Query 012398
Match_columns 464
No_of_seqs 207 out of 1306
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 08:40:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012398.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012398hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 1E-165 4E-170 1304.6 35.1 414 49-464 2-415 (555)
2 1pj3_A NAD-dependent malic enz 100.0 2E-165 7E-170 1305.9 34.4 416 48-464 3-420 (564)
3 1o0s_A NAD-ME, NAD-dependent m 100.0 8E-165 3E-169 1305.3 32.8 419 44-464 33-453 (605)
4 3nv9_A Malic enzyme; rossmann 100.0 1.2E-92 4E-97 737.3 21.9 273 130-460 58-341 (487)
5 2a9f_A Putative malic enzyme ( 100.0 1.3E-86 4.5E-91 683.4 17.6 273 120-460 24-303 (398)
6 1vl6_A Malate oxidoreductase; 100.0 1.6E-83 5.6E-88 659.2 15.3 274 119-460 27-308 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 3.4E-60 1.2E-64 493.8 18.5 274 120-460 22-310 (439)
8 3h9u_A Adenosylhomocysteinase; 98.9 7E-09 2.4E-13 108.3 11.4 130 296-459 171-311 (436)
9 3gvp_A Adenosylhomocysteinase 98.8 2.4E-08 8.4E-13 104.2 13.7 168 251-457 112-318 (435)
10 1x13_A NAD(P) transhydrogenase 98.6 2.3E-08 7.7E-13 102.6 5.3 215 164-446 26-294 (401)
11 3ond_A Adenosylhomocysteinase; 98.2 3.9E-06 1.3E-10 88.9 10.0 132 296-460 225-366 (488)
12 3n58_A Adenosylhomocysteinase; 97.8 9.8E-05 3.4E-09 77.7 11.0 127 296-456 207-344 (464)
13 1l7d_A Nicotinamide nucleotide 97.6 0.00061 2.1E-08 69.0 14.3 229 164-446 19-296 (384)
14 4dio_A NAD(P) transhydrogenase 97.5 0.00011 3.9E-09 76.1 6.3 110 326-453 187-322 (405)
15 3p2y_A Alanine dehydrogenase/p 97.2 0.00045 1.5E-08 71.1 6.4 103 327-446 182-304 (381)
16 3k92_A NAD-GDH, NAD-specific g 96.9 0.0072 2.5E-07 63.0 13.0 178 251-447 126-329 (424)
17 3aoe_E Glutamate dehydrogenase 96.9 0.0076 2.6E-07 62.8 13.1 177 251-447 123-323 (419)
18 4fcc_A Glutamate dehydrogenase 96.9 0.064 2.2E-06 56.4 19.9 182 251-447 141-354 (450)
19 3d4o_A Dipicolinate synthase s 96.8 0.014 4.9E-07 56.5 13.1 115 307-447 133-248 (293)
20 3aog_A Glutamate dehydrogenase 96.8 0.013 4.4E-07 61.4 13.4 176 252-447 141-344 (440)
21 1a4i_A Methylenetetrahydrofola 96.7 0.0033 1.1E-07 62.9 7.9 96 307-446 143-239 (301)
22 3l07_A Bifunctional protein fo 96.5 0.0054 1.8E-07 61.0 8.2 95 308-446 140-236 (285)
23 2yfq_A Padgh, NAD-GDH, NAD-spe 96.5 0.027 9.1E-07 58.7 13.8 176 252-447 117-326 (421)
24 3p2o_A Bifunctional protein fo 96.3 0.0083 2.9E-07 59.6 8.3 96 308-447 139-236 (285)
25 1b0a_A Protein (fold bifunctio 96.3 0.0069 2.4E-07 60.3 7.3 96 307-446 137-233 (288)
26 3ngx_A Bifunctional protein fo 96.3 0.0086 2.9E-07 59.3 7.8 92 307-444 130-222 (276)
27 1edz_A 5,10-methylenetetrahydr 96.3 0.0084 2.9E-07 60.4 7.8 113 311-447 150-278 (320)
28 4a5o_A Bifunctional protein fo 96.2 0.011 3.7E-07 58.8 8.1 96 308-447 140-237 (286)
29 3jyo_A Quinate/shikimate dehyd 96.1 0.015 5.3E-07 56.9 8.6 137 260-420 51-205 (283)
30 3pwz_A Shikimate dehydrogenase 96.1 0.014 4.9E-07 56.8 8.2 159 260-447 44-219 (272)
31 2bma_A Glutamate dehydrogenase 96.1 0.063 2.2E-06 56.7 13.5 179 252-447 159-372 (470)
32 4a26_A Putative C-1-tetrahydro 96.0 0.012 4.2E-07 58.8 7.7 96 305-444 141-239 (300)
33 3r3j_A Glutamate dehydrogenase 95.8 0.32 1.1E-05 51.2 17.6 189 251-458 145-367 (456)
34 1v8b_A Adenosylhomocysteinase; 95.8 0.047 1.6E-06 57.7 11.4 124 303-459 234-357 (479)
35 1v9l_A Glutamate dehydrogenase 95.6 0.082 2.8E-06 55.1 11.9 177 252-447 116-325 (421)
36 3oj0_A Glutr, glutamyl-tRNA re 95.6 0.0061 2.1E-07 52.4 3.0 109 307-447 4-113 (144)
37 2c2x_A Methylenetetrahydrofola 95.6 0.023 7.8E-07 56.4 7.4 98 307-446 136-234 (281)
38 1gpj_A Glutamyl-tRNA reductase 95.5 0.095 3.3E-06 53.3 12.0 102 326-447 164-269 (404)
39 3u95_A Glycoside hydrolase, fa 95.5 0.023 7.9E-07 59.7 7.4 108 330-447 1-162 (477)
40 2tmg_A Protein (glutamate dehy 95.3 0.41 1.4E-05 49.7 16.0 177 252-447 115-319 (415)
41 3don_A Shikimate dehydrogenase 95.2 0.016 5.5E-07 56.8 4.9 111 313-447 101-214 (277)
42 1mld_A Malate dehydrogenase; o 95.1 0.04 1.4E-06 54.4 7.6 101 331-447 2-120 (314)
43 1nvt_A Shikimate 5'-dehydrogen 95.1 0.017 5.9E-07 55.8 4.8 118 210-373 32-159 (287)
44 3tnl_A Shikimate dehydrogenase 95.0 0.036 1.2E-06 55.3 6.9 91 313-420 138-237 (315)
45 3d64_A Adenosylhomocysteinase; 95.0 0.066 2.2E-06 56.8 9.2 110 307-447 258-367 (494)
46 3t4e_A Quinate/shikimate dehyd 95.0 0.04 1.4E-06 54.9 7.2 91 313-420 132-231 (312)
47 3u62_A Shikimate dehydrogenase 94.8 0.043 1.5E-06 52.8 6.5 145 260-445 42-201 (253)
48 1pzg_A LDH, lactate dehydrogen 94.8 0.048 1.6E-06 54.2 7.0 101 330-448 10-136 (331)
49 1pjc_A Protein (L-alanine dehy 94.7 0.052 1.8E-06 54.3 7.2 96 327-446 165-269 (361)
50 1c1d_A L-phenylalanine dehydro 94.7 0.52 1.8E-05 47.9 14.5 167 253-451 92-269 (355)
51 2egg_A AROE, shikimate 5-dehyd 94.6 0.03 1E-06 54.9 5.1 87 314-420 125-215 (297)
52 1hyh_A L-hicdh, L-2-hydroxyiso 94.6 0.032 1.1E-06 54.3 5.3 102 330-448 2-126 (309)
53 1bgv_A Glutamate dehydrogenase 94.6 0.7 2.4E-05 48.5 15.6 179 253-447 137-350 (449)
54 1leh_A Leucine dehydrogenase; 94.6 0.12 4.1E-06 52.6 9.6 159 257-447 93-264 (364)
55 1ldn_A L-lactate dehydrogenase 94.5 0.047 1.6E-06 53.8 6.2 105 330-447 7-126 (316)
56 3dtt_A NADP oxidoreductase; st 94.3 0.11 3.6E-06 48.9 7.9 109 323-447 13-127 (245)
57 2rir_A Dipicolinate synthase, 94.2 0.29 1E-05 47.3 11.0 101 319-445 147-247 (300)
58 2o4c_A Erythronate-4-phosphate 94.2 0.36 1.2E-05 49.5 12.0 116 297-444 81-207 (380)
59 2v6b_A L-LDH, L-lactate dehydr 94.1 0.015 5.1E-07 57.0 1.6 102 331-447 2-119 (304)
60 3ce6_A Adenosylhomocysteinase; 94.1 0.3 1E-05 51.7 11.6 106 321-457 266-372 (494)
61 3mw9_A GDH 1, glutamate dehydr 94.1 0.47 1.6E-05 50.6 12.9 179 251-447 136-352 (501)
62 1b8p_A Protein (malate dehydro 94.0 0.025 8.7E-07 56.0 3.1 111 330-447 6-136 (329)
63 2ekl_A D-3-phosphoglycerate de 93.8 0.68 2.3E-05 45.6 12.9 121 296-445 90-233 (313)
64 1obb_A Maltase, alpha-glucosid 93.8 0.097 3.3E-06 55.2 7.2 105 329-447 3-155 (480)
65 2i6t_A Ubiquitin-conjugating e 93.8 0.1 3.5E-06 51.5 6.9 100 330-447 15-128 (303)
66 1t2d_A LDH-P, L-lactate dehydr 93.7 0.058 2E-06 53.5 5.0 100 330-448 5-130 (322)
67 3tri_A Pyrroline-5-carboxylate 93.6 0.11 3.8E-06 50.0 6.8 36 329-373 3-38 (280)
68 3fef_A Putative glucosidase LP 93.6 0.068 2.3E-06 56.0 5.5 105 328-447 4-149 (450)
69 2hjr_A Malate dehydrogenase; m 93.6 0.047 1.6E-06 54.2 4.2 104 330-448 15-135 (328)
70 2ewd_A Lactate dehydrogenase,; 93.6 0.056 1.9E-06 52.9 4.6 100 330-448 5-125 (317)
71 1o6z_A MDH, malate dehydrogena 93.5 0.037 1.3E-06 54.2 3.1 102 331-447 2-122 (303)
72 2g1u_A Hypothetical protein TM 93.4 0.1 3.6E-06 45.1 5.6 102 325-445 15-119 (155)
73 2zqz_A L-LDH, L-lactate dehydr 93.4 0.051 1.7E-06 54.1 4.0 106 329-447 9-128 (326)
74 3oet_A Erythronate-4-phosphate 93.4 0.5 1.7E-05 48.5 11.4 117 297-445 84-211 (381)
75 2eez_A Alanine dehydrogenase; 93.4 0.12 4.2E-06 51.7 6.7 96 327-446 164-268 (369)
76 1s6y_A 6-phospho-beta-glucosid 93.3 0.074 2.5E-06 55.5 5.3 107 330-447 8-155 (450)
77 3d0o_A L-LDH 1, L-lactate dehy 93.3 0.051 1.7E-06 53.7 3.8 107 328-447 5-126 (317)
78 1ez4_A Lactate dehydrogenase; 93.3 0.062 2.1E-06 53.3 4.5 105 330-447 6-124 (318)
79 3vku_A L-LDH, L-lactate dehydr 93.2 0.075 2.6E-06 53.3 4.8 107 328-447 8-128 (326)
80 3fbt_A Chorismate mutase and s 93.1 0.12 4.2E-06 50.7 6.2 104 314-447 107-218 (282)
81 3o8q_A Shikimate 5-dehydrogena 93.0 0.15 5E-06 49.9 6.6 99 260-373 50-159 (281)
82 1y6j_A L-lactate dehydrogenase 93.0 0.1 3.6E-06 51.5 5.5 100 330-447 8-126 (318)
83 2rcy_A Pyrroline carboxylate r 93.0 0.49 1.7E-05 43.9 9.8 37 329-373 4-40 (262)
84 1a5z_A L-lactate dehydrogenase 93.0 0.077 2.6E-06 52.2 4.5 98 331-448 2-120 (319)
85 2gcg_A Glyoxylate reductase/hy 92.9 0.68 2.3E-05 45.8 11.3 122 296-445 98-247 (330)
86 2dbq_A Glyoxylate reductase; D 92.8 1.7 5.7E-05 43.1 13.9 92 324-444 145-240 (334)
87 1oju_A MDH, malate dehydrogena 92.7 0.083 2.8E-06 52.0 4.3 103 331-447 2-121 (294)
88 1jw9_B Molybdopterin biosynthe 92.5 0.1 3.5E-06 49.7 4.6 103 326-443 28-153 (249)
89 1smk_A Malate dehydrogenase, g 92.5 0.17 5.9E-06 50.0 6.4 104 330-447 9-128 (326)
90 3tum_A Shikimate dehydrogenase 92.5 0.21 7E-06 48.7 6.8 107 314-443 110-224 (269)
91 1u8x_X Maltose-6'-phosphate gl 92.5 0.069 2.3E-06 56.2 3.6 106 329-447 28-174 (472)
92 1gtm_A Glutamate dehydrogenase 92.4 1.5 5E-05 45.4 13.4 178 252-447 115-322 (419)
93 1x7d_A Ornithine cyclodeaminas 92.4 0.19 6.6E-06 50.5 6.6 114 314-455 116-238 (350)
94 2xxj_A L-LDH, L-lactate dehydr 92.3 0.061 2.1E-06 53.1 2.7 104 330-447 1-119 (310)
95 1up7_A 6-phospho-beta-glucosid 92.2 0.2 6.7E-06 51.8 6.6 104 330-447 3-144 (417)
96 1lu9_A Methylene tetrahydromet 92.1 1.4 4.8E-05 42.0 12.1 120 278-420 63-199 (287)
97 1ur5_A Malate dehydrogenase; o 92.1 0.12 4.2E-06 50.7 4.6 103 330-447 3-122 (309)
98 4g2n_A D-isomer specific 2-hyd 92.0 1.3 4.3E-05 44.7 12.0 121 296-445 116-264 (345)
99 3gvi_A Malate dehydrogenase; N 91.9 0.14 4.7E-06 51.2 4.9 106 327-447 5-127 (324)
100 1txg_A Glycerol-3-phosphate de 91.9 0.47 1.6E-05 45.5 8.5 100 331-447 2-107 (335)
101 1wwk_A Phosphoglycerate dehydr 91.9 1.1 3.9E-05 43.9 11.3 108 308-445 103-233 (307)
102 2hk9_A Shikimate dehydrogenase 91.9 0.3 1E-05 46.8 7.0 108 313-445 113-222 (275)
103 2hmt_A YUAA protein; RCK, KTN, 91.8 0.075 2.5E-06 44.1 2.4 101 327-447 4-108 (144)
104 3nep_X Malate dehydrogenase; h 91.7 0.099 3.4E-06 52.0 3.6 104 331-447 2-121 (314)
105 1nyt_A Shikimate 5-dehydrogena 91.7 0.32 1.1E-05 46.5 6.9 49 313-373 103-151 (271)
106 2vhw_A Alanine dehydrogenase; 91.7 0.19 6.6E-06 50.6 5.6 95 326-444 165-268 (377)
107 1zud_1 Adenylyltransferase THI 91.6 0.15 5.1E-06 48.7 4.5 103 326-443 25-150 (251)
108 1lld_A L-lactate dehydrogenase 91.6 0.11 3.6E-06 50.3 3.5 103 329-447 7-127 (319)
109 3p7m_A Malate dehydrogenase; p 91.5 0.12 4.1E-06 51.5 3.9 106 328-447 4-125 (321)
110 1omo_A Alanine dehydrogenase; 91.4 0.7 2.4E-05 45.6 9.2 112 314-455 112-229 (322)
111 1p77_A Shikimate 5-dehydrogena 91.4 0.24 8.3E-06 47.5 5.8 49 313-373 103-151 (272)
112 3d1l_A Putative NADP oxidoredu 91.4 0.14 4.9E-06 47.9 4.1 38 325-373 6-43 (266)
113 3kkj_A Amine oxidase, flavin-c 91.2 0.19 6.3E-06 42.9 4.2 31 331-373 4-34 (336)
114 4dgs_A Dehydrogenase; structur 91.1 1.3 4.5E-05 44.5 11.1 107 308-446 130-260 (340)
115 3ba1_A HPPR, hydroxyphenylpyru 91.0 1.2 4.1E-05 44.5 10.6 90 324-445 159-252 (333)
116 1z82_A Glycerol-3-phosphate de 90.9 0.29 9.9E-06 47.8 5.9 98 329-449 14-116 (335)
117 3hdj_A Probable ornithine cycl 90.9 1.4 4.6E-05 43.6 10.7 110 317-457 111-227 (313)
118 2zyd_A 6-phosphogluconate dehy 90.8 0.57 2E-05 48.9 8.4 102 326-447 12-116 (480)
119 1xdw_A NAD+-dependent (R)-2-hy 90.8 1.8 6E-05 43.0 11.6 119 296-445 91-235 (331)
120 1guz_A Malate dehydrogenase; o 90.8 0.21 7.3E-06 48.8 4.9 99 331-447 2-121 (310)
121 3k96_A Glycerol-3-phosphate de 90.8 0.76 2.6E-05 46.1 8.9 100 329-448 29-137 (356)
122 1hye_A L-lactate/malate dehydr 90.7 0.33 1.1E-05 47.6 6.1 102 331-447 2-125 (313)
123 2d4a_B Malate dehydrogenase; a 90.7 0.13 4.6E-06 50.6 3.3 96 331-447 1-119 (308)
124 3pqe_A L-LDH, L-lactate dehydr 90.7 0.12 4.2E-06 51.6 3.0 106 329-447 5-125 (326)
125 3tl2_A Malate dehydrogenase; c 90.6 0.19 6.3E-06 50.0 4.3 107 327-447 6-130 (315)
126 3k5p_A D-3-phosphoglycerate de 90.6 3 0.0001 43.2 13.4 119 296-445 102-245 (416)
127 1x0v_A GPD-C, GPDH-C, glycerol 90.4 0.58 2E-05 45.5 7.5 111 329-448 8-128 (354)
128 2cuk_A Glycerate dehydrogenase 90.4 2.3 7.7E-05 41.9 11.8 116 296-445 87-230 (311)
129 3gvx_A Glycerate dehydrogenase 90.3 1.8 6.1E-05 42.5 10.9 37 325-373 118-154 (290)
130 3jtm_A Formate dehydrogenase, 90.2 2.1 7.3E-05 43.1 11.7 123 296-445 108-257 (351)
131 3fi9_A Malate dehydrogenase; s 90.2 0.51 1.7E-05 47.5 7.1 105 327-447 6-129 (343)
132 1sc6_A PGDH, D-3-phosphoglycer 90.2 3.5 0.00012 42.2 13.4 66 296-373 91-177 (404)
133 3evt_A Phosphoglycerate dehydr 90.1 0.97 3.3E-05 45.1 9.0 66 296-373 83-169 (324)
134 2d5c_A AROE, shikimate 5-dehyd 90.1 0.47 1.6E-05 44.8 6.4 104 314-445 102-207 (263)
135 3ado_A Lambda-crystallin; L-gu 90.1 0.35 1.2E-05 48.3 5.7 32 329-372 6-37 (319)
136 4e12_A Diketoreductase; oxidor 90.0 0.13 4.5E-06 49.3 2.5 32 330-373 5-36 (283)
137 4huj_A Uncharacterized protein 90.0 0.23 7.8E-06 45.8 4.0 93 330-448 24-117 (220)
138 4hy3_A Phosphoglycerate oxidor 90.0 1.3 4.5E-05 45.0 9.9 109 308-445 134-267 (365)
139 3i83_A 2-dehydropantoate 2-red 89.6 0.45 1.5E-05 46.3 6.0 102 330-448 3-109 (320)
140 1qp8_A Formate dehydrogenase; 89.6 3.3 0.00011 40.6 12.3 67 296-374 71-157 (303)
141 2d0i_A Dehydrogenase; structur 89.6 2 7E-05 42.6 10.9 90 325-444 142-235 (333)
142 2j6i_A Formate dehydrogenase; 89.4 1.6 5.5E-05 44.0 10.1 143 277-445 88-258 (364)
143 1j4a_A D-LDH, D-lactate dehydr 89.4 4.4 0.00015 40.1 13.1 120 296-445 92-236 (333)
144 1yj8_A Glycerol-3-phosphate de 89.2 0.46 1.6E-05 47.1 5.8 110 330-448 22-145 (375)
145 2i99_A MU-crystallin homolog; 89.1 1.1 3.9E-05 43.7 8.5 108 315-454 123-237 (312)
146 3h8v_A Ubiquitin-like modifier 88.9 0.42 1.4E-05 47.3 5.3 39 325-374 32-70 (292)
147 2yq5_A D-isomer specific 2-hyd 88.8 4.5 0.00015 40.6 12.8 118 297-445 93-237 (343)
148 2x0j_A Malate dehydrogenase; o 88.8 0.31 1.1E-05 48.2 4.2 104 331-447 2-121 (294)
149 4e21_A 6-phosphogluconate dehy 88.7 1.5 5.2E-05 44.0 9.3 95 327-446 20-117 (358)
150 1hyu_A AHPF, alkyl hydroperoxi 88.6 0.41 1.4E-05 49.8 5.2 99 260-373 135-244 (521)
151 1ks9_A KPA reductase;, 2-dehyd 88.4 0.75 2.6E-05 42.9 6.4 95 331-447 2-100 (291)
152 2izz_A Pyrroline-5-carboxylate 88.3 1.5 5.2E-05 42.6 8.8 98 329-447 22-121 (322)
153 1dxy_A D-2-hydroxyisocaproate 88.3 3.4 0.00012 41.0 11.4 119 296-445 90-234 (333)
154 2p4q_A 6-phosphogluconate dehy 88.3 1.3 4.5E-05 46.5 8.8 98 330-447 11-112 (497)
155 3hg7_A D-isomer specific 2-hyd 88.1 1.1 3.9E-05 44.7 7.8 55 308-374 103-173 (324)
156 3qsg_A NAD-binding phosphogluc 88.1 2.8 9.4E-05 40.7 10.4 91 329-444 24-117 (312)
157 3b1f_A Putative prephenate deh 87.9 0.79 2.7E-05 43.4 6.3 34 330-373 7-40 (290)
158 3rui_A Ubiquitin-like modifier 87.9 0.29 1E-05 49.5 3.5 102 326-442 31-170 (340)
159 1y7t_A Malate dehydrogenase; N 87.9 0.39 1.3E-05 46.9 4.3 110 330-447 5-133 (327)
160 4aj2_A L-lactate dehydrogenase 87.9 0.24 8.2E-06 49.7 2.8 108 326-447 16-139 (331)
161 3gt0_A Pyrroline-5-carboxylate 87.6 0.87 3E-05 42.4 6.3 36 330-373 3-38 (247)
162 1jay_A Coenzyme F420H2:NADP+ o 87.5 0.29 9.8E-06 44.0 2.8 94 331-448 2-101 (212)
163 2w2k_A D-mandelate dehydrogena 87.4 4.7 0.00016 40.1 11.9 39 324-373 158-196 (348)
164 1gdh_A D-glycerate dehydrogena 87.4 3.6 0.00012 40.6 10.9 64 297-372 90-177 (320)
165 2pi1_A D-lactate dehydrogenase 87.3 4.7 0.00016 40.2 11.8 108 308-445 101-231 (334)
166 2raf_A Putative dinucleotide-b 87.0 0.63 2.2E-05 42.7 4.9 37 325-373 15-51 (209)
167 3ldh_A Lactate dehydrogenase; 86.8 0.25 8.4E-06 49.8 2.1 106 328-447 20-141 (330)
168 2g76_A 3-PGDH, D-3-phosphoglyc 86.7 3.7 0.00012 41.0 10.6 119 297-445 112-256 (335)
169 1lss_A TRK system potassium up 86.3 0.69 2.3E-05 38.0 4.3 33 329-373 4-36 (140)
170 1hdo_A Biliverdin IX beta redu 86.2 1.9 6.4E-05 37.4 7.3 97 330-444 4-111 (206)
171 2nac_A NAD-dependent formate d 86.2 3.6 0.00012 42.2 10.4 38 324-373 186-223 (393)
172 2qrj_A Saccharopine dehydrogen 86.0 2.6 9E-05 43.5 9.3 82 329-444 214-300 (394)
173 3gg9_A D-3-phosphoglycerate de 85.9 3.7 0.00013 41.3 10.2 94 324-445 155-252 (352)
174 1pgj_A 6PGDH, 6-PGDH, 6-phosph 85.8 1.4 4.8E-05 45.8 7.3 97 331-447 3-106 (478)
175 2vns_A Metalloreductase steap3 85.8 0.58 2E-05 43.0 4.0 93 327-447 26-118 (215)
176 2h78_A Hibadh, 3-hydroxyisobut 85.6 0.76 2.6E-05 43.8 4.8 32 330-373 4-35 (302)
177 1bg6_A N-(1-D-carboxylethyl)-L 85.6 2.2 7.7E-05 41.0 8.2 93 330-445 5-110 (359)
178 4ej6_A Putative zinc-binding d 85.6 6.4 0.00022 38.8 11.7 104 304-432 159-275 (370)
179 3pp8_A Glyoxylate/hydroxypyruv 85.5 2.2 7.4E-05 42.3 8.2 66 296-373 86-171 (315)
180 3c85_A Putative glutathione-re 85.4 0.26 8.9E-06 43.5 1.3 37 326-373 36-72 (183)
181 4dll_A 2-hydroxy-3-oxopropiona 85.3 0.72 2.5E-05 44.9 4.6 35 327-373 29-63 (320)
182 1npy_A Hypothetical shikimate 85.3 0.99 3.4E-05 43.7 5.5 48 314-373 105-152 (271)
183 3c24_A Putative oxidoreductase 85.3 1.3 4.5E-05 42.0 6.3 90 330-446 12-103 (286)
184 4fgw_A Glycerol-3-phosphate de 85.2 1.3 4.3E-05 45.7 6.5 97 330-435 35-141 (391)
185 2uyy_A N-PAC protein; long-cha 85.1 1.3 4.4E-05 42.5 6.2 90 330-445 31-125 (316)
186 3vrd_B FCCB subunit, flavocyto 85.1 1 3.5E-05 44.2 5.6 35 329-373 2-36 (401)
187 2ew2_A 2-dehydropantoate 2-red 85.0 0.31 1.1E-05 45.9 1.8 32 330-373 4-35 (316)
188 3pef_A 6-phosphogluconate dehy 85.0 1.1 3.8E-05 42.5 5.7 90 330-445 2-96 (287)
189 5mdh_A Malate dehydrogenase; o 85.0 0.38 1.3E-05 48.2 2.4 109 330-447 4-132 (333)
190 3l6d_A Putative oxidoreductase 84.8 1.2 4E-05 43.2 5.7 36 326-373 6-41 (306)
191 3doj_A AT3G25530, dehydrogenas 84.6 1.5 5.3E-05 42.3 6.5 95 325-445 17-116 (310)
192 2iz1_A 6-phosphogluconate dehy 84.4 2.3 7.9E-05 44.0 8.1 98 330-447 6-106 (474)
193 3hhp_A Malate dehydrogenase; M 84.4 0.95 3.2E-05 44.9 5.0 103 331-447 2-121 (312)
194 1mx3_A CTBP1, C-terminal bindi 84.2 5.8 0.0002 39.8 10.7 66 296-373 107-200 (347)
195 4gwg_A 6-phosphogluconate dehy 84.1 2.3 7.9E-05 44.8 8.0 98 330-447 5-106 (484)
196 3h5n_A MCCB protein; ubiquitin 84.0 0.71 2.4E-05 46.4 4.0 103 325-442 114-240 (353)
197 2g5c_A Prephenate dehydrogenas 83.9 2.3 7.9E-05 39.9 7.2 34 330-373 2-35 (281)
198 1id1_A Putative potassium chan 83.8 0.8 2.7E-05 39.3 3.7 34 328-373 2-35 (153)
199 3phh_A Shikimate dehydrogenase 83.8 0.92 3.1E-05 44.3 4.5 100 314-446 107-212 (269)
200 3pdu_A 3-hydroxyisobutyrate de 83.4 1.5 5E-05 41.7 5.7 32 330-373 2-33 (287)
201 1f0y_A HCDH, L-3-hydroxyacyl-C 83.3 1.6 5.4E-05 41.9 5.9 32 330-373 16-47 (302)
202 4e5n_A Thermostable phosphite 83.2 3.5 0.00012 41.0 8.5 121 297-445 90-237 (330)
203 3ggo_A Prephenate dehydrogenas 83.2 3.9 0.00013 40.0 8.8 35 329-373 33-67 (314)
204 2dpo_A L-gulonate 3-dehydrogen 82.9 0.55 1.9E-05 46.5 2.6 33 329-373 6-38 (319)
205 4ezb_A Uncharacterized conserv 82.9 1.5 5E-05 42.9 5.6 33 330-373 25-57 (317)
206 1y8q_A Ubiquitin-like 1 activa 82.8 0.88 3E-05 45.6 4.0 102 325-442 32-156 (346)
207 3ip1_A Alcohol dehydrogenase, 82.7 6 0.0002 39.5 10.1 95 314-431 198-304 (404)
208 4gsl_A Ubiquitin-like modifier 82.6 0.71 2.4E-05 50.3 3.5 102 326-442 323-462 (615)
209 3e8x_A Putative NAD-dependent 82.6 2.3 7.8E-05 38.4 6.4 100 325-444 17-131 (236)
210 3vh1_A Ubiquitin-like modifier 82.4 0.63 2.2E-05 50.5 3.0 38 325-373 323-360 (598)
211 1yb4_A Tartronic semialdehyde 82.4 1.9 6.5E-05 40.6 6.0 21 330-350 4-24 (295)
212 3kb6_A D-lactate dehydrogenase 82.3 8.6 0.00029 38.3 11.0 89 324-442 136-228 (334)
213 2pgd_A 6-phosphogluconate dehy 82.3 2.6 9E-05 43.7 7.6 98 330-447 3-104 (482)
214 2f1k_A Prephenate dehydrogenas 82.2 2.4 8.1E-05 39.7 6.6 31 331-373 2-32 (279)
215 4hb9_A Similarities with proba 82.1 1.2 4.1E-05 42.8 4.6 32 330-373 2-33 (412)
216 4egb_A DTDP-glucose 4,6-dehydr 82.1 3.7 0.00013 39.0 8.0 105 327-443 22-148 (346)
217 3cky_A 2-hydroxymethyl glutara 81.7 1.3 4.3E-05 42.0 4.5 92 330-447 5-101 (301)
218 4b4u_A Bifunctional protein fo 81.6 4.1 0.00014 40.8 8.3 97 307-447 157-255 (303)
219 3ghy_A Ketopantoate reductase 81.0 0.99 3.4E-05 44.1 3.6 102 329-447 3-107 (335)
220 1i36_A Conserved hypothetical 80.5 3.6 0.00012 38.2 7.1 20 331-350 2-21 (264)
221 2pv7_A T-protein [includes: ch 80.4 4.5 0.00015 38.9 8.0 32 330-373 22-54 (298)
222 3abi_A Putative uncharacterize 80.3 0.62 2.1E-05 46.2 1.9 89 330-445 17-109 (365)
223 3o38_A Short chain dehydrogena 80.1 4.3 0.00015 37.4 7.5 36 326-373 19-56 (266)
224 3k6j_A Protein F01G10.3, confi 80.1 1.8 6.3E-05 45.3 5.4 32 330-373 55-86 (460)
225 1vpd_A Tartronate semialdehyde 79.8 1.3 4.5E-05 41.8 3.9 32 330-373 6-37 (299)
226 3hn2_A 2-dehydropantoate 2-red 79.5 1.4 4.7E-05 42.6 4.0 100 330-447 3-106 (312)
227 3r6d_A NAD-dependent epimerase 79.5 1.5 5.1E-05 39.2 4.0 96 330-444 6-108 (221)
228 4a9w_A Monooxygenase; baeyer-v 79.1 1.8 6.2E-05 40.6 4.6 34 329-374 3-36 (357)
229 3d1c_A Flavin-containing putat 79.1 1.6 5.6E-05 41.6 4.4 35 329-374 4-38 (369)
230 3dhn_A NAD-dependent epimerase 78.7 2.8 9.4E-05 37.4 5.5 96 330-444 5-112 (227)
231 3fwz_A Inner membrane protein 78.5 0.86 2.9E-05 38.8 2.0 32 330-373 8-39 (140)
232 3l4b_C TRKA K+ channel protien 78.3 0.87 3E-05 41.4 2.1 96 331-446 2-101 (218)
233 3gpi_A NAD-dependent epimerase 78.1 1.6 5.5E-05 40.6 3.9 95 329-444 3-109 (286)
234 3qha_A Putative oxidoreductase 78.1 2.6 8.8E-05 40.5 5.4 91 329-445 15-106 (296)
235 3lzw_A Ferredoxin--NADP reduct 77.9 2.3 7.7E-05 39.7 4.9 34 329-374 7-40 (332)
236 3fbs_A Oxidoreductase; structu 77.8 1.9 6.5E-05 39.5 4.3 32 330-373 3-34 (297)
237 3oz2_A Digeranylgeranylglycero 77.8 1.8 6.2E-05 41.1 4.2 31 331-373 6-36 (397)
238 4id9_A Short-chain dehydrogena 77.6 5.3 0.00018 37.9 7.5 97 325-444 15-126 (347)
239 3f8d_A Thioredoxin reductase ( 77.6 2 6.9E-05 39.7 4.4 33 329-373 15-47 (323)
240 2yjz_A Metalloreductase steap4 79.1 0.47 1.6E-05 43.7 0.0 25 327-351 17-41 (201)
241 2cvz_A Dehydrogenase, 3-hydrox 77.4 1.9 6.6E-05 40.3 4.3 30 331-373 3-32 (289)
242 2pzm_A Putative nucleotide sug 77.4 4.5 0.00015 38.5 6.9 103 325-444 16-136 (330)
243 2ahr_A Putative pyrroline carb 77.3 2.1 7.3E-05 39.7 4.5 32 330-373 4-35 (259)
244 3fg2_P Putative rubredoxin red 77.0 2.4 8.4E-05 41.9 5.1 35 330-374 2-36 (404)
245 3alj_A 2-methyl-3-hydroxypyrid 76.8 2.3 8E-05 41.3 4.8 37 327-375 9-45 (379)
246 3g0o_A 3-hydroxyisobutyrate de 76.3 1.8 6.2E-05 41.6 3.8 33 329-373 7-39 (303)
247 2jae_A L-amino acid oxidase; o 76.1 2.3 7.9E-05 42.8 4.6 42 322-375 4-45 (489)
248 2zbw_A Thioredoxin reductase; 76.0 2.2 7.7E-05 40.1 4.3 34 329-374 5-38 (335)
249 1tt5_B Ubiquitin-activating en 75.9 1.6 5.3E-05 45.4 3.4 38 325-373 36-73 (434)
250 3hyw_A Sulfide-quinone reducta 75.9 1.9 6.6E-05 43.3 4.0 34 330-373 3-36 (430)
251 3itj_A Thioredoxin reductase 1 75.8 1.9 6.4E-05 40.3 3.7 33 329-373 22-54 (338)
252 3i6i_A Putative leucoanthocyan 75.6 1.3 4.4E-05 42.6 2.5 99 327-441 8-117 (346)
253 1ygy_A PGDH, D-3-phosphoglycer 75.4 11 0.00036 39.8 9.6 66 296-373 88-174 (529)
254 3h8l_A NADH oxidase; membrane 75.0 2.7 9.1E-05 41.5 4.7 36 330-374 2-37 (409)
255 3nix_A Flavoprotein/dehydrogen 74.4 3.8 0.00013 40.0 5.6 34 329-374 5-38 (421)
256 3lxd_A FAD-dependent pyridine 74.4 3.1 0.00011 41.3 5.0 38 328-375 8-45 (415)
257 2q7v_A Thioredoxin reductase; 74.4 2.4 8.2E-05 39.9 4.0 33 329-373 8-40 (325)
258 3rp8_A Flavoprotein monooxygen 74.3 2.9 9.9E-05 41.0 4.7 36 327-374 21-56 (407)
259 1y8q_B Anthracycline-, ubiquit 74.2 1.9 6.3E-05 47.2 3.6 38 326-374 14-51 (640)
260 2q1w_A Putative nucleotide sug 74.2 10 0.00034 36.1 8.4 104 326-444 18-137 (333)
261 3dme_A Conserved exported prot 73.9 3 0.0001 39.3 4.6 33 329-373 4-36 (369)
262 2vou_A 2,6-dihydroxypyridine h 73.7 3.5 0.00012 40.4 5.2 35 328-374 4-38 (397)
263 2xdo_A TETX2 protein; tetracyc 73.7 2.9 9.9E-05 41.0 4.6 36 327-374 24-59 (398)
264 1np3_A Ketol-acid reductoisome 73.6 4.7 0.00016 39.7 6.1 34 328-373 15-48 (338)
265 3ic5_A Putative saccharopine d 73.5 3.6 0.00012 32.5 4.3 96 328-444 4-100 (118)
266 3ab1_A Ferredoxin--NADP reduct 73.4 3.1 0.00011 39.9 4.6 34 329-374 14-47 (360)
267 3slg_A PBGP3 protein; structur 73.4 13 0.00043 35.7 9.0 101 326-444 21-141 (372)
268 3cty_A Thioredoxin reductase; 73.2 2.9 0.0001 39.2 4.3 33 329-373 16-48 (319)
269 1ryi_A Glycine oxidase; flavop 73.1 3.2 0.00011 39.9 4.6 35 329-375 17-51 (382)
270 3r9u_A Thioredoxin reductase; 73.0 3.1 0.00011 38.4 4.4 33 329-373 4-37 (315)
271 3cgv_A Geranylgeranyl reductas 73.0 3 0.0001 40.0 4.4 34 329-374 4-37 (397)
272 3c7a_A Octopine dehydrogenase; 72.9 6.4 0.00022 39.1 6.9 31 330-371 3-33 (404)
273 2ywl_A Thioredoxin reductase r 72.9 3.3 0.00011 35.7 4.3 35 330-376 2-37 (180)
274 7mdh_A Protein (malate dehydro 72.7 3.3 0.00011 42.3 4.8 109 329-447 32-161 (375)
275 1yvv_A Amine oxidase, flavin-c 72.6 3 0.0001 39.2 4.2 33 330-374 3-35 (336)
276 3ef6_A Toluene 1,2-dioxygenase 72.2 4.1 0.00014 40.5 5.3 37 330-376 3-39 (410)
277 3klj_A NAD(FAD)-dependent dehy 72.1 2.4 8.1E-05 42.3 3.6 37 328-376 8-44 (385)
278 2x3n_A Probable FAD-dependent 72.1 3.2 0.00011 40.5 4.4 34 329-374 6-39 (399)
279 4b8w_A GDP-L-fucose synthase; 72.0 6.7 0.00023 36.0 6.4 93 326-444 3-113 (319)
280 1y56_B Sarcosine oxidase; dehy 71.9 3.3 0.00011 39.8 4.4 34 329-374 5-38 (382)
281 3k7m_X 6-hydroxy-L-nicotine ox 71.9 3.6 0.00012 40.4 4.7 33 331-375 3-35 (431)
282 2gag_B Heterotetrameric sarcos 71.8 3.9 0.00013 39.5 4.9 36 329-374 21-56 (405)
283 2ph5_A Homospermidine synthase 71.7 9.6 0.00033 40.4 8.2 99 328-445 12-115 (480)
284 3s2u_A UDP-N-acetylglucosamine 71.6 5.1 0.00018 39.3 5.8 40 402-445 85-124 (365)
285 3m2p_A UDP-N-acetylglucosamine 71.4 9.8 0.00034 35.6 7.5 93 330-444 3-109 (311)
286 3axb_A Putative oxidoreductase 71.4 3.8 0.00013 40.7 4.8 37 325-372 19-55 (448)
287 4ep1_A Otcase, ornithine carba 70.8 27 0.00092 35.3 10.9 168 262-456 117-306 (340)
288 2q0l_A TRXR, thioredoxin reduc 70.8 3.6 0.00012 38.3 4.2 33 330-373 2-34 (311)
289 2gf3_A MSOX, monomeric sarcosi 70.7 3.7 0.00013 39.4 4.4 35 330-376 4-38 (389)
290 2z1m_A GDP-D-mannose dehydrata 70.6 8.6 0.00029 36.1 6.9 103 328-444 2-127 (345)
291 2gf2_A Hibadh, 3-hydroxyisobut 70.5 5.5 0.00019 37.4 5.6 31 331-373 2-32 (296)
292 3gg2_A Sugar dehydrogenase, UD 70.5 4.1 0.00014 42.1 5.0 32 330-373 3-34 (450)
293 2vdc_G Glutamate synthase [NAD 70.5 4.1 0.00014 41.8 5.0 35 328-374 121-155 (456)
294 2xve_A Flavin-containing monoo 70.4 3.5 0.00012 42.0 4.4 38 330-373 3-40 (464)
295 1k0i_A P-hydroxybenzoate hydro 70.4 4.2 0.00014 39.5 4.8 33 330-374 3-35 (394)
296 1pqw_A Polyketide synthase; ro 70.3 12 0.0004 32.9 7.4 50 312-373 22-72 (198)
297 2gv8_A Monooxygenase; FMO, FAD 70.3 3.5 0.00012 41.4 4.3 37 328-374 5-41 (447)
298 3grf_A Ornithine carbamoyltran 70.2 20 0.00068 36.0 9.7 137 260-415 90-240 (328)
299 3llv_A Exopolyphosphatase-rela 70.1 4.2 0.00014 34.0 4.1 34 328-373 5-38 (141)
300 3ew7_A LMO0794 protein; Q8Y8U8 70.1 17 0.00058 31.7 8.3 91 331-444 2-103 (221)
301 1zk7_A HGII, reductase, mercur 69.9 4.1 0.00014 41.1 4.8 33 329-373 4-36 (467)
302 2dq4_A L-threonine 3-dehydroge 69.8 5.5 0.00019 38.6 5.5 105 306-432 143-253 (343)
303 2uzz_A N-methyl-L-tryptophan o 69.8 3.8 0.00013 39.1 4.3 35 330-376 3-37 (372)
304 3ehe_A UDP-glucose 4-epimerase 69.8 15 0.0005 34.4 8.3 95 331-444 3-114 (313)
305 3c96_A Flavin-containing monoo 69.7 3.9 0.00013 40.3 4.5 35 329-374 4-38 (410)
306 1vdc_A NTR, NADPH dependent th 69.5 3.3 0.00011 38.9 3.7 33 328-372 7-39 (333)
307 4eqs_A Coenzyme A disulfide re 69.4 3.5 0.00012 41.7 4.1 34 331-374 2-35 (437)
308 2gqw_A Ferredoxin reductase; f 69.2 5.1 0.00018 39.9 5.3 39 329-377 7-45 (408)
309 3iwa_A FAD-dependent pyridine 69.2 4.2 0.00014 41.1 4.7 37 329-375 3-39 (472)
310 3i3l_A Alkylhalidase CMLS; fla 69.1 6.7 0.00023 41.8 6.4 37 327-375 21-57 (591)
311 2z2v_A Hypothetical protein PH 69.0 2 6.9E-05 43.1 2.3 92 328-445 15-109 (365)
312 1c0p_A D-amino acid oxidase; a 69.0 5.1 0.00018 38.5 5.0 34 329-374 6-39 (363)
313 2oln_A NIKD protein; flavoprot 68.9 4.3 0.00015 39.5 4.5 36 329-376 4-39 (397)
314 3nrc_A Enoyl-[acyl-carrier-pro 68.7 8.6 0.00029 36.0 6.4 37 326-374 23-62 (280)
315 3uox_A Otemo; baeyer-villiger 68.4 4.5 0.00015 42.5 4.9 35 328-374 8-42 (545)
316 3rkr_A Short chain oxidoreduct 68.2 15 0.0005 34.0 7.8 36 326-373 26-62 (262)
317 1e6u_A GDP-fucose synthetase; 67.9 8.2 0.00028 36.1 6.1 87 329-444 3-107 (321)
318 3s5w_A L-ornithine 5-monooxyge 67.8 4.1 0.00014 40.7 4.2 39 329-374 30-68 (463)
319 2d8a_A PH0655, probable L-thre 67.7 5.2 0.00018 38.8 4.9 54 306-372 147-200 (348)
320 3ka7_A Oxidoreductase; structu 67.5 5.4 0.00018 39.0 4.9 33 331-375 2-34 (425)
321 2bka_A CC3, TAT-interacting pr 67.5 9.6 0.00033 34.1 6.3 102 327-444 16-132 (242)
322 2c20_A UDP-glucose 4-epimerase 67.2 14 0.00046 34.7 7.5 99 330-444 2-118 (330)
323 3vtz_A Glucose 1-dehydrogenase 67.0 12 0.00041 35.0 7.1 78 324-420 9-92 (269)
324 4g6h_A Rotenone-insensitive NA 67.0 2.4 8.4E-05 44.0 2.5 32 330-373 43-74 (502)
325 3e48_A Putative nucleoside-dip 67.0 7.7 0.00026 35.9 5.7 96 331-443 2-105 (289)
326 4ap3_A Steroid monooxygenase; 66.8 4.6 0.00016 42.5 4.5 35 328-374 20-54 (549)
327 3pdi_B Nitrogenase MOFE cofact 66.8 3.3 0.00011 43.0 3.4 88 325-440 309-397 (458)
328 3ktd_A Prephenate dehydrogenas 66.8 10 0.00035 37.9 6.8 32 330-373 9-40 (341)
329 3nrn_A Uncharacterized protein 66.6 5.7 0.00019 39.1 4.9 33 331-375 2-34 (421)
330 2r9z_A Glutathione amide reduc 66.4 4.8 0.00016 40.9 4.4 33 329-373 4-36 (463)
331 1dlj_A UDP-glucose dehydrogena 66.4 3.4 0.00012 41.8 3.3 30 331-373 2-31 (402)
332 3dje_A Fructosyl amine: oxygen 66.4 4.8 0.00016 39.7 4.4 37 329-376 6-42 (438)
333 2wm3_A NMRA-like family domain 66.4 2.6 9E-05 39.3 2.3 99 329-445 5-115 (299)
334 1dxl_A Dihydrolipoamide dehydr 66.3 5.5 0.00019 40.1 4.8 34 329-374 6-39 (470)
335 3v76_A Flavoprotein; structura 66.2 4.6 0.00016 41.0 4.3 35 329-375 27-61 (417)
336 3qvo_A NMRA family protein; st 66.2 10 0.00036 34.3 6.3 101 327-444 21-125 (236)
337 3h28_A Sulfide-quinone reducta 66.1 5.2 0.00018 39.9 4.6 35 330-374 3-37 (430)
338 3c4a_A Probable tryptophan hyd 66.1 5.5 0.00019 38.9 4.7 33 331-373 2-34 (381)
339 1mv8_A GMD, GDP-mannose 6-dehy 66.0 4.4 0.00015 41.2 4.1 31 331-373 2-32 (436)
340 1tt5_A APPBP1, amyloid protein 66.0 2.7 9.4E-05 44.7 2.6 103 325-442 28-155 (531)
341 2a87_A TRXR, TR, thioredoxin r 65.9 4.3 0.00015 38.5 3.8 34 328-373 13-46 (335)
342 4ina_A Saccharopine dehydrogen 65.8 4.2 0.00014 41.2 3.9 96 330-445 2-108 (405)
343 4gcm_A TRXR, thioredoxin reduc 65.8 4.9 0.00017 37.7 4.1 32 330-373 7-38 (312)
344 3cgb_A Pyridine nucleotide-dis 65.8 5.2 0.00018 40.8 4.6 65 302-376 6-73 (480)
345 3urh_A Dihydrolipoyl dehydroge 65.7 5.1 0.00017 40.8 4.5 34 329-374 25-58 (491)
346 1pl8_A Human sorbitol dehydrog 65.6 11 0.00038 36.7 6.8 49 312-372 156-204 (356)
347 1yqd_A Sinapyl alcohol dehydro 65.5 13 0.00044 36.5 7.3 49 312-372 171-219 (366)
348 3qj4_A Renalase; FAD/NAD(P)-bi 65.5 3.6 0.00012 39.3 3.2 35 330-373 2-36 (342)
349 3sx6_A Sulfide-quinone reducta 65.4 5.3 0.00018 40.0 4.5 36 330-374 5-40 (437)
350 2dkn_A 3-alpha-hydroxysteroid 65.3 10 0.00035 34.0 6.0 92 331-444 3-114 (255)
351 2qae_A Lipoamide, dihydrolipoy 65.3 5.4 0.00018 40.3 4.5 34 329-374 2-35 (468)
352 3ics_A Coenzyme A-disulfide re 65.3 6.6 0.00022 40.9 5.3 39 328-376 35-73 (588)
353 1fl2_A Alkyl hydroperoxide red 65.2 5 0.00017 37.3 4.0 32 330-373 2-33 (310)
354 2e4g_A Tryptophan halogenase; 65.1 5.6 0.00019 41.4 4.8 38 329-375 25-62 (550)
355 3ihm_A Styrene monooxygenase A 65.1 5.3 0.00018 40.1 4.4 32 330-373 23-54 (430)
356 2weu_A Tryptophan 5-halogenase 65.1 4.5 0.00015 41.2 3.9 37 330-375 3-39 (511)
357 2hqm_A GR, grase, glutathione 65.1 4.9 0.00017 40.9 4.2 35 328-374 10-44 (479)
358 3ek2_A Enoyl-(acyl-carrier-pro 65.0 7.3 0.00025 35.6 5.0 38 324-373 9-49 (271)
359 3oc4_A Oxidoreductase, pyridin 65.0 6.2 0.00021 39.7 4.9 36 330-375 3-38 (452)
360 2q1s_A Putative nucleotide sug 64.9 9.3 0.00032 37.1 6.0 103 326-444 29-151 (377)
361 1w4x_A Phenylacetone monooxyge 64.8 6.1 0.00021 41.0 4.9 36 327-374 14-49 (542)
362 1n2s_A DTDP-4-, DTDP-glucose o 64.7 7.6 0.00026 35.9 5.1 86 331-444 2-104 (299)
363 2bc0_A NADH oxidase; flavoprot 64.7 6.4 0.00022 40.2 5.0 37 329-374 35-71 (490)
364 3ntd_A FAD-dependent pyridine 64.5 6.3 0.00022 40.5 5.0 37 330-376 2-38 (565)
365 2p5y_A UDP-glucose 4-epimerase 64.5 15 0.0005 34.4 7.1 98 331-444 2-117 (311)
366 3k30_A Histamine dehydrogenase 64.5 6.9 0.00024 42.0 5.5 34 329-374 391-424 (690)
367 2cul_A Glucose-inhibited divis 64.4 6.1 0.00021 36.1 4.3 33 329-373 3-35 (232)
368 2aqj_A Tryptophan halogenase, 64.3 5.7 0.00019 41.0 4.6 37 329-374 5-41 (538)
369 3pi7_A NADH oxidoreductase; gr 64.3 33 0.0011 33.1 9.8 88 318-432 155-254 (349)
370 1xq6_A Unknown protein; struct 64.3 8.2 0.00028 34.4 5.1 100 328-444 3-133 (253)
371 1mo9_A ORF3; nucleotide bindin 63.9 5.3 0.00018 41.3 4.3 35 328-374 42-76 (523)
372 1q1r_A Putidaredoxin reductase 63.9 7 0.00024 39.2 5.1 37 329-375 4-40 (431)
373 2yy7_A L-threonine dehydrogena 63.7 6.6 0.00022 36.5 4.5 97 330-442 3-116 (312)
374 1m6i_A Programmed cell death p 63.6 6.6 0.00023 40.3 4.9 37 328-374 10-46 (493)
375 2qa2_A CABE, polyketide oxygen 63.5 5.9 0.0002 40.9 4.5 34 328-373 11-44 (499)
376 4a5l_A Thioredoxin reductase; 63.1 5 0.00017 37.3 3.5 31 331-373 6-36 (314)
377 2zcu_A Uncharacterized oxidore 63.1 5.2 0.00018 36.7 3.7 97 331-443 1-103 (286)
378 2cdc_A Glucose dehydrogenase g 63.1 21 0.0007 34.9 8.2 33 329-373 181-213 (366)
379 2bry_A NEDD9 interacting prote 63.0 6.7 0.00023 40.5 4.8 36 328-375 91-126 (497)
380 3dqp_A Oxidoreductase YLBE; al 63.0 14 0.00047 32.8 6.4 94 331-444 2-106 (219)
381 2yqu_A 2-oxoglutarate dehydrog 62.9 6 0.0002 39.8 4.3 33 330-374 2-34 (455)
382 2o7s_A DHQ-SDH PR, bifunctiona 62.8 8.8 0.0003 40.2 5.7 36 326-373 361-396 (523)
383 3fpz_A Thiazole biosynthetic e 62.8 6.8 0.00023 37.4 4.5 37 327-373 63-99 (326)
384 4a2c_A Galactitol-1-phosphate 62.7 21 0.0007 34.3 7.9 57 304-372 137-193 (346)
385 3c4n_A Uncharacterized protein 62.6 6.9 0.00024 38.6 4.7 35 329-373 36-70 (405)
386 4gde_A UDP-galactopyranose mut 62.5 7.1 0.00024 39.1 4.8 34 329-373 10-43 (513)
387 1zmd_A Dihydrolipoyl dehydroge 62.5 6 0.0002 40.0 4.3 34 329-374 6-39 (474)
388 2qa1_A PGAE, polyketide oxygen 62.4 6.5 0.00022 40.6 4.6 36 326-373 8-43 (500)
389 3dfz_A SIRC, precorrin-2 dehyd 62.4 5.8 0.0002 37.6 3.9 36 326-373 28-63 (223)
390 4eez_A Alcohol dehydrogenase 1 62.3 18 0.00061 34.7 7.5 48 313-372 149-196 (348)
391 2y0c_A BCEC, UDP-glucose dehyd 62.3 6.7 0.00023 40.8 4.7 33 329-373 8-40 (478)
392 3i1j_A Oxidoreductase, short c 62.2 23 0.0008 31.9 7.8 37 325-373 10-47 (247)
393 3l8k_A Dihydrolipoyl dehydroge 62.2 6.9 0.00024 39.6 4.7 35 329-375 4-38 (466)
394 1ges_A Glutathione reductase; 62.1 5.1 0.00018 40.4 3.7 33 329-373 4-36 (450)
395 4fk1_A Putative thioredoxin re 62.0 6.3 0.00022 37.0 4.1 32 330-373 7-38 (304)
396 2eq6_A Pyruvate dehydrogenase 62.0 6.2 0.00021 40.0 4.3 34 329-374 6-39 (464)
397 2a8x_A Dihydrolipoyl dehydroge 61.9 6.6 0.00022 39.6 4.4 33 329-373 3-35 (464)
398 2c5a_A GDP-mannose-3', 5'-epim 61.9 25 0.00085 34.1 8.5 99 328-444 28-145 (379)
399 1hxh_A 3BETA/17BETA-hydroxyste 61.8 6.5 0.00022 36.2 4.1 36 326-373 3-39 (253)
400 2v3a_A Rubredoxin reductase; a 61.8 6 0.0002 38.7 4.0 35 329-373 4-38 (384)
401 1ebd_A E3BD, dihydrolipoamide 61.7 5.7 0.0002 39.9 4.0 32 330-373 4-35 (455)
402 1hdc_A 3-alpha, 20 beta-hydrox 61.7 9.3 0.00032 35.2 5.1 36 326-373 2-38 (254)
403 1v59_A Dihydrolipoamide dehydr 61.6 7.1 0.00024 39.4 4.6 34 329-374 5-38 (478)
404 3m6i_A L-arabinitol 4-dehydrog 61.6 10 0.00034 37.0 5.5 58 303-372 155-212 (363)
405 3cmm_A Ubiquitin-activating en 61.5 6.1 0.00021 45.4 4.5 38 325-373 23-60 (1015)
406 2q2v_A Beta-D-hydroxybutyrate 61.5 9 0.00031 35.2 5.0 35 327-373 2-37 (255)
407 1onf_A GR, grase, glutathione 61.3 6.1 0.00021 40.5 4.2 33 330-374 3-35 (500)
408 2e1m_A L-glutamate oxidase; L- 61.3 8 0.00027 39.1 4.9 35 327-373 42-76 (376)
409 3tzq_B Short-chain type dehydr 61.2 9.4 0.00032 35.6 5.1 37 325-373 7-44 (271)
410 3ihg_A RDME; flavoenzyme, anth 61.2 6 0.00021 40.6 4.1 34 329-374 5-38 (535)
411 3gwf_A Cyclohexanone monooxyge 61.0 5.9 0.0002 41.6 4.0 36 328-374 7-42 (540)
412 1lvl_A Dihydrolipoamide dehydr 60.9 6.9 0.00024 39.6 4.4 33 329-373 5-37 (458)
413 4gbj_A 6-phosphogluconate dehy 60.9 9.3 0.00032 37.0 5.2 89 330-445 6-98 (297)
414 3g3e_A D-amino-acid oxidase; F 60.8 8.3 0.00028 36.8 4.8 37 331-374 2-39 (351)
415 1rsg_A FMS1 protein; FAD bindi 60.8 6.9 0.00024 40.0 4.4 24 327-350 6-29 (516)
416 1s3e_A Amine oxidase [flavin-c 60.7 7.6 0.00026 39.6 4.7 36 329-376 4-39 (520)
417 2x4g_A Nucleoside-diphosphate- 60.6 17 0.00059 34.1 6.9 97 330-444 14-126 (342)
418 3enk_A UDP-glucose 4-epimerase 60.5 11 0.00039 35.4 5.6 97 329-444 5-129 (341)
419 2pyx_A Tryptophan halogenase; 60.4 6.8 0.00023 40.4 4.3 40 329-375 7-53 (526)
420 2qcu_A Aerobic glycerol-3-phos 60.4 7.3 0.00025 40.0 4.5 34 329-374 3-36 (501)
421 2nvu_B Maltose binding protein 60.4 4.3 0.00015 44.6 2.9 36 328-374 410-445 (805)
422 4b63_A L-ornithine N5 monooxyg 60.3 5 0.00017 41.5 3.3 22 331-352 41-62 (501)
423 3i6d_A Protoporphyrinogen oxid 60.3 7.7 0.00026 38.1 4.5 38 330-373 6-43 (470)
424 3o0h_A Glutathione reductase; 60.2 8 0.00027 39.3 4.7 33 329-373 26-58 (484)
425 1xdi_A RV3303C-LPDA; reductase 60.0 6.7 0.00023 40.1 4.2 36 330-374 3-38 (499)
426 2cdu_A NADPH oxidase; flavoenz 60.0 8.4 0.00029 38.6 4.8 34 331-374 2-35 (452)
427 1nhp_A NADH peroxidase; oxidor 59.8 8.6 0.00029 38.5 4.8 35 331-375 2-36 (447)
428 1vl0_A DTDP-4-dehydrorhamnose 59.8 10 0.00036 34.9 5.1 88 326-444 9-113 (292)
429 2vvm_A Monoamine oxidase N; FA 59.8 8 0.00027 38.9 4.6 32 330-373 40-71 (495)
430 2zb4_A Prostaglandin reductase 59.8 19 0.00064 34.9 7.1 56 307-373 137-195 (357)
431 3lad_A Dihydrolipoamide dehydr 59.6 8.6 0.0003 38.8 4.9 33 329-373 3-35 (476)
432 3e1t_A Halogenase; flavoprotei 59.4 6.4 0.00022 40.4 3.9 35 328-374 6-40 (512)
433 2wpf_A Trypanothione reductase 59.4 10 0.00035 39.0 5.4 32 329-371 7-38 (495)
434 1xhc_A NADH oxidase /nitrite r 59.4 5.7 0.00019 39.1 3.4 34 329-375 8-41 (367)
435 1rp0_A ARA6, thiazole biosynth 59.3 7.7 0.00026 36.6 4.2 36 328-374 38-73 (284)
436 3lk7_A UDP-N-acetylmuramoylala 59.1 9.2 0.00031 39.0 5.0 25 326-350 6-30 (451)
437 1zq6_A Otcase, ornithine carba 59.1 61 0.0021 33.0 10.9 115 284-417 145-273 (359)
438 3tpf_A Otcase, ornithine carba 59.0 50 0.0017 32.8 10.1 170 260-456 81-274 (307)
439 2wtb_A MFP2, fatty acid multif 58.9 6.1 0.00021 43.4 3.8 32 330-373 313-344 (725)
440 1uzm_A 3-oxoacyl-[acyl-carrier 58.8 24 0.00084 32.2 7.4 77 324-420 10-92 (247)
441 3st7_A Capsular polysaccharide 58.6 24 0.00083 33.9 7.7 77 331-442 2-92 (369)
442 1e3j_A NADP(H)-dependent ketos 58.6 17 0.00058 35.2 6.6 44 305-349 146-189 (352)
443 3fr7_A Putative ketol-acid red 58.6 20 0.00069 38.4 7.6 26 327-352 51-77 (525)
444 4h7p_A Malate dehydrogenase; s 58.5 11 0.00038 37.9 5.3 115 326-447 21-153 (345)
445 3uko_A Alcohol dehydrogenase c 58.2 18 0.0006 35.6 6.7 45 317-372 182-226 (378)
446 2i0z_A NAD(FAD)-utilizing dehy 58.2 8 0.00027 39.0 4.3 34 330-375 27-60 (447)
447 1cjc_A Protein (adrenodoxin re 58.1 10 0.00036 38.7 5.2 35 329-373 6-40 (460)
448 2yg5_A Putrescine oxidase; oxi 58.1 8.3 0.00028 38.1 4.3 35 329-375 5-39 (453)
449 3lov_A Protoporphyrinogen oxid 58.1 13 0.00044 37.1 5.8 37 329-375 4-40 (475)
450 1ojt_A Surface protein; redox- 58.0 8.9 0.0003 39.0 4.6 34 329-374 6-39 (482)
451 1o94_A Tmadh, trimethylamine d 58.0 9 0.00031 41.6 4.9 35 328-374 388-422 (729)
452 3nyc_A D-arginine dehydrogenas 58.0 5.9 0.0002 37.7 3.2 33 329-374 9-41 (381)
453 3n74_A 3-ketoacyl-(acyl-carrie 57.9 7.6 0.00026 35.6 3.8 77 325-420 5-94 (261)
454 3tpc_A Short chain alcohol deh 57.9 24 0.00082 32.3 7.2 36 326-373 4-40 (257)
455 3atr_A Conserved archaeal prot 57.9 5.7 0.00019 39.9 3.1 34 329-374 6-39 (453)
456 2i76_A Hypothetical protein; N 57.5 1.2 4.3E-05 42.2 -1.7 21 330-350 3-23 (276)
457 2gqf_A Hypothetical protein HI 57.5 7.4 0.00025 39.0 3.9 34 329-374 4-37 (401)
458 2b9w_A Putative aminooxidase; 57.3 9.6 0.00033 37.3 4.6 36 328-374 5-40 (424)
459 3nks_A Protoporphyrinogen oxid 57.2 8.4 0.00029 38.3 4.2 35 330-374 3-37 (477)
460 4dgk_A Phytoene dehydrogenase; 57.0 7.9 0.00027 38.8 4.0 22 330-351 2-23 (501)
461 1trb_A Thioredoxin reductase; 56.9 5.7 0.00019 37.0 2.8 34 328-373 4-37 (320)
462 3dk9_A Grase, GR, glutathione 56.9 8.5 0.00029 38.9 4.2 35 328-374 19-53 (478)
463 2r0c_A REBC; flavin adenine di 56.6 8.8 0.0003 39.9 4.4 34 329-374 26-59 (549)
464 1o5i_A 3-oxoacyl-(acyl carrier 56.6 40 0.0014 30.8 8.5 76 325-420 15-92 (249)
465 2iid_A L-amino-acid oxidase; f 56.5 13 0.00044 37.4 5.5 34 329-374 33-66 (498)
466 3fys_A Protein DEGV; fatty aci 56.5 6 0.0002 39.4 3.0 153 155-364 16-179 (315)
467 2cf5_A Atccad5, CAD, cinnamyl 56.3 25 0.00087 34.2 7.4 47 314-372 166-212 (357)
468 3sc6_A DTDP-4-dehydrorhamnose 56.2 7.1 0.00024 36.0 3.3 84 330-444 6-106 (287)
469 3csu_A Protein (aspartate carb 56.1 1.1E+02 0.0036 30.5 11.9 134 261-419 89-231 (310)
470 3ruf_A WBGU; rossmann fold, UD 56.1 7.6 0.00026 36.9 3.5 100 327-443 23-150 (351)
471 3kvo_A Hydroxysteroid dehydrog 56.0 28 0.00095 34.2 7.7 38 324-373 40-78 (346)
472 3cmm_A Ubiquitin-activating en 55.9 7.2 0.00024 44.8 3.9 42 326-373 422-463 (1015)
473 1f8f_A Benzyl alcohol dehydrog 55.8 27 0.00091 34.1 7.5 50 312-372 174-223 (371)
474 3k13_A 5-methyltetrahydrofolat 55.6 24 0.00083 34.9 7.2 79 261-372 94-179 (300)
475 2ehd_A Oxidoreductase, oxidore 55.5 12 0.00041 33.5 4.6 33 329-373 5-38 (234)
476 1fec_A Trypanothione reductase 55.5 12 0.00042 38.2 5.3 32 329-371 3-34 (490)
477 3pid_A UDP-glucose 6-dehydroge 55.5 29 0.00098 36.0 8.0 118 321-457 28-187 (432)
478 1wly_A CAAR, 2-haloacrylate re 55.4 20 0.00067 34.4 6.4 50 312-373 129-179 (333)
479 4gqa_A NAD binding oxidoreduct 55.3 25 0.00086 34.9 7.3 99 319-432 15-118 (412)
480 2bi7_A UDP-galactopyranose mut 55.3 10 0.00035 37.6 4.5 34 329-374 3-36 (384)
481 2gn4_A FLAA1 protein, UDP-GLCN 55.2 9 0.00031 37.2 4.0 101 325-444 17-142 (344)
482 1sb8_A WBPP; epimerase, 4-epim 55.1 13 0.00046 35.3 5.1 101 327-444 25-153 (352)
483 4e6p_A Probable sorbitol dehyd 54.9 6.7 0.00023 36.3 2.9 37 325-373 4-41 (259)
484 3k31_A Enoyl-(acyl-carrier-pro 54.9 18 0.00061 34.3 5.9 37 325-373 26-65 (296)
485 4b7c_A Probable oxidoreductase 54.7 26 0.00091 33.5 7.2 51 310-372 131-182 (336)
486 1zk4_A R-specific alcohol dehy 54.6 9.6 0.00033 34.4 3.8 37 325-373 2-39 (251)
487 2rgh_A Alpha-glycerophosphate 54.5 12 0.00041 39.4 5.1 35 329-375 32-66 (571)
488 2jl1_A Triphenylmethane reduct 54.5 5.9 0.0002 36.4 2.4 97 331-443 2-106 (287)
489 3kd9_A Coenzyme A disulfide re 54.4 8.5 0.00029 38.6 3.8 36 329-374 3-38 (449)
490 1p0f_A NADP-dependent alcohol 54.4 26 0.00088 34.2 7.2 35 327-372 190-224 (373)
491 1fmc_A 7 alpha-hydroxysteroid 54.4 20 0.00067 32.3 5.9 37 325-373 7-44 (255)
492 2fzw_A Alcohol dehydrogenase c 54.3 26 0.00089 34.1 7.2 45 317-372 179-223 (373)
493 1y0p_A Fumarate reductase flav 54.3 16 0.00055 38.0 5.9 40 325-376 122-161 (571)
494 2j3h_A NADP-dependent oxidored 54.2 24 0.00081 33.9 6.8 50 311-372 138-188 (345)
495 2ivd_A PPO, PPOX, protoporphyr 54.2 8.7 0.0003 38.3 3.8 34 329-374 16-49 (478)
496 1kyq_A Met8P, siroheme biosynt 54.1 8 0.00028 37.8 3.4 36 326-373 10-45 (274)
497 2ydy_A Methionine adenosyltran 53.9 27 0.00092 32.5 6.9 92 329-444 2-110 (315)
498 1v0j_A UDP-galactopyranose mut 53.7 13 0.00044 36.9 4.9 34 329-373 7-40 (399)
499 3l9w_A Glutathione-regulated p 53.6 7 0.00024 40.0 3.0 97 330-445 5-103 (413)
500 3h2s_A Putative NADH-flavin re 53.6 7.9 0.00027 34.2 3.0 93 331-444 2-105 (224)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=1.1e-165 Score=1304.59 Aligned_cols=414 Identities=56% Similarity=0.985 Sum_probs=408.6
Q ss_pred cccccccCCCCCcCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHhhcCCCchhHHHHhhhhhhhhhhhhHHHhhhc
Q 012398 49 SGYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYKLLIDN 128 (464)
Q Consensus 49 ~g~~~l~~p~~NkgtaFt~~ER~~lgl~GLlPp~v~t~e~Q~~r~~~~~~~~~~~l~Ky~~L~~L~~~Ne~Lfy~ll~~~ 128 (464)
+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|||.||++++++|+||+||++||++||+||||++.+|
T Consensus 2 ~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~~ 81 (555)
T 1gq2_A 2 KGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTSD 81 (555)
T ss_dssp CTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred ChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhcCcceeeehhhHhhh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeeccCCCCCCcccccchh
Q 012398 129 VEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGK 208 (464)
Q Consensus 129 ~~e~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG~~gm~I~~GK 208 (464)
++|+|||+||||||++|++||+|||+|+|+|+|++|+|+++++++|||.++|+|||||||||||||||||++||+|||||
T Consensus 82 ~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvGK 161 (555)
T 1gq2_A 82 IERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVGK 161 (555)
T ss_dssp HHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHHH
T ss_pred HHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCCCCccccchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhhhCCCCCCceeeEEeecCCCccccccCccccccccCCCChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCccHH
Q 012398 209 LSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAF 288 (464)
Q Consensus 209 l~Ly~a~gGI~P~~~lPV~LDvgTnne~Ll~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af 288 (464)
++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+++|||+++||||||++||||
T Consensus 162 l~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~~~af 241 (555)
T 1gq2_A 162 LALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANAF 241 (555)
T ss_dssp HHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHHH
T ss_pred HHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEeecccCCccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCceeecCccchhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEE
Q 012398 289 ELLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIW 368 (464)
Q Consensus 289 ~iL~ryr~~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~ 368 (464)
+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+++|++ +|+|+|||++|||
T Consensus 242 ~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~-~G~~~eeA~~~i~ 320 (555)
T 1gq2_A 242 RLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQK-EGVSKEEAIKRIW 320 (555)
T ss_dssp HHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHH-HTCCHHHHHTTEE
T ss_pred HHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHH-cCCChHHHhCcEE
Confidence 999999999999999999999999999999999999999999999999999999999999999998 4999999999999
Q ss_pred EEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 012398 369 LVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTS 448 (464)
Q Consensus 369 lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSNPt~ 448 (464)
|||++|||+++|. +|+++|++||++.++.++|+|||+++|||||||+|+++|+||+|||++||++|+|||||||||||+
T Consensus 321 ~~D~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~ 399 (555)
T 1gq2_A 321 MVDSKGLIVKGRA-SLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPTS 399 (555)
T ss_dssp EEETTEECBTTCS-SCCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSGG
T ss_pred EEECCCeeeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCCC
Confidence 9999999999995 599999999998777789999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHhccccCC
Q 012398 449 QSECTAEEAYTWSKVN 464 (464)
Q Consensus 449 ~~E~tpedA~~wT~g~ 464 (464)
++||+||||++||+|+
T Consensus 400 ~aE~~pe~a~~~t~G~ 415 (555)
T 1gq2_A 400 KAECTAEQLYKYTEGR 415 (555)
T ss_dssp GCSSCHHHHHHHTTTC
T ss_pred ccCcCHHHHHHhccCC
Confidence 9999999999999985
No 2
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=1.9e-165 Score=1305.89 Aligned_cols=416 Identities=53% Similarity=0.958 Sum_probs=409.4
Q ss_pred ccccccccCCCCCcCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHhhcCCCchhHHHHhhhhhhhhhhhhHHHhhh
Q 012398 48 ASGYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYKLLID 127 (464)
Q Consensus 48 ~~g~~~l~~p~~NkgtaFt~~ER~~lgl~GLlPp~v~t~e~Q~~r~~~~~~~~~~~l~Ky~~L~~L~~~Ne~Lfy~ll~~ 127 (464)
.+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|||.||++++++|+||+||++||++||+||||++.+
T Consensus 3 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 82 (564)
T 1pj3_A 3 EKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQD 82 (564)
T ss_dssp CCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhhcccceeehhhhhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeeccCCCCCCcccccch
Q 012398 128 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVG 207 (464)
Q Consensus 128 ~~~e~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG~~gm~I~~G 207 (464)
|++|+|||+||||||++|++||+|||+|+|+|+|++|+|+|+++|+|||.++|+|||||||||||||||||++||+||||
T Consensus 83 ~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~G~~gm~ipvG 162 (564)
T 1pj3_A 83 DIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVG 162 (564)
T ss_dssp CHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHHH
T ss_pred CHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCCCCCCcccceeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHhhhCCCCCCceeeEEeecCCCccccccCccccccccCCCChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCccH
Q 012398 208 KLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNA 287 (464)
Q Consensus 208 Kl~Ly~a~gGI~P~~~lPV~LDvgTnne~Ll~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~a 287 (464)
|++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+++|||+++||||||++|||
T Consensus 163 Kl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~~~a 242 (564)
T 1pj3_A 163 KLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNA 242 (564)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceeecCccchhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeE
Q 012398 288 FELLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKI 367 (464)
Q Consensus 288 f~iL~ryr~~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i 367 (464)
|+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+++|++ +|+|+|||++||
T Consensus 243 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~-~Gl~~eeA~~~i 321 (564)
T 1pj3_A 243 FRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVE-NGLSEQEAQKKI 321 (564)
T ss_dssp HHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHH-TTCCHHHHHHTE
T ss_pred HHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHH-cCCChHHhhCcE
Confidence 9999999999999999999999999999999999999999999999999999999999999999998 599999999999
Q ss_pred EEEcccCcccCCCccCCchhchhhhhhcCCC--CCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 012398 368 WLVDSKGLIVSSRKESLQHFKKPWAHEHAPI--KSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 445 (464)
Q Consensus 368 ~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~--~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN 445 (464)
||||++|||+++|.++|+++|++||++.++. ++|+|||+++|||||||+|+++|+||||||++||++|+|||||||||
T Consensus 322 ~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 401 (564)
T 1pj3_A 322 WMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSN 401 (564)
T ss_dssp EEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred EEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 9999999999999445999999999987766 79999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHhccccCC
Q 012398 446 PTSQSECTAEEAYTWSKVN 464 (464)
Q Consensus 446 Pt~~~E~tpedA~~wT~g~ 464 (464)
||+++||+||||++||+|+
T Consensus 402 Pt~~aE~~pe~a~~~t~G~ 420 (564)
T 1pj3_A 402 PTAQAECTAEEAYTLTEGR 420 (564)
T ss_dssp SGGGCSCCHHHHHHHTTTC
T ss_pred CCCccCcCHHHHHhhccCC
Confidence 9999999999999999984
No 3
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=7.5e-165 Score=1305.29 Aligned_cols=419 Identities=51% Similarity=0.900 Sum_probs=412.2
Q ss_pred ccccccccccccCCCCCcCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHhhcCCCchhHHHHhhhhhhhhhhhhHH
Q 012398 44 TVSVASGYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYK 123 (464)
Q Consensus 44 ~~~~~~g~~~l~~p~~NkgtaFt~~ER~~lgl~GLlPp~v~t~e~Q~~r~~~~~~~~~~~l~Ky~~L~~L~~~Ne~Lfy~ 123 (464)
..+..+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|||.||++++++|+||+||++||++||+||||
T Consensus 33 ~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfyr 112 (605)
T 1o0s_A 33 VTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYR 112 (605)
T ss_dssp CCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHCHHHHHH
T ss_pred cccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHhhcccchhhhh
Confidence 45568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCc--chHHHHHhcCCCCCeeEEEEecCceeeccCCCCCCc
Q 012398 124 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEK--GKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQG 201 (464)
Q Consensus 124 ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~--g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG~~g 201 (464)
++.+|++|+|||+||||||++|++||+|||+|+|+|+|++|+ |+++++++|||.++|+|||||||||||||||||++|
T Consensus 113 ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g 192 (605)
T 1o0s_A 113 VVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYG 192 (605)
T ss_dssp HHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSSCBTTTBCCGGGG
T ss_pred hhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEccccceecCCCCCCc
Confidence 999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred ccccchhhhHHhhhCCCCCCceeeEEeecCCCccccccCccccccccCCCChhhHHHHHHHHHHHHHHhcCCCeeeeeec
Q 012398 202 MGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFED 281 (464)
Q Consensus 202 m~I~~GKl~Ly~a~gGI~P~~~lPV~LDvgTnne~Ll~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIq~ED 281 (464)
|+|||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+++|||+++|||||
T Consensus 193 ~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~~fGp~~~I~~ED 272 (605)
T 1o0s_A 193 IGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFED 272 (605)
T ss_dssp GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHHHhCCCcEeeHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccHHHHHHHHcCCCceeecCccchhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChh
Q 012398 282 FANHNAFELLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIE 361 (464)
Q Consensus 282 f~~~~af~iL~ryr~~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~ 361 (464)
|++||||+||+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+++|++ +|+|++
T Consensus 273 f~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~-~Gl~~e 351 (605)
T 1o0s_A 273 FANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQN-EGISKE 351 (605)
T ss_dssp CCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHT-TTCCHH
T ss_pred cCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHH-cCCChh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987 599999
Q ss_pred hhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 012398 362 EARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIF 441 (464)
Q Consensus 362 eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIF 441 (464)
||++||||||++|||+++|. +|+++|++||++.++.++|+|||+++|||||||+|+++|+||+|||++||++|+|||||
T Consensus 352 eA~~~i~~vD~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 430 (605)
T 1o0s_A 352 EACNRIYLMDIDGLVTKNRK-EMNPRHVQFAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIF 430 (605)
T ss_dssp HHHHTEEEEETTEECBTTCS-SCCGGGTTTCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEE
T ss_pred hhhCeEEEEECCCceeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 99999999999999999995 59999999999877788999999999999999999999999999999999999999999
Q ss_pred EcCCCCCCCCCCHHHHhccccCC
Q 012398 442 ALSNPTSQSECTAEEAYTWSKVN 464 (464)
Q Consensus 442 aLSNPt~~~E~tpedA~~wT~g~ 464 (464)
||||||+++||+||||++||+|+
T Consensus 431 aLSNPt~~aE~~pe~a~~~t~G~ 453 (605)
T 1o0s_A 431 ALSNPTSKAECTAEEAYTFTNGA 453 (605)
T ss_dssp ECCSSGGGCSSCHHHHHHTTTSC
T ss_pred ECCCCCCCcCcCHHHHHhhccCC
Confidence 99999999999999999999985
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=1.2e-92 Score=737.34 Aligned_cols=273 Identities=32% Similarity=0.438 Sum_probs=244.5
Q ss_pred cccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeeccCCCCC-Ccccccchh
Q 012398 130 EELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGC-QGMGIPVGK 208 (464)
Q Consensus 130 ~e~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG~-~gm~I~~GK 208 (464)
.++|||+||||||++|++|+ +|++++++++.+| ++|||||||||||||||||+ +||||||||
T Consensus 58 ~~dLslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILGLGDiG~~agmpImeGK 120 (487)
T 3nv9_A 58 FNWFNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLGDGDVTPPGGLGVMEGK 120 (487)
T ss_dssp GGGHHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGGGBCCCGGGGHHHHHHH
T ss_pred HHHCeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeeeccccccccCCchhhhH
Confidence 36699999999999999985 3567777766665 58999999999999999999 589999999
Q ss_pred hhHHhhhCCCCCCceeeEEeecCCCccccccCccccccccCCCChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCccHH
Q 012398 209 LSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAF 288 (464)
Q Consensus 209 l~Ly~a~gGI~P~~~lPV~LDvgTnne~Ll~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af 288 (464)
++|||+||||| |||||||+||+| +++|| |+ +.|||+++.++||+ ||||||++||||
T Consensus 121 l~Lyk~~aGId---~lPI~LD~gt~~--~~~d~---------------de-fve~v~~~~P~fG~---InlEDf~ap~af 176 (487)
T 3nv9_A 121 ALLMKYLGGID---AVPICIDSKNKE--GKNDP---------------DA-VIEFVQRIQHTFGA---INLEDISQPNCY 176 (487)
T ss_dssp HHHHHHHHCCE---EEEEECCCBCTT--SCBCH---------------HH-HHHHHHHHGGGCSE---EEECSCCTTHHH
T ss_pred HHHHHhcCCCc---eeeeEEeCCCcc--ccCCH---------------HH-HHHHHHHhCCCCCe---ecHhhcCCchHH
Confidence 99999999999 999999999754 45664 33 44677777788877 999999999999
Q ss_pred HHHHHHcC--CCceeecCccchhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCe
Q 012398 289 ELLSKYSS--SHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKK 366 (464)
Q Consensus 289 ~iL~ryr~--~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~ 366 (464)
+||+|||+ +||||||||||||+|+||||+||+|++|++|+|+||||+|||+||+|||+||+. .|+++ +|
T Consensus 177 ~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~-----~G~~~----~~ 247 (487)
T 3nv9_A 177 KILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVT-----AGADP----KK 247 (487)
T ss_dssp HHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHH-----TTCCG----GG
T ss_pred HHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHH-----cCCCc----cc
Confidence 99999998 899999999999999999999999999999999999999999999999999975 59985 89
Q ss_pred EEEEcccCcccCCCccCC-----chhchhhhhhcC--CCCCHHHHHhcCCCcEEEeccCC-CCCCCHHHHHHHHcCCCCc
Q 012398 367 IWLVDSKGLIVSSRKESL-----QHFKKPWAHEHA--PIKSLLDAVKAIKPTMLMGTSGV-GKTFTKEVVEAMASFNEKP 438 (464)
Q Consensus 367 i~lvD~~GLl~~~r~~~l-----~~~k~~fa~~~~--~~~~L~e~v~~vkptvLIG~S~~-~g~ft~evv~~Ma~~~erP 438 (464)
|||||++|||+++|.+ | +++|.+||+..+ ..++|+|||++ +|||||+|++ +|+||+|||++|+ +||
T Consensus 248 i~l~D~~Gli~~~R~~-l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~--adVlIG~S~~~pg~ft~e~V~~Ma---~~P 321 (487)
T 3nv9_A 248 IVMFDSKGSLHNGRED-IKKDTRFYRKWEICETTNPSKFGSIAEACVG--ADVLISLSTPGPGVVKAEWIKSMG---EKP 321 (487)
T ss_dssp EEEEETTEECCTTCHH-HHHCGGGHHHHHHHHHSCTTCCCSHHHHHTT--CSEEEECCCSSCCCCCHHHHHTSC---SSC
T ss_pred EEEEeccccccCCcch-hhhhcccHHHHHHHHhcccccCCCHHHHHhc--CCEEEEecccCCCCCCHHHHHhhc---CCC
Confidence 9999999999999953 6 346678888653 46899999998 7999999976 7999999999997 899
Q ss_pred EEEEcCCCCCCCCCCHHHHhcc
Q 012398 439 VIFALSNPTSQSECTAEEAYTW 460 (464)
Q Consensus 439 IIFaLSNPt~~~E~tpedA~~w 460 (464)
||||||||| |||+||||+++
T Consensus 322 IIFaLSNPt--pEi~pe~A~~~ 341 (487)
T 3nv9_A 322 IVFCCANPV--PEIYPYEAKEA 341 (487)
T ss_dssp EEEECCSSS--CSSCHHHHHHT
T ss_pred EEEECCCCC--ccCCHHHHHHh
Confidence 999999999 79999999984
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=1.3e-86 Score=683.41 Aligned_cols=273 Identities=30% Similarity=0.446 Sum_probs=246.8
Q ss_pred hhHHHhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeeccCCCCC
Q 012398 120 LFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGC 199 (464)
Q Consensus 120 Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG~ 199 (464)
+++++..++. |+|||+||||||++|++|+ ++| ++++ +|+.++++|+|||||+|||||||+|+
T Consensus 24 ~~~~~~~~~~-~~l~i~YtP~V~~~c~~i~---~~p----------~~v~----~~t~~~~~V~VvTdG~~iLGLGD~G~ 85 (398)
T 2a9f_A 24 VQPKVDIKTK-HDLSIAYTPGVASVSSAIA---KDK----------TLAY----DLTTKKNTVAVISDGTAVLGLGDIGP 85 (398)
T ss_dssp EEESSCCSSH-HHHHHHSTTTTHHHHHHHH---HCG----------GGHH----HHSGGGTEEEEEECSSSCTTSCCCCH
T ss_pred EEEecccCCH-HHCeEEECchHHHHHHHHH---hCH----------HHHH----HhcccCCEEEEEECCccccCCCCccc
Confidence 4455566665 6699999999999999986 344 4544 58888999999999999999999999
Q ss_pred C-cccccchhhhHHhhhCCCCCCceeeEEeecCCCccccccCccccccccCCCChhhHHHHHHHHHHHHHHhcCCC-eee
Q 012398 200 Q-GMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEK-VLI 277 (464)
Q Consensus 200 ~-gm~I~~GKl~Ly~a~gGI~P~~~lPV~LDvgTnne~Ll~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~-~lI 277 (464)
+ |||||+||+.|||+||||| |+|||||+|| +||||++|+..| |. +.|
T Consensus 86 ~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~-p~F~~I 134 (398)
T 2a9f_A 86 EAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALA-PTFGGI 134 (398)
T ss_dssp HHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHG-GGCSEE
T ss_pred ccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcC-CceeEe
Confidence 8 8999999999999999999 9999999996 799999999888 77 789
Q ss_pred eeecCCCccHHHHHHHHcC--CCceeecCccchhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHh
Q 012398 278 QFEDFANHNAFELLSKYSS--SHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQ 355 (464)
Q Consensus 278 q~EDf~~~~af~iL~ryr~--~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~ 355 (464)
|||||++||||++|+|||+ +||||||||||||+|++||++||+|++|++++|+||||+|||+||+|||++++.+
T Consensus 135 ~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~---- 210 (398)
T 2a9f_A 135 NLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA---- 210 (398)
T ss_dssp EECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHH----
T ss_pred ccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHc----
Confidence 9999999999999999997 5999999999999999999999999999999999999999999999999999874
Q ss_pred cCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCC---CCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHH
Q 012398 356 TKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAP---IKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMA 432 (464)
Q Consensus 356 ~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~---~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma 432 (464)
|. ++||++|++|||+++|.++|+++|++||++.+. ..+|+|+|++ +|+|||+|+ ||+||+|+|++|+
T Consensus 211 -Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~--ADV~IG~Sa-pgl~T~EmVk~Ma 280 (398)
T 2a9f_A 211 -GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEG--ADIFIGVSA-PGVLKAEWISKMA 280 (398)
T ss_dssp -TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHT--TCSEEECCS-TTCCCHHHHHTSC
T ss_pred -CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhcc--CCEEEecCC-CCCCCHHHHHhhC
Confidence 63 799999999999999933599999999997543 4689999998 899999999 8899999999998
Q ss_pred cCCCCcEEEEcCCCCCCCCCCHHHHhcc
Q 012398 433 SFNEKPVIFALSNPTSQSECTAEEAYTW 460 (464)
Q Consensus 433 ~~~erPIIFaLSNPt~~~E~tpedA~~w 460 (464)
++|||||||||| |||+||||++|
T Consensus 281 ---~~pIIfalsNPt--~E~~pe~a~~~ 303 (398)
T 2a9f_A 281 ---ARPVIFAMANPI--PEIYPDEALEA 303 (398)
T ss_dssp ---SSCEEEECCSSS--CSSCHHHHHTT
T ss_pred ---CCCEEEECCCCC--ccCCHHHHHHh
Confidence 899999999999 99999999999
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=1.6e-83 Score=659.20 Aligned_cols=274 Identities=30% Similarity=0.447 Sum_probs=251.8
Q ss_pred hhhHHHhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeeccCCCC
Q 012398 119 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLG 198 (464)
Q Consensus 119 ~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG 198 (464)
..++++..++.++ |||+||||||++|++|+ ++|++ ++ +|+.++++|+|||||+|||||||+|
T Consensus 27 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~---~~p~~----------v~----~~t~~~~~V~VvTdg~~vLGlGD~G 88 (388)
T 1vl6_A 27 RTALPVEKVDRET-LSLLYTPGVADVARACA---EDPEK----------TY----VYTSRWNTVAVVSDGSAVLGLGNIG 88 (388)
T ss_dssp EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH---HCGGG----------HH----HHSGGGGEEEEEECSTTBTTTBSCC
T ss_pred EEEEeeecCCHHH-CeEEECchHHHHHHHHH---hCHHH----------HH----hhcccCCeEEEEECCccccCCCccc
Confidence 4567778888854 89999999999999976 55554 44 5888899999999999999999999
Q ss_pred CC-cccccchhhhHHhhhCCCCCCceeeEEeecCCCccccccCccccccccCCCChhhHHHHHHHHHHHHHHhcCCC-ee
Q 012398 199 CQ-GMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEK-VL 276 (464)
Q Consensus 199 ~~-gm~I~~GKl~Ly~a~gGI~P~~~lPV~LDvgTnne~Ll~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~-~l 276 (464)
++ |||||+||+.|||+||||| ++|||||+|+ +||||++|++.| |. ..
