coli 10.0869]
gi|408605733|gb|EKK79226.1| cysteine--tRNA ligase [Escherichia coli 8.0416]
gi|408610407|gb|EKK83779.1| cysteine--tRNA ligase [Escherichia coli 88.0221]
gi|408617074|gb|EKK90201.1| cysteine--tRNA ligase [Escherichia coli 10.0821]
gi|427214570|gb|EKV83868.1| cysteine--tRNA ligase [Escherichia coli 88.1042]
gi|427216846|gb|EKV85939.1| cysteine--tRNA ligase [Escherichia coli 89.0511]
gi|427217114|gb|EKV86187.1| cysteine--tRNA ligase [Escherichia coli 88.1467]
gi|427233881|gb|EKW01600.1| cysteine--tRNA ligase [Escherichia coli 90.2281]
gi|427233952|gb|EKW01662.1| cysteine--tRNA ligase [Escherichia coli 90.0039]
gi|427236143|gb|EKW03739.1| cysteine--tRNA ligase [Escherichia coli 90.0091]
gi|427251392|gb|EKW17971.1| cysteine--tRNA ligase [Escherichia coli 93.0056]
gi|427252944|gb|EKW19403.1| cysteine--tRNA ligase [Escherichia coli 93.0055]
gi|427254045|gb|EKW20420.1| cysteine--tRNA ligase [Escherichia coli 94.0618]
gi|427270248|gb|EKW35139.1| cysteine--tRNA ligase [Escherichia coli 95.0943]
gi|427270732|gb|EKW35605.1| cysteine--tRNA ligase [Escherichia coli 95.0183]
gi|427275842|gb|EKW40436.1| cysteine--tRNA ligase [Escherichia coli 95.1288]
gi|427286257|gb|EKW50113.1| cysteine--tRNA ligase [Escherichia coli 96.0428]
gi|427291969|gb|EKW55334.1| cysteine--tRNA ligase [Escherichia coli 96.0427]
gi|427293714|gb|EKW56954.1| cysteine--tRNA ligase [Escherichia coli 96.0939]
gi|427304690|gb|EKW67320.1| cysteine--tRNA ligase [Escherichia coli 97.0003]
gi|427306228|gb|EKW68767.1| cysteine--tRNA ligase [Escherichia coli 96.0932]
gi|427310676|gb|EKW72913.1| cysteine--tRNA ligase [Escherichia coli 96.0107]
gi|427321491|gb|EKW83180.1| cysteine--tRNA ligase [Escherichia coli 97.1742]
gi|427322234|gb|EKW83875.1| cysteine--tRNA ligase [Escherichia coli 97.0007]
gi|427334224|gb|EKW95301.1| cysteine--tRNA ligase [Escherichia coli 99.0713]
gi|427334272|gb|EKW95345.1| cysteine--tRNA ligase [Escherichia coli 99.0678]
gi|427336753|gb|EKW97707.1| cysteine--tRNA ligase [Escherichia coli 99.0672]
gi|429260091|gb|EKY43702.1| cysteine--tRNA ligase [Escherichia coli 96.0109]
gi|429261797|gb|EKY45196.1| cysteine--tRNA ligase [Escherichia coli 97.0010]
gi|444542382|gb|ELV21747.1| cysteine--tRNA ligase [Escherichia coli 99.0814]
gi|444550651|gb|ELV28705.1| cysteine--tRNA ligase [Escherichia coli 09BKT078844]
gi|444551750|gb|ELV29635.1| cysteine--tRNA ligase [Escherichia coli 99.0815]
gi|444564861|gb|ELV41771.1| cysteine--tRNA ligase [Escherichia coli 99.0839]
gi|444567061|gb|ELV43837.1| cysteine--tRNA ligase [Escherichia coli 99.0816]
gi|444571215|gb|ELV47705.1| cysteine--tRNA ligase [Escherichia coli 99.0848]
gi|444585099|gb|ELV60684.1| cysteine--tRNA ligase [Escherichia coli 99.1775]
gi|444586042|gb|ELV61570.1| cysteine--tRNA ligase [Escherichia coli 99.1793]
gi|444599674|gb|ELV74539.1| cysteine--tRNA ligase [Escherichia coli ATCC 700728]
gi|444600191|gb|ELV75035.1| cysteine--tRNA ligase [Escherichia coli PA11]
gi|444608265|gb|ELV82805.1| cysteine--tRNA ligase [Escherichia coli 99.1805]
gi|444614298|gb|ELV88527.1| cysteine--tRNA ligase [Escherichia coli PA13]
gi|444615064|gb|ELV89283.1| cysteine--tRNA ligase [Escherichia coli PA19]
gi|444623354|gb|ELV97283.1| cysteine--tRNA ligase [Escherichia coli PA2]
gi|444632495|gb|ELW06063.1| cysteine--tRNA ligase [Escherichia coli PA48]
gi|444632775|gb|ELW06329.1| cysteine--tRNA ligase [Escherichia coli PA47]
gi|444637518|gb|ELW10891.1| cysteine--tRNA ligase [Escherichia coli PA8]
gi|444647524|gb|ELW20489.1| cysteine--tRNA ligase [Escherichia coli 7.1982]
gi|444650033|gb|ELW22890.1| cysteine--tRNA ligase [Escherichia coli 99.1781]
gi|444653772|gb|ELW26479.1| cysteine--tRNA ligase [Escherichia coli 99.1762]
gi|444662515|gb|ELW34768.1| cysteine--tRNA ligase [Escherichia coli PA35]
gi|444667131|gb|ELW39178.1| cysteine--tRNA ligase [Escherichia coli 3.4880]
gi|444672647|gb|ELW44344.1| cysteine--tRNA ligase [Escherichia coli 95.0083]
gi|444674421|gb|ELW45960.1| cysteine--tRNA ligase [Escherichia coli 99.0670]
Length = 461
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|26246536|ref|NP_752575.1| cysteinyl-tRNA synthetase [Escherichia coli CFT073]
gi|91209601|ref|YP_539587.1| cysteinyl-tRNA synthetase [Escherichia coli UTI89]
gi|117622783|ref|YP_851696.1| cysteinyl-tRNA synthetase [Escherichia coli APEC O1]
gi|157155754|ref|YP_001461714.1| cysteinyl-tRNA synthetase [Escherichia coli E24377A]
gi|157160050|ref|YP_001457368.1| cysteinyl-tRNA synthetase [Escherichia coli HS]
gi|162139357|ref|YP_688055.2| cysteinyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
gi|170021093|ref|YP_001726047.1| cysteinyl-tRNA synthetase [Escherichia coli ATCC 8739]
gi|191172271|ref|ZP_03033813.1| cysteinyl tRNA synthetase [Escherichia coli F11]
gi|193064170|ref|ZP_03045254.1| cysteinyl tRNA synthetase [Escherichia coli E22]
gi|193067585|ref|ZP_03048552.1| cysteinyl tRNA synthetase [Escherichia coli E110019]
gi|194429574|ref|ZP_03062094.1| cysteinyl tRNA synthetase [Escherichia coli B171]
gi|194437452|ref|ZP_03069549.1| cysteinyl tRNA synthetase [Escherichia coli 101-1]
gi|209917742|ref|YP_002291826.1| cysteinyl-tRNA synthetase [Escherichia coli SE11]
gi|218553090|ref|YP_002386003.1| cysteinyl-tRNA synthetase [Escherichia coli IAI1]
gi|218557437|ref|YP_002390350.1| cysteinyl-tRNA synthetase [Escherichia coli S88]
gi|218688385|ref|YP_002396597.1| cysteinyl-tRNA synthetase [Escherichia coli ED1a]
gi|218693989|ref|YP_002401656.1| cysteinyl-tRNA synthetase [Escherichia coli 55989]
gi|218698893|ref|YP_002406522.1| cysteinyl-tRNA synthetase [Escherichia coli IAI39]
gi|227884465|ref|ZP_04002270.1| cysteinyl-tRNA synthetase [Escherichia coli 83972]
gi|237707473|ref|ZP_04537954.1| cysteinyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
gi|251784032|ref|YP_002998336.1| cysteinyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|253774486|ref|YP_003037317.1| cysteinyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254160594|ref|YP_003043702.1| cysteinyl-tRNA synthetase [Escherichia coli B str. REL606]
gi|254287398|ref|YP_003053146.1| cysteinyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|260842721|ref|YP_003220499.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
gi|293408676|ref|ZP_06652515.1| cysteinyl-tRNA synthetase [Escherichia coli B354]
gi|293413782|ref|ZP_06656431.1| cysteinyl-tRNA synthetase [Escherichia coli B185]
gi|293418593|ref|ZP_06661028.1| cysteinyl-tRNA synthetase [Escherichia coli B088]
gi|297517317|ref|ZP_06935703.1| cysteinyl-tRNA synthetase [Escherichia coli OP50]
gi|300819552|ref|ZP_07099746.1| cysteinyl-tRNA synthetase [Escherichia coli MS 107-1]
gi|300820228|ref|ZP_07100380.1| cysteinyl-tRNA synthetase [Escherichia coli MS 119-7]
gi|300903202|ref|ZP_07121133.1| cysteinyl-tRNA synthetase [Escherichia coli MS 84-1]
gi|300919177|ref|ZP_07135707.1| cysteinyl-tRNA synthetase [Escherichia coli MS 115-1]
gi|300925801|ref|ZP_07141656.1| cysteinyl-tRNA synthetase [Escherichia coli MS 182-1]
gi|300929112|ref|ZP_07144605.1| cysteinyl-tRNA synthetase [Escherichia coli MS 187-1]
gi|300940519|ref|ZP_07155089.1| cysteinyl-tRNA synthetase [Escherichia coli MS 21-1]
gi|300987704|ref|ZP_07178317.1| cysteinyl-tRNA synthetase [Escherichia coli MS 45-1]
gi|301049738|ref|ZP_07196683.1| cysteinyl-tRNA synthetase [Escherichia coli MS 185-1]
gi|301301682|ref|ZP_07207817.1| cysteinyl-tRNA synthetase [Escherichia coli MS 124-1]
gi|301327827|ref|ZP_07221017.1| cysteinyl-tRNA synthetase [Escherichia coli MS 78-1]
gi|307314558|ref|ZP_07594160.1| cysteinyl-tRNA synthetase [Escherichia coli W]
gi|312970621|ref|ZP_07784802.1| cysteinyl-tRNA synthetase [Escherichia coli 1827-70]
gi|331651486|ref|ZP_08352506.1| cysteine--tRNA ligase [Escherichia coli M718]
gi|331656583|ref|ZP_08357545.1| cysteine--tRNA ligase [Escherichia coli TA206]
gi|331661914|ref|ZP_08362837.1| cysteine--tRNA ligase [Escherichia coli TA143]
gi|331666881|ref|ZP_08367755.1| cysteine--tRNA ligase [Escherichia coli TA271]
gi|331672057|ref|ZP_08372853.1| cysteine--tRNA ligase [Escherichia coli TA280]
gi|331676195|ref|ZP_08376907.1| cysteine--tRNA ligase [Escherichia coli H591]
gi|331681920|ref|ZP_08382553.1| cysteine--tRNA ligase [Escherichia coli H299]
gi|332281678|ref|ZP_08394091.1| cysteinyl-tRNA synthetase [Shigella sp. D9]
gi|378714071|ref|YP_005278964.1| cysteinyl-tRNA synthetase [Escherichia coli KO11FL]
gi|386598243|ref|YP_006099749.1| cysteinyl-tRNA synthetase [Escherichia coli IHE3034]
gi|386605520|ref|YP_006111820.1| cysteinyl-tRNA synthetase [Escherichia coli UM146]
gi|386607882|ref|YP_006123368.1| cysteinyl-tRNA synthetase [Escherichia coli W]
gi|386612720|ref|YP_006132386.1| cysteinyl-tRNA synthetase [Escherichia coli UMNK88]
gi|386622899|ref|YP_006142627.1| cysteinyl-tRNA synthetase [Escherichia coli O7:K1 str. CE10]
gi|386628111|ref|YP_006147831.1| cysteinyl-tRNA synthetase [Escherichia coli str. 'clone D i2']
gi|386633031|ref|YP_006152750.1| cysteinyl-tRNA synthetase [Escherichia coli str. 'clone D i14']
gi|386637937|ref|YP_006104735.1| cysteinyl-tRNA synthetase [Escherichia coli ABU 83972]
gi|386702670|ref|YP_006166507.1| cysteinyl-tRNA synthetase [Escherichia coli KO11FL]
gi|386708326|ref|YP_006172047.1| cysteinyl-tRNA synthetase [Escherichia coli W]
gi|387606036|ref|YP_006094892.1| cysteinyl-tRNA synthetase [Escherichia coli 042]
gi|387611052|ref|YP_006114168.1| cysteinyl-tRNA synthetase [Escherichia coli ETEC H10407]
gi|404373854|ref|ZP_10979084.1| cysteinyl-tRNA synthetase [Escherichia sp. 1_1_43]
gi|407467973|ref|YP_006785585.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407483296|ref|YP_006780445.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
2011C-3493]
gi|410483848|ref|YP_006771394.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
2009EL-2050]
gi|415800124|ref|ZP_11499194.1| cysteinyl-tRNA synthetase [Escherichia coli E128010]
gi|415814734|ref|ZP_11506332.1| cysteinyl-tRNA synthetase [Escherichia coli LT-68]
gi|415828206|ref|ZP_11514822.1| cysteinyl-tRNA synthetase [Escherichia coli OK1357]
gi|415862805|ref|ZP_11536245.1| cysteinyl-tRNA synthetase [Escherichia coli MS 85-1]
gi|415877070|ref|ZP_11543353.1| cysteine--tRNA ligase [Escherichia coli MS 79-10]
gi|416283944|ref|ZP_11647051.1| Cysteinyl-tRNA synthetase [Shigella boydii ATCC 9905]
gi|416341862|ref|ZP_11676298.1| Cysteinyl-tRNA synthetase [Escherichia coli EC4100B]
gi|416895976|ref|ZP_11925860.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_7v]
gi|417118733|ref|ZP_11969251.1| cysteine--tRNA ligase [Escherichia coli 1.2741]
gi|417121043|ref|ZP_11970497.1| cysteine--tRNA ligase [Escherichia coli 97.0246]
gi|417132399|ref|ZP_11977184.1| cysteine--tRNA ligase [Escherichia coli 5.0588]
gi|417139602|ref|ZP_11983024.1| cysteine--tRNA ligase [Escherichia coli 97.0259]
gi|417144232|ref|ZP_11986038.1| cysteine--tRNA ligase [Escherichia coli 1.2264]
gi|417152979|ref|ZP_11991770.1| cysteine--tRNA ligase [Escherichia coli 96.0497]
gi|417163431|ref|ZP_11998667.1| cysteine--tRNA ligase [Escherichia coli 99.0741]
gi|417174830|ref|ZP_12004626.1| cysteine--tRNA ligase [Escherichia coli 3.2608]
gi|417179210|ref|ZP_12007310.1| cysteine--tRNA ligase [Escherichia coli 93.0624]
gi|417225306|ref|ZP_12028597.1| cysteine--tRNA ligase [Escherichia coli 96.154]
gi|417229854|ref|ZP_12031440.1| cysteine--tRNA ligase [Escherichia coli 5.0959]
gi|417246914|ref|ZP_12040015.1| cysteine--tRNA ligase [Escherichia coli 9.0111]
gi|417267689|ref|ZP_12055050.1| cysteine--tRNA ligase [Escherichia coli 3.3884]
gi|417288269|ref|ZP_12075554.1| cysteine--tRNA ligase [Escherichia coli TW07793]
gi|417307037|ref|ZP_12093915.1| Cysteinyl-tRNA synthetase [Escherichia coli PCN033]
gi|417579750|ref|ZP_12230571.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_B2F1]
gi|417595456|ref|ZP_12246124.1| cysteinyl-tRNA synthetase [Escherichia coli 3030-1]
gi|417600814|ref|ZP_12251399.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_94C]
gi|417606574|ref|ZP_12257102.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_DG131-3]
gi|417621796|ref|ZP_12272125.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_H.1.8]
gi|417637834|ref|ZP_12288007.1| cysteinyl-tRNA synthetase [Escherichia coli TX1999]
gi|417665611|ref|ZP_12315178.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_O31]
gi|417700365|ref|ZP_12349505.1| cysteinyl-tRNA synthetase [Shigella flexneri K-218]
gi|417706059|ref|ZP_12355124.1| cysteinyl-tRNA synthetase [Shigella flexneri VA-6]
gi|417711094|ref|ZP_12360100.1| cysteinyl-tRNA synthetase [Shigella flexneri K-272]
gi|417716053|ref|ZP_12364986.1| cysteinyl-tRNA synthetase [Shigella flexneri K-227]
gi|417737339|ref|ZP_12385945.1| cysteinyl-tRNA synthetase [Shigella flexneri 4343-70]
gi|417754323|ref|ZP_12402418.1| cysteinyl-tRNA synthetase [Escherichia coli DEC2B]
gi|417803882|ref|ZP_12450917.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. LB226692]
gi|417826525|ref|ZP_12473103.1| cysteinyl-tRNA synthetase [Shigella flexneri J1713]
gi|417831633|ref|ZP_12478155.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 01-09591]
gi|417863774|ref|ZP_12508821.1| hypothetical protein C22711_0707 [Escherichia coli O104:H4 str.
C227-11]
gi|418042639|ref|ZP_12680830.1| cysteinyl-tRNA synthetase [Escherichia coli W26]
gi|418253733|ref|ZP_12878730.1| cysteinyl-tRNA synthetase [Shigella flexneri 6603-63]
gi|418944980|ref|ZP_13497936.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H43 str. T22]
gi|419168518|ref|ZP_13712916.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7A]
gi|419179511|ref|ZP_13723136.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7C]
gi|419185072|ref|ZP_13728594.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7D]
gi|419190319|ref|ZP_13733787.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7E]
gi|419276658|ref|ZP_13818926.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10E]
gi|419287990|ref|ZP_13830107.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11A]
gi|419293328|ref|ZP_13835389.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11B]
gi|419298769|ref|ZP_13840786.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11C]
gi|419305052|ref|ZP_13846966.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11D]
gi|419310117|ref|ZP_13851993.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11E]
gi|419315395|ref|ZP_13857223.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12A]
gi|419321194|ref|ZP_13862934.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12B]
gi|419327418|ref|ZP_13869051.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12C]
gi|419332855|ref|ZP_13874417.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12D]
gi|419338277|ref|ZP_13879766.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12E]
gi|419344172|ref|ZP_13885556.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13A]
gi|419348605|ref|ZP_13889958.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13B]
gi|419353519|ref|ZP_13894803.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13C]
gi|419358851|ref|ZP_13900082.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13D]
gi|419363853|ref|ZP_13905035.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13E]
gi|419368812|ref|ZP_13909941.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14A]
gi|419373998|ref|ZP_13915054.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14B]
gi|419379419|ref|ZP_13920399.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14C]
gi|419384682|ref|ZP_13925584.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14D]
gi|419699440|ref|ZP_14227056.1| cysteinyl-tRNA synthetase [Escherichia coli SCI-07]
gi|419804372|ref|ZP_14329531.1| cysteinyl-tRNA synthetase [Escherichia coli AI27]
gi|419865801|ref|ZP_14388178.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H25 str. CVM9340]
gi|419871660|ref|ZP_14393712.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H2 str. CVM9450]
gi|419915388|ref|ZP_14433754.1| cysteinyl-tRNA synthetase [Escherichia coli KD1]
gi|419924320|ref|ZP_14442211.1| cysteinyl-tRNA synthetase [Escherichia coli 541-15]
gi|419928907|ref|ZP_14446607.1| cysteinyl-tRNA synthetase [Escherichia coli 541-1]
gi|419945465|ref|ZP_14461907.1| cysteinyl-tRNA synthetase [Escherichia coli HM605]
gi|419948837|ref|ZP_14465102.1| cysteinyl-tRNA synthetase [Escherichia coli CUMT8]
gi|420319117|ref|ZP_14820973.1| cysteinyl-tRNA synthetase [Shigella flexneri 2850-71]
gi|420329715|ref|ZP_14831420.1| cysteinyl-tRNA synthetase [Shigella flexneri K-1770]
gi|420384166|ref|ZP_14883554.1| cysteinyl-tRNA synthetase [Escherichia coli EPECa12]
gi|420389867|ref|ZP_14889139.1| cysteinyl-tRNA synthetase [Escherichia coli EPEC C342-62]
gi|421777864|ref|ZP_16214453.1| cysteinyl-tRNA synthetase [Escherichia coli AD30]
gi|422352435|ref|ZP_16433217.1| cysteinyl-tRNA synthetase [Escherichia coli MS 117-3]
gi|422356189|ref|ZP_16436878.1| cysteinyl-tRNA synthetase [Escherichia coli MS 110-3]
gi|422362939|ref|ZP_16443487.1| cysteinyl-tRNA synthetase [Escherichia coli MS 153-1]
gi|422369164|ref|ZP_16449567.1| cysteinyl-tRNA synthetase [Escherichia coli MS 16-3]
gi|422378165|ref|ZP_16458388.1| cysteinyl-tRNA synthetase [Escherichia coli MS 60-1]
gi|422382389|ref|ZP_16462549.1| cysteinyl-tRNA synthetase [Escherichia coli MS 57-2]
gi|422748407|ref|ZP_16802320.1| cysteinyl-tRNA synthetase [Escherichia coli H252]
gi|422753183|ref|ZP_16807010.1| cysteinyl-tRNA synthetase [Escherichia coli H263]
gi|422763319|ref|ZP_16817074.1| cysteinyl-tRNA synthetase [Escherichia coli E1167]
gi|422777227|ref|ZP_16830880.1| cysteinyl-tRNA synthetase [Escherichia coli H120]
gi|422782673|ref|ZP_16835458.1| cysteinyl-tRNA synthetase [Escherichia coli TW10509]
gi|422802421|ref|ZP_16850915.1| cysteinyl-tRNA synthetase [Escherichia coli M863]
gi|422827700|ref|ZP_16875873.1| cysteinyl-tRNA synthetase [Escherichia coli B093]
gi|422839049|ref|ZP_16887021.1| cysteinyl-tRNA synthetase [Escherichia coli H397]
gi|422960410|ref|ZP_16971858.1| cysteinyl-tRNA synthetase [Escherichia coli H494]
gi|422978523|ref|ZP_16977717.1| cysteinyl-tRNA synthetase [Escherichia coli TA124]
gi|422991239|ref|ZP_16982010.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. C227-11]
gi|422993178|ref|ZP_16983942.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. C236-11]
gi|422998389|ref|ZP_16989145.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 09-7901]
gi|423006853|ref|ZP_16997596.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 04-8351]
gi|423008494|ref|ZP_16999232.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-3677]
gi|423022680|ref|ZP_17013383.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4404]
gi|423027834|ref|ZP_17018527.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4522]
gi|423033671|ref|ZP_17024355.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4623]
gi|423036537|ref|ZP_17027211.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C1]
gi|423041657|ref|ZP_17032324.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C2]
gi|423048343|ref|ZP_17039000.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C3]
gi|423051927|ref|ZP_17040735.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C4]
gi|423058892|ref|ZP_17047688.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C5]
gi|423710290|ref|ZP_17684640.1| cysteinyl-tRNA synthetase [Escherichia coli B799]
gi|424837002|ref|ZP_18261639.1| cysteinyl-tRNA synthetase [Shigella flexneri 5a str. M90T]
gi|425287081|ref|ZP_18678015.1| cysteine--tRNA ligase [Escherichia coli 3006]
gi|425298721|ref|ZP_18688771.1| cysteine--tRNA ligase [Escherichia coli 07798]
gi|425304029|ref|ZP_18693817.1| cysteine--tRNA ligase [Escherichia coli N1]
gi|425421148|ref|ZP_18802373.1| cysteine--tRNA ligase [Escherichia coli 0.1288]
gi|427803585|ref|ZP_18970652.1| cysteine tRNA synthetase [Escherichia coli chi7122]
gi|427808202|ref|ZP_18975267.1| cysteine tRNA synthetase [Escherichia coli]
gi|429722721|ref|ZP_19257618.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429774816|ref|ZP_19306819.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02030]
gi|429780079|ref|ZP_19312032.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429784131|ref|ZP_19316044.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02092]
gi|429789469|ref|ZP_19321344.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02093]
gi|429795699|ref|ZP_19327525.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02281]
gi|429801625|ref|ZP_19333403.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02318]
gi|429805257|ref|ZP_19337004.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02913]
gi|429810068|ref|ZP_19341770.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03439]
gi|429815828|ref|ZP_19347487.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-04080]
gi|429821416|ref|ZP_19353029.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03943]
gi|429907091|ref|ZP_19373060.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429911288|ref|ZP_19377244.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9941]
gi|429917124|ref|ZP_19383064.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429922162|ref|ZP_19388083.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429927980|ref|ZP_19393886.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429931912|ref|ZP_19397807.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429933514|ref|ZP_19399404.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429939168|ref|ZP_19405042.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429946811|ref|ZP_19412666.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429949443|ref|ZP_19415291.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429957727|ref|ZP_19423556.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0466]
gi|432356871|ref|ZP_19600118.1| cysteinyl-tRNA synthetase [Escherichia coli KTE4]
gi|432361277|ref|ZP_19604474.1| cysteinyl-tRNA synthetase [Escherichia coli KTE5]
gi|432368498|ref|ZP_19611603.1| cysteinyl-tRNA synthetase [Escherichia coli KTE10]
gi|432375601|ref|ZP_19618615.1| cysteinyl-tRNA synthetase [Escherichia coli KTE12]
gi|432410589|ref|ZP_19653272.1| cysteinyl-tRNA synthetase [Escherichia coli KTE39]
gi|432430637|ref|ZP_19673082.1| cysteinyl-tRNA synthetase [Escherichia coli KTE187]
gi|432435165|ref|ZP_19677566.1| cysteinyl-tRNA synthetase [Escherichia coli KTE188]
gi|432439835|ref|ZP_19682198.1| cysteinyl-tRNA synthetase [Escherichia coli KTE189]
gi|432444959|ref|ZP_19687268.1| cysteinyl-tRNA synthetase [Escherichia coli KTE191]
gi|432453139|ref|ZP_19695381.1| cysteinyl-tRNA synthetase [Escherichia coli KTE193]
gi|432455449|ref|ZP_19697651.1| cysteinyl-tRNA synthetase [Escherichia coli KTE201]
gi|432464537|ref|ZP_19706645.1| cysteinyl-tRNA synthetase [Escherichia coli KTE205]
gi|432469956|ref|ZP_19712009.1| cysteinyl-tRNA synthetase [Escherichia coli KTE206]
gi|432479879|ref|ZP_19721844.1| cysteinyl-tRNA synthetase [Escherichia coli KTE210]
gi|432484246|ref|ZP_19726170.1| cysteinyl-tRNA synthetase [Escherichia coli KTE212]
gi|432492823|ref|ZP_19734661.1| cysteinyl-tRNA synthetase [Escherichia coli KTE213]
gi|432494389|ref|ZP_19736207.1| cysteinyl-tRNA synthetase [Escherichia coli KTE214]
gi|432503229|ref|ZP_19744966.1| cysteinyl-tRNA synthetase [Escherichia coli KTE220]
gi|432522673|ref|ZP_19759812.1| cysteinyl-tRNA synthetase [Escherichia coli KTE230]
gi|432529894|ref|ZP_19766937.1| cysteinyl-tRNA synthetase [Escherichia coli KTE233]
gi|432532707|ref|ZP_19769707.1| cysteinyl-tRNA synthetase [Escherichia coli KTE234]
gi|432541902|ref|ZP_19778763.1| cysteinyl-tRNA synthetase [Escherichia coli KTE236]
gi|432547246|ref|ZP_19784043.1| cysteinyl-tRNA synthetase [Escherichia coli KTE237]
gi|432552535|ref|ZP_19789266.1| cysteinyl-tRNA synthetase [Escherichia coli KTE47]
gi|432567359|ref|ZP_19803886.1| cysteinyl-tRNA synthetase [Escherichia coli KTE53]
gi|432572521|ref|ZP_19809012.1| cysteinyl-tRNA synthetase [Escherichia coli KTE55]
gi|432579200|ref|ZP_19815634.1| cysteinyl-tRNA synthetase [Escherichia coli KTE56]
gi|432582635|ref|ZP_19819045.1| cysteinyl-tRNA synthetase [Escherichia coli KTE57]
gi|432586825|ref|ZP_19823197.1| cysteinyl-tRNA synthetase [Escherichia coli KTE58]
gi|432591639|ref|ZP_19827968.1| cysteinyl-tRNA synthetase [Escherichia coli KTE60]
gi|432596411|ref|ZP_19832700.1| cysteinyl-tRNA synthetase [Escherichia coli KTE62]
gi|432601044|ref|ZP_19837298.1| cysteinyl-tRNA synthetase [Escherichia coli KTE66]
gi|432606405|ref|ZP_19842601.1| cysteinyl-tRNA synthetase [Escherichia coli KTE67]
gi|432620629|ref|ZP_19856675.1| cysteinyl-tRNA synthetase [Escherichia coli KTE76]
gi|432650049|ref|ZP_19885811.1| cysteinyl-tRNA synthetase [Escherichia coli KTE87]
gi|432669451|ref|ZP_19905000.1| cysteinyl-tRNA synthetase [Escherichia coli KTE119]
gi|432678122|ref|ZP_19913546.1| cysteinyl-tRNA synthetase [Escherichia coli KTE142]
gi|432678954|ref|ZP_19914357.1| cysteinyl-tRNA synthetase [Escherichia coli KTE143]
gi|432712244|ref|ZP_19947296.1| cysteinyl-tRNA synthetase [Escherichia coli KTE8]
gi|432717537|ref|ZP_19952539.1| cysteinyl-tRNA synthetase [Escherichia coli KTE9]
gi|432731249|ref|ZP_19966087.1| cysteinyl-tRNA synthetase [Escherichia coli KTE45]
gi|432748981|ref|ZP_19983604.1| cysteinyl-tRNA synthetase [Escherichia coli KTE29]
gi|432753323|ref|ZP_19987891.1| cysteinyl-tRNA synthetase [Escherichia coli KTE22]
gi|432758327|ref|ZP_19992831.1| cysteinyl-tRNA synthetase [Escherichia coli KTE46]
gi|432763814|ref|ZP_19998266.1| cysteinyl-tRNA synthetase [Escherichia coli KTE48]
gi|432769338|ref|ZP_20003702.1| cysteinyl-tRNA synthetase [Escherichia coli KTE50]
gi|432773705|ref|ZP_20007995.1| cysteinyl-tRNA synthetase [Escherichia coli KTE54]
gi|432777378|ref|ZP_20011632.1| cysteinyl-tRNA synthetase [Escherichia coli KTE59]
gi|432782428|ref|ZP_20016614.1| cysteinyl-tRNA synthetase [Escherichia coli KTE63]
gi|432786174|ref|ZP_20020342.1| cysteinyl-tRNA synthetase [Escherichia coli KTE65]
gi|432800808|ref|ZP_20034796.1| cysteinyl-tRNA synthetase [Escherichia coli KTE84]
gi|432804605|ref|ZP_20038551.1| cysteinyl-tRNA synthetase [Escherichia coli KTE91]
gi|432812631|ref|ZP_20046480.1| cysteinyl-tRNA synthetase [Escherichia coli KTE101]
gi|432814022|ref|ZP_20047833.1| cysteinyl-tRNA synthetase [Escherichia coli KTE115]
gi|432819845|ref|ZP_20053559.1| cysteinyl-tRNA synthetase [Escherichia coli KTE118]
gi|432825974|ref|ZP_20059631.1| cysteinyl-tRNA synthetase [Escherichia coli KTE123]
gi|432830510|ref|ZP_20064119.1| cysteinyl-tRNA synthetase [Escherichia coli KTE135]
gi|432833574|ref|ZP_20067122.1| cysteinyl-tRNA synthetase [Escherichia coli KTE136]
gi|432838074|ref|ZP_20071567.1| cysteinyl-tRNA synthetase [Escherichia coli KTE140]
gi|432842808|ref|ZP_20076229.1| cysteinyl-tRNA synthetase [Escherichia coli KTE141]
gi|432848666|ref|ZP_20080179.1| cysteinyl-tRNA synthetase [Escherichia coli KTE144]
gi|432859288|ref|ZP_20085359.1| cysteinyl-tRNA synthetase [Escherichia coli KTE146]
gi|432873191|ref|ZP_20092889.1| cysteinyl-tRNA synthetase [Escherichia coli KTE147]
gi|432880015|ref|ZP_20096835.1| cysteinyl-tRNA synthetase [Escherichia coli KTE154]
gi|432897398|ref|ZP_20108307.1| cysteinyl-tRNA synthetase [Escherichia coli KTE192]
gi|432932861|ref|ZP_20132715.1| cysteinyl-tRNA synthetase [Escherichia coli KTE184]
gi|432959943|ref|ZP_20150198.1| cysteinyl-tRNA synthetase [Escherichia coli KTE202]
gi|432966635|ref|ZP_20155554.1| cysteinyl-tRNA synthetase [Escherichia coli KTE203]
gi|432977242|ref|ZP_20166067.1| cysteinyl-tRNA synthetase [Escherichia coli KTE209]
gi|432994316|ref|ZP_20182933.1| cysteinyl-tRNA synthetase [Escherichia coli KTE218]
gi|432998735|ref|ZP_20187275.1| cysteinyl-tRNA synthetase [Escherichia coli KTE223]
gi|433004052|ref|ZP_20192490.1| cysteinyl-tRNA synthetase [Escherichia coli KTE227]
gi|433011261|ref|ZP_20199666.1| cysteinyl-tRNA synthetase [Escherichia coli KTE229]
gi|433012696|ref|ZP_20201079.1| cysteinyl-tRNA synthetase [Escherichia coli KTE104]
gi|433022269|ref|ZP_20210295.1| cysteinyl-tRNA synthetase [Escherichia coli KTE106]
gi|433027568|ref|ZP_20215443.1| cysteinyl-tRNA synthetase [Escherichia coli KTE109]
gi|433031977|ref|ZP_20219787.1| cysteinyl-tRNA synthetase [Escherichia coli KTE112]
gi|433056859|ref|ZP_20243946.1| cysteinyl-tRNA synthetase [Escherichia coli KTE124]
gi|433061748|ref|ZP_20248711.1| cysteinyl-tRNA synthetase [Escherichia coli KTE125]
gi|433071574|ref|ZP_20258276.1| cysteinyl-tRNA synthetase [Escherichia coli KTE129]
gi|433076721|ref|ZP_20263287.1| cysteinyl-tRNA synthetase [Escherichia coli KTE131]
gi|433086124|ref|ZP_20272528.1| cysteinyl-tRNA synthetase [Escherichia coli KTE137]
gi|433090850|ref|ZP_20277156.1| cysteinyl-tRNA synthetase [Escherichia coli KTE138]
gi|433114472|ref|ZP_20300288.1| cysteinyl-tRNA synthetase [Escherichia coli KTE153]
gi|433119073|ref|ZP_20304787.1| cysteinyl-tRNA synthetase [Escherichia coli KTE157]
gi|433124089|ref|ZP_20309680.1| cysteinyl-tRNA synthetase [Escherichia coli KTE160]
gi|433128846|ref|ZP_20314326.1| cysteinyl-tRNA synthetase [Escherichia coli KTE163]
gi|433133666|ref|ZP_20319049.1| cysteinyl-tRNA synthetase [Escherichia coli KTE166]
gi|433138150|ref|ZP_20323437.1| cysteinyl-tRNA synthetase [Escherichia coli KTE167]
gi|433147978|ref|ZP_20333044.1| cysteinyl-tRNA synthetase [Escherichia coli KTE174]
gi|433152670|ref|ZP_20337640.1| cysteinyl-tRNA synthetase [Escherichia coli KTE176]
gi|433162341|ref|ZP_20347106.1| cysteinyl-tRNA synthetase [Escherichia coli KTE179]
gi|433167315|ref|ZP_20351991.1| cysteinyl-tRNA synthetase [Escherichia coli KTE180]
gi|433172388|ref|ZP_20356948.1| cysteinyl-tRNA synthetase [Escherichia coli KTE232]
gi|433182058|ref|ZP_20366361.1| cysteinyl-tRNA synthetase [Escherichia coli KTE85]
gi|433192455|ref|ZP_20376476.1| cysteinyl-tRNA synthetase [Escherichia coli KTE90]
gi|433197152|ref|ZP_20381078.1| cysteinyl-tRNA synthetase [Escherichia coli KTE94]
gi|433201948|ref|ZP_20385759.1| cysteinyl-tRNA synthetase [Escherichia coli KTE95]
gi|433206671|ref|ZP_20390372.1| cysteinyl-tRNA synthetase [Escherichia coli KTE97]
gi|433211450|ref|ZP_20395065.1| cysteinyl-tRNA synthetase [Escherichia coli KTE99]
gi|433326928|ref|ZP_20403589.1| cysteinyl-tRNA synthetase [Escherichia coli J96]
gi|442597621|ref|ZP_21015406.1| Cysteinyl-tRNA synthetase [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|443616547|ref|YP_007380403.1| cysteinyl-tRNA synthetase [Escherichia coli APEC O78]
gi|450185938|ref|ZP_21889301.1| cysteinyl-tRNA synthetase [Escherichia coli SEPT362]
gi|450211309|ref|ZP_21894283.1| cysteinyl-tRNA synthetase [Escherichia coli O08]
gi|29336539|sp|Q8FK44.1|SYC_ECOL6 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|123266145|sp|Q1RF08.1|SYC_ECOUT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187629813|sp|A7ZIT5.1|SYC_ECO24 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187629814|sp|A7ZXI1.1|SYC_ECOHS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187629815|sp|A1A8J2.1|SYC_ECOK1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187631652|sp|Q0T776.2|SYC_SHIF8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|189082063|sp|B1IZ75.1|SYC_ECOLC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226710841|sp|B6I0H1.1|SYC_ECOSE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735055|sp|B7ME49.1|SYC_ECO45 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735056|sp|B7NL20.1|SYC_ECO7I RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735057|sp|B7M4M9.1|SYC_ECO8A RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254781679|sp|B7L7F3.1|SYC_ECO55 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254781680|sp|B7MRI9.1|SYC_ECO81 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|26106935|gb|AAN79119.1|AE016757_23 Cysteinyl-tRNA synthetase [Escherichia coli CFT073]
gi|91071175|gb|ABE06056.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Escherichia coli
UTI89]
gi|115511907|gb|ABI99981.1| cysteinyl-tRNA synthetase [Escherichia coli APEC O1]
gi|157065730|gb|ABV04985.1| cysteinyl tRNA synthetase [Escherichia coli HS]
gi|157077784|gb|ABV17492.1| cysteinyl-tRNA synthetase [Escherichia coli E24377A]
gi|169756021|gb|ACA78720.1| cysteinyl-tRNA synthetase [Escherichia coli ATCC 8739]
gi|190907370|gb|EDV66967.1| cysteinyl tRNA synthetase [Escherichia coli F11]
gi|192929199|gb|EDV82809.1| cysteinyl tRNA synthetase [Escherichia coli E22]
gi|192958997|gb|EDV89433.1| cysteinyl tRNA synthetase [Escherichia coli E110019]
gi|194412371|gb|EDX28673.1| cysteinyl tRNA synthetase [Escherichia coli B171]
gi|194423621|gb|EDX39611.1| cysteinyl tRNA synthetase [Escherichia coli 101-1]
gi|209911001|dbj|BAG76075.1| cysteinyl-tRNA synthase [Escherichia coli SE11]
gi|218350721|emb|CAU96413.1| cysteinyl-tRNA synthetase [Escherichia coli 55989]
gi|218359858|emb|CAQ97400.1| cysteinyl-tRNA synthetase [Escherichia coli IAI1]
gi|218364206|emb|CAR01871.1| cysteinyl-tRNA synthetase [Escherichia coli S88]
gi|218368879|emb|CAR16629.1| cysteinyl-tRNA synthetase [Escherichia coli IAI39]
gi|218425949|emb|CAR06755.1| cysteinyl-tRNA synthetase [Escherichia coli ED1a]
gi|226898683|gb|EEH84942.1| cysteinyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
gi|227838551|gb|EEJ49017.1| cysteinyl-tRNA synthetase [Escherichia coli 83972]
gi|242376305|emb|CAQ30998.1| cysteinyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|253325530|gb|ACT30132.1| cysteinyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253972495|gb|ACT38166.1| cysteinyl-tRNA synthetase [Escherichia coli B str. REL606]
gi|253976705|gb|ACT42375.1| cysteinyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|257757868|dbj|BAI29365.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
gi|284920336|emb|CBG33396.1| cysteinyl-tRNA synthetase [Escherichia coli 042]
gi|291325121|gb|EFE64536.1| cysteinyl-tRNA synthetase [Escherichia coli B088]
gi|291433840|gb|EFF06813.1| cysteinyl-tRNA synthetase [Escherichia coli B185]
gi|291471854|gb|EFF14337.1| cysteinyl-tRNA synthetase [Escherichia coli B354]
gi|294494083|gb|ADE92839.1| cysteinyl-tRNA synthetase [Escherichia coli IHE3034]
gi|300298494|gb|EFJ54879.1| cysteinyl-tRNA synthetase [Escherichia coli MS 185-1]
gi|300404775|gb|EFJ88313.1| cysteinyl-tRNA synthetase [Escherichia coli MS 84-1]
gi|300407683|gb|EFJ91221.1| cysteinyl-tRNA synthetase [Escherichia coli MS 45-1]
gi|300413722|gb|EFJ97032.1| cysteinyl-tRNA synthetase [Escherichia coli MS 115-1]
gi|300418111|gb|EFK01422.1| cysteinyl-tRNA synthetase [Escherichia coli MS 182-1]
gi|300454692|gb|EFK18185.1| cysteinyl-tRNA synthetase [Escherichia coli MS 21-1]
gi|300462904|gb|EFK26397.1| cysteinyl-tRNA synthetase [Escherichia coli MS 187-1]
gi|300527013|gb|EFK48082.1| cysteinyl-tRNA synthetase [Escherichia coli MS 119-7]
gi|300527878|gb|EFK48940.1| cysteinyl-tRNA synthetase [Escherichia coli MS 107-1]
gi|300843179|gb|EFK70939.1| cysteinyl-tRNA synthetase [Escherichia coli MS 124-1]
gi|300845630|gb|EFK73390.1| cysteinyl-tRNA synthetase [Escherichia coli MS 78-1]
gi|306905876|gb|EFN36399.1| cysteinyl-tRNA synthetase [Escherichia coli W]
gi|307552429|gb|ADN45204.1| cysteinyl-tRNA synthetase [Escherichia coli ABU 83972]
gi|307628004|gb|ADN72308.1| cysteinyl-tRNA synthetase [Escherichia coli UM146]
gi|309700788|emb|CBJ00084.1| cysteinyl-tRNA synthetase [Escherichia coli ETEC H10407]
gi|310337270|gb|EFQ02408.1| cysteinyl-tRNA synthetase [Escherichia coli 1827-70]
gi|315059799|gb|ADT74126.1| cysteinyl-tRNA synthetase [Escherichia coli W]
gi|315256355|gb|EFU36323.1| cysteinyl-tRNA synthetase [Escherichia coli MS 85-1]
gi|315289989|gb|EFU49378.1| cysteinyl-tRNA synthetase [Escherichia coli MS 110-3]
gi|315294314|gb|EFU53665.1| cysteinyl-tRNA synthetase [Escherichia coli MS 153-1]
gi|315299089|gb|EFU58343.1| cysteinyl-tRNA synthetase [Escherichia coli MS 16-3]
gi|320180178|gb|EFW55115.1| Cysteinyl-tRNA synthetase [Shigella boydii ATCC 9905]
gi|320201474|gb|EFW76054.1| Cysteinyl-tRNA synthetase [Escherichia coli EC4100B]
gi|323160878|gb|EFZ46803.1| cysteinyl-tRNA synthetase [Escherichia coli E128010]
gi|323170660|gb|EFZ56310.1| cysteinyl-tRNA synthetase [Escherichia coli LT-68]
gi|323184846|gb|EFZ70216.1| cysteinyl-tRNA synthetase [Escherichia coli OK1357]
gi|323379632|gb|ADX51900.1| cysteinyl-tRNA synthetase [Escherichia coli KO11FL]
gi|323945190|gb|EGB41250.1| cysteinyl-tRNA synthetase [Escherichia coli H120]
gi|323952862|gb|EGB48730.1| cysteinyl-tRNA synthetase [Escherichia coli H252]
gi|323958529|gb|EGB54234.1| cysteinyl-tRNA synthetase [Escherichia coli H263]
gi|323965083|gb|EGB60543.1| cysteinyl-tRNA synthetase [Escherichia coli M863]
gi|323975981|gb|EGB71074.1| cysteinyl-tRNA synthetase [Escherichia coli TW10509]
gi|324006401|gb|EGB75620.1| cysteinyl-tRNA synthetase [Escherichia coli MS 57-2]
gi|324010562|gb|EGB79781.1| cysteinyl-tRNA synthetase [Escherichia coli MS 60-1]
gi|324019545|gb|EGB88764.1| cysteinyl-tRNA synthetase [Escherichia coli MS 117-3]
gi|324116764|gb|EGC10678.1| cysteinyl-tRNA synthetase [Escherichia coli E1167]
gi|327254874|gb|EGE66490.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_7v]
gi|331050759|gb|EGI22816.1| cysteine--tRNA ligase [Escherichia coli M718]
gi|331054831|gb|EGI26840.1| cysteine--tRNA ligase [Escherichia coli TA206]
gi|331060336|gb|EGI32300.1| cysteine--tRNA ligase [Escherichia coli TA143]
gi|331066105|gb|EGI37989.1| cysteine--tRNA ligase [Escherichia coli TA271]
gi|331071046|gb|EGI42405.1| cysteine--tRNA ligase [Escherichia coli TA280]
gi|331076253|gb|EGI47535.1| cysteine--tRNA ligase [Escherichia coli H591]
gi|331081122|gb|EGI52287.1| cysteine--tRNA ligase [Escherichia coli H299]
gi|332104030|gb|EGJ07376.1| cysteinyl-tRNA synthetase [Shigella sp. D9]
gi|332341889|gb|AEE55223.1| cysteinyl-tRNA synthetase CysS [Escherichia coli UMNK88]
gi|332760809|gb|EGJ91097.1| cysteinyl-tRNA synthetase [Shigella flexneri 4343-70]
gi|333007742|gb|EGK27218.1| cysteinyl-tRNA synthetase [Shigella flexneri K-218]
gi|333008207|gb|EGK27682.1| cysteinyl-tRNA synthetase [Shigella flexneri VA-6]
gi|333009963|gb|EGK29398.1| cysteinyl-tRNA synthetase [Shigella flexneri K-272]
gi|333020797|gb|EGK40057.1| cysteinyl-tRNA synthetase [Shigella flexneri K-227]
gi|335577090|gb|EGM63323.1| cysteinyl-tRNA synthetase [Shigella flexneri J1713]
gi|338771329|gb|EGP26071.1| Cysteinyl-tRNA synthetase [Escherichia coli PCN033]
gi|340735785|gb|EGR64841.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 01-09591]
gi|340741591|gb|EGR75737.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. LB226692]
gi|341917063|gb|EGT66679.1| hypothetical protein C22711_0707 [Escherichia coli O104:H4 str.
C227-11]
gi|342928251|gb|EGU96973.1| cysteine--tRNA ligase [Escherichia coli MS 79-10]
gi|345343749|gb|EGW76129.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_B2F1]
gi|345354159|gb|EGW86386.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_94C]
gi|345361066|gb|EGW93228.1| cysteinyl-tRNA synthetase [Escherichia coli 3030-1]
gi|345365010|gb|EGW97123.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_DG131-3]
gi|345386371|gb|EGX16206.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_H.1.8]
gi|345395395|gb|EGX25141.1| cysteinyl-tRNA synthetase [Escherichia coli TX1999]
gi|349736637|gb|AEQ11343.1| cysteinyl-tRNA synthetase [Escherichia coli O7:K1 str. CE10]
gi|354858352|gb|EHF18803.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 04-8351]
gi|354860225|gb|EHF20672.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. C227-11]
gi|354866921|gb|EHF27344.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. C236-11]
gi|354877257|gb|EHF37617.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 09-7901]
gi|354879564|gb|EHF39902.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4404]
gi|354883648|gb|EHF43964.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-3677]
gi|354885952|gb|EHF46244.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4522]
gi|354889019|gb|EHF49273.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4623]
gi|354901620|gb|EHF61747.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C1]
gi|354905851|gb|EHF65934.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C2]
gi|354908358|gb|EHF68414.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C3]
gi|354918830|gb|EHF78786.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C5]
gi|354922518|gb|EHF82433.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C4]
gi|355419010|gb|AER83207.1| cysteinyl-tRNA synthetase [Escherichia coli str. 'clone D i2']
gi|355423930|gb|AER88126.1| cysteinyl-tRNA synthetase [Escherichia coli str. 'clone D i14']
gi|371592474|gb|EHN81375.1| cysteinyl-tRNA synthetase [Escherichia coli TA124]
gi|371593900|gb|EHN82774.1| cysteinyl-tRNA synthetase [Escherichia coli H494]
gi|371603560|gb|EHN92213.1| cysteinyl-tRNA synthetase [Escherichia coli B093]
gi|371611520|gb|EHO00043.1| cysteinyl-tRNA synthetase [Escherichia coli H397]
gi|375319713|gb|EHS65802.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H43 str. T22]
gi|377879269|gb|EHU43842.1| cysteinyl-tRNA synthetase [Escherichia coli DEC2B]
gi|378018924|gb|EHV81770.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7A]
gi|378027972|gb|EHV90597.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7C]
gi|378032490|gb|EHV95071.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7D]
gi|378042422|gb|EHW04871.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7E]
gi|378133979|gb|EHW95310.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10E]
gi|378136188|gb|EHW97485.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11A]
gi|378147439|gb|EHX08587.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11B]
gi|378153181|gb|EHX14267.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11D]
gi|378156541|gb|EHX17588.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11C]
gi|378161309|gb|EHX22292.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11E]
gi|378174552|gb|EHX35376.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12B]
gi|378175188|gb|EHX36007.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12A]
gi|378177188|gb|EHX37989.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12C]
gi|378190671|gb|EHX51255.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13A]
gi|378190795|gb|EHX51374.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12D]
gi|378193682|gb|EHX54211.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12E]
gi|378204267|gb|EHX64683.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13B]
gi|378208416|gb|EHX68800.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13D]
gi|378208669|gb|EHX69049.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13C]
gi|378219873|gb|EHX80140.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13E]
gi|378222018|gb|EHX82260.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14A]
gi|378226412|gb|EHX86599.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14B]
gi|378234094|gb|EHX94176.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14C]
gi|378236993|gb|EHX97026.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14D]
gi|380349455|gb|EIA37727.1| cysteinyl-tRNA synthetase [Escherichia coli SCI-07]
gi|383394197|gb|AFH19155.1| cysteinyl-tRNA synthetase [Escherichia coli KO11FL]
gi|383404018|gb|AFH10261.1| cysteinyl-tRNA synthetase [Escherichia coli W]
gi|383466054|gb|EID61075.1| cysteinyl-tRNA synthetase [Shigella flexneri 5a str. M90T]
gi|383474475|gb|EID66463.1| cysteinyl-tRNA synthetase [Escherichia coli W26]
gi|384472678|gb|EIE56730.1| cysteinyl-tRNA synthetase [Escherichia coli AI27]
gi|385704938|gb|EIG42010.1| cysteinyl-tRNA synthetase [Escherichia coli B799]
gi|386138267|gb|EIG79427.1| cysteine--tRNA ligase [Escherichia coli 1.2741]
gi|386148773|gb|EIG95208.1| cysteine--tRNA ligase [Escherichia coli 97.0246]
gi|386150253|gb|EIH01542.1| cysteine--tRNA ligase [Escherichia coli 5.0588]
gi|386157330|gb|EIH13672.1| cysteine--tRNA ligase [Escherichia coli 97.0259]
gi|386164115|gb|EIH25901.1| cysteine--tRNA ligase [Escherichia coli 1.2264]
gi|386169703|gb|EIH36211.1| cysteine--tRNA ligase [Escherichia coli 96.0497]
gi|386173114|gb|EIH45127.1| cysteine--tRNA ligase [Escherichia coli 99.0741]
gi|386177522|gb|EIH55001.1| cysteine--tRNA ligase [Escherichia coli 3.2608]
gi|386186462|gb|EIH69178.1| cysteine--tRNA ligase [Escherichia coli 93.0624]
gi|386200354|gb|EIH99345.1| cysteine--tRNA ligase [Escherichia coli 96.154]
gi|386206344|gb|EII10850.1| cysteine--tRNA ligase [Escherichia coli 5.0959]
gi|386209542|gb|EII20029.1| cysteine--tRNA ligase [Escherichia coli 9.0111]
gi|386230047|gb|EII57402.1| cysteine--tRNA ligase [Escherichia coli 3.3884]
gi|386247061|gb|EII93234.1| cysteine--tRNA ligase [Escherichia coli TW07793]
gi|388336699|gb|EIL03232.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H2 str. CVM9450]
gi|388336807|gb|EIL03332.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H25 str. CVM9340]
gi|388384180|gb|EIL45922.1| cysteinyl-tRNA synthetase [Escherichia coli KD1]
gi|388390266|gb|EIL51760.1| cysteinyl-tRNA synthetase [Escherichia coli 541-15]
gi|388404599|gb|EIL65053.1| cysteinyl-tRNA synthetase [Escherichia coli 541-1]
gi|388415693|gb|EIL75614.1| cysteinyl-tRNA synthetase [Escherichia coli HM605]
gi|388420608|gb|EIL80295.1| cysteinyl-tRNA synthetase [Escherichia coli CUMT8]
gi|391254410|gb|EIQ13572.1| cysteinyl-tRNA synthetase [Shigella flexneri 2850-71]
gi|391259245|gb|EIQ18320.1| cysteinyl-tRNA synthetase [Shigella flexneri K-1770]
gi|391309675|gb|EIQ67343.1| cysteinyl-tRNA synthetase [Escherichia coli EPECa12]
gi|391314928|gb|EIQ72466.1| cysteinyl-tRNA synthetase [Escherichia coli EPEC C342-62]
gi|397787008|gb|EJK97839.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_O31]
gi|397901123|gb|EJL17474.1| cysteinyl-tRNA synthetase [Shigella flexneri 6603-63]
gi|404292676|gb|EJZ49476.1| cysteinyl-tRNA synthetase [Escherichia sp. 1_1_43]
gi|406779010|gb|AFS58434.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407055593|gb|AFS75644.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
2011C-3493]
gi|407064008|gb|AFS85055.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408218814|gb|EKI43002.1| cysteine--tRNA ligase [Escherichia coli 3006]
gi|408221724|gb|EKI45657.1| cysteine--tRNA ligase [Escherichia coli 07798]
gi|408231841|gb|EKI55102.1| cysteine--tRNA ligase [Escherichia coli N1]
gi|408347739|gb|EKJ61900.1| cysteine--tRNA ligase [Escherichia coli 0.1288]
gi|408457053|gb|EKJ80855.1| cysteinyl-tRNA synthetase [Escherichia coli AD30]
gi|412961767|emb|CCK45676.1| cysteine tRNA synthetase [Escherichia coli chi7122]
gi|412968381|emb|CCJ43001.1| cysteine tRNA synthetase [Escherichia coli]
gi|429351632|gb|EKY88352.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02030]
gi|429352335|gb|EKY89051.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429353093|gb|EKY89802.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02092]
gi|429367006|gb|EKZ03607.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02093]
gi|429367917|gb|EKZ04509.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02281]
gi|429370412|gb|EKZ06978.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02318]
gi|429382799|gb|EKZ19263.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02913]
gi|429385032|gb|EKZ21486.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03943]
gi|429385555|gb|EKZ22008.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03439]
gi|429397248|gb|EKZ33595.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-04080]
gi|429398865|gb|EKZ35192.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429399055|gb|EKZ35379.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429410538|gb|EKZ46760.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429412438|gb|EKZ48635.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429419423|gb|EKZ55561.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429427982|gb|EKZ64062.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429434826|gb|EKZ70850.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429435650|gb|EKZ71668.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429440191|gb|EKZ76170.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429444791|gb|EKZ80736.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429451096|gb|EKZ86988.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0466]
gi|429456588|gb|EKZ92433.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9941]
gi|430879681|gb|ELC03012.1| cysteinyl-tRNA synthetase [Escherichia coli KTE4]
gi|430888964|gb|ELC11635.1| cysteinyl-tRNA synthetase [Escherichia coli KTE10]
gi|430891512|gb|ELC14048.1| cysteinyl-tRNA synthetase [Escherichia coli KTE5]
gi|430901505|gb|ELC23473.1| cysteinyl-tRNA synthetase [Escherichia coli KTE12]
gi|430938525|gb|ELC58766.1| cysteinyl-tRNA synthetase [Escherichia coli KTE39]
gi|430956259|gb|ELC74935.1| cysteinyl-tRNA synthetase [Escherichia coli KTE187]
gi|430966744|gb|ELC84107.1| cysteinyl-tRNA synthetase [Escherichia coli KTE188]
gi|430969645|gb|ELC86749.1| cysteinyl-tRNA synthetase [Escherichia coli KTE189]
gi|430974742|gb|ELC91658.1| cysteinyl-tRNA synthetase [Escherichia coli KTE193]
gi|430976334|gb|ELC93209.1| cysteinyl-tRNA synthetase [Escherichia coli KTE191]
gi|430985321|gb|ELD01927.1| cysteinyl-tRNA synthetase [Escherichia coli KTE201]
gi|430997288|gb|ELD13555.1| cysteinyl-tRNA synthetase [Escherichia coli KTE205]
gi|431000023|gb|ELD16097.1| cysteinyl-tRNA synthetase [Escherichia coli KTE206]
gi|431010896|gb|ELD25240.1| cysteinyl-tRNA synthetase [Escherichia coli KTE210]
gi|431013004|gb|ELD26752.1| cysteinyl-tRNA synthetase [Escherichia coli KTE213]
gi|431018648|gb|ELD32079.1| cysteinyl-tRNA synthetase [Escherichia coli KTE212]
gi|431027905|gb|ELD40950.1| cysteinyl-tRNA synthetase [Escherichia coli KTE214]
gi|431042231|gb|ELD52723.1| cysteinyl-tRNA synthetase [Escherichia coli KTE220]
gi|431054793|gb|ELD64362.1| cysteinyl-tRNA synthetase [Escherichia coli KTE230]
gi|431056970|gb|ELD66448.1| cysteinyl-tRNA synthetase [Escherichia coli KTE233]
gi|431063899|gb|ELD73113.1| cysteinyl-tRNA synthetase [Escherichia coli KTE234]
gi|431078419|gb|ELD85477.1| cysteinyl-tRNA synthetase [Escherichia coli KTE236]
gi|431085419|gb|ELD91532.1| cysteinyl-tRNA synthetase [Escherichia coli KTE237]
gi|431086820|gb|ELD92836.1| cysteinyl-tRNA synthetase [Escherichia coli KTE47]
gi|431103192|gb|ELE07862.1| cysteinyl-tRNA synthetase [Escherichia coli KTE53]
gi|431108902|gb|ELE12873.1| cysteinyl-tRNA synthetase [Escherichia coli KTE56]
gi|431110859|gb|ELE14776.1| cysteinyl-tRNA synthetase [Escherichia coli KTE55]
gi|431119651|gb|ELE22650.1| cysteinyl-tRNA synthetase [Escherichia coli KTE57]
gi|431124105|gb|ELE26759.1| cysteinyl-tRNA synthetase [Escherichia coli KTE58]
gi|431133083|gb|ELE35081.1| cysteinyl-tRNA synthetase [Escherichia coli KTE60]
gi|431134078|gb|ELE36044.1| cysteinyl-tRNA synthetase [Escherichia coli KTE62]
gi|431140627|gb|ELE42393.1| cysteinyl-tRNA synthetase [Escherichia coli KTE67]
gi|431143745|gb|ELE45461.1| cysteinyl-tRNA synthetase [Escherichia coli KTE66]
gi|431162988|gb|ELE63428.1| cysteinyl-tRNA synthetase [Escherichia coli KTE76]
gi|431193420|gb|ELE92756.1| cysteinyl-tRNA synthetase [Escherichia coli KTE87]
gi|431207283|gb|ELF05547.1| cysteinyl-tRNA synthetase [Escherichia coli KTE142]
gi|431213841|gb|ELF11697.1| cysteinyl-tRNA synthetase [Escherichia coli KTE119]
gi|431225147|gb|ELF22356.1| cysteinyl-tRNA synthetase [Escherichia coli KTE143]
gi|431259759|gb|ELF52122.1| cysteinyl-tRNA synthetase [Escherichia coli KTE8]
gi|431267141|gb|ELF58674.1| cysteinyl-tRNA synthetase [Escherichia coli KTE9]
gi|431278157|gb|ELF69151.1| cysteinyl-tRNA synthetase [Escherichia coli KTE45]
gi|431300719|gb|ELF90270.1| cysteinyl-tRNA synthetase [Escherichia coli KTE29]
gi|431305704|gb|ELF94025.1| cysteinyl-tRNA synthetase [Escherichia coli KTE22]
gi|431311537|gb|ELF99695.1| cysteinyl-tRNA synthetase [Escherichia coli KTE46]
gi|431313466|gb|ELG01439.1| cysteinyl-tRNA synthetase [Escherichia coli KTE48]
gi|431318910|gb|ELG06603.1| cysteinyl-tRNA synthetase [Escherichia coli KTE50]
gi|431320826|gb|ELG08456.1| cysteinyl-tRNA synthetase [Escherichia coli KTE54]
gi|431330952|gb|ELG18216.1| cysteinyl-tRNA synthetase [Escherichia coli KTE59]
gi|431332140|gb|ELG19383.1| cysteinyl-tRNA synthetase [Escherichia coli KTE63]
gi|431342105|gb|ELG29101.1| cysteinyl-tRNA synthetase [Escherichia coli KTE65]
gi|431351000|gb|ELG37798.1| cysteinyl-tRNA synthetase [Escherichia coli KTE84]
gi|431357523|gb|ELG44190.1| cysteinyl-tRNA synthetase [Escherichia coli KTE101]
gi|431357938|gb|ELG44604.1| cysteinyl-tRNA synthetase [Escherichia coli KTE91]
gi|431369041|gb|ELG55272.1| cysteinyl-tRNA synthetase [Escherichia coli KTE115]
gi|431370847|gb|ELG56640.1| cysteinyl-tRNA synthetase [Escherichia coli KTE118]
gi|431375358|gb|ELG60702.1| cysteinyl-tRNA synthetase [Escherichia coli KTE123]
gi|431380272|gb|ELG65172.1| cysteinyl-tRNA synthetase [Escherichia coli KTE135]
gi|431388736|gb|ELG72459.1| cysteinyl-tRNA synthetase [Escherichia coli KTE136]
gi|431391977|gb|ELG75581.1| cysteinyl-tRNA synthetase [Escherichia coli KTE140]
gi|431397336|gb|ELG80792.1| cysteinyl-tRNA synthetase [Escherichia coli KTE141]
gi|431401975|gb|ELG85296.1| cysteinyl-tRNA synthetase [Escherichia coli KTE144]
gi|431405292|gb|ELG88535.1| cysteinyl-tRNA synthetase [Escherichia coli KTE147]
gi|431407927|gb|ELG91124.1| cysteinyl-tRNA synthetase [Escherichia coli KTE146]
gi|431413639|gb|ELG96404.1| cysteinyl-tRNA synthetase [Escherichia coli KTE154]
gi|431429444|gb|ELH11372.1| cysteinyl-tRNA synthetase [Escherichia coli KTE192]
gi|431456894|gb|ELH37237.1| cysteinyl-tRNA synthetase [Escherichia coli KTE184]
gi|431474459|gb|ELH54276.1| cysteinyl-tRNA synthetase [Escherichia coli KTE203]
gi|431478482|gb|ELH58229.1| cysteinyl-tRNA synthetase [Escherichia coli KTE202]
gi|431482346|gb|ELH62049.1| cysteinyl-tRNA synthetase [Escherichia coli KTE209]
gi|431509650|gb|ELH87899.1| cysteinyl-tRNA synthetase [Escherichia coli KTE218]
gi|431514304|gb|ELH92146.1| cysteinyl-tRNA synthetase [Escherichia coli KTE223]
gi|431517373|gb|ELH94895.1| cysteinyl-tRNA synthetase [Escherichia coli KTE227]
gi|431519473|gb|ELH96925.1| cysteinyl-tRNA synthetase [Escherichia coli KTE229]
gi|431536031|gb|ELI12366.1| cysteinyl-tRNA synthetase [Escherichia coli KTE104]
gi|431541154|gb|ELI16604.1| cysteinyl-tRNA synthetase [Escherichia coli KTE106]
gi|431545638|gb|ELI20285.1| cysteinyl-tRNA synthetase [Escherichia coli KTE109]
gi|431559816|gb|ELI33353.1| cysteinyl-tRNA synthetase [Escherichia coli KTE112]
gi|431574302|gb|ELI47084.1| cysteinyl-tRNA synthetase [Escherichia coli KTE124]
gi|431587891|gb|ELI59241.1| cysteinyl-tRNA synthetase [Escherichia coli KTE125]
gi|431593761|gb|ELI64053.1| cysteinyl-tRNA synthetase [Escherichia coli KTE129]
gi|431601298|gb|ELI70815.1| cysteinyl-tRNA synthetase [Escherichia coli KTE131]
gi|431610286|gb|ELI79587.1| cysteinyl-tRNA synthetase [Escherichia coli KTE137]
gi|431614769|gb|ELI83904.1| cysteinyl-tRNA synthetase [Escherichia coli KTE138]
gi|431636972|gb|ELJ05091.1| cysteinyl-tRNA synthetase [Escherichia coli KTE153]
gi|431649422|gb|ELJ16780.1| cysteinyl-tRNA synthetase [Escherichia coli KTE157]
gi|431650192|gb|ELJ17529.1| cysteinyl-tRNA synthetase [Escherichia coli KTE160]
gi|431651716|gb|ELJ18955.1| cysteinyl-tRNA synthetase [Escherichia coli KTE163]
gi|431663481|gb|ELJ30243.1| cysteinyl-tRNA synthetase [Escherichia coli KTE166]
gi|431665119|gb|ELJ31846.1| cysteinyl-tRNA synthetase [Escherichia coli KTE167]
gi|431676871|gb|ELJ42954.1| cysteinyl-tRNA synthetase [Escherichia coli KTE174]
gi|431678726|gb|ELJ44722.1| cysteinyl-tRNA synthetase [Escherichia coli KTE176]
gi|431692379|gb|ELJ57817.1| cysteinyl-tRNA synthetase [Escherichia coli KTE179]
gi|431694270|gb|ELJ59655.1| cysteinyl-tRNA synthetase [Escherichia coli KTE180]
gi|431696333|gb|ELJ61520.1| cysteinyl-tRNA synthetase [Escherichia coli KTE232]
gi|431711954|gb|ELJ76261.1| cysteinyl-tRNA synthetase [Escherichia coli KTE85]
gi|431721168|gb|ELJ85164.1| cysteinyl-tRNA synthetase [Escherichia coli KTE90]
gi|431725339|gb|ELJ89193.1| cysteinyl-tRNA synthetase [Escherichia coli KTE94]
gi|431726189|gb|ELJ90006.1| cysteinyl-tRNA synthetase [Escherichia coli KTE95]
gi|431733227|gb|ELJ96668.1| cysteinyl-tRNA synthetase [Escherichia coli KTE97]
gi|431736105|gb|ELJ99447.1| cysteinyl-tRNA synthetase [Escherichia coli KTE99]
gi|432345151|gb|ELL39671.1| cysteinyl-tRNA synthetase [Escherichia coli J96]
gi|441653817|emb|CCQ01296.1| Cysteinyl-tRNA synthetase [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|443421055|gb|AGC85959.1| cysteinyl-tRNA synthetase [Escherichia coli APEC O78]
gi|449322524|gb|EMD12513.1| cysteinyl-tRNA synthetase [Escherichia coli O08]
gi|449324848|gb|EMD14770.1| cysteinyl-tRNA synthetase [Escherichia coli SEPT362]
Length = 461
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|301020339|ref|ZP_07184446.1| cysteinyl-tRNA synthetase [Escherichia coli MS 69-1]
gi|419916744|ref|ZP_14435033.1| cysteinyl-tRNA synthetase [Escherichia coli KD2]
gi|300398784|gb|EFJ82322.1| cysteinyl-tRNA synthetase [Escherichia coli MS 69-1]
gi|388395398|gb|EIL56603.1| cysteinyl-tRNA synthetase [Escherichia coli KD2]
Length = 461
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMITEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|283784327|ref|YP_003364192.1| cysteinyl-tRNA synthetase [Citrobacter rodentium ICC168]
gi|282947781|emb|CBG87337.1| cysteinyl-tRNA synthetase [Citrobacter rodentium ICC168]
Length = 461
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 230/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P+YG+LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPSYGQLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKTVAPAGGEAFEARFIDAMNDDFN 351
>gi|301648555|ref|ZP_07248272.1| cysteinyl-tRNA synthetase [Escherichia coli MS 146-1]
gi|331641048|ref|ZP_08342183.1| cysteine--tRNA ligase [Escherichia coli H736]
gi|386279546|ref|ZP_10057227.1| cysteinyl-tRNA synthetase [Escherichia sp. 4_1_40B]
gi|386703743|ref|YP_006167590.1| cysteinyl-tRNA synthetase [Escherichia coli P12b]
gi|415777054|ref|ZP_11488306.1| cysteinyl-tRNA synthetase [Escherichia coli 3431]
gi|417260547|ref|ZP_12048045.1| cysteine--tRNA ligase [Escherichia coli 2.3916]
gi|417270680|ref|ZP_12058033.1| cysteine--tRNA ligase [Escherichia coli 2.4168]
gi|417275430|ref|ZP_12062767.1| cysteine--tRNA ligase [Escherichia coli 3.2303]
gi|417633016|ref|ZP_12283236.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_S1191]
gi|418301374|ref|ZP_12913168.1| cysteinyl-tRNA synthetase [Escherichia coli UMNF18]
gi|419141063|ref|ZP_13685819.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6A]
gi|419146464|ref|ZP_13691160.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6B]
gi|419152376|ref|ZP_13696963.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6C]
gi|419157860|ref|ZP_13702384.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6D]
gi|419162789|ref|ZP_13707268.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6E]
gi|419812720|ref|ZP_14337583.1| cysteinyl-tRNA synthetase [Escherichia coli O32:H37 str. P4]
gi|422791338|ref|ZP_16844041.1| cysteinyl-tRNA synthetase [Escherichia coli TA007]
gi|422816537|ref|ZP_16864752.1| cysteinyl-tRNA synthetase [Escherichia coli M919]
gi|425113893|ref|ZP_18515724.1| cysteine--tRNA ligase [Escherichia coli 8.0566]
gi|425118657|ref|ZP_18520387.1| cysteine--tRNA ligase [Escherichia coli 8.0569]
gi|425271229|ref|ZP_18662737.1| cysteine--tRNA ligase [Escherichia coli TW15901]
gi|425281903|ref|ZP_18673019.1| cysteine--tRNA ligase [Escherichia coli TW00353]
gi|432415475|ref|ZP_19658106.1| cysteinyl-tRNA synthetase [Escherichia coli KTE44]
gi|432626107|ref|ZP_19862092.1| cysteinyl-tRNA synthetase [Escherichia coli KTE77]
gi|432635837|ref|ZP_19871723.1| cysteinyl-tRNA synthetase [Escherichia coli KTE81]
gi|432659767|ref|ZP_19895427.1| cysteinyl-tRNA synthetase [Escherichia coli KTE111]
gi|432684365|ref|ZP_19919683.1| cysteinyl-tRNA synthetase [Escherichia coli KTE156]
gi|432690413|ref|ZP_19925659.1| cysteinyl-tRNA synthetase [Escherichia coli KTE161]
gi|432703095|ref|ZP_19938221.1| cysteinyl-tRNA synthetase [Escherichia coli KTE171]
gi|432953686|ref|ZP_20145956.1| cysteinyl-tRNA synthetase [Escherichia coli KTE197]
gi|301073390|gb|EFK88196.1| cysteinyl-tRNA synthetase [Escherichia coli MS 146-1]
gi|315616534|gb|EFU97151.1| cysteinyl-tRNA synthetase [Escherichia coli 3431]
gi|323972179|gb|EGB67391.1| cysteinyl-tRNA synthetase [Escherichia coli TA007]
gi|331037846|gb|EGI10066.1| cysteine--tRNA ligase [Escherichia coli H736]
gi|339413472|gb|AEJ55144.1| cysteinyl-tRNA synthetase [Escherichia coli UMNF18]
gi|345390686|gb|EGX20483.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_S1191]
gi|377999531|gb|EHV62610.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6A]
gi|378001392|gb|EHV64451.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6B]
gi|378003357|gb|EHV66400.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6C]
gi|378013846|gb|EHV76761.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6D]
gi|378016379|gb|EHV79260.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6E]
gi|383101911|gb|AFG39420.1| Cysteinyl-tRNA synthetase [Escherichia coli P12b]
gi|385154446|gb|EIF16459.1| cysteinyl-tRNA synthetase [Escherichia coli O32:H37 str. P4]
gi|385540010|gb|EIF86837.1| cysteinyl-tRNA synthetase [Escherichia coli M919]
gi|386123545|gb|EIG72141.1| cysteinyl-tRNA synthetase [Escherichia sp. 4_1_40B]
gi|386225705|gb|EII48030.1| cysteine--tRNA ligase [Escherichia coli 2.3916]
gi|386237023|gb|EII68995.1| cysteine--tRNA ligase [Escherichia coli 2.4168]
gi|386242083|gb|EII78996.1| cysteine--tRNA ligase [Escherichia coli 3.2303]
gi|408198513|gb|EKI23739.1| cysteine--tRNA ligase [Escherichia coli TW15901]
gi|408205859|gb|EKI30689.1| cysteine--tRNA ligase [Escherichia coli TW00353]
gi|408572824|gb|EKK48706.1| cysteine--tRNA ligase [Escherichia coli 8.0566]
gi|408573418|gb|EKK49269.1| cysteine--tRNA ligase [Escherichia coli 8.0569]
gi|430943851|gb|ELC63957.1| cysteinyl-tRNA synthetase [Escherichia coli KTE44]
gi|431165242|gb|ELE65600.1| cysteinyl-tRNA synthetase [Escherichia coli KTE77]
gi|431174119|gb|ELE74180.1| cysteinyl-tRNA synthetase [Escherichia coli KTE81]
gi|431203377|gb|ELF02035.1| cysteinyl-tRNA synthetase [Escherichia coli KTE111]
gi|431224783|gb|ELF21993.1| cysteinyl-tRNA synthetase [Escherichia coli KTE156]
gi|431230901|gb|ELF26671.1| cysteinyl-tRNA synthetase [Escherichia coli KTE161]
gi|431247226|gb|ELF41468.1| cysteinyl-tRNA synthetase [Escherichia coli KTE171]
gi|431470182|gb|ELH50105.1| cysteinyl-tRNA synthetase [Escherichia coli KTE197]
Length = 461
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|238790851|ref|ZP_04634606.1| Cysteinyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
gi|238721068|gb|EEQ12753.1| Cysteinyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
Length = 473
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 196/427 (45%), Positives = 253/427 (59%), Gaps = 29/427 (6%)
Query: 13 PKMDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLE 72
P+ LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL
Sbjct: 8 PRNVPMLKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLR 67
Query: 73 HLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVS 132
+L +TYVRN TDVDDKII+RA + E L++R E D L P +PR +
Sbjct: 68 YLGYSLTYVRNVTDVDDKIIKRAIENNETCEQLTSRMLAEMHKDFDALNLERPDLEPRAT 127
Query: 133 DHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRK 191
H+ +I ++ ++I D AYV GDV FAV+ P+YG LS Q L+ +AG RV V K
Sbjct: 128 HHIPEIIELTERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVADVK 187
Query: 192 RNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHH 251
RNP DF LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHH
Sbjct: 188 RNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHH 247
Query: 252 ENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLIS 311
ENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S
Sbjct: 248 ENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMS 307
Query: 312 AHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD 371
HYRS LNYS L A ++ +Y L+ G A PA +
Sbjct: 308 GHYRSQLNYSEENLKQARASLERLYTALR------------GTDANATPAGG---AEFEA 352
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F A M DD NT + F I +N LK + I + + E++++
Sbjct: 353 RFRAAMDDDFNTPEAYSVLFD-----IAREVNRLKTED--------IAAANGLAAELRKL 399
Query: 432 LRILGLL 438
+LGLL
Sbjct: 400 AHVLGLL 406
>gi|329999154|ref|ZP_08303351.1| cysteine--tRNA ligase, partial [Klebsiella sp. MS 92-3]
gi|328538407|gb|EGF64532.1| cysteine--tRNA ligase [Klebsiella sp. MS 92-3]
Length = 444
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++ AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSVDAAGGEAFEARFIEAMDDDFN 351
>gi|194432744|ref|ZP_03065029.1| cysteinyl tRNA synthetase [Shigella dysenteriae 1012]
gi|194419006|gb|EDX35090.1| cysteinyl tRNA synthetase [Shigella dysenteriae 1012]
Length = 461
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHITEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|423127880|ref|ZP_17115559.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5250]
gi|376394919|gb|EHT07569.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5250]
Length = 461
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 228/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG+LS Q L+ +AG RV V K NP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKHNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKFYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + P AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKTAEPSGGEAFEARFIEAMDDDFN 351
>gi|419389943|ref|ZP_13930782.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15A]
gi|419395117|ref|ZP_13935901.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15B]
gi|419400465|ref|ZP_13941199.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15C]
gi|419405639|ref|ZP_13946342.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15D]
gi|419411130|ref|ZP_13951803.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15E]
gi|422330798|ref|ZP_16411815.1| cysteinyl-tRNA synthetase [Escherichia coli 4_1_47FAA]
gi|373248291|gb|EHP67722.1| cysteinyl-tRNA synthetase [Escherichia coli 4_1_47FAA]
gi|378244745|gb|EHY04687.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15A]
gi|378251328|gb|EHY11228.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15B]
gi|378252296|gb|EHY12190.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15C]
gi|378257368|gb|EHY17207.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15D]
gi|378261321|gb|EHY21116.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15E]
Length = 461
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|381401996|ref|ZP_09926885.1| cysteinyl-tRNA synthetase [Kingella kingae PYKK081]
gi|380833122|gb|EIC13001.1| cysteinyl-tRNA synthetase [Kingella kingae PYKK081]
Length = 469
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 184/387 (47%), Positives = 239/387 (61%), Gaps = 26/387 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++T+QKE F P+ V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 2 LQIYNTLTRQKEKFEPLDPKNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGYPL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RAN+ G L+ + D L L P +P+ ++H+ Q+
Sbjct: 62 TYVRNITDIDDKIIKRANERGITIQELTEEFITAMNEDSDKLGVLRPDVEPKATEHIPQM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD+ KR+P DF
Sbjct: 122 IQMIEDLIANGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVDVDTNKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EP W+SPWG GRPGWHIECSAM FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPEEPHWNSPWGKGRPGWHIECSAMGGELFGQTFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAA----CQ--------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 305
SC A C S+V YW+HNG + +NEKMSKSLGNFFTIR + ++Y P +
Sbjct: 242 SCGAHNSSCNHNHGDKIIQSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVLKKYQPEVV 301
Query: 306 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 365
R F++ AHYRSPLNYS LD A +++ +Y TL + A E+
Sbjct: 302 RFFILRAHYRSPLNYSDAHLDDAKNSLARLYNTLNNVAPAAFELTEN------------- 348
Query: 366 INKLRDEFHARMSDDLNTSHILTGAFQ 392
N+ +F A M+DD T+ ++ F+
Sbjct: 349 TNEYTRKFFAAMNDDFGTAEAMSVLFE 375
>gi|333376196|ref|ZP_08467988.1| cysteine--tRNA ligase [Kingella kingae ATCC 23330]
gi|332968931|gb|EGK07978.1| cysteine--tRNA ligase [Kingella kingae ATCC 23330]
Length = 469
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 184/387 (47%), Positives = 239/387 (61%), Gaps = 26/387 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++T+QKE F P+ V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 2 LQIYNTLTRQKEKFEPLDPKNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGYPL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RAN+ G L+ + D L L P +P+ ++H+ Q+
Sbjct: 62 TYVRNITDIDDKIIKRANERGITIQELTEEFITAMNEDSDKLGVLRPDVEPKATEHIPQM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD+ KR+P DF
Sbjct: 122 IQMIEDLIANGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVDVDTNKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EP W+SPWG GRPGWHIECSAM FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPEEPHWNSPWGKGRPGWHIECSAMGGELFGQTFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAA----CQ--------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 305
SC A C S+V YW+HNG + +NEKMSKSLGNFFTIR + ++Y P +
Sbjct: 242 SCGAHNSSCNHNHGDKIIQSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVLKKYQPEVV 301
Query: 306 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 365
R F++ AHYRSPLNYS LD A +++ +Y TL + A E+
Sbjct: 302 RFFILRAHYRSPLNYSDAHLDDAKNSLARLYNTLNNVAPAAFELTEN------------- 348
Query: 366 INKLRDEFHARMSDDLNTSHILTGAFQ 392
N+ +F A M+DD T+ ++ F+
Sbjct: 349 TNEYTRKFFAAMNDDFGTAEAMSVLFE 375
>gi|317486410|ref|ZP_07945237.1| cysteinyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
gi|316922320|gb|EFV43579.1| cysteinyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
Length = 485
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 177/377 (46%), Positives = 251/377 (66%), Gaps = 9/377 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++ YN+M+++KE FTP+ +G VG+Y CG+TAY LSH+GHAR+AV+FD+L R L + EV
Sbjct: 1 MQFYNTMSRKKETFTPVRKGLVGVYACGITAYALSHIGHARSAVAFDILVRLLRYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII+RAND G + ++ Y + Y DM L + +PR ++H++++
Sbjct: 61 TFVRNFTDVDDKIIKRANDEGVSSTEIAETYIKAYHEDMDRLGVIRADIEPRATEHIQEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I + AY GDV+F V P YG+LSG+ ++ R+G RV K +P DF
Sbjct: 121 LNLTERLIADGKAYATPSGDVYFRVRSFPGYGKLSGRTPDDLRSGARVVPGDEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK GEP W+SPWG GRPGWHIECSAMS Y+ DIHGGG+DLIFPHHENEIAQ
Sbjct: 181 ALWKSAKPGEPYWESPWGKGRPGWHIECSAMSEKYIPLPLDIHGGGLDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AA + WMHNG V ++EKMSKSLGNF TIR I E Y LR+FL HYRSP
Sbjct: 241 TEAALGKPLANIWMHNGFVQVDSEKMSKSLGNFKTIRDILESYLAETLRYFLAGKHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE---FH 374
+++S+ +D + + +Y+ L++ + AL+ +E+ K A + + +L+ + F
Sbjct: 301 IDFSLDNMDESERSQKRVYECLREVDKALA--RENWKPG---AAPAELVEELKQQDQSFM 355
Query: 375 ARMSDDLNTSHILTGAF 391
+ DD+NT+ + F
Sbjct: 356 DALEDDVNTAAAMGHLF 372
>gi|145633713|ref|ZP_01789439.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 3655]
gi|144985473|gb|EDJ92294.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 3655]
Length = 459
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 255/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K E SW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENELSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGENFVETFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTEDT--------EKANGLAARLRELGAILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|262373040|ref|ZP_06066319.1| cysteinyl-tRNA synthetase [Acinetobacter junii SH205]
gi|262313065|gb|EEY94150.1| cysteinyl-tRNA synthetase [Acinetobacter junii SH205]
Length = 473
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 182/421 (43%), Positives = 264/421 (62%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G++ MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII RAN+ GE+ L+ R+ + D A+L C P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIARANENGESIQQLTARFIEAMNEDAANLGCAAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI+ +++ AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MISNLVDKGAAYPASNGDVYFEVTKFDKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A A+ Y + + +Q+ ++ + + + F+ M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFK-------AYQQTYGQKTVDALDQSFVER----FNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ +Q L +LR++ N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQAEQATVLYSTLRQLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|74311083|ref|YP_309502.1| cysteinyl-tRNA synthetase [Shigella sonnei Ss046]
gi|383177100|ref|YP_005455105.1| cysteinyl-tRNA synthetase [Shigella sonnei 53G]
gi|414574725|ref|ZP_11431934.1| cysteinyl-tRNA synthetase [Shigella sonnei 3233-85]
gi|415852442|ref|ZP_11528807.1| cysteinyl-tRNA synthetase [Shigella sonnei 53G]
gi|418262555|ref|ZP_12883934.1| cysteinyl-tRNA synthetase [Shigella sonnei str. Moseley]
gi|420357139|ref|ZP_14858155.1| cysteinyl-tRNA synthetase [Shigella sonnei 3226-85]
gi|420362062|ref|ZP_14862988.1| cysteinyl-tRNA synthetase [Shigella sonnei 4822-66]
gi|109894944|sp|Q3Z4P5.1|SYC_SHISS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|73854560|gb|AAZ87267.1| cysteine tRNA synthetase [Shigella sonnei Ss046]
gi|323163965|gb|EFZ49773.1| cysteinyl-tRNA synthetase [Shigella sonnei 53G]
gi|391288875|gb|EIQ47374.1| cysteinyl-tRNA synthetase [Shigella sonnei 3226-85]
gi|391289353|gb|EIQ47848.1| cysteinyl-tRNA synthetase [Shigella sonnei 3233-85]
gi|391296989|gb|EIQ55065.1| cysteinyl-tRNA synthetase [Shigella sonnei 4822-66]
gi|397903092|gb|EJL19399.1| cysteinyl-tRNA synthetase [Shigella sonnei str. Moseley]
Length = 461
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 228/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AY + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYAADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ E ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTEKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|349611156|ref|ZP_08890463.1| cysteinyl-tRNA synthetase [Neisseria sp. GT4A_CT1]
gi|348614537|gb|EGY64083.1| cysteinyl-tRNA synthetase [Neisseria sp. GT4A_CT1]
Length = 473
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 188/391 (48%), Positives = 239/391 (61%), Gaps = 30/391 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T+QKE FTPI V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 2 LTIYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF
Sbjct: 122 IAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYH 301
S A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y
Sbjct: 242 SVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYD 301
Query: 302 PLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPA 361
P +R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 302 PEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFELSENA-------- 353
Query: 362 AEDCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 -----NDYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|215485603|ref|YP_002328034.1| cysteinyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
gi|254781678|sp|B7UKK3.1|SYC_ECO27 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|215263675|emb|CAS08007.1| cysteinyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
Length = 461
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGRYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|238751080|ref|ZP_04612576.1| Cysteinyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
gi|238710770|gb|EEQ02992.1| Cysteinyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
Length = 473
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 252/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 14 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 73
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 74 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIPEI 133
