Query 012402
Match_columns 464
No_of_seqs 288 out of 847
Neff 3.9
Searched_HMMs 46136
Date Fri Mar 29 02:16:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012402.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012402hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1472 Histone acetyltransfer 100.0 1.3E-44 2.7E-49 390.2 4.4 259 191-463 352-618 (720)
2 PRK07757 acetyltransferase; Pr 99.6 6.2E-14 1.3E-18 121.9 15.8 106 256-377 43-150 (152)
3 PRK10146 aminoalkylphosphonic 99.5 2.7E-13 5.8E-18 115.8 11.3 91 245-336 38-135 (144)
4 PF13508 Acetyltransf_7: Acety 99.4 6.5E-13 1.4E-17 105.1 9.5 77 254-336 3-79 (79)
5 PRK10140 putative acetyltransf 99.4 2.3E-12 4.9E-17 111.5 13.6 149 207-359 2-159 (162)
6 PF13673 Acetyltransf_10: Acet 99.4 1.6E-12 3.5E-17 107.0 11.5 88 240-334 30-117 (117)
7 PF00583 Acetyltransf_1: Acety 99.4 1.8E-12 4E-17 100.9 9.9 75 260-335 2-83 (83)
8 PTZ00330 acetyltransferase; Pr 99.4 7.7E-12 1.7E-16 107.2 14.4 123 208-336 6-138 (147)
9 COG1246 ArgA N-acetylglutamate 99.4 1.9E-12 4.2E-17 119.3 10.2 130 211-351 3-137 (153)
10 TIGR03827 GNAT_ablB putative b 99.4 7.8E-12 1.7E-16 121.2 14.3 144 208-359 115-263 (266)
11 PRK03624 putative acetyltransf 99.4 1.5E-11 3.3E-16 102.5 13.3 123 209-337 3-128 (140)
12 TIGR01575 rimI ribosomal-prote 99.3 2.3E-11 5.1E-16 100.6 13.6 96 241-339 18-116 (131)
13 COG0456 RimI Acetyltransferase 99.3 9.7E-12 2.1E-16 109.4 11.2 96 241-337 42-152 (177)
14 PRK07922 N-acetylglutamate syn 99.3 3.1E-11 6.8E-16 109.9 12.8 120 207-336 4-124 (169)
15 PRK12308 bifunctional arginino 99.3 3.3E-11 7.1E-16 130.3 14.8 106 255-374 504-609 (614)
16 PF13527 Acetyltransf_9: Acety 99.3 7.9E-11 1.7E-15 99.1 13.4 80 254-336 41-126 (127)
17 PRK10314 putative acyltransfer 99.3 1.9E-11 4.2E-16 110.0 10.0 84 254-337 48-132 (153)
18 TIGR01890 N-Ac-Glu-synth amino 99.3 2.8E-11 6.1E-16 125.2 12.3 91 256-348 324-416 (429)
19 PRK09491 rimI ribosomal-protei 99.3 6.2E-11 1.3E-15 102.7 11.9 100 256-360 42-144 (146)
20 PHA00673 acetyltransferase dom 99.2 1.1E-10 2.3E-15 107.8 13.0 93 244-337 45-144 (154)
21 PF13420 Acetyltransf_4: Acety 99.2 1.7E-10 3.6E-15 100.0 13.4 98 243-342 39-142 (155)
22 TIGR02382 wecD_rffC TDP-D-fuco 99.2 8.9E-11 1.9E-15 107.8 11.4 81 255-337 99-183 (191)
23 PLN02706 glucosamine 6-phospha 99.2 2.1E-10 4.5E-15 99.6 12.8 75 262-337 63-142 (150)
24 PRK10514 putative acetyltransf 99.2 2.7E-10 5.9E-15 97.9 12.3 74 256-339 51-126 (145)
25 PRK09831 putative acyltransfer 99.2 2.7E-10 5.8E-15 99.8 12.2 75 255-341 54-128 (147)