T Consensus 89 ~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~-p~f~~ 137 (388)
T 1vl6_A 89 PYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLE-PSFGG 137 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHcC-CcceE
Confidence 98 8999999999999999999 9999999996 699999999888 66 77
Q ss_pred eeeecCCCccHHHHHHHHcC--CCceeecCccchhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHH
Q 012398 277 IQFEDFANHNAFELLSKYSS--SHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSK 354 (464)
Q Consensus 277 Iq~EDf~~~~af~iL~ryr~--~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~ 354 (464)
||||||++|+||++|+|||+ +||||||||||||+|++||++||+|++|++++|+||||+|||+||++||++++.+
T Consensus 138 i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~--- 214 (388)
T 1vl6_A 138 INLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDL--- 214 (388)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eCHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhC---
Confidence 99999999999999999997 6999999999999999999999999999999999999999999999999999874
Q ss_pred hcCCChhhhcCeEEEEcccCcccCCCccC-CchhchhhhhhcCC---CCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHH
Q 012398 355 QTKAPIEEARKKIWLVDSKGLIVSSRKES-LQHFKKPWAHEHAP---IKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEA 430 (464)
Q Consensus 355 ~~G~s~~eA~~~i~lvD~~GLl~~~r~~~-l~~~k~~fa~~~~~---~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~ 430 (464)
| .++||++|++|||+.+|.+. |+++|++||++... ..+|+|+|++ +|+|||+|+ +|+||+|+|++
T Consensus 215 --G------~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~--ADVlIG~Sa-p~l~t~emVk~ 283 (388)
T 1vl6_A 215 --G------VKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEG--ADFFIGVSR-GNILKPEWIKK 283 (388)
T ss_dssp --T------CCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTT--CSEEEECSC-SSCSCHHHHTT
T ss_pred --C------CCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHcc--CCEEEEeCC-CCccCHHHHHh
Confidence 5 47999999999999999643 99999999997543 4689999998 999999999 78999999999
Q ss_pred HHcCCCCcEEEEcCCCCCCCCCCHHHHhcc
Q 012398 431 MASFNEKPVIFALSNPTSQSECTAEEAYTW 460 (464)
Q Consensus 431 Ma~~~erPIIFaLSNPt~~~E~tpedA~~w 460 (464)
|+ ++||||+||||| |||+||||++|
T Consensus 284 Ma---~~pIIfalSNPt--~E~~p~~a~~~ 308 (388)
T 1vl6_A 284 MS---RKPVIFALANPV--PEIDPELAREA 308 (388)
T ss_dssp SC---SSCEEEECCSSS--CSSCHHHHHHT
T ss_pred cC---CCCEEEEcCCCC--CCCCHHHHHHh
Confidence 97 799999999999 99999999999
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=3.4e-60 Score=493.76 Aligned_cols=274 Identities=31% Similarity=0.503 Sum_probs=241.4
Q ss_pred hhHHHhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeeccCCCCC
Q 012398 120 LFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGC 199 (464)
Q Consensus 120 Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG~ 199 (464)
.++++..++. |+|||+||||||++|++|++ |++++++ |+.++|+|+|||||+|||||||+|.
T Consensus 22 ~~~~~~~~~~-~~l~~~YtP~v~~~c~~~~~-------------~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG~ 83 (439)
T 2dvm_A 22 VIPKVSLESR-EELTLAYTPGVAEPCKEIAR-------------DPGKVYE----YTSKGNLVAVVSDGSRILGLGNIGP 83 (439)
T ss_dssp EEESSCCCSH-HHHHHHSTTTTHHHHHHHHH-------------CGGGHHH----HSSGGGEEEEEECSTTBTTTBCCCH
T ss_pred EEEeeccCCH-HHCeeEECchhHHHHHHHHH-------------CHHHHHh----hcccCcEEEEEECCCeEecccceec
Confidence 3455666666 66899999999999999873 6677775 7888899999999999999999999
Q ss_pred C-cccccchhhhHHhhhCCCCCCceeeEEeecCCCccccccCccccccccCCCChhhHHHHHHHHHHHHHHhcCCC-eee
Q 012398 200 Q-GMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEK-VLI 277 (464)
Q Consensus 200 ~-gm~I~~GKl~Ly~a~gGI~P~~~lPV~LDvgTnne~Ll~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~-~lI 277 (464)
+ ++|+|+||++||++||||| ++|+++|+.+ +|+|+++|+..+ |+ ..|
T Consensus 84 hS~sPvmh~ka~lf~~~gGid---~~yi~ldv~d---------------------------~de~~~~v~~l~-~~f~Gi 132 (439)
T 2dvm_A 84 LAGLPVMEGKALLFKRFGGVD---AFPIMIKEQE---------------------------PNKFIDIVKAIA-PTFGGI 132 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHCCE---EEEEECSCCS---------------------------HHHHHHHHHHTG-GGCSEE
T ss_pred cccCHHHHHHHHHHHHhCCCC---CeeeeeecCC---------------------------HHHHHHHHHHhC-ccCcEE
Confidence 7 7999999999999999999 9999999931 467777777644 33 349
Q ss_pred eeecCCCccHHHHHHHHcC--CCceeecCccchhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHh
Q 012398 278 QFEDFANHNAFELLSKYSS--SHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQ 355 (464)
Q Consensus 278 q~EDf~~~~af~iL~ryr~--~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~ 355 (464)
|||||+.|+||++|++|++ ++||||||+||||++.++|+++|++.+|++++++|+||+|||+||.+|+++|.+
T Consensus 133 nvED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~----- 207 (439)
T 2dvm_A 133 NLEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTE----- 207 (439)
T ss_dssp EECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHH-----
T ss_pred EEEeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHH-----
Confidence 9999999999999999986 799999999999999999999999999999999999999999999999999986
Q ss_pred cCCChhhhcCeEEEEc----ccCcccCCCccC---CchhchhhhhhcC---CCCCHHHHHhcCCCcEEEeccCCC-CCCC
Q 012398 356 TKAPIEEARKKIWLVD----SKGLIVSSRKES---LQHFKKPWAHEHA---PIKSLLDAVKAIKPTMLMGTSGVG-KTFT 424 (464)
Q Consensus 356 ~G~s~~eA~~~i~lvD----~~GLl~~~r~~~---l~~~k~~fa~~~~---~~~~L~e~v~~vkptvLIG~S~~~-g~ft 424 (464)
.|++ +++||++| ++||+++. .. +.+++++|++... ...+|.|+++. +|+|||+|+++ |.|+
T Consensus 208 ~G~~----~~~I~vvd~~~~R~G~~~~a--~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~--aDVlInaT~~~~G~~~ 279 (439)
T 2dvm_A 208 AGVK----PENVRVVELVNGKPRILTSD--LDLEKLFPYRGWLLKKTNGENIEGGPQEALKD--ADVLISFTRPGPGVIK 279 (439)
T ss_dssp TTCC----GGGEEEEEEETTEEEECCTT--SCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTT--CSEEEECSCCCSSSSC
T ss_pred cCCC----cCeEEEEEccCCCcCccccc--cchhHHHHHHHHHhhccccccccccHHHHhcc--CCEEEEcCCCccCCCC
Confidence 3765 27899999 99999887 24 7788888987533 24689999987 99999999985 8999
Q ss_pred HHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcc
Q 012398 425 KEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTW 460 (464)
Q Consensus 425 ~evv~~Ma~~~erPIIFaLSNPt~~~E~tpedA~~w 460 (464)
+++++.|+ ++||||+||||+ +||.+++|.+|
T Consensus 280 ~e~v~~m~---~~~iVfDLynP~--~t~~~~~A~~~ 310 (439)
T 2dvm_A 280 PQWIEKMN---EDAIVFPLANPV--PEILPEEAKKA 310 (439)
T ss_dssp HHHHTTSC---TTCEEEECCSSS--CSSCHHHHHHH
T ss_pred hHHHHhcC---CCCEEEECCCCC--CcchHHHHHHc
Confidence 99999996 799999999999 99999999998
No 8
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.87 E-value=7e-09 Score=108.35 Aligned_cols=130 Identities=17% Similarity=0.201 Sum_probs=105.6
Q ss_pred CCCcee----------ecCccchhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcC
Q 012398 296 SSHLVF----------NDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARK 365 (464)
Q Consensus 296 ~~~~~F----------nDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~ 365 (464)
..+|+| +|+++||+.++++|++. .++..|.+.+|+|+|.|..|.++|+.+... |+
T Consensus 171 L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~r---atg~~L~GktVgIiG~G~IG~~vA~~Lka~-----Ga------- 235 (436)
T 3h9u_A 171 LTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR---ATDVMIAGKTACVCGYGDVGKGCAAALRGF-----GA------- 235 (436)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH---HHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCceEeechhhhhhhhhccccchHHHHHHHHH---hcCCcccCCEEEEEeeCHHHHHHHHHHHHC-----CC-------
Confidence 589999 89999999999999965 469999999999999999999999998653 53
Q ss_pred eEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 012398 366 KIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 366 ~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLS 444 (464)
+++++|++. .+...|. ..-...+|.|+++. +|++|.+++..+.++++.++.|. +..||+-+|
T Consensus 236 ~Viv~D~~p------------~~a~~A~~~G~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK---~gAIVINvg 298 (436)
T 3h9u_A 236 RVVVTEVDP------------INALQAAMEGYQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR---DDAIVCNIG 298 (436)
T ss_dssp EEEEECSCH------------HHHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC---TTEEEEECS
T ss_pred EEEEECCCh------------hhhHHHHHhCCeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC---CCcEEEEeC
Confidence 688888732 1111121 11123589999997 99999888877899999999996 789999999
Q ss_pred CCCCCCCCCHHHHhc
Q 012398 445 NPTSQSECTAEEAYT 459 (464)
Q Consensus 445 NPt~~~E~tpedA~~ 459 (464)
++. .|+.++...+
T Consensus 299 Rg~--vEID~~~L~~ 311 (436)
T 3h9u_A 299 HFD--TEIQVAWLKA 311 (436)
T ss_dssp SSG--GGBCHHHHHH
T ss_pred CCC--CccCHHHHHh
Confidence 998 9999987654
No 9
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.83 E-value=2.4e-08 Score=104.23 Aligned_cols=168 Identities=10% Similarity=0.197 Sum_probs=123.8
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCccHHHH-------H--------------HHHc-------CCCcee-
Q 012398 251 ATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFEL-------L--------------SKYS-------SSHLVF- 301 (464)
Q Consensus 251 ~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af~i-------L--------------~ryr-------~~~~~F- 301 (464)
.+-++|...+++.+.+ ..++|+.+| |-+..=...+ + .||+ ..+|+|
T Consensus 112 ~~~~ey~~~~~~~~~~--~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~ 186 (435)
T 3gvp_A 112 ESEDDFWWCIDRCVNV--EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMN 186 (435)
T ss_dssp CCHHHHHHHHHHHHCB--TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEEE
T ss_pred CCHHHHHHHHHHHHhc--cCCCCcEEE---ecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEEE
Confidence 3567888877776642 335676555 4343222222 1 3443 269999
Q ss_pred ---------ecCccchhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 012398 302 ---------NDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (464)
Q Consensus 302 ---------nDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~ 372 (464)
+|+++||+.++++|+.++ ++..|.+.+++|+|+|..|.++|+.+.. .|+ +++.+|+
T Consensus 187 vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~Lra-----~Ga-------~Viv~D~ 251 (435)
T 3gvp_A 187 VNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAALKA-----MGS-------IVYVTEI 251 (435)
T ss_dssp CTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECS
T ss_pred ecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecCCEEEEEeeCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 899999999999999765 6899999999999999999999998864 364 5888886
Q ss_pred cCcccCCCccCCchhchhhhhh-cCCCCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCC
Q 012398 373 KGLIVSSRKESLQHFKKPWAHE-HAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSE 451 (464)
Q Consensus 373 ~GLl~~~r~~~l~~~k~~fa~~-~~~~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSNPt~~~E 451 (464)
+.. +...|.. .-...+|.|+++. .|++|.+++..++++++.++.|. +..||+-.+++. .|
T Consensus 252 dp~------------ra~~A~~~G~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK---~gailINvgrg~--~E 312 (435)
T 3gvp_A 252 DPI------------CALQACMDGFRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK---NSCIVCNMGHSN--TE 312 (435)
T ss_dssp CHH------------HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC---TTEEEEECSSTT--TT
T ss_pred Chh------------hhHHHHHcCCEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC---CCcEEEEecCCC--cc
Confidence 421 1111211 1123579999997 99999998888899999999996 789999999997 88
Q ss_pred CCHHHH
Q 012398 452 CTAEEA 457 (464)
Q Consensus 452 ~tpedA 457 (464)
+..+..
T Consensus 313 Id~~~L 318 (435)
T 3gvp_A 313 IDVASL 318 (435)
T ss_dssp BTGGGG
T ss_pred CCHHHH
Confidence 887654
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.61 E-value=2.3e-08 Score=102.64 Aligned_cols=215 Identities=19% Similarity=0.237 Sum_probs=132.4
Q ss_pred CcchHHHHHhcCCCCCeeEEEEecCceeeccCCCCCC--cccccchhhhHHhhhCCCCCCceeeEEeecCCCccccccCc
Q 012398 164 EKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDE 241 (464)
Q Consensus 164 d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG~~--gm~I~~GKl~Ly~a~gGI~P~~~lPV~LDvgTnne~Ll~Dp 241 (464)
++..++++.++ +.+|+|.++++..+|++|.+.. |..|+.+ ..+|. | +++|.+.+ |
T Consensus 26 tP~~v~~L~~~----G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk~--------p 82 (401)
T 1x13_A 26 TPKTVEQLLKL----GFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVNA--------P 82 (401)
T ss_dssp CHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSSC--------C
T ss_pred CHHHHHHHHHC----CCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeCC--------C
Confidence 45666666653 4689999999999999999975 8899888 67776 2 56776653 2
Q ss_pred cccccccCCCChhhHHHHHHHHHHHHHH---hcCCCeeeeeecCCCccHHHHHHHHc-CCCceee-cCc------c----
Q 012398 242 FYIGLRQKRATGQEYAELLQEFMTAVKQ---NYGEKVLIQFEDFANHNAFELLSKYS-SSHLVFN-DDI------Q---- 306 (464)
Q Consensus 242 ~YlG~r~~R~~g~~y~~~idefv~av~~---~fGp~~lIq~EDf~~~~af~iL~ryr-~~~~~Fn-DDi------Q---- 306 (464)
..+.++.+++ .|+- ++.++ ++. .++.++ ..|++|+ +.+ |
T Consensus 83 ------------------~~~~i~~l~~~~~li~~---~~~~~--d~~---~~~al~~~gI~v~~~e~v~~~~~a~~l~~ 136 (401)
T 1x13_A 83 ------------------LDDEIALLNPGTTLVSF---IWPAQ--NPE---LMQKLAERNVTVMAMDSVPRISRAQSLDA 136 (401)
T ss_dssp ------------------CHHHHTTCCTTCEEEEC---CCGGG--CHH---HHHHHHHTTCEEEEGGGCCCSGGGGGGCH
T ss_pred ------------------CHHHHHHhcCCCcEEEE---ecCCC--CHH---HHHHHHHCCCEEEEeehhhhhhhhcccch
Confidence 1244444432 2211 33322 233 334443 5677773 222 2
Q ss_pred chhHHHHHHHHHHHHHhC----C----------CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 012398 307 GTASVVLAGILSALKLVG----G----------TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (464)
Q Consensus 307 GTaaV~LAgll~Alk~~g----~----------~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~ 372 (464)
.+....+|| .+|++..+ + .+...+|+|+|+|.+|.++++++.. .|. +++++|+
T Consensus 137 l~~~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~v~D~ 203 (401)
T 1x13_A 137 LSSMANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANS-----LGA-------IVRAFDT 203 (401)
T ss_dssp HHHHHHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECS
T ss_pred HHHHHHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEcC
Confidence 455556665 44444332 2 2568999999999999999998764 352 5889998
Q ss_pred cCcccCCCccCCc------------hhchhhhhhcCC------CCCHHHHHhcCCCcEEEeccCCC-----CCCCHHHHH
Q 012398 373 KGLIVSSRKESLQ------------HFKKPWAHEHAP------IKSLLDAVKAIKPTMLMGTSGVG-----KTFTKEVVE 429 (464)
Q Consensus 373 ~GLl~~~r~~~l~------------~~k~~fa~~~~~------~~~L~e~v~~vkptvLIG~S~~~-----g~ft~evv~ 429 (464)
+.-..... ..+. ..+..|++.... ..+|.+.++. .|++|++...+ .++++++++
T Consensus 204 ~~~~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~ 280 (401)
T 1x13_A 204 RPEVKEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVD 280 (401)
T ss_dssp CGGGHHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHH
T ss_pred CHHHHHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHh
Confidence 64321100 0010 000112211100 0147788886 99999995333 578999999
Q ss_pred HHHcCCCCcEEEEcCCC
Q 012398 430 AMASFNEKPVIFALSNP 446 (464)
Q Consensus 430 ~Ma~~~erPIIFaLSNP 446 (464)
.|. +..+|+-+|+|
T Consensus 281 ~mk---~g~vIVdva~~ 294 (401)
T 1x13_A 281 SMK---AGSVIVDLAAQ 294 (401)
T ss_dssp TSC---TTCEEEETTGG
T ss_pred cCC---CCcEEEEEcCC
Confidence 996 68899999986
No 11
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=98.20 E-value=3.9e-06 Score=88.88 Aligned_cols=132 Identities=14% Similarity=0.212 Sum_probs=101.5
Q ss_pred CCCcee----------ecCccchhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcC
Q 012398 296 SSHLVF----------NDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARK 365 (464)
Q Consensus 296 ~~~~~F----------nDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~ 365 (464)
..+|+| +|+++||+..++.++. |.++..|.+.+++|.|+|..|.+||+.+.. .|.
T Consensus 225 L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa-----~GA------- 289 (488)
T 3ond_A 225 LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVAGYGDVGKGCAAALKQ-----AGA------- 289 (488)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------
T ss_pred CCCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccCCEEEEECCCHHHHHHHHHHHH-----CCC-------
Confidence 479999 7899999999999886 789999999999999999999999988765 362
Q ss_pred eEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 012398 366 KIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 445 (464)
Q Consensus 366 ~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN 445 (464)
+++++|++.. + ... .+...-...++.++++. .|+++-.++..++++.+.++.|. +..||+-.++
T Consensus 290 ~Viv~D~~~~----~---a~~----Aa~~g~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk---~gaiVvNaG~ 353 (488)
T 3ond_A 290 RVIVTEIDPI----C---ALQ----ATMEGLQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK---NNAIVCNIGH 353 (488)
T ss_dssp EEEEECSCHH----H---HHH----HHHTTCEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC---TTEEEEESSS
T ss_pred EEEEEcCCHH----H---HHH----HHHhCCccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC---CCeEEEEcCC
Confidence 6888887421 0 100 01111123467777775 99999988888899999999996 7889999999
Q ss_pred CCCCCCCCHHHHhcc
Q 012398 446 PTSQSECTAEEAYTW 460 (464)
Q Consensus 446 Pt~~~E~tpedA~~w 460 (464)
+. .|+..++.-.|
T Consensus 354 ~~--~Ei~~~~l~~~ 366 (488)
T 3ond_A 354 FD--NEIDMLGLETH 366 (488)
T ss_dssp TT--TTBTHHHHHTS
T ss_pred CC--cccchHHHHHh
Confidence 85 78888776554
No 12
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.77 E-value=9.8e-05 Score=77.74 Aligned_cols=127 Identities=17% Similarity=0.203 Sum_probs=97.8
Q ss_pred CCCcee----------ecCccchhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcC
Q 012398 296 SSHLVF----------NDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARK 365 (464)
Q Consensus 296 ~~~~~F----------nDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~ 365 (464)
..+|+| .|...||+-.++.|+. |.++..|.+.+++|+|.|..|.++|+.+.. .|+
T Consensus 207 L~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~GKTVgVIG~G~IGr~vA~~lra-----fGa------- 271 (464)
T 3n58_A 207 LPFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAGKVAVVCGYGDVGKGSAQSLAG-----AGA------- 271 (464)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------
T ss_pred CCCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccCCEEEEECcCHHHHHHHHHHHH-----CCC-------
Confidence 479999 6788999999988885 567999999999999999999999998864 253
Q ss_pred eEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 012398 366 KIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 366 ~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLS 444 (464)
+++++|.+.. ....|. ..-...+|.|+++. +|+++-+++..++|+++.++.|. +..||.-.+
T Consensus 272 ~Viv~d~dp~------------~a~~A~~~G~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK---~GAILINvG 334 (464)
T 3n58_A 272 RVKVTEVDPI------------CALQAAMDGFEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK---DMCIVGNIG 334 (464)
T ss_dssp EEEEECSSHH------------HHHHHHHTTCEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC---TTEEEEECS
T ss_pred EEEEEeCCcc------------hhhHHHhcCceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC---CCeEEEEcC
Confidence 6887775321 011111 11123579999997 99999988777899999999996 788999888
Q ss_pred CCCCCCCCCHHH
Q 012398 445 NPTSQSECTAEE 456 (464)
Q Consensus 445 NPt~~~E~tped 456 (464)
+.. .|+..+.
T Consensus 335 Rgd--vEID~~a 344 (464)
T 3n58_A 335 HFD--NEIQVAA 344 (464)
T ss_dssp SST--TTBTCGG
T ss_pred CCC--cccCHHH
Confidence 877 6666543
No 13
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.65 E-value=0.00061 Score=68.96 Aligned_cols=229 Identities=15% Similarity=0.125 Sum_probs=121.9
Q ss_pred CcchHHHHHhcCCCCCeeEEEEecCceeeccCCCCCC--cccccchhhhHHhhhCCCCCCceeeEEeecCCC-----ccc
Q 012398 164 EKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLSLYTALGGLRPSACLPITIDVGTN-----NEQ 236 (464)
Q Consensus 164 d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG~~--gm~I~~GKl~Ly~a~gGI~P~~~lPV~LDvgTn-----ne~ 236 (464)
.+..++++.+ .+.+|+|.++++...|+.|.... |..|+.++..++ ++.| ++|.+.+- .++
T Consensus 19 ~P~~v~~L~~----~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~ad------iil~v~~p~~~~~~~~ 85 (384)
T 1l7d_A 19 SPEVVKKLVG----LGFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQAD------VVWKVQRPMTAEEGTD 85 (384)
T ss_dssp CHHHHHHHHH----TTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSCS------EEEEEECCCCGGGSCC
T ss_pred CHHHHHHHHh----CCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCCC------EEEEecCcccccCCHH
Confidence 3456666665 35789999999999999998764 778888877666 3333 56666532 111
Q ss_pred c---c-cCccccccccCCCChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCccHHHHHHHHcCCCceeecCccchhHHH
Q 012398 237 L---L-NDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFNDDIQGTASVV 312 (464)
Q Consensus 237 L---l-~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~FnDDiQGTaaV~ 312 (464)
. + ..-.+++.-+.- ++. +.++++.+ -|- .++++|-+....+ ...+++|+ ....
T Consensus 86 ~i~~l~~~~~~i~~~~~~-----~~~---~~~~~~~~-~gi-~~~~~e~~~~~~~-------~~~l~~l~------~~a~ 142 (384)
T 1l7d_A 86 EVALIKEGAVLMCHLGAL-----TNR---PVVEALTK-RKI-TAYAMELMPRISR-------AQSMDILS------SQSN 142 (384)
T ss_dssp GGGGSCTTCEEEEECCGG-----GCH---HHHHHHHH-TTC-EEEEGGGCCCSGG-------GGGGCHHH------HHHH
T ss_pred HHHhhccCCEEEEEeccc-----CCH---HHHHHHHH-CCC-EEEEecccccccc-------ccccchhh------HHHH
Confidence 1 1 112222222221 111 11222222 111 2233322211000 00122222 1112
Q ss_pred HH---HHHHHHHHhCC----------CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCC
Q 012398 313 LA---GILSALKLVGG----------TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSS 379 (464)
Q Consensus 313 LA---gll~Alk~~g~----------~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~ 379 (464)
+| +++.+.+..++ .+...+|+|+|+|.+|.++++++.. .| | +++++|++.--...
T Consensus 143 ~ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~-----~G-----a--~V~~~d~~~~~~~~ 210 (384)
T 1l7d_A 143 LAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKR-----LG-----A--VVMATDVRAATKEQ 210 (384)
T ss_dssp HHHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEECSCSTTHHH
T ss_pred HHHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHH-----CC-----C--EEEEEeCCHHHHHH
Confidence 22 55666666554 6789999999999999999998754 35 2 48999986321000
Q ss_pred CccCCc-------h-------hchhhhhhcCC------CCCHHHHHhcCCCcEEEeccCC-----CCCCCHHHHHHHHcC
Q 012398 380 RKESLQ-------H-------FKKPWAHEHAP------IKSLLDAVKAIKPTMLMGTSGV-----GKTFTKEVVEAMASF 434 (464)
Q Consensus 380 r~~~l~-------~-------~k~~fa~~~~~------~~~L~e~v~~vkptvLIG~S~~-----~g~ft~evv~~Ma~~ 434 (464)
. ..+. . .+-.|++...+ ...+.+.++. +|++|.++.. +.+++++.++.|.
T Consensus 211 ~-~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~mk-- 285 (384)
T 1l7d_A 211 V-ESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMK-- 285 (384)
T ss_dssp H-HHTTCEECCC-----------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSC--
T ss_pred H-HHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC--
Confidence 0 0010 0 00011111000 0127777875 9999998822 3468999999996
Q ss_pred CCCcEEEEcCCC
Q 012398 435 NEKPVIFALSNP 446 (464)
Q Consensus 435 ~erPIIFaLSNP 446 (464)
+..+|+-+|-+
T Consensus 286 -~g~vivdva~~ 296 (384)
T 1l7d_A 286 -PGSVIIDLAVE 296 (384)
T ss_dssp -TTCEEEETTGG
T ss_pred -CCCEEEEEecC
Confidence 67899989853
No 14
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.47 E-value=0.00011 Score=76.06 Aligned_cols=110 Identities=16% Similarity=0.191 Sum_probs=71.8
Q ss_pred CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCc--------------hhchhh
Q 012398 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ--------------HFKKPW 391 (464)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~--------------~~k~~f 391 (464)
.+...||+|+|+|.+|.++|+++... |. +++++|++.-......+ +. +.+..|
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~y 253 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGY 253 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTTHHHHHHH-TTCEECCCCC------------
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHHHHHHHHH-cCCceeecccccccccccccch
Confidence 36789999999999999999988653 52 68999997542111100 10 001124
Q ss_pred hhhcCC------CCCHHHHHhcCCCcEEEeccCC-----CCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCC
Q 012398 392 AHEHAP------IKSLLDAVKAIKPTMLMGTSGV-----GKTFTKEVVEAMASFNEKPVIFALSN-PTSQSECT 453 (464)
Q Consensus 392 a~~~~~------~~~L~e~v~~vkptvLIG~S~~-----~g~ft~evv~~Ma~~~erPIIFaLSN-Pt~~~E~t 453 (464)
++...+ ..+|.|+++. +|++|++... +.+||+|+++.|. +.++|+-+|- |-...|.+
T Consensus 254 a~e~s~~~~~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk---~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 254 AKEMSGEYQVKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK---PGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp -----CHHHHHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC---TTCEEEETTGGGTCSBTTC
T ss_pred hhhcchhhhhhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC---CCCEEEEEeCCCCCCcccc
Confidence 432111 1379999997 9999998533 3479999999996 7899999994 33344554
No 15
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.15 E-value=0.00045 Score=71.07 Aligned_cols=103 Identities=20% Similarity=0.181 Sum_probs=66.8
Q ss_pred CCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCcc------CCc---hhchhhhhhc--
Q 012398 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKE------SLQ---HFKKPWAHEH-- 395 (464)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~------~l~---~~k~~fa~~~-- 395 (464)
+...||+|+|+|.+|..+|+.+... |. +++++|++.-....-.+ .++ .....|++..
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~ 249 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSE 249 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGGGHHHHHHTTCEECCCC-------------CH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhH
Confidence 5789999999999999999988653 52 68999987421110000 000 0001122100
Q ss_pred ----CCCCCHHHHHhcCCCcEEEeccCC-----CCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 012398 396 ----APIKSLLDAVKAIKPTMLMGTSGV-----GKTFTKEVVEAMASFNEKPVIFALSNP 446 (464)
Q Consensus 396 ----~~~~~L~e~v~~vkptvLIG~S~~-----~g~ft~evv~~Ma~~~erPIIFaLSNP 446 (464)
....+|.++++. +|++|++... +.+||+++++.|. +..+|+-+|=+
T Consensus 250 ~~~~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk---pGsVIVDvA~d 304 (381)
T 3p2y_A 250 AERAQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ---PGSVVVDLAGE 304 (381)
T ss_dssp HHHHHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC---TTCEEEETTGG
T ss_pred HHHhhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC---CCcEEEEEeCC
Confidence 012368899987 9999997433 3479999999996 78899999854
No 16
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.93 E-value=0.0072 Score=63.05 Aligned_cols=178 Identities=19% Similarity=0.174 Sum_probs=126.8
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCc-cHH-HHHHHHcC---C-C-cee----------ecCccchhHHHH
Q 012398 251 ATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANH-NAF-ELLSKYSS---S-H-LVF----------NDDIQGTASVVL 313 (464)
Q Consensus 251 ~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~-~af-~iL~ryr~---~-~-~~F----------nDDiQGTaaV~L 313 (464)
.+-.|-..|...|++++.+.-||+.-|-=+|++.. .-. -+.+.|+. . - .++ .|--.-||-=+.
T Consensus 126 ~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~ 205 (424)
T 3k92_A 126 MSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGVT 205 (424)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHHH
Confidence 34566777889999999998899888888999763 222 25567742 1 0 122 233345888888
Q ss_pred HHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhc-hhhh
Q 012398 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFK-KPWA 392 (464)
Q Consensus 314 Agll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k-~~fa 392 (464)
.++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +-+-+.|++|-|++.. .++... +.+.
T Consensus 206 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~--GlD~~~l~~~~ 272 (424)
T 3k92_A 206 ICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPD--GLDIPYLLDKR 272 (424)
T ss_dssp HHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTT--CCCHHHHHHHC
T ss_pred HHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHH
Confidence 88899999999999999999999999999999998763 42 3467999999999764 344322 1121
Q ss_pred hhcC-------CCCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 012398 393 HEHA-------PIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 447 (464)
Q Consensus 393 ~~~~-------~~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN-Pt 447 (464)
.... ..-+-.+. -.++.||||=+..+ +.+|++-++.+ .-.+|.--+| |+
T Consensus 273 ~~~g~i~~~~a~~~~~~~i-~~~~~DIliPcA~~-n~I~~~~a~~l----~ak~V~EgAN~p~ 329 (424)
T 3k92_A 273 DSFGMVTNLFTDVITNEEL-LEKDCDILVPAAIS-NQITAKNAHNI----QASIVVERANGPT 329 (424)
T ss_dssp CSSSCCGGGCSCCBCHHHH-HHSCCSEEEECSCS-SCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HHhCCCCCCCcEEecCccc-eeccccEEeecCcc-cccChhhHhhc----CceEEEcCCCCCC
Confidence 1111 11133444 35689999988875 69999998887 5789998898 65
No 17
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.92 E-value=0.0076 Score=62.76 Aligned_cols=177 Identities=14% Similarity=0.128 Sum_probs=123.9
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCcc--HHHHHHHHcC---C--Ccee----------ecCccchhHHHH
Q 012398 251 ATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHN--AFELLSKYSS---S--HLVF----------NDDIQGTASVVL 313 (464)
Q Consensus 251 ~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~--af~iL~ryr~---~--~~~F----------nDDiQGTaaV~L 313 (464)
.+-.|-..|...|++++.+.-||..-|-=+|++..- ---+.+.|+. . -.++ .+.-.-||-=+.
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 202 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGAL 202 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHH
Confidence 345567778899999999999999999999998742 2235566631 1 0111 222234766677
Q ss_pred HHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEcccCcccCCCccCCchhc-hhh
Q 012398 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIW-LVDSKGLIVSSRKESLQHFK-KPW 391 (464)
Q Consensus 314 Agll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~-lvD~~GLl~~~r~~~l~~~k-~~f 391 (464)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .| -+++ +.|++|-|++.. .++..+ +.+
T Consensus 203 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~-----~G-------akVVavsD~~G~i~dp~--Gld~~~l~~~ 268 (419)
T 3aoe_E 203 LVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAER-----LG-------MRVVAVATSMGGMYAPE--GLDVAEVLSA 268 (419)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEEETTEEEECTT--CCCHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CC-------CEEEEEEcCCCeEECCC--CCCHHHHHHH
Confidence 7788888999999999999999999999999998865 35 2566 999999998764 344322 122
Q ss_pred hhhcCCCC----CHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 012398 392 AHEHAPIK----SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 447 (464)
Q Consensus 392 a~~~~~~~----~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN-Pt 447 (464)
......+. +-.+ +-.++.||||=++. .+.+|++-.+.+ .-.||.--+| |+
T Consensus 269 ~~~~g~v~~~~~~~~e-~~~~~~DVliP~A~-~n~i~~~~A~~l----~ak~V~EgAN~p~ 323 (419)
T 3aoe_E 269 YEATGSLPRLDLAPEE-VFGLEAEVLVLAAR-EGALDGDRARQV----QAQAVVEVANFGL 323 (419)
T ss_dssp HHHHSSCSCCCBCTTT-GGGSSCSEEEECSC-TTCBCHHHHTTC----CCSEEEECSTTCB
T ss_pred HHhhCCcceeeccchh-hhccCceEEEeccc-ccccccchHhhC----CceEEEECCCCcC
Confidence 22211110 1122 34578999998876 559999999888 5679999998 65
No 18
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.90 E-value=0.064 Score=56.40 Aligned_cols=182 Identities=16% Similarity=0.088 Sum_probs=125.9
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCccH--HHHHHHH---cCC-Ccee----------ecCccchhHHHHH
Q 012398 251 ATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNA--FELLSKY---SSS-HLVF----------NDDIQGTASVVLA 314 (464)
Q Consensus 251 ~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~a--f~iL~ry---r~~-~~~F----------nDDiQGTaaV~LA 314 (464)
.+-.|-..|...|+..+.+..||..=|--.|++..-. --+.+.| +.. -+|| .+.-.-||-=+.-
T Consensus 141 ~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~~ 220 (450)
T 4fcc_A 141 KSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVY 220 (450)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeHHH
Confidence 4567788889999999999999999999999975332 1234444 332 2232 1223347777788
Q ss_pred HHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhh
Q 012398 315 GILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE 394 (464)
Q Consensus 315 gll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~ 394 (464)
++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=|-+-|++|-|++.. .++..+.....+
T Consensus 221 ~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~--Gid~e~l~~l~e 287 (450)
T 4fcc_A 221 FTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES--GFTKEKLARLIE 287 (450)
T ss_dssp HHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC--CCCHHHHHHHHH
Confidence 8889999999999999999999999999999998753 52 4566789999998753 355443222111
Q ss_pred --cCCCCCHHHH-------------HhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 012398 395 --HAPIKSLLDA-------------VKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 447 (464)
Q Consensus 395 --~~~~~~L~e~-------------v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN-Pt 447 (464)
......+.+. +-.++.|||+=+..+ +.+|++-++.+.+ +.-.+|.--+| |+
T Consensus 288 ~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl~-~~I~~~~a~~L~a-~g~k~IaEgAN~p~ 354 (450)
T 4fcc_A 288 IKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQ-NELDVDAAHQLIA-NGVKAVAEGANMPT 354 (450)
T ss_dssp HHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSCT-TCBCHHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HhcccCCccccccccCCcEEecCcccccCCccEEeecccc-ccccHHHHHHHHh-cCceEEecCCCCCC
Confidence 0111122221 234689999988875 5999999999964 22457887788 65
No 19
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.80 E-value=0.014 Score=56.52 Aligned_cols=115 Identities=17% Similarity=0.217 Sum_probs=78.2
Q ss_pred chhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCch
Q 012398 307 GTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH 386 (464)
Q Consensus 307 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~ 386 (464)
.+-+|+=.++..++...+..+.+.+++|+|+|..|..+|+.+.. .|+ +++.+|+.. .+ ...
T Consensus 133 ~~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~-----~G~-------~V~~~dr~~----~~---~~~ 193 (293)
T 3d4o_A 133 NSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAA-----LGA-------KVKVGARES----DL---LAR 193 (293)
T ss_dssp HHHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSH----HH---HHH
T ss_pred ccHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHH
Confidence 34455555666666777889999999999999999999998864 253 688888742 11 110
Q ss_pred hchhhhhhcCCCCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC-CCC
Q 012398 387 FKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS-NPT 447 (464)
Q Consensus 387 ~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLS-NPt 447 (464)
.+ .+--..-...+|.++++. .|++|-.. +.+.++++.++.|. +..+|+=+| +|.
T Consensus 194 ~~-~~g~~~~~~~~l~~~l~~--aDvVi~~~-p~~~i~~~~l~~mk---~~~~lin~ar~~~ 248 (293)
T 3d4o_A 194 IA-EMGMEPFHISKAAQELRD--VDVCINTI-PALVVTANVLAEMP---SHTFVIDLASKPG 248 (293)
T ss_dssp HH-HTTSEEEEGGGHHHHTTT--CSEEEECC-SSCCBCHHHHHHSC---TTCEEEECSSTTC
T ss_pred HH-HCCCeecChhhHHHHhcC--CCEEEECC-ChHHhCHHHHHhcC---CCCEEEEecCCCC
Confidence 00 010000011368888876 99999765 45799999999985 567888888 454
No 20
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.77 E-value=0.013 Score=61.39 Aligned_cols=176 Identities=15% Similarity=0.160 Sum_probs=123.1
Q ss_pred ChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCc--cHHHHHHHHcC---C--Ccee----------ecCccchhHHHHH
Q 012398 252 TGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANH--NAFELLSKYSS---S--HLVF----------NDDIQGTASVVLA 314 (464)
Q Consensus 252 ~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~--~af~iL~ryr~---~--~~~F----------nDDiQGTaaV~LA 314 (464)
+-.|-..|...|++++.+.-||..-|-=+|++.. .---+.+.|+. . -.++ ++.-.-||-=+.-
T Consensus 141 s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~~ 220 (440)
T 3aog_A 141 SPGELERLTRRYTSEIGILLGPDRDIPAPDVNTGEREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVFI 220 (440)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHHH
Confidence 4456677889999999999999888888999874 22235566631 1 1222 2223346666667
Q ss_pred HHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEcccCcccCCCccCCchhc-hhhh
Q 012398 315 GILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIW-LVDSKGLIVSSRKESLQHFK-KPWA 392 (464)
Q Consensus 315 gll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~-lvD~~GLl~~~r~~~l~~~k-~~fa 392 (464)
++-.+++..|.+|++.||+|.|.|..|...|++|.+ .|. +++ +.|++|-|++.. .++... ..+.
T Consensus 221 ~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e-----~Ga-------kvVavsD~~G~i~dp~--Gld~~~l~~~~ 286 (440)
T 3aog_A 221 TAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHD-----HGA-------RVVAVQDHTGTVYNEA--GIDPYDLLRHV 286 (440)
T ss_dssp HHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEECSSCEEECTT--CCCHHHHHHHH
T ss_pred HHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHH-----CCC-------EEEEEEcCCcEEECCC--CCCHHHHHHHH
Confidence 778888899999999999999999999999998865 352 455 999999998864 233322 1122
Q ss_pred hhcCC--------CCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 012398 393 HEHAP--------IKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 447 (464)
Q Consensus 393 ~~~~~--------~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN-Pt 447 (464)
..... .-+-.+ +-.++.||||=++. ++.+|.+-++.+ .-.+|.--+| |+
T Consensus 287 ~~~g~i~~y~~a~~i~~~e-i~~~~~DIlvPcA~-~n~i~~~na~~l----~ak~VvEgAN~p~ 344 (440)
T 3aog_A 287 QEFGGVRGYPKAEPLPAAD-FWGLPVEFLVPAAL-EKQITEQNAWRI----RARIVAEGANGPT 344 (440)
T ss_dssp HHTSSSTTCTTSEECCHHH-HTTCCCSEEEECSS-SSCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HhcCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccchhhHHHc----CCcEEEecCcccc
Confidence 11111 113344 44579999998877 458999988888 5788888888 65
No 21
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.69 E-value=0.0033 Score=62.93 Aligned_cols=96 Identities=16% Similarity=0.210 Sum_probs=79.8
Q ss_pred chhHHHHHHHHHHHHHhCCCCCcceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCc
Q 012398 307 GTASVVLAGILSALKLVGGTLADQTFLFLGAG-EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ 385 (464)
Q Consensus 307 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAG-sAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~ 385 (464)
+-.-+|-.|++-.++-.+.+++..++||+|+| ..|.-+|.++... | ..+.+++++
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK------------ 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT------------
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC------------
Confidence 44567888999999999999999999999999 5899999988652 4 358888743
Q ss_pred hhchhhhhhcCCCCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 012398 386 HFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNP 446 (464)
Q Consensus 386 ~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSNP 446 (464)
..+|.+.++. +|++|+..+.++.+|+|||+ +.-+|+=++-|
T Consensus 199 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ------------TAHLDEEVNK--GDILVVATGQPEMVKGEWIK------PGAIVIDCGIN 239 (301)
T ss_dssp ------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCCB
T ss_pred ------------cccHHHHhcc--CCEEEECCCCcccCCHHHcC------CCcEEEEccCC
Confidence 1468999997 99999999999999999985 56688877754
No 22
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.54 E-value=0.0054 Score=60.96 Aligned_cols=95 Identities=20% Similarity=0.271 Sum_probs=76.7
Q ss_pred hhHHHHHHHHHHHHHhCCCCCcceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCch
Q 012398 308 TASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH 386 (464)
Q Consensus 308 TaaV~LAgll~Alk~~g~~l~d~riv~~GAGs-Ag~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~ 386 (464)
-.-+|-.|++..++-.+.+|++.++|++|+|. .|..+|.+|.. .|. .+.+++|+
T Consensus 140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~-----~gA-------tVtv~hs~------------- 194 (285)
T 3l07_A 140 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLN-----AKA-------TVTTCHRF------------- 194 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHH-----CCC-------eEEEEeCC-------------
Confidence 34578888999999999999999999999876 89999999875 242 47777653
Q ss_pred hchhhhhhcCCCCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC-CC
Q 012398 387 FKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS-NP 446 (464)
Q Consensus 387 ~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLS-NP 446 (464)
..+|.+.++. +|++|...+.++.+++|||+ +.-+|+=++ ||
T Consensus 195 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvgi~~ 236 (285)
T 3l07_A 195 -----------TTDLKSHTTK--ADILIVAVGKPNFITADMVK------EGAVVIDVGINH 236 (285)
T ss_dssp -----------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCCEE
T ss_pred -----------chhHHHhccc--CCEEEECCCCCCCCCHHHcC------CCcEEEEecccC
Confidence 1368899987 99999999999999999984 566777665 44
No 23
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.54 E-value=0.027 Score=58.66 Aligned_cols=176 Identities=13% Similarity=0.185 Sum_probs=116.2
Q ss_pred ChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCcc--HHHHHHHHcC---CC---ceee----------cCccchhHHHH
Q 012398 252 TGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHN--AFELLSKYSS---SH---LVFN----------DDIQGTASVVL 313 (464)
Q Consensus 252 ~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~--af~iL~ryr~---~~---~~Fn----------DDiQGTaaV~L 313 (464)
+-.|-..|...|++++.+.-||..-|-=+|++..- ---+.+.|+. .. .++- +.-.-||-=+.
T Consensus 117 s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 196 (421)
T 2yfq_A 117 SERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGVA 196 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHHH
Confidence 44566778899999999999999999999999752 2245666642 11 2221 22233666666
Q ss_pred HHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEccc-----CcccCCCccCCchh
Q 012398 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIW-LVDSK-----GLIVSSRKESLQHF 387 (464)
Q Consensus 314 Agll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~-lvD~~-----GLl~~~r~~~l~~~ 387 (464)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .|. +++ +.|++ |-|++.. .++..
T Consensus 197 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~-----~Ga-------kvVavsD~~~~~~~G~i~d~~--Gld~~ 262 (421)
T 2yfq_A 197 VVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIER-----QGG-------KVCAIAEWDRNEGNYALYNEN--GIDFK 262 (421)
T ss_dssp HHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHH-----TTC-------CEEECCBCCSSSCSBCCBCSS--CCCHH
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEEecCCCccceEEECCC--CCCHH
Confidence 6778888889999999999999999999999998865 352 455 89999 9998864 34332
Q ss_pred c-hhhhhhcCCC------C--CHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 012398 388 K-KPWAHEHAPI------K--SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 447 (464)
Q Consensus 388 k-~~fa~~~~~~------~--~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN-Pt 447 (464)
. ..+......+ . +-.+ +-.++.||||=++. ++.+|++-.+.+ ...+|.--+| |+
T Consensus 263 ~l~~~~~~~g~i~~~~~a~~i~~~~-~~~~~~DIliP~A~-~n~i~~~~A~~l----~ak~VvEgAN~P~ 326 (421)
T 2yfq_A 263 ELLAYKEANKTLIGFPGAERITDEE-FWTKEYDIIVPAAL-ENVITGERAKTI----NAKLVCEAANGPT 326 (421)
T ss_dssp HHHHHHHHHCC----------------------CEEECSC-SSCSCHHHHTTC----CCSEEECCSSSCS
T ss_pred HHHHHHHhcCCcccCCCceEeCccc-hhcCCccEEEEcCC-cCcCCcccHHHc----CCeEEEeCCcccc
Confidence 2 1121111111 0 1122 34468999998776 569999999888 5678888888 65
No 24
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.35 E-value=0.0083 Score=59.60 Aligned_cols=96 Identities=17% Similarity=0.251 Sum_probs=77.9
Q ss_pred hhHHHHHHHHHHHHHhCCCCCcceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCch
Q 012398 308 TASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH 386 (464)
Q Consensus 308 TaaV~LAgll~Alk~~g~~l~d~riv~~GAGs-Ag~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~ 386 (464)
-.-+|-.|++..++-.+.+|+..++|++|+|. .|..+|.+|... |. .+.+++++
T Consensus 139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-----gA-------tVtv~h~~------------- 193 (285)
T 3p2o_A 139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-----GA-------TVSVCHIK------------- 193 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 45678889999999999999999999999876 899999998752 42 47777752
Q ss_pred hchhhhhhcCCCCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC-CCC
Q 012398 387 FKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS-NPT 447 (464)
Q Consensus 387 ~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLS-NPt 447 (464)
..+|.+.++. +|++|...+.++.++.|||+ +.-+|+=++ ||.
T Consensus 194 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~~~ 236 (285)
T 3p2o_A 194 -----------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK------EGVIVVDVGINRL 236 (285)
T ss_dssp -----------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC------TTEEEEECCCEEC
T ss_pred -----------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC------CCeEEEEeccCcc
Confidence 1368899987 99999999999999999984 566777664 554
No 25
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.28 E-value=0.0069 Score=60.29 Aligned_cols=96 Identities=14% Similarity=0.147 Sum_probs=79.0
Q ss_pred chhHHHHHHHHHHHHHhCCCCCcceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCc
Q 012398 307 GTASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ 385 (464)
Q Consensus 307 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAGs-Ag~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~ 385 (464)
+-.-+|-.|++-.++-.+.+++..++||+|+|. .|.-+|.++.. .| ..+.+++++
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~-----~g-------AtVtv~hs~------------ 192 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLL-----AG-------CTTTVTHRF------------ 192 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHT-----TT-------CEEEEECSS------------
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHH-----CC-------CeEEEEeCC------------
Confidence 455678889999999999999999999999995 69999988864 23 357778642
Q ss_pred hhchhhhhhcCCCCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 012398 386 HFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNP 446 (464)
Q Consensus 386 ~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSNP 446 (464)
..+|.+.++. +|++|+..+.++.+++|+|+ +.-+|+=++-|
T Consensus 193 ------------t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk------~GavVIDVgi~ 233 (288)
T 1b0a_A 193 ------------TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK------EGAIVIDVGIN 233 (288)
T ss_dssp ------------CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC------TTCEEEECCCE
T ss_pred ------------chhHHHHhcc--CCEEEECCCCcCcCCHHHcC------CCcEEEEccCC
Confidence 1468999998 99999999999999999984 56688877755
No 26
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.27 E-value=0.0086 Score=59.30 Aligned_cols=92 Identities=11% Similarity=0.202 Sum_probs=75.4
Q ss_pred chhHHHHHHHHHHHHHhCCCCCcceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCc
Q 012398 307 GTASVVLAGILSALKLVGGTLADQTFLFLGAG-EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ 385 (464)
Q Consensus 307 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAG-sAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~ 385 (464)
+-.-+|-.|++..++-.+ |+..++|++|+| ..|..+|.++... |. .+.+++++
T Consensus 130 ~~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~-----gA-------tVtv~~~~------------ 183 (276)
T 3ngx_A 130 FLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNR-----NY-------TVSVCHSK------------ 183 (276)
T ss_dssp SSCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT------------
T ss_pred CCCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHC-----CC-------eEEEEeCC------------
Confidence 345678889999999999 999999999998 5899999998752 42 57777652
Q ss_pred hhchhhhhhcCCCCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 012398 386 HFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 386 ~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLS 444 (464)
..+|.+.++. +|++|...+.++.+++++++ +.-+|+=++
T Consensus 184 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 222 (276)
T 3ngx_A 184 ------------TKDIGSMTRS--SKIVVVAVGRPGFLNREMVT------PGSVVIDVG 222 (276)
T ss_dssp ------------CSCHHHHHHH--SSEEEECSSCTTCBCGGGCC------TTCEEEECC
T ss_pred ------------cccHHHhhcc--CCEEEECCCCCccccHhhcc------CCcEEEEec
Confidence 1468899998 99999999999999999984 566888775
No 27
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=96.26 E-value=0.0084 Score=60.37 Aligned_cols=113 Identities=19% Similarity=0.254 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHH---------hCCCCCcceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCC
Q 012398 311 VVLAGILSALKL---------VGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSR 380 (464)
Q Consensus 311 V~LAgll~Alk~---------~g~~l~d~riv~~GAGs-Ag~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r 380 (464)
+|-.|.+-.++- .|.+++..++||+|+|. .|.-+|+++... | .+++++|++..-...|
T Consensus 150 cTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~-----g-------AtVtv~nR~~~~l~~r 217 (320)
T 1edz_A 150 CTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLAND-----G-------ATVYSVDVNNIQKFTR 217 (320)
T ss_dssp HHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTT-----S-------CEEEEECSSEEEEEES
T ss_pred CcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHC-----C-------CEEEEEeCchHHHHhH
Confidence 444555666666 68899999999999995 599999888642 4 3589999976655555
Q ss_pred ccCCchhchhhhhhcCC---C--CCHHHHHhcCCCcEEEeccCCCCC-CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 381 KESLQHFKKPWAHEHAP---I--KSLLDAVKAIKPTMLMGTSGVGKT-FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 381 ~~~l~~~k~~fa~~~~~---~--~~L~e~v~~vkptvLIG~S~~~g~-ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
...+... ++.... . .+|.++++. +|++|+..+.++. +|.|+|+ +.-+|+-++.|-
T Consensus 218 a~~la~~----~~~~t~~~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk------~GavVIDVgi~r 278 (320)
T 1edz_A 218 GESLKLN----KHHVEDLGEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK------EGAVCINFACTK 278 (320)
T ss_dssp CCCSSCC----CCEEEEEEECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC------TTEEEEECSSSC
T ss_pred HHHHhhh----cccccccccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC------CCeEEEEcCCCc
Confidence 4434311 111100 1 469999998 9999999998887 9999984 456999999875
No 28
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.19 E-value=0.011 Score=58.82 Aligned_cols=96 Identities=18% Similarity=0.261 Sum_probs=77.3
Q ss_pred hhHHHHHHHHHHHHHhCCCCCcceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCch
Q 012398 308 TASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH 386 (464)
Q Consensus 308 TaaV~LAgll~Alk~~g~~l~d~riv~~GAGs-Ag~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~ 386 (464)
-.-+|-.|++..|+-.+.+|+..++|++|+|. .|..+|.+|... |. .+.+++++
T Consensus 140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~-----gA-------tVtv~hs~------------- 194 (286)
T 4a5o_A 140 LRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLG-----GC-------TVTVTHRF------------- 194 (286)
T ss_dssp SCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 34567889999999999999999999999875 899999998752 42 46777642
Q ss_pred hchhhhhhcCCCCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC-CCC
Q 012398 387 FKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS-NPT 447 (464)
Q Consensus 387 ~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLS-NPt 447 (464)
..+|.+.++. +|++|+..+.++.++.|||+ +.-+|+=++ ||.
T Consensus 195 -----------T~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvgi~~~ 237 (286)
T 4a5o_A 195 -----------TRDLADHVSR--ADLVVVAAGKPGLVKGEWIK------EGAIVIDVGINRQ 237 (286)
T ss_dssp -----------CSCHHHHHHT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCSCSS
T ss_pred -----------CcCHHHHhcc--CCEEEECCCCCCCCCHHHcC------CCeEEEEeccccc
Confidence 1368899997 99999999999999999984 556887664 665
No 29
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.08 E-value=0.015 Score=56.86 Aligned_cols=137 Identities=16% Similarity=0.227 Sum_probs=81.3
Q ss_pred HHHHHHHHHH-hcCCCeeeeeecCCCccHHHHHHHHcC------CC-ceeec-C--ccchhHHHHHHHHHHHHHhCCCCC
Q 012398 260 LQEFMTAVKQ-NYGEKVLIQFEDFANHNAFELLSKYSS------SH-LVFND-D--IQGTASVVLAGILSALKLVGGTLA 328 (464)
Q Consensus 260 idefv~av~~-~fGp~~lIq~EDf~~~~af~iL~ryr~------~~-~~FnD-D--iQGTaaV~LAgll~Alk~~g~~l~ 328 (464)
+.+|++.++. .|.+ ++.-==-...+++++++... -+ ++.++ | ..|.-.= -.|++.+++-.+.+++
T Consensus 51 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~lD~l~~~A~~iGAVNTv~~~~~g~l~G~NTD-~~G~~~~l~~~~~~l~ 126 (283)
T 3jyo_A 51 LKTLLDAALYLGFNG---LNITHPYKQAVLPLLDEVSEQATQLGAVNTVVIDATGHTTGHNTD-VSGFGRGMEEGLPNAK 126 (283)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTCTTTTGGGSSEECHHHHHHTCCCEEEECTTSCEEEECHH-HHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHhhCCCCE---EEECcccHHHHHHHhhhCCHHHHHhCcceEEEECCCCeEEEecCC-HHHHHHHHHHhCcCcC
Confidence 5777777764 4544 33322222334444444321 11 33444 4 2443322 4688899998888999
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhc-------CCCCCH
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH-------APIKSL 401 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~-------~~~~~L 401 (464)
+.+++|+|||.+|.+++..|.. .|. ++|+++|+. .++ .....+.+.... -+..+|
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~----~~~---a~~la~~~~~~~~~~~i~~~~~~~l 188 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD----TSR---AQALADVINNAVGREAVVGVDARGI 188 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS----HHH---HHHHHHHHHHHHTSCCEEEECSTTH
T ss_pred CCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC----HHH---HHHHHHHHHhhcCCceEEEcCHHHH
Confidence 9999999999888888877754 353 579988874 222 111112222111 112478
Q ss_pred HHHHhcCCCcEEEeccCCC
Q 012398 402 LDAVKAIKPTMLMGTSGVG 420 (464)
Q Consensus 402 ~e~v~~vkptvLIG~S~~~ 420 (464)
.++++. +|++|-++..+
T Consensus 189 ~~~l~~--~DiVInaTp~G 205 (283)
T 3jyo_A 189 EDVIAA--ADGVVNATPMG 205 (283)
T ss_dssp HHHHHH--SSEEEECSSTT
T ss_pred HHHHhc--CCEEEECCCCC
Confidence 888887 99999877643
No 30
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.07 E-value=0.014 Score=56.81 Aligned_cols=159 Identities=16% Similarity=0.228 Sum_probs=91.0
Q ss_pred HHHHHHHHH-HhcCCCeeeeeecCCCccHHHHHHHHcC--------CCceeecC-ccchhHHHHHHHHHH-HHHhCCCCC
Q 012398 260 LQEFMTAVK-QNYGEKVLIQFEDFANHNAFELLSKYSS--------SHLVFNDD-IQGTASVVLAGILSA-LKLVGGTLA 328 (464)
Q Consensus 260 idefv~av~-~~fGp~~lIq~EDf~~~~af~iL~ryr~--------~~~~FnDD-iQGTaaV~LAgll~A-lk~~g~~l~ 328 (464)
+.++++.++ ..|++ ++.--=-...+++++++... +..++.|+ ..|.-.= ..|++.+ |+-.|.+++
T Consensus 44 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l~ 119 (272)
T 3pwz_A 44 FEAQVLQFRSEGGKG---MNITAPFKLRAFELADRRSERAQLARAANALKFEDGRIVAENFD-GIGLLRDIEENLGEPLR 119 (272)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTCHHHHHHHCSEECHHHHHHTCCSEEEEETTEEEEECCH-HHHHHHHHHTTSCCCCT
T ss_pred HHHHHHHHhhCCCCE---EEECchhHHHHHHHHhhCCHHHHHhCccceEEccCCeEEEecCC-HHHHHHHHHHHcCCCcc
Confidence 567777775 35655 55544344456666665431 11134443 4563333 4588888 887888999
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI 408 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~v 408 (464)
+.+++|+|||.+|.+++..|.+ .|. ++|+++++. .++. ....+.+....-...++.+. ..-
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R~----~~~a---~~la~~~~~~~~~~~~~~~l-~~~ 180 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANRD----MAKA---LALRNELDHSRLRISRYEAL-EGQ 180 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECSC----HHHH---HHHHHHHCCTTEEEECSGGG-TTC
T ss_pred CCEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHH---HHHHHHhccCCeeEeeHHHh-ccc
Confidence 9999999999888888877764 353 578888874 2221 11111221100000122221 113
Q ss_pred CCcEEEeccCCC-----CCCCHHHHHHHHcCCCCcEEEEc-CCCC
Q 012398 409 KPTMLMGTSGVG-----KTFTKEVVEAMASFNEKPVIFAL-SNPT 447 (464)
Q Consensus 409 kptvLIG~S~~~-----g~ft~evv~~Ma~~~erPIIFaL-SNPt 447 (464)
++|++|-++..+ ..+..+.+ .+..+||=+ .||.
T Consensus 181 ~~DivInaTp~gm~~~~~~i~~~~l------~~~~~V~DlvY~P~ 219 (272)
T 3pwz_A 181 SFDIVVNATSASLTADLPPLPADVL------GEAALAYELAYGKG 219 (272)
T ss_dssp CCSEEEECSSGGGGTCCCCCCGGGG------TTCSEEEESSCSCC
T ss_pred CCCEEEECCCCCCCCCCCCCCHHHh------CcCCEEEEeecCCC
Confidence 699999776543 13454443 367788877 5764
No 31
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=96.05 E-value=0.063 Score=56.71 Aligned_cols=179 Identities=17% Similarity=0.184 Sum_probs=120.4
Q ss_pred ChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCcc--HHHHHHHHcC---C-Ccee----------ecCccchhHHHHHH
Q 012398 252 TGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHN--AFELLSKYSS---S-HLVF----------NDDIQGTASVVLAG 315 (464)
Q Consensus 252 ~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~--af~iL~ryr~---~-~~~F----------nDDiQGTaaV~LAg 315 (464)
+-.+...|-..||..+.+..||..=|-=+|++..- ---+.+.|+. . -.|+ .++-.-||-=+.-+
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~ 238 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYF 238 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHH
Confidence 34566677777999999888999888999998632 2234556642 1 0111 11223366666667
Q ss_pred HHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEcccCcccCCCccCCchhc------
Q 012398 316 ILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIW-LVDSKGLIVSSRKESLQHFK------ 388 (464)
Q Consensus 316 ll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~-lvD~~GLl~~~r~~~l~~~k------ 388 (464)
+-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +++ +.|++|-|++.. .++...
T Consensus 239 ~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~--Gid~edl~~l~~ 304 (470)
T 2bma_A 239 VLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN--GFTHENLEFLID 304 (470)
T ss_dssp HHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS--CCCHHHHHHHHH
T ss_pred HHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC--CCCHHHHHHHHH
Confidence 788888899999999999999999999999998653 52 455 899999888753 343321
Q ss_pred ---------hhhhhhcCCCC--CHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 012398 389 ---------KPWAHEHAPIK--SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 447 (464)
Q Consensus 389 ---------~~fa~~~~~~~--~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN-Pt 447 (464)
..|+...+... +-.+.. .++.||||=+.. ++.+|++-++.+-+ |.-.+|.--+| |+
T Consensus 305 ~k~~~~g~v~~~~~~~~~a~~v~~~~~~-~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~ 372 (470)
T 2bma_A 305 LKEEKKGRIKEYLNHSSTAKYFPNEKPW-GVPCTLAFPCAT-QNDVDLDQAKLLQK-NGCILVGEGANMPS 372 (470)
T ss_dssp HHTTTTCCGGGGGGTCSSCEECSSCCTT-SSCCSEEEECSS-TTCBCSHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHHhcCCcHHHHHhhcCCcEEecCcCee-ecCccEEEeccc-cCcCCHHHHHHHHh-cCcEEEEeCCCCCC
Confidence 12221000000 001222 568999998886 56999999999954 45679999999 65
No 32
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.04 E-value=0.012 Score=58.81 Aligned_cols=96 Identities=19% Similarity=0.276 Sum_probs=76.9
Q ss_pred ccchhHHHHHHHHHHHHHhCCCCCcceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccC
Q 012398 305 IQGTASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKES 383 (464)
Q Consensus 305 iQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGs-Ag~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~ 383 (464)
..|-.-+|-.|++..|+-.+.+|+..++||+|+|. .|..+|.+|... |. .+.+++++ .
T Consensus 141 ~~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~~~~-------T-- 199 (300)
T 4a26_A 141 EPPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE-----NA-------TVTIVHSG-------T-- 199 (300)
T ss_dssp CCSCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------S--
T ss_pred cCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------C--
Confidence 34445678889999999999999999999999876 899999998752 42 57888762 1
Q ss_pred CchhchhhhhhcCCCCCHH--HHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 012398 384 LQHFKKPWAHEHAPIKSLL--DAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 384 l~~~k~~fa~~~~~~~~L~--e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLS 444 (464)
.+|. +.++. +|++|...+.++.++.++|+ +.-+|+=++
T Consensus 200 ---------------~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 239 (300)
T 4a26_A 200 ---------------STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK------EGAAVVDVG 239 (300)
T ss_dssp ---------------CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC------TTCEEEECC
T ss_pred ---------------CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC------CCcEEEEEe
Confidence 1355 88987 99999999999999999984 566777664
No 33
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=95.84 E-value=0.32 Score=51.22 Aligned_cols=189 Identities=17% Similarity=0.159 Sum_probs=126.5
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCcc--HHHHHHHHc---CCCc-ee----------ecCccchhHHHHH
Q 012398 251 ATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHN--AFELLSKYS---SSHL-VF----------NDDIQGTASVVLA 314 (464)
Q Consensus 251 ~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~--af~iL~ryr---~~~~-~F----------nDDiQGTaaV~LA 314 (464)
.+-.+...|...||..+.+..||..=|-=+|++..- ---+.+.|+ ...+ |+ ..--.-||-=+.-
T Consensus 145 ~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~ 224 (456)
T 3r3j_A 145 KSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVY 224 (456)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHH
Confidence 345667777778999998888999888999998642 222455664 2221 11 1112246666777
Q ss_pred HHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchh----
Q 012398 315 GILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKP---- 390 (464)
Q Consensus 315 gll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~---- 390 (464)
++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+.+.|++|-|++.. .++..+..
T Consensus 225 ~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~--Gld~~~l~~~~~ 291 (456)
T 3r3j_A 225 FAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN--GFTKEQLNYIMD 291 (456)
T ss_dssp HHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHHH
Confidence 7888888889999999999999999999999998764 52 2345899999998753 35433221
Q ss_pred -----------hhhhcCCC--CCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHH
Q 012398 391 -----------WAHEHAPI--KSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PTSQSECTAEE 456 (464)
Q Consensus 391 -----------fa~~~~~~--~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN-Pt~~~E~tped 456 (464)
|+...+.. -+-.+ +-.++.||||=+.. ++.+|++-++.+-+ +.-+||.--+| |+ -+| +++
T Consensus 292 ~k~~~~~~v~~~~~~~~~a~~v~~~~-i~~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~-T~e--A~~ 365 (456)
T 3r3j_A 292 IKNNQRLRLKEYLKYSKTAKYFENQK-PWNIPCDIAFPCAT-QNEINENDADLFIQ-NKCKMIVEGANMPT-HIK--ALH 365 (456)
T ss_dssp HHHTSCCCGGGGGGTCSSCEEECSCC-GGGSCCSEEEECSC-TTCBCHHHHHHHHH-HTCCEEECCSSSCB-CTT--HHH
T ss_pred HHHhcCcchhhhhhcCCCceEeCCcc-ccccCccEEEeCCC-ccchhhHHHHHHHh-cCCeEEEecCCCCC-CHH--HHH
Confidence 11100110 01112 33468999998887 56999999999843 24689999999 65 344 444
Q ss_pred Hh
Q 012398 457 AY 458 (464)
Q Consensus 457 A~ 458 (464)
.+
T Consensus 366 iL 367 (456)
T 3r3j_A 366 KL 367 (456)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 34
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=95.81 E-value=0.047 Score=57.66 Aligned_cols=124 Identities=15% Similarity=0.253 Sum_probs=88.2
Q ss_pred cCccchhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCcc
Q 012398 303 DDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKE 382 (464)
Q Consensus 303 DDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~ 382 (464)
+.+.|.......|+ .+.++..+.+.+|+|+|.|..|.++|+.+... |+ +++.+|++.. +.