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I + AYV GDV FAV+ P+YG LS Q L+ +AG RV + KRNP DF
Sbjct: 134 IELTERLIAREHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEIADVKRNPMDF 193
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 194 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 253
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + E Y +R+FL+S HYRS
Sbjct: 254 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLEYYDAETVRYFLMSGHYRSQ 313
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ +V +P AR F A M
Sbjct: 314 LNYSEENLKQARASLERLYTALRGTDVHAAPAGGAEFEAR---------------FRAAM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + I + + E++++ +LGL
Sbjct: 359 DDDFNTPEAYSVLFD-----LAREVNRLKTED--------ITAANGLAAELRKLAHVLGL 405
Query: 438 L 438
L
Sbjct: 406 L 406
>gi|416573459|ref|ZP_11767805.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|363571726|gb|EHL55630.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
Length = 461
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IDLTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + +P AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFN 351
>gi|419762171|ref|ZP_14288420.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|397745089|gb|EJK92298.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
Length = 478
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 19 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 78
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 79 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIAEI 138
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG LS Q L+ +AG RV V KRNP DF
Sbjct: 139 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVDVKRNPMDF 198
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 199 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 258
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 259 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 318
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++ AR A +D N
Sbjct: 319 LNYSEENLKQARSALERLYTALRGTDKSVDAAGGEAFEARFIEAMDDDFN 368
>gi|375000267|ref|ZP_09724607.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|353074955|gb|EHB40715.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
Length = 461
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IDLTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + +P AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFN 351
>gi|332160825|ref|YP_004297402.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665055|gb|ADZ41699.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860142|emb|CBX70464.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica W22703]
Length = 461
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 194/421 (46%), Positives = 251/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLQRPDLEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I + AYV GDV F+VE P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTERLIARNHAYVAANGDVMFSVESDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ +V +P AR F A M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDVNAAPAGGAEFEAR---------------FRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + I + + E++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKAED--------ITAANALAAELRKLAHVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|416526740|ref|ZP_11742645.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|416536050|ref|ZP_11748117.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|363557792|gb|EHL41997.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|363565156|gb|EHL49192.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
Length = 461
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IDLTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + +P AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFN 351
>gi|78357164|ref|YP_388613.1| cysteinyl-tRNA synthetase [Desulfovibrio alaskensis G20]
gi|109894898|sp|Q30ZH8.1|SYC_DESDG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|78219569|gb|ABB38918.1| cysteinyl-tRNA synthetase [Desulfovibrio alaskensis G20]
Length = 485
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 182/404 (45%), Positives = 255/404 (63%), Gaps = 10/404 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++T++KE F P GK +YVCG+TAYDL HLGHAR++V+FD+L RYL H +V
Sbjct: 1 MQLYNTLTRKKEKFIPQREGKASVYVCGITAYDLCHLGHARSSVAFDVLVRYLRHTGLDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII+RA + G ++ +Y + DM L CL +PR + H+ ++
Sbjct: 61 TFVRNFTDVDDKIIKRAGETGLTSTEVAEKYMAAFHEDMDRLGCLRADIEPRCTQHIGEM 120
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ +I+ AY GDV+F V +YG+LSG+ +++ R+G RVA K +P DF
Sbjct: 121 IALCEDLISKGKAYSTASGDVYFRVRSFASYGKLSGRDVDDMRSGARVAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK GEP W+SPWG GRPGWHIECSAMS +L DIHGGG DL+FPHHENEIAQ
Sbjct: 181 ALWKSAKPGEPYWESPWGNGRPGWHIECSAMSEKHLPLPLDIHGGGQDLVFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AA YW+HNG V N EKMSKSLGNF TIR I + Y P LR+FL++ HYRSP
Sbjct: 241 TEAATGKEFARYWVHNGFVQVNAEKMSKSLGNFSTIRDILQGYLPETLRYFLLTKHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE---FH 374
++++ +D A + IYQTL E L + P E+ ++++ + ++
Sbjct: 301 IDFTFDGMDEAEKNLRRIYQTLNLVENELQKTKWSAA-----PLPEEVLSEMDETERAWN 355
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 418
M DDLNT+ L F ++ +N + ++ Q + +L+
Sbjct: 356 EAMEDDLNTAAALGHIF-GLVRLVNRIIEDKTMRKSAQARDALL 398
>gi|117617683|ref|YP_857264.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117559090|gb|ABK36038.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 458
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 194/418 (46%), Positives = 254/418 (60%), Gaps = 27/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YD H+GH R V+FD++ RYL + ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYSGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + G L+ R + D L + P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIKRAAETGVTCDDLTARLIGDMHADFDALGMVRPDVEPRATQHIGEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +++ + AYV + GDV F V+ +YG+LSGQ LE +AG RV V KRNP DF
Sbjct: 122 IELVQSLLDKEHAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+D A + + + AR A M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPAAAAAGGDE-QVARFKEA---------------M 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
DD NT + F D ++ IN + K + +++ +L E+ VL IL
Sbjct: 346 DDDFNTPEAYSALF-DLVREIN---------RQKGEDMAVAAALGARLRELGAVLGIL 393
>gi|365157349|ref|ZP_09353622.1| cysteinyl-tRNA synthetase [Bacillus smithii 7_3_47FAA]
gi|363625250|gb|EHL76292.1| cysteinyl-tRNA synthetase [Bacillus smithii 7_3_47FAA]
Length = 465
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 178/381 (46%), Positives = 242/381 (63%), Gaps = 13/381 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +++YN++T++KE F P+ GKV MYVCG T Y+ H+G+AR A+ FD + RYLE
Sbjct: 1 MPIQLYNTLTRRKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYLEFRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+IR A +LGE+ +L+NR+ + Y D+ L C PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIRAARELGEDVPTLANRFIRAYFEDVEALGCKRADIHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I + AY V+GDV++ K +YG+LS Q ++ + G R+ V +K + D
Sbjct: 121 IIIEFIRTLEEKGYAYEVDGDVYYRTRKFKDYGKLSHQSIDELKVGARIEVGEKKEDALD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE SWDSPWG GRPGWHIECSAM+ HYL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEISWDSPWGKGRPGWHIECSAMARHYLGDTIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I +++ P ALR F++S HYR
Sbjct: 241 QSEALSGKTFARYWMHNGYININNEKMSKSLGNFVLVHDIIQKHDPDALRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRD 371
P+NYS L++A ++ + + Q+ +H K A N D I KL D
Sbjct: 301 PINYSEELLENAKTSLERLKTSYQNL--------KHRKEASTNLTENDHEWIEKIQKLHD 352
Query: 372 EFHARMSDDLNTSHILTGAFQ 392
EF M DD NT++ ++ F+
Sbjct: 353 EFVKEMDDDFNTANAISVLFE 373
>gi|290510194|ref|ZP_06549564.1| cysteinyl-tRNA synthetase [Klebsiella sp. 1_1_55]
gi|289776910|gb|EFD84908.1| cysteinyl-tRNA synthetase [Klebsiella sp. 1_1_55]
Length = 461
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++ AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSVDAAGGEAFEARFIEAMDDDFN 351
>gi|16128510|ref|NP_415059.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
MG1655]
gi|170080109|ref|YP_001729429.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
DH10B]
gi|238899807|ref|YP_002925603.1| cysteinyl-tRNA synthetase [Escherichia coli BW2952]
gi|300949224|ref|ZP_07163257.1| cysteinyl-tRNA synthetase [Escherichia coli MS 116-1]
gi|300954345|ref|ZP_07166803.1| cysteinyl-tRNA synthetase [Escherichia coli MS 175-1]
gi|301022849|ref|ZP_07186685.1| cysteinyl-tRNA synthetase [Escherichia coli MS 196-1]
gi|386596602|ref|YP_006093002.1| cysteinyl-tRNA synthetase [Escherichia coli DH1]
gi|387620285|ref|YP_006127912.1| cysteinyl-tRNA synthetase [Escherichia coli DH1]
gi|388476629|ref|YP_488815.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
W3110]
gi|417290179|ref|ZP_12077462.1| cysteine--tRNA ligase [Escherichia coli B41]
gi|417616919|ref|ZP_12267351.1| cysteinyl-tRNA synthetase [Escherichia coli G58-1]
gi|417946862|ref|ZP_12590070.1| cysteinyl-tRNA synthetase [Escherichia coli XH140A]
gi|417978453|ref|ZP_12619219.1| cysteinyl-tRNA synthetase [Escherichia coli XH001]
gi|418959182|ref|ZP_13511081.1| cysteinyl-tRNA synthetase [Escherichia coli J53]
gi|419941304|ref|ZP_14457994.1| cysteinyl-tRNA synthetase [Escherichia coli 75]
gi|422769750|ref|ZP_16823441.1| cysteinyl-tRNA synthetase [Escherichia coli E482]
gi|423701304|ref|ZP_17675763.1| cysteinyl-tRNA synthetase [Escherichia coli H730]
gi|432562434|ref|ZP_19799061.1| cysteinyl-tRNA synthetase [Escherichia coli KTE51]
gi|432736050|ref|ZP_19970825.1| cysteinyl-tRNA synthetase [Escherichia coli KTE42]
gi|433046606|ref|ZP_20234034.1| cysteinyl-tRNA synthetase [Escherichia coli KTE120]
gi|442590918|ref|ZP_21009668.1| Cysteinyl-tRNA synthetase [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|450239841|ref|ZP_21899168.1| cysteinyl-tRNA ligase [Escherichia coli S17]
gi|135097|sp|P21888.2|SYC_ECOLI RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558631|sp|B1XGC4.1|SYC_ECODH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|259511830|sp|C4ZUX4.1|SYC_ECOBW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|20664375|pdb|1LI5|A Chain A, Crystal Structure Of Cysteinyl-Trna Synthetase
gi|20664376|pdb|1LI5|B Chain B, Crystal Structure Of Cysteinyl-Trna Synthetase
gi|20664379|pdb|1LI7|A Chain A, Crystal Structure Of Cysteinyl-Trna Synthetase With
Cysteine Substrate Bound
gi|20664380|pdb|1LI7|B Chain B, Crystal Structure Of Cysteinyl-Trna Synthetase With
Cysteine Substrate Bound
gi|56966182|pdb|1U0B|B Chain B, Crystal Structure Of Cysteinyl-Trna Synthetase Binary
Complex With Trnacys
gi|41206|emb|CAA41983.1| cysteinyl-tRNA synthetase [Escherichia coli K-12]
gi|145692|gb|AAA23658.1| transfer RNA-Cys synthetase [Escherichia coli]
gi|1773207|gb|AAB40279.1| cysteinyl-tRNA synthetase [Escherichia coli]
gi|1786737|gb|AAC73628.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
MG1655]
gi|85674663|dbj|BAE76303.1| cysteinyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
gi|169887944|gb|ACB01651.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
DH10B]
gi|238860697|gb|ACR62695.1| cysteinyl-tRNA synthetase [Escherichia coli BW2952]
gi|260450291|gb|ACX40713.1| cysteinyl-tRNA synthetase [Escherichia coli DH1]
gi|299881060|gb|EFI89271.1| cysteinyl-tRNA synthetase [Escherichia coli MS 196-1]
gi|300318682|gb|EFJ68466.1| cysteinyl-tRNA synthetase [Escherichia coli MS 175-1]
gi|300451342|gb|EFK14962.1| cysteinyl-tRNA synthetase [Escherichia coli MS 116-1]
gi|315135208|dbj|BAJ42367.1| cysteinyl-tRNA synthetase [Escherichia coli DH1]
gi|323943145|gb|EGB39302.1| cysteinyl-tRNA synthetase [Escherichia coli E482]
gi|342361392|gb|EGU25531.1| cysteinyl-tRNA synthetase [Escherichia coli XH140A]
gi|344191882|gb|EGV45986.1| cysteinyl-tRNA synthetase [Escherichia coli XH001]
gi|345380793|gb|EGX12685.1| cysteinyl-tRNA synthetase [Escherichia coli G58-1]
gi|359331278|dbj|BAL37725.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
MDS42]
gi|384377884|gb|EIE35776.1| cysteinyl-tRNA synthetase [Escherichia coli J53]
gi|385712658|gb|EIG49600.1| cysteinyl-tRNA synthetase [Escherichia coli H730]
gi|386256217|gb|EIJ05905.1| cysteine--tRNA ligase [Escherichia coli B41]
gi|388400992|gb|EIL61672.1| cysteinyl-tRNA synthetase [Escherichia coli 75]
gi|431099667|gb|ELE04687.1| cysteinyl-tRNA synthetase [Escherichia coli KTE51]
gi|431286646|gb|ELF77470.1| cysteinyl-tRNA synthetase [Escherichia coli KTE42]
gi|431572510|gb|ELI45342.1| cysteinyl-tRNA synthetase [Escherichia coli KTE120]
gi|441608739|emb|CCP95581.1| Cysteinyl-tRNA synthetase [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|449324899|gb|EMD14820.1| cysteinyl-tRNA ligase [Escherichia coli S17]
gi|227964|prf||1714234A Cys-tRNA synthetase
Length = 461
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ +++ +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|354722388|ref|ZP_09036603.1| cysteinyl-tRNA synthetase [Enterobacter mori LMG 25706]
Length = 461
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 202/421 (47%), Positives = 252/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L +
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRFLGYTL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIVEMHKDFDALNILRPDSEPRATHHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+ ++I AYV E GDV F+V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IDITEKLIARGHAYVAENGDVMFSVPTDPTYGALSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ T R PAA + R F M
Sbjct: 302 LNYSEENLKQARSALERLYTALR-------------GTDRSVPAAGGEAFEAR--FVEVM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +L LRK+ + +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKSEDMAAAN-ALASHLRKLSS-------VLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|152969054|ref|YP_001334163.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|206578467|ref|YP_002239997.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae 342]
gi|262041635|ref|ZP_06014829.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|288936751|ref|YP_003440810.1| cysteinyl-tRNA synthetase [Klebsiella variicola At-22]
gi|365138546|ref|ZP_09345230.1| cysteinyl-tRNA synthetase [Klebsiella sp. 4_1_44FAA]
gi|378977390|ref|YP_005225531.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|419973228|ref|ZP_14488653.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419978412|ref|ZP_14493708.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419983798|ref|ZP_14498947.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419989850|ref|ZP_14504824.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419995729|ref|ZP_14510534.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420000640|ref|ZP_14515298.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420007734|ref|ZP_14522227.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420013201|ref|ZP_14527512.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420018286|ref|ZP_14532483.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420024379|ref|ZP_14538392.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420030137|ref|ZP_14543964.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420035243|ref|ZP_14548907.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420041573|ref|ZP_14555069.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420047634|ref|ZP_14560950.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420053338|ref|ZP_14566516.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420058181|ref|ZP_14571194.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420064468|ref|ZP_14577277.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420070446|ref|ZP_14583098.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420076023|ref|ZP_14588496.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420085684|ref|ZP_14597899.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421913625|ref|ZP_16343300.1| Cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421915765|ref|ZP_16345359.1| Cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|425078005|ref|ZP_18481108.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425080240|ref|ZP_18483337.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|425088638|ref|ZP_18491731.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|425090362|ref|ZP_18493447.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|428151347|ref|ZP_18999072.1| Cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428932885|ref|ZP_19006453.1| cysteinyl-tRNA ligase [Klebsiella pneumoniae JHCK1]
gi|428939917|ref|ZP_19013015.1| cysteinyl-tRNA ligase [Klebsiella pneumoniae VA360]
gi|449049411|ref|ZP_21731438.1| cysteinyl-tRNA ligase [Klebsiella pneumoniae hvKP1]
gi|187629829|sp|A6T5R2.1|SYC_KLEP7 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226710845|sp|B5Y0K6.1|SYC_KLEP3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|150953903|gb|ABR75933.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|206567525|gb|ACI09301.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae 342]
gi|259041024|gb|EEW42101.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|288891460|gb|ADC59778.1| cysteinyl-tRNA synthetase [Klebsiella variicola At-22]
gi|363655006|gb|EHL93879.1| cysteinyl-tRNA synthetase [Klebsiella sp. 4_1_44FAA]
gi|364516801|gb|AEW59929.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397348700|gb|EJJ41798.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397351483|gb|EJJ44566.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397354849|gb|EJJ47875.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397366713|gb|EJJ59328.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397368371|gb|EJJ60977.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397372855|gb|EJJ65327.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397380150|gb|EJJ72335.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397384435|gb|EJJ76555.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397390243|gb|EJJ82153.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397398994|gb|EJJ90651.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397401958|gb|EJJ93570.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397407979|gb|EJJ99355.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397416474|gb|EJK07647.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397418110|gb|EJK09269.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397424123|gb|EJK15030.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397433174|gb|EJK23824.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397437222|gb|EJK27791.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397441828|gb|EJK32194.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397447534|gb|EJK37724.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397448976|gb|EJK39131.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|405590984|gb|EKB64497.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405601730|gb|EKB74883.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|405607165|gb|EKB80135.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|405614046|gb|EKB86767.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|410112430|emb|CCM85925.1| Cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410121894|emb|CCM87984.1| Cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|426303207|gb|EKV65385.1| cysteinyl-tRNA ligase [Klebsiella pneumoniae VA360]
gi|426306692|gb|EKV68791.1| cysteinyl-tRNA ligase [Klebsiella pneumoniae JHCK1]
gi|427538659|emb|CCM95210.1| Cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|448876784|gb|EMB11763.1| cysteinyl-tRNA ligase [Klebsiella pneumoniae hvKP1]
Length = 461
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++ AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSVDAAGGEAFEARFIEAMDDDFN 351
>gi|332289654|ref|YP_004420506.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
gi|330432550|gb|AEC17609.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
Length = 459
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 194/421 (46%), Positives = 254/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++ ++KE+FTPI +VGMYVCGVT YDL H+GH R VSFD++ RYL +L +
Sbjct: 2 LKIFNTLKREKEIFTPIHPNQVGMYVCGVTVYDLCHIGHGRTFVSFDVIARYLRYLGYHL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENHETCEHLVDRMVAEMYKDFDALNIQRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I+N AYV + GDV F V+ P YG+LS Q L +AG RV ++ K+NP DF
Sbjct: 122 IALVQRLIDNGHAYVAQNGDVMFDVDSFPEYGKLSRQDLSQLQAGARVEINDIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWQSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + + Y ++R+FL++AHYRS
Sbjct: 242 SCCAHGGAYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLQHYDAESVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ G A A + + + F A M
Sbjct: 302 LNYSEENLKLAHSALERLYTALR------------GTDANATAAGGE---QFIEAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L+ F A LN LK +Q Q ++E+ +LGL
Sbjct: 347 DDDFNTPGALSVLFDMA-----RELNKLKAEQNPQTD--------AFAARLRELAGVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|288550004|ref|ZP_05968971.2| cysteine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
gi|288316405|gb|EFC55343.1| cysteine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
Length = 465
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 194/431 (45%), Positives = 260/431 (60%), Gaps = 23/431 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L +
Sbjct: 6 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 65
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L P +PR + H+ +I
Sbjct: 66 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHNDFDALNIQRPDSEPRATHHIHEI 125
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+ ++I AYV + GDV F+V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 126 IDITEKLIERGHAYVADNGDVMFSVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KAGEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKMSKAGEPSWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 246 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI---------NPAAEDCINK 368
LNYS L A A+ +Y L+ + ++ AR P A +
Sbjct: 306 LNYSEENLKQARSALERLYTALRGTDKSVPAAGGEAFEARFVEVMNDDFNTPEAYSVLFD 365
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK---------QPKQQQLSLIE 419
+ E + S+D+ ++ A L+ ++S L +L+++ Q + +++ IE
Sbjct: 366 MAREVNRLKSEDMAAAN----ALASHLRKLSSVLGLLEQEPDAFLQSGAQADEGEVAEIE 421
Query: 420 SLRKIENEVKE 430
L K E ++
Sbjct: 422 QLIKARLEARQ 432
>gi|417253478|ref|ZP_12045237.1| cysteine--tRNA ligase [Escherichia coli 4.0967]
gi|386217409|gb|EII33898.1| cysteine--tRNA ligase [Escherichia coli 4.0967]
Length = 461
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIVEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|335049775|ref|ZP_08542761.1| cysteine--tRNA ligase [Megasphaera sp. UPII 199-6]
gi|333762270|gb|EGL39774.1| cysteine--tRNA ligase [Megasphaera sp. UPII 199-6]
Length = 481
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 181/367 (49%), Positives = 245/367 (66%), Gaps = 5/367 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T++KE F P+ G+V MYVCG+T Y+ SH+G+AR V++D++ RYLEHL V
Sbjct: 4 LYVYNTLTRKKEKFVPLTTGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLEHLGYAV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+++NFTDVDDKII AN +++NRY Y M L PRVS+HM +I
Sbjct: 64 THIQNFTDVDDKIIHAANGEQVRWDTIANRYIASYFDVMDALHVRHADIYPRVSEHMPEI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI +++ AYVVE DV+++VEK +YG+LSG+ L++ +AG R+ VD+RK +P DFA
Sbjct: 124 IQMIQTLLDKGMAYVVEQDVYYSVEKFVDYGKLSGRTLDDMQAGARIEVDTRKHHPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEPSW+SPWG GRPGWHIECSAMS YL FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKGAKEGEPSWESPWGQGRPGWHIECSAMSCKYLGKTFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 CAACQDS-NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
A S V YW+HNG +T N+EKMSKSL NFF ++ + Y P A+R FLIS HYRSP
Sbjct: 244 EACTGVSPMVRYWLHNGFITINSEKMSKSLHNFFLVKDVLAYYDPDAVRFFLISNHYRSP 303
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
L+++ +L+ + ++ + ++ + E+A P G + A ++ ++F
Sbjct: 304 LDFTDARLEEMTRSLERLRTSIMNVLELATMP---AGGKSAEAAALLTEAQQVAEDFETA 360
Query: 377 MSDDLNT 383
M DD NT
Sbjct: 361 MCDDFNT 367
>gi|110640787|ref|YP_668515.1| cysteinyl-tRNA synthetase [Escherichia coli 536]
gi|123344273|sp|Q0TKB5.1|SYC_ECOL5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|110342379|gb|ABG68616.1| cysteinyl-tRNA synthetase [Escherichia coli 536]
Length = 461
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGLYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|238893488|ref|YP_002918222.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|402782012|ref|YP_006637558.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|238545804|dbj|BAH62155.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|402542876|gb|AFQ67025.1| Cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
Length = 461
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++ AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSVDAAGGEAFEARFIEAMDDDFN 351
>gi|90411646|ref|ZP_01219656.1| cysteinyl-tRNA synthetase [Photobacterium profundum 3TCK]
gi|90327536|gb|EAS43889.1| cysteinyl-tRNA synthetase [Photobacterium profundum 3TCK]
Length = 464
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 199/421 (47%), Positives = 258/421 (61%), Gaps = 24/421 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL + ++
Sbjct: 2 LKIYNSLTKQKEEFKPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHKDFDALGMKRPDIEPRATEFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M ++I AYV GDV F V K YGRLS Q L+ +AG RV +D KR+P DF
Sbjct: 122 ITMCERLIERGFAYVASNGDVMFEVSKFEEYGRLSRQDLDQLQAGARVDIDMAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWG GRPGWHIECSAM++ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y ++R+FL+S HYRS
Sbjct: 242 SCCATGSQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAESVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y +L+ ++ TA+ E+ + + F A M
Sbjct: 302 LNYSEENLKQARSALERLYTSLRGLDL----------TAQAE-GGEEFVTR----FTASM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F D ++ IN LK + ++ +L ++E+ ILGL
Sbjct: 347 NDDFNTPEAYSVLF-DMVREINR----LKADETIADNIAQASALGA---RLRELADILGL 398
Query: 438 L 438
L
Sbjct: 399 L 399
>gi|168798100|ref|ZP_02823107.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC508]
gi|189379362|gb|EDU97778.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC508]
Length = 461
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKHARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|295096713|emb|CBK85803.1| cysteinyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 465
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 194/431 (45%), Positives = 261/431 (60%), Gaps = 23/431 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L +
Sbjct: 6 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 65
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 66 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIHEI 125
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+ ++I AYV + GDV F+V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 126 IDITQKLIERGHAYVADNGDVMFSVPTDPTYGALSRQDLDQLQAGARVDVVDVKRNPMDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KAGEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKMSKAGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 246 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI---------NPAAEDCINK 368
LNYS L A A+ +Y L+ + ++ AR P A +
Sbjct: 306 LNYSEENLKQARAALERLYTALRGTDKSVPAAGGEAFEARFVEVMNDDFNTPEAYSVLFD 365
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK---------QPKQQQLSLIE 419
+ E + S+D+ ++ A L+ ++S L +L+++ Q +++ IE
Sbjct: 366 MAREVNRLKSEDMAAAN----ALASHLRKLSSVLGLLEQEPDLFLQSGAQADDGEVAEIE 421
Query: 420 SLRKIENEVKE 430
+L K E ++
Sbjct: 422 ALIKARLEARQ 432
>gi|418021756|ref|ZP_12660775.1| cysteinyl-tRNA synthetase [Candidatus Regiella insecticola R5.15]
gi|347602886|gb|EGY27832.1| cysteinyl-tRNA synthetase [Candidatus Regiella insecticola R5.15]
Length = 497
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 183/381 (48%), Positives = 241/381 (63%), Gaps = 15/381 (3%)
Query: 4 SKETGTVAAPKMDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVS 63
++ + + P+ + LKI+N++++QKE+F PI GK+GMYVCG+T YDL H+GH R V+
Sbjct: 22 ARPSSRIEEPRNIIMLKIFNTLSRQKEIFRPIDAGKIGMYVCGITVYDLCHIGHGRTFVA 81
Query: 64 FDLLYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCL 123
FD++ RYL +L +TYVRN TD+DDKII+RA + E L+ R E D L L
Sbjct: 82 FDVIVRYLRYLGYHLTYVRNITDIDDKIIKRAAENNETCQQLTERMMIEMYRDFDALNIL 141
Query: 124 PPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAG 182
P +P+ + H+ +I +I ++I AY+ +GDV FAV+ +PNYG LS Q LE+ +AG
Sbjct: 142 RPDEEPQATAHIAEIIALIKKLIEGKHAYIAADGDVVFAVKSAPNYGLLSRQNLEHLQAG 201
Query: 183 ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGG 242
RVA+ K +P DF LWK A G+PSWDSPWG GRPGWHIECSAM+A L FDIHGG
Sbjct: 202 ARVAIADGKEDPMDFVLWKRALPGDPSWDSPWGAGRPGWHIECSAMNAKQLGRHFDIHGG 261
Query: 243 GIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHP 302
G DL+FPHHENEIAQS A D V+YWMH G V KMSKSL NFFTIR + + Y
Sbjct: 262 GSDLLFPHHENEIAQSTCAHGDPYVNYWMHTGMVMVEKNKMSKSLNNFFTIRDLLDHYDA 321
Query: 303 LALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA 362
+R+FL+SAHYRS L+YS L + A+ +Y L+ + +TA A
Sbjct: 322 ETVRYFLMSAHYRSQLDYSEENLRQSRIALERLYIALRGTD----------ETASTAAAG 371
Query: 363 EDCINKLRDEFHARMSDDLNT 383
E+ + RD M DD NT
Sbjct: 372 ENFEKRFRDA----MDDDFNT 388
>gi|419195628|ref|ZP_13739035.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8A]
gi|378052504|gb|EHW14809.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8A]
Length = 461
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFNVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYIALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|294650979|ref|ZP_06728319.1| cysteine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
gi|292823080|gb|EFF81943.1| cysteine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
Length = 473
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 182/421 (43%), Positives = 263/421 (62%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G++ +YVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRNEGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII RAN+ GE+ L+ R+ D A+L C+ P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIARANENGESIQQLTARFIDAMNEDAANLGCVAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI+ ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MISTLVNKGAAYPASNGDVYFEVSKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEATTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A A+ Y + + +Q+ ++ + + + F+ M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFK-------AYQQVYGQKTVDALEQSFVER----FNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ +Q L +LR++ N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQAEQATVLYSTLRQLTN-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|386742349|ref|YP_006215528.1| cysteinyl-tRNA synthetase [Providencia stuartii MRSN 2154]
gi|384479042|gb|AFH92837.1| cysteinyl-tRNA synthetase [Providencia stuartii MRSN 2154]
Length = 462
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 254/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD + RYL +L ++
Sbjct: 2 LQIFNTLSRQKEEFKPIHPGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E SL+ R E D L L P +PR + H+++I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNETVDSLTTRMLAEMHKDFDALNILRPDSEPRATQHIDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V+ NYG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEITDLLIKRGHAYVADNGDVMFEVKTDKNYGQLSRQDLEQLQAGARVEVADSKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKALGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + E Y P +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDPETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ +Y L+ G + PA + K F M
Sbjct: 302 LNYTEENLKQARTALERLYTALR------------GTDKSVAPAGGEIFKK---RFEDAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + + ++ +E++++ +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REINRLKSENKV--------AANELASELRKLAGVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|260853742|ref|YP_003227633.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
gi|260866682|ref|YP_003233084.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
gi|415790436|ref|ZP_11495055.1| cysteinyl-tRNA synthetase [Escherichia coli EPECa14]
gi|415820945|ref|ZP_11509959.1| cysteinyl-tRNA synthetase [Escherichia coli OK1180]
gi|417192750|ref|ZP_12014597.1| cysteine--tRNA ligase [Escherichia coli 4.0522]
gi|417218201|ref|ZP_12023803.1| cysteine--tRNA ligase [Escherichia coli JB1-95]
gi|417299406|ref|ZP_12086636.1| cysteine--tRNA ligase [Escherichia coli 900105 (10e)]
gi|417590210|ref|ZP_12240929.1| cysteinyl-tRNA synthetase [Escherichia coli 2534-86]
gi|419201626|ref|ZP_13744853.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8B]
gi|419207530|ref|ZP_13750658.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8C]
gi|419214078|ref|ZP_13757109.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8D]
gi|419219795|ref|ZP_13762752.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8E]
gi|419231040|ref|ZP_13773831.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9B]
gi|419236371|ref|ZP_13779122.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9C]
gi|419241968|ref|ZP_13784617.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9D]
gi|419247379|ref|ZP_13789994.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9E]
gi|419253156|ref|ZP_13795706.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10A]
gi|419259194|ref|ZP_13801652.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10B]
gi|419264908|ref|ZP_13807295.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10C]
gi|419270854|ref|ZP_13813187.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10D]
gi|419282385|ref|ZP_13824605.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10F]
gi|419878696|ref|ZP_14400158.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9534]
gi|419879713|ref|ZP_14401143.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9545]
gi|419890227|ref|ZP_14410523.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9570]
gi|419902951|ref|ZP_14422099.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9942]
gi|419908910|ref|ZP_14427556.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10026]
gi|420090600|ref|ZP_14602368.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9602]
gi|420096953|ref|ZP_14608277.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9634]
gi|420105206|ref|ZP_14615764.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9455]
gi|420111644|ref|ZP_14621469.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9553]
gi|420115267|ref|ZP_14624843.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10021]
gi|420122529|ref|ZP_14631483.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10030]
gi|420128639|ref|ZP_14637191.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10224]
gi|420134779|ref|ZP_14642880.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9952]
gi|424747032|ref|ZP_18175241.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424755822|ref|ZP_18183676.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424771008|ref|ZP_18198173.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str.
CFSAN001632]
gi|425377365|ref|ZP_18761761.1| cysteine--tRNA ligase [Escherichia coli EC1865]
gi|257752391|dbj|BAI23893.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
gi|257763038|dbj|BAI34533.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
gi|323153431|gb|EFZ39686.1| cysteinyl-tRNA synthetase [Escherichia coli EPECa14]
gi|323178201|gb|EFZ63779.1| cysteinyl-tRNA synthetase [Escherichia coli OK1180]
gi|345345084|gb|EGW77437.1| cysteinyl-tRNA synthetase [Escherichia coli 2534-86]
gi|378056534|gb|EHW18774.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8B]
gi|378063186|gb|EHW25356.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8C]
gi|378068487|gb|EHW30587.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8D]
gi|378072849|gb|EHW34906.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8E]
gi|378082034|gb|EHW43980.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9B]
gi|378090593|gb|EHW52430.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9C]
gi|378094581|gb|EHW56375.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9D]
gi|378102477|gb|EHW64154.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9E]
gi|378107992|gb|EHW69610.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10A]
gi|378116471|gb|EHW77995.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10B]
gi|378119143|gb|EHW80638.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10C]
gi|378121799|gb|EHW83250.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10D]
gi|378139228|gb|EHX00469.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10F]
gi|386189931|gb|EIH78679.1| cysteine--tRNA ligase [Escherichia coli 4.0522]
gi|386193084|gb|EIH87383.1| cysteine--tRNA ligase [Escherichia coli JB1-95]
gi|386257198|gb|EIJ12689.1| cysteine--tRNA ligase [Escherichia coli 900105 (10e)]
gi|388334332|gb|EIL00929.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9534]
gi|388355205|gb|EIL20063.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9570]
gi|388370902|gb|EIL34398.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9545]
gi|388372985|gb|EIL36343.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9942]
gi|388374161|gb|EIL37362.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10026]
gi|394385165|gb|EJE62708.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10224]
gi|394385728|gb|EJE63248.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9602]
gi|394387139|gb|EJE64606.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9634]
gi|394398048|gb|EJE74261.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9553]
gi|394399442|gb|EJE75469.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9455]
gi|394407155|gb|EJE82022.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10021]
gi|394420883|gb|EJE94383.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10030]
gi|394421067|gb|EJE94561.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9952]
gi|408309823|gb|EKJ26938.1| cysteine--tRNA ligase [Escherichia coli EC1865]
gi|421941150|gb|EKT98570.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421947115|gb|EKU04204.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421950090|gb|EKU06987.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str.
CFSAN001630]
Length = 461
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYIALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|271501481|ref|YP_003334507.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech586]
gi|270345036|gb|ACZ77801.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech586]
Length = 461
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 184/368 (50%), Positives = 235/368 (63%), Gaps = 20/368 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L +V
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKIIRRA + GE L+NR E D L L P +PR + ++ +I
Sbjct: 62 KYVRNITDIDDKIIRRATENGETIEQLTNRMIDEMHTDFRALNILSPDEEPRATHYIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F+V+ +P YG LS Q LE +AG RV + KRNP DF
Sbjct: 122 IELVEKLIARRHAYVADNGDVMFSVDTAPGYGVLSRQDLEQLKAGARVEITEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KAGEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKAGEPSWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFT+R + Y +R+FLIS HYRS
Sbjct: 242 STCAHGGDYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLSHYDAETIRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNY+ L A ++ +Y L+ + ++ PAA E ++ RD
Sbjct: 302 LNYTEENLKQARASLERLYTALRGTDASV-------------PAAGGEAFEHRFRDA--- 345
Query: 376 RMSDDLNT 383
M DD NT
Sbjct: 346 -MDDDFNT 352
>gi|145298606|ref|YP_001141447.1| cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418360744|ref|ZP_12961412.1| cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|142851378|gb|ABO89699.1| Cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356688048|gb|EHI52617.1| cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 458
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 196/418 (46%), Positives = 253/418 (60%), Gaps = 27/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YD H+GH R V+FD++ RYL + ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYCGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + L+ R + D L + P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIKRAAETNVTCDDLTERLIGDMHQDFDALGMVRPDVEPRATQHISEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +I D AYV + GDV F V+ +YG+LSGQ LE +AG RV V KRNP DF
Sbjct: 122 IELVESLIAQDHAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVGVVDAKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y ++R+FL+S HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAESVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+D VA + + + AR A M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPVAAAAGGDE-QVARFVDA---------------M 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
DD NT + F D ++ IN + K + +S+ L E+ VL IL
Sbjct: 346 DDDFNTPEAYSALF-DLVREIN---------RQKAEDMSVAAGLGARLRELGAVLGIL 393
>gi|113460388|ref|YP_718450.1| cysteinyl-tRNA synthetase [Haemophilus somnus 129PT]
gi|123131947|sp|Q0I1Q1.1|SYC_HAES1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|112822431|gb|ABI24520.1| cysteinyl-tRNA synthetase [Haemophilus somnus 129PT]
Length = 459
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 195/421 (46%), Positives = 254/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL +L E+
Sbjct: 2 LKIFNTLTREKEVFKPISENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYEL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKIIRR+ + E L +R E D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIRRSLENRETCEQLVDRMVVEMYKDFDALNVLRPDFEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F VE YG+LS Q L +AG RV + K+NP DF
Sbjct: 122 IALVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLTQLQAGARVEISEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW+SPWG GRPGWHIECSAM+ +L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWNSPWGAGRPGWHIECSAMNCKHLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 242 SCCAHGNRYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A A+ +Y L+ + + F A+ A M
Sbjct: 302 LNYSEENLDLAHGALERLYTALRGTDKSAVAFGGENFIAQFTEA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + ++ F+ A +N L K + K L LR E+ ILGL
Sbjct: 347 NDDFNTPNAISVLFEMA-----REINRL-KNEDKLLADGLAARLR-------ELAGILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|402841392|ref|ZP_10889843.1| cysteine--tRNA ligase [Klebsiella sp. OBRC7]
gi|402283213|gb|EJU31734.1| cysteine--tRNA ligase [Klebsiella sp. OBRC7]
Length = 461
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 228/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG+LS Q L+ +AG RV V K NP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKHNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKFYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + P AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKNAEPAGGEAFEARFIEAMDDDFN 351
>gi|226950955|ref|YP_002806046.1| cysteinyl-tRNA synthetase [Clostridium botulinum A2 str. Kyoto]
gi|254781234|sp|C1FMX3.1|SYC_CLOBJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226842951|gb|ACO85617.1| cysteine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
Length = 465
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 174/404 (43%), Positives = 257/404 (63%), Gaps = 4/404 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T +KE F +V G+V MYVCG T Y+ H+G+AR V FD + RYLE+ +V
Sbjct: 1 MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I+RAN+ G L +R+ +EY D DL T PR ++ ME+I
Sbjct: 61 KFIQNFTDIDDKMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ +I AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA
Sbjct: 121 IKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K GEP+W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS
Sbjct: 181 IWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +
Sbjct: 241 EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARM 377
N+S+ LDS A+ +Y ++ + E L + E + + E + K ++++ +M
Sbjct: 301 NFSMELLDSTKSALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
DD NT+ ++ F D ++ +N+++ + K+ + L LI L
Sbjct: 359 DDDFNTADAISVIF-DLIRDVNTNVTIESSKELVKYTLDLIREL 401
>gi|418289253|ref|ZP_12901614.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM233]
gi|372199990|gb|EHP14134.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM233]
Length = 473
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 187/389 (48%), Positives = 238/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKELF PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKELFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 ---NGYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|385800588|ref|YP_005836992.1| cysteinyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
gi|309389952|gb|ADO77832.1| cysteinyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
Length = 483
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 183/427 (42%), Positives = 269/427 (62%), Gaps = 22/427 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T +KE F P+ + KV MYVCG+T + SH+GH R+ +++D++ R+LE+L +V
Sbjct: 2 IKVYNTLTGEKEEFKPVEKDKVKMYVCGLTVQNYSHIGHIRSVINYDVIRRFLEYLGYQV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y+ NFTD+++KI++RA + P +L+N+Y +L D+ + P RVS+++ +I
Sbjct: 62 DYISNFTDINEKIVQRAAEEDLKPAALANKYANAFLEDLREFNVKPADKYLRVSENVAEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+M+T +I AY V G+V+F+VE +YG+LSG+ L+ +AG R+AV+ KRNP DF
Sbjct: 122 IEMVTTLIEKGYAYEVNGNVYFSVESFADYGKLSGRNLDEMQAGARIAVNKEKRNPLDFG 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK ++ E WDSPWG G PGWHIECSAMS L S FDIHGGG+DLIFPHHENEIAQS
Sbjct: 182 LWKKVES-ETGWDSPWGEGWPGWHIECSAMSMKRLGSTFDIHGGGVDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V+YW+HNG V + EKMSKS GNFFT R++ + + +R+FL++ HYRSP+
Sbjct: 241 EAYSDQKFVNYWLHNGTVNLSGEKMSKSQGNFFTSREVLKEFSAEVVRYFLLTRHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK--------LR 370
++S +L+ A+ ++ I T + LS IN AAE+ I + +
Sbjct: 301 DFSYEKLEEAATSLTRIKNTRKQLAKVLS--------LDINSAAENKIEQEFFENIISKK 352
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKE 430
EF A + DD NT+ + G D INS +N K+ ++ +L+ KI E
Sbjct: 353 KEFIAALKDDFNTAEAI-GVIHDLAGEINSYINR-KEFDLNEKNFALLTKTEKI---FLE 407
Query: 431 VLRILGL 437
++ ILGL
Sbjct: 408 LIEILGL 414
>gi|238920879|ref|YP_002934394.1| cysteinyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
gi|259511831|sp|C5B8V6.1|SYC_EDWI9 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|238870448|gb|ACR70159.1| cysteinyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
Length = 461
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 198/421 (47%), Positives = 248/421 (58%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCGVT YDL H+GH R V FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVCFDVVARYLRYLGYRL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E+ L+ R E D L P +PR + H+ +I
Sbjct: 62 KYVRNVTDVDDKIIKRALENQESCEQLTERMLAEMHRDFDALNIARPDVEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I D AYV GDV FAV+ P+YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IALVEQLIARDHAYVASNGDVMFAVDTDPDYGVLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGAYVNCWMHSGMVMIDREKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ +VA P + T R F A M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDVAAQPTADETFTTR---------------FRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + Q + +++ + +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REINRLKGEDMAQAN--------ALAAQMRGLAHVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|407892682|ref|ZP_11151712.1| cysteinyl-tRNA ligase [Diplorickettsia massiliensis 20B]
Length = 470
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 179/379 (47%), Positives = 241/379 (63%), Gaps = 15/379 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++TQQKE F P++ G+V +YVCG+T YDL H+GHAR V+FD++ RYL++ V
Sbjct: 2 LKIYNTLTQQKETFKPLIAGQVSLYVCGMTVYDLCHIGHARVLVAFDVIVRYLKNRGLSV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y+RN TD+DDKII+RA + E+ L+ R + D A L +PPT +P+ ++ + +I
Sbjct: 62 KYIRNITDIDDKIIQRAQENHESITELTTRMIEAMHEDFAQLNLMPPTQEPKATESIAEI 121
Query: 139 KDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I +++ AY E D+F+A++ YG L+ Q LE R G RVAV+ K++P DF
Sbjct: 122 IQLIQILLDKGVAYQAENRDIFYAIDTFKTYGALAHQDLEKLRHGSRVAVELNKQDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EPSW+SPWGPGRPGWHIECSAMS L +FDIHGGG+DL+FPHH+NEIAQ
Sbjct: 182 VLWKAAKPNEPSWESPWGPGRPGWHIECSAMSMAALGEQFDIHGGGLDLVFPHHQNEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V W+H G V N +KMSKSLGNFFT+R + Y +R+FL+++HYRSP
Sbjct: 242 SEAATDKKFVQTWIHVGFVQVNRQKMSKSLGNFFTLRDMLAEYPAEVVRYFLMASHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA-EDCINKL----RDE 372
++YS L A A+ +Y TL F+ A +P +D + L +
Sbjct: 302 IHYSQENLQLAQAALQRLYTTL---------FEVDNLGASGHPEINQDSLTTLLSSYEES 352
Query: 373 FHARMSDDLNTSHILTGAF 391
F A M DD NT L F
Sbjct: 353 FQAAMDDDFNTPEALAVLF 371
>gi|432396401|ref|ZP_19639192.1| cysteinyl-tRNA synthetase [Escherichia coli KTE25]
gi|432722093|ref|ZP_19957018.1| cysteinyl-tRNA synthetase [Escherichia coli KTE17]
gi|432726636|ref|ZP_19961518.1| cysteinyl-tRNA synthetase [Escherichia coli KTE18]
gi|432740322|ref|ZP_19975044.1| cysteinyl-tRNA synthetase [Escherichia coli KTE23]
gi|432989634|ref|ZP_20178302.1| cysteinyl-tRNA synthetase [Escherichia coli KTE217]
gi|433109856|ref|ZP_20295732.1| cysteinyl-tRNA synthetase [Escherichia coli KTE150]
gi|430918408|gb|ELC39415.1| cysteinyl-tRNA synthetase [Escherichia coli KTE25]
gi|431268116|gb|ELF59597.1| cysteinyl-tRNA synthetase [Escherichia coli KTE17]
gi|431275345|gb|ELF66374.1| cysteinyl-tRNA synthetase [Escherichia coli KTE18]
gi|431286451|gb|ELF77277.1| cysteinyl-tRNA synthetase [Escherichia coli KTE23]
gi|431498086|gb|ELH77300.1| cysteinyl-tRNA synthetase [Escherichia coli KTE217]
gi|431631059|gb|ELI99378.1| cysteinyl-tRNA synthetase [Escherichia coli KTE150]
Length = 461
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 228/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMNDDFN 351
>gi|444380435|ref|ZP_21179568.1| Cysteinyl-tRNA synthetase [Enterovibrio sp. AK16]
gi|443675462|gb|ELT82191.1| Cysteinyl-tRNA synthetase [Enterovibrio sp. AK16]
Length = 460
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 196/421 (46%), Positives = 254/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T++KE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIYNSLTKKKEEFKPIHPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRFLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR + + +I
Sbjct: 62 KFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMYADFDALNMKRPDVEPRATQFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV GDV F V K YG+LS Q L+ +AG RV V+ K++P DF
Sbjct: 122 IALVERLIERGFAYVASNGDVLFEVAKFDEYGKLSRQDLDQLQAGARVDVEEAKKSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGNHFDIHGGGSDLTFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y +L+ + LS E G E+ I + F M
Sbjct: 302 LNYSEENLKQARASMERLYTSLRGLD--LSATAEGG---------EEFIER----FKVAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + +E K+ ++E+ +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REINRLKAED--------VEGASKLAARMRELAEVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|345888163|ref|ZP_08839277.1| cysteinyl-tRNA synthetase [Bilophila sp. 4_1_30]
gi|345041019|gb|EGW45221.1| cysteinyl-tRNA synthetase [Bilophila sp. 4_1_30]
Length = 485
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 174/374 (46%), Positives = 247/374 (66%), Gaps = 3/374 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++ YN+M+++KE FTP+ +G VG+Y CG+TAY LSH+GHAR+AV+FD+L R L + EV
Sbjct: 1 MQFYNTMSRKKETFTPVRKGLVGVYACGITAYALSHIGHARSAVAFDILVRLLRYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII+RAND G + ++ Y + Y DM L + +P+ ++H++++
Sbjct: 61 TFVRNFTDVDDKIIKRANDEGVSSTEIAETYIKAYHEDMDRLNVIRADIEPKATEHIQEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I + AY GDV+F V P YG+LSG+ ++ R+G RV K +P DF
Sbjct: 121 LNLTERLIADGKAYATPSGDVYFRVRSFPGYGKLSGRTPDDLRSGARVVPGDEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK GEP W+SPWG GRPGWHIECSAMS Y+ DIHGGG+DLIFPHHENEIAQ
Sbjct: 181 ALWKSAKPGEPYWESPWGKGRPGWHIECSAMSEKYIPLPLDIHGGGLDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AA + WMHNG V ++EKMSKSLGNF TIR I E Y LR+FL HYRSP
Sbjct: 241 TEAALGKPLANIWMHNGFVQVDSEKMSKSLGNFKTIRDILESYLAETLRYFLAGKHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+++S+ +D + + +Y+ L++ + AL+ +E+ K + + + F +
Sbjct: 301 IDFSLDNMDESERSQKRVYECLREVDKALA--RENWKPGAAPAELMEELKQQDQSFMDAL 358
Query: 378 SDDLNTSHILTGAF 391
DD+NT+ + F
Sbjct: 359 EDDVNTAAAMGHLF 372
>gi|350564143|ref|ZP_08932962.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium aerophilum AL3]
gi|349778143|gb|EGZ32502.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium aerophilum AL3]
Length = 456
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 191/423 (45%), Positives = 254/423 (60%), Gaps = 36/423 (8%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L+IYN+ T+QKE F PIV GKVG+YVCGVT YD H+GHAR V FD + R++
Sbjct: 1 MSLQIYNTETRQKETFKPIVPGKVGIYVCGVTVYDYCHIGHARVMVVFDTVVRHMRARGL 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YVRN TD+DDKII RA + E+ SL+ R+ + D L L P +P+ +D +
Sbjct: 61 EVKYVRNITDIDDKIINRAFENQESVQSLTERFIKAMHEDETALNILRPDIEPKATDFIP 120
Query: 137 QIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+I+ ++ +I AY GDV+F V+ +YGRLSG++ E+ AG RV ++ K++P
Sbjct: 121 EIQQLVNTLIEKGHAYAAPNGDVYFKVKSFESYGRLSGKKQEDLEAGARVEINPNKQDPM 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWKA+K EP+WDS WG GRPGWHIECSAMS + + DIHGGG+DL FPHHENEI
Sbjct: 181 DFVLWKASKENEPAWDSAWGQGRPGWHIECSAMSGSCIGERLDIHGGGMDLQFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A + V+ WMH G V +NEKMSKSL NFFTIR++ + YHP +R+FL+S+HYR
Sbjct: 241 AQSECAHGEHYVNTWMHVGFVRVDNEKMSKSLNNFFTIREVLKDYHPEVIRYFLLSSHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPLNY++ LD A + +Y LQ E L AE+ +F+
Sbjct: 301 SPLNYTIENLDIAKTNLARLYTALQAAEPGL--------------VAENT--DFEAKFNE 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT + F+ L K+ K QQ L+ L+ + N L
Sbjct: 345 AMDDDFNTPQAMAVLFE------------LVKEVNKTQQPGLVALLQSLANR-------L 385
Query: 436 GLL 438
GLL
Sbjct: 386 GLL 388
>gi|170683319|ref|YP_001742670.1| cysteinyl-tRNA synthetase [Escherichia coli SMS-3-5]
gi|222155312|ref|YP_002555451.1| Cysteinyl-tRNA synthetase [Escherichia coli LF82]
gi|331645713|ref|ZP_08346816.1| cysteine--tRNA ligase [Escherichia coli M605]
gi|366161381|ref|ZP_09461243.1| cysteinyl-tRNA synthetase [Escherichia sp. TW09308]
gi|386618953|ref|YP_006138533.1| cysteinyl-tRNA synthetase [Escherichia coli NA114]
gi|387615841|ref|YP_006118863.1| cysteinyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
gi|387828542|ref|YP_003348479.1| cysteinyl-tRNA synthetase [Escherichia coli SE15]
gi|417661098|ref|ZP_12310679.1| cysteinyl-tRNA synthetase [Escherichia coli AA86]
gi|432371305|ref|ZP_19614366.1| cysteinyl-tRNA synthetase [Escherichia coli KTE11]
gi|432380152|ref|ZP_19623115.1| cysteinyl-tRNA synthetase [Escherichia coli KTE15]
gi|432385981|ref|ZP_19628879.1| cysteinyl-tRNA synthetase [Escherichia coli KTE16]
gi|432405395|ref|ZP_19648117.1| cysteinyl-tRNA synthetase [Escherichia coli KTE28]
gi|432420637|ref|ZP_19663193.1| cysteinyl-tRNA synthetase [Escherichia coli KTE178]
gi|432498773|ref|ZP_19740551.1| cysteinyl-tRNA synthetase [Escherichia coli KTE216]
gi|432512732|ref|ZP_19749974.1| cysteinyl-tRNA synthetase [Escherichia coli KTE224]
gi|432557544|ref|ZP_19794235.1| cysteinyl-tRNA synthetase [Escherichia coli KTE49]
gi|432610258|ref|ZP_19846430.1| cysteinyl-tRNA synthetase [Escherichia coli KTE72]
gi|432615307|ref|ZP_19851439.1| cysteinyl-tRNA synthetase [Escherichia coli KTE75]
gi|432644949|ref|ZP_19880751.1| cysteinyl-tRNA synthetase [Escherichia coli KTE86]
gi|432654534|ref|ZP_19890252.1| cysteinyl-tRNA synthetase [Escherichia coli KTE93]
gi|432693314|ref|ZP_19928526.1| cysteinyl-tRNA synthetase [Escherichia coli KTE162]
gi|432697840|ref|ZP_19933012.1| cysteinyl-tRNA synthetase [Escherichia coli KTE169]
gi|432709359|ref|ZP_19944426.1| cysteinyl-tRNA synthetase [Escherichia coli KTE6]
gi|432744461|ref|ZP_19979165.1| cysteinyl-tRNA synthetase [Escherichia coli KTE43]
gi|432893189|ref|ZP_20105246.1| cysteinyl-tRNA synthetase [Escherichia coli KTE165]
gi|432902919|ref|ZP_20112536.1| cysteinyl-tRNA synthetase [Escherichia coli KTE194]
gi|432917706|ref|ZP_20122189.1| cysteinyl-tRNA synthetase [Escherichia coli KTE173]
gi|432925011|ref|ZP_20127102.1| cysteinyl-tRNA synthetase [Escherichia coli KTE175]
gi|432942407|ref|ZP_20139728.1| cysteinyl-tRNA synthetase [Escherichia coli KTE183]
gi|432980032|ref|ZP_20168811.1| cysteinyl-tRNA synthetase [Escherichia coli KTE211]
gi|432984216|ref|ZP_20172954.1| cysteinyl-tRNA synthetase [Escherichia coli KTE215]
gi|433037519|ref|ZP_20225136.1| cysteinyl-tRNA synthetase [Escherichia coli KTE113]
gi|433095455|ref|ZP_20281668.1| cysteinyl-tRNA synthetase [Escherichia coli KTE139]
gi|433100097|ref|ZP_20286207.1| cysteinyl-tRNA synthetase [Escherichia coli KTE145]
gi|433104663|ref|ZP_20290685.1| cysteinyl-tRNA synthetase [Escherichia coli KTE148]
gi|433143087|ref|ZP_20328265.1| cysteinyl-tRNA synthetase [Escherichia coli KTE168]
gi|433187320|ref|ZP_20371448.1| cysteinyl-tRNA synthetase [Escherichia coli KTE88]
gi|226735059|sp|B1LKE5.1|SYC_ECOSM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|170521037|gb|ACB19215.1| cysteinyl tRNA synthetase [Escherichia coli SMS-3-5]
gi|222032317|emb|CAP75056.1| Cysteinyl-tRNA synthetase [Escherichia coli LF82]
gi|281177699|dbj|BAI54029.1| cysteinyl-tRNA synthetase [Escherichia coli SE15]
gi|312945102|gb|ADR25929.1| cysteinyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
gi|330910316|gb|EGH38826.1| cysteinyl-tRNA synthetase [Escherichia coli AA86]
gi|331044465|gb|EGI16592.1| cysteine--tRNA ligase [Escherichia coli M605]
gi|333969454|gb|AEG36259.1| Cysteinyl-tRNA synthetase [Escherichia coli NA114]
gi|430899908|gb|ELC21986.1| cysteinyl-tRNA synthetase [Escherichia coli KTE11]
gi|430909487|gb|ELC30853.1| cysteinyl-tRNA synthetase [Escherichia coli KTE16]
gi|430911860|gb|ELC33128.1| cysteinyl-tRNA synthetase [Escherichia coli KTE15]
gi|430932312|gb|ELC52735.1| cysteinyl-tRNA synthetase [Escherichia coli KTE28]
gi|430947109|gb|ELC66816.1| cysteinyl-tRNA synthetase [Escherichia coli KTE178]
gi|431031922|gb|ELD44646.1| cysteinyl-tRNA synthetase [Escherichia coli KTE216]
gi|431044685|gb|ELD54945.1| cysteinyl-tRNA synthetase [Escherichia coli KTE224]
gi|431094220|gb|ELD99866.1| cysteinyl-tRNA synthetase [Escherichia coli KTE49]
gi|431151076|gb|ELE52111.1| cysteinyl-tRNA synthetase [Escherichia coli KTE72]
gi|431157494|gb|ELE58133.1| cysteinyl-tRNA synthetase [Escherichia coli KTE75]
gi|431184199|gb|ELE83964.1| cysteinyl-tRNA synthetase [Escherichia coli KTE86]
gi|431195273|gb|ELE94471.1| cysteinyl-tRNA synthetase [Escherichia coli KTE93]
gi|431236551|gb|ELF31756.1| cysteinyl-tRNA synthetase [Escherichia coli KTE162]
gi|431247034|gb|ELF41277.1| cysteinyl-tRNA synthetase [Escherichia coli KTE169]
gi|431251528|gb|ELF45535.1| cysteinyl-tRNA synthetase [Escherichia coli KTE6]
gi|431295558|gb|ELF85297.1| cysteinyl-tRNA synthetase [Escherichia coli KTE43]
gi|431425080|gb|ELH07154.1| cysteinyl-tRNA synthetase [Escherichia coli KTE165]
gi|431436449|gb|ELH17964.1| cysteinyl-tRNA synthetase [Escherichia coli KTE194]
gi|431446580|gb|ELH27324.1| cysteinyl-tRNA synthetase [Escherichia coli KTE173]
gi|431448483|gb|ELH29198.1| cysteinyl-tRNA synthetase [Escherichia coli KTE175]
gi|431453958|gb|ELH34337.1| cysteinyl-tRNA synthetase [Escherichia coli KTE183]
gi|431494027|gb|ELH73617.1| cysteinyl-tRNA synthetase [Escherichia coli KTE211]
gi|431505959|gb|ELH84563.1| cysteinyl-tRNA synthetase [Escherichia coli KTE215]
gi|431555054|gb|ELI28912.1| cysteinyl-tRNA synthetase [Escherichia coli KTE113]
gi|431619511|gb|ELI88431.1| cysteinyl-tRNA synthetase [Escherichia coli KTE139]
gi|431622220|gb|ELI91001.1| cysteinyl-tRNA synthetase [Escherichia coli KTE145]
gi|431634346|gb|ELJ02593.1| cysteinyl-tRNA synthetase [Escherichia coli KTE148]
gi|431666454|gb|ELJ33088.1| cysteinyl-tRNA synthetase [Escherichia coli KTE168]
gi|431709673|gb|ELJ74126.1| cysteinyl-tRNA synthetase [Escherichia coli KTE88]
Length = 461
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 228/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMNDDFN 351
>gi|71065916|ref|YP_264643.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
gi|109894925|sp|Q4FRZ9.1|SYC_PSYA2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71038901|gb|AAZ19209.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
Length = 488
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 195/424 (45%), Positives = 266/424 (62%), Gaps = 32/424 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IY+S+T +K+ F P+V GKVGMYVCG+T YD H+GHAR V FD+ R+L L +V
Sbjct: 14 LVIYDSLTGRKQSFKPLVEGKVGMYVCGMTVYDYCHIGHARVMVGFDMAVRWLAQLGYDV 73
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII RA + GE +L+ R+ D L C P +PR +D+++++
Sbjct: 74 NYVRNITDIDDKIIARAAENGEEIGALTQRFITAMHEDATALGCQSPNAEPRATDYIDEM 133
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ MI +++ND AY + GDV++AV+ +YG+LS + L++ +AG RV V++ KRNP DF
Sbjct: 134 QQMIETLVSNDYAYAGDNGDVYYAVDSFADYGKLSKRNLDDMQAGSRVEVENDKRNPFDF 193
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EP W S WG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 194 VLWKAAKPDEPQWVSSWGQGRPGWHIECSAMSTKCLGNTFDIHGGGHDLQFPHHENEIAQ 253
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA WMH G + + EKMSKSLGNFFTIR + +Y P +R FL+S+HYRS
Sbjct: 254 SEAATGCEYARNWMHVGFINVDGEKMSKSLGNFFTIRDVMAKYLPETVRFFLLSSHYRSQ 313
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT-----ARINPA-----AEDCIN 367
+N+S LD A +++ +YQ L+ E Q+ G+T A IN A +D I
Sbjct: 314 VNFSDSALDEAHNSLSRLYQALKVVE------QQKGQTLIVDDALINNAYASAPGQDFIK 367
Query: 368 KLRDEFHAR--------MSDDLNTS---HILTGAFQDA--LKFINSSLNMLKKKQPKQQQ 414
+ D+F++ ++ D+N + + A+Q A LK + +LN+L +QP QQ
Sbjct: 368 AMNDDFNSSTAISVLFGLARDINKASKVEDIESAWQLAQQLKALAQTLNIL--QQPVQQF 425
Query: 415 LSLI 418
L +
Sbjct: 426 LQAV 429
>gi|188026279|ref|ZP_02961521.2| hypothetical protein PROSTU_03559 [Providencia stuartii ATCC 25827]
gi|188022312|gb|EDU60352.1| cysteine--tRNA ligase [Providencia stuartii ATCC 25827]
Length = 494
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 254/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD + RYL +L ++
Sbjct: 34 LQIFNTLSRQKEEFKPIHPGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 93
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E SL+ R E D L L P +PR + H+++I
Sbjct: 94 NYVRNVTDIDDKIIKRAAENNETVDSLTTRMLAEMHKDFDALNILRPDSEPRATQHIDEI 153
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V+ NYG+LS Q LE +AG RV V KRNP DF
Sbjct: 154 IEITDLLIKRGHAYVADNGDVMFEVKTDKNYGQLSRQDLEQLQAGARVEVADSKRNPMDF 213
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 214 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKALGNHFDIHGGGSDLMFPHHENEIAQ 273
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + E Y P +R+FL+S HYRS
Sbjct: 274 SSCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDPETVRYFLLSGHYRSQ 333
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ +Y L+ G + PA + K F M
Sbjct: 334 LNYTEENLKQARTALERLYTALR------------GTDKSVAPAGGEIFKK---RFEDAM 378
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + + ++ +E++++ +LGL
Sbjct: 379 NDDFNTPEAYSVLFDMA-----REINRLKSENKV--------AANELASELRKLAGVLGL 425
Query: 438 L 438
L
Sbjct: 426 L 426
>gi|423197293|ref|ZP_17183876.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila SSU]
gi|404630981|gb|EKB27617.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila SSU]
Length = 458
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 196/419 (46%), Positives = 254/419 (60%), Gaps = 29/419 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YD H+GH R V+FD++ RYL + ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYSGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + G L+ R + D L + P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIKRAAETGVTCDDLTERLIGDMHADFDALGMVRPDVEPRATQHIGEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +++ + AYV + GDV F V+ +YG+LSGQ LE +AG RV V KRNP DF
Sbjct: 122 IELVQSLLDKEHAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
LNYS L A A+ +Y L+D E A + E + AR A
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPEAAAAGGDE--QVARFKEA--------------- 344
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT + F D ++ IN + K + +++ L E+ VL IL
Sbjct: 345 MDDDFNTPEAYSALF-DLVREIN---------RQKGEDMAVAAGLGARLRELGAVLGIL 393
>gi|167550932|ref|ZP_02344688.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205324269|gb|EDZ12108.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 461
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGTDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + +P AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFN 351
>gi|261378624|ref|ZP_05983197.1| cysteine--tRNA ligase [Neisseria cinerea ATCC 14685]
gi|269144957|gb|EEZ71375.1| cysteine--tRNA ligase [Neisseria cinerea ATCC 14685]
Length = 473
Score = 364 bits (934), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 188/391 (48%), Positives = 240/391 (61%), Gaps = 30/391 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T+QKE FTPI V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 2 LNIYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF
Sbjct: 122 IAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYH 301
S A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y
Sbjct: 242 SVGASGHSCGHNHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYD 301
Query: 302 PLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPA 361
P +R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 302 PEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAKFDLFEN--------- 352
Query: 362 AEDCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+N F+A M+DD T + F+
Sbjct: 353 ----VNDYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|238791509|ref|ZP_04635147.1| Cysteinyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
gi|238729125|gb|EEQ20641.1| Cysteinyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
Length = 461
Score = 364 bits (934), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 195/421 (46%), Positives = 249/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E+ L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRALENNESCEQLTTRMLAEMHKDFDALNLKRPDLEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I D AYV GDV FAV+ P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IALTERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWASPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ G A PA + F A M
Sbjct: 302 LNYSEENLKQARASLERLYTALR------------GTDANATPAGG---AEFEARFRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + I + + E++++ +LGL
Sbjct: 347 DDDFNTPEAYSALFD-----IAREVNRLKTED--------ITAANGLAAELRKLAHVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|416552292|ref|ZP_11757008.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|363564518|gb|EHL48565.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
Length = 461
Score = 364 bits (934), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IDLTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + +P AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEVFEARFVEAMNDDFN 351
>gi|302390937|ref|YP_003826757.1| cysteinyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
gi|302203014|gb|ADL11692.1| cysteinyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
Length = 481
Score = 364 bits (934), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 180/394 (45%), Positives = 252/394 (63%), Gaps = 13/394 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TL+IYN++TQ+KE F P+ + +V +Y CG T YD H+G+ARA + D+L RYLE+
Sbjct: 1 MTLQIYNTLTQKKEEFEPLDQDEVKLYSCGPTVYDYFHIGNARAFILPDILKRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V +V NFTDVDDK+I+RAN+ L++R+ Y D L P+ ++H+
Sbjct: 61 NVLHVTNFTDVDDKMIKRANEEEIEIEELADRFITAYFEDTERLNIKQADVYPKATEHIS 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I +++ ++ + AY V+GDVFFAV K +YG+LS Q LE +G RV V+ +K +P D
Sbjct: 121 DIIELVKKLEDKGYAYEVDGDVFFAVRKFADYGKLSNQELEELTSGSRVEVNDKKEDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +K GEPSW+SPWG GRPGWHIECSAMS YL +FD H GG+DL+FPHHENEIA
Sbjct: 181 FVLWKKSKEGEPSWESPWGTGRPGWHIECSAMSMCYLGEEFDFHTGGVDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ A V+YW+HNG++ + EKMSKSLGNFFT R I + Y LR FLIS HYRS
Sbjct: 241 QNEAGVGSQVVNYWLHNGYINVDGEKMSKSLGNFFTTRDILQDYSAEVLRFFLISKHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL------- 369
P+N+S +LD+A+ ++ Q LQ+ L + + A + P ++ + +L
Sbjct: 301 PINFSDAELDNAAKSL----QRLQNTVNKLKDLLDRDR-ADLKPGNKEELQELEKKIKAK 355
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLN 403
R++F M DDLNT+ + GA + K +N +N
Sbjct: 356 REKFEEAMDDDLNTA-LAIGALHELAKELNIVVN 388
>gi|256829728|ref|YP_003158456.1| cysteinyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
gi|256578904|gb|ACU90040.1| cysteinyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
Length = 485
Score = 364 bits (934), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 194/424 (45%), Positives = 260/424 (61%), Gaps = 10/424 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYNS+T++KE F P+ G V MYVCG+TAYD H+GHAR+AV FD+L RYL ++ +V
Sbjct: 1 MQIYNSLTRKKEEFIPLKPGHVSMYVCGITAYDYCHIGHARSAVVFDVLVRYLRYIGMQV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII RAN G + S++ Y + DM L L +P+ ++H++++
Sbjct: 61 TFVRNFTDVDDKIINRANREGTDFESIARSYIDAFYTDMDRLGILRADIEPKATEHIKEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AY GDV+F V +YG+LSG+ +E+ +G R+ K +P DF
Sbjct: 121 IELCENLIAKKHAYSTPSGDVYFRVRSYADYGKLSGRNIEDLMSGARIEPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK AK GEPSW SPWGPGRPGWHIECSAMS YL FDIHGGG DL FPHHENE AQ
Sbjct: 181 ALWKGAKPGEPSWPSPWGPGRPGWHIECSAMSERYLPLPFDIHGGGQDLAFPHHENERAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AA V YW+HNG V N+EKMSKSL NF TIR I Y P LR FLI+ HYRSP
Sbjct: 241 TEAATDKQFVRYWVHNGFVQINSEKMSKSLNNFVTIRDILANYLPEVLRFFLITKHYRSP 300
Query: 318 LNYSVLQLDSASDAV--FYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
L+Y+ L+ + A+ Y+ +T + VA + + A I A L ++
Sbjct: 301 LDYTSDALEESERALKRIYLTKTAAEAHVAGTKWTATPLPAEIVVEA----TALEAKWDD 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD+NT+ L F +K +N L K+ +Q + +I K+ EVL +
Sbjct: 357 SMADDMNTAAALGHVFV-LMKIVNRILEDKTLKKSEQGR-DMIRHALKLFERWGEVLGLF 414
Query: 436 GLLP 439
L+P
Sbjct: 415 -LMP 417
>gi|386309410|ref|YP_006005466.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418240598|ref|ZP_12867136.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433550489|ref|ZP_20506533.1| Cysteinyl-tRNA synthetase [Yersinia enterocolitica IP 10393]
gi|318604716|emb|CBY26214.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|351780011|gb|EHB22100.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431789624|emb|CCO69573.1| Cysteinyl-tRNA synthetase [Yersinia enterocolitica IP 10393]
Length = 461
Score = 364 bits (934), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 194/421 (46%), Positives = 251/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLQRPDLEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I + AYV GDV F+VE P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTERLIARNHAYVAANGDVMFSVESDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLVYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ +V +P AR F A M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDVNAAPAGGAEFEAR---------------FRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + I + + E++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKAED--------ITAANALAAELRKLAHVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|340363807|ref|ZP_08686122.1| cysteine--tRNA ligase [Neisseria macacae ATCC 33926]
gi|339884918|gb|EGQ74673.1| cysteine--tRNA ligase [Neisseria macacae ATCC 33926]
Length = 473
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 187/389 (48%), Positives = 238/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE FTPI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREYGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFELSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|300857267|ref|YP_003782251.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
gi|300437382|gb|ADK17149.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
Length = 465
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 182/442 (41%), Positives = 268/442 (60%), Gaps = 22/442 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KI+N+MT++KE F P+ +V MYVCG T Y+ H+G+AR V FD + RYLE+ +V
Sbjct: 1 MKIFNTMTREKEEFVPLDSDEVKMYVCGPTVYNFFHIGNARTFVVFDTVRRYLEYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I++A D L +++ +EY D L T PR + ++ +I
Sbjct: 61 RFVQNFTDIDDKMIKKAQDEHITVKELGDKFIKEYYKDADALHIKRATVNPRATLYITKI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I +I+ D AY ++GDV+F+ +K NYG+LSGQ +++ RAG R+ VD RK++P DFA
Sbjct: 121 IEFIGDLIDRDYAYEIDGDVYFSTKKFSNYGKLSGQNIDDLRAGARIDVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK K GEP+W+SPWG GRPGWHIECS M+ L DIH GG DL+FPHHENEIAQS
Sbjct: 181 VWKGQKPGEPAWESPWGMGRPGWHIECSCMAHDLLGETIDIHAGGSDLMFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+ YWMH+ V NN+KMSKSL NFFT+R+I E+Y P +R F++S HYR+ +
Sbjct: 241 EGRTGKTFARYWMHSAFVNVNNQKMSKSLNNFFTVREILEKYEPDVIRMFMLSGHYRTQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALS-----PFQEHGKTARINPAAEDCINKLRDEF 373
N+S+ LDS A+ +Y ++ + E L P E+ K R + + K + +
Sbjct: 301 NFSMELLDSTKSALDRLYNSITNLENLLDNKEDIPISENEKEYR------NKLGKYKQRY 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
+M DD NT+ ++ F D +K IN S+N + S +E +R N ++E+
Sbjct: 355 IEKMDDDFNTADAISVIF-DLVKDINVSIN----------KDSSVEVIRDSLNLIRELGA 403
Query: 434 ILGLLPPGAYSEVKTAFLVLLH 455
LG+L ++ L+
Sbjct: 404 PLGILQQSKRGSIEKEIEALIE 425
>gi|168178810|ref|ZP_02613474.1| cysteinyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
gi|182669931|gb|EDT81907.1| cysteinyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
Length = 465
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 174/404 (43%), Positives = 257/404 (63%), Gaps = 4/404 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T +KE F +V G+V MYVCG T Y+ H+G+AR V FD + RYLE+ +V
Sbjct: 1 MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I+RAN+ G L +R+ +EY D DL T PR ++ ME+I
Sbjct: 61 KFIQNFTDIDDKMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ +I AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA
Sbjct: 121 IKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K GEP+W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS
Sbjct: 181 IWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +
Sbjct: 241 EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARM 377
N+S+ LDS A+ +Y ++ + E L + E + + E + K ++++ +M
Sbjct: 301 NFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
DD NT+ ++ F D ++ +N+++ + K+ + L LI L
Sbjct: 359 DDDFNTADAISVIF-DLIRDVNTNVTIESSKELVKYTLDLIREL 401
>gi|119471530|ref|ZP_01613944.1| cysteinyl-tRNA synthetase [Alteromonadales bacterium TW-7]
gi|119445473|gb|EAW26759.1| cysteinyl-tRNA synthetase [Alteromonadales bacterium TW-7]
Length = 459
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 195/408 (47%), Positives = 247/408 (60%), Gaps = 24/408 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T+QKE F P+V GK+ MYVCG+T YD H+GHAR V FD++ RYL H+ +
Sbjct: 2 VQIYNTLTRQKEQFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RAN+ E+ L+ R + D L L P +P V+ HM++I
Sbjct: 62 KYVRNITDVDDKIIKRANENKESINDLTLRMTKAMHEDFDSLNMLRPDVEPTVTGHMDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ ++I AYV +GDV F V YG LS Q L ++G RV V K +P DF
Sbjct: 122 IEMVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSL NFFT+R + + Y P ++R+FLIS HYRS
Sbjct: 242 SCCANNGEYVNTWIHTGMVQVNKEKMSKSLDNFFTVRDVLKEYDPESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A ++ IY L+D + P + E N+ +F M
Sbjct: 302 LNYSQENLDQARSSLERIYTALRD----VKPIE-----------CELESNEFVIKFRKAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ-QLSLIESLRKI 424
DD NT L F+ + LN +K+ Q QL+ I LR I
Sbjct: 347 DDDFNTPEALPVLFE-----LAKELNRVKESDAIQAGQLAFI--LRTI 387
>gi|88941991|sp|Q65UY1.2|SYC_MANSM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 458
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 200/422 (47%), Positives = 250/422 (59%), Gaps = 32/422 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE F PI KVGMYVCGVT YDL H GH R VSFD++ RYL +L ++
Sbjct: 2 LKIFNTLTREKEEFKPINPNKVGMYVCGVTVYDLCHFGHGRTFVSFDVITRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L R E D L L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVERMIAEMHKDFDALNILRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ +I AYV E GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 IAMVETLIRRGHAYVAEDGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNDKELGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T N EKMSKSL NFFTIR I +Y ++R+F ++A YRS
Sbjct: 242 SCCAHDGEYVNYWLHTGMLTINEEKMSKSLNNFFTIRDILTKYDAESVRYFFLTAQYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS + A A+ +Y L+ CE P AED + +F M
Sbjct: 302 LDYSEENIGLARKALERLYTALRGCETVEIP-------------AED---QYVIDFKTAM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ A +N LK + Q K QL+ + +K++ +LG
Sbjct: 346 DDDFNTPGALAVLFELA-----REINKLKTEDQTKANQLA---------SRLKQLAGVLG 391
Query: 437 LL 438
LL
Sbjct: 392 LL 393
>gi|331268391|ref|YP_004394883.1| cysteinyl-tRNA synthetase [Clostridium botulinum BKT015925]
gi|329124941|gb|AEB74886.1| cysteinyl-tRNA synthetase [Clostridium botulinum BKT015925]
Length = 472
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 177/409 (43%), Positives = 254/409 (62%), Gaps = 14/409 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K++N+MT+QKE F PI G+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 7 MKLFNTMTRQKEEFKPIKDGEVNMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYKGYKV 66
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I++AN+ L +R+ +EY D L T PR ++ M++I
Sbjct: 67 NFIQNFTDIDDKMIKKANEENITVKELGDRFIEEYYKDSDGLNIKRATVNPRATEFMDEI 126
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +I+ AY V+GDV+F+ +K YG+LSGQ LE+ +AG R+ VD RK++P DFA
Sbjct: 127 VAFVKDLIDKGYAYKVDGDVYFSTKKFTEYGKLSGQNLEDLQAGARITVDERKQDPMDFA 186
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK K GEPSW+SPWG GRPGWHIECS M+ L DIH GG DL+FPHHENEIAQS
Sbjct: 187 IWKNEKPGEPSWESPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPHHENEIAQS 246
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + +YWMH+ ++ NN+KMSKSL NFFT R+I ERY +R F++SAHYR+PL
Sbjct: 247 EARNGKAFANYWMHSAYLNINNKKMSKSLNNFFTTREILERYDAEVIRLFMLSAHYRTPL 306
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED------CINKLRDE 372
N+S L+SA + +Y ++ + E L +I ED +N +++
Sbjct: 307 NFSDELLESAKASNERLYNSIGNLERLLDE-------VKIEKMTEDEKEYTKVLNSYKEK 359
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
+ +M DD NT+ + F D +K IN+ +N K+ L +I L
Sbjct: 360 YIEKMDDDFNTADAIAVIF-DLIKEINTHVNADSSKELVNYSLEIIREL 407
>gi|378768199|ref|YP_005196670.1| cysteinyl-tRNA synthetase [Pantoea ananatis LMG 5342]
gi|386080338|ref|YP_005993863.1| cysteinyl-tRNA synthetase [Pantoea ananatis PA13]
gi|354989519|gb|AER33643.1| cysteinyl-tRNA synthetase CysS [Pantoea ananatis PA13]
gi|365187683|emb|CCF10633.1| Cysteinyl-tRNA synthetase [Pantoea ananatis LMG 5342]
Length = 461
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 191/421 (45%), Positives = 252/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE FTPI GK+GMYVCG+T YDL H+GH R V+FD++ RYL ++ +V
Sbjct: 2 LKIYNTLSRQKEEFTPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRYVGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ +L+NR E D L LPP +PR + H+ +I
Sbjct: 62 NYVRNITDIDDKIIKRANENGESIETLTNRMIAEMHSDFDALGILPPDREPRATRHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV E GDV F V +YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 VELVEKLIARGHAYVAENGDVMFDVLSDVDYGALSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KA EPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKADEPSWPSPWGQGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY L+ A A+ +Y L+ + A D F M
Sbjct: 302 LNYGEDNLNQARAALERLYTALRHTD---------------RNAVADGGEAFEARFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + + + + +++E+ +LG+
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRLKGED--------MTAANALAAKLREIANVLGI 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|290968519|ref|ZP_06560058.1| cysteine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
gi|290781515|gb|EFD94104.1| cysteine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
Length = 481
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 181/367 (49%), Positives = 245/367 (66%), Gaps = 5/367 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T++KE F P+ G+V MYVCG+T Y+ SH+G+AR V++D++ RYLEHL V
Sbjct: 4 LYVYNTLTRKKEKFVPLTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLEHLGYAV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+++NFTDVDDKII AN +++NRY Y M L PRVS+HM +I
Sbjct: 64 THIQNFTDVDDKIIHAANGEQVRWDTIANRYIASYFDVMDALHVRHADIYPRVSEHMPEI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI +++ AYVVE DV+++VEK +YG+LSG+ L++ +AG R+ VD+RK +P DFA
Sbjct: 124 IQMIQTLLDKGMAYVVEQDVYYSVEKFVDYGKLSGRTLDDMQAGARIEVDTRKHHPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEPSW+SPWG GRPGWHIECSAMS YL FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKGAKEGEPSWESPWGQGRPGWHIECSAMSCKYLGKTFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 CAACQDS-NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
A S V YW+HNG +T N+EKMSKSL NFF ++ + Y P A+R FLIS HYRSP
Sbjct: 244 EACTGVSPMVRYWLHNGFITINSEKMSKSLHNFFLVKDVLAYYDPDAVRFFLISNHYRSP 303
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
L+++ +L+ + ++ + ++ + E+A P G + A ++ ++F
Sbjct: 304 LDFTDARLEEMTRSLERLRTSIMNVLELATMP---AGGKSAEAAALLTEAQQVAEDFETA 360
Query: 377 MSDDLNT 383
M DD NT
Sbjct: 361 MCDDFNT 367
>gi|288574958|ref|ZP_06393315.1| cysteinyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570699|gb|EFC92256.1| cysteinyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 469
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 187/426 (43%), Positives = 265/426 (62%), Gaps = 21/426 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L +YN +T++KE F P+ G+VG Y CG T YD H+G+AR + FD+L RY+E
Sbjct: 1 MSLVLYNDLTRKKEPFVPLKDGEVGFYSCGPTVYDYFHIGNARPFIVFDVLRRYMEFSGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
VT+V+NFTDVDDK+I RAN++G L+ + +Y D L T+ PR ++H+E
Sbjct: 61 RVTFVQNFTDVDDKMINRANEMGITVQELAEKTIADYFEDADALGIKRATHYPRATEHIE 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I D++ ++ + AY V+G V+F V P YG+LS Q +E ++G R+ V+S KRNP D
Sbjct: 121 EIIDLVKRLEESGHAYEVDGVVYFDVSSFPEYGKLSRQNIEELQSGSRIEVNSSKRNPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKA K GEP+WDSPWG GRPGWHIECSAM+ YL + DIH GG DL FPHHENEIA
Sbjct: 181 FVLWKAQKPGEPAWDSPWGKGRPGWHIECSAMAMKYLGNTLDIHSGGTDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ AA ++ V YW+HN ++ + EKMSKSLGNF T R+ + Y PLA+R F++SAHYRS
Sbjct: 241 QAEAATEEVFVRYWLHNEYILIDKEKMSKSLGNFMTAREARKHYSPLAIRMFMLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED----CINKLRDE 372
P+N+ L A+ A+ + L +C S F+ + R + +D I + RD+
Sbjct: 301 PVNFGPEGLQQATAAL----ERLHNC---WSDFR-YAADNRPHSQGQDDIVESIKRHRDD 352
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F A M DD NT+ + F+ A+ +N L K E ++ IE+ ++V
Sbjct: 353 FVAAMDDDFNTAGAIGHIFE-AVSTVNGHL--------KGNDSLSSEGIKAIEDFFRDVD 403
Query: 433 RILGLL 438
I+GL+
Sbjct: 404 SIMGLI 409
>gi|197263729|ref|ZP_03163803.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197241984|gb|EDY24604.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
Length = 461
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWSSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + +P AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFN 351
>gi|52424677|ref|YP_087814.1| cysteinyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
gi|52306729|gb|AAU37229.1| CysS protein [Mannheimia succiniciproducens MBEL55E]
Length = 476
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 200/422 (47%), Positives = 250/422 (59%), Gaps = 32/422 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE F PI KVGMYVCGVT YDL H GH R VSFD++ RYL +L ++
Sbjct: 20 LKIFNTLTREKEEFKPINPNKVGMYVCGVTVYDLCHFGHGRTFVSFDVITRYLRYLGYDL 79
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L R E D L L P +PR + H+ +I
Sbjct: 80 RYVRNITDVDDKIIKRALENNETCDQLVERMIAEMHKDFDALNILRPDVEPRATKHIPEI 139
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ +I AYV E GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 140 IAMVETLIRRGHAYVAEDGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 199
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 200 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNDKELGNHFDIHGGGSDLMFPHHENEIAQ 259
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T N EKMSKSL NFFTIR I +Y ++R+F ++A YRS
Sbjct: 260 SCCAHDGEYVNYWLHTGMLTINEEKMSKSLNNFFTIRDILTKYDAESVRYFFLTAQYRSL 319
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS + A A+ +Y L+ CE P AED + +F M
Sbjct: 320 LDYSEENIGLARKALERLYTALRGCETVEIP-------------AED---QYVIDFKTAM 363
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ A +N LK + Q K QL+ + +K++ +LG
Sbjct: 364 DDDFNTPGALAVLFELA-----REINKLKTEDQTKANQLA---------SRLKQLAGVLG 409
Query: 437 LL 438
LL
Sbjct: 410 LL 411
>gi|421838079|ref|ZP_16272066.1| cysteinyl-tRNA ligase [Clostridium botulinum CFSAN001627]
gi|409739613|gb|EKN40247.1| cysteinyl-tRNA ligase [Clostridium botulinum CFSAN001627]
Length = 465
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 174/404 (43%), Positives = 257/404 (63%), Gaps = 4/404 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T +KE F +V G+V MYVCG T Y+ H+G+AR V FD + RYLE+ +V
Sbjct: 1 MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I+RAN+ G L +R+ +EY D DL T PR ++ ME+I
Sbjct: 61 KFIQNFTDIDDKMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ +I AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA
Sbjct: 121 IKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K GEP+W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS
Sbjct: 181 IWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +
Sbjct: 241 EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARM 377
N+S+ LDS A+ +Y ++ + E L + E + + E + K ++++ +M
Sbjct: 301 NFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
DD NT+ ++ F D ++ +N+++ + K+ + L LI L
Sbjct: 359 DDDFNTADAISVIF-DLIRDVNTNVTIESSKELVKYTLDLIREL 401
>gi|398791993|ref|ZP_10552691.1| cysteinyl-tRNA synthetase [Pantoea sp. YR343]
gi|398214125|gb|EJN00708.1| cysteinyl-tRNA synthetase [Pantoea sp. YR343]
Length = 461
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 254/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI G++GMYVCG+T YDL H+GH R V+FD++ RYL ++ ++
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGQIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYMGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN GE+ +L+NR E D A L LPP +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANQNGESIETLTNRMIAEMHKDFAALGILPPDLEPRATRHIDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +I + AYV + GDV F V +YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELVGTLIERNHAYVADNGDVMFDVLSDKDYGALSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KA EP+W+SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 VLWKMSKADEPAWNSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDREKMSKSLDNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY L+ A A+ +Y L+ + + AR F M
Sbjct: 302 LNYGEDNLNQARAALERLYTALRHTDANATAAGGEEFEAR---------------FRLAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N L K + K +L LR+I N +LG+
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRL-KTEDKTSADALAAKLRQIAN-------VLGI 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|410454410|ref|ZP_11308349.1| cysteinyl-tRNA synthetase [Bacillus bataviensis LMG 21833]
gi|409932225|gb|EKN69192.1| cysteinyl-tRNA synthetase [Bacillus bataviensis LMG 21833]
Length = 465
Score = 363 bits (933), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 185/424 (43%), Positives = 263/424 (62%), Gaps = 19/424 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ ++IYN++T++KE F P+ GKV MYVCG T Y+ H+G+AR A+ FD + RYLE+
Sbjct: 1 MAIQIYNTLTRKKEAFIPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYLEYRDF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V YV NFTDVDDK+IR AN LGE+ ++++R+ Y D++ L C PRV ++M+
Sbjct: 61 AVQYVSNFTDVDDKLIRAANQLGEDVPTIADRFINAYFEDVSALGCEKADVHPRVMENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I D I +++ D AY EGDV+F + YG+LS Q +++ + G R+ V +K++ D
Sbjct: 121 IIVDFIQKLVEKDFAYESEGDVYFRTRRFDEYGKLSHQSIDDLQVGARIEVGDKKQDDLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE WDSPWGPGRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWDSPWGPGRPGWHIECSAMAKKYLGETIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A YWMHNG++ +NEKMSKSLGNF + I +R++P LR F++S HYR+
Sbjct: 241 QSEALSGKLFSRYWMHNGYINIDNEKMSKSLGNFVLVHDIIKRHNPQVLRFFMLSVHYRN 300
Query: 317 PLNYSVLQLD---SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+NYS L+ +A + + YQ L+ + A + ++ N D I L+ F
Sbjct: 301 PINYSEELLENTKAAYERLTTSYQNLKHRKEASTDLTDN------NQEWLDKIAALQGSF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT+ ++ F+ + + ++ +L+K + IE + N+ +E+ R
Sbjct: 355 VEAMDDDFNTALAISVLFELSKQ---ANYYLLEKN-------TAIEVIDAFTNQFEELFR 404
Query: 434 ILGL 437
+LGL
Sbjct: 405 VLGL 408
>gi|386033536|ref|YP_005953449.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae KCTC 2242]
gi|424829340|ref|ZP_18254068.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|424934716|ref|ZP_18353088.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|339760664|gb|AEJ96884.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae KCTC 2242]
gi|407808903|gb|EKF80154.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|414706759|emb|CCN28463.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
Length = 461
Score = 363 bits (933), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 228/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + + AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSADAAGGEAFEARFIEAMDDDFN 351
>gi|240949657|ref|ZP_04753992.1| cysteinyl-tRNA synthetase [Actinobacillus minor NM305]
gi|240295915|gb|EER46591.1| cysteinyl-tRNA synthetase [Actinobacillus minor NM305]
Length = 459
Score = 363 bits (933), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 198/422 (46%), Positives = 249/422 (59%), Gaps = 31/422 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI ++GMYVCGVT YDL H GH R VSFD++ RYL + V
Sbjct: 2 LKIYNTLKREKEEFKPINPNQIGMYVCGVTVYDLCHFGHGRTFVSFDVIVRYLRYSGYNV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D L L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENKETCDQLVDRMIAEMHKDFDALNILRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV E GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAEDGDVMFDVESFKQYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T + EKMSKSLGNFF+IR + Y +LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YSV LD A A+ +Y L+ C+V+ A + + F M
Sbjct: 302 LDYSVENLDLARSALERLYTALRGCDVS---------------GAAEGGEHYVEAFKTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ I LN LK + K L++ +KE+ +LG
Sbjct: 347 DDDFNTPGALAVLFE-----IARELNKLKTEDMAKANGLAV---------RLKELAGVLG 392
Query: 437 LL 438
LL
Sbjct: 393 LL 394
>gi|170754736|ref|YP_001783143.1| cysteinyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
gi|429246816|ref|ZP_19210112.1| cysteinyl-tRNA ligase [Clostridium botulinum CFSAN001628]
gi|229558626|sp|B1IGH6.1|SYC_CLOBK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169119948|gb|ACA43784.1| cysteinyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
gi|428756150|gb|EKX78726.1| cysteinyl-tRNA ligase [Clostridium botulinum CFSAN001628]
Length = 465
Score = 363 bits (933), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 174/404 (43%), Positives = 257/404 (63%), Gaps = 4/404 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T +KE F +V G+V MYVCG T Y+ H+G+AR V FD + RYLE+ +V
Sbjct: 1 MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I+RAN+ G L +R+ +EY D DL T PR ++ ME+I
Sbjct: 61 KFIQNFTDIDDKMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ +I AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA
Sbjct: 121 IKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K GEP+W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS
Sbjct: 181 IWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +
Sbjct: 241 EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARM 377
N+S+ LDS A+ +Y ++ + E L + E + + E + K ++++ +M
Sbjct: 301 NFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
DD NT+ ++ F D ++ +N+++ + K+ + L LI L
Sbjct: 359 DDDFNTADAISVIF-DLIRDVNTNVTIESSKELVKYTLDLIREL 401
>gi|204930486|ref|ZP_03221416.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|452121220|ref|YP_007471468.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|204320420|gb|EDZ05623.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|451910224|gb|AGF82030.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 461
Score = 363 bits (933), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + +P AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFN 351
>gi|118595239|ref|ZP_01552586.1| cysteinyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
gi|118441017|gb|EAV47644.1| cysteinyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
Length = 456
Score = 363 bits (933), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 193/418 (46%), Positives = 253/418 (60%), Gaps = 23/418 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K++NS++++KE+F IV G+V MYVCG+T YD HLGHAR + FDL+YR+ + EV
Sbjct: 2 IKLFNSLSKKKEIFKSIVPGQVKMYVCGMTVYDFCHLGHARVLIVFDLIYRWFKASGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + G L+ ++ E D L + P +P+ ++ ++ +
Sbjct: 62 TYVRNITDIDDKIITRAAEQGVTYGVLTKQFIDEMNADAEALGVISPDAEPKATESIDAM 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I AYV DVF+AV K YG+LSG+ LE+ RAG RV VD K+N DF
Sbjct: 122 IIMIQGLIEKGYAYVGSNNDVFYAVSKFNGYGKLSGKSLEDLRAGNRVEVDKFKKNSFDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK+AK GEP W+SPWG GRPGWHIECSAMS +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKSAKPGEPCWNSPWGKGRPGWHIECSAMSNKFLGKNFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCA--ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
S A CQ +N YW+HNG V +NEKMSKSLGNFFTIR+I Y P +R F++ A YR
Sbjct: 242 SEAFNGCQMAN--YWLHNGFVKVDNEKMSKSLGNFFTIREILNHYEPEIVRFFVLKAQYR 299
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPLNYS L+ A + +Y ++ G RI+ D N +F
Sbjct: 300 SPLNYSDTHLEDAKQGLTRLYLAIR------------GNDTRIDQEI-DWKNNFASQFKD 346
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
+ DD NTS ++ F A + +N + Q KQ + L L +E + + LR
Sbjct: 347 ALDDDFNTSEAISILFSLA-----NEVNKSNQDQEKQLLIQLANILGILEMDPELFLR 399
>gi|238898628|ref|YP_002924309.1| cysteinyl-tRNA synthetase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|259511836|sp|C4K6G8.1|SYC_HAMD5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229466387|gb|ACQ68161.1| cysteinyl-tRNA synthetase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 461
Score = 363 bits (933), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 193/407 (47%), Positives = 250/407 (61%), Gaps = 22/407 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+ ++KELFTPI VGMYVCGVT YDL H+GHAR V FD++ RYL +L +
Sbjct: 2 LKIFNTFNRKKELFTPIHPNTVGMYVCGVTIYDLCHIGHARTFVVFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA+ ++ +L+ + +E D +L L P +PR ++H+ ++
Sbjct: 62 TYVRNITDIDDKIIQRASQNHQSCEALTAQMLKEMYRDFDELNLLRPDLEPRATEHITEM 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ Q+++ AYV GDV F+VEK+P+YG LS Q LE +AG RV V K +P DF
Sbjct: 122 ITLTQQLLDQKYAYVAANGDVLFSVEKNPHYGLLSRQNLEQLQAGARVEVMESKHHPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EP W SPWG GRPGWHIECSAM+A L FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 VLWKMSKPNEPHWPSPWGEGRPGWHIECSAMNAKALGPHFDIHGGGADLMFPHHENEMAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMH+G + N EKMSKSL NF TIR + +RY P LR+FL+SAHYRSP
Sbjct: 242 SICAHKAPYVNCWMHSGMIMINKEKMSKSLNNFCTIRDLLQRYDPETLRYFLLSAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ +Y L+D F E G++ F + M
Sbjct: 302 LNYTEENLKQARIALTRLYTALRDTNQ--KAFPEGGES-------------FEKRFVSAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 424
+DD NT F A +N LKK+ PK L LRK+
Sbjct: 347 NDDFNTPEAYAVLFDTA-----REINKLKKEHPKAAD-GLAAQLRKM 387
>gi|312898320|ref|ZP_07757710.1| cysteinyl-tRNA synthetase [Megasphaera micronuciformis F0359]
gi|310620239|gb|EFQ03809.1| cysteinyl-tRNA synthetase [Megasphaera micronuciformis F0359]
Length = 482
Score = 363 bits (933), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 188/421 (44%), Positives = 262/421 (62%), Gaps = 8/421 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN+++++KE F P+ G+V MYVCG+T Y+ SH+G+AR V++D++ RYL+HL V
Sbjct: 5 LTVYNTLSRKKEAFKPVTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLKHLGYAV 64
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+++NFTDVDDKII AN + +++NRY Y M L PRVS+HM+ I
Sbjct: 65 THIQNFTDVDDKIINAANGEEVSWDTIANRYIASYFEVMDKLHIQRADKYPRVSEHMDDI 124
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI+++I N AY ++GDV++ V+ +YG LS + L++ AG R+ VD RK NP DFA
Sbjct: 125 IAMISKLIENGHAYELDGDVYYRVQSFEHYGELSHRSLDDMMAGARIEVDDRKENPMDFA 184
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK EPSWDSPWG GRPGWHIECSAMS YL FD HGGG DLIFPHHENEIAQ+
Sbjct: 185 LWKAAKPSEPSWDSPWGKGRPGWHIECSAMSLKYLGEPFDFHGGGSDLIFPHHENEIAQT 244
Query: 259 CAACQDS-NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
A C V+YW+HNG +T ++EKMSKSL NFF ++ + E Y P ALR+FLIS HYRSP
Sbjct: 245 EACCNHGPMVNYWVHNGFITIDSEKMSKSLNNFFLVKDVLEHYSPDALRYFLISNHYRSP 304
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L++S +L + ++ + + + L Q G + ++ A + ++F M
Sbjct: 305 LDFSDERLTEMTRSLERLGTAIDNTLWLLE--QPSGGKSELSAALLADAQRTMEDFETAM 362
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ F+ A K + + P + L +++ K + ILG+
Sbjct: 363 CDDFNTALASAAMFELAKKVNIYTSEVSTNGVPADSAV-----LSEVKRIFKTMTDILGV 417
Query: 438 L 438
L
Sbjct: 418 L 418
>gi|16759512|ref|NP_455129.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142716|ref|NP_806058.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56414312|ref|YP_151387.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161615258|ref|YP_001589223.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|168239036|ref|ZP_02664094.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168240371|ref|ZP_02665303.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168465640|ref|ZP_02699522.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194442819|ref|YP_002039781.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194451708|ref|YP_002044570.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194734068|ref|YP_002113550.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197363232|ref|YP_002142869.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198241911|ref|YP_002214492.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389934|ref|ZP_03216545.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|213162267|ref|ZP_03347977.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213423442|ref|ZP_03356426.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213427916|ref|ZP_03360666.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213586100|ref|ZP_03367926.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213617481|ref|ZP_03372307.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213647061|ref|ZP_03377114.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|289823986|ref|ZP_06543585.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|375117973|ref|ZP_09763140.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|378960494|ref|YP_005217980.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|386590471|ref|YP_006086871.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|416424774|ref|ZP_11691955.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|416432900|ref|ZP_11696505.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|416440170|ref|ZP_11700751.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|416444471|ref|ZP_11703704.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|416453677|ref|ZP_11709751.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|416458657|ref|ZP_11713176.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|416465692|ref|ZP_11717014.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|416478343|ref|ZP_11721707.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|416490174|ref|ZP_11726680.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|416501486|ref|ZP_11732076.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|416542410|ref|ZP_11751580.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|416576758|ref|ZP_11769340.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|416583650|ref|ZP_11773406.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|416594999|ref|ZP_11780813.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|416596677|ref|ZP_11781569.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|416605824|ref|ZP_11787256.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|416614650|ref|ZP_11792902.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|416623468|ref|ZP_11797443.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|416633974|ref|ZP_11802255.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|416638936|ref|ZP_11804235.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|416648571|ref|ZP_11809216.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416670853|ref|ZP_11820342.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|416681864|ref|ZP_11823863.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|416693733|ref|ZP_11826833.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|416706889|ref|ZP_11832078.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|416713303|ref|ZP_11836945.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|416719366|ref|ZP_11841222.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|416723502|ref|ZP_11844168.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|416733637|ref|ZP_11850598.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416739762|ref|ZP_11853992.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416745200|ref|ZP_11857132.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416757240|ref|ZP_11863070.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|416764316|ref|ZP_11867920.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416766726|ref|ZP_11869342.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|418485343|ref|ZP_13054327.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|418491010|ref|ZP_13057539.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418493088|ref|ZP_13059556.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418498170|ref|ZP_13064585.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418504464|ref|ZP_13070822.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418507905|ref|ZP_13074213.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418525684|ref|ZP_13091664.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|418763106|ref|ZP_13319230.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418766639|ref|ZP_13322711.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418771811|ref|ZP_13327817.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418774939|ref|ZP_13330900.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418781109|ref|ZP_13336994.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418784571|ref|ZP_13340408.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418788084|ref|ZP_13343882.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|418793959|ref|ZP_13349685.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|418799466|ref|ZP_13355132.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|418804829|ref|ZP_13360433.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|418807689|ref|ZP_13363247.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418812228|ref|ZP_13367752.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418815587|ref|ZP_13371088.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418821233|ref|ZP_13376658.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418828661|ref|ZP_13383682.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|418831865|ref|ZP_13386815.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418835867|ref|ZP_13390758.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|418838852|ref|ZP_13393694.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418844306|ref|ZP_13399098.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|418854017|ref|ZP_13408701.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|418860895|ref|ZP_13415470.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|418864745|ref|ZP_13419269.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|418866398|ref|ZP_13420861.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|419727697|ref|ZP_14254665.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419734001|ref|ZP_14260896.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419739729|ref|ZP_14266473.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419745923|ref|ZP_14272533.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419749653|ref|ZP_14276132.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|419788833|ref|ZP_14314516.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419793876|ref|ZP_14319492.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|421570132|ref|ZP_16015825.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421577364|ref|ZP_16022952.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421581953|ref|ZP_16027494.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421584647|ref|ZP_16030155.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|445144283|ref|ZP_21387032.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|445150875|ref|ZP_21389941.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|21264006|sp|Q8Z8P6.1|SYC_SALTI RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|61216133|sp|Q5PCE2.1|SYC_SALPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187631630|sp|A9MW31.1|SYC_SALPB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226710850|sp|B5FLP7.1|SYC_SALDC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558785|sp|B4TA89.1|SYC_SALHS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558786|sp|B4SXP2.1|SYC_SALNS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558787|sp|B5BCZ8.1|SYC_SALPK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558788|sp|B4TN59.1|SYC_SALSV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|25293235|pir||AC0569 cysteinyl-tRNA synthetase [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16501804|emb|CAD05021.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138347|gb|AAO69918.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56128569|gb|AAV78075.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161364622|gb|ABX68390.1| hypothetical protein SPAB_03027 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194401482|gb|ACF61704.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194410012|gb|ACF70231.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194709570|gb|ACF88791.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195631983|gb|EDX50503.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197094709|emb|CAR60239.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197288172|gb|EDY27557.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197936427|gb|ACH73760.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199602379|gb|EDZ00925.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205339820|gb|EDZ26584.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|322614796|gb|EFY11725.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618903|gb|EFY15791.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322623610|gb|EFY20449.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322629091|gb|EFY25870.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631812|gb|EFY28566.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322637451|gb|EFY34153.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642135|gb|EFY38745.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322645840|gb|EFY42361.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322649781|gb|EFY46206.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322653205|gb|EFY49538.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322660646|gb|EFY56882.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322664798|gb|EFY60991.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322669149|gb|EFY65299.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322670695|gb|EFY66828.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322679067|gb|EFY75122.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682094|gb|EFY78119.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322685076|gb|EFY81073.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323193031|gb|EFZ78254.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196887|gb|EFZ82029.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323203872|gb|EFZ88889.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323214431|gb|EFZ99182.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323220129|gb|EGA04593.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323226317|gb|EGA10529.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323230246|gb|EGA14366.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323233984|gb|EGA18073.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323238322|gb|EGA22380.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244009|gb|EGA28018.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323246597|gb|EGA30571.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252160|gb|EGA36017.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323257792|gb|EGA41471.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261192|gb|EGA44784.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323264876|gb|EGA48375.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323272440|gb|EGA55847.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|326622240|gb|EGE28585.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|366056321|gb|EHN20647.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|366063705|gb|EHN27918.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366065263|gb|EHN29453.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366071306|gb|EHN35406.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366073947|gb|EHN38011.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366080211|gb|EHN44183.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366829565|gb|EHN56441.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372206453|gb|EHP19957.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|374354366|gb|AEZ46127.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|381297904|gb|EIC38988.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381299188|gb|EIC40262.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381301279|gb|EIC42335.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381304571|gb|EIC45546.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|381310809|gb|EIC51635.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|383797515|gb|AFH44597.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|392615966|gb|EIW98401.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392616299|gb|EIW98732.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392733386|gb|EIZ90588.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392734350|gb|EIZ91532.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392736650|gb|EIZ93812.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392747836|gb|EJA04827.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392750139|gb|EJA07115.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392754102|gb|EJA11021.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392763639|gb|EJA20446.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|392763784|gb|EJA20590.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|392764542|gb|EJA21341.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|392769858|gb|EJA26587.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|392776968|gb|EJA33654.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392778952|gb|EJA35623.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392789424|gb|EJA45943.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|392790828|gb|EJA47321.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392792039|gb|EJA48507.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392798762|gb|EJA55033.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392803142|gb|EJA59343.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392814678|gb|EJA70629.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392815126|gb|EJA71070.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392825524|gb|EJA81264.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|392826279|gb|EJA82012.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|392829863|gb|EJA85523.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|392840308|gb|EJA95844.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|402515390|gb|EJW22804.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402515952|gb|EJW23365.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402525289|gb|EJW32579.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402531165|gb|EJW38378.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|444847423|gb|ELX72573.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|444856380|gb|ELX81413.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
Length = 461
Score = 363 bits (933), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + +P AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFN 351
>gi|329906071|ref|ZP_08274354.1| Cysteinyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
gi|327547346|gb|EGF32177.1| Cysteinyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
Length = 464
Score = 363 bits (933), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 191/388 (49%), Positives = 246/388 (63%), Gaps = 19/388 (4%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+LKIYN++ ++K+LFTP+V G+ MYVCG+T YD H+GH R ++FD++YR+L+
Sbjct: 3 SLKIYNTLAREKQLFTPMVAGEARMYVCGMTIYDYCHIGHGRMMMAFDVVYRWLQVSGYS 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKIIRRA + E+ SL+ R+ D A L LPPT+ PR + ++ Q
Sbjct: 63 VTYVRNITDIDDKIIRRAVENKESISSLTERFIDAMAYDTAALGILPPTHAPRATRYVPQ 122
Query: 138 IKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ +MIT++ AY + GDV ++V P YG+LSG+ L++ RAGERV V++ KR+P D
Sbjct: 123 MLNMITRLQEKGLAYQGDDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWKAAK EP W SPWG GRPGWHIECSAM+ L +FDIHGGG DL FPHHEN
Sbjct: 183 FVLWKAAKDSEPEDAKWASPWGHGRPGWHIECSAMACALLGEQFDIHGGGTDLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A +YW+HNGHV +NEKMSKSL NFF IR + +Y LR F++ AH
Sbjct: 243 EIAQSEGANDKPFANYWLHNGHVRIDNEKMSKSLDNFFLIRDVLAKYDAEVLRFFILRAH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSPLNYS LD A A+ +Y L+D ++P +E A P F
Sbjct: 303 YRSPLNYSDTHLDDARVALTRLYTALKD----VAPSEEELDWASPYP----------QRF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSS 401
M DD NT L F A + IN S
Sbjct: 349 AEAMDDDFNTPLALAVLFDLATE-INRS 375
>gi|300996966|ref|ZP_07181604.1| cysteinyl-tRNA synthetase [Escherichia coli MS 200-1]
gi|300304371|gb|EFJ58891.1| cysteinyl-tRNA synthetase [Escherichia coli MS 200-1]
Length = 461
Score = 363 bits (933), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+D+KII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDEKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|148381443|ref|YP_001255984.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
gi|153933894|ref|YP_001385818.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
gi|153937063|ref|YP_001389225.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. Hall]
gi|187629799|sp|A7FZ91.1|SYC_CLOB1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187629801|sp|A5I7M8.1|SYC_CLOBH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148290927|emb|CAL85063.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
gi|152929938|gb|ABS35438.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
gi|152932977|gb|ABS38476.1| cysteine--tRNA ligase [Clostridium botulinum A str. Hall]
Length = 465
Score = 363 bits (933), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 174/404 (43%), Positives = 257/404 (63%), Gaps = 4/404 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T +KE F +V G+V MYVCG T Y+ H+G+AR V FD + RYLE+ +V
Sbjct: 1 MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I+RAN+ G L +R+ +EY D DL T PR ++ ME+I
Sbjct: 61 KFIQNFTDIDDKMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ +I AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA
Sbjct: 121 IKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K GEP+W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS
Sbjct: 181 IWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +
Sbjct: 241 EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARM 377
N+S+ LDS A+ +Y ++ + E L + E + + E + K ++++ +M
Sbjct: 301 NFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
DD NT+ ++ F D ++ +N+++ + K+ + L LI L
Sbjct: 359 DDDFNTADAISIIF-DLIRDVNTNVTIESSKELVKYTLDLIREL 401
>gi|187734096|ref|YP_001879221.1| cysteinyl-tRNA synthetase [Shigella boydii CDC 3083-94]
gi|416269156|ref|ZP_11642364.1| Cysteinyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
gi|416295501|ref|ZP_11651200.1| Cysteinyl-tRNA synthetase [Shigella flexneri CDC 796-83]
gi|417680511|ref|ZP_12329896.1| cysteinyl-tRNA synthetase [Shigella boydii 3594-74]
gi|420324132|ref|ZP_14825918.1| cysteinyl-tRNA synthetase [Shigella flexneri CCH060]
gi|420334694|ref|ZP_14836316.1| cysteinyl-tRNA synthetase [Shigella flexneri K-315]
gi|420351298|ref|ZP_14852496.1| cysteinyl-tRNA synthetase [Shigella boydii 4444-74]
gi|421681218|ref|ZP_16121048.1| cysteinyl-tRNA synthetase [Shigella flexneri 1485-80]
gi|229558790|sp|B2TTB3.1|SYC_SHIB3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187431088|gb|ACD10362.1| cysteinyl tRNA synthetase [Shigella boydii CDC 3083-94]
gi|320174878|gb|EFW49998.1| Cysteinyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
gi|320186200|gb|EFW60940.1| Cysteinyl-tRNA synthetase [Shigella flexneri CDC 796-83]
gi|332098469|gb|EGJ03435.1| cysteinyl-tRNA synthetase [Shigella boydii 3594-74]
gi|391257022|gb|EIQ16144.1| cysteinyl-tRNA synthetase [Shigella flexneri CCH060]
gi|391268385|gb|EIQ27313.1| cysteinyl-tRNA synthetase [Shigella flexneri K-315]
gi|391288622|gb|EIQ47122.1| cysteinyl-tRNA synthetase [Shigella boydii 4444-74]
gi|404341966|gb|EJZ68368.1| cysteinyl-tRNA synthetase [Shigella flexneri 1485-80]
Length = 461
Score = 363 bits (933), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 228/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQTRAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|257464496|ref|ZP_05628867.1| cysteinyl-tRNA synthetase [Actinobacillus minor 202]
gi|257450156|gb|EEV24199.1| cysteinyl-tRNA synthetase [Actinobacillus minor 202]
Length = 459
Score = 363 bits (933), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 201/425 (47%), Positives = 251/425 (59%), Gaps = 37/425 (8%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI ++GMYVCGVT YDL H GH R VSFD++ RYL + V
Sbjct: 2 LKIYNTLKREKEEFKPINPNQIGMYVCGVTVYDLCHFGHGRTFVSFDVIVRYLRYSGYNV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D L L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENKETCDQLVDRMIAEMHKDFDALNILRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV E GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 IAMVEKLIANGHAYVAEDGDVMFDVESFKQYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T + EKMSKSLGNFF+IR + Y +LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVA-LSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
L+YSV LD A A+ +Y +L+ C+V+ ++ EH A F
Sbjct: 302 LDYSVENLDLARSALERLYTSLRGCDVSGVAEGGEHYVEA----------------FKTA 345
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN---EVKEVLR 433
M DD NT L F+ I LN LK IE + K +KE+
Sbjct: 346 MDDDFNTPGALAVLFE-----IARELNKLK-----------IEDMAKANGLAVRLKELAG 389
Query: 434 ILGLL 438
+LGLL
Sbjct: 390 VLGLL 394
>gi|168181842|ref|ZP_02616506.1| cysteine--tRNA ligase [Clostridium botulinum Bf]
gi|237796964|ref|YP_002864516.1| cysteinyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
gi|259511826|sp|C3KVS3.1|SYC_CLOB6 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|182674897|gb|EDT86858.1| cysteine--tRNA ligase [Clostridium botulinum Bf]
gi|229261308|gb|ACQ52341.1| cysteine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
Length = 465
Score = 363 bits (933), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 172/403 (42%), Positives = 255/403 (63%), Gaps = 2/403 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T +KE F P+V G+V MYVCG T Y+ H+G+AR V FD + RYLE+ +V
Sbjct: 1 MKVYNTLTNKKEEFLPLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I++AN+ G L +R+ +EY D DL T PR ++ M++I
Sbjct: 61 KFIQNFTDIDDKMIKKANEEGTTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ +I AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA
Sbjct: 121 IKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K EP+W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS
Sbjct: 181 IWKSQKPEEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +
Sbjct: 241 EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S+ LDS A+ +Y ++ + E L + G D + K ++++ +M
Sbjct: 301 NFSMELLDSTKAALDRLYNSINNLENLLDEVKNEGLRDE-ELKYRDELQKYKEKYIEKMD 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
DD NT+ ++ F D ++ +N+++ + K+ + L LI L
Sbjct: 360 DDFNTADAISVIF-DLIRDVNTNITIESSKELVKYALDLIREL 401
>gi|449472388|ref|XP_004153579.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 465
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 200/421 (47%), Positives = 254/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L +
Sbjct: 6 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 65
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 66 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIHEI 125
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F+V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 126 IEITQKLIERGHAYVADNGDVMFSVPTDPTYGALSRQDLDQLQAGARVDVVDVKRNPMDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KAGEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKMSKAGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 246 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ T R PAA + R F M
Sbjct: 306 LNYSEENLKQARAALERLYTALR-------------GTDRSVPAAGGEAFEAR--FVEVM 350
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +L LRK+ + +LGL
Sbjct: 351 NDDFNTPEAYSVLFDMA-----REVNRLKSEDMAAAN-ALASHLRKLSS-------VLGL 397
Query: 438 L 438
L
Sbjct: 398 L 398
>gi|170760749|ref|YP_001788843.1| cysteinyl-tRNA synthetase [Clostridium botulinum A3 str. Loch
Maree]
gi|229558627|sp|B1KTA5.1|SYC_CLOBM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169407738|gb|ACA56149.1| cysteine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
Length = 465
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 174/404 (43%), Positives = 256/404 (63%), Gaps = 4/404 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T +KE F +V G+V MYVCG T Y+ H+G+AR V FD + RYLE+ +V
Sbjct: 1 MKVYNTLTNKKEEFVTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I+RAN+ G L +R+ +EY D DL T PR ++ ME+I
Sbjct: 61 KFIQNFTDIDDKMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ +I AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA
Sbjct: 121 IKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGSRINVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK K GEP+W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS
Sbjct: 181 IWKNQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +
Sbjct: 241 EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARM 377
N+S+ LDS A+ +Y ++ + E L + E + + E + K ++++ +M
Sbjct: 301 NFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
DD NT+ ++ F D ++ +N+++ + K+ + L LI L
Sbjct: 359 DDDFNTADAISVIF-DLIRDVNTNVTIESSKELVKYTLDLIREL 401
>gi|325981668|ref|YP_004294070.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. AL212]
gi|325531187|gb|ADZ25908.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. AL212]
Length = 459
Score = 363 bits (932), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 182/366 (49%), Positives = 233/366 (63%), Gaps = 14/366 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+ ++K+ F PI GKV +YVCG+T YD HLGHAR V FD + R+ E V
Sbjct: 2 LKIYNSIAREKQDFVPITPGKVKLYVCGMTVYDYCHLGHARVLVVFDTVVRWFEANDFTV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E+ +L+ R+ Q D L PT++P + H++ +
Sbjct: 62 NYVRNITDIDDKIIKRAQENNESIEALTQRFIQAMNEDSVALGVSSPTHEPCATHHVKSM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI+ ++ + AY GDV+F+V P YG+LSG+ L + RAGERV +DS K++P DF
Sbjct: 122 IGMISTLVEKNLAYQAHNGDVYFSVHNFPGYGKLSGKSLNDLRAGERVDIDSSKKDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK+AK+GEP W+SPWGPGRPGWHIECSAM +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKSAKSGEPFWESPWGPGRPGWHIECSAMCEQFLGEHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMHNG V +NEKMSKSLGNFFT+R+I + Y P +R F++ AHYRSP
Sbjct: 242 SEGAHDHPFVNYWMHNGFVRVDNEKMSKSLGNFFTVREILKLYQPEVVRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A+ +Y L++ E I+ A D +F M
Sbjct: 302 LNYSDQHLKDTKLALDRLYIALKEVEP-------------ISVARVDWNYPYAQKFKRAM 348
Query: 378 SDDLNT 383
DD NT
Sbjct: 349 DDDFNT 354
>gi|227112835|ref|ZP_03826491.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 461
Score = 363 bits (932), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 197/425 (46%), Positives = 251/425 (59%), Gaps = 37/425 (8%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE L+ R E D L L P +PR + H+ I
Sbjct: 62 KYVRNVTDIDDKIIKRAIENGETSDQLTTRMIAEMHADFDALNILRPDAEPRATHHIADI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ +I AYV GDV F+V+ +P YG LS Q L+ +AG RV + KRNP DF
Sbjct: 122 IEMVETLIARRHAYVASNGDVMFSVDTAPGYGVLSRQDLDQLQAGARVEITEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A S V+YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS
Sbjct: 242 SSCAHDGSYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR- 376
LNYS L A A+ +Y L+ + +++ HG DEF AR
Sbjct: 302 LNYSEDNLKQARAALDRLYTALRGTDASVAA---HGG----------------DEFEARF 342
Query: 377 ---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT + F A +N L K + Q L +LRK+
Sbjct: 343 REAMDDDFNTPEAYSVLFDMA-----REVNRL-KTEDVQAANQLASALRKLSG------- 389
Query: 434 ILGLL 438
+LGLL
Sbjct: 390 VLGLL 394
>gi|82543006|ref|YP_406953.1| cysteinyl-tRNA synthetase [Shigella boydii Sb227]
gi|109894937|sp|Q324Y3.1|SYC_SHIBS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|81244417|gb|ABB65125.1| cysteine tRNA synthetase [Shigella boydii Sb227]
Length = 439
Score = 363 bits (932), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 228/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQTRAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|227329459|ref|ZP_03833483.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 461
Score = 363 bits (932), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 197/425 (46%), Positives = 251/425 (59%), Gaps = 37/425 (8%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE L+ R E D L L P +PR + H+ I
Sbjct: 62 KYVRNVTDIDDKIIKRAIENGETSDQLTTRMIAEMHADFDALNILRPDAEPRATHHIADI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ +I AYV GDV F+V+ +P YG LS Q L+ +AG RV + KRNP DF
Sbjct: 122 IEMVETLIARRHAYVASNGDVMFSVDTAPGYGVLSRQDLDQLQAGARVEITEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A S V+YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS
Sbjct: 242 SSCAHDGSYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR- 376
LNYS L A A+ +Y L+ + +++ HG DEF AR
Sbjct: 302 LNYSEDNLKQARAALDRLYTALRGTDASVAA---HGG----------------DEFEARF 342
Query: 377 ---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT + F A +N L K + Q L +LRK+
Sbjct: 343 REAMDDDFNTPEAYSVLFDMA-----REVNRL-KTEDVQAANQLASALRKLSG------- 389
Query: 434 ILGLL 438
+LGLL
Sbjct: 390 VLGLL 394
>gi|421493946|ref|ZP_15941299.1| CYSS [Morganella morganii subsp. morganii KT]
gi|455740332|ref|YP_007506598.1| Cysteinyl-tRNA synthetase [Morganella morganii subsp. morganii KT]
gi|400191717|gb|EJO24860.1| CYSS [Morganella morganii subsp. morganii KT]
gi|455421895|gb|AGG32225.1| Cysteinyl-tRNA synthetase [Morganella morganii subsp. morganii KT]
Length = 462
Score = 363 bits (932), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 253/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD + RYL H +V
Sbjct: 2 LKIYNTLSRQKEEFKPINPGKIGMYVCGITVYDLCHIGHGRTFVAFDTIVRYLRHAGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y+RN TDVDDKIIRRAN+ E L +R E D + + P +PR + H+++I
Sbjct: 62 NYIRNITDVDDKIIRRANENNETCDQLVDRMVAEMHRDFDAMNLMRPDSEPRATHHIKEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +++ AYV + GDV F + P YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEITQLLLDRGHAYVADNGDVMFDISSDPEYGLLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGAGRPGWHIECSAMNSKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y P +R+FL+SAHYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLGYYDPETVRYFLLSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ Y L+ + K A + E+ N+ RD M
Sbjct: 302 LNYTEENLKQARTALERFYTALRGTD----------KDAAV-VVNEEFANRFRDA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A LN LK++ + + + +++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----RELNRLKQED--------MTAANGLAAQLRQLAGVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|421560018|ref|ZP_16005883.1| cysteine--tRNA ligase [Neisseria meningitidis 92045]
gi|402334103|gb|EJU69397.1| cysteine--tRNA ligase [Neisseria meningitidis 92045]
Length = 473
Score = 363 bits (932), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 187/389 (48%), Positives = 238/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE FTPI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFTPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 ---NGYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|161504307|ref|YP_001571419.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:- str. RSK2980]
gi|187631629|sp|A9MLA7.1|SYC_SALAR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|160865654|gb|ABX22277.1| hypothetical protein SARI_02415 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 461
Score = 363 bits (932), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEITRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + +P AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFN 351
>gi|16763917|ref|NP_459532.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|62179146|ref|YP_215563.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|167990531|ref|ZP_02571631.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168231534|ref|ZP_02656592.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168261021|ref|ZP_02682994.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168818841|ref|ZP_02830841.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194472796|ref|ZP_03078780.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197251404|ref|YP_002145520.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205351838|ref|YP_002225639.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856015|ref|YP_002242666.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224582374|ref|YP_002636172.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238911333|ref|ZP_04655170.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|374978567|ref|ZP_09719909.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|375113462|ref|ZP_09758632.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|378444037|ref|YP_005231669.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|378448881|ref|YP_005236240.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378698497|ref|YP_005180454.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|378983142|ref|YP_005246297.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|378987939|ref|YP_005251103.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379699758|ref|YP_005241486.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383495343|ref|YP_005396032.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|409248984|ref|YP_006884821.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|421357672|ref|ZP_15807980.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421365334|ref|ZP_15815556.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421368891|ref|ZP_15819075.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421372340|ref|ZP_15822489.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421375950|ref|ZP_15826059.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421380522|ref|ZP_15830584.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421385971|ref|ZP_15835987.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421392385|ref|ZP_15842342.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421396099|ref|ZP_15846031.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421398756|ref|ZP_15848661.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421405061|ref|ZP_15854896.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421407663|ref|ZP_15857470.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421412003|ref|ZP_15861766.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421419352|ref|ZP_15869044.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421423972|ref|ZP_15873623.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421425728|ref|ZP_15875363.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421430073|ref|ZP_15879667.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421436902|ref|ZP_15886428.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421439275|ref|ZP_15888766.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421445950|ref|ZP_15895371.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421451097|ref|ZP_15900463.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|421884239|ref|ZP_16315454.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|422024672|ref|ZP_16371149.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422029698|ref|ZP_16375953.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427545987|ref|ZP_18926463.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427562223|ref|ZP_18931226.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427580807|ref|ZP_18936049.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427602934|ref|ZP_18940824.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427627657|ref|ZP_18945736.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427650961|ref|ZP_18950491.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427659909|ref|ZP_18955447.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427665020|ref|ZP_18960192.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|427700860|ref|ZP_18965144.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|436707351|ref|ZP_20518603.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|436797095|ref|ZP_20523041.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436810693|ref|ZP_20529731.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436813561|ref|ZP_20531749.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436831285|ref|ZP_20535953.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436849875|ref|ZP_20541012.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436856288|ref|ZP_20545393.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436863273|ref|ZP_20549816.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436871749|ref|ZP_20554923.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436878902|ref|ZP_20559321.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436887016|ref|ZP_20563422.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436894318|ref|ZP_20567796.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436904444|ref|ZP_20574461.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436910080|ref|ZP_20576665.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436918333|ref|ZP_20581504.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436925448|ref|ZP_20585880.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436934372|ref|ZP_20590376.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436941200|ref|ZP_20594760.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436949190|ref|ZP_20599204.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436959759|ref|ZP_20603956.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436975025|ref|ZP_20611301.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436987284|ref|ZP_20615928.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|436999822|ref|ZP_20620395.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437010139|ref|ZP_20624119.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437018063|ref|ZP_20626555.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437035651|ref|ZP_20633577.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437046499|ref|ZP_20638315.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437049250|ref|ZP_20639870.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437056937|ref|ZP_20644305.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437065389|ref|ZP_20649074.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437078832|ref|ZP_20656326.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437081856|ref|ZP_20657931.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437089880|ref|ZP_20662452.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437117255|ref|ZP_20669875.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437122452|ref|ZP_20672294.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|437132552|ref|ZP_20678002.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437137659|ref|ZP_20680454.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437148972|ref|ZP_20687845.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437152070|ref|ZP_20689741.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437161017|ref|ZP_20695090.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437172875|ref|ZP_20701398.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437175355|ref|ZP_20702818.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437188339|ref|ZP_20710343.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437201147|ref|ZP_20711796.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|437259799|ref|ZP_20717319.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437272811|ref|ZP_20724561.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437279181|ref|ZP_20727518.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437288448|ref|ZP_20730782.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437306917|ref|ZP_20734559.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437323656|ref|ZP_20739390.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437338327|ref|ZP_20743633.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437370524|ref|ZP_20749229.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437421767|ref|ZP_20755056.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437456365|ref|ZP_20760484.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437469912|ref|ZP_20764927.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437485370|ref|ZP_20769482.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437498954|ref|ZP_20773763.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437502455|ref|ZP_20774537.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437528684|ref|ZP_20780137.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437558041|ref|ZP_20785330.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437569191|ref|ZP_20787817.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437593166|ref|ZP_20795332.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437602273|ref|ZP_20798280.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437625451|ref|ZP_20805536.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437638451|ref|ZP_20807509.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|437658385|ref|ZP_20811592.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|437670670|ref|ZP_20815680.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437694697|ref|ZP_20821772.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437718071|ref|ZP_20828471.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437723537|ref|ZP_20829366.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|437811699|ref|ZP_20841291.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437868275|ref|ZP_20848257.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438091359|ref|ZP_20860870.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438105690|ref|ZP_20866308.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438114367|ref|ZP_20869983.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|440762064|ref|ZP_20941129.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|440768809|ref|ZP_20947773.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|440772397|ref|ZP_20951302.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|445136689|ref|ZP_21383553.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|445172421|ref|ZP_21396512.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|445218538|ref|ZP_21402566.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|445230753|ref|ZP_21405529.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445311497|ref|ZP_21411814.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|445324771|ref|ZP_21412334.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445343434|ref|ZP_21416903.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445354512|ref|ZP_21421411.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|21264009|sp|Q8ZR68.1|SYC_SALTY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|81309761|sp|Q57S29.1|SYC_SALCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226710849|sp|B5EYD7.1|SYC_SALA4 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226710851|sp|B5R6X0.1|SYC_SALG2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558784|sp|B5QUV0.1|SYC_SALEP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254781692|sp|C0PVI8.1|SYC_SALPC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|16419048|gb|AAL19491.1| cysteine tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|62126779|gb|AAX64482.1| cysteine tRNA synthetase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|194459160|gb|EDX47999.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197215107|gb|ACH52504.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205271619|emb|CAR36445.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205330830|gb|EDZ17594.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205333999|gb|EDZ20763.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205343946|gb|EDZ30710.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205349964|gb|EDZ36595.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206707818|emb|CAR32103.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224466901|gb|ACN44731.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261245816|emb|CBG23614.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992259|gb|ACY87144.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301157145|emb|CBW16629.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911570|dbj|BAJ35544.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320084812|emb|CBY94602.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321226119|gb|EFX51170.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322713608|gb|EFZ05179.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|323128857|gb|ADX16287.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|332987486|gb|AEF06469.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379985953|emb|CCF87727.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|380462164|gb|AFD57567.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|395980845|gb|EJH90068.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|395983186|gb|EJH92379.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395989909|gb|EJH99041.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395999990|gb|EJI09005.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|396003177|gb|EJI12165.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|396003571|gb|EJI12558.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396007946|gb|EJI16881.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396011143|gb|EJI20054.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396015454|gb|EJI24336.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396024372|gb|EJI33158.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396029595|gb|EJI38331.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396030546|gb|EJI39280.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396035492|gb|EJI44164.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396036020|gb|EJI44691.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396044251|gb|EJI52848.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396052222|gb|EJI60730.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396056999|gb|EJI65472.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396057390|gb|EJI65862.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396063852|gb|EJI72240.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|396064385|gb|EJI72772.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396071481|gb|EJI79806.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|414023396|gb|EKT06830.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414023540|gb|EKT06968.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414025083|gb|EKT08423.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414037278|gb|EKT20062.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414038392|gb|EKT21103.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414042477|gb|EKT25015.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414051626|gb|EKT33715.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414053052|gb|EKT35070.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414057250|gb|EKT39009.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414061693|gb|EKT43076.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|414067187|gb|EKT47591.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|434961167|gb|ELL54485.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434965185|gb|ELL58148.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434975069|gb|ELL67379.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434982242|gb|ELL74065.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434988452|gb|ELL80051.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434991721|gb|ELL83209.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434992461|gb|ELL83914.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|434997800|gb|ELL89039.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435000964|gb|ELL92086.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|435007578|gb|ELL98431.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435011548|gb|ELM02268.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435016966|gb|ELM07474.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435018132|gb|ELM08607.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435028453|gb|ELM18532.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435031065|gb|ELM21054.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435039841|gb|ELM29610.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435041512|gb|ELM31254.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435045031|gb|ELM34676.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435049976|gb|ELM39481.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435053888|gb|ELM43324.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435054424|gb|ELM43859.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435059865|gb|ELM49140.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435060363|gb|ELM49633.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435067039|gb|ELM56110.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435075018|gb|ELM63841.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435077969|gb|ELM66713.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435081655|gb|ELM70296.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435096455|gb|ELM84727.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435096788|gb|ELM85050.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435100037|gb|ELM88228.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435101188|gb|ELM89342.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435111024|gb|ELM98929.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435113627|gb|ELN01473.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435114898|gb|ELN02688.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435122099|gb|ELN09621.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435123278|gb|ELN10771.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|435130781|gb|ELN18009.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435134293|gb|ELN21421.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435143543|gb|ELN30409.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435143952|gb|ELN30806.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435146530|gb|ELN33323.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435156259|gb|ELN42761.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435157013|gb|ELN43480.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435165187|gb|ELN51247.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435168143|gb|ELN53996.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435171337|gb|ELN56973.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435183848|gb|ELN68809.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435186905|gb|ELN71718.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435194707|gb|ELN79135.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435196324|gb|ELN80667.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435200583|gb|ELN84568.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435206743|gb|ELN90245.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435207072|gb|ELN90564.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435214272|gb|ELN97095.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|435214797|gb|ELN97545.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435216545|gb|ELN99020.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435223877|gb|ELO05861.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435237883|gb|ELO18538.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435240193|gb|ELO20613.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435246239|gb|ELO26257.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435250670|gb|ELO30390.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435252427|gb|ELO31977.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435253270|gb|ELO32758.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435259961|gb|ELO39174.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435270384|gb|ELO48880.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|435278076|gb|ELO55951.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|435278277|gb|ELO56148.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435280876|gb|ELO58561.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435283923|gb|ELO61437.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435293849|gb|ELO70512.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|435298053|gb|ELO74310.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435315768|gb|ELO88988.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435321379|gb|ELO93794.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435328766|gb|ELP00224.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|435335378|gb|ELP05624.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|436416249|gb|ELP14158.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|436418881|gb|ELP16762.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|436424013|gb|ELP21801.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|444845036|gb|ELX70258.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444856300|gb|ELX81336.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|444860528|gb|ELX85443.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|444864127|gb|ELX88935.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444873428|gb|ELX97724.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|444881238|gb|ELY05282.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444882002|gb|ELY06002.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444887602|gb|ELY11295.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