T Consensus 234 r~~~~~~~~l~~gw---~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~----~~- 293 (479)
T 1v8b_A 234 DNVYGCRHSLPDGL---MRATDFLISGKIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI----CA- 293 (479)
T ss_dssp HHHHHHHHHHHHHH---HHHHCCCCTTSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH----HH-
T ss_pred hchHhHHHHHhhhh---hhccccccCCCEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh----hH-
Confidence 34455555556662 35678899999999999999999999998653 53 6888887521 00
Q ss_pred CCchhchhhhhhcCCCCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 012398 383 SLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYT 459 (464)
Q Consensus 383 ~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpedA~~ 459 (464)
+. .+...-...+|.|+++. .|++|......+.++++.++.|. +..||.=.|... .|+.-++..+
T Consensus 294 -~~-----a~~~g~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gailiNvgrg~--~EId~~aL~~ 357 (479)
T 1v8b_A 294 -IQ-----AVMEGFNVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMK---NNAVVGNIGHFD--DEIQVNELFN 357 (479)
T ss_dssp -HH-----HHTTTCEECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCC---TTCEEEECSSTT--TSBCHHHHHT
T ss_pred -HH-----HHHcCCEecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcC---CCcEEEEeCCCC--ccccchhhhc
Confidence 00 01111112579999987 99999997777899999999995 577888888755 6677766655
No 35
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=95.59 E-value=0.082 Score=55.06 Aligned_cols=177 Identities=18% Similarity=0.195 Sum_probs=117.7
Q ss_pred ChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCccHHH---HHHHHcC---C--CceeecC----------ccchhHHHH
Q 012398 252 TGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFE---LLSKYSS---S--HLVFNDD----------IQGTASVVL 313 (464)
Q Consensus 252 ~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af~---iL~ryr~---~--~~~FnDD----------iQGTaaV~L 313 (464)
+-+|-..|...|++++.+.-||..-|-=+|++.. ..+ +.+.|+. . ..++--+ -.-||-=+.
T Consensus 116 s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 194 (421)
T 1v9l_A 116 SQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVA 194 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHHH
Confidence 4456678889999999999999999999999873 222 3455531 1 1222221 122555556
Q ss_pred HHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEcccCcccCCCccC---Cchhch
Q 012398 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIW-LVDSKGLIVSSRKES---LQHFKK 389 (464)
Q Consensus 314 Agll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~-lvD~~GLl~~~r~~~---l~~~k~ 389 (464)
-++-.+++-.|.+|++.+|+|.|.|..|...|++|.+ .|. +++ +.|++|.|++...=+ +..++.
T Consensus 195 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e-----~Ga-------kVVavsD~~G~i~dp~GlD~~~l~~~k~ 262 (421)
T 1v9l_A 195 VATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEK-----MGA-------KVIAVSDINGVAYRKEGLNVELIQKNKG 262 (421)
T ss_dssp HHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSSCEEECTTCCCTHHHHHTTT
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEECCCcEEECCCCCCHHHHHHHHH
Confidence 6777788889999999999999999999999988864 352 455 999999998764211 111221
Q ss_pred h--------hhhhc--CCCCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 012398 390 P--------WAHEH--APIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 447 (464)
Q Consensus 390 ~--------fa~~~--~~~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN-Pt 447 (464)
. |.... ..+.+-.| +-.++.|+|+=+.. ++.+|++-++.+ .-.||.--+| |+
T Consensus 263 ~~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A~-~~~I~~~~a~~l----~ak~V~EgAN~p~ 325 (421)
T 1v9l_A 263 LTGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAAI-ENVIRGDNAGLV----KARLVVEGANGPT 325 (421)
T ss_dssp SCHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECSC-SSCBCTTTTTTC----CCSEEECCSSSCB
T ss_pred hhCCccccccccccCceEeCCchh-hhcCCccEEEecCc-CCccchhhHHHc----CceEEEecCCCcC
Confidence 1 11000 11102233 34468999997775 568998888777 5688988888 65
No 36
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.58 E-value=0.0061 Score=52.40 Aligned_cols=109 Identities=15% Similarity=0.208 Sum_probs=66.0
Q ss_pred chhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCch
Q 012398 307 GTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH 386 (464)
Q Consensus 307 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~ 386 (464)
|-.+|+.+++-.+-+.. ..+|+|+|+|..|..+++.+.. .| .+ ++++|++ .++ ...
T Consensus 4 ~~~sv~~~a~~~~~~~~-----~~~v~iiG~G~iG~~~a~~l~~-----~g------~~-v~v~~r~----~~~---~~~ 59 (144)
T 3oj0_A 4 GKVSIPSIVYDIVRKNG-----GNKILLVGNGMLASEIAPYFSY-----PQ------YK-VTVAGRN----IDH---VRA 59 (144)
T ss_dssp CCCSHHHHHHHHHHHHC-----CCEEEEECCSHHHHHHGGGCCT-----TT------CE-EEEEESC----HHH---HHH
T ss_pred CcccHHHHHHHHHHhcc-----CCEEEEECCCHHHHHHHHHHHh-----CC------CE-EEEEcCC----HHH---HHH
Confidence 33445555444333322 7799999999999988876643 24 23 8888863 111 111
Q ss_pred hchhhhhhcCCCCCHHHHHhcCCCcEEEeccCCC-CCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 387 FKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVG-KTFTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 387 ~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~-g~ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
..+.|.-......++.++++. +|++|-+++.+ ..++.++++ +.-+|+-+++|.
T Consensus 60 ~a~~~~~~~~~~~~~~~~~~~--~Divi~at~~~~~~~~~~~l~------~g~~vid~~~p~ 113 (144)
T 3oj0_A 60 FAEKYEYEYVLINDIDSLIKN--NDVIITATSSKTPIVEERSLM------PGKLFIDLGNPP 113 (144)
T ss_dssp HHHHHTCEEEECSCHHHHHHT--CSEEEECSCCSSCSBCGGGCC------TTCEEEECCSSC
T ss_pred HHHHhCCceEeecCHHHHhcC--CCEEEEeCCCCCcEeeHHHcC------CCCEEEEccCCc
Confidence 111221111134689999987 99999776544 245555442 477999999985
No 37
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.58 E-value=0.023 Score=56.38 Aligned_cols=98 Identities=14% Similarity=0.274 Sum_probs=76.8
Q ss_pred chhHHHHHHHHHHHHHhCCCCCcceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCc
Q 012398 307 GTASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ 385 (464)
Q Consensus 307 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAGs-Ag~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~ 385 (464)
+-.-+|-.|++-.++-.+.+++..++|++|+|. .|.-+|.+|.. .|. ...+.+++++
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~-----~g~-----~atVtv~h~~------------ 193 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTR-----RSE-----NATVTLCHTG------------ 193 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTS-----TTT-----CCEEEEECTT------------
T ss_pred CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhc-----CCC-----CCEEEEEECc------------
Confidence 445677888999999999999999999999996 58888888753 210 1357777532
Q ss_pred hhchhhhhhcCCCCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 012398 386 HFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNP 446 (464)
Q Consensus 386 ~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSNP 446 (464)
..+|.+.++. +|++|+..+.++.+|+|+|+ +.-+|+=++-|
T Consensus 194 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 234 (281)
T 2c2x_A 194 ------------TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR------PGAAVIDVGVS 234 (281)
T ss_dssp ------------CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC------TTCEEEECCEE
T ss_pred ------------hhHHHHHHhh--CCEEEECCCCCcccCHHHcC------CCcEEEEccCC
Confidence 1469999987 99999999999999999985 45688877755
No 38
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=95.52 E-value=0.095 Score=53.28 Aligned_cols=102 Identities=18% Similarity=0.316 Sum_probs=66.5
Q ss_pred CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHH
Q 012398 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAV 405 (464)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v 405 (464)
++.+.+|+|+|+|..|..+++.+... |. ++|+++|+. ..| .....+.|--..-...++.+++
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~-----G~------~~V~v~~r~----~~r---a~~la~~~g~~~~~~~~l~~~l 225 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDR-----GV------RAVLVANRT----YER---AVELARDLGGEAVRFDELVDHL 225 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHH-----CC------SEEEEECSS----HHH---HHHHHHHHTCEECCGGGHHHHH
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHC-----CC------CEEEEEeCC----HHH---HHHHHHHcCCceecHHhHHHHh
Confidence 57889999999999999999988653 53 578888873 111 1111111110111124688888
Q ss_pred hcCCCcEEEeccCCCC-CCCHHHHHH--HH-cCCCCcEEEEcCCCC
Q 012398 406 KAIKPTMLMGTSGVGK-TFTKEVVEA--MA-SFNEKPVIFALSNPT 447 (464)
Q Consensus 406 ~~vkptvLIG~S~~~g-~ft~evv~~--Ma-~~~erPIIFaLSNPt 447 (464)
+. +|++|-+++.+. .++++.++. |. +...+-+++-++.|-
T Consensus 226 ~~--aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 226 AR--SDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR 269 (404)
T ss_dssp HT--CSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred cC--CCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCC
Confidence 75 999998765443 568889988 43 223455778899886
No 39
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=95.46 E-value=0.023 Score=59.67 Aligned_cols=108 Identities=19% Similarity=0.342 Sum_probs=63.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhh-cCC-----CCCHHH
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-HAP-----IKSLLD 403 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~-~~~-----~~~L~e 403 (464)
.||+|+||||.|.. ..|+..+....-++.. ...|+|+|.+ .+|.+.....-+..+.. ..+ ..++.|
T Consensus 1 mKI~iIGaGs~~~t--~~l~~~~~~~~~l~~~--~~ei~L~Di~----~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~e 72 (477)
T 3u95_A 1 MKISIVGAGSVRFA--LQLVEDIAQTDELSRE--DTHIYLMDVH----ERRLNASYILARKYVEELNSPVKVVKTESLDE 72 (477)
T ss_dssp CEEEEETTTSHHHH--HHHHHHHHTCTTTCST--TCEEEEECSC----HHHHHHHHHHHHHHHHHHTCCCEEEEESCHHH
T ss_pred CEEEEECCCchhhH--HHHHHHHHhhHhcCCC--CCEEEEECCC----HHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHH
Confidence 38999999997643 2222222221122111 2479999974 23311000011111111 112 258999
Q ss_pred HHhcCCCcEEEeccCC-------------------------------------CC---CCC--------HHHHHHHHcCC
Q 012398 404 AVKAIKPTMLMGTSGV-------------------------------------GK---TFT--------KEVVEAMASFN 435 (464)
Q Consensus 404 ~v~~vkptvLIG~S~~-------------------------------------~g---~ft--------~evv~~Ma~~~ 435 (464)
|+++ +|++|=..++ +| +|- .|+++.|.++|
T Consensus 73 Al~g--AD~Vi~~~g~~~~Rvg~~~~r~~de~~~ip~k~G~~~~~l~qet~g~gG~~~~lR~~~~i~v~~~i~~~i~~~~ 150 (477)
T 3u95_A 73 AIEG--ADFIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQELNMVSTYTYVLSSYPDVKLALEIAEKMKKMA 150 (477)
T ss_dssp HHTT--CSEEEECCCCCCTTTCSSHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTSCSTTTTHHHHHHHHHHHHHHHHHC
T ss_pred HhCC--CCEEEECcccccccccccccccceeeeccCcccceeecccccccCCccchhHHHhhhhhHHHHHHHHHHHHhhC
Confidence 9998 9998843311 11 222 68999999999
Q ss_pred CCcEEEEcCCCC
Q 012398 436 EKPVIFALSNPT 447 (464)
Q Consensus 436 erPIIFaLSNPt 447 (464)
++.+++-.|||.
T Consensus 151 P~A~~in~tNP~ 162 (477)
T 3u95_A 151 PKAYLMQTANPV 162 (477)
T ss_dssp TTCEEEECSSCH
T ss_pred CCeEEEEecChH
Confidence 999999999997
No 40
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=95.29 E-value=0.41 Score=49.71 Aligned_cols=177 Identities=17% Similarity=0.184 Sum_probs=120.6
Q ss_pred ChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCcc--HHHHHHHHc---CC--CceeecC----------ccchhHHHHH
Q 012398 252 TGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHN--AFELLSKYS---SS--HLVFNDD----------IQGTASVVLA 314 (464)
Q Consensus 252 ~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~--af~iL~ryr---~~--~~~FnDD----------iQGTaaV~LA 314 (464)
+-+|-..|...|++++.+.-||..-|-=+|++..- ---+.+.|+ .. ..++--+ -.-||-=+.-
T Consensus 115 s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~ 194 (415)
T 2tmg_A 115 SRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKV 194 (415)
T ss_dssp CHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHH
Confidence 44566778899999999988998888889998642 222445553 11 1233221 1236555666
Q ss_pred HHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEcccCcccCCCccCCchhc-hhhh
Q 012398 315 GILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIW-LVDSKGLIVSSRKESLQHFK-KPWA 392 (464)
Q Consensus 315 gll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~-lvD~~GLl~~~r~~~l~~~k-~~fa 392 (464)
++-.+++-.|.+++..||+|.|.|..|...|++|.+ +.|. +++ +.|++|.+++.. .++... ..+.
T Consensus 195 ~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e----~~Ga-------kvVavsD~~G~i~dp~--Gld~~~l~~~~ 261 (415)
T 2tmg_A 195 CAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQ----ELGS-------KVVAVSDSRGGIYNPE--GFDVEELIRYK 261 (415)
T ss_dssp HHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHH----TTCC-------EEEEEECSSCEEECTT--CCCHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHH----hcCC-------EEEEEEeCCCeEECCC--CCCHHHHHHHH
Confidence 777888889999999999999999999999998865 0242 455 899999998764 343322 2222
Q ss_pred hhcCCC--------CCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 012398 393 HEHAPI--------KSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 447 (464)
Q Consensus 393 ~~~~~~--------~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN-Pt 447 (464)
.....+ -+-.| +-.++.|+||=+.. ++.+|++-.+.+ .-.+|.--+| |+
T Consensus 262 ~~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l----~ak~V~EgAN~p~ 319 (415)
T 2tmg_A 262 KEHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI----KAKAVVEGANGPT 319 (415)
T ss_dssp HHSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC----CCSEEECCSSSCB
T ss_pred HhhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc----CCeEEEeCCCccc
Confidence 211111 13344 45679999998776 458999988887 5678888888 65
No 41
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.21 E-value=0.016 Score=56.77 Aligned_cols=111 Identities=18% Similarity=0.250 Sum_probs=67.2
Q ss_pred HHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhh
Q 012398 313 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA 392 (464)
Q Consensus 313 LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa 392 (464)
-.|++.+++-.+.++++.+++|+|||.+|.+++..|.. .|. ++|+++++. .++.+.+.. .+.
T Consensus 101 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~----~~~a~~la~---~~~ 162 (277)
T 3don_A 101 GIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYK-----IVR------PTLTVANRT----MSRFNNWSL---NIN 162 (277)
T ss_dssp HHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC----GGGGTTCCS---CCE
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHHHHHHHH---hcc
Confidence 45677888888999999999999999998888887764 353 478888875 222222221 110
Q ss_pred hhcCCCCCHHHHHhcCCCcEEEeccCCCCCCCH--HHHHHHHcCCCCcEEEEcC-CCC
Q 012398 393 HEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTK--EVVEAMASFNEKPVIFALS-NPT 447 (464)
Q Consensus 393 ~~~~~~~~L~e~v~~vkptvLIG~S~~~g~ft~--evv~~Ma~~~erPIIFaLS-NPt 447 (464)
. ....++.++++. +|++|-++..+ .... +.+ ......+..+|+=|+ ||.
T Consensus 163 ~--~~~~~~~~~~~~--aDiVInaTp~G-m~~~~~~~l-~~~~l~~~~~V~D~vY~P~ 214 (277)
T 3don_A 163 K--INLSHAESHLDE--FDIIINTTPAG-MNGNTDSVI-SLNRLASHTLVSDIVYNPY 214 (277)
T ss_dssp E--ECHHHHHHTGGG--CSEEEECCC--------CCSS-CCTTCCSSCEEEESCCSSS
T ss_pred c--ccHhhHHHHhcC--CCEEEECccCC-CCCCCcCCC-CHHHcCCCCEEEEecCCCC
Confidence 0 012346666665 99999776543 2111 011 112224677888885 775
No 42
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=95.14 E-value=0.04 Score=54.41 Aligned_cols=101 Identities=23% Similarity=0.279 Sum_probs=66.3
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCC---CCCHHHHHh
Q 012398 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAP---IKSLLDAVK 406 (464)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~---~~~L~e~v~ 406 (464)
||+|+|| |..|..++..|+. .|+ ...++++|.+- ..+...+|.+...+ . +-.. ..++.++++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~--~~~~a~dL~~~~~~-~-~l~~~~~t~d~~~a~~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAH--TPGVAADLSHIETR-A-TVKGYLGPEQLPDCLK 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSS--HHHHHHHHTTSSSS-C-EEEEEESGGGHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCc--cHHHHHHHhccCcC-c-eEEEecCCCCHHHHhC
Confidence 8999998 9999999887653 354 35799999865 11100012111100 0 0000 136899999
Q ss_pred cCCCcEEEeccCCC---C-----------CCCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 407 AIKPTMLMGTSGVG---K-----------TFTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 407 ~vkptvLIG~S~~~---g-----------~ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+ +|++|=+.+.+ | ...+++++.|.+++...+|+-.|||.
T Consensus 68 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv 120 (314)
T 1mld_A 68 G--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPV 120 (314)
T ss_dssp T--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred C--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCc
Confidence 8 99988554433 2 24677888888899998988899998
No 43
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=95.12 E-value=0.017 Score=55.76 Aligned_cols=118 Identities=19% Similarity=0.227 Sum_probs=74.6
Q ss_pred hHHhhhCCCCCCceeeEEeecCCCccccccCccccccccCCCChhhHHHHHHHHHHHHHH-hcCCCeeeeeecCCCccHH
Q 012398 210 SLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQ-NYGEKVLIQFEDFANHNAF 288 (464)
Q Consensus 210 ~Ly~a~gGI~P~~~lPV~LDvgTnne~Ll~Dp~YlG~r~~R~~g~~y~~~idefv~av~~-~fGp~~lIq~EDf~~~~af 288 (464)
..|..+ |+| ...+.+|+. .++ +.++++.++. .|.+ ++..==-...++
T Consensus 32 ~~~~~~-gi~---~~y~~~~~~--~~~-----------------------l~~~i~~l~~~~~~G---~nVtiP~k~~i~ 79 (287)
T 1nvt_A 32 AAFKDK-GLN---YVYVAFDVL--PEN-----------------------LKYVIDGAKALGIVG---FNVTIPHKIEIM 79 (287)
T ss_dssp HHHHHT-TCC---EEEEEEECC--GGG-----------------------GGGHHHHHHHHTCCE---EEECTTSTTGGG
T ss_pred HHHHHc-CCC---cEEEEEEcC--HHH-----------------------HHHHHHHHHhCCCCE---EEEccCCHHHHH
Confidence 356666 798 777888874 232 3566666654 5655 555533333444
Q ss_pred HHHHHH----c--C--CCceeecC-ccchhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCC
Q 012398 289 ELLSKY----S--S--SHLVFNDD-IQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAP 359 (464)
Q Consensus 289 ~iL~ry----r--~--~~~~FnDD-iQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s 359 (464)
.++++. + . +..+++|. ..|+-. ...|++.+|+-.+.++++.+++|.|||.+|.++|..|.. .|
T Consensus 80 ~~~d~~~~~a~~igavnt~~~~~g~l~g~nT-d~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~~-----~G-- 151 (287)
T 1nvt_A 80 KYLDEIDKDAQLIGAVNTIKIEDGKAIGYNT-DGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAK-----DN-- 151 (287)
T ss_dssp GGCSEECHHHHHHTCCCEEEEETTEEEEECC-HHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTS-----SS--
T ss_pred HHHHhcCHHHHHhCceeeEEeeCCEEEEecC-CHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHH-----CC--
Confidence 444321 1 1 22233444 245322 678999999988889999999999999777777776643 12
Q ss_pred hhhhcCeEEEEccc
Q 012398 360 IEEARKKIWLVDSK 373 (464)
Q Consensus 360 ~~eA~~~i~lvD~~ 373 (464)
+++++|++
T Consensus 152 ------~V~v~~r~ 159 (287)
T 1nvt_A 152 ------NIIIANRT 159 (287)
T ss_dssp ------EEEEECSS
T ss_pred ------CEEEEECC
Confidence 68888874
No 44
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.04 E-value=0.036 Score=55.34 Aligned_cols=91 Identities=23% Similarity=0.303 Sum_probs=58.2
Q ss_pred HHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhh
Q 012398 313 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA 392 (464)
Q Consensus 313 LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa 392 (464)
-.|++.+|+-.+.++++.+++|+|||.+|.+||..|.. .|. ++|+++++.+ .+.+........+.
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~~----~~~~~a~~la~~~~ 202 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRKD----DFYANAEKTVEKIN 202 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECSS----TTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECCC----chHHHHHHHHHHhh
Confidence 46788888888999999999999999888888877764 353 5899998852 11111111111221
Q ss_pred hhc------CCC---CCHHHHHhcCCCcEEEeccCCC
Q 012398 393 HEH------API---KSLLDAVKAIKPTMLMGTSGVG 420 (464)
Q Consensus 393 ~~~------~~~---~~L~e~v~~vkptvLIG~S~~~ 420 (464)
... ... .+|.++++. +|++|-++..+
T Consensus 203 ~~~~~~~~~~~~~~~~~l~~~l~~--aDiIINaTp~G 237 (315)
T 3tnl_A 203 SKTDCKAQLFDIEDHEQLRKEIAE--SVIFTNATGVG 237 (315)
T ss_dssp HHSSCEEEEEETTCHHHHHHHHHT--CSEEEECSSTT
T ss_pred hhcCCceEEeccchHHHHHhhhcC--CCEEEECccCC
Confidence 110 011 236677776 99999776544
No 45
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=95.02 E-value=0.066 Score=56.79 Aligned_cols=110 Identities=17% Similarity=0.304 Sum_probs=77.6
Q ss_pred chhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCch
Q 012398 307 GTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH 386 (464)
Q Consensus 307 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~ 386 (464)
|+......|+ .+.+|..+...+++|+|.|..|.++|+.+.. .|+ +++.+|++.. +. +..
T Consensus 258 ~~~~~l~~gw---~~~~g~~L~GktVgIIG~G~IG~~vA~~l~~-----~G~-------~V~v~d~~~~----~~--~~a 316 (494)
T 3d64_A 258 GCRESLVDGI---KRATDVMIAGKIAVVAGYGDVGKGCAQSLRG-----LGA-------TVWVTEIDPI----CA--LQA 316 (494)
T ss_dssp HHHTTHHHHH---HHHHCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECSCHH----HH--HHH
T ss_pred hhhhhhhhhh---hhccccccCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCChH----hH--HHH
Confidence 3333444552 3568999999999999999999999998853 253 6888887521 00 000
Q ss_pred hchhhhhhcCCCCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 387 FKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 387 ~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
....-...+|.|+++. .|++|......+.++++.++.|. +..||.=.|...
T Consensus 317 -----~~~G~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gAilINvgrg~ 367 (494)
T 3d64_A 317 -----AMEGYRVVTMEYAADK--ADIFVTATGNYHVINHDHMKAMR---HNAIVCNIGHFD 367 (494)
T ss_dssp -----HTTTCEECCHHHHTTT--CSEEEECSSSSCSBCHHHHHHCC---TTEEEEECSSSS
T ss_pred -----HHcCCEeCCHHHHHhc--CCEEEECCCcccccCHHHHhhCC---CCcEEEEcCCCc
Confidence 0011112479999987 99999997667799999999995 577888777654
No 46
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.02 E-value=0.04 Score=54.92 Aligned_cols=91 Identities=26% Similarity=0.332 Sum_probs=58.6
Q ss_pred HHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhh
Q 012398 313 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA 392 (464)
Q Consensus 313 LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa 392 (464)
-.|++.+|+-.+.++++.+++|+|||.||.+|+..|.. .|. ++|+++++. ..+.+......+.+.
T Consensus 132 ~~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt----~~~~~~a~~la~~~~ 196 (312)
T 3t4e_A 132 GTGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK----DDFFEKAVAFAKRVN 196 (312)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS----STHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC----CchHHHHHHHHHHhh
Confidence 35778888888899999999999999888888887765 353 579998874 221111111112222
Q ss_pred hhc------CCCCCH---HHHHhcCCCcEEEeccCCC
Q 012398 393 HEH------APIKSL---LDAVKAIKPTMLMGTSGVG 420 (464)
Q Consensus 393 ~~~------~~~~~L---~e~v~~vkptvLIG~S~~~ 420 (464)
... .+..++ .+.++. +|++|-++..+
T Consensus 197 ~~~~~~v~~~~~~~l~~~~~~l~~--~DiIINaTp~G 231 (312)
T 3t4e_A 197 ENTDCVVTVTDLADQHAFTEALAS--ADILTNGTKVG 231 (312)
T ss_dssp HHSSCEEEEEETTCHHHHHHHHHH--CSEEEECSSTT
T ss_pred hccCcceEEechHhhhhhHhhccC--ceEEEECCcCC
Confidence 110 112344 667776 99999776654
No 47
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=94.78 E-value=0.043 Score=52.83 Aligned_cols=145 Identities=17% Similarity=0.340 Sum_probs=84.8
Q ss_pred HHHHHHHHHHhcCC--------CeeeeeecCCCccHHHHHH--HHcCCCceeecCccchhHHHHHHHHHHHHHhCCCCCc
Q 012398 260 LQEFMTAVKQNYGE--------KVLIQFEDFANHNAFELLS--KYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLAD 329 (464)
Q Consensus 260 idefv~av~~~fGp--------~~lIq~EDf~~~~af~iL~--ryr~~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d 329 (464)
+++|++.++..|.+ ..++.+=|- ++.|..+=. ....+ .=+|=|- .|++.+|+-. .+++
T Consensus 42 l~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~-~~~A~~iGAvNTi~~~-~G~NTD~--------~G~~~~l~~~--~~~~ 109 (253)
T 3u62_A 42 FDTEIRRILEEYDGFNATIPHKERVMRYVEP-SEDAQRIKAVNCVFRG-KGYNTDW--------VGVVKSLEGV--EVKE 109 (253)
T ss_dssp HHHHHHHHHHHCSEEEECTTCTTGGGGGSEE-CHHHHHHTCCCEEETT-EEECCHH--------HHHHHHTTTC--CCCS
T ss_pred HHHHHHHHhhCCCceeecCChHHHHHHHhCC-CHHHHHcCcceEeecC-EEEcchH--------HHHHHHHHhc--CCCC
Confidence 56777776654432 234555555 666654311 11111 2334442 3677777644 5788
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 409 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vk 409 (464)
+++|+|||.+|.+++..|.. .|. ++|+++|+. .++.+.+.. .|.. ....++.++++.
T Consensus 110 -~vliiGaGg~a~ai~~~L~~-----~G~------~~I~v~nR~----~~ka~~la~---~~~~--~~~~~~~~~~~~-- 166 (253)
T 3u62_A 110 -PVVVVGAGGAARAVIYALLQ-----MGV------KDIWVVNRT----IERAKALDF---PVKI--FSLDQLDEVVKK-- 166 (253)
T ss_dssp -SEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESC----HHHHHTCCS---SCEE--EEGGGHHHHHHT--
T ss_pred -eEEEECcHHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHHH---Hccc--CCHHHHHhhhcC--
Confidence 99999999999999888765 353 579999884 222222221 1110 122468888886
Q ss_pred CcEEEeccCCC-----CCCCHHHHHHHHcCCCCcEEEEcCC
Q 012398 410 PTMLMGTSGVG-----KTFTKEVVEAMASFNEKPVIFALSN 445 (464)
Q Consensus 410 ptvLIG~S~~~-----g~ft~evv~~Ma~~~erPIIFaLSN 445 (464)
+|++|-++..+ ..+.++.++ +..+|+-++-
T Consensus 167 aDiVInatp~gm~p~~~~i~~~~l~------~~~~V~Divy 201 (253)
T 3u62_A 167 AKSLFNTTSVGMKGEELPVSDDSLK------NLSLVYDVIY 201 (253)
T ss_dssp CSEEEECSSTTTTSCCCSCCHHHHT------TCSEEEECSS
T ss_pred CCEEEECCCCCCCCCCCCCCHHHhC------cCCEEEEeeC
Confidence 99999655432 235555542 5678887653
No 48
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.76 E-value=0.048 Score=54.24 Aligned_cols=101 Identities=20% Similarity=0.325 Sum_probs=67.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccC----CchhchhhhhhcCCC---CCHH
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKES----LQHFKKPWAHEHAPI---KSLL 402 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~----l~~~k~~fa~~~~~~---~~L~ 402 (464)
.||.|+|||+.|.++|.+|... |+ -+++++|.+- ++-+. +.+. ..+......+ .++.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~------~~V~L~D~~~----~~~~~~~~~l~~~-~~~~~~~~~i~~t~d~~ 73 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----EL------ADVVLYDVVK----GMPEGKALDLSHV-TSVVDTNVSVRAEYSYE 73 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SHHHHHHHHHHHH-HHHTTCCCCEEEECSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECCh----hHHHHHHHHHHhh-hhccCCCCEEEEeCCHH
Confidence 5899999999999999998763 54 1399999862 21110 1111 1111111122 6898
Q ss_pred HHHhcCCCcEEEeccCCC---CC----------------CCHHHHHHHHcCCCCcEEEEcCCCCC
Q 012398 403 DAVKAIKPTMLMGTSGVG---KT----------------FTKEVVEAMASFNEKPVIFALSNPTS 448 (464)
Q Consensus 403 e~v~~vkptvLIG~S~~~---g~----------------ft~evv~~Ma~~~erPIIFaLSNPt~ 448 (464)
+++++ +|++|=+.+.+ |. +-+++.+.|.+++++-+|+--|||..
T Consensus 74 ea~~~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~ 136 (331)
T 1pzg_A 74 AALTG--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLD 136 (331)
T ss_dssp HHHTT--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHH
T ss_pred HHhCC--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchH
Confidence 89987 99998554333 32 25788999999999989888899973
No 49
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.72 E-value=0.052 Score=54.32 Aligned_cols=96 Identities=21% Similarity=0.273 Sum_probs=63.8
Q ss_pred CCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhc----CCCCCHH
Q 012398 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH----APIKSLL 402 (464)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~----~~~~~L~ 402 (464)
++..+|+|+|||.+|.+++..+.. .| | +++++|++ ..| +...+..++... ....++.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~-----~G-----a--~V~v~dr~----~~r---~~~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVG-----LG-----A--QVQIFDIN----VER---LSYLETLFGSRVELLYSNSAEIE 225 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEEESC----HHH---HHHHHHHHGGGSEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCC----HHH---HHHHHHhhCceeEeeeCCHHHHH
Confidence 667899999999999999988764 35 2 68888874 121 222222222210 0112567
Q ss_pred HHHhcCCCcEEEeccCCCC-----CCCHHHHHHHHcCCCCcEEEEcCCC
Q 012398 403 DAVKAIKPTMLMGTSGVGK-----TFTKEVVEAMASFNEKPVIFALSNP 446 (464)
Q Consensus 403 e~v~~vkptvLIG~S~~~g-----~ft~evv~~Ma~~~erPIIFaLSNP 446 (464)
+.++. .|++|.+++.++ .++++.++.|. +.-+|+-++.+
T Consensus 226 ~~~~~--~DvVI~~~~~~~~~~~~li~~~~~~~~~---~g~~ivdv~~~ 269 (361)
T 1pjc_A 226 TAVAE--ADLLIGAVLVPGRRAPILVPASLVEQMR---TGSVIVDVAVD 269 (361)
T ss_dssp HHHHT--CSEEEECCCCTTSSCCCCBCHHHHTTSC---TTCEEEETTCT
T ss_pred HHHcC--CCEEEECCCcCCCCCCeecCHHHHhhCC---CCCEEEEEecC
Confidence 77775 999999887654 25899999885 45677777753
No 50
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=94.70 E-value=0.52 Score=47.90 Aligned_cols=167 Identities=19% Similarity=0.200 Sum_probs=108.4
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCcc--HHHHHHHHcC---CCcee---ecCccchhHHHHHHHHHHHHHhC
Q 012398 253 GQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHN--AFELLSKYSS---SHLVF---NDDIQGTASVVLAGILSALKLVG 324 (464)
Q Consensus 253 g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~--af~iL~ryr~---~~~~F---nDDiQGTaaV~LAgll~Alk~~g 324 (464)
..+-++++..|.+++.+..|+ -|-=+|++..- ---+.++|+. +-..+ .|--.-||-=+.-++-.+++..|
T Consensus 92 ~~~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G 169 (355)
T 1c1d_A 92 PSTWARILRIHAENIDKLSGN--YWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHRG 169 (355)
T ss_dssp HHHHHHHHHHHHHHHHHTTTS--EEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHHhcCC--cccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 345567788888888887765 47789997532 2235556651 11111 11112366666667778888889
Q ss_pred C-CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcC-CCCCHH
Q 012398 325 G-TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHA-PIKSLL 402 (464)
Q Consensus 325 ~-~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~-~~~~L~ 402 (464)
. +|++.+|+|.|.|..|..+|+.+.. .|. ++++.|++ ..| ..|++... ..-++.
T Consensus 170 ~~~L~GktV~I~G~GnVG~~~A~~l~~-----~Ga-------kVvvsD~~----~~~--------~~~a~~~ga~~v~~~ 225 (355)
T 1c1d_A 170 LGSLDGLTVLVQGLGAVGGSLASLAAE-----AGA-------QLLVADTD----TER--------VAHAVALGHTAVALE 225 (355)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC----HHH--------HHHHHHTTCEECCGG
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEeCC----ccH--------HHHHHhcCCEEeChH
Confidence 8 8999999999999999999998754 363 67788864 111 22332211 112444
Q ss_pred HHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCC
Q 012398 403 DAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PTSQSE 451 (464)
Q Consensus 403 e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN-Pt~~~E 451 (464)
+.++ ++.|+|+=++ ..+.++++.++.| +..+|.--+| |+..+|
T Consensus 226 ell~-~~~DIliP~A-~~~~I~~~~~~~l----k~~iVie~AN~p~t~~e 269 (355)
T 1c1d_A 226 DVLS-TPCDVFAPCA-MGGVITTEVARTL----DCSVVAGAANNVIADEA 269 (355)
T ss_dssp GGGG-CCCSEEEECS-CSCCBCHHHHHHC----CCSEECCSCTTCBCSHH
T ss_pred Hhhc-CccceecHhH-HHhhcCHHHHhhC----CCCEEEECCCCCCCCHH
Confidence 5443 4689999554 4569999999999 3578888888 653333
No 51
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.64 E-value=0.03 Score=54.87 Aligned_cols=87 Identities=20% Similarity=0.255 Sum_probs=56.8
Q ss_pred HHHHHHHHHhC-CCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhh
Q 012398 314 AGILSALKLVG-GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA 392 (464)
Q Consensus 314 Agll~Alk~~g-~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa 392 (464)
.|++.+++..+ .+++..+++|+|||.+|.++|..|.. .|. ++|+++|+. .++ .....+.+.
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~----~~k---a~~la~~~~ 186 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRT----VEK---AERLVREGD 186 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSS----HHH---HHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHH---HHHHHHHhh
Confidence 78888888877 78999999999999999988887764 353 578888874 121 111111111
Q ss_pred hhcCCC---CCHHHHHhcCCCcEEEeccCCC
Q 012398 393 HEHAPI---KSLLDAVKAIKPTMLMGTSGVG 420 (464)
Q Consensus 393 ~~~~~~---~~L~e~v~~vkptvLIG~S~~~ 420 (464)
...... .++.++++. +|++|-+...+
T Consensus 187 ~~~~~~~~~~~~~~~~~~--aDivIn~t~~~ 215 (297)
T 2egg_A 187 ERRSAYFSLAEAETRLAE--YDIIINTTSVG 215 (297)
T ss_dssp SSSCCEECHHHHHHTGGG--CSEEEECSCTT
T ss_pred hccCceeeHHHHHhhhcc--CCEEEECCCCC
Confidence 100011 246666665 99999887655
No 52
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.62 E-value=0.032 Score=54.30 Aligned_cols=102 Identities=16% Similarity=0.195 Sum_probs=63.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCch---hchhhhhhcCC--CCCHHHH
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH---FKKPWAHEHAP--IKSLLDA 404 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~---~k~~fa~~~~~--~~~L~e~ 404 (464)
.||.|+|||+.|.++|..|... |+ ...++++|++- ++.+.+.. +-..+...... ..++ ++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~-----~~~V~l~d~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~ 66 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GV-----ADDYVFIDANE----AKVKADQIDFQDAMANLEAHGNIVINDW-AA 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HHHHHHHHHHHHHGGGSSSCCEEEESCG-GG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEcCCH----HHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH
Confidence 3899999999999999988653 54 24799999851 11111110 00011100001 1456 77
Q ss_pred HhcCCCcEEEeccCCC-------CCC-----------CHHHHHHHHcCCCCcEEEEcCCCCC
Q 012398 405 VKAIKPTMLMGTSGVG-------KTF-----------TKEVVEAMASFNEKPVIFALSNPTS 448 (464)
Q Consensus 405 v~~vkptvLIG~S~~~-------g~f-----------t~evv~~Ma~~~erPIIFaLSNPt~ 448 (464)
++. +|++|=+...+ |-. -+++++.|.+++++.+|+-+|||..
T Consensus 67 ~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 126 (309)
T 1hyh_A 67 LAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVD 126 (309)
T ss_dssp GTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHH
T ss_pred hCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHH
Confidence 776 89888554432 211 2688999988888888888999983
No 53
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=94.62 E-value=0.7 Score=48.50 Aligned_cols=179 Identities=18% Similarity=0.195 Sum_probs=117.3
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCccH--HHHHHHHc---CC--CceeecC----------ccchhHHHHHH
Q 012398 253 GQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNA--FELLSKYS---SS--HLVFNDD----------IQGTASVVLAG 315 (464)
Q Consensus 253 g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~a--f~iL~ryr---~~--~~~FnDD----------iQGTaaV~LAg 315 (464)
-.+-..|-..||..+.+..||..-|-=+|++..-. --+.+.|+ .. .-++-.+ -.-||-=+.-+
T Consensus 137 ~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~~ 216 (449)
T 1bgv_A 137 DREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVYY 216 (449)
T ss_dssp HHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHHH
Confidence 34666777778989988899999999999987521 12334443 21 1222111 12365556667
Q ss_pred HHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCC-chhc----hh
Q 012398 316 ILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESL-QHFK----KP 390 (464)
Q Consensus 316 ll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l-~~~k----~~ 390 (464)
+-.+++..|.+|++.+|+|.|.|..|...|++|.+. |. +=+-+.|++|.|++.. .+ ++.+ ..
T Consensus 217 ~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~--Gi~d~edi~~l~~ 283 (449)
T 1bgv_A 217 VEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE--GITTEEKINYMLE 283 (449)
T ss_dssp HHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT--CSCSHHHHHHHHH
T ss_pred HHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC--cCCCHHHHHHHHH
Confidence 778888889999999999999999999999988663 42 2344799999988753 34 2211 11
Q ss_pred hhhhc-CCCCCH-----------HHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 012398 391 WAHEH-APIKSL-----------LDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 447 (464)
Q Consensus 391 fa~~~-~~~~~L-----------~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN-Pt 447 (464)
+.... ..+... .+ +-.++.|+|+=+.. ++.+|++-++.+.+ |...+|.--+| |+
T Consensus 284 ~k~~~~g~v~~y~~~~~a~~i~~~e-~~~~~~Dil~P~A~-~~~I~~~na~~l~a-~g~kiV~EgAN~p~ 350 (449)
T 1bgv_A 284 MRASGRNKVQDYADKFGVQFFPGEK-PWGQKVDIIMPCAT-QNDVDLEQAKKIVA-NNVKYYIEVANMPT 350 (449)
T ss_dssp HHHHCCCCTHHHHHHHTCEEEETCC-GGGSCCSEEECCSC-TTCBCHHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHhccCCChhhcccccCCEEeCchh-hhcCCcceeecccc-ccccchhhHHHHHh-cCCeEEEeCCCCcC
Confidence 11110 000000 12 22568999998775 56999999999964 23579998888 65
No 54
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=94.61 E-value=0.12 Score=52.57 Aligned_cols=159 Identities=14% Similarity=0.145 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHHHhcCCCeeeeeecCCCccHHHHHHHHcCCC-ceeec---------CccchhHHHHHHHHHHHHHh-CC
Q 012398 257 AELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSH-LVFND---------DIQGTASVVLAGILSALKLV-GG 325 (464)
Q Consensus 257 ~~~idefv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~-~~FnD---------DiQGTaaV~LAgll~Alk~~-g~ 325 (464)
++++..|.+++.+..|+ -|-=+|++..- +.+...-+++ ++.-- --.-||.=+.-++..+++.. |.
T Consensus 93 ~~~~r~~~~~~~~l~g~--~i~A~D~Gt~~--~~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~ 168 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR--YITAEDVGTTV--DDMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGS 168 (364)
T ss_dssp HHHHHHHHHHHHTTTTS--EEBCBCTTCCH--HHHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhcCc--eEEcccCCCCH--HHHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhccc
Confidence 45677778888887765 46678887533 2344443333 21111 11234444455556666664 76
Q ss_pred -CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHH
Q 012398 326 -TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDA 404 (464)
Q Consensus 326 -~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 404 (464)
+|++.+|+|.|+|..|..+|+.+.+ .|. ++++.|++ . +.+..+...|- ...-++.+.
T Consensus 169 ~~L~GktV~V~G~G~VG~~~A~~L~~-----~Ga-------kVvv~D~~------~-~~l~~~a~~~g---a~~v~~~~l 226 (364)
T 1leh_A 169 DSLEGLAVSVQGLGNVAKALCKKLNT-----EGA-------KLVVTDVN------K-AAVSAAVAEEG---ADAVAPNAI 226 (364)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC------H-HHHHHHHHHHC---CEECCGGGT
T ss_pred cCCCcCEEEEECchHHHHHHHHHHHH-----CCC-------EEEEEcCC------H-HHHHHHHHHcC---CEEEChHHH
Confidence 8999999999999999999999865 363 57788852 1 11222222221 111233343
Q ss_pred HhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 012398 405 VKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 447 (464)
Q Consensus 405 v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN-Pt 447 (464)
.. .+.|++|=++ ..+.++++.++.| ...+|.--+| |+
T Consensus 227 l~-~~~DIvip~a-~~~~I~~~~~~~l----g~~iV~e~An~p~ 264 (364)
T 1leh_A 227 YG-VTCDIFAPCA-LGAVLNDFTIPQL----KAKVIAGSADNQL 264 (364)
T ss_dssp TT-CCCSEEEECS-CSCCBSTTHHHHC----CCSEECCSCSCCB
T ss_pred hc-cCCcEeeccc-hHHHhCHHHHHhC----CCcEEEeCCCCCc
Confidence 33 5789999665 4559999988888 3567776777 54
No 55
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=94.49 E-value=0.047 Score=53.79 Aligned_cols=105 Identities=16% Similarity=0.252 Sum_probs=64.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCC-CCHHHHHhcC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI-KSLLDAVKAI 408 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~-~~L~e~v~~v 408 (464)
.||.|+|||..|.++|..+... |+ ...|+++|.+--..+....++.+. .++......+ .+..+++++
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-----~~-----~~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~~~al~~- 74 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-----GI-----ADEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDYDDCRD- 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCGGGTTT-
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeEEEcCcHHHhCC-
Confidence 5999999999999999776542 44 247999998521111000011111 1111100000 134567776
Q ss_pred CCcEEEeccCCCC--------------CCCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 409 KPTMLMGTSGVGK--------------TFTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 409 kptvLIG~S~~~g--------------~ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+|++|=+.+.+. ...+++++.|.++++..++|-.|||.
T Consensus 75 -aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv 126 (316)
T 1ldn_A 75 -ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPV 126 (316)
T ss_dssp -CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCch
Confidence 999985544332 24567888888888888888899997
No 56
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=94.34 E-value=0.11 Score=48.90 Aligned_cols=109 Identities=14% Similarity=0.206 Sum_probs=62.4
Q ss_pred hCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcc--cCCCccCCc-hhchhhhhhc--CC
Q 012398 323 VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI--VSSRKESLQ-HFKKPWAHEH--AP 397 (464)
Q Consensus 323 ~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl--~~~r~~~l~-~~k~~fa~~~--~~ 397 (464)
...++...||.|+|+|..|.++|..|... | .+++++|++--- .......+. ....+++... ..
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~-----G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADL-----G-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH 80 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee
Confidence 45578889999999999999999998753 5 268888875211 000000000 0012233221 12
Q ss_pred CCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHH-HcCCCCcEEEEcCCCC
Q 012398 398 IKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAM-ASFNEKPVIFALSNPT 447 (464)
Q Consensus 398 ~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~M-a~~~erPIIFaLSNPt 447 (464)
..++.|+++. +|++| ++.++. ...++++.+ +..-+..+|.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lavp~~-~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NATEGA-SSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECSCGG-GHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-EccCcH-HHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 3589999987 89888 444443 344666665 3333677999999974
No 57
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=94.19 E-value=0.29 Score=47.29 Aligned_cols=101 Identities=20% Similarity=0.234 Sum_probs=69.3
Q ss_pred HHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCC
Q 012398 319 ALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI 398 (464)
Q Consensus 319 Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~ 398 (464)
+++..+..|.+.+++|+|+|..|..+|+.+.. .|+ +++.+|+.- .+ ....+ .+--..-..
T Consensus 147 ~~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~-----~G~-------~V~~~d~~~----~~---~~~~~-~~g~~~~~~ 206 (300)
T 2rir_A 147 AIQHTDYTIHGSQVAVLGLGRTGMTIARTFAA-----LGA-------NVKVGARSS----AH---LARIT-EMGLVPFHT 206 (300)
T ss_dssp HHHTCSSCSTTSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSH----HH---HHHHH-HTTCEEEEG
T ss_pred HHHhcCCCCCCCEEEEEcccHHHHHHHHHHHH-----CCC-------EEEEEECCH----HH---HHHHH-HCCCeEEch
Confidence 34556889999999999999999999998864 253 688888741 11 11100 010000012
Q ss_pred CCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 012398 399 KSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 445 (464)
Q Consensus 399 ~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN 445 (464)
.+|.++++. +|++|-.... +.++++.++.|. +..+|+=+|.
T Consensus 207 ~~l~~~l~~--aDvVi~~~p~-~~i~~~~~~~mk---~g~~lin~a~ 247 (300)
T 2rir_A 207 DELKEHVKD--IDICINTIPS-MILNQTVLSSMT---PKTLILDLAS 247 (300)
T ss_dssp GGHHHHSTT--CSEEEECCSS-CCBCHHHHTTSC---TTCEEEECSS
T ss_pred hhHHHHhhC--CCEEEECCCh-hhhCHHHHHhCC---CCCEEEEEeC
Confidence 468888876 9999976654 699999888885 5678888886
No 58
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=94.18 E-value=0.36 Score=49.46 Aligned_cols=116 Identities=16% Similarity=0.195 Sum_probs=74.1
Q ss_pred CCceeecCc---cchhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 297 SHLVFNDDI---QGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 297 ~~~~FnDDi---QGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.|++.|.-- +.+|=-+++.+++..|-.|..|.+.+|.|+|.|..|-.+|+.+.. .|+ +++.+|+.
T Consensus 81 gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~~-----~G~-------~V~~~d~~ 148 (380)
T 2o4c_A 81 GIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRG-----LGW-------KVLVCDPP 148 (380)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECHH
T ss_pred CCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHHHHHHH-----CCC-------EEEEEcCC
Confidence 455555432 234445899999999999999999999999999999999998864 364 57888864
Q ss_pred CcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCCCcEEEecc---C-----CCCCCCHHHHHHHHcCCCCcEEEEcC
Q 012398 374 GLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS---G-----VGKTFTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 374 GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S---~-----~~g~ft~evv~~Ma~~~erPIIFaLS 444 (464)
.-- . . ......+|.|+++. .|+++=.- . ..+.|+++.++.|. +..++.=.|
T Consensus 149 ~~~-----~-------~---~g~~~~~l~ell~~--aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~s 207 (380)
T 2o4c_A 149 RQA-----R-------E---PDGEFVSLERLLAE--ADVISLHTPLNRDGEHPTRHLLDEPRLAALR---PGTWLVNAS 207 (380)
T ss_dssp HHH-----H-------S---TTSCCCCHHHHHHH--CSEEEECCCCCSSSSSCCTTSBCHHHHHTSC---TTEEEEECS
T ss_pred hhh-----h-------c---cCcccCCHHHHHHh--CCEEEEeccCccccccchhhhcCHHHHhhCC---CCcEEEECC
Confidence 210 0 0 00112456666665 66665431 1 22456666666664 345555444
No 59
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=94.12 E-value=0.015 Score=57.00 Aligned_cols=102 Identities=20% Similarity=0.302 Sum_probs=60.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCC--CCHHHHHhcC
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI--KSLLDAVKAI 408 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~--~~L~e~v~~v 408 (464)
||.|+|||+.|.++|..+.. .|+ ...++++|.+---..+...++.+.. +|... ... .+ .+++++
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~-----~~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~-~~i~~~~-~~a~~~- 67 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGS-----CSELVLVDRDEDRAQAEAEDIAHAA-PVSHG-TRVWHGG-HSELAD- 67 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHTTSC-CTTSC-CEEEEEC-GGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCCHHHHHHHHHhhhhhh-hhcCC-eEEEECC-HHHhCC-
Confidence 89999999999999987754 354 2479999985210000000011110 11111 001 23 366776
Q ss_pred CCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 409 KPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 409 kptvLIG~S~~~g~--------------ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+|++|=+.+.+.. +-+++++.|+++++.-+|+-.|||.
T Consensus 68 -aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~ 119 (304)
T 2v6b_A 68 -AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPV 119 (304)
T ss_dssp -CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCch
Confidence 9999855543321 2378889999888888888899997
No 60
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=94.09 E-value=0.3 Score=51.71 Aligned_cols=106 Identities=14% Similarity=0.210 Sum_probs=75.1
Q ss_pred HHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhh-cCCCC
Q 012398 321 KLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-HAPIK 399 (464)
Q Consensus 321 k~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~-~~~~~ 399 (464)
+..+..+.+.+|+|+|+|..|.++|+.+.. .|. +++.+|++- .+...|+. .-...
T Consensus 266 r~~~~~l~GktV~IiG~G~IG~~~A~~lka-----~Ga-------~Viv~d~~~------------~~~~~A~~~Ga~~~ 321 (494)
T 3ce6_A 266 RGTDALIGGKKVLICGYGDVGKGCAEAMKG-----QGA-------RVSVTEIDP------------INALQAMMEGFDVV 321 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCH------------HHHHHHHHTTCEEC
T ss_pred hccCCCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH------------HHHHHHHHcCCEEe
Confidence 446678899999999999999999998764 352 688888631 11111221 11124
Q ss_pred CHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHH
Q 012398 400 SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEA 457 (464)
Q Consensus 400 ~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpedA 457 (464)
++.++++. +|++|-+++..+.++++.++.|. +.-+|.-.+... .|+..+..
T Consensus 322 ~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk---~ggilvnvG~~~--~eId~~aL 372 (494)
T 3ce6_A 322 TVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK---DHAILGNIGHFD--NEIDMAGL 372 (494)
T ss_dssp CHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC---TTCEEEECSSSG--GGBCHHHH
T ss_pred cHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC---CCcEEEEeCCCC--CccCHHHH
Confidence 68888876 99999988877889999999995 566887777765 36655543
No 61
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=94.07 E-value=0.47 Score=50.56 Aligned_cols=179 Identities=21% Similarity=0.257 Sum_probs=118.2
Q ss_pred CChhhHHHHHHHHHHHHHH--hcCCCeeeeeecCCCccH--HHHHHHHcC---CC------ceeecCc---------cch
Q 012398 251 ATGQEYAELLQEFMTAVKQ--NYGEKVLIQFEDFANHNA--FELLSKYSS---SH------LVFNDDI---------QGT 308 (464)
Q Consensus 251 ~~g~~y~~~idefv~av~~--~fGp~~lIq~EDf~~~~a--f~iL~ryr~---~~------~~FnDDi---------QGT 308 (464)
.+-.|-..|.-.||..+.+ ..||..-|-=+|++..-. --+.+.|+. .. |+-..-+ .-|
T Consensus 136 ~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eAT 215 (501)
T 3mw9_A 136 YTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISAT 215 (501)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHH
T ss_pred CCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCch
Confidence 3567788889999999986 788988888999986432 236777752 11 1222221 124
Q ss_pred hHHHHHHHHH------HHHHhCC--CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCC
Q 012398 309 ASVVLAGILS------ALKLVGG--TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSR 380 (464)
Q Consensus 309 aaV~LAgll~------Alk~~g~--~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r 380 (464)
|-=+.-++-+ +++..|. .|++.||+|-|.|..|...|+.|.+ .|. +-+-+.|++|-|+...
T Consensus 216 g~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e-----~Ga------kVVavsDs~G~iyd~~ 284 (501)
T 3mw9_A 216 GRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHR-----FGA------KCITVGESDGSIWNPD 284 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHH-----TTC------EEEEEECSSCEEECTT
T ss_pred HHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHH-----CCC------EEEEEEcCCceEECCC
Confidence 4444444433 3456675 5899999999999999999999875 352 3455899999999764
Q ss_pred ccCCchhch-hhhhhcCCCC------CHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 012398 381 KESLQHFKK-PWAHEHAPIK------SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 447 (464)
Q Consensus 381 ~~~l~~~k~-~fa~~~~~~~------~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN-Pt 447 (464)
.++..+. .+......+. .+.+.+-.++.||||=+..+ +.+|++-++.+ .-.||.--+| |+
T Consensus 285 --Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~~-n~I~~~na~~l----~akiV~EgAN~p~ 352 (501)
T 3mw9_A 285 --GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASE-KQLTKSNAPRV----KAKIIAEGANGPT 352 (501)
T ss_dssp --CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSSS-CCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred --CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeecccc-CccCHhHHHHc----CceEEEeCCCCcC
Confidence 3543221 1221111110 01112455789999988876 69999998887 5789999999 54
No 62
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=94.02 E-value=0.025 Score=55.96 Aligned_cols=111 Identities=11% Similarity=0.051 Sum_probs=67.1
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc--Ccc--cCCCccCCchhchhhhhhcCCCCCHHHH
Q 012398 330 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK--GLI--VSSRKESLQHFKKPWAHEHAPIKSLLDA 404 (464)
Q Consensus 330 ~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~--GLl--~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 404 (464)
.||+|.|| |..|..++..|+. .|+-...-...++++|.+ ..- ..+...+|.+.-.+|..+-....++.++
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA 80 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH
Confidence 58999998 9999998887764 243111112479999975 100 0000000111101221111112579999
Q ss_pred HhcCCCcEEEeccCCC---C-----------CCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 012398 405 VKAIKPTMLMGTSGVG---K-----------TFTKEVVEAMASFN-EKPVIFALSNPT 447 (464)
Q Consensus 405 v~~vkptvLIG~S~~~---g-----------~ft~evv~~Ma~~~-erPIIFaLSNPt 447 (464)
+++ +|++|=+.+.+ | ..++++++.+.+++ .+.+|+-.|||.
T Consensus 81 l~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv 136 (329)
T 1b8p_A 81 FKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA 136 (329)
T ss_dssp TTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch
Confidence 998 89988555443 2 13678999999986 787777789997
No 63
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=93.84 E-value=0.68 Score=45.63 Aligned_cols=121 Identities=17% Similarity=0.124 Sum_probs=76.9
Q ss_pred CCCceeecCcc---chhHHHHHHHHHHHHH----------------hCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhc
Q 012398 296 SSHLVFNDDIQ---GTASVVLAGILSALKL----------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQT 356 (464)
Q Consensus 296 ~~~~~FnDDiQ---GTaaV~LAgll~Alk~----------------~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~ 356 (464)
..+++.|---- .+|=-+++.+|+..|- .+..+.+.+|.|+|.|..|..+|+.+.. .
T Consensus 90 ~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~-----~ 164 (313)
T 2ekl_A 90 RNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANA-----M 164 (313)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHH-----T
T ss_pred CCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHH-----C
Confidence 35666664322 3444578888888764 3578999999999999999999998864 2
Q ss_pred CCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCCCcEEEeccC----CCCCCCHHHHHHHH
Q 012398 357 KAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVEAMA 432 (464)
Q Consensus 357 G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~ft~evv~~Ma 432 (464)
|+ +++.+|+.. . . . .. ....-...++.|+++. .|+++=.-- ..+.++++.++.|.
T Consensus 165 G~-------~V~~~d~~~----~--~-~-~~----~~~g~~~~~l~ell~~--aDvVvl~~P~~~~t~~li~~~~l~~mk 223 (313)
T 2ekl_A 165 GM-------KVLAYDILD----I--R-E-KA----EKINAKAVSLEELLKN--SDVISLHVTVSKDAKPIIDYPQFELMK 223 (313)
T ss_dssp TC-------EEEEECSSC----C--H-H-HH----HHTTCEECCHHHHHHH--CSEEEECCCCCTTSCCSBCHHHHHHSC
T ss_pred CC-------EEEEECCCc----c--h-h-HH----HhcCceecCHHHHHhh--CCEEEEeccCChHHHHhhCHHHHhcCC
Confidence 54 688888642 1 0 0 00 0000011368888876 787774321 23467788888875
Q ss_pred cCCCCcEEEEcCC
Q 012398 433 SFNEKPVIFALSN 445 (464)
Q Consensus 433 ~~~erPIIFaLSN 445 (464)
+..++.-.|.
T Consensus 224 ---~ga~lIn~ar 233 (313)
T 2ekl_A 224 ---DNVIIVNTSR 233 (313)
T ss_dssp ---TTEEEEESSC
T ss_pred ---CCCEEEECCC
Confidence 4567766665
No 64
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=93.81 E-value=0.097 Score=55.24 Aligned_cols=105 Identities=15% Similarity=0.224 Sum_probs=66.0
Q ss_pred cceEEEeCcchHH--HHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhh---cCC---CCC
Q 012398 329 DQTFLFLGAGEAG--TGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE---HAP---IKS 400 (464)
Q Consensus 329 d~riv~~GAGsAg--~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~---~~~---~~~ 400 (464)
..||.|+|||+.| .++|..|+.. .++ +...++|+|.+- ++.+........+... ... ..+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~----e~l~~~~~~~~~~l~~~~~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDE----ERLDAILTIAKKYVEEVGADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCH----HHHHHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCcEEEEECC
Confidence 3589999999965 5456666531 122 236799999853 2111111111222111 111 258
Q ss_pred HHHHHhcCCCcEEEeccCC---------------CCCCC-------------------------HHHHHHHHcCCCCcEE
Q 012398 401 LLDAVKAIKPTMLMGTSGV---------------GKTFT-------------------------KEVVEAMASFNEKPVI 440 (464)
Q Consensus 401 L~e~v~~vkptvLIG~S~~---------------~g~ft-------------------------~evv~~Ma~~~erPII 440 (464)
+.+++++ +|++|=..+. .|.|. +++++.|.++|+..+|
T Consensus 71 ~~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~i 148 (480)
T 1obb_A 71 LDDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY 148 (480)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEE
Confidence 9899997 9998855432 12322 6899999999999999
Q ss_pred EEcCCCC
Q 012398 441 FALSNPT 447 (464)
Q Consensus 441 FaLSNPt 447 (464)
+-.|||.
T Consensus 149 i~~TNPv 155 (480)
T 1obb_A 149 LQAANPI 155 (480)
T ss_dssp EECSSCH
T ss_pred EEeCCcH
Confidence 9999998
No 65
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.80 E-value=0.1 Score=51.51 Aligned_cols=100 Identities=17% Similarity=0.239 Sum_probs=65.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhh-cCCCCCHHHHHhcC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-HAPIKSLLDAVKAI 408 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~-~~~~~~L~e~v~~v 408 (464)
.||.|+|||..|.++|..++.. |+ ...++|+|.+-= ..+...++.. +... .....++ +++++
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~-----~~ev~L~Di~~~-~~g~a~dl~~----~~~~~i~~t~d~-~~l~~- 77 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GI-----ADRLVLLDLSEG-TKGATMDLEI----FNLPNVEISKDL-SASAH- 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECCC------CHHHHHH----HTCTTEEEESCG-GGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CC-----CCEEEEEcCCcc-hHHHHHHHhh----hcCCCeEEeCCH-HHHCC-
Confidence 6899999999999999988643 54 357999998631 1111101221 2111 0111467 77887
Q ss_pred CCcEEEeccCCC--C-----------CCCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 409 KPTMLMGTSGVG--K-----------TFTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 409 kptvLIG~S~~~--g-----------~ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+|++|=..+.+ | .+-+++++.|.++++.-+|+-.|||.
T Consensus 78 -aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~ 128 (303)
T 2i6t_A 78 -SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPV 128 (303)
T ss_dssp -CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChH
Confidence 99998554432 1 12468899999999999988899998
No 66
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.70 E-value=0.058 Score=53.51 Aligned_cols=100 Identities=17% Similarity=0.265 Sum_probs=64.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCcc----CCchhchhhhhhcCCC---CCHH
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKE----SLQHFKKPWAHEHAPI---KSLL 402 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~----~l~~~k~~fa~~~~~~---~~L~ 402 (464)
.||.|+|||+.|.++|.++.. .|+- +++++|.+ .++-+ .+.+. ..+......+ .++
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~-----~g~~------~v~L~Di~----~~~l~~~~~~l~~~-~~~~~~~~~i~~t~d~- 67 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQ-----KNLG------DVVLFDIV----KNMPHGKALDTSHT-NVMAYSNCKVSGSNTY- 67 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSS----SSHHHHHHHHHHTH-HHHHTCCCCEEEECCG-
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEeCC----HHHHHHHHHHHHhh-hhhcCCCcEEEECCCH-
Confidence 489999999999999998875 3541 39999975 22111 11111 0111111111 467
Q ss_pred HHHhcCCCcEEEeccCCC---CC----------------CCHHHHHHHHcCCCCcEEEEcCCCCC
Q 012398 403 DAVKAIKPTMLMGTSGVG---KT----------------FTKEVVEAMASFNEKPVIFALSNPTS 448 (464)
Q Consensus 403 e~v~~vkptvLIG~S~~~---g~----------------ft~evv~~Ma~~~erPIIFaLSNPt~ 448 (464)
+++++ +|++|=+.+.+ |. +-+++.+.|.+++++-+|+-.|||..
T Consensus 68 ~al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~ 130 (322)
T 1t2d_A 68 DDLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVD 130 (322)
T ss_dssp GGGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChH
Confidence 88887 99998554333 31 46788899999999988877899983
No 67
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=93.65 E-value=0.11 Score=50.03 Aligned_cols=36 Identities=14% Similarity=0.274 Sum_probs=28.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
..||.|+|+|..|.++|..+.. .|.+ ..+|+++|++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~-----~g~~----~~~V~v~dr~ 38 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIA-----NGYD----PNRICVTNRS 38 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHH-----TTCC----GGGEEEECSS
T ss_pred CCEEEEEcccHHHHHHHHHHHH-----CCCC----CCeEEEEeCC
Confidence 4689999999999999998876 3653 3468888874
No 68
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=93.59 E-value=0.068 Score=55.99 Aligned_cols=105 Identities=11% Similarity=0.228 Sum_probs=66.9
Q ss_pred CcceEEEeCcchH--HHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhc---CCCCCHH
Q 012398 328 ADQTFLFLGAGEA--GTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH---APIKSLL 402 (464)
Q Consensus 328 ~d~riv~~GAGsA--g~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~---~~~~~L~ 402 (464)
+..||.|+|||+. |.|++..|+.. ..+ . ..|+|+|.+- ++-+.+....+.+.+.. .-..++.
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~----e~le~~~~~~~~l~~~~~~I~~TtD~~ 70 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDF----EAAQKNEVIGNHSGNGRWRYEAVSTLK 70 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSH----HHHHHHHHHHTTSTTSCEEEEEESSHH
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCH----HHHHHHHHHHHHHhccCCeEEEECCHH
Confidence 4579999999995 78999888742 222 2 3899999751 11000000000111100 1125899
Q ss_pred HHHhcCCCcEEEeccCCC---------------CC---------------------CCHHHHHHHHcCCCCcEEEEcCCC
Q 012398 403 DAVKAIKPTMLMGTSGVG---------------KT---------------------FTKEVVEAMASFNEKPVIFALSNP 446 (464)
Q Consensus 403 e~v~~vkptvLIG~S~~~---------------g~---------------------ft~evv~~Ma~~~erPIIFaLSNP 446 (464)
||+++ +|++|=.-.++ |. .-.++++.|.+++++.+++-.|||
T Consensus 71 eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNP 148 (450)
T 3fef_A 71 KALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNP 148 (450)
T ss_dssp HHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSS
T ss_pred HHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence 99998 99988433221 11 246788889999999999999999
Q ss_pred C
Q 012398 447 T 447 (464)
Q Consensus 447 t 447 (464)
.
T Consensus 149 v 149 (450)
T 3fef_A 149 M 149 (450)
T ss_dssp H
T ss_pred h
Confidence 8
No 69
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.59 E-value=0.047 Score=54.21 Aligned_cols=104 Identities=18% Similarity=0.340 Sum_probs=63.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCC---CCHHHHHh
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI---KSLLDAVK 406 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~---~~L~e~v~ 406 (464)
.||.|+|||+.|.++|..+.. .|+- +++++|.+-=........+.+.. .+......+ .++ ++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~-----~g~~------~V~L~Di~~~~l~~~~~~l~~~~-~~~~~~~~i~~t~d~-~al~ 81 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ-----KDLG------DVYMFDIIEGVPQGKALDLNHCM-ALIGSPAKIFGENNY-EYLQ 81 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSTTHHHHHHHHHHHHH-HHHTCCCCEEEESCG-GGGT
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEECCHHHHHHHHHHHHhHh-hccCCCCEEEECCCH-HHHC
Confidence 589999999999999987765 3541 39999985211110000111111 111111111 467 7888
Q ss_pred cCCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCC
Q 012398 407 AIKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPTS 448 (464)
Q Consensus 407 ~vkptvLIG~S~~~---g~-----------ft~evv~~Ma~~~erPIIFaLSNPt~ 448 (464)
+ +|++|=+.+.+ |. +.+++.+.+.++++.-+|+--|||.+
T Consensus 82 ~--aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~ 135 (328)
T 2hjr_A 82 N--SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLD 135 (328)
T ss_dssp T--CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHH
T ss_pred C--CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchH
Confidence 7 99988554322 21 25678888888898888776799983
No 70
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.58 E-value=0.056 Score=52.91 Aligned_cols=100 Identities=13% Similarity=0.289 Sum_probs=65.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccC----CchhchhhhhhcCCC---CCHH
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKES----LQHFKKPWAHEHAPI---KSLL 402 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~----l~~~k~~fa~~~~~~---~~L~ 402 (464)
.||.|+|||+.|.++|..+... |+ .+++++|.+- ++.+. +... ..+......+ .++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~------~~V~l~D~~~----~~~~~~~~~l~~~-~~~~~~~~~i~~t~d~- 67 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NL------ADVVLFDIAE----GIPQGKALDITHS-MVMFGSTSKVIGTDDY- 67 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SHHHHHHHHHHHH-HHHHTCCCCEEEESCG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCc----hHHHHHHHHHHhh-hhhcCCCcEEEECCCH-
Confidence 5899999999999999998764 54 1499999852 21110 1000 0111111111 456
Q ss_pred HHHhcCCCcEEEeccCCCC--------------CCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 012398 403 DAVKAIKPTMLMGTSGVGK--------------TFTKEVVEAMASFNEKPVIFALSNPTS 448 (464)
Q Consensus 403 e~v~~vkptvLIG~S~~~g--------------~ft~evv~~Ma~~~erPIIFaLSNPt~ 448 (464)
++++. +|++|=+.+.+. .+.+++++.+.++++.-||+-.|||..
T Consensus 68 ~a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~ 125 (317)
T 2ewd_A 68 ADISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLD 125 (317)
T ss_dssp GGGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHH
Confidence 77876 999885554332 135788888988889999999999973
No 71
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=93.47 E-value=0.037 Score=54.24 Aligned_cols=102 Identities=17% Similarity=0.266 Sum_probs=64.4
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc--cCcccCCCccCCchhchhhhhhcCCC--CCHHHHH
Q 012398 331 TFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS--KGLIVSSRKESLQHFKKPWAHEHAPI--KSLLDAV 405 (464)
Q Consensus 331 riv~~G-AGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~--~GLl~~~r~~~l~~~k~~fa~~~~~~--~~L~e~v 405 (464)
||+|.| ||..|..++..|+. .|+ ...++++|. +-=-.++-..++.+... +..+ ..+ .+ .+++
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~-~~v~~~~-~~a~ 68 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIAL-----RDI-----ADEVVFVDIPDKEDDTVGQAADTNHGIA-YDSN-TRVRQGG-YEDT 68 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTC-----CSEEEEECCGGGHHHHHHHHHHHHHHHT-TTCC-CEEEECC-GGGG
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEcCCCChhhHHHHHHHHHHHHh-hCCC-cEEEeCC-HHHh
Confidence 899999 99999999887754 243 246999997 31000000001211110 1110 000 23 6678
Q ss_pred hcCCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 406 KAIKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 406 ~~vkptvLIG~S~~~---g~-----------ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
++ +|++|=+.+.+ |- .++++++.|.+++.+.+|+--|||.
T Consensus 69 ~~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv 122 (303)
T 1o6z_A 69 AG--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV 122 (303)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH
T ss_pred CC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH
Confidence 87 99998665544 32 5778999999999999999999997
No 72
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.41 E-value=0.1 Score=45.13 Aligned_cols=102 Identities=15% Similarity=0.156 Sum_probs=54.1
Q ss_pred CCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCc-hhchhhhh-hcCCCCCHH
Q 012398 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ-HFKKPWAH-EHAPIKSLL 402 (464)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~-~~k~~fa~-~~~~~~~L~ 402 (464)
+++...+|+|+|+|..|..+|+.+.. .| .+++++|++- .+.+.+. .....+.. +......|.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~-----~g-------~~V~vid~~~----~~~~~~~~~~g~~~~~~d~~~~~~l~ 78 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASS-----SG-------HSVVVVDKNE----YAFHRLNSEFSGFTVVGDAAEFETLK 78 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESCG----GGGGGSCTTCCSEEEESCTTSHHHHH
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECCH----HHHHHHHhcCCCcEEEecCCCHHHHH
Confidence 45567899999999999999998864 24 2688898752 2111121 11111111 100101233
Q ss_pred HH-HhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 012398 403 DA-VKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 445 (464)
Q Consensus 403 e~-v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN 445 (464)
++ ++ ++|++|-+.... .....+++.+.+.+....|++.+|
T Consensus 79 ~~~~~--~ad~Vi~~~~~~-~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 79 ECGME--KADMVFAFTNDD-STNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp TTTGG--GCSEEEECSSCH-HHHHHHHHHHHHTSCCSEEEEECS
T ss_pred HcCcc--cCCEEEEEeCCc-HHHHHHHHHHHHHCCCCeEEEEEC
Confidence 33 44 489999776643 334444444333355555665555
No 73
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=93.41 E-value=0.051 Score=54.15 Aligned_cols=106 Identities=17% Similarity=0.262 Sum_probs=65.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI 408 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~v 408 (464)
..||.|+|||..|..+|-+|+.. ++ ...|+++|.+-=-..+...+|.+. .+|..+..-..+..+++++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~-~~~~~~~~i~~~~~~a~~~- 76 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLSNA-LPFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGGG-
T ss_pred CCEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHhHHHHHHHHHH-HHhcCCeEEEECCHHHhCC-
Confidence 36999999999999998887542 44 358999998410000000012111 1222110000234677887
Q ss_pred CCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 409 KPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 409 kptvLIG~S~~~g~--------------ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+|++|=+.+.+.. +-+++++.|.++++..+|+-.|||.
T Consensus 77 -aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 128 (326)
T 2zqz_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp -CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 9999855554421 2356778888889999999999997
No 74
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=93.39 E-value=0.5 Score=48.50 Aligned_cols=117 Identities=12% Similarity=0.149 Sum_probs=80.0
Q ss_pred CCceeecCc---cchhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 297 SHLVFNDDI---QGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 297 ~~~~FnDDi---QGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.|.+.|--- +.+|=-+++.+|+..|-.|..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.
T Consensus 84 gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a-----~G~-------~V~~~d~~ 151 (381)
T 3oet_A 84 GIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEA-----LGI-------RTLLCDPP 151 (381)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECHH
T ss_pred CEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHH-----CCC-------EEEEECCC
Confidence 455555432 245556899999999999999999999999999999999999864 365 57888763
Q ss_pred CcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCCCcEEEecc----C----CCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 012398 374 GLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----G----VGKTFTKEVVEAMASFNEKPVIFALSN 445 (464)
Q Consensus 374 GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S----~----~~g~ft~evv~~Ma~~~erPIIFaLSN 445 (464)
. . . .. ......+|.|+++. .|+++=.- . ..+.|+++.++.|. +..|+.=.|.
T Consensus 152 ~----~--~-~~--------~~~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~aR 211 (381)
T 3oet_A 152 R----A--A-RG--------DEGDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK---PGAILINACR 211 (381)
T ss_dssp H----H--H-TT--------CCSCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC---TTEEEEECSC
T ss_pred h----H--H-hc--------cCcccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC---CCcEEEECCC
Confidence 1 0 0 00 11123578888876 78776332 1 23477888888884 5667665554
No 75
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.36 E-value=0.12 Score=51.71 Aligned_cols=96 Identities=23% Similarity=0.344 Sum_probs=60.4
Q ss_pred CCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhh----cCCCCCHH
Q 012398 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE----HAPIKSLL 402 (464)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~----~~~~~~L~ 402 (464)
++..+|+|+|+|..|..+|+.+.. .|. +++++|++- ++ +...+..+... .....++.
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~-----~Ga-------~V~~~d~~~----~~---~~~~~~~~g~~~~~~~~~~~~l~ 224 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALG-----MGA-------QVTILDVNH----KR---LQYLDDVFGGRVITLTATEANIK 224 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSEEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHHHHHhcCceEEEecCCHHHHH
Confidence 778999999999999999998764 352 688888741 11 11111111110 01123577
Q ss_pred HHHhcCCCcEEEeccCCCC-----CCCHHHHHHHHcCCCCcEEEEcCCC
Q 012398 403 DAVKAIKPTMLMGTSGVGK-----TFTKEVVEAMASFNEKPVIFALSNP 446 (464)
Q Consensus 403 e~v~~vkptvLIG~S~~~g-----~ft~evv~~Ma~~~erPIIFaLSNP 446 (464)
++++. .|++|.+.+.++ .++++.++.|. +.-+|.-+|.+
T Consensus 225 ~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk---~gg~iV~v~~~ 268 (369)
T 2eez_A 225 KSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK---EGAVIVDVAVD 268 (369)
T ss_dssp HHHHH--CSEEEECCC-------CCSCHHHHTTSC---TTCEEEECC--
T ss_pred HHHhC--CCEEEECCCCCccccchhHHHHHHHhhc---CCCEEEEEecC
Confidence 88886 999998876543 46999999995 34566666654
No 76
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=93.33 E-value=0.074 Score=55.51 Aligned_cols=107 Identities=15% Similarity=0.234 Sum_probs=67.5
Q ss_pred ceEEEeCcchH-HHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh--hcC-C---CCCHH
Q 012398 330 QTFLFLGAGEA-GTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH--EHA-P---IKSLL 402 (464)
Q Consensus 330 ~riv~~GAGsA-g~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~--~~~-~---~~~L~ 402 (464)
.||.|+|||+. +.+++..|+.. ..++. ...++|+|.+-- +++.+.+......+.. ..+ . ..++.
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~----~~ev~L~Di~~~--~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~ 78 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELP----VGELWLVDIPEG--KEKLEIVGALAKRMVEKAGVPIEIHLTLDRR 78 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCC----EEEEEEECCGGG--HHHHHHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCC----CCEEEEEEcCCC--hHHHHHHHHHHHHHHhhcCCCcEEEEeCCHH
Confidence 69999999997 55555555431 13442 357999998520 0211111111122211 111 1 15899
Q ss_pred HHHhcCCCcEEEeccCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 403 DAVKAIKPTMLMGTSGVGKT----------------------------------FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 403 e~v~~vkptvLIG~S~~~g~----------------------------------ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+++++ +|++|=..+.++. +=+++++.|.++|++.+|+-.|||.
T Consensus 79 eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPv 155 (450)
T 1s6y_A 79 RALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPA 155 (450)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred HHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 99998 9999866554421 2358899999999999999999998
No 77
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=93.33 E-value=0.051 Score=53.69 Aligned_cols=107 Identities=13% Similarity=0.254 Sum_probs=66.6
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCC-CCHHHHHh
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI-KSLLDAVK 406 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~-~~L~e~v~ 406 (464)
...||.|+|||..|..+|-.|... |+ ...++++|.+-=...+...++.+. .+|....-.. .+..++++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~-----~~-----~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a~~ 73 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ-----SI-----VDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSDCH 73 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----CS-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGGGT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHHhC
Confidence 456999999999999998876542 44 257999997510000100012222 2232110011 13477788
Q ss_pred cCCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 407 AIKPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 407 ~vkptvLIG~S~~~g~--------------ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+ +|++|=+.+.+.. +=+++++.|.++++..+|+-.|||.
T Consensus 74 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (317)
T 3d0o_A 74 D--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPV 126 (317)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred C--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 7 9999855544421 2256778888899999999999997
No 78
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=93.31 E-value=0.062 Score=53.26 Aligned_cols=105 Identities=14% Similarity=0.207 Sum_probs=64.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 409 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vk 409 (464)
.||.|+|||..|..+|-+|+.. ++ ...|+++|.+-=-..+-..++.+. .+|..+..-..+..+++++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~-~~~~~~~~v~~~~~~a~~~-- 72 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVVKDRTKGDALDLEDA-QAFTAPKKIYSGEYSDCKD-- 72 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHGG-GGGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHHHHHHHHHHHH-HHhcCCeEEEECCHHHhCC--
Confidence 6999999999999998887543 44 358999998410000000012111 1232110000234677887
Q ss_pred CcEEEeccCCC---C-----------CCCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 410 PTMLMGTSGVG---K-----------TFTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 410 ptvLIG~S~~~---g-----------~ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+|++|=+.+.+ | .+-+++++.|.+++...+|+-.|||.
T Consensus 73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 124 (318)
T 1ez4_A 73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPV 124 (318)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcH
Confidence 99998555443 2 12356778888899999999999997
No 79
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=93.16 E-value=0.075 Score=53.27 Aligned_cols=107 Identities=17% Similarity=0.246 Sum_probs=66.4
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhc
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKA 407 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~ 407 (464)
...||.|+|||..|..+|..|+.. |+ ...+.++|.+-=...+-.-+|.+. .+|.....-..+..+++++
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~i~~~~~~a~~~ 76 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLEDA-LPFTSPKKIYSAEYSDAKD 76 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCChHHHHHHHhhHhhh-hhhcCCcEEEECcHHHhcC
Confidence 346899999999999999988763 54 258999998311011000012221 1232110001233567776
Q ss_pred CCCcEEEeccCCC---C-----CC------CHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 408 IKPTMLMGTSGVG---K-----TF------TKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 408 vkptvLIG~S~~~---g-----~f------t~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+|++|=+.+.+ | +| -+++++.|++++++.+|+-.|||.
T Consensus 77 --aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPv 128 (326)
T 3vku_A 77 --ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp --CSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSSH
T ss_pred --CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCch
Confidence 89887444333 2 22 368889999999999999999997
No 80
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=93.12 E-value=0.12 Score=50.69 Aligned_cols=104 Identities=20% Similarity=0.306 Sum_probs=66.9
Q ss_pred HHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh
Q 012398 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 393 (464)
Q Consensus 314 Agll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~ 393 (464)
.|++.+|+-.|.++++.+++|+|||.||.+++..|.. .|. ++|+++++. .++...+. ..|.
T Consensus 107 ~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~-----~G~------~~v~v~nRt----~~ka~~La---~~~~- 167 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKD-----NFA------KDIYVVTRN----PEKTSEIY---GEFK- 167 (282)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHH-----TTC------SEEEEEESC----HHHHHHHC---TTSE-
T ss_pred HHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHH---HhcC-
Confidence 7889999988999999999999999998888887765 353 579988874 22211111 1110
Q ss_pred hcCCCCCHHHHHhcCCCcEEEeccCCC---C----CCCHHHHHHHHcCCCCcEEEEcC-CCC
Q 012398 394 EHAPIKSLLDAVKAIKPTMLMGTSGVG---K----TFTKEVVEAMASFNEKPVIFALS-NPT 447 (464)
Q Consensus 394 ~~~~~~~L~e~v~~vkptvLIG~S~~~---g----~ft~evv~~Ma~~~erPIIFaLS-NPt 447 (464)
..++.+.-+ +++|++|-++..+ . .+..+.++ +..+||=+. ||.
T Consensus 168 ----~~~~~~l~~-l~~DivInaTp~Gm~~~~~~~pi~~~~l~------~~~~v~DlvY~P~ 218 (282)
T 3fbt_A 168 ----VISYDELSN-LKGDVIINCTPKGMYPKEGESPVDKEVVA------KFSSAVDLIYNPV 218 (282)
T ss_dssp ----EEEHHHHTT-CCCSEEEECSSTTSTTSTTCCSSCHHHHT------TCSEEEESCCSSS
T ss_pred ----cccHHHHHh-ccCCEEEECCccCccCCCccCCCCHHHcC------CCCEEEEEeeCCC
Confidence 012222212 3699999776543 1 24555543 567888765 774
No 81
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=93.04 E-value=0.15 Score=49.94 Aligned_cols=99 Identities=19% Similarity=0.204 Sum_probs=64.0
Q ss_pred HHHHHHHHH-HhcCCCeeeeeecCCCccHHHHHHHHcC--------CCceeecC--ccchhHHHHHHHHHHHHHhCCCCC
Q 012398 260 LQEFMTAVK-QNYGEKVLIQFEDFANHNAFELLSKYSS--------SHLVFNDD--IQGTASVVLAGILSALKLVGGTLA 328 (464)
Q Consensus 260 idefv~av~-~~fGp~~lIq~EDf~~~~af~iL~ryr~--------~~~~FnDD--iQGTaaV~LAgll~Alk~~g~~l~ 328 (464)
+.++++.++ ..|.+ ++.--=-...+++++++... +..++++| ..|.-.= ..|++.+|+-.|.+++
T Consensus 50 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~ld~l~~~A~~iGAVNTv~~~~~g~l~G~NTD-~~G~~~~L~~~~~~l~ 125 (281)
T 3o8q_A 50 FTEAAKHFFAQGGRG---CNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTD-GEGLVQDLLAQQVLLK 125 (281)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTSHHHHHHHCSEECHHHHHHTCCSEEEECTTSCEEEECCH-HHHHHHHHHHTTCCCT
T ss_pred HHHHHHHHHhCCCCE---EEECCccHHHHHHHHhhcCHHHHhhCeeeEEEEcCCCcEEEEecH-HHHHHHHHHHhCCCcc
Confidence 567777765 35655 54433333445666655431 22344554 3442221 4678888888899999
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+.+++|+|||.+|.+++..|.. .|. ++|+++++.
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNRT 159 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEESS
T ss_pred CCEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEECC
Confidence 9999999999888888877754 353 579988874
No 82
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.95 E-value=0.1 Score=51.52 Aligned_cols=100 Identities=23% Similarity=0.357 Sum_probs=62.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCcc----CCchhchhhhhhcC-CCCCHHHH
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKE----SLQHFKKPWAHEHA-PIKSLLDA 404 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~----~l~~~k~~fa~~~~-~~~~L~e~ 404 (464)
.||.|+|||..|..+|-.|.. .|+ ...++++|.+ .++.+ ++.+.. +|.++.. ...+ .++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~ev~L~Di~----~~~~~g~~~dl~~~~-~~~~~~~i~~~~-~~a 71 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL-----RQT-----ANELVLIDVF----KEKAIGEAMDINHGL-PFMGQMSLYAGD-YSD 71 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-----SSEEEEECCC-------CCHHHHHHTTSC-CCTTCEEEC--C-GGG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCC----hHHHHHHHHHHHHhH-HhcCCeEEEECC-HHH
Confidence 589999999999998888754 244 2479999985 22211 111111 1211100 0123 566
Q ss_pred HhcCCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 405 VKAIKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 405 v~~vkptvLIG~S~~~---g~-----------ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+++ +|++|=+.+.+ |- +-+++++.|+++++..+|+-.|||.
T Consensus 72 ~~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (318)
T 1y6j_A 72 VKD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPV 126 (318)
T ss_dssp GTT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSH
T ss_pred hCC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 776 99998555444 21 1278899999999999999999997
No 83
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=92.95 E-value=0.49 Score=43.93 Aligned_cols=37 Identities=19% Similarity=0.376 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
..||.|+|+|..|.++|..|... |.. ...+++++|++
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~ 40 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPS 40 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCC
Confidence 35899999999999999988754 421 01368888874
No 84
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=92.95 E-value=0.077 Score=52.19 Aligned_cols=98 Identities=16% Similarity=0.318 Sum_probs=61.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhh-----cCC--CCCHHH
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-----HAP--IKSLLD 403 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~-----~~~--~~~L~e 403 (464)
||.|+|||+.|.++|..+... |. ...++++|.+- ++ +......+.+. ... ..+ .+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~-----~~~V~l~D~~~----~~---~~~~~~~l~~~~~~~~~~~i~~~d-~~ 63 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GF-----AREMVLIDVDK----KR---AEGDALDLIHGTPFTRRANIYAGD-YA 63 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HH---HHHHHHHHHHHGGGSCCCEEEECC-GG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCCh----HH---HHHHHHHHHhhhhhcCCcEEEeCC-HH
Confidence 799999999999999988653 53 24799999851 11 11111111100 000 124 35
Q ss_pred HHhcCCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCC
Q 012398 404 AVKAIKPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPTS 448 (464)
Q Consensus 404 ~v~~vkptvLIG~S~~~g~--------------ft~evv~~Ma~~~erPIIFaLSNPt~ 448 (464)
+++. +|++|=+...+.. .-+++++.|.++++.-+|+-.|||..
T Consensus 64 ~~~~--aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 120 (319)
T 1a5z_A 64 DLKG--SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD 120 (319)
T ss_dssp GGTT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred HhCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHH
Confidence 6665 8988854443321 13789999998888888888999983
No 85
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=92.95 E-value=0.68 Score=45.77 Aligned_cols=122 Identities=17% Similarity=0.191 Sum_probs=71.5
Q ss_pred CCCceeecCcc---chhHHHHHHHHHHHHHh---------------------CCCCCcceEEEeCcchHHHHHHHHHHHH
Q 012398 296 SSHLVFNDDIQ---GTASVVLAGILSALKLV---------------------GGTLADQTFLFLGAGEAGTGIAELIALE 351 (464)
Q Consensus 296 ~~~~~FnDDiQ---GTaaV~LAgll~Alk~~---------------------g~~l~d~riv~~GAGsAg~GiA~ll~~a 351 (464)
..|++.|---- .+|=-+++.+|+..|-. |..|.+.+|.|+|+|..|..+|+.+..
T Consensus 98 ~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~- 176 (330)
T 2gcg_A 98 RGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKP- 176 (330)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCSHHHHHHHHHHGG-
T ss_pred CCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcCHHHHHHHHHHHH-
Confidence 46777775432 33444788888877621 356889999999999999999998753
Q ss_pred HHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCCCcEEEeccC----CCCCCCHHH
Q 012398 352 MSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEV 427 (464)
Q Consensus 352 ~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~ft~ev 427 (464)
.|+ +++.+|++.- + ....+ .+ . -...++.|+++. +|++|=.-. ..+.++++.
T Consensus 177 ----~G~-------~V~~~d~~~~----~---~~~~~-~~--g-~~~~~l~e~l~~--aDvVi~~vp~~~~t~~~i~~~~ 232 (330)
T 2gcg_A 177 ----FGV-------QRFLYTGRQP----R---PEEAA-EF--Q-AEFVSTPELAAQ--SDFIVVACSLTPATEGLCNKDF 232 (330)
T ss_dssp ----GTC-------CEEEEESSSC----C---HHHHH-TT--T-CEECCHHHHHHH--CSEEEECCCCCTTTTTCBSHHH
T ss_pred ----CCC-------EEEEECCCCc----c---hhHHH-hc--C-ceeCCHHHHHhh--CCEEEEeCCCChHHHHhhCHHH
Confidence 354 5888886421 1 10000 00 0 001257777765 676663321 124566666
Q ss_pred HHHHHcCCCCcEEEEcCC
Q 012398 428 VEAMASFNEKPVIFALSN 445 (464)
Q Consensus 428 v~~Ma~~~erPIIFaLSN 445 (464)
++.|. +..++.-.|.
T Consensus 233 ~~~mk---~gailIn~sr 247 (330)
T 2gcg_A 233 FQKMK---ETAVFINISR 247 (330)
T ss_dssp HHHSC---TTCEEEECSC
T ss_pred HhcCC---CCcEEEECCC
Confidence 66663 3445554443
No 86
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=92.77 E-value=1.7 Score=43.07 Aligned_cols=92 Identities=16% Similarity=0.211 Sum_probs=56.5
Q ss_pred CCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHH
Q 012398 324 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLD 403 (464)
Q Consensus 324 g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e 403 (464)
+..|.+.+|.|+|+|..|..+|+.+.. .|+ +++.+|+.. .. + .. ..+ .-...++.+
T Consensus 145 ~~~l~g~~vgIIG~G~iG~~iA~~l~~-----~G~-------~V~~~d~~~----~~-~---~~-~~~---g~~~~~l~~ 200 (334)
T 2dbq_A 145 GYDVYGKTIGIIGLGRIGQAIAKRAKG-----FNM-------RILYYSRTR----KE-E---VE-REL---NAEFKPLED 200 (334)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSC----CH-H---HH-HHH---CCEECCHHH
T ss_pred ccCCCCCEEEEEccCHHHHHHHHHHHh-----CCC-------EEEEECCCc----ch-h---hH-hhc---CcccCCHHH
Confidence 457889999999999999999998864 253 688888742 10 0 00 011 001136777
Q ss_pred HHhcCCCcEEEecc-C---CCCCCCHHHHHHHHcCCCCcEEEEcC
Q 012398 404 AVKAIKPTMLMGTS-G---VGKTFTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 404 ~v~~vkptvLIG~S-~---~~g~ft~evv~~Ma~~~erPIIFaLS 444 (464)
+++. +|++|=.- . ..+.++++.++.|. +..+|.-.|
T Consensus 201 ~l~~--aDvVil~vp~~~~t~~~i~~~~~~~mk---~~ailIn~s 240 (334)
T 2dbq_A 201 LLRE--SDFVVLAVPLTRETYHLINEERLKLMK---KTAILINIA 240 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTCEEEECS
T ss_pred HHhh--CCEEEECCCCChHHHHhhCHHHHhcCC---CCcEEEECC
Confidence 7776 77766332 1 12456667777774 455665555
No 87
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=92.65 E-value=0.083 Score=52.04 Aligned_cols=103 Identities=19% Similarity=0.248 Sum_probs=65.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCC---CCCHHHHHhc
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAP---IKSLLDAVKA 407 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~---~~~L~e~v~~ 407 (464)
||.|+|||..|.++|..|... |+ ...+.++|.+-=..++-.-++.+....|-.. .. ..+ .+++++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~-----~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~-~~i~~t~d-~~a~~~ 69 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHAAAGIDKY-PKIVGGAD-YSLLKG 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHHHHTTTCC-CEEEEESC-GGGGTT
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECChHHHHHHHHHHHhhhhhcCCC-CEEEEeCC-HHHhCC
Confidence 799999999999999887653 44 2479999975211110000121111112111 11 135 788887
Q ss_pred CCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 408 IKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 408 vkptvLIG~S~~~---g~-----------ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+|++|=+.+.+ |- +-+++++.|.+++++.+|+-.|||.
T Consensus 70 --aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPv 121 (294)
T 1oju_A 70 --SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp --CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred --CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcc
Confidence 99887444333 31 1257778899999999999999997
No 88
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.55 E-value=0.1 Score=49.66 Aligned_cols=103 Identities=15% Similarity=0.223 Sum_probs=61.5
Q ss_pred CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCC--C-----ccCCchhchh-----hhh
Q 012398 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSS--R-----KESLQHFKKP-----WAH 393 (464)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~--r-----~~~l~~~k~~-----fa~ 393 (464)
+|++.||+|+|+|..|..+|+.|+.+ |+ .+|.++|.+-+=..+ | .+++-..|.. +.+
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~ 96 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTR 96 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHH
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHH
Confidence 45678999999999999999999875 64 589999997421110 0 0011111111 111
Q ss_pred hcC---------CCC--CHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEc
Q 012398 394 EHA---------PIK--SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFAL 443 (464)
Q Consensus 394 ~~~---------~~~--~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaL 443 (464)
-.+ ... ++.+.++. +|++|.++.. .-+...+-..+.....|+|.+-
T Consensus 97 ~np~~~v~~~~~~~~~~~~~~~~~~--~DvVi~~~d~--~~~~~~l~~~~~~~~~p~i~~~ 153 (249)
T 1jw9_B 97 INPHIAITPVNALLDDAELAALIAE--HDLVLDCTDN--VAVRNQLNAGCFAAKVPLVSGA 153 (249)
T ss_dssp HCTTSEEEEECSCCCHHHHHHHHHT--SSEEEECCSS--HHHHHHHHHHHHHHTCCEEEEE
T ss_pred HCCCcEEEEEeccCCHhHHHHHHhC--CCEEEEeCCC--HHHHHHHHHHHHHcCCCEEEee
Confidence 001 111 35566765 8999987642 2355666666655668887753
No 89
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=92.54 E-value=0.17 Score=50.04 Aligned_cols=104 Identities=19% Similarity=0.276 Sum_probs=65.5
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchh-hhhhcCCCCCHHHHHhc
Q 012398 330 QTFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKP-WAHEHAPIKSLLDAVKA 407 (464)
Q Consensus 330 ~riv~~G-AGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~-fa~~~~~~~~L~e~v~~ 407 (464)
.||+|.| +|..|..++..|.. .|+ ...++++|.+.- .+...+|.+...+ -.+......++.+++++
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~-----~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPL-----VSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTT-----EEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCC
Confidence 5899999 79999999888753 343 246999996421 0000001110000 00000001267889997
Q ss_pred CCCcEEEeccCCC---C-----------CCCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 408 IKPTMLMGTSGVG---K-----------TFTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 408 vkptvLIG~S~~~---g-----------~ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+|++|=+.+.+ | ..++++++.|.+++.+.+|+--|||.
T Consensus 77 --aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv 128 (326)
T 1smk_A 77 --MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPV 128 (326)
T ss_dssp --CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred --CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCch
Confidence 99998555433 2 24778889999989899999999998
No 90
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=92.51 E-value=0.21 Score=48.73 Aligned_cols=107 Identities=19% Similarity=0.295 Sum_probs=64.5
Q ss_pred HHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh
Q 012398 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 393 (464)
Q Consensus 314 Agll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~ 393 (464)
.|++.+++-.|.+++..|++++|||-|+-+|+-.|.+ .|. ++|+++++. ..|...+. +.|..
T Consensus 110 ~Gf~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~~-----~g~------~~i~i~nRt----~~ra~~la---~~~~~ 171 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAE-----AGI------ASITLCDPS----TARMGAVC---ELLGN 171 (269)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC----HHHHHHHH---HHHHH
T ss_pred HHHHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHHH-----hCC------CeEEEeCCC----HHHHHHHH---HHHhc
Confidence 4677889888999999999999999999999877754 353 689999872 33322221 12221
Q ss_pred hcCC--CCCHHHHHhcCCCcEEEeccCCC-----C-CCCHHHHHHHHcCCCCcEEEEc
Q 012398 394 EHAP--IKSLLDAVKAIKPTMLMGTSGVG-----K-TFTKEVVEAMASFNEKPVIFAL 443 (464)
Q Consensus 394 ~~~~--~~~L~e~v~~vkptvLIG~S~~~-----g-~ft~evv~~Ma~~~erPIIFaL 443 (464)
..+. .....+.++. .|++|=++..+ . -+.++.+..+ .+..++|=+
T Consensus 172 ~~~~~~~~~~~~~~~~--~dliiNaTp~Gm~~~~~~p~~~~~~~~l---~~~~~v~D~ 224 (269)
T 3tum_A 172 GFPGLTVSTQFSGLED--FDLVANASPVGMGTRAELPLSAALLATL---QPDTLVADV 224 (269)
T ss_dssp HCTTCEEESCCSCSTT--CSEEEECSSTTCSTTCCCSSCHHHHHTC---CTTSEEEEC
T ss_pred cCCcceehhhhhhhhc--ccccccCCccccCCCCCCCCChHHHhcc---CCCcEEEEE
Confidence 1111 0111122333 78998766543 1 2455555443 356677755
No 91
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=92.49 E-value=0.069 Score=56.15 Aligned_cols=106 Identities=18% Similarity=0.283 Sum_probs=67.8
Q ss_pred cceEEEeCcchH-HHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhh-hh--cCC---CCCH
Q 012398 329 DQTFLFLGAGEA-GTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA-HE--HAP---IKSL 401 (464)
Q Consensus 329 d~riv~~GAGsA-g~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa-~~--~~~---~~~L 401 (464)
..||.|+|||+. +.++|..|+.. ..++. ...++|+|.+- ++.+.+......+. .. ... ..++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~---~~~l~----~~eV~L~Di~~----e~~~~~~~~~~~~l~~~~~~~~I~~t~D~ 96 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDH---LEEFP----IRKLKLYDNDK----ERQDRIAGACDVFIREKAPDIEFAATTDP 96 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHT---TTTSC----EEEEEEECSCH----HHHHHHHHHHHHHHHHHCTTSEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhC---CCCCC----CCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCCEEEEECCH
Confidence 469999999996 55566665431 01442 35799999853 22111112112221 11 111 2589
Q ss_pred HHHHhcCCCcEEEeccCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 402 LDAVKAIKPTMLMGTSGVGKT----------------------------------FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 402 ~e~v~~vkptvLIG~S~~~g~----------------------------------ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
.+++++ +|++|=+.+.++. +=+++++.|.++|+..+|+-.|||.
T Consensus 97 ~eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 97 EEAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCH
T ss_pred HHHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 999998 9999865554310 2368999999999999999999998
No 92
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=92.44 E-value=1.5 Score=45.45 Aligned_cols=178 Identities=19% Similarity=0.266 Sum_probs=110.7
Q ss_pred ChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCccHHH---HHHHHc---CCC-c---eeecCc----------cchhHH
Q 012398 252 TGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFE---LLSKYS---SSH-L---VFNDDI----------QGTASV 311 (464)
Q Consensus 252 ~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af~---iL~ryr---~~~-~---~FnDDi----------QGTaaV 311 (464)
+-+|-..|...|++++.+.-||..-|-=+|++.. ... +.+.|. ... + ++--+- .-||-=
T Consensus 115 s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~G 193 (419)
T 1gtm_A 115 SDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARG 193 (419)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhH
Confidence 4456677889999999998899888888999873 222 335553 221 2 332221 236666
Q ss_pred HHHHHHHHHHHhCCC-CCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEE-cccCcccCCCccCCchhch
Q 012398 312 VLAGILSALKLVGGT-LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLV-DSKGLIVSSRKESLQHFKK 389 (464)
Q Consensus 312 ~LAgll~Alk~~g~~-l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lv-D~~GLl~~~r~~~l~~~k~ 389 (464)
+.-++..+++..|.+ |++.+|.|+|.|..|..+|+++... .|+ +++.+ |+.|-+.....-++.+- .
T Consensus 194 v~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~----~G~-------kVv~~sD~~g~~~~~~gvdl~~L-~ 261 (419)
T 1gtm_A 194 ASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSED----FGM-------KVVAVSDSKGGIYNPDGLNADEV-L 261 (419)
T ss_dssp HHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEEECSSCEEEEEEEECHHHH-H
T ss_pred HHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHh----cCC-------EEEEEeCCCccccCccCCCHHHH-H
Confidence 666778888889999 9999999999999999999988641 253 45544 88775543211011111 1
Q ss_pred hhhhhc------CCCCCH-HHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 012398 390 PWAHEH------APIKSL-LDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 447 (464)
Q Consensus 390 ~fa~~~------~~~~~L-~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN-Pt 447 (464)
.++... ++...+ .+.+...|+|+||=++. ++.++++-++++ +.-+|..-+| |+
T Consensus 262 ~~~d~~~~l~~l~~t~~i~~~~l~~mk~dilIn~Ar-G~~Vde~a~~aL----~~~~I~~aAneP~ 322 (419)
T 1gtm_A 262 KWKNEHGSVKDFPGATNITNEELLELEVDVLAPAAI-EEVITKKNADNI----KAKIVAEVANGPV 322 (419)
T ss_dssp HHHHHHSSSTTCTTSEEECHHHHHHSCCSEEEECSC-SCCBCTTGGGGC----CCSEEECCSSSCB
T ss_pred HHHHhcCEeecCccCeeeCHHHHHhCCCCEEEECCC-cccCCHHHHHHh----cCCEEEEeeCCCC
Confidence 111110 000001 23456678999998875 569999887665 3445554555 54
No 93
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=92.41 E-value=0.19 Score=50.50 Aligned_cols=114 Identities=15% Similarity=0.153 Sum_probs=70.3
Q ss_pred HHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh
Q 012398 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 393 (464)
Q Consensus 314 Agll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~ 393 (464)
++.+++.... +....++.|+|+|..|-.++..+... .+ .++++++|+. .++ .....+.|..
T Consensus 116 ~s~laa~~la--~~~~~~v~iIGaG~~a~~~a~al~~~----~~------~~~V~V~~r~----~~~---a~~la~~~~~ 176 (350)
T 1x7d_A 116 TSLMAAQALA--RPNARKMALIGNGAQSEFQALAFHKH----LG------IEEIVAYDTD----PLA---TAKLIANLKE 176 (350)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSTTHHHHHHHHHHH----SC------CCEEEEECSS----HHH---HHHHHHHHTT
T ss_pred HHHHHHHHhc--cccCCeEEEECCcHHHHHHHHHHHHh----CC------CcEEEEEcCC----HHH---HHHHHHHHHh
Confidence 3455555553 34678999999999999988776543 23 3578888873 221 2222222221
Q ss_pred h----cCCCCCHHHHHhcCCCcEEEeccCCC---CCCCHHHHHHHHcCCCCcEEEEcCC--CCCCCCCCHH
Q 012398 394 E----HAPIKSLLDAVKAIKPTMLMGTSGVG---KTFTKEVVEAMASFNEKPVIFALSN--PTSQSECTAE 455 (464)
Q Consensus 394 ~----~~~~~~L~e~v~~vkptvLIG~S~~~---g~ft~evv~~Ma~~~erPIIFaLSN--Pt~~~E~tpe 455 (464)
. .....++.|+++. +|++|=++..+ ..|+.++++ +.-.|+.++. |. +-|+.++
T Consensus 177 ~~g~~~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~l~------~G~~V~~vgs~~p~-~~El~~~ 238 (350)
T 1x7d_A 177 YSGLTIRRASSVAEAVKG--VDIITTVTADKAYATIITPDMLE------PGMHLNAVGGDCPG-KTELHAD 238 (350)
T ss_dssp CTTCEEEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGGCC------TTCEEEECSCCBTT-BEEECHH
T ss_pred ccCceEEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHHcC------CCCEEEECCCCCCC-ceeeCHH
Confidence 0 1124689999986 99999766543 245544432 4458888875 55 6777764
No 94
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=92.25 E-value=0.061 Score=53.10 Aligned_cols=104 Identities=21% Similarity=0.311 Sum_probs=63.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCC-CCCHHHHHhcC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAP-IKSLLDAVKAI 408 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~-~~~L~e~v~~v 408 (464)
.||.|+|||+.|..+|-+|+. .++ ...|+++|.+-=-.++...+|.+. .+|.++..- ..+ .+++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~el~L~Di~~~k~~g~a~dl~~~-~~~~~~~~v~~~~-~~a~~~- 67 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALAL-----LGV-----AREVVLVDLDRKLAQAHAEDILHA-TPFAHPVWVWAGS-YGDLEG- 67 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHHTT-GGGSCCCEEEECC-GGGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCChhHHHHHHHHHHHh-HhhcCCeEEEECC-HHHhCC-
Confidence 389999999999998887654 243 258999998520000000012111 122211000 123 677887
Q ss_pred CCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 409 KPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 409 kptvLIG~S~~~---g~-----------ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+|++|=+.+.+ |- +-+++++.|.+++.+.+|+-.|||.
T Consensus 68 -aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (310)
T 2xxj_A 68 -ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPV 119 (310)
T ss_dssp -EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred -CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 99998444433 31 2356778888889999999999997
No 95
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=92.25 E-value=0.2 Score=51.82 Aligned_cols=104 Identities=13% Similarity=0.208 Sum_probs=66.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHH-hcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCC---CCCHHHHH
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSK-QTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAP---IKSLLDAV 405 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~-~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~---~~~L~e~v 405 (464)
.||.|+|||+. ++..++..+.. ..++. ...|+|+|.+- +|.+........+.+.... ..++.+++
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v~~t~d~~~al 71 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKVLISDTFEGAV 71 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEEEECSSHHHHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEEEEeCCHHHHh
Confidence 58999999995 55555444433 23442 46799999752 2211011111111111111 25788999
Q ss_pred hcCCCcEEEeccCCCC---------------CC-------------------CHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 406 KAIKPTMLMGTSGVGK---------------TF-------------------TKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 406 ~~vkptvLIG~S~~~g---------------~f-------------------t~evv~~Ma~~~erPIIFaLSNPt 447 (464)
++ +|++|=..++++ .+ =.++++.|.++| ..+|+-.|||.
T Consensus 72 ~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPv 144 (417)
T 1up7_A 72 VD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPS 144 (417)
T ss_dssp TT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSH
T ss_pred CC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChH
Confidence 98 999997776653 21 358999999999 99999999998
No 96
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=92.12 E-value=1.4 Score=42.04 Aligned_cols=120 Identities=18% Similarity=0.180 Sum_probs=73.7
Q ss_pred eeecCCCccHHHHHHHHcC------CCceeecCccchhHHHHHHHHHHHHHh-CCCCCcceEEEeC-cchHHHHHHHHHH
Q 012398 278 QFEDFANHNAFELLSKYSS------SHLVFNDDIQGTASVVLAGILSALKLV-GGTLADQTFLFLG-AGEAGTGIAELIA 349 (464)
Q Consensus 278 q~EDf~~~~af~iL~ryr~------~~~~FnDDiQGTaaV~LAgll~Alk~~-g~~l~d~riv~~G-AGsAg~GiA~ll~ 349 (464)
.++-+.-..+.+++++-+. +..+| .|..|.- ..-.|++.+++-. +.++++.+++|.| +|.+|.++|..+.
T Consensus 63 ~~~G~~~~~~~~~~~~~~~~~~gavnt~~~-~~~~G~n-Td~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~ 140 (287)
T 1lu9_A 63 FVGGGDMAAGERVFEAVKKRFFGPFRVSCM-LDSNGSN-TTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLA 140 (287)
T ss_dssp EEECSCHHHHHHHHHHHHHHCBTTBCCEEE-ECSTTHH-HHHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHH
T ss_pred EEccchHHHHHHHHHHHHHhcCCCeEEEEe-cCCCcCC-chHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHH
Confidence 3454555577778877652 23344 4455532 3456777888776 7889999999999 8999999998886
Q ss_pred HHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhh-c-----CCCC---CHHHHHhcCCCcEEEeccCCC
Q 012398 350 LEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-H-----APIK---SLLDAVKAIKPTMLMGTSGVG 420 (464)
Q Consensus 350 ~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~-~-----~~~~---~L~e~v~~vkptvLIG~S~~~ 420 (464)
+ .|. +++++|++ ..+ .....+.+... . -+.. ++.++++. .|++|=.++.+
T Consensus 141 ~-----~G~-------~V~i~~R~----~~~---~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~DvlVn~ag~g 199 (287)
T 1lu9_A 141 G-----EGA-------EVVLCGRK----LDK---AQAAADSVNKRFKVNVTAAETADDASRAEAVKG--AHFVFTAGAIG 199 (287)
T ss_dssp H-----TTC-------EEEEEESS----HHH---HHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTT--CSEEEECCCTT
T ss_pred H-----CcC-------EEEEEECC----HHH---HHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHh--CCEEEECCCcc
Confidence 5 352 48888874 111 11111111110 0 0122 35666765 79999887654
No 97
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.08 E-value=0.12 Score=50.67 Aligned_cols=103 Identities=19% Similarity=0.268 Sum_probs=62.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCC---CCCHHHHHh
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAP---IKSLLDAVK 406 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~---~~~L~e~v~ 406 (464)
.||.|+|||..|.++|..+.. .|+ . .++++|.+-=-.++...++.+.. .+...... ..++ ++++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~--~v~L~Di~~~~~~g~~~dl~~~~-~~~~~~~~i~~t~d~-~a~~ 69 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G--DIVLLDIVEGVPQGKALDLYEAS-PIEGFDVRVTGTNNY-ADTA 69 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S--EEEEECSSSSHHHHHHHHHHTTH-HHHTCCCCEEEESCG-GGGT
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C--eEEEEeCCccHHHHHHHhHHHhH-hhcCCCeEEEECCCH-HHHC
Confidence 489999999999999997754 353 1 39999975100000000111111 01111111 1466 7788
Q ss_pred cCCCcEEEeccCCC---C-----------CCCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 407 AIKPTMLMGTSGVG---K-----------TFTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 407 ~vkptvLIG~S~~~---g-----------~ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+ +|++|=+.+.+ | .+.+++.+.+.+++++-+|+-.|||.
T Consensus 70 ~--aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv 122 (309)
T 1ur5_A 70 N--SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL 122 (309)
T ss_dssp T--CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSH
T ss_pred C--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCch
Confidence 7 99998555443 2 12357888888999898888889997
No 98
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=92.02 E-value=1.3 Score=44.73 Aligned_cols=121 Identities=16% Similarity=0.177 Sum_probs=78.5
Q ss_pred CCCceeecCc---cchhHHHHHHHHHHHHH---------------------hCCCCCcceEEEeCcchHHHHHHHHHHHH
Q 012398 296 SSHLVFNDDI---QGTASVVLAGILSALKL---------------------VGGTLADQTFLFLGAGEAGTGIAELIALE 351 (464)
Q Consensus 296 ~~~~~FnDDi---QGTaaV~LAgll~Alk~---------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~a 351 (464)
..|++.|--- +.+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|-.+|+.+..
T Consensus 116 ~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~- 194 (345)
T 4g2n_A 116 LGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARG- 194 (345)
T ss_dssp TTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHT-
T ss_pred CCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHH-
Confidence 3566666432 23555678888877763 2567899999999999999999998864
Q ss_pred HHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCCCcEEEeccC----CCCCCCHHH
Q 012398 352 MSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEV 427 (464)
Q Consensus 352 ~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~ft~ev 427 (464)
.|+ +++.+|+... +.. .+.......+|.|+++. .|+++=.-- ..+.|+++.
T Consensus 195 ----~G~-------~V~~~dr~~~---------~~~---~~~g~~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~~~~ 249 (345)
T 4g2n_A 195 ----FGL-------AIHYHNRTRL---------SHA---LEEGAIYHDTLDSLLGA--SDIFLIAAPGRPELKGFLDHDR 249 (345)
T ss_dssp ----TTC-------EEEEECSSCC---------CHH---HHTTCEECSSHHHHHHT--CSEEEECSCCCGGGTTCBCHHH
T ss_pred ----CCC-------EEEEECCCCc---------chh---hhcCCeEeCCHHHHHhh--CCEEEEecCCCHHHHHHhCHHH
Confidence 254 6888887531 000 00111112478888886 888774321 125788888
Q ss_pred HHHHHcCCCCcEEEEcCC
Q 012398 428 VEAMASFNEKPVIFALSN 445 (464)
Q Consensus 428 v~~Ma~~~erPIIFaLSN 445 (464)
++.|. +..|+.=.|.
T Consensus 250 l~~mk---~gailIN~aR 264 (345)
T 4g2n_A 250 IAKIP---EGAVVINISR 264 (345)
T ss_dssp HHHSC---TTEEEEECSC
T ss_pred HhhCC---CCcEEEECCC
Confidence 88885 5667766554
No 99
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.94 E-value=0.14 Score=51.22 Aligned_cols=106 Identities=17% Similarity=0.304 Sum_probs=65.3
Q ss_pred CCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCC---CCHHH
Q 012398 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI---KSLLD 403 (464)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~---~~L~e 403 (464)
.+..||.|+|||..|.++|..|.. .|+ + .+.++|.+-=...+-..+|.+. ..|......+ .+. +
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~-----~~~----~--~v~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~t~d~-~ 71 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGL-----KEL----G--DVVLFDIAEGTPQGKGLDIAES-SPVDGFDAKFTGANDY-A 71 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHHH-HHHHTCCCCEEEESSG-G
T ss_pred CcCCEEEEECCCHHHHHHHHHHHh-----CCC----C--eEEEEeCCchhHHHHHHHHhch-hhhcCCCCEEEEeCCH-H
Confidence 456799999999999999988865 365 2 5999998521111000012111 1122111111 344 7
Q ss_pred HHhcCCCcEEEeccCC---CCC-----C------CHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 404 AVKAIKPTMLMGTSGV---GKT-----F------TKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 404 ~v~~vkptvLIG~S~~---~g~-----f------t~evv~~Ma~~~erPIIFaLSNPt 447 (464)
++++ +|++|=+.+. +|- | -+++++.|.+++++.+|+-.|||.
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPv 127 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPL 127 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCc
Confidence 8887 9988744433 331 1 267788888999999999999997
No 100
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=91.89 E-value=0.47 Score=45.49 Aligned_cols=100 Identities=11% Similarity=0.113 Sum_probs=57.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc--cCcccCC-CccCCch-hchhhhhhcCCCC--CHHHH
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS--KGLIVSS-RKESLQH-FKKPWAHEHAPIK--SLLDA 404 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~--~GLl~~~-r~~~l~~-~k~~fa~~~~~~~--~L~e~ 404 (464)
||.|+|+|..|..+|..|..+ | .+++++|+ +.--... +...... +...+ ....... ++.|+
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~ 68 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTEILKSISAGREHPRLGVKL-NGVEIFWPEQLEKC 68 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHHHHHHHHTTCCBTTTTBCC-CSEEEECGGGHHHH
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHHHHHHHHHhCcCcccCccc-cceEEecHHhHHHH
Confidence 799999999999999988753 4 36888887 3110000 0000000 00000 0000113 67788
Q ss_pred HhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 405 VKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 405 v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
++. +|++| ++..+ ...+++++.++...+..+|..++|-.
T Consensus 69 ~~~--~D~vi-~~v~~-~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 69 LEN--AEVVL-LGVST-DGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp HTT--CSEEE-ECSCG-GGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred Hhc--CCEEE-EcCCh-HHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 875 88877 33333 36788888876533456777888765
No 101
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=91.89 E-value=1.1 Score=43.93 Aligned_cols=108 Identities=18% Similarity=0.219 Sum_probs=70.0
Q ss_pred hhHHHHHHHHHHHHH------------------hCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEE
Q 012398 308 TASVVLAGILSALKL------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWL 369 (464)
Q Consensus 308 TaaV~LAgll~Alk~------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~l 369 (464)
+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~-----~G~-------~V~~ 170 (307)
T 1wwk_A 103 VAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANA-----LGM-------NILL 170 (307)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEE
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHH-----CCC-------EEEE
Confidence 444467777777662 3467999999999999999999998864 354 6888
Q ss_pred EcccCcccCCCccCCchhchhhhhh-cCCCCCHHHHHhcCCCcEEEeccC----CCCCCCHHHHHHHHcCCCCcEEEEcC
Q 012398 370 VDSKGLIVSSRKESLQHFKKPWAHE-HAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 370 vD~~GLl~~~r~~~l~~~k~~fa~~-~~~~~~L~e~v~~vkptvLIG~S~----~~g~ft~evv~~Ma~~~erPIIFaLS 444 (464)
+|+.. .. . .+.. .-...+|.|+++. .|+++=.-- ..+.++++.++.|. +..++.=.|
T Consensus 171 ~d~~~----~~-----~----~~~~~g~~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~mk---~ga~lin~a 232 (307)
T 1wwk_A 171 YDPYP----NE-----E----RAKEVNGKFVDLETLLKE--SDVVTIHVPLVESTYHLINEERLKLMK---KTAILINTS 232 (307)
T ss_dssp ECSSC----CH-----H----HHHHTTCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHHHSC---TTCEEEECS
T ss_pred ECCCC----Ch-----h----hHhhcCccccCHHHHHhh--CCEEEEecCCChHHhhhcCHHHHhcCC---CCeEEEECC
Confidence 88741 10 0 1111 0011368888876 888774321 23567788888885 456776666
Q ss_pred C
Q 012398 445 N 445 (464)
Q Consensus 445 N 445 (464)
.
T Consensus 233 r 233 (307)
T 1wwk_A 233 R 233 (307)
T ss_dssp C
T ss_pred C
Confidence 5
No 102
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=91.86 E-value=0.3 Score=46.79 Aligned_cols=108 Identities=18% Similarity=0.304 Sum_probs=68.2
Q ss_pred HHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhh
Q 012398 313 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA 392 (464)
Q Consensus 313 LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa 392 (464)
..|++.+++-.|..++..+++|+|+|.+|.++|..|... | . +++++|++ .++ .....+.|.
T Consensus 113 ~~G~~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~~-----g------~-~V~v~~r~----~~~---~~~l~~~~g 173 (275)
T 2hk9_A 113 WIGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKE-----G------A-KVFLWNRT----KEK---AIKLAQKFP 173 (275)
T ss_dssp HHHHHHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHHH-----T------C-EEEEECSS----HHH---HHHHTTTSC
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHc-----C------C-EEEEEECC----HHH---HHHHHHHcC
Confidence 348888888888899999999999999999999988653 4 2 68888874 111 111111110
Q ss_pred hhcCCCCCHHHHHhcCCCcEEEeccCCCCCCC--HHHHHHHHcCCCCcEEEEcCC
Q 012398 393 HEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFT--KEVVEAMASFNEKPVIFALSN 445 (464)
Q Consensus 393 ~~~~~~~~L~e~v~~vkptvLIG~S~~~g~ft--~evv~~Ma~~~erPIIFaLSN 445 (464)
.....++.++++. +|++|-+...+ ... ++.+. .....+..+|+-++.
T Consensus 174 --~~~~~~~~~~~~~--aDiVi~atp~~-~~~~~~~~i~-~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 174 --LEVVNSPEEVIDK--VQVIVNTTSVG-LKDEDPEIFN-YDLIKKDHVVVDIIY 222 (275)
T ss_dssp --EEECSCGGGTGGG--CSEEEECSSTT-SSTTCCCSSC-GGGCCTTSEEEESSS
T ss_pred --CeeehhHHhhhcC--CCEEEEeCCCC-CCCCCCCCCC-HHHcCCCCEEEEcCC
Confidence 0111267787875 99999766544 221 11221 112235678888887
No 103
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.83 E-value=0.075 Score=44.05 Aligned_cols=101 Identities=12% Similarity=0.166 Sum_probs=52.6
Q ss_pred CCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCC---HHH
Q 012398 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKS---LLD 403 (464)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~---L~e 403 (464)
++..+|+|+|+|..|..+|+.+.. .|. +++++|++. ++.+.+......+.. .+..+ |.+
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~-----~g~-------~v~~~d~~~----~~~~~~~~~~~~~~~--~d~~~~~~l~~ 65 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHR-----MGH-------EVLAVDINE----EKVNAYASYATHAVI--ANATEENELLS 65 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHH-----TTC-------CCEEEESCH----HHHHTTTTTCSEEEE--CCTTCHHHHHT
T ss_pred CcCCcEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----HHHHHHHHhCCEEEE--eCCCCHHHHHh
Confidence 456789999999999999988864 242 477888742 111111111001111 11122 333
Q ss_pred H-HhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 404 A-VKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 404 ~-v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+ ++ ++|++|-+.+..-..+..+++...+.+...||...+||.
T Consensus 66 ~~~~--~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~ 108 (144)
T 2hmt_A 66 LGIR--NFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYY 108 (144)
T ss_dssp TTGG--GCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHH
T ss_pred cCCC--CCCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 2 33 489999665532012233444344445556777677665
No 104
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=91.73 E-value=0.099 Score=52.03 Aligned_cols=104 Identities=18% Similarity=0.270 Sum_probs=64.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCC--CCHHHHHhcC
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI--KSLLDAVKAI 408 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~--~~L~e~v~~v 408 (464)
||.|+|||..|.++|..|+.. |+ ...+.++|.+-=..++-.-+|.+. ..+......+ .+..+++++
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~~v~~~~~~~a~~~- 69 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DV-----AKEVVMVDIKDGMPQGKALDMRES-SPIHGFDTRVTGTNDYGPTED- 69 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----SSEEEEECSSTTHHHHHHHHHHHH-HHHHTCCCEEEEESSSGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCchHHHHHHHHHHhcc-ccccCCCcEEEECCCHHHhCC-
Confidence 799999999999999988763 54 247999998531111100012111 1121111111 245678887
Q ss_pred CCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 409 KPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 409 kptvLIG~S~~~---g~-----------ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+|++|=+.+.+ |- +-+++++.+++++++.+|+-.|||.
T Consensus 70 -aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 121 (314)
T 3nep_X 70 -SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPL 121 (314)
T ss_dssp -CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSH
T ss_pred -CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCch
Confidence 99887444333 31 2367788889999999999999997
No 105
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.68 E-value=0.32 Score=46.52 Aligned_cols=49 Identities=20% Similarity=0.256 Sum_probs=40.0
Q ss_pred HHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 313 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 313 LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
-.|++.+|+-.|.++++.+++|+|||.+|.++|..+.. .| .+++++|++
T Consensus 103 ~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~-----~G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLS-----LD-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHH-----cC-------CEEEEEECC
Confidence 56788888888889999999999999888888888765 24 368888874
No 106
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.67 E-value=0.19 Score=50.64 Aligned_cols=95 Identities=20% Similarity=0.294 Sum_probs=62.3
Q ss_pred CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhh----cCCCCCH
Q 012398 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE----HAPIKSL 401 (464)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~----~~~~~~L 401 (464)
.+...+|+|+|+|..|..+|+.+.. .|. +++.+|++. .+ +...++.+... .....++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~-----~Ga-------~V~~~d~~~----~~---l~~~~~~~g~~~~~~~~~~~~l 225 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANG-----MGA-------TVTVLDINI----DK---LRQLDAEFCGRIHTRYSSAYEL 225 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSSEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeCCH----HH---HHHHHHhcCCeeEeccCCHHHH
Confidence 4788999999999999999998864 352 688888741 11 11111111110 0011357
Q ss_pred HHHHhcCCCcEEEeccCCC-----CCCCHHHHHHHHcCCCCcEEEEcC
Q 012398 402 LDAVKAIKPTMLMGTSGVG-----KTFTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 402 ~e~v~~vkptvLIG~S~~~-----g~ft~evv~~Ma~~~erPIIFaLS 444 (464)
.+.++. +|++|.+...+ ..++++.++.|. +.-+|.-+|
T Consensus 226 ~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk---~g~~iV~va 268 (377)
T 2vhw_A 226 EGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK---PGAVLVDIA 268 (377)
T ss_dssp HHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC---TTCEEEEGG
T ss_pred HHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC---CCcEEEEEe
Confidence 788876 99999876544 357999999996 455666676
No 107
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=91.56 E-value=0.15 Score=48.68 Aligned_cols=103 Identities=23% Similarity=0.306 Sum_probs=63.3
Q ss_pred CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccC--CCc-----cCCchhchh-----hhh
Q 012398 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVS--SRK-----ESLQHFKKP-----WAH 393 (464)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~--~r~-----~~l~~~k~~-----fa~ 393 (464)
+|++.||+|+|+|..|..+|+.|+.+ |+ ++|.++|.+=+=.. .|. +++-..|.. +.+
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~ 93 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQ 93 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHH
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHH
Confidence 56788999999999999999999764 64 68999998632111 110 011111111 111
Q ss_pred hcCC---------C--CCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEc
Q 012398 394 EHAP---------I--KSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFAL 443 (464)
Q Consensus 394 ~~~~---------~--~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaL 443 (464)
-.+. . .++.+.++. .|++|.++.- .-++..+...+.....|+|.+-
T Consensus 94 ~np~~~v~~~~~~~~~~~~~~~~~~--~DvVi~~~d~--~~~r~~l~~~~~~~~~p~i~~~ 150 (251)
T 1zud_1 94 LNPDIQLTALQQRLTGEALKDAVAR--ADVVLDCTDN--MATRQEINAACVALNTPLITAS 150 (251)
T ss_dssp HCTTSEEEEECSCCCHHHHHHHHHH--CSEEEECCSS--HHHHHHHHHHHHHTTCCEEEEE
T ss_pred HCCCCEEEEEeccCCHHHHHHHHhc--CCEEEECCCC--HHHHHHHHHHHHHhCCCEEEEe
Confidence 0011 1 145667775 8999977642 2356677777766788988753
No 108
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.56 E-value=0.11 Score=50.25 Aligned_cols=103 Identities=18% Similarity=0.288 Sum_probs=61.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCc-hhchhhhhhcCCC---CCHHHH
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ-HFKKPWAHEHAPI---KSLLDA 404 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~-~~k~~fa~~~~~~---~~L~e~ 404 (464)
..||+|+|||+.|..+|..|.. .|. ...++++|++---... ..+. .+..++... ... .+ .++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~-----~g~-----~~~V~l~d~~~~~~~~--~~~~~~~~~~~~~~-~~v~~~~~-~~~ 72 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQ-----RGI-----AREIVLEDIAKERVEA--EVLDMQHGSSFYPT-VSIDGSDD-PEI 72 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHH--HHHHHHHTGGGSTT-CEEEEESC-GGG
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCChhHHHH--HHHHHHhhhhhcCC-eEEEeCCC-HHH
Confidence 3689999999999999988864 253 1379999986310000 0010 011111111 001 13 355
Q ss_pred HhcCCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 405 VKAIKPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 405 v~~vkptvLIG~S~~~g~--------------ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
++. +|++|=+...+.. +-+++++.|++++++.+|+.++||.
T Consensus 73 ~~~--aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~ 127 (319)
T 1lld_A 73 CRD--ADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPV 127 (319)
T ss_dssp GTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred hCC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCch
Confidence 665 8988854433311 1128899998877888999999997
No 109
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=91.53 E-value=0.12 Score=51.45 Aligned_cols=106 Identities=17% Similarity=0.252 Sum_probs=65.4
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCC--CCHHHHH
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI--KSLLDAV 405 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~--~~L~e~v 405 (464)
+..||.|+|||..|.++|..|.. .|+ + .+.++|.+-=...+-..+|.+. ..+......+ .+-.+++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~-----~~~----~--~v~l~Di~~~~~~g~a~dL~~~-~~~~~~~~~v~~t~d~~a~ 71 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALI-----KQL----G--DVVLFDIAQGMPNGKALDLLQT-CPIEGVDFKVRGTNDYKDL 71 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHTT-HHHHTCCCCEEEESCGGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-----CCC----c--eEEEEeCChHHHHHHHHHHHhh-hhhcCCCcEEEEcCCHHHH
Confidence 35799999999999999988765 355 2 6999998521110000012111 1111111111 1224788
Q ss_pred hcCCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 406 KAIKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 406 ~~vkptvLIG~S~~~---g~-----------ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
++ +|++|=+.+.+ |- +-+++++.+.++++..+|+-.|||.
T Consensus 72 ~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 125 (321)
T 3p7m_A 72 EN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPL 125 (321)
T ss_dssp TT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred CC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 87 99888554433 31 2367788888999999999999997
No 110
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=91.39 E-value=0.7 Score=45.61 Aligned_cols=112 Identities=20% Similarity=0.184 Sum_probs=68.4
Q ss_pred HHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh
Q 012398 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 393 (464)
Q Consensus 314 Agll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~ 393 (464)
++.+++..+.. ....++.|+|+|..|-.+++.+... .+ .++++++|+. .++ .....+.|..
T Consensus 112 ~s~laa~~la~--~~~~~v~iIGaG~~a~~~~~al~~~----~~------~~~V~v~~r~----~~~---a~~la~~~~~ 172 (322)
T 1omo_A 112 AGGIAAKYLAR--KNSSVFGFIGCGTQAYFQLEALRRV----FD------IGEVKAYDVR----EKA---AKKFVSYCED 172 (322)
T ss_dssp HHHHHHHHHSC--TTCCEEEEECCSHHHHHHHHHHHHH----SC------CCEEEEECSS----HHH---HHHHHHHHHH
T ss_pred HHHHHHHhccC--CCCCEEEEEcCcHHHHHHHHHHHHh----CC------ccEEEEECCC----HHH---HHHHHHHHHh
Confidence 34455555432 3567999999999999988877653 23 3678888873 222 2222222221
Q ss_pred h---cCCCCCHHHHHhcCCCcEEEeccCCC-CCCCHHHHHHHHcCCCCcEEEEcC--CCCCCCCCCHH
Q 012398 394 E---HAPIKSLLDAVKAIKPTMLMGTSGVG-KTFTKEVVEAMASFNEKPVIFALS--NPTSQSECTAE 455 (464)
Q Consensus 394 ~---~~~~~~L~e~v~~vkptvLIG~S~~~-g~ft~evv~~Ma~~~erPIIFaLS--NPt~~~E~tpe 455 (464)
. .. ..++.|++ . +|++|-++..+ ..|+.+++ .+.-.|+.++ +|. +.|+.++
T Consensus 173 ~~~~~~-~~~~~e~v-~--aDvVi~aTp~~~pv~~~~~l------~~G~~V~~ig~~~p~-~~el~~~ 229 (322)
T 1omo_A 173 RGISAS-VQPAEEAS-R--CDVLVTTTPSRKPVVKAEWV------EEGTHINAIGADGPG-KQELDVE 229 (322)
T ss_dssp TTCCEE-ECCHHHHT-S--SSEEEECCCCSSCCBCGGGC------CTTCEEEECSCCSTT-CCCBCHH
T ss_pred cCceEE-ECCHHHHh-C--CCEEEEeeCCCCceecHHHc------CCCeEEEECCCCCCC-ccccCHH
Confidence 1 12 46899999 5 99998665432 24554433 2566899883 455 6788764
No 111
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.38 E-value=0.24 Score=47.45 Aligned_cols=49 Identities=24% Similarity=0.343 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 313 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 313 LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
-.|++.+|+-.|..++..+++|+|||.+|.++|..|... | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~-----G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQA-----Q-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHT-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 567888888888889999999999999999998887652 4 478888874
No 112
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=91.37 E-value=0.14 Score=47.88 Aligned_cols=38 Identities=16% Similarity=0.334 Sum_probs=28.2
Q ss_pred CCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.++...||.|+|+|..|..+|..+... |. +.++++|++
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~ 43 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRT 43 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSS
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCC
Confidence 345567999999999999999988653 53 237777763
No 113
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=91.18 E-value=0.19 Score=42.87 Aligned_cols=31 Identities=23% Similarity=0.417 Sum_probs=25.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.|+|+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~-----~G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 59999999999999998875 476 47888864
No 114
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=91.14 E-value=1.3 Score=44.51 Aligned_cols=107 Identities=14% Similarity=0.238 Sum_probs=69.6
Q ss_pred hhHHHHHHHHHHHHH--------------------hCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeE
Q 012398 308 TASVVLAGILSALKL--------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKI 367 (464)
Q Consensus 308 TaaV~LAgll~Alk~--------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i 367 (464)
+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+.. .|+ ++
T Consensus 130 vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~-----~G~-------~V 197 (340)
T 4dgs_A 130 VADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEA-----FGM-------SV 197 (340)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EE
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHH-----CCC-------EE
Confidence 455567777777652 2467899999999999999999998863 354 58
Q ss_pred EEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCCCcEEEeccC----CCCCCCHHHHHHHHcCCCCcEEEEc
Q 012398 368 WLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVEAMASFNEKPVIFAL 443 (464)
Q Consensus 368 ~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~ft~evv~~Ma~~~erPIIFaL 443 (464)
+.+|+.. .. . . .+ ....+|.|+++. .|+++=.-- ..+.++++.++.|. +..++.=.
T Consensus 198 ~~~dr~~----~~-~-~-----~~----~~~~sl~ell~~--aDvVil~vP~t~~t~~li~~~~l~~mk---~gailIN~ 257 (340)
T 4dgs_A 198 RYWNRST----LS-G-V-----DW----IAHQSPVDLARD--SDVLAVCVAASAATQNIVDASLLQALG---PEGIVVNV 257 (340)
T ss_dssp EEECSSC----CT-T-S-----CC----EECSSHHHHHHT--CSEEEECC----------CHHHHHHTT---TTCEEEEC
T ss_pred EEEcCCc----cc-c-c-----Cc----eecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhHHHHhcCC---CCCEEEEC
Confidence 8888742 11 0 0 01 113579999887 888874321 23578888888885 56677766
Q ss_pred CCC
Q 012398 444 SNP 446 (464)
Q Consensus 444 SNP 446 (464)
|.-
T Consensus 258 aRG 260 (340)
T 4dgs_A 258 ARG 260 (340)
T ss_dssp SCC
T ss_pred CCC
Confidence 653
No 115
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=91.01 E-value=1.2 Score=44.49 Aligned_cols=90 Identities=14% Similarity=0.232 Sum_probs=58.3
Q ss_pred CCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHH
Q 012398 324 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLD 403 (464)
Q Consensus 324 g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e 403 (464)
+..|.+.+|.|+|+|..|.++|+.+.. .|+ +++.+|+..- . ... + ....+|.|
T Consensus 159 ~~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~dr~~~----~---~~g----~----~~~~~l~e 211 (333)
T 3ba1_A 159 TTKFSGKRVGIIGLGRIGLAVAERAEA-----FDC-------PISYFSRSKK----P---NTN----Y----TYYGSVVE 211 (333)
T ss_dssp CCCCTTCCEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSCC----T---TCC----S----EEESCHHH
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEECCCch----h---ccC----c----eecCCHHH
Confidence 467899999999999999999998864 354 5888887421 1 110 0 01246777
Q ss_pred HHhcCCCcEEEeccC----CCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 012398 404 AVKAIKPTMLMGTSG----VGKTFTKEVVEAMASFNEKPVIFALSN 445 (464)
Q Consensus 404 ~v~~vkptvLIG~S~----~~g~ft~evv~~Ma~~~erPIIFaLSN 445 (464)
+++. +|++|=.-- ..+.++++.++.|. +..+|.-.|.
T Consensus 212 ll~~--aDvVil~vP~~~~t~~li~~~~l~~mk---~gailIn~sr 252 (333)
T 3ba1_A 212 LASN--SDILVVACPLTPETTHIINREVIDALG---PKGVLINIGR 252 (333)
T ss_dssp HHHT--CSEEEECSCCCGGGTTCBCHHHHHHHC---TTCEEEECSC
T ss_pred HHhc--CCEEEEecCCChHHHHHhhHHHHhcCC---CCCEEEECCC
Confidence 7775 787763321 12467777777774 4556665554
No 116
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=90.91 E-value=0.29 Score=47.76 Aligned_cols=98 Identities=16% Similarity=0.275 Sum_probs=57.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhch-hhhh----hcCCCCCHHH
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK-PWAH----EHAPIKSLLD 403 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~-~fa~----~~~~~~~L~e 403 (464)
..||.|+|+|+.|.++|..|..+ | .+++++|+.. .+.+.+..... .|-. ......++.|
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~----~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 77 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRK----EIVDLINVSHTSPYVEESKITVRATNDLEE 77 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSH----HHHHHHHHHSCBTTBTTCCCCSEEESCGGG
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCH----HHHHHHHHhCCcccCCCCeeeEEEeCCHHH
Confidence 57999999999999999998753 4 3688888741 11011111000 0000 0001135666
Q ss_pred HHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCC
Q 012398 404 AVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQ 449 (464)
Q Consensus 404 ~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSNPt~~ 449 (464)
++. +|++| ++..+ ...+++++.++. +..+|..++|..+.
T Consensus 78 -~~~--aDvVi-l~vk~-~~~~~v~~~l~~--~~~~vv~~~nGi~~ 116 (335)
T 1z82_A 78 -IKK--EDILV-IAIPV-QYIREHLLRLPV--KPSMVLNLSKGIEI 116 (335)
T ss_dssp -CCT--TEEEE-ECSCG-GGHHHHHTTCSS--CCSEEEECCCCCCT
T ss_pred -hcC--CCEEE-EECCH-HHHHHHHHHhCc--CCCEEEEEeCCCCC
Confidence 654 78666 33333 567788877654 55677789987654
No 117
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=90.87 E-value=1.4 Score=43.65 Aligned_cols=110 Identities=15% Similarity=0.170 Sum_probs=71.2
Q ss_pred HHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhh--
Q 012398 317 LSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-- 394 (464)
Q Consensus 317 l~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~-- 394 (464)
+++-.+..+ ...++.|+|+|..|-.+++.+... .+ .++|+++|+. +...+ .+.+...
T Consensus 111 laa~~La~~--~~~~v~iIGaG~~a~~~~~al~~~----~~------~~~V~v~~r~------~a~~l---a~~l~~~~g 169 (313)
T 3hdj_A 111 LAAGALARP--RSSVLGLFGAGTQGAEHAAQLSAR----FA------LEAILVHDPY------ASPEI---LERIGRRCG 169 (313)
T ss_dssp HHHHHHSCT--TCCEEEEECCSHHHHHHHHHHHHH----SC------CCEEEEECTT------CCHHH---HHHHHHHHT
T ss_pred HHHHhhccC--CCcEEEEECccHHHHHHHHHHHHh----CC------CcEEEEECCc------HHHHH---HHHHHHhcC
Confidence 344444332 467999999999999888877653 22 3689999986 21112 2222211
Q ss_pred --cCCCCCHHHHHhcCCCcEEEeccCCC-CCCCHHHHHHHHcCCCCcEEEEcCC--CCCCCCCCHHHH
Q 012398 395 --HAPIKSLLDAVKAIKPTMLMGTSGVG-KTFTKEVVEAMASFNEKPVIFALSN--PTSQSECTAEEA 457 (464)
Q Consensus 395 --~~~~~~L~e~v~~vkptvLIG~S~~~-g~ft~evv~~Ma~~~erPIIFaLSN--Pt~~~E~tpedA 457 (464)
.... ++.|+++. +|++|-+.... ..|..++++ +..+|..++. |. +.|+.++-.
T Consensus 170 ~~~~~~-~~~eav~~--aDIVi~aT~s~~pvl~~~~l~------~G~~V~~vGs~~p~-~~El~~~~~ 227 (313)
T 3hdj_A 170 VPARMA-APADIAAQ--ADIVVTATRSTTPLFAGQALR------AGAFVGAIGSSLPH-TRELDDEAL 227 (313)
T ss_dssp SCEEEC-CHHHHHHH--CSEEEECCCCSSCSSCGGGCC------TTCEEEECCCSSTT-CCCCCHHHH
T ss_pred CeEEEe-CHHHHHhh--CCEEEEccCCCCcccCHHHcC------CCcEEEECCCCCCc-hhhcCHHHH
Confidence 1123 89999998 99999765433 366665543 6779998875 44 689988753
No 118
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.83 E-value=0.57 Score=48.92 Aligned_cols=102 Identities=11% Similarity=0.147 Sum_probs=64.3
Q ss_pred CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHH
Q 012398 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDA 404 (464)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~ 404 (464)
.++..+|.|+|+|..|.++|..|.+ .|. +++++|+. .+ ......+.+.. ......++.|+
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~-----~G~-------~V~v~~r~----~~---~~~~l~~~~~~~gi~~~~s~~e~ 72 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIES-----RGY-------TVSIFNRS----RE---KTEEVIAENPGKKLVPYYTVKEF 72 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS----HH---HHHHHHHHSTTSCEEECSSHHHH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHh-----CCC-------eEEEEeCC----HH---HHHHHHhhCCCCCeEEeCCHHHH
Confidence 3566789999999999999999875 353 57777763 11 11111111100 01123589999
Q ss_pred HhcC-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 012398 405 VKAI-KPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 447 (464)
Q Consensus 405 v~~v-kptvLIG~S~~~g~ft~evv~~Ma~~~-erPIIFaLSNPt 447 (464)
++.. ++|++| ++.+++...+++++.+...- +..||.-+||-.
T Consensus 73 v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 73 VESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HHTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred HhCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 8753 488877 55555567889998887654 356888899865
No 119
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=90.83 E-value=1.8 Score=42.98 Aligned_cols=119 Identities=12% Similarity=0.129 Sum_probs=77.5
Q ss_pred CCCceeecCccc---hhHHHHHHHHHHHHH-------------------hCCCCCcceEEEeCcchHHHHHHHHHHHHHH
Q 012398 296 SSHLVFNDDIQG---TASVVLAGILSALKL-------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMS 353 (464)
Q Consensus 296 ~~~~~FnDDiQG---TaaV~LAgll~Alk~-------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~ 353 (464)
..|++.|---.. +|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 91 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~--- 167 (331)
T 1xdw_A 91 LGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGVVGLGRIGRVAAQIFHG--- 167 (331)
T ss_dssp TTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEEECCSHHHHHHHHHHHH---
T ss_pred CCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEEECcCHHHHHHHHHHHH---
Confidence 467777753333 344478888887761 2346889999999999999999998864
Q ss_pred HhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCCCcEEEecc----CCCCCCCHHHHH
Q 012398 354 KQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVE 429 (464)
Q Consensus 354 ~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~ft~evv~ 429 (464)
.|+ +++.+|+.. . .... .++. ..+|.|+++. .|+++=.- ...+.|+++.++
T Consensus 168 --~G~-------~V~~~d~~~----~--~~~~----~~~~----~~~l~ell~~--aDvV~~~~p~t~~t~~li~~~~l~ 222 (331)
T 1xdw_A 168 --MGA-------TVIGEDVFE----I--KGIE----DYCT----QVSLDEVLEK--SDIITIHAPYIKENGAVVTRDFLK 222 (331)
T ss_dssp --TTC-------EEEEECSSC----C--CSCT----TTCE----ECCHHHHHHH--CSEEEECCCCCTTTCCSBCHHHHH
T ss_pred --CCC-------EEEEECCCc----c--HHHH----hccc----cCCHHHHHhh--CCEEEEecCCchHHHHHhCHHHHh
Confidence 254 588888742 1 1111 1111 2378888876 88887531 123578888888
Q ss_pred HHHcCCCCcEEEEcCC
Q 012398 430 AMASFNEKPVIFALSN 445 (464)
Q Consensus 430 ~Ma~~~erPIIFaLSN 445 (464)
.|. +..++.=+|.
T Consensus 223 ~mk---~ga~lin~sr 235 (331)
T 1xdw_A 223 KMK---DGAILVNCAR 235 (331)
T ss_dssp TSC---TTEEEEECSC
T ss_pred hCC---CCcEEEECCC
Confidence 885 4567776663
No 120
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=90.80 E-value=0.21 Score=48.81 Aligned_cols=99 Identities=20% Similarity=0.304 Sum_probs=61.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCC----chhchhhhhhcCC---CCCHHH
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESL----QHFKKPWAHEHAP---IKSLLD 403 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l----~~~k~~fa~~~~~---~~~L~e 403 (464)
||.|+|||..|.++|..+... ++ -..++++|.+- ++-+.+ .+. .++...... ..++.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~----~~~~~~~~~l~~~-~~~~~~~~~i~~t~d~~~ 66 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVE----GIPQGKALDMYES-GPVGLFDTKVTGSNDYAD 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSS----SHHHHHHHHHHTT-HHHHTCCCEEEEESCGGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hHHHHHHHhHHhh-hhcccCCcEEEECCCHHH
Confidence 799999999999999987642 22 25799999862 211111 110 011100111 145655
Q ss_pred HHhcCCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 404 AVKAIKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 404 ~v~~vkptvLIG~S~~~---g~-----------ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
++. +|++|=+...+ |- +-+++++.|+++++..+|+-.|||.
T Consensus 67 -l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~ 121 (310)
T 1guz_A 67 -TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPL 121 (310)
T ss_dssp -GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSH
T ss_pred -HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCch
Confidence 776 89888554332 21 1257788888888888988899997
No 121
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=90.76 E-value=0.76 Score=46.10 Aligned_cols=100 Identities=18% Similarity=0.143 Sum_probs=60.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhc--hhhhhh---cCC---CCC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFK--KPWAHE---HAP---IKS 400 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k--~~fa~~---~~~---~~~ 400 (464)
..||.|+|+|+-|.++|..|... | .+++++|++--. .+.+.... ..|... .+. ..+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~~----~~~i~~~~~~~~~l~g~~l~~~i~~t~d 92 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESDH----VDEMQAEGVNNRYLPNYPFPETLKAYCD 92 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHHH----HHHHHHHSSBTTTBTTCCCCTTEEEESC
T ss_pred CCeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHHH----HHHHHHcCCCcccCCCCccCCCeEEECC
Confidence 36899999999999999988753 4 357777774110 00011100 001100 011 257
Q ss_pred HHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 012398 401 LLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPTS 448 (464)
Q Consensus 401 L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~-erPIIFaLSNPt~ 448 (464)
+.|+++. +|++| ++.+. .+.+++++.++.+. +..+|..++|...
T Consensus 93 ~~ea~~~--aDvVi-laVp~-~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 93 LKASLEG--VTDIL-IVVPS-FAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HHHHHTT--CCEEE-ECCCH-HHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HHHHHhc--CCEEE-ECCCH-HHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 8888886 88877 44433 47788888887654 4567778888553
No 122
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=90.70 E-value=0.33 Score=47.58 Aligned_cols=102 Identities=23% Similarity=0.296 Sum_probs=64.7
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc--cC-cccCCCccCCchhchhhhhhcCCC----CCHH
Q 012398 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS--KG-LIVSSRKESLQHFKKPWAHEHAPI----KSLL 402 (464)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~--~G-Ll~~~r~~~l~~~k~~fa~~~~~~----~~L~ 402 (464)
||+|.|| |..|..++..|+. .|+ ...++++|. +- .+.... .++.+. .++....-.+ .++.
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~-~dl~~~-~~~~~~~~~i~~~~d~l~ 69 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPF-----MKDLVLIGREHSINKLEGLR-EDIYDA-LAGTRSDANIYVESDENL 69 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTT-----CCEEEEEECGGGHHHHHHHH-HHHHHH-HTTSCCCCEEEEEETTCG
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCC-----CCEEEEEcCCCchhhhHHHH-HHHHHh-HHhcCCCeEEEeCCcchH
Confidence 8999999 9999999888753 343 246899997 21 000000 012111 1221100011 1378
Q ss_pred HHHhcCCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 403 DAVKAIKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 403 e~v~~vkptvLIG~S~~~---g~-----------ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+++++ +|++|=+.+.+ |- .++++++.|.+++ +.+|+--|||.
T Consensus 70 ~al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv 125 (313)
T 1hye_A 70 RIIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV 125 (313)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH
T ss_pred HHhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH
Confidence 88987 99998666544 21 4678899999999 99999999997
No 123
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=90.69 E-value=0.13 Score=50.59 Aligned_cols=96 Identities=19% Similarity=0.397 Sum_probs=63.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh------hcCCC---CCH
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH------EHAPI---KSL 401 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~------~~~~~---~~L 401 (464)
||.|+|||..|.++|-.++.. |+ ..++|+|.+ .++ +......+.+ ....+ .+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~----~~~---~~g~~~dl~~~~~~~~~~~~i~~t~d~ 62 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIART----PGK---PQGEALDLAHAAAELGVDIRISGSNSY 62 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSS----TTH---HHHHHHHHHHHHHHHTCCCCEEEESCG
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCC----hhh---HHHHHHHHHHhhhhcCCCeEEEECCCH
Confidence 689999999999999777542 54 369999985 222 1111111111 11111 355
Q ss_pred HHHHhcCCCcEEEeccCCCC---C-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 402 LDAVKAIKPTMLMGTSGVGK---T-----------FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 402 ~e~v~~vkptvLIG~S~~~g---~-----------ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+++++ +|++|=+.+.+. - +-+++++.|.++++..+|+-.|||.
T Consensus 63 -~a~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (308)
T 2d4a_B 63 -EDMRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPV 119 (308)
T ss_dssp -GGGTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred -HHhCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCch
Confidence 67887 999986655442 1 2568888899989998877789997
No 124
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.65 E-value=0.12 Score=51.58 Aligned_cols=106 Identities=15% Similarity=0.180 Sum_probs=65.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCC-CCCHHHHHhc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAP-IKSLLDAVKA 407 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~-~~~L~e~v~~ 407 (464)
..||.|+|||..|.++|..|... |+ ...+.++|.+-=...+-.-+|.+. .+|....-. ..+..+++++
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~-----~~-----~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~a~~~ 73 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ-----GI-----TDELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYEDCKD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGGGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEecchHHHHHHHHHHHhc-cccccCCeEEEeCcHHHhCC
Confidence 46899999999999999988753 54 258999997410000000012222 233211000 1122467776
Q ss_pred CCCcEEEeccCC---CCC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 408 IKPTMLMGTSGV---GKT-----------FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 408 vkptvLIG~S~~---~g~-----------ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+|++|=+.+. +|- +-+++++.+++++++.+|+-.|||.
T Consensus 74 --aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPv 125 (326)
T 3pqe_A 74 --ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPV 125 (326)
T ss_dssp --CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred --CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChH
Confidence 9988744433 331 1267888899999999999999997
No 125
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=90.62 E-value=0.19 Score=50.03 Aligned_cols=107 Identities=21% Similarity=0.267 Sum_probs=67.3
Q ss_pred CCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC--cccCCCccCCchhchhhhhhcCCC--CCHH
Q 012398 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG--LIVSSRKESLQHFKKPWAHEHAPI--KSLL 402 (464)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G--Ll~~~r~~~l~~~k~~fa~~~~~~--~~L~ 402 (464)
.+..||.|+|||..|.++|..+.. .|+ ..+.++|.+- -..++...++.+. .++......+ .+-.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~-----~g~------~~v~l~D~~~~~~~~~g~a~dl~~~-~~~~~~~~~i~~t~d~ 73 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQ-----KEL------ADVVLVDIPQLENPTKGKALDMLEA-SPVQGFDANIIGTSDY 73 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECCGGGHHHHHHHHHHHHHH-HHHHTCCCCEEEESCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEeccchHHHHHHhhhhHHHh-hhhccCCCEEEEcCCH
Confidence 345799999999999999998875 254 2789999861 1111111112211 2333211111 1224
Q ss_pred HHHhcCCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 403 DAVKAIKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 403 e~v~~vkptvLIG~S~~~---g~-----------ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+++++ +|++|=+.+.+ |- +-+++++.+++++++.+|+-.|||.
T Consensus 74 ~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPv 130 (315)
T 3tl2_A 74 ADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPV 130 (315)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChH
Confidence 67776 99887554333 31 2368888899999999999999997
No 126
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=90.58 E-value=3 Score=43.23 Aligned_cols=119 Identities=16% Similarity=0.211 Sum_probs=73.2
Q ss_pred CCCceeecCcc---chhHHHHHHHHHHHHH------------------hCCCCCcceEEEeCcchHHHHHHHHHHHHHHH
Q 012398 296 SSHLVFNDDIQ---GTASVVLAGILSALKL------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSK 354 (464)
Q Consensus 296 ~~~~~FnDDiQ---GTaaV~LAgll~Alk~------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~ 354 (464)
..|+|||---- .+|=-++|.+|+..|- .+..|.+.++.|+|.|..|..+|+.+..
T Consensus 102 ~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~---- 177 (416)
T 3k5p_A 102 RGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAES---- 177 (416)
T ss_dssp TTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHH----
T ss_pred cCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHH----
Confidence 57888886432 3555678888888753 2567899999999999999999998764
Q ss_pred hcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCCCcEEEeccC----CCCCCCHHHHHH
Q 012398 355 QTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVEA 430 (464)
Q Consensus 355 ~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~ft~evv~~ 430 (464)
.|+ +++.+|+..-... . . + ....+|.|+++. .|+++=.-- ..+.|+++.++.
T Consensus 178 -~G~-------~V~~yd~~~~~~~------~-~----~---~~~~sl~ell~~--aDvV~lhvPlt~~T~~li~~~~l~~ 233 (416)
T 3k5p_A 178 -LGM-------TVRYYDTSDKLQY------G-N----V---KPAASLDELLKT--SDVVSLHVPSSKSTSKLITEAKLRK 233 (416)
T ss_dssp -TTC-------EEEEECTTCCCCB------T-T----B---EECSSHHHHHHH--CSEEEECCCC-----CCBCHHHHHH
T ss_pred -CCC-------EEEEECCcchhcc------c-C----c---EecCCHHHHHhh--CCEEEEeCCCCHHHhhhcCHHHHhh
Confidence 365 6888887521110 0 0 0 112456666665 666653211 114566666666
Q ss_pred HHcCCCCcEEEEcCC
Q 012398 431 MASFNEKPVIFALSN 445 (464)
Q Consensus 431 Ma~~~erPIIFaLSN 445 (464)
|. +..++.=.|.
T Consensus 234 mk---~gailIN~aR 245 (416)
T 3k5p_A 234 MK---KGAFLINNAR 245 (416)
T ss_dssp SC---TTEEEEECSC
T ss_pred CC---CCcEEEECCC
Confidence 63 4455555443
No 127
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=90.40 E-value=0.58 Score=45.50 Aligned_cols=111 Identities=10% Similarity=0.146 Sum_probs=64.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCC-CccCCchhc--hhhhhh---cCC---CC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSS-RKESLQHFK--KPWAHE---HAP---IK 399 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~-r~~~l~~~k--~~fa~~---~~~---~~ 399 (464)
..||.|+|+|..|.++|..|..+.... . ....+++++|++.-.... +.+.+.... ..|-.. ... ..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~-~----~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQL-A----QFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVP 82 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHC-T----TEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcc-c----CCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEc
Confidence 358999999999999999997652110 0 001468888875321100 000011100 001000 001 14
Q ss_pred CHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 012398 400 SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPTS 448 (464)
Q Consensus 400 ~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~-erPIIFaLSNPt~ 448 (464)
++.++++. +|++| ++.++ ...+++++.++.+. +..+|..++|-..
T Consensus 83 ~~~~~~~~--aD~Vi-lav~~-~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 83 DVVQAAED--ADILI-FVVPH-QFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp SHHHHHTT--CSEEE-ECCCG-GGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred CHHHHHcC--CCEEE-EeCCH-HHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 78888886 89877 44433 57889999987654 4668888999654
No 128
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=90.37 E-value=2.3 Score=41.91 Aligned_cols=116 Identities=18% Similarity=0.198 Sum_probs=72.0
Q ss_pred CCCceeecCcc---chhHHHHHHHHHHHHH---------------------hCCCCCcceEEEeCcchHHHHHHHHHHHH
Q 012398 296 SSHLVFNDDIQ---GTASVVLAGILSALKL---------------------VGGTLADQTFLFLGAGEAGTGIAELIALE 351 (464)
Q Consensus 296 ~~~~~FnDDiQ---GTaaV~LAgll~Alk~---------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~a 351 (464)
..|++.|---- .+|=-+++.+|+..|- .+..+.+.+|.|+|.|..|..+|+.+..