Length = 461
Score = 363 bits (932), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + +P AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFN 351
>gi|437834270|ref|ZP_20844942.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|435301340|gb|ELO77373.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
Length = 461
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 178/350 (50%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P YG+LS Q LE +AG RV + KRNP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDIVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + +P AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFN 351
>gi|288818363|ref|YP_003432711.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|384129119|ref|YP_005511732.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|288787763|dbj|BAI69510.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|308751956|gb|ADO45439.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
Length = 490
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 182/428 (42%), Positives = 263/428 (61%), Gaps = 17/428 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++LKIYN+++ + E F P+ KV +Y CGVT YD SH+GH R+ + FD+ RYLEHL
Sbjct: 1 MSLKIYNTLSGKVEEFVPLNPPKVYIYTCGVTVYDDSHVGHGRSLIVFDVFRRYLEHLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V +VRNFTDVDDKII RA + + ++++NRY Y +DM ++ P +PRV++H++
Sbjct: 61 KVKFVRNFTDVDDKIINRAKEENTDFMTIANRYIASYYIDMESIKVKPADVEPRVTEHLQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I D+I ++ AY GDV+F+V+ P YG+LS + E G RV +KR+P D
Sbjct: 121 EIIDVIKGLVEKGYAYESGGDVYFSVKAFPEYGKLSKRSTEELEVGARVEPSEKKRDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+AKAGEP+W+SPWG GRPGWH EC AM +L DIHGGG+DL+FPHHENEIA
Sbjct: 181 FALWKSAKAGEPAWESPWGLGRPGWHTECVAMVFKHLGKTIDIHGGGLDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ A YWMHNG VT +KMSKSLGN+ T+R++ RYHP LR ++ HYRS
Sbjct: 241 QAEALTGKPFARYWMHNGLVTVGGQKMSKSLGNYVTLREVYRRYHPDVLRLLVLFTHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ--EHGKTARINPAAEDCINKLRDEFH 374
PL++S +++ A A I ++D ++ L Q E K +++ + + + + F
Sbjct: 301 PLDFSWEKMEEAKRAYERIRHAIEDLDM-LKNLQVVEENKISQLY----EKVKEAEEAFF 355
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR- 433
+S+D NT L+ F + L +K + ++++S + L E V +LR
Sbjct: 356 EDLSEDFNTPSALSHIFA-----LVGELGKVKSRAISERRISR-QDLSAYEFAVSSILRH 409
Query: 434 ---ILGLL 438
I GL
Sbjct: 410 MRGIFGLF 417
>gi|334123097|ref|ZP_08497127.1| cysteine--tRNA ligase [Enterobacter hormaechei ATCC 49162]
gi|333391213|gb|EGK62333.1| cysteine--tRNA ligase [Enterobacter hormaechei ATCC 49162]
Length = 461
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 200/421 (47%), Positives = 254/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L +
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F+V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEKLIERGHAYVADNGDVMFSVPTDPTYGALSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KAGEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKAGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ T R PAA + R F M
Sbjct: 302 LNYSEENLKQARAALERLYTALR-------------GTDRSVPAAGGEAFEAR--FVEVM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +L LRK+ + +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKSEDMAAAN-ALASHLRKLSS-------VLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|153940395|ref|YP_001392856.1| cysteinyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
gi|384463817|ref|YP_005676412.1| cysteine--tRNA ligase [Clostridium botulinum F str. 230613]
gi|187629802|sp|A7GJ96.1|SYC_CLOBL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|152936291|gb|ABS41789.1| cysteine--tRNA ligase [Clostridium botulinum F str. Langeland]
gi|295320834|gb|ADG01212.1| cysteine--tRNA ligase [Clostridium botulinum F str. 230613]
Length = 465
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 173/404 (42%), Positives = 257/404 (63%), Gaps = 4/404 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T +KE F +V G+V MYVCG T Y+ H+G+AR V FD + RYLE+ +V
Sbjct: 1 MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I+RAN+ G L +R+ +EY D DL T PR ++ ME+I
Sbjct: 61 KFIQNFTDIDDKMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ +I AY ++GDV+F+ +K +YG+LSGQ LE + G R+ +D RK++P DFA
Sbjct: 121 IKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINIDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K GEP+W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS
Sbjct: 181 IWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +
Sbjct: 241 EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARM 377
N+S+ LDS A+ +Y ++ + E L + E + + E + K ++++ +M
Sbjct: 301 NFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
DD NT+ ++ F D ++ +N+++ + K+ + L LI L
Sbjct: 359 DDDFNTADAISVIF-DLIRDVNTNVTIESSKELVKYTLDLIREL 401
>gi|325578800|ref|ZP_08148847.1| cysteine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
gi|325159624|gb|EGC71756.1| cysteine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
Length = 482
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 254/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI GKVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 25 LKIFNTLTREKEVFKPIHEGKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 84
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 85 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 144
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV GDV F VE YG+LS Q L+ +AG R+ ++ K+NP DF
Sbjct: 145 IEIVEKLIARGHAYVANNGDVMFDVESFKEYGKLSRQDLDQLQAGARIEINEIKKNPMDF 204
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 205 VLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 264
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSL NFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 265 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLSNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 324
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 325 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGENFVEAFREA----M 369
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + E + + E+ ILGL
Sbjct: 370 DDDFNTPNALSVLFEMA-----REINKLKTEDA--------EKANGLAARLCELAGILGL 416
Query: 438 L 438
L
Sbjct: 417 L 417
>gi|253681484|ref|ZP_04862281.1| cysteine--tRNA ligase [Clostridium botulinum D str. 1873]
gi|253561196|gb|EES90648.1| cysteine--tRNA ligase [Clostridium botulinum D str. 1873]
Length = 466
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 175/403 (43%), Positives = 251/403 (62%), Gaps = 2/403 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K++N+MT+QKE F PI G+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 1 MKLFNTMTRQKEEFKPIKDGEVSMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I++AN+ L +R+ EY D L T PR ++ M++I
Sbjct: 61 NFIQNFTDIDDKMIKKANEENVTVKELGDRFINEYYKDADGLNIKRATVNPRATEFMDEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +I+ AY V+GDV+F+ +K YG+LSGQ L++ +AG R+ VD RK++P DFA
Sbjct: 121 ISFVKDLIDKGYAYEVDGDVYFSTKKFAEYGKLSGQNLDDLQAGARITVDERKQDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK K GEPSW+SPWG GRPGWHIECS M+ L DIH GG DL+FPHHENEIAQS
Sbjct: 181 IWKNEKPGEPSWESPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A +YWMH+ ++ NN+KMSKSL NFFT R+I ERY +R F++SAHYR+PL
Sbjct: 241 EARNGKDFANYWMHSAYLNINNKKMSKSLNNFFTTREILERYDAEVIRLFMLSAHYRTPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+SA + +Y ++ + E L + T + +N ++++ +M
Sbjct: 301 NFSDELLESAKASNERLYNSIGNLERLLDEVKIEEMTG-VEKEYIKVLNSYKEKYIEKMD 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
DD NT+ + F D +K IN+ +N K+ L LI L
Sbjct: 360 DDFNTADAIAVIF-DLIKEINTHVNTDSSKELVNYSLELIREL 401
>gi|238785350|ref|ZP_04629338.1| Cysteinyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
gi|238713741|gb|EEQ05765.1| Cysteinyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
Length = 461
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 251/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENSETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I D AYV GDV FAV+ P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELVERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGAGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ + +P AR F A M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDANAAPAGGAEFEAR---------------FRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + I + + E++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKTED--------IAAANGLAAELRKLAHVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|418511935|ref|ZP_13078183.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366084252|gb|EHN48163.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
Length = 461
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + +P AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFN 351
>gi|259909186|ref|YP_002649542.1| cysteinyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
gi|387872139|ref|YP_005803519.1| cysteine tRNA synthetase [Erwinia pyrifoliae DSM 12163]
gi|224964808|emb|CAX56330.1| Cysteinyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
gi|283479232|emb|CAY75148.1| cysteine tRNA synthetase [Erwinia pyrifoliae DSM 12163]
Length = 462
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 177/351 (50%), Positives = 230/351 (65%), Gaps = 2/351 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI G +GMYVCG+T YDL H+GH R +FD++ RYL + ++
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGNIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ L+NR E D A L LPP +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESIERLTNRMIDEMHKDFAALNILPPDLEPRATRHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR-KRNPAD 196
+++ ++I + AYV GDV F+V+ P YG LS Q L+ +AG RV V + KRNP D
Sbjct: 122 IELVEKLITREHAYVASNGDVMFSVDSDPQYGSLSRQDLDQLQAGARVEVAADVKRNPMD 181
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +KA EP W SPWG GRPGWHIECSAM+ LS FDIHGGG DL+FPHHENEIA
Sbjct: 182 FVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLSEHFDIHGGGSDLMFPHHENEIA 241
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V+YWMH+G V + EKMSKSL NFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 QSTCAHDGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLQHYDAETVRYFLMSGHYRS 301
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNY L+ A A+ +Y L++ + +P AR A +D N
Sbjct: 302 QLNYGEDNLNQARSALERLYIALRNTDTRATPAGGEEFEARFREAMDDDFN 352
>gi|218767348|ref|YP_002341860.1| cysteinyl-tRNA synthetase [Neisseria meningitidis Z2491]
gi|34222758|sp|Q9JWJ3.1|SYC_NEIMA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|121051356|emb|CAM07647.1| cysteinyl-tRNA synthetase [Neisseria meningitidis Z2491]
Length = 699
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 239/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 469
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 470 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 530 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSEN----------- 578
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+N F+A M+DD T + F+
Sbjct: 579 --VNDYTRRFYAAMNDDFGTVEAVAVLFE 605
>gi|261364077|ref|ZP_05976960.1| cysteine--tRNA ligase [Neisseria mucosa ATCC 25996]
gi|288568121|gb|EFC89681.1| cysteine--tRNA ligase [Neisseria mucosa ATCC 25996]
Length = 473
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 187/389 (48%), Positives = 238/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE FTPI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|145589043|ref|YP_001155640.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|187629841|sp|A4SX62.1|SYC_POLSQ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145047449|gb|ABP34076.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 473
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 192/416 (46%), Positives = 252/416 (60%), Gaps = 33/416 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++++ K++F PIV GKV MYVCG+T YD H+GHAR + FD++ R+L EV
Sbjct: 2 LQIYNTLSRSKQVFKPIVPGKVKMYVCGMTVYDFCHIGHARVMIVFDMVVRWLRASGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E +L+NR+ D +L + P +PR +D+++Q+
Sbjct: 62 QYVRNITDIDDKIIKRALENSEPISALTNRFIAAMHADSDELGLMHPDQEPRATDYIQQM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ MI ++I N+ AY E GDV FAV P YG+LSG+ L+ AGERVA+ KR+P DF
Sbjct: 122 QGMIGKLIENELAYQGEDGDVNFAVRLLPRYGQLSGKTLDELNAGERVAIGGGKRDPLDF 181
Query: 198 ALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWK+AK EP+ W+SPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENE
Sbjct: 182 VLWKSAKPEEPADTRWNSPWGEGRPGWHIECSAMSCDLLGAHFDIHGGGADLQFPHHENE 241
Query: 255 IAQSCAACQDSN--------VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 306
IAQS A N V+YWMHNGH+ N EKMSKSLGNFF IR + + + P +R
Sbjct: 242 IAQSEGALYGQNRQENDAPFVNYWMHNGHIRVNEEKMSKSLGNFFLIRDVLKSFDPEVVR 301
Query: 307 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDC 365
F++ AHYRSP+NYS QL+ A + +Y L EV P D
Sbjct: 302 FFMLKAHYRSPINYSDAQLEEARSGLTRLYTALTHIPEVDTVPI--------------DL 347
Query: 366 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
N F M+DD NT + F + S +N + + KQ L++SL
Sbjct: 348 QNPWAKRFADAMNDDFNTPEAIAVLFD-----LASEVNRAQGAE-KQMLAGLLKSL 397
>gi|381394421|ref|ZP_09920138.1| cysteinyl-tRNA synthetase [Glaciecola punicea DSM 14233 = ACAM 611]
gi|379330023|dbj|GAB55271.1| cysteinyl-tRNA synthetase [Glaciecola punicea DSM 14233 = ACAM 611]
Length = 459
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 183/365 (50%), Positives = 227/365 (62%), Gaps = 15/365 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN+++++K+ FTPIV+ KVG+YVCG+T YDL H+GHAR +SFD++ RYL HL EV
Sbjct: 2 LQIYNTLSKEKQPFTPIVKNKVGLYVCGITVYDLCHMGHARTYLSFDIVLRYLRHLGFEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA E P L+ R E D A L L P +PRV+ HM +I
Sbjct: 62 KYVRNITDVDDKIIQRAQQNNETPGELTQRTITEMHADFAALNLLKPDVEPRVTTHMPEI 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++I+ AY GDV F V YG+LS Q L +G RV S K +P DF
Sbjct: 122 ITVIERLIDKGYAYQSSTGDVLFKVNAYEGYGKLSKQDLSQLVSGIRVQTTSDKHDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK K GE SW SPWG GRPGWHIECSAM+ +L FDIHGGG DLIFPHHENE+AQ
Sbjct: 182 ILWKGVKEGEISWASPWGEGRPGWHIECSAMNHKHLGEHFDIHGGGSDLIFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH G V NNEKMSKSL NFFT+R + E++ LR FL+SAHYRS
Sbjct: 242 SCCAYDTPYVNTWMHTGMVQINNEKMSKSLDNFFTLRSVLEKHDAETLRFFLMSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS +D A ++ Y +L+D + N E +F A M
Sbjct: 302 LSYSQENIDQARASLERFYTSLRDV--------------KANVDVEMSYGGYLAKFEAAM 347
Query: 378 SDDLN 382
+DD N
Sbjct: 348 NDDFN 352
>gi|397167255|ref|ZP_10490698.1| cysteine--tRNA ligase [Enterobacter radicincitans DSM 16656]
gi|396091401|gb|EJI88968.1| cysteine--tRNA ligase [Enterobacter radicincitans DSM 16656]
Length = 461
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 178/350 (50%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIVEMHKDFDALNILRPDSEPRATHHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +++ AYV + GDV F+V P YG+LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITERLLERGHAYVADNGDVMFSVPTDPTYGQLSRQDLDQLQAGARVEVAEIKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWQSPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + + AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDSTVPAEGGEAFEARFVEAMDDDFN 351
>gi|378956076|ref|YP_005213563.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|438120779|ref|ZP_20872025.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|357206687|gb|AET54733.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|434943402|gb|ELL49529.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
Length = 461
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + +P AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFN 351
>gi|169830402|ref|YP_001716384.1| cysteinyl-tRNA synthetase [Candidatus Desulforudis audaxviator
MP104C]
gi|229558630|sp|B1I0T1.1|SYC_DESAP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169637246|gb|ACA58752.1| cysteinyl-tRNA synthetase [Candidatus Desulforudis audaxviator
MP104C]
Length = 478
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 194/426 (45%), Positives = 258/426 (60%), Gaps = 20/426 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++I+N++T +KE F P G+V +YVCG T Y+ HLG+ARA V FD + RY + V
Sbjct: 1 MQIFNTLTGRKETFCPRDPGRVSIYVCGPTTYNFIHLGNARALVVFDTIRRYFLYKGYRV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y++NFTDVDDKII R+ + G +P +L+ +Y EY VD L P+VSDH+ +I
Sbjct: 61 LYIQNFTDVDDKIINRSREEGIDPQTLAAKYVDEYFVDADALNVRRADVHPKVSDHIPEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+IT II+ AYV GDV+FAV K YGRLS + L++ AG RV V +KR+P DFA
Sbjct: 121 IALITMIIDRGLAYVAGGDVYFAVRKFGGYGRLSKRSLDDLLAGARVEVGEQKRDPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAM+ YL + FDIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKAAKPGEPWWESPWGRGRPGWHIECSAMALKYLGTGFDIHGGGADLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YW+HNG +T EKMSKSLGN F +R++T Y P ALR FL+S HYR+PL
Sbjct: 241 EGATGEPFARYWIHNGFITIREEKMSKSLGNVFLVRELTRLYPPEALRLFLLSNHYRNPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVAL---SPFQEHGKTARINPAAEDCINKLRDEFHA 375
+Y ++++ AV + L +L +P + G R+ E + L+ F A
Sbjct: 301 DYDPEAMEASVRAVNRLKTCLGLLRESLDRPAPDGDGGGGNRL----EAVLEVLQGRFEA 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSL--NMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT+ + D +N+ L N + Q+ L L ++ R
Sbjct: 357 AMDDDFNTA-LAQAVMFDLTHEVNTYLHQNDRPSRGALQKALDLFDAFN----------R 405
Query: 434 ILGLLP 439
+LG+ P
Sbjct: 406 VLGIFP 411
>gi|119897351|ref|YP_932564.1| cysteinyl-tRNA synthetase [Azoarcus sp. BH72]
gi|119669764|emb|CAL93677.1| CysS protein [Azoarcus sp. BH72]
Length = 460
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 188/378 (49%), Positives = 236/378 (62%), Gaps = 18/378 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L I+N++++ KE+F PI GKV MYVCG+T YD HLGHAR V FD++ R+L +V
Sbjct: 2 LSIHNTLSRSKEVFRPIEPGKVRMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + GE+ +L++R+ D L L P ++PR +D++ +
Sbjct: 62 TYVRNITDIDDKIIRRAQENGESIRALTDRFIAAMHEDADALGVLRPDHEPRATDYVASM 121
Query: 139 KDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ +I ++ AYV DV +AV K YG+LSG+ L+ RAGERV V K++P DF
Sbjct: 122 QSLIERLHAKGLAYVAANHDVCYAVRKFEGYGKLSGKSLDELRAGERVEVAGEKKDPLDF 181
Query: 198 ALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWK AKA EP W SPWG GRPGWHIECSAMS+ L FDIHGGG DL FPHHENE
Sbjct: 182 VLWKHAKAEEPDEAKWASPWGSGRPGWHIECSAMSSDLLGEHFDIHGGGQDLQFPHHENE 241
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A + V+YWMHNG V ++EKMSKSLGNFFTIR + E Y +R F++ AHY
Sbjct: 242 IAQSEGAHGHAFVNYWMHNGFVRVDDEKMSKSLGNFFTIRDVLETYDAEVVRFFILRAHY 301
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
RSPLNYS LD A A+ +Y L+ E A PAA D F
Sbjct: 302 RSPLNYSDAHLDDARQALTRLYTALRSVEAA--------------PAAVDWTESHALRFR 347
Query: 375 ARMSDDLNTSHILTGAFQ 392
A M DD NT+ L F+
Sbjct: 348 AAMDDDFNTAEALAVLFE 365
>gi|89893193|ref|YP_516680.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
gi|219666466|ref|YP_002456901.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
gi|122997351|sp|Q250Q6.1|SYC_DESHY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254781676|sp|B8G1U2.1|SYC_DESHD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|89332641|dbj|BAE82236.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536726|gb|ACL18465.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
Length = 477
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 175/377 (46%), Positives = 239/377 (63%), Gaps = 1/377 (0%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L+++N+M+ QKE F P GKVGMY CG T Y+ H+G+ R V FD++ RYL +
Sbjct: 1 MALRLFNTMSHQKEEFKPREEGKVGMYTCGPTVYNYFHVGNGRMLVVFDMIRRYLLYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+V+NFTD+DDKII+R + G +PL L+ Y EY D A L +P + P+ +DH+
Sbjct: 61 DVTFVQNFTDIDDKIIKRGQEEGRDPLELAQDYIGEYFKDAAALNLMPASIHPKATDHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ ++I + AY V+GDV+FAV+K P YG+LSG+ LE+ +AG RV V RK+NP D
Sbjct: 121 EMIEIIKGLEEQGLAYAVDGDVYFAVDKLPAYGKLSGRTLEDMQAGARVEVGERKQNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECSAMS YL S FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKNAKPGEPFWESPWGKGRPGWHIECSAMSLKYLGSGFDIHGGGGDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
Q+ + YWMHN +T N +KMSKSLGNFFT+R+I E + +R +L+ HYR
Sbjct: 241 QAEGYLHGETFARYWMHNAFLTINQQKMSKSLGNFFTVREILEHFPGEVIRFYLLGTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPL++ L A + + +++ + AL ++ A + R EF
Sbjct: 301 SPLDFDDENLQMAQKGLERLQTSIRLADEALGRQGQNSADAASGQKLRAAAEEARREFAE 360
Query: 376 RMSDDLNTSHILTGAFQ 392
M DD N++ F+
Sbjct: 361 AMDDDFNSALAYASLFE 377
>gi|399910862|ref|ZP_10779176.1| cysteinyl-tRNA synthetase [Halomonas sp. KM-1]
Length = 476
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 249/421 (59%), Gaps = 17/421 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T++KE FTPI GKV MYVCG+T YD HLGHAR V+FD++ RYL +V
Sbjct: 1 MQIYNTLTRRKEPFTPIEPGKVRMYVCGMTVYDYCHLGHARVMVAFDVVTRYLRWRDFDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKI++RA++ GE SL+ R D A L L P +PR + H+ +I
Sbjct: 61 TYVRNITDIDDKILKRADENGETIASLTERMIAAMHEDEARLGVLRPDREPRATGHVSEI 120
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ +I+ Y GDV++ V K YG+L+ + L+ RAG RV VD K +P DF
Sbjct: 121 IAMVETLIDKGYGYPAANGDVYYRVRKFEGYGKLNNRNLDEMRAGARVDVDEHKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GE SW SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 181 VLWKAAKPGEASWPSPWGEGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+ WMH G V N EKMSKSLGNFFTIR++ E + P +R+ L+++HYRSP
Sbjct: 241 SEAATGKPYVNTWMHAGAVRVNQEKMSKSLGNFFTIREVLEVHDPEVVRYLLVASHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NY+ L A ++ Y L V ++ + A+ D F M
Sbjct: 301 INYAPESLADARKSLERFYNALDGVGVG---GKDEKTIQKERALAKAVYGDFEDRFIVAM 357
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ L+ F + LN KK+ K + +E+K + +LGL
Sbjct: 358 DDDFNTAEALSVLFD-----LARELNRAKKEATKLAP--------GLAHELKRLGGVLGL 404
Query: 438 L 438
L
Sbjct: 405 L 405
>gi|375122626|ref|ZP_09767790.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|326626876|gb|EGE33219.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
Length = 461
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAEIVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + +P AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFN 351
>gi|386014979|ref|YP_005933256.1| cysteinyl-tRNA synthetase [Pantoea ananatis AJ13355]
gi|327393038|dbj|BAK10460.1| cysteinyl-tRNA synthetase CysS [Pantoea ananatis AJ13355]
Length = 461
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 253/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE FTPI GK+GMYVCG+T YDL H+GH R V+FD++ RYL ++ +V
Sbjct: 2 LKIYNTLSRQKEEFTPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRYVGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ +L+NR E D L LPP +PR + H+ +I
Sbjct: 62 NYVRNITDIDDKIIKRANENGESIETLTNRMIAEMHSDFDALGILPPDREPRATRHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV E GDV F V +YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 VELVEKLIARGHAYVAENGDVMFDVLSDVDYGALSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KA EPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKADEPSWPSPWGQGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY L+ A A+ +Y L+ + HG A F M
Sbjct: 302 LNYGEDNLNQARAALERLYTALRHTDRNAVA---HGGEA------------FEARFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + + + + +++E+ +LG+
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRLKGED--------MTAANALAAKLREIANVLGI 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|82775639|ref|YP_401986.1| cysteinyl-tRNA synthetase [Shigella dysenteriae Sd197]
gi|109894938|sp|Q32JL0.1|SYC_SHIDS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|81239787|gb|ABB60497.1| cysteine tRNA synthetase [Shigella dysenteriae Sd197]
Length = 461
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 228/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFNALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYVV+ GDV F V P YG LS Q L+ AG RV V KRN DF
Sbjct: 122 IELTEQLIAKGHAYVVDNGDVMFDVPTDPTYGVLSRQDLDQLLAGARVDVVDDKRNTMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|238762909|ref|ZP_04623877.1| Cysteinyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
gi|238698920|gb|EEP91669.1| Cysteinyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
Length = 461
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 251/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLKRPDLEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I + AYV GDV F+VE P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTERLIAREHAYVAANGDVMFSVESDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ G A PA + F A M
Sbjct: 302 LNYSEENLKQARASLERLYTALR------------GTDANATPAGG---AEFEARFRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + + + + E++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKAED--------MTAANALAAELRKLAHVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|297618406|ref|YP_003703565.1| cysteinyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
gi|297146243|gb|ADI03000.1| cysteinyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
Length = 539
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 179/406 (44%), Positives = 252/406 (62%), Gaps = 3/406 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN+++++KE + KV MYVCG T Y+ HLG+AR V FD++ RYL++ EV
Sbjct: 2 IQVYNTLSRRKERLNTLEPNKVKMYVCGPTTYNYIHLGNARPLVVFDIIRRYLQYKGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII+R+ + G++ ++ +Y EY D L Y PRVSDH+ I
Sbjct: 62 TYVQNFTDVDDKIIQRSQEEGKSAAEVAGKYIDEYFRDADALGVKRADYHPRVSDHIPDI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++ AY + GDV++ V YG+LSG+ LE AG RV VD RK +P DFA
Sbjct: 122 IRVIETLVEKGYAYRIGGDVYYRVRAFERYGQLSGRSLEEMLAGARVEVDERKEDPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP+W+SPWGPGRPGWHIECS M+ YL DIHGGG DL+FPHHENEIAQS
Sbjct: 182 LWKEAKPGEPAWESPWGPGRPGWHIECSVMAMKYLGETLDIHGGGADLVFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V YW+HNG +T N EKMSKSLGNFF +R+I +Y +R +L S HYRSPL
Sbjct: 242 EAYSGRPFVRYWLHNGFITVNKEKMSKSLGNFFILREILSQYPAEVVRFYLGSTHYRSPL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCE--VALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
++ +L+ A A+ + TL+ V + + +T + +++L+++F
Sbjct: 302 DFDNTKLEEAGRALARLNNTLRRLNEVVKNEEVEANDETRDADKGFVSRLHELKEKFEVA 361
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 422
M DD NT+ + G D + IN+ L+ + + + ++ E+ R
Sbjct: 362 MDDDFNTAQAI-GYLFDMAREINAYLDFWEGEGSSKAPAAIKEAYR 406
>gi|238027920|ref|YP_002912151.1| cysteinyl-tRNA synthetase [Burkholderia glumae BGR1]
gi|237877114|gb|ACR29447.1| Cysteinyl-tRNA synthetase [Burkholderia glumae BGR1]
Length = 464
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 190/399 (47%), Positives = 250/399 (62%), Gaps = 19/399 (4%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L+IYN++ + K++F P G+V MYVCG+T YD H+GHAR V FD++ R+L L
Sbjct: 3 SLRIYNTLARDKQVFVPRHPGEVRMYVCGITVYDYCHVGHARMMVVFDVVQRWLRALGYR 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKIIRRA + GE SL++R+ D+ L P ++PR +D + Q
Sbjct: 63 VTYVRNITDIDDKIIRRAVENGETIGSLTSRFIAAMHEDLDALGVARPEHEPRATDFVPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI + N AY +GDV +AV K NYGRLSG+ L++ RAGERVA + K++P D
Sbjct: 123 MLGMIETLEANGYAYQASDGDVNYAVRKFANYGRLSGKSLDDLRAGERVAANDAKQDPLD 182
Query: 197 FALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK+AK GEP SWDS +G GRPGWHIECSAM L FDIHGGG DL FPHHEN
Sbjct: 183 FVLWKSAKPGEPADTSWDSKYGRGRPGWHIECSAMGCTLLGHHFDIHGGGQDLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A ++ V+YWMHNG V ++EKMSKSLGNFFTIR++ RY +R F++ H
Sbjct: 243 EIAQSEGATGETFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLARYDAEVMRFFIVRTH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSPLNYS + LD A ++ +Y L+D +P AR F
Sbjct: 303 YRSPLNYSEVHLDDARASLTRLYTALKDVTPDAAPLDRDEPHAR--------------RF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 412
A M+DD NT+ ++ F+ A + +N + +Q KQ
Sbjct: 349 AAAMNDDFNTALAVSVLFELAGE-VNRTREPALARQLKQ 386
>gi|433480605|ref|ZP_20437886.1| cysteine--tRNA ligase [Neisseria meningitidis 63041]
gi|433514404|ref|ZP_20471186.1| cysteine--tRNA ligase [Neisseria meningitidis 63049]
gi|433520767|ref|ZP_20477475.1| cysteine--tRNA ligase [Neisseria meningitidis 65014]
gi|433541958|ref|ZP_20498396.1| cysteine--tRNA ligase [Neisseria meningitidis 63006]
gi|432213882|gb|ELK69792.1| cysteine--tRNA ligase [Neisseria meningitidis 63041]
gi|432245366|gb|ELL00836.1| cysteine--tRNA ligase [Neisseria meningitidis 63049]
gi|432251383|gb|ELL06752.1| cysteine--tRNA ligase [Neisseria meningitidis 65014]
gi|432275029|gb|ELL30107.1| cysteine--tRNA ligase [Neisseria meningitidis 63006]
Length = 473
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 239/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSEN----------- 352
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+N F+A M+DD T + F+
Sbjct: 353 --VNDYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|422785137|ref|ZP_16837876.1| cysteinyl-tRNA synthetase [Escherichia coli H489]
gi|323963293|gb|EGB58857.1| cysteinyl-tRNA synthetase [Escherichia coli H489]
Length = 461
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 228/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ E+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENSESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|422017177|ref|ZP_16363745.1| cysteinyl-tRNA ligase [Providencia alcalifaciens Dmel2]
gi|414105882|gb|EKT67436.1| cysteinyl-tRNA ligase [Providencia alcalifaciens Dmel2]
Length = 462
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 255/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD + RYL +L ++
Sbjct: 2 LQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E+ L+ R E D L L P +PR + H+ +I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVEELTTRMLAEMHKDFDALNILRPDSEPRATRHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V+ PNYG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTESLIERGHAYVADNGDVMFEVKTDPNYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + E Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ +Y L+ + + +P A I K R F M
Sbjct: 302 LNYTEENLKQARTALERLYTALRGTDKSATP-------------AGGEIYKSR--FCEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A LN LK + +++ + +++E+ ++LGL
Sbjct: 347 NDDFNTPEAYSALFDMA-----RELNRLKTEN--------MDAANGMAAQLRELAKVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|365840758|ref|ZP_09381935.1| cysteine--tRNA ligase [Anaeroglobus geminatus F0357]
gi|364560501|gb|EHM38435.1| cysteine--tRNA ligase [Anaeroglobus geminatus F0357]
Length = 481
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 190/424 (44%), Positives = 262/424 (61%), Gaps = 14/424 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T++KELF P+ G+V MYVCG+T Y+ SH+G+AR V++D++ RYL+HL +V
Sbjct: 4 LTVYNTLTRKKELFKPVTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLKHLGYQV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+++NFTDVDDKII AN +++NRY Y M L+ PRVS+HM+ I
Sbjct: 64 THIQNFTDVDDKIINAANGEDAAWDTVANRYIASYFEVMDKLRVQRADRYPRVSEHMDDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI +++ AY ++GD+++ V NYG LS + L++ AG R+ VD RK NP DFA
Sbjct: 124 ISMIGELVKKGHAYELDGDIYYRVRSFENYGELSHRSLDDMMAGARIEVDDRKENPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEP+WDSPWG GRPGWHIECSAMS YL FD HGGG DLIFPHHENEIAQ+
Sbjct: 184 LWKSAKPGEPAWDSPWGKGRPGWHIECSAMSLKYLGEPFDFHGGGSDLIFPHHENEIAQT 243
Query: 259 CAAC-QDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
A C V+YW+HNG +T ++EKMSKSL NFF ++ + E Y ALR+FLIS HYRSP
Sbjct: 244 EACCGHGPMVNYWVHNGFITIDSEKMSKSLNNFFLVKDVLEHYSADALRYFLISNHYRSP 303
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR---INPAAEDCINKLRDEFH 374
L++S +L + ++ + + + L G A +N A K ++F
Sbjct: 304 LDFSDERLTEMTRSLERLGTAIDNTLYLLDLPSGSGSAASAQLLNDA-----RKAMEDFE 358
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT+ F+ A K LN+ K + L ++++ K + I
Sbjct: 359 EAMCDDFNTALASAAMFELAKK-----LNIYKNEVVTDDVPVDASVLAEVKHIFKTMTDI 413
Query: 435 LGLL 438
LG+L
Sbjct: 414 LGIL 417
>gi|290476082|ref|YP_003468980.1| cysteine tRNA synthetase [Xenorhabdus bovienii SS-2004]
gi|289175413|emb|CBJ82216.1| cysteine tRNA synthetase [Xenorhabdus bovienii SS-2004]
Length = 460
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 194/421 (46%), Positives = 249/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L ++
Sbjct: 2 LKIFNTLSRQKEEFKPIHEGKVGMYVCGITIYDLCHIGHGRTFVAFDVIARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E+ +L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRATENNESCDALTTRMLSEMHSDFDALNIQRPDSEPRATQHISEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++IN AYV + GDV F+++ +P+YG LS Q LE +AG RV + KRNP DF
Sbjct: 122 IQITEELINRGHAYVADNGDVMFSIDTNPDYGLLSRQDLEQLQAGARVEIADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGVGRPGWHIECSAMNGKQLGQHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHGGPYVNYWMHSGMVMVDKEKMSKSLSNFFTIRDVLGYYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ +Y L+ + + P AR A M
Sbjct: 302 LNYTEENLKQARTALERLYTALRGTDKSAQPTGSEAFEARFTEA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F I +N LK + E LRK+ ILGL
Sbjct: 347 NDDFNTPEAYSVLFD-----IAREINCLKTENLAAANGLAAE-LRKLAG-------ILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|392538778|ref|ZP_10285915.1| cysteinyl-tRNA ligase [Pseudoalteromonas marina mano4]
Length = 459
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 195/408 (47%), Positives = 246/408 (60%), Gaps = 24/408 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T+QKE F P+V GK+ MYVCG+T YD H+GHAR V FD++ RYL H+ +
Sbjct: 2 VQIYNTLTRQKEQFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RAN+ E+ L+ R + D L L P +P V+ HM +I
Sbjct: 62 KYVRNITDVDDKIIKRANENKESINDLTLRMTKAMHEDFDSLNMLRPDVEPTVTGHMGEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ ++I AYV +GDV F V YG LS Q L ++G RV V K +P DF
Sbjct: 122 IEMVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSL NFFT+R + + Y P ++R+FLIS HYRS
Sbjct: 242 SCCANNGEYVNTWIHTGMVQVNKEKMSKSLDNFFTVRDVLKEYDPESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A ++ IY L+D + P + E N+ +F M
Sbjct: 302 LNYSQENLDQARSSLERIYTALRD----VKPIE-----------CELESNEFVIKFRKAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ-QLSLIESLRKI 424
DD NT L F+ + LN +K+ Q QL+ I LR I
Sbjct: 347 DDDFNTPEALPVLFE-----LAKELNRVKESDAIQAGQLAFI--LRTI 387
>gi|161869111|ref|YP_001598277.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 053442]
gi|161594664|gb|ABX72324.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 053442]
Length = 699
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 238/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 469
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 470 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 530 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSEN----------- 578
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+N F+A M+DD T + F+
Sbjct: 579 --VNDYTRRFYAAMNDDFGTVEAVAVLFE 605
>gi|420257596|ref|ZP_14760352.1| cysteinyl-tRNA ligase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|404515001|gb|EKA28780.1| cysteinyl-tRNA ligase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 461
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 195/421 (46%), Positives = 249/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRALENNETCEQLTTRMLVEMHKDFDALNLKRPDLEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I + AYV GDV F+VE P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IALTERLIARNHAYVAANGDVMFSVESDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ G A PA + F A M
Sbjct: 302 LNYSEENLKQARASLERLYTALR------------GTDANATPAGG---AEFEARFRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + I + + E++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKTED--------ITAANALAAELRKLAHVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|385787638|ref|YP_005818747.1| cysteinyl-tRNA synthetase [Erwinia sp. Ejp617]
gi|310766910|gb|ADP11860.1| Cysteinyl-tRNA synthetase [Erwinia sp. Ejp617]
Length = 462
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 177/351 (50%), Positives = 229/351 (65%), Gaps = 2/351 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI GK+GMYVCG+T YDL H+GH R +FD++ RYL + +
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYHL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ L+NR E D A L LPP +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESIERLTNRMIDEMHQDFAALNILPPDLEPRATRHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR-KRNPAD 196
+++ ++I + AYV GDV F+V+ P YG LS Q L+ +AG RV V + KRNP D
Sbjct: 122 IELVEKLITREHAYVASNGDVMFSVDSDPQYGSLSRQDLDQLQAGARVEVAADVKRNPMD 181
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +KA EP W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIA
Sbjct: 182 FVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIA 241
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V+YWMH+G V + EKMSKSL NFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 QSTCAHDGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLQHYDAETVRYFLMSGHYRS 301
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNY L+ A A+ +Y L++ + +P AR A +D N
Sbjct: 302 QLNYGEDNLNQARSALERLYIALRNTDTRATPAGGEEFEARFREAMDDDFN 352
>gi|359449072|ref|ZP_09238573.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20480]
gi|358045104|dbj|GAA74822.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20480]
Length = 459
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 195/408 (47%), Positives = 246/408 (60%), Gaps = 24/408 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T+QKE F P+V GK+ MYVCG+T YD H+GHAR V FD++ RYL H+ +
Sbjct: 2 VQIYNTLTRQKEQFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RAN+ E+ L+ R + D L L P +P V+ HM +I
Sbjct: 62 KYVRNITDVDDKIIKRANENKESINDLTLRMTKAMHEDFDSLNMLRPDVEPTVTGHMGEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ ++I AYV +GDV F V YG LS Q L ++G RV V K +P DF
Sbjct: 122 IEMVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGARVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSL NFFT+R + + Y P ++R+FLIS HYRS
Sbjct: 242 SCCANNGEYVNTWIHTGMVQVNKEKMSKSLDNFFTVRDVLKEYDPESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A ++ IY L+D + P + E N+ +F M
Sbjct: 302 LNYSQENLDQARSSLERIYTALRD----VKPIE-----------CELESNEFVIKFRKAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ-QLSLIESLRKI 424
DD NT L F+ + LN +K+ Q QL+ I LR I
Sbjct: 347 DDDFNTPEALPVLFE-----LAKELNRVKESDAIQAGQLAFI--LRTI 387
>gi|333908247|ref|YP_004481833.1| cysteinyl-tRNA synthetase [Marinomonas posidonica IVIA-Po-181]
gi|333478253|gb|AEF54914.1| cysteinyl-tRNA synthetase [Marinomonas posidonica IVIA-Po-181]
Length = 460
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 176/350 (50%), Positives = 232/350 (66%), Gaps = 2/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN+++ +KE+F PI GKVGMYVCG T YD H+GHARA +SFD++ R++ HL E+
Sbjct: 2 LKIYNTLSGKKEIFKPIEEGKVGMYVCGNTVYDFCHIGHARAMISFDVISRFIRHLGYEL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E +L+ R D L P +P+ ++ M+QI
Sbjct: 62 NYVRNITDVDDKIIKRAEENNETTQALTERMIAAQREDELRLGNKMPDREPKATEFMQQI 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ +I+ AY GDV++ YG+L+ ++LE+ AG R+ V++ K +PADF
Sbjct: 122 IDMVQVLIDKGFAYQGTSGDVYYRATAFKEYGKLNNRKLEDMLAGARIDVETAKEHPADF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GE +W+SPWG GRPGWHIECSAMS + L S FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKQAKVGEVAWESPWGLGRPGWHIECSAMSTNCLGSHFDIHGGGPDLKFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+YWMH G V NNEKMSKSLGNFFT+R + E+Y+P +R+ ++S+ YRSP
Sbjct: 242 SEAATGKDYVNYWMHCGAVRVNNEKMSKSLGNFFTVRDVLEKYNPEVVRYLMVSSQYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
++YS L+ A A+ +Y L+ VA + TAR A +D N
Sbjct: 302 IDYSDQSLNEAKVALERLYTALRQQSVA-EEWVASEYTARFEEAMQDDFN 350
>gi|403059410|ref|YP_006647627.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402806736|gb|AFR04374.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 461
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 197/425 (46%), Positives = 250/425 (58%), Gaps = 37/425 (8%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE L+ R E D L L P +PR + H+ I
Sbjct: 62 KYVRNVTDIDDKIIKRAIENGETSDQLTTRMIAEMHADFDALNILRPDAEPRATHHIADI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ +I AYV GDV F+V+ +P YG LS Q L+ +AG RV + KRNP DF
Sbjct: 122 IEMVETLIARRHAYVASNGDVMFSVDTAPGYGVLSRQDLDQLQAGARVEITEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A S V+YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS
Sbjct: 242 SSCAHDGSYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR- 376
LNYS L A A+ +Y L+ + + + HG DEF AR
Sbjct: 302 LNYSEDNLKQARAALDRLYTALRGTDASAAA---HGG----------------DEFEARF 342
Query: 377 ---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT + F A +N LK + Q L +LRK+
Sbjct: 343 REAMDDDFNTPEAYSVLFDMA-----REVNRLKTEDV-QAANQLASALRKLSG------- 389
Query: 434 ILGLL 438
+LGLL
Sbjct: 390 VLGLL 394
>gi|385331930|ref|YP_005885881.1| cysteinyl-tRNA synthetase [Marinobacter adhaerens HP15]
gi|311695080|gb|ADP97953.1| cysteinyl-tRNA synthetase [Marinobacter adhaerens HP15]
Length = 462
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 187/367 (50%), Positives = 240/367 (65%), Gaps = 15/367 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++TQQKE F PI GKV MYVCG+T YD HLGHAR V+FD++ RYL H +V
Sbjct: 2 IRIYNTLTQQKEEFRPIEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVITRYLRHRGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKI+RRA++ GE L++R + D A L L P +PR + ++++I
Sbjct: 62 NYVRNITDIDDKILRRADENGEPYDELTDRMIKAMHEDEARLGVLSPDEEPRATAYIDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I AY + GDV+FAV+ +YG+LS ++LE+ AG RV V KR+PADF
Sbjct: 122 IAMIHKLIAGGHAYAADNGDVYFAVDSFDDYGKLSKKKLEDLLAGARVDVQEAKRSPADF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAKAGE SW SPWG GRPGWHIECSAMS L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 ALWKAAKAGEVSWPSPWGDGRPGWHIECSAMSTCCLGETFDIHGGGPDLLFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMH G + N EKMSKSLGNFFTIR+I E+Y +R+FL+S+HYRS
Sbjct: 242 SECATGHTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREIMEKYPAEVVRYFLVSSHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++YS L A + +Y L+ + P K A + + D + F M
Sbjct: 302 VDYSEENLAEAGRTLTRLYHALR----GIVP----AKAADVPESEHD------ERFAEAM 347
Query: 378 SDDLNTS 384
DD NT+
Sbjct: 348 DDDFNTA 354
>gi|385858044|ref|YP_005904556.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
gi|325208933|gb|ADZ04385.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
Length = 473
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 239/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSEN----------- 352
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+N F+A M+DD T + F+
Sbjct: 353 --VNDYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|302390630|ref|YP_003826451.1| cysteinyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
gi|302201258|gb|ADL08828.1| cysteinyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
Length = 465
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 184/423 (43%), Positives = 257/423 (60%), Gaps = 18/423 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T++KE F P+ KV +Y CG T YD H+G+AR ++FD++ YL++ EV
Sbjct: 1 MRIYNTLTRRKEEFIPLNGNKVTIYTCGPTVYDFFHVGNARVFITFDVIRNYLKYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I+RAN+ G L +R+ +EY D L PR ++H+E I
Sbjct: 61 KFVQNFTDIDDKMIKRANEEGVTVKELGDRFIKEYFKDADALNIKRADVHPRATEHIEDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I +I AY V GDV+FA K P YG+LSGQ LE AG RV +K++P DFA
Sbjct: 121 IEFIKVLIEKGYAYEVGGDVYFAARKFPGYGKLSGQNLEELEAGARVEPGEKKKDPIDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEPSW SPWG GRPGWHIECSAM+ +L DIHGGG DLIFPHHENE+AQS
Sbjct: 181 LWKAKKPGEPSWPSPWGEGRPGWHIECSAMAMKHLGETIDIHGGGPDLIFPHHENEVAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A ++MH G++ NNEKMSKSLGNFFT+R I + Y+P LR ++S+HYRSP+
Sbjct: 241 EAFTGKPFARFFMHVGYLNINNEKMSKSLGNFFTVRDILKEYNPEVLRFLMLSSHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHA 375
N+S LD + A+ +Y L A+ + +N E+ + + +++F
Sbjct: 301 NFSRELLDQSKSALERLYNAL----YAMEHLENAAPERPLNGEEEEYLRRQLENKNKFKD 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT+ + F D ++ N SLN + S E+++K + V E+ +L
Sbjct: 357 AMDDDFNTAGAIAVLF-DMIREFNVSLN----------ENSSREAVKKTKEMVLELGGVL 405
Query: 436 GLL 438
G
Sbjct: 406 GFF 408
>gi|392541321|ref|ZP_10288458.1| cysteinyl-tRNA synthetase [Pseudoalteromonas piscicida JCM 20779]
Length = 459
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 189/394 (47%), Positives = 241/394 (61%), Gaps = 21/394 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++T+QK F P+ GKV MYVCG+T YD H+GHAR VSFD++ RYL +L +V
Sbjct: 2 LQIFNTLTRQKAPFKPLKEGKVDMYVCGITIYDFCHVGHARTYVSFDVMNRYLRYLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E+ L+ R + D L LP +P V+ HM++I
Sbjct: 62 TYVRNITDVDDKIIKRAAENNESINDLTVRMTKAMHEDFTALNMLPADIEPTVTGHMDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+MI ++I AYV +GDV F V YG+LS Q LE +AG RV V K +P DF
Sbjct: 122 IEMIARLIEKGHAYVAKDGDVLFDVSTFEQYGQLSQQDLEMLQAGARVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEP+W SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPAWQSPWGEGRPGWHIECSAMSSKHLGEFFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSLGNFFT+R++ + + +R+FLI+ HYRS
Sbjct: 242 SCCANNGRYVNTWIHTGMVQVNKEKMSKSLGNFFTVREVLKAFDRETVRYFLINGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ IY L+ E L + G N + F M
Sbjct: 302 LNYSQENLEQARSSLERIYTALRGVE--LVEIELKG-------------NAYAERFETAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 411
+DD NT L F+ ++ +N LK K
Sbjct: 347 NDDFNTPEALPVIFE-----LSKEVNRLKDSDAK 375
>gi|237653707|ref|YP_002890021.1| cysteinyl-tRNA synthetase [Thauera sp. MZ1T]
gi|237624954|gb|ACR01644.1| cysteinyl-tRNA synthetase [Thauera sp. MZ1T]
Length = 461
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/378 (49%), Positives = 242/378 (64%), Gaps = 17/378 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++++ KE FTPI GKV MYVCG+T YD HLGHAR V FD++ R+L +V
Sbjct: 2 LSIYNTLSRSKEAFTPIEPGKVRMYVCGMTVYDFCHLGHARVMVVFDMVARWLRASGLDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + GE+ L++R+ D L L P ++PR +D++ Q+
Sbjct: 62 TYVRNITDIDDKIIRRAQENGESIRQLTDRFIAAMHEDADALGVLRPDHEPRATDYVAQM 121
Query: 139 KDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ +I+++ AYV DV +AV K YG+LSG+ L+ RAGERV V K +P DF
Sbjct: 122 QSLISRLEQKGLAYVAGNRDVCYAVRKFDGYGKLSGKSLDELRAGERVDVAQDKNDPLDF 181
Query: 198 ALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWK AK EP W SPWG GRPGWHIECSAMS+ L FDIHGGG+DL FPHHENE
Sbjct: 182 VLWKHAKVEEPGEVKWASPWGEGRPGWHIECSAMSSDLLGDHFDIHGGGMDLQFPHHENE 241
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A + V+YWMHNG V ++EKMSKSLGNFFTIR++ ++Y P +R F++ AHY
Sbjct: 242 IAQSEGAHGHAFVNYWMHNGFVRVDDEKMSKSLGNFFTIREVLQKYDPEVVRFFILRAHY 301
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
RS LNYS L+ A +A+ +Y L++ VA P + +E +LR
Sbjct: 302 RSALNYSDAHLEDARNALTRLYTALKNVPVAGEPVVDW---------SEPFAQRLR---- 348
Query: 375 ARMSDDLNTSHILTGAFQ 392
A M DD NT+ + F+
Sbjct: 349 AAMDDDFNTAEAVAVLFE 366
>gi|389606841|emb|CCA45752.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha522]
Length = 699
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 237/389 (60%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 469
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 470 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 530 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---------- 579
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 580 ---NDYTRRFYAAMNDDFGTVEAVAVLFE 605
>gi|421498398|ref|ZP_15945512.1| cysteinyl-tRNA synthetase [Aeromonas media WS]
gi|407182600|gb|EKE56543.1| cysteinyl-tRNA synthetase [Aeromonas media WS]
Length = 458
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 196/418 (46%), Positives = 251/418 (60%), Gaps = 27/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YD H+GH R VSFD++ RYL + ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVSFDVVARYLRYAGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + L+ R + D L L P +PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRAAETRVTCDDLTERLIGDMHQDFDALGMLRPDIEPRATQHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++ + AYV + GDV F VE +YG+LSGQ LE +AG RV V KRNP DF
Sbjct: 122 IALVETLLEKEHAYVADNGDVMFIVESFADYGKLSGQDLEQLQAGARVDVVEAKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + + +R+FL+S HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHFDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+D A + + + AR A M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPAAAAAGGDE-QVARFVDA---------------M 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
DD NT + F D ++ IN + K + +++ L E+ VL IL
Sbjct: 346 DDDFNTPEAYSALF-DLVREIN---------RQKAEDIAVAAGLGARLRELGAVLGIL 393
>gi|409202160|ref|ZP_11230363.1| cysteinyl-tRNA synthetase [Pseudoalteromonas flavipulchra JG1]
Length = 459
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 187/394 (47%), Positives = 240/394 (60%), Gaps = 21/394 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++T+QK F P+ GKV MYVCG+T YD H+GHAR VSFD++ RYL +L +V
Sbjct: 2 LQIFNTLTRQKAPFKPLKEGKVDMYVCGITIYDFCHVGHARTYVSFDVMNRYLRYLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E+ L+ R + D L LP +P V+ HM++I
Sbjct: 62 TYVRNITDVDDKIIKRAAENKESINDLTVRMTKAMHEDFTALNMLPADIEPTVTGHMDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+MI ++I AYV +GDV F V YG+LS Q LE +AG RV V K +P DF
Sbjct: 122 IEMIVRLIEKGHAYVAKDGDVLFDVSTFEQYGQLSQQDLEMLQAGARVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEP+W SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPAWQSPWGEGRPGWHIECSAMSSKHLGEFFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSLGNFFT+R++ + + +R+FLI+ HYRS
Sbjct: 242 SCCANNGRYVNTWIHTGMVQVNKEKMSKSLGNFFTVREVLKAFDRETVRYFLINGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ IY L+ E+ + + R F M
Sbjct: 302 LNYSQENLEQARSSLERIYTALRGVELVEVELKGNAYVER---------------FETAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 411
+DD NT L F+ ++ +N LK K
Sbjct: 347 NDDFNTPEALPVIFE-----LSKEVNRLKDSDAK 375
>gi|339998481|ref|YP_004729364.1| cysteinyl-tRNA synthetase [Salmonella bongori NCTC 12419]
gi|339511842|emb|CCC29553.1| cysteinyl-tRNA synthetase [Salmonella bongori NCTC 12419]
Length = 461
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 INITQTLIEKGHAYVADNGDVMFDVPTDPAYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + +P AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFN 351
>gi|170767865|ref|ZP_02902318.1| cysteinyl tRNA synthetase [Escherichia albertii TW07627]
gi|170123353|gb|EDS92284.1| cysteinyl tRNA synthetase [Escherichia albertii TW07627]
Length = 461
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 227/350 (64%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L R E D L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVERMIAEMHKDFDALNIQRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|389852533|ref|YP_006354767.1| cysteinyl-tRNA synthetase [Pyrococcus sp. ST04]
gi|388249839|gb|AFK22692.1| cysteinyl-tRNA synthetase [Pyrococcus sp. ST04]
Length = 451
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 177/389 (45%), Positives = 239/389 (61%), Gaps = 7/389 (1%)
Query: 42 MYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGEN 101
MYVCG T YD HLGHAR ++FD++ RYLEH V V NFTD+DDKIIRRAN+ GE+
Sbjct: 1 MYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGYTVLMVMNFTDIDDKIIRRANETGED 60
Query: 102 PLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFA 161
P L+ ++ + +L DM L+ P PRV++H+E I I ++I AY V+F
Sbjct: 61 PKELAEKFIKVFLEDMRALKVKPADIYPRVTEHIEDIIRFIEKLIEKGYAYEGSDGVYFE 120
Query: 162 VEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGW 221
V+K YG+LSG ++E R G RV K+NP DFALWK AK GEP W+SPWG GRPGW
Sbjct: 121 VQKFSEYGKLSGIKIEELRKGARVEPGEGKKNPEDFALWKKAKPGEPKWESPWGDGRPGW 180
Query: 222 HIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNE 281
HIECS MS+ YL FDIHGGG DLIFPHHENEIAQS A V YW+H G V E
Sbjct: 181 HIECSVMSSKYLGESFDIHGGGNDLIFPHHENEIAQSEACFGHEWVRYWLHTGFVMVKGE 240
Query: 282 KMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQD 341
KMSKSLGNF T+R++ +RY+P +R F++ HYRSPL+Y+ L A + + +Y TL++
Sbjct: 241 KMSKSLGNFVTVRELLQRYNPEVIRFFVLQKHYRSPLDYTEEGLQHAKNNLERLYNTLEN 300
Query: 342 CEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSS 401
A+ + A + I + +F+ M DD NT+ L F+ ++++
Sbjct: 301 IRTAMKEAELSYTWGEEEFEAYEAIKSAKRKFYEAMDDDFNTAEALKAVFE-----VSNA 355
Query: 402 LN--MLKKKQPKQQQLSLIESLRKIENEV 428
+N + + ++PK+ L KI +E+
Sbjct: 356 INRYLTEVERPKESVLRKAWEFFKIVSEI 384
>gi|430748585|ref|YP_007211493.1| cysteinyl-tRNA synthetase [Thermobacillus composti KWC4]
gi|430732550|gb|AGA56495.1| cysteinyl-tRNA synthetase [Thermobacillus composti KWC4]
Length = 482
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 189/441 (42%), Positives = 265/441 (60%), Gaps = 19/441 (4%)
Query: 16 DLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLK 75
D ++IYN+M+++KE+F P+ GKV MYVCG T YD H+G+AR A+ FD++ RYLE +
Sbjct: 3 DGQIRIYNTMSREKEVFVPLTPGKVNMYVCGPTVYDYIHIGNARPAIFFDVVRRYLEAVG 62
Query: 76 CEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHM 135
EV Y+ NFTDVDDK+IR+A D+G ++ +Y + D+ L T PRV H+
Sbjct: 63 YEVNYIVNFTDVDDKLIRKAADIGSTVPEVAEKYIAAFNEDIEALGVRKATVNPRVMHHI 122
Query: 136 EQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
QI I ++ AY GDV+F K P YG+LS Q E + G R+ V +K NP
Sbjct: 123 PQIIAFIQGLVERGYAYESGGDVYFRTLKFPEYGKLSHQNPEELQYGIRIEVGEKKENPQ 182
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DFALWKAAK GE W+SPWGPGRPGWHIECSAM+ Y DIHGGG DL FPHHE E+
Sbjct: 183 DFALWKAAKPGEIFWESPWGPGRPGWHIECSAMAREYAGDTLDIHGGGHDLQFPHHECEV 242
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS + YWMHNG++ NNEKMSKSLGN T++++ +R P A+R+F++S HYR
Sbjct: 243 AQSESFTGKPLARYWMHNGYIHINNEKMSKSLGNGITVKELLKRTKPAAVRYFMLSTHYR 302
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG----KTARIN-----PAAEDCI 366
SPLN++ + A +++ I + L+ G + AR + P + I
Sbjct: 303 SPLNFTDETIRQAENSIERIVNCHVNLNHRLAALGSRGAAEAEQARASGSTGEPELDQRI 362
Query: 367 NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 426
++R FH +MSDD NT +T F D + N +L K++ LS +R + +
Sbjct: 363 AEIRARFHEKMSDDFNTPDAVTALF-DLVSEANQAL--------KREVLSGA-VIRVLLD 412
Query: 427 EVKEVLRILGLLPPGAYSEVK 447
E++ + R+LG LPP ++++
Sbjct: 413 EMEAMDRVLGFLPPADAAQLE 433
>gi|123443257|ref|YP_001007231.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|187470968|sp|A1JNP9.1|SYC_YERE8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|122090218|emb|CAL13084.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 461
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 195/421 (46%), Positives = 249/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRALENNETCEQLTTRMLVEMHKDFDALNLKRPDLEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I + AYV GDV F+VE P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IALTERLIARNHAYVAANGDVMFSVESDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ G A PA + F A M
Sbjct: 302 LNYSEENLKQARASLERLYTALR------------GTDANATPAGG---AEFEARFRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + I + + E++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKTED--------ITAANALAAELRKLAYVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|334705447|ref|ZP_08521313.1| cysteinyl-tRNA synthetase [Aeromonas caviae Ae398]
Length = 458
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 195/418 (46%), Positives = 251/418 (60%), Gaps = 27/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YD H+GH R V+FD++ RYL + ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + L+ R + D L + P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAAETHVTCDDLTERLIGDMHQDFDALGMVRPDIEPRATQHIGEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++ AYV + GDV F VE +YG+LSGQ LE +AG RV V KRNP DF
Sbjct: 122 IALVETLLEKGHAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+D +A + + + AR A M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPLAAAAGGDE-QVARFKEA---------------M 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
DD NT + F D ++ IN + K + +++ L E+ VL IL
Sbjct: 346 DDDFNTPEAYSALF-DLVREIN---------RQKAEDMAVAAGLGARLRELGAVLGIL 393
>gi|306813010|ref|ZP_07447203.1| cysteinyl-tRNA synthetase [Escherichia coli NC101]
gi|432970700|ref|ZP_20159578.1| cysteinyl-tRNA synthetase [Escherichia coli KTE207]
gi|433081471|ref|ZP_20267945.1| cysteinyl-tRNA synthetase [Escherichia coli KTE133]
gi|305853773|gb|EFM54212.1| cysteinyl-tRNA synthetase [Escherichia coli NC101]
gi|431485837|gb|ELH65494.1| cysteinyl-tRNA synthetase [Escherichia coli KTE207]
gi|431605306|gb|ELI74695.1| cysteinyl-tRNA synthetase [Escherichia coli KTE133]
Length = 461
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 227/350 (64%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KR P DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRTPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMNDDFN 351
>gi|257126844|ref|YP_003164958.1| cysteinyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
gi|257050783|gb|ACV39967.1| cysteinyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
Length = 483
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 168/386 (43%), Positives = 244/386 (63%), Gaps = 3/386 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN+MT + E F I KV MYVCG T Y+ HLG+AR V FD L RY EH EV
Sbjct: 1 MKLYNTMTNKIEEFKTIEENKVKMYVCGPTVYNYIHLGNARPIVVFDTLARYFEHKGMEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTDVDDKII ++ + G + +S +Y + + D++ L L +P+V+++M ++
Sbjct: 61 EFVQNFTDVDDKIINKSMEEGTSASEVSEKYIKYFFEDISKLNILESVKRPKVTENMSEV 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++I ++I+N AY +GDV+F V+K +YG+LS Q++E G R+ V K+NP DFA
Sbjct: 121 IEIIQKLIDNGFAYEKDGDVYFEVKKYKDYGKLSNQKIEELELGARIDVSEIKKNPVDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GEP W+SPWG GRPGWHIECSAM+ YL FDIHGGG DL+FPHHENEIAQS
Sbjct: 181 LWKKKKDGEPFWESPWGQGRPGWHIECSAMAKKYLGDTFDIHGGGQDLVFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + +YW+HNG + N +KMSKSLGNFF +R+I E++ +R F++S HYR P+
Sbjct: 241 KCAYHGNFANYWLHNGFIQINGDKMSKSLGNFFLLREILEKFSGNVIRLFILSTHYRKPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S ++ A+ I +++ E + ++ N I++ +F M+
Sbjct: 301 NFSFENMEDTKKALQNIIKSMNKFENIVEKYKNEKIENVKNSEFSQKIDEFDKKFEEAMA 360
Query: 379 DDLNTSHILTGAF---QDALKFINSS 401
+D+NT L F ++ KFI+++
Sbjct: 361 EDMNTPQALATIFDQIRETNKFISTN 386
>gi|365921978|ref|ZP_09446221.1| cysteine--tRNA ligase [Cardiobacterium valvarum F0432]
gi|364575078|gb|EHM52496.1| cysteine--tRNA ligase [Cardiobacterium valvarum F0432]
Length = 451
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 185/385 (48%), Positives = 235/385 (61%), Gaps = 19/385 (4%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
L+ YNS+++QKE F P+ G+ GMYVCG+T YD H+GHAR V FD + R+L L E
Sbjct: 3 ALQFYNSLSRQKEPFHPLHAGRTGMYVCGMTVYDYCHIGHARVMVVFDTIARHLRALGYE 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
+ YVRN TD+DDKII RA + GE +L+ R+ D A L CLPP +PR +D +
Sbjct: 63 LHYVRNITDIDDKIIVRAAENGEPIAALTERFTAAMHEDEAALGCLPPDEEPRATDAVPG 122
Query: 138 IKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ +I +I AY + GDV++AV P YG+L+ + L++ RAGER+AV+ K +P D
Sbjct: 123 MIALIETLIKKGHAYAADNGDVYYAVRSFPGYGKLANRSLDDLRAGERIAVNEAKNDPLD 182
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GEPSWDSPWG GRPGWHIECS MSA L FDIHGGG+DL FPHHE EIA
Sbjct: 183 FVLWKAAKPGEPSWDSPWGQGRPGWHIECSVMSAAALGEHFDIHGGGMDLKFPHHECEIA 242
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AC +V+YW+HNG V N+EKMSKSLGNFFT+R + + Y LR F++ +HYR
Sbjct: 243 QSEGACGHQHVNYWLHNGFVQINDEKMSKSLGNFFTVRDVLKHYDGETLRTFILGSHYRG 302
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PLNYS L A + +Y L P TA + F
Sbjct: 303 PLNYSDTALAEAKKMLTRLYTALDK-----QPLDGALDTAAVAA------------FEEA 345
Query: 377 MSDDLNTSHILTGAFQDALKFINSS 401
M+DD+NT F D + INS
Sbjct: 346 MNDDINTPKAFAVLF-DLARRINSG 369
>gi|423138995|ref|ZP_17126633.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|379051549|gb|EHY69440.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
Length = 461
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 229/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHRDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEITRILIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + +P AR A D N
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFN 351
>gi|421617568|ref|ZP_16058556.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri KOS6]
gi|409780556|gb|EKN60185.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri KOS6]
Length = 461
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 181/368 (49%), Positives = 228/368 (61%), Gaps = 17/368 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L IYN++T+ KE F P+ KV MYVCG+T YD H+GHAR V+FD++ R+L H
Sbjct: 1 MALSIYNTLTKSKEAFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVITRWLRHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN TD+DDKIIRRA++ GE +L R D A L L P +PR +DH+
Sbjct: 61 DVTYVRNITDIDDKIIRRASENGEPFQALVERMIAAMHEDEARLNVLRPDLEPRATDHIA 120
Query: 137 QIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+ MI +I AY GDV++ V K YG+LS +++E+ + G R+ VD K +P
Sbjct: 121 GMHAMIQTLIGKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AK GEPSWDSPWG GRPGWHIECS MS L FDIHGGG DL+FPHHENEI
Sbjct: 181 DFVLWKGAKPGEPSWDSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA + WMH G V + EKMSKSLGNFFTIR++ E+YHP +R+ L+S+HYR
Sbjct: 241 AQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SP+NYS L A A+ Y L+ L Q G A + + F A
Sbjct: 301 SPINYSEESLKEAKGALERFYNGLK----GLPEAQAAGGEAFV------------ERFGA 344
Query: 376 RMSDDLNT 383
M DD N+
Sbjct: 345 AMDDDFNS 352
>gi|319638892|ref|ZP_07993650.1| cysteinyl-tRNA synthetase [Neisseria mucosa C102]
gi|317399796|gb|EFV80459.1| cysteinyl-tRNA synthetase [Neisseria mucosa C102]
Length = 473
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 238/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F+PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFSPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGDLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 ---NDYTSRFYAAMNDDFGTVEAVAVLFE 379
>gi|212711245|ref|ZP_03319373.1| hypothetical protein PROVALCAL_02317 [Providencia alcalifaciens DSM
30120]
gi|212685974|gb|EEB45502.1| hypothetical protein PROVALCAL_02317 [Providencia alcalifaciens DSM
30120]
Length = 462
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 255/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD + RYL +L +V
Sbjct: 2 LQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E+ L+ R E D L L P +PR + H+ +I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVEELTTRMLAEMHKDFDALNILRPDSEPRATRHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V+ P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTESLIERGHAYVADNGDVMFEVKTDPSYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + E Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ +Y L+ + + +P A I K R F M
Sbjct: 302 LNYTEENLKQARTALERLYTALRGTDKSATP-------------AGGEIYKSR--FCEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A LN LK + +++ + +++E+ ++LGL
Sbjct: 347 NDDFNTPEAYSALFDMA-----RELNRLKTEN--------MDAANGMAAQLRELAKVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|397666931|ref|YP_006508468.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
gi|395130342|emb|CCD08580.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
Length = 456
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 181/379 (47%), Positives = 244/379 (64%), Gaps = 19/379 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YNS+T++KE F + GK+GMYVCG+T YD HLGHAR+ V+FD++ RYL +V
Sbjct: 2 LHLYNSLTRKKEPFISLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA++ G + L+ +Y D L LPP ++PR + H+E I
Sbjct: 62 TYVRNITDIDDKIIARASERGVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I +++ AYV E GDV + V+ P YG+LS + +E +G RV + KR+P DF
Sbjct: 122 IRLIQRLLEKGNAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEPSW SPWG GRPGWHIECSAM+ H L +FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKKAKPGEPSWHSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +YW+H G + N EKM+KS+GNF+TI + + +HP +R+FL+S+HYRSP
Sbjct: 242 SEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
LNYS L +A A+ +YQ ++D + A S E+ +++F+
Sbjct: 302 LNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEY----------------WQEQFNQ 345
Query: 376 RMSDDLNTSHILTGAFQDA 394
M+DD NT L+ FQ A
Sbjct: 346 AMNDDFNTPVALSILFQLA 364
>gi|54308291|ref|YP_129311.1| cysteinyl-tRNA synthetase [Photobacterium profundum SS9]
gi|61216519|sp|Q6LT67.1|SYC1_PHOPR RecName: Full=Cysteine--tRNA ligase 1; AltName: Full=Cysteinyl-tRNA
synthetase 1; Short=CysRS 1
gi|46912719|emb|CAG19509.1| putative cysteinyl-tRNA synthetase [Photobacterium profundum SS9]
Length = 464
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 196/421 (46%), Positives = 255/421 (60%), Gaps = 24/421 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PI GK+GMYVCGVT YDL H+GH R VSFD++ RYL + ++
Sbjct: 2 LKIYNSLTKQKEEFKPIQPGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCESLTERLIGEMHKDFDALGMKRPDIEPRATEFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I AYV GDV F V K YGRLS Q L+ +AG RV +D KR+P DF
Sbjct: 122 IILCERLIERGFAYVASNGDVMFEVSKFEEYGRLSRQDLDQLQAGARVDIDMAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWG GRPGWHIECSAM++ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y ++R+FL+S HYRS
Sbjct: 242 SCCATGSQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLAHYDAESVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y +L+ ++ TA+ E+ + + F A M
Sbjct: 302 LNYSEDNLKQARSALERLYTSLRGLDL----------TAQAE-GGEEFVTR----FTASM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + + +L ++E+ ILGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REINRLKADETIANNIVQASALGA---RLRELADILGL 398
Query: 438 L 438
L
Sbjct: 399 L 399
>gi|410088151|ref|ZP_11284848.1| Cysteinyl-tRNA synthetase [Morganella morganii SC01]
gi|409765456|gb|EKN49568.1| Cysteinyl-tRNA synthetase [Morganella morganii SC01]
Length = 462
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 253/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD + RYL H +V
Sbjct: 2 LKIYNTLSRQKEEFKPINPGKIGMYVCGITVYDLCHIGHGRTFVAFDTIVRYLRHAGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y+RN TDVDDKII+RAN+ E L +R E D + + P +PR + H+++I
Sbjct: 62 NYIRNITDVDDKIIKRANENNETCDQLVDRMVAEMHRDFDAMNLMRPDSEPRATHHIKEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +++ AYV + GDV F + P YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEITQLLLDRGHAYVADNGDVMFDISSDPEYGLLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGAGRPGWHIECSAMNSKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y P +R+FL+SAHYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLGYYDPETVRYFLLSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ Y L+ + K A + E+ N+ RD M
Sbjct: 302 LNYTEENLKQARTALERFYTALRGTD----------KDAAV-VVNEEFANRFRDA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A LN LK++ + + + +++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----RELNRLKQED--------MTAANGLAAQLRQLAGVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|119945844|ref|YP_943524.1| cysteinyl-tRNA synthetase [Psychromonas ingrahamii 37]
gi|119864448|gb|ABM03925.1| cysteinyl-tRNA synthetase [Psychromonas ingrahamii 37]
Length = 461
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 192/432 (44%), Positives = 259/432 (59%), Gaps = 25/432 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F P++ GKVGMYVCG+T YD H+GH R V+FD + RYL +
Sbjct: 2 LKIYNSLTRQKEPFKPLIPGKVGMYVCGITIYDYCHIGHGRTFVAFDTVARYLRFSGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y+RN TDVDDKII+RA + E+ L++R+ + D L L P +PRV+DHM ++
Sbjct: 62 NYIRNITDVDDKIIKRAAENNESCDQLTSRFTEAMHQDFDALFMLRPDLEPRVTDHMPEV 121
Query: 139 KDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+MI ++I AYV E DV FAV+ YG+LSGQ LE RAG RV V+ KRNP DF
Sbjct: 122 IEMIKKLIAKGHAYVAENNDVLFAVDSFKEYGQLSGQNLEMLRAGSRVEVEESKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP W SPWG GRPGWHIECSAM+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMAKPAEPFWTSPWGNGRPGWHIECSAMNHKHLGEVFDIHGGGSDLAFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + KMSKSL NFFTI+++ + + ++R+FLIS HYRS
Sbjct: 242 SCCAHHGQYVNTWMHSGMVQVDKVKMSKSLKNFFTIKEVLKFFDSESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFH--- 374
LNYS L A ++ +Y +++D F + + N + I + D+F+
Sbjct: 302 LNYSEDNLKQARASLERLYNSVRDL-----TFSKDTPLDKTNLHYQQFIKAMDDDFNTPG 356
Query: 375 --------ARMSDDLNTSHI--------LTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 418
A+ + L S+I L + L +N S + K +++++I
Sbjct: 357 ALAVLFDLAKEINRLKQSNIKQASLSAGLLVTLANVLGLLNQSAEQFLQGDEKNEEVAMI 416
Query: 419 ESLRKIENEVKE 430
E+L K N+ ++
Sbjct: 417 EALIKQRNDARQ 428
>gi|24111894|ref|NP_706404.1| cysteinyl-tRNA synthetase [Shigella flexneri 2a str. 301]
gi|30062010|ref|NP_836181.1| cysteinyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|415859298|ref|ZP_11533573.1| cysteinyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|417731992|ref|ZP_12380663.1| cysteinyl-tRNA synthetase [Shigella flexneri 2747-71]
gi|417741957|ref|ZP_12390509.1| cysteinyl-tRNA synthetase [Shigella flexneri 2930-71]
gi|61216306|sp|Q83M27.1|SYC_SHIFL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|24050695|gb|AAN42111.1| cysteine tRNA synthetase [Shigella flexneri 2a str. 301]
gi|30040254|gb|AAP15987.1| cysteine tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|313646855|gb|EFS11312.1| cysteinyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|332761515|gb|EGJ91797.1| cysteinyl-tRNA synthetase [Shigella flexneri 2747-71]
gi|332768439|gb|EGJ98623.1| cysteinyl-tRNA synthetase [Shigella flexneri 2930-71]
Length = 461
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 228/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRN DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNRMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|421907821|ref|ZP_16337690.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha704]
gi|393291136|emb|CCI73697.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha704]
Length = 699
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 237/389 (60%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 469
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 470 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 530 VVRFFILRAHYRSPLNYSDTHLDDAKGALTRLYTTLKNTPAAEFDLSENA---------- 579
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 580 ---NGYTRRFYAAMNDDFGTVEAVAVLFE 605
>gi|160872079|ref|ZP_02062211.1| cysteinyl-tRNA synthetase [Rickettsiella grylli]
gi|159120878|gb|EDP46216.1| cysteinyl-tRNA synthetase [Rickettsiella grylli]
Length = 466
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 181/397 (45%), Positives = 250/397 (62%), Gaps = 16/397 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++TQ+KE F P++ KVGMYVCG+T YD H+GHAR V FD++ RYL+ +V
Sbjct: 2 LKIYNTLTQKKEAFKPMIAKKVGMYVCGMTVYDFCHIGHARVVVVFDVILRYLKMQGYQV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y+RN TD+DDKII+RA + E+P L+ R + D L LPP +P+ +D + I
Sbjct: 62 NYIRNITDIDDKIIKRAQENNESPFELTQRMIKAMHEDFNRLNTLPPNAEPKATDAIVYI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++++ AY E GD+ F V+K YG L+ Q ++ R G RVAVD K++P DF
Sbjct: 122 IALIQRLVDKAYAYRSENGDICFDVKKFKTYGDLAHQNVQKLRRGLRVAVDITKKDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK+GEPSW+SPWGPGRPGWHIECSAMS L FDIHGGG+DL+FPHH+NEIAQ
Sbjct: 182 VLWKKAKSGEPSWESPWGPGRPGWHIECSAMSMAALGEHFDIHGGGLDLVFPHHQNEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S V+ W+H G V + +KMSKSLGNFFT+R + ++Y +R+FLIS+HYRSP
Sbjct: 242 SEGVTDKKFVNTWIHVGFVQIDRQKMSKSLGNFFTLRDVLKQYPAEVVRYFLISSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+ YS+ L +A A+ +Y +L+ V P + E+ + +++F M
Sbjct: 302 IQYSLENLQAAQAALQRLYTSLRGL-VGKGPQK---------FVLEESSKEYQEKFEHAM 351
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 414
+DD NT L F+ A + +N L++ K Q
Sbjct: 352 NDDFNTPDALAILFELARR-----INRLRETNSKHAQ 383
>gi|146310641|ref|YP_001175715.1| cysteinyl-tRNA synthetase [Enterobacter sp. 638]
gi|145317517|gb|ABP59664.1| cysteinyl-tRNA synthetase [Enterobacter sp. 638]
Length = 465
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 192/423 (45%), Positives = 254/423 (60%), Gaps = 29/423 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
L LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L
Sbjct: 4 LMLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRFLGY 63
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+ YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+
Sbjct: 64 TLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIH 123
Query: 137 QIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+I ++ ++I AYV GDV F+V P YG+LS Q LE +AG RV V KRNP
Sbjct: 124 EIIEITEKLIERGHAYVASNGDVMFSVPTDPGYGQLSRQDLEQLQAGARVDVVDVKRNPM 183
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEI
Sbjct: 184 DFVLWKTSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEI 243
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A V+YWMH+G V + EKMSKSL NFFT+R + + Y +R+FL+S HYR
Sbjct: 244 AQSTCAHGGEYVNYWMHSGMVMVDREKMSKSLDNFFTVRDVLKYYDAETVRYFLMSGHYR 303
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
S LNYS L A A+ +Y ++ + +++P AR F
Sbjct: 304 SQLNYSEENLKQARSALERLYIAVRGTDKSVAPAGGEAFEAR---------------FID 348
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F A +N LK + + + + + ++++ +L
Sbjct: 349 VMNDDFNTPEAYSVLFDMA-----REINRLKVED--------VSAANALASHLRKLAAVL 395
Query: 436 GLL 438
GLL
Sbjct: 396 GLL 398
>gi|386818264|ref|ZP_10105482.1| cysteinyl-tRNA synthetase [Thiothrix nivea DSM 5205]
gi|386422840|gb|EIJ36675.1| cysteinyl-tRNA synthetase [Thiothrix nivea DSM 5205]
Length = 461
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 186/395 (47%), Positives = 248/395 (62%), Gaps = 24/395 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYNS+T+QKE F PI +V MYVCG+T YD HLGHAR V FD +YRYL+ V
Sbjct: 2 LHIYNSLTRQKETFHPIHPRQVFMYVCGMTVYDYCHLGHARVMVVFDTVYRYLKASGYLV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE +L+ R+ D A L L P +PR + ++ ++
Sbjct: 62 QYVRNITDIDDKIIKRAAENGEPIEALTARFIDAMHEDEAALNVLRPDDEPRATSNIPEM 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +++ AY GDV++ V K YG+LSG++LE+ RAGERVAVD K +P DF
Sbjct: 122 LAMIQTLLDKGLAYQGSNGDVYYDVSKFDGYGKLSGRKLEDMRAGERVAVDEIKDDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKA+K GEP+WD+PWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKASKPGEPAWDAPWGAGRPGWHIECSAMSQKLLGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S +V+YWMHNG + N+EKMSKSLGNFFTIR++ + Y A+R F++++HYRS
Sbjct: 242 SEGCTGHKHVNYWMHNGFIRVNDEKMSKSLGNFFTIREVLQHYRAEAVRFFILNSHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
LNY+ QLD+A+ ++ +Y L+ E + + E+ + F A
Sbjct: 302 LNYATDQLDAANASLSRLYTALRGLPEAGAANYTEYER-----------------RFDAA 344
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 411
M DD NT + F+ + +N ++ +Q +
Sbjct: 345 MDDDFNTPEAIAVMFE-----LARDINRIRTEQSE 374
>gi|423073155|ref|ZP_17061898.1| cysteine--tRNA ligase [Desulfitobacterium hafniense DP7]
gi|361855985|gb|EHL07919.1| cysteine--tRNA ligase [Desulfitobacterium hafniense DP7]
Length = 477
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 178/385 (46%), Positives = 245/385 (63%), Gaps = 2/385 (0%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L+++N+M+ QKE F P GKVGMY CG T Y+ H+G+ R V FD++ RYL +
Sbjct: 1 MALRLFNTMSHQKEEFKPREEGKVGMYTCGPTVYNYFHVGNGRMLVVFDMIRRYLLYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+V+NFTD+DDKII+R + G +PL L+ Y EY D A L +P + P+ +DH+
Sbjct: 61 DVTFVQNFTDIDDKIIKRGQEEGRDPLELAQDYIGEYFKDAAALNLMPASIHPKATDHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ ++I + AY V+GDV+FAV+K P YG+LSG+ LE+ +AG RV V RK+NP D
Sbjct: 121 EMIEIIKGLEEQGLAYAVDGDVYFAVDKLPAYGKLSGRTLEDMQAGARVEVGERKQNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECSAMS YL S FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKNAKPGEPFWESPWGKGRPGWHIECSAMSLKYLGSGFDIHGGGGDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
Q+ + YWMHN +T N +KMSKSLGNFFT+R+I E + +R +L+ HYR
Sbjct: 241 QAEGYLHGETFARYWMHNAFLTINQQKMSKSLGNFFTVREILEYFPGEVIRFYLLGTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPL++ L A + + +++ + AL ++ A + R EF
Sbjct: 301 SPLDFDDENLRMAQKGLERLQTSIRLADEALGRQGQNSADAAPEQKLRAAAEEARREFEE 360