T Consensus 87 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~- 165 (311)
T 2cuk_A 87 RGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALA- 165 (311)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHH-
T ss_pred CCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHH-
Confidence 34666654322 2344467777777652 2457889999999999999999998864
Q ss_pred HHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCCCcEEEecc----CCCCCCCHHH
Q 012398 352 MSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEV 427 (464)
Q Consensus 352 ~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~ft~ev 427 (464)
.|+ +++.+|+.. .. .. + ...+|.|+++. .|+++=.- ...+.++++.
T Consensus 166 ----~G~-------~V~~~d~~~----~~---~~------~----~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~ 215 (311)
T 2cuk_A 166 ----FGM-------RVVYHARTP----KP---LP------Y----PFLSLEELLKE--ADVVSLHTPLTPETHRLLNRER 215 (311)
T ss_dssp ----TTC-------EEEEECSSC----CS---SS------S----CBCCHHHHHHH--CSEEEECCCCCTTTTTCBCHHH
T ss_pred ----CCC-------EEEEECCCC----cc---cc------c----ccCCHHHHHhh--CCEEEEeCCCChHHHhhcCHHH
Confidence 254 588888742 11 11 1 12457777765 77766441 1224666666
Q ss_pred HHHHHcCCCCcEEEEcCC
Q 012398 428 VEAMASFNEKPVIFALSN 445 (464)
Q Consensus 428 v~~Ma~~~erPIIFaLSN 445 (464)
++.|. +..++.=.|.
T Consensus 216 l~~mk---~ga~lin~sr 230 (311)
T 2cuk_A 216 LFAMK---RGAILLNTAR 230 (311)
T ss_dssp HTTSC---TTCEEEECSC
T ss_pred HhhCC---CCcEEEECCC
Confidence 66663 4556666665
No 129
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=90.27 E-value=1.8 Score=42.54 Aligned_cols=37 Identities=19% Similarity=0.204 Sum_probs=31.2
Q ss_pred CCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
..|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~dr~ 154 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYTRS 154 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSS
T ss_pred eeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEecc
Confidence 468899999999999999999998753 64 68888875
No 130
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=90.24 E-value=2.1 Score=43.09 Aligned_cols=123 Identities=15% Similarity=0.094 Sum_probs=76.9
Q ss_pred CCCceeecCcc---chhHHHHHHHHHHHHH--------------------hCCCCCcceEEEeCcchHHHHHHHHHHHHH
Q 012398 296 SSHLVFNDDIQ---GTASVVLAGILSALKL--------------------VGGTLADQTFLFLGAGEAGTGIAELIALEM 352 (464)
Q Consensus 296 ~~~~~FnDDiQ---GTaaV~LAgll~Alk~--------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~a~ 352 (464)
..|++.|---- .+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 108 ~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~-- 185 (351)
T 3jtm_A 108 AGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKP-- 185 (351)
T ss_dssp TTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGG--
T ss_pred cCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHH--
Confidence 45666654322 3444567777777752 2567999999999999999999998864
Q ss_pred HHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCCCcEEEecc----CCCCCCCHHHH
Q 012398 353 SKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVV 428 (464)
Q Consensus 353 ~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~ft~evv 428 (464)
.|+ +++.+|+... . ....+. . ......+|.|+++. .|+++=.- ...+.|+++.+
T Consensus 186 ---~G~-------~V~~~dr~~~----~---~~~~~~-~--g~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 243 (351)
T 3jtm_A 186 ---FGC-------NLLYHDRLQM----A---PELEKE-T--GAKFVEDLNEMLPK--CDVIVINMPLTEKTRGMFNKELI 243 (351)
T ss_dssp ---GCC-------EEEEECSSCC----C---HHHHHH-H--CCEECSCHHHHGGG--CSEEEECSCCCTTTTTCBSHHHH
T ss_pred ---CCC-------EEEEeCCCcc----C---HHHHHh-C--CCeEcCCHHHHHhc--CCEEEECCCCCHHHHHhhcHHHH
Confidence 364 5887887421 0 000000 0 00112478888886 88877321 12247888888
Q ss_pred HHHHcCCCCcEEEEcCC
Q 012398 429 EAMASFNEKPVIFALSN 445 (464)
Q Consensus 429 ~~Ma~~~erPIIFaLSN 445 (464)
+.|. +..+|.=.|+
T Consensus 244 ~~mk---~gailIN~aR 257 (351)
T 3jtm_A 244 GKLK---KGVLIVNNAR 257 (351)
T ss_dssp HHSC---TTEEEEECSC
T ss_pred hcCC---CCCEEEECcC
Confidence 8885 5667666554
No 131
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=90.17 E-value=0.51 Score=47.53 Aligned_cols=105 Identities=15% Similarity=0.316 Sum_probs=65.5
Q ss_pred CCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCC---CCCHH
Q 012398 327 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAP---IKSLL 402 (464)
Q Consensus 327 l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~---~~~L~ 402 (464)
+...||+|+|| |..|..+|-.++. .|+ ...+.++|.+-=...+-.-+|.+. .|.. .. ..++.
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~-----~~evvLiDi~~~k~~g~a~DL~~~--~~~~--~~i~~t~d~~ 71 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRL-----TPNLCLYDPFAVGLEGVAEEIRHC--GFEG--LNLTFTSDIK 71 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTC-----CSCEEEECSCHHHHHHHHHHHHHH--CCTT--CCCEEESCHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCC-----CCEEEEEeCCchhHHHHHHhhhhC--cCCC--CceEEcCCHH
Confidence 34679999998 9999999966654 365 246999997411001000012221 1211 11 15789
Q ss_pred HHHhcCCCcEEEeccCCC---C-----------CCCHHHHHHHHcCCCCcE-EEEcCCCC
Q 012398 403 DAVKAIKPTMLMGTSGVG---K-----------TFTKEVVEAMASFNEKPV-IFALSNPT 447 (464)
Q Consensus 403 e~v~~vkptvLIG~S~~~---g-----------~ft~evv~~Ma~~~erPI-IFaLSNPt 447 (464)
+++++ +|++|=+.+.+ | ..-+++++.+++++.+-+ |+-.|||.
T Consensus 72 ~al~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPv 129 (343)
T 3fi9_A 72 EALTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPA 129 (343)
T ss_dssp HHHTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSH
T ss_pred HHhCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCch
Confidence 99997 99988444332 2 134577788888998885 88899996
No 132
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=90.16 E-value=3.5 Score=42.24 Aligned_cols=66 Identities=20% Similarity=0.240 Sum_probs=49.8
Q ss_pred CCCceeecCcc---chhHHHHHHHHHHHHH------------------hCCCCCcceEEEeCcchHHHHHHHHHHHHHHH
Q 012398 296 SSHLVFNDDIQ---GTASVVLAGILSALKL------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSK 354 (464)
Q Consensus 296 ~~~~~FnDDiQ---GTaaV~LAgll~Alk~------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~ 354 (464)
..|+|||---- .+|=-++|.+|+..|- .+..|.+.++.|+|-|..|..+|+.+..
T Consensus 91 ~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~---- 166 (404)
T 1sc6_A 91 RGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAES---- 166 (404)
T ss_dssp TTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHH----
T ss_pred CCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHH----
Confidence 46778875433 3455578888888763 2567999999999999999999998864
Q ss_pred hcCCChhhhcCeEEEEccc
Q 012398 355 QTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 355 ~~G~s~~eA~~~i~lvD~~ 373 (464)
.|+ +++.+|+.
T Consensus 167 -~G~-------~V~~~d~~ 177 (404)
T 1sc6_A 167 -LGM-------YVYFYDIE 177 (404)
T ss_dssp -TTC-------EEEEECSS
T ss_pred -CCC-------EEEEEcCC
Confidence 364 58888874
No 133
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=90.10 E-value=0.97 Score=45.07 Aligned_cols=66 Identities=24% Similarity=0.326 Sum_probs=47.7
Q ss_pred CCCceeecCc---cchhHHHHHHHHHHHHH------------------hCCCCCcceEEEeCcchHHHHHHHHHHHHHHH
Q 012398 296 SSHLVFNDDI---QGTASVVLAGILSALKL------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSK 354 (464)
Q Consensus 296 ~~~~~FnDDi---QGTaaV~LAgll~Alk~------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~ 354 (464)
..|++.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+..
T Consensus 83 ~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~---- 158 (324)
T 3evt_A 83 AGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASA---- 158 (324)
T ss_dssp TTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHH----
T ss_pred CCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHh----
Confidence 4577776542 23444567777776642 2667999999999999999999998864
Q ss_pred hcCCChhhhcCeEEEEccc
Q 012398 355 QTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 355 ~~G~s~~eA~~~i~lvD~~ 373 (464)
.|+ +++.+|+.
T Consensus 159 -~G~-------~V~~~dr~ 169 (324)
T 3evt_A 159 -LGM-------HVIGVNTT 169 (324)
T ss_dssp -TTC-------EEEEEESS
T ss_pred -CCC-------EEEEECCC
Confidence 365 68888875
No 134
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=90.05 E-value=0.47 Score=44.83 Aligned_cols=104 Identities=24% Similarity=0.333 Sum_probs=64.1
Q ss_pred HHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh
Q 012398 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 393 (464)
Q Consensus 314 Agll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~ 393 (464)
.|++.+++-.+.++++ +++|+|+|.+|.++|..+.. .|. +++++|++ .++ .....+.|..
T Consensus 102 ~g~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~-----~g~-------~v~v~~r~----~~~---~~~l~~~~~~ 161 (263)
T 2d5c_A 102 PGFLEALKAGGIPLKG-PALVLGAGGAGRAVAFALRE-----AGL-------EVWVWNRT----PQR---ALALAEEFGL 161 (263)
T ss_dssp HHHHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS----HHH---HHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC----HHH---HHHHHHHhcc
Confidence 5888889888889999 99999999999999988764 242 58888874 111 1111111111
Q ss_pred hcCCCCCHHHHHhcCCCcEEEeccCCCCCCC--HHHHHHHHcCCCCcEEEEcCC
Q 012398 394 EHAPIKSLLDAVKAIKPTMLMGTSGVGKTFT--KEVVEAMASFNEKPVIFALSN 445 (464)
Q Consensus 394 ~~~~~~~L~e~v~~vkptvLIG~S~~~g~ft--~evv~~Ma~~~erPIIFaLSN 445 (464)
. ..++.++ +. +|++|-+...+ ... ++.+. .....+..+|+-++.
T Consensus 162 ~---~~~~~~~-~~--~Divi~~tp~~-~~~~~~~~l~-~~~l~~g~~viD~~~ 207 (263)
T 2d5c_A 162 R---AVPLEKA-RE--ARLLVNATRVG-LEDPSASPLP-AELFPEEGAAVDLVY 207 (263)
T ss_dssp E---ECCGGGG-GG--CSEEEECSSTT-TTCTTCCSSC-GGGSCSSSEEEESCC
T ss_pred c---hhhHhhc-cC--CCEEEEccCCC-CCCCCCCCCC-HHHcCCCCEEEEeec
Confidence 1 3467776 54 99999766544 211 01221 111235668888763
No 135
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=90.05 E-value=0.35 Score=48.34 Aligned_cols=32 Identities=28% Similarity=0.333 Sum_probs=25.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~ 372 (464)
-.||.|+|||..|.|||..++.+ |+ ++.++|.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~ 37 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDI 37 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECS
T ss_pred CCeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEEC
Confidence 36899999999999999988763 65 4777875
No 136
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=89.99 E-value=0.13 Score=49.26 Aligned_cols=32 Identities=25% Similarity=0.247 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCC
Confidence 5899999999999999988753 53 68888874
No 137
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=89.98 E-value=0.23 Score=45.82 Aligned_cols=93 Identities=14% Similarity=0.192 Sum_probs=56.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEE-EcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWL-VDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI 408 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~l-vD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~v 408 (464)
.||.|+|+|..|.++|..+... |. ++.+ +|++ . +.+....+.+- .....+..++++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~----~---~~~~~l~~~~g--~~~~~~~~~~~~~- 81 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG----P---ASLSSVTDRFG--ASVKAVELKDALQ- 81 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC----G---GGGHHHHHHHT--TTEEECCHHHHTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC----H---HHHHHHHHHhC--CCcccChHHHHhc-
Confidence 5899999999999999988652 53 3454 5552 1 11222111221 0111244566765
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 012398 409 KPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTS 448 (464)
Q Consensus 409 kptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSNPt~ 448 (464)
+|++| ++.++ ...+++++.++. .+..+|+-++||..
T Consensus 82 -aDvVi-lavp~-~~~~~v~~~l~~-~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 82 -ADVVI-LAVPY-DSIADIVTQVSD-WGGQIVVDASNAID 117 (220)
T ss_dssp -SSEEE-EESCG-GGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred -CCEEE-EeCCh-HHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence 88877 33333 466777777765 45668889999873
No 138
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=89.95 E-value=1.3 Score=45.00 Aligned_cols=109 Identities=17% Similarity=0.185 Sum_probs=68.2
Q ss_pred hhHHHHHHHHHHHHH---------------------hCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCe
Q 012398 308 TASVVLAGILSALKL---------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKK 366 (464)
Q Consensus 308 TaaV~LAgll~Alk~---------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~ 366 (464)
+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+.. .|+ +
T Consensus 134 vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~-----fG~-------~ 201 (365)
T 4hy3_A 134 VAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSG-----FRA-------R 201 (365)
T ss_dssp HHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTT-----SCC-------E
T ss_pred HHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhh-----CCC-------E
Confidence 445567777776652 2356889999999999999999998743 354 5
Q ss_pred EEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCCCcEEEec----cCCCCCCCHHHHHHHHcCCCCcEEEE
Q 012398 367 IWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGT----SGVGKTFTKEVVEAMASFNEKPVIFA 442 (464)
Q Consensus 367 i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~----S~~~g~ft~evv~~Ma~~~erPIIFa 442 (464)
++.+|+.. . .+ . .....-...+|.|+++. .|+++=. ....+.|+++.++.|. +..|+.=
T Consensus 202 V~~~d~~~----~-~~---~----~~~~g~~~~~l~ell~~--aDvV~l~~Plt~~T~~li~~~~l~~mk---~gailIN 264 (365)
T 4hy3_A 202 IRVFDPWL----P-RS---M----LEENGVEPASLEDVLTK--SDFIFVVAAVTSENKRFLGAEAFSSMR---RGAAFIL 264 (365)
T ss_dssp EEEECSSS----C-HH---H----HHHTTCEECCHHHHHHS--CSEEEECSCSSCC---CCCHHHHHTSC---TTCEEEE
T ss_pred EEEECCCC----C-HH---H----HhhcCeeeCCHHHHHhc--CCEEEEcCcCCHHHHhhcCHHHHhcCC---CCcEEEE
Confidence 77777641 1 00 0 00101112478888886 8888732 2223578888888885 5667766
Q ss_pred cCC
Q 012398 443 LSN 445 (464)
Q Consensus 443 LSN 445 (464)
.|.
T Consensus 265 ~aR 267 (365)
T 4hy3_A 265 LSR 267 (365)
T ss_dssp CSC
T ss_pred CcC
Confidence 553
No 139
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.65 E-value=0.45 Score=46.26 Aligned_cols=102 Identities=15% Similarity=0.147 Sum_probs=56.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCC--ch-hchhhh-hhcCCCCCHHHHH
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESL--QH-FKKPWA-HEHAPIKSLLDAV 405 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l--~~-~k~~fa-~~~~~~~~L~e~v 405 (464)
.||.|+|+|+-|..+|..|..+ | .++.++|+.-. ..=+...+ +. ....+. .+.....++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~-~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~ 69 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDY-ETVKAKGIRIRSATLGDYTFRPAAVVRSAAELE 69 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTH-HHHHHHCEEEEETTTCCEEECCSCEESCGGGCS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChH-HHHHhCCcEEeecCCCcEEEeeeeeECCHHHcC
Confidence 5899999999999999988653 4 36888887531 00000000 00 000000 0000113455544
Q ss_pred hcCCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 012398 406 KAIKPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPTS 448 (464)
Q Consensus 406 ~~vkptvLIG~S~~~g~ft~evv~~Ma~~~-erPIIFaLSNPt~ 448 (464)
+ .+|++| ++... ..++++++.++.+- +..+|+.+.|-..
T Consensus 70 ~--~~DlVi-lavK~-~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 70 T--KPDCTL-LCIKV-VEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp S--CCSEEE-ECCCC-CTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred C--CCCEEE-EecCC-CChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 3 378777 55544 34567888887543 3456777888663
No 140
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=89.63 E-value=3.3 Score=40.58 Aligned_cols=67 Identities=21% Similarity=0.245 Sum_probs=47.2
Q ss_pred CCCceeecC-ccc--hhHHHHHHHHHHHHHh-----------------CCCCCcceEEEeCcchHHHHHHHHHHHHHHHh
Q 012398 296 SSHLVFNDD-IQG--TASVVLAGILSALKLV-----------------GGTLADQTFLFLGAGEAGTGIAELIALEMSKQ 355 (464)
Q Consensus 296 ~~~~~FnDD-iQG--TaaV~LAgll~Alk~~-----------------g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~ 355 (464)
..+++.|-- ... +|=-+++.+|+..|-. ...|.+.+|.|+|.|..|..+|+.+..
T Consensus 71 ~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~----- 145 (303)
T 1qp8_A 71 PHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAA----- 145 (303)
T ss_dssp TTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHH-----
T ss_pred cCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHH-----
Confidence 467777733 222 3334788888876631 236889999999999999999998864
Q ss_pred cCCChhhhcCeEEEEcccC
Q 012398 356 TKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 356 ~G~s~~eA~~~i~lvD~~G 374 (464)
.|+ +++.+|+..
T Consensus 146 ~G~-------~V~~~dr~~ 157 (303)
T 1qp8_A 146 LGA-------QVRGFSRTP 157 (303)
T ss_dssp TTC-------EEEEECSSC
T ss_pred CCC-------EEEEECCCc
Confidence 354 588888753
No 141
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=89.61 E-value=2 Score=42.55 Aligned_cols=90 Identities=13% Similarity=0.157 Sum_probs=54.6
Q ss_pred CCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHH
Q 012398 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDA 404 (464)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 404 (464)
..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+..- . + .. ..+ .. ...+|.++
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~d~~~~----~-~---~~-~~~--g~-~~~~l~e~ 197 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIP-----FGV-------KLYYWSRHRK----V-N---VE-KEL--KA-RYMDIDEL 197 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSCC----H-H---HH-HHH--TE-EECCHHHH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCCcc----h-h---hh-hhc--Cc-eecCHHHH
Confidence 68999999999999999999998753 353 6888887421 0 0 00 011 00 01267777
Q ss_pred HhcCCCcEEEeccCC----CCCCCHHHHHHHHcCCCCcEEEEcC
Q 012398 405 VKAIKPTMLMGTSGV----GKTFTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 405 v~~vkptvLIG~S~~----~g~ft~evv~~Ma~~~erPIIFaLS 444 (464)
++. +|++|=.-.. .+.++++.++.|. +. ++.-.|
T Consensus 198 l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk---~g-ilin~s 235 (333)
T 2d0i_A 198 LEK--SDIVILALPLTRDTYHIINEERVKKLE---GK-YLVNIG 235 (333)
T ss_dssp HHH--CSEEEECCCCCTTTTTSBCHHHHHHTB---TC-EEEECS
T ss_pred Hhh--CCEEEEcCCCChHHHHHhCHHHHhhCC---CC-EEEECC
Confidence 765 7776633211 2356666677664 34 555444
No 142
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=89.39 E-value=1.6 Score=44.00 Aligned_cols=143 Identities=11% Similarity=0.148 Sum_probs=79.9
Q ss_pred eeeecCCCccH-HHHHHHHcCCCceeecCc---cchhHHHHHHHHHHHHH--------------------hCCCCCcceE
Q 012398 277 IQFEDFANHNA-FELLSKYSSSHLVFNDDI---QGTASVVLAGILSALKL--------------------VGGTLADQTF 332 (464)
Q Consensus 277 Iq~EDf~~~~a-f~iL~ryr~~~~~FnDDi---QGTaaV~LAgll~Alk~--------------------~g~~l~d~ri 332 (464)
|+.-..+..|- .+-..+.+..|.+.|--- +.+|=-+++.+|+..|- .+..|.+.+|
T Consensus 88 I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tv 167 (364)
T 2j6i_A 88 VVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTI 167 (364)
T ss_dssp EEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEE
T ss_pred EEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEE
Confidence 55554444442 122222222566666432 23444568888877662 3678999999
Q ss_pred EEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCCCcE
Q 012398 333 LFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTM 412 (464)
Q Consensus 333 v~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptv 412 (464)
.|+|.|..|..+|+.+.. .|+ ++++.+|+... . .... ..+ ......+|.|+++. .|+
T Consensus 168 gIIG~G~IG~~vA~~l~~-----~G~------~~V~~~d~~~~----~---~~~~-~~~--g~~~~~~l~ell~~--aDv 224 (364)
T 2j6i_A 168 ATIGAGRIGYRVLERLVP-----FNP------KELLYYDYQAL----P---KDAE-EKV--GARRVENIEELVAQ--ADI 224 (364)
T ss_dssp EEECCSHHHHHHHHHHGG-----GCC------SEEEEECSSCC----C---HHHH-HHT--TEEECSSHHHHHHT--CSE
T ss_pred EEECcCHHHHHHHHHHHh-----CCC------cEEEEECCCcc----c---hhHH-Hhc--CcEecCCHHHHHhc--CCE
Confidence 999999999999998853 253 23888886421 0 0000 000 00112367777765 777
Q ss_pred EEeccCC----CCCCCHHHHHHHHcCCCCcEEEEcCC
Q 012398 413 LMGTSGV----GKTFTKEVVEAMASFNEKPVIFALSN 445 (464)
Q Consensus 413 LIG~S~~----~g~ft~evv~~Ma~~~erPIIFaLSN 445 (464)
++=.--. .+.|+++.+..|. +..+|.-.|+
T Consensus 225 V~l~~P~t~~t~~li~~~~l~~mk---~ga~lIn~ar 258 (364)
T 2j6i_A 225 VTVNAPLHAGTKGLINKELLSKFK---KGAWLVNTAR 258 (364)
T ss_dssp EEECCCCSTTTTTCBCHHHHTTSC---TTEEEEECSC
T ss_pred EEECCCCChHHHHHhCHHHHhhCC---CCCEEEECCC
Confidence 6633211 1466677776664 4556665554
No 143
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=89.38 E-value=4.4 Score=40.15 Aligned_cols=120 Identities=18% Similarity=0.154 Sum_probs=77.1
Q ss_pred CCCceeecCccc---hhHHHHHHHHHHHHH------------------hCCCCCcceEEEeCcchHHHHHHHHHHHHHHH
Q 012398 296 SSHLVFNDDIQG---TASVVLAGILSALKL------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSK 354 (464)
Q Consensus 296 ~~~~~FnDDiQG---TaaV~LAgll~Alk~------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~ 354 (464)
..|++.|----. +|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 92 ~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~---- 167 (333)
T 1j4a_A 92 LGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEG---- 167 (333)
T ss_dssp TTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHH----
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHH----
Confidence 467777753333 344478888887762 2356889999999999999999998864
Q ss_pred hcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCCCcEEEeccC----CCCCCCHHHHHH
Q 012398 355 QTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVEA 430 (464)
Q Consensus 355 ~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~ft~evv~~ 430 (464)
.|+ +++.+|+.. . ..+ ..++. ...++.|+++. .|+++=.-. ..+.|+++.++.
T Consensus 168 -~G~-------~V~~~d~~~----~--~~~----~~~~~---~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~ 224 (333)
T 1j4a_A 168 -FGA-------KVITYDIFR----N--PEL----EKKGY---YVDSLDDLYKQ--ADVISLHVPDVPANVHMINDESIAK 224 (333)
T ss_dssp -TTC-------EEEEECSSC----C--HHH----HHTTC---BCSCHHHHHHH--CSEEEECSCCCGGGTTCBSHHHHHH
T ss_pred -CCC-------EEEEECCCc----c--hhH----HhhCe---ecCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHHHHhh
Confidence 364 588888742 1 101 11211 12368888876 788774321 124677888888
Q ss_pred HHcCCCCcEEEEcCC
Q 012398 431 MASFNEKPVIFALSN 445 (464)
Q Consensus 431 Ma~~~erPIIFaLSN 445 (464)
|. +..++.-.|.
T Consensus 225 mk---~ga~lIn~ar 236 (333)
T 1j4a_A 225 MK---QDVVIVNVSR 236 (333)
T ss_dssp SC---TTEEEEECSC
T ss_pred CC---CCcEEEECCC
Confidence 85 4567666654
No 144
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=89.19 E-value=0.46 Score=47.14 Aligned_cols=110 Identities=7% Similarity=0.121 Sum_probs=61.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCC-CccCCchhc--hhhhhh------cCCCCC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSS-RKESLQHFK--KPWAHE------HAPIKS 400 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~-r~~~l~~~k--~~fa~~------~~~~~~ 400 (464)
.||.|+|+|..|.++|..|..+.... . .-..+++++|+..-+... +.+.+.... ..|-.. .....+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~----~-~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 96 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNN----Y-LFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSD 96 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHC----T-TBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCcc----C-CCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECC
Confidence 47999999999999999998652110 0 000468888875321000 000011100 001000 001246
Q ss_pred HHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHc----CC-CCcEEEEcCCCCC
Q 012398 401 LLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMAS----FN-EKPVIFALSNPTS 448 (464)
Q Consensus 401 L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~----~~-erPIIFaLSNPt~ 448 (464)
+.|+++. +|++| ++.++ ...+++++.++. +. +..+|..++|-.+
T Consensus 97 ~~ea~~~--aDvVi-lav~~-~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 97 LASVIND--ADLLI-FIVPC-QYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp THHHHTT--CSEEE-ECCCH-HHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred HHHHHcC--CCEEE-EcCCH-HHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 8888876 88777 33333 577888888875 33 4568888998653
No 145
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=89.15 E-value=1.1 Score=43.67 Aligned_cols=108 Identities=15% Similarity=0.157 Sum_probs=64.5
Q ss_pred HHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhh
Q 012398 315 GILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE 394 (464)
Q Consensus 315 gll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~ 394 (464)
+.+++..+. +....+|.|+|+|..|..+++.+... .|+ ++++++|+. .++ . +.|++.
T Consensus 123 ~~la~~~la--~~~~~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~~~---~----~~l~~~ 179 (312)
T 2i99_A 123 SAIATKFLK--PPSSEVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----KEN---A----EKFADT 179 (312)
T ss_dssp HHHHHHHHS--CTTCCEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----HHH---H----HHHHHH
T ss_pred HHHHHHHhC--CCCCcEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---H----HHHHHH
Confidence 445553332 45677999999999999999888653 242 578888763 111 1 223322
Q ss_pred c----CCCCCHHHHHhcCCCcEEEeccCC-CCCCCHHHHHHHHcCCCCcEEEEcCC--CCCCCCCCH
Q 012398 395 H----APIKSLLDAVKAIKPTMLMGTSGV-GKTFTKEVVEAMASFNEKPVIFALSN--PTSQSECTA 454 (464)
Q Consensus 395 ~----~~~~~L~e~v~~vkptvLIG~S~~-~g~ft~evv~~Ma~~~erPIIFaLSN--Pt~~~E~tp 454 (464)
. ....++.|+++. +|++|=+... ..+|.+++ + .+..+|+.+|. |. .-|+.+
T Consensus 180 ~~~~~~~~~~~~e~v~~--aDiVi~atp~~~~v~~~~~---l---~~g~~vi~~g~~~p~-~~el~~ 237 (312)
T 2i99_A 180 VQGEVRVCSSVQEAVAG--ADVIITVTLATEPILFGEW---V---KPGAHINAVGASRPD-WRELDD 237 (312)
T ss_dssp SSSCCEECSSHHHHHTT--CSEEEECCCCSSCCBCGGG---S---CTTCEEEECCCCSTT-CCSBCH
T ss_pred hhCCeEEeCCHHHHHhc--CCEEEEEeCCCCcccCHHH---c---CCCcEEEeCCCCCCC-ceeccH
Confidence 1 124689999987 8998854322 22444322 2 35668888853 53 355554
No 146
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=88.91 E-value=0.42 Score=47.25 Aligned_cols=39 Identities=21% Similarity=0.289 Sum_probs=34.3
Q ss_pred CCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
++|++.||+|+|+|..|..+|+.|+.+ |+ .+|.++|.+=
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~a-----GV------G~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRC-----GI------GKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHc-----CC------CEEEEECCCc
Confidence 579999999999999999999999876 64 6899999863
No 147
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=88.77 E-value=4.5 Score=40.63 Aligned_cols=118 Identities=14% Similarity=0.245 Sum_probs=78.0
Q ss_pred CCceeecCccc---hhHHHHHHHHHHHHH--------------------hCCCCCcceEEEeCcchHHHHHHHHHHHHHH
Q 012398 297 SHLVFNDDIQG---TASVVLAGILSALKL--------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMS 353 (464)
Q Consensus 297 ~~~~FnDDiQG---TaaV~LAgll~Alk~--------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~ 353 (464)
.|++.|----. +|=-+++-+|+..|- .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 93 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~--- 169 (343)
T 2yq5_A 93 NLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSA--- 169 (343)
T ss_dssp -CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHH---
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhh---
Confidence 57777753333 444568888877651 2346789999999999999999998864
Q ss_pred HhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCCCcEEEeccC----CCCCCCHHHHH
Q 012398 354 KQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVE 429 (464)
Q Consensus 354 ~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~ft~evv~ 429 (464)
.|+ +++.+|+.. . .... ..+ ...+|.|+++. .|+++=.-- ..+.|+++.++
T Consensus 170 --~G~-------~V~~~d~~~----~--~~~~----~~~----~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l~ 224 (343)
T 2yq5_A 170 --MGA-------KVIAYDVAY----N--PEFE----PFL----TYTDFDTVLKE--ADIVSLHTPLFPSTENMIGEKQLK 224 (343)
T ss_dssp --TTC-------EEEEECSSC----C--GGGT----TTC----EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHH
T ss_pred --CCC-------EEEEECCCh----h--hhhh----ccc----cccCHHHHHhc--CCEEEEcCCCCHHHHHHhhHHHHh
Confidence 264 688888752 1 1010 011 11378898887 888874422 23588889888
Q ss_pred HHHcCCCCcEEEEcCC
Q 012398 430 AMASFNEKPVIFALSN 445 (464)
Q Consensus 430 ~Ma~~~erPIIFaLSN 445 (464)
.|. +..++.=.|.
T Consensus 225 ~mk---~gailIN~aR 237 (343)
T 2yq5_A 225 EMK---KSAYLINCAR 237 (343)
T ss_dssp HSC---TTCEEEECSC
T ss_pred hCC---CCcEEEECCC
Confidence 885 5667776654
No 148
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=88.76 E-value=0.31 Score=48.17 Aligned_cols=104 Identities=20% Similarity=0.264 Sum_probs=65.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCC--CCHHHHHhcC
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI--KSLLDAVKAI 408 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~--~~L~e~v~~v 408 (464)
||.|+|||..|..+|-+|... |+ ...+.|+|.+-=...+-.-+|.+. ..|....... .+-.+++++
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~G~a~DL~h~-~~~~~~~~~i~~~~d~~~~~~- 69 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHA-AAGIDKYPKIVGGADYSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHH-HGGGTCCCEEEEESCGGGGTT-
T ss_pred EEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCCCcchhhhhhhhcc-cccCCCCCeEecCCCHHHhCC-
Confidence 799999999999999888652 54 357999997521111111113221 1222111111 122356776
Q ss_pred CCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 409 KPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 409 kptvLIG~S~~~---g~-----------ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+|++|=+.+.+ |- +-+++++.+++++.+.||.-.|||.
T Consensus 70 -aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPv 121 (294)
T 2x0j_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp -CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred -CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 99998555544 31 2257888889999999999999997
No 149
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=88.69 E-value=1.5 Score=44.05 Aligned_cols=95 Identities=12% Similarity=0.205 Sum_probs=62.1
Q ss_pred CCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhh-cCCCCCHHHHH
Q 012398 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-HAPIKSLLDAV 405 (464)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~-~~~~~~L~e~v 405 (464)
++..||.|+|.|..|..+|..|... | -+++++|+. .+ .. +.++.. .....++.|++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~-----G-------~~V~v~dr~----~~---~~----~~l~~~g~~~~~s~~e~~ 76 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKG-----G-------HECVVYDLN----VN---AV----QALEREGIAGARSIEEFC 76 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC----HH---HH----HHHHTTTCBCCSSHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCC----HH---HH----HHHHHCCCEEeCCHHHHH
Confidence 3567999999999999999988763 5 357777763 11 11 122221 12236899999
Q ss_pred hcC-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCC
Q 012398 406 KAI-KPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNP 446 (464)
Q Consensus 406 ~~v-kptvLIG~S~~~g~ft~evv~~Ma~~~-erPIIFaLSNP 446 (464)
+.. +||++| ++.+.+ -.+++++.+...- +..||.-+||-
T Consensus 77 ~~a~~~DvVi-~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~ 117 (358)
T 4e21_A 77 AKLVKPRVVW-LMVPAA-VVDSMLQRMTPLLAANDIVIDGGNS 117 (358)
T ss_dssp HHSCSSCEEE-ECSCGG-GHHHHHHHHGGGCCTTCEEEECSSC
T ss_pred hcCCCCCEEE-EeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCC
Confidence 874 569887 444444 7788888887643 56688878764
No 150
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=88.63 E-value=0.41 Score=49.84 Aligned_cols=99 Identities=13% Similarity=0.147 Sum_probs=64.1
Q ss_pred HHHHHHHHHHhcCCCeeeeeecCCCccHHHHHHHHc-CCCcee--ecCccchhHHHHHHHHHHHHHhC--------CCCC
Q 012398 260 LQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYS-SSHLVF--NDDIQGTASVVLAGILSALKLVG--------GTLA 328 (464)
Q Consensus 260 idefv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr-~~~~~F--nDDiQGTaaV~LAgll~Alk~~g--------~~l~ 328 (464)
+..+++.+...+ ++ |.++-+......++-++|. ..+|++ |+..-+.+.....-|+..+.-.. ..-.
T Consensus 135 ~~~~l~~~a~~~-~~--v~~~~vd~~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~ 211 (521)
T 1hyu_A 135 VVQALNLMAVLN-PR--IKHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKRD 211 (521)
T ss_dssp HHHHHHHHHHHC-TT--EEEEEEETTTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTSC
T ss_pred HHHHHHHHHhHc-Cc--eEEEEEechhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhcccccccccccccC
Confidence 455566666667 43 5565444455677888996 477754 55556667666666666543221 1123
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
..+|+|+|||.||+..|..+.. .|+ ++.++|.+
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~~ 244 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGER 244 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 4679999999999999998764 354 46677653
No 151
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=88.39 E-value=0.75 Score=42.87 Aligned_cols=95 Identities=13% Similarity=0.076 Sum_probs=57.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhc---hhhhhhcCCCCCHHHHHhc
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFK---KPWAHEHAPIKSLLDAVKA 407 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k---~~fa~~~~~~~~L~e~v~~ 407 (464)
||.|+|+|..|..+|..|..+ | .+++++|+.- ++.+.+.... ..+-.. -...+ .++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~~~~-~~~~~-~~~~~~ 63 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----G-------HEVQGWLRVP----QPYCSVNLVETDGSIFNES-LTAND-PDFLAT 63 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSC----CSEEEEEEECTTSCEEEEE-EEESC-HHHHHT
T ss_pred eEEEECcCHHHHHHHHHHHhC-----C-------CCEEEEEcCc----cceeeEEEEcCCCceeeee-eeecC-ccccCC
Confidence 799999999999999988753 4 3688888752 2111121110 000000 00123 467775
Q ss_pred CCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 012398 408 IKPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 447 (464)
Q Consensus 408 vkptvLIG~S~~~g~ft~evv~~Ma~~~-erPIIFaLSNPt 447 (464)
+|++| ++..+. -.+++++.++.+. +..+|..++|..
T Consensus 64 --~d~vi-~~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 64 --SDLLL-VTLKAW-QVSDAVKSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp --CSEEE-ECSCGG-GHHHHHHHHHTTSCTTSCEEEECSSS
T ss_pred --CCEEE-EEecHH-hHHHHHHHHHhhCCCCCEEEEecCCC
Confidence 89888 444332 3689999888653 356777788865
No 152
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=88.35 E-value=1.5 Score=42.65 Aligned_cols=98 Identities=10% Similarity=0.117 Sum_probs=55.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcC-CCCCHHHHHhc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHA-PIKSLLDAVKA 407 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~-~~~~L~e~v~~ 407 (464)
..||.|+|+|..|.++|..|..+ |.. ...+++++|+. .++ ..+. .+.+..- -..+..|+++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~-----G~~---~~~~V~v~~r~----~~~-~~~~----~l~~~G~~~~~~~~e~~~~ 84 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA-----GVL---AAHKIMASSPD----MDL-ATVS----ALRKMGVKLTPHNKETVQH 84 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----TTS-HHHH----HHHHHTCEEESCHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-----CCC---CcceEEEECCC----ccH-HHHH----HHHHcCCEEeCChHHHhcc
Confidence 45899999999999999988753 531 11368888764 110 0011 1111100 11356677765
Q ss_pred CCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 012398 408 IKPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 447 (464)
Q Consensus 408 vkptvLIG~S~~~g~ft~evv~~Ma~~~-erPIIFaLSNPt 447 (464)
+|++| ++..+ ...+++++.++..- +..+|.-++|..
T Consensus 85 --aDvVi-lav~~-~~~~~vl~~l~~~l~~~~ivvs~s~gi 121 (322)
T 2izz_A 85 --SDVLF-LAVKP-HIIPFILDEIGADIEDRHIVVSCAAGV 121 (322)
T ss_dssp --CSEEE-ECSCG-GGHHHHHHHHGGGCCTTCEEEECCTTC
T ss_pred --CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEeCCCC
Confidence 67665 33333 45666666665432 345666677765
No 153
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=88.34 E-value=3.4 Score=41.01 Aligned_cols=119 Identities=18% Similarity=0.153 Sum_probs=77.5
Q ss_pred CCCceeecCccch---hHHHHHHHHHHHH-------------------HhCCCCCcceEEEeCcchHHHHHHHHHHHHHH
Q 012398 296 SSHLVFNDDIQGT---ASVVLAGILSALK-------------------LVGGTLADQTFLFLGAGEAGTGIAELIALEMS 353 (464)
Q Consensus 296 ~~~~~FnDDiQGT---aaV~LAgll~Alk-------------------~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~ 353 (464)
..|.+.|---..+ |=-+++.+|+..| ..+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 90 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~--- 166 (333)
T 1dxy_A 90 YGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKG--- 166 (333)
T ss_dssp TTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHH---
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHH---
Confidence 4677777533333 4446788887765 13467899999999999999999998864
Q ss_pred HhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCCCcEEEeccC----CCCCCCHHHHH
Q 012398 354 KQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVE 429 (464)
Q Consensus 354 ~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~ft~evv~ 429 (464)
.|+ +++.+|+.. .. . .. .++. ..+|.|+++. .|+++=.-- ..+.|+++.++
T Consensus 167 --~G~-------~V~~~d~~~----~~-~-~~----~~~~----~~~l~ell~~--aDvV~~~~P~~~~t~~li~~~~l~ 221 (333)
T 1dxy_A 167 --FGA-------KVIAYDPYP----MK-G-DH----PDFD----YVSLEDLFKQ--SDVIDLHVPGIEQNTHIINEAAFN 221 (333)
T ss_dssp --TTC-------EEEEECSSC----CS-S-CC----TTCE----ECCHHHHHHH--CSEEEECCCCCGGGTTSBCHHHHH
T ss_pred --CCC-------EEEEECCCc----ch-h-hH----hccc----cCCHHHHHhc--CCEEEEcCCCchhHHHHhCHHHHh
Confidence 254 588888752 11 1 11 1111 1378888876 888874321 12478888888
Q ss_pred HHHcCCCCcEEEEcCC
Q 012398 430 AMASFNEKPVIFALSN 445 (464)
Q Consensus 430 ~Ma~~~erPIIFaLSN 445 (464)
.|. +..++.=.|.
T Consensus 222 ~mk---~ga~lIn~sr 234 (333)
T 1dxy_A 222 LMK---PGAIVINTAR 234 (333)
T ss_dssp HSC---TTEEEEECSC
T ss_pred hCC---CCcEEEECCC
Confidence 885 4567766664
No 154
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=88.26 E-value=1.3 Score=46.48 Aligned_cols=98 Identities=13% Similarity=0.164 Sum_probs=62.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhch-hhh-hhcCCCCCHHHHHhc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK-PWA-HEHAPIKSLLDAVKA 407 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~-~fa-~~~~~~~~L~e~v~~ 407 (464)
.+|.|+|+|..|.++|..|.+. |. +++++|+. .++ +....+ ... .......++.|+++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~----~~~---~~~l~~~~~~~~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRT----QSK---VDHFLANEAKGKSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----SHH---HHHHHHTTTTTSSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCC----HHH---HHHHHcccccCCCeEEeCCHHHHHhc
Confidence 4899999999999999998753 54 57777763 111 111111 000 011123589998876
Q ss_pred C-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 012398 408 I-KPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 447 (464)
Q Consensus 408 v-kptvLIG~S~~~g~ft~evv~~Ma~~~-erPIIFaLSNPt 447 (464)
. +||++| ++.+.+...+++++.+..+- +..||.-+||-.
T Consensus 72 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 72 LKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp SCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 4 488877 45545456788888887654 356888888854
No 155
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=88.10 E-value=1.1 Score=44.68 Aligned_cols=55 Identities=27% Similarity=0.312 Sum_probs=42.1
Q ss_pred hhHHHHHHHHHHHHH----------------hCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 012398 308 TASVVLAGILSALKL----------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVD 371 (464)
Q Consensus 308 TaaV~LAgll~Alk~----------------~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD 371 (464)
+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~-----~G~-------~V~~~d 170 (324)
T 3hg7_A 103 MSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKH-----FGM-------KVLGVS 170 (324)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEC
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHh-----CCC-------EEEEEc
Confidence 344567777776652 3568999999999999999999999864 264 688888
Q ss_pred ccC
Q 012398 372 SKG 374 (464)
Q Consensus 372 ~~G 374 (464)
+..
T Consensus 171 r~~ 173 (324)
T 3hg7_A 171 RSG 173 (324)
T ss_dssp SSC
T ss_pred CCh
Confidence 764
No 156
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=88.06 E-value=2.8 Score=40.71 Aligned_cols=91 Identities=14% Similarity=0.092 Sum_probs=50.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhch-hhhhh-cCCCCCHHHHHh
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK-PWAHE-HAPIKSLLDAVK 406 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~-~fa~~-~~~~~~L~e~v~ 406 (464)
..||.|+|+|..|.++|..|..+ |. ++++++|++- ++.+. .+.+. .....++.|+++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~~----------~~~~~~~~~~~g~~~~~~~~e~~~ 82 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAAS----------AESWRPRAEELGVSCKASVAEVAG 82 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSSC----------HHHHHHHHHHTTCEECSCHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCCC----------CHHHHHHHHHCCCEEeCCHHHHHh
Confidence 36899999999999999999764 52 3788888731 00011 11111 011246677776
Q ss_pred cCCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcC
Q 012398 407 AIKPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALS 444 (464)
Q Consensus 407 ~vkptvLIG~S~~~g~ft~evv~~Ma~~~-erPIIFaLS 444 (464)
. +|++| ++.++ ....++++.+.++. +..||.-+|
T Consensus 83 ~--aDvVi-~~vp~-~~~~~~~~~l~~~l~~~~ivvd~s 117 (312)
T 3qsg_A 83 E--CDVIF-SLVTA-QAALEVAQQAGPHLCEGALYADFT 117 (312)
T ss_dssp H--CSEEE-ECSCT-TTHHHHHHHHGGGCCTTCEEEECC
T ss_pred c--CCEEE-EecCc-hhHHHHHHhhHhhcCCCCEEEEcC
Confidence 5 66665 22222 23334555555433 445555555
No 157
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=87.94 E-value=0.79 Score=43.36 Aligned_cols=34 Identities=24% Similarity=0.232 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.||.|+|+|..|..+|..+... |. ..+++++|++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~ 40 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRD-----HP-----HYKIVGYNRS 40 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSS
T ss_pred ceEEEEeeCHHHHHHHHHHHhC-----CC-----CcEEEEEcCC
Confidence 5899999999999999988653 32 1368888864
No 158
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=87.94 E-value=0.29 Score=49.53 Aligned_cols=102 Identities=20% Similarity=0.207 Sum_probs=63.9
Q ss_pred CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCc-------cCCchhchhhhhh----
Q 012398 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRK-------ESLQHFKKPWAHE---- 394 (464)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~-------~~l~~~k~~fa~~---- 394 (464)
+|++.||+|+|||..|..+|+.|+.+ |+ .+|.++|.+=+=..+-. +++-..|..-|..
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~a-----GV------g~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~ 99 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKR 99 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHH
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHH
Confidence 57889999999999999999999874 64 68999998632211100 0111112111110
Q ss_pred -cCCC--------------------------CCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEE
Q 012398 395 -HAPI--------------------------KSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFA 442 (464)
Q Consensus 395 -~~~~--------------------------~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFa 442 (464)
.+.+ ..+.+.++. .|++|-++--. =++-.+-.++.....|+|-+
T Consensus 100 inP~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~--~DlVvd~tDn~--~tR~lin~~c~~~~~plI~a 170 (340)
T 3rui_A 100 IFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKE--HDIIFLLVDSR--ESRWLPSLLSNIENKTVINA 170 (340)
T ss_dssp HCTTCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHH--CSEEEECCSST--GGGHHHHHHHHHTTCEEEEE
T ss_pred hCCCCEEEEEeccccccCcccchhhhhcCCHHHHHhhhcc--CCEEEecCCCH--HHHHHHHHHHHHcCCcEEEe
Confidence 0110 124566665 88888776533 36777788887778887764
No 159
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=87.86 E-value=0.39 Score=46.89 Aligned_cols=110 Identities=15% Similarity=0.112 Sum_probs=65.7
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc---ccCCCccCCchhchhhhhhcCCCCCHHHHH
Q 012398 330 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL---IVSSRKESLQHFKKPWAHEHAPIKSLLDAV 405 (464)
Q Consensus 330 ~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL---l~~~r~~~l~~~k~~fa~~~~~~~~L~e~v 405 (464)
.||+|.|| |..|..++..|+. .|.--..-...++++|...- +..... ++.+...+|..+-....++.+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~~-dl~~~~~~~~~di~~~~~~~~a~ 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVVM-ELEDCAFPLLAGLEATDDPKVAF 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchhh-hhhcccccccCCeEeccChHHHh
Confidence 48999997 9999999988764 24310000137999997420 000000 11111112221211125688999
Q ss_pred hcCCCcEEEeccCCCCC--------------CCHHHHHHHHcCC-CCcEEEEcCCCC
Q 012398 406 KAIKPTMLMGTSGVGKT--------------FTKEVVEAMASFN-EKPVIFALSNPT 447 (464)
Q Consensus 406 ~~vkptvLIG~S~~~g~--------------ft~evv~~Ma~~~-erPIIFaLSNPt 447 (464)
++ +|++|=+.+.+.. .|.++++++.+++ .+.+++-.|||.
T Consensus 79 ~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 79 KD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 86 9999976665431 3567788898876 666778899996
No 160
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=87.85 E-value=0.24 Score=49.69 Aligned_cols=108 Identities=17% Similarity=0.225 Sum_probs=66.6
Q ss_pred CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcC--CCCCHHH
Q 012398 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHA--PIKSLLD 403 (464)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~--~~~~L~e 403 (464)
+....||.|+|||..|.++|..++. .|+ ...+.++|.+-=...+-.-+|.+. ..|..... ...+..
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~-----~~~-----~~el~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~~~d~~- 83 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILM-----KDL-----ADELALVDVIEDKLKGEMMDLQHG-SLFLKTPKIVSSKDYS- 83 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGCSCCEEEECSSGG-
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHh-----CCC-----CceEEEEeCChHHHHHHHHhhhhh-hhccCCCeEEEcCCHH-
Confidence 3456799999999999999998865 254 357999997410001000012211 12321100 123454
Q ss_pred HHhcCCCcEEEeccCC---CC-----C------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 404 AVKAIKPTMLMGTSGV---GK-----T------FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 404 ~v~~vkptvLIG~S~~---~g-----~------ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
++++ +|++|=+.+. +| + +-+++++.|+++++..+|+-.|||.
T Consensus 84 ~~~~--aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 139 (331)
T 4aj2_A 84 VTAN--SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPV 139 (331)
T ss_dssp GGTT--EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred HhCC--CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChH
Confidence 5776 9998744333 33 1 2357888999999999999999997
No 161
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=87.63 E-value=0.87 Score=42.39 Aligned_cols=36 Identities=17% Similarity=0.272 Sum_probs=27.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.||.|+|+|..|..+|..|... |.. ..++++++|++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~---~~~~V~~~~r~ 38 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIV---SSNQIICSDLN 38 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCC---CCCeEEEEeCC
Confidence 4899999999999999988763 531 12468888873
No 162
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=87.45 E-value=0.29 Score=44.04 Aligned_cols=94 Identities=15% Similarity=0.146 Sum_probs=58.6
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhh---h--hcCCCCCHHHH
Q 012398 331 TFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA---H--EHAPIKSLLDA 404 (464)
Q Consensus 331 riv~~G-AGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa---~--~~~~~~~L~e~ 404 (464)
||+|+| +|..|..+|+.+.+ .| .+++++|++ .++ ....++.+. . +.. ..++.++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~-----~g-------~~V~~~~r~----~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~ 61 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT-----LG-------HEIVVGSRR----EEK---AEAKAAEYRRIAGDASIT-GMKNEDA 61 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEESS----HHH---HHHHHHHHHHHHSSCCEE-EEEHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHH-----CC-------CEEEEEeCC----HHH---HHHHHHHhccccccCCCC-hhhHHHH
Confidence 799999 99999999998864 24 268888864 111 111111110 0 001 2478888
Q ss_pred HhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 012398 405 VKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTS 448 (464)
Q Consensus 405 v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSNPt~ 448 (464)
++. +|++|=+.. + ...+++++.+++..+..+|.-++|+.+
T Consensus 62 ~~~--~D~Vi~~~~-~-~~~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 62 AEA--CDIAVLTIP-W-EHAIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HHH--CSEEEECSC-H-HHHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred Hhc--CCEEEEeCC-h-hhHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 887 899884433 3 245677776654334678888999764
No 163
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=87.44 E-value=4.7 Score=40.15 Aligned_cols=39 Identities=15% Similarity=0.074 Sum_probs=31.7
Q ss_pred CCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 324 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 324 g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+..|.+.+|.|+|.|..|..+|+.+..+ .|+ +++.+|+.
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~----~G~-------~V~~~d~~ 196 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHG----LGM-------KLVYYDVA 196 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEECSS
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHh----cCC-------EEEEECCC
Confidence 5679999999999999999999988522 354 68888875
No 164
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=87.43 E-value=3.6 Score=40.55 Aligned_cols=64 Identities=23% Similarity=0.235 Sum_probs=45.3
Q ss_pred CCceeecCcc---chhHHHHHHHHHHHHH---------------------hCCCCCcceEEEeCcchHHHHHHHHHHHHH
Q 012398 297 SHLVFNDDIQ---GTASVVLAGILSALKL---------------------VGGTLADQTFLFLGAGEAGTGIAELIALEM 352 (464)
Q Consensus 297 ~~~~FnDDiQ---GTaaV~LAgll~Alk~---------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~a~ 352 (464)
.|.+.|---- .+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+..
T Consensus 90 gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~-- 167 (320)
T 1gdh_A 90 GIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQG-- 167 (320)
T ss_dssp TCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHT--
T ss_pred CcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHH--
Confidence 4555554322 3344467777777653 2457889999999999999999998863
Q ss_pred HHhcCCChhhhcCeEEEEcc
Q 012398 353 SKQTKAPIEEARKKIWLVDS 372 (464)
Q Consensus 353 ~~~~G~s~~eA~~~i~lvD~ 372 (464)
.|+ +++.+|+
T Consensus 168 ---~G~-------~V~~~d~ 177 (320)
T 1gdh_A 168 ---FDM-------DIDYFDT 177 (320)
T ss_dssp ---TTC-------EEEEECS
T ss_pred ---CCC-------EEEEECC
Confidence 253 6888887
No 165
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=87.28 E-value=4.7 Score=40.16 Aligned_cols=108 Identities=18% Similarity=0.162 Sum_probs=72.2
Q ss_pred hhHHHHHHHHHHHHH-------------------hCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEE
Q 012398 308 TASVVLAGILSALKL-------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIW 368 (464)
Q Consensus 308 TaaV~LAgll~Alk~-------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~ 368 (464)
+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+.. .|+ +++
T Consensus 101 vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~-----~G~-------~V~ 168 (334)
T 2pi1_A 101 VAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLA-----FGM-------KVL 168 (334)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHH-----TTC-------EEE
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHH-----CcC-------EEE
Confidence 444567777777652 3667999999999999999999998864 264 688
Q ss_pred EEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 012398 369 LVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 369 lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~ft~evv~~Ma~~~erPIIFaLS 444 (464)
.+|+.. . . . . +...-...+|.|+++. .|+++=.- ...+.|+++.++.|. +..|+.=.|
T Consensus 169 ~~d~~~----~--~-~--~----~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~a 230 (334)
T 2pi1_A 169 CYDVVK----R--E-D--L----KEKGCVYTSLDELLKE--SDVISLHVPYTKETHHMINEERISLMK---DGVYLINTA 230 (334)
T ss_dssp EECSSC----C--H-H--H----HHTTCEECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTEEEEECS
T ss_pred EECCCc----c--h-h--h----HhcCceecCHHHHHhh--CCEEEEeCCCChHHHHhhCHHHHhhCC---CCcEEEECC
Confidence 888742 1 0 0 0 0001112358888886 88887431 223578888888885 566777666
Q ss_pred C
Q 012398 445 N 445 (464)
Q Consensus 445 N 445 (464)
.
T Consensus 231 R 231 (334)
T 2pi1_A 231 R 231 (334)
T ss_dssp C
T ss_pred C
Confidence 4
No 166
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=87.03 E-value=0.63 Score=42.65 Aligned_cols=37 Identities=16% Similarity=0.251 Sum_probs=26.5
Q ss_pred CCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
..+...||.|+|+|..|.++|..+... | .+++++|++
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~ 51 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK 51 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC
Confidence 356678999999999999999988652 4 368888864
No 167
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=86.79 E-value=0.25 Score=49.78 Aligned_cols=106 Identities=11% Similarity=0.079 Sum_probs=65.7
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcC--CCCCHHHHH
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHA--PIKSLLDAV 405 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~--~~~~L~e~v 405 (464)
...||.|+|||..|.++|..++.. |+ ...+.++|.+-=..++-.-+|.+. ..|..... ...++++ +
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~-----g~-----~~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~t~d~~~-~ 87 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMK-----DL-----ADEVALVDVMEDKLKGEMMDLEHG-SLFLHTAKIVSGKDYSV-S 87 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHH-----CC-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSCCSEEEEESSSCS-C
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECCHHHHHHHHHHhhhh-hhcccCCeEEEcCCHHH-h
Confidence 347999999999999999988753 55 247999997311000000012211 12322100 1135554 6
Q ss_pred hcCCCcEEE---eccCCCC-----C------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 406 KAIKPTMLM---GTSGVGK-----T------FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 406 ~~vkptvLI---G~S~~~g-----~------ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
++ +|++| |....+| + +-+++++.+.++++..+|+-.|||.
T Consensus 88 ~d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPv 141 (330)
T 3ldh_A 88 AG--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELG 141 (330)
T ss_dssp SS--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred CC--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCcc
Confidence 66 99988 3333333 1 2367788899999999999999997
No 168
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=86.67 E-value=3.7 Score=41.03 Aligned_cols=119 Identities=14% Similarity=0.070 Sum_probs=69.8
Q ss_pred CCceeecCc---cchhHHHHHHHHHHHHH------------------hCCCCCcceEEEeCcchHHHHHHHHHHHHHHHh
Q 012398 297 SHLVFNDDI---QGTASVVLAGILSALKL------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQ 355 (464)
Q Consensus 297 ~~~~FnDDi---QGTaaV~LAgll~Alk~------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~ 355 (464)
.|++.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 112 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~----- 186 (335)
T 2g76_A 112 GILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQS----- 186 (335)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHT-----
T ss_pred CeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHH-----
Confidence 456666432 23444567777777663 3567999999999999999999998853
Q ss_pred cCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhh-cCCCCCHHHHHhcCCCcEEEeccC----CCCCCCHHHHHH
Q 012398 356 TKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-HAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVEA 430 (464)
Q Consensus 356 ~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~-~~~~~~L~e~v~~vkptvLIG~S~----~~g~ft~evv~~ 430 (464)
.|+ +++.+|+.. . .. .+.. .-...+|.|+++. .|+++=.-- ..+.|+++.++.
T Consensus 187 ~G~-------~V~~~d~~~----~------~~---~~~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 244 (335)
T 2g76_A 187 FGM-------KTIGYDPII----S------PE---VSASFGVQQLPLEEIWPL--CDFITVHTPLLPSTTGLLNDNTFAQ 244 (335)
T ss_dssp TTC-------EEEEECSSS----C------HH---HHHHTTCEECCHHHHGGG--CSEEEECCCCCTTTTTSBCHHHHTT
T ss_pred CCC-------EEEEECCCc----c------hh---hhhhcCceeCCHHHHHhc--CCEEEEecCCCHHHHHhhCHHHHhh
Confidence 253 588888642 1 00 0110 0001356666665 666663311 123566666666
Q ss_pred HHcCCCCcEEEEcCC
Q 012398 431 MASFNEKPVIFALSN 445 (464)
Q Consensus 431 Ma~~~erPIIFaLSN 445 (464)
|. +..++.=.|.
T Consensus 245 mk---~gailIN~ar 256 (335)
T 2g76_A 245 CK---KGVRVVNCAR 256 (335)
T ss_dssp SC---TTEEEEECSC
T ss_pred CC---CCcEEEECCC
Confidence 64 4555555554
No 169
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=86.26 E-value=0.69 Score=38.01 Aligned_cols=33 Identities=21% Similarity=0.352 Sum_probs=25.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+.+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~-----~g-------~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE-----KG-------HDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 3589999999999999998864 24 368888873
No 170
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=86.22 E-value=1.9 Score=37.44 Aligned_cols=97 Identities=13% Similarity=0.101 Sum_probs=59.2
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHHHhc
Q 012398 330 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKA 407 (464)
Q Consensus 330 ~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~ 407 (464)
.+|+|.|| |-.|..+++.|++ .| .++++++++.- ....+......+.. +..+..++.++++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~-----~g-------~~V~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 67 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQ-----AG-------YEVTVLVRDSS----RLPSEGPRPAHVVVGDVLQAADVDKTVAG 67 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCGG----GSCSSSCCCSEEEESCTTSHHHHHHHHTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHH-----CC-------CeEEEEEeChh----hcccccCCceEEEEecCCCHHHHHHHHcC
Confidence 68999998 8888888888865 24 36888877521 10111011111111 11122357788876
Q ss_pred CCCcEEEeccCCCCC---------CCHHHHHHHHcCCCCcEEEEcC
Q 012398 408 IKPTMLMGTSGVGKT---------FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 408 vkptvLIG~S~~~g~---------ft~evv~~Ma~~~erPIIFaLS 444 (464)
+|++|=+.+.... .+..+++.|.+..-+.|||.=|
T Consensus 68 --~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss 111 (206)
T 1hdo_A 68 --QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (206)
T ss_dssp --CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred --CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence 8999987765431 2577888887766667888544
No 171
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=86.18 E-value=3.6 Score=42.19 Aligned_cols=38 Identities=16% Similarity=0.162 Sum_probs=31.2
Q ss_pred CCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 324 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 324 g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.
T Consensus 186 ~~~l~gktvGIIGlG~IG~~vA~~l~a-----~G~-------~V~~~d~~ 223 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRIGLAVLRRLAP-----FDV-------HLHYTDRH 223 (393)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSS
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHh-----CCC-------EEEEEcCC
Confidence 567999999999999999999998753 253 58888864
No 172
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=86.01 E-value=2.6 Score=43.48 Aligned_cols=82 Identities=22% Similarity=0.346 Sum_probs=53.2
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhc
Q 012398 329 DQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKA 407 (464)
Q Consensus 329 d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~ 407 (464)
--||+|+|+ |-+|.+.++.+.. .|.. ..++..+|.+= ..+.. +| +.++.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~-----lGa~----~~~V~v~D~~~---~~~g~-------~~-----------~~i~~ 263 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHK-----VGIP----DANILKWDIKE---TSRGG-------PF-----------DEIPQ 263 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHH-----TTCC----GGGEEEECHHH---HTTCS-------CC-----------THHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHh-----CCCC----cCceEEeeccc---cccCC-------ch-----------hhHhh
Confidence 568999999 9999999998865 3531 11466666641 01100 01 23554
Q ss_pred CCCcEEEeccCC----CCCCCHHHHHHHHcCCCCcEEEEcC
Q 012398 408 IKPTMLMGTSGV----GKTFTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 408 vkptvLIG~S~~----~g~ft~evv~~Ma~~~erPIIFaLS 444 (464)
.|++||+--. |-++|+|+|+.|.+ +--+|.=+|
T Consensus 264 --aDivIn~vlig~~aP~Lvt~e~v~~m~k--~gsVIVDVA 300 (394)
T 2qrj_A 264 --ADIFINCIYLSKPIAPFTNMEKLNNPNR--RLRTVVDVS 300 (394)
T ss_dssp --SSEEEECCCCCSSCCCSCCHHHHCCTTC--CCCEEEETT
T ss_pred --CCEEEECcCcCCCCCcccCHHHHhcCcC--CCeEEEEEe
Confidence 8999998754 56899999999931 444565554
No 173
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=85.92 E-value=3.7 Score=41.29 Aligned_cols=94 Identities=16% Similarity=0.111 Sum_probs=61.8
Q ss_pred CCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHH
Q 012398 324 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLD 403 (464)
Q Consensus 324 g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e 403 (464)
|..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. + .... .......+|.|
T Consensus 155 ~~~l~g~tvGIIGlG~IG~~vA~~l~~-----~G~-------~V~~~d~~~--~~---~---~~~~---~g~~~~~~l~e 211 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKIGQLVAGYGRA-----FGM-------NVLVWGREN--SK---E---RARA---DGFAVAESKDA 211 (352)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSHH--HH---H---HHHH---TTCEECSSHHH
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHh-----CCC-------EEEEECCCC--CH---H---HHHh---cCceEeCCHHH
Confidence 567899999999999999999998864 364 688888642 00 0 0000 00011247888
Q ss_pred HHhcCCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 012398 404 AVKAIKPTMLMGTS----GVGKTFTKEVVEAMASFNEKPVIFALSN 445 (464)
Q Consensus 404 ~v~~vkptvLIG~S----~~~g~ft~evv~~Ma~~~erPIIFaLSN 445 (464)
+++. .|+++=.- ...+.|+++.++.|. +..++.=.|+
T Consensus 212 ll~~--aDiV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aR 252 (352)
T 3gg9_A 212 LFEQ--SDVLSVHLRLNDETRSIITVADLTRMK---PTALFVNTSR 252 (352)
T ss_dssp HHHH--CSEEEECCCCSTTTTTCBCHHHHTTSC---TTCEEEECSC
T ss_pred HHhh--CCEEEEeccCcHHHHHhhCHHHHhhCC---CCcEEEECCC
Confidence 8887 88877432 123578888888885 5667776665
No 174
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=85.84 E-value=1.4 Score=45.85 Aligned_cols=97 Identities=16% Similarity=0.174 Sum_probs=59.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhh-----hhcCCCCCHHHHH
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA-----HEHAPIKSLLDAV 405 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa-----~~~~~~~~L~e~v 405 (464)
||.|+|+|..|..+|..|.. .|. +++++|+.. ++ .....+.+- .......++.|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~-----~G~-------~V~v~dr~~----~~---~~~l~~~~g~~~~~~~i~~~~~~~e~v 63 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAE-----KGF-------KVAVFNRTY----SK---SEEFMKANASAPFAGNLKAFETMEAFA 63 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSH----HH---HHHHHHHTTTSTTGGGEEECSCHHHHH
T ss_pred EEEEEChHHHHHHHHHHHHH-----CCC-------EEEEEeCCH----HH---HHHHHHhcCCCCCCCCeEEECCHHHHH
Confidence 79999999999999998865 353 477887631 11 111111000 0011235788988
Q ss_pred hcC-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 012398 406 KAI-KPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 447 (464)
Q Consensus 406 ~~v-kptvLIG~S~~~g~ft~evv~~Ma~~~-erPIIFaLSNPt 447 (464)
+.. ++|++| ++.+.+...+++++.+...- +..||.-+||-.
T Consensus 64 ~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 64 ASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp HHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred hcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 743 488887 44444445677887776433 456778888864
No 175
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=85.83 E-value=0.58 Score=43.02 Aligned_cols=93 Identities=15% Similarity=0.172 Sum_probs=49.7
Q ss_pred CCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHh
Q 012398 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVK 406 (464)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~ 406 (464)
-...||.|+|+|..|..+|+.+.. .|. +++++|++- ++ .. .++...-...++.++++
T Consensus 26 ~~~~~I~iiG~G~~G~~la~~l~~-----~g~-------~V~~~~r~~----~~---~~----~~~~~g~~~~~~~~~~~ 82 (215)
T 2vns_A 26 DEAPKVGILGSGDFARSLATRLVG-----SGF-------KVVVGSRNP----KR---TA----RLFPSAAQVTFQEEAVS 82 (215)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSH----HH---HH----HHSBTTSEEEEHHHHTT
T ss_pred CCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----HH---HH----HHHHcCCceecHHHHHh
Confidence 345689999999999999998864 253 577787641 11 11 11110000125667776
Q ss_pred cCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 407 AIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 407 ~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
. +|++|=+ ..+. ..+++++ ++...+..+|.-+||+.
T Consensus 83 ~--~DvVi~a-v~~~-~~~~v~~-l~~~~~~~~vv~~s~g~ 118 (215)
T 2vns_A 83 S--PEVIFVA-VFRE-HYSSLCS-LSDQLAGKILVDVSNPT 118 (215)
T ss_dssp S--CSEEEEC-SCGG-GSGGGGG-GHHHHTTCEEEECCCCC
T ss_pred C--CCEEEEC-CChH-HHHHHHH-HHHhcCCCEEEEeCCCc
Confidence 4 7777632 2232 2334443 22222455677777765
No 176
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=85.59 E-value=0.76 Score=43.84 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.||.|+|+|..|.++|..+... |. +++++|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 5899999999999999998753 53 67877764
No 177
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=85.59 E-value=2.2 Score=41.05 Aligned_cols=93 Identities=19% Similarity=0.247 Sum_probs=51.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhh-----------hhc-CC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA-----------HEH-AP 397 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa-----------~~~-~~ 397 (464)
.||.|+|+|..|..+|..|.. .| .+++++|++.= + +...++... ... ..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~-----~g-------~~V~~~~r~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLAL-----KG-------QSVLAWDIDAQ----R---IKEIQDRGAIIAEGPGLAGTAHPDLL 65 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSCHH----H---HHHHHHHTSEEEESSSCCEEECCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeCCHH----H---HHHHHhcCCeEEecccccccccccee
Confidence 589999999999999998864 24 25788887410 0 111100000 000 01
Q ss_pred CCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCC
Q 012398 398 IKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSN 445 (464)
Q Consensus 398 ~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~-erPIIFaLSN 445 (464)
..++.++++. +|++|= +.+. ...+++++.++++. +..+|+.+.|
T Consensus 66 ~~~~~~~~~~--~D~vi~-~v~~-~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 66 TSDIGLAVKD--ADVILI-VVPA-IHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp ESCHHHHHTT--CSEEEE-CSCG-GGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred cCCHHHHHhc--CCEEEE-eCCc-hHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 2467777764 777663 3222 23477777776532 3445555544
No 178
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=85.55 E-value=6.4 Score=38.84 Aligned_cols=104 Identities=22% Similarity=0.288 Sum_probs=59.4
Q ss_pred CccchhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccC
Q 012398 304 DIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKES 383 (464)
Q Consensus 304 DiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~ 383 (464)
+.++.....++..+.|++..+.+ .+++|+|+|||+.|...+.+... .|. ++++.+|+.
T Consensus 159 ~~~aal~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~---------- 216 (370)
T 4ej6_A 159 PVHGAFCEPLACCLHGVDLSGIK-AGSTVAILGGGVIGLLTVQLARL-----AGA------TTVILSTRQ---------- 216 (370)
T ss_dssp TTGGGGHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC----------
T ss_pred HHHHhhhhHHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----------
Confidence 34554455666667777665544 46799999999888776665543 363 478877753
Q ss_pred Cchhchhhhhhc-------CCCCCHHHHHhc---C---CCcEEEeccCCCCCCCHHHHHHHH
Q 012398 384 LQHFKKPWAHEH-------APIKSLLDAVKA---I---KPTMLMGTSGVGKTFTKEVVEAMA 432 (464)
Q Consensus 384 l~~~k~~fa~~~-------~~~~~L~e~v~~---v---kptvLIG~S~~~g~ft~evv~~Ma 432 (464)
+.+..+++.. ....++.+.++. . ++|++|=+++.+ ..-++.++.++
T Consensus 217 --~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~~-~~~~~~~~~l~ 275 (370)
T 4ej6_A 217 --ATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVA-ETVKQSTRLAK 275 (370)
T ss_dssp --HHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSCCH-HHHHHHHHHEE
T ss_pred --HHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCCCH-HHHHHHHHHhc
Confidence 1222333320 112356666654 1 578888766533 23345555554
No 179
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=85.53 E-value=2.2 Score=42.30 Aligned_cols=66 Identities=15% Similarity=0.094 Sum_probs=47.3
Q ss_pred CCCceeecCc----cchhHHHHHHHHHHHHH----------------hCCCCCcceEEEeCcchHHHHHHHHHHHHHHHh
Q 012398 296 SSHLVFNDDI----QGTASVVLAGILSALKL----------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQ 355 (464)
Q Consensus 296 ~~~~~FnDDi----QGTaaV~LAgll~Alk~----------------~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~ 355 (464)
..+++.|--- +..|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 86 ~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~----- 160 (315)
T 3pp8_A 86 ASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQA----- 160 (315)
T ss_dssp TTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHT-----
T ss_pred CCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHH-----
Confidence 4666665321 34555678888887763 2567899999999999999999998854
Q ss_pred cCCChhhhcCeEEEEccc
Q 012398 356 TKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 356 ~G~s~~eA~~~i~lvD~~ 373 (464)
.|+ +++.+|+.
T Consensus 161 ~G~-------~V~~~dr~ 171 (315)
T 3pp8_A 161 WGF-------PLRCWSRS 171 (315)
T ss_dssp TTC-------CEEEEESS
T ss_pred CCC-------EEEEEcCC
Confidence 364 57778864
No 180
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=85.39 E-value=0.26 Score=43.49 Aligned_cols=37 Identities=22% Similarity=0.290 Sum_probs=28.4
Q ss_pred CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
++.+.+|+|+|+|..|..+|+.|... .| .+++++|++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~----~g-------~~V~vid~~ 72 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRAR----YG-------KISLGIEIR 72 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHH----HC-------SCEEEEESC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhc----cC-------CeEEEEECC
Confidence 35577999999999999999988642 04 258888874
No 181
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=85.33 E-value=0.72 Score=44.94 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=27.7
Q ss_pred CCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
....||.|+|+|..|.++|..+... |. +++++|+.
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 63 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRT 63 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred cCCCEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 3557999999999999999998753 53 57777763
No 182
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=85.33 E-value=0.99 Score=43.72 Aligned_cols=48 Identities=8% Similarity=0.141 Sum_probs=36.2
Q ss_pred HHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 314 Agll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.|+..+++-.|.. .+.+++|+|||.+|-+++..|.. .|. ++|+++++.
T Consensus 105 ~G~~~~l~~~~~~-~~~~vlvlGaGgaarav~~~L~~-----~G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKN-----SGF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TTSCEEEECSSTTHHHHHHHHHH-----TTC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 5666677665554 56899999999999999888764 353 578888873
No 183
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=85.29 E-value=1.3 Score=41.97 Aligned_cols=90 Identities=13% Similarity=0.188 Sum_probs=50.3
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcC
Q 012398 330 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI 408 (464)
Q Consensus 330 ~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~v 408 (464)
.||.|+|+ |..|..+|..|.. .|. +++++|++- + .+... ....-...++.++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-----~g~-------~V~~~~r~~----~---~~~~~----~~~g~~~~~~~~~~~~- 67 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-----SAH-------HLAAIEIAP----E---GRDRL----QGMGIPLTDGDGWIDE- 67 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----SSS-------EEEEECCSH----H---HHHHH----HHTTCCCCCSSGGGGT-
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCC-------EEEEEECCH----H---HHHHH----HhcCCCcCCHHHHhcC-
Confidence 48999999 9999999998865 352 688888631 1 11111 1000011245555654
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCC
Q 012398 409 KPTMLMGTSGVGKTFTKEVVEAMASF-NEKPVIFALSNP 446 (464)
Q Consensus 409 kptvLIG~S~~~g~ft~evv~~Ma~~-~erPIIFaLSNP 446 (464)
+|++| ++.++.. .+++++.+.+. .+..||.-+|+.
T Consensus 68 -aDvVi-~av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~ 103 (286)
T 3c24_A 68 -ADVVV-LALPDNI-IEKVAEDIVPRVRPGTIVLILDAA 103 (286)
T ss_dssp -CSEEE-ECSCHHH-HHHHHHHHGGGSCTTCEEEESCSH
T ss_pred -CCEEE-EcCCchH-HHHHHHHHHHhCCCCCEEEECCCC
Confidence 67666 3332322 46666666543 234455556663
No 184
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=85.18 E-value=1.3 Score=45.66 Aligned_cols=97 Identities=18% Similarity=0.296 Sum_probs=50.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChh-hhcCeEEEEcccC-------cccCCCcc--CCchhchhhhhhcCCCC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIE-EARKKIWLVDSKG-------LIVSSRKE--SLQHFKKPWAHEHAPIK 399 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~-eA~~~i~lvD~~G-------Ll~~~r~~--~l~~~k~~fa~~~~~~~ 399 (464)
.||.|+|||+=|+++|..|.+.... .+.- +-.=++|..|..= .|...|.. .|+..+.+ ..-....