Query: 376 RMSDDLNTSHILTGAFQDALKFINS 400
M DD N++ + +F + K IN+
Sbjct: 361 AMDDDFNSA-LAYASFFELGKAINA 384
>gi|421539054|ref|ZP_15985225.1| cysteine--tRNA ligase [Neisseria meningitidis 93003]
gi|402315166|gb|EJU50732.1| cysteine--tRNA ligase [Neisseria meningitidis 93003]
Length = 473
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 239/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F+PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|298369710|ref|ZP_06981027.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
gi|298282267|gb|EFI23755.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
Length = 473
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 237/389 (60%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE FTPI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFTPINPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAVAFELSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|451965977|ref|ZP_21919232.1| cysteinyl-tRNA synthetase [Edwardsiella tarda NBRC 105688]
gi|451315226|dbj|GAC64594.1| cysteinyl-tRNA synthetase [Edwardsiella tarda NBRC 105688]
Length = 461
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 188/366 (51%), Positives = 229/366 (62%), Gaps = 16/366 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCGVT YDL H+GH R V FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVCFDVVARYLRYLGYTL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E+ L+ R E D L P +PR + H+ +I
Sbjct: 62 KYVRNVTDVDDKIIKRALENKESCEQLTERMLAEMHRDFDALNIARPDVEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV GDV FAV+ P+YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IALVEQLIARGHAYVASNGDVMFAVDTDPDYGLLSRQDLEQLQAGARVEVAEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGAYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ G A PAA++ F A M
Sbjct: 302 LNYSEENLKQARAALERLYTALR------------GTDATAQPAADEAFEG---RFRAAM 346
Query: 378 SDDLNT 383
DD NT
Sbjct: 347 DDDFNT 352
>gi|365873642|ref|ZP_09413175.1| cysteinyl-tRNA synthetase [Thermanaerovibrio velox DSM 12556]
gi|363983729|gb|EHM09936.1| cysteinyl-tRNA synthetase [Thermanaerovibrio velox DSM 12556]
Length = 467
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 185/422 (43%), Positives = 260/422 (61%), Gaps = 13/422 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ I+N +T +KE F P+ GKV YVCG T YD H+G+AR + FD++ RYLE+L
Sbjct: 1 MAFNIFNDLTNKKEPFVPVEEGKVRFYVCGPTVYDYFHIGNARPFIVFDVMRRYLEYLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV+NFTD+DDK+I RAN++G L++++ + Y D L T P+ ++ +
Sbjct: 61 QVKYVQNFTDIDDKMINRANEMGITVKELADKFIEAYYQDADALGIKRATVNPKATEEIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I ++I +I AY V+GDV+F V+ P YG+L Q LE +AG R+ VD RKR+P D
Sbjct: 121 HIIELIEILIRKGHAYQVDGDVYFDVKSYPAYGKLIRQDLEELQAGARIDVDPRKRHPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA K GEP+W+SPWG GRPGWHIECSAM H+L DIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKAQKPGEPAWESPWGLGRPGWHIECSAMCRHHLGETIDIHGGGCDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YW+HNG++ + EKMSKSLGNF T R + ++HPLA+R F++SAHYRS
Sbjct: 241 QSEAATGKPFVRYWVHNGYLMIDKEKMSKSLGNFMTARDVISKFHPLAVRLFMLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S L A A+ + + AL G + + A + R++F
Sbjct: 301 PINFSEDNLRQAQGALERLRNGWAEISFALKRQDSGGISEELRSAVRES----REQFLNA 356
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DDLNT+ + F I S+ + + + P +E+L + +++V RI+G
Sbjct: 357 MDDDLNTAEAIGAVF----ALIRSANSHIGSQSPLD-----LEALNEAARFLQDVDRIMG 407
Query: 437 LL 438
++
Sbjct: 408 II 409
>gi|374298149|ref|YP_005048340.1| cysteinyl-tRNA synthetase [Clostridium clariflavum DSM 19732]
gi|359827643|gb|AEV70416.1| cysteinyl-tRNA synthetase [Clostridium clariflavum DSM 19732]
Length = 467
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 171/387 (44%), Positives = 254/387 (65%), Gaps = 8/387 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN++T++KE F P+ +V MY CG T Y+ H+G+AR + FD + RYLE+ +V
Sbjct: 1 MKIYNTLTRKKEEFVPLDEKEVKMYSCGPTVYNYFHIGNARPFIIFDTVRRYLEYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I+RAN+ G L+ ++ EY +D L T P+ +++++ I
Sbjct: 61 KFVQNFTDIDDKMIKRANEEGITVKELAEKFINEYFIDAEGLGIGKATVHPKATENIDAI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++I ++ + Y V+GDV+F+ +K YG+LS Q L++ G R+ VD RK++P DFA
Sbjct: 121 IELIKKLEDKGFVYNVDGDVYFSTKKFKEYGKLSHQSLDDLELGARIDVDERKQDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+WDSPWG GRPGWHIECSAM+ YL DIH GG DL+FPHHENEIAQS
Sbjct: 181 VWKAQKPGEPAWDSPWGKGRPGWHIECSAMANKYLGETIDIHSGGQDLVFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA YWMHNG + +N+KMSKS GNFFT+R+I +++ +R F++SAHYRSP+
Sbjct: 241 EAATGKPFARYWMHNGFINVDNKKMSKSEGNFFTVREIAQKFDYEVIRFFMLSAHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK---LRDEFHA 375
N+S+ L+ A +++ IY +C L +EH + ++ ++ NK L+ +F
Sbjct: 301 NFSLELLEQAQNSLERIY----NCIDNLLYLREHAEDREMSEVEKEFQNKLLGLKGKFIE 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSL 402
M DD+NT+ + F D +K +NS++
Sbjct: 357 AMDDDINTADAIAAIF-DIVKEVNSNI 382
>gi|417363990|ref|ZP_12137052.1| Cysteinyl-tRNA synthetase, partial [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|353598700|gb|EHC55077.1| Cysteinyl-tRNA synthetase, partial [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
Length = 459
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 178/349 (51%), Positives = 228/349 (65%), Gaps = 1/349 (0%)
Query: 20 KIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVT 79
KI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 1 KIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLK 60
Query: 80 YVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIK 139
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 61 YVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEII 120
Query: 140 DMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 121 ELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQS
Sbjct: 181 LWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS L
Sbjct: 241 TCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
NYS L A ++ +Y L+ + + +P AR A D N
Sbjct: 301 NYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFN 349
>gi|168187713|ref|ZP_02622348.1| cysteinyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
gi|169294420|gb|EDS76553.1| cysteinyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
Length = 466
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 175/411 (42%), Positives = 256/411 (62%), Gaps = 14/411 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K++N+MT+QKE F PI G+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 1 MKLFNTMTRQKEEFKPIKDGQVSMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I++AN+ L +R+ QEY D L T PR +++M++I
Sbjct: 61 NFIQNFTDIDDKMIKKANEENITVKELGDRFIQEYYKDADGLNIKRATVNPRATEYMDEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ + +I+ AY V GDV+F ++ YG+LSGQ L++ +AG R+++D RK++P DFA
Sbjct: 121 IEFVRDLIDKGYAYEVNGDVYFNTKQFKEYGKLSGQNLDDLQAGARISIDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K GEPSWD PWG GRPGWHIECS M+ L DIH GG DL+FPHHENEIAQS
Sbjct: 181 IWKSEKPGEPSWDCPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YWMH+ ++ +N+KMSKSL NFFT R+I E+Y +R F++SAHYR+PL
Sbjct: 241 EARNGKAFAHYWMHSAYLNIDNKKMSKSLNNFFTTREILEKYDAEVVRLFMLSAHYRTPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED------CINKLRDE 372
N+S L SA + +Y + + E L +I+ ED +N +++
Sbjct: 301 NFSNELLQSAKASNERLYNAIGNLERLLDE-------VKIDKITEDEKEYVKNLNSYKEK 353
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+ +M DD NT+ + F D +K IN+++N K+ + L LI L K
Sbjct: 354 YIEKMDDDFNTADAIAVIF-DLVKDINTNINTESSKELVEYSLELIRELGK 403
>gi|378578319|ref|ZP_09826994.1| cysteinyl-tRNA synthetase [Pantoea stewartii subsp. stewartii
DC283]
gi|377818599|gb|EHU01680.1| cysteinyl-tRNA synthetase [Pantoea stewartii subsp. stewartii
DC283]
Length = 461
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 193/423 (45%), Positives = 256/423 (60%), Gaps = 18/423 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE FTPI GK+GMYVCG+T YDL H+GH R V+FD++ RYL ++ +V
Sbjct: 2 LKIYNTLSRQKEEFTPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRYVGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ +L+NR E D L LPP +PR + H+ I
Sbjct: 62 NYVRNITDIDDKIIKRANENGESIETLTNRMIGEMHSDFDALGILPPDVEPRATRHIPDI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V +YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IALVETLIARGHAYVADNGDVMFDVLSDVDYGALSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KA EPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKADEPSWPSPWGNGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFT+R + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLRHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK--------- 368
LNY L+ A A+ +Y L+ + ++ AR A D N
Sbjct: 302 LNYGEDNLNQARAALERLYTALRHTDRTVAASGGEAFEARFREAMNDDFNTPEAYSVLFD 361
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
+ E + S+D+ T+ L L+ I L +L+ ++ ++ L S + ++EV
Sbjct: 362 MAREVNRLKSEDMTTASALAA----KLREIADVLGILQ----QEPEVFLQSSAQGNDDEV 413
Query: 429 KEV 431
E+
Sbjct: 414 AEI 416
>gi|359437267|ref|ZP_09227337.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20311]
gi|359446712|ref|ZP_09236363.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20439]
gi|392554148|ref|ZP_10301285.1| cysteinyl-tRNA ligase [Pseudoalteromonas undina NCIMB 2128]
gi|358028091|dbj|GAA63586.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20311]
gi|358039518|dbj|GAA72612.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20439]
Length = 459
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 225/350 (64%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T+QKE F P+V GK+ MYVCG+T YD H+GHAR V FD++ RYL HL ++
Sbjct: 2 VQIYNTLTRQKEQFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RAN+ GE L+ R + D L L P +P V+ HM++I
Sbjct: 62 KYVRNITDVDDKIIKRANENGEAINDLTVRMTKAMHEDFDSLNMLRPDVEPTVTGHMDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I AYV +GDV F V YG LS Q L ++G RV V K +P DF
Sbjct: 122 IAMVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSL NFFT+R++ ++Y ++R+FLIS HYRS
Sbjct: 242 SCCANNGQYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKQYDAESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS LD A ++ IY L+ E + + A+ A D N
Sbjct: 302 LNYSQENLDQARSSLERIYTALRGVEPVECELEGNEYVAKFRKAMNDDFN 351
>gi|416214986|ref|ZP_11623197.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240013]
gi|325143495|gb|EGC65816.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240013]
Length = 473
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 237/389 (60%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|392977950|ref|YP_006476538.1| cysteinyl-tRNA ligase [Enterobacter cloacae subsp. dissolvens SDM]
gi|392323883|gb|AFM58836.1| cysteinyl-tRNA ligase [Enterobacter cloacae subsp. dissolvens SDM]
Length = 461
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 196/421 (46%), Positives = 250/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L +
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIVEMHKDFDALNILRPDSEPRATHHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+ ++I AYV + GDV F+V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IDITEKLIARGHAYVADNGDVMFSVPTDPTYGSLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + ++ AR F M
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSVEAAGGEAFEAR---------------FVEVM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +L LRK+ + +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKSEDMAAAN-ALASHLRKLSS-------VLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|254804107|ref|YP_003082328.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha14]
gi|254667649|emb|CBA03462.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha14]
Length = 475
Score = 361 bits (927), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 189/395 (47%), Positives = 244/395 (61%), Gaps = 31/395 (7%)
Query: 15 MDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHL 74
M++T IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L
Sbjct: 1 MNMT-TIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREC 59
Query: 75 KCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDH 134
+TYVRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ +++
Sbjct: 60 GYPLTYVRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATEN 119
Query: 135 MEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRN 193
+ Q+ MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+
Sbjct: 120 IPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRD 179
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHEN
Sbjct: 180 PLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHEN 239
Query: 254 EIAQSCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 297
EIAQS A S+V YW+HNG + + EKMSKSLGNFFTIR++
Sbjct: 240 EIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVL 299
Query: 298 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 357
++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++ +P E G +
Sbjct: 300 KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKN-----TPAAEFGLS-- 352
Query: 358 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+ N F+A M+DD T + F+
Sbjct: 353 ------ENANDYTRRFYAAMNDDFGTVEAVAVLFE 381
>gi|425744739|ref|ZP_18862794.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-323]
gi|425490335|gb|EKU56635.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-323]
Length = 473
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 183/421 (43%), Positives = 261/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G++ MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII RAN+ GE+ L+ R+ D A+L C P P+ +++++Q++
Sbjct: 66 IRNITDIDDKIIARANENGESIQQLTARFIDAMNEDAANLGCAAPDEAPKATEYIDQMQS 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI +++ AY GDV+F V K YGRLSG++LE+ +AG ERV V+ K++P DF
Sbjct: 126 MINTLVDKGAAYPSSNGDVYFEVSKFDKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A A+ Y + + +Q+ I ++ + + F+ M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFK-------AYQQVYGQKTIETLEQNFVER----FNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ +Q +L +LR + + ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQAEQATALYSTLRHLTH-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|385329332|ref|YP_005883635.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha710]
gi|308390183|gb|ADO32503.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha710]
Length = 699
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 237/389 (60%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 469
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 470 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 530 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---------- 579
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 580 ---NGYTRRFYAAMNDDFGTVEAVAVLFE 605
>gi|6599476|gb|AAF18750.1|AF163997_1 cysteinyl-tRNA synthetase [Methanococcus maripaludis]
Length = 476
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 173/378 (45%), Positives = 239/378 (63%), Gaps = 8/378 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YN++T+++E F + + +V MYVCG YD +HLGH R VS D++ RYLEH+ V
Sbjct: 2 LKVYNTLTRKEEEFKTLNKNEVKMYVCGPPVYDTTHLGHGRTYVSLDIIRRYLEHIGYTV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
V NFTD+DDKII+RA + G++P +S ++ + +L DMA L+ P P+V++H+ +I
Sbjct: 62 NLVINFTDIDDKIIKRAYEKGKDPKEISEQFIKVFLDDMATLKVKPADIYPKVTEHISEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I ++I AY E V+F V+K NYG+LS LE+ +G RV +K+N DFA
Sbjct: 122 IAFIERLIEKGFAYKTEDGVYFEVKKFKNYGKLSNINLEDLVSGARVETSEKKKNQKDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP W+SP+G GRPGWHIECSAMS+ YL +FDIHGGG DL FPHHENEIAQS
Sbjct: 182 LWKTAKPGEPKWESPFGKGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V+YW+H G V N EKMSKSLGNF TI I++ Y P LR F I HYRSP+
Sbjct: 242 SAYSGKDWVNYWIHTGFVMVNGEKMSKSLGNFITIGDISKEYSPEILRFFFIQRHYRSPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE----DCINKLRDEFH 374
+Y+ ++ + + IY +++ ++L E + +RI E D + ++ F+
Sbjct: 302 DYTAESMNHVKNNLEKIYNVIENIRISL----EKSEKSRIWGENEFLLYDILKNSKNNFY 357
Query: 375 ARMSDDLNTSHILTGAFQ 392
M+ D NT L F+
Sbjct: 358 NAMNSDFNTVEALKSVFE 375
>gi|421566414|ref|ZP_16012164.1| cysteine--tRNA ligase [Neisseria meningitidis NM3081]
gi|402340327|gb|EJU75529.1| cysteine--tRNA ligase [Neisseria meningitidis NM3081]
Length = 473
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 238/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|385852162|ref|YP_005898677.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M04-240196]
gi|325206985|gb|ADZ02438.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M04-240196]
Length = 473
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 237/389 (60%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|421555761|ref|ZP_16001686.1| cysteine--tRNA ligase [Neisseria meningitidis 98008]
gi|402328737|gb|EJU64103.1| cysteine--tRNA ligase [Neisseria meningitidis 98008]
Length = 473
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 237/389 (60%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 ---NGYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|416165303|ref|ZP_11607427.1| cysteinyl-tRNA synthetase [Neisseria meningitidis N1568]
gi|433474412|ref|ZP_20431764.1| cysteine--tRNA ligase [Neisseria meningitidis 97021]
gi|433482842|ref|ZP_20440092.1| cysteine--tRNA ligase [Neisseria meningitidis 2006087]
gi|433484856|ref|ZP_20442070.1| cysteine--tRNA ligase [Neisseria meningitidis 2002038]
gi|433487087|ref|ZP_20444274.1| cysteine--tRNA ligase [Neisseria meningitidis 97014]
gi|433537689|ref|ZP_20494180.1| cysteine--tRNA ligase [Neisseria meningitidis 77221]
gi|325127358|gb|EGC50293.1| cysteinyl-tRNA synthetase [Neisseria meningitidis N1568]
gi|432207068|gb|ELK63063.1| cysteine--tRNA ligase [Neisseria meningitidis 97021]
gi|432213680|gb|ELK69591.1| cysteine--tRNA ligase [Neisseria meningitidis 2006087]
gi|432219093|gb|ELK74941.1| cysteine--tRNA ligase [Neisseria meningitidis 2002038]
gi|432220072|gb|ELK75899.1| cysteine--tRNA ligase [Neisseria meningitidis 97014]
gi|432270438|gb|ELL25576.1| cysteine--tRNA ligase [Neisseria meningitidis 77221]
Length = 473
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 237/389 (60%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|421562116|ref|ZP_16007952.1| cysteine--tRNA ligase [Neisseria meningitidis NM2657]
gi|254671629|emb|CBA09335.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha153]
gi|402335505|gb|EJU70770.1| cysteine--tRNA ligase [Neisseria meningitidis NM2657]
Length = 473
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 185/389 (47%), Positives = 240/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE FTPI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFTPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+ + F+ M+DD +T + F+
Sbjct: 351 EAGDDYTRRFYVAMNDDFDTVKAVAVLFE 379
>gi|315127193|ref|YP_004069196.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
gi|315015707|gb|ADT69045.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
Length = 459
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 225/350 (64%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T+QKE F P+V GK+ MYVCG+T YD H+GHAR V FD++ RYL HL ++
Sbjct: 2 VQIYNTLTRQKEEFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RAN+ GE L+ R + D L L P +P V+ HM++I
Sbjct: 62 KYVRNITDVDDKIIKRANENGEAINDLTVRMTKAMHEDFDSLNMLRPDIEPTVTGHMDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I AYV +GDV F V YG LS Q L ++G RV V K +P DF
Sbjct: 122 IAMVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSL NFFT+R++ ++Y ++R+FLIS HYRS
Sbjct: 242 SCCANNGQYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKQYDAESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS LD A ++ IY L+ E + + A+ A D N
Sbjct: 302 LNYSQENLDQARSSLERIYTALRGVEPVECELEGNEYVAKFRKAMNDDFN 351
>gi|197286005|ref|YP_002151877.1| cysteinyl-tRNA synthetase [Proteus mirabilis HI4320]
gi|227356519|ref|ZP_03840906.1| cysteinyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
gi|425068915|ref|ZP_18472031.1| cysteinyl-tRNA synthetase [Proteus mirabilis WGLW6]
gi|425071558|ref|ZP_18474664.1| cysteinyl-tRNA synthetase [Proteus mirabilis WGLW4]
gi|229470558|sp|B4F1M6.1|SYC_PROMH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|194683492|emb|CAR44297.1| cysteinyl-tRNA synthetase [Proteus mirabilis HI4320]
gi|227163275|gb|EEI48202.1| cysteinyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
gi|404598416|gb|EKA98886.1| cysteinyl-tRNA synthetase [Proteus mirabilis WGLW4]
gi|404598815|gb|EKA99283.1| cysteinyl-tRNA synthetase [Proteus mirabilis WGLW6]
Length = 463
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 249/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI +GK+GMYVCG+T YDL H+GH R V+FD + RYL +L +V
Sbjct: 2 LKIFNTLTRQKEEFKPIHKGKIGMYVCGITIYDLCHIGHGRTFVAFDAITRYLRYLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L+ R E D L L P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNILRPDSEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ +I AYV E GDV FA++ P+YG LS Q LE +AG RV V + KRNP DF
Sbjct: 122 IALTETLIKRGHAYVAENGDVMFAIDTDPDYGLLSRQDLEQLQAGARVEVANVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWTSPWGEGRPGWHIECSAMNGKELGHHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ +Y +L+ G A PA + +F M
Sbjct: 302 LNYTEENLKQARTALERLYTSLR------------GTDANAQPAGGEAFEA---QFIEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F + +N LK +E+ + ++++ ++LGL
Sbjct: 347 NDDFNTPEAYSVLFD-----LAREVNRLKTVN--------MEAANGLAAVLRKLAKVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|188534564|ref|YP_001908361.1| cysteinyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
gi|229558632|sp|B2VBD5.1|SYC_ERWT9 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|188029606|emb|CAO97484.1| Cysteinyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
Length = 462
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 176/351 (50%), Positives = 228/351 (64%), Gaps = 2/351 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI GK+GMYVCG+T YDL H+GH R +FD++ RYL + ++
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE+ L+NR E D A L LPP +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRAQENGESIEQLTNRMIGEMHKDFAALNILPPDLEPRATRHITEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR-KRNPAD 196
+++ ++I + AYV GDV F+V+ P YG LS Q L+ +AG RV V + KRNP D
Sbjct: 122 VELVEKLIAREHAYVASNGDVMFSVDSDPQYGSLSRQDLDQLQAGARVEVAADVKRNPMD 181
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +KA EP W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIA
Sbjct: 182 FVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIA 241
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V+YWMH+G V + EKMSKSL NFFT+R + E Y +R+FL+S HYRS
Sbjct: 242 QSTCAHDGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLEHYDAETVRYFLMSGHYRS 301
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNY L+ A A+ +Y L++ + +P R A +D N
Sbjct: 302 QLNYGEDNLNQARSALERLYIALRNTDTGATPAGGEEFETRFREAMDDDFN 352
>gi|241758928|ref|ZP_04757040.1| cysteine--tRNA ligase [Neisseria flavescens SK114]
gi|241320749|gb|EER56982.1| cysteine--tRNA ligase [Neisseria flavescens SK114]
Length = 477
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 187/389 (48%), Positives = 238/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE FTPI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFTPINPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY V DV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAVNDDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|387126947|ref|YP_006295552.1| cysteinyl-tRNA synthetase [Methylophaga sp. JAM1]
gi|386274009|gb|AFI83907.1| Cysteinyl-tRNA synthetase [Methylophaga sp. JAM1]
Length = 436
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 180/377 (47%), Positives = 244/377 (64%), Gaps = 20/377 (5%)
Query: 42 MYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGEN 101
MYVCG+T YDL H+GHAR V FD++ RYL +VTY+RN TD+DDKII+RA + GE
Sbjct: 1 MYVCGMTVYDLCHVGHARVMVVFDVVTRYLRASGYDVTYIRNITDIDDKIIKRAAENGET 60
Query: 102 PLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFF 160
+L++RY +E D L L P +PR ++ M+ + DMI +I+ AYV E GDV++
Sbjct: 61 IQTLTDRYIKEMHADADALGVLRPDREPRATEAMQPMLDMIQTLIDKGLAYVAENGDVYY 120
Query: 161 AVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPG 220
V + YG+LSG+++++ RAGER+AV+ K +P DF LWKAAK EP+WDSPWGPGRPG
Sbjct: 121 DVSEFSGYGKLSGRQVDDLRAGERIAVNEAKTDPLDFVLWKAAKPEEPAWDSPWGPGRPG 180
Query: 221 WHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNN 280
WHIECSAMSA L FDIHGGG DL FPHHENEIAQS A +V+YWMHNG V ++
Sbjct: 181 WHIECSAMSAECLGHHFDIHGGGQDLQFPHHENEIAQSEGAHGCQSVNYWMHNGFVRIDD 240
Query: 281 EKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQ 340
EKMSKSLGNFFT+R++ +Y A+R+F++ +HYRSPLNY+ QL+ A A+ Y +L+
Sbjct: 241 EKMSKSLGNFFTVREVLAKYPAEAVRYFILMSHYRSPLNYAEDQLEQAKTALTRFYHSLR 300
Query: 341 DCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINS 400
D ++E + A F M DD NT+ L+ L +
Sbjct: 301 DVTPETVSWREDAEFA--------------SRFAEAMDDDFNTALALS-----VLADVRQ 341
Query: 401 SLNMLKKKQPKQQQLSL 417
+LN+ +++ +Q+ L
Sbjct: 342 ALNIAREENDEQKSAYL 358
>gi|332532274|ref|ZP_08408155.1| cysteinyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
gi|332038372|gb|EGI74817.1| cysteinyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
Length = 459
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 187/396 (47%), Positives = 239/396 (60%), Gaps = 23/396 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ IYN++T+QKE F P+V GK+ MYVCG+T YD H+GHAR V FD++ RYL H+ ++
Sbjct: 2 VNIYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ L+ R + D L L P +P V+ HM++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESINDLTVRMTKAMHEDFDSLNMLRPDIEPTVTSHMDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I AYV +GDV F V YG LS Q L ++G RV V K +P DF
Sbjct: 122 IAMVKRLIEKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECS MS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWSSPWGEGRPGWHIECSVMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSL NFFT+R++ + Y ++R+FLIS HYRS
Sbjct: 242 SCCANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKAYDAESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI-NKLRDEFHAR 376
LNYS LD A ++ IY L+D + P D N+ +F
Sbjct: 302 LNYSQENLDQARSSLERIYTALRD----------------VVPVECDLEGNEFVAKFRKA 345
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 412
M+DD NT L F+ + LN +K+ Q
Sbjct: 346 MNDDFNTPEALPVLFE-----LAKELNRVKESDAGQ 376
>gi|407688198|ref|YP_006803371.1| cysteinyl-tRNA ligase [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|407291578|gb|AFT95890.1| cysteinyl-tRNA ligase [Alteromonas macleodii str. 'Balearic Sea
AD45']
Length = 460
Score = 361 bits (926), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 191/421 (45%), Positives = 252/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN+ T++K F P+ GKVG+YVCG+T YDLSH+GHAR +SFD+L RY+ HL +V
Sbjct: 2 LHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYMRHLGLDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII RAN+ GE+ +L+ R D A + L P +P VS HM++I
Sbjct: 62 KYVRNITDIDDKIIARANENGESFEALTARTIAMMHEDFAAINLLEPDVEPTVSGHMDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++I ++++ AY + GDV F V K +YG+LS Q L+ +AG RV V + K +P DF
Sbjct: 122 IEIIQRLMDKGYAYQAKSGDVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAAGKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK K GEP+W SPWG GRPGWHIECSAM+ +L + FDIHGGG DL FPHHENE+AQ
Sbjct: 182 VLWKTTKPGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH G V N+EKMSKSLGNFFT+R + + + LR FL+SAHYRS
Sbjct: 242 SCCAYDTPYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVLKEHDSETLRFFLMSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS + A A+ +Y L+ V S HG F A M
Sbjct: 302 LSYSQDNITQAKAALERLYTALRGVTVDESTELNHGGYLT--------------RFEAAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DDLN + F D + +N +Q +E K+ +K + ILG+
Sbjct: 348 NDDLNVPEAFSVLF-DVARELN-------------RQKDNVEEAGKLAAVLKGLGAILGM 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|390960204|ref|YP_006424038.1| cysteinyl-tRNA synthetase [Thermococcus sp. CL1]
gi|390518512|gb|AFL94244.1| cysteinyl-tRNA synthetase [Thermococcus sp. CL1]
Length = 451
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 181/387 (46%), Positives = 237/387 (61%), Gaps = 3/387 (0%)
Query: 42 MYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGEN 101
MYVCG T YD +HLGHAR V+FD++ RYLEH V V NFTD+DDKII+RAN+ GE+
Sbjct: 1 MYVCGPTVYDYTHLGHARTYVAFDVIRRYLEHRGYTVLMVMNFTDIDDKIIKRANETGED 60
Query: 102 PLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFA 161
P L+ R+ + +L DM L+ P PRV++HME I + + ++ AY V+F
Sbjct: 61 PKELAERFLRYFLEDMRALKVKPADIYPRVTEHMEDIIEFVRKLQEKGYAYEGSDGVYFE 120
Query: 162 VEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGW 221
V K +YG+LS +LE+ G RV KRNP DFALWK AK GEP W SPWG GRPGW
Sbjct: 121 VRKFKDYGKLSKIKLEDLVKGARVEPGEGKRNPEDFALWKKAKPGEPKWSSPWGEGRPGW 180
Query: 222 HIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNE 281
HIECS MS YL FDIHGGG DLIFPHHENEIAQS A V YW+H G + N E
Sbjct: 181 HIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIAQSEACTGHEWVRYWLHTGFLMVNGE 240
Query: 282 KMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQD 341
KMSKSLGNF TIR++ ERY P +R F++ HYRSPL+Y+ ++ A + + +Y TL++
Sbjct: 241 KMSKSLGNFVTIREMLERYDPEVIRLFILQRHYRSPLDYTEEGMEHAKNNLERLYNTLEN 300
Query: 342 CEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSS 401
VA+ + + ++ A + I +F+ M DD NT+ L F+ A +N
Sbjct: 301 IRVAMERAEISFRWEKLEFEAYEAIRDAGRKFYEAMDDDFNTAEALKAVFE-ASNAVNRY 359
Query: 402 LNMLKKKQPKQQQLSLIESLRKIENEV 428
L + + PK+ L +I +EV
Sbjct: 360 LTEV--ETPKESVLRKAWEFFRIVSEV 384
>gi|294637579|ref|ZP_06715861.1| cysteine--tRNA ligase, partial [Edwardsiella tarda ATCC 23685]
gi|291089250|gb|EFE21811.1| cysteine--tRNA ligase [Edwardsiella tarda ATCC 23685]
Length = 363
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 188/366 (51%), Positives = 229/366 (62%), Gaps = 16/366 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCGVT YDL H+GH R V FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVCFDVVARYLRYLGYTL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E+ L+ R E D L P +PR + H+ +I
Sbjct: 62 KYVRNVTDVDDKIIKRALENKESCEQLTERMLAEMHRDFDALNIARPDVEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV GDV FAV+ P+YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IALVEQLIARGHAYVASNGDVMFAVDTDPDYGLLSRQDLEQLQAGARVEVAEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGAYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ G A PAA++ F A M
Sbjct: 302 LNYSEENLKQARAALERLYTALR------------GTDATAQPAADEA---FEGRFRAAM 346
Query: 378 SDDLNT 383
DD NT
Sbjct: 347 DDDFNT 352
>gi|54297226|ref|YP_123595.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Paris]
gi|61216143|sp|Q5X5P9.1|SYC_LEGPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|53751011|emb|CAH12422.1| cysteine tRNA synthetase [Legionella pneumophila str. Paris]
Length = 456
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 180/379 (47%), Positives = 244/379 (64%), Gaps = 19/379 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YNS+T++KE F + GK+GMYVCG+T YD HLGHAR+ V+FD++ RYL +V
Sbjct: 2 LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA++ G + L+ +Y D L LPP ++PR + H+E I
Sbjct: 62 TYVRNITDIDDKIIARASERGVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I +++ AYV + GDV + V+ P YG+LS + +E +G RV + KR+P DF
Sbjct: 122 IRLIQRLLEKGNAYVSDNGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEPSW SPWG GRPGWHIECSAM+ H L +FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +YW+H G + N EKM+KS+GNF+TI + + +HP +R+FL+S+HYRSP
Sbjct: 242 SEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
LNYS L +A A+ +YQ ++D + A S E+ +++F+
Sbjct: 302 LNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEY----------------WQEQFNQ 345
Query: 376 RMSDDLNTSHILTGAFQDA 394
M+DD NT L+ FQ A
Sbjct: 346 AMNDDFNTPVALSVLFQLA 364
>gi|421728113|ref|ZP_16167269.1| cysteinyl-tRNA ligase [Klebsiella oxytoca M5al]
gi|410371073|gb|EKP25798.1| cysteinyl-tRNA ligase [Klebsiella oxytoca M5al]
Length = 461
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 227/350 (64%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YDL H+GHAR V+FD++ RYL L ++
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHARTFVAFDVVSRYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV N TD+DDKII+RAN+ GE+ ++L +R E D L P +PR + H+ +I
Sbjct: 62 KYVSNITDIDDKIIKRANENGESFVALVDRMIVEMHKDFDALNIQRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG+LS Q L+ +AG RV V K NP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKHNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGKYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKFYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + P AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKTAEPSGGEAFEARFIEAMDDDFN 351
>gi|225077094|ref|ZP_03720293.1| hypothetical protein NEIFLAOT_02147 [Neisseria flavescens
NRL30031/H210]
gi|224951651|gb|EEG32860.1| hypothetical protein NEIFLAOT_02147 [Neisseria flavescens
NRL30031/H210]
Length = 473
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 185/389 (47%), Positives = 237/389 (60%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F+PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKESFSPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPATAFELSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|254168458|ref|ZP_04875302.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
gi|197622513|gb|EDY35084.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
Length = 455
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 182/421 (43%), Positives = 268/421 (63%), Gaps = 14/421 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIY++++ +K+ F P+ G+VG+YVCG T YD +H+GHAR A+ FD+ R+LE++ +V
Sbjct: 1 MKIYDTLSGEKKEFVPVHEGRVGIYVCGPTTYDYAHIGHARPAILFDVFRRFLEYMGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ N TDVDDKII +AN+LG++P+ +++ Y +EYL DM L+ P+ + H+E+I
Sbjct: 61 ILISNITDVDDKIINKANELGKDPIEMAHYYAREYLKDMDALRVRRANIIPKATRHIEEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++I +++ AY GDV+F+V+K +YG+LS +++E+ AG RV V+ +KR+P DFA
Sbjct: 121 INLIKTLVDKGYAYESGGDVYFSVKKFKDYGKLSHRKIEDMVAGARVEVNEKKRDPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA+K GEPSW SPWG GRPGWHIECSAMS +YL DIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKASKPGEPSWQSPWGSGRPGWHIECSAMSMNYLGPTLDIHGGGADLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA YWMH G V EKMSKS+GN F I+ ++Y LR +++HYR P
Sbjct: 241 EAATGKPFSKYWMHVGLVRFEKEKMSKSIGNVFLIKDFLKKYPAEVLRLMYLNSHYRKPY 300
Query: 319 NYSVLQLDSA---SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
++S ++ A + ++ YQ L++ + P +E K RI + + I L D+F+
Sbjct: 301 DFSEKNIEEALPLLEKIWSTYQILKNSAMQEGPSEEVEK--RIEDSRKKIIASLEDDFNT 358
Query: 376 R--MSDDL---NTSHILTG----AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 426
R M + L N + L G A + LK ++ ++L + + ++ LIE L + N
Sbjct: 359 REAMKEYLSFINFARELKGGDALAALNFLKEMDEIFDILPRGDNEGKERELIELLLNVRN 418
Query: 427 E 427
E
Sbjct: 419 E 419
>gi|421564183|ref|ZP_16009991.1| cysteine--tRNA ligase [Neisseria meningitidis NM2795]
gi|402338983|gb|EJU74206.1| cysteine--tRNA ligase [Neisseria meningitidis NM2795]
Length = 473
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 237/389 (60%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDTHLDDAKGALTRLYTTLKNTPAAEFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 ---NGYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|300721928|ref|YP_003711208.1| cysteine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
gi|297628425|emb|CBJ88990.1| cysteine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
Length = 460
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 252/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD + RYL +L ++
Sbjct: 2 LKIFNTLSRQKEEFKPIHEGKVGMYVCGITIYDLCHIGHGRTFVAFDAIARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E+ L+ R E D L L P +PR + H+++I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNESCDDLTTRMLAEMHNDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV GDV F+++ +P+YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEITETLIERGHAYVAANGDVMFSIDTNPDYGLLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKQGEPSWESPWGTGRPGWHIECSAMNGKTLGHHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLGYYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A ++ +Y +L+ + + P G AR A M
Sbjct: 302 LNYTEENLKQARTSLERLYTSLRGTDKSAQPAGGAGFEARFTEA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + I + + E++++ ILGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REINRLKAED--------IVAANGLAAELRKLAGILGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|445496217|ref|ZP_21463261.1| cysteine-tRNA ligase CysS [Janthinobacterium sp. HH01]
gi|444792378|gb|ELX13925.1| cysteine-tRNA ligase CysS [Janthinobacterium sp. HH01]
Length = 463
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 184/356 (51%), Positives = 233/356 (65%), Gaps = 9/356 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ + K+ F PI GKV MYVCG+T YD H+GHAR ++FD++YR+L EV
Sbjct: 4 LKIYNTLARDKQTFVPIEAGKVRMYVCGMTIYDYCHIGHARMMMAFDVMYRWLLASGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY RN TD+DDKII+RA + GE L+ R+ Q D L LP T PR ++++ Q+
Sbjct: 64 TYARNITDIDDKIIKRAVENGETISQLTTRFTQYMDEDTGALGILPATLVPRATEYVPQM 123
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I + + D AY +GDV +AV PNYGRLSG+ L++ RAGERV V++ KR+P DF
Sbjct: 124 LALIETLESKDLAYQGSDGDVNYAVRNFPNYGRLSGKSLDDLRAGERVDVNTGKRDPLDF 183
Query: 198 ALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWKA+K EP WDS WG GRPGWHIECSAM + L FDIHGGG DL FPHHENE
Sbjct: 184 VLWKASKESEPDEVKWDSKWGKGRPGWHIECSAMCSALLGEHFDIHGGGADLQFPHHENE 243
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A + V+YW+HNG V +NEKMSKSLGNFFTIR + ++Y +R F++ AHY
Sbjct: 244 IAQSEGAFGRTMVNYWVHNGFVRVDNEKMSKSLGNFFTIRDVLKKYDAEVVRFFILRAHY 303
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCE---VALSPFQEHGKTARINPAAEDCIN 367
RSPLNYS LD A A+ +Y L E +AL + H AR A +D N
Sbjct: 304 RSPLNYSDAHLDDARVALTRLYTALDGVEGDGLALDWQEPH--AARFAEAMDDDFN 357
>gi|261379506|ref|ZP_05984079.1| cysteine--tRNA ligase [Neisseria subflava NJ9703]
gi|284797969|gb|EFC53316.1| cysteine--tRNA ligase [Neisseria subflava NJ9703]
Length = 473
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 237/389 (60%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE FTPI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAK GEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKVGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|296101636|ref|YP_003611782.1| cysteinyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295056095|gb|ADF60833.1| cysteinyl tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 461
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 225/350 (64%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L +
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIVEMHKDFDALNILRPDSEPRATHHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+ ++I AYV + GDV F+V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IDITEKLIARGHAYVADNGDVMFSVPTDPTYGSLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++ AR D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSVEAAGGEAFEARFVEVMNDDFN 351
>gi|334129555|ref|ZP_08503359.1| Cysteinyl-tRNA synthetase [Methyloversatilis universalis FAM5]
gi|333445240|gb|EGK73182.1| Cysteinyl-tRNA synthetase [Methyloversatilis universalis FAM5]
Length = 459
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 185/380 (48%), Positives = 240/380 (63%), Gaps = 22/380 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++K+ F PI G+V MYVCG+T YD HLGHAR V FD++ R+L V
Sbjct: 2 LKIYNTLAREKQDFVPIEPGRVRMYVCGMTVYDFCHLGHARVMVVFDMVTRWLRASDYTV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + GE +L++R+ D L L P ++PR ++ + Q+
Sbjct: 62 TYVRNITDIDDKIIRRAAENGETMRALTDRFIAAMHEDADALGVLRPDHEPRATEFVPQM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ +I ++ AY GDV ++V K YG+LSG+ L++ RAGERV V K++P DF
Sbjct: 122 QTLIQRLEAKGLAYRAASGDVNYSVRKFDGYGKLSGKSLDDLRAGERVDVIDDKQDPLDF 181
Query: 198 ALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWK AK EP+ W SPWG GRPGWHIECSAMS+ L +FDIHGGG DL FPHHENE
Sbjct: 182 VLWKHAKPAEPAEAKWASPWGDGRPGWHIECSAMSSQLLGDRFDIHGGGADLQFPHHENE 241
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A + V+YWMHNG V ++EKMSKSLGNFFTIR++ ++Y P +R F++ AHY
Sbjct: 242 IAQSEGAHGHTFVNYWMHNGFVRVDDEKMSKSLGNFFTIREVLQKYDPEVVRFFILRAHY 301
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDE 372
RSPLNYS LD A A+ +Y TL++ + PAA D
Sbjct: 302 RSPLNYSDAHLDDARGALTRLYTTLKN----------------VPPAACQPDWNTPAGSR 345
Query: 373 FHARMSDDLNTSHILTGAFQ 392
F A M DD NT+ L F+
Sbjct: 346 FRAAMDDDFNTAEALAVLFE 365
>gi|401674819|ref|ZP_10806816.1| cysteinyl-tRNA synthetase [Enterobacter sp. SST3]
gi|400217834|gb|EJO48723.1| cysteinyl-tRNA synthetase [Enterobacter sp. SST3]
Length = 461
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 199/421 (47%), Positives = 252/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F+V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEKLIARGHAYVADNGDVMFSVPTDPTYGALSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGDGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ T R PAA + R F M
Sbjct: 302 LNYSEENLKQARSALERLYTALR-------------GTDRSVPAAGGEAFEAR--FVEVM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +L LRK+ +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKSEDMAAAN-ALASHLRKLSA-------VLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|158319520|ref|YP_001512027.1| cysteinyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
gi|187629787|sp|A8MLB7.1|SYC_ALKOO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|158139719|gb|ABW18031.1| cysteinyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
Length = 464
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 183/423 (43%), Positives = 264/423 (62%), Gaps = 18/423 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T++KE F P+ GKV MY CG T Y+ H+G+AR + FD L RYL + +V
Sbjct: 1 MKLYNTLTRKKEEFIPLEEGKVRMYACGPTVYNYFHIGNARTFMVFDALRRYLIYRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTDVDDKIIRRAN+ G P +S R+ +EY D L P+V+++M +I
Sbjct: 61 TFVQNFTDVDDKIIRRANEEGVAPEEISERFIKEYFYDAGTLGIEKADIHPKVTENMAEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +++ AY GDV+F V K YG+LS Q LE+ +AG R+ ++ K+NP DFA
Sbjct: 121 IAFVAKLVEKGHAYESNGDVYFDVSKYEEYGKLSKQSLEDLQAGARIEINEYKKNPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AKAGEPSW+SPWG GRPGWHIECSAM+ YL DIHGGG DL+FPHHENEIAQS
Sbjct: 181 LWKSAKAGEPSWESPWGNGRPGWHIECSAMAKRYLGETIDIHGGGGDLVFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A +YW+H G++ +N+KMSKSL NFFT R+I+E + LR F++SAHYR+P+
Sbjct: 241 EACSGKKFANYWLHVGYLNVDNKKMSKSLNNFFTPREISEEFDLENLRFFMLSAHYRNPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHA 375
N+S L++A + + +Y + E L E+ ++ ++ I+ L +++F
Sbjct: 301 NFSRDLLEAAKNGLDRLYTGKNNLEYLL----ENAAEREVSEEEKNFIHGLQSFKNQFID 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+ DD NT+ + F D ++ INS ++ K+ + L+ E+ +L
Sbjct: 357 AVDDDFNTADGIAVIF-DLVREINSHISEKNSKKAVEASYDLL----------MELTGVL 405
Query: 436 GLL 438
GLL
Sbjct: 406 GLL 408
>gi|350424873|ref|XP_003493941.1| PREDICTED: cysteinyl-tRNA synthetase-like [Bombus impatiens]
Length = 463
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 205/444 (46%), Positives = 257/444 (57%), Gaps = 35/444 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE F PI KVGMYVCGVT YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEAFNPIHPNKVGMYVCGVTIYDLCHIGHGRTFVAFDVVSRYLRFLGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + GE+ L+ R E D L P +PR + HM I
Sbjct: 62 TYVRNITDVDDKIIKRARENGESCQQLTERMLTEMYRDFDALNIQRPDQEPRATAHMADI 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +I AYV GDV F+VE +YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELVNTLIKRGHAYVATNGDVMFSVESDNHYGLLSRQNLEQLQAGARVEVTEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM+ + L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNNNVLGHHFDIHGGGADLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V ++EKMSKSLGNFFTIR + + Y ++R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDHEKMSKSLGNFFTIRDVLKHYDAESVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ Y L+D +Q+ N F M
Sbjct: 302 LNYSEENLKQARIALERWYTALRDTHNVEMDYQD---------------NPYYHRFCMAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSL---NMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
+DD NT + F D IN + N+LK Q LR + N V
Sbjct: 347 NDDFNTPEAYSVLF-DLASEINKAKAEDNLLKANQSATL-------LRYLANNV------ 392
Query: 435 LGLLP--PGAYSEVKTAFLVLLHV 456
LGLL P A+ + K + + H+
Sbjct: 393 LGLLTQDPQAFLQGKNDEVDVAHI 416
>gi|254492720|ref|ZP_05105891.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
gi|268595732|ref|ZP_06129899.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
gi|268597919|ref|ZP_06132086.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
gi|268600306|ref|ZP_06134473.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
gi|268602538|ref|ZP_06136705.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
gi|268681087|ref|ZP_06147949.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
gi|268685567|ref|ZP_06152429.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
gi|291044895|ref|ZP_06570604.1| cysteinyl-tRNA synthetase CysS [Neisseria gonorrhoeae DGI2]
gi|293397970|ref|ZP_06642176.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae F62]
gi|226511760|gb|EEH61105.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
gi|268549121|gb|EEZ44539.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
gi|268551707|gb|EEZ46726.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
gi|268584437|gb|EEZ49113.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
gi|268586669|gb|EEZ51345.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
gi|268621371|gb|EEZ53771.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
gi|268625851|gb|EEZ58251.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
gi|291011789|gb|EFE03785.1| cysteinyl-tRNA synthetase CysS [Neisseria gonorrhoeae DGI2]
gi|291611916|gb|EFF40985.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae F62]
Length = 476
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 188/395 (47%), Positives = 241/395 (61%), Gaps = 31/395 (7%)
Query: 15 MDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHL 74
M++T IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L
Sbjct: 2 MNMT-AIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREC 60
Query: 75 KCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDH 134
+TYVRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ +++
Sbjct: 61 GYPLTYVRNITDIDDKIIARAAENGETIGELNARFIQAMHEDADALGVLRPDIEPKATEN 120
Query: 135 MEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRN 193
+ Q+ MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+
Sbjct: 121 IPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRD 180
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHEN
Sbjct: 181 PLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHEN 240
Query: 254 EIAQSCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 297
EIAQS A S+V YW+HNG + + EKMSKSLGNFFTIR++
Sbjct: 241 EIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVL 300
Query: 298 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 357
++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 301 KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---- 356
Query: 358 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 357 ---------NGYTRRFYAAMNDDFGTVEAVAVLFE 382
>gi|350570254|ref|ZP_08938622.1| cysteine--tRNA ligase [Neisseria wadsworthii 9715]
gi|349797303|gb|EGZ51070.1| cysteine--tRNA ligase [Neisseria wadsworthii 9715]
Length = 469
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 185/387 (47%), Positives = 237/387 (61%), Gaps = 26/387 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T+QKE F P+ V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 2 LTVYNTLTRQKEQFVPLNPQNVRMYVCGMTVYDYCHLGHARVMVVFDIIARWLRQCGYPL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + GE L+ R+ Q D A L + P +P+ ++H+ Q+
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTARFIQAMNEDAAALGVIRPDVEPKATEHVRQM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I+N AY E GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF
Sbjct: 122 LAMIQRLIDNGKAYPAENGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EP+W+SPWG GRPGWHIECSAMS FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPSEPAWESPWGQGRPGWHIECSAMSEELFGDTFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAA----CQ--------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 305
SC A C +S+V YW+HNG + + EKMSKSLGNFFTIR + + Y +
Sbjct: 242 SCGAHGGSCGHNHGGKTIESHVKYWLHNGFIRVDGEKMSKSLGNFFTIRDVLKAYDAEVV 301
Query: 306 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 365
R F++ AHYRSPLNYS LD A A+ +Y L++ A E+
Sbjct: 302 RFFILRAHYRSPLNYSDAHLDDAKGALTRLYTALKNTPPAECAVSEN------------- 348
Query: 366 INKLRDEFHARMSDDLNTSHILTGAFQ 392
N F A M+DD T + F+
Sbjct: 349 TNDYTRRFFAAMNDDFGTVEAVVVLFE 375
>gi|268600169|ref|ZP_06134336.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
gi|268685235|ref|ZP_06152097.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
gi|268584300|gb|EEZ48976.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
gi|268625519|gb|EEZ57919.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
Length = 476
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 188/395 (47%), Positives = 241/395 (61%), Gaps = 31/395 (7%)
Query: 15 MDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHL 74
M++T IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L
Sbjct: 2 MNMT-AIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREC 60
Query: 75 KCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDH 134
+TYVRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ +++
Sbjct: 61 GYPLTYVRNITDIDDKIIARAAENGETIGELNARFIQAMHEDADALGVLRPDIEPKATEN 120
Query: 135 MEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRN 193
+ Q+ MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+
Sbjct: 121 IPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRD 180
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHEN
Sbjct: 181 PLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHEN 240
Query: 254 EIAQSCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 297
EIAQS A S+V YW+HNG + + EKMSKSLGNFFTIR++
Sbjct: 241 EIAQSVGASGHTCGHDHAQTHHGRSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVL 300
Query: 298 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 357
++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 301 KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---- 356
Query: 358 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 357 ---------NGYTRRFYAAMNDDFGTVEAVAVLFE 382
>gi|221134802|ref|ZP_03561105.1| cysteinyl-tRNA synthetase [Glaciecola sp. HTCC2999]
Length = 459
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 190/396 (47%), Positives = 239/396 (60%), Gaps = 22/396 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L I+N++T++K F P+ KVGMYVCG+T YDLSH+GHAR +SFD++ RYL H+ EV
Sbjct: 2 LHIFNTLTREKAPFVPLEPNKVGMYVCGITVYDLSHMGHARTYLSFDVMVRYLRHMGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L+ R D A L LPP +PRV+ HM +I
Sbjct: 62 KYVRNITDVDDKIIQRAIENNETMSQLTERTVAMMHEDFAALNLLPPDIEPRVTTHMAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++I +++ AYV GDV F V +YG LS Q L+ ++G RVAV K +P DF
Sbjct: 122 IEVIEKLVAKGHAYVASSGDVLFDVSTFKDYGALSKQDLDQLQSGARVAVADGKDDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKA EPSW SPWG GRPGWHIECSAM+ +L FDIHGGG DL FPHHENE+AQ
Sbjct: 182 VLWKKAKANEPSWSSPWGEGRPGWHIECSAMNHKHLGKHFDIHGGGSDLTFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V +NEKMSKSLGNFFT+R + E++H LR FL+SAHYRS
Sbjct: 242 SCCAFDTPYVNTWVHTGMVQVDNEKMSKSLGNFFTLRSVLEQHHKETLRFFLMSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEV-ALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
L+YS L+ A + +Y L+D + + G AR F A
Sbjct: 302 LSYSQDNLEQAQSGLERLYTALRDVTPDSRTELGYGGYLAR---------------FEAA 346
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 412
M+DD NT + F A LN K P +
Sbjct: 347 MNDDFNTPIAFSVLFDCA-----KDLNKAKSTDPAE 377
>gi|110799706|ref|YP_697116.1| cysteinyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
gi|168211251|ref|ZP_02636876.1| cysteinyl-tRNA synthetase [Clostridium perfringens B str. ATCC
3626]
gi|122958668|sp|Q0TMM4.1|SYC_CLOP1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|110674353|gb|ABG83340.1| cysteinyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
gi|170710753|gb|EDT22935.1| cysteinyl-tRNA synthetase [Clostridium perfringens B str. ATCC
3626]
Length = 466
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 174/408 (42%), Positives = 253/408 (62%), Gaps = 12/408 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++ ++KE F P+ G+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 2 IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGFKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I++AN+ G + + Y +EY D L T PR ++ + +I
Sbjct: 62 DFVQNFTDIDDKMIKKANEEGTTVKKIGDTYIKEYYQDADALNIERATVNPRATEFIGEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +++ AY V+GDV+F+ +K YG+LSGQ +E+ ++G R++VD RK++P DFA
Sbjct: 122 IKFVKGLVDKGYAYEVDGDVYFSTKKFEGYGKLSGQNIEDLQSGARISVDERKKDPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS
Sbjct: 182 IWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YW+H+ V NNEKMSKSL NFFT R+I ERY +R ++SAHYR L
Sbjct: 242 EALTGEPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVIRFLMLSAHYRQQL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDC-----EVALSPFQEHGKTARINPAAEDCINKLRDEF 373
N+S L+SA +V IY + + EV+ E K A + +NK ++++
Sbjct: 302 NFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEK------AYLESLNKYKEKY 355
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
+M DD NT+ +T F D +K N+++ + K+ Q+ L LI L
Sbjct: 356 IEKMDDDFNTADAITAIF-DLIKDTNTNITIDSSKELAQKALELIREL 402
>gi|52841538|ref|YP_095337.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378777173|ref|YP_005185610.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|61216153|sp|Q5ZVY1.1|SYC_LEGPH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|52628649|gb|AAU27390.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364507987|gb|AEW51511.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 456
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 182/381 (47%), Positives = 244/381 (64%), Gaps = 23/381 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YNS+T++KE F + G +GMYVCG+T YD HLGHAR+ V+FD++ RYL +V
Sbjct: 2 LHLYNSLTRKKEPFVSLKPGTIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA++ G + L+ +Y D L LPP ++PR + H+E I
Sbjct: 62 TYVRNITDIDDKIIARASERGVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I +++ AYV E GDV + V+ P YG+LS + +E +G RV + KR+P DF
Sbjct: 122 IRLIQRLLEKGNAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEPSW SPWG GRPGWHIECSAM+ H L +FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +YW+H G + N EKM+KS+GNF+TI + + +HP +R+FL+S+HYRSP
Sbjct: 242 SEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD----EF 373
LNYS L +A A+ +YQ ++D + P ED +KL + +F
Sbjct: 302 LNYSEENLLNAKKALIRLYQAVKD----------------VPPQTED--SKLDEYWQVQF 343
Query: 374 HARMSDDLNTSHILTGAFQDA 394
+ M+DD NT L+ FQ A
Sbjct: 344 NQAMNDDFNTPVALSVLFQLA 364
>gi|358450731|ref|ZP_09161184.1| cysteinyl-tRNA synthetase [Marinobacter manganoxydans MnI7-9]
gi|357225107|gb|EHJ03619.1| cysteinyl-tRNA synthetase [Marinobacter manganoxydans MnI7-9]
Length = 462
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 186/367 (50%), Positives = 240/367 (65%), Gaps = 15/367 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++TQQKE F PI GKV MYVCG+T YD HLGHAR V+FD++ RYL H +V
Sbjct: 2 IRIYNTLTQQKEEFRPIEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVITRYLRHRGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKI+RRA++ GE L++R + D A L L P +PR + ++++I
Sbjct: 62 NYVRNITDIDDKILRRADENGEPYDELTDRMIKAMHEDEARLGVLSPDEEPRATAYIDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I AY + GDV+F+V+ +YG+LS ++LE+ AG RV V KR+PADF
Sbjct: 122 IAMIHKLIAGGHAYAADNGDVYFSVDSFDDYGKLSKKKLEDLLAGARVDVQEAKRSPADF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAKAGE SW SPWG GRPGWHIECSAMS L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 ALWKAAKAGEVSWPSPWGDGRPGWHIECSAMSTCCLGDTFDIHGGGPDLLFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMH G + N EKMSKSLGNFFTIR+I E+Y +R+FL+S+HYRS
Sbjct: 242 SECATGHTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREIMEKYPAEVVRYFLVSSHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++YS L A + +Y L+ + P K A + + D + F M
Sbjct: 302 VDYSEENLAEAGRTLTRLYHALR----GIVP----AKAADVPESEHD------ERFAEAM 347
Query: 378 SDDLNTS 384
DD NT+
Sbjct: 348 DDDFNTA 354
>gi|18311409|ref|NP_563343.1| cysteinyl-tRNA synthetase [Clostridium perfringens str. 13]
gi|168214716|ref|ZP_02640341.1| cysteinyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
gi|168217920|ref|ZP_02643545.1| cysteinyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
gi|182626995|ref|ZP_02954725.1| cysteinyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
gi|21264002|sp|Q8XHQ5.1|SYC_CLOPE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|18146093|dbj|BAB82133.1| cysteine-tRNA ligase [Clostridium perfringens str. 13]
gi|170713805|gb|EDT25987.1| cysteinyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
gi|177907665|gb|EDT70289.1| cysteinyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
gi|182380037|gb|EDT77516.1| cysteinyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
Length = 466
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 174/408 (42%), Positives = 253/408 (62%), Gaps = 12/408 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++ ++KE F P+ G+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 2 IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGFKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I++AN+ G + + Y +EY D L T PR ++ + +I
Sbjct: 62 DFVQNFTDIDDKMIKKANEEGTTVKKIGDTYIKEYYQDADALNIERATVNPRATEFIGEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +++ AY V+GDV+F+ +K YG+LSGQ +E+ ++G R++VD RK++P DFA
Sbjct: 122 IKFVKGLVDKGYAYEVDGDVYFSTKKFEGYGKLSGQNIEDLQSGARISVDERKKDPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS
Sbjct: 182 IWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YW+H+ V NNEKMSKSL NFFT R+I ERY +R ++SAHYR L
Sbjct: 242 EALTGEPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVIRFLMLSAHYRQQL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDC-----EVALSPFQEHGKTARINPAAEDCINKLRDEF 373
N+S L+SA +V IY + + EV+ E K A + +NK ++++
Sbjct: 302 NFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEK------AYLESLNKYKEKY 355
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
+M DD NT+ +T F D +K N+++ + K+ Q+ L LI L
Sbjct: 356 IEKMDDDFNTADAITAIF-DLIKDTNTNITIDSSKELAQKALELIREL 402
>gi|194099737|ref|YP_002002872.1| protein CysS [Neisseria gonorrhoeae NCCP11945]
gi|385336681|ref|YP_005890628.1| hypothetical protein NGTW08_1810 [Neisseria gonorrhoeae
TCDC-NG08107]
gi|193935027|gb|ACF30851.1| CysS [Neisseria gonorrhoeae NCCP11945]
gi|317165224|gb|ADV08765.1| hypothetical protein NGTW08_1810 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 475
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 188/395 (47%), Positives = 241/395 (61%), Gaps = 31/395 (7%)
Query: 15 MDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHL 74
M++T IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L
Sbjct: 1 MNMT-AIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREC 59
Query: 75 KCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDH 134
+TYVRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ +++
Sbjct: 60 GYPLTYVRNITDIDDKIIARAAENGETIGELNARFIQAMHEDADALGVLRPDIEPKATEN 119
Query: 135 MEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRN 193
+ Q+ MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+
Sbjct: 120 IPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRD 179
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHEN
Sbjct: 180 PLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHEN 239
Query: 254 EIAQSCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 297
EIAQS A S+V YW+HNG + + EKMSKSLGNFFTIR++
Sbjct: 240 EIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVL 299
Query: 298 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 357
++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 300 KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---- 355
Query: 358 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 356 ---------NGYTRRFYAAMNDDFGTVEAVAVLFE 381
>gi|225851008|ref|YP_002731242.1| cysteinyl-tRNA synthetase [Persephonella marina EX-H1]
gi|254781689|sp|C0QRE6.1|SYC_PERMH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|225645417|gb|ACO03603.1| cysteinyl-tRNA synthetase [Persephonella marina EX-H1]
Length = 487
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 177/400 (44%), Positives = 247/400 (61%), Gaps = 9/400 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++LK+YN++T +KE F PI G+V +Y CGVT YD++H+GH R+ + FD++ RYL +L
Sbjct: 1 MSLKVYNTLTGKKEEFVPIKPGEVKIYTCGVTVYDVNHVGHGRSLIVFDVIRRYLRYLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V +VRNFTDVDDKII RA + +++RY +EY D + + P +PRV+ H+
Sbjct: 61 NVYFVRNFTDVDDKIINRAKNECLPFTVIADRYIKEYFQDAENFRIEPADVEPRVTTHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I D I ++I+ AY VEGDV+F+V K YG+LS + ++ AG RV +KR+P D
Sbjct: 121 DIIDFIQRLIDKGYAYEVEGDVYFSVRKFKEYGKLSKRSVDELIAGARVEPGEKKRDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA+KAGEP+WDSPWG GRPGWH EC AM +L DIHGGG+DL FPHHENE+A
Sbjct: 181 FALWKASKAGEPAWDSPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTFPHHENELA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ A YW+HNG VT N +KMSKSLGN+ T+++I +Y P LR ++S HYRS
Sbjct: 241 QAEALSDKPFARYWIHNGLVTVNGQKMSKSLGNYITLKEIYSKYDPDVLRLLVLSVHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL++S +++ A Y+ L+ ++ + + D I K F+A
Sbjct: 301 PLDFSWEKMEETKKA----YERLKGAIDEYEILKKLPENPDFDEHLYDEIAKAEQGFYAA 356
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 416
MSDD NT L F + +N+L+ K K +S
Sbjct: 357 MSDDFNTPEALASLFT-----LVREMNILRDKAVKSGGIS 391
>gi|148358849|ref|YP_001250056.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Corby]
gi|187629845|sp|A5IBG0.1|SYC_LEGPC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148280622|gb|ABQ54710.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Corby]
Length = 456
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 180/379 (47%), Positives = 243/379 (64%), Gaps = 19/379 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YNS+T++KE F + GK+GMYVCG+T YD HLGHAR+ V+FD++ RYL +V
Sbjct: 2 LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA++ + L+ +Y D L LPP ++PR + H+E I
Sbjct: 62 TYVRNITDIDDKIIARASERDVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I +++ AYV E GDV + V+ P YG+LS + +E +G RV + KR+P DF
Sbjct: 122 IRLIQRLLEKGSAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEPSW SPWG GRPGWHIECSAM+ H L +FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +YW+H G + N EKM+KS+GNF+TI + + +HP +R+FL+S+HYRSP
Sbjct: 242 SEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
LNYS L +A A+ +YQ ++D + A S E+ +++F+
Sbjct: 302 LNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEY----------------WQEQFNQ 345
Query: 376 RMSDDLNTSHILTGAFQDA 394
M+DD NT L+ FQ A
Sbjct: 346 AMNDDFNTPVALSVLFQLA 364
>gi|427828191|ref|ZP_18995209.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|316983974|gb|EFV62953.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
Length = 587
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 184/389 (47%), Positives = 239/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F+PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 118 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 177
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 178 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 237
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 238 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 297
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 298 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 357
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 358 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 417
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 418 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 464
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+ + F+ M+DD +T + F+
Sbjct: 465 EAGDDYTRRFYVAMNDDFDTVKAVAVLFE 493
>gi|406597253|ref|YP_006748383.1| cysteinyl-tRNA ligase [Alteromonas macleodii ATCC 27126]
gi|406374574|gb|AFS37829.1| cysteinyl-tRNA ligase [Alteromonas macleodii ATCC 27126]
Length = 460
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 190/421 (45%), Positives = 252/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN+ T++K F P+ GKVG+YVCG+T YDLSH+GHAR +SFD+L RY+ HL +V
Sbjct: 2 LHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYMRHLGLDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII RAN+ GE+ +L+ R D A + L P +P VS HM++I
Sbjct: 62 KYVRNITDIDDKIIARANENGESFEALTARTIAMMHEDFAAINLLEPDVEPTVSGHMDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++++ AY + GDV F V K +YG+LS Q L+ +AG RV V + K +P DF
Sbjct: 122 IAIIQRLMDKGYAYQAKSGDVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAAGKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK K GEP+W SPWG GRPGWHIECSAM+ +L + FDIHGGG DL FPHHENE+AQ
Sbjct: 182 VLWKTTKPGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH G V N+EKMSKSLGNFFT+R + + + LR FL+SAHYRS
Sbjct: 242 SCCAYDTPYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVLKEHDSETLRFFLMSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS + A A+ +Y L+ EV S +G + F A M
Sbjct: 302 LSYSQDNITQAKAALERLYTALRGVEVDESTDLSYGGYLK--------------RFEAAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DDLN + F + LN K + +L+ + +K + ILG+
Sbjct: 348 NDDLNVPEAFSVLFD-----VARELNRQKDNADEAGKLAAV---------LKGLGAILGM 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|300691854|ref|YP_003752849.1| cysteine tRNA synthetase (cysteine--tRNA ligase) [Ralstonia
solanacearum PSI07]
gi|299078914|emb|CBJ51575.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Ralstonia
solanacearum PSI07]
Length = 465
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 185/383 (48%), Positives = 244/383 (63%), Gaps = 25/383 (6%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+LKIYN++ ++K+ F PI G+V MYVCG+T YD H+GHAR V FD++ R+L +
Sbjct: 3 SLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASGYD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKII+RA + GE +L+NR+ D L P ++PR ++++ Q
Sbjct: 63 VTYVRNITDIDDKIIKRAVENGETIGALTNRFIAAMHEDADALGVQRPDHEPRATEYVPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI ++ +N AY +GDV +AV K P YGRLSG+ LE+ RAGERVA + K++P D
Sbjct: 123 MLSMIGRLQDNGLAYQAADGDVNYAVRKFPGYGRLSGKSLEDLRAGERVAANDAKQDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK+AKA EP+ W SPWG GRPGWHIECSAMS L + FD+HGGG DL FPHHEN
Sbjct: 183 FVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQ+ A ++ V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y P +R F++ +H
Sbjct: 243 EIAQAEGANGNTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRFFILRSH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQD--CEVALSP--FQEHGKTARINPAAEDCINKL 369
YRS LNYS LD A A+ +Y L+D E P + HGK
Sbjct: 303 YRSDLNYSDAHLDDARHALTRLYTALKDVPAEADARPDWNEPHGK--------------- 347
Query: 370 RDEFHARMSDDLNTSHILTGAFQ 392
F M+DD NT + F+
Sbjct: 348 --RFREAMNDDFNTPVAMAALFE 368
>gi|238022971|ref|ZP_04603397.1| hypothetical protein GCWU000324_02893 [Kingella oralis ATCC 51147]
gi|237865779|gb|EEP66917.1| hypothetical protein GCWU000324_02893 [Kingella oralis ATCC 51147]
Length = 474
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 195/436 (44%), Positives = 246/436 (56%), Gaps = 48/436 (11%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T+QKE F P+ V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 4 LTVYNTLTRQKEPFIPLNPQNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGYPL 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RAN+ GE L+ R+ D L P +P+ ++H+ Q+
Sbjct: 64 TYVRNITDIDDKIIARANENGETIQQLTARFIAAMNEDSDALGVQRPDVEPKATEHIAQM 123
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI Q+I N AY GDV++AV + P YG+LSG+ L++ RAGERV VD KR+P DF
Sbjct: 124 IAMIEQLIANGKAYSAANGDVYYAVREFPAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 183
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EP W SPWG GRPGWHIECSAM FDIHGGG DL FPHHENEIAQ
Sbjct: 184 VLWKAAKPEEPHWQSPWGNGRPGWHIECSAMGGELFGDTFDIHGGGADLQFPHHENEIAQ 243
Query: 258 SCAACQ---------------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHP 302
SC A DS+V YW+HNG + +NEKMSKSLGNFFTIR + ++Y
Sbjct: 244 SCGAHHGISGEHAPRAAHKTIDSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVLKKYDA 303
Query: 303 LALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA 362
+R F++ AHYRSPLNYS LD A ++ +Y L + A EH
Sbjct: 304 EVVRFFILRAHYRSPLNYSDAHLDDAKHSLTSLYNALGNVAPAPFTLSEHA--------- 354
Query: 363 EDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 422
N F+A M DD +T + F+ L K+ K Q L L+
Sbjct: 355 ----NDYTRRFYAAMDDDFDTVKAVAVLFE------------LAKEVNKTQSAELSGCLK 398
Query: 423 KIENEVKEVLRILGLL 438
+ +LGLL
Sbjct: 399 ALAG-------VLGLL 407
>gi|385341075|ref|YP_005894946.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240149]
gi|416175060|ref|ZP_11609368.1| cysteinyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
gi|416189388|ref|ZP_11615301.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M0579]
gi|433489259|ref|ZP_20446405.1| cysteine--tRNA ligase [Neisseria meningitidis M13255]
gi|325129292|gb|EGC52130.1| cysteinyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
gi|325135312|gb|EGC57933.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M0579]
gi|325201281|gb|ADY96735.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240149]
gi|432220189|gb|ELK76014.1| cysteine--tRNA ligase [Neisseria meningitidis M13255]
Length = 473
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 237/389 (60%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 ---NGYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|262039625|ref|ZP_06012919.1| cysteine--tRNA ligase [Leptotrichia goodfellowii F0264]
gi|261746382|gb|EEY33927.1| cysteine--tRNA ligase [Leptotrichia goodfellowii F0264]
Length = 505
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 183/432 (42%), Positives = 265/432 (61%), Gaps = 16/432 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+M+ + E F PI GKV MYVCG T Y+ HLG+AR V FD+L RY ++ +V
Sbjct: 12 MNLYNTMSNKIEEFKPIEEGKVKMYVCGPTVYNYIHLGNARPVVIFDILARYFKYRGYDV 71
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII+RAN+ G +P ++ +Y Q + D L L +P+V+++M +I
Sbjct: 72 TYVQNFTDVDDKIIKRANEEGISPKEVTEKYIQGFFEDTELLNILQDIKRPKVTENMPEI 131
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I ++I N AY ++G+VFF V+K +YG+LS Q+++ G RV + K NP DFA
Sbjct: 132 IETIEKLIENGYAYEIDGNVFFDVKKYEDYGKLSNQKIDELEIGARVDIMEIKNNPLDFA 191
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GEP WDSPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIAQS
Sbjct: 192 LWKKKKEGEPYWDSPWGQGRPGWHIECSAMSKKYLGETFDIHGGGQDLIFPHHENEIAQS 251
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+HNG V N +KMSKS GNFF +R+I ++ +R F++S HYR P+
Sbjct: 252 KCAYHGHFAKYWVHNGFVQVNGDKMSKSTGNFFLLREILGKFSGNVIRLFILSTHYRKPV 311
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE------ 372
N+S +++ + + +++ E +L K+ ++ + INK+ E
Sbjct: 312 NFSFEDMENTKKTLQNVISSIRRFEKSLEKLSSGIKSEDVSDEKINEINKVFKEKIKSFD 371
Query: 373 --FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS---LIESL----RK 423
F M +D+NT L+ F D ++ N + ++K K++ S L E+L +
Sbjct: 372 VKFIGAMDEDMNTPQALSTIF-DQIRETNRFCDDIEKILDKERNDSSFLLFEALELSYKN 430
Query: 424 IENEVKEVLRIL 435
++ ++++VL +L
Sbjct: 431 LKTKIEDVLGVL 442
>gi|255067745|ref|ZP_05319600.1| cysteine--tRNA ligase [Neisseria sicca ATCC 29256]
gi|255047956|gb|EET43420.1| cysteine--tRNA ligase [Neisseria sicca ATCC 29256]
Length = 483
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 186/391 (47%), Positives = 238/391 (60%), Gaps = 30/391 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 12 LNLYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLCECGYPL 71
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 72 TYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQM 131
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF
Sbjct: 132 IAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 191
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQ
Sbjct: 192 VLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQ 251
Query: 258 SCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYH 301
S A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y
Sbjct: 252 SVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYD 311
Query: 302 PLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPA 361
P +R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 312 PEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFELSENA-------- 363
Query: 362 AEDCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 364 -----NDYTRRFYAAMNDDFGTVEAVAVLFE 389
>gi|410666863|ref|YP_006919234.1| cysteinyl-tRNA synthetase [Thermacetogenium phaeum DSM 12270]
gi|409104610|gb|AFV10735.1| cysteinyl-tRNA synthetase CysS [Thermacetogenium phaeum DSM 12270]
Length = 507
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 193/427 (45%), Positives = 256/427 (59%), Gaps = 10/427 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN+++++KE F P V +V MYVCG T Y+ HLG+ARA V FD + RYLE+
Sbjct: 1 MALMVYNTLSRRKEEFVPGV-NQVRMYVCGPTTYNFIHLGNARALVVFDTIRRYLEYKGY 59
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V YV+NFTD+DDKII RA + + L+ +Y EY D L+ T PR S+H+
Sbjct: 60 RVKYVQNFTDIDDKIINRAREENTSARELAEKYIGEYFRDADALRVKRATVHPRASEHIP 119
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ DM+ + AY GDV+F+V P YG+LSG+ LE AG RV VD RKR+P D
Sbjct: 120 EMIDMVRVLCEKGIAYEYGGDVYFSVRSFPGYGKLSGRTLEEMLAGARVEVDERKRDPLD 179
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GEP W+SPWG GRPGWH+ECS MS YL FDIHGGG DLIFPHHENEIA
Sbjct: 180 FVLWKAAKPGEPFWESPWGAGRPGWHLECSVMSLKYLGFGFDIHGGGSDLIFPHHENEIA 239
Query: 257 QSCA-ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
Q+ A A + YW+HNG VT + EKMSKSLGNFF +R + + + P LR FL+S HYR
Sbjct: 240 QAEAYAGSEPFARYWVHNGFVTVDEEKMSKSLGNFFLVRGLLQEWAPEILRFFLLSTHYR 299
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD---E 372
SPL+++ L +A + + TL + Q R+ AE +++ D +
Sbjct: 300 SPLDFNDAALKNARKSFNRLGNTLDLLNDTVGDGQGKKTAGRLAREAEAFRSRVADCVAQ 359
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F M DD NT+ L F + IN +N + QP L L+ +R+ +L
Sbjct: 360 FEEAMDDDFNTALALAALFNMG-REINGFING-DQFQPTPGVLYLLAQIREY---YLNLL 414
Query: 433 RILGLLP 439
+LGL+P
Sbjct: 415 DVLGLVP 421
>gi|108808560|ref|YP_652476.1| cysteinyl-tRNA synthetase [Yersinia pestis Antiqua]
gi|108811182|ref|YP_646949.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|145599972|ref|YP_001164048.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides F]
gi|149365066|ref|ZP_01887101.1| cysteinyl-tRNA synthetase [Yersinia pestis CA88-4125]
gi|153947472|ref|YP_001401974.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
gi|162421370|ref|YP_001605813.1| cysteinyl-tRNA synthetase [Yersinia pestis Angola]
gi|165927660|ref|ZP_02223492.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|166011255|ref|ZP_02232153.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166214354|ref|ZP_02240389.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398585|ref|ZP_02304109.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422736|ref|ZP_02314489.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423331|ref|ZP_02315084.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|218930118|ref|YP_002347993.1| cysteinyl-tRNA synthetase [Yersinia pestis CO92]
gi|229838673|ref|ZP_04458832.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229896170|ref|ZP_04511340.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides A]
gi|229899240|ref|ZP_04514383.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229901410|ref|ZP_04516532.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|270489600|ref|ZP_06206674.1| cysteine--tRNA ligase [Yersinia pestis KIM D27]
gi|294504817|ref|YP_003568879.1| cysteinyl-tRNA synthetase [Yersinia pestis Z176003]
gi|384123284|ref|YP_005505904.1| cysteinyl-tRNA synthetase [Yersinia pestis D106004]
gi|384127139|ref|YP_005509753.1| cysteinyl-tRNA synthetase [Yersinia pestis D182038]
gi|384139080|ref|YP_005521782.1| cysteinyl-tRNA synthetase [Yersinia pestis A1122]
gi|420548145|ref|ZP_15045976.1| cysteine--tRNA ligase [Yersinia pestis PY-01]
gi|420553460|ref|ZP_15050726.1| cysteine--tRNA ligase [Yersinia pestis PY-02]
gi|420559037|ref|ZP_15055595.1| cysteine--tRNA ligase [Yersinia pestis PY-03]
gi|420564461|ref|ZP_15060440.1| cysteine--tRNA ligase [Yersinia pestis PY-04]
gi|420569501|ref|ZP_15065018.1| cysteine--tRNA ligase [Yersinia pestis PY-05]
gi|420575167|ref|ZP_15070142.1| cysteine--tRNA ligase [Yersinia pestis PY-06]
gi|420580485|ref|ZP_15074976.1| cysteine--tRNA ligase [Yersinia pestis PY-07]
gi|420585834|ref|ZP_15079824.1| cysteine--tRNA ligase [Yersinia pestis PY-08]
gi|420590946|ref|ZP_15084421.1| cysteine--tRNA ligase [Yersinia pestis PY-09]
gi|420596334|ref|ZP_15089269.1| cysteine--tRNA ligase [Yersinia pestis PY-10]
gi|420601996|ref|ZP_15094308.1| cysteine--tRNA ligase [Yersinia pestis PY-11]
gi|420607428|ref|ZP_15099212.1| cysteine--tRNA ligase [Yersinia pestis PY-12]
gi|420612817|ref|ZP_15104048.1| cysteine--tRNA ligase [Yersinia pestis PY-13]
gi|420618197|ref|ZP_15108746.1| cysteine--tRNA ligase [Yersinia pestis PY-14]
gi|420623493|ref|ZP_15113510.1| cysteine--tRNA ligase [Yersinia pestis PY-15]
gi|420628572|ref|ZP_15118118.1| cysteine--tRNA ligase [Yersinia pestis PY-16]
gi|420633693|ref|ZP_15122712.1| cysteine--tRNA ligase [Yersinia pestis PY-19]
gi|420638899|ref|ZP_15127398.1| cysteine--tRNA ligase [Yersinia pestis PY-25]
gi|420644384|ref|ZP_15132392.1| cysteine--tRNA ligase [Yersinia pestis PY-29]
gi|420649655|ref|ZP_15137163.1| cysteine--tRNA ligase [Yersinia pestis PY-32]
gi|420655294|ref|ZP_15142232.1| cysteine--tRNA ligase [Yersinia pestis PY-34]
gi|420660785|ref|ZP_15147156.1| cysteine--tRNA ligase [Yersinia pestis PY-36]
gi|420666090|ref|ZP_15151921.1| cysteine--tRNA ligase [Yersinia pestis PY-42]
gi|420670966|ref|ZP_15156357.1| cysteine--tRNA ligase [Yersinia pestis PY-45]
gi|420676308|ref|ZP_15161217.1| cysteine--tRNA ligase [Yersinia pestis PY-46]
gi|420681923|ref|ZP_15166294.1| cysteine--tRNA ligase [Yersinia pestis PY-47]
gi|420687244|ref|ZP_15171028.1| cysteine--tRNA ligase [Yersinia pestis PY-48]
gi|420692464|ref|ZP_15175609.1| cysteine--tRNA ligase [Yersinia pestis PY-52]
gi|420698237|ref|ZP_15180687.1| cysteine--tRNA ligase [Yersinia pestis PY-53]
gi|420704036|ref|ZP_15185317.1| cysteine--tRNA ligase [Yersinia pestis PY-54]
gi|420709438|ref|ZP_15190082.1| cysteine--tRNA ligase [Yersinia pestis PY-55]
gi|420714890|ref|ZP_15194936.1| cysteine--tRNA ligase [Yersinia pestis PY-56]
gi|420720394|ref|ZP_15199666.1| cysteine--tRNA ligase [Yersinia pestis PY-58]
gi|420725871|ref|ZP_15204476.1| cysteine--tRNA ligase [Yersinia pestis PY-59]
gi|420731467|ref|ZP_15209496.1| cysteine--tRNA ligase [Yersinia pestis PY-60]
gi|420736490|ref|ZP_15214034.1| cysteine--tRNA ligase [Yersinia pestis PY-61]
gi|420741963|ref|ZP_15218954.1| cysteine--tRNA ligase [Yersinia pestis PY-63]
gi|420747666|ref|ZP_15223787.1| cysteine--tRNA ligase [Yersinia pestis PY-64]
gi|420753121|ref|ZP_15228643.1| cysteine--tRNA ligase [Yersinia pestis PY-65]
gi|420758860|ref|ZP_15233290.1| cysteine--tRNA ligase [Yersinia pestis PY-66]
gi|420764162|ref|ZP_15237915.1| cysteine--tRNA ligase [Yersinia pestis PY-71]
gi|420769390|ref|ZP_15242606.1| cysteine--tRNA ligase [Yersinia pestis PY-72]
gi|420774374|ref|ZP_15247118.1| cysteine--tRNA ligase [Yersinia pestis PY-76]
gi|420779986|ref|ZP_15252059.1| cysteine--tRNA ligase [Yersinia pestis PY-88]
gi|420785573|ref|ZP_15256951.1| cysteine--tRNA ligase [Yersinia pestis PY-89]
gi|420790732|ref|ZP_15261580.1| cysteine--tRNA ligase [Yersinia pestis PY-90]
gi|420796262|ref|ZP_15266544.1| cysteine--tRNA ligase [Yersinia pestis PY-91]
gi|420801311|ref|ZP_15271084.1| cysteine--tRNA ligase [Yersinia pestis PY-92]
gi|420806674|ref|ZP_15275938.1| cysteine--tRNA ligase [Yersinia pestis PY-93]
gi|420812024|ref|ZP_15280749.1| cysteine--tRNA ligase [Yersinia pestis PY-94]
gi|420817545|ref|ZP_15285730.1| cysteine--tRNA ligase [Yersinia pestis PY-95]
gi|420822854|ref|ZP_15290497.1| cysteine--tRNA ligase [Yersinia pestis PY-96]
gi|420827943|ref|ZP_15295069.1| cysteine--tRNA ligase [Yersinia pestis PY-98]
gi|420833622|ref|ZP_15300202.1| cysteine--tRNA ligase [Yersinia pestis PY-99]
gi|420838498|ref|ZP_15304604.1| cysteine--tRNA ligase [Yersinia pestis PY-100]
gi|420843684|ref|ZP_15309311.1| cysteine--tRNA ligase [Yersinia pestis PY-101]
gi|420849347|ref|ZP_15314399.1| cysteine--tRNA ligase [Yersinia pestis PY-102]
gi|420854999|ref|ZP_15319197.1| cysteine--tRNA ligase [Yersinia pestis PY-103]
gi|420860203|ref|ZP_15323771.1| cysteine--tRNA ligase [Yersinia pestis PY-113]
gi|421764579|ref|ZP_16201368.1| cysteinyl-tRNA ligase [Yersinia pestis INS]
gi|21264007|sp|Q8ZCC0.1|SYC_YERPE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|123073499|sp|Q1CKY1.1|SYC_YERPN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|123372235|sp|Q1C4U1.1|SYC_YERPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187470969|sp|A7FL46.1|SYC_YERP3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187470970|sp|A4TP63.1|SYC_YERPP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558804|sp|A9R253.1|SYC_YERPG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|108774830|gb|ABG17349.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|108780473|gb|ABG14531.1| cysteinyl-tRNA synthetase [Yersinia pestis Antiqua]
gi|115348729|emb|CAL21675.1| cysteinyl-tRNA synthetase [Yersinia pestis CO92]
gi|145211668|gb|ABP41075.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides F]
gi|149291479|gb|EDM41553.1| cysteinyl-tRNA synthetase [Yersinia pestis CA88-4125]
gi|152958967|gb|ABS46428.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
gi|162354185|gb|ABX88133.1| cysteinyl-tRNA synthetase [Yersinia pestis Angola]
gi|165920414|gb|EDR37691.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989933|gb|EDR42234.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166204483|gb|EDR48963.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958327|gb|EDR55348.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051089|gb|EDR62497.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057501|gb|EDR67247.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229681339|gb|EEO77433.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|229687642|gb|EEO79715.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229695039|gb|EEO85086.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229701093|gb|EEO89122.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides A]
gi|262362880|gb|ACY59601.1| cysteinyl-tRNA synthetase [Yersinia pestis D106004]
gi|262366803|gb|ACY63360.1| cysteinyl-tRNA synthetase [Yersinia pestis D182038]
gi|270338104|gb|EFA48881.1| cysteine--tRNA ligase [Yersinia pestis KIM D27]
gi|294355276|gb|ADE65617.1| cysteinyl-tRNA synthetase [Yersinia pestis Z176003]
gi|342854209|gb|AEL72762.1| cysteinyl-tRNA synthetase [Yersinia pestis A1122]
gi|391423674|gb|EIQ86138.1| cysteine--tRNA ligase [Yersinia pestis PY-01]
gi|391424374|gb|EIQ86753.1| cysteine--tRNA ligase [Yersinia pestis PY-02]
gi|391424729|gb|EIQ87076.1| cysteine--tRNA ligase [Yersinia pestis PY-03]
gi|391438705|gb|EIQ99426.1| cysteine--tRNA ligase [Yersinia pestis PY-04]
gi|391439857|gb|EIR00474.1| cysteine--tRNA ligase [Yersinia pestis PY-05]
gi|391443572|gb|EIR03875.1| cysteine--tRNA ligase [Yersinia pestis PY-06]
gi|391455549|gb|EIR14656.1| cysteine--tRNA ligase [Yersinia pestis PY-07]
gi|391456444|gb|EIR15468.1| cysteine--tRNA ligase [Yersinia pestis PY-08]
gi|391458487|gb|EIR17345.1| cysteine--tRNA ligase [Yersinia pestis PY-09]
gi|391471519|gb|EIR29074.1| cysteine--tRNA ligase [Yersinia pestis PY-10]
gi|391472873|gb|EIR30293.1| cysteine--tRNA ligase [Yersinia pestis PY-11]
gi|391473719|gb|EIR31069.1| cysteine--tRNA ligase [Yersinia pestis PY-12]
gi|391487453|gb|EIR43379.1| cysteine--tRNA ligase [Yersinia pestis PY-13]
gi|391489029|gb|EIR44814.1| cysteine--tRNA ligase [Yersinia pestis PY-15]
gi|391489638|gb|EIR45367.1| cysteine--tRNA ligase [Yersinia pestis PY-14]
gi|391503544|gb|EIR57731.1| cysteine--tRNA ligase [Yersinia pestis PY-16]
gi|391503810|gb|EIR57967.1| cysteine--tRNA ligase [Yersinia pestis PY-19]
gi|391508889|gb|EIR62571.1| cysteine--tRNA ligase [Yersinia pestis PY-25]
gi|391519328|gb|EIR71970.1| cysteine--tRNA ligase [Yersinia pestis PY-29]
gi|391521221|gb|EIR73707.1| cysteine--tRNA ligase [Yersinia pestis PY-34]
gi|391522153|gb|EIR74563.1| cysteine--tRNA ligase [Yersinia pestis PY-32]
gi|391534333|gb|EIR85521.1| cysteine--tRNA ligase [Yersinia pestis PY-36]
gi|391537088|gb|EIR88010.1| cysteine--tRNA ligase [Yersinia pestis PY-42]
gi|391539374|gb|EIR90102.1| cysteine--tRNA ligase [Yersinia pestis PY-45]
gi|391552393|gb|EIS01819.1| cysteine--tRNA ligase [Yersinia pestis PY-46]
gi|391552769|gb|EIS02164.1| cysteine--tRNA ligase [Yersinia pestis PY-47]
gi|391553371|gb|EIS02701.1| cysteine--tRNA ligase [Yersinia pestis PY-48]
gi|391567328|gb|EIS15201.1| cysteine--tRNA ligase [Yersinia pestis PY-52]
gi|391568468|gb|EIS16184.1| cysteine--tRNA ligase [Yersinia pestis PY-53]
gi|391573381|gb|EIS20451.1| cysteine--tRNA ligase [Yersinia pestis PY-54]
gi|391581635|gb|EIS27496.1| cysteine--tRNA ligase [Yersinia pestis PY-55]
gi|391584036|gb|EIS29622.1| cysteine--tRNA ligase [Yersinia pestis PY-56]
gi|391594270|gb|EIS38438.1| cysteine--tRNA ligase [Yersinia pestis PY-58]
gi|391597353|gb|EIS41185.1| cysteine--tRNA ligase [Yersinia pestis PY-60]
gi|391598656|gb|EIS42350.1| cysteine--tRNA ligase [Yersinia pestis PY-59]
gi|391611769|gb|EIS53912.1| cysteine--tRNA ligase [Yersinia pestis PY-61]
gi|391612314|gb|EIS54398.1| cysteine--tRNA ligase [Yersinia pestis PY-63]
gi|391615548|gb|EIS57299.1| cysteine--tRNA ligase [Yersinia pestis PY-64]
gi|391624825|gb|EIS65408.1| cysteine--tRNA ligase [Yersinia pestis PY-65]
gi|391630058|gb|EIS69884.1| cysteine--tRNA ligase [Yersinia pestis PY-66]
gi|391635620|gb|EIS74755.1| cysteine--tRNA ligase [Yersinia pestis PY-71]
gi|391637683|gb|EIS76572.1| cysteine--tRNA ligase [Yersinia pestis PY-72]
gi|391647632|gb|EIS85241.1| cysteine--tRNA ligase [Yersinia pestis PY-76]
gi|391651309|gb|EIS88497.1| cysteine--tRNA ligase [Yersinia pestis PY-88]
gi|391656004|gb|EIS92682.1| cysteine--tRNA ligase [Yersinia pestis PY-89]
gi|391660617|gb|EIS96746.1| cysteine--tRNA ligase [Yersinia pestis PY-90]
gi|391668146|gb|EIT03408.1| cysteine--tRNA ligase [Yersinia pestis PY-91]
gi|391677645|gb|EIT11934.1| cysteine--tRNA ligase [Yersinia pestis PY-93]
gi|391678488|gb|EIT12696.1| cysteine--tRNA ligase [Yersinia pestis PY-92]
gi|391679224|gb|EIT13376.1| cysteine--tRNA ligase [Yersinia pestis PY-94]
gi|391691554|gb|EIT24472.1| cysteine--tRNA ligase [Yersinia pestis PY-95]
gi|391694557|gb|EIT27202.1| cysteine--tRNA ligase [Yersinia pestis PY-96]
gi|391696240|gb|EIT28745.1| cysteine--tRNA ligase [Yersinia pestis PY-98]
gi|391708199|gb|EIT39474.1| cysteine--tRNA ligase [Yersinia pestis PY-99]
gi|391711820|gb|EIT42751.1| cysteine--tRNA ligase [Yersinia pestis PY-100]
gi|391712687|gb|EIT43541.1| cysteine--tRNA ligase [Yersinia pestis PY-101]
gi|391724443|gb|EIT54019.1| cysteine--tRNA ligase [Yersinia pestis PY-102]
gi|391725375|gb|EIT54847.1| cysteine--tRNA ligase [Yersinia pestis PY-103]
gi|391727841|gb|EIT57009.1| cysteine--tRNA ligase [Yersinia pestis PY-113]
gi|411174690|gb|EKS44721.1| cysteinyl-tRNA ligase [Yersinia pestis INS]
Length = 461
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 248/421 (58%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M ++I AYV GDV FAV+ P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ G A PA + F M
Sbjct: 302 LNYSEENLKQARASLERLYTALR------------GTDANATPAGG---AEFEARFRTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + + + + E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKNED--------MAAANGLAAELRKLAQVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|51595384|ref|YP_069575.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
gi|186894407|ref|YP_001871519.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
gi|61216168|sp|Q66DK9.1|SYC_YERPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558803|sp|B2K7N2.1|SYC_YERPB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|51588666|emb|CAH20275.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
gi|186697433|gb|ACC88062.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
Length = 461
Score = 360 bits (924), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 248/421 (58%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M ++I AYV GDV FAV+ P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ G A PA + F M
Sbjct: 302 LNYSEENLKQARASLERLYTALR------------GTDANATPAGG---AEFEARFRTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + + + + E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKNED--------MAAANGLAAELRKLAQVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|292487539|ref|YP_003530411.1| cysteine tRNA synthetase [Erwinia amylovora CFBP1430]
gi|428784474|ref|ZP_19001965.1| cysteine tRNA synthetase [Erwinia amylovora ACW56400]
gi|291552958|emb|CBA20003.1| cysteine tRNA synthetase [Erwinia amylovora CFBP1430]
gi|426276036|gb|EKV53763.1| cysteine tRNA synthetase [Erwinia amylovora ACW56400]
Length = 502
Score = 360 bits (924), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 183/394 (46%), Positives = 241/394 (61%), Gaps = 22/394 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI GK+GMYVCG+T YDL H+GH R +FD++ RYL + ++
Sbjct: 42 LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQL 101
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA++ GE+ L+ R E D A L LPP +PR + H+ +I
Sbjct: 102 NYVRNITDIDDKIIKRAHENGESIEQLTQRMIGEMHKDFAALNILPPDLEPRATRHIAEI 161
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR-KRNPAD 196
+++ ++I + AYV GDV F+V+ YG LS Q L+ +AG RV V + KRNP D
Sbjct: 162 IELVEKLIAREHAYVASNGDVMFSVDSDLQYGSLSRQDLDQLQAGARVEVTADVKRNPMD 221
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +KA EP W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIA
Sbjct: 222 FVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIA 281
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS +A V+YWMH+G V + EKMSKSL NFFT+R + E Y +R+FL+S HYRS
Sbjct: 282 QSTSAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLEHYDAETVRYFLMSGHYRS 341
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
LNY L+ A A+ +Y L++ + +P AR F A
Sbjct: 342 QLNYGEDNLNQARSALERLYIALRNTDTGATPAGGEEFEAR---------------FRAA 386
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP 410
M DD NT + F + +N +K + P
Sbjct: 387 MDDDFNTPEAYSALFD-----LAREVNRMKAENP 415
>gi|163783157|ref|ZP_02178151.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881491|gb|EDP75001.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
Length = 489
Score = 360 bits (924), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 173/373 (46%), Positives = 238/373 (63%), Gaps = 2/373 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KI+N++T + E F P+ KV +Y CGVT YD SH+GH R+ + FD R+LEHL +V
Sbjct: 1 MKIHNTLTGKVEEFVPVNPPKVLIYTCGVTVYDDSHVGHGRSLIVFDTFRRFLEHLGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII RA + + ++++NRY Y DM ++ P +PRV++HM++I
Sbjct: 61 TFVRNFTDVDDKIINRAKEECTDFMTIANRYIASYYRDMEAIRVKPADVEPRVTEHMKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I +I AY +GDV+F+V +YG+LS + E AG RV +KR+P DFA
Sbjct: 121 VDVIQSLIEKGYAYESDGDVYFSVRSFKDYGKLSKRSPEEMEAGARVEPSEKKRDPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AKAGEPSWDSPWG GRPGWH EC AM +L DIHGGG+DL+FPHHENEIAQ+
Sbjct: 181 LWKSAKAGEPSWDSPWGKGRPGWHTECVAMIFKHLGETIDIHGGGLDLVFPHHENEIAQA 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YWMHNG VT +KMSKSLGN+ T+++I +YHP LR ++ HYRSPL
Sbjct: 241 EAVTGKPFARYWMHNGLVTVGGQKMSKSLGNYVTLKEIYTKYHPDILRLLVLFTHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++S +++ A + ++D EV L + +P D + ++ + F +S
Sbjct: 301 DFSWEKMEETQRAYDRLKGAIEDYEV-LKELEVIPGKGGAHPLY-DKVKEVEESFFESLS 358
Query: 379 DDLNTSHILTGAF 391
DD NT L+ F
Sbjct: 359 DDFNTPEALSHIF 371
>gi|422347491|ref|ZP_16428403.1| cysteinyl-tRNA synthetase [Clostridium perfringens WAL-14572]
gi|373223945|gb|EHP46286.1| cysteinyl-tRNA synthetase [Clostridium perfringens WAL-14572]
Length = 466
Score = 360 bits (924), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 174/408 (42%), Positives = 253/408 (62%), Gaps = 12/408 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++ ++KE F P+ G+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 2 IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGFKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I++AN+ G + + Y +EY D L T PR ++ + +I
Sbjct: 62 DFVQNFTDIDDKMIKKANEEGTTVKKIGDTYIKEYYQDADALNIERATVNPRATEFIGEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +++ AY V+GDV+F+ +K YG+LSGQ +E+ ++G R++VD RK++P DFA
Sbjct: 122 IKFVKGLVDKGYAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARISVDERKKDPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS
Sbjct: 182 IWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YW+H+ V NNEKMSKSL NFFT R+I ERY +R ++SAHYR L
Sbjct: 242 EALTGEPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVIRFLMLSAHYRQQL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDC-----EVALSPFQEHGKTARINPAAEDCINKLRDEF 373
N+S L+SA +V IY + + EV+ E K A + +NK ++++
Sbjct: 302 NFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEK------AYLESLNKYKEKY 355
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
+M DD NT+ +T F D +K N+++ + K+ Q+ L LI L
Sbjct: 356 IEKMDDDFNTADAITAIF-DLIKDTNTNITIDSSKELAQKALELIREL 402
>gi|152996132|ref|YP_001340967.1| cysteinyl-tRNA synthetase [Marinomonas sp. MWYL1]
gi|189082069|sp|A6VX53.1|SYC_MARMS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|150837056|gb|ABR71032.1| cysteinyl-tRNA synthetase [Marinomonas sp. MWYL1]
Length = 460
Score = 360 bits (924), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 190/421 (45%), Positives = 257/421 (61%), Gaps = 30/421 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN+++ +KE+F PI GKVGMYVCG T YD H+GHARA +SFD++ R++ HL E+
Sbjct: 2 LKIYNTLSGKKEIFKPIEEGKVGMYVCGNTVYDFCHIGHARAMISFDVISRFIRHLGYEL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E+ SL+ R D L P +P+ ++ M++I
Sbjct: 62 NYVRNITDVDDKIIKRAEENNESTQSLTERMIAAQREDELRLGNKMPDREPKATEFMQEI 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ +I+ AY GDV++ K +YG+L+ ++LE+ AG R+ V+ K +PADF
Sbjct: 122 IDMVQVLIDKGFAYQGTSGDVYYRATKFKDYGKLNNRKLEDMLAGARIDVEVAKEHPADF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGE SW SPWG GRPGWHIECSAMS + L S FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKQAKAGEVSWSSPWGEGRPGWHIECSAMSTNCLGSHFDIHGGGPDLKFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+YWMH G V NNEKMSKSLGNFFT+R + +++P +R+ ++S+ YRS
Sbjct: 242 SEAATGKEYVNYWMHCGAVRVNNEKMSKSLGNFFTVRDVLAKFNPEVVRYLMVSSQYRSA 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++YS L A A+ +Y L+ +VA S P + F M
Sbjct: 302 IDYSDQSLLEAKVALERLYTALRQQQVAES----------FEPTV------FTERFEEAM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ ++ F+ + LN K K + SL+ + E++ + +LGL
Sbjct: 346 KDDFNTAVAVSVLFE-----LVRELN--KAKTEDANKASLLAA------ELRSLAELLGL 392
Query: 438 L 438
L
Sbjct: 393 L 393
>gi|421556545|ref|ZP_16002460.1| cysteine--tRNA ligase [Neisseria meningitidis 80179]
gi|402337218|gb|EJU72468.1| cysteine--tRNA ligase [Neisseria meningitidis 80179]
Length = 473
Score = 360 bits (924), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 185/389 (47%), Positives = 236/389 (60%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKA KAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKATKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|344174361|emb|CCA86152.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Ralstonia syzygii
R24]
Length = 465
Score = 360 bits (924), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 185/383 (48%), Positives = 244/383 (63%), Gaps = 25/383 (6%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+LKIYN++ ++K+ F PI G+V MYVCG+T YD H+GHAR V FD++ R+L +
Sbjct: 3 SLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASGYD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKII+RA + GE +L+NR+ D L P ++PR ++++ Q
Sbjct: 63 VTYVRNITDIDDKIIKRAVENGETIGALTNRFIAAMHEDADALGVQRPDHEPRATEYVPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI ++ +N AY +GDV +AV K P YGRLSG+ LE+ RAGERVA + K++P D
Sbjct: 123 MLSMIGRLQDNGLAYQAADGDVNYAVRKFPGYGRLSGKSLEDLRAGERVAANDAKQDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK+AKA EP+ W SPWG GRPGWHIECSAMS L + FD+HGGG DL FPHHEN
Sbjct: 183 FVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQ+ A ++ V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y P +R F++ +H
Sbjct: 243 EIAQAEGANGNTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRFFILRSH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQD--CEVALSP--FQEHGKTARINPAAEDCINKL 369
YRS LNYS LD A A+ +Y L+D E P + HGK
Sbjct: 303 YRSDLNYSDAHLDDARHALTRLYTALKDVPAEADARPDWNEPHGK--------------- 347
Query: 370 RDEFHARMSDDLNTSHILTGAFQ 392
F M+DD NT + F+
Sbjct: 348 --RFREAMNDDFNTPVAMAALFE 368
>gi|345298190|ref|YP_004827548.1| cysteinyl-tRNA synthetase [Enterobacter asburiae LF7a]
gi|345092127|gb|AEN63763.1| cysteinyl-tRNA synthetase [Enterobacter asburiae LF7a]
Length = 461
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 192/431 (44%), Positives = 261/431 (60%), Gaps = 23/431 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L +
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIVEMHKDFDALNIQRPDSEPRATHHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+ ++I AYV + GDV F+V P YG+LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IDITEKLIERGHAYVADNGDVMFSVPTDPAYGKLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI---------NPAAEDCINK 368
LNYS L A A+ +Y L+ + +++ AR P A +
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSVAAAGGEAFEARFVEVMNDDFNTPEAYSVLFD 361
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK---------QPKQQQLSLIE 419
+ E + S+D+ ++ A L+ ++S L +L+++ Q +++ IE
Sbjct: 362 MAREVNRLKSEDMAAAN----ALASHLRKLSSVLGLLEQEPDVFLQSGAQADDGEVAEIE 417
Query: 420 SLRKIENEVKE 430
+L K E ++
Sbjct: 418 ALIKARLEARQ 428
>gi|407700517|ref|YP_006825304.1| cysteinyl-tRNA ligase [Alteromonas macleodii str. 'Black Sea 11']
gi|407249664|gb|AFT78849.1| cysteinyl-tRNA ligase [Alteromonas macleodii str. 'Black Sea 11']
Length = 460
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 190/421 (45%), Positives = 251/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN+ T++K F P+ GKVG+YVCG+T YDLSH+GHAR +SFD+L RY+ HL +V
Sbjct: 2 LHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYMRHLGLDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII RAN+ GE+ +L+ R D A + L P +P VS HM++I
Sbjct: 62 KYVRNITDIDDKIIARANENGESFEALTARTIGMMHEDFAAINLLEPDVEPTVSGHMDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++++ AY + GDV F V K +YG+LS Q L+ +AG RV V + K +P DF
Sbjct: 122 IAIIQRLMDKGYAYQAQSGDVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAAGKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK K GEP+W SPWG GRPGWHIECSAM+ +L + FDIHGGG DL FPHHENE+AQ
Sbjct: 182 VLWKTTKPGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH G V N+EKMSKSLGNFFT+R + + + LR FL+SAHYRS
Sbjct: 242 SCCAYDTPYVNVWMHTGMVQVNDEKMSKSLGNFFTLRDVLKEHDSETLRFFLMSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS + A A+ +Y L+ EV S +G F A M
Sbjct: 302 LSYSQDNITQAKAALERLYTALRGVEVDESTDLSYGGYLT--------------RFEAAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DDLN + F + LN K + +L+ + +K + ILG+
Sbjct: 348 NDDLNVPEAFSVLFD-----VARELNRQKDNADEAGKLAAV---------LKGLGAILGM 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|22125011|ref|NP_668434.1| cysteinyl-tRNA synthetase [Yersinia pestis KIM10+]
gi|45440695|ref|NP_992234.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
91001]
gi|21957858|gb|AAM84685.1|AE013714_1 cysteine tRNA synthetase [Yersinia pestis KIM10+]
gi|45435553|gb|AAS61111.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
91001]
Length = 476
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 194/427 (45%), Positives = 250/427 (58%), Gaps = 29/427 (6%)
Query: 13 PKMDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLE 72
P+ LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL
Sbjct: 11 PRNVPMLKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLR 70
Query: 73 HLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVS 132
+L +TYVRN TDVDDKII+RA + E L+ R E D L P +PR +
Sbjct: 71 YLGYSLTYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRAT 130
Query: 133 DHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRK 191
H+ +I +M ++I AYV GDV FAV+ P+YG LS Q L+ +AG RV V K
Sbjct: 131 HHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVADVK 190
Query: 192 RNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHH 251
RNP DF LWK +K GEP W+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHH
Sbjct: 191 RNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHH 250
Query: 252 ENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLIS 311
ENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S
Sbjct: 251 ENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMS 310
Query: 312 AHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD 371
HYRS LNYS L A ++ +Y L+ G A PA +
Sbjct: 311 GHYRSQLNYSEENLKQARASLERLYTALR------------GTDANATPAGG---AEFEA 355
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F M DD NT + F I +N LK + + + + E++++
Sbjct: 356 RFRTAMDDDFNTPEAYSVLFD-----IAREVNRLKNED--------MAAANGLAAELRKL 402
Query: 432 LRILGLL 438
++LGLL
Sbjct: 403 AQVLGLL 409
>gi|406040789|ref|ZP_11048144.1| cysteinyl-tRNA ligase [Acinetobacter ursingii DSM 16037 = CIP
107286]
Length = 473
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 186/421 (44%), Positives = 258/421 (61%), Gaps = 26/421 (6%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P V G++ +YVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRVDGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII RAN+ GE L+ R+ D A L C P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIISRANENGETIQQLTARFITAMNEDAASLGCAEPDESPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++ N AY GDV++ V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGTLVENGTAYPSSNGDVYYEVTKFAKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKA EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKANEPSWQSPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEAATGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S L A A+ Y + E Q +G+ ++ ++ + F++ M
Sbjct: 306 VNFSDTALKEAKTALTRFYHAFKAYE------QTYGQI-----HSDQLDHEFIERFNSAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F +N LN K+Q +Q +LR + ILGL
Sbjct: 355 RDDFNTPEAMAVLFD-----LNRELNRAVKEQCAEQAALYYATLRHLTT-------ILGL 402
Query: 438 L 438
+
Sbjct: 403 V 403
>gi|386388850|ref|ZP_10073696.1| cysteine--tRNA ligase [Haemophilus paraphrohaemolyticus HK411]
gi|385696993|gb|EIG27453.1| cysteine--tRNA ligase [Haemophilus paraphrohaemolyticus HK411]
Length = 459
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 253/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI +VGMYVCGVT YDL H GH R VSFD++ RYL + +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D L L P +PR + H+ +I
Sbjct: 62 CYVRNITDVDDKIIKRAIENNETCDQLVDRMIAEMHKDFDALNILRPDVEPRATHHISEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE P YG LS Q L+ +AG RV + S K+NP DF
Sbjct: 122 IAMVEKLIANGHAYVAADGDVMFDVESFPKYGALSRQNLDQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW+SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWESPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H G +T + EKMSKSLGNFF+IR + + Y +LR+F ++AHYRS
Sbjct: 242 SCCANHGNYVNYWLHTGMLTIDKEKMSKSLGNFFSIRYMLDLYDAESLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS+ L+ A A+ +Y L+ C++ + PA + + F M
Sbjct: 302 LDYSIDNLNLARSALERLYTALRGCDLTV-------------PAKGG--EQYVEAFKTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ I +N LK + E+ + +KE+ +LGL
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTEDA--------ETANGLAVCLKELAGVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|365969337|ref|YP_004950898.1| cysteinyl-tRNA synthetase [Enterobacter cloacae EcWSU1]
gi|365748250|gb|AEW72477.1| Cysteinyl-tRNA synthetase [Enterobacter cloacae EcWSU1]
Length = 465
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 198/425 (46%), Positives = 254/425 (59%), Gaps = 37/425 (8%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L +
Sbjct: 6 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 65
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L P +PR + H+ +I
Sbjct: 66 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNIQRPDSEPRATHHIHEI 125
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+ ++I AYV + GDV F+V P YG+LS Q L+ +AG RV V KRNP DF
Sbjct: 126 IDITEKLIERGHAYVADNGDVMFSVPTDPTYGQLSRQDLDQLQAGARVDVVDVKRNPMDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 246 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR- 376
LNYS L A A+ +Y L+ + ++ PAA + F AR
Sbjct: 306 LNYSEENLKQARAALERLYTALRGTDKSV-------------PAAGG------EAFEARF 346
Query: 377 ---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT + F A +N LK + +L LRK+ +
Sbjct: 347 IDVMNDDFNTPEAYSVLFDMA-----REVNRLKSEDMAAAN-ALASHLRKLSS------- 393
Query: 434 ILGLL 438
+LGLL
Sbjct: 394 VLGLL 398
>gi|292898782|ref|YP_003538151.1| cysteinyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
gi|291198630|emb|CBJ45738.1| cysteinyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
Length = 462
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 183/394 (46%), Positives = 241/394 (61%), Gaps = 22/394 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI GK+GMYVCG+T YDL H+GH R +FD++ RYL + ++
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA++ GE+ L+ R E D A L LPP +PR + H+ +I
Sbjct: 62 NYVRNITDIDDKIIKRAHENGESIEQLTQRMIGEMHKDFAALNILPPDLEPRATRHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR-KRNPAD 196
+++ ++I + AYV GDV F+V+ YG LS Q L+ +AG RV V + KRNP D
Sbjct: 122 IELVEKLIAREHAYVASNGDVMFSVDSDLQYGSLSRQDLDQLQAGARVEVTADVKRNPMD 181
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +KA EP W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIA
Sbjct: 182 FVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIA 241
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS +A V+YWMH+G V + EKMSKSL NFFT+R + E Y +R+FL+S HYRS
Sbjct: 242 QSTSAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLEHYDAETVRYFLMSGHYRS 301
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
LNY L+ A A+ +Y L++ + +P AR F A
Sbjct: 302 QLNYGEDNLNQARSALERLYIALRNTDTGATPAGGEEFEAR---------------FRAA 346
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP 410
M DD NT + F + +N +K + P
Sbjct: 347 MDDDFNTPEAYSALFD-----LAREVNRMKAENP 375
>gi|187631664|sp|A4W7I4.2|SYC_ENT38 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 461
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 191/421 (45%), Positives = 253/421 (60%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRFLGYTL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV GDV F+V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEITEKLIERGHAYVASNGDVMFSVPTDPGYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKTSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHGGEYVNYWMHSGMVMVDREKMSKSLDNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y ++ + +++P AR F M
Sbjct: 302 LNYSEENLKQARSALERLYIAVRGTDKSVAPAGGEAFEAR---------------FIDVM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + + + + + ++++ +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REINRLKVED--------VSAANALASHLRKLAAVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|329298451|ref|ZP_08255787.1| cysteinyl-tRNA synthetase [Plautia stali symbiont]
Length = 461
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 175/350 (50%), Positives = 232/350 (66%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE PI ++GMYVCG+T YDL H+GH R V+FD++ RYL ++ ++
Sbjct: 2 LKIYNTLSRQKEELKPIHACEIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYVGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ +L+NR E D A L LPP +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESIETLTNRMIAEMHKDFAALGILPPDLEPRATRHIGEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++I ++I+ AYV + GDV F V +YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELIGKLIDRGHAYVADNGDVMFDVLSDKDYGVLSRQDLEQLQAGARVEVAEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KA EP+W+SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 VLWKMSKADEPAWNSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LN L+ A A+ +Y L+ + + +P AR A +D N
Sbjct: 302 LNDGEDNLNQARAALERLYTALRHTDASATPAGGEAFEARFRTAMDDDFN 351
>gi|311280587|ref|YP_003942818.1| cysteinyl-tRNA synthetase [Enterobacter cloacae SCF1]
gi|308749782|gb|ADO49534.1| cysteinyl-tRNA synthetase [Enterobacter cloacae SCF1]
Length = 461
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 228/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ + L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVGLVDRMIIEMHKDFDALNILRPDNEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F+V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITERLIERGHAYVADNGDVMFSVPSDPTYGELSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KAGEP+W SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKAGEPAWASPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+ WMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNTWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + + + AR A +D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDASAAAAGGEAFEARFREAMDDDFN 351
>gi|59802301|ref|YP_209013.1| hypothetical protein NGO1993 [Neisseria gonorrhoeae FA 1090]
gi|240013127|ref|ZP_04720040.1| CysS [Neisseria gonorrhoeae DGI18]
gi|240015570|ref|ZP_04722110.1| CysS [Neisseria gonorrhoeae FA6140]
gi|240120198|ref|ZP_04733160.1| CysS [Neisseria gonorrhoeae PID24-1]
gi|81311142|sp|Q5F5D6.1|SYC_NEIG1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|59719196|gb|AAW90601.1| putative cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
Length = 473
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 237/389 (60%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELNARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 ---NGYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|284006809|emb|CBA72076.1| cysteinyl-tRNA synthetase [Arsenophonus nasoniae]
Length = 504
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 197/421 (46%), Positives = 252/421 (59%), Gaps = 28/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI GK+GMYVCGVT YDL H+GH R V+FD++ RYL +L ++
Sbjct: 43 LKIYNTLSRQKEEFRPITPGKIGMYVCGVTIYDLCHIGHGRTFVAFDVISRYLRYLGYDL 102
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E +L++R E D L L P ++P + H+++I
Sbjct: 103 TYVRNITDVDDKIIKRAAENNETCDALTSRMLIEMYKDFDALNILRPDFEPNATHHIKEI 162
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ +++ AY+ + GDV FA+ P+YG LS Q LE +AG RV V KRNP DF
Sbjct: 163 IALTERLLKRGHAYIADNGDVMFAINSDPDYGLLSRQDLEQLQAGARVEVADVKRNPLDF 222
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 223 VLWKMSKPNEPSWSSPWGDGRPGWHIECSAMNGKQLGEHFDIHGGGADLMFPHHENEIAQ 282
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 283 STCANDGPYVNYWMHTGMVMVDREKMSKSLNNFFTIRDVLAHYDAETVRYFLLSGHYRSQ 342
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A ++ +Y L+D + H K+ A++ I K R F A M
Sbjct: 343 LNYTEENLKQARTSLERLYTALRDTDA------NHVKS------ADNEIFKQR--FMAAM 388
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK L LR++ N ILGL
Sbjct: 389 NDDFNTPEAYSVLFDLA-----REINRLKVDDMAMAN-ELAVQLRQLAN-------ILGL 435
Query: 438 L 438
L
Sbjct: 436 L 436
>gi|168206821|ref|ZP_02632826.1| cysteinyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
gi|170661739|gb|EDT14422.1| cysteinyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
Length = 466
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 174/408 (42%), Positives = 253/408 (62%), Gaps = 12/408 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++ ++KE F P+ G+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 2 IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGFKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I++AN+ G + + Y +EY D L T PR ++ + +I
Sbjct: 62 DFVQNFTDIDDKMIKKANEEGTTVKKIGDTYIKEYYQDADALNIERATVNPRATEFIGEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +++ AY V+GDV+F+ +K YG+LSGQ +E+ ++G R++VD RK++P DFA
Sbjct: 122 IKFVKGLVDKGYAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARISVDERKKDPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS
Sbjct: 182 IWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YW+H+ V NNEKMSKSL NFFT R+I ERY +R ++SAHYR L
Sbjct: 242 EALTGEPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVIRFLMLSAHYRQQL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDC-----EVALSPFQEHGKTARINPAAEDCINKLRDEF 373
N+S L+SA +V IY + + EV+ E K A + +NK ++++
Sbjct: 302 NFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEK------AYLESLNKYKEKY 355
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
+M DD NT+ +T F D +K N+++ + K+ Q+ L LI L
Sbjct: 356 IEKMDDDFNTADAITAIF-DLIKDTNTNITIDSSKELAQKALELIREL 402
>gi|294671003|ref|ZP_06735859.1| hypothetical protein NEIELOOT_02710 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307490|gb|EFE48733.1| hypothetical protein NEIELOOT_02710 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 473
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 185/391 (47%), Positives = 238/391 (60%), Gaps = 30/391 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T++KE F PI V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 2 LTIYNTLTRKKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I N AY GDV++AV + YG+LSG+ L++ RAG+RV VD KR+P DF
Sbjct: 122 IAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGKRVEVDGFKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYH 301
S A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y
Sbjct: 242 SVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYD 301
Query: 302 PLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPA 361
P +R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 302 PEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFELSENA-------- 353
Query: 362 AEDCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 -----NDYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|427403812|ref|ZP_18894694.1| cysteinyl-tRNA synthetase [Massilia timonae CCUG 45783]
gi|425717481|gb|EKU80439.1| cysteinyl-tRNA synthetase [Massilia timonae CCUG 45783]
Length = 464
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 194/424 (45%), Positives = 252/424 (59%), Gaps = 31/424 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ + K++F P V GKVGMYVCG+T YD H+GHAR ++FD++YR+L EV
Sbjct: 4 LKIYNTLARDKQVFVPKVAGKVGMYVCGMTVYDYCHVGHARMMMAFDVVYRWLMASGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKIIRRA + GE +L+ R+ + D L LPPT PR ++++ +
Sbjct: 64 NYVRNITDIDDKIIRRAVENGETIGALTKRFEKYMDEDTDALGILPPTVVPRATEYVPHM 123
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++ AY E GDV +AV YG+LSG+ L++ RAGERV V + KR+P DF
Sbjct: 124 LSIIEKLEQKGLAYQTEDGDVNYAVRGFDGYGKLSGKSLDDLRAGERVDVKTAKRDPLDF 183
Query: 198 ALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWKAAK EP WDS WG GRPGWHIECSAMS L FDIHGGG DL FPHHENE
Sbjct: 184 VLWKAAKESEPLEAKWDSQWGRGRPGWHIECSAMSCATLGEHFDIHGGGADLQFPHHENE 243
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A V+YW+HNG V +NEKMSKSLGNFFTIR++ +Y +R F++ AHY
Sbjct: 244 IAQSEGAFGGPMVNYWIHNGFVRVDNEKMSKSLGNFFTIREVLAKYDAEVVRFFILRAHY 303
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDC-----EVALSPFQEHGKTARINPAAEDCINKL 369
RSPLNYS + +D A A+ +Y L D E+A+ + H K
Sbjct: 304 RSPLNYSDVHIDDARGALTRLYTALADVDLGDGELAVDWDEAHAK--------------- 348
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
F M DD NT + F + S +N K + +Q +L L +E +
Sbjct: 349 --RFRDAMDDDFNTPLAVAELFD-----LASEVNRGKSVETARQLKALAAVLGLLERAPQ 401
Query: 430 EVLR 433
L+
Sbjct: 402 AFLQ 405
>gi|54294205|ref|YP_126620.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Lens]
gi|61216142|sp|Q5WX29.1|SYC_LEGPL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|53754037|emb|CAH15510.1| cysteine tRNA synthetase [Legionella pneumophila str. Lens]
gi|307610020|emb|CBW99553.1| cysteine tRNA synthetase [Legionella pneumophila 130b]
Length = 456
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 180/379 (47%), Positives = 243/379 (64%), Gaps = 19/379 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YNS+T++KE F + GK+GMYVCG+T YD HLGHAR+ V+FD++ RYL +V
Sbjct: 2 LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA++ + L+ +Y D L LPP ++PR + H+E I
Sbjct: 62 TYVRNITDIDDKIIARASERDVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I +++ AYV E GDV + V+ P YG+LS + +E +G RV + KR+P DF
Sbjct: 122 IRLIQRLLEKGNAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEPSW SPWG GRPGWHIECSAM+ H L +FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +YW+H G + N EKM+KS+GNF+TI + + +HP +R+FL+S+HYRSP
Sbjct: 242 SEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
LNYS L +A A+ +YQ ++D + A S E+ +++F+
Sbjct: 302 LNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEY----------------WQEQFNQ 345
Query: 376 RMSDDLNTSHILTGAFQDA 394
M+DD NT L+ FQ A
Sbjct: 346 AMNDDFNTPVALSVLFQLA 364
>gi|170025371|ref|YP_001721876.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
gi|229558805|sp|B1JHJ1.1|SYC_YERPY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169751905|gb|ACA69423.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
Length = 461
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 248/421 (58%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M ++I AYV GDV FAV+ P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ G A PA + F M
Sbjct: 302 LNYSEENLKQARASLERLYTALR------------GTDANATPAGG---VEFEARFRTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + + + + E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKNED--------MAAANGLAAELRKLAQVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|120554762|ref|YP_959113.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
gi|187629847|sp|A1U1Q7.1|SYC_MARAV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120324611|gb|ABM18926.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
Length = 463
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 188/369 (50%), Positives = 234/369 (63%), Gaps = 19/369 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++TQQKE F + GKV MYVCG+T YD HLGHAR V+FD++ RYL H +V
Sbjct: 1 MRIYNTLTQQKEAFKTLEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVVTRYLRHRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKI+RRA++ GE L++R + D A L L P +PR + ++ I
Sbjct: 61 HYVRNITDIDDKILRRADENGEVYTDLTDRMIRAMHEDEAKLGVLSPNEEPRATAFIDDI 120
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I AY + GDV+FAVE P+YG+LS ++LE+ AG RV V KR+PADF
Sbjct: 121 IAMIQKLIAGGHAYAADNGDVYFAVESFPDYGKLSKKKLEDLVAGARVDVQEAKRSPADF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GE SW SPWG GRPGWHIECSAMS L FDIHGGG DL+FPHHENEIAQ
Sbjct: 181 ALWKAAKPGEVSWQSPWGEGRPGWHIECSAMSTKCLGDTFDIHGGGPDLLFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V WMH G + N EKMSKSLGNFFTIR+I E+Y +R+FL+S+HYRS
Sbjct: 241 SECATGHTFVHTWMHAGAIRVNKEKMSKSLGNFFTIREILEKYPAEVVRYFLVSSHYRSQ 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRD-EFHA 375
++YS L A + +Y L+ I PA E D D F
Sbjct: 301 VDYSEDNLAEAGRTLTKLYHALRG----------------IVPAKEADVAETDHDRRFAE 344
Query: 376 RMSDDLNTS 384
M DD NT+
Sbjct: 345 VMDDDFNTA 353
>gi|310659543|ref|YP_003937264.1| cysteinyl-tRNA synthetase [[Clostridium] sticklandii]
gi|308826321|emb|CBH22359.1| cysteinyl-tRNA synthetase [[Clostridium] sticklandii]
Length = 466
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 184/417 (44%), Positives = 254/417 (60%), Gaps = 15/417 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN++T+QKE F P+ K+ MYVCG T Y+ H+G+AR + FD Y+E+ EV
Sbjct: 1 MKIYNTLTRQKETFIPLEENKIKMYVCGPTVYNFFHIGNARPFMIFDAFRNYMEYRGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII+RAN+ G +P+ ++ +Y EY D L T PRV++++E I
Sbjct: 61 TYVQNFTDVDDKIIKRANEEGISPIEVAEKYIAEYFKDADALGIKRATVHPRVTENIENI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I +I+ AY + GDV+F + YG+LS Q LE G R+ V+ K++P DFA
Sbjct: 121 ITFIEDLISKGFAYELNGDVYFNSQAYKEYGKLSKQNLEELNLGARIDVNDEKKHPIDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GE W SPWG GRPGWHIECS MSA YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAKKEGEIGWQSPWGEGRPGWHIECSVMSARYLGDTIDIHAGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YWMHNG++ +N+KMSKSLGNFFT+R I + +R FL+SAHYR+P+
Sbjct: 241 EARSGKQFARYWMHNGYINVDNQKMSKSLGNFFTVRDILSEFSGQVIRFFLLSAHYRNPV 300
Query: 319 NYS---VLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDE 372
N+S +LQ + + L + + L H K ++N + + ++ L RD
Sbjct: 301 NFSKELILQAKAG-------MERLANSKERLVFTISHAK-GQMNESELELVSALENHRDR 352
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
F M DD+NT+ ++ F+ A +F N+++ + ++ LSL L + N +K
Sbjct: 353 FIEAMDDDINTADAISIIFELA-RFSNTNVTENSSLEWAEKNLSLFNELTGVLNIIK 408
>gi|282857764|ref|ZP_06266973.1| cysteine--tRNA ligase [Pyramidobacter piscolens W5455]
gi|282584434|gb|EFB89793.1| cysteine--tRNA ligase [Pyramidobacter piscolens W5455]
Length = 474
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 183/423 (43%), Positives = 261/423 (61%), Gaps = 12/423 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN +T++KE F P+ GKV Y CG T YD H+G+AR + FD+L RYLE
Sbjct: 1 MALALYNDLTRKKEPFVPLHEGKVAFYSCGPTVYDYFHIGNARPFIVFDVLRRYLEFRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVT+V+NFTD+DDK+I RAN G L+ + +Y D L ++ PR ++++
Sbjct: 61 EVTFVQNFTDIDDKMIARANRDGVTVQQLAEKTIADYYEDADALGIKRASFYPRATEYIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I MI +II+N AYV +G VFF V+ P YG+LS Q L++ ++G R+ VD KR+P D
Sbjct: 121 KIIAMIQRIIDNGHAYVADGTVFFDVKSFPAYGKLSHQNLDDLQSGARIEVDDVKRSPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK K GEP+W+SPWG GRPGWHIECSAMS L DIH GGIDL+FPHHENEIA
Sbjct: 181 FVLWKPQKPGEPAWESPWGLGRPGWHIECSAMSTDLLGDTVDIHTGGIDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ AA V YW+HN ++ N EKMSKSLGNF T R +++ PLA+R F++ AHYRS
Sbjct: 241 QTEAATGKPFVKYWLHNEYILINAEKMSKSLGNFLTARAARQKFPPLAIRMFMLGAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
P+N++ L+ A+ AV + L++C ++ + G+T+ A ++ R +F
Sbjct: 301 PINFTPEGLEQAAAAV----ERLRNCWSDLQFAKGGRLGETSAAGAALMAALDTFRADFT 356
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
A M DD NT+ + G +A+ +N L +K P + + + K ++ V+ I
Sbjct: 357 AAMDDDFNTAAAI-GVIFEAVTEVNKYLKGNEKLDP-----AAVAAAEKFFGDIDSVMGI 410
Query: 435 LGL 437
+G+
Sbjct: 411 IGI 413
>gi|253988481|ref|YP_003039837.1| cysteinyl-tRNA synthetase [Photorhabdus asymbiotica]
gi|253779931|emb|CAQ83092.1| cysteinyl-tRNA synthetase [Photorhabdus asymbiotica]
Length = 461
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 193/433 (44%), Positives = 259/433 (59%), Gaps = 27/433 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G VGMYVCG+T YDL H+GH R V+FD++ RYL +L ++
Sbjct: 2 LKIFNTLSRQKEEFKPIHPGIVGMYVCGITIYDLCHIGHGRTFVAFDVIARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E+ L++R E D L L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAAENHESCDDLTSRMLAEMYKDFDALNILRPDLEPRATRHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F+VE +YG LS Q L +AG RV V KRNP DF
Sbjct: 122 IELTESLIKRGHAYVADNGDVMFSVESDSDYGALSRQDLSQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGKGRPGWHIECSAMNGKQLGNHFDIHGGGADLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLKYYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK--------- 368
LNY+ L A A+ +Y L+ + ++SP AR A D N
Sbjct: 302 LNYTEENLKQARTALERLYTALRGTDASVSPAGGEVFEARFIEAMNDDFNTPEAYSVLFD 361
Query: 369 LRDEFHARMSDDLNTSHILTGAF-----------QDALKFINSSLNMLKKKQPKQQQLSL 417
+ E + S+DL+ ++ L QD +F++S + Q + ++
Sbjct: 362 MAREINCLKSEDLSAANGLAAVLRKLAGILGLLEQDPEQFLHSGV------QVDDEDIAK 415
Query: 418 IESLRKIENEVKE 430
IE+L K N+ ++
Sbjct: 416 IEALIKQRNDARK 428
>gi|385337194|ref|YP_005891067.1| cysteinyl-tRNA synthetase [Neisseria meningitidis WUE 2594]
gi|319409608|emb|CBY89907.1| cysteinyl-tRNA synthetase (cysteine-tRNA ligase; CysRS) [Neisseria
meningitidis WUE 2594]
Length = 699
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 184/389 (47%), Positives = 238/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 290 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 469
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 470 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 530 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 576
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+ + F+ M+DD +T + F+
Sbjct: 577 EAGDDYTRRFYVAMNDDFDTVKAVAVLFE 605
>gi|110803392|ref|YP_699686.1| cysteinyl-tRNA synthetase [Clostridium perfringens SM101]
gi|122956489|sp|Q0SQC1.1|SYC_CLOPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|110683893|gb|ABG87263.1| cysteine--tRNA ligase [Clostridium perfringens SM101]
Length = 466
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 174/408 (42%), Positives = 253/408 (62%), Gaps = 12/408 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++ ++KE F P+ G+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 2 IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGFKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I++AN+ G + + Y +EY D L T PR ++ + +I
Sbjct: 62 DFVQNFTDIDDKMIKKANEEGITVKKIGDTYIKEYYQDADALNIERATVNPRATEFIGEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +++ AY V+GDV+F+ +K YG+LSGQ +E+ ++G R++VD RK++P DFA
Sbjct: 122 IKFVKGLVDKGYAYEVDGDVYFSTKKFEGYGKLSGQNIEDLQSGARISVDERKKDPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS
Sbjct: 182 IWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YW+H+ V NNEKMSKSL NFFT R+I ERY +R ++SAHYR L
Sbjct: 242 EALTGEPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVIRFLMLSAHYRQQL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDC-----EVALSPFQEHGKTARINPAAEDCINKLRDEF 373
N+S L+SA +V IY + + EV+ E K A + +NK ++++
Sbjct: 302 NFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEK------AYLESLNKYKEKY 355
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
+M DD NT+ +T F D +K N+++ + K+ Q+ L LI L
Sbjct: 356 IEKMDDDFNTADAITAIF-DLIKDTNTNITIDSSKELAQKALELIREL 402
>gi|268591223|ref|ZP_06125444.1| cysteine--tRNA ligase [Providencia rettgeri DSM 1131]
gi|291313193|gb|EFE53646.1| cysteine--tRNA ligase [Providencia rettgeri DSM 1131]
Length = 462
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 192/425 (45%), Positives = 254/425 (59%), Gaps = 37/425 (8%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD + RYL +L ++
Sbjct: 2 LQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E+ +L+ R E D L L P +PR + H+ +I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVEALTTRMLAEMHKDFDALNILRPDSEPRATRHIGEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV GDV F V+ PNYG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELTQSLIERGHAYVAANGDVMFEVKTDPNYGLLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + E Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR- 376
LNY+ L A A+ +Y L+ + + P DEF AR
Sbjct: 302 LNYTEENLKQARSALERMYTALRGTDKSAVPAGG-------------------DEFKARF 342
Query: 377 ---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT + F D ++ +N + K + +S + +++E+
Sbjct: 343 IEAMNDDFNTPEAYSVLF-DMVREVN---------RLKSEDMSAANGMAA---QLRELAS 389
Query: 434 ILGLL 438
+LGLL
Sbjct: 390 VLGLL 394
>gi|121635739|ref|YP_975984.1| cysteinyl-tRNA synthetase [Neisseria meningitidis FAM18]
gi|120867445|emb|CAM11217.1| cysteinyl-tRNA synthetase [Neisseria meningitidis FAM18]
Length = 699
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 184/389 (47%), Positives = 238/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 469
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 470 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 530 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 576
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+ + F+ M+DD +T + F+
Sbjct: 577 EADDDYTRRFYVAMNDDFDTVKAVAVLFE 605
>gi|437755435|ref|ZP_20834252.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435310569|gb|ELO84997.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
Length = 477
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 177/350 (50%), Positives = 228/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K +N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 18 VKNFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 77
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 78 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 137
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 138 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 197
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 198 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 257
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 258 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 317
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A ++ +Y L+ + + +P AR A D N
Sbjct: 318 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFN 367
>gi|15677904|ref|NP_275072.1| cysteinyl-tRNA synthetase [Neisseria meningitidis MC58]
gi|385854125|ref|YP_005900639.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|416198682|ref|ZP_11619049.1| cysteinyl-tRNA synthetase [Neisseria meningitidis CU385]
gi|433466065|ref|ZP_20423533.1| cysteine--tRNA ligase [Neisseria meningitidis NM422]
gi|433491440|ref|ZP_20448549.1| cysteine--tRNA ligase [Neisseria meningitidis NM418]
gi|433505933|ref|ZP_20462861.1| cysteine--tRNA ligase [Neisseria meningitidis 9506]
gi|433508075|ref|ZP_20464969.1| cysteine--tRNA ligase [Neisseria meningitidis 9757]
gi|433510233|ref|ZP_20467087.1| cysteine--tRNA ligase [Neisseria meningitidis 12888]
gi|433512288|ref|ZP_20469096.1| cysteine--tRNA ligase [Neisseria meningitidis 4119]
gi|30316184|sp|Q9JXE6.1|SYC_NEIMB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|7227346|gb|AAF42401.1| cysteinyl-tRNA synthetase [Neisseria meningitidis MC58]
gi|325139404|gb|EGC61944.1| cysteinyl-tRNA synthetase [Neisseria meningitidis CU385]
gi|325201129|gb|ADY96584.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|432200267|gb|ELK56364.1| cysteine--tRNA ligase [Neisseria meningitidis NM422]
gi|432225192|gb|ELK80945.1| cysteine--tRNA ligase [Neisseria meningitidis NM418]
gi|432238457|gb|ELK94023.1| cysteine--tRNA ligase [Neisseria meningitidis 9506]
gi|432238657|gb|ELK94222.1| cysteine--tRNA ligase [Neisseria meningitidis 9757]
gi|432244477|gb|ELK99965.1| cysteine--tRNA ligase [Neisseria meningitidis 12888]
gi|432244649|gb|ELL00134.1| cysteine--tRNA ligase [Neisseria meningitidis 4119]
Length = 473
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 184/389 (47%), Positives = 239/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F+PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+ + F+ M+DD +T + F+
Sbjct: 351 EAGDDYTRRFYVAMNDDFDTVKAVAVLFE 379
>gi|251788870|ref|YP_003003591.1| cysteinyl-tRNA synthetase [Dickeya zeae Ech1591]
gi|247537491|gb|ACT06112.1| cysteinyl-tRNA synthetase [Dickeya zeae Ech1591]
Length = 461
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 176/350 (50%), Positives = 227/350 (64%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L +V
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE L+NR E D L L P +PR + ++ +I
Sbjct: 62 KYVRNITDIDDKIIKRATENGETIEQLTNRMIGEMHTDFQALNILSPDEEPRATHYIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F+V+ +P YG LS Q L+ +AG RV + KRNP DF
Sbjct: 122 IELVEKLIARRHAYVADNGDVMFSVDTAPGYGVLSRQDLDQLKAGARVEITEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KAGEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKAGEPSWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFT+R + Y +R+FLIS HYRS
Sbjct: 242 STCAHGGDYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLTHYDAETIRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNY+ L A ++ +Y L+ + + S R A +D N
Sbjct: 302 LNYTEENLKQARASLERLYTALRGTDASASAAGGEAFERRFRDAMDDDFN 351
>gi|407684266|ref|YP_006799440.1| cysteinyl-tRNA ligase [Alteromonas macleodii str. 'English Channel
673']
gi|407245877|gb|AFT75063.1| cysteinyl-tRNA ligase [Alteromonas macleodii str. 'English Channel
673']
Length = 460
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 191/421 (45%), Positives = 251/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN+ T++K F P+ GKVG+YVCG+T YDLSH+GHAR +SFD+L RY+ HL +V
Sbjct: 2 LHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYMRHLGLDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII RAN+ GE+ +L+ R D A + L P +P VS HM++I
Sbjct: 62 KYVRNITDIDDKIIARANENGESFEALTARTIAMMHEDFAAINLLEPDVEPTVSGHMDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++++ AY + GDV F V K +YG+LS Q L+ +AG RV V + K +P DF
Sbjct: 122 IAIIQRLMDKGYAYQAKSGDVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAAGKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK K GEP+W SPWG GRPGWHIECSAM+ +L + FDIHGGG DL FPHHENE+AQ
Sbjct: 182 VLWKTTKPGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH G V N+EKMSKSLGNFFT+R + + + LR FL+SAHYRS
Sbjct: 242 SCCAYDTPYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVLKEHDSETLRFFLMSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS + A A+ +Y L+ V S HG F A M
Sbjct: 302 LSYSQDNITQAKAALERLYTALRGVTVDESTELNHGGYLT--------------RFEAAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DDLN + F D + +N +Q +E K+ +K + ILG+
Sbjct: 348 NDDLNVPEAFSVLF-DVARELN-------------RQKDNVEEAGKLAAVLKGLGAILGM 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|313667586|ref|YP_004047870.1| cysteinyl-trna synthetase [Neisseria lactamica 020-06]
gi|313005048|emb|CBN86480.1| cysteinyl-trna synthetase (ec 6.1.1.16) (cysteine--trna ligase)
(cysrs) [Neisseria lactamica 020-06]
Length = 473
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 183/389 (47%), Positives = 240/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YN++T+QKE F+PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 LYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGKGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+ + F+ M+DD +T + F+
Sbjct: 351 EAGDDYTRRFYVAMNDDFDTVKAVAVLFE 379
>gi|344167043|emb|CCA79234.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [blood disease
bacterium R229]
Length = 465
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 184/383 (48%), Positives = 244/383 (63%), Gaps = 25/383 (6%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+LKIYN++ ++K+ F PI G+V MYVCG+T YD H+GHAR V FD++ R+L +
Sbjct: 3 SLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASGYD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKII+R+ + GE +L+NR+ D L P ++PR ++++ Q
Sbjct: 63 VTYVRNITDIDDKIIKRSVENGETIGALTNRFIAAMHEDADTLGVQRPDHEPRATEYVPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI ++ +N AY +GDV +AV K P YGRLSG+ LE+ RAGERVA + K++P D
Sbjct: 123 MLSMIGRLQDNGLAYQAADGDVNYAVRKFPGYGRLSGKSLEDLRAGERVAANDAKQDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK+AKA EP+ W SPWG GRPGWHIECSAMS L + FD+HGGG DL FPHHEN
Sbjct: 183 FVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCELLGAHFDLHGGGADLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQ+ A ++ V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y P +R F++ +H
Sbjct: 243 EIAQAEGANGNTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRFFILRSH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQD--CEVALSP--FQEHGKTARINPAAEDCINKL 369
YRS LNYS LD A A+ +Y L+D E P + HGK
Sbjct: 303 YRSDLNYSDAHLDDARHALTRLYTALKDVPAEADARPDWNEPHGK--------------- 347
Query: 370 RDEFHARMSDDLNTSHILTGAFQ 392
F M+DD NT + F+
Sbjct: 348 --RFREAMNDDFNTPVAMAALFE 368
>gi|398800481|ref|ZP_10559753.1| cysteinyl-tRNA synthetase [Pantoea sp. GM01]
gi|398095648|gb|EJL85984.1| cysteinyl-tRNA synthetase [Pantoea sp. GM01]
Length = 461
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 175/350 (50%), Positives = 230/350 (65%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI G++GMYVCG+T YDL H+GH R V+FD++ RYL ++ ++
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGEIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYVGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN GE+ +L+NR E D A L LPP +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANQNGESIETLTNRMIAEMHNDFAALGILPPDLEPRATRHIDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +I + AYV + GDV F V YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELVGTLIERNHAYVADNGDVMFDVLSDKAYGVLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KA EP+W+SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 VLWKMSKADEPAWNSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMVDREKMSKSLDNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNY L+ A A+ +Y L+ + + AR A +D N
Sbjct: 302 LNYGEDNLNQARAALERLYTALRHTDANATAAGGEEFEARFRSAMDDDFN 351
>gi|421545409|ref|ZP_15991472.1| cysteine--tRNA ligase [Neisseria meningitidis NM140]
gi|421547458|ref|ZP_15993493.1| cysteine--tRNA ligase [Neisseria meningitidis NM183]
gi|421549491|ref|ZP_15995504.1| cysteine--tRNA ligase [Neisseria meningitidis NM2781]
gi|421551603|ref|ZP_15997590.1| cysteine--tRNA ligase [Neisseria meningitidis 69166]
gi|421553643|ref|ZP_15999602.1| cysteine--tRNA ligase [Neisseria meningitidis NM576]
gi|421567919|ref|ZP_16013650.1| cysteine--tRNA ligase [Neisseria meningitidis NM3001]
gi|433472311|ref|ZP_20429687.1| cysteine--tRNA ligase [Neisseria meningitidis 68094]
gi|433478638|ref|ZP_20435944.1| cysteine--tRNA ligase [Neisseria meningitidis 70012]
gi|433527099|ref|ZP_20483716.1| cysteine--tRNA ligase [Neisseria meningitidis 69096]
gi|433539845|ref|ZP_20496309.1| cysteine--tRNA ligase [Neisseria meningitidis 70030]
gi|402320768|gb|EJU56249.1| cysteine--tRNA ligase [Neisseria meningitidis NM183]
gi|402320956|gb|EJU56436.1| cysteine--tRNA ligase [Neisseria meningitidis NM140]
gi|402323198|gb|EJU58644.1| cysteine--tRNA ligase [Neisseria meningitidis NM2781]
gi|402326610|gb|EJU62009.1| cysteine--tRNA ligase [Neisseria meningitidis 69166]
gi|402327463|gb|EJU62851.1| cysteine--tRNA ligase [Neisseria meningitidis NM576]
gi|402342864|gb|EJU78020.1| cysteine--tRNA ligase [Neisseria meningitidis NM3001]
gi|432206264|gb|ELK62273.1| cysteine--tRNA ligase [Neisseria meningitidis 68094]
gi|432212918|gb|ELK68849.1| cysteine--tRNA ligase [Neisseria meningitidis 70012]
gi|432257916|gb|ELL13208.1| cysteine--tRNA ligase [Neisseria meningitidis 69096]
gi|432270890|gb|ELL26023.1| cysteine--tRNA ligase [Neisseria meningitidis 70030]
Length = 473
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 184/389 (47%), Positives = 239/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F+PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+ + F+ M+DD +T + F+
Sbjct: 351 EAGDDYTRRFYVAMNDDFDTVKAVAVLFE 379
>gi|325295505|ref|YP_004282019.1| cysteinyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065953|gb|ADY73960.1| cysteinyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 472
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 188/421 (44%), Positives = 263/421 (62%), Gaps = 13/421 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++++N++T++KE F P+ V MYVCG T YD +H+GHAR+A+ FD++ R+ E+ V
Sbjct: 2 IRVFNTLTEKKEEFKPLNDKTVKMYVCGPTVYDHAHIGHARSAIVFDVIRRWFEYRGYRV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN+TDVDDKII+R+ + G ++ +Y + Y DM L PTY+P+V++H+E+I
Sbjct: 62 IYVRNYTDVDDKIIKRSKEEGIPWYEVAKKYIESYEEDMKALNIKEPTYKPKVTEHIEEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+MI +I AY EGDV+F+VEK YG+LS ++ E AG R+ +K+NP DFA
Sbjct: 122 IEMIKGLIAKGYAYESEGDVYFSVEKFSEYGKLSKRKTEELIAGARIEPGEKKKNPLDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK +K GEP W+SPWG GRPGWHIECSAM+ YL DIHGGG+DLIFPHHENEIAQS
Sbjct: 182 LWKKSKEGEPGWESPWGIGRPGWHIECSAMAMKYLGRTMDIHGGGLDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A S V YW+HNG V N EKMSKSLGNFFTI+ I + + LR FL+S HYRSP+
Sbjct: 242 EAYTGKSFVRYWLHNGFVMVNKEKMSKSLGNFFTIKDILKEFSSDVLRLFLLSTHYRSPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++S +L A + + ++ E+ E T N D N + +F + M
Sbjct: 302 DFSFERLKDAERSFGRLLNFIESKEII-----EKLPTFEKNSEIFDVEN-YKLQFESAMD 355
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS--LIESLRKIENEVKEVLRILG 436
DD NT+ L F+ + N++K K K+ ++S E++ K V+ L++LG
Sbjct: 356 DDFNTARALGVIFE-----LVKEANLIKDKAIKENKISNKEKETILKAIGIVESYLKLLG 410
Query: 437 L 437
Sbjct: 411 F 411
>gi|312171645|emb|CBX79903.1| cysteinyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
Length = 507
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 183/394 (46%), Positives = 241/394 (61%), Gaps = 22/394 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI GK+GMYVCG+T YDL H+GH R +FD++ RYL + ++
Sbjct: 47 LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQL 106
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA++ GE+ L+ R E D A L LPP +PR + H+ +I
Sbjct: 107 NYVRNITDIDDKIIKRAHENGESIEQLTQRMIGEMHKDFAALNILPPDLEPRATRHIAEI 166
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR-KRNPAD 196
+++ ++I + AYV GDV F+V+ YG LS Q L+ +AG RV V + KRNP D
Sbjct: 167 IELVEKLIAREHAYVASNGDVMFSVDSDLQYGSLSRQDLDQLQAGARVEVTADVKRNPMD 226
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +KA EP W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIA
Sbjct: 227 FVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIA 286
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS +A V+YWMH+G V + EKMSKSL NFFT+R + E Y +R+FL+S HYRS
Sbjct: 287 QSTSAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLEHYDAETVRYFLMSGHYRS 346
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
LNY L+ A A+ +Y L++ + +P AR F A
Sbjct: 347 QLNYGEDNLNQARSALERLYIALRNTDTGATPAGGEEFEAR---------------FRAA 391
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP 410
M DD NT + F + +N +K + P
Sbjct: 392 MDDDFNTPEAYSALFD-----LAREVNRMKAENP 420
>gi|118442910|ref|YP_877177.1| cysteinyl-tRNA synthetase [Clostridium novyi NT]
gi|187629804|sp|A0PXS5.1|SYC_CLONN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|118133366|gb|ABK60410.1| cysteinyl-tRNA synthetase [Clostridium novyi NT]
Length = 466
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 173/408 (42%), Positives = 257/408 (62%), Gaps = 8/408 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K++N+MT+QKE F PI G+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 1 MKLFNTMTRQKEEFKPIKDGEVSMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I++AN+ L +R+ EY D L T PR +++M++I
Sbjct: 61 NFIQNFTDIDDKMIKKANEENITVKELGDRFIHEYYKDADGLNIKRATANPRATEYMDEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +I+ AY V GDV+F+ ++ YG+LSGQ L++ +AG R++VD RK++P DFA
Sbjct: 121 IQFVKDLIDKGYAYEVNGDVYFSTKQFKEYGKLSGQNLDDLQAGARISVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K GEPSW+ PWG GRPGWHIECS M+ L DIH GG DL+FPHHENEIAQS
Sbjct: 181 IWKSEKPGEPSWNCPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + +YWMH+ ++ NN+KMSKSL NFFT R+I E+Y +R F++SAHYR+PL
Sbjct: 241 EARNGKTFANYWMHSAYLNINNKKMSKSLNNFFTTREILEKYDAEVIRLFMLSAHYRTPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHA 375
N+S L SA + +Y + + E L K ++ ++ + L ++++
Sbjct: 301 NFSDDLLQSAKASNERLYNAIGNLERLLDEV----KVDKVTENEKEYVKNLESYKEKYIE 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+M DD NT+ ++ F D +K IN+++N K+ + L LI L K
Sbjct: 357 KMDDDFNTADAISVIF-DLVKDINTNINTESSKELVEYSLELIRELGK 403
>gi|146328731|ref|YP_001209134.1| cysteinyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
gi|166200146|sp|A5EWG6.1|SYC_DICNV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146232201|gb|ABQ13179.1| cysteinyl-tRNA synthetase class I [Dichelobacter nodosus VCS1703A]
Length = 456
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 177/387 (45%), Positives = 240/387 (62%), Gaps = 26/387 (6%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
L +YNS+++QKE F PI V MYVCG+T YD H+GHAR V FD + R+L +
Sbjct: 3 ALHLYNSLSRQKEPFHPITPNHVMMYVCGMTVYDFCHIGHARVMVVFDTIARHLRASGYQ 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
+TYVRN TD+DDKIIRRA + E +L+ R+ D A L CLPP+ +P+ ++++ +
Sbjct: 63 LTYVRNITDIDDKIIRRAAENNEPIQALTQRFINAMHEDEAALGCLPPSIEPKATEYVAE 122
Query: 138 IKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI ++I + AY+ + GDV+++V YG+L+ +RLE+ RAGER+A++ K +P D
Sbjct: 123 MIAMIGELIAQNHAYIADNGDVYYSVRSFDEYGKLANRRLEDLRAGERIAINEAKNDPLD 182
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK AK GEPSW+SPWG GRPGWHIECS MS H L FDIHGGG+DL FPHHE EIA
Sbjct: 183 FVLWKKAKTGEPSWESPWGAGRPGWHIECSVMSRHQLGDHFDIHGGGMDLKFPHHECEIA 242
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS C +V+YW+HNG + +NEKMSKSLGNFFT+R + + Y +R F++ +HYR
Sbjct: 243 QSEPVCGGKHVNYWLHNGFINIDNEKMSKSLGNFFTVRDVLKNYAGEVIRFFMLQSHYRG 302
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVA----LSPFQEHGKTARINPAAEDCINKLRDE 372
P+NYS L+ A + +Y L+ L P+QE
Sbjct: 303 PVNYSDAALEEAKRGLQRLYTALETAPTTGGAILLPYQE--------------------R 342
Query: 373 FHARMSDDLNTSHILTGAFQDALKFIN 399
F A M DD NT + F+ A K +N
Sbjct: 343 FVAAMDDDFNTPQAIAVLFELA-KMLN 368
>gi|50122074|ref|YP_051241.1| cysteinyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
gi|61216191|sp|Q6D2E4.1|SYC_ERWCT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|49612600|emb|CAG76050.1| cysteinyl-RNA synthetase [Pectobacterium atrosepticum SCRI1043]
Length = 461
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 247/421 (58%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI +VGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHADQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE L+ R E D L L P +PR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRAIENGETSDQLTTRMIAEMHADFDALNILRPDAEPRATHHIADI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ +I AYV GDV F+V+ + YG LS Q L+ RAG RV + KRNP DF
Sbjct: 122 IEMVETLITRRHAYVASNGDVMFSVDTASGYGVLSRQDLDQLRAGARVEITEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS
Sbjct: 242 SCCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + ++ + HG ++ FH M
Sbjct: 302 LNYSEDNLKQARAALERLYIALRGTDPSV---EAHGG------------DEFEARFHDAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + Q L +LRK+ +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRLKAEDV-QAANQLASTLRKLSG-------VLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|387813875|ref|YP_005429358.1| cysteinyl-tRNA synthetase [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381338888|emb|CCG94935.1| cysteinyl-tRNA synthetase [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 463
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 176/323 (54%), Positives = 221/323 (68%), Gaps = 1/323 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++TQQKE F + GKV MYVCG+T YD HLGHAR V+FD++ RYL H +V
Sbjct: 1 MRIYNTLTQQKEAFKTLEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVVTRYLRHRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKI+RRA++ GE L++R + D A L L P +PR + ++ I
Sbjct: 61 HYVRNITDIDDKILRRADENGEVYTDLTDRMIRAMHEDEAKLGVLSPNDEPRATAFIDDI 120
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I AY + GDV+FAVE P+YG+LS ++LE+ AG RV V KR+PADF
Sbjct: 121 IAMIQKLIAGGHAYAADNGDVYFAVESFPDYGKLSKKKLEDLVAGARVDVQEAKRSPADF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GE SW SPWG GRPGWHIECSAMS L FDIHGGG DL+FPHHENEIAQ
Sbjct: 181 ALWKAAKPGEVSWQSPWGEGRPGWHIECSAMSTKCLGDTFDIHGGGPDLLFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V WMH G + N EKMSKSLGNFFTIR+I E+Y +R+FL+S+HYRS
Sbjct: 241 SECATGHTFVHTWMHAGAIRVNKEKMSKSLGNFFTIREILEKYPAEVVRYFLVSSHYRSQ 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQ 340
++YS L A + +Y L+
Sbjct: 301 VDYSEDNLAEAGRTLTKLYHALR 323
>gi|409397649|ref|ZP_11248512.1| cysteinyl-tRNA ligase [Pseudomonas sp. Chol1]
gi|409117783|gb|EKM94209.1| cysteinyl-tRNA ligase [Pseudomonas sp. Chol1]
Length = 461
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 180/377 (47%), Positives = 233/377 (61%), Gaps = 17/377 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TL IY+++++ K+ F P+ KV MYVCG+T YD H+GHAR V+FD++ R+L H
Sbjct: 1 MTLSIYSTLSKSKDAFKPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVARWLRHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
E+TYVRN TD+DDKII+RAN+ GE+ L R D A L L P +PR +DH+
Sbjct: 61 ELTYVRNITDIDDKIIKRANENGESFQDLVARMIAAMHEDEARLNVLRPDIEPRATDHIA 120
Query: 137 QIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+ MI +I+ AY GDV++ V K YG+LS +++E+ + G R+ VD K +P
Sbjct: 121 GMHAMIQTLIDKGFAYAPGNGDVYYRVGKFAGYGKLSRRKIEDLKIGARIEVDEAKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AK GEPSW+SPWGPGRPGWHIECS MS L FDIHGGG DL+FPHHENEI
Sbjct: 181 DFVLWKGAKPGEPSWESPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA + WMH G V + EKMSKSLGNFFTIR++ E+YHP +R+ L+S+HYR
Sbjct: 241 AQSEAATGKLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SP+NYS L A A+ Y L+ A PA + L + F A
Sbjct: 301 SPINYSEDSLREAKGALERFYNGLKGLPEAA-------------PAGGEA---LVERFGA 344
Query: 376 RMSDDLNTSHILTGAFQ 392
M DD N+ F+
Sbjct: 345 AMDDDFNSPEACAVLFE 361
>gi|418291506|ref|ZP_12903501.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM220]
gi|372199758|gb|EHP13951.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM220]
Length = 473
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/389 (47%), Positives = 239/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+ + F+ M+DD +T + F+
Sbjct: 351 EAGDDYTRRFYVAMNDDFDTVKAVAVLFE 379
>gi|289548117|ref|YP_003473105.1| cysteinyl-tRNA synthetase [Thermocrinis albus DSM 14484]
gi|289181734|gb|ADC88978.1| cysteinyl-tRNA synthetase [Thermocrinis albus DSM 14484]
Length = 490
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 179/417 (42%), Positives = 257/417 (61%), Gaps = 13/417 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L++YN++T + E F P+ +V +Y CGVT YD SH+GH R+ + FD+L RYLE+L
Sbjct: 1 MSLRLYNTLTGRVEEFVPLNPPQVLIYTCGVTVYDDSHVGHGRSLIVFDVLRRYLEYLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V +VRNFTDVDDKII +A + + ++++NRY Y DM + P +PRV++H++
Sbjct: 61 RVKFVRNFTDVDDKIINKAREECTHFMTVANRYIASYYRDMEAIGVRPADVEPRVTEHIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I +I +I+ AYV GDV+F+V+ P YG+LS + E AG RV +KR+P D
Sbjct: 121 EIIQLIQGLIDKGYAYVSGGDVYFSVKAFPEYGKLSRRNPEELEAGARVEPSEKKRDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAKAGEP+WDSPWGPGRPGWH EC AM +L + DIHGGG+DL+FPHHENEIA
Sbjct: 181 FALWKAAKAGEPAWDSPWGPGRPGWHTECVAMIFKHLGTTIDIHGGGLDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ A YW+HNG VT +KMSKSLGN+ T+R++ RYHP LR ++ HYRS
Sbjct: 241 QAEALTGRPFARYWVHNGLVTVGGQKMSKSLGNYVTLREVYSRYHPDVLRLLVLMTHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAEDCINKLRDEFHA 375
PL++S +++ + + + D E+ P +E R D I ++F A
Sbjct: 301 PLDFSWDKMEETKRSYERLKNAITDAELLKELPSEE----VREKHPLLDKIRDAEEKFFA 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL--------SLIESLRKI 424
++DD NT L F + +L++++ K +L +L++ LR I
Sbjct: 357 DLADDFNTPSALGRLFTLVSEMGKLKKEVLERRRVKTSELDAYQQASETLLKHLRGI 413
>gi|385325019|ref|YP_005879458.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase; CysRS) [Neisseria
meningitidis 8013]
gi|261393406|emb|CAX51042.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase; CysRS) [Neisseria
meningitidis 8013]
Length = 473
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/389 (47%), Positives = 239/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+ + F+ M+DD +T + F+
Sbjct: 351 EAGDDYTRRFYVAMNDDFDTVKAVAVLFE 379
>gi|332982044|ref|YP_004463485.1| cysteinyl-tRNA synthetase [Mahella australiensis 50-1 BON]
gi|332699722|gb|AEE96663.1| cysteinyl-tRNA synthetase [Mahella australiensis 50-1 BON]
Length = 467
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 173/384 (45%), Positives = 240/384 (62%), Gaps = 8/384 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++T+++E+F P+ V MYVCG T YD H+G+AR V FD L RYLE+ +V
Sbjct: 2 VRLYNTLTRKQEIFEPLNDNTVTMYVCGPTVYDYFHIGNARPLVVFDTLRRYLEYRGYKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTD+DDK+I+RAN G L +R+ QEY VD L P PR ++H+ +
Sbjct: 62 KYVQNFTDIDDKMIKRANQEGITVKELGDRFIQEYFVDAKGLNIRPADVHPRATEHITDM 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I ++I+ AYVV+G+V+F K P YG+LS Q AG RV V+ KRNP DF
Sbjct: 122 IEFIKKLIDKGVAYVVDGNVYFDTSKFPQYGKLSHQDFNEIEAGARVEVNESKRNPMDFV 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+WDSPWG GRPGWH+ECS MS YL DIHGGG DLIFPHHENEIAQS
Sbjct: 182 LWKAQKPGEPAWDSPWGMGRPGWHMECSVMSMKYLGDTIDIHGGGQDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+ +W+HNG++ + +KMSKSLGNFFT+R I++ Y +R F++ +HYRSP+
Sbjct: 242 ESLTGKPLARFWLHNGYINVDGQKMSKSLGNFFTVRDISKEYDLETVRIFMLLSHYRSPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHA 375
N+S L+ A +A+ +Y + + L + + ++ IN + R +F
Sbjct: 302 NFSHQLLEQAKNALARLY----NVKFRLEDIKNSSDISAVSEQERAFINDMPRYRQKFIE 357
Query: 376 RMSDDLNTSHILTGAFQDALKFIN 399
M DD+NT+ + G D K +N
Sbjct: 358 AMDDDMNTASAM-GVIFDLAKDVN 380
>gi|83748223|ref|ZP_00945249.1| Cysteinyl-tRNA synthetase [Ralstonia solanacearum UW551]
gi|207743491|ref|YP_002259883.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum IPO1609]
gi|83725064|gb|EAP72216.1| Cysteinyl-tRNA synthetase [Ralstonia solanacearum UW551]
gi|206594889|emb|CAQ61816.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum IPO1609]
Length = 465