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~---~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp--~~i~~t~ 109 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKG---YPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLP--DNLVANP 109 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH---CTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCC--SSEEEES
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCC---ccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCC--CCcEEeC
Confidence 3999999999999999999875321 1000 0012577655431 01122110 12211110 0000125
Q ss_pred CHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCC
Q 012398 400 SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFN 435 (464)
Q Consensus 400 ~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~ 435 (464)
+|.+++++ +|++| +.. |-.|-+++++.+..+-
T Consensus 110 dl~~al~~--ad~ii-~av-Ps~~~r~~l~~l~~~~ 141 (391)
T 4fgw_A 110 DLIDSVKD--VDIIV-FNI-PHQFLPRICSQLKGHV 141 (391)
T ss_dssp CHHHHHTT--CSEEE-ECS-CGGGHHHHHHHHTTTS
T ss_pred CHHHHHhc--CCEEE-EEC-ChhhhHHHHHHhcccc
Confidence 78888887 77765 222 2256777777776543
No 185
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=85.07 E-value=1.3 Score=42.52 Aligned_cols=90 Identities=13% Similarity=0.162 Sum_probs=50.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhc-CCCCCHHHHHhcC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH-APIKSLLDAVKAI 408 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~-~~~~~L~e~v~~v 408 (464)
.||.|+|+|..|..+|..+.. .|. +++++|++ .++ +.. ++... ....++.|+++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~-----~g~-------~V~~~~~~----~~~---~~~----~~~~g~~~~~~~~~~~~~- 86 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLK-----MGH-------TVTVWNRT----AEK---CDL----FIQEGARLGRTPAEVVST- 86 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS----GGG---GHH----HHHTTCEECSCHHHHHHH-
T ss_pred CeEEEEcccHHHHHHHHHHHh-----CCC-------EEEEEeCC----HHH---HHH----HHHcCCEEcCCHHHHHhc-
Confidence 689999999999999998864 253 57788763 111 111 11110 112467777765
Q ss_pred CCcEEEeccCCCCCCCHHHHHHH----HcCCCCcEEEEcCC
Q 012398 409 KPTMLMGTSGVGKTFTKEVVEAM----ASFNEKPVIFALSN 445 (464)
Q Consensus 409 kptvLIG~S~~~g~ft~evv~~M----a~~~erPIIFaLSN 445 (464)
+|++|=+ .+...-.++++... ....+..+|+-+||
T Consensus 87 -~DvVi~a-v~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~ 125 (316)
T 2uyy_A 87 -CDITFAC-VSDPKAAKDLVLGPSGVLQGIRPGKCYVDMST 125 (316)
T ss_dssp -CSEEEEC-CSSHHHHHHHHHSTTCGGGGCCTTCEEEECSC
T ss_pred -CCEEEEe-CCCHHHHHHHHcCchhHhhcCCCCCEEEECCC
Confidence 7777632 22112344444432 11234556666776
No 186
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=85.06 E-value=1 Score=44.16 Aligned_cols=35 Identities=20% Similarity=0.443 Sum_probs=27.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
..||||+|+|.||+.+|..|.+. |- .-+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~-----~~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DP-----SIEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----Cc-----CCeEEEEeCC
Confidence 46899999999999999998653 32 1368889875
No 187
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=85.05 E-value=0.31 Score=45.91 Aligned_cols=32 Identities=19% Similarity=0.335 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.||.|+|+|..|..+|..|... | .+++++|++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----G-------NDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEECC
Confidence 4899999999999999988652 4 368888874
No 188
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=85.03 E-value=1.1 Score=42.50 Aligned_cols=90 Identities=14% Similarity=0.159 Sum_probs=50.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhh-cCCCCCHHHHHhcC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-HAPIKSLLDAVKAI 408 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~-~~~~~~L~e~v~~v 408 (464)
.||.|+|+|..|.++|..+... |. +++++|++ .++ .. .++.. .....++.|+++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~----~~~---~~----~~~~~g~~~~~~~~~~~~~- 57 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----GC-------SVTIWNRS----PEK---AE----ELAALGAERAATPCEVVES- 57 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS----GGG---GH----HHHHTTCEECSSHHHHHHH-
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----CC-------eEEEEcCC----HHH---HH----HHHHCCCeecCCHHHHHhc-
Confidence 5899999999999999988753 53 57777763 111 11 11111 1123577787776
Q ss_pred CCcEEEeccCCCCCCCHHHH---HHHHcC-CCCcEEEEcCC
Q 012398 409 KPTMLMGTSGVGKTFTKEVV---EAMASF-NEKPVIFALSN 445 (464)
Q Consensus 409 kptvLIG~S~~~g~ft~evv---~~Ma~~-~erPIIFaLSN 445 (464)
+|++| ++.+...-.++++ +.+.+. .+..+|.-+|+
T Consensus 58 -aDvvi-~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~st 96 (287)
T 3pef_A 58 -CPVTF-AMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMST 96 (287)
T ss_dssp -CSEEE-ECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred -CCEEE-EEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCCC
Confidence 77766 3322122334444 333222 24456666664
No 189
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=85.03 E-value=0.38 Score=48.17 Aligned_cols=109 Identities=17% Similarity=0.144 Sum_probs=67.8
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHHhcCCC-hhhhcCeEEEEcccC---cccCCCccCCchhchhhhhhcCCCCCHHHH
Q 012398 330 QTFLFLG-AGEAGTGIAELIALEMSKQTKAP-IEEARKKIWLVDSKG---LIVSSRKESLQHFKKPWAHEHAPIKSLLDA 404 (464)
Q Consensus 330 ~riv~~G-AGsAg~GiA~ll~~a~~~~~G~s-~~eA~~~i~lvD~~G---Ll~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 404 (464)
.||+|.| ||..|..+|.+|+. .|+- +++- -.+.++|.+. .+..... +|.+...+|.++.....++.++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~-----~~~~~e~~~-~~l~L~Di~~~~~~~~g~a~-DL~~~~~~~~~~~~~~~~~~~~ 76 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGN-----GSVFGKDQP-IILVLLDITPMMGVLDGVLM-ELQDCALPLLKDVIATDKEEIA 76 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHT-----TTTTCTTCC-EEEEEECCGGGHHHHHHHHH-HHHHTCCTTEEEEEEESCHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CCCccccCC-CEEEEEeCCCccccchhhHh-hhHhhhhcccCCEEEcCCcHHH
Confidence 5899999 79999999988864 3441 1111 1389999853 1111111 1322222333221222578899
Q ss_pred HhcCCCcEEEeccCCC---C-----------CCCHHHHHHHHcCCCCcE-EEEcCCCC
Q 012398 405 VKAIKPTMLMGTSGVG---K-----------TFTKEVVEAMASFNEKPV-IFALSNPT 447 (464)
Q Consensus 405 v~~vkptvLIG~S~~~---g-----------~ft~evv~~Ma~~~erPI-IFaLSNPt 447 (464)
+++ .|++|=+.+.+ | ...+++++.+.+++.+-+ |+-.|||.
T Consensus 77 ~~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPv 132 (333)
T 5mdh_A 77 FKD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPA 132 (333)
T ss_dssp TTT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCch
Confidence 997 99988554433 2 135788889999888874 88899996
No 190
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=84.78 E-value=1.2 Score=43.20 Aligned_cols=36 Identities=14% Similarity=0.233 Sum_probs=28.2
Q ss_pred CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.+...||.|+|+|..|.++|..|... |. +++++|++
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 41 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS 41 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 34567999999999999999998753 53 57777763
No 191
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=84.59 E-value=1.5 Score=42.33 Aligned_cols=95 Identities=14% Similarity=0.067 Sum_probs=52.5
Q ss_pred CCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhh-cCCCCCHHH
Q 012398 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-HAPIKSLLD 403 (464)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~-~~~~~~L~e 403 (464)
.+.+-.||.|+|+|..|.++|..|... |. +++++|++ .++ .. .++.. .....++.|
T Consensus 17 ~~~~m~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~----~~~---~~----~l~~~g~~~~~~~~~ 73 (310)
T 3doj_A 17 RGSHMMEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT----LSK---CD----ELVEHGASVCESPAE 73 (310)
T ss_dssp -CCCSCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS----GGG---GH----HHHHTTCEECSSHHH
T ss_pred ccccCCEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC----HHH---HH----HHHHCCCeEcCCHHH
Confidence 344457999999999999999998763 53 67778773 111 11 11111 112356777
Q ss_pred HHhcCCCcEEEeccCCCCCCCHHHH---HHHHc-CCCCcEEEEcCC
Q 012398 404 AVKAIKPTMLMGTSGVGKTFTKEVV---EAMAS-FNEKPVIFALSN 445 (464)
Q Consensus 404 ~v~~vkptvLIG~S~~~g~ft~evv---~~Ma~-~~erPIIFaLSN 445 (464)
+++. +|++|= +.+...-.++++ +.+.+ ..+..+|.-+|+
T Consensus 74 ~~~~--aDvvi~-~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st 116 (310)
T 3doj_A 74 VIKK--CKYTIA-MLSDPCAALSVVFDKGGVLEQICEGKGYIDMST 116 (310)
T ss_dssp HHHH--CSEEEE-CCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSC
T ss_pred HHHh--CCEEEE-EcCCHHHHHHHHhCchhhhhccCCCCEEEECCC
Confidence 7776 777663 221112233444 33322 234456666664
No 192
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=84.40 E-value=2.3 Score=44.03 Aligned_cols=98 Identities=14% Similarity=0.152 Sum_probs=61.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHHHhcC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAI 408 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~v 408 (464)
.||.|+|+|..|..+|..|.. .|. +++++|+. .+ ......+.+.. ......++.|+++..
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~-----~G~-------~V~v~dr~----~~---~~~~l~~~~~~~gi~~~~s~~e~v~~l 66 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVES-----RGY-------TVAIYNRT----TS---KTEEVFKEHQDKNLVFTKTLEEFVGSL 66 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS----HH---HHHHHHHHTTTSCEEECSSHHHHHHTB
T ss_pred CcEEEEeeHHHHHHHHHHHHh-----CCC-------EEEEEcCC----HH---HHHHHHHhCcCCCeEEeCCHHHHHhhc
Confidence 589999999999999998875 353 47777763 11 11111111100 011235788888753
Q ss_pred -CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 012398 409 -KPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 447 (464)
Q Consensus 409 -kptvLIG~S~~~g~ft~evv~~Ma~~~-erPIIFaLSNPt 447 (464)
++|++| ++.+.+...+++++.+...- +..||.-+||-.
T Consensus 67 ~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 67 EKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp CSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred cCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 588877 45444456778888776543 356777888854
No 193
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=84.38 E-value=0.95 Score=44.89 Aligned_cols=103 Identities=22% Similarity=0.292 Sum_probs=65.4
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCC--CCCHHHHHhc
Q 012398 331 TFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAP--IKSLLDAVKA 407 (464)
Q Consensus 331 riv~~G-AGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~--~~~L~e~v~~ 407 (464)
||.|+| +|..|..+|-+|... .++ ...+.++|.+-. ..+..-+|.+. ++-..-.. ..+..+++++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~-----~~el~L~Di~~~-~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~~~~ 69 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPS-----GSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGEDATPALEG 69 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCT-----TEEEEEECSSTT-HHHHHHHHHTS--CSSEEEEEECSSCCHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCC-----CceEEEEecCCC-chhHHHHhhCC--CCCceEEEecCCCcHHHhCC
Confidence 899999 799999999887542 233 257999999741 11111012211 11000000 0256788887
Q ss_pred CCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 012398 408 IKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPT 447 (464)
Q Consensus 408 vkptvLIG~S~~~---g~-----------ft~evv~~Ma~~~erPIIFaLSNPt 447 (464)
+|++|=+.+.+ |- +-+++++.+++++++.+|+-.|||.
T Consensus 70 --aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 121 (312)
T 3hhp_A 70 --ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPV 121 (312)
T ss_dssp --CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred --CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcc
Confidence 99988555443 31 2357778888999999999999997
No 194
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=84.16 E-value=5.8 Score=39.76 Aligned_cols=66 Identities=21% Similarity=0.242 Sum_probs=45.9
Q ss_pred CCCceeecCc---cchhHHHHHHHHHHHHHh------------------------C-CCCCcceEEEeCcchHHHHHHHH
Q 012398 296 SSHLVFNDDI---QGTASVVLAGILSALKLV------------------------G-GTLADQTFLFLGAGEAGTGIAEL 347 (464)
Q Consensus 296 ~~~~~FnDDi---QGTaaV~LAgll~Alk~~------------------------g-~~l~d~riv~~GAGsAg~GiA~l 347 (464)
..|.+.|--- ..+|=-+++.+|+..|-. | ..|.+.+|.|+|.|..|..+|+.
T Consensus 107 ~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~ 186 (347)
T 1mx3_A 107 LGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALR 186 (347)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCCCCEEEEEeECHHHHHHHHH
Confidence 3566665432 234445677777776621 2 47889999999999999999998
Q ss_pred HHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 348 IALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 348 l~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+.. .|+ +++.+|++
T Consensus 187 l~~-----~G~-------~V~~~d~~ 200 (347)
T 1mx3_A 187 AKA-----FGF-------NVLFYDPY 200 (347)
T ss_dssp HHT-----TTC-------EEEEECTT
T ss_pred HHH-----CCC-------EEEEECCC
Confidence 864 354 58888864
No 195
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=84.15 E-value=2.3 Score=44.76 Aligned_cols=98 Identities=13% Similarity=0.154 Sum_probs=63.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcC--CCCCHHHHHhc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHA--PIKSLLDAVKA 407 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~--~~~~L~e~v~~ 407 (464)
.+|.|+|+|..|.++|..|... |. +++++|+. .+ ......+.-+.... ...++.|+++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~----~~---~~~~l~~~g~~g~~i~~~~s~~e~v~~ 65 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRT----VS---KVDDFLANEAKGTKVVGAQSLKEMVSK 65 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----TH---HHHHHHHTTTTTSSCEECSSHHHHHHT
T ss_pred CEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCC----HH---HHHHHHhcccCCCceeccCCHHHHHhh
Confidence 5899999999999999988763 53 57777763 11 11111111111101 13689999985
Q ss_pred C-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 012398 408 I-KPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 447 (464)
Q Consensus 408 v-kptvLIG~S~~~g~ft~evv~~Ma~~~-erPIIFaLSNPt 447 (464)
+ +||++| ++.+++...+++++.+..+- +..||.-+||-.
T Consensus 66 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 66 LKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp BCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 4 588877 45445556778888887643 567888888754
No 196
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=84.03 E-value=0.71 Score=46.35 Aligned_cols=103 Identities=17% Similarity=0.226 Sum_probs=63.0
Q ss_pred CCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCC-------ccCCchhchhhhhh---
Q 012398 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSR-------KESLQHFKKPWAHE--- 394 (464)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r-------~~~l~~~k~~fa~~--- 394 (464)
++|++.||+|+|+|..|..+|+.|+.+ |+ .+|.++|.+=+=..+- .+++-..|..-+.+
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~a-----Gv------g~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~ 182 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATS-----GI------GEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELL 182 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHH
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHH
Confidence 467889999999999999999999875 64 6899999863211110 01111112111111
Q ss_pred --cCC---------CC--C-HHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEE
Q 012398 395 --HAP---------IK--S-LLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFA 442 (464)
Q Consensus 395 --~~~---------~~--~-L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFa 442 (464)
.+. +. + +.+ ++ +.|++|-++.-. .-+...|...+.....|.|.+
T Consensus 183 ~~np~v~v~~~~~~i~~~~~~~~-~~--~~DlVvd~~Dn~-~~~r~~ln~~c~~~~~p~i~~ 240 (353)
T 3h5n_A 183 KRNSEISVSEIALNINDYTDLHK-VP--EADIWVVSADHP-FNLINWVNKYCVRANQPYINA 240 (353)
T ss_dssp HHCTTSEEEEEECCCCSGGGGGG-SC--CCSEEEECCCCS-TTHHHHHHHHHHHTTCCEEEE
T ss_pred HHCCCCeEEEeecccCchhhhhH-hc--cCCEEEEecCCh-HHHHHHHHHHHHHhCCCEEEE
Confidence 111 11 1 445 55 489998765321 116777878887778999864
No 197
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=83.87 E-value=2.3 Score=39.93 Aligned_cols=34 Identities=26% Similarity=0.326 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.||.|+|+|..|..+|..+.. .|.. .+++++|++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~-----~g~~-----~~V~~~d~~ 35 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR-----SGFK-----GKIYGYDIN 35 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-----TTCC-----SEEEEECSC
T ss_pred cEEEEEecCHHHHHHHHHHHh-----cCCC-----cEEEEEeCC
Confidence 379999999999999998865 3531 368888874
No 198
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=83.83 E-value=0.8 Score=39.29 Aligned_cols=34 Identities=6% Similarity=0.114 Sum_probs=27.2
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
...+|+|+|+|..|..+++.|.. .| .++.++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~-----~g-------~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQ-----RG-------QNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 35689999999999999998865 24 368888874
No 199
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=83.82 E-value=0.92 Score=44.27 Aligned_cols=100 Identities=17% Similarity=0.206 Sum_probs=59.4
Q ss_pred HHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh
Q 012398 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 393 (464)
Q Consensus 314 Agll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~ 393 (464)
.|++.+|+-.| +.+++|+|||.||.+++..|.+. | .+|+++++. .++.+.+. .+.-
T Consensus 107 ~Gf~~~L~~~~----~k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt----~~ka~~la----~~~~ 162 (269)
T 3phh_A 107 LGFYLSLKQKN----YQNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS----SRGLDFFQ----RLGC 162 (269)
T ss_dssp HHHHHHCC-------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----CTTHHHHH----HHTC
T ss_pred HHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC----HHHHHHHH----HCCC
Confidence 45666665433 88999999999999999888653 4 478888874 33322121 1110
Q ss_pred hcCCCCCHHHHHhcCCCcEEEeccCCC----CCCCHHHHH-HHHcCCCCcEEEEcC-CC
Q 012398 394 EHAPIKSLLDAVKAIKPTMLMGTSGVG----KTFTKEVVE-AMASFNEKPVIFALS-NP 446 (464)
Q Consensus 394 ~~~~~~~L~e~v~~vkptvLIG~S~~~----g~ft~evv~-~Ma~~~erPIIFaLS-NP 446 (464)
......++ . ++|++|-++..+ ..+.++.+. .+. +..+|+=++ ||
T Consensus 163 ~~~~~~~l----~--~~DiVInaTp~Gm~~~~~l~~~~l~~~l~---~~~~v~D~vY~P 212 (269)
T 3phh_A 163 DCFMEPPK----S--AFDLIINATSASLHNELPLNKEVLKGYFK---EGKLAYDLAYGF 212 (269)
T ss_dssp EEESSCCS----S--CCSEEEECCTTCCCCSCSSCHHHHHHHHH---HCSEEEESCCSS
T ss_pred eEecHHHh----c--cCCEEEEcccCCCCCCCCCChHHHHhhCC---CCCEEEEeCCCC
Confidence 00011222 1 599999766543 147888665 454 466887664 45
No 200
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=83.39 E-value=1.5 Score=41.71 Aligned_cols=32 Identities=22% Similarity=0.293 Sum_probs=25.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.||.|+|+|..|.++|..+... |. +++++|++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----GF-------DVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 3799999999999999998764 53 57777764
No 201
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=83.25 E-value=1.6 Score=41.85 Aligned_cols=32 Identities=31% Similarity=0.503 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999998753 53 68888874
No 202
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=83.20 E-value=3.5 Score=40.99 Aligned_cols=121 Identities=13% Similarity=0.078 Sum_probs=75.0
Q ss_pred CCceeecCc---cchhHHHHHHHHHHHHH--------------------hCCCCCcceEEEeCcchHHHHHHHHHHHHHH
Q 012398 297 SHLVFNDDI---QGTASVVLAGILSALKL--------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMS 353 (464)
Q Consensus 297 ~~~~FnDDi---QGTaaV~LAgll~Alk~--------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~ 353 (464)
.|++.|--- +.+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+..
T Consensus 90 gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~--- 166 (330)
T 4e5n_A 90 GVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQG--- 166 (330)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTT---
T ss_pred CcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHH---
Confidence 455555322 23445567777776652 2456889999999999999999998753
Q ss_pred HhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCCCcEEEecc----CCCCCCCHHHHH
Q 012398 354 KQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVE 429 (464)
Q Consensus 354 ~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~ft~evv~ 429 (464)
.|+ +++.+|+... . ....+ .+ .-...+|.|+++. .|+++=.- ...+.++++.++
T Consensus 167 --~G~-------~V~~~d~~~~----~---~~~~~-~~---g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~ 224 (330)
T 4e5n_A 167 --WGA-------TLQYHEAKAL----D---TQTEQ-RL---GLRQVACSELFAS--SDFILLALPLNADTLHLVNAELLA 224 (330)
T ss_dssp --SCC-------EEEEECSSCC----C---HHHHH-HH---TEEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHT
T ss_pred --CCC-------EEEEECCCCC----c---HhHHH-hc---CceeCCHHHHHhh--CCEEEEcCCCCHHHHHHhCHHHHh
Confidence 354 5888887531 0 00010 11 0012368888876 78777432 123578888888
Q ss_pred HHHcCCCCcEEEEcCC
Q 012398 430 AMASFNEKPVIFALSN 445 (464)
Q Consensus 430 ~Ma~~~erPIIFaLSN 445 (464)
.|. +..+|.=.|+
T Consensus 225 ~mk---~gailIN~ar 237 (330)
T 4e5n_A 225 LVR---PGALLVNPCR 237 (330)
T ss_dssp TSC---TTEEEEECSC
T ss_pred hCC---CCcEEEECCC
Confidence 884 5667776665
No 203
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=83.16 E-value=3.9 Score=39.99 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=28.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
-.||.|+|+|..|.++|..+..+ |. ..+++++|++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~-----G~-----~~~V~~~dr~ 67 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS-----GF-----KGKIYGYDIN 67 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT-----TC-----CSEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-----CC-----CCEEEEEECC
Confidence 37999999999999999988753 64 1478888875
No 204
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=82.94 E-value=0.55 Score=46.51 Aligned_cols=33 Identities=27% Similarity=0.335 Sum_probs=26.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
-.||.|+|+|..|.+||..+..+ |. +++++|.+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~ 38 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 36899999999999999998763 64 57888864
No 205
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=82.85 E-value=1.5 Score=42.94 Aligned_cols=33 Identities=30% Similarity=0.386 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.||.|+|+|..|.++|..+... |. .+++++|++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999988753 51 368888875
No 206
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=82.79 E-value=0.88 Score=45.57 Aligned_cols=102 Identities=15% Similarity=0.087 Sum_probs=60.6
Q ss_pred CCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCC-c-------cCCchhchhhh----
Q 012398 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSR-K-------ESLQHFKKPWA---- 392 (464)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r-~-------~~l~~~k~~fa---- 392 (464)
++|++.+|+|+|+|..|..||+.|+.+ |+ ++|.++|.+= |.... . +++-..|..-+
T Consensus 32 ~~L~~~~VlivG~GGlG~~ia~~La~~-----Gv------g~itlvD~d~-V~~sNL~rq~~~~~~diG~~Ka~~~~~~l 99 (346)
T 1y8q_A 32 KRLRASRVLLVGLKGLGAEIAKNLILA-----GV------KGLTMLDHEQ-VTPEDPGAQFLIRTGSVGRNRAEASLERA 99 (346)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB-CCSSCGGGCTTSCSSCTTSBHHHHHHHHH
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEECCC-cchhhCCCCCccccccCcCCHHHHHHHHH
Confidence 367788999999999999999999875 64 6899999752 22111 0 01111111111
Q ss_pred hhc-CC---------C-CCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEE
Q 012398 393 HEH-AP---------I-KSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFA 442 (464)
Q Consensus 393 ~~~-~~---------~-~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFa 442 (464)
+.. +. + ....+.++. .|++|.+... .=+...|-.++.....|.|.+
T Consensus 100 ~~lnp~v~v~~~~~~~~~~~~~~~~~--~dvVv~~~d~--~~~r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 100 QNLNPMVDVKVDTEDIEKKPESFFTQ--FDAVCLTCCS--RDVIVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp HHTCTTSEEEEECSCGGGCCHHHHTT--CSEEEEESCC--HHHHHHHHHHHHHTTCEEEEE
T ss_pred HhHCCCeEEEEEecccCcchHHHhcC--CCEEEEcCCC--HHHHHHHHHHHHHcCCCEEEE
Confidence 111 11 0 123555664 8888876542 234555666666667888865
No 207
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=82.74 E-value=6 Score=39.48 Aligned_cols=95 Identities=18% Similarity=0.340 Sum_probs=52.6
Q ss_pred HHHHHHHHHhC-CCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhh
Q 012398 314 AGILSALKLVG-GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA 392 (464)
Q Consensus 314 Agll~Alk~~g-~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa 392 (464)
+..+.|+.... .--.+++|+|+|||+.|...+.+... .|. ++++.+|+. +.+..++
T Consensus 198 ~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~------------~~~~~~~ 254 (404)
T 3ip1_A 198 SVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKH-----AGA------SKVILSEPS------------EVRRNLA 254 (404)
T ss_dssp HHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC------------HHHHHHH
T ss_pred HHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC------------HHHHHHH
Confidence 33344444333 33457899999999888776665543 363 478877752 1222333
Q ss_pred hhc-------CCCCCHHHHHhc----CCCcEEEeccCCCCCCCHHHHHHH
Q 012398 393 HEH-------APIKSLLDAVKA----IKPTMLMGTSGVGKTFTKEVVEAM 431 (464)
Q Consensus 393 ~~~-------~~~~~L~e~v~~----vkptvLIG~S~~~g~ft~evv~~M 431 (464)
+.. ....++.+.|+. -++|++|-+++.+....+..++.+
T Consensus 255 ~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l 304 (404)
T 3ip1_A 255 KELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVI 304 (404)
T ss_dssp HHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHH
T ss_pred HHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHH
Confidence 220 111355555543 368999987764322344555555
No 208
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=82.59 E-value=0.71 Score=50.29 Aligned_cols=102 Identities=22% Similarity=0.225 Sum_probs=63.6
Q ss_pred CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCC--C-----ccCCchhchhhhhh----
Q 012398 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSS--R-----KESLQHFKKPWAHE---- 394 (464)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~--r-----~~~l~~~k~~fa~~---- 394 (464)
+|++.||+|+|||..|..+|+.|+.+ |+ .+|.++|.+=+=..+ | .+++-..|..-|..
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~a-----GV------G~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~ 391 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKR 391 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHH
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHh
Confidence 67889999999999999999999875 64 689999987431111 0 01111112111110
Q ss_pred -cCC---------C-----------------CCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEE
Q 012398 395 -HAP---------I-----------------KSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFA 442 (464)
Q Consensus 395 -~~~---------~-----------------~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFa 442 (464)
.+. + .++.+.++. .|++|-++.-. =+...+-.++.....|+|-+
T Consensus 392 iNP~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~--~DlVvd~tDn~--~tR~~ln~~c~~~~~PlI~a 462 (615)
T 4gsl_A 392 IFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKE--HDIIFLLVDSR--ESRWLPSLLSNIENKTVINA 462 (615)
T ss_dssp HCTTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHH--CSEEEECCSSG--GGTHHHHHHHHHTTCEEEEE
T ss_pred hCCCcEEEEeeccccccCccccchhhhcCCHHHHHHHhhc--CCEEEecCCCH--HHHHHHHHHHHHcCCeEEEE
Confidence 010 0 124556665 88888776532 35667777887778888764
No 209
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=82.55 E-value=2.3 Score=38.43 Aligned_cols=100 Identities=11% Similarity=0.054 Sum_probs=59.4
Q ss_pred CCCCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhch-hhhh-hcCCCCCH
Q 012398 325 GTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK-PWAH-EHAPIKSL 401 (464)
Q Consensus 325 ~~l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~-~fa~-~~~~~~~L 401 (464)
.++++.+|+|.|| |-.|..+++.|++ .| -++++++++. ++.+.+..... .+.. +-. .++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~R~~----~~~~~~~~~~~~~~~~~Dl~--~~~ 78 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKN-----KG-------HEPVAMVRNE----EQGPELRERGASDIVVANLE--EDF 78 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSG----GGHHHHHHTTCSEEEECCTT--SCC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHh-----CC-------CeEEEEECCh----HHHHHHHhCCCceEEEcccH--HHH
Confidence 4678899999998 8899999988875 35 2688887741 11111111111 1111 111 456
Q ss_pred HHHHhcCCCcEEEeccCCCCC------------CCHHHHHHHHcCCCCcEEEEcC
Q 012398 402 LDAVKAIKPTMLMGTSGVGKT------------FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 402 ~e~v~~vkptvLIG~S~~~g~------------ft~evv~~Ma~~~erPIIFaLS 444 (464)
.+++++ +|++|=+.+.... -+..+++.+.+..-+-|||.=|
T Consensus 79 ~~~~~~--~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 79 SHAFAS--IDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp GGGGTT--CSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHcC--CCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 777775 9999977765421 1456788887766677888555
No 210
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=82.38 E-value=0.63 Score=50.53 Aligned_cols=38 Identities=26% Similarity=0.404 Sum_probs=33.2
Q ss_pred CCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.+|++.||+|+|||..|..+|+.|+.+ |+ .+|.++|.+
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 478889999999999999999999864 64 689999976
No 211
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=82.37 E-value=1.9 Score=40.56 Aligned_cols=21 Identities=29% Similarity=0.379 Sum_probs=18.8
Q ss_pred ceEEEeCcchHHHHHHHHHHH
Q 012398 330 QTFLFLGAGEAGTGIAELIAL 350 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~ 350 (464)
.||.|+|+|..|..+|..|..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~ 24 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLAR 24 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHh
Confidence 489999999999999998864
No 212
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=82.33 E-value=8.6 Score=38.26 Aligned_cols=89 Identities=18% Similarity=0.174 Sum_probs=58.7
Q ss_pred CCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHH
Q 012398 324 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLD 403 (464)
Q Consensus 324 g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e 403 (464)
+..|.+.++.|+|.|..|..+|+.+... |+ +++..|+. .+ + ...... ....+|.|
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~f-----g~-------~v~~~d~~-----~~-~---~~~~~~----~~~~~l~e 190 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVV-----KR-E---DLKEKG----CVYTSLDE 190 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS-----CC-H---HHHHTT----CEECCHHH
T ss_pred cceecCcEEEEECcchHHHHHHHhhccc-----Cc-------eeeecCCc-----cc-h---hhhhcC----ceecCHHH
Confidence 4678899999999999999999988543 64 57777753 11 1 111111 11257888
Q ss_pred HHhcCCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEE
Q 012398 404 AVKAIKPTMLMGTS----GVGKTFTKEVVEAMASFNEKPVIFA 442 (464)
Q Consensus 404 ~v~~vkptvLIG~S----~~~g~ft~evv~~Ma~~~erPIIFa 442 (464)
.++. .|+++=.- ..-+.|+++.++.|. +..++.=
T Consensus 191 ll~~--sDivslh~Plt~~T~~li~~~~l~~mk---~~a~lIN 228 (334)
T 3kb6_A 191 LLKE--SDVISLHVPYTKETHHMINEERISLMK---DGVYLIN 228 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTEEEEE
T ss_pred HHhh--CCEEEEcCCCChhhccCcCHHHHhhcC---CCeEEEe
Confidence 8887 88877331 223588889998884 4556553
No 213
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=82.30 E-value=2.6 Score=43.70 Aligned_cols=98 Identities=12% Similarity=0.129 Sum_probs=60.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhch-hhh-hhcCCCCCHHHHHhc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK-PWA-HEHAPIKSLLDAVKA 407 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~-~fa-~~~~~~~~L~e~v~~ 407 (464)
.||.|+|+|..|..+|..|.. .|. +++++|+. .++ +....+ ... .......++.|+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~-----~G~-------~V~v~dr~----~~~---~~~l~~~~~~g~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMND-----HGF-------VVCAFNRT----VSK---VDDFLANEAKGTKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS----THH---HHHHHHTTTTTSSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHH-----CCC-------eEEEEeCC----HHH---HHHHHhccccCCCeEEeCCHHHHHhh
Confidence 479999999999999998865 353 47778763 111 111111 000 000113578998863
Q ss_pred C-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 012398 408 I-KPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 447 (464)
Q Consensus 408 v-kptvLIG~S~~~g~ft~evv~~Ma~~~-erPIIFaLSNPt 447 (464)
+ ++|++| ++.+.+...+++++.+..+- +..||+-+||-.
T Consensus 64 l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 64 LKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp BCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 2 489887 45544446778887776543 356888888865
No 214
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=82.20 E-value=2.4 Score=39.72 Aligned_cols=31 Identities=16% Similarity=0.138 Sum_probs=25.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
||.|+|+|..|..+|..+.. .|. +++++|++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRR-----RGH-------YLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 79999999999999998865 242 68888874
No 215
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=82.13 E-value=1.2 Score=42.78 Aligned_cols=32 Identities=22% Similarity=0.268 Sum_probs=25.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
-||+|+|||.||+..|-.|.. .|+ ++.++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 489999999999999998865 475 46677653
No 216
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=82.10 E-value=3.7 Score=39.00 Aligned_cols=105 Identities=11% Similarity=0.096 Sum_probs=62.4
Q ss_pred CCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchh----chhhhh-hcCCCCC
Q 012398 327 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF----KKPWAH-EHAPIKS 400 (464)
Q Consensus 327 l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~----k~~fa~-~~~~~~~ 400 (464)
.+..||+|.|| |-.|..+++.|++. |- .-+++.+|+...-.. ...+... ...+.. +..+..+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g~-----~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~ 89 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQS-----YE-----TYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNGEL 89 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHH-----CT-----TEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhh-----CC-----CcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCHHH
Confidence 45679999999 99999999988763 52 236777777532111 1111110 111111 1112235
Q ss_pred HHHHHhcCCCcEEEeccCCCCCC----------------CHHHHHHHHcCCCCcEEEEc
Q 012398 401 LLDAVKAIKPTMLMGTSGVGKTF----------------TKEVVEAMASFNEKPVIFAL 443 (464)
Q Consensus 401 L~e~v~~vkptvLIG~S~~~g~f----------------t~evv~~Ma~~~erPIIFaL 443 (464)
+.++++..++|++|=+.+....- |..+++.+.+..-+-+||.=
T Consensus 90 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~S 148 (346)
T 4egb_A 90 LEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVS 148 (346)
T ss_dssp HHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEE
T ss_pred HHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 78888888899999877654211 36678888877666688853
No 217
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=81.73 E-value=1.3 Score=41.99 Aligned_cols=92 Identities=13% Similarity=0.186 Sum_probs=51.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhh-cCCCCCHHHHHhcC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-HAPIKSLLDAVKAI 408 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~-~~~~~~L~e~v~~v 408 (464)
.||.|+|+|..|..+|..+.. .|. +++++|++. ++ .. .+++. .....++.|+++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~~~~----~~---~~----~~~~~g~~~~~~~~~~~~~- 60 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLK-----EGV-------TVYAFDLME----AN---VA----AVVAQGAQACENNQKVAAA- 60 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHH-----TTC-------EEEEECSSH----HH---HH----HHHTTTCEECSSHHHHHHH-
T ss_pred CEEEEECccHHHHHHHHHHHH-----CCC-------eEEEEeCCH----HH---HH----HHHHCCCeecCCHHHHHhC-
Confidence 589999999999999998864 243 577777631 11 11 11111 0112467777775
Q ss_pred CCcEEEeccCCCCCCCHHHHH---HHHc-CCCCcEEEEcCCCC
Q 012398 409 KPTMLMGTSGVGKTFTKEVVE---AMAS-FNEKPVIFALSNPT 447 (464)
Q Consensus 409 kptvLIG~S~~~g~ft~evv~---~Ma~-~~erPIIFaLSNPt 447 (464)
+|++|=+. +...-.++++. .+.+ ..+..+|+-+||-.
T Consensus 61 -~D~vi~~v-p~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~ 101 (301)
T 3cky_A 61 -SDIIFTSL-PNAGIVETVMNGPGGVLSACKAGTVIVDMSSVS 101 (301)
T ss_dssp -CSEEEECC-SSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCC
T ss_pred -CCEEEEEC-CCHHHHHHHHcCcchHhhcCCCCCEEEECCCCC
Confidence 78777332 22123445553 2222 23455777777643
No 218
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=81.56 E-value=4.1 Score=40.79 Aligned_cols=97 Identities=21% Similarity=0.345 Sum_probs=72.7
Q ss_pred chhHHHHHHHHHHHHHhCCCCCcceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCc
Q 012398 307 GTASVVLAGILSALKLVGGTLADQTFLFLGAG-EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ 385 (464)
Q Consensus 307 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAG-sAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~ 385 (464)
+-.-+|-.|++--|+-.+.+|+..++||+|.+ -.|.-+|-||.. .|. .+.+|.|+
T Consensus 157 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~-----~~A-------TVTi~Hs~------------ 212 (303)
T 4b4u_A 157 AYGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQ-----ANA-------TVTICHSR------------ 212 (303)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT------------
T ss_pred cccCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHh-----cCC-------EEEEecCC------------
Confidence 34457888999999999999999999999975 467778877754 242 35555432
Q ss_pred hhchhhhhhcCCCCCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC-CCC
Q 012398 386 HFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS-NPT 447 (464)
Q Consensus 386 ~~k~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLS-NPt 447 (464)
..+|.+.++. +|++|...+.++.++.|||+ +..+|.=.. |+.
T Consensus 213 ------------T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk------~GavVIDVGin~~ 255 (303)
T 4b4u_A 213 ------------TQNLPELVKQ--ADIIVGAVGKAELIQKDWIK------QGAVVVDAGFHPR 255 (303)
T ss_dssp ------------CSSHHHHHHT--CSEEEECSCSTTCBCGGGSC------TTCEEEECCCBCC
T ss_pred ------------CCCHHHHhhc--CCeEEeccCCCCcccccccc------CCCEEEEeceecC
Confidence 1358888887 99999999999999999997 455665433 544
No 219
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=81.01 E-value=0.99 Score=44.09 Aligned_cols=102 Identities=11% Similarity=0.110 Sum_probs=59.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchh--chhhhhhcCCCCCHHHHHh
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF--KKPWAHEHAPIKSLLDAVK 406 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~--k~~fa~~~~~~~~L~e~v~ 406 (464)
..||.|+|+|+.|..+|..|..+ | .++.++|+.--+..-+...+... ...+........++.+ ++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~-----g-------~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~ 69 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA-----G-------EAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LG 69 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT-----T-------CCEEEECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----C-------CEEEEEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cC
Confidence 46899999999999999988753 4 25788887311100000001000 0000000001146666 44
Q ss_pred cCCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 012398 407 AIKPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 447 (464)
Q Consensus 407 ~vkptvLIG~S~~~g~ft~evv~~Ma~~~-erPIIFaLSNPt 447 (464)
. +|++| ++... ...+++++.++... +..+|..++|..
T Consensus 70 ~--~D~Vi-lavk~-~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 70 E--QDVVI-VAVKA-PALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp C--CSEEE-ECCCH-HHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred C--CCEEE-EeCCc-hhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 4 89887 44444 46778888887643 567888899984
No 220
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=80.54 E-value=3.6 Score=38.16 Aligned_cols=20 Identities=25% Similarity=0.378 Sum_probs=18.3
Q ss_pred eEEEeCcchHHHHHHHHHHH
Q 012398 331 TFLFLGAGEAGTGIAELIAL 350 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~ 350 (464)
||.|+|+|..|..+|..|..
T Consensus 2 ~I~iIG~G~mG~~la~~l~~ 21 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRS 21 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHH
T ss_pred eEEEEechHHHHHHHHHHHH
Confidence 79999999999999998865
No 221
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=80.42 E-value=4.5 Score=38.89 Aligned_cols=32 Identities=19% Similarity=0.339 Sum_probs=25.7
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~G-AGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.||.|+| +|..|..+|..+.. .|. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~-----~G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRA-----SGY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHT-----TTC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 4899999 99999999998864 353 57888864
No 222
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=80.32 E-value=0.62 Score=46.19 Aligned_cols=89 Identities=20% Similarity=0.309 Sum_probs=53.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh----hcCCCCCHHHHH
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH----EHAPIKSLLDAV 405 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~----~~~~~~~L~e~v 405 (464)
.||+|+|||-.|-.+|+.|.+ ..++.+.|... ..+... ++++. +..+..+|.+++
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~-------~~~~~~-~~~~~~~~~d~~d~~~l~~~~ 75 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN-------ENLEKV-KEFATPLKVDASNFDKLVEVM 75 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH-------HHHHHH-TTTSEEEECCTTCHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH-------HHHHHH-hccCCcEEEecCCHHHHHHHH
Confidence 379999999999888877632 13577777531 112111 11221 112224688888
Q ss_pred hcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 012398 406 KAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 445 (464)
Q Consensus 406 ~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN 445 (464)
++ .|++|-+ .|+-+...++++-.+.. .. +|=+|-
T Consensus 76 ~~--~DvVi~~--~p~~~~~~v~~~~~~~g-~~-yvD~s~ 109 (365)
T 3abi_A 76 KE--FELVIGA--LPGFLGFKSIKAAIKSK-VD-MVDVSF 109 (365)
T ss_dssp TT--CSEEEEC--CCGGGHHHHHHHHHHHT-CE-EEECCC
T ss_pred hC--CCEEEEe--cCCcccchHHHHHHhcC-cc-eEeeec
Confidence 86 8999854 44457888888776543 33 445653
No 223
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=80.14 E-value=4.3 Score=37.45 Aligned_cols=36 Identities=25% Similarity=0.296 Sum_probs=28.0
Q ss_pred CCCcceEEEeCc-ch-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 326 TLADQTFLFLGA-GE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 326 ~l~d~riv~~GA-Gs-Ag~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.+++++++|.|| |+ .|.++|+.+++ .|. +++++|++
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~-----~G~-------~V~~~~r~ 56 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALL-----EGA-------DVVISDYH 56 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHH-----CCC-------EEEEecCC
Confidence 478899999999 74 88888888865 353 58888874
No 224
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=80.07 E-value=1.8 Score=45.32 Aligned_cols=32 Identities=22% Similarity=0.403 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.||.|+|+|..|.+||..+..+ |. +++++|.+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a-----G~-------~V~l~D~~ 86 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA-----GI-------ETFLVVRN 86 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECc
Confidence 6899999999999999988763 54 57777763
No 225
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=79.84 E-value=1.3 Score=41.85 Aligned_cols=32 Identities=16% Similarity=0.244 Sum_probs=25.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.||.|+|+|..|..+|..+.. .|. +++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLK-----AGY-------SLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-----TTC-------EEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 489999999999999998864 242 57888763
No 226
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=79.49 E-value=1.4 Score=42.64 Aligned_cols=100 Identities=12% Similarity=0.144 Sum_probs=54.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhc--hhhh-hhcCCCCCHHHHHh
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFK--KPWA-HEHAPIKSLLDAVK 406 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k--~~fa-~~~~~~~~L~e~v~ 406 (464)
.||.|+|||+-|..+|..|..+ | .+++++|+.-+ ..=+...+.-.. ..+. ++..-..++.+ ++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~-~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~ 68 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-----G-------EDVHFLLRRDY-EAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IG 68 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-----S-------CCEEEECSTTH-HHHHHTCEEEEETTCCEEESCCCEESCHHH-HC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEEcCcH-HHHHhCCCEEEcCCCeEEEeeceeecCHHH-cC
Confidence 5899999999999999988653 4 35888887531 000000010000 0000 00000134444 44
Q ss_pred cCCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 012398 407 AIKPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 447 (464)
Q Consensus 407 ~vkptvLIG~S~~~g~ft~evv~~Ma~~~-erPIIFaLSNPt 447 (464)
.+|++| ++..+ ...+++++.++.+- +..+|..+.|-.
T Consensus 69 --~~D~vi-lavk~-~~~~~~l~~l~~~l~~~~~iv~l~nGi 106 (312)
T 3hn2_A 69 --PMDLVL-VGLKT-FANSRYEELIRPLVEEGTQILTLQNGL 106 (312)
T ss_dssp --CCSEEE-ECCCG-GGGGGHHHHHGGGCCTTCEEEECCSSS
T ss_pred --CCCEEE-EecCC-CCcHHHHHHHHhhcCCCCEEEEecCCC
Confidence 377776 55544 34667888877543 456777788865
No 227
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=79.47 E-value=1.5 Score=39.24 Aligned_cols=96 Identities=16% Similarity=0.103 Sum_probs=58.2
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchh-----chhhhh-hcCCCCCHH
Q 012398 330 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF-----KKPWAH-EHAPIKSLL 402 (464)
Q Consensus 330 ~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~-----k~~fa~-~~~~~~~L~ 402 (464)
.+|+|.|| |-.|..+++.|++. .|. ++++++++. + ..+... +..+.. +-.+..++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~----~g~-------~V~~~~r~~----~--~~~~~~~~~~~~~~~~~~D~~d~~~~~ 68 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTY----TDM-------HITLYGRQL----K--TRIPPEIIDHERVTVIEGSFQNPGXLE 68 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHH----CCC-------EEEEEESSH----H--HHSCHHHHTSTTEEEEECCTTCHHHHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhc----CCc-------eEEEEecCc----c--ccchhhccCCCceEEEECCCCCHHHHH
Confidence 35999996 88888888888731 353 688877741 1 012111 001111 111123577
Q ss_pred HHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 012398 403 DAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 403 e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLS 444 (464)
+++++ +|++|=+.+..+.-++.+++.|.+..-+-|||.=|
T Consensus 69 ~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs 108 (221)
T 3r6d_A 69 QAVTN--AEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSM 108 (221)
T ss_dssp HHHTT--CSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHcC--CCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEEee
Confidence 78875 89999777643322788999998766667887533
No 228
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=79.13 E-value=1.8 Score=40.56 Aligned_cols=34 Identities=12% Similarity=0.326 Sum_probs=28.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
..+|+|+|||.||+..|..|.. .|+ ++.++|+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 4689999999999999998865 354 588999874
No 229
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=79.07 E-value=1.6 Score=41.57 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=28.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
..+|+|+|||.||+..|..|.+ .|. .++.++|++.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 4689999999999999998864 353 2699999874
No 230
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=78.75 E-value=2.8 Score=37.36 Aligned_cols=96 Identities=7% Similarity=0.115 Sum_probs=58.1
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHHHhc
Q 012398 330 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKA 407 (464)
Q Consensus 330 ~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~ 407 (464)
.||+|.|| |-.|..+++.|++ .| .++++++++. .+...+.. ...+.. +-.+..++.+++++
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~ 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHP----EKIKIENE-HLKVKKADVSSLDEVCEVCKG 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCG----GGCCCCCT-TEEEECCCTTCHHHHHHHHTT
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCc----ccchhccC-ceEEEEecCCCHHHHHHHhcC
Confidence 58999996 8888888887764 24 3788888852 11111211 111111 11122357788885
Q ss_pred CCCcEEEeccCCCC----------CCCHHHHHHHHcCCCCcEEEEcC
Q 012398 408 IKPTMLMGTSGVGK----------TFTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 408 vkptvLIG~S~~~g----------~ft~evv~~Ma~~~erPIIFaLS 444 (464)
+|++|=+.+... ..+..+++.|.+..-+.+||.=|
T Consensus 68 --~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 68 --ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp --CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred --CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 999997765431 12567888888876667888433
No 231
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=78.51 E-value=0.86 Score=38.77 Aligned_cols=32 Identities=16% Similarity=0.379 Sum_probs=26.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.+|+|+|+|..|..+|+.|.. .|. +++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~-----~g~-------~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLA-----SDI-------PLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 478999999999999998865 353 68888874
No 232
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=78.32 E-value=0.87 Score=41.41 Aligned_cols=96 Identities=14% Similarity=0.109 Sum_probs=52.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchh-chhhhh-hcCCCCCHHHH-Hhc
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF-KKPWAH-EHAPIKSLLDA-VKA 407 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~-k~~fa~-~~~~~~~L~e~-v~~ 407 (464)
||+|+|+|..|..+|+.|.. .| .+++++|++ .++-+.+... ...+.. +......|.++ ++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~-----~g-------~~v~vid~~----~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~- 64 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLS-----RK-------YGVVIINKD----RELCEEFAKKLKATIIHGDGSHKEILRDAEVS- 64 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHH-----TT-------CCEEEEESC----HHHHHHHHHHSSSEEEESCTTSHHHHHHHTCC-
T ss_pred EEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC----HHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcc-
Confidence 79999999999999998865 24 368888863 1110101110 000111 11111235554 44
Q ss_pred CCCcEEEeccCCCCCCCHHHHHHHHc-CCCCcEEEEcCCC
Q 012398 408 IKPTMLMGTSGVGKTFTKEVVEAMAS-FNEKPVIFALSNP 446 (464)
Q Consensus 408 vkptvLIG~S~~~g~ft~evv~~Ma~-~~erPIIFaLSNP 446 (464)
++|++|-+.... .....+..+++ .+..+-|++.+|-
T Consensus 65 -~ad~vi~~~~~d--~~n~~~~~~a~~~~~~~~iia~~~~ 101 (218)
T 3l4b_C 65 -KNDVVVILTPRD--EVNLFIAQLVMKDFGVKRVVSLVND 101 (218)
T ss_dssp -TTCEEEECCSCH--HHHHHHHHHHHHTSCCCEEEECCCS
T ss_pred -cCCEEEEecCCc--HHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 599999666533 23334445554 3566667776653
No 233
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=78.12 E-value=1.6 Score=40.55 Aligned_cols=95 Identities=14% Similarity=0.154 Sum_probs=56.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHHHhc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKA 407 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~ 407 (464)
..||+|.|||-.|..+++.|++ .|. +++.++++. +.+.+. ..+.. +-.+..++.+++++
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~-----~g~-------~V~~~~r~~-------~~~~~~-~~~~~~Dl~d~~~~~~~~~~ 62 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTA-----QGH-------EVTGLRRSA-------QPMPAG-VQTLIADVTRPDTLASIVHL 62 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECTT-------SCCCTT-CCEEECCTTCGGGCTTGGGG
T ss_pred CCcEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCCc-------cccccC-CceEEccCCChHHHHHhhcC
Confidence 4689999999999999988875 252 577777641 112111 11111 11122345556664
Q ss_pred CCCcEEEeccCCCC-----------CCCHHHHHHHHcCCCCcEEEEcC
Q 012398 408 IKPTMLMGTSGVGK-----------TFTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 408 vkptvLIG~S~~~g-----------~ft~evv~~Ma~~~erPIIFaLS 444 (464)
++|++|=+.+... ..+..+++.+.+..-+.+||.=|
T Consensus 63 -~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 63 -RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp -CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred -CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 6999996654311 12677888887665567888543
No 234
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=78.11 E-value=2.6 Score=40.46 Aligned_cols=91 Identities=15% Similarity=0.210 Sum_probs=50.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI 408 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~v 408 (464)
..||.|+|+|..|.++|..|.. .|. +++++|++ .++ +...++. ......++.|+++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~-----~G~-------~V~~~dr~----~~~---~~~~~~~---g~~~~~~~~~~~~-- 70 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTE-----WPG-------GVTVYDIR----IEA---MTPLAEA---GATLADSVADVAA-- 70 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTT-----STT-------CEEEECSS----TTT---SHHHHHT---TCEECSSHHHHTT--
T ss_pred CCeEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEeCC----HHH---HHHHHHC---CCEEcCCHHHHHh--
Confidence 3589999999999999998865 353 57777864 221 2111110 0111246777665
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCC
Q 012398 409 KPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSN 445 (464)
Q Consensus 409 kptvLIG~S~~~g~ft~evv~~Ma~~~-erPIIFaLSN 445 (464)
+|++| ++.+.....+++++.+.++. +.-||.-+|+
T Consensus 71 -aDvvi-~~vp~~~~~~~v~~~l~~~l~~g~ivv~~st 106 (296)
T 3qha_A 71 -ADLIH-ITVLDDAQVREVVGELAGHAKPGTVIAIHST 106 (296)
T ss_dssp -SSEEE-ECCSSHHHHHHHHHHHHTTCCTTCEEEECSC
T ss_pred -CCEEE-EECCChHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 66665 22222223455555555432 3445555553
No 235
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=77.94 E-value=2.3 Score=39.65 Aligned_cols=34 Identities=18% Similarity=0.193 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
..+|||+|||.||+..|..|.. .|. ++.++|+..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 40 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM-----RQA-------SVKIIESLP 40 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcCC
Confidence 3589999999999999988865 353 688999863
No 236
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=77.83 E-value=1.9 Score=39.47 Aligned_cols=32 Identities=25% Similarity=0.360 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.+|+|+|||.||+..|..|.. .|. ++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGR-----ARK-------NILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCC
Confidence 589999999999999998865 353 68899963
No 237
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=77.78 E-value=1.8 Score=41.07 Aligned_cols=31 Identities=23% Similarity=0.402 Sum_probs=24.6
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
-|+|+|||.||+..|..|.+ .|+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~-----~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 38999999999999998865 475 46677764
No 238
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=77.60 E-value=5.3 Score=37.93 Aligned_cols=97 Identities=14% Similarity=0.158 Sum_probs=58.0
Q ss_pred CCCCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHH
Q 012398 325 GTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLD 403 (464)
Q Consensus 325 ~~l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e 403 (464)
++++..+|+|.|| |-.|..+++.|++ .|. +++.+|+.. .. ..+.. +.-+..+..++.+
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~-----~G~-------~V~~~~r~~----~~-~~~~~----~~~Dl~d~~~~~~ 73 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRT-----QGR-------TVRGFDLRP----SG-TGGEE----VVGSLEDGQALSD 73 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHH-----TTC-------CEEEEESSC----CS-SCCSE----EESCTTCHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHh-----CCC-------EEEEEeCCC----CC-CCccE----EecCcCCHHHHHH
Confidence 4677889999998 8999999988875 353 577777642 11 11111 1111112235778
Q ss_pred HHhcCCCcEEEeccCCCCCC--------------CHHHHHHHHcCCCCcEEEEcC
Q 012398 404 AVKAIKPTMLMGTSGVGKTF--------------TKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 404 ~v~~vkptvLIG~S~~~g~f--------------t~evv~~Ma~~~erPIIFaLS 444 (464)
++++ +|++|=+.+....- |..+++.+.+..-+.|||.=|
T Consensus 74 ~~~~--~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 74 AIMG--VSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHTT--CSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHhC--CCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 8884 99999877654211 345788888777778998544
No 239
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=77.59 E-value=2 Score=39.72 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=27.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
..+|+|+|||.||+..|..+.. .|. ++.++|++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSAR-----YML-------KTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHH-----CCC-------cEEEEecc
Confidence 4689999999999999998865 353 58999997
No 240
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=79.09 E-value=0.47 Score=43.66 Aligned_cols=25 Identities=12% Similarity=0.198 Sum_probs=21.3
Q ss_pred CCcceEEEeCcchHHHHHHHHHHHH
Q 012398 327 LADQTFLFLGAGEAGTGIAELIALE 351 (464)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~a 351 (464)
+.+.||.|+|+|..|..+|+.|...
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~ 41 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQC 41 (201)
Confidence 5567899999999999999988653
No 241
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=77.39 E-value=1.9 Score=40.25 Aligned_cols=30 Identities=20% Similarity=0.315 Sum_probs=23.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
||.|+|+|..|..+|..+.. |. +++++|++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~------g~-------~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR------RF-------PTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT------TS-------CEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHhC------CC-------eEEEEeCC
Confidence 79999999999999988742 42 47777763
No 242
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=77.36 E-value=4.5 Score=38.51 Aligned_cols=103 Identities=16% Similarity=0.153 Sum_probs=61.1
Q ss_pred CCCCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCc---cCCchhchhhhh-hcCCCC
Q 012398 325 GTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRK---ESLQHFKKPWAH-EHAPIK 399 (464)
Q Consensus 325 ~~l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~---~~l~~~k~~fa~-~~~~~~ 399 (464)
+++++.+|+|.|| |-.|..+++.|++ .| -+++++|++. .... ..+. ...+.. +..+..
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~l~--~v~~~~~Dl~d~~ 78 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLP-----QG-------HEILVIDNFA---TGKREVLPPVA--GLSVIEGSVTDAG 78 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGG-----GT-------CEEEEEECCS---SSCGGGSCSCT--TEEEEECCTTCHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhhhccC--CceEEEeeCCCHH
Confidence 4677889999998 8888888887764 24 3688888741 1100 1110 111111 111123
Q ss_pred CHHHHHhcCCCcEEEeccCCCCC-------------CCHHHHHHHHcCCCCcEEEEcC
Q 012398 400 SLLDAVKAIKPTMLMGTSGVGKT-------------FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 400 ~L~e~v~~vkptvLIG~S~~~g~-------------ft~evv~~Ma~~~erPIIFaLS 444 (464)
++.++++.+++|++|=+.+.... -+..+++.+.+..-+.|||.=|
T Consensus 79 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 79 LLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 47777875569999988775432 0345677776655567888543
No 243
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=77.34 E-value=2.1 Score=39.66 Aligned_cols=32 Identities=16% Similarity=0.267 Sum_probs=25.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.||.|+|+|..|..+|..+.. .| .+++++|++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~-----~g-------~~v~~~~~~ 35 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQ-----TP-------HELIISGSS 35 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----SS-------CEEEEECSS
T ss_pred cEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEECCC
Confidence 489999999999999987753 23 367888864
No 244
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=77.04 E-value=2.4 Score=41.93 Aligned_cols=35 Identities=34% Similarity=0.499 Sum_probs=28.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ-----AKYP-----GRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHh-----hCcC-----CCEEEEeCCC
Confidence 589999999999999998865 3542 3799999865
No 245
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=76.81 E-value=2.3 Score=41.32 Aligned_cols=37 Identities=16% Similarity=0.052 Sum_probs=28.2
Q ss_pred CCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
.+..+|+|+|||.||+..|..|.+ .|+ ++.++|+.-.
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~v~viE~~~~ 45 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQ-----NGW-------DVRLHEKSSE 45 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecCCC
Confidence 446789999999999999998865 353 6888887543
No 246
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=76.33 E-value=1.8 Score=41.55 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=26.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
..||.|+|+|..|.++|..|... |. +++++|++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA-----GL-------STWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 35899999999999999998753 53 57788874
No 247
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=76.06 E-value=2.3 Score=42.82 Aligned_cols=42 Identities=21% Similarity=0.323 Sum_probs=31.4
Q ss_pred HhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 322 LVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 322 ~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
+.++.-+..+|+|+|||.||+..|..|.+ .| .++.++++..-
T Consensus 4 ~~~~~~~~~~v~IIGaG~aGl~aA~~L~~-----~g-------~~v~v~E~~~~ 45 (489)
T 2jae_A 4 LIGKVKGSHSVVVLGGGPAGLCSAFELQK-----AG-------YKVTVLEARTR 45 (489)
T ss_dssp CCCCCCSCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred hhhcccCCCCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEeccCC
Confidence 44444567799999999999999998865 25 25777877643
No 248
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=75.97 E-value=2.2 Score=40.15 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
..+|+|+|||.||+..|..+.. .|+ ++.++|++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM-----RGL-------SFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 4689999999999999998754 253 688999864
No 249
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=75.91 E-value=1.6 Score=45.41 Aligned_cols=38 Identities=26% Similarity=0.376 Sum_probs=32.5
Q ss_pred CCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+.|++.||+|+|||..|..+|+.|+.+ |+ .+|.++|.+
T Consensus 36 ~~L~~~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 36 FLLDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp HHHHTCCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred HHhcCCEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 345788999999999999999999874 64 689999976
No 250
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=75.87 E-value=1.9 Score=43.28 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+||||+|+|.||+..|..|... +- .-+|.++|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MP-----DLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CT-----TCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----Cc-----CCeEEEEcCC
Confidence 4799999999999999998653 21 1368888875
No 251
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=75.83 E-value=1.9 Score=40.32 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=27.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
..+|||+|||.||+..|..|.. .|+ ++.++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLAR-----AEI-------KPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 4689999999999999998865 354 48888883
No 252
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=75.62 E-value=1.3 Score=42.64 Aligned_cols=99 Identities=15% Similarity=0.127 Sum_probs=59.0
Q ss_pred CCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh--------hcCC
Q 012398 327 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH--------EHAP 397 (464)
Q Consensus 327 l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~--------~~~~ 397 (464)
++..+|+|.|| |-.|..|++.|++ .| .+++.++++.- .....+. ..+.+.. +-.+
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~-----~g-------~~V~~l~R~~~---~~~~~~~-~~~~l~~~~v~~~~~Dl~d 71 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLD-----AH-------RPTYILARPGP---RSPSKAK-IFKALEDKGAIIVYGLINE 71 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSC---CCHHHHH-HHHHHHHTTCEEEECCTTC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CCEEEEECCCC---CChhHHH-HHHHHHhCCcEEEEeecCC
Confidence 44568999999 9999999988865 24 35888877520 0000010 0001111 1111
Q ss_pred CCCHHHHHhcCCCcEEEeccCCCC-CCCHHHHHHHHcCC-CCcEEE
Q 012398 398 IKSLLDAVKAIKPTMLMGTSGVGK-TFTKEVVEAMASFN-EKPVIF 441 (464)
Q Consensus 398 ~~~L~e~v~~vkptvLIG~S~~~g-~ft~evv~~Ma~~~-erPIIF 441 (464)
..+|.++++..++|++|-+.+... .-+..+++++.+.. -+-+|+
T Consensus 72 ~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 72 QEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred HHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 236888898666999998877543 24788899888765 444554
No 253
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=75.37 E-value=11 Score=39.80 Aligned_cols=66 Identities=27% Similarity=0.254 Sum_probs=46.3
Q ss_pred CCCceeecCcc---chhHHHHHHHHHHHHH------------------hCCCCCcceEEEeCcchHHHHHHHHHHHHHHH
Q 012398 296 SSHLVFNDDIQ---GTASVVLAGILSALKL------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSK 354 (464)
Q Consensus 296 ~~~~~FnDDiQ---GTaaV~LAgll~Alk~------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~ 354 (464)
..+.|.|---- .+|=-++|.+|+..|- .|..|.+.+|.|+|.|..|..+|+.+..
T Consensus 88 ~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~---- 163 (529)
T 1ygy_A 88 RGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAA---- 163 (529)
T ss_dssp TTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHT----
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHh----
Confidence 34555554322 3444577888876652 2567899999999999999999998864
Q ss_pred hcCCChhhhcCeEEEEccc
Q 012398 355 QTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 355 ~~G~s~~eA~~~i~lvD~~ 373 (464)
.|+ +++.+|+.
T Consensus 164 -~G~-------~V~~~d~~ 174 (529)
T 1ygy_A 164 -FGA-------YVVAYDPY 174 (529)
T ss_dssp -TTC-------EEEEECTT
T ss_pred -CCC-------EEEEECCC
Confidence 253 68888864
No 254
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=74.96 E-value=2.7 Score=41.48 Aligned_cols=36 Identities=14% Similarity=0.158 Sum_probs=27.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
.+|||+|||.||+..|..|.+..- .| .++.++|++-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~--~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG--SK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG--GG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC--CC-------CeEEEEeCCC
Confidence 479999999999999999876210 12 4788888765
No 255
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=74.44 E-value=3.8 Score=39.95 Aligned_cols=34 Identities=32% Similarity=0.453 Sum_probs=27.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+.+|||+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 38 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQK 38 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 4589999999999999988754 364 588999874
No 256
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=74.44 E-value=3.1 Score=41.26 Aligned_cols=38 Identities=13% Similarity=0.242 Sum_probs=29.7
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
...+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQ-----NGFE-----GRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHc-----cCcC-----CCEEEEecCCC
Confidence 45789999999999999999865 3542 36888888643
No 257
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=74.35 E-value=2.4 Score=39.95 Aligned_cols=33 Identities=18% Similarity=0.316 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
..+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGR-----AQL-------STLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----cCC-------cEEEEeCC
Confidence 4689999999999999988865 253 68899987
No 258
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=74.32 E-value=2.9 Score=41.00 Aligned_cols=36 Identities=14% Similarity=0.148 Sum_probs=27.6
Q ss_pred CCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
-+..+|+|+|||.||+..|..|.+ .|+ ++.++|+.-
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQ-----SGI-------DCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 345789999999999999998865 364 577888754
No 259
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=74.22 E-value=1.9 Score=47.23 Aligned_cols=38 Identities=26% Similarity=0.359 Sum_probs=33.1
Q ss_pred CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+|++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+=
T Consensus 14 kL~~s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D~ 51 (640)
T 1y8q_B 14 AVAGGRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLDT 51 (640)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECCB
T ss_pred HHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCCE
Confidence 57789999999999999999999875 65 5899999873
No 260
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=74.21 E-value=10 Score=36.10 Aligned_cols=104 Identities=19% Similarity=0.224 Sum_probs=59.7
Q ss_pred CCCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCch-hchhhhh-hcCCCCCHH
Q 012398 326 TLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH-FKKPWAH-EHAPIKSLL 402 (464)
Q Consensus 326 ~l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~-~k~~fa~-~~~~~~~L~ 402 (464)
.++..+|+|.|| |-.|..+++.|++ .| .+++.+|++. ....+.+.. .+..+.. +-.+..++.
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~l~~~~~~~~~~~Dl~d~~~~~ 82 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLE-----RG-------DKVVGIDNFA---TGRREHLKDHPNLTFVEGSIADHALVN 82 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCCCTTEEEEECCTTCHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhHhhcCCceEEEEeCCCHHHHH
Confidence 355678999995 8888888888765 24 3688888752 111111211 0111111 111123577
Q ss_pred HHHhcCCCcEEEeccCCCCC-------------CCHHHHHHHHcCCCCcEEEEcC
Q 012398 403 DAVKAIKPTMLMGTSGVGKT-------------FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 403 e~v~~vkptvLIG~S~~~g~-------------ft~evv~~Ma~~~erPIIFaLS 444 (464)
++++..++|++|=+.+.... -+..+++.+.+..-+.|||.=|
T Consensus 83 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 137 (333)
T 2q1w_A 83 QLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137 (333)
T ss_dssp HHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 78877789999987765432 1345777777655568888533
No 261
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=73.91 E-value=3 Score=39.32 Aligned_cols=33 Identities=24% Similarity=0.433 Sum_probs=27.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+..|+|+|||.+|+.+|-.|.+ .|. ++.++|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~-----~G~-------~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA-----GGH-------EVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 4589999999999999998865 364 68899987
No 262
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=73.71 E-value=3.5 Score=40.43 Aligned_cols=35 Identities=9% Similarity=0.122 Sum_probs=27.5
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
...+|+|+|||.||+..|..|.. .|+ ++.++|+.-
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD-----AGV-------DVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 35689999999999999998865 364 577777653
No 263
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=73.68 E-value=2.9 Score=41.03 Aligned_cols=36 Identities=19% Similarity=0.428 Sum_probs=28.4
Q ss_pred CCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
..+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 345789999999999999998864 354 678888753
No 264
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=73.57 E-value=4.7 Score=39.72 Aligned_cols=34 Identities=12% Similarity=0.096 Sum_probs=26.5
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+..+|.|+|+|..|.++|..+.. .|. +++++|++
T Consensus 15 ~~~~I~IIG~G~mG~alA~~L~~-----~G~-------~V~~~~~~ 48 (338)
T 1np3_A 15 QGKKVAIIGYGSQGHAHACNLKD-----SGV-------DVTVGLRS 48 (338)
T ss_dssp HTSCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECCT
T ss_pred cCCEEEEECchHHHHHHHHHHHH-----CcC-------EEEEEECC
Confidence 45689999999999999998865 353 47777764
No 265
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=73.46 E-value=3.6 Score=32.51 Aligned_cols=96 Identities=16% Similarity=0.161 Sum_probs=55.2
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHHHh
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVK 406 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~ 406 (464)
...+|+|+|+|..|..+++.+.. .| ..+++++|++. .+.+.+......+.. +.....++.++++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~-----~g------~~~v~~~~r~~----~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 68 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKT-----SS------NYSVTVADHDL----AALAVLNRMGVATKQVDAKDEAGLAKALG 68 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHH-----CS------SEEEEEEESCH----HHHHHHHTTTCEEEECCTTCHHHHHHHTT
T ss_pred CcCeEEEECCCHHHHHHHHHHHh-----CC------CceEEEEeCCH----HHHHHHHhCCCcEEEecCCCHHHHHHHHc
Confidence 35689999999999999998865 34 13688888741 110101100000100 1111134667776
Q ss_pred cCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 012398 407 AIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 407 ~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLS 444 (464)
. +|++|=+.+ ..++..+++.+.+.. .+ .|-+|
T Consensus 69 ~--~d~vi~~~~--~~~~~~~~~~~~~~g-~~-~~~~~ 100 (118)
T 3ic5_A 69 G--FDAVISAAP--FFLTPIIAKAAKAAG-AH-YFDLT 100 (118)
T ss_dssp T--CSEEEECSC--GGGHHHHHHHHHHTT-CE-EECCC
T ss_pred C--CCEEEECCC--chhhHHHHHHHHHhC-CC-EEEec
Confidence 4 999996653 357788888876533 33 34454
No 266
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=73.38 E-value=3.1 Score=39.88 Aligned_cols=34 Identities=15% Similarity=0.214 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
..+|||+|||.||+..|..+.. .|+ ++.++|+..
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 47 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGM-----NNI-------SCRIIESMP 47 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 5689999999999999988754 353 688999864
No 267
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=73.35 E-value=13 Score=35.73 Aligned_cols=101 Identities=15% Similarity=0.223 Sum_probs=61.3
Q ss_pred CCCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCch-hchhhhh-hcC-CCCCH
Q 012398 326 TLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH-FKKPWAH-EHA-PIKSL 401 (464)
Q Consensus 326 ~l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~-~k~~fa~-~~~-~~~~L 401 (464)
+++..+|+|.|| |-.|..+++.|++. .| -+++.+|+.. .+...+.. ....+.. +.. +..++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~----~~~~~~~~~~~v~~~~~Dl~~d~~~~ 85 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT----DRLGDLVKHERMHFFEGDITINKEWV 85 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC----TTTGGGGGSTTEEEEECCTTTCHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh----hhhhhhccCCCeEEEeCccCCCHHHH
Confidence 356789999996 99999999888753 13 3688888742 11111111 1111211 111 22357
Q ss_pred HHHHhcCCCcEEEeccCCCC----------------CCCHHHHHHHHcCCCCcEEEEcC
Q 012398 402 LDAVKAIKPTMLMGTSGVGK----------------TFTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 402 ~e~v~~vkptvLIG~S~~~g----------------~ft~evv~~Ma~~~erPIIFaLS 444 (464)
.+++++ +|++|=+.+... .-|..+++.+.+.. +.+||.=|
T Consensus 86 ~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS 141 (372)
T 3slg_A 86 EYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST 141 (372)
T ss_dssp HHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC
T ss_pred HHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc
Confidence 778885 999997665432 23467888888777 78998554
No 268
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=73.19 E-value=2.9 Score=39.22 Aligned_cols=33 Identities=27% Similarity=0.359 Sum_probs=27.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+.+|+|+|||.||+..|..+.+ .|+ ++.++|+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAAR-----SGF-------SVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCC
Confidence 4689999999999999998865 353 58899985
No 269
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=73.14 E-value=3.2 Score=39.89 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=28.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
+..|||+|||.+|+.+|..|.+ .|+ ++.++|+..+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~-----~G~-------~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAK-----ENK-------NTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCCC
Confidence 4689999999999999998875 353 6899998643
No 270
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=73.04 E-value=3.1 Score=38.40 Aligned_cols=33 Identities=15% Similarity=0.125 Sum_probs=25.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEE-Eccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWL-VDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~l-vD~~ 373 (464)
..+|||+|||.||+..|..|... |. ++.+ +|+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 35899999999999999988753 53 3556 8873
No 271
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=73.00 E-value=3 Score=40.05 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=27.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+-.|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~ 37 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRP 37 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 4579999999999999998865 354 577788764
No 272
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=72.92 E-value=6.4 Score=39.10 Aligned_cols=31 Identities=13% Similarity=0.222 Sum_probs=24.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVD 371 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD 371 (464)
.||.|+|||+.|.++|..|... .| .+++++|
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~----~G-------~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASR----DG-------VEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS----TT-------EEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhC----CC-------CEEEEEe
Confidence 4899999999999999888531 13 3677887
No 273
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=72.86 E-value=3.3 Score=35.70 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=27.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc-Ccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK-GLI 376 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~-GLl 376 (464)
-+|+|+|+|.+|+..|..+.+. | .++.++|+. +++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~~~~~ 37 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGGRSKV 37 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECSCCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCCCCcc
Confidence 3799999999999999988652 4 368888875 344
No 274
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=72.67 E-value=3.3 Score=42.34 Aligned_cols=109 Identities=13% Similarity=0.035 Sum_probs=62.0
Q ss_pred cceEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc--ccCc---ccCCCccCCchhchhhhhhcCCCCCHH
Q 012398 329 DQTFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVD--SKGL---IVSSRKESLQHFKKPWAHEHAPIKSLL 402 (464)
Q Consensus 329 d~riv~~G-AGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD--~~GL---l~~~r~~~l~~~k~~fa~~~~~~~~L~ 402 (464)
..||.|+| ||..|..+|-.|+. .++-- | ...|.++| .... +.-...| |.+-..+|.+...-..+..
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~-----~~l~~-e-~~~l~L~d~d~~~~~~~~~G~amD-L~h~~~p~~~~v~i~~~~y 103 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLAS-----GEVFG-Q-DQPIALKLLGSERSFQALEGVAME-LEDSLYPLLREVSIGIDPY 103 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHH-----TTTTC-T-TCCEEEEEECCGGGHHHHHHHHHH-HHTTTCTTEEEEEEESCHH
T ss_pred CCEEEEECCCChHHHHHHHHHHc-----CCcCC-C-CceeEEEecCccchhhhhHHHHHh-HHhhhhhhcCCcEEecCCH
Confidence 46999999 79999999888765 24411 1 11255544 3210 0000011 3222223332211124678
Q ss_pred HHHhcCCCcEEEeccCC---CCC-----------CCHHHHHHHHcC-CCCcEEEEcCCCC
Q 012398 403 DAVKAIKPTMLMGTSGV---GKT-----------FTKEVVEAMASF-NEKPVIFALSNPT 447 (464)
Q Consensus 403 e~v~~vkptvLIG~S~~---~g~-----------ft~evv~~Ma~~-~erPIIFaLSNPt 447 (464)
+++++ +|++|=+.+. +|- +=+++++.++++ +..-||+-.|||.
T Consensus 104 ~~~~d--aDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPv 161 (375)
T 7mdh_A 104 EVFED--VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPC 161 (375)
T ss_dssp HHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred HHhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCch
Confidence 88988 9988844443 331 224555667776 7889999999996
No 275
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=72.61 E-value=3 Score=39.22 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
..|+|+|||.+|+.+|..|.+ .|+ ++.++|+..
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~-----~G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEECCC
Confidence 479999999999999998875 364 588888763
No 276
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=72.23 E-value=4.1 Score=40.51 Aligned_cols=37 Identities=16% Similarity=0.245 Sum_probs=29.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl 376 (464)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~-----~g~~-----~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA-----EGFE-----GRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHc-----cCcC-----CeEEEEECCCCC
Confidence 489999999999999998865 3542 368998886543
No 277
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=72.09 E-value=2.4 Score=42.35 Aligned_cols=37 Identities=27% Similarity=0.359 Sum_probs=28.5
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcc
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl 376 (464)
+.-||||+|||.||+..|..|.. .| -+|.++|+.--+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~-----~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALG-----KC-------DDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTT-----TC-------SCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhC-----CC-------CEEEEEECCCCC
Confidence 44689999999999999998811 22 469999886544
No 278
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=72.06 E-value=3.2 Score=40.52 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~V~viE~~~ 39 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGR-----QGH-------RVVVVEQAR 39 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCC
Confidence 4689999999999999998865 364 477888753
No 279
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=71.99 E-value=6.7 Score=35.98 Aligned_cols=93 Identities=13% Similarity=0.160 Sum_probs=56.2
Q ss_pred CCCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHH
Q 012398 326 TLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDA 404 (464)
Q Consensus 326 ~l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 404 (464)
.++..+|+|.|| |-.|..+++.|++ .|... ..... .+...+ -+..+..++.++
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g~~~---~~~~~--------------~~~~~~----~D~~d~~~~~~~ 56 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVAD-----GAGLP---GEDWV--------------FVSSKD----ADLTDTAQTRAL 56 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHT-----TTCCT---TCEEE--------------ECCTTT----CCTTSHHHHHHH
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHh-----cCCcc---ccccc--------------ccCcee----cccCCHHHHHHH
Confidence 466789999997 8889999888865 35300 00000 010000 011111357888
Q ss_pred HhcCCCcEEEeccCCCCC-----------------CCHHHHHHHHcCCCCcEEEEcC
Q 012398 405 VKAIKPTMLMGTSGVGKT-----------------FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 405 v~~vkptvLIG~S~~~g~-----------------ft~evv~~Ma~~~erPIIFaLS 444 (464)
++..++|++|=+.+..+. -|..+++.+.+..-+.+||.=|
T Consensus 57 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 57 FEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp HHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 888889999988776431 1234688887766667998544
No 280
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=71.87 E-value=3.3 Score=39.85 Aligned_cols=34 Identities=18% Similarity=0.342 Sum_probs=28.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+..|+|+|||.+|+.+|..|.+ .|. ++.++|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~-----~G~-------~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAK-----RGE-------EVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 4689999999999999998875 353 599999874
No 281
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=71.87 E-value=3.6 Score=40.40 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=26.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
+|+|+|||.||+..|..|.++ |. ++.+++++.-
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~-----G~-------~V~vlE~~~~ 35 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA-----GK-------KVLLLEGGER 35 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHc-----CC-------eEEEEecCCC
Confidence 699999999999999988753 53 6888887543
No 282
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=71.78 E-value=3.9 Score=39.47 Aligned_cols=36 Identities=14% Similarity=0.215 Sum_probs=28.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+..|+|+|||.+|+.+|-.|.+. .| ..++.++|+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~----~G------~~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKN----HG------ITNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HC------CCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHh----cC------CCcEEEEeCCC
Confidence 56899999999999999988751 14 13689999875
No 283
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=71.73 E-value=9.6 Score=40.36 Aligned_cols=99 Identities=10% Similarity=0.198 Sum_probs=56.6
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCc-hhchhhhhhcCCCCCH----H
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ-HFKKPWAHEHAPIKSL----L 402 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~-~~k~~fa~~~~~~~~L----~ 402 (464)
-+.||||+|||+.|-++|.+|.+- .++. ..+|.+.|+.-. +.+ +. ....++....-...+. .
T Consensus 12 ~~~rVlIIGaGgVG~~va~lla~~----~dv~----~~~I~vaD~~~~----~~~-~~~~~g~~~~~~~Vdadnv~~~l~ 78 (480)
T 2ph5_A 12 FKNRFVILGFGCVGQALMPLIFEK----FDIK----PSQVTIIAAEGT----KVD-VAQQYGVSFKLQQITPQNYLEVIG 78 (480)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHH----BCCC----GGGEEEEESSCC----SCC-HHHHHTCEEEECCCCTTTHHHHTG
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC----CCCc----eeEEEEeccchh----hhh-HHhhcCCceeEEeccchhHHHHHH
Confidence 357899999999999999999764 3432 246888886421 111 11 1111221111111233 3
Q ss_pred HHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 012398 403 DAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 445 (464)
Q Consensus 403 e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN 445 (464)
..|+. +|++|=+|- ..++.+++++-.+ ..=-.+-++|
T Consensus 79 aLl~~--~DvVIN~s~--~~~~l~Im~acle--aGv~YlDTa~ 115 (480)
T 2ph5_A 79 STLEE--NDFLIDVSI--GISSLALIILCNQ--KGALYINAAT 115 (480)
T ss_dssp GGCCT--TCEEEECCS--SSCHHHHHHHHHH--HTCEEEESSC
T ss_pred HHhcC--CCEEEECCc--cccCHHHHHHHHH--cCCCEEECCC
Confidence 34554 599996553 3577788877664 2334566776
No 284
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=71.55 E-value=5.1 Score=39.32 Aligned_cols=40 Identities=23% Similarity=0.375 Sum_probs=25.1
Q ss_pred HHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 012398 402 LDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 445 (464)
Q Consensus 402 ~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN 445 (464)
...++..|||++||..+.. .+. ....|+....|+|.=-+|
T Consensus 85 ~~~l~~~~PDvVi~~g~~~-s~p---~~laA~~~~iP~vihe~n 124 (365)
T 3s2u_A 85 LRVIRQLRPVCVLGLGGYV-TGP---GGLAARLNGVPLVIHEQN 124 (365)
T ss_dssp HHHHHHHCCSEEEECSSST-HHH---HHHHHHHTTCCEEEEECS
T ss_pred HHHHHhcCCCEEEEcCCcc-hHH---HHHHHHHcCCCEEEEecc
Confidence 4567888999999987643 121 222344457888875454
No 285
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=71.43 E-value=9.8 Score=35.62 Aligned_cols=93 Identities=12% Similarity=0.200 Sum_probs=58.2
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHHHhc
Q 012398 330 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKA 407 (464)
Q Consensus 330 ~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~ 407 (464)
.||+|.|| |-.|..+++.|++ .| .+++.+++. .+... +. ...+.. +.. ..++.++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~----~~~~~-~~--~~~~~~~Dl~-~~~~~~~~~- 61 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKN-----DG-------NTPIILTRS----IGNKA-IN--DYEYRVSDYT-LEDLINQLN- 61 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESC----CC--------CCEEEECCCC-HHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCC----CCccc-CC--ceEEEEcccc-HHHHHHhhc-
Confidence 58999995 8999999988875 24 368888886 22111 21 111111 112 245677777
Q ss_pred CCCcEEEeccCCCCC------------CCHHHHHHHHcCCCCcEEEEcC
Q 012398 408 IKPTMLMGTSGVGKT------------FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 408 vkptvLIG~S~~~g~------------ft~evv~~Ma~~~erPIIFaLS 444 (464)
++|++|=+.+..+. -+..+++.+.+..-+.+||.=|
T Consensus 62 -~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 62 -DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp -TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 59999988775432 1467888888776666888433
No 286
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=71.39 E-value=3.8 Score=40.71 Aligned_cols=37 Identities=19% Similarity=0.353 Sum_probs=28.9
Q ss_pred CCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 012398 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (464)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~ 372 (464)
...++..|||+|||.+|+.+|..|.+. | ..++.++|+
T Consensus 19 ~~m~~~dVvIIGgGiaGls~A~~La~~-----G------~~~V~vlE~ 55 (448)
T 3axb_A 19 SHMPRFDYVVVGAGVVGLAAAYYLKVW-----S------GGSVLVVDA 55 (448)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHH-----H------CSCEEEEES
T ss_pred ccCCcCCEEEECcCHHHHHHHHHHHhC-----C------CCcEEEEcc
Confidence 334667899999999999999988763 3 137999998
No 287
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=70.83 E-value=27 Score=35.32 Aligned_cols=168 Identities=18% Similarity=0.234 Sum_probs=95.9
Q ss_pred HHHHHHHHhcCCCeeeeeecCCCccHHHHHHHHcCCCceee--cCccchhHHHHHHHHHHHHHhCCCCCcceEEEeCcch
Q 012398 262 EFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFN--DDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGE 339 (464)
Q Consensus 262 efv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGs 339 (464)
+.++.+. +| .++ |-+--++ ..+.+.+.+|- ++||.| || .-=-+=+||=++.-.+..| +|++.||+++|-+.
T Consensus 117 DTarvLs-~y-~D~-IviR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~TI~E~~G-~l~glkva~vGD~~ 189 (340)
T 4ep1_A 117 DTAKVLS-HY-IDG-IMIRTFS-HADVEELAKES-SIPVINGLTD-DHHPCQALADLMTIYEETN-TFKGIKLAYVGDGN 189 (340)
T ss_dssp HHHHHHH-HH-CSE-EEEECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCC
T ss_pred HHHHHHH-Hh-CCE-EEEecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCc
Confidence 4444333 35 443 3344443 24444555554 689998 44 2333456677666666655 59999999999982
Q ss_pred HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcC-C---CCCHHHHHhcCCCcEEEe
Q 012398 340 AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHA-P---IKSLLDAVKAIKPTMLMG 415 (464)
Q Consensus 340 Ag~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~-~---~~~L~e~v~~vkptvLIG 415 (464)
.+|+-++.++.+ .|+ ++.++-.+|+.-.. .+-..-+.+|+... . ..++.|||++ +||+.-
T Consensus 190 ---nva~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDVvyt 253 (340)
T 4ep1_A 190 ---NVCHSLLLASAK-VGM-------HMTVATPVGYRPNE---EIVKKALAIAKETGAEIEILHNPELAVNE--ADFIYT 253 (340)
T ss_dssp ---HHHHHHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHCCCEEEESCHHHHHTT--CSEEEE
T ss_pred ---hhHHHHHHHHHH-cCC-------EEEEECCcccCCCH---HHHHHHHHHHHHcCCeEEEECCHHHHhCC--CCEEEe
Confidence 378888777766 464 68888887774321 11112223343321 1 2689999998 999986
Q ss_pred ccCCC-C--------------CCCHHHHHHHHcCCCCcEEEEcCCCCC-CCCCCHHH
Q 012398 416 TSGVG-K--------------TFTKEVVEAMASFNEKPVIFALSNPTS-QSECTAEE 456 (464)
Q Consensus 416 ~S~~~-g--------------~ft~evv~~Ma~~~erPIIFaLSNPt~-~~E~tped 456 (464)
..=+. | -+|++.++.+ .++-||+-. =|.. --|++.|-
T Consensus 254 ~~w~smg~e~~~~~~~~~~~y~vt~ell~~a---k~dai~MHc-LPa~Rg~EIt~eV 306 (340)
T 4ep1_A 254 DVWMSMGQEGEEEKYTLFQPYQINKELVKHA---KQTYHFLHC-LPAHREEEVTGEI 306 (340)
T ss_dssp CCC------CHHHHHHHHGGGCBCHHHHTTS---CTTCEEEEC-SCCCBTTTBCHHH
T ss_pred cCccCCCCCchHHHHHHhccccCCHHHHHhc---CCCcEEECC-CCCCCCceeCHHH
Confidence 65332 1 2455554332 345566622 2432 26888764
No 288
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=70.82 E-value=3.6 Score=38.31 Aligned_cols=33 Identities=18% Similarity=0.204 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.+|+|+|||.||+..|..+.+ .|. .++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 379999999999999998865 353 268899985
No 289
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=70.66 E-value=3.7 Score=39.42 Aligned_cols=35 Identities=26% Similarity=0.271 Sum_probs=28.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl 376 (464)
..|||+|||.+|+.+|-.|.+ .|. ++.++|+....
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~-----~G~-------~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAK-----QGV-------KTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCCCC
Confidence 579999999999999998865 353 68999987543
No 290
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=70.60 E-value=8.6 Score=36.08 Aligned_cols=103 Identities=13% Similarity=0.211 Sum_probs=57.3
Q ss_pred CcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchh----chhhhh-hcCCCCCH
Q 012398 328 ADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF----KKPWAH-EHAPIKSL 401 (464)
Q Consensus 328 ~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~----k~~fa~-~~~~~~~L 401 (464)
++.+|+|.|| |-.|..+++.|++ .| .+++.+|++.--.. ...+... +..+.. +..+..++
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~ 67 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLE-----KG-------YEVYGADRRSGEFA--SWRLKELGIENDVKIIHMDLLEFSNI 67 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECSCCSTTT--THHHHHTTCTTTEEECCCCTTCHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CC-------CEEEEEECCCcccc--cccHhhccccCceeEEECCCCCHHHH
Confidence 4578999998 8888888888865 35 36888887421000 0000000 011111 11111357
Q ss_pred HHHHhcCCCcEEEeccCCCCC------C----------CHHHHHHHHcCCC-CcEEEEcC
Q 012398 402 LDAVKAIKPTMLMGTSGVGKT------F----------TKEVVEAMASFNE-KPVIFALS 444 (464)
Q Consensus 402 ~e~v~~vkptvLIG~S~~~g~------f----------t~evv~~Ma~~~e-rPIIFaLS 444 (464)
.++++.+++|++|=+.+.... + +..+++.+.+... +.|||.=|
T Consensus 68 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 68 IRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp HHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 788888789999988775421 0 3345555554433 67888544
No 291
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=70.52 E-value=5.5 Score=37.41 Aligned_cols=31 Identities=19% Similarity=0.274 Sum_probs=24.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
||.|+|+|..|..+|..|.. .|. +++++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~-----~g~-------~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMK-----HGY-------PLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 68999999999999998865 253 57788763
No 292
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=70.52 E-value=4.1 Score=42.08 Aligned_cols=32 Identities=19% Similarity=0.187 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G-------~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----G-------ANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----C-------CEEEEEECC
Confidence 4899999999999999988753 5 368888875
No 293
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=70.51 E-value=4.1 Score=41.83 Aligned_cols=35 Identities=23% Similarity=0.275 Sum_probs=28.5
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
...+|+|+|+|.||+..|..|... |. ++.++|+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~~ 155 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRYD 155 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeccC
Confidence 357899999999999999998753 53 588998863
No 294
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=70.44 E-value=3.5 Score=42.05 Aligned_cols=38 Identities=16% Similarity=0.221 Sum_probs=28.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.+|+|+|||.||+..|..+.+.. ..|++ ..++.++|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~--~~G~~----~~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ--EKGAE----IPELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH--HTTCC----CCEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhh--hcCCC----CCcEEEEEcC
Confidence 48999999999999999987632 13542 0138899886
No 295
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=70.42 E-value=4.2 Score=39.50 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
.+|+|+|||.||+..|-.|... |+ ++.++|+.-
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 4799999999999999988753 64 477777654
No 296
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=70.35 E-value=12 Score=32.92 Aligned_cols=50 Identities=16% Similarity=0.215 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhCCCCCcceEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 312 VLAGILSALKLVGGTLADQTFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 312 ~LAgll~Alk~~g~~l~d~riv~~G-AGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.++..+.+++-...--.+++|+|.| +|..|..+++++... |. +++.+|++
T Consensus 22 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-----G~-------~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI-----GA-------RIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-----TC-------EEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHc-----CC-------EEEEEeCC
Confidence 4444455554333334578999999 588888888776542 52 57777763
No 297
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=70.31 E-value=3.5 Score=41.42 Aligned_cols=37 Identities=24% Similarity=0.376 Sum_probs=29.1
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
...+|+|+|||.||+..|..|.+ .|.. .++.++|+..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~~ 41 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERRG 41 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecCC
Confidence 35689999999999999998864 3541 3788999863
No 298
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=70.17 E-value=20 Score=36.00 Aligned_cols=137 Identities=6% Similarity=0.019 Sum_probs=85.0
Q ss_pred HHHHHHHHHHhcCCCeeeeeecCCCccHHHHHHHHcCCCceee--cCccchhHHHHHHHHHHHHHhC------CCCCcce
Q 012398 260 LQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFN--DDIQGTASVVLAGILSALKLVG------GTLADQT 331 (464)
Q Consensus 260 idefv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Alk~~g------~~l~d~r 331 (464)
+.+.++.+ .+| .++ |-+--++. .+.+.+.+|- ++||.| || +-=-+=+||=++.-.+..| +++++.|
T Consensus 90 l~DTarvl-s~~-~D~-iviR~~~~-~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~ 163 (328)
T 3grf_A 90 VQDTAEVF-SRM-VDI-CTARLATK-EMMREMAQHA-SVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIK 163 (328)
T ss_dssp HHHHHHHH-TTT-CSE-EEEECSSH-HHHHHHHHHC-SSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCC
T ss_pred HHHHHHHH-Hhh-CCE-EEEecCCh-hHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCCcE
Confidence 34444433 345 333 44555543 4445555553 689998 55 4444556777777666666 4799999
Q ss_pred EEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhh--cC----CCCCHHHHH
Q 012398 332 FLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE--HA----PIKSLLDAV 405 (464)
Q Consensus 332 iv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~--~~----~~~~L~e~v 405 (464)
|+++|-+. + .+|+-++.++.+ .|+ ++.++-.+|+..+-. +.+...-+.+++. .. ...++.|||
T Consensus 164 va~vGD~~-~-~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~p~-~~~~~~~~~~~~~~~~g~~v~~~~d~~eav 232 (328)
T 3grf_A 164 FAYCGDSM-N-NVTYDLMRGCAL-LGM-------ECHVCCPDHKDFKPI-KEVIDECEEIIAKHGTGGSIKIFHDCKKGC 232 (328)
T ss_dssp EEEESCCS-S-HHHHHHHHHHHH-HTC-------EEEEECCSSGGGSCC-HHHHHHHHHHHHHHTCCCEEEEESSHHHHH
T ss_pred EEEeCCCC-c-chHHHHHHHHHH-cCC-------EEEEECChHhhhCCC-HHHHHHHHHHHhhccCCCeEEEEcCHHHHh
Confidence 99999985 2 478888777766 464 688888888863111 1122222334332 11 136899999
Q ss_pred hcCCCcEEEe
Q 012398 406 KAIKPTMLMG 415 (464)
Q Consensus 406 ~~vkptvLIG 415 (464)
++ +||+.-
T Consensus 233 ~~--aDvvyt 240 (328)
T 3grf_A 233 EG--VDVVYT 240 (328)
T ss_dssp TT--CSEEEE
T ss_pred cC--CCEEEe
Confidence 98 999973
No 299
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=70.09 E-value=4.2 Score=33.97 Aligned_cols=34 Identities=21% Similarity=0.454 Sum_probs=26.8
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+..+|+|+|+|..|..+|+.|.. .|. +++++|++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~-----~g~-------~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTA-----AGK-------KVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEECC
Confidence 34689999999999999998865 353 58888874
No 300
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=70.07 E-value=17 Score=31.70 Aligned_cols=91 Identities=9% Similarity=0.134 Sum_probs=54.7
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchh--chhhhh-hcCCCCCHHHHHh
Q 012398 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF--KKPWAH-EHAPIKSLLDAVK 406 (464)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~--k~~fa~-~~~~~~~L~e~v~ 406 (464)
||+|.|| |-.|..+++.|++ .| .+++.++++. +.+... ...+.. +..+..+ ++++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~-------~~~~~~~~~~~~~~~D~~d~~~--~~~~ 60 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN-----RG-------HEVTAIVRNA-------GKITQTHKDINILQKDIFDLTL--SDLS 60 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCS-------HHHHHHCSSSEEEECCGGGCCH--HHHT
T ss_pred eEEEEcCCchhHHHHHHHHHh-----CC-------CEEEEEEcCc-------hhhhhccCCCeEEeccccChhh--hhhc
Confidence 7999996 8889989888875 25 3688887741 111110 011111 1111112 6777
Q ss_pred cCCCcEEEeccCCCCC-------CCHHHHHHHHcCCCCcEEEEcC
Q 012398 407 AIKPTMLMGTSGVGKT-------FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 407 ~vkptvLIG~S~~~g~-------ft~evv~~Ma~~~erPIIFaLS 444 (464)
+ +|++|=+.+.+.. .++.+++.|.+.....+||.-|
T Consensus 61 ~--~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 61 D--QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp T--CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred C--CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 5 8999987765421 2478888888765567887544
No 301
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=69.93 E-value=4.1 Score=41.15 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVE-----QG-------AQVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 4689999999999999988764 24 379999987
No 302
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=69.79 E-value=5.5 Score=38.61 Aligned_cols=105 Identities=19% Similarity=0.220 Sum_probs=55.8
Q ss_pred cchhHHHHHHHHHHHH-HhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCC
Q 012398 306 QGTASVVLAGILSALK-LVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESL 384 (464)
Q Consensus 306 QGTaaV~LAgll~Alk-~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l 384 (464)
++.....++..+.+++ ..+. ..++|+|+|||..|..++.+... .|. ++++.+|+. ..+ +
T Consensus 143 ~aa~~~~~~ta~~~l~~~~~~--~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~----~~~---~ 202 (343)
T 2dq4_A 143 VAAILEPFGNAVHTVYAGSGV--SGKSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDPN----PYR---L 202 (343)
T ss_dssp HHTTHHHHHHHHHHHHSTTCC--TTSCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC----HHH---H
T ss_pred HHHhhhHHHHHHHHHHHhCCC--CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---H
Confidence 4433334455566676 4433 88999999999888877765543 353 368877753 111 1
Q ss_pred chhchhhhhh--cCCCCCHHHHHhc---CCCcEEEeccCCCCCCCHHHHHHHH
Q 012398 385 QHFKKPWAHE--HAPIKSLLDAVKA---IKPTMLMGTSGVGKTFTKEVVEAMA 432 (464)
Q Consensus 385 ~~~k~~fa~~--~~~~~~L~e~v~~---vkptvLIG~S~~~g~ft~evv~~Ma 432 (464)
...++ +|.. .....++.+.++. -++|++|=+++.+ ...++.++.|+
T Consensus 203 ~~~~~-la~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~~l~ 253 (343)
T 2dq4_A 203 AFARP-YADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNE-AAIHQGLMALI 253 (343)
T ss_dssp GGGTT-TCSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCH-HHHHHHHHHEE
T ss_pred HHHHH-hHHhccCcCccCHHHHHHHhcCCCCCEEEECCCCH-HHHHHHHHHHh
Confidence 11111 1211 0111345555542 2577777666532 23445566664
No 303
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=69.77 E-value=3.8 Score=39.13 Aligned_cols=35 Identities=11% Similarity=0.250 Sum_probs=28.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl 376 (464)
..|+|+|||.+|+.+|-.|.+ .|+ ++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~-----~G~-------~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATR-----AGL-------NVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHH-----TTC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCCCC
Confidence 479999999999999998875 353 58999987543
No 304
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=69.76 E-value=15 Score=34.37 Aligned_cols=95 Identities=16% Similarity=0.231 Sum_probs=54.6
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCC
Q 012398 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 409 (464)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vk 409 (464)
+|+|.|| |-.|..+++.|++ .| .++.+++.. ..+...+...-..+.-+..+ .++.++++.
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~-----~g--------~~v~~~~~~---~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~-- 63 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSE-----SN--------EIVVIDNLS---SGNEEFVNEAARLVKADLAA-DDIKDYLKG-- 63 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-----TS--------CEEEECCCS---SCCGGGSCTTEEEECCCTTT-SCCHHHHTT--
T ss_pred EEEEECCCchHHHHHHHHHHh-----CC--------CEEEEEcCC---CCChhhcCCCcEEEECcCCh-HHHHHHhcC--
Confidence 7899997 8888888887754 23 344444321 11111111111111112233 578888884
Q ss_pred CcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 012398 410 PTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 410 ptvLIG~S~~~g~----------------ft~evv~~Ma~~~erPIIFaLS 444 (464)
+|++|-+.+.+.. -+..+++.|.+..-+.|||.=|
T Consensus 64 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 64 AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp CSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 9999988775421 1234778887766678999544
No 305
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=69.73 E-value=3.9 Score=40.28 Aligned_cols=35 Identities=26% Similarity=0.288 Sum_probs=26.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+.+|+|+|||.||+..|..|.+ .|++ ++.++|+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~-----~G~~------~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ-----AGIG------KVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCS------EEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEECCC
Confidence 4689999999999999998865 3642 367777643
No 306
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=69.50 E-value=3.3 Score=38.94 Aligned_cols=33 Identities=21% Similarity=0.262 Sum_probs=26.8
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~ 372 (464)
...+|+|+|||.||+..|..|.+ .|+ ++.++|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAAR-----AEL-------KPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEec
Confidence 34689999999999999998865 253 5788887
No 307
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=69.36 E-value=3.5 Score=41.69 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=26.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
||||+|||.||+..|..+.+. |. .-+|.++|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~-----~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DK-----ESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CS-----SSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CC-----CCcEEEEeCCC
Confidence 799999999999999988653 42 13688888753
No 308
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=69.22 E-value=5.1 Score=39.87 Aligned_cols=39 Identities=18% Similarity=0.136 Sum_probs=30.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIV 377 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~ 377 (464)
..+|||+|||.||+..|..|.+. |.+ .+|.++|+..-+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-----g~~-----~~V~lie~~~~~~ 45 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-----GYQ-----GLITVVGDEAERP 45 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-----TCC-----SCEEEEESSCSCC
T ss_pred CCcEEEECChHHHHHHHHHHHcc-----CCC-----CeEEEEECCCCCc
Confidence 46799999999999999998763 531 3688999876443
No 309
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=69.17 E-value=4.2 Score=41.12 Aligned_cols=37 Identities=14% Similarity=0.100 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
..+|||+|||.||+..|..|.+.. .| .+|.++|+..-
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~---~g-------~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLD---PE-------AHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHC---TT-------SEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhhC---cC-------CCEEEEECCCc
Confidence 368999999999999999886530 12 47888988754
No 310
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=69.08 E-value=6.7 Score=41.77 Aligned_cols=37 Identities=11% Similarity=0.233 Sum_probs=30.2
Q ss_pred CCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
.++.+|||+|||.||+..|-.|.. .|+ ++.++|+.-.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCCCC
Confidence 456899999999999999988865 354 6899999843
No 311
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=69.03 E-value=2 Score=43.14 Aligned_cols=92 Identities=21% Similarity=0.267 Sum_probs=54.7
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhh---hhcCCCCCHHHH
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA---HEHAPIKSLLDA 404 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa---~~~~~~~~L~e~ 404 (464)
++.||+|+|||.+|-.+|+.|.+. .++.++|++ .++ +......+. -+.....+|.++
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~~---a~~la~~~~~~~~d~~~~~~l~~l 74 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NEN---LEKVKEFATPLKVDASNFDKLVEV 74 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HHH---HHHHTTTSEEEECCTTCHHHHHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HHH---HHHHHhhCCeEEEecCCHHHHHHH
Confidence 467999999999999999987531 357788773 221 111111111 011122468888
Q ss_pred HhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 012398 405 VKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 445 (464)
Q Consensus 405 v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN 445 (464)
+++ +|++|-+ ++. .+..+++++-.+ ..-.++-+|.
T Consensus 75 l~~--~DvVIn~-~P~-~~~~~v~~a~l~--~G~~~vD~s~ 109 (365)
T 2z2v_A 75 MKE--FELVIGA-LPG-FLGFKSIKAAIK--SKVDMVDVSF 109 (365)
T ss_dssp HTT--CSCEEEC-CCH-HHHHHHHHHHHH--TTCCEEECCC
T ss_pred HhC--CCEEEEC-CCh-hhhHHHHHHHHH--hCCeEEEccC
Confidence 886 9999976 333 356667665443 2334566776
No 312
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=68.95 E-value=5.1 Score=38.47 Aligned_cols=34 Identities=18% Similarity=0.282 Sum_probs=27.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+..|+|+|||.+|+.+|-.|.+ .| .++.++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~-----~G-------~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILAR-----KG-------YSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeccC
Confidence 4589999999999999998854 35 3699999864
No 313
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=68.85 E-value=4.3 Score=39.46 Aligned_cols=36 Identities=14% Similarity=0.297 Sum_probs=29.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl 376 (464)
+..|||+|||.+|+.+|-.|.+ .|. ++.++|+....
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~-----~G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAE-----RGH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCCCC
Confidence 3579999999999999998865 364 58999987654
No 314
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=68.74 E-value=8.6 Score=36.02 Aligned_cols=37 Identities=22% Similarity=0.230 Sum_probs=26.7
Q ss_pred CCCcceEEEeCc-ch--HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 326 TLADQTFLFLGA-GE--AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 326 ~l~d~riv~~GA-Gs--Ag~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
.+++.+++|.|| |. .|.+||+.+++ .|. +++++|++-
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G~-------~V~~~~r~~ 62 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHR-----EGA-------ELAFTYVGQ 62 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHH-----TTC-------EEEEEECTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHH-----cCC-------EEEEeeCch
Confidence 477889999997 34 67777777764 352 688888864
No 315
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=68.39 E-value=4.5 Score=42.49 Aligned_cols=35 Identities=23% Similarity=0.238 Sum_probs=29.0
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999999865 354 589999874
No 316
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=68.18 E-value=15 Score=34.01 Aligned_cols=36 Identities=25% Similarity=0.325 Sum_probs=24.8
Q ss_pred CCCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 326 TLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 326 ~l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.+++.+++|.|| |..|.++|+.|++ .|. +++++|++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~-----~G~-------~V~~~~r~ 62 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGS-----LGA-------RVVLTARD 62 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 467889999997 4456666666654 353 58888874
No 317
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=67.88 E-value=8.2 Score=36.07 Aligned_cols=87 Identities=11% Similarity=0.154 Sum_probs=55.3
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhc
Q 012398 329 DQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKA 407 (464)
Q Consensus 329 d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~ 407 (464)
..+|+|.|| |-.|..+++.|++ .|. +++++++. ... ++.+ ..++.++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~-D~~d-----------~~~~~~~~~~ 53 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DEL-NLLD-----------SRAVHDFFAS 53 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTC-CTTC-----------HHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccC-CccC-----------HHHHHHHHHh
Confidence 468999996 8888888888764 242 46666543 111 1211 1346777875
Q ss_pred CCCcEEEeccCCCCC-----------------CCHHHHHHHHcCCCCcEEEEcC
Q 012398 408 IKPTMLMGTSGVGKT-----------------FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 408 vkptvLIG~S~~~g~-----------------ft~evv~~Ma~~~erPIIFaLS 444 (464)
+++|++|=+.+..+. -+..+++.+.+..-+.+||.=|
T Consensus 54 ~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 54 ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 679999988776531 2345677777665567888544
No 318
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=67.77 E-value=4.1 Score=40.69 Aligned_cols=39 Identities=15% Similarity=0.269 Sum_probs=28.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
...|||+|||.||+..|..|.+..... + .-++.++|+..
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~-~------~~~v~liE~~~ 68 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQ-G------ALEVLFLDKQG 68 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHH-C------CCCEEEEESCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhccccc-C------cccEEEEecCC
Confidence 347999999999999999997642110 0 03688998875
No 319
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=67.68 E-value=5.2 Score=38.83 Aligned_cols=54 Identities=15% Similarity=0.094 Sum_probs=34.7
Q ss_pred cchhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 012398 306 QGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (464)
Q Consensus 306 QGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~ 372 (464)
++...-.++..+.|++..+. ..++|+|+|||..|..++.+... .|. ++++.+|+
T Consensus 147 ~aa~~~~~~ta~~~l~~~~~--~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~ 200 (348)
T 2d8a_A 147 YATLQEPLGNAVDTVLAGPI--SGKSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEP 200 (348)
T ss_dssp HHTTHHHHHHHHHHHTTSCC--TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECS
T ss_pred HHHhhhHHHHHHHHHHhcCC--CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 44333344445666643333 88999999999888888776643 353 35777765
No 320
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=67.54 E-value=5.4 Score=38.97 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=26.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
+|+|+|||.+|+.+|..|.+ .| .++.++++..-
T Consensus 2 dVvVIGaGiaGLsaA~~La~-----~G-------~~V~vlE~~~~ 34 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSK-----AG-------HEVEVFERLPI 34 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHh-----CC-------CceEEEeCCCC
Confidence 69999999999999998875 25 36888888643
No 321
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=67.49 E-value=9.6 Score=34.11 Aligned_cols=102 Identities=14% Similarity=0.118 Sum_probs=57.8
Q ss_pred CCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHH
Q 012398 327 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDA 404 (464)
Q Consensus 327 l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~ 404 (464)
++..+++|.|| |-.|..+++.|++. |. ..+++++|++. ++...+......+.. +-.+..++.++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~-----G~-----~~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~ 81 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQ-----GL-----FSKVTLIGRRK----LTFDEEAYKNVNQEVVDFEKLDDYASA 81 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH-----TC-----CSEEEEEESSC----CCCCSGGGGGCEEEECCGGGGGGGGGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcC-----CC-----CCEEEEEEcCC----CCccccccCCceEEecCcCCHHHHHHH
Confidence 34568999996 77888888888753 42 12688888752 111111111111111 11112346666
Q ss_pred HhcCCCcEEEeccCCCC-------------CCCHHHHHHHHcCCCCcEEEEcC
Q 012398 405 VKAIKPTMLMGTSGVGK-------------TFTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 405 v~~vkptvLIG~S~~~g-------------~ft~evv~~Ma~~~erPIIFaLS 444 (464)
++ ++|++|=+.+... .-+..+++.|.+...+.|||.=|
T Consensus 82 ~~--~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 82 FQ--GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp GS--SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hc--CCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 66 4999998776531 01456778887765567888544
No 322
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=67.23 E-value=14 Score=34.71 Aligned_cols=99 Identities=14% Similarity=0.175 Sum_probs=57.2
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHHHhc
Q 012398 330 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKA 407 (464)
Q Consensus 330 ~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~ 407 (464)
.+|+|.|| |-.|..+++.|++ .| .+++.+|+.- ....+.+.. ...+.. +.....++.++++.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~ 65 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVD-----EG-------LSVVVVDNLQ---TGHEDAITE-GAKFYNGDLRDKAFLRDVFTQ 65 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCT-TSEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCC---cCchhhcCC-CcEEEECCCCCHHHHHHHHhh
Confidence 37899986 8888888888865 24 3678777631 110111211 111111 11112357777875
Q ss_pred CCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 012398 408 IKPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 408 vkptvLIG~S~~~g~----------------ft~evv~~Ma~~~erPIIFaLS 444 (464)
.++|++|=+.+.... -+..+++.+.+..-+.+||.=|
T Consensus 66 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 66 ENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp SCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 569999988775421 1345677777665567888543
No 323
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=67.01 E-value=12 Score=34.99 Aligned_cols=78 Identities=14% Similarity=0.204 Sum_probs=42.0
Q ss_pred CCCCCcceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHH
Q 012398 324 GGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLL 402 (464)
Q Consensus 324 g~~l~d~riv~~GAGs-Ag~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~ 402 (464)
..+++++++||-||+. .|.++|+.+++ .|. +++++|++.- .+......+.-+.....++.
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~-----~G~-------~V~~~~r~~~-------~~~~~~~~~~~Dv~~~~~v~ 69 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVR-----YGA-------KVVSVSLDEK-------SDVNVSDHFKIDVTNEEEVK 69 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEESCC---------CTTSSEEEECCTTCHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHH-----CCC-------EEEEEeCCch-------hccCceeEEEecCCCHHHHH
Confidence 4578899999999853 45555555543 353 6888876421 11111111111211223455
Q ss_pred HHHhcC-----CCcEEEeccCCC
Q 012398 403 DAVKAI-----KPTMLMGTSGVG 420 (464)
Q Consensus 403 e~v~~v-----kptvLIG~S~~~ 420 (464)
++++.+ ++|+||=..+..
T Consensus 70 ~~~~~~~~~~g~iD~lv~nAg~~ 92 (269)
T 3vtz_A 70 EAVEKTTKKYGRIDILVNNAGIE 92 (269)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCcC
Confidence 555544 799999766543
No 324
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=67.01 E-value=2.4 Score=44.00 Aligned_cols=32 Identities=19% Similarity=0.345 Sum_probs=25.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.||||+|+|.||+..|+.|.. .+ -+|.++|++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 489999999999999887632 12 379999986
No 325
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=66.95 E-value=7.7 Score=35.85 Aligned_cols=96 Identities=15% Similarity=0.087 Sum_probs=57.2
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHHHhcC
Q 012398 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAI 408 (464)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~v 408 (464)
||+|.|| |-.|..+++.|.+. .| .+++.++++. ++...+......+.. +-.+..++.+++++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~R~~----~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~- 65 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIAN----HI-------DHFHIGVRNV----EKVPDDWRGKVSVRQLDYFNQESMVEAFKG- 65 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT----TC-------TTEEEEESSG----GGSCGGGBTTBEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEEcCCchHHHHHHHHHhhC----CC-------CcEEEEECCH----HHHHHhhhCCCEEEEcCCCCHHHHHHHHhC-
Confidence 6899996 88999998886531 13 3577776642 111111111111111 11122367888886
Q ss_pred CCcEEEeccCCCCC------CCHHHHHHHHcCCCCcEEEEc
Q 012398 409 KPTMLMGTSGVGKT------FTKEVVEAMASFNEKPVIFAL 443 (464)
Q Consensus 409 kptvLIG~S~~~g~------ft~evv~~Ma~~~erPIIFaL 443 (464)
+|++|=+++.... .++.+++.|.+..-+.|||.=
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~S 105 (289)
T 3e48_A 66 -MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIG 105 (289)
T ss_dssp -CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred -CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEc
Confidence 8999987765421 256788888877667788843
No 326
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=66.83 E-value=4.6 Score=42.51 Aligned_cols=35 Identities=14% Similarity=0.161 Sum_probs=28.7
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999998865 353 688999864
No 327
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=66.81 E-value=3.3 Score=42.98 Aligned_cols=88 Identities=16% Similarity=0.168 Sum_probs=50.6
Q ss_pred CCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhh-cCCCCCHHH
Q 012398 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-HAPIKSLLD 403 (464)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~-~~~~~~L~e 403 (464)
..|...||+|+|.+.-..++++.|.+ .|+.. +.+.-.. ..+.+... +...- ..+...+++
T Consensus 309 ~~l~Gkrv~i~~~~~~~~~l~~~L~e-----lGm~v------v~~~~~~------~~~~~~~~--~~~~v~~~D~~~le~ 369 (458)
T 3pdi_B 309 FMLSSARTAIAADPDLLLGFDALLRS-----MGAHT------VAAVVPA------RAAALVDS--PLPSVRVGDLEDLEH 369 (458)
T ss_dssp HHHTTCEEEEECCHHHHHHHHHHHHT-----TTCEE------EEEEESS------CCSCCTTT--TSSCEEESHHHHHHH
T ss_pred HhcCCCEEEEECCcHHHHHHHHHHHH-----CCCEE------EEEEECC------CChhhhhC--ccCcEEeCCHHHHHH
Confidence 45778999999999999999998843 57632 1111111 11111110 00000 011124777
Q ss_pred HHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEE
Q 012398 404 AVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVI 440 (464)
Q Consensus 404 ~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPII 440 (464)
.++..+||++||-|- .+.+.+++ .-|.|
T Consensus 370 ~i~~~~pDllig~~~-----~~~~a~k~----gip~~ 397 (458)
T 3pdi_B 370 AARAGQAQLVIGNSH-----ALASARRL----GVPLL 397 (458)
T ss_dssp HHHHHTCSEEEECTT-----HHHHHHHT----TCCEE
T ss_pred HHHhcCCCEEEEChh-----HHHHHHHc----CCCEE
Confidence 888899999999554 23455554 56766
No 328
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=66.76 E-value=10 Score=37.89 Aligned_cols=32 Identities=13% Similarity=0.242 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.||.|+|+|..|..+|..|... | .+++.+|++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~-----G-------~~V~~~dr~ 40 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA-----N-------HSVFGYNRS 40 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSC
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CEEEEEeCC
Confidence 5899999999999999988753 5 358888874
No 329
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=66.61 E-value=5.7 Score=39.10 Aligned_cols=33 Identities=18% Similarity=0.338 Sum_probs=26.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
+|+|+|||.+|+..|-.|.+ .| .++.++++..-
T Consensus 2 dVvVIGaGiaGLsaA~~La~-----~G-------~~V~vlE~~~~ 34 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLAR-----NG-------HEIIVLEKSAM 34 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCCC
Confidence 79999999999999998865 35 36888888643
No 330
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=66.41 E-value=4.8 Score=40.89 Aligned_cols=33 Identities=27% Similarity=0.450 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~-----~g~-------~V~liE~~ 36 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAA-----FGK-------RVALIESK 36 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEcCC
Confidence 4689999999999999998865 253 68999986
No 331
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=66.41 E-value=3.4 Score=41.78 Aligned_cols=30 Identities=23% Similarity=0.441 Sum_probs=24.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
||.|+|+|..|..+|..+.+ | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999987742 3 368888874
No 332
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=66.40 E-value=4.8 Score=39.74 Aligned_cols=37 Identities=24% Similarity=0.305 Sum_probs=29.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl 376 (464)
+..|||+|||.||+.+|-.|.+ .|. +++.++|+....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~-----~G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLAR-----RGY------TNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----cCC------CcEEEEeCCCCC
Confidence 4579999999999999988865 364 269999987654
No 333
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=66.37 E-value=2.6 Score=39.35 Aligned_cols=99 Identities=11% Similarity=0.116 Sum_probs=58.0
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCc--cCCchhchhhhh-hcCCCCCHHHH
Q 012398 329 DQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRK--ESLQHFKKPWAH-EHAPIKSLLDA 404 (464)
Q Consensus 329 d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~--~~l~~~k~~fa~-~~~~~~~L~e~ 404 (464)
..+|+|.|| |..|..+++.|++. | ..+++.++++. ... ..+......+.+ +-.+..++.++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~R~~----~~~~~~~l~~~~~~~~~~D~~d~~~l~~~ 69 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-----G------TFKVRVVTRNP----RKKAAKELRLQGAEVVQGDQDDQVIMELA 69 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-----C------SSEEEEEESCT----TSHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-----C------CceEEEEEcCC----CCHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence 368999998 88999999888753 3 13677777641 110 001100111111 11112367788
Q ss_pred HhcCCCcEEEeccCCCCC--------CCHHHHHHHHcCCCCcEEEEcCC
Q 012398 405 VKAIKPTMLMGTSGVGKT--------FTKEVVEAMASFNEKPVIFALSN 445 (464)
Q Consensus 405 v~~vkptvLIG~S~~~g~--------ft~evv~~Ma~~~erPIIFaLSN 445 (464)
+++ +|++|-+++.... .++.+++.|.+..-+-||| .|-
T Consensus 70 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~-~S~ 115 (299)
T 2wm3_A 70 LNG--AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY-SGL 115 (299)
T ss_dssp HTT--CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE-CCC
T ss_pred Hhc--CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE-EcC
Confidence 886 8999987653211 3556778887655567888 664
No 334
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=66.28 E-value=5.5 Score=40.05 Aligned_cols=34 Identities=21% Similarity=0.272 Sum_probs=27.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+.+|+|+|||.||+..|..+.+. |. ++.++|+..
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-----g~-------~V~liE~~~ 39 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-----GF-------KTTCIEKRG 39 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCC
Confidence 45799999999999999888653 53 689999873
No 335
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=66.21 E-value=4.6 Score=40.96 Aligned_cols=35 Identities=23% Similarity=0.314 Sum_probs=27.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~-----~G~-------~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGK-----RGR-------RVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 4589999999999999988765 353 5889998654
No 336
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=66.16 E-value=10 Score=34.27 Aligned_cols=101 Identities=18% Similarity=0.167 Sum_probs=59.0
Q ss_pred CCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHH
Q 012398 327 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDA 404 (464)
Q Consensus 327 l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~ 404 (464)
..-.+|+|.|| |-.|..+++.|++ .| .-++++++++. ++...+......+.. +..+..++.++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~-----~G------~~~V~~~~R~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 85 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLAD-----KQ------TIKQTLFARQP----AKIHKPYPTNSQIIMGDVLNHAALKQA 85 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTT-----CT------TEEEEEEESSG----GGSCSSCCTTEEEEECCTTCHHHHHHH
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHh-----CC------CceEEEEEcCh----hhhcccccCCcEEEEecCCCHHHHHHH
Confidence 34468999995 7888888887764 24 13677777642 111111111111111 11122357788
Q ss_pred HhcCCCcEEEeccCCCCC--CCHHHHHHHHcCCCCcEEEEcC
Q 012398 405 VKAIKPTMLMGTSGVGKT--FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 405 v~~vkptvLIG~S~~~g~--ft~evv~~Ma~~~erPIIFaLS 444 (464)
++. .|++|=..+.... -++.+++.|.+..-+-|||.=|
T Consensus 86 ~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 86 MQG--QDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp HTT--CSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hcC--CCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 886 7999966554432 2677899998766667888544
No 337
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=66.10 E-value=5.2 Score=39.88 Aligned_cols=35 Identities=20% Similarity=0.256 Sum_probs=27.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
.+|||+|||.||+..|..|... | ..-++.++|++-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~-----~-----~g~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL-----M-----PDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----C-----TTCEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC-----C-----CCCeEEEECCCC
Confidence 5899999999999999988762 1 123788888864
No 338
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=66.06 E-value=5.5 Score=38.86 Aligned_cols=33 Identities=27% Similarity=0.349 Sum_probs=24.6
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+|+|+|||.||+..|-.|.+. .-|+ ++.++|+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~---~~G~-------~V~v~E~~ 34 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA---RPLW-------AIDIVEKN 34 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH---CTTS-------EEEEECSS
T ss_pred eEEEECCCHHHHHHHHHHHhc---CCCC-------CEEEEECC
Confidence 699999999999999988653 0043 56677764
No 339
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=66.00 E-value=4.4 Score=41.20 Aligned_cols=31 Identities=19% Similarity=0.237 Sum_probs=25.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
||.|+|+|..|..+|..+... | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~-----G-------~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR-----G-------HEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 799999999999999988653 5 258888874
No 340
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=65.99 E-value=2.7 Score=44.65 Aligned_cols=103 Identities=15% Similarity=0.142 Sum_probs=62.0
Q ss_pred CCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCC--C-----ccCCchhchhhh----h
Q 012398 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSS--R-----KESLQHFKKPWA----H 393 (464)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~--r-----~~~l~~~k~~fa----~ 393 (464)
++|++.||+|+|+|..|.-||+.|+.+ |+ ++|.++|.+=+=..+ | .+++-..|..-+ +
T Consensus 28 ~~L~~~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~ 96 (531)
T 1tt5_A 28 EALESAHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQ 96 (531)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCCBBCHHHHHHCTTCCGGGBTSBHHHHHHHHHH
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCCEechhhcccCccCChhhcCcHHHHHHHHHHH
Confidence 357789999999999999999999864 64 689999976321110 0 011211221111 1
Q ss_pred hc-CCC------CCHHH-------HHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEE
Q 012398 394 EH-API------KSLLD-------AVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFA 442 (464)
Q Consensus 394 ~~-~~~------~~L~e-------~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFa 442 (464)
.. +.+ ..+.+ .++ +.|++|.++.. .=+.-.|-.++.....|+|.+
T Consensus 97 ~lNp~v~v~~~~~~~~~~~~~~~~~~~--~~DvVi~~~d~--~~~r~~ln~~c~~~~iplI~~ 155 (531)
T 1tt5_A 97 ELNSDVSGSFVEESPENLLDNDPSFFC--RFTVVVATQLP--ESTSLRLADVLWNSQIPLLIC 155 (531)
T ss_dssp TTCTTSBCCEESSCHHHHHHSCGGGGG--GCSEEEEESCC--HHHHHHHHHHHHHTTCCEEEE
T ss_pred HhCCCCeEEEeCCCcchhhhhhHHHhc--CCCEEEEeCCC--HHHHHHHHHHHHHcCCCEEEE
Confidence 11 111 23443 233 48999987542 235566666666677999876
No 341
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=65.94 E-value=4.3 Score=38.54 Aligned_cols=34 Identities=18% Similarity=0.247 Sum_probs=26.9
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
...+|+|+|||.||+..|..+.+ .|+ ++.++|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAAR-----AQL-------APLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEecC
Confidence 45689999999999999998865 354 47788854
No 342
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=65.82 E-value=4.2 Score=41.16 Aligned_cols=96 Identities=20% Similarity=0.277 Sum_probs=54.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-----------hcCCC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-----------EHAPI 398 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-----------~~~~~ 398 (464)
.||+|+|||-.|..+|+.|.+ .|- ...++.++|++ .++ +......+.. +..+.
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~-----~g~----~~~~V~v~~r~----~~~---~~~la~~l~~~~~~~~~~~~~D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAM-----NRE----VFSHITLASRT----LSK---CQEIAQSIKAKGYGEIDITTVDADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----CTT----TCCEEEEEESC----HHH---HHHHHHHHHHTTCCCCEEEECCTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC----CceEEEEEECC----HHH---HHHHHHHhhhhcCCceEEEEecCCCH
Confidence 489999999877777777653 231 01478888874 111 2221122211 11112
Q ss_pred CCHHHHHhcCCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 012398 399 KSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 445 (464)
Q Consensus 399 ~~L~e~v~~vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN 445 (464)
.++.++++..++|++|=+++. .+..+++++..+. ..++|= +|+
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~--~~~~~v~~a~l~~-g~~vvD-~a~ 108 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALP--YQDLTIMEACLRT-GVPYLD-TAN 108 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCG--GGHHHHHHHHHHH-TCCEEE-SSC
T ss_pred HHHHHHHHhhCCCEEEECCCc--ccChHHHHHHHHh-CCCEEE-ecC
Confidence 368888888889999977653 2456666665443 344442 544
No 343
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=65.81 E-value=4.9 Score=37.67 Aligned_cols=32 Identities=22% Similarity=0.301 Sum_probs=24.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
=-|||+|||+||+..|..+.+ .|+ ++.++|+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~-----~g~-------~V~liE~~ 38 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASR-----ANL-------KTVMIERG 38 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 358999999999999987754 354 57888864
No 344
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=65.81 E-value=5.2 Score=40.75 Aligned_cols=65 Identities=12% Similarity=0.161 Sum_probs=28.8
Q ss_pred ecCccchhHHHHHHHHHHHHH---hCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcc
Q 012398 302 NDDIQGTASVVLAGILSALKL---VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (464)
Q Consensus 302 nDDiQGTaaV~LAgll~Alk~---~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl 376 (464)
|...||-|+++.---+.--.. ...+....+|||+|||.||+..|..+.+.. .| .++.++|+...+
T Consensus 6 ~~~~~~~~~~~~np~~g~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~~ 73 (480)
T 3cgb_A 6 HHHHHGMASMTGGQQMGRTLYDDDDKDRWGSMNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEIY 73 (480)
T ss_dssp -------------------------------CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSCC
T ss_pred cccccccccccchhhhcccccCCCCcCccccceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCCC
Confidence 344567776665443332211 111222358999999999999999886531 12 479999987543
No 345
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=65.71 E-value=5.1 Score=40.81 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+.+|+|+|||.||+..|..+.+ .|. ++.++|++.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~-----~G~-------~V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQ-----LGM-------KVAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCC
Confidence 3679999999999999998865 353 689999754
No 346
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=65.61 E-value=11 Score=36.69 Aligned_cols=49 Identities=22% Similarity=0.161 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 012398 312 VLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (464)
Q Consensus 312 ~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~ 372 (464)
.++..+.|++..+.+ ..++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGVT-LGHKVLVCGAGPIGMVTLLVAKA-----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 444556666554433 46799999999888877765543 353 46777775
No 347
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=65.55 E-value=13 Score=36.50 Aligned_cols=49 Identities=16% Similarity=0.190 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 012398 312 VLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (464)
Q Consensus 312 ~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~ 372 (464)
+....+.|++..+....+++|+|.|||..|..++.++.. .| | +++.+|+
T Consensus 171 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~-----~G-----a--~Vi~~~~ 219 (366)
T 1yqd_A 171 AGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKA-----FG-----S--KVTVIST 219 (366)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEEES
T ss_pred hHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHH-----CC-----C--EEEEEeC
Confidence 334445677766655478999999999888888776643 35 2 5777775
No 348
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=65.50 E-value=3.6 Score=39.28 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.+|+|+|||.+|+.+|..|.+.. ..| -++.++|+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~--~~G-------~~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT--SGP-------LYLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC---CC-------EEEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc--cCC-------ceEEEEECC
Confidence 37999999999999999886410 024 268888876
No 349
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=65.38 E-value=5.3 Score=40.01 Aligned_cols=36 Identities=19% Similarity=0.342 Sum_probs=27.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
.+|||+|||.||+..|..|...+. .| -+|.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~--~g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG--SG-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG--GG-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCC--Cc-------CEEEEEeCCC
Confidence 589999999999999999876321 12 3688888764
No 350
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=65.35 E-value=10 Score=33.98 Aligned_cols=92 Identities=15% Similarity=0.206 Sum_probs=51.9
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcC-
Q 012398 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI- 408 (464)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~v- 408 (464)
+++|.|| |-.|..+++.|++ .| .+++++|++. . .+.. .+.-+.....++.++++.+
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~---~~~~---~~~~D~~~~~~~~~~~~~~~ 60 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLAR-----AG-------HTVIGIDRGQ----A---DIEA---DLSTPGGRETAVAAVLDRCG 60 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCh----h---Hccc---cccCCcccHHHHHHHHHHcC
Confidence 6899987 6777777777764 35 3688888741 1 1111 1111111113466666644
Q ss_pred -CCcEEEeccCCCCC-----------------CCHHHHHHHHcCCCCcEEEEcC
Q 012398 409 -KPTMLMGTSGVGKT-----------------FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 409 -kptvLIG~S~~~g~-----------------ft~evv~~Ma~~~erPIIFaLS 444 (464)
++|++|=+.+.... +.+..++.|.+....-|||.=|
T Consensus 61 ~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS 114 (255)
T 2dkn_A 61 GVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGS 114 (255)
T ss_dssp TCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECC
T ss_pred CCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEec
Confidence 79999987765431 2244455666544456777443
No 351
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=65.28 E-value=5.4 Score=40.26 Aligned_cols=34 Identities=21% Similarity=0.226 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+.+|||+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ-----LGM-------KTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 3579999999999999987765 253 689999873
No 352
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=65.26 E-value=6.6 Score=40.95 Aligned_cols=39 Identities=15% Similarity=0.293 Sum_probs=30.1
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcc
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl 376 (464)
...+|||+|||.||+..|..|.+.. .| .+|.++|+..-+
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~---~g-------~~V~vie~~~~~ 73 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLS---EE-------DEIIMVERGEYI 73 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHC---SS-------SEEEEECSSSCS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhC---cC-------CCEEEEECCCCc
Confidence 3478999999999999999887530 12 478999987653
No 353
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=65.19 E-value=5 Score=37.30 Aligned_cols=32 Identities=25% Similarity=0.327 Sum_probs=24.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.+|+|+|||.||+..|..+.+ .|. ++.+++.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 479999999999999998764 353 46667653
No 354
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=65.13 E-value=5.6 Score=41.38 Aligned_cols=38 Identities=21% Similarity=0.320 Sum_probs=29.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
..+|||+|||.||...|-.|..... .| -+|.++|+.-.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQ--GT-------ADITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTT--TS-------SEEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcC--CC-------CcEEEEeCCCC
Confidence 4689999999999999999876320 13 37999998654
No 355
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=65.12 E-value=5.3 Score=40.10 Aligned_cols=32 Identities=16% Similarity=0.313 Sum_probs=26.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.+|+|+|||.||+..|-.|.+ .|+ ++.++|++
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~-----~G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQ-----HDV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------eEEEEcCC
Confidence 579999999999999988875 364 57788765
No 356
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=65.06 E-value=4.5 Score=41.17 Aligned_cols=37 Identities=22% Similarity=0.398 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
.+|||+|||.||+..|-.|..... .|+ ++.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G~-------~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DRI-------DVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GGS-------EEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEEecCCC
Confidence 479999999999999999876321 243 6899998754
No 357
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=65.06 E-value=4.9 Score=40.92 Aligned_cols=35 Identities=31% Similarity=0.442 Sum_probs=28.5
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
.+.+|+|+|||.||+..|..+.+ .|. ++.++|+.-
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~-----~g~-------~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS-----YGA-------KTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TSC-------CEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 35689999999999999998865 253 689999863
No 358
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=65.04 E-value=7.3 Score=35.64 Aligned_cols=38 Identities=21% Similarity=0.166 Sum_probs=28.0
Q ss_pred CCCCCcceEEEeCcc---hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 324 GGTLADQTFLFLGAG---EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 324 g~~l~d~riv~~GAG---sAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
..++++.++||.||+ -.|.++|+.|++ .|. +++++|++
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G~-------~V~~~~r~ 49 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKR-----EGA-------ELAFTYVG 49 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cCC-------CEEEEecc
Confidence 356889999999984 566677777764 352 68888875
No 359
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=64.97 E-value=6.2 Score=39.70 Aligned_cols=36 Identities=22% Similarity=0.273 Sum_probs=28.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
.+|||+|||.||+..|..|.+.. .| .++.++|+.--
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~---~g-------~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKY---PQ-------AEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC---SS-------SEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCC
Confidence 48999999999999999887631 12 37889988653
No 360
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=64.90 E-value=9.3 Score=37.08 Aligned_cols=103 Identities=15% Similarity=0.188 Sum_probs=58.4
Q ss_pred CCCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCc-hhchhhhh-hcCCCCCHH
Q 012398 326 TLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ-HFKKPWAH-EHAPIKSLL 402 (464)
Q Consensus 326 ~l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~-~~k~~fa~-~~~~~~~L~ 402 (464)
+++..+|+|.|| |-.|..+++.|++ .| ..+++.+|+..- .....+. ..+..+.. +..+..++.
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~-----~g------~~~V~~~~r~~~---~~~~~l~~~~~v~~~~~Dl~d~~~l~ 94 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLE-----LG------VNQVHVVDNLLS---AEKINVPDHPAVRFSETSITDDALLA 94 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHH-----TT------CSEEEEECCCTT---CCGGGSCCCTTEEEECSCTTCHHHHH
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHH-----cC------CceEEEEECCCC---CchhhccCCCceEEEECCCCCHHHHH
Confidence 456679999997 8888888888865 24 136888877421 1001121 01111111 111112455
Q ss_pred HHHhcCCCcEEEeccCCCCC----------------CCHHHHHHHHcC-CCCcEEEEcC
Q 012398 403 DAVKAIKPTMLMGTSGVGKT----------------FTKEVVEAMASF-NEKPVIFALS 444 (464)
Q Consensus 403 e~v~~vkptvLIG~S~~~g~----------------ft~evv~~Ma~~-~erPIIFaLS 444 (464)
++++ ++|++|=+.+.... -+..+++.+.+. .-+.+||.=|
T Consensus 95 ~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 95 SLQD--EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp HCCS--CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHhh--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 6666 59999988775421 145567777665 4467888544
No 361
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=64.83 E-value=6.1 Score=41.05 Aligned_cols=36 Identities=17% Similarity=0.244 Sum_probs=28.9
Q ss_pred CCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
-.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRE-----LGR-------SVHVIETAG 49 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 345689999999999999998875 364 588898764
No 362
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=64.72 E-value=7.6 Score=35.90 Aligned_cols=86 Identities=13% Similarity=0.249 Sum_probs=54.7
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCC
Q 012398 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 409 (464)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vk 409 (464)
||+|.|| |-.|..+++.|+ . | .+++.+|++.-.... ++. +..++.+++++.+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~~~~~---D~~-----------d~~~~~~~~~~~~ 54 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSKEFCG---DFS-----------NPKGVAETVRKLR 54 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCSSSCC---CTT-----------CHHHHHHHHHHHC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEeccccccccc---cCC-----------CHHHHHHHHHhcC
Confidence 7899998 888888888775 2 3 368888775311100 111 1135777888778
Q ss_pred CcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 012398 410 PTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 410 ptvLIG~S~~~g~----------------ft~evv~~Ma~~~erPIIFaLS 444 (464)
+|++|=+.+.... -+..+++.+.+..- .+||.=|
T Consensus 55 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 104 (299)
T 1n2s_A 55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYST 104 (299)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEE
T ss_pred CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEec
Confidence 9999988775431 14567777765544 5888544
No 363
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=64.66 E-value=6.4 Score=40.18 Aligned_cols=37 Identities=19% Similarity=0.314 Sum_probs=28.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
..+|||+|||.||+..|..+.+. |. ...++.++|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-----g~----~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-----YG----DANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----HG----GGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-----CC----CCCeEEEEECCC
Confidence 46899999999999999998764 20 124789999865
No 364
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=64.55 E-value=6.3 Score=40.54 Aligned_cols=37 Identities=14% Similarity=0.225 Sum_probs=28.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl 376 (464)
.+|||+|||.||+..|..|.+. |- .-+|.++|+..-+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~-----~~-----~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL-----SE-----TAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CS-----SSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhh-----Cc-----CCCEEEEECCCCc
Confidence 4899999999999999988653 21 2478999987543
No 365
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=64.54 E-value=15 Score=34.36 Aligned_cols=98 Identities=16% Similarity=0.280 Sum_probs=55.6
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHHHhcC
Q 012398 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAI 408 (464)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~v 408 (464)
||+|.|| |-.|..+++.|++ .| .+++.+|+.- ......+.. ...+.. +-.+..++.++++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~ 65 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLA-----RG-------LEVAVLDNLA---TGKRENVPK-GVPFFRVDLRDKEGVERAFREF 65 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEECCCS---SCCGGGSCT-TCCEECCCTTCHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHH-----CC-------CEEEEEECCC---cCchhhccc-CeEEEECCCCCHHHHHHHHHhc
Confidence 6899997 7788888887764 35 2577777621 111111111 111111 111113467778766
Q ss_pred CCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 012398 409 KPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 409 kptvLIG~S~~~g~----------------ft~evv~~Ma~~~erPIIFaLS 444 (464)
++|++|=+.+..+. -+..+++++.+..-+.|||.=|
T Consensus 66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 117 (311)
T 2p5y_A 66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFAST 117 (311)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 79999988775431 0345677776655567888544
No 366
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=64.51 E-value=6.9 Score=42.03 Aligned_cols=34 Identities=24% Similarity=0.401 Sum_probs=28.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
..+|||+|||.||+..|..+... |. ++.++|+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~-----G~-------~V~liE~~~ 424 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR-----GY-------DVVLAEAGR 424 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCC
Confidence 46899999999999999998753 53 699999863
No 367
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=64.37 E-value=6.1 Score=36.06 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=26.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+-+|+|+|||.||+..|..+.+ .|+ ++.++++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~-----~g~-------~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQ-----KGV-------RVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 4579999999999999998865 353 58888875
No 368
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=64.33 E-value=5.7 Score=41.00 Aligned_cols=37 Identities=24% Similarity=0.382 Sum_probs=28.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
..+|||+|||.||+..|-.|..... .|+ ++.++|+.-
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~--~G~-------~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQ--QQA-------NITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCC--SSC-------EEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEECCCC
Confidence 4689999999999999998875210 243 688999854
No 369
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=64.32 E-value=33 Score=33.11 Aligned_cols=88 Identities=11% Similarity=0.199 Sum_probs=51.7
Q ss_pred HHHHHhCCCCCcceEEEe-CcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhh--
Q 012398 318 SALKLVGGTLADQTFLFL-GAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-- 394 (464)
Q Consensus 318 ~Alk~~g~~l~d~riv~~-GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~-- 394 (464)
++++..+ ...++++||. |+|..|..++.+.... | | +++.+|+. ..| ..+++.
T Consensus 155 ~~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~-----G-----a--~Vi~~~~~----~~~--------~~~~~~~G 209 (349)
T 3pi7_A 155 AMFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEE-----G-----F--RPIVTVRR----DEQ--------IALLKDIG 209 (349)
T ss_dssp HHHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHH-----T-----C--EEEEEESC----GGG--------HHHHHHHT
T ss_pred HHHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHC-----C-----C--EEEEEeCC----HHH--------HHHHHHcC
Confidence 5666655 4445777776 7888888887766542 5 2 68877752 111 122221
Q ss_pred -----cCCCCCHHHHHhc----CCCcEEEeccCCCCCCCHHHHHHHH
Q 012398 395 -----HAPIKSLLDAVKA----IKPTMLMGTSGVGKTFTKEVVEAMA 432 (464)
Q Consensus 395 -----~~~~~~L~e~v~~----vkptvLIG~S~~~g~ft~evv~~Ma 432 (464)
.....++.+.++. -++|++|=+++.. ..++.++.|+
T Consensus 210 a~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~~--~~~~~~~~l~ 254 (349)
T 3pi7_A 210 AAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTGP--LASAIFNAMP 254 (349)
T ss_dssp CSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCHH--HHHHHHHHSC
T ss_pred CCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCCh--hHHHHHhhhc
Confidence 0112356665543 3699999877643 2367777775
No 370
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=64.32 E-value=8.2 Score=34.37 Aligned_cols=100 Identities=15% Similarity=0.031 Sum_probs=56.9
Q ss_pred CcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHHH
Q 012398 328 ADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAV 405 (464)
Q Consensus 328 ~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v 405 (464)
+..+|+|.|| |-.|..+++.|++ .| ...++++++++. ++.+.+. ....+.. +..+..++.+++
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~-----~~-----~g~~V~~~~r~~----~~~~~~~-~~~~~~~~D~~d~~~~~~~~ 67 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKE-----GS-----DKFVAKGLVRSA----QGKEKIG-GEADVFIGDITDADSINPAF 67 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHH-----TT-----TTCEEEEEESCH----HHHHHTT-CCTTEEECCTTSHHHHHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHh-----cC-----CCcEEEEEEcCC----CchhhcC-CCeeEEEecCCCHHHHHHHH
Confidence 4578999996 7888888888765 22 013688887741 1100110 0111111 111123577778
Q ss_pred hcCCCcEEEeccCCCCC-----------------------------CCHHHHHHHHcCCCCcEEEEcC
Q 012398 406 KAIKPTMLMGTSGVGKT-----------------------------FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 406 ~~vkptvLIG~S~~~g~-----------------------------ft~evv~~Ma~~~erPIIFaLS 444 (464)
+. +|++|=+.+.... -+..+++.|.+..-+.|||.=|
T Consensus 68 ~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 68 QG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp TT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred cC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 75 8999977654310 1467788887765567888533
No 371
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=63.92 E-value=5.3 Score=41.28 Aligned_cols=35 Identities=20% Similarity=0.275 Sum_probs=28.7
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
.+.+|||+|||.||+..|..+.+. |. ++.++|+..
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-----G~-------~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-----GG-------RQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 356899999999999999988652 53 689999875
No 372
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=63.91 E-value=7 Score=39.24 Aligned_cols=37 Identities=22% Similarity=0.294 Sum_probs=29.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
..+|||+|||.||+..|..+.+ .|.+ .+|.++|+..-
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~-----~g~~-----~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRA-----SGWE-----GNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHc-----cCcC-----CCEEEEECCCC
Confidence 3689999999999999998865 3542 37999987643
No 373
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=63.66 E-value=6.6 Score=36.49 Aligned_cols=97 Identities=13% Similarity=0.171 Sum_probs=57.1
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHHHhc
Q 012398 330 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKA 407 (464)
Q Consensus 330 ~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~ 407 (464)
.+|+|.|| |-.|..+++.|++.- .| .+++.+|++. .. ..+.+ +..+.. +..+..++.++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~---~g-------~~V~~~~r~~----~~-~~~~~-~~~~~~~D~~d~~~~~~~~~~ 66 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLY---GT-------ENVIASDIRK----LN-TDVVN-SGPFEVVNALDFNQIEHLVEV 66 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHH---CG-------GGEEEEESCC----CS-CHHHH-SSCEEECCTTCHHHHHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHhC---CC-------CEEEEEcCCC----cc-ccccC-CCceEEecCCCHHHHHHHHhh
Confidence 57999998 889999998886530 02 3577777641 11 00100 111111 11112357788886
Q ss_pred CCCcEEEeccCCCCC---------------CCHHHHHHHHcCCCCcEEEE
Q 012398 408 IKPTMLMGTSGVGKT---------------FTKEVVEAMASFNEKPVIFA 442 (464)
Q Consensus 408 vkptvLIG~S~~~g~---------------ft~evv~~Ma~~~erPIIFa 442 (464)
.++|++|=+.+.... -|..+++.+.+..-+.+||.
T Consensus 67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ 116 (312)
T 2yy7_A 67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWP 116 (312)
T ss_dssp TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECC
T ss_pred cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 679999988775321 13456777776555678874
No 374
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=63.64 E-value=6.6 Score=40.31 Aligned_cols=37 Identities=22% Similarity=0.393 Sum_probs=29.0
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
...+|||+|||.||+..|..|... +. ..+|.++|+..
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~-----~~-----g~~V~lie~~~ 46 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRAR-----DP-----GARVLIVSEDP 46 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHH-----ST-----TCEEEEEESSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhc-----CC-----CCeEEEEeCCC
Confidence 356899999999999999988653 21 24799999874
No 375
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=63.51 E-value=5.9 Score=40.88 Aligned_cols=34 Identities=24% Similarity=0.431 Sum_probs=27.2
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.+.+|+|+|||.+|+..|-.|.. .|+ ++.++|+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 44 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQL 44 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 56789999999999999998865 365 46677764
No 376
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=63.15 E-value=5 Score=37.28 Aligned_cols=31 Identities=16% Similarity=0.227 Sum_probs=24.0
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.|+|+|||+||+..|..+.+ .|+ ++.++|+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 58999999999999976654 354 46788864
No 377
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=63.13 E-value=5.2 Score=36.66 Aligned_cols=97 Identities=14% Similarity=0.136 Sum_probs=54.5
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHHHhcC
Q 012398 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAI 408 (464)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~v 408 (464)
||+|.|| |-.|..+++.|++. ..| -+++.++++. .+...+......+.. +-.+..++.+++++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~- 65 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP----AKAQALAAQGITVRQADYGDEAALTSALQG- 65 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTCHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh----HhhhhhhcCCCeEEEcCCCCHHHHHHHHhC-
Confidence 5889998 88888888877541 002 3577777641 111101111111111 11112357778876
Q ss_pred CCcEEEeccCCCC----CCCHHHHHHHHcCCCCcEEEEc
Q 012398 409 KPTMLMGTSGVGK----TFTKEVVEAMASFNEKPVIFAL 443 (464)
Q Consensus 409 kptvLIG~S~~~g----~ft~evv~~Ma~~~erPIIFaL 443 (464)
+|++|=+++... ..+..+++.|.+..-+.|||.=
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~S 103 (286)
T 2zcu_A 66 -VEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTS 103 (286)
T ss_dssp -CSEEEECC--------CHHHHHHHHHHHHTCCEEEEEE
T ss_pred -CCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 899998776421 2478889998876656788843
No 378
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=63.10 E-value=21 Score=34.92 Aligned_cols=33 Identities=18% Similarity=0.426 Sum_probs=25.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.++|+|.|||..|..++.++... | | +++.+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-----G-----a--~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-----G-----L--EVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-----T-----C--EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----C-----C--EEEEEeCC
Confidence 89999999988888887766532 5 2 68888764
No 379
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=63.03 E-value=6.7 Score=40.46 Aligned_cols=36 Identities=31% Similarity=0.404 Sum_probs=28.6
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
...+|+|+|||.||+..|..+.. .|+ ++.++|+..-
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liEk~~~ 126 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL-----LGA-------RVVLVEKRIK 126 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCSS
T ss_pred CCCCEEEECccHHHHHHHHHHHH-----CCC-------eEEEEEeccc
Confidence 35689999999999999998865 363 6888887643
No 380
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=63.03 E-value=14 Score=32.77 Aligned_cols=94 Identities=14% Similarity=0.192 Sum_probs=56.6
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-hcCC-CCCHHHHHhc
Q 012398 331 TFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAP-IKSLLDAVKA 407 (464)
Q Consensus 331 riv~~G-AGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~-~~~L~e~v~~ 407 (464)
||+|.| +|-.|..+++.|++ .| -++++++++. .+...+ .+..+.. +..+ ..++.+++++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~----~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~ 63 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLST-----TD-------YQIYAGARKV----EQVPQY--NNVKAVHFDVDWTPEEMAKQLHG 63 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTT-----SS-------CEEEEEESSG----GGSCCC--TTEEEEECCTTSCHHHHHTTTTT
T ss_pred eEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCc----cchhhc--CCceEEEecccCCHHHHHHHHcC
Confidence 789999 47778888877754 34 3688888752 111111 1111111 1111 2346666765
Q ss_pred CCCcEEEeccCCCCC--------CCHHHHHHHHcCCCCcEEEEcC
Q 012398 408 IKPTMLMGTSGVGKT--------FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 408 vkptvLIG~S~~~g~--------ft~evv~~Ma~~~erPIIFaLS 444 (464)
+|++|=+.+.... -+..+++.|.+..-+.|||.=|
T Consensus 64 --~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 64 --MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp --CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred --CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 9999987765421 1567899998776677888544
No 381
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=62.87 E-value=6 Score=39.77 Aligned_cols=33 Identities=27% Similarity=0.286 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
-+|||+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQ-----LGM-------KVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 479999999999999987764 253 689999873
No 382
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=62.81 E-value=8.8 Score=40.20 Aligned_cols=36 Identities=31% Similarity=0.412 Sum_probs=22.2
Q ss_pred CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
++++.+++|.|||.+|.++|..+.+ .|. +++++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~-----~G~-------~V~i~~R~ 396 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKE-----KGA-------KVVIANRT 396 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHH-----HCC--------CEEEESS
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 5778899999999777777776654 252 57888764
No 383
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=62.79 E-value=6.8 Score=37.44 Aligned_cols=37 Identities=27% Similarity=0.478 Sum_probs=28.4
Q ss_pred CCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
..+.-|+|+|||+||+..|..|.+. ..|+ ++.++|+.
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~---r~G~-------~V~viEk~ 99 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKN---RPDL-------KVCIIESS 99 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSS
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHh---CCCC-------eEEEEECC
Confidence 3466799999999999999988643 1354 58888875
No 384
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=62.65 E-value=21 Score=34.26 Aligned_cols=57 Identities=21% Similarity=0.220 Sum_probs=33.9
Q ss_pred CccchhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 012398 304 DIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (464)
Q Consensus 304 DiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~ 372 (464)
+.++...-.++..+.+.+..+. -.+++|+|.|||..|...+.++.. .|. +.++.+|+
T Consensus 137 ~~~aa~l~~~~~~~~~~~~~~~-~~g~~VlV~GaG~vG~~aiq~ak~-----~G~------~~vi~~~~ 193 (346)
T 4a2c_A 137 IEDGAFIEPITVGLHAFHLAQG-CENKNVIIIGAGTIGLLAIQCAVA-----LGA------KSVTAIDI 193 (346)
T ss_dssp GGGGGGHHHHHHHHHHHHHTTC-CTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred HHHHHhchHHHHHHHHHHHhcc-CCCCEEEEECCCCcchHHHHHHHH-----cCC------cEEEEEec
Confidence 3344444344444455554443 467899999999988776654433 353 45666664
No 385
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=62.58 E-value=6.9 Score=38.65 Aligned_cols=35 Identities=20% Similarity=0.320 Sum_probs=27.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
...|||+|||.+|+.+|-.|.+.. -| .++.++|+.
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~---pG-------~~V~vlE~~ 70 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLA---PG-------RSLLLVEEG 70 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHC---TT-------SCEEEECSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcC---CC-------CeEEEEeCC
Confidence 358999999999999999886520 04 358899975
No 386
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=62.48 E-value=7.1 Score=39.06 Aligned_cols=34 Identities=29% Similarity=0.421 Sum_probs=25.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+.-|||+|||-||+..|..|.++ .|. ++.+++++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~----~G~-------~V~VlE~~ 43 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQI----DGP-------SWMIVDSN 43 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----CCS-------CEEEEESS
T ss_pred CCCEEEECCcHHHHHHHHHHHhh----CCC-------CEEEEECC
Confidence 45799999999999999988653 353 45666654
No 387
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=62.45 E-value=6 Score=39.99 Aligned_cols=34 Identities=21% Similarity=0.182 Sum_probs=27.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+.+|||+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~liE~~~ 39 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQ-----LGF-------KTVCIEKNE 39 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCC
Confidence 3579999999999999998865 253 689999874
No 388
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=62.42 E-value=6.5 Score=40.57 Aligned_cols=36 Identities=22% Similarity=0.386 Sum_probs=27.6
Q ss_pred CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.-++..|+|+|||.||+..|-.|.. .|+ ++.++|++
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 43 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRL-----AGV-------EVVVLERL 43 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 3456789999999999999998865 365 36666654
No 389
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=62.39 E-value=5.8 Score=37.60 Aligned_cols=36 Identities=22% Similarity=0.251 Sum_probs=29.6
Q ss_pred CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+|++.+|||+|+|..|..-++.|+.+ | .++.++|.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECCC
Confidence 57889999999999999999988763 4 358888763
No 390
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=62.34 E-value=18 Score=34.72 Aligned_cols=48 Identities=21% Similarity=0.161 Sum_probs=32.4
Q ss_pred HHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 012398 313 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (464)
Q Consensus 313 LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~ 372 (464)
....+.+++..+.+ ..++++|+|||+.|...+.++..+ .| .+++.+|+
T Consensus 149 ~~ta~~~l~~~~~~-~g~~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~ 196 (348)
T 4eez_A 149 GVTTYKAIKVSGVK-PGDWQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEES
T ss_pred eeeEEeeecccCCC-CCCEEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEEC
Confidence 34456677766653 567899999999987766555432 23 46887776
No 391
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=62.26 E-value=6.7 Score=40.81 Aligned_cols=33 Identities=15% Similarity=0.297 Sum_probs=27.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
..||.|+|+|..|..+|..+.+. | .+++++|.+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~-----G-------~~V~~~d~~ 40 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI-----G-------HDVFCLDVD 40 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CceEEEECcCHHHHHHHHHHHhC-----C-------CEEEEEECC
Confidence 46999999999999999988753 4 358888874
No 392
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=62.17 E-value=23 Score=31.88 Aligned_cols=37 Identities=24% Similarity=0.283 Sum_probs=24.9
Q ss_pred CCCCcceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 325 GTLADQTFLFLGAG-EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 325 ~~l~d~riv~~GAG-sAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
..+++.+++|.||+ -.|.++|+.+++ .|. +++++|++
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~-----~G~-------~V~~~~r~ 47 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAA-----HGA-------SVVLLGRT 47 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHH-----CCC-------EEEEEecC
Confidence 35788999999984 445556665543 352 68888874
No 393
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=62.17 E-value=6.9 Score=39.60 Aligned_cols=35 Identities=31% Similarity=0.371 Sum_probs=27.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
+-.|+|+|||.||+..|..+.+ .|+ ++.++|++.-
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~-----~G~-------~V~liEk~~~ 38 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAK-----AKY-------NVLMADPKGE 38 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECTTSS
T ss_pred cceEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECCCC
Confidence 3579999999999999998864 353 6899996553
No 394
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=62.08 E-value=5.1 Score=40.42 Aligned_cols=33 Identities=21% Similarity=0.401 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+.+|+|+|||+||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 4689999999999999998864 24 369999986
No 395
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=62.01 E-value=6.3 Score=37.01 Aligned_cols=32 Identities=25% Similarity=0.396 Sum_probs=24.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
--|+|+|||+||+..|-.+.. .|+ ++.++|+.