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 181/379 (47%), Positives = 241/379 (63%), Gaps = 17/379 (4%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+LKIYN++ ++K+ F PI G+V MYVCG+T YD H+GHAR V FD++ R+L +
Sbjct: 3 SLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASAYD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKII+RA + GE +L++R+ D L P ++PR ++++ Q
Sbjct: 63 VTYVRNITDIDDKIIKRAVENGETIGALTDRFIAAMHEDADALGVQRPDHEPRATEYVPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI ++ N AY +GDV +AV K P YG+LSG+ LE+ RAGERVA + K++P D
Sbjct: 123 MLSMIGKLQANGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDAKQDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK+AKA EP+ W SPWG GRPGWHIECSAMS L + FD+HGGG DL FPHHEN
Sbjct: 183 FVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQ+ A ++ V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y P +R F++ +H
Sbjct: 243 EIAQAEGANGNTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRFFILRSH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRS LNYS LD A A+ +Y L+D A+ A D F
Sbjct: 303 YRSDLNYSDAHLDDARHALTRLYTALKDVPAAVG-------------AKPDWSESHGQRF 349
Query: 374 HARMSDDLNTSHILTGAFQ 392
M+DD NT + F+
Sbjct: 350 REAMNDDFNTPVAMAVLFE 368
>gi|384542068|ref|YP_005726129.1| cysteinyl-tRNA synthetase [Shigella flexneri 2002017]
gi|417721414|ref|ZP_12370260.1| cysteinyl-tRNA synthetase [Shigella flexneri K-304]
gi|417726860|ref|ZP_12375604.1| cysteinyl-tRNA synthetase [Shigella flexneri K-671]
gi|420340090|ref|ZP_14841617.1| cysteinyl-tRNA synthetase [Shigella flexneri K-404]
gi|281599852|gb|ADA72836.1| Cysteinyl-tRNA synthetase [Shigella flexneri 2002017]
gi|332763819|gb|EGJ94057.1| cysteinyl-tRNA synthetase [Shigella flexneri K-671]
gi|333021864|gb|EGK41112.1| cysteinyl-tRNA synthetase [Shigella flexneri K-304]
gi|391273930|gb|EIQ32748.1| cysteinyl-tRNA synthetase [Shigella flexneri K-404]
Length = 461
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 178/350 (50%), Positives = 227/350 (64%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + DV F V P YG LS Q L+ +AG RV V KRN DF
Sbjct: 122 IELTEQLIAKGHAYVADNSDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNRMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + ++P AR A +D N
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFN 351
>gi|422009692|ref|ZP_16356675.1| cysteinyl-tRNA ligase [Providencia rettgeri Dmel1]
gi|414093510|gb|EKT55182.1| cysteinyl-tRNA ligase [Providencia rettgeri Dmel1]
Length = 462
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 192/425 (45%), Positives = 254/425 (59%), Gaps = 37/425 (8%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD + RYL +L ++
Sbjct: 2 LQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E+ L+ R E D L L P +PR + H+ +I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVEELTTRMLAEMHKDFDALNILRPDSEPRATRHIGEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV GDV F V+ PNYG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELTQSLIERGHAYVAANGDVMFEVKTDPNYGLLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + E Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR- 376
LNY+ L A A+ +Y L+ + + P DEF AR
Sbjct: 302 LNYTEENLKQARTALERMYTALRGTDKSAVPAG-------------------GDEFKARF 342
Query: 377 ---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT + F D ++ +N + K + +S ++ +++E+
Sbjct: 343 IEAMNDDFNTPEAYSVLF-DMVREVN---------RLKSEDMSAANAMAA---QLRELAG 389
Query: 434 ILGLL 438
+LGLL
Sbjct: 390 VLGLL 394
>gi|37527666|ref|NP_931010.1| cysteinyl-tRNA synthetase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|61216271|sp|Q7N0S5.1|SYC_PHOLL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|36787101|emb|CAE16176.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase) (CysRS)
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 461
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/432 (44%), Positives = 261/432 (60%), Gaps = 25/432 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIFNTLSRQKEEFKPIHPGKVGMYVCGITIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E+ L+ R E D L L P +PR + H+++I
Sbjct: 62 TYVRNVTDVDDKIIKRAAENSESCDDLTGRMLAEMYKDFDALNILRPDLEPRATRHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ +I AYV + GDV F+VE +YG LS Q L +AG RV V KRNP DF
Sbjct: 122 IALTESLIKRGHAYVADNGDVMFSVESDQDYGLLSRQDLSQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGAGRPGWHIECSAMNSKQLGNHFDIHGGGADLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK--------- 368
LNY+ L A A+ Y L+ + ++ P AR A D N
Sbjct: 302 LNYTEDNLKQARTALERFYTALRGTDASVPPAGGEIFEARFIDAMNDDFNTPEAYSVLFD 361
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ----------QQLSLI 418
+ E + S+D++ ++ L L+ + L +L ++QP+Q ++++ I
Sbjct: 362 MVREINRLKSEDMDAANGLAA----ELRKLAGILGLL-QQQPEQFLHRGIQADDEEIAKI 416
Query: 419 ESLRKIENEVKE 430
E+L K N+ ++
Sbjct: 417 EALIKQRNDARK 428
>gi|304388715|ref|ZP_07370773.1| cysteine--tRNA ligase [Neisseria meningitidis ATCC 13091]
gi|304337279|gb|EFM03455.1| cysteine--tRNA ligase [Neisseria meningitidis ATCC 13091]
Length = 699
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/389 (47%), Positives = 238/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYLLTY 289
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 469
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 470 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 530 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 576
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+ + F+ M+DD +T + F+
Sbjct: 577 EADDDYTRRFYVAMNDDFDTVKAVAVLFE 605
>gi|422875372|ref|ZP_16921857.1| cysteinyl-tRNA synthetase [Clostridium perfringens F262]
gi|380303641|gb|EIA15940.1| cysteinyl-tRNA synthetase [Clostridium perfringens F262]
Length = 466
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 173/408 (42%), Positives = 252/408 (61%), Gaps = 12/408 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++ ++KE F P+ G+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 2 IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGFKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I++AN+ G + + Y +EY D L T PR ++ + +I
Sbjct: 62 DFVQNFTDIDDKMIKKANEEGTTVKKIGDTYIKEYYQDADALNIERATVNPRATEFIGEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +++ AY V+GDV+F+ +K YG+LSGQ +E+ ++G R++VD RK++P DFA
Sbjct: 122 IKFVKGLVDKGYAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARISVDERKKDPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS
Sbjct: 182 IWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YW+H+ V NNEKMSKSL NFFT R+I ERY +R ++SAHYR L
Sbjct: 242 EALTGEPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVIRFLMLSAHYRQQL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDC-----EVALSPFQEHGKTARINPAAEDCINKLRDEF 373
N+S L+SA +V IY + + EV+ E K + +NK ++++
Sbjct: 302 NFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEKVYL------ESLNKYKEKY 355
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
+M DD NT+ +T F D +K N+++ + K+ Q+ L LI L
Sbjct: 356 IEKMDDDFNTADAITAIF-DLIKDTNTNITIDSSKELAQKALELIREL 402
>gi|160933144|ref|ZP_02080533.1| hypothetical protein CLOLEP_01987 [Clostridium leptum DSM 753]
gi|156868218|gb|EDO61590.1| cysteine--tRNA ligase [Clostridium leptum DSM 753]
Length = 470
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 187/413 (45%), Positives = 259/413 (62%), Gaps = 14/413 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KI+N++T+QKE F PI G+ +Y CG T Y+ H+G+AR FD+L RYLE+ +V
Sbjct: 1 MKIFNTLTRQKEEFVPIAPGEAKIYACGPTVYNFIHIGNARPMCVFDILRRYLEYRGMKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTD+DDKIIR+AN+ + L+++ RY QEY D L T PR ++ MEQI
Sbjct: 61 TFVQNFTDIDDKIIRKANEEKTDYLTVAERYIQEYKTDARGLNIREATVHPRATETMEQI 120
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++I+ ++ AY E GDV+F K YG+LS Q LE AG R+ V K +P DF
Sbjct: 121 IEIISDLVKKGYAYPAENGDVYFRTLKFSGYGKLSHQPLEELEAGARIGVGESKEDPMDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEP WDSPWG GRPGWHIECSAM+ YL DIH GG DLIFPHHENEIAQ
Sbjct: 181 ALWKAAKPGEPYWDSPWGKGRPGWHIECSAMARTYLGDTIDIHCGGQDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S YWMHNG++ +N KMSKSL NFFT+R++ + + +R+ ++++HYRSP
Sbjct: 241 SECCNGVPFAHYWMHNGYINVDNRKMSKSLNNFFTVREVAKEFGYEPIRYLMVASHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR- 376
+NYSV L + A+ +Y ++ E +S + G+ AR ++ I K +E+ R
Sbjct: 301 INYSVDLLKQCTAALERLYTCRENLEFVVSNAKP-GREAR-----DEEIKKRLEEYQNRF 354
Query: 377 ---MSDDLNTSHILTGAFQDALKFINSSLNMLKK--KQPKQQQLSLIESLRKI 424
M DDLNT+ + F+ A K IN++L+ K+ ++ L+L SL +
Sbjct: 355 CEAMDDDLNTADAIAVLFELA-KDINTNLSTATNPHKEIAEEALTLFNSLADV 406
>gi|90407713|ref|ZP_01215892.1| cysteinyl-tRNA synthetase [Psychromonas sp. CNPT3]
gi|90311182|gb|EAS39288.1| cysteinyl-tRNA synthetase [Psychromonas sp. CNPT3]
Length = 460
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 197/425 (46%), Positives = 256/425 (60%), Gaps = 28/425 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE FTP+V GKV MYVCGVT YD H+GH R V+FD + RYL ++
Sbjct: 2 LKIYNTLSKQKEEFTPLVAGKVSMYVCGVTIYDNCHIGHGRTFVAFDSVVRYLRFKGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
++RN TDVDDKII+RAN+ E+ +L+ R+ + D L L P +PRV++HM +
Sbjct: 62 NFIRNITDVDDKIIKRANENNESCDALTARFTKAMHRDFDALNILRPDLEPRVTEHMPDV 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I AYV GDV F+V YG+LSGQ L+ +AG RV V+ K +P DF
Sbjct: 122 IAMIKTLIEKQHAYVASNGDVLFSVSSFDGYGKLSGQNLDMLQAGARVDVEESKHDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW+SPWG GRPGWHIECSAMS +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWESPWGAGRPGWHIECSAMSFKHLGPIFDIHGGGSDLTFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + + WMH+G V + KMSKSL NFFTI+ + E Y ++R+FLIS HYRS
Sbjct: 242 SCCAHDATYANTWMHSGMVQVDKVKMSKSLNNFFTIKDVLEAYDAESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+D +++ +P A+D N F M
Sbjct: 302 LNYSEDNLKQARASLERLYTALRDVDISDAPI------------AKD--NSHYQAFCKAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ A K +N + K P +L+L+ LR + N +LGL
Sbjct: 348 DDDFNTPEALAVLFELA-KALNKAKLSADKSAP---ELALL--LRTLGN-------VLGL 394
Query: 438 LPPGA 442
L A
Sbjct: 395 LDQSA 399
>gi|433522782|ref|ZP_20479461.1| cysteine--tRNA ligase [Neisseria meningitidis 61103]
gi|432257297|gb|ELL12600.1| cysteine--tRNA ligase [Neisseria meningitidis 61103]
Length = 473
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/389 (47%), Positives = 238/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+ + F+ M+DD +T + F+
Sbjct: 351 EAGDDYTRRFYVAMNDDFDTVKAVAVLFE 379
>gi|421896923|ref|ZP_16327318.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum MolK2]
gi|206588088|emb|CAQ18668.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum MolK2]
Length = 465
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 181/379 (47%), Positives = 240/379 (63%), Gaps = 17/379 (4%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+LKIYN++ ++K+ F PI G+V MYVCG+T YD H+GHAR V FD++ R+L +
Sbjct: 3 SLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASAYD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKII+RA + GE +L++R+ D L P ++PR ++++ Q
Sbjct: 63 VTYVRNITDIDDKIIKRAVENGETIGALTDRFIAAMHEDADALGVQRPDHEPRATEYVPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI ++ N AY +GDV +AV K P YG+LSG+ LE+ RAGERVA + K++P D
Sbjct: 123 MLSMIGKLQANGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDAKQDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK+AKA EP+ W SPWG GRPGWHIECSAMS L + FD+HGGG DL FPHHEN
Sbjct: 183 FVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQ+ A + V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y P +R F++ +H
Sbjct: 243 EIAQAEGANGSTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRFFILRSH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRS LNYS LD A A+ +Y L+D A+ A D F
Sbjct: 303 YRSDLNYSDAHLDDARHALTRLYTALKDVPAAVG-------------AKPDWSESHGQRF 349
Query: 374 HARMSDDLNTSHILTGAFQ 392
M+DD NT + F+
Sbjct: 350 REAMNDDFNTPVAMAVLFE 368
>gi|238760398|ref|ZP_04621538.1| Cysteinyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
gi|238701403|gb|EEP93980.1| Cysteinyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
Length = 461
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 191/421 (45%), Positives = 249/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +P + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLQRPDLEPHATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I + AYV + GDV F+VE P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTERLIARNHAYVADNGDVMFSVESDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ G A PA + F A M
Sbjct: 302 LNYSEENLKQARASLERLYTALR------------GTDANATPAGG---AEFEARFRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + + + + E++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKTED--------MTAANALAAELRKLAHVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|171463666|ref|YP_001797779.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|229470557|sp|B1XUY8.1|SYC_POLNS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|171193204|gb|ACB44165.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 473
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 187/410 (45%), Positives = 251/410 (61%), Gaps = 26/410 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++++ K++F PIV GKV MYVCG+T YD H+GHAR + FD++ R+L EV
Sbjct: 2 LQIYNTLSRSKQVFKPIVPGKVKMYVCGMTVYDFCHIGHARVMIVFDMVVRWLRASGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII RA + GE +L+NR+ D +L + P +PR +D++ Q+
Sbjct: 62 LYVRNITDIDDKIINRAIENGEPISALTNRFVDAMHADSDELGLMHPDQEPRATDYIAQM 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ MI ++I N+ AY +GDV FAV P YG+LSG+ L+ AGERVAV KR+P DF
Sbjct: 122 QGMIGKLIENELAYQANDGDVNFAVRLLPRYGQLSGKTLDELNAGERVAVGDGKRDPLDF 181
Query: 198 ALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWK+AK EP+ W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENE
Sbjct: 182 VLWKSAKPEEPADTRWKSPWGEGRPGWHIECSAMSCDLLGEHFDIHGGGADLQFPHHENE 241
Query: 255 IAQSCAACQDSN--------VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 306
IAQS A + V+YWMHNGH+ N EKMSKSLGNFF IR + + + P +R
Sbjct: 242 IAQSEGALYGKDRKVDDAPFVNYWMHNGHIRVNEEKMSKSLGNFFLIRDVLKSFDPEVIR 301
Query: 307 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI 366
F++ HYRSP+NYS QL+ A + +Y L A + NP A+
Sbjct: 302 FFMLKTHYRSPINYSDAQLEEARSGLVRLYTALAQGSKAQTI-----SLGSSNPWAKRFA 356
Query: 367 NKLRDEFH-----ARMSDDLNTSHILTG----AFQDALKFINSSLNMLKK 407
+ + D+F+ A + D ++ + G + LK + +SLN L++
Sbjct: 357 DAMNDDFNTPEAIAVLFDIVSEVNRAQGEEKQVLANILKALGASLNFLQR 406
>gi|209527155|ref|ZP_03275668.1| cysteinyl-tRNA synthetase [Arthrospira maxima CS-328]
gi|376001627|ref|ZP_09779490.1| cysteinyl-tRNA synthetase [Arthrospira sp. PCC 8005]
gi|209492404|gb|EDZ92746.1| cysteinyl-tRNA synthetase [Arthrospira maxima CS-328]
gi|375330014|emb|CCE15243.1| cysteinyl-tRNA synthetase [Arthrospira sp. PCC 8005]
Length = 486
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 187/397 (47%), Positives = 247/397 (62%), Gaps = 13/397 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LKIYN+ T+QKE FT + GKV MY CGVT YD HLGHAR+ ++D++ RYLE
Sbjct: 1 MVLKIYNTQTRQKETFTTLEPGKVKMYCCGVTVYDYCHLGHARSYTTWDVVRRYLEWSGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV+NFTD+DDKI+ RA + ++S R+ Y D+ L PRV+DH++
Sbjct: 61 EVNYVQNFTDIDDKILNRAKEQESTMEAVSQRFIDAYFEDLRRLNVRDAKAYPRVTDHIK 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE--RVAVDS----R 190
+I +I Q+ AY V+GDV++ V P+YG+LS ++LE+ + G RVAV +
Sbjct: 121 EIHQLIEQLTATGHAYAVDGDVYYNVGHFPDYGKLSRRQLEDLQMGASGRVAVADPETLK 180
Query: 191 KRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPH 250
K+NPADFALWKAAK GEP+WDSPWGPGRPGWHIECSAM L DIHGGG DL+FPH
Sbjct: 181 KKNPADFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGGGGDLVFPH 240
Query: 251 HENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER-YHPLALRHFL 309
HENEIAQS AA + YWMHNG VT EKMSKSLGNF TIR++ +R P+ +R F+
Sbjct: 241 HENEIAQSEAATGKTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLDRPVDPMVVRLFI 300
Query: 310 ISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH-GKTARINPAAEDCINK 368
+ HYR PL+++ + SA + ++TL+D + + G +A +P+ D
Sbjct: 301 LQGHYRKPLDFTDEAIASAKNG----WETLKDGLLFAEQYGARLGWSADSSPSKYDTTED 356
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNML 405
F M DD NT L F+ A K + N+L
Sbjct: 357 ALQRFRVAMDDDFNTPGGLAVLFELA-KELRRQGNLL 392
>gi|401762604|ref|YP_006577611.1| cysteinyl-tRNA ligase [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400174138|gb|AFP68987.1| cysteinyl-tRNA ligase [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 461
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 198/425 (46%), Positives = 253/425 (59%), Gaps = 37/425 (8%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L +
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIVEMHKDFDALNIQRPDSEPRATHHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F+V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEKLIARGHAYVADNGDVMFSVPTDPTYGALSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR- 376
LNYS L A A+ +Y L+ + ++ PAA D F AR
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSV-------------PAAGG------DAFEARF 342
Query: 377 ---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT + F A +N LK + +L LRK+ +
Sbjct: 343 VEVMNDDFNTPEAYSVLFDMA-----REVNRLKSEDMAAAN-ALASHLRKLSS------- 389
Query: 434 ILGLL 438
+LGLL
Sbjct: 390 VLGLL 394
>gi|442320001|ref|YP_007360022.1| cysteinyl-tRNA synthetase [Myxococcus stipitatus DSM 14675]
gi|441487643|gb|AGC44338.1| cysteinyl-tRNA synthetase [Myxococcus stipitatus DSM 14675]
Length = 492
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/420 (43%), Positives = 254/420 (60%), Gaps = 11/420 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++++N+M+ QKEL P V G VG+YVCG T Y H+G+AR SFD++ RYL + V
Sbjct: 9 IRLFNTMSMQKELLEPAVPGCVGVYVCGPTVYSYIHIGNARTFTSFDVVVRYLRYRGYTV 68
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTDVDDKII+ A++ GE P++L++RY + + D L + P P+VS+H+ +I
Sbjct: 69 RYVRNFTDVDDKIIKAAHETGEAPVALASRYVEYFREDAKALHMVEPDVAPKVSEHLPEI 128
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I +++ AY +GDV+F+V +Y +LS + L++ GERV +KR P DFA
Sbjct: 129 VRIIQTLVDKGFAYESQGDVYFSVRADKDYAKLSKRNLDDLSVGERVQPGDQKREPLDFA 188
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEPSW+SPWG GRPGWHIECSAMS YL FDIHGG +DLIFPHHENEIAQS
Sbjct: 189 LWKAAKPGEPSWESPWGLGRPGWHIECSAMSEKYLGETFDIHGGALDLIFPHHENEIAQS 248
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+A YWMH G + KMSKSLGN +R E+ ALR F +S HYR PL
Sbjct: 249 ESAHGKDLAKYWMHCGFLDLEGAKMSKSLGNVVRLRDALEKVDAEALRFFFLSTHYRHPL 308
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++S L A + Y Y+TL+ + L+ GK P + ++ EF M
Sbjct: 309 SFSDKALADAEARMEYFYETLRKVDERLA-----GKDFGAGPVHGEP-HRFLGEFECAMD 362
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD N++ L AL + +N L K P + + + +L + ++V++V +LGL
Sbjct: 363 DDFNSAGALG-----ALSGLFGMMNELTDKPPVKDKPLVGRTLLALRDDVRKVSGVLGLF 417
>gi|433497645|ref|ZP_20454670.1| cysteine--tRNA ligase [Neisseria meningitidis M7089]
gi|433499690|ref|ZP_20456691.1| cysteine--tRNA ligase [Neisseria meningitidis M7124]
gi|433501759|ref|ZP_20458738.1| cysteine--tRNA ligase [Neisseria meningitidis NM174]
gi|432231584|gb|ELK87243.1| cysteine--tRNA ligase [Neisseria meningitidis M7089]
gi|432232373|gb|ELK88018.1| cysteine--tRNA ligase [Neisseria meningitidis M7124]
gi|432232760|gb|ELK88396.1| cysteine--tRNA ligase [Neisseria meningitidis NM174]
Length = 473
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/389 (47%), Positives = 239/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+ + F+ M+DD +T + F+
Sbjct: 351 EAGDDYTRRFYVAMNDDFDTVKAVAVLFE 379
>gi|410862130|ref|YP_006977364.1| cysteinyl-tRNA ligase [Alteromonas macleodii AltDE1]
gi|410819392|gb|AFV86009.1| cysteinyl-tRNA ligase [Alteromonas macleodii AltDE1]
Length = 460
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 189/421 (44%), Positives = 251/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN+ T++K F P+ GKVG+YVCG+T YDLSH+GHAR +SFD+L RYL HL +V
Sbjct: 2 LHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYLRHLGLDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII RAN+ GE+ +L+ R D A + L P +P VS HM++I
Sbjct: 62 KYVRNITDIDDKIIARANENGESFEALTARTIAMMHEDFAAINLLEPDVEPTVSGHMDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++I ++++ AY + GDV F V K +YG+LS Q L+ +AG RV V + K +P DF
Sbjct: 122 IEIIKRLMDKGYAYQAKSGDVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAAGKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK K GEP+W SPWG GRPGWHIECSAM+ +L + FDIHGGG DL FPHHENE+AQ
Sbjct: 182 VLWKTTKPGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH G V N+EKMSKSLGNFFT+R + + + LR FL+SAHYRS
Sbjct: 242 SCCAYDTPYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVLKEHDSETLRFFLMSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS + A A+ +Y L+ V N + + F A M
Sbjct: 302 LSYSQDNITQAKAALERLYTALRGVVV--------------NESTDLSYGGYLARFEAAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DDLN + F + LN K + +L+ + +K + ILG+
Sbjct: 348 NDDLNVPEAFSVLFD-----VARELNRQKDNAEEAGKLAAV---------LKGLGAILGM 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|421541345|ref|ZP_15987471.1| cysteine--tRNA ligase [Neisseria meningitidis 93004]
gi|402314868|gb|EJU50436.1| cysteine--tRNA ligase [Neisseria meningitidis 93004]
Length = 473
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/389 (47%), Positives = 239/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ T +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKN-------------TPPADPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+ + F+ M+DD +T + F+
Sbjct: 351 EADDDYTRRFYVAMNDDFDTVKAVAVLFE 379
>gi|307544947|ref|YP_003897426.1| cysteinyl-tRNA synthetase [Halomonas elongata DSM 2581]
gi|307216971|emb|CBV42241.1| cysteinyl-tRNA synthetase [Halomonas elongata DSM 2581]
Length = 467
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 190/421 (45%), Positives = 255/421 (60%), Gaps = 26/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T++KE FTPI G+V MYVCG+T YD HLGHAR V+FD++ RYL +V
Sbjct: 1 MQIYNTLTRRKETFTPIDPGRVRMYVCGMTVYDYCHLGHARVMVAFDVITRYLRARGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKI++RA + GE SL++R D L L P +PR + H+++I
Sbjct: 61 TYVRNITDIDDKILKRAEENGETIASLTDRMIDAMHEDEGRLGVLRPDAEPRATQHVDEI 120
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I+ AY GDV++ V K +YG+L+ + ++ RAG RV V+ K +P DF
Sbjct: 121 VTMIQTLIDKGYAYAASNGDVYYRVRKFADYGKLNNRDPDDMRAGARVDVEELKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GE W SPWGPGRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 181 VLWKAAKPGEADWLSPWGPGRPGWHIECSAMSTCCLGETFDIHGGGPDLTFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+ WMH G V +EKMSKSLGNFFTIR++ E + P +R+ L+++HYRSP
Sbjct: 241 SEAATGKQYVNTWMHAGAVRVQHEKMSKSLGNFFTIREVLEHHDPEVVRYLLVASHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NY+ L A ++ Y L VAL + G+ ++P+ F M
Sbjct: 301 INYAPDSLADARKSLERFYNALDG--VALEGVETPGE---VDPS-------FDRRFIEAM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ ++ F + LN +K+ P+Q + E+K + +LGL
Sbjct: 349 DDDFNTAGAISVLFD-----LARELNRARKEAPEQAP--------ALAAELKRLGGVLGL 395
Query: 438 L 438
L
Sbjct: 396 L 396
>gi|187776555|ref|ZP_02993028.1| hypothetical protein CLOSPO_00067 [Clostridium sporogenes ATCC
15579]
gi|187775214|gb|EDU39016.1| cysteine--tRNA ligase [Clostridium sporogenes ATCC 15579]
Length = 465
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 171/404 (42%), Positives = 257/404 (63%), Gaps = 4/404 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T +KE F +V G+V MYVCG T Y+ H+G+AR V FD + RYLE+ +V
Sbjct: 1 MKVYNTLTNKKEEFVTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDSIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I++AN+ G L +R+ +EY D DL T PR ++ M++I
Sbjct: 61 KFIQNFTDIDDKMIKKANEEGITVKELGDRFIKEYYKDADDLNIERATKNPRATEFMDEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ +I AY ++GDV+F+ ++ +YG+LSGQ LE + G R+ VD RK++P DFA
Sbjct: 121 IRFVSDLIEKGYAYEIDGDVYFSTKRFGDYGKLSGQNLEELQLGSRINVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K GEP+W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS
Sbjct: 181 IWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +
Sbjct: 241 EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARM 377
N+S+ LDS A+ +Y ++ + E L + E + + E + K ++++ +M
Sbjct: 301 NFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
DD NT+ ++ F D ++ +N+++ + K+ + L LI L
Sbjct: 359 DDDFNTADAISVIF-DLIRDVNTNVTIESSKELVKYTLDLIREL 401
>gi|423062587|ref|ZP_17051377.1| cysteinyl-tRNA synthetase [Arthrospira platensis C1]
gi|406715922|gb|EKD11074.1| cysteinyl-tRNA synthetase [Arthrospira platensis C1]
Length = 486
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 187/397 (47%), Positives = 247/397 (62%), Gaps = 13/397 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LKIYN+ T+QKE FT + GKV MY CGVT YD HLGHAR+ ++D++ RYLE
Sbjct: 1 MVLKIYNTQTRQKETFTTLEPGKVKMYCCGVTVYDYCHLGHARSYTTWDVVRRYLEWSGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV+NFTD+DDKI+ RA + ++S R+ Y D+ L PRV+DH++
Sbjct: 61 EVNYVQNFTDIDDKILNRAKEQESTMEAVSQRFIDAYFEDLRRLNVRDAKAYPRVTDHIK 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE--RVAVDS----R 190
+I +I Q+ AY V+GDV++ V P+YG+LS ++LE+ + G RVAV +
Sbjct: 121 EIHQLIDQLTATGHAYAVDGDVYYNVGHFPDYGKLSRRQLEDLQMGASGRVAVADPETLK 180
Query: 191 KRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPH 250
K+NPADFALWKAAK GEP+WDSPWGPGRPGWHIECSAM L DIHGGG DL+FPH
Sbjct: 181 KKNPADFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGGGGDLVFPH 240
Query: 251 HENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER-YHPLALRHFL 309
HENEIAQS AA + YWMHNG VT EKMSKSLGNF TIR++ +R P+ +R F+
Sbjct: 241 HENEIAQSEAATGKTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLDRPVDPMVVRLFI 300
Query: 310 ISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH-GKTARINPAAEDCINK 368
+ HYR PL+++ + SA + ++TL+D + + G +A +P+ D
Sbjct: 301 LQGHYRKPLDFTDEAIASAKNG----WETLKDGLLFAEQYGARLGWSADSSPSKYDTTED 356
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNML 405
F M DD NT L F+ A K + N+L
Sbjct: 357 ALQRFRVAMDDDFNTPGGLAVLFELA-KELRRQGNLL 392
>gi|336123884|ref|YP_004565932.1| cysteinyl-tRNA synthetase [Vibrio anguillarum 775]
gi|335341607|gb|AEH32890.1| Cysteinyl-tRNA synthetase [Vibrio anguillarum 775]
Length = 460
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 258/421 (61%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PI KVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSITRQKEEFKPIHANKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R + D L P +PR + ++++I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIADMHADFDALNMKRPDVEPRATAYIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV GDV F V K YG+LS Q L+ +AG R+ VD KR+P DF
Sbjct: 122 IGLVQRLIERGFAYVASNGDVMFEVNKFDEYGKLSKQDLDQLQAGARIDVDLAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWG GRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGEGRPGWHIECSAMNSAILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ ++ ++ E+ +++ F M
Sbjct: 302 LNYSEDNLKQARASLERLYTALRGLDLTVAV-----------AGGEEYVSR----FSIAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F D + IN K K QQ S + +L ++E+ ++G+
Sbjct: 347 NDDFNTPEAYSVLF-DMARDIN------KLKTENLQQASALGAL------MRELADVIGI 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|433476514|ref|ZP_20433845.1| cysteine--tRNA ligase [Neisseria meningitidis 88050]
gi|433516605|ref|ZP_20473363.1| cysteine--tRNA ligase [Neisseria meningitidis 2004090]
gi|433518715|ref|ZP_20475449.1| cysteine--tRNA ligase [Neisseria meningitidis 96023]
gi|433524927|ref|ZP_20481579.1| cysteine--tRNA ligase [Neisseria meningitidis 97020]
gi|433529189|ref|ZP_20485794.1| cysteine--tRNA ligase [Neisseria meningitidis NM3652]
gi|433531364|ref|ZP_20487941.1| cysteine--tRNA ligase [Neisseria meningitidis NM3642]
gi|433533398|ref|ZP_20489954.1| cysteine--tRNA ligase [Neisseria meningitidis 2007056]
gi|433535558|ref|ZP_20492083.1| cysteine--tRNA ligase [Neisseria meningitidis 2001212]
gi|432207372|gb|ELK63362.1| cysteine--tRNA ligase [Neisseria meningitidis 88050]
gi|432250791|gb|ELL06171.1| cysteine--tRNA ligase [Neisseria meningitidis 2004090]
gi|432250876|gb|ELL06253.1| cysteine--tRNA ligase [Neisseria meningitidis 96023]
gi|432257429|gb|ELL12729.1| cysteine--tRNA ligase [Neisseria meningitidis 97020]
gi|432263543|gb|ELL18760.1| cysteine--tRNA ligase [Neisseria meningitidis NM3652]
gi|432263814|gb|ELL19025.1| cysteine--tRNA ligase [Neisseria meningitidis NM3642]
gi|432264712|gb|ELL19911.1| cysteine--tRNA ligase [Neisseria meningitidis 2007056]
gi|432269148|gb|ELL24311.1| cysteine--tRNA ligase [Neisseria meningitidis 2001212]
Length = 473
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 184/389 (47%), Positives = 238/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+ + F+ M+DD +T + F+
Sbjct: 351 EAGDDYTRRFYVAMNDDFDTVKAVAVLFE 379
>gi|169344133|ref|ZP_02865116.1| cysteinyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
gi|169297744|gb|EDS79843.1| cysteinyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
Length = 466
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 173/408 (42%), Positives = 253/408 (62%), Gaps = 12/408 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++ ++KE F P+ G+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 2 IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGFKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I++AN+ G + + Y +EY D L T PR ++ + +I
Sbjct: 62 DFVQNFTDIDDKMIKKANEEGTTVKKIGDTYIKEYYQDADALNIERATVNPRATEFIGEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +++ AY V+GDV+F+ +K YG+LSGQ +E+ ++G R++VD RK++P DFA
Sbjct: 122 IKFVKGLVDKGYAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARISVDERKKDPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS
Sbjct: 182 IWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YW+H+ V NNEKMSKSL NFFT R+I ERY +R ++SAHYR L
Sbjct: 242 EALTGEPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVIRFLMLSAHYRQQL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDC-----EVALSPFQEHGKTARINPAAEDCINKLRDEF 373
N+S L+SA +V IY + + EV+ E K A + +N+ ++++
Sbjct: 302 NFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEK------AYLESLNQYKEKY 355
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
+M DD NT+ +T F D +K N+++ + K+ Q+ L LI L
Sbjct: 356 IEKMDDDFNTADAITAIF-DLIKDTNTNITIDSSKELAQKALELIREL 402
>gi|357012836|ref|ZP_09077835.1| cysteinyl-tRNA synthetase [Paenibacillus elgii B69]
Length = 465
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 181/426 (42%), Positives = 257/426 (60%), Gaps = 14/426 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++LKIYN++T+ KE F P+ GKV MYVCG T Y H+G+AR + FD++ RYLE +
Sbjct: 1 MSLKIYNTLTRMKEEFKPLEPGKVKMYVCGPTVYSYIHIGNARPVIFFDVVRRYLESIGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTY NFTDVDDK+I++A ++G +++ + Q+Y D L T PRV+ +M+
Sbjct: 61 EVTYAANFTDVDDKLIKKAAEMGVTVPEVADLFVQKYYEDTKGLGVREATLHPRVTQNMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I I+ ++ D AY GDVFF K P YG+LS Q LE + G RV VD RK +P D
Sbjct: 121 EIIGFISGLVEKDYAYEAGGDVFFRTAKFPEYGKLSHQNLEELQYGIRVDVDERKESPQD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GE SW SPWG GRPGWHIECSAM YL DIHGGG+DL FPHHE EIA
Sbjct: 181 FVLWKAAKPGEISWSSPWGEGRPGWHIECSAMIRKYLGDSIDIHGGGLDLTFPHHECEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS +YWMHNG V N+EKMSKSLGN + ++ + +R+F++S HYR+
Sbjct: 241 QSEGLTGQRMANYWMHNGFVNVNDEKMSKSLGNGINVHELLKTIPGEVIRYFMLSGHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PLN+S ++ A ++ I ++C AL + + ++P + + +F ++
Sbjct: 301 PLNFSDEAVEQARGSLARI----ENCLSALKHRLKSAEAGEVDPEIAAAVRNAQQQFESK 356
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M+DD NT +T F+ +N++ + ++Q L L+ L++ E + ++LG
Sbjct: 357 MNDDFNTPDAITAVFE----LVNAANPYINREQVTAPTLELL--LKQFE----AMDQVLG 406
Query: 437 LLPPGA 442
+L P A
Sbjct: 407 ILAPEA 412
>gi|332141401|ref|YP_004427139.1| cysteinyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
ecotype']
gi|327551423|gb|AEA98141.1| cysteinyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
ecotype']
Length = 460
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 189/421 (44%), Positives = 251/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN+ T++K F P+ GKVG+YVCG+T YDLSH+GHAR +SFD+L RYL HL +V
Sbjct: 2 LHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYLRHLGLDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII RAN+ GE+ +L+ R D A + L P +P VS HM++I
Sbjct: 62 KYVRNITDIDDKIIARANENGESFEALTARTIAMMHEDFAAINLLEPDVEPTVSGHMDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++I ++++ AY + GDV F V K +YG+LS Q L+ +AG RV V + K +P DF
Sbjct: 122 IEIIQRLMDKGYAYQAKSGDVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAAGKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK K GEP+W SPWG GRPGWHIECSAM+ +L + FDIHGGG DL FPHHENE+AQ
Sbjct: 182 VLWKTTKPGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH G V N+EKMSKSLGNFFT+R + + + LR FL+SAHYRS
Sbjct: 242 SCCAYDTPYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVLKEHDSETLRFFLMSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS + A A+ +Y L+ V N + + F A M
Sbjct: 302 LSYSQDNITQAKAALERLYTALRGVVV--------------NESTDLSYGGYLARFEAAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DDLN + F + LN K + +L+ + +K + ILG+
Sbjct: 348 NDDLNVPEAFSVLFD-----VARELNRQKDNAEEAGKLAAV---------LKGLGAILGM 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|261820651|ref|YP_003258757.1| cysteinyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
gi|261604664|gb|ACX87150.1| cysteinyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
gi|385870832|gb|AFI89352.1| Cysteinyl-tRNA synthetase [Pectobacterium sp. SCC3193]
Length = 461
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 195/425 (45%), Positives = 251/425 (59%), Gaps = 37/425 (8%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE L+ R E D L + P +PR + H+ I
Sbjct: 62 KYVRNVTDIDDKIIKRAIENGETSDQLTTRMIAEMHADFDALNIVHPDAEPRATHHIADI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ +I AYV GDV F+V+ +P YG LS Q L+ +AG RV + + KRNP DF
Sbjct: 122 IEMVETLIARRHAYVASNGDVMFSVDTAPGYGALSRQDLDQLQAGARVEITAVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS
Sbjct: 242 SRCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR- 376
LNYS L A A+ +Y L+ +++++ HG DEF AR
Sbjct: 302 LNYSEDNLKQARAALERLYIALRGTDLSVAA---HGG----------------DEFEARF 342
Query: 377 ---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT + F A +N L K + Q L +LRK+
Sbjct: 343 REAMDDDFNTPEAYSVLFDMA-----REVNRL-KAEDVQAANQLASALRKLSG------- 389
Query: 434 ILGLL 438
+LGLL
Sbjct: 390 VLGLL 394
>gi|385340928|ref|YP_005894800.1| cysteinyl-tRNA synthetase [Neisseria meningitidis G2136]
gi|416180165|ref|ZP_11611350.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M6190]
gi|416185171|ref|ZP_11613345.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M13399]
gi|416193715|ref|ZP_11617271.1| cysteinyl-tRNA synthetase [Neisseria meningitidis ES14902]
gi|416209140|ref|ZP_11621220.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 961-5945]
gi|421543337|ref|ZP_15989432.1| cysteine--tRNA ligase [Neisseria meningitidis NM255]
gi|433468080|ref|ZP_20425527.1| cysteine--tRNA ligase [Neisseria meningitidis 87255]
gi|433470229|ref|ZP_20427634.1| cysteine--tRNA ligase [Neisseria meningitidis 98080]
gi|433493523|ref|ZP_20450604.1| cysteine--tRNA ligase [Neisseria meningitidis NM586]
gi|433495574|ref|ZP_20452632.1| cysteine--tRNA ligase [Neisseria meningitidis NM762]
gi|433503920|ref|ZP_20460871.1| cysteine--tRNA ligase [Neisseria meningitidis NM126]
gi|254671915|emb|CBA04234.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha275]
gi|325131324|gb|EGC54035.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M6190]
gi|325133259|gb|EGC55925.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M13399]
gi|325137353|gb|EGC59941.1| cysteinyl-tRNA synthetase [Neisseria meningitidis ES14902]
gi|325141357|gb|EGC63840.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 961-5945]
gi|325199172|gb|ADY94628.1| cysteinyl-tRNA synthetase [Neisseria meningitidis G2136]
gi|402314983|gb|EJU50550.1| cysteine--tRNA ligase [Neisseria meningitidis NM255]
gi|432200763|gb|ELK56852.1| cysteine--tRNA ligase [Neisseria meningitidis 98080]
gi|432200991|gb|ELK57078.1| cysteine--tRNA ligase [Neisseria meningitidis 87255]
gi|432225583|gb|ELK81324.1| cysteine--tRNA ligase [Neisseria meningitidis NM586]
gi|432227143|gb|ELK82855.1| cysteine--tRNA ligase [Neisseria meningitidis NM762]
gi|432238194|gb|ELK93770.1| cysteine--tRNA ligase [Neisseria meningitidis NM126]
Length = 473
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 184/389 (47%), Positives = 238/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+ + F+ M+DD +T + F+
Sbjct: 351 EADDDYTRRFYVAMNDDFDTVKAVAVLFE 379
>gi|379012779|ref|YP_005270591.1| cysteinyl-tRNA synthetase [Acetobacterium woodii DSM 1030]
gi|375303568|gb|AFA49702.1| cysteinyl-tRNA synthetase CysS [Acetobacterium woodii DSM 1030]
Length = 465
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 172/387 (44%), Positives = 255/387 (65%), Gaps = 6/387 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++TQ+KE F PI GKV MY CG T Y+ H+G+AR + FD+L R+LE+ EV
Sbjct: 1 MKLYNTLTQKKETFVPIEEGKVRMYSCGPTVYNYFHIGNARPFIVFDVLRRFLEYTGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+++NFTDVDDKII R+++ +P +++ +Y QEY D L + P+VS+++ +I
Sbjct: 61 TFIQNFTDVDDKIINRSHEENISPEAVAEKYIQEYFADADALGIKRASVHPKVSENITEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+MI + AY V G+V++ VE +YG+LS Q +++ R+G R+ V+ K +P DFA
Sbjct: 121 IEMIKTLEAKGLAYNVSGNVYYRVEAFKDYGKLSKQSIDDLRSGARIEVNDEKHSPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GEP W SPWG GRPGWHIECSAMS +L + DIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKKKKDGEPYWPSPWGDGRPGWHIECSAMSKKHLGATIDIHGGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+C + +YW+HNG++ +N+KMSKS GNFFT+R I +++ +R FL+ AHYRSP+
Sbjct: 241 EGSCGKTFANYWVHNGYINIDNQKMSKSKGNFFTVRDIAKKFDLEVVRMFLLMAHYRSPV 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVAL--SPFQEHGKTARINPAAEDCINKLRDEFHAR 376
N+S + L A+ A+ +Y E L +P + +T + +++ + +F A
Sbjct: 301 NFSEVLLQQAATALERLYTAKFQMEFLLEKAPLEAATET---EMTWMNTLDQYKHDFIAA 357
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLN 403
M DD+NT+ + F+ ++ +NS+L+
Sbjct: 358 MDDDINTADAIAVIFE-LVRDLNSNLD 383
>gi|156742112|ref|YP_001432241.1| cysteinyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
gi|156233440|gb|ABU58223.1| cysteinyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
Length = 478
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 195/452 (43%), Positives = 266/452 (58%), Gaps = 35/452 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++++IYN++T+ E F + G V MYVCGVT YD +H+GHA +A+ FD++ RYLE+
Sbjct: 1 MSIRIYNTLTRTLEPFETLEPGVVKMYVCGVTVYDRAHIGHAMSAIVFDVVRRYLEYRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V +V NFTDVDDKII RA+ LG +P L+ Y E+L D+ L PR ++ M
Sbjct: 61 AVQHVVNFTDVDDKIINRAHALGRDPKELAESYIAEFLEDLEALNVKRAHIYPRATETMP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I+ I+++I AYVV+GDV+F V +P+YG+LS + L++ AG R+ +D RK NPAD
Sbjct: 121 EIQRFISRLIETGHAYVVDGDVYFRVSTAPDYGKLSRRSLDDMIAGNRIGIDERKENPAD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GEP WDSPWGPGRPGWHIECSAM+ +L + DIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKAAKPGEPFWDSPWGPGRPGWHIECSAMNLAHLGEQIDIHGGGTDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHV---------TNNNEKMSKSLGNFFTIRQITERYHPLALRH 307
Q+ + + YWMHNG + T EKMSKSLGN TIR+ RYHP LR
Sbjct: 241 QTESLTGKTFARYWMHNGMLQIQTRLADGTYKLEKMSKSLGNVVTIREFLARYHPDVLRL 300
Query: 308 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE---D 364
++S+ YRSPL + + A+D + L AL P T PA E
Sbjct: 301 TVLSSSYRSPLAFGE---EIAADQ----ERKLARLRSALEP---PIGTIEAGPAVEVLLA 350
Query: 365 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 424
+ R+ F A M DD NT+ L F D ++ IN++ + P +
Sbjct: 351 AVRTARERFIAAMDDDFNTAGALAALF-DLVRSINTARDAGVGGAP----------FAEA 399
Query: 425 ENEVKEVLRILG--LLPPGAYSEVKTAFLVLL 454
+ +E++ +LG L+ P ++ F+ LL
Sbjct: 400 QATFRELVDVLGLTLIAPRPVTQQAAPFIDLL 431
>gi|261400776|ref|ZP_05986901.1| cysteine--tRNA ligase [Neisseria lactamica ATCC 23970]
gi|269209376|gb|EEZ75831.1| cysteine--tRNA ligase [Neisseria lactamica ATCC 23970]
Length = 473
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 183/388 (47%), Positives = 239/388 (61%), Gaps = 30/388 (7%)
Query: 22 YNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYV 81
YN++T+QKE F+PI V MYVCG+T YD HLGHAR V FD++ R+L +TYV
Sbjct: 5 YNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTYV 64
Query: 82 RNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDM 141
RN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+ M
Sbjct: 65 RNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAM 124
Query: 142 ITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALW 200
I +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LW
Sbjct: 125 IETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLW 184
Query: 201 KAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCA 260
KAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 185 KAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSVG 244
Query: 261 ACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 304
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 245 ATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEV 304
Query: 305 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED 364
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P +
Sbjct: 305 VRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPSE 351
Query: 365 CINKLRDEFHARMSDDLNTSHILTGAFQ 392
+ F+ M+DD +T + F+
Sbjct: 352 AGDDYTRRFYVAMNDDFDTVKAVAVLFE 379
>gi|238754302|ref|ZP_04615659.1| Cysteinyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
gi|238707549|gb|EEP99909.1| Cysteinyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
Length = 463
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 191/421 (45%), Positives = 249/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL + +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYSGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L++R E D L P +P + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAAENNETCDQLTSRMLAEMHKDFDALNLERPDLEPHATHHISEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I D AYV GDV FAV+ P+YG LS Q LE +AG RV + KRNP DF
Sbjct: 122 IQLVQRLIERDHAYVAANGDVMFAVDSDPDYGLLSRQDLEQLQAGARVEIADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ + T + E+ F A M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGMD-----------TNAVAAGGEE----FEARFRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + + + + E++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRLKGED--------MAAANGLAAELRKLAHVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|387772152|ref|ZP_10128111.1| cysteine--tRNA ligase [Haemophilus parahaemolyticus HK385]
gi|386907797|gb|EIJ72499.1| cysteine--tRNA ligase [Haemophilus parahaemolyticus HK385]
Length = 459
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 252/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI +VGMYVCGVT YDL H GH R VSFD++ RYL + +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D L L P +PR + H+ +I
Sbjct: 62 HYVRNITDVDDKIIKRAIENNETCDQLVDRMIAEMHKDFDALNILRPDVEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE P YG LS Q L+ +AG RV + S K+NP DF
Sbjct: 122 IAMVEKLIANGHAYVAADGDVMFDVESFPKYGALSRQNLDQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW+SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWESPWGKGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T + EKMSKSLGNFF+IR + + Y +LR+F ++AHYRS
Sbjct: 242 SCCAHHGDYVNYWLHTGMLTIDREKMSKSLGNFFSIRYMLDLYDAESLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS+ L+ A A+ +Y L+ C++ + PA + + F M
Sbjct: 302 LDYSIDNLNLARSALERLYTALRGCDLTV-------------PAKGG--EQYVEAFKIAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ I +N LK + E+ + +KE+ +LGL
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTEDA--------ETANGLAVCLKELAGVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|387771057|ref|ZP_10127229.1| cysteine--tRNA ligase [Pasteurella bettyae CCUG 2042]
gi|386902976|gb|EIJ67797.1| cysteine--tRNA ligase [Pasteurella bettyae CCUG 2042]
Length = 459
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 194/434 (44%), Positives = 254/434 (58%), Gaps = 31/434 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE F PI +VGMYVCGVT YDL H GH R VSFD++ RYL L +
Sbjct: 2 LKIFNTLTREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRFLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
++RN TDVDDKII+RA + E L R E D L L P +PR + HM +I
Sbjct: 62 RFIRNITDVDDKIIKRALENNETCDQLVERMIAEMHKDFDALNILRPDVEPRATKHMPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ +I AYV +GDV F VE NYGRLS Q LE +AG RV + S K+NP DF
Sbjct: 122 IAMVEALIKRGHAYVAADGDVMFDVESYQNYGRLSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWESPWGKGRPGWHIECSAMNSKELGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T N EKMSKSL NFFTIR I +Y ++R+F ++A YRS
Sbjct: 242 SCCAHDGEYVNYWLHTGMLTINEEKMSKSLNNFFTIRDILTKYDSESVRYFFLTAQYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS + A A+ +Y L+ C+ + P ++ + + F M
Sbjct: 302 LDYSEENIGLARKALERLYTALRGCDFNVKM-----------PESDQYV----EAFKEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F A +N LK + I ++ + +K++ +LGL
Sbjct: 347 DDDFNTPGALAVLFDLA-----REINKLKTEN--------INEANRLSSRLKQLAGVLGL 393
Query: 438 LP--PGAYSEVKTA 449
L P ++ + TA
Sbjct: 394 LEQDPESFLQGDTA 407
>gi|421863184|ref|ZP_16294884.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379306|emb|CBX22079.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 483
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 183/388 (47%), Positives = 239/388 (61%), Gaps = 30/388 (7%)
Query: 22 YNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYV 81
YN++T+QKE F+PI V MYVCG+T YD HLGHAR V FD++ R+L +TYV
Sbjct: 15 YNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTYV 74
Query: 82 RNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDM 141
RN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+ M
Sbjct: 75 RNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAM 134
Query: 142 ITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALW 200
I +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LW
Sbjct: 135 IETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLW 194
Query: 201 KAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCA 260
KAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 195 KAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSVG 254
Query: 261 ACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 304
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 255 ATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEV 314
Query: 305 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED 364
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P +
Sbjct: 315 VRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPSE 361
Query: 365 CINKLRDEFHARMSDDLNTSHILTGAFQ 392
+ F+ M+DD +T + F+
Sbjct: 362 AGDDYTRRFYVAMNDDFDTVKAVAVLFE 389
>gi|329117979|ref|ZP_08246692.1| cysteine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
gi|327465867|gb|EGF12139.1| cysteine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
Length = 494
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 184/391 (47%), Positives = 236/391 (60%), Gaps = 30/391 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T+QKE F+PI V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 23 LNLYNTLTRQKEAFSPIDPANVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPL 82
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + GE L+ R+ D L L P +P+ ++++ Q+
Sbjct: 83 TYVRNITDIDDKIIARAAENGETIGELTARFIAAMHEDADALGVLRPDLEPKATENIPQM 142
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I AY GDV++AV + P YG+LSG+ L++ RAGERV VD KR+P DF
Sbjct: 143 IAMIESLIQKGKAYPAANGDVYYAVREFPAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 202
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQ
Sbjct: 203 VLWKAAKAGEPAWESPWGQGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQ 262
Query: 258 SCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYH 301
S A S+V YW+HNG + + EKMSKSLGNFFTIR + ++Y
Sbjct: 263 SVGASGHTCGHDHTLTHHGKPVASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRDVLKQYD 322
Query: 302 PLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPA 361
P +R F++ AHYRSPLNYS LD A A+ +Y L++ A A
Sbjct: 323 PEVVRFFILRAHYRSPLNYSDAHLDDAKGALARLYTALKNTPPA-------------GFA 369
Query: 362 AEDCINKLRDEFHARMSDDLNTSHILTGAFQ 392
+ N F+A M+DD T + F+
Sbjct: 370 LSETANNYTRRFYAAMNDDFGTVEAVAVLFE 400
>gi|339494031|ref|YP_004714324.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|338801403|gb|AEJ05235.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 462
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 180/368 (48%), Positives = 228/368 (61%), Gaps = 17/368 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L IYN++++ KE F P+ KV MYVCG+T YD H+GHAR V+FD++ R+L H
Sbjct: 2 MALAIYNTLSKAKEPFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGY 61
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN TD+DDKIIRRA++ GE +L R D L L P +PR +DH+
Sbjct: 62 DVTYVRNITDIDDKIIRRASENGEPFQALVERMIAAMHEDETRLNVLRPDVEPRATDHIA 121
Query: 137 QIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+ MI +I+ AY GDV++ V K YG+LS +++E+ + G R+ VD K +P
Sbjct: 122 GMHTMIQTLIDKGFAYAPGNGDVYYRVGKFAGYGKLSRRKIEDLKIGARIEVDEAKEDPL 181
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AK GEPSWDSPWGPGRPGWHIECS MS L FDIHGGG DL+FPHHENEI
Sbjct: 182 DFVLWKGAKPGEPSWDSPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEI 241
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA + WMH G V + EKMSKSLGNFFTIR++ E+YHP +R+ L+S+HYR
Sbjct: 242 AQSEAATGKLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYR 301
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SP+NYS L A A+ Y L+ A PA D + F A
Sbjct: 302 SPINYSEDSLREAKSALERFYNGLKGLPEA-------------QPAGGD---EFVARFAA 345
Query: 376 RMSDDLNT 383
M DD N+
Sbjct: 346 AMDDDFNS 353
>gi|365539623|ref|ZP_09364798.1| cysteinyl-tRNA synthetase [Vibrio ordalii ATCC 33509]
Length = 460
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 194/418 (46%), Positives = 255/418 (61%), Gaps = 26/418 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PI KVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSITRQKEEFKPIHANKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R + D L P +PR + ++++I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIADMHADFDALNMKRPDVEPRATAYIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV GDV F V K YG+LS Q L+ +AG RV VD KR+P DF
Sbjct: 122 IGLVQRLIERGFAYVASNGDVMFEVSKFDEYGKLSKQDLDQLQAGARVDVDLAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWG GRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGEGRPGWHIECSAMNSAILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ ++ + E+ +++ F M
Sbjct: 302 LNYSEDNLKQARASLERLYTALRGLDLTVPV-----------AGGEEYVSR----FTIAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
DD NT + F D + IN K K QQ S + +L + E+ +V+ IL
Sbjct: 347 DDDFNTPEAYSVLF-DMARDIN------KLKTENHQQASALGALMR---ELADVIGIL 394
>gi|452747914|ref|ZP_21947703.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri NF13]
gi|452008063|gb|EME00307.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri NF13]
Length = 461
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 180/377 (47%), Positives = 230/377 (61%), Gaps = 17/377 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L IYN++T+ KE F P+ KV MYVCG+T YD H+GHAR ++FD++ R+L H
Sbjct: 1 MALSIYNTLTKTKEAFRPLEDNKVRMYVCGMTVYDFCHIGHARVMIAFDVVTRWLRHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN TD+DDKIIRRA++ GE +L R D L L P +PR +DH+
Sbjct: 61 DVTYVRNITDIDDKIIRRASENGEPFQALVERMIAAMHEDETRLNVLRPDIEPRATDHIA 120
Query: 137 QIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+ MI +I+ AY GDV++ V K YG+LS +++E+ + G R+ VD K++P
Sbjct: 121 GMHTMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKQDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AK GEPSWDSPWG GRPGWHIECS MS L FDIHGGG DL+FPHHENEI
Sbjct: 181 DFVLWKGAKPGEPSWDSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA + WMH G V + EKMSKSLGNFFTIR++ E+YHP +R+ L+S+HYR
Sbjct: 241 AQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SP+NYS L A A+ Y L+ A PA D + F A
Sbjct: 301 SPINYSEDSLREAKSALERFYNGLKGLPEA-------------QPAGGD---EFVARFAA 344
Query: 376 RMSDDLNTSHILTGAFQ 392
M DD N+ F+
Sbjct: 345 AMDDDFNSPEACAVLFE 361
>gi|269837621|ref|YP_003319849.1| cysteinyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
gi|269786884|gb|ACZ39027.1| cysteinyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
Length = 468
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 182/378 (48%), Positives = 237/378 (62%), Gaps = 8/378 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TL++ ++ T ++ F PI G V MYVCG T YD +H+GHA +A+ FD+L RYLE+
Sbjct: 1 MTLRLTDTRTGEQRPFEPIEPGVVRMYVCGPTVYDDAHIGHAMSAIVFDVLRRYLEYSGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V + +NFTDVDDKII+RA LG P L+ R +++L D A L P T PR + ++
Sbjct: 61 RVIHAQNFTDVDDKIIQRAATLGIEPRELAERLIEDWLRDTARLNVKPATIYPRATQEID 120
Query: 137 QIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
I +MI +I AY VEG DVFF V+ P YG+LS + L+ AG R+ VD RK NP
Sbjct: 121 TIIEMIKGLIAEGHAYAVEGGDVFFRVDSFPGYGKLSHRSLDEMMAGARIEVDPRKENPM 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DFALWK AK GEP+WDSPWGPGRPGWHIECSAM +L + DIHGGG DLIFPHHENEI
Sbjct: 181 DFALWKGAKPGEPAWDSPWGPGRPGWHIECSAMIYRHLGDRIDIHGGGADLIFPHHENEI 240
Query: 256 AQSCAAC-QDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
AQS A Q+ +W+HNG + EKMSKSLGN TIR++ ER A R ++S+HY
Sbjct: 241 AQSEAFTDQEPLARFWVHNGLLQLGGEKMSKSLGNLITIRELLERGDGEAFRFLVLSSHY 300
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
RSPL +S +DSA + + ++ + A +P + A ++ R EF
Sbjct: 301 RSPLTFSDEAMDSARRGLARLQSAVRGFDPATAP------ATAPDHALARIADETRAEFR 354
Query: 375 ARMSDDLNTSHILTGAFQ 392
A M DDLNT L+ F+
Sbjct: 355 AAMDDDLNTPVALSHLFE 372
>gi|269468026|gb|EEZ79749.1| cysteinyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
Length = 452
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 193/410 (47%), Positives = 260/410 (63%), Gaps = 24/410 (5%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE+F PI KVGMYVCG+T YD H+GHAR V FD++ R+L V
Sbjct: 2 LKIYNTLSKQKEVFHPIDPNKVGMYVCGMTVYDYCHMGHARVLVMFDVITRHLRRHFPNV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E+ SL+NR+ D L LPP +PR +D M+Q+
Sbjct: 62 EYVRNITDIDDKIIKRAVENKEDIYSLTNRFIDAMHEDERALGVLPPDVEPRATDAMDQM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I AY + GDV+++V YG+LSG+ L+ AG RV +++ K++P DF
Sbjct: 122 FYMIEALIEKGIAYQAKNGDVYYSVRDFEGYGKLSGKNLDELEAGARVDIETDKKDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS H+L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKMAKPSEPSWSSPWGDGRPGWHIECSAMSTHHLGNHFDIHGGGMDLTFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMH G V N+EKMSKSL NFFTIR + E Y LR+F++S+HYRSP
Sbjct: 242 SEGANGCTFVNTWMHVGFVNINDEKMSKSLNNFFTIRVVLESYDGETLRYFIMSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD---EFH 374
LN+S L+ A ++ +Y ++ G +A + AA D +++ D F+
Sbjct: 302 LNFSDDNLNLAKTSLTRLYTAMR------------GLSA--SDAAMDEVSQRFDFESRFN 347
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 424
A + DD NT L+ F+ A K +N L++ Q Q +L + L+K+
Sbjct: 348 AALDDDFNTPIALSILFELA-KAVN-----LQRDQDIDQANALSQLLQKL 391
>gi|399018068|ref|ZP_10720254.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. CF444]
gi|398102033|gb|EJL92225.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. CF444]
Length = 465
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 176/327 (53%), Positives = 222/327 (67%), Gaps = 4/327 (1%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
LKIYN++ + K++F+PI GKV +YVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 3 NLKIYNTLARDKQVFSPIEPGKVRLYVCGMTVYDYCHLGHARVMVVFDMVQRWLRASGFD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKII RA + E L+ R+ D A L P ++PR + ++ Q
Sbjct: 63 VTYVRNITDIDDKIIHRAIENRETIGQLTQRFIDAMDEDSAALGVQKPDHEPRATAYVPQ 122
Query: 138 IKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ D+I + NN AY +GDV ++V P YG+LSG+ L++ RAGERV V++ KR+P D
Sbjct: 123 MLDLIRTLQNNGLAYQGSDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWKAAK EP+ WDSPWG GRPGWHIECSAM+ L FDIHGGG DL FPHHEN
Sbjct: 183 FVLWKAAKESEPAEVKWDSPWGKGRPGWHIECSAMANDLLGDHFDIHGGGQDLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A Q V+YWMHNG V +NEKMSKSLGNFFTIR + ++Y P +R F++ AH
Sbjct: 243 EIAQSEGAHQHGFVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVLKKYDPEVVRFFILRAH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQ 340
YRSPLNYS LD A A+ Y L+
Sbjct: 303 YRSPLNYSDAHLDDARQALTRFYTALK 329
>gi|312144267|ref|YP_003995713.1| cysteinyl-tRNA synthetase [Halanaerobium hydrogeniformans]
gi|311904918|gb|ADQ15359.1| cysteinyl-tRNA synthetase [Halanaerobium hydrogeniformans]
Length = 484
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 168/385 (43%), Positives = 249/385 (64%), Gaps = 2/385 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YN++ +KE F + G V MYVCG+T + SH+GH R+A+++D++ RYLE+ EV
Sbjct: 2 LKVYNTLNNKKEKFETVEPGLVRMYVCGLTVQNYSHIGHIRSAINYDVIRRYLEYSGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y+ NFTD+++KI++RA + G L+++Y +L D+ RVS+++++I
Sbjct: 62 EYISNFTDINEKIVKRAEEEGMTAAELADKYANAFLEDIRSFNIKAADQYLRVSENIDEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+M++++I AY + GDV+F+V+ +YG+LSG+ +E+ +AG R+AV+ K+NP DFA
Sbjct: 122 IEMVSKLIEKGYAYEINGDVYFSVDSFEDYGKLSGRSIEDMQAGARIAVNEDKKNPLDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK +AGE WDSPWG G PGWHIECSAMS L + FDIHGGG+DLIFPHHENEIAQS
Sbjct: 182 LWKKVEAGE-GWDSPWGEGWPGWHIECSAMSMKRLGATFDIHGGGVDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V YW+HNG V + EKMSKS GNFFT R++ + + +R+FL++ HYRSP+
Sbjct: 241 EAYSGQKFVKYWLHNGTVNLSGEKMSKSQGNFFTSREVLKEFSAQVIRYFLLTRHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++S +L+ A ++ + T Q+ LS E R++ ++R EF +
Sbjct: 301 DFSYEKLEEAQTSLQRLTNTRQELAKVLSGDIESSTGDRLDKDFLKKTKEIRAEFKKALD 360
Query: 379 DDLNTSHILTGAFQDALKFINSSLN 403
DD NT+ + G D + INS +N
Sbjct: 361 DDFNTAEAI-GVLHDFVGEINSYIN 384
>gi|260655864|ref|ZP_05861333.1| cysteine--tRNA ligase [Jonquetella anthropi E3_33 E1]
gi|424844377|ref|ZP_18268988.1| cysteinyl-tRNA synthetase [Jonquetella anthropi DSM 22815]
gi|260629480|gb|EEX47674.1| cysteine--tRNA ligase [Jonquetella anthropi E3_33 E1]
gi|363985815|gb|EHM12645.1| cysteinyl-tRNA synthetase [Jonquetella anthropi DSM 22815]
Length = 467
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 180/421 (42%), Positives = 254/421 (60%), Gaps = 10/421 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN +T+ KELF P+ GKV Y CG T YD H+G+AR + FD+L RYLE+
Sbjct: 1 MALSLYNDLTRNKELFVPLADGKVSFYSCGPTVYDYFHIGNARPFIVFDVLRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+V+NFTD+DDK+I RAN G L+ + +Y D L +Y PR +++M
Sbjct: 61 QVTFVQNFTDIDDKMIDRANRDGITVAQLAEKTIADYYEDADALGIKRASYNPRATEYMP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
QI ++ ++I+ AY V G V+F V+ P YGRLS Q ++ AG R+ VD K+ P D
Sbjct: 121 QIIQLVQKLIDRGHAYAVGGTVYFDVKSFPQYGRLSKQNMDELLAGARIEVDDAKKCPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK K GEP+WDSPWG GRPGWHIECS MS L DIH GG+DL FPHHENEIA
Sbjct: 181 FVLWKPQKPGEPAWDSPWGKGRPGWHIECSVMSTALLGDTIDIHSGGVDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ AA V++W+HN ++ + EKMSKSLGNF T R+ + Y PLA+R F++SAHYRS
Sbjct: 241 QAEAATGKPFVNFWLHNEYILIDKEKMSKSLGNFLTAREARKHYSPLAIRAFMLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S L+ A V + L++C L + + + + + + + R++F
Sbjct: 301 PVNFSPEGLEQAGAMV----ERLRNCWSDLQFAKSRRDLSYDDASLSEAVRQGREDFEEA 356
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ L GA + +K +N+ L K ++ K +++EV+ +LG
Sbjct: 357 MDDDFNTAGAL-GAVFEVVKAVNTHL-----KSSGALSGKGLDDAEKFFRDIEEVMGLLG 410
Query: 437 L 437
L
Sbjct: 411 L 411
>gi|383753596|ref|YP_005432499.1| putative cysteinyl-tRNA synthetase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365648|dbj|BAL82476.1| putative cysteinyl-tRNA synthetase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 475
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 179/376 (47%), Positives = 240/376 (63%), Gaps = 7/376 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YN+M++ KE F P+ G+ +Y CGVT Y+ H+G+AR V++D++ RYL H +V
Sbjct: 2 LKVYNTMSRSKEEFKPLKEGEASIYCCGVTPYNHPHIGNARPFVTWDVIRRYLAHKGYKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y++NFTDVDDKIIR AN+ G +S RY Y M L PRVS+ + I
Sbjct: 62 RYIQNFTDVDDKIIRTANEEGVKWSDISGRYIDAYFKAMDALNVKRADIYPRVSETIPDI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++++ AY V+ GDVF+ VEK YG+LSG++LE+ +AG R+ VD RK +P DF
Sbjct: 122 IAMVQKLVDKGYAYAVDNGDVFYRVEKFAGYGKLSGRKLEDMQAGARIDVDERKEHPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSWDSPWG GRPGWHIECS MS YL KFD HGGG DLIFPHHENEIAQ
Sbjct: 182 ALWKAAKPGEPSWDSPWGKGRPGWHIECSTMSLKYLGEKFDFHGGGSDLIFPHHENEIAQ 241
Query: 258 S--CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
S C + S YW+HNG +T +NEKMSKS NFFT++ I Y +R F++ HYR
Sbjct: 242 SQACIGDEHSFAQYWLHNGFITIHNEKMSKSKNNFFTVKDILAEYPGEVVRFFILQTHYR 301
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPL++S +L A ++ + Q+ + L+ + GK+ A+ ++ EFH
Sbjct: 302 SPLDFSDERLKEAQTSLNRLAQSKGFMDELLA---KAGKSDTAKELADKAAGYVK-EFHE 357
Query: 376 RMSDDLNTSHILTGAF 391
M DD NT+ ++ F
Sbjct: 358 AMDDDFNTALAISQIF 373
>gi|253689302|ref|YP_003018492.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259511839|sp|C6DAX2.1|SYC_PECCP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|251755880|gb|ACT13956.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 461
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 244/421 (57%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE L+ R E D L L P +PR + H+ I
Sbjct: 62 KYVRNVTDIDDKIIKRAAENGETSDQLTTRMIAEMHADFDALNILRPDAEPRATHHITDI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ +I AYV GDV F+V+ +P YG LS Q L+ +AG RV + KRNP DF
Sbjct: 122 IEMVETLIARRHAYVASNGDVMFSVDTAPGYGVLSRQDLDQLQAGARVEITEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + AA ++ F M
Sbjct: 302 LNYSEDNLKQARAALERLYTALRGTD---------------PDAAAQGGDEFEGRFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N L K + Q L +LRK+ +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRL-KTEDAQAANQLASALRKLSG-------VLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|310826702|ref|YP_003959059.1| cysteinyl-tRNA synthetase [Eubacterium limosum KIST612]
gi|308738436|gb|ADO36096.1| cysteinyl-tRNA synthetase [Eubacterium limosum KIST612]
Length = 465
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 177/406 (43%), Positives = 253/406 (62%), Gaps = 2/406 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++TQ+KE F PI GKV MY CG T Y+ H+G+AR + FD+L R+LE++ +V
Sbjct: 1 MKLYNTLTQKKEAFVPIEEGKVRMYSCGPTVYNYFHIGNARPFIVFDVLRRFLEYIGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTDVDDKII R+ + G ++++Y EY D L PRVSDHM +I
Sbjct: 61 KFVQNFTDVDDKIINRSIEEGITAAEVADKYIAEYFKDADALGIRRADVHPRVSDHMPEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+MI ++ AY V+G+V++ V+ +YG+LS Q +++ ++G R+ V+ KR+P DFA
Sbjct: 121 IEMIKELEARGLAYNVDGNVYYQVDHFHDYGKLSKQSIDDLKSGARIDVNDEKRSPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GEP W+SPWG GRPGWHIECSAMS +L DIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKKKKDGEPYWESPWGQGRPGWHIECSAMSRKHLGESIDIHGGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+C +YW+HNG++ NNEKMSKS GNFFT+R I + Y +R F++ AHYRSP+
Sbjct: 241 EGSCGCKFANYWVHNGYININNEKMSKSKGNFFTVRDIAKHYDLEVVRMFMLMAHYRSPV 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L A +A+ +Y E L + + D + + + F M+
Sbjct: 301 NFSDELLGQAQNALERLYNAKYQMEYLLENNKSEA-ASEDEKTWMDNLAQYKKGFIDAMN 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 424
DDLNT+ + F+ ++ NS+L+ ++ + L L + L +
Sbjct: 360 DDLNTADAIAAIFE-LVRDTNSNLSEASSREAVKAALDLFKELTGV 404
>gi|410615541|ref|ZP_11326560.1| cysteinyl-tRNA synthetase [Glaciecola psychrophila 170]
gi|410164954|dbj|GAC40449.1| cysteinyl-tRNA synthetase [Glaciecola psychrophila 170]
Length = 459
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 183/384 (47%), Positives = 236/384 (61%), Gaps = 16/384 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T+QKE F P+ GKVG+YVCG+T YD+ H+GHAR +SFDL+ RY+ EV
Sbjct: 2 LHIYNTLTRQKEQFKPLQAGKVGLYVCGITVYDVCHVGHARTYLSFDLMVRYMRSRGLEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII RAN+ G P + + D A + L P +PRV+ H+ +I
Sbjct: 62 KYVRNITDVDDKIISRANEQGLTPDQFTEKTIARMHEDFAAIGLLEPDVEPRVTTHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++I ++I+ AY + GDV F V +YGRL Q L+ +G RVAV + KR+P DF
Sbjct: 122 INVIQRLIDKGYAYQADSGDVLFEVSTYADYGRLGRQDLDQLNSGSRVAVAAEKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK+ K GEP W+SPWG GRPGWHIECSAM+ +L FDIHGGG DL FPHHENE+AQ
Sbjct: 182 VLWKSVKPGEPFWESPWGNGRPGWHIECSAMNHKHLGEHFDIHGGGSDLTFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V N EKMSKSLGNFFT+R + E Y +R+FL+SA YRS
Sbjct: 242 SCCAFDTPYVNYWMHTGMVQVNQEKMSKSLGNFFTLRDVLEVYDAETVRYFLMSAQYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS + A ++ +Y L+D ++P N + + + F+ M
Sbjct: 302 LSYSDSFIQQARASLERLYTALRD----VTP----------NMDVDVSMGDYQTRFNQAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSS 401
DD NT F D K IN S
Sbjct: 348 DDDFNTPEAFAILF-DLAKEINKS 370
>gi|388257084|ref|ZP_10134264.1| cysteinyl-tRNA synthetase [Cellvibrio sp. BR]
gi|387939288|gb|EIK45839.1| cysteinyl-tRNA synthetase [Cellvibrio sp. BR]
Length = 466
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 183/384 (47%), Positives = 242/384 (63%), Gaps = 13/384 (3%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++T+QKE+F PI GK+ MYVCG+T YD H+GHAR V+FD++ ++L +V
Sbjct: 2 LQIYNTLTRQKEIFKPIYPGKISMYVCGITVYDYCHIGHARVLVAFDVITKFLRSQGWDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+YVRN TD+DDKII+RAN+ GE +L+ R+ D A L P +PR + +++QI
Sbjct: 62 SYVRNITDIDDKIIKRANENGEEFSALTKRFIDYMHEDEARLGIARPDIEPRATAYIDQI 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM +I+ AY + GDV++ V + +YG+L+ + ++ G R+ VD K +P DF
Sbjct: 122 VDMNKTLIDKGFAYAAINGDVYYRVTRFADYGKLTNKNVDELLVGARIEVDEVKEDPRDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAKAGEP+W SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKAGEPAWKSPWGNGRPGWHIECSAMSKNCCGETFDIHGGGPDLPFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+YWMH G V + EKMSKSLGNFFTIR + E+YHP +R L+S+HYRSP
Sbjct: 242 SEAANGCKYVNYWMHAGAVRVDGEKMSKSLGNFFTIRDVLEKYHPEVVRFLLVSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NY+ L A + Y L+D L P TA A F M
Sbjct: 302 INYAEDNLIEARTGLERFYGALRDYADVL-PTSLTAMTASPYYTA----------FVEAM 350
Query: 378 SDDLNTSHILTGAFQDALKFINSS 401
+DD NT L G F D ++ +N++
Sbjct: 351 NDDFNTRVALAGMF-DLVRDLNNA 373
>gi|113867241|ref|YP_725730.1| cysteinyl-tRNA synthetase [Ralstonia eutropha H16]
gi|123134207|sp|Q0KCA9.1|SYC_CUPNH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|113526017|emb|CAJ92362.1| Cysteinyl-tRNA synthetase [Ralstonia eutropha H16]
Length = 462
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 196/412 (47%), Positives = 250/412 (60%), Gaps = 31/412 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++ ++K+ F PI GKV MYVCG+T YD H+GHAR V FD+++R+L EV
Sbjct: 4 LNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+N TD+DDKIIRRA + GE L+ R+ Q D A L + P ++PR +D++ Q+
Sbjct: 64 TYVQNITDIDDKIIRRAAENGETIGELTTRFIQYMHEDAAALGVIRPDHEPRATDYVPQM 123
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DMI ++ AY +GDV ++V K YG+LSG+ LE+ RAGERV+ + K++P DF
Sbjct: 124 LDMIGKLEAKGLAYQASDGDVNYSVRKFAGYGKLSGKSLEDLRAGERVSANDAKQDPLDF 183
Query: 198 ALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWK+AKA EP WDS WG GRPGWHIECSAMS L FDIHGGG DL FPHHENE
Sbjct: 184 VLWKSAKASEPPESKWDSKWGAGRPGWHIECSAMSCTLLGEHFDIHGGGADLQFPHHENE 243
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y +R F++ AHY
Sbjct: 244 IAQSEGASGKPFVNMWMHNGFVRINDEKMSKSLGNFFTIREVLKSYDAEVVRFFILRAHY 303
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
RSPLNYS LD A A+ +Y L+D + P C DE H
Sbjct: 304 RSPLNYSDAHLDDARHALTRLYTALKDSQ----------------PGG--CAVDW-DEPH 344
Query: 375 AR-----MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK--QQQLSLIE 419
AR M DD NT ++ F D IN + + +Q K L L+E
Sbjct: 345 ARRFAEAMGDDFNTPIAMSVLF-DLASEINRTGSTAAARQLKGLAGTLGLLE 395
>gi|163816509|ref|ZP_02207873.1| hypothetical protein COPEUT_02698 [Coprococcus eutactus ATCC 27759]
gi|158448209|gb|EDP25204.1| cysteine--tRNA ligase [Coprococcus eutactus ATCC 27759]
Length = 463
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 247/406 (60%), Gaps = 10/406 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KI N++T++KE F PI GKVG+YVCG T YD H+G+AR + FD L RYLE+ EV
Sbjct: 1 MKILNTLTRRKEEFKPINEGKVGIYVCGPTVYDYIHIGNARPMIVFDTLRRYLEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKII+RAN G + +S RY E DMA L T P+ ++ + +
Sbjct: 61 NYVSNFTDVDDKIIKRANAEGVDASVISERYIAEVKKDMAALNVREATTHPKATEEIPDM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPA 195
+M+ +I D AY V G V+F K +YG+LS + +++ R+G R V+ K +P
Sbjct: 121 IEMVKTLIEKDYAYEVNGTVYFRTRKFKDYGKLSKKNIDDLRSGNRDLLVSGIDEKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK K GEPSW SPWG GRPGWH+ECS MS Y+ DIH GG DLIFPHHENEI
Sbjct: 181 DFVLWKPKKEGEPSWPSPWGDGRPGWHLECSVMSKKYIGDVIDIHAGGEDLIFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA YWMHNG + NNEKMSKSLGNFFT+R+I E+Y +R F++SAHYR
Sbjct: 241 AQSEAANGTEFARYWMHNGFLKINNEKMSKSLGNFFTVREIAEKYPLQVIRFFMLSAHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPLN+S ++++ + + I + + +G ++ + D ++ ++
Sbjct: 301 SPLNFSAELVEASKNGLERILTAVDRLKSI------NGIDGDVDKSVADEMDAFVKKYED 354
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
M DDLNT+ ++ F+ +K+ N ++ K + L+ IE L
Sbjct: 355 AMDDDLNTADAISVIFE-LVKYANVNVTEESSKATVELVLNTIEKL 399
>gi|162139463|ref|YP_001172566.2| cysteinyl-tRNA synthetase [Pseudomonas stutzeri A1501]
gi|187631654|sp|A4VL73.2|SYC_PSEU5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 461
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 181/377 (48%), Positives = 230/377 (61%), Gaps = 17/377 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L IYN++++ KE F P+ KV MYVCG+T YD H+GHAR V+FD++ R+L H
Sbjct: 1 MALAIYNTLSKAKEPFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN TD+DDKIIRRA++ GE +L R D L L P +PR +DH+
Sbjct: 61 DVTYVRNITDIDDKIIRRASENGEPFQALVERMIAAMHEDETRLNVLRPDVEPRATDHIA 120
Query: 137 QIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+ MI +I+ AY GDV++ V K YG+LS +++E+ + G R+ VD K +P
Sbjct: 121 GMHTMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AK GEPSWDSPWGPGRPGWHIECS MS L FDIHGGG DL+FPHHENEI
Sbjct: 181 DFVLWKGAKPGEPSWDSPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA + WMH G V + EKMSKSLGNFFTIR++ E+YHP +R+ L+S+HYR
Sbjct: 241 AQSEAATGKLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SP+NYS L A A+ Y L+ A PA D + F A
Sbjct: 301 SPINYSEDSLREAKSALERFYNGLKGLPEA-------------QPAGGD---EFVARFAA 344
Query: 376 RMSDDLNTSHILTGAFQ 392
M DD N+ F+
Sbjct: 345 AMDDDFNSPEACAVLFE 361
>gi|154485049|ref|ZP_02027497.1| hypothetical protein EUBVEN_02770 [Eubacterium ventriosum ATCC
27560]
gi|149734002|gb|EDM50121.1| cysteine--tRNA ligase [Eubacterium ventriosum ATCC 27560]
Length = 470
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 180/391 (46%), Positives = 246/391 (62%), Gaps = 11/391 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN++T++KE F P+ GKV MYVCG T Y+L H+G+AR + FD RYLE+ +V
Sbjct: 1 MKIYNTLTKKKEEFVPLEEGKVKMYVCGPTVYNLIHIGNARPMIIFDTFRRYLEYKGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKII++A + G +S RY +E DM DL P T P + ++ +
Sbjct: 61 NYVSNFTDVDDKIIKKAIEEGTTAEEISQRYIKECKKDMHDLNIEPATTHPLATQEIDGM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPA 195
+MI +I+ AY +G V++ K +YG+LS + +++ AG R VA + K +P
Sbjct: 121 IEMIKTLIDKGYAYDADGTVYYRTRKFKDYGKLSKKNIDDLEAGHRDIKVAGEESKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK K GEPSW SPW GRPGWHIECS MS YL + DIH GG DLIFPHHENEI
Sbjct: 181 DFVLWKPKKEGEPSWPSPWSDGRPGWHIECSVMSKKYLGDEIDIHAGGEDLIFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA YWMHNG + NN+KMSKSLGNFFT+R I+E+Y LR F++SAHYR
Sbjct: 241 AQSEAANGCEFSKYWMHNGFLNINNKKMSKSLGNFFTVRDISEKYDLQVLRFFMLSAHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD---E 372
SPLN+S ++SA + + I + +S +GK ++ A +++ ++ +
Sbjct: 301 SPLNFSDDLMESAKNGLERIITSGAKIRDIIS----NGKDGKVTDAEAKLLDEAKEYITK 356
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLN 403
F M DD NT++ ++ F+ +KF NS+LN
Sbjct: 357 FEEAMDDDCNTANAISAVFE-LVKFANSNLN 386
>gi|293392469|ref|ZP_06636789.1| cysteine-tRNA ligase [Serratia odorifera DSM 4582]
gi|291424871|gb|EFE98080.1| cysteine-tRNA ligase [Serratia odorifera DSM 4582]
Length = 461
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 245/421 (58%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCGVT YDL H+GH R V+FD++ RYL +L ++
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + GE L+ R E D L P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIRRAAENGETCDQLTGRMLAEMHADFDALLIERPDLEPRATQHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV GDV FA++ +YG LS Q L+ +AG RV VD KRNP DF
Sbjct: 122 IELTERLIARGHAYVASNGDVMFAIDSDADYGLLSRQDLDQLQAGARVEVDDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLGYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ + +P D + F M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDPLATP---------------DGGAEFEARFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + E LRK+ ++LGL
Sbjct: 347 DDDFNTPEAYSALFD-----LAREVNRLKNEDMAAANAMAAE-LRKLA-------KVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|392421163|ref|YP_006457767.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri CCUG 29243]
gi|390983351|gb|AFM33344.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri CCUG 29243]
Length = 461
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 177/352 (50%), Positives = 224/352 (63%), Gaps = 2/352 (0%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L IYN++T+ KE F P+ KV MYVCG+T YD H+GHAR V+FD++ R+L H
Sbjct: 1 MALSIYNTLTKTKEAFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN TD+DDKIIRRA++ GE +L R D L L P +PR +DH+
Sbjct: 61 DVTYVRNITDIDDKIIRRASENGEPFQALVERMIDAMHEDETRLNVLRPDIEPRATDHIA 120
Query: 137 QIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+ MI +I+ AY GDV++ V K YG+LS +++E+ + G R+ VD K +P
Sbjct: 121 GMHTMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AK GEPSWDSPWG GRPGWHIECS MS L FDIHGGG DL+FPHHENEI
Sbjct: 181 DFVLWKGAKPGEPSWDSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA + WMH G V + EKMSKSLGNFFTIR++ E+YHP +R+ L+S+HYR
Sbjct: 241 AQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
SP+NYS L A A+ Y L+ A +P AR A +D N
Sbjct: 301 SPINYSEDSLREAKGALERFYNGLKGLPEA-TPGGGDEFVARFGVAMDDDFN 351
>gi|385809061|ref|YP_005845457.1| cysteinyl-tRNA synthetase [Ignavibacterium album JCM 16511]
gi|383801109|gb|AFH48189.1| Cysteinyl-tRNA synthetase [Ignavibacterium album JCM 16511]
Length = 469
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 185/411 (45%), Positives = 252/411 (61%), Gaps = 11/411 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE FTP+ V MY+CG T YD H+G+AR+ + D++ RYLE+ V
Sbjct: 2 LKIYNTLTKQKEEFTPLNSPLVKMYICGPTVYDYFHIGNARSFIMSDIVRRYLEYKGYVV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V N TDVDDKII++AN+ G++ ++ Y +E+ D+ L+ P TY PR ++ M +
Sbjct: 62 TFVMNLTDVDDKIIKKANEEGKSAKEVAEFYIREFFTDIEKLRIKPATYYPRATEFMNDM 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+MI ++ AY V+G+VF+ V K +YG+LSG++ E AG RV V+ +K++P DFA
Sbjct: 122 IEMIKRLEEKGIAYNVDGNVFYDVSKFMDYGKLSGKKTEELEAGARVEVNEQKKHPLDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP W+SPWG GRPGWHIECSAMS L FDIH GG DLIFPHHENEIAQS
Sbjct: 182 LWKKAKEGEPYWESPWGKGRPGWHIECSAMSCKLLGESFDIHAGGHDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA + YW+H G + N EKMSKSLGNFFT R+I ++Y A+R F + AHYR PL
Sbjct: 242 EAANEKPFAKYWLHFGFLNINEEKMSKSLGNFFTAREILKKYSAEAIRLFFVQAHYRGPL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L +A V I L+ E GK N + +F M
Sbjct: 302 NFSDELLQAAEKGVEKIQNLADKLNEELNKTSE-GKKVNFN------FEQWYKKFEEAMD 354
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES-LRKIENEV 428
DD N++ T D + +N + + + P +Q L+ +S L+K +EV
Sbjct: 355 DDFNSAQA-TAVLFDFTREVNRLI--AESENPDKQFLTEAKSFLKKTADEV 402
>gi|257455309|ref|ZP_05620544.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
gi|257447271|gb|EEV22279.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
Length = 482
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 182/394 (46%), Positives = 248/394 (62%), Gaps = 19/394 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ + IY+SM+ QK FTP+ GKVGMYVCG+T YD H+GHAR V FD++ R+L H+
Sbjct: 8 MPITIYDSMSGQKRPFTPLEAGKVGMYVCGMTVYDYCHIGHARVMVGFDVVVRWLRHIGY 67
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YVRN TD+DDKII RA D GE+ L++R+ + D +L C P +P+ +D +
Sbjct: 68 DVNYVRNITDIDDKIINRAKDNGESIYELTDRFIKAMHEDADNLGCERPNSEPKATDFIP 127
Query: 137 QIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRN 193
Q++ +I + + + AY GDV++AVE YG+LS +RL + +AG ERV V++ K+N
Sbjct: 128 QMQHLIQTLESKNLAYQGATGDVYYAVENFAEYGKLSKRRLADMQAGASERVNVETDKKN 187
Query: 194 PADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPH 250
P DF LWK+AK EPS W SPWG GRPGWHIECSAMS L FDIHGGG DL FPH