T Consensus 7 yDVvIIGaGpAGlsAA~~lar-----~g~-------~v~lie~~ 38 (304)
T 4fk1_A 7 IDCAVIGAGPAGLNASLVLGR-----ARK-------QIALFDNN 38 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECS
T ss_pred cCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 458999999999998865543 353 58888874
No 396
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=61.96 E-value=6.2 Score=39.99 Aligned_cols=34 Identities=21% Similarity=0.247 Sum_probs=28.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+.+|||+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~-----~g-------~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQ-----LG-------LKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 5689999999999999998864 25 3689999873
No 397
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=61.93 E-value=6.6 Score=39.58 Aligned_cols=33 Identities=27% Similarity=0.236 Sum_probs=27.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ-----LGL-------STAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 3579999999999999987764 353 68899986
No 398
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=61.91 E-value=25 Score=34.13 Aligned_cols=99 Identities=15% Similarity=0.127 Sum_probs=57.6
Q ss_pred CcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHHH
Q 012398 328 ADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAV 405 (464)
Q Consensus 328 ~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v 405 (464)
+..+|+|.|| |-.|..+++.|++ .| .+++.+|++- .....+......+.. +..+..++.+++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~ 91 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKH-----EG-------HYVIASDWKK----NEHMTEDMFCDEFHLVDLRVMENCLKVT 91 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----CSSSCGGGTCSEEEECCTTSHHHHHHHH
T ss_pred cCCeEEEECCccHHHHHHHHHHHH-----CC-------CeEEEEECCC----ccchhhccCCceEEECCCCCHHHHHHHh
Confidence 3468999998 8888888888865 24 3688888742 111101111111111 111123577778
Q ss_pred hcCCCcEEEeccCCCCC--C---------------CHHHHHHHHcCCCCcEEEEcC
Q 012398 406 KAIKPTMLMGTSGVGKT--F---------------TKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 406 ~~vkptvLIG~S~~~g~--f---------------t~evv~~Ma~~~erPIIFaLS 444 (464)
+ ++|++|=+.+.... + +..+++.+.+..-+.|||.=|
T Consensus 92 ~--~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 92 E--GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp T--TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred C--CCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 7 49999988775431 1 335667776655567888543
No 399
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=61.82 E-value=6.5 Score=36.21 Aligned_cols=36 Identities=22% Similarity=0.291 Sum_probs=24.1
Q ss_pred CCCcceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 326 TLADQTFLFLGAG-EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 326 ~l~d~riv~~GAG-sAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
++++.+++|.||+ -.|.++|+.|.+ .|. +++++|++
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~-----~G~-------~V~~~~r~ 39 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLG-----EGA-------KVAFSDIN 39 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHH-----TTC-------EEEEECSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 5778899999974 445556665543 352 58888764
No 400
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=61.82 E-value=6 Score=38.74 Aligned_cols=35 Identities=14% Similarity=0.318 Sum_probs=26.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
..+|||+|||.||+..|..+.+ .|. .-+|.++|++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-----~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRK-----LDG-----ETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT-----TCS-----SSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHh-----hCC-----CCCEEEEECC
Confidence 3579999999999999998854 353 1357777764
No 401
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=61.72 E-value=5.7 Score=39.90 Aligned_cols=32 Identities=28% Similarity=0.266 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.+|||+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ-----LGQ-------KVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 479999999999999988764 253 68999986
No 402
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=61.72 E-value=9.3 Score=35.23 Aligned_cols=36 Identities=22% Similarity=0.294 Sum_probs=24.5
Q ss_pred CCCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 326 TLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 326 ~l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
++++.+++|.|| |-.|.++|+.+.+ .|. +++++|++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~-----~G~-------~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVA-----AGA-------RVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 467889999997 4455666666653 352 68888764
No 403
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=61.64 E-value=7.1 Score=39.41 Aligned_cols=34 Identities=24% Similarity=0.267 Sum_probs=27.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+.+|+|+|||.||+..|..+.+ .|+ ++.++|+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~-----~G~-------~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQ-----LGF-------NTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCC
Confidence 3579999999999999998865 353 699999853
No 404
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=61.55 E-value=10 Score=36.99 Aligned_cols=58 Identities=21% Similarity=0.143 Sum_probs=37.7
Q ss_pred cCccchhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 012398 303 DDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (464)
Q Consensus 303 DDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~ 372 (464)
++.++.....++..+.|++..+.+ ..++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 155 s~~~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 212 (363)
T 3m6i_A 155 SYENGAMLEPLSVALAGLQRAGVR-LGDPVLICGAGPIGLITMLCAKA-----AGA------CPLVITDI 212 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCC-TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEEES
T ss_pred CHHHHHhhhHHHHHHHHHHHcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 444555444556666777655543 46789999999888877765543 363 45787775
No 405
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=61.52 E-value=6.1 Score=45.36 Aligned_cols=38 Identities=24% Similarity=0.330 Sum_probs=33.6
Q ss_pred CCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
++|++.||+|+|+|..|.-||+.|+.+ |+ .+|.++|.+
T Consensus 23 ~rL~~s~VlIvG~GGlGseiak~La~a-----GV------g~itlvD~D 60 (1015)
T 3cmm_A 23 LKMQTSNVLILGLKGLGVEIAKNVVLA-----GV------KSMTVFDPE 60 (1015)
T ss_dssp HHHTTCEEEEECCSHHHHHHHHHHHHH-----CC------SEEEEECCS
T ss_pred HHHhcCEEEEECCChHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 367899999999999999999999875 64 689999986
No 406
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=61.49 E-value=9 Score=35.18 Aligned_cols=35 Identities=34% Similarity=0.397 Sum_probs=23.9
Q ss_pred CCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 327 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 327 l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+++.+++|.|| |-.|.++|+.|++ .|. +++++|++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~-----~G~-------~V~~~~r~ 37 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLAR-----AGA-------NIVLNGFG 37 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 56789999998 4556666666654 353 58888764
No 407
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=61.30 E-value=6.1 Score=40.50 Aligned_cols=33 Identities=24% Similarity=0.387 Sum_probs=27.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
.+|||+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAAR-----HN-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 579999999999999998865 24 3689999864
No 408
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=61.29 E-value=8 Score=39.11 Aligned_cols=35 Identities=20% Similarity=0.350 Sum_probs=28.5
Q ss_pred CCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
-...+|+|+|||.||+..|..|.++ |. ++.++++.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~-----G~-------~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA-----GH-------DVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT-----SC-------EEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEecc
Confidence 3467999999999999999988753 53 68888876
No 409
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=61.25 E-value=9.4 Score=35.63 Aligned_cols=37 Identities=22% Similarity=0.318 Sum_probs=25.4
Q ss_pred CCCCcceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 325 GTLADQTFLFLGAG-EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 325 ~~l~d~riv~~GAG-sAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.+++++++||-||+ -.|.++|+.+.+ .|. +++++|++
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~-----~G~-------~V~~~~r~ 44 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLAR-----AGA-------RVVLADLP 44 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEEECT
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHH-----CCC-------EEEEEcCC
Confidence 36788999999984 445556666554 352 68888874
No 410
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=61.25 E-value=6 Score=40.64 Aligned_cols=34 Identities=24% Similarity=0.432 Sum_probs=27.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+..|+|+|||.||+..|-.|.+ .|+ ++.++|++-
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~-----~G~-------~v~viEr~~ 38 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLAR-----QGV-------RVLVVERRP 38 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 5689999999999999988864 364 588888764
No 411
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=60.96 E-value=5.9 Score=41.56 Aligned_cols=36 Identities=14% Similarity=0.069 Sum_probs=28.4
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
.+.+|||+|||.||+..|..|.. +.|+ ++.++|+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 35689999999999999998862 1354 688999864
No 412
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=60.94 E-value=6.9 Score=39.56 Aligned_cols=33 Identities=24% Similarity=0.257 Sum_probs=26.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+.+|||+|||.||+..|..+.+. | .++.++|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 35799999999999999877653 4 369999984
No 413
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=60.88 E-value=9.3 Score=37.00 Aligned_cols=89 Identities=22% Similarity=0.353 Sum_probs=50.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 409 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vk 409 (464)
+||-|+|-|..|.++|..|+++ |. +++.+|+. .++.+.+.. .- .....++.|+++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-----G~-------~V~v~dr~----~~~~~~l~~---~G---~~~~~s~~e~~~~-- 61 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-----GY-------ELVVWNRT----ASKAEPLTK---LG---ATVVENAIDAITP-- 61 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEC-----------CTTTT---TT---CEECSSGGGGCCT--
T ss_pred CcEEEEecHHHHHHHHHHHHHC-----CC-------eEEEEeCC----HHHHHHHHH---cC---CeEeCCHHHHHhc--
Confidence 5899999999999999999763 54 57777762 322222211 11 1123577888876
Q ss_pred CcEEEeccCCCC----CCCHHHHHHHHcCCCCcEEEEcCC
Q 012398 410 PTMLMGTSGVGK----TFTKEVVEAMASFNEKPVIFALSN 445 (464)
Q Consensus 410 ptvLIG~S~~~g----~ft~evv~~Ma~~~erPIIFaLSN 445 (464)
.|++|=+-..+. ++..+++..+. +.-||.=+|+
T Consensus 62 ~dvvi~~l~~~~~~~~v~~~~~~~~~~---~~~iiid~sT 98 (297)
T 4gbj_A 62 GGIVFSVLADDAAVEELFSMELVEKLG---KDGVHVSMST 98 (297)
T ss_dssp TCEEEECCSSHHHHHHHSCHHHHHHHC---TTCEEEECSC
T ss_pred CCceeeeccchhhHHHHHHHHHHhhcC---CCeEEEECCC
Confidence 777774332221 23344455553 4457777775
No 414
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=60.84 E-value=8.3 Score=36.80 Aligned_cols=37 Identities=19% Similarity=0.158 Sum_probs=27.0
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhh-cCeEEEEcccC
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEA-RKKIWLVDSKG 374 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA-~~~i~lvD~~G 374 (464)
.|+|+|||.+|+.+|-.|.+. |.+. . ..++.++|+.-
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-----G~~~--~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-----YHSV--LQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----HTTT--SSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHh-----cccc--CCCceEEEEECCC
Confidence 689999999999999888653 3100 0 14799999873
No 415
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=60.83 E-value=6.9 Score=40.01 Aligned_cols=24 Identities=29% Similarity=0.408 Sum_probs=20.9
Q ss_pred CCcceEEEeCcchHHHHHHHHHHH
Q 012398 327 LADQTFLFLGAGEAGTGIAELIAL 350 (464)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~ 350 (464)
....+|+|+|||.||+..|..|.+
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~ 29 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQ 29 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHh
Confidence 345689999999999999999875
No 416
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=60.70 E-value=7.6 Score=39.59 Aligned_cols=36 Identities=14% Similarity=0.331 Sum_probs=28.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl 376 (464)
..+|+|+|||.||+..|..|.+. |. ++.+++++.-+
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~-----G~-------~V~vlE~~~~~ 39 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS-----GL-------NVVVLEARDRV 39 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCCCC
Confidence 35799999999999999998753 53 68888876544
No 417
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=60.55 E-value=17 Score=34.09 Aligned_cols=97 Identities=18% Similarity=0.157 Sum_probs=54.5
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHHHhc
Q 012398 330 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKA 407 (464)
Q Consensus 330 ~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~ 407 (464)
.||+|.|| |-.|..+++.|++ .| .+++.+|++. .....+......+.. +-.+..++.+++++
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~ 77 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRA-----AG-------HDLVLIHRPS----SQIQRLAYLEPECRVAEMLDHAGLERALRG 77 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEECTT----SCGGGGGGGCCEEEECCTTCHHHHHHHTTT
T ss_pred CEEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEecCh----HhhhhhccCCeEEEEecCCCHHHHHHHHcC
Confidence 38999996 8889999888865 24 3688888742 111112111111111 11112357777875
Q ss_pred CCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcC
Q 012398 408 IKPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 408 vkptvLIG~S~~~g~--------------ft~evv~~Ma~~~erPIIFaLS 444 (464)
+|++|=+.+..+. -+..+++.+.+..-+.|||.=|
T Consensus 78 --~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 78 --LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp --CSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred --CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 9999987765431 1346777777655567888533
No 418
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=60.54 E-value=11 Score=35.40 Aligned_cols=97 Identities=15% Similarity=0.115 Sum_probs=59.2
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhh----------h-hcC
Q 012398 329 DQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA----------H-EHA 396 (464)
Q Consensus 329 d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa----------~-~~~ 396 (464)
..+|+|.|| |-.|..+++.|++ .| -+++++|+.. . ........+. . +-.
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~~~~~Dl~ 65 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLA-----HG-------YDVVIADNLV----N---SKREAIARIEKITGKTPAFHETDVS 65 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS----S---SCTHHHHHHHHHHSCCCEEECCCTT
T ss_pred CcEEEEecCCcHHHHHHHHHHHH-----CC-------CcEEEEecCC----c---chHHHHHHHHhhcCCCceEEEeecC
Confidence 468999996 7788888887765 35 3688887641 1 1111111111 0 111
Q ss_pred CCCCHHHHHhcCCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 012398 397 PIKSLLDAVKAIKPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 397 ~~~~L~e~v~~vkptvLIG~S~~~g~----------------ft~evv~~Ma~~~erPIIFaLS 444 (464)
+..++.++++..++|++|=+.+.... -+..+++.|.+..-+.|||.=|
T Consensus 66 d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 66 DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 11357788886679999987765421 1446788888776678998544
No 419
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=60.45 E-value=6.8 Score=40.36 Aligned_cols=40 Identities=30% Similarity=0.374 Sum_probs=29.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHH-------hcCCChhhhcCeEEEEcccCc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSK-------QTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~-------~~G~s~~eA~~~i~lvD~~GL 375 (464)
..+|||+|||.||...|-.|...+-. ..|+ ++.++++.-.
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~-------~V~liE~~~~ 53 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKL-------NITLIESPDV 53 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSC-------EEEEEECSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCC-------eEEEEeCCCC
Confidence 46899999999999999998764310 0243 6889998643
No 420
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=60.44 E-value=7.3 Score=39.96 Aligned_cols=34 Identities=21% Similarity=0.426 Sum_probs=27.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
.-.|+|+|||.+|+++|..+.. .|+ ++.++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 4579999999999999998865 364 588999864
No 421
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=60.43 E-value=4.3 Score=44.57 Aligned_cols=36 Identities=25% Similarity=0.410 Sum_probs=31.4
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+=
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d~ 445 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMDT 445 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCCe
Confidence 788999999999999999998764 64 6899999873
No 422
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=60.34 E-value=5 Score=41.48 Aligned_cols=22 Identities=27% Similarity=0.345 Sum_probs=19.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHH
Q 012398 331 TFLFLGAGEAGTGIAELIALEM 352 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~ 352 (464)
-||++|||.+|+++|-.|.+..
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~ 62 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDAL 62 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHH
T ss_pred cEEEEcccHHHHHHHHHHHhcC
Confidence 4899999999999998887654
No 423
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=60.31 E-value=7.7 Score=38.13 Aligned_cols=38 Identities=18% Similarity=0.260 Sum_probs=27.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.+|+|+|||.+|+..|..|.++ |... ....++.++++.
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~-----G~~~-~~~~~V~vlEa~ 43 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKE-----IKEK-NLPLELTLVEAS 43 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-----HTTT-TCSEEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHHh-----cccc-CCCCCEEEEECC
Confidence 5899999999999999999875 3100 011468888876
No 424
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=60.21 E-value=8 Score=39.34 Aligned_cols=33 Identities=18% Similarity=0.377 Sum_probs=27.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+..|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~-----~G~-------~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGA-----LGK-------RVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----CcC-------EEEEEeCC
Confidence 4689999999999999998865 353 68899984
No 425
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=60.01 E-value=6.7 Score=40.06 Aligned_cols=36 Identities=25% Similarity=0.415 Sum_probs=27.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
.+|||+|||.||+..|..+.+.- ..| .++.++|+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~--~~G-------~~V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSH--PET-------TQVTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC--TTT-------EEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--CCc-------CEEEEEeCCC
Confidence 47999999999999999886530 003 3799999874
No 426
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=59.97 E-value=8.4 Score=38.63 Aligned_cols=34 Identities=12% Similarity=0.154 Sum_probs=27.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+|||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH---PD-------ADVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCC
Confidence 6999999999999999987631 13 4788999875
No 427
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=59.82 E-value=8.6 Score=38.52 Aligned_cols=35 Identities=14% Similarity=0.186 Sum_probs=27.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
+|||+|||.||+..|..+.+.. .| .++.++|+...
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~ 36 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLH---PD-------AEIQWYEKGDF 36 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC---TT-------SEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHHhC---cC-------CeEEEEECCCc
Confidence 6999999999999999887531 12 47999998653
No 428
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=59.82 E-value=10 Score=34.93 Aligned_cols=88 Identities=14% Similarity=0.195 Sum_probs=55.5
Q ss_pred CCCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHH
Q 012398 326 TLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDA 404 (464)
Q Consensus 326 ~l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 404 (464)
+-...+|+|.|| |-.|..+++.|++ .| .+++.+|++ ..| +.+ ..++.++
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~D-l~d-----------~~~~~~~ 58 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKG-----KN-------VEVIPTDVQ------DLD-ITN-----------VLAVNKF 58 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTT-----SS-------EEEEEECTT------TCC-TTC-----------HHHHHHH
T ss_pred ccccceEEEECCCChHHHHHHHHHHh-----CC-------CeEEeccCc------cCC-CCC-----------HHHHHHH
Confidence 345678999987 8888888887764 24 368888774 111 221 1246777
Q ss_pred HhcCCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 012398 405 VKAIKPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 405 v~~vkptvLIG~S~~~g~----------------ft~evv~~Ma~~~erPIIFaLS 444 (464)
++.+++|++|=+.+.... -+..+++.+.+..- .|||.=|
T Consensus 59 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS 113 (292)
T 1vl0_A 59 FNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQIST 113 (292)
T ss_dssp HHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred HHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEech
Confidence 776679999988775431 03566777766544 7888544
No 429
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=59.76 E-value=8 Score=38.89 Aligned_cols=32 Identities=16% Similarity=0.324 Sum_probs=25.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.+|+|+|||.||+..|..|.+. |. ++.++++.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~-----g~-------~v~v~E~~ 71 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA-----GF-------KTLLLEAR 71 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------CEEEEeCC
Confidence 5899999999999999988753 53 57777765
No 430
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=59.75 E-value=19 Score=34.94 Aligned_cols=56 Identities=16% Similarity=0.186 Sum_probs=36.1
Q ss_pred chhHHHHHHHHHHHHHhCCCCCc--ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 307 GTASVVLAGILSALKLVGGTLAD--QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 307 GTaaV~LAgll~Alk~~g~~l~d--~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
++-...++..+.|+.-.+.--.+ ++|+|.|| |..|..+++++.. .|. ++++.+|+.
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICGT 195 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeCC
Confidence 34344555566677333333346 89999998 9888888877654 352 368877763
No 431
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=59.65 E-value=8.6 Score=38.76 Aligned_cols=33 Identities=24% Similarity=0.186 Sum_probs=27.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+-.|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-----G~-------~V~liEk~ 35 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-----GL-------KTALIEKY 35 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 35799999999999999988653 53 68899986
No 432
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=59.42 E-value=6.4 Score=40.41 Aligned_cols=35 Identities=17% Similarity=0.492 Sum_probs=27.8
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
.+.+|||+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liE~~~ 40 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAM-----RGH-------RVLLLEREA 40 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEccCC
Confidence 34689999999999999987754 364 588888874
No 433
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=59.41 E-value=10 Score=38.97 Aligned_cols=32 Identities=22% Similarity=0.244 Sum_probs=26.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVD 371 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD 371 (464)
+.+|+|+|||.||+..|..+.+. .|. ++.++|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~----~G~-------~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATL----YGK-------RVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HCC-------CEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHh----cCC-------eEEEEe
Confidence 46899999999999999988751 153 689999
No 434
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=59.36 E-value=5.7 Score=39.11 Aligned_cols=34 Identities=18% Similarity=0.403 Sum_probs=26.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
..++||+|+|.||+..|..+.+ .| ++.++|+.-.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~ 41 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPV 41 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCC
Confidence 4689999999999999998843 12 7899998754
No 435
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=59.28 E-value=7.7 Score=36.57 Aligned_cols=36 Identities=22% Similarity=0.375 Sum_probs=27.3
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
.+..|||+|||.||+..|..+.+. .|+ ++.++|+..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~----~G~-------~V~viEk~~ 73 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKN----PNV-------QVAIIEQSV 73 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTS----TTS-------CEEEEESSS
T ss_pred cccCEEEECccHHHHHHHHHHHHc----CCC-------eEEEEECCC
Confidence 346899999999999999887541 143 588888764
No 436
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=59.08 E-value=9.2 Score=39.04 Aligned_cols=25 Identities=32% Similarity=0.534 Sum_probs=22.3
Q ss_pred CCCcceEEEeCcchHHHHHHHHHHH
Q 012398 326 TLADQTFLFLGAGEAGTGIAELIAL 350 (464)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~ 350 (464)
.++.+||+|+|.|.+|+++|++|.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~ 30 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAK 30 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHH
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHh
Confidence 4678999999999999999998875
No 437
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=59.08 E-value=61 Score=32.96 Aligned_cols=115 Identities=15% Similarity=0.150 Sum_probs=76.5
Q ss_pred CccHHHHHHHHcCCCceee--cCccchhHHHHHHHHHHHHHhCCC-CCcce--EEEeCc----chHHHHHHHHHHHHHHH
Q 012398 284 NHNAFELLSKYSSSHLVFN--DDIQGTASVVLAGILSALKLVGGT-LADQT--FLFLGA----GEAGTGIAELIALEMSK 354 (464)
Q Consensus 284 ~~~af~iL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Alk~~g~~-l~d~r--iv~~GA----GsAg~GiA~ll~~a~~~ 354 (464)
...+.+.+.+|- ++||.| ||.| -+=+||=++.-.+..|++ |++.| |.++|- | --+|+-++.++.+
T Consensus 145 ~~~~~~~lA~~~-~vPVINag~g~H--PtQaLaDl~TI~E~~g~~~l~glkvvva~vGDl~~~~---nrva~Sl~~~~~~ 218 (359)
T 1zq6_A 145 EDQVLKSFAKYS-PVPVINMETITH--PCQELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLN---TAVANSALTIATR 218 (359)
T ss_dssp TCHHHHHHHHHC-SSCEEESSSSCC--HHHHHHHHHHHHHHHTSSCCTTCEEEEEECCCSSCCC---SHHHHHHHHHHHH
T ss_pred chHHHHHHHHhC-CCCEEeCCCCCC--cHHHHHHHHHHHHHhCCCcccCCeeEEEEEecccccc---cchHHHHHHHHHH
Confidence 345566666664 699999 7774 445677777777777765 99999 889998 6 3467777777665
Q ss_pred hcCCChhhhcCeEEEEccc-CcccCCCccCCchhchhhhhhc-C---CCCCHHHHHhcCCCcEEEecc
Q 012398 355 QTKAPIEEARKKIWLVDSK-GLIVSSRKESLQHFKKPWAHEH-A---PIKSLLDAVKAIKPTMLMGTS 417 (464)
Q Consensus 355 ~~G~s~~eA~~~i~lvD~~-GLl~~~r~~~l~~~k~~fa~~~-~---~~~~L~e~v~~vkptvLIG~S 417 (464)
.|+ +|.++-.+ |+.-.. .+...-+.+|+.. . ...++.|||++ +||+.-..
T Consensus 219 -~G~-------~v~~~~P~~~~~~~~---~~~~~~~~~a~~~g~~v~~~~d~~eav~~--aDvVyt~~ 273 (359)
T 1zq6_A 219 -MGM-------DVTLLCPTPDYILDE---RYMDWAAQNVAESGGSLQVSHDIDSAYAG--ADVVYAKS 273 (359)
T ss_dssp -TTC-------EEEEECSSGGGCCCH---HHHHHHHHHHHHHSCEEEEECCHHHHHTT--CSEEEEEC
T ss_pred -cCC-------EEEEEcCccccCCCH---HHHHHHHHHHHHcCCeEEEECCHHHHhcC--CCEEEECC
Confidence 464 68888887 774321 1211122344332 1 13689999998 99998765
No 438
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=58.97 E-value=50 Score=32.79 Aligned_cols=170 Identities=12% Similarity=0.146 Sum_probs=99.7
Q ss_pred HHHHHHHHHHhcCCCeeeeeecCCCccHHHHHHHHcCCCceee--cCccchhHHHHHHHHHHHHHhCCCCC-cceEEEeC
Q 012398 260 LQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFN--DDIQGTASVVLAGILSALKLVGGTLA-DQTFLFLG 336 (464)
Q Consensus 260 idefv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Alk~~g~~l~-d~riv~~G 336 (464)
+.+.++.+.. | .++ |-+--++ ..+.+.+.+|- ++||.| || +-=-+=+||=++.-.+.. .+++ +.||+++|
T Consensus 81 l~DTarvls~-~-~D~-iviR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~-g~l~~gl~va~vG 153 (307)
T 3tpf_A 81 VKDTARVIGA-M-VDF-VMMRVNK-HETLLEFARYS-KAPVINALSE-LYHPTQVLGDLFTIKEWN-KMQNGIAKVAFIG 153 (307)
T ss_dssp HHHHHHHHHH-H-SSE-EEEECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHTT-CCGGGCCEEEEES
T ss_pred HHHHHHHHHH-h-CCE-EEEecCC-hHHHHHHHHhC-CCCEEeCCCC-CcCcHHHHHHHHHHHHHh-CCCCCCCEEEEEc
Confidence 3445554443 5 333 4455554 34455555654 699998 54 333345666666655544 4799 99999999
Q ss_pred cchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcC----CCCCHHHHHhcCCCcE
Q 012398 337 AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHA----PIKSLLDAVKAIKPTM 412 (464)
Q Consensus 337 AGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~----~~~~L~e~v~~vkptv 412 (464)
-+. -+|+-++.++.+ .|+ +|.++-.+|+.... .+-..-+.+|+... ...++.|||++ +||
T Consensus 154 D~~---~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDv 217 (307)
T 3tpf_A 154 DSN---NMCNSWLITAAI-LGF-------EISIAMPKNYKISP---EIWEFAMKQALISGAKISLGYDKFEALKD--KDV 217 (307)
T ss_dssp CSS---HHHHHHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHTCEEEEESCHHHHHTT--CSE
T ss_pred CCC---ccHHHHHHHHHH-cCC-------EEEEECCCccCCCH---HHHHHHHHHHHHcCCeEEEEcCHHHHhcC--CCE
Confidence 974 478888777766 464 68888887774321 11111223443321 12689999998 999
Q ss_pred EEeccC--C--------------CCCCCHHHHHHHHcCCCCcEEEEcCCCCC-CCCCCHHH
Q 012398 413 LMGTSG--V--------------GKTFTKEVVEAMASFNEKPVIFALSNPTS-QSECTAEE 456 (464)
Q Consensus 413 LIG~S~--~--------------~g~ft~evv~~Ma~~~erPIIFaLSNPt~-~~E~tped 456 (464)
+.-..= . +=-+|++.++.+. ++-||+-. =|.. --|++.|-
T Consensus 218 vyt~~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~---~~ai~mH~-lPa~Rg~EI~~eV 274 (307)
T 3tpf_A 218 VITDTWVSMGEENEKERKIKEFEGFMIDEKAMSVAN---KDAILLHC-LPAYRGYEVSEEI 274 (307)
T ss_dssp EEECCSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSC---TTCEEEEC-SCCCBTTTBCHHH
T ss_pred EEecCcccCCchhhHHHHHHHhcccccCHHHHHhcC---CCcEEECC-CCCCCCceeCHHH
Confidence 976541 0 1125777776542 55566632 2432 26887753
No 439
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=58.88 E-value=6.1 Score=43.39 Aligned_cols=32 Identities=25% Similarity=0.466 Sum_probs=25.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.||.|+|+|..|.+||..+..+ |. +++++|.+
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~a-----G~-------~V~l~D~~ 344 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILS-----NY-------PVILKEVN 344 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSS
T ss_pred cEEEEEcCCHhhHHHHHHHHhC-----CC-------EEEEEECC
Confidence 4799999999999999998753 54 47777764
No 440
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=58.84 E-value=24 Score=32.21 Aligned_cols=77 Identities=14% Similarity=0.180 Sum_probs=41.3
Q ss_pred CCCCCcceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHH
Q 012398 324 GGTLADQTFLFLGAG-EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLL 402 (464)
Q Consensus 324 g~~l~d~riv~~GAG-sAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~ 402 (464)
..++++.+++|.||+ -.|.++|+.|.+ .|. +++++|++- ++ +.... .+.-+-.+..++.
T Consensus 10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~-----~G~-------~V~~~~r~~----~~---~~~~~-~~~~D~~~~~~~~ 69 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNRGIGLAIAQRLAA-----DGH-------KVAVTHRGS----GA---PKGLF-GVEVDVTDSDAVD 69 (247)
T ss_dssp CCCCCCCEEEETTTTSHHHHHHHHHHHH-----TTC-------EEEEEESSS----CC---CTTSE-EEECCTTCHHHHH
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHHHH-----CCC-------EEEEEeCCh----HH---HHHhc-CeeccCCCHHHHH
Confidence 346788899999974 445555555543 352 688888741 11 11111 1111111112345
Q ss_pred HHHhcC-----CCcEEEeccCCC
Q 012398 403 DAVKAI-----KPTMLMGTSGVG 420 (464)
Q Consensus 403 e~v~~v-----kptvLIG~S~~~ 420 (464)
++++.+ ++|+||=..+..
T Consensus 70 ~~~~~~~~~~g~id~lv~~Ag~~ 92 (247)
T 1uzm_A 70 RAFTAVEEHQGPVEVLVSNAGLS 92 (247)
T ss_dssp HHHHHHHHHHSSCSEEEEECSCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCC
Confidence 555543 689999777654
No 441
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=58.62 E-value=24 Score=33.94 Aligned_cols=77 Identities=16% Similarity=0.347 Sum_probs=47.4
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcCC
Q 012398 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 409 (464)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~vk 409 (464)
||+|.|| |-.|..+++.|++. |. -+++.+|+. ....+|.+++++
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~-----g~------~~v~~~d~~----------------------~d~~~l~~~~~~-- 46 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTST-----TD------HHIFEVHRQ----------------------TKEEELESALLK-- 46 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH-----CC------CEEEECCTT----------------------CCHHHHHHHHHH--
T ss_pred EEEEECCCCHHHHHHHHHHHhC-----CC------CEEEEECCC----------------------CCHHHHHHHhcc--
Confidence 7999995 88999999888763 42 257766664 011235666665
Q ss_pred CcEEEeccCCCC------------CCCHHHHHHHHcCCCC-cEEEE
Q 012398 410 PTMLMGTSGVGK------------TFTKEVVEAMASFNEK-PVIFA 442 (464)
Q Consensus 410 ptvLIG~S~~~g------------~ft~evv~~Ma~~~er-PIIFa 442 (464)
+|++|=+.+... ..+..+++.+.+..-+ .+||.
T Consensus 47 ~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~ 92 (369)
T 3st7_A 47 ADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLS 92 (369)
T ss_dssp CSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEE
T ss_pred CCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 788775554321 1245677777655444 56663
No 442
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=58.59 E-value=17 Score=35.23 Aligned_cols=44 Identities=23% Similarity=0.159 Sum_probs=28.0
Q ss_pred ccchhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHH
Q 012398 305 IQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIA 349 (464)
Q Consensus 305 iQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~ 349 (464)
.++.....++..+.|++..+.+ ..++|+|.|||..|...+.+..
T Consensus 146 ~~aa~~~~~~ta~~al~~~~~~-~g~~VlV~GaG~vG~~a~qla~ 189 (352)
T 1e3j_A 146 EEGALLEPLSVGVHACRRAGVQ-LGTTVLVIGAGPIGLVSVLAAK 189 (352)
T ss_dssp HHHHTHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHH
T ss_pred HHHHhhchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHH
Confidence 3443333455556667655433 4689999999988877776554
No 443
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=58.57 E-value=20 Score=38.36 Aligned_cols=26 Identities=15% Similarity=0.257 Sum_probs=23.2
Q ss_pred CCc-ceEEEeCcchHHHHHHHHHHHHH
Q 012398 327 LAD-QTFLFLGAGEAGTGIAELIALEM 352 (464)
Q Consensus 327 l~d-~riv~~GAGsAg~GiA~ll~~a~ 352 (464)
|++ .||.|+|.|+.|-++|.-|.+++
T Consensus 51 L~GiKkIgIIGlGsMG~AmA~nLr~s~ 77 (525)
T 3fr7_A 51 FKGIKQIGVIGWGSQGPAQAQNLRDSL 77 (525)
T ss_dssp TTTCSEEEEECCTTHHHHHHHHHHHHH
T ss_pred hcCCCEEEEEeEhHHHHHHHHHHHhcc
Confidence 566 79999999999999999998864
No 444
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=58.47 E-value=11 Score=37.90 Aligned_cols=115 Identities=17% Similarity=0.159 Sum_probs=64.6
Q ss_pred CCCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCc--cCCchhchhhhhhcCCCCCHH
Q 012398 326 TLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRK--ESLQHFKKPWAHEHAPIKSLL 402 (464)
Q Consensus 326 ~l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~--~~l~~~k~~fa~~~~~~~~L~ 402 (464)
..+-.||.|+|| |..|..+|-+|... .=+.... ...+.|+|...-+..-.. -+|.+---+.........+..
T Consensus 21 s~~~vKVaViGAaG~IG~~la~~la~~----~l~~~~~-~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~ 95 (345)
T 4h7p_A 21 SMSAVKVAVTGAAGQIGYALVPLIARG----ALLGPTT-PVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPR 95 (345)
T ss_dssp -CCCEEEEEESTTSHHHHHHHHHHHHT----TTTCTTC-CEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHH
T ss_pred CCCCCEEEEECcCcHHHHHHHHHHHhc----cccCCCC-ccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChH
Confidence 456679999997 99999988877652 0111111 136889997421110000 012211111111111124788
Q ss_pred HHHhcCCCcEEEeccCCC---CC-----------CCHHHHHHHHcCC-CCcEEEEcCCCC
Q 012398 403 DAVKAIKPTMLMGTSGVG---KT-----------FTKEVVEAMASFN-EKPVIFALSNPT 447 (464)
Q Consensus 403 e~v~~vkptvLIG~S~~~---g~-----------ft~evv~~Ma~~~-erPIIFaLSNPt 447 (464)
+++++ +|++|=+.+.+ |- +=+++.+.+++++ +.-+|+-.|||.
T Consensus 96 ~a~~~--advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPv 153 (345)
T 4h7p_A 96 VAFDG--VAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPA 153 (345)
T ss_dssp HHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred HHhCC--CCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCc
Confidence 99998 99998555443 31 2245566677765 567888899996
No 445
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=58.23 E-value=18 Score=35.56 Aligned_cols=45 Identities=22% Similarity=0.226 Sum_probs=29.2
Q ss_pred HHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 012398 317 LSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (464)
Q Consensus 317 l~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~ 372 (464)
+.|+.-...--.+++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 182 ~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 182 LGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDI 226 (378)
T ss_dssp HHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECS
T ss_pred HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 3344333333457899999999888877766543 253 47888874
No 446
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=58.21 E-value=8 Score=38.98 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=27.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
..|+|+|||.||+..|-.+.+ .|. ++.++|+...
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~-----~G~-------~V~llEk~~~ 60 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAE-----EGA-------NVLLLDKGNK 60 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------CEEEEECCCC
Confidence 579999999999999988764 353 6899998653
No 447
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=58.14 E-value=10 Score=38.72 Aligned_cols=35 Identities=17% Similarity=0.285 Sum_probs=28.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
..+|+|+|+|.||+..|..+... |- ..++.++|+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~vie~~ 40 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH-----HS-----RAHVDIYEKQ 40 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CS-----SCEEEEECSS
T ss_pred CceEEEECcCHHHHHHHHHHHhc-----CC-----CCCEEEEeCC
Confidence 35899999999999999998753 41 2479999986
No 448
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=58.11 E-value=8.3 Score=38.13 Aligned_cols=35 Identities=14% Similarity=0.317 Sum_probs=27.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
+.+|+|+|||.||+..|..|.+. |. ++.+++++.-
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~~~ 39 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKA-----GL-------SVAVIEARDR 39 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEECCCC
Confidence 46899999999999999988652 53 5788887643
No 449
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=58.05 E-value=13 Score=37.06 Aligned_cols=37 Identities=16% Similarity=0.210 Sum_probs=28.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
..+|+|+|||.+|+.+|..|.+. |- ..++.++++..-
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-----g~-----~~~v~v~E~~~~ 40 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-----FP-----DLNITLLEAGER 40 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-----CT-----TSEEEEECSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHh-----CC-----CCCEEEEECCCC
Confidence 46899999999999999998764 41 147888988643
No 450
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=57.99 E-value=8.9 Score=38.95 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=27.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+.+|||+|||.||+..|..+.+ .|. ++.++|++.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~~ 39 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAAD-----EGL-------KVAIVERYK 39 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCC
Confidence 4579999999999999987754 353 589999853
No 451
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=57.98 E-value=9 Score=41.61 Aligned_cols=35 Identities=23% Similarity=0.436 Sum_probs=28.6
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
...+|||+|||.||+..|..+.. .|. ++.++|+..
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~-----~G~-------~Vtlie~~~ 422 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLME-----SGY-------TVHLTDTAE 422 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 35689999999999999998865 253 599999864
No 452
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=57.98 E-value=5.9 Score=37.65 Aligned_cols=33 Identities=18% Similarity=0.505 Sum_probs=27.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
...|+|+|||.+|+.+|-.|. . |. ++.++|+..
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~-----G~-------~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-A-----HG-------RVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-T-----TS-------CEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-C-----CC-------CEEEEECCC
Confidence 568999999999999998875 1 53 688999874
No 453
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=57.94 E-value=7.6 Score=35.59 Aligned_cols=77 Identities=25% Similarity=0.343 Sum_probs=43.5
Q ss_pred CCCCcceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-------hcC
Q 012398 325 GTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-------EHA 396 (464)
Q Consensus 325 ~~l~d~riv~~GAGs-Ag~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-------~~~ 396 (464)
.++++.+++|.||+. .|.++|+.|++ .| -+++++|++- +.+....+.+.. +-.
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~-----~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~ 65 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAK-----GG-------AKVVIVDRDK-------AGAERVAGEIGDAALAVAADIS 65 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCH-------HHHHHHHHHHCTTEEEEECCTT
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHH-----CC-------CEEEEEcCCH-------HHHHHHHHHhCCceEEEEecCC
Confidence 467889999999853 46666666654 35 2688888741 112221111110 111
Q ss_pred CCCCHHHHHhcC-----CCcEEEeccCCC
Q 012398 397 PIKSLLDAVKAI-----KPTMLMGTSGVG 420 (464)
Q Consensus 397 ~~~~L~e~v~~v-----kptvLIG~S~~~ 420 (464)
...++.++++.+ ++|+||=..+..
T Consensus 66 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 66 KEADVDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 112455566654 799999776643
No 454
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=57.92 E-value=24 Score=32.33 Aligned_cols=36 Identities=25% Similarity=0.434 Sum_probs=24.4
Q ss_pred CCCcceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 326 TLADQTFLFLGAG-EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 326 ~l~d~riv~~GAG-sAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
++++.+++|-||+ -.|.++|+.+.+ .|. +++++|++
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~-----~G~-------~V~~~~r~ 40 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQ-----EGA-------TVLGLDLK 40 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 5788899999984 345556665543 353 68888874
No 455
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=57.88 E-value=5.7 Score=39.92 Aligned_cols=34 Identities=38% Similarity=0.455 Sum_probs=26.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+.+|+|+|||.||+..|..|.+ .|+ ++.++|+.-
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~-----~G~-------~V~vlE~~~ 39 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSR-----RGL-------KILLVDSKP 39 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSS-----SSC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 3579999999999999988754 354 477777653
No 456
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=57.51 E-value=1.2 Score=42.17 Aligned_cols=21 Identities=19% Similarity=0.200 Sum_probs=17.0
Q ss_pred ceEEEeCcchHHHHHHHHHHH
Q 012398 330 QTFLFLGAGEAGTGIAELIAL 350 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~ 350 (464)
.||.|+|+|..|.++|+.+..
T Consensus 3 m~I~iIG~G~mG~~la~~l~~ 23 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKD 23 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-
T ss_pred ceEEEEeCCHHHHHHHHHHHH
Confidence 379999999999999887654
No 457
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=57.51 E-value=7.4 Score=39.04 Aligned_cols=34 Identities=24% Similarity=0.236 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~-----~G~-------~V~vlEk~~ 37 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAK-----LGK-------SVTVFDNGK 37 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 4579999999999999988765 353 588999865
No 458
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=57.28 E-value=9.6 Score=37.30 Aligned_cols=36 Identities=17% Similarity=0.288 Sum_probs=27.2
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+..+|+|+|||.||+..|..|.+. |. .++.++++..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~-----g~------~~v~v~E~~~ 40 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA-----GF------HDYTILERTD 40 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-----CC------CcEEEEECCC
Confidence 456899999999999999988652 41 3577777653
No 459
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=57.21 E-value=8.4 Score=38.29 Aligned_cols=35 Identities=29% Similarity=0.459 Sum_probs=27.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
.+|+|+|||.||+..|..|.+ .|.+ .++.++++..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~-----~G~~-----~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSR-----APCP-----PKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHT-----SSSC-----CEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHh-----CCCC-----CcEEEEeCCC
Confidence 479999999999999998865 3531 2788888754
No 460
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=56.99 E-value=7.9 Score=38.84 Aligned_cols=22 Identities=23% Similarity=0.315 Sum_probs=19.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHH
Q 012398 330 QTFLFLGAGEAGTGIAELIALE 351 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a 351 (464)
.+|||+|||-+|+..|-.|.++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~ 23 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA 23 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHHC
Confidence 4799999999999999888653
No 461
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=56.94 E-value=5.7 Score=36.98 Aligned_cols=34 Identities=26% Similarity=0.323 Sum_probs=25.9
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
...+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR-----ANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEccC
Confidence 34689999999999999998864 253 46677753
No 462
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=56.87 E-value=8.5 Score=38.92 Aligned_cols=35 Identities=29% Similarity=0.372 Sum_probs=27.9
Q ss_pred CcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
.+.+|+|+|||.||+..|..+.+ .|. ++.++|+.-
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~-----~G~-------~V~liE~~~ 53 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAE-----LGA-------RAAVVESHK 53 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEecCC
Confidence 35689999999999999998865 353 588999653
No 463
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=56.61 E-value=8.8 Score=39.95 Aligned_cols=34 Identities=24% Similarity=0.384 Sum_probs=27.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+..|+|+|||.||+..|-.|.. .|+ ++.++|+..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~-----~G~-------~V~vlEr~~ 59 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAH-----RQV-------GHLVVEQTD 59 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 4689999999999999998865 365 477888753
No 464
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=56.60 E-value=40 Score=30.84 Aligned_cols=76 Identities=14% Similarity=0.146 Sum_probs=43.1
Q ss_pred CCCCcceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHH
Q 012398 325 GTLADQTFLFLGAG-EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLD 403 (464)
Q Consensus 325 ~~l~d~riv~~GAG-sAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e 403 (464)
..+++.+++|.||+ -.|.++|+.|++ .|. +++++|++- ...+.+. ...+.-+- ..++.+
T Consensus 15 ~~~~~k~vlVTGas~gIG~~~a~~l~~-----~G~-------~V~~~~r~~----~~~~~~~--~~~~~~D~--~~~~~~ 74 (249)
T 1o5i_A 15 LGIRDKGVLVLAASRGIGRAVADVLSQ-----EGA-------EVTICARNE----ELLKRSG--HRYVVCDL--RKDLDL 74 (249)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HHHHHTC--SEEEECCT--TTCHHH
T ss_pred hccCCCEEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEcCCH----HHHHhhC--CeEEEeeH--HHHHHH
Confidence 46788999999984 455566666653 352 688888753 0000111 11111111 235666
Q ss_pred HHhcC-CCcEEEeccCCC
Q 012398 404 AVKAI-KPTMLMGTSGVG 420 (464)
Q Consensus 404 ~v~~v-kptvLIG~S~~~ 420 (464)
+++.+ ++|+||=..+..
T Consensus 75 ~~~~~~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 75 LFEKVKEVDILVLNAGGP 92 (249)
T ss_dssp HHHHSCCCSEEEECCCCC
T ss_pred HHHHhcCCCEEEECCCCC
Confidence 66665 799999776643
No 465
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=56.51 E-value=13 Score=37.42 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=27.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
..+|+|+|||.+|+..|..|.+. | .++.++++..
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~-----g-------~~v~vlE~~~ 66 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGA-----G-------HQVTVLEASE 66 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHH-----T-------CEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECCC
Confidence 46899999999999999988753 5 3577787753
No 466
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=56.51 E-value=6 Score=39.37 Aligned_cols=153 Identities=14% Similarity=0.186 Sum_probs=76.8
Q ss_pred CCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeeccCCCCCCcccccchhhhHHhhhCCCCCCceeeEEeecCCCc
Q 012398 155 PQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGLRPSACLPITIDVGTNN 234 (464)
Q Consensus 155 p~gly~s~~d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG~~gm~I~~GKl~Ly~a~gGI~P~~~lPV~LDvgTnn 234 (464)
|||..++--|-++ |...+..+++||||.++=| |.--+ .. =||. .+|+.+-++ .
T Consensus 16 ~~~~~~~~~~~~~------~~~~~~Mki~IvTDSt~dL------------~~e~~---~~-~~I~---vvPL~v~~~--~ 68 (315)
T 3fys_A 16 PRGSHMASMTGGQ------QMGRGSMNIAVVTDSTAYI------------PKEMR---EQ-HQIH---MIPLQVVFR--E 68 (315)
T ss_dssp ------------------------CCCEEEEEEGGGCC------------CHHHH---HH-HTEE---EECCEEECS--S
T ss_pred cCccccccccchh------hhCcCCCcEEEEEECCCCC------------CHHHH---Hh-CCeE---EEeEEEEEC--C
Confidence 6665444333332 3333345799999998633 22111 11 2576 888888875 3
Q ss_pred cccccCccccccccCCCChhhHHHHHHHHHHHHHH--hcCCCeeeeeecCCCccHHHHHHHHc---C---CCceeecCcc
Q 012398 235 EQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQ--NYGEKVLIQFEDFANHNAFELLSKYS---S---SHLVFNDDIQ 306 (464)
Q Consensus 235 e~Ll~Dp~YlG~r~~R~~g~~y~~~idefv~av~~--~fGp~~lIq~EDf~~~~af~iL~ryr---~---~~~~FnDDiQ 306 (464)
++..++. -++ .+||.+.++. .. |. =+.|+--++++-|+ + ++-+++
T Consensus 69 ~~Y~D~~--------di~-------~~efy~~m~~~~~~-p~-------TSqPs~~~~~~~fe~l~~~~~~Ii~I~---- 121 (315)
T 3fys_A 69 ETYREEI--------ELD-------WKSFYEEVKKHNEL-PT-------TSQPPIGELVALYEELGKSYDAVISIH---- 121 (315)
T ss_dssp CEEEBTT--------TBC-------HHHHHHHHHTTTCC-CE-------EECCCHHHHHHHHHHHTTTCSEEEEEE----
T ss_pred EEEECCC--------CCC-------HHHHHHHHHhCCCC-cc-------cCCCCHHHHHHHHHHHHhcCCcEEEEe----
Confidence 3333321 011 3667666664 22 31 23455555555443 2 222322
Q ss_pred chhHHHHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHH--HHHhcCC-Chhhhc
Q 012398 307 GTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALE--MSKQTKA-PIEEAR 364 (464)
Q Consensus 307 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a--~~~~~G~-s~~eA~ 364 (464)
=+-.|+|-+++.+.....+.+.+|-++=..+++.|..-+++.+ |.+ +|. |.+|..
T Consensus 122 --iSS~LSGTy~sA~~Aa~~~~~~~I~ViDS~~~s~g~g~lv~~Aa~l~~-~G~~s~eeI~ 179 (315)
T 3fys_A 122 --LSSGISGTFSSAAAADSMVDNIDVYPFDSEISCLAQGFYALKAAELIK-NGASSPEDII 179 (315)
T ss_dssp --SCTTTCSHHHHHHHGGGGCSSCEEEEEECSSCHHHHHHHHHHHHHHHH-TTCCCHHHHH
T ss_pred --CCCcHhHHHHHHHHHHHhCCCCCEEEECCchhHHHHHHHHHHHHHHHH-cCCCCHHHHH
Confidence 1223455566666666667777888888877777777776654 444 799 888743
No 467
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=56.30 E-value=25 Score=34.20 Aligned_cols=47 Identities=17% Similarity=0.131 Sum_probs=31.9
Q ss_pred HHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 012398 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (464)
Q Consensus 314 Agll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~ 372 (464)
...+.+++..+.+...++|+|+|||..|...+.+... .| | +++.+|+
T Consensus 166 ~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~-----~G-----a--~Vi~~~~ 212 (357)
T 2cf5_A 166 VTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKA-----MG-----H--HVTVISS 212 (357)
T ss_dssp HHHHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHH-----HT-----C--EEEEEES
T ss_pred HHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHH-----CC-----C--eEEEEeC
Confidence 3445666655544467899999999888887766543 25 2 5777775
No 468
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=56.22 E-value=7.1 Score=35.98 Aligned_cols=84 Identities=18% Similarity=0.334 Sum_probs=54.7
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhcC
Q 012398 330 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI 408 (464)
Q Consensus 330 ~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~v 408 (464)
.||+|.|| |-.|..+++.|++ .| -+++.+++. .. ++.+ ..++.++++..
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~-D~~d-----------~~~~~~~~~~~ 55 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNP-----EE-------YDIYPFDKK------LL-DITN-----------ISQVQQVVQEI 55 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCT-----TT-------EEEEEECTT------TS-CTTC-----------HHHHHHHHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CC-------CEEEEeccc------cc-CCCC-----------HHHHHHHHHhc
Confidence 38999997 8888888887754 24 368888871 11 1221 13477788877
Q ss_pred CCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 012398 409 KPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 409 kptvLIG~S~~~g~----------------ft~evv~~Ma~~~erPIIFaLS 444 (464)
++|++|=+.+.... -+..+++.+.+..- .+||.=|
T Consensus 56 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS 106 (287)
T 3sc6_A 56 RPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYIST 106 (287)
T ss_dssp CCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred CCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 89999987765431 03457777776554 4888544
No 469
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=56.09 E-value=1.1e+02 Score=30.45 Aligned_cols=134 Identities=14% Similarity=0.212 Sum_probs=82.4
Q ss_pred HHHHHHHHHhcCCCeeeeeecCCCccHHHHHHHHcCCCceee--c--CccchhHHHHHHHHHHHHHhCCCCCcceEEEeC
Q 012398 261 QEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFN--D--DIQGTASVVLAGILSALKLVGGTLADQTFLFLG 336 (464)
Q Consensus 261 defv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~Fn--D--DiQGTaaV~LAgll~Alk~~g~~l~d~riv~~G 336 (464)
.+.++.+ .+| .+ +|-+--++. .+.+.+.+|-.++||.| | ..|=| =+||=++.-.+..| +|++.||+++|
T Consensus 89 ~DTarvl-s~~-~D-~iviR~~~~-~~~~~la~~~~~vPVINag~G~~~HPt--QaLaDl~Ti~e~~g-~l~gl~va~vG 161 (310)
T 3csu_A 89 ADTISVI-STY-VD-AIVMRHPQE-GAARLATEFSGNVPVLNAGDGSNQHPT--QTLLDLFTIQETQG-RLDNLHVAMVG 161 (310)
T ss_dssp HHHHHHH-TTT-CS-EEEEEESST-THHHHHHHHCTTCCEEEEEETTSCCHH--HHHHHHHHHHHHHS-CSSSCEEEEES
T ss_pred HHHHHHH-HHh-CC-EEEEECCCh-hHHHHHHHhcCCCCEEcCccCCCCCch--HHHHHHHHHHHHhC-CcCCcEEEEEC
Confidence 3344333 456 33 344556654 45666777765799999 4 35544 45666666555554 79999999999
Q ss_pred cchHHHHHHHHHHHHHHHhc-CCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcC----CCCCHHHHHhcCCCc
Q 012398 337 AGEAGTGIAELIALEMSKQT-KAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHA----PIKSLLDAVKAIKPT 411 (464)
Q Consensus 337 AGsAg~GiA~ll~~a~~~~~-G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~----~~~~L~e~v~~vkpt 411 (464)
-|.= --+|+-++.++.+ . |+ ++.++-.+|+-.. +.-..+++... ...++.||+++ +|
T Consensus 162 D~~~-~rva~Sl~~~~~~-~~g~-------~v~~~~P~~~~~~-------~~~~~~~~~~g~~~~~~~d~~eav~~--aD 223 (310)
T 3csu_A 162 DLKY-GRTVHSLTQALAK-FDGN-------RFYFIAPDALAMP-------QYILDMLDEKGIAWSLHSSIEEVMAE--VD 223 (310)
T ss_dssp CTTT-CHHHHHHHHHHHT-SSSC-------EEEEECCGGGCCC-------HHHHHHHHHTTCCEEECSCGGGTTTT--CS
T ss_pred CCCC-CchHHHHHHHHHh-CCCC-------EEEEECCcccccC-------HHHHHHHHHcCCeEEEEcCHHHHhcC--CC
Confidence 8631 1256777776655 4 64 6888888776432 11122333211 12689999998 99
Q ss_pred EEEeccCC
Q 012398 412 MLMGTSGV 419 (464)
Q Consensus 412 vLIG~S~~ 419 (464)
|+.-..-+
T Consensus 224 vvyt~~~q 231 (310)
T 3csu_A 224 ILYMTRVQ 231 (310)
T ss_dssp EEEECC--
T ss_pred EEEECCcc
Confidence 99976543
No 470
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=56.06 E-value=7.6 Score=36.90 Aligned_cols=100 Identities=13% Similarity=0.189 Sum_probs=59.7
Q ss_pred CCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhc----------hhhhh-h
Q 012398 327 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFK----------KPWAH-E 394 (464)
Q Consensus 327 l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k----------~~fa~-~ 394 (464)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|+..- .....+...+ ..+.. +
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 87 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLK-----LN-------QVVIGLDNFST---GHQYNLDEVKTLVSTEQWSRFCFIEGD 87 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS---CCHHHHHHHHHTSCHHHHTTEEEEECC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCCC---CchhhhhhhhhccccccCCceEEEEcc
Confidence 45679999996 8899999888875 25 36888877421 1001011110 01111 1
Q ss_pred cCCCCCHHHHHhcCCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEc
Q 012398 395 HAPIKSLLDAVKAIKPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFAL 443 (464)
Q Consensus 395 ~~~~~~L~e~v~~vkptvLIG~S~~~g~----------------ft~evv~~Ma~~~erPIIFaL 443 (464)
..+..++.++++ ++|++|=+.+.... -|..+++.+.+..-+.+||.=
T Consensus 88 l~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~S 150 (351)
T 3ruf_A 88 IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAA 150 (351)
T ss_dssp TTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEe
Confidence 111235777787 59999988875321 134478888877667899853
No 471
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=55.99 E-value=28 Score=34.25 Aligned_cols=38 Identities=32% Similarity=0.317 Sum_probs=26.0
Q ss_pred CCCCCcceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 324 GGTLADQTFLFLGAG-EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 324 g~~l~d~riv~~GAG-sAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
..+|++.+++|.||+ -.|.+||+.+++ .|. +++++|++
T Consensus 40 ~~~l~gk~vlVTGas~GIG~aia~~La~-----~Ga-------~Vvl~~r~ 78 (346)
T 3kvo_A 40 TGRLAGCTVFITGASRGIGKAIALKAAK-----DGA-------NIVIAAKT 78 (346)
T ss_dssp CSTTTTCEEEEETTTSHHHHHHHHHHHT-----TTC-------EEEEEESC
T ss_pred CCCCCCCEEEEeCCChHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 346889999999984 445556665543 353 68888875
No 472
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=55.95 E-value=7.2 Score=44.79 Aligned_cols=42 Identities=19% Similarity=0.273 Sum_probs=33.3
Q ss_pred CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+|++.||+++|||.-|+-+++.|+.+ |+.-. ...+|.++|.+
T Consensus 422 kL~~~~VlvVGaGGlGsevlk~La~~-----Gv~~g-~~G~i~lvD~D 463 (1015)
T 3cmm_A 422 KIANSKVFLVGSGAIGCEMLKNWALL-----GLGSG-SDGYIVVTDND 463 (1015)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TTTCS-TTCEEEEECCC
T ss_pred HHhcCeEEEEecCHHHHHHHHHHHHc-----CcCcC-CCCeEEEEeCC
Confidence 46789999999999999999999876 54111 12689999976
No 473
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=55.80 E-value=27 Score=34.11 Aligned_cols=50 Identities=20% Similarity=0.080 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 012398 312 VLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (464)
Q Consensus 312 ~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~ 372 (464)
.++..+.|+.-...--..++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 174 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~-----~Ga------~~Vi~~~~ 223 (371)
T 1f8f_A 174 GIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKV-----CGA------SIIIAVDI 223 (371)
T ss_dssp HHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHH-----HTC------SEEEEEES
T ss_pred hHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 444444555322333356899999999888877766543 252 36777775
No 474
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=55.60 E-value=24 Score=34.88 Aligned_cols=79 Identities=15% Similarity=0.177 Sum_probs=53.3
Q ss_pred HHHHHHHHHhcCCCeeeeeecCCCc-------cHHHHHHHHcCCCceeecCccchhHHHHHHHHHHHHHhCCCCCcceEE
Q 012398 261 QEFMTAVKQNYGEKVLIQFEDFANH-------NAFELLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFL 333 (464)
Q Consensus 261 defv~av~~~fGp~~lIq~EDf~~~-------~af~iL~ryr~~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv 333 (464)
-+.+++.-+.|.+..+|| |++.. .-+++..+|.-.+|+.|-|-+|+..-. ++
T Consensus 94 ~~V~eaaL~~~~Ga~iIN--dIs~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~G~p~t~---------------~~---- 152 (300)
T 3k13_A 94 WEVIEAGLKCLQGKSIVN--SISLKEGEEVFLEHARIIKQYGAATVVMAFDEKGQADTA---------------AR---- 152 (300)
T ss_dssp HHHHHHHHHHCSSCCEEE--EECSTTCHHHHHHHHHHHHHHTCEEEEESEETTEECCSH---------------HH----
T ss_pred HHHHHHHHHhcCCCCEEE--eCCcccCChhHHHHHHHHHHhCCeEEEEeeCCCCCCCCH---------------HH----
Confidence 366777777664556776 66544 567888999999999998878875320 00
Q ss_pred EeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 012398 334 FLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (464)
Q Consensus 334 ~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~ 372 (464)
-+.+++.+...++.+.|++ +++|+ +|.
T Consensus 153 -------~~~i~~r~~~~~~~~~Gi~----~~~Ii-lDP 179 (300)
T 3k13_A 153 -------KIEVCERAYRLLVDKVGFN----PHDII-FDP 179 (300)
T ss_dssp -------HHHHHHHHHHHHHHHTCCC----GGGEE-EEC
T ss_pred -------HHHHHHHHHHHHHHHcCCC----HHHEE-EeC
Confidence 1257888877753447996 46676 676
No 475
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=55.55 E-value=12 Score=33.54 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=20.9
Q ss_pred cceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAG-EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAG-sAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+.+++|.||+ -.|..+|+.|++ .|. +++++|++
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~-----~G~-------~V~~~~r~ 38 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHA-----KGY-------RVGLMARD 38 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 4578999874 445556665543 353 58888764
No 476
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=55.51 E-value=12 Score=38.18 Aligned_cols=32 Identities=22% Similarity=0.303 Sum_probs=26.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVD 371 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD 371 (464)
+.+|+|+|||.||+..|..+.+. .|. ++.++|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~----~G~-------~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASL----HKK-------RVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHH----HCC-------CEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHH----cCC-------EEEEEe
Confidence 45799999999999999988751 153 689999
No 477
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=55.45 E-value=29 Score=35.97 Aligned_cols=118 Identities=16% Similarity=0.199 Sum_probs=62.8
Q ss_pred HHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcc----cCCCcc--------------
Q 012398 321 KLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI----VSSRKE-------------- 382 (464)
Q Consensus 321 k~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl----~~~r~~-------------- 382 (464)
+..++...-.||.|+|+|..|.++|..+.+ | .+++++|.+--. ..++..
T Consensus 28 ~~~~r~~~~mkIaVIGlG~mG~~lA~~La~------G-------~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~ 94 (432)
T 3pid_A 28 QQMGRGSEFMKITISGTGYVGLSNGVLIAQ------N-------HEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKP 94 (432)
T ss_dssp -------CCCEEEEECCSHHHHHHHHHHHT------T-------SEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSC
T ss_pred cccccccCCCEEEEECcCHHHHHHHHHHHc------C-------CeEEEEecCHHHhhHHhccCCccccccHHHHHhhcc
Confidence 455666777899999999999999987642 4 357778864110 011000
Q ss_pred -CC---chhchhhhh-h------cCC---------CCCHHHHHhc---CC-CcEEEeccCCCCCCCHHHHHHHHcCCCCc
Q 012398 383 -SL---QHFKKPWAH-E------HAP---------IKSLLDAVKA---IK-PTMLMGTSGVGKTFTKEVVEAMASFNEKP 438 (464)
Q Consensus 383 -~l---~~~k~~fa~-~------~~~---------~~~L~e~v~~---vk-ptvLIG~S~~~g~ft~evv~~Ma~~~erP 438 (464)
.+ ++.....+. + ..+ ...+.++++. ++ -+++|=.|+.+.-.|+++.+... ++-
T Consensus 95 ~~l~~ttd~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~l~~g~iVV~~STv~pgtt~~l~~~l~---~~~ 171 (432)
T 3pid_A 95 LNFRATTDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTEINPNAVMIIKSTIPVGFTRDIKERLG---IDN 171 (432)
T ss_dssp CCEEEESCHHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHHHCTTSEEEECSCCCTTHHHHHHHHHT---CCC
T ss_pred CCeEEEcCHHHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHhcCCCcEEEEeCCCChHHHHHHHHHHh---hcc
Confidence 00 000000000 0 000 0124444333 23 45777788887678888887775 445
Q ss_pred EEEEcCCCCCCCCCCHHHH
Q 012398 439 VIFALSNPTSQSECTAEEA 457 (464)
Q Consensus 439 IIFaLSNPt~~~E~tpedA 457 (464)
++| ||.+.-|-.+..-
T Consensus 172 v~~---sPe~~~~G~A~~~ 187 (432)
T 3pid_A 172 VIF---SPEFLREGRALYD 187 (432)
T ss_dssp EEE---CCCCCCTTSHHHH
T ss_pred Eee---cCccCCcchhhhc
Confidence 665 9998888877554
No 478
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=55.42 E-value=20 Score=34.43 Aligned_cols=50 Identities=14% Similarity=-0.051 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhCCCCCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 312 VLAGILSALKLVGGTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 312 ~LAgll~Alk~~g~~l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.++..+.+++-...--.+++++|.|| |..|..+++++.. .|. +++.+|++
T Consensus 129 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G~-------~Vi~~~~~ 179 (333)
T 1wly_A 129 KGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARH-----LGA-------TVIGTVST 179 (333)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred hHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 44445556653334445789999996 9899888887754 352 58887764
No 479
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=55.29 E-value=25 Score=34.88 Aligned_cols=99 Identities=12% Similarity=0.087 Sum_probs=48.1
Q ss_pred HHHHhCCCCCc-ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhc--
Q 012398 319 ALKLVGGTLAD-QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH-- 395 (464)
Q Consensus 319 Alk~~g~~l~d-~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~-- 395 (464)
.-.+.....++ .||-|+|+|..|-.-++.+.........+. +-.+=+-++|++ . +.-+.+|+.-
T Consensus 15 ~~~~~~~~Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~--~~~elvav~d~~----~-------~~a~~~a~~~~~ 81 (412)
T 4gqa_A 15 TENLYFQSMSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLP--KRPHLYALADQD----Q-------AMAERHAAKLGA 81 (412)
T ss_dssp ----------CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSS--SEEEEEEEECSS----H-------HHHHHHHHHHTC
T ss_pred cccCccccccccceEEEEcCcHHHHHHHHHHHhccccccccC--CCeEEEEEEcCC----H-------HHHHHHHHHcCC
Confidence 33344445554 699999999888765555544311100010 011123355542 1 1112344321
Q ss_pred C-CCCCHHHHHhcCCCcEEEeccCCCCCCCHHHHH-HHH
Q 012398 396 A-PIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVE-AMA 432 (464)
Q Consensus 396 ~-~~~~L~e~v~~vkptvLIG~S~~~g~ft~evv~-~Ma 432 (464)
+ -..++.|.++.-++|+++ +++++ .+-.+++. +|.
T Consensus 82 ~~~y~d~~~ll~~~~vD~V~-I~tp~-~~H~~~~~~al~ 118 (412)
T 4gqa_A 82 EKAYGDWRELVNDPQVDVVD-ITSPN-HLHYTMAMAAIA 118 (412)
T ss_dssp SEEESSHHHHHHCTTCCEEE-ECSCG-GGHHHHHHHHHH
T ss_pred CeEECCHHHHhcCCCCCEEE-ECCCc-HHHHHHHHHHHH
Confidence 1 136899999988899887 67755 45555544 444
No 480
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=55.26 E-value=10 Score=37.61 Aligned_cols=34 Identities=24% Similarity=0.484 Sum_probs=26.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+.+|+|+|||.+|+..|..|.+ .| .++.++|+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~-----~g-------~~v~v~E~~~ 36 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE-----KG-------HQVHIIDQRD 36 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CC-------CcEEEEEecC
Confidence 4689999999999999998864 24 3688888753
No 481
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=55.16 E-value=9 Score=37.15 Aligned_cols=101 Identities=17% Similarity=0.195 Sum_probs=60.0
Q ss_pred CCCCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhh-------hh-hc
Q 012398 325 GTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPW-------AH-EH 395 (464)
Q Consensus 325 ~~l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~f-------a~-~~ 395 (464)
..+++.+|+|.|| |..|..+++.|++. .| ..++++++++- ..+...++.+ .. +-
T Consensus 17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~----~g------~~~V~~~~r~~-------~~~~~~~~~~~~~~v~~~~~Dl 79 (344)
T 2gn4_A 17 NMLDNQTILITGGTGSFGKCFVRKVLDT----TN------AKKIIVYSRDE-------LKQSEMAMEFNDPRMRFFIGDV 79 (344)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHH----CC------CSEEEEEESCH-------HHHHHHHHHHCCTTEEEEECCT
T ss_pred HhhCCCEEEEECCCcHHHHHHHHHHHhh----CC------CCEEEEEECCh-------hhHHHHHHHhcCCCEEEEECCC
Confidence 4577889999996 89999999988752 14 24788887641 1111111111 11 11
Q ss_pred CCCCCHHHHHhcCCCcEEEeccCCCCC----C------------CHHHHHHHHcCCCCcEEEEcC
Q 012398 396 APIKSLLDAVKAIKPTMLMGTSGVGKT----F------------TKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 396 ~~~~~L~e~v~~vkptvLIG~S~~~g~----f------------t~evv~~Ma~~~erPIIFaLS 444 (464)
.+..++.+++++ +|++|=+.+.... . |..+++++.+..-+-|||.=|
T Consensus 80 ~d~~~l~~~~~~--~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS 142 (344)
T 2gn4_A 80 RDLERLNYALEG--VDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALST 142 (344)
T ss_dssp TCHHHHHHHTTT--CSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCHHHHHHHHhc--CCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC
Confidence 111346677774 9999988876531 0 235666666665567888544
No 482
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=55.14 E-value=13 Score=35.34 Aligned_cols=101 Identities=13% Similarity=0.205 Sum_probs=58.3
Q ss_pred CCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhch----------hhhh-h
Q 012398 327 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK----------PWAH-E 394 (464)
Q Consensus 327 l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~----------~fa~-~ 394 (464)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.- ....+.+...+. .+.. +
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~D 89 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLK-----LD-------QKVVGLDNFA---TGHQRNLDEVRSLVSEKQWSNFKFIQGD 89 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCHHHHHHHHHHSCHHHHTTEEEEECC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCC---ccchhhHHHHhhhcccccCCceEEEECC
Confidence 45578999998 8888888888865 24 3688888742 110011111111 1111 1
Q ss_pred cCCCCCHHHHHhcCCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 012398 395 HAPIKSLLDAVKAIKPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 395 ~~~~~~L~e~v~~vkptvLIG~S~~~g~----------------ft~evv~~Ma~~~erPIIFaLS 444 (464)
..+..++.++++ ++|++|=+.+..+. -+..+++.+.+..-+.|||.=|
T Consensus 90 l~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 90 IRNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp TTSHHHHHHHHT--TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 111134677777 59999988875431 1345677776655566888533
No 483
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=54.94 E-value=6.7 Score=36.26 Aligned_cols=37 Identities=22% Similarity=0.279 Sum_probs=24.8
Q ss_pred CCCCcceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 325 GTLADQTFLFLGAG-EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 325 ~~l~d~riv~~GAG-sAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.++++++++|-||+ -.|.++|+.+++ .|. +++++|++
T Consensus 4 ~~l~~k~vlVTGas~gIG~~ia~~l~~-----~G~-------~V~~~~r~ 41 (259)
T 4e6p_A 4 KRLEGKSALITGSARGIGRAFAEAYVR-----EGA-------TVAIADID 41 (259)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 35788899999974 445556665543 353 68888864
No 484
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=54.91 E-value=18 Score=34.34 Aligned_cols=37 Identities=16% Similarity=0.181 Sum_probs=27.4
Q ss_pred CCCCcceEEEeCcc---hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 325 GTLADQTFLFLGAG---EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 325 ~~l~d~riv~~GAG---sAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.++++.++||.||+ -.|.+||+.|++ .|. +++++|++
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~-----~G~-------~V~~~~r~ 65 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCA-----QGA-------EVALTYLS 65 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 46888999999996 456668887764 353 58888875
No 485
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=54.73 E-value=26 Score=33.48 Aligned_cols=51 Identities=20% Similarity=0.218 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHhCCCCCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 012398 310 SVVLAGILSALKLVGGTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (464)
Q Consensus 310 aV~LAgll~Alk~~g~~l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~ 372 (464)
.+.++..+.|+.-...--.+++|+|.|| |..|..+++++.. .|. +++.+|+
T Consensus 131 ~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~-----~Ga-------~Vi~~~~ 182 (336)
T 4b7c_A 131 GMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARL-----KGC-------RVVGIAG 182 (336)
T ss_dssp SHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 3455666667744444456789999999 9888888876653 352 6777775
No 486
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=54.60 E-value=9.6 Score=34.41 Aligned_cols=37 Identities=19% Similarity=0.256 Sum_probs=24.1
Q ss_pred CCCCcceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 325 GTLADQTFLFLGAG-EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 325 ~~l~d~riv~~GAG-sAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.++++.+++|.||. -.|..+|+.|++ .|. +++++|++
T Consensus 2 ~~~~~k~vlVtGasggiG~~~a~~l~~-----~G~-------~V~~~~r~ 39 (251)
T 1zk4_A 2 NRLDGKVAIITGGTLGIGLAIATKFVE-----EGA-------KVMITGRH 39 (251)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 35778899999974 444445555543 352 58888864
No 487
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=54.53 E-value=12 Score=39.38 Aligned_cols=35 Identities=26% Similarity=0.467 Sum_probs=28.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GL 375 (464)
...|||+|+|.+|+++|..+.. .|+ ++.++|+..+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~-----rG~-------~V~LlE~~~~ 66 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAA-----SGI-------KTGLIEMQDF 66 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 4579999999999999998865 364 5889997643
No 488
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=54.46 E-value=5.9 Score=36.43 Aligned_cols=97 Identities=18% Similarity=0.146 Sum_probs=55.1
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHHHhcC
Q 012398 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAI 408 (464)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~v 408 (464)
+|+|.|| |-.|..+++.|++. ..| .+++.++++. .+...+......+.. +-.+..++.+++++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~- 66 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKK---VPA-------SQIIAIVRNV----EKASTLADQGVEVRHGDYNQPESLQKAFAG- 66 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTTHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred eEEEEcCCchHHHHHHHHHHHh---CCC-------CeEEEEEcCH----HHHhHHhhcCCeEEEeccCCHHHHHHHHhc-
Confidence 6899998 88888888877541 002 3577777641 111111111111111 11112357788875
Q ss_pred CCcEEEeccCCCC------CCCHHHHHHHHcCCCCcEEEEc
Q 012398 409 KPTMLMGTSGVGK------TFTKEVVEAMASFNEKPVIFAL 443 (464)
Q Consensus 409 kptvLIG~S~~~g------~ft~evv~~Ma~~~erPIIFaL 443 (464)
+|++|=+++... .-+..+++.+.+..-+.|||.=
T Consensus 67 -~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~S 106 (287)
T 2jl1_A 67 -VSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTG 106 (287)
T ss_dssp -CSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred -CCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 899998876431 1245677777766656788843
No 489
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=54.44 E-value=8.5 Score=38.57 Aligned_cols=36 Identities=17% Similarity=0.267 Sum_probs=27.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
..+|||+|||.||+..|..|.+. +- ..++.++|+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRL-----KP-----EWDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHh-----Cc-----CCCEEEEECCC
Confidence 46899999999999999988653 11 13678888765
No 490
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=54.41 E-value=26 Score=34.23 Aligned_cols=35 Identities=20% Similarity=0.144 Sum_probs=25.2
Q ss_pred CCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 012398 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (464)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~ 372 (464)
-..++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 224 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKA-----AGA------SRIIGVGT 224 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 356899999999888877766543 253 36887775
No 491
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=54.40 E-value=20 Score=32.33 Aligned_cols=37 Identities=22% Similarity=0.208 Sum_probs=24.9
Q ss_pred CCCCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 325 GTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 325 ~~l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
.++++.+++|.|| |-.|..+|+.|++ .| -+++++|++
T Consensus 7 ~~~~~~~vlVtGasggiG~~la~~l~~-----~G-------~~V~~~~r~ 44 (255)
T 1fmc_A 7 LRLDGKCAIITGAGAGIGKEIAITFAT-----AG-------ASVVVSDIN 44 (255)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHT-----TT-------CEEEEEESC
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHH-----CC-------CEEEEEcCC
Confidence 3577889999997 4556666665543 35 268888864
No 492
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=54.27 E-value=26 Score=34.12 Aligned_cols=45 Identities=18% Similarity=0.113 Sum_probs=28.8
Q ss_pred HHHHHHhCCCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 012398 317 LSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (464)
Q Consensus 317 l~Alk~~g~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~ 372 (464)
+.++.-...--.+++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 179 ~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~-----~Ga------~~Vi~~~~ 223 (373)
T 2fzw_A 179 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKV-----AGA------SRIIGVDI 223 (373)
T ss_dssp HHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 3344322333356899999999888877766543 253 46887775
No 493
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=54.25 E-value=16 Score=38.05 Aligned_cols=40 Identities=23% Similarity=0.307 Sum_probs=31.0
Q ss_pred CCCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcc
Q 012398 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (464)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl 376 (464)
.+.++..|||+|||.||+..|-.+.+ .|. ++.++++...+
T Consensus 122 ~~~~~~DVvVVGaG~aGl~aA~~la~-----~G~-------~V~vlEk~~~~ 161 (571)
T 1y0p_A 122 APHDTVDVVVVGSGGAGFSAAISATD-----SGA-------KVILIEKEPVI 161 (571)
T ss_dssp CCSEECSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSSS
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHH-----CCC-------cEEEEeCCCCC
Confidence 34556789999999999999987764 363 58889987654
No 494
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=54.24 E-value=24 Score=33.89 Aligned_cols=50 Identities=12% Similarity=0.058 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHhCCCCCcceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 012398 311 VVLAGILSALKLVGGTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (464)
Q Consensus 311 V~LAgll~Alk~~g~~l~d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~ 372 (464)
+.++..+.|+.-...--.+++|+|.|| |..|..+++++.. .|. +++.+|+
T Consensus 138 ~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~-----~G~-------~V~~~~~ 188 (345)
T 2j3h_A 138 MPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKM-----MGC-------YVVGSAG 188 (345)
T ss_dssp HHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred ccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 344555566643333345789999997 9899888877654 352 5777765
No 495
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=54.22 E-value=8.7 Score=38.26 Aligned_cols=34 Identities=18% Similarity=0.297 Sum_probs=26.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccC
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~G 374 (464)
+.+|+|+|||.+|+..|..|.+ .|. ++.++++..
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~-----~g~-------~v~v~E~~~ 49 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRS-----RGT-------DAVLLESSA 49 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHT-----TTC-------CEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcCC
Confidence 3579999999999999998864 353 577777764
No 496
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=54.07 E-value=8 Score=37.76 Aligned_cols=36 Identities=28% Similarity=0.369 Sum_probs=30.0
Q ss_pred CCCcceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+|++.+|||+|+|..|..-+++|+.+ | .++.++|.+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~-----G-------a~VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPT-----G-------CKLTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGG-----T-------CEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhC-----C-------CEEEEEcCC
Confidence 57889999999999999999999763 4 358888864
No 497
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=53.89 E-value=27 Score=32.48 Aligned_cols=92 Identities=12% Similarity=0.143 Sum_probs=50.0
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhhhcCCCCCHHHHHhc
Q 012398 329 DQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKA 407 (464)
Q Consensus 329 d~riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~L~e~v~~ 407 (464)
+.+|+|.|| |-.|..+++.|++ .| -+++.+|+. +.. + . .+.-+.....++.++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~~---~-~-~~~~Dl~d~~~~~~~~~~ 58 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQ-----NN-------WHAVGCGFR------RAR---P-K-FEQVNLLDSNAVHHIIHD 58 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEC-----------------------------CHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHh-----CC-------CeEEEEccC------CCC---C-C-eEEecCCCHHHHHHHHHh
Confidence 358999998 8888888888764 24 367777753 111 0 1 111122223467788887
Q ss_pred CCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 012398 408 IKPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 408 vkptvLIG~S~~~g~----------------ft~evv~~Ma~~~erPIIFaLS 444 (464)
+++|++|=+.+.... -+..+++.+.+.. ..|||.=|
T Consensus 59 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS 110 (315)
T 2ydy_A 59 FQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVG-AFLIYISS 110 (315)
T ss_dssp HCCSEEEECC-------------------CHHHHHHHHHHHHHT-CEEEEEEE
T ss_pred hCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-CeEEEEch
Confidence 789999977764321 1345677776544 36887543
No 498
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=53.74 E-value=13 Score=36.95 Aligned_cols=34 Identities=24% Similarity=0.445 Sum_probs=25.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccc
Q 012398 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (464)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~ 373 (464)
+.+|+|+|||.||+..|..|.+. .| .++.++++.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~----~g-------~~v~v~E~~ 40 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQ----LD-------KRVLVLERR 40 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHH----SC-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHh----CC-------CCEEEEeCC
Confidence 46899999999999999988753 14 256666654
No 499
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=53.63 E-value=7 Score=39.96 Aligned_cols=97 Identities=16% Similarity=0.175 Sum_probs=52.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHH-Hhc
Q 012398 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDA-VKA 407 (464)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~-v~~ 407 (464)
.+|+|+|.|..|..+|++|.. .|. .++++|++- ++-+.+.....+... +......|.++ ++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~-----~g~-------~vvvId~d~----~~v~~~~~~g~~vi~GDat~~~~L~~agi~- 67 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLS-----SGV-------KMVVLDHDP----DHIETLRKFGMKVFYGDATRMDLLESAGAA- 67 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECCH----HHHHHHHHTTCCCEESCTTCHHHHHHTTTT-
T ss_pred CeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEECCH----HHHHHHHhCCCeEEEcCCCCHHHHHhcCCC-
Confidence 479999999999999998875 353 588888751 110001100000000 11111124443 33
Q ss_pred CCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 012398 408 IKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 445 (464)
Q Consensus 408 vkptvLIG~S~~~g~ft~evv~~Ma~~~erPIIFaLSN 445 (464)
+++++|-+.... .-+..++....+.+...-|++.+|
T Consensus 68 -~A~~viv~~~~~-~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 68 -KAEVLINAIDDP-QTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp -TCSEEEECCSSH-HHHHHHHHHHHHHCTTCEEEEEES
T ss_pred -ccCEEEECCCCh-HHHHHHHHHHHHhCCCCeEEEEEC
Confidence 589888666533 334445554445556655666554
No 500
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=53.61 E-value=7.9 Score=34.15 Aligned_cols=93 Identities=15% Similarity=0.167 Sum_probs=53.7
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcccCcccCCCccCCchhchhhhh-hcCCCCCHHHHHhcC
Q 012398 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAI 408 (464)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~a~~~~~G~s~~eA~~~i~lvD~~GLl~~~r~~~l~~~k~~fa~-~~~~~~~L~e~v~~v 408 (464)
||+|.|| |-.|..+++.|++ .| .++++++++.- ....+......+.. +-.+. .. +++++
T Consensus 2 kilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~~----~~~~~~~~~~~~~~~D~~d~-~~-~~~~~- 62 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARR-----RG-------HEVLAVVRDPQ----KAADRLGATVATLVKEPLVL-TE-ADLDS- 62 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCHH----HHHHHTCTTSEEEECCGGGC-CH-HHHTT-
T ss_pred EEEEEcCCCHHHHHHHHHHHH-----CC-------CEEEEEEeccc----ccccccCCCceEEecccccc-cH-hhccc-
Confidence 6999998 8899999988875 25 36787776411 00000000111111 11111 12 67775
Q ss_pred CCcEEEeccCCC---C------CCCHHHHHHHHcCCCCcEEEEcC
Q 012398 409 KPTMLMGTSGVG---K------TFTKEVVEAMASFNEKPVIFALS 444 (464)
Q Consensus 409 kptvLIG~S~~~---g------~ft~evv~~Ma~~~erPIIFaLS 444 (464)
+|++|=+.+.. . ..+..+++.|.+.. ..+||.-|
T Consensus 63 -~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS 105 (224)
T 3h2s_A 63 -VDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFILG 105 (224)
T ss_dssp -CSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCC-CEEEEECC
T ss_pred -CCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcC-CcEEEEec
Confidence 89999877653 0 12466788887766 78888643
Done!