Sbjct: 188 PFDFVLWKSAKQTEPSETKWQSPWGVGRPGWHIECSAMSTCCLGDTFDIHGGGHDLQFPH 247
Query: 251 HENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLI 310
HENEIAQS A + + WMH G + + EKMSKSLGNFFTIR + ++HP +R F++
Sbjct: 248 HENEIAQSEGATGKTYANNWMHVGFINVDGEKMSKSLGNFFTIRDVMGQFHPETIRFFIL 307
Query: 311 SAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLR 370
S+HYRSP+N+S L A ++ +YQ L+ E P E +T P
Sbjct: 308 SSHYRSPVNFSDSALKEAQTSLTRLYQALKSVESLTEPAGEIDETPFETP---------- 357
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNM 404
F+ M DD N++ ++ F A + IN ++N+
Sbjct: 358 --FNQAMCDDFNSAGAVSVLFSLA-REINKAVNL 388
>gi|386020696|ref|YP_005938720.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
gi|327480668|gb|AEA83978.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
Length = 462
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 181/377 (48%), Positives = 230/377 (61%), Gaps = 17/377 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L IYN++++ KE F P+ KV MYVCG+T YD H+GHAR V+FD++ R+L H
Sbjct: 2 MALAIYNTLSKAKEPFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGY 61
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN TD+DDKIIRRA++ GE +L R D L L P +PR +DH+
Sbjct: 62 DVTYVRNITDIDDKIIRRASENGEPFQALVERMIAAMHEDETRLNVLRPDVEPRATDHIA 121
Query: 137 QIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+ MI +I+ AY GDV++ V K YG+LS +++E+ + G R+ VD K +P
Sbjct: 122 GMHTMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKEDPL 181
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AK GEPSWDSPWGPGRPGWHIECS MS L FDIHGGG DL+FPHHENEI
Sbjct: 182 DFVLWKGAKPGEPSWDSPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEI 241
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA + WMH G V + EKMSKSLGNFFTIR++ E+YHP +R+ L+S+HYR
Sbjct: 242 AQSEAATGKLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYR 301
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SP+NYS L A A+ Y L+ A PA D + F A
Sbjct: 302 SPINYSEDSLREAKSALERFYNGLKGLPEA-------------QPAGGD---EFVARFAA 345
Query: 376 RMSDDLNTSHILTGAFQ 392
M DD N+ F+
Sbjct: 346 VMDDDFNSPEACAVLFE 362
>gi|339325369|ref|YP_004685062.1| cysteinyl-tRNA synthetase [Cupriavidus necator N-1]
gi|338165526|gb|AEI76581.1| cysteinyl-tRNA synthetase CysS [Cupriavidus necator N-1]
Length = 462
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 194/418 (46%), Positives = 251/418 (60%), Gaps = 33/418 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++ ++K+ F PI GKV MYVCG+T YD H+GHAR V FD+++R+L EV
Sbjct: 4 LNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+N TD+DDKIIRRA + GE L+ R+ Q D A L + P ++PR +D++ Q+
Sbjct: 64 TYVQNITDIDDKIIRRAAENGETIGELTTRFIQYMHEDAAALGVIRPDHEPRATDYVPQM 123
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DMI ++ AY +GDV ++V K YG+LSG+ LE+ RAGERV+ + K++P DF
Sbjct: 124 LDMIGKLEARGLAYQASDGDVNYSVRKFDGYGKLSGKSLEDLRAGERVSANDAKQDPLDF 183
Query: 198 ALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWK+AKA EP WDS WG GRPGWHIECSAMS L FDIHGGG DL FPHHENE
Sbjct: 184 VLWKSAKASEPPESKWDSKWGAGRPGWHIECSAMSCTLLGEHFDIHGGGADLQFPHHENE 243
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y +R F++ AHY
Sbjct: 244 IAQSEGASGKPFVNMWMHNGFVRINDEKMSKSLGNFFTIREVLKSYDAEVVRFFILRAHY 303
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
RSPLNYS LD A A+ +Y L+D + P C DE H
Sbjct: 304 RSPLNYSDAHLDDARHALTRLYTALKDSQ----------------PGG--CAVDW-DEPH 344
Query: 375 AR-----MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENE 427
AR M DD NT ++ F + S +N +Q +L +L +E +
Sbjct: 345 ARRFAEAMGDDFNTPIAMSVLFD-----LASEINRTGSTAAARQLKALAGTLGLLERD 397
>gi|388569689|ref|ZP_10156078.1| cysteinyl-tRNA synthetase [Hydrogenophaga sp. PBC]
gi|388263112|gb|EIK88713.1| cysteinyl-tRNA synthetase [Hydrogenophaga sp. PBC]
Length = 477
Score = 357 bits (916), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 192/413 (46%), Positives = 248/413 (60%), Gaps = 25/413 (6%)
Query: 7 TGTVAAPKMDLTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDL 66
GT ++ +TL I+N++T++ E F PI G V MYVCG+T YDL H+GHAR+ ++FD+
Sbjct: 8 VGTAPVLRLAMTLHIHNTLTRRLEPFAPIEPGHVRMYVCGITVYDLCHVGHARSNIAFDV 67
Query: 67 LYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPT 126
R+LE VTYVRN TD+DDKIIRRA GE+ +L++R D L PT
Sbjct: 68 ARRWLEATGYRVTYVRNITDIDDKIIRRAVQNGESVRALTDRMIAAMYEDFDALGIARPT 127
Query: 127 YQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERV 185
+ PR +D++ Q+ D++ ++ + AY +GDV +AV + P YG+LSG+ L+ AGERV
Sbjct: 128 HDPRATDYVPQMLDIVRRLEERNLAYRSGDGDVNYAVRRFPGYGKLSGKTLDELNAGERV 187
Query: 186 AVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGG 242
AV K +P DF LWKAAK EP+ WDSP+G GRPGWHIECSAMS L FDIHGG
Sbjct: 188 AVAQGKDDPLDFVLWKAAKPEEPADAQWDSPYGRGRPGWHIECSAMSCALLGETFDIHGG 247
Query: 243 GIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHP 302
G DL FPHHENEIAQS A WMHNG V +NEKMSKSLGNFFTIR++ +RY
Sbjct: 248 GADLQFPHHENEIAQSEGANGVPLAKVWMHNGFVNVDNEKMSKSLGNFFTIREVLQRYDA 307
Query: 303 LALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA 362
+R F++ AHYRSPLN+S LD A A+ +Y L + A A
Sbjct: 308 ETVRFFMLRAHYRSPLNHSDAHLDDARAALKRLYTALSAVKAA--------------DVA 353
Query: 363 EDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 415
D + F A M DD NT L+ F + S +N + K P+Q L
Sbjct: 354 MDWADPFAARFKAAMDDDFNTPVALSVLFD-----LASEIN--RGKDPRQAGL 399
>gi|17545886|ref|NP_519288.1| cysteinyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
gi|21264003|sp|Q8Y077.1|SYC_RALSO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|17428181|emb|CAD14869.1| probable cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs)
protein [Ralstonia solanacearum GMI1000]
Length = 465
Score = 357 bits (916), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 185/383 (48%), Positives = 241/383 (62%), Gaps = 25/383 (6%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+LKIYN++ ++K+ F PI G+V MYVCG+T YD H+GHAR V FD++ R+L +
Sbjct: 3 SLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASGYD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKII+RA + GE +L+NR+ D L P +PR ++++ Q
Sbjct: 63 VTYVRNITDIDDKIIKRAVENGETIGALTNRFIAAMHEDADALGVQRPDREPRATEYVPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI ++ +N AY +GDV +AV K P YG+LSG+ LE+ RAGERVA + K++P D
Sbjct: 123 MLSMIGRLQDNGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDAKQDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK+AKA EP+ W SPWG GRPGWHIECSAMS L + FD+HGGG DL FPHHEN
Sbjct: 183 FVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCDLLGTHFDLHGGGADLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A + V+ WMHNG V N+EKMSKSLGNFFTIR + + Y P +R F++ +H
Sbjct: 243 EIAQSEGASGSTFVNTWMHNGFVRVNDEKMSKSLGNFFTIRDVLKVYDPEVVRFFILRSH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQD--CEVALSP--FQEHGKTARINPAAEDCINKL 369
YRS LNYS + LD A A+ +Y L+D E P + HGK
Sbjct: 303 YRSDLNYSDVHLDDARHALTRLYTALKDVPAEAQARPDWNEPHGK--------------- 347
Query: 370 RDEFHARMSDDLNTSHILTGAFQ 392
F M DD NT + F+
Sbjct: 348 --RFREAMHDDFNTPVAMAVLFE 368
>gi|126641281|ref|YP_001084265.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
Length = 447
Score = 357 bits (916), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 181/400 (45%), Positives = 249/400 (62%), Gaps = 26/400 (6%)
Query: 42 MYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGEN 101
MYVCG+T YD H+GHAR V+FD + R+L +V Y+RN TD+DDKII+RAN+ GE
Sbjct: 1 MYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRYIRNITDIDDKIIKRANENGET 60
Query: 102 PLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFF 160
L+ R+ D A+L CL P P+ +++++Q+++MI ++N AY GDV+F
Sbjct: 61 IQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYF 120
Query: 161 AVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGR 218
V K YGRLSG++LE+ +AG ERV V+ K++P DF LWK AK EPSW SPWG GR
Sbjct: 121 EVTKFEKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGR 180
Query: 219 PGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTN 278
PGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G +
Sbjct: 181 PGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINV 240
Query: 279 NNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQT 338
+ EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L A ++ Y +
Sbjct: 241 DGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHS 300
Query: 339 LQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFI 398
+ + Q +G+T E + F+ M DD NT+ + F+ +
Sbjct: 301 FKAYQ------QVYGQT-----TTEALDQSFIERFNNAMCDDFNTAEAMAVLFE-----L 344
Query: 399 NSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
N LN K++ Q L +LR + N ILGL+
Sbjct: 345 NKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLV 377
>gi|365848422|ref|ZP_09388898.1| cysteine--tRNA ligase [Yokenella regensburgei ATCC 43003]
gi|364570726|gb|EHM48329.1| cysteine--tRNA ligase [Yokenella regensburgei ATCC 43003]
Length = 461
Score = 357 bits (916), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 226/350 (64%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGVVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ + L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVGLVDRMIIEMHKDFDALNILRPDSEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F+V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITERLIERGHAYVADNGDVMFSVPSDPTYGELSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KAGEP+W SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKAGEPAWASPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+ WMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNTWMHSGMVMVDREKMSKSLGNFFTVRDVLKFYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNYS L A A+ +Y L+ + + + AR A D N
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDASAAAAGGEAFEARFIEAMNDDFN 351
>gi|384415761|ref|YP_005625123.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|320016265|gb|ADV99836.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 461
Score = 357 bits (916), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 247/421 (58%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M ++I AYV GDV FAV+ P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GE W+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGESRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ G A PA + F M
Sbjct: 302 LNYSEENLKQARASLERLYTALR------------GTDANATPAGG---AEFEARFRTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + + + + E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKNED--------MAAANGLAAELRKLAQVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|386333865|ref|YP_006030036.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum Po82]
gi|334196315|gb|AEG69500.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum Po82]
Length = 465
Score = 357 bits (916), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 182/383 (47%), Positives = 242/383 (63%), Gaps = 25/383 (6%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+LKIYN++ ++K+ F PI G+V MYVCG+T YD H+GHAR V FD++ R+L +
Sbjct: 3 SLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASAYD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKIIRRA + GE +L++R+ D L P ++PR ++++ Q
Sbjct: 63 VTYVRNITDIDDKIIRRAVENGETIGALTDRFIAAMHEDADALGVQRPDHEPRATEYVPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI ++ N AY +GDV +AV + P YG+LSG+ LE+ RAGERVA + K++P D
Sbjct: 123 MLSMIGKLQANGLAYQAADGDVNYAVRRFPGYGKLSGKSLEDLRAGERVAANDAKQDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK+AKA EP+ W SPWG GRPGWHIECSAMS L + FD+HGGG DL FPHHEN
Sbjct: 183 FVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQ+ A + V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y P +R F++ +H
Sbjct: 243 EIAQAEGANGSTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRFFILRSH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQD--CEVALSP--FQEHGKTARINPAAEDCINKL 369
YRS LNYS LD A A+ +Y L+D E P + HG+
Sbjct: 303 YRSDLNYSDAHLDDARHALTRLYTALKDVPAEAGAQPDWSEPHGQ--------------- 347
Query: 370 RDEFHARMSDDLNTSHILTGAFQ 392
F M+DD NT + F+
Sbjct: 348 --RFREAMNDDFNTPVAMAVLFE 368
>gi|395761809|ref|ZP_10442478.1| cysteinyl-tRNA ligase [Janthinobacterium lividum PAMC 25724]
Length = 465
Score = 357 bits (916), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 178/356 (50%), Positives = 239/356 (67%), Gaps = 9/356 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++K++F P+ GKV MYVCG+T YD H+GHAR ++FD++YR+L+ +V
Sbjct: 4 LKIYNTLAREKQVFVPMEVGKVRMYVCGMTIYDYCHIGHARMMMAFDVIYRWLKASGFDV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + GE L+ R+ + D A L L P + PR ++++ Q+
Sbjct: 64 TYVRNITDIDDKIIRRAVENGETISQLTTRFTRYMDEDTAALGILTPDHTPRATEYVPQM 123
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I Q+ AY +GDV +AV P YG+LSG+ ++ RAGERV V++ KR+P DF
Sbjct: 124 VRLIEQLEAKGLAYQGGDGDVNYAVRNFPGYGKLSGKSPDDLRAGERVDVNTGKRDPLDF 183
Query: 198 ALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWK+AK EP WD+ WG GRPGWHIECSAMS L +FDIHGGG DL FPHHENE
Sbjct: 184 VLWKSAKESEPEEVKWDTKWGRGRPGWHIECSAMSCALLGEQFDIHGGGADLQFPHHENE 243
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A ++V+YW+HNG V +NEKMSKSLGNFFTIR++ +++ +R F++ AHY
Sbjct: 244 IAQSEGAFGHASVNYWIHNGFVRLDNEKMSKSLGNFFTIREVLQKFDAEVIRFFILRAHY 303
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDC---EVALSPFQEHGKTARINPAAEDCIN 367
RSPLNYS + LD A ++ +Y L D E A+ + H AR+ A D N
Sbjct: 304 RSPLNYSDVHLDDARLSLTRLYTALSDVVVEEGAIDWNEAH--AARVAEAMNDDFN 357
>gi|373106799|ref|ZP_09521099.1| cysteine-tRNA ligase [Stomatobaculum longum]
gi|371651738|gb|EHO17164.1| cysteine-tRNA ligase [Stomatobaculum longum]
Length = 469
Score = 357 bits (916), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 190/430 (44%), Positives = 258/430 (60%), Gaps = 28/430 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIY++MT+ KE F I GKV MYVCG T Y+L H+G+AR + FD + RYLE+ EV
Sbjct: 1 MKIYDTMTRYKEEFRTIEPGKVRMYVCGPTVYNLIHIGNARPMIFFDTVRRYLEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V NFTDVDDKII+ AN+ G + +S RY E DMA + P +Y PR ++ + +
Sbjct: 61 NFVSNFTDVDDKIIKAANEEGVDASVISERYIVECKKDMAGMNVRPASYNPRATEEIPGM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNP 194
+MI ++I+ AYV +G V++ VE P+YG+LS + +E N+AG R V + K +P
Sbjct: 121 IEMIQKLIDGGHAYVAADGTVYYRVESFPDYGKLSHKNVEENQAGLRTLKVRGEEAKEDP 180
Query: 195 ADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
DF LWK K GEP W+SPW GRPGWHIECS MS YL DIHGGG DL+FPHHENE
Sbjct: 181 NDFVLWKPKKEGEPYWESPWCEGRPGWHIECSVMSKKYLGETIDIHGGGEDLVFPHHENE 240
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A V YWMHN + +N KMSKSLGNF T+RQI+E Y LR F++SAHY
Sbjct: 241 IAQSEAVSGKKFVRYWMHNAFLNIDNVKMSKSLGNFKTVRQISEEYDLQVLRFFMLSAHY 300
Query: 315 RSPLNYSVLQLDSAS---DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED---CINK 368
RSPLN+S +D A D + + L+DC A K + A E+ +
Sbjct: 301 RSPLNFSREMMDGAKASLDRILTAMEHLRDCLAA-------AKAEALTGAEEEELAAFDA 353
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
LR++F A M DD NT+ ++ F+ M+K+ + S + +++ +
Sbjct: 354 LREKFEAAMDDDFNTADAISVIFE-----------MVKRANITVTEESSKAYITRVKELL 402
Query: 429 KEVLRILGLL 438
++L +LGLL
Sbjct: 403 DKLLDVLGLL 412
>gi|291567546|dbj|BAI89818.1| cysteinyl-tRNA synthetase [Arthrospira platensis NIES-39]
Length = 486
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 194/444 (43%), Positives = 261/444 (58%), Gaps = 16/444 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LKIYN+ T+QKE FT + GKV MY CGVT YD HLGHAR+ ++D++ RYLE
Sbjct: 1 MVLKIYNTQTRQKETFTTLEPGKVKMYCCGVTVYDYCHLGHARSYTTWDVVRRYLEWSGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV+NFTD+DDKI+ RA + +S R+ Y D+ L PRV+DH++
Sbjct: 61 EVNYVQNFTDIDDKILNRAKEHDSTMEEVSQRFIDAYFEDLRRLNVRDANAYPRVTDHIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE--RVAVDS----R 190
+I +I + AY V+GDV+++V P+YG+LS ++LE+ + G RVAV +
Sbjct: 121 EIHQLIDTLTATGHAYAVDGDVYYSVGHFPDYGKLSRRQLEDLQMGASGRVAVADPETLK 180
Query: 191 KRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPH 250
K+NPADFALWKAAK GEP+WDSPWGPGRPGWHIECSAM L DIHGGG DL+FPH
Sbjct: 181 KKNPADFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGGGGDLVFPH 240
Query: 251 HENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER-YHPLALRHFL 309
HENEIAQS AA + YWMHNG VT EKMSKSLGNF TIR++ +R P+ +R F+
Sbjct: 241 HENEIAQSEAATGKTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLDRPVDPMVVRLFI 300
Query: 310 ISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH-GKTARINPAAEDCINK 368
+ HYR PL+++ + SA++ ++TL+D + + G + +P D
Sbjct: 301 LQGHYRKPLDFTDEAIASANNG----WETLKDGLLFAQQYGAPLGWSDDSSPGKYDTTED 356
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
F M DD NT L F+ A K + N+L + Q I ++ K E+
Sbjct: 357 ALQRFRVAMDDDFNTPGGLAVLFELA-KELRRQGNLLAHEGKTDTQSDRIYAIWKTLVEL 415
Query: 429 KEVLRILGLL---PPGAYSEVKTA 449
V + + PP A + A
Sbjct: 416 AGVFGLEAVTQAQPPAATQGISDA 439
>gi|385856089|ref|YP_005902602.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240355]
gi|325205030|gb|ADZ00484.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240355]
Length = 473
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 185/389 (47%), Positives = 236/389 (60%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y
Sbjct: 244 GASGHTCGHNHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDLE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 ---NGYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|153952840|ref|YP_001393605.1| cysteinyl-tRNA synthetase [Clostridium kluyveri DSM 555]
gi|219853505|ref|YP_002470627.1| hypothetical protein CKR_0162 [Clostridium kluyveri NBRC 12016]
gi|187629803|sp|A5N4M6.1|SYC_CLOK5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254765185|sp|B9DY88.1|SYC_CLOK1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146345721|gb|EDK32257.1| CysS [Clostridium kluyveri DSM 555]
gi|219567229|dbj|BAH05213.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 465
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 176/437 (40%), Positives = 264/437 (60%), Gaps = 12/437 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++I+N+MT++KE F P++ G++ MYVCG T Y+ H+G+AR V FD + RY E+ +V
Sbjct: 1 MRIFNTMTRRKEEFVPLIPGEIKMYVCGPTVYNFFHIGNARTFVVFDTVRRYFEYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I++AND L +R+ EY D L T PR + ++ +I
Sbjct: 61 NFVQNFTDIDDKMIKKANDENITVQQLGDRFIDEYYRDADALNIKRATVNPRATLYISKI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I +I+ AY V+GDV+F +K NYG+LSGQ +E ++G R+ +D RK+NP DFA
Sbjct: 121 IEFIQDLIDKGYAYSVDGDVYFNAKKFNNYGKLSGQNIEQLQSGARIDIDERKKNPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K GEPSW+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS
Sbjct: 181 VWKSEKKGEPSWESPWGMGRPGWHIECSCMAYNILGETIDIHAGGSDLKFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
YWMH+ V NN+KMSKSL NFFT R+I ++Y P +R F++S HYR+P+
Sbjct: 241 EGRTGKVFAKYWMHSAFVNINNQKMSKSLNNFFTTREILDKYEPDVIRLFMLSGHYRTPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S+ LDS A+ I ++ + E S + G ++ +N + + +M
Sbjct: 301 NFSIELLDSTKSALDRICNSIINLEELSSKVKNDG-ILDSEIKYKEHLNSYKQRYIEKMD 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ ++ F D ++ IN++++ + + L+LI +E+ LG+L
Sbjct: 360 DDFNTADAISVIF-DLIRDINTNIDENSSMEIIKYSLALI----------RELGSPLGIL 408
Query: 439 PPGAYSEVKTAFLVLLH 455
++T +L+
Sbjct: 409 QKSKRGSIETEVELLIE 425
>gi|372270883|ref|ZP_09506931.1| cysteinyl-tRNA synthetase [Marinobacterium stanieri S30]
Length = 463
Score = 357 bits (915), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 199/422 (47%), Positives = 245/422 (58%), Gaps = 29/422 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T K +FTPI GK+ MYVCGVT YD H+GHAR VSFDL+ RYL +V
Sbjct: 2 LHIYNTLTNSKTVFTPIEPGKIRMYVCGVTVYDYCHIGHARVMVSFDLITRYLRARGWDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + E L+ R D L L P +PR + HM I
Sbjct: 62 DYVRNITDVDDKIIRRAAENDEQVDQLTERMIAAMHEDEERLFVLRPDQEPRATAHMGDI 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++ AY GDV++ VE+ NYGRL+ + +E+ R+G RV V+ K +P DF
Sbjct: 122 IDMVQSLVEKGYAYPASNGDVYYRVERFANYGRLTNKVIEDLRSGARVEVEEAKESPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GE SWDSPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEVSWDSPWGKGRPGWHIECSAMSKCCLGETFDIHGGGPDLPFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V YWMH G V EKMSKSLGNFFTIR + E Y +R+FL S HYRS
Sbjct: 242 SEAANGCTYVHYWMHAGPVRMGTEKMSKSLGNFFTIRDVLEHYDAEVVRYFLSSVHYRSY 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++YS L A A+ YQ LQ ++ A ++ + F A M
Sbjct: 302 IDYSEDGLKEARSALERFYQALQ-------------AAGDLSTAEGGVGSEYEERFFAAM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQ-PKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ + S LN ++Q P + L+L E+K + ++G
Sbjct: 349 DDDFNTPRALAVLFE-----LASELNKAVREQLPIAKPLAL---------ELKRLAGMIG 394
Query: 437 LL 438
LL
Sbjct: 395 LL 396
>gi|45358623|ref|NP_988180.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis S2]
gi|61216204|sp|Q6LYD1.1|SYC_METMP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|45047489|emb|CAF30616.1| Cysteinyl-tRNA synthetase [Methanococcus maripaludis S2]
Length = 476
Score = 357 bits (915), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 172/375 (45%), Positives = 236/375 (62%), Gaps = 2/375 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YN++T+ +E F + +V MYVCG T YD +HLGH R VSFD++ RYLEH+ V
Sbjct: 2 LKVYNTLTRCEEEFKTLNEKEVKMYVCGPTVYDNTHLGHGRTYVSFDIIRRYLEHMGYTV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
V NFTD+DDKII+RA + ++P +S ++ + +L DMA L+ P P+V++H+ +I
Sbjct: 62 NLVINFTDIDDKIIKRAYEKEKDPKEISEQFIKVFLDDMATLKVKPADIYPKVTEHISEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I ++I AY E V+F V+K NYG+LS LE+ +G R+ +K+N DFA
Sbjct: 122 IAFIEKLIEKGFAYKTEDGVYFEVKKFKNYGKLSNINLEDLVSGARIETSEKKKNQKDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP W+SP+G GRPGWHIECSAMS+ YL +FDIHGGG DL FPHHENEIAQS
Sbjct: 182 LWKTAKPGEPKWESPFGSGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V+YW+H G V N EKMSKSLGNF TI I++ Y P LR F I HYRSP+
Sbjct: 242 SAYSGKDWVNYWLHTGFVMVNGEKMSKSLGNFVTIGDISKEYSPEILRFFFIQRHYRSPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP-AAEDCINKLRDEFHARM 377
+Y+ ++ + + IY +++ ++L E +T N D + ++ F+ M
Sbjct: 302 DYTAESMNHVKNNLEKIYNVIENIRISLEK-SEKSRTWDENEFLLYDILKNSKNNFYNAM 360
Query: 378 SDDLNTSHILTGAFQ 392
+ D NT L F+
Sbjct: 361 NSDFNTVKALKSVFE 375
>gi|295094035|emb|CBK83126.1| cysteinyl-tRNA synthetase [Coprococcus sp. ART55/1]
Length = 463
Score = 357 bits (915), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 185/423 (43%), Positives = 258/423 (60%), Gaps = 20/423 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KI N++T++KE F PI GKVG+YVCG T YD H+G+AR + FD L RYLE+ +V
Sbjct: 1 MKILNTLTRRKEEFVPINEGKVGIYVCGPTVYDYIHIGNARPMIVFDTLRRYLEYKGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKII+RAN+ G + +S RY E DMA L T P+ ++ + +
Sbjct: 61 NYVSNFTDVDDKIIKRANEEGVDASVISERYIAEVKKDMAALNVREATTHPKATEEIPDM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPA 195
+M+ +I AY V G V+F K +YG+LS + +++ R+G R V+ K +P
Sbjct: 121 IEMVKTLIEKGYAYEVNGTVYFRTRKFKDYGKLSKKNIDDLRSGNRDLLVSGVDEKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK K GEPSW SPWG GRPGWH+ECS MS Y+ DIH GG DL+FPHHENEI
Sbjct: 181 DFVLWKPKKEGEPSWPSPWGDGRPGWHLECSVMSKKYIGDVIDIHAGGEDLVFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA YWMHNG + NNEKMSKSLGNFFT+R+I E+Y +R F++SAHYR
Sbjct: 241 AQSEAANGTEFARYWMHNGFLKINNEKMSKSLGNFFTVREIAEKYPLQVIRFFMLSAHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPLN+S ++++ + + I T D ++S G ++ A D ++ ++ A
Sbjct: 301 SPLNFSADLVEASKNGLERIL-TAVDRLKSIS-----GTEGEVDKAVADEMDAFVKKYEA 354
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DDLNT+ ++ F+ +K+ N +N+ ++ +L L N V ++ IL
Sbjct: 355 AMDDDLNTADAISVIFE-LVKYAN--VNVTEESTKATVELVL--------NTVTKLCDIL 403
Query: 436 GLL 438
G++
Sbjct: 404 GII 406
>gi|256823180|ref|YP_003147143.1| cysteinyl-tRNA synthetase [Kangiella koreensis DSM 16069]
gi|256796719|gb|ACV27375.1| cysteinyl-tRNA synthetase [Kangiella koreensis DSM 16069]
Length = 465
Score = 357 bits (915), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 191/435 (43%), Positives = 255/435 (58%), Gaps = 31/435 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++T+QKE F P+ GKV MYVCGVT YDL H+GHAR +FD++ R+L+ +V
Sbjct: 2 LQIYNNLTRQKEPFKPMEEGKVSMYVCGVTTYDLCHIGHARTYAAFDVINRFLKFSGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RAN+ GE+ L+ R+ QE D + P +PR + M++I
Sbjct: 62 TYVRNITDIDDKIINRANENGEDFSELTERFIQEMYQDFDAIGLQRPDIEPRATQTMDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M +I AY + GDV+F V +YG+LS Q L AGERV V+ K++P DF
Sbjct: 122 IQMTQTLIEKGAAYATDNGDVYFHVPAFKDYGKLSKQDLTQLNAGERVDVNDIKKDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK++K GEPSWDSPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 ALWKSSKPGEPSWDSPWGKGRPGWHIECSAMSKKCLGDTFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + W+H G V + EKMSKSLGNFFTIR + ++Y P ++R+FL+S HYRS
Sbjct: 242 SECANDCTFARVWIHTGMVQVDKEKMSKSLGNFFTIRDVLKQYRPESVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD---EFH 374
L+Y+ L+SA ++ +Y +L+ + N A +D + L F
Sbjct: 302 LSYTQANLESADASLERLYTSLRGVD--------------FNRATDDKLGILEQAQLRFT 347
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD N + F + +N LK + + I ++KE+ +
Sbjct: 348 EAMDDDFNVPEAMPVLFD-----LAKEVNRLKATD--------MATAATIAVKIKELAGV 394
Query: 435 LGLLPPGAYSEVKTA 449
L LL S +K+
Sbjct: 395 LSLLQQDPESFLKSG 409
>gi|258544752|ref|ZP_05704986.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
gi|258520023|gb|EEV88882.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
Length = 473
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 168/323 (52%), Positives = 218/323 (67%), Gaps = 1/323 (0%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
L+ YNS+T+QKE F P GK+GMYVCG+T YD H+GHAR V FD + R+L
Sbjct: 23 ALQFYNSLTRQKEAFIPREPGKIGMYVCGMTVYDYCHIGHARVMVVFDTIARHLRASGYA 82
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
+ YVRN TD+DDKII RA++ GE +L+ R+ D A L C P +PR + +
Sbjct: 83 LKYVRNITDIDDKIIARAHENGEPIDALTARFITAMHEDEAALGCQRPDVEPRATAAVSG 142
Query: 138 IKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ +++ +I AY + GDV++AV P YG+L+ + L++ RAGER+AV+ K++P D
Sbjct: 143 MIELVQTLIAKGHAYAADNGDVYYAVRSFPAYGKLANRSLDDLRAGERIAVNEAKKDPLD 202
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GEP+WDSPWG GRPGWHIECS M A L FDIHGGG+DL FPHHE EIA
Sbjct: 203 FVLWKAAKPGEPAWDSPWGKGRPGWHIECSVMGAETLGEHFDIHGGGMDLKFPHHECEIA 262
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AC +V+YW+HNG V +NEKMSKSLGNFFT+R + ++Y LR F++S+HYR
Sbjct: 263 QSEGACGHPHVNYWIHNGFVQIDNEKMSKSLGNFFTVRDVLKKYDGETLRAFILSSHYRG 322
Query: 317 PLNYSVLQLDSASDAVFYIYQTL 339
PLNYS LD A A+ +Y L
Sbjct: 323 PLNYSDAALDEAKKALTRLYSAL 345
>gi|406941020|gb|EKD73620.1| cysteinyl-tRNA synthetase, partial [uncultured bacterium]
Length = 322
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 169/319 (52%), Positives = 216/319 (67%), Gaps = 1/319 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+TQQKE+F PI G+V MY+CGVT YD HLGHAR ++FD++ RYL +V
Sbjct: 2 LKIYNSLTQQKEVFQPITPGQVNMYICGVTVYDYCHLGHARCYIAFDVVVRYLRACGYKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RAND E L+ RY Q D L L P Y+PR +D++ +
Sbjct: 62 TYVRNITDIDDKIIKRANDTHEEITVLTQRYIQAMQEDFHALGLLIPDYEPRATDYIAVM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ +I +++ N AY+ GDV++ V + YG LS + ++ +G RV + KR+P DF
Sbjct: 122 QILIEKLLANGYAYIASNGDVYYEVRRFSRYGCLSHRDIDKLESGARVEIADAKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP+WDSPWG GRPGWH+ECSAMS L FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 VLWKLAKPHEPAWDSPWGMGRPGWHLECSAMSMQLLGECFDIHGGGKDLVFPHHENELAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A Q + V WMH GH+ EKMSKSLGNFFTIR + +Y P +R+F IS+HYRSP
Sbjct: 242 SEGATQATFVKTWMHAGHLQIAKEKMSKSLGNFFTIRDVLAQYAPEVVRYFFISSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIY 336
L YS L A +++ +Y
Sbjct: 302 LQYSAELLQQAKNSLERLY 320
>gi|307131980|ref|YP_003883996.1| cysteinyl-tRNA synthetase [Dickeya dadantii 3937]
gi|306529509|gb|ADM99439.1| cysteinyl-tRNA synthetase [Dickeya dadantii 3937]
Length = 461
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 176/350 (50%), Positives = 225/350 (64%), Gaps = 1/350 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L +V
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE L++R E D L P +PR + ++ +I
Sbjct: 62 KYVRNITDIDDKIIKRATENGETITQLTDRMIGEMHTDFDALNIQRPDEEPRATHYIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q+I AYV GDV F+V+ +P YG LS Q LE +AG RV + KRNP DF
Sbjct: 122 IELVEQLIARRHAYVANNGDVMFSVDTAPGYGALSRQDLEQLKAGARVEITEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KAGEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKAGEPSWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH G V + EKMSKSL NFFT+R + Y +R+FLIS HYRS
Sbjct: 242 STCAHGGEYVNYWMHTGMVMVDREKMSKSLNNFFTMRDVLMHYDAETIRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
LNY+ L A ++ +Y L+ + A S +R A +D N
Sbjct: 302 LNYTEENLKQARASLERLYTALRGTDAAASAAGGDAFESRFRDAMDDDFN 351
>gi|187928101|ref|YP_001898588.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12J]
gi|229558781|sp|B2U9P8.1|SYC_RALPJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187724991|gb|ACD26156.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12J]
Length = 463
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 182/383 (47%), Positives = 239/383 (62%), Gaps = 25/383 (6%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+LKIYN++ ++K+ F PI G+V MYVCG+T YD H+GHAR V FD++ R+L +
Sbjct: 3 SLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAAGYD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKII+RA + GE +L+ R+ D L P ++PR ++++ Q
Sbjct: 63 VTYVRNITDIDDKIIKRAVENGETMSALTGRFIAAMHEDADALGVQRPDHEPRATEYVPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI ++ N AY +GDV +AV K P YG+LSG+ LE+ RAGERVA + K++P D
Sbjct: 123 MLSMIGRLQTNGLAYQATDGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDAKQDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK+AKA EP+ W SPWG GRPGWHIECSAMS L FD+HGGG DL FPHHEN
Sbjct: 183 FVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCELLGEHFDLHGGGADLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A + V+ WMHNG V N+EKMSKSLGNFFTIR + + Y +R F++ +H
Sbjct: 243 EIAQSEGATGKTFVNMWMHNGFVRVNDEKMSKSLGNFFTIRDVLKVYDAEVVRFFILRSH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSP----FQEHGKTARINPAAEDCINKL 369
YRS LNYS LD A A+ +Y L+D A+ + HGK
Sbjct: 303 YRSDLNYSDAHLDDARHALTRLYTALKDVPAAVGAKPDWSESHGK--------------- 347
Query: 370 RDEFHARMSDDLNTSHILTGAFQ 392
F M+DD NT ++ F+
Sbjct: 348 --RFLEAMNDDFNTPVAVSVLFE 368
>gi|194289323|ref|YP_002005230.1| cysteinyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
gi|229558628|sp|B3R4D1.1|SYC_CUPTR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|193223158|emb|CAQ69163.1| cysteine tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
Length = 462
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/410 (47%), Positives = 249/410 (60%), Gaps = 27/410 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++ ++K+ F PI GKV MYVCG+T YD H+GHAR V FD+++R+L EV
Sbjct: 4 LNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+N TD+DDKIIRRA + GE L+ R+ Q D A L + P ++PR +D++ Q+
Sbjct: 64 TYVQNITDIDDKIIRRAVENGETIGELTTRFIQYMHEDAAALGVIRPDHEPRATDYVPQM 123
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DMI ++ AY +GDV ++V K YG+LSG+ LE+ RAGERV+ + K++P DF
Sbjct: 124 LDMIGKLEAKGLAYQASDGDVNYSVRKFDGYGKLSGKSLEDLRAGERVSANDAKQDPLDF 183
Query: 198 ALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWK+AKA EP WDS WG GRPGWHIECSAMS L FDIHGGG DL FPHHENE
Sbjct: 184 VLWKSAKASEPPESKWDSKWGAGRPGWHIECSAMSCALLGEHFDIHGGGADLQFPHHENE 243
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y +R F++ AHY
Sbjct: 244 IAQSEGASGKPFVNLWMHNGFVRINDEKMSKSLGNFFTIREVLKAYDAEVVRFFILRAHY 303
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCE---VALSPFQEHGKTARINPAAEDCINKLRD 371
RSPLNYS LD A A+ +Y L+D + A+ + H K
Sbjct: 304 RSPLNYSDAHLDDARHALTRLYTALKDSQPGGCAVDWDEPHAK----------------- 346
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK--QQQLSLIE 419
F M DD NT ++ F D IN + + +Q K L L+E
Sbjct: 347 RFAEAMGDDFNTPIAMSVLF-DLASEINRTGSTAAARQLKGLAGTLGLLE 395
>gi|317131764|ref|YP_004091078.1| cysteinyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
gi|315469743|gb|ADU26347.1| cysteinyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
Length = 465
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 177/386 (45%), Positives = 247/386 (63%), Gaps = 8/386 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+KIYN++T++K+ F PI G+ +Y CG T Y+ H+G+AR V FD+L RYLE+
Sbjct: 1 MTMKIYNTLTREKDEFVPIKPGEARIYACGPTVYNYIHVGNARPMVVFDILRRYLEYRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V + +NFTDVDDK+IRRAN+ G ++ +Y Y D A L T+ PR ++++
Sbjct: 61 KVLFAQNFTDVDDKMIRRANEEGVAVAEVAEKYIAAYREDAAGLHVREATFHPRATENIA 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I +I + AY +GDV+F YG+LS Q LE+ AG RV V RK +P D
Sbjct: 121 DILALIRTLEQKGYAYASDGDVYFRAHAFKEYGKLSHQPLEDLEAGARVDVSERKEDPVD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GEPSWDSPWGPGRPGWHIECSAM+ H+L DIH GG DLIFPHHENEIA
Sbjct: 181 FALWKAAKPGEPSWDSPWGPGRPGWHIECSAMARHFLGQTIDIHCGGQDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A YWMHNG++ +N KMSKSLGNFFT+R++ +Y +R ++SA YR+
Sbjct: 241 QSECANDAPFAHYWMHNGYINIDNRKMSKSLGNFFTVREVAAKYGYEPIRFLMLSAQYRT 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S ++ + A+ +Y+ + + AL ++ G+T PA ++ +++F A
Sbjct: 301 PINFSDEIMEQSVAALDRLYRCREALKDAL---RQAGET----PADSAAVSAWQEKFDAA 353
Query: 377 MSDDLNTSHILTGAFQDALKFINSSL 402
M DDLNT+ L F+ +K IN+ +
Sbjct: 354 MDDDLNTADALAVLFE-LVKEINTRV 378
>gi|424798492|ref|ZP_18224034.1| Cysteinyl-tRNA synthetase [Cronobacter sakazakii 696]
gi|423234213|emb|CCK05904.1| Cysteinyl-tRNA synthetase [Cronobacter sakazakii 696]
Length = 325
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 171/310 (55%), Positives = 216/310 (69%), Gaps = 6/310 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+M++QKE F PI G+VGMYVCG+T YDL H+GH R ++FD++ RYL L ++
Sbjct: 2 LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVAEMHKDFDALNILRPDSEPRATQHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q+I AYV GDV FAVE +YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRSP
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSP 301
Query: 318 L-----NYSV 322
+ NYS+
Sbjct: 302 IKSVATNYSL 311
>gi|323526548|ref|YP_004228701.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1001]
gi|323383550|gb|ADX55641.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1001]
Length = 465
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 197/435 (45%), Positives = 258/435 (59%), Gaps = 29/435 (6%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L+IYN++ + K+ F P+ G V MYVCG+T YD H+GHAR V FD++ R+L L E
Sbjct: 3 SLRIYNTLARDKQTFVPLQAGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGYE 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKIIRRA + GE SL++R+ D L P +PR +D + Q
Sbjct: 63 VTYVRNITDIDDKIIRRAVENGETIKSLTDRFIAALHEDADALGIARPDIEPRATDFIPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI + N AY +GDV +AV K YG+LSG+ LE+ RAGERVA + K +P D
Sbjct: 123 MLGMIETLEANGYAYQAKDGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAANDAKEDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK +KAGEP+ WDS +G GRPGWHIECSAM L FDIHGGG DL FPHHEN
Sbjct: 183 FVLWKRSKAGEPADTGWDSKYGRGRPGWHIECSAMGCSLLGEHFDIHGGGQDLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS AA V+YWMHNG+V +NEKMSKSL NFFTIR++ +Y +R F+ AH
Sbjct: 243 EIAQSEAATGQPFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLAQYDAEVVRFFIARAH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSPLNYS + +D A +A+ +Y L D ++P + AA D F
Sbjct: 303 YRSPLNYSDVHIDDARNALGRLYTALTD----VAP----------DGAALDWNEAHAQRF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
A M+DD NT ++ F+ + + +N + +Q SL L + E + L+
Sbjct: 349 QAAMNDDFNTPVAVSVLFE-----LATEVNRTRDPALARQLRSLGAVLGLLGREPRAYLQ 403
Query: 434 ------ILGLLPPGA 442
+ G L P A
Sbjct: 404 QAAGAAVEGALEPAA 418
>gi|241662706|ref|YP_002981066.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12D]
gi|240864733|gb|ACS62394.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12D]
Length = 463
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 183/383 (47%), Positives = 238/383 (62%), Gaps = 25/383 (6%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+LKIYN++ ++K+ F PI G+V MYVCG+T YD H+GHAR V FD++ R+L +
Sbjct: 3 SLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAAGYD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKII+RA + GE +L+ R+ D L P Y+PR ++++ Q
Sbjct: 63 VTYVRNITDIDDKIIKRAVENGETMSALTGRFIAAMHEDADALGVQRPDYEPRATEYVPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI ++ N AY +GDV +AV K P YG+LSG+ LE+ RAGERVA + K++P D
Sbjct: 123 MLGMIGKLQTNGLAYQATDGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDAKQDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK+AKA EP+ W SPWG GRPGWHIECSAMS L FD+HGGG DL FPHHEN
Sbjct: 183 FVLWKSAKAEEPAESRWASPWGEGRPGWHIECSAMSCELLGEHFDLHGGGADLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A + V+ WMHNG V N+EKMSKSLGNFFTIR + + Y +R F++ +H
Sbjct: 243 EIAQSEGATGKTFVNTWMHNGFVRVNDEKMSKSLGNFFTIRDVLKVYDAEVVRFFILRSH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPF----QEHGKTARINPAAEDCINKL 369
YRS LNYS LD A A+ +Y L+D A + HGK
Sbjct: 303 YRSDLNYSDAHLDDARHALTRLYTALKDVPAAAGAKPDWNESHGK--------------- 347
Query: 370 RDEFHARMSDDLNTSHILTGAFQ 392
F M+DD NT ++ F+
Sbjct: 348 --RFLEAMNDDFNTPVAVSVLFE 368
>gi|421080284|ref|ZP_15541218.1| Cysteine--tRNA ligase [Pectobacterium wasabiae CFBP 3304]
gi|401705137|gb|EJS95326.1| Cysteine--tRNA ligase [Pectobacterium wasabiae CFBP 3304]
Length = 461
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 194/425 (45%), Positives = 250/425 (58%), Gaps = 37/425 (8%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE L+ R E D L + P +PR + H+ I
Sbjct: 62 KYVRNVTDIDDKIIKRAIENGETSDQLTTRMIAEMHADFDALNIVRPDAEPRATHHIADI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ +I AYV GDV F+V+ +P YG LS Q L+ +AG RV + + KRNP DF
Sbjct: 122 IEMVETLIARRHAYVASNGDVMFSVDTAPGYGALSRQDLDQLQAGARVEITAVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS
Sbjct: 242 SRCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR- 376
LNYS L A ++ +Y L+ ++ ++ HG DEF AR
Sbjct: 302 LNYSEDNLKQARASLERLYIALRGTDLNVAA---HGG----------------DEFEARF 342
Query: 377 ---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT + F A +N L K + Q L +LRK+
Sbjct: 343 REAMDDDFNTPEAYSVLFDMA-----REVNRL-KAEDVQAANQLASALRKLSG------- 389
Query: 434 ILGLL 438
+LGLL
Sbjct: 390 VLGLL 394
>gi|225024891|ref|ZP_03714083.1| hypothetical protein EIKCOROL_01779 [Eikenella corrodens ATCC
23834]
gi|224942349|gb|EEG23558.1| hypothetical protein EIKCOROL_01779 [Eikenella corrodens ATCC
23834]
Length = 473
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 188/389 (48%), Positives = 238/389 (61%), Gaps = 30/389 (7%)
Query: 21 IYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDVEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIEALIRNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSDKLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR + ++Y P
Sbjct: 244 GASGHVCGHEHAHTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRDVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A +A+ +Y TL + V FQ + A
Sbjct: 304 IVRFFILRAHYRSPLNYSDAHLDDAKNALTRLYNTLAN--VPPVEFQ-------VASEAN 354
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQ 392
D + F A M+DD +T + F+
Sbjct: 355 DYTRR----FFAAMNDDFDTVQAVAVLFE 379
>gi|423565552|ref|ZP_17541828.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-A1]
gi|401193754|gb|EJR00757.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-A1]
Length = 465
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 173/381 (45%), Positives = 242/381 (63%), Gaps = 9/381 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFVPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ +++NR+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIANRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + + I K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLVE------IEKFQTAF 354
Query: 374 HARMSDDLNTSHILTGAFQDA 394
M+DD NT++ +T + A
Sbjct: 355 EEAMNDDFNTANAITELYNVA 375
>gi|170699316|ref|ZP_02890365.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
gi|170135808|gb|EDT04087.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
Length = 465
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 189/402 (47%), Positives = 249/402 (61%), Gaps = 25/402 (6%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L+IYN++ + K++F P G+V MYVCG+T YD H+GHAR V FDL+ R+L +
Sbjct: 3 SLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGYR 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKIIRRA + GE SL++R+ D A L P +PR + + Q
Sbjct: 63 VTYVRNITDIDDKIIRRALENGETIKSLTDRFIGAMHEDEAALGIQRPDIEPRATQFIPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI ++ N AY +GDV ++V K NYG+LSG+ L++ RAGERVA + K +P D
Sbjct: 123 MLGMIEKLETNGYAYQAADGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDAKEDPLD 182
Query: 197 FALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK AKA +P SW S +G GRPGWHIECSAM L FDIHGGG DL FPHHEN
Sbjct: 183 FVLWKRAKADDPQGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A + V+YWMHNG V +NEKMSKSLGNFFTIR++ ERY +R F++ H
Sbjct: 243 EIAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRFFIVRTH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCE---VALSPFQEHGKTARINPAAEDCINKLR 370
YRSPLNYS + LD A ++ +Y L+D E +AL + H +
Sbjct: 303 YRSPLNYSDVHLDDARASLTRLYTALKDVEPDALALDWNEPHAQ---------------- 346
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 412
F A M+DD+NT + F+ A + +N + + +Q KQ
Sbjct: 347 -RFAAAMNDDINTPVAVATLFELAGE-VNRTRDASLARQLKQ 386
>gi|326790451|ref|YP_004308272.1| cysteinyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
gi|326541215|gb|ADZ83074.1| cysteinyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
Length = 472
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 183/422 (43%), Positives = 262/422 (62%), Gaps = 17/422 (4%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN++T++KE F PI KV MYVCG T Y+L H+G+AR + FD + RY E + EV
Sbjct: 2 IKIYNTLTKRKEEFKPIEPHKVRMYVCGPTVYNLIHIGNARPYIVFDTVRRYFESVGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTDVDDKII++AN+ G + + +Y +E L D+ +L P T+ PRV++ M++I
Sbjct: 62 NYVQNFTDVDDKIIKKANEEGRSTNEVVTQYIEETLKDVNNLNVTPATHHPRVTEEMDRI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPAD 196
+MI ++I AY + G V+F YG+LS + LE AG ERVA+ K+N D
Sbjct: 122 IEMIKELIEKGYAYEINGTVYFDTAAFEQYGKLSKKVLEELEAGRSERVALTEEKKNHMD 181
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK K GEP W+SPW GRPGWHIECSAM+ YL DIH GG DL+FPHHENEIA
Sbjct: 182 FVLWKPKKEGEPYWESPWSNGRPGWHIECSAMAKRYLGDTIDIHAGGEDLVFPHHENEIA 241
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A YWMHN + +N+KMSKSLGNF T+R + E Y +R F+++AHYRS
Sbjct: 242 QSECANGKEFAHYWMHNAFLNIDNKKMSKSLGNFKTLRDVGEMYGYDVVRFFMLNAHYRS 301
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD---EF 373
PLN+S ++SA +++ + +++ + LS EH + A + + + +L D F
Sbjct: 302 PLNFSAELIESAKNSL----ERIKNAKATLSFALEHSQIADLTEEEKALLKELDDFKARF 357
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
H M DD NT+ ++ F+ +KF N+ K+ Q +E++ K+ NE+ ++L
Sbjct: 358 HEHMEDDFNTADAISIIFE-LVKFANTY-----AKEGASQ--PFVEAVLKLFNELTDILG 409
Query: 434 IL 435
++
Sbjct: 410 LI 411
>gi|94499488|ref|ZP_01306025.1| cysteinyl-tRNA synthetase [Bermanella marisrubri]
gi|94428242|gb|EAT13215.1| cysteinyl-tRNA synthetase [Oceanobacter sp. RED65]
Length = 460
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 176/376 (46%), Positives = 229/376 (60%), Gaps = 12/376 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L+IYN++++QKE F P+ GK+GMYVCG+T YD H+GHAR VSFD++ RYL H
Sbjct: 1 MALQIYNTLSRQKEEFKPLQPGKIGMYVCGMTVYDFCHMGHARVMVSFDVIVRYLRHKGF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V Y+RN TD+DDKII+RA + GE L +R D A L L P +PR + H++
Sbjct: 61 DVNYIRNITDIDDKIIQRAAENGEPFEQLVDRMVDAMNEDFAKLNILTPNSEPRATQHID 120
Query: 137 QIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
I M+ +I AY + GDV++ V K YG+LSG+ LE +G R+AV+ K +P
Sbjct: 121 GIIKMVETLIEKGFAYAAKNGDVYYRVRKFDGYGKLSGKILEELESGARIAVEEEKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK+AK EPSWDSPWG GRPGWHIECS MS L + FDIHGGG DL FPHHENEI
Sbjct: 181 DFVLWKSAKPEEPSWDSPWGQGRPGWHIECSVMSTCCLGNNFDIHGGGPDLKFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA + + WMH G + + EKMSKSLGNFFTIR I E+Y +R FL S YR
Sbjct: 241 AQSEAATGEHYANTWMHAGALRIDGEKMSKSLGNFFTIRDILEKYDAEVIRFFLSSVQYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
S +NYS L A + +Y + C+++ + + + R+ F A
Sbjct: 301 SAINYSEDGLKDAEAKLDRLYNAIHGCDLSA-----------VIDEQDAVVQDTRERFEA 349
Query: 376 RMSDDLNTSHILTGAF 391
M DD NT + F
Sbjct: 350 AMDDDFNTPKAIAVLF 365
>gi|317051773|ref|YP_004112889.1| cysteinyl-tRNA synthetase [Desulfurispirillum indicum S5]
gi|316946857|gb|ADU66333.1| cysteinyl-tRNA synthetase [Desulfurispirillum indicum S5]
Length = 465
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 175/374 (46%), Positives = 241/374 (64%), Gaps = 8/374 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN+ + KE F PI GK +YVCGVT YD H+GHAR+AV+FD + RYL + EV
Sbjct: 2 IRLYNTQSSSKEDFIPIEPGKARIYVCGVTTYDHCHIGHARSAVAFDSIRRYLSYRGFEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+N+TD+DDKII RA + GE +L+ R+ E+ DMA L LPPT PR ++H+ ++
Sbjct: 62 TFVKNYTDIDDKIINRARENGEEWKALAERFISEHDRDMAALYVLPPTIAPRATEHLPEM 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++++N AY D+FF V + YG+LS + LE+ ++G RV V+ K NP DF
Sbjct: 122 IALIEKLLDNGYAYKGGDDIFFRVHRFTEYGKLSHKALEDLQSGSRVEVNPLKENPLDFV 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GEPSW++ +G GRPGWHIECSAM +L FDIHGGG DLIFPHHENEIAQS
Sbjct: 182 LWKGKKEGEPSWEASFGAGRPGWHIECSAMGHKHLGRVFDIHGGGKDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YW+HNG V NNEKMSKSLGNFFTI++I + Y P LR FL HYRSP+
Sbjct: 242 QAGYGCAPARYWIHNGFVNINNEKMSKSLGNFFTIKEILQHYDPEVLRLFLAQTHYRSPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++ + A A+ +Y+ L++ F+ H T R + + ++ + +F M
Sbjct: 302 DFCEENMTMARQALEKLYRFLEN-------FENHEDT-RTSDSIAPVLSDITRKFEEAMD 353
Query: 379 DDLNTSHILTGAFQ 392
DD N++ L F+
Sbjct: 354 DDFNSALALASLFE 367
>gi|417850906|ref|ZP_12496721.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
str. Anand1_poultry]
gi|338220217|gb|EGP05763.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
str. Anand1_poultry]
Length = 459
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 193/435 (44%), Positives = 256/435 (58%), Gaps = 35/435 (8%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCG+T YDL H+GH R V FD++ RYL +L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L + E D L L P +PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENNETCNQLVEKMIAEMHKDFDALNVLRPDVEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I AYV GDV F VE YG+LS Q LE +AG RV + + K+NP DF
Sbjct: 122 IAMIEKLIARQHAYVSANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIVNVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWSSPWGEGRPGWHIECSAMNHKELGEHFDIHGGGSDLTFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFT+R++ Y ++R+FL++AHYRS
Sbjct: 242 SCCAHSGRYVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSLYDAESVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC------------ 365
LNYS L+ A A+ +Y L+ + + A A +D
Sbjct: 302 LNYSEENLNLAHSALERLYTALRGTDPTAVATEGQNYLAAFREAMDDDFNTPKAISVLFE 361
Query: 366 ----INKLRDE-------FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 414
INKL++E AR+ + + IL +QD +F+ S +
Sbjct: 362 IAREINKLKNEDILKANALAARLRE---LAGILGLLYQDPEQFLQSG--------SDNDE 410
Query: 415 LSLIESLRKIENEVK 429
++LIE+L K N+ +
Sbjct: 411 VALIEALIKQRNDAR 425
>gi|145630616|ref|ZP_01786395.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R3021]
gi|144983742|gb|EDJ91192.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R3021]
Length = 369
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 174/347 (50%), Positives = 226/347 (65%), Gaps = 1/347 (0%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDTLNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q L +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLGQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED 364
LNYS L+ A A+ +Y L+ + + F A +D
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVVFGGENFVETFREAMDD 348
>gi|299067219|emb|CBJ38416.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Ralstonia
solanacearum CMR15]
Length = 465
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 185/383 (48%), Positives = 240/383 (62%), Gaps = 25/383 (6%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+LKIYN++ ++K+ F PI G+V MYVCG+T YD H+GHAR V FD++ R+L +
Sbjct: 3 SLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASGYD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKII+RA + GE +L+NR+ D L P +PR ++++ Q
Sbjct: 63 VTYVRNITDIDDKIIKRAVENGETIGTLTNRFIAAMHEDADALGVQRPDREPRATEYVPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI ++ +N AY +GDV +AV K P YG+LSG+ LE+ RAGERVA + K++P D
Sbjct: 123 MLSMIGKLQHNGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDAKQDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK+AKA EP+ W SPWG GRPGWHIECSAMS L + FD+HGGG DL FPHHEN
Sbjct: 183 FVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCELLGAHFDLHGGGADLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A + V+ WMHNG V N+EKMSKSLGNFFTIR + + Y P +R F++ +H
Sbjct: 243 EIAQSEGANGSTFVNTWMHNGFVRVNDEKMSKSLGNFFTIRDVLKVYDPEVVRFFILRSH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQD--CEVALSP--FQEHGKTARINPAAEDCINKL 369
YRS LNYS LD A A+ +Y L+D E P + HGK
Sbjct: 303 YRSDLNYSDAHLDDARHALTRLYTALKDVPAEAQARPDWNEPHGK--------------- 347
Query: 370 RDEFHARMSDDLNTSHILTGAFQ 392
F M DD NT + F+
Sbjct: 348 --RFREAMHDDFNTPVAMAVLFE 368
>gi|307243392|ref|ZP_07525549.1| cysteine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
gi|306493202|gb|EFM65198.1| cysteine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
Length = 467
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/411 (43%), Positives = 248/411 (60%), Gaps = 8/411 (1%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN+MT++KE F P+ GKV MYVCG T Y+ HLG+AR FD L RY E+ EV
Sbjct: 1 MKIYNTMTRKKEEFIPLEEGKVKMYVCGPTVYNFIHLGNARPFTVFDTLRRYFEYRGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY++NFTDVDDKII+R+++ G +P ++ +Y +EY +D L T P+V+D+++ I
Sbjct: 61 TYIQNFTDVDDKIIKRSHEEGISPEEVAEKYIKEYFIDCDGLGIKRATVHPQVTDNIDNI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +I+ AY GDV F K YG+LS Q +E G R+ VD +K +P DF
Sbjct: 121 IVFVQDLIDKGYAYEAGGDVLFRTRKFKEYGKLSHQNIEELELGARIDVDDKKEDPLDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP W SPWG GRPGWHIECS MS YL + DIH GG DL FPHHENEIAQS
Sbjct: 181 LWKAKKEGEPGWQSPWGEGRPGWHIECSVMSNRYLGNTIDIHAGGQDLQFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+ YWMHNG++ + EKMSKSLGNFFT+R I+ +Y +R FL++ YR+P+
Sbjct: 241 ECRNGHTFARYWMHNGYINVDGEKMSKSLGNFFTVRDISNKYDLGLVRFFLLATQYRNPV 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI---NKLRDEFHA 375
N+S L+ A + + + E L + + + +D + +K R+ F
Sbjct: 301 NFSDTVLEQAKAGLERLTNARDNAEFILGNLAD----SSLRDEEKDMVAGLDKYRERFIE 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 426
M DDLNT+ ++ F+ A KF+N++++ K+ Q L + L + N
Sbjct: 357 AMDDDLNTADAISVIFELA-KFMNTNISDQSSKEFVQLNLDIFNELTGVLN 406
>gi|425065810|ref|ZP_18468930.1| Cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
P1059]
gi|404383305|gb|EJZ79759.1| Cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
P1059]
Length = 459
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 193/435 (44%), Positives = 256/435 (58%), Gaps = 35/435 (8%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCG+T YDL H+GH R V FD++ RYL +L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L + E D L L P +PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENNETCNQLVEKMIAEMHKDFDALNVLRPDVEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I AYV GDV F VE YG+LS Q LE +AG RV + + K+NP DF
Sbjct: 122 IAMIEKLIARQHAYVSANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIVNVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWSSPWGEGRPGWHIECSAMNHKELGEHFDIHGGGSDLTFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFT+R++ Y ++R+FL++AHYRS
Sbjct: 242 SCCAHSGRYVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSLYDAESVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC------------ 365
LNYS L+ A A+ +Y L+ + + A A +D
Sbjct: 302 LNYSEENLNLAHSALERLYTALRGTDPTAVATEGQNYLAAFREAMDDDFNTPKAISVLFE 361
Query: 366 ----INKLRDE-------FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 414
INKL++E AR+ + + IL +QD +F+ S +
Sbjct: 362 IAREINKLKNEDILKANALAARLRE---LAGILGLLYQDPEQFLQSG--------SDNDE 410
Query: 415 LSLIESLRKIENEVK 429
++LIE+L K N+ +
Sbjct: 411 VALIEALIKQRNDAR 425
>gi|428218169|ref|YP_007102634.1| cysteinyl-tRNA synthetase [Pseudanabaena sp. PCC 7367]
gi|427989951|gb|AFY70206.1| cysteinyl-tRNA synthetase [Pseudanabaena sp. PCC 7367]
Length = 485
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 176/379 (46%), Positives = 241/379 (63%), Gaps = 7/379 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++ ++YNS+T+QKE + G++ MYVCGVT YD HLGHARA V +D++ RYL+
Sbjct: 1 MSQQVYNSLTRQKEELQTLEPGQIKMYVCGVTVYDFCHLGHARAYVVWDMVRRYLQSRNY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV+N TD+DDKI++RA G +S+RY Y DMA L +P PR ++ +E
Sbjct: 61 QVRYVQNITDIDDKILKRAQQEGVTMQEISDRYIATYNEDMARLNIMPADEYPRATESIE 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE--RVAV-DSRKRN 193
I D+I + D AY GDV++AV+K P YG+LSG++L + +AG RVAV + KR
Sbjct: 121 AIIDLIKALEAQDYAYAAGGDVYYAVQKFPTYGKLSGRKLADMQAGASGRVAVGEELKRY 180
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
P DFALWKAAK GEP W SPWG GRPGWHIECSAM L + DIH GG DL FPHHEN
Sbjct: 181 PFDFALWKAAKPGEPFWQSPWGEGRPGWHIECSAMVRSRLGDQIDIHAGGADLQFPHHEN 240
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A YW+HNG V + EKMSKSLGNF TIR++ + Y P+A+R F++ +H
Sbjct: 241 EIAQSEGATHQPLARYWLHNGFVNIDGEKMSKSLGNFTTIRELLKHYDPMAIRLFILQSH 300
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YR P++++ +++A+ ++T++D + F + R+ A + L D F
Sbjct: 301 YRQPIDFTEEAINAATRG----WETIRDGLLFKHDFGDQLGWDRLAVALDQLDQNLLDRF 356
Query: 374 HARMSDDLNTSHILTGAFQ 392
H M DD NTS ++ F+
Sbjct: 357 HGAMDDDFNTSIAISLLFE 375
>gi|409992104|ref|ZP_11275315.1| cysteinyl-tRNA ligase [Arthrospira platensis str. Paraca]
gi|409937048|gb|EKN78501.1| cysteinyl-tRNA ligase [Arthrospira platensis str. Paraca]
Length = 486
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 194/444 (43%), Positives = 260/444 (58%), Gaps = 16/444 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LKIYN+ T+QKE FT + GKV MY CGVT YD HLGHAR+ ++D++ RYLE
Sbjct: 1 MVLKIYNTQTRQKETFTTLEPGKVKMYCCGVTVYDYCHLGHARSYTTWDVVRRYLEWSGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV+NFTD+DDKI+ RA + +S R+ Y D+ L PRV+DH++
Sbjct: 61 EVNYVQNFTDIDDKILNRAKEHDSTMEEVSQRFIDAYFEDLRRLNVRDANAYPRVTDHIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE--RVAVDS----R 190
+I +I + AY V+GDV++ V P+YG+LS ++LE+ + G RVAV +
Sbjct: 121 EIHQLIDTLTATGHAYAVDGDVYYNVGHFPDYGKLSRRQLEDLQMGASGRVAVADPETLK 180
Query: 191 KRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPH 250
K+NPADFALWKAAK GEP+WDSPWGPGRPGWHIECSAM L DIHGGG DL+FPH
Sbjct: 181 KKNPADFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGGGGDLVFPH 240
Query: 251 HENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER-YHPLALRHFL 309
HENEIAQS AA + YWMHNG VT EKMSKSLGNF TIR++ +R P+ +R F+
Sbjct: 241 HENEIAQSEAATGKTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLDRPVDPMVVRLFI 300
Query: 310 ISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH-GKTARINPAAEDCINK 368
+ HYR PL+++ + SA++ ++TL+D + + G + +P D
Sbjct: 301 LQGHYRKPLDFTDEAIASANNG----WETLKDGLLFAQQYGAPLGWSDDSSPGKYDTTED 356
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
F M DD NT L F+ A K + N+L + Q I ++ K E+
Sbjct: 357 ALQRFRVAMDDDFNTPGGLAVLFELA-KELRRQGNLLAHEGKTDTQSDRIYAIWKTLVEL 415
Query: 429 KEVLRILGLL---PPGAYSEVKTA 449
V + + PP A + A
Sbjct: 416 AGVFGLEAVTQAQPPAATQGISDA 439
>gi|33152217|ref|NP_873570.1| cysteinyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
gi|38372510|sp|Q7VMA0.1|SYC_HAEDU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|33148439|gb|AAP95959.1| cysteinyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
Length = 459
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 194/421 (46%), Positives = 252/421 (59%), Gaps = 29/421 (6%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI +VGMYVCGVT YDL H GH R VSFD++ RYL + +
Sbjct: 2 LKIYNTLKREKEEFKPINPAQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E+ +L R E D L + P +PR ++H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNESCEALVERMIAEMHNDFDALNIMRPDVEPRATEHIAEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F V YG LS Q L+ +AG RV + S K+NP DF
Sbjct: 122 IAMVEKLIMNGHAYVAADGDVMFDVTSFNQYGALSRQNLDQLQAGARVEIKSAKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKRSKENEPSWLSPWGNGRPGWHIECSAMNNKELGEHFDIHGGGADLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A Q V+YW+H G +T + EKMSKS+GNFF+IR + Y +LR+F ++AHYRS
Sbjct: 242 SCCAHQGEYVNYWLHTGMLTIDKEKMSKSVGNFFSIRHMLGLYDAESLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS LD A A+ +Y L+ C++++ Q +G + F M
Sbjct: 302 LDYSTDNLDLARSALERLYTALRGCDLSV---QANGGENYVTA------------FKTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ A +N L K + +QQ +L L KE+ +LGL
Sbjct: 347 DDDFNTPAALAVLFEMA-----REVNKL-KTEDQQQANALAVCL-------KELAAVLGL 393
Query: 438 L 438
L
Sbjct: 394 L 394
>gi|387902615|ref|YP_006332954.1| cysteinyl-tRNA synthetase [Burkholderia sp. KJ006]
gi|387577507|gb|AFJ86223.1| Cysteinyl-tRNA synthetase [Burkholderia sp. KJ006]
Length = 465
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 190/399 (47%), Positives = 247/399 (61%), Gaps = 19/399 (4%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L+IYN++ + K++F P G+V MYVCG+T YD H+GHAR V FDL+ R+L +
Sbjct: 3 SLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGYR 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TDVDDKIIRRA + GE+ SL++R+ D A L P +PR + + Q
Sbjct: 63 VTYVRNITDVDDKIIRRAVENGESIKSLTDRFIGAMHDDEAALGIQRPDIEPRATQFIPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI Q+ N AY +GDV ++V K NYG+LSG+ L++ RAGERVA + K +P D
Sbjct: 123 MLGMIEQLEANGYAYQASDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDAKEDPLD 182
Query: 197 FALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK AKA +P SW S +G GRPGWHIECSAM L FDIHGGG DL FPHHEN
Sbjct: 183 FVLWKRAKAEDPEGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A + V+YWMHNG V +NEKMSKSLGNFFTIR++ ERY +R F++ H
Sbjct: 243 EIAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRFFIVRTH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSPLNYS + LD A ++ +Y L+D E + A D F
Sbjct: 303 YRSPLNYSDVHLDDARASLTRLYTALKDVEP--------------DALALDWNEPYAQRF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 412
A M+DD+NT + F+ A + +N + + +Q KQ
Sbjct: 349 AAAMNDDINTPVAVATLFELAGE-VNRTRDASLARQLKQ 386
>gi|190568970|ref|ZP_03021871.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Tsiankovskii-I]
gi|190559894|gb|EDV13878.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Tsiankovskii-I]
Length = 465
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/381 (45%), Positives = 243/381 (63%), Gaps = 9/381 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE FTP+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ +++NR+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIANRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + + + K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD------LEKFQTAF 354
Query: 374 HARMSDDLNTSHILTGAFQDA 394
M+DD NT++ +T + A
Sbjct: 355 EEAMNDDFNTANAITELYNVA 375
>gi|377821178|ref|YP_004977549.1| cysteinyl-tRNA synthetase [Burkholderia sp. YI23]
gi|357936013|gb|AET89572.1| cysteinyl-tRNA synthetase [Burkholderia sp. YI23]
Length = 465
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/423 (44%), Positives = 254/423 (60%), Gaps = 23/423 (5%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L+IYN++ + K+LFTP+ G+V MYVCG+T YD H+GHAR V FD++ R+L +
Sbjct: 3 SLRIYNTLARDKQLFTPLREGEVRMYVCGITVYDYCHVGHARMFVVFDIVQRWLRESGYK 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKIIRRA + E +L++R+ DM L +PR +D + Q
Sbjct: 63 VTYVRNITDIDDKIIRRAVENNEPIKALTHRFIDAMHEDMDALGVARADIEPRATDFIPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI + N AY +GDV +AV K +YG+LSG+ +E+ RAGERVA + K +P D
Sbjct: 123 MLGMIDALQANGYAYHAKDGDVNYAVRKFADYGKLSGKSIEDLRAGERVAANDAKEDPLD 182
Query: 197 FALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK AK GEP WDS WG GRPGWHIECSAM L +FDIHGGG+DL FPHHEN
Sbjct: 183 FVLWKQAKPGEPVDSGWDSKWGRGRPGWHIECSAMGCTLLGDQFDIHGGGMDLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A + V+YWMHNG V ++EKMSKSLGNFFTIR++ E++ +R F+ AH
Sbjct: 243 EIAQSEGATGKTFVNYWMHNGFVQIDSEKMSKSLGNFFTIREVLEKFDAEVVRFFIARAH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSPLNYS + +D A +A+ +Y L+D E + A+ F
Sbjct: 303 YRSPLNYSDVHIDDAKNALTRLYTALKDVEPDNQQLDWNEANAQ--------------RF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
+ M+DD NT ++ F + S +N + +Q L L ++ E + L+
Sbjct: 349 QSAMNDDFNTPVAVSVLFD-----LASEVNRTRDSALARQLKELAGVLGLLQREPRAFLQ 403
Query: 434 ILG 436
G
Sbjct: 404 QAG 406
>gi|134296083|ref|YP_001119818.1| cysteinyl-tRNA synthetase [Burkholderia vietnamiensis G4]
gi|166200137|sp|A4JFD0.1|SYC_BURVG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|134139240|gb|ABO54983.1| cysteinyl-tRNA synthetase [Burkholderia vietnamiensis G4]
Length = 465
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 190/399 (47%), Positives = 247/399 (61%), Gaps = 19/399 (4%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L+IYN++ + K++F P G+V MYVCG+T YD H+GHAR V FDL+ R+L +
Sbjct: 3 SLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGYR 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TDVDDKIIRRA + GE+ SL++R+ D A L P +PR + + Q
Sbjct: 63 VTYVRNITDVDDKIIRRAVENGESIKSLTDRFIGAMHDDEAALGIQRPDIEPRATQFIPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI Q+ N AY +GDV ++V K NYG+LSG+ L++ RAGERVA + K +P D
Sbjct: 123 MLGMIEQLEANGYAYQASDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDAKEDPLD 182
Query: 197 FALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK AKA +P SW S +G GRPGWHIECSAM L FDIHGGG DL FPHHEN
Sbjct: 183 FVLWKRAKAEDPEGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A + V+YWMHNG V +NEKMSKSLGNFFTIR++ ERY +R F++ H
Sbjct: 243 EIAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRFFIVRTH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSPLNYS + LD A ++ +Y L+D E + A D F
Sbjct: 303 YRSPLNYSDVHLDDARASLTRLYTALKDVEP--------------DALALDWNEPYAQRF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 412
A M+DD+NT + F+ A + +N + + +Q KQ
Sbjct: 349 AAAMNDDINTPVAVATLFELAGE-VNRTRDASLARQLKQ 386
>gi|402566136|ref|YP_006615481.1| cysteinyl-tRNA synthetase [Burkholderia cepacia GG4]
gi|402247333|gb|AFQ47787.1| cysteinyl-tRNA synthetase [Burkholderia cepacia GG4]
Length = 465
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/399 (47%), Positives = 246/399 (61%), Gaps = 19/399 (4%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L+IYN++ + K++F P G+V MYVCG+T YD H+GHAR V FDL+ R+L +
Sbjct: 3 SLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGFR 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKIIRRA + GE SL++R+ D A L P +PR + + Q
Sbjct: 63 VTYVRNITDIDDKIIRRAVENGETIKSLTDRFIGAMHEDEAALGIQRPDIEPRATQFIPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI ++ N AY +GDV ++V K NYG+LSG+ L++ RAGERVA + K +P D
Sbjct: 123 MLGMIEKLETNGYAYQATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDAKEDPLD 182
Query: 197 FALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK AKA +P SW S +G GRPGWHIECSAM L FDIHGGG DL FPHHEN
Sbjct: 183 FVLWKRAKAEDPEGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A + V+YWMHNG V +NEKMSKSLGNFFTIR++ ERY +R F++ H
Sbjct: 243 EIAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRFFIVRTH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSPLNYS + LD A ++ +Y L+D E + A D F
Sbjct: 303 YRSPLNYSDVHLDDARASLTRLYTALKDVEP--------------DTLALDWNEPYAQRF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 412
A M+DD+NT + F+ A + +N + + +Q KQ
Sbjct: 349 AAAMNDDINTPVAVATLFELAGE-VNRTRDASLARQLKQ 386
>gi|152980026|ref|YP_001353798.1| cysteinyl-tRNA synthetase [Janthinobacterium sp. Marseille]
gi|166200150|sp|A6SZV1.1|SYC_JANMA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|151280103|gb|ABR88513.1| Cysteinyl-tRNA synthetase [Janthinobacterium sp. Marseille]
Length = 464
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 182/370 (49%), Positives = 237/370 (64%), Gaps = 18/370 (4%)
Query: 18 TLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
LKIYN++ ++K+ FTPI GKV MYVCG+T YD H+GHAR V FDL+ R+L E
Sbjct: 3 ALKIYNTLAREKQPFTPIEPGKVRMYVCGMTVYDYCHIGHARVMVVFDLVQRWLRASGYE 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
V YVRN TD+DDKII+RA + GE+ +L+ R+ D A L P ++PR ++++ Q
Sbjct: 63 VNYVRNITDIDDKIIKRAAENGESISALTQRFIDAMDEDAAALGVQKPDHEPRATNYVPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ +I + N AY +GDV ++V P YG+LSG+ L++ RAGERV V++ KR+P D
Sbjct: 123 MLGLIEALERNGLAYKSSDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDPLD 182
Query: 197 FALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK++K EP W S WG GRPGWHIECSAM+ L +FDIHGGG DL FPHHEN
Sbjct: 183 FVLWKSSKEAEPDEVKWASKWGSGRPGWHIECSAMACELLGQQFDIHGGGADLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A Q + V+YWMHNG V +NEKMSKSLGNFFTIR++ +Y +R F++ AH
Sbjct: 243 EIAQSEGASQHTFVNYWMHNGFVRVDNEKMSKSLGNFFTIREVLAKYDSEVVRFFILRAH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRS LNYS LD A +A+ +Y L+ ++P Q AA D F
Sbjct: 303 YRSQLNYSDAHLDDARNALTRMYTALK----GVAPDQ----------AALDMTEAHALRF 348
Query: 374 HARMSDDLNT 383
M+DD NT
Sbjct: 349 AEAMNDDFNT 358
>gi|403071329|ref|ZP_10912661.1| cysteinyl-tRNA ligase [Oceanobacillus sp. Ndiop]
Length = 466
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 183/426 (42%), Positives = 256/426 (60%), Gaps = 23/426 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+++YN++T++KE F P+ GKV MYVCG T Y+ H+G+AR A+ FD + RY E+
Sbjct: 1 MTIRVYNTLTREKEDFKPLEEGKVSMYVCGPTVYNYIHIGNARPAIVFDTVRRYFEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V YV NFTDVDDKII+ A +LGE+ L++++ Q YL D+ L T+ PRV + M+
Sbjct: 61 NVDYVLNFTDVDDKIIKTARELGEDVPELADKFIQAYLEDVGALGVKKATHNPRVMETMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I I ++ AY EGDV+F YG+LS Q ++ R+G R+ V +K +P D
Sbjct: 121 DIIAFIDALVQKGFAYEAEGDVYFKPRAFNGYGKLSHQSIDELRSGARIQVGEKKNDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GE SWDSPWG GRPGWHIECSAM YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKKAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + +YWMHNG++ +NEKMSKSLGNF R + + P LR F++S HYR+
Sbjct: 241 QSEAMTGHTFANYWMHNGYINIDNEKMSKSLGNFVLTRDLVAHHDPQVLRFFMLSVHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRD 371
P+N++ L+SA ++ I + EH K + ++ + I+ L++
Sbjct: 301 PINFTEELLESAKNSYDRIKTAYHNL--------EHRKQSSMDLINDTDVWIPLIDGLKN 352
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F A M DD NT++ ++ F D K N L Q KQ ++I+ +K + +
Sbjct: 353 RFEAEMDDDFNTANAISVLF-DLSKEANVYL------QSKQTSAAVIDHFQKT---IMTL 402
Query: 432 LRILGL 437
L++LG+
Sbjct: 403 LQVLGI 408
>gi|429744209|ref|ZP_19277714.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 020 str. F0370]
gi|429163425|gb|EKY05652.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 020 str. F0370]
Length = 473
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 183/391 (46%), Positives = 234/391 (59%), Gaps = 30/391 (7%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T+QKE F+PI V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 2 LNLYNTLTRQKEAFSPIDPANVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + GE L+ R+ D L L P +P+ ++++ ++
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGDLTARFIAAMHEDADALGVLRPDLEPKATENIAEM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I D AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF
Sbjct: 122 IAMIENLIARDKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAKAGEP+W+SPWG GRPGWHIECSAMS FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKAGEPAWESPWGNGRPGWHIECSAMSEKLFGDTFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYH 301
S A S+V YW+HNG + + EKMSKSLGNFFTIR + ++Y
Sbjct: 242 SVGASGHACGHDHAVTHHGKPVASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRDVLKQYD 301
Query: 302 PLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPA 361
P +R F++ AHYRSPLNYS LD A A+ +Y L+ A E+
Sbjct: 302 PEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTALKHTPPAEFALSENA-------- 353
Query: 362 AEDCINKLRDEFHARMSDDLNTSHILTGAFQ 392
N F+A M+DD T + F+
Sbjct: 354 -----NDYTRRFYAAMNDDFGTVEAVAVLFE 379
>gi|415886300|ref|ZP_11548123.1| cysteinyl-tRNA synthetase [Bacillus methanolicus MGA3]
gi|387588953|gb|EIJ81274.1| cysteinyl-tRNA synthetase [Bacillus methanolicus MGA3]
Length = 465
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 174/379 (45%), Positives = 241/379 (63%), Gaps = 9/379 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ ++IYN++T++KE F P+ GKV MYVCG T Y+ H+G+AR A+ FD + RY +
Sbjct: 1 MPIQIYNTLTRKKEEFVPLEPGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYFQFRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V +V NFTDVDDKII+ AN+LGE+ +L+ R+ Y D++ L C PRV+++M+
Sbjct: 61 DVQFVSNFTDVDDKIIKAANELGEDVPTLAERFINAYFEDVSALGCKKADVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I+ +I AY EGDV+F K YG+LS Q ++ RAG R+ V +K++P D
Sbjct: 121 IIIEFISALIEKGYAYESEGDVYFRTRKFDGYGKLSHQSIDELRAGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+AK GE WDSPWG GRPGWHIECSAM YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKSAKEGEIFWDSPWGKGRPGWHIECSAMVKKYLGDTIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR+
Sbjct: 241 QSEAYTGKTFARYWMHNGYINIDNEKMSKSLGNFVLVNDIIKKHDPQVLRFFMLSVHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+NYS L++ + I YQ L+ + A + E+ N + I LR++F
Sbjct: 301 PINYSEELLENTKAGLERIKTSYQNLKHRKNASTGLTEN------NQEWFNKIKSLREQF 354
Query: 374 HARMSDDLNTSHILTGAFQ 392
M DD NT++ ++ F+
Sbjct: 355 IREMDDDFNTANGISVLFE 373
>gi|431927424|ref|YP_007240458.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri RCH2]
gi|431825711|gb|AGA86828.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri RCH2]
Length = 462
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 186/423 (43%), Positives = 246/423 (58%), Gaps = 30/423 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L IYN++T+ KE F P+ V MYVCG+T YD H+GHAR V+FD++ R+L H
Sbjct: 2 MALSIYNTLTKTKEAFRPLQGNNVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGY 61
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN TD+DDKIIRRA + GE +L R D L L P +PR +DH+
Sbjct: 62 DVTYVRNITDIDDKIIRRAGENGEPFQALVERMIAAMHEDETRLDVLRPDIEPRATDHIA 121
Query: 137 QIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+ MI +I+ AY GDV++ V K YG+LS +++E+ + G R+ VD K++P
Sbjct: 122 GMHQMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKQDPL 181
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AK GEPSW SPWG GRPGWHIECS MS L FDIHGGG DL+FPHHENEI
Sbjct: 182 DFVLWKGAKPGEPSWSSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEI 241
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA + WMH G V + EKMSKSLGNFFTIR++ E+YHP +R+ L+S+HYR
Sbjct: 242 AQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYR 301
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SP+NYS L A A+ Y L+ + PA D + F
Sbjct: 302 SPINYSEDSLREAKSALERFYNGLKGL-------------PNVAPAGGD---EFVARFAT 345
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD N+ F D ++ +N L++ P + ++ +KE+ +L
Sbjct: 346 AMDDDFNSPEACAVLF-DMIR----EVNRLRESDPT--------AAAQLAARLKELASVL 392
Query: 436 GLL 438
G+L
Sbjct: 393 GVL 395
>gi|425063642|ref|ZP_18466767.1| Cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
X73]
gi|404382196|gb|EJZ78657.1| Cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
X73]
Length = 459
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 193/435 (44%), Positives = 256/435 (58%), Gaps = 35/435 (8%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCG+T YDL H+GH R V FD++ RYL +L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L + E D L L P +PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENNETCNQLVEKMIAEMHKDFDALNVLRPDVEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I AYV GDV F VE YG+LS Q LE +AG RV + + K+NP DF
Sbjct: 122 IAMIEKLIARQHAYVSANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIVNVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGKGRPGWHIECSAMNHKELGEHFDIHGGGSDLTFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFT+R++ Y ++R+FL++AHYRS
Sbjct: 242 SCCAHSGRYVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSLYDAESVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC------------ 365
LNYS L+ A A+ +Y L+ + + A A +D
Sbjct: 302 LNYSEENLNLAHSALERLYTALRGTDPTAVATEGQNYLAAFREAMDDDFNTPKAISVLFE 361
Query: 366 ----INKLRDE-------FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 414
INKL++E AR+ + + IL +QD +F+ S +
Sbjct: 362 IAREINKLKNEDILKANALAARLRE---LAGILGLLYQDPEQFLQSG--------SDNDE 410
Query: 415 LSLIESLRKIENEVK 429
++LIE+L K N+ +
Sbjct: 411 VALIEALIKQRNDAR 425
>gi|288554704|ref|YP_003426639.1| cysteinyl-tRNA synthetase [Bacillus pseudofirmus OF4]
gi|288545864|gb|ADC49747.1| cysteinyl-tRNA synthetase [Bacillus pseudofirmus OF4]
Length = 465
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 177/419 (42%), Positives = 258/419 (61%), Gaps = 11/419 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +++YNS+T++KE F P+ GKV MYVCG T Y+ H+G+AR + +D++ RYLE+
Sbjct: 1 MAIQLYNSLTKKKETFVPMEEGKVKMYVCGPTVYNYIHIGNARPPIVYDMVRRYLEYRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV ++ NFTDVDDKIIR A++LGE+ +++NR+ +EY D L PRV++ +
Sbjct: 61 EVEFISNFTDVDDKIIRAAHELGEDVFAVANRFIEEYHNDTCALGVKKANKHPRVTETIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I + + ++I + AY GDV+F +K YG+LS Q +++ R+G R+ VD RK +P D
Sbjct: 121 EIIEFVAKLIEKEYAYESGGDVYFRTKKFEGYGKLSSQSIDDLRSGARIEVDERKEDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GE SW+SPWG GRPGWHIECSAM YL DIH GG DL FPHHENEIA
Sbjct: 181 FVLWKAAKEGEVSWESPWGDGRPGWHIECSAMVKKYLGDTIDIHAGGKDLSFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + +YWMHNG + NNEKMSKSLGNF I ++ +R F+++AHYRS
Sbjct: 241 QSEALTGKTMANYWMHNGFININNEKMSKSLGNFVLAHDIIRQHSAEVVRFFMLTAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S LD A + + + + E L ++G+ A I++L++ F
Sbjct: 301 PINFSDELLDGAKNGLERLRTAVSSLEHRLGESADYGEKAEWLTK----ISQLKEAFIKE 356
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD N+++ + F D K N L + +Q ++ + + +E+ +VL I+
Sbjct: 357 MDDDFNSANGIAVMF-DLAKEANRYL------REEQTSKEVLHAFIDLFDELADVLGIV 408
>gi|15896425|ref|NP_349774.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
gi|337738383|ref|YP_004637830.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum DSM 1731]
gi|384459893|ref|YP_005672313.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
gi|21264018|sp|Q97ED6.1|SYC_CLOAB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|15026246|gb|AAK81114.1|AE007813_1 Cysteinyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
gi|325510582|gb|ADZ22218.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
gi|336292051|gb|AEI33185.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum DSM 1731]
Length = 464
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 177/407 (43%), Positives = 252/407 (61%), Gaps = 9/407 (2%)
Query: 19 LKIYNSMTQQKELFTPIVRGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN+MT++KE F P+ +V MYVCG T Y+ H+G+AR + FD + +Y E+ +V
Sbjct: 1 MKIYNTMTRKKEEFVPVKPNEVQMYVCGPTVYNFFHIGNARTFIVFDTVRKYFEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I +AN+ G + L +RY +EY D L T PR ++++ +I
Sbjct: 61 NFIQNFTDIDDKMIAKANNEGVSVKELGDRYIKEYYEDADGLNLERATCNPRATEYIGKI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D + + + AY ++GDV+F YG+LSGQ LE+ AG +AVD RK++PADFA
Sbjct: 121 IDFVKGLQDEGYAYEIDGDVYFNTNAFKEYGKLSGQNLEDRMAGATIAVDDRKKSPADFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+ K GEPSW+SPWG GRPGWHIECS M+ L DIH G IDLIFPHHENEIAQS
Sbjct: 181 LWKSEKPGEPSWESPWGKGRPGWHIECSCMARDLLGDTIDIHAGAIDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YWMH ++ NNEKMSKSL NF T R I + Y +R FL+SAHYR+PL
Sbjct: 241 EARTGKPFSKYWMHAAYLNINNEKMSKSLNNFLTARDILKEYDAEVIRLFLLSAHYRTPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDEFHAR 376
N++ +++A ++ +Y T+ + L+ TA N +E ++ R++F +
Sbjct: 301 NFTEESIEAAKTSLERLYNTINNLGSLLN------NTAESNDDSEYLKALDSYREKFIEK 354
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
M DD NT+ ++ F D K IN ++N K ++ +SL+ L K
Sbjct: 355 MDDDFNTADGISVIF-DLAKDINININGKSSKAAVEKAISLMRELGK 400
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,314,531,104
Number of Sequences: 23463169
Number of extensions: 306704716
Number of successful extensions: 794203
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5970
Number of HSP's successfully gapped in prelim test: 195
Number of HSP's that attempted gapping in prelim test: 772517
Number of HSP's gapped (non-prelim): 6881
length of query: 464
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 318
effective length of database: 8,933,572,693
effective search space: 2840876116374
effective search space used: 2840876116374
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)