26 PLN02825 amino-acid N-acetyltr 99.2 1.8E-10 3.8E-15 123.3 12.2 94 237-336 394-487 (515)
27 PRK10151 ribosomal-protein-L7/ 99.1 2.6E-09 5.7E-14 95.8 16.8 151 207-360 9-174 (179)
28 PF13523 Acetyltransf_8: Acety 99.1 1.1E-09 2.3E-14 95.6 12.7 130 211-340 1-142 (152)
29 PRK05279 N-acetylglutamate syn 99.1 3.4E-10 7.4E-15 117.4 11.1 80 256-337 336-415 (441)
30 PRK10975 TDP-fucosamine acetyl 99.1 8.5E-10 1.8E-14 101.2 12.3 81 255-337 102-186 (194)
31 PRK15130 spermidine N1-acetylt 99.1 1.2E-09 2.5E-14 98.6 12.3 111 246-359 49-163 (186)
32 KOG3139 N-acetyltransferase [G 99.1 1.8E-09 3.8E-14 100.7 13.6 124 224-348 25-155 (165)
33 TIGR02406 ectoine_EctA L-2,4-d 99.1 6.1E-10 1.3E-14 99.9 10.3 81 256-337 41-126 (157)
34 cd02169 Citrate_lyase_ligase C 99.1 5.3E-10 1.2E-14 112.2 9.9 74 257-337 8-82 (297)
35 TIGR03585 PseH pseudaminic aci 99.0 2.7E-09 5.9E-14 92.3 11.9 97 242-340 39-139 (156)
36 PRK13688 hypothetical protein; 99.0 1.2E-09 2.5E-14 100.0 10.1 80 252-337 43-131 (156)
37 TIGR01686 FkbH FkbH-like domai 99.0 4.9E-09 1.1E-13 104.6 14.4 124 207-336 185-318 (320)
38 PRK10809 ribosomal-protein-S5- 99.0 7.8E-09 1.7E-13 94.0 14.4 88 252-340 73-167 (194)
39 PHA01807 hypothetical protein 99.0 6.4E-09 1.4E-13 95.2 13.1 81 251-332 50-136 (153)
40 TIGR00124 cit_ly_ligase [citra 99.0 4.1E-09 8.8E-14 107.3 11.8 76 255-337 32-107 (332)
41 TIGR03448 mycothiol_MshD mycot 99.0 1E-08 2.3E-13 98.6 13.7 79 255-337 47-126 (292)
42 TIGR03103 trio_acet_GNAT GNAT- 99.0 8.3E-09 1.8E-13 110.9 14.4 96 241-337 110-215 (547)
43 PRK10562 putative acetyltransf 98.9 5.6E-09 1.2E-13 90.8 9.1 74 255-337 49-123 (145)
44 TIGR03448 mycothiol_MshD mycot 98.9 1E-08 2.2E-13 98.7 10.3 81 256-337 200-286 (292)
45 KOG3216 Diamine acetyltransfer 98.8 1.1E-07 2.3E-12 88.5 14.3 129 207-336 2-143 (163)
46 PRK01346 hypothetical protein; 98.8 1.3E-07 2.8E-12 96.3 14.4 80 254-336 47-133 (411)
47 COG3153 Predicted acetyltransf 98.7 8.8E-08 1.9E-12 90.0 10.2 80 254-337 46-129 (171)
48 COG1247 Sortase and related ac 98.7 1.1E-07 2.4E-12 89.2 10.2 102 257-362 55-164 (169)
49 PF13302 Acetyltransf_3: Acety 98.6 2.8E-07 6.2E-12 77.9 10.8 80 255-335 57-142 (142)
50 KOG3396 Glucosamine-phosphate 98.6 2.1E-07 4.5E-12 85.3 10.2 125 207-337 5-142 (150)
51 PF08445 FR47: FR47-like prote 98.6 4.2E-07 9.1E-12 75.3 9.1 57 280-337 22-80 (86)
52 cd04301 NAT_SF N-Acyltransfera 98.5 6.2E-07 1.4E-11 63.4 8.5 62 257-319 2-64 (65)
53 TIGR01211 ELP3 histone acetylt 98.5 8E-07 1.7E-11 95.7 10.8 83 254-337 411-514 (522)
54 KOG2488 Acetyltransferase (GNA 98.4 6.4E-07 1.4E-11 85.9 8.3 81 257-338 95-181 (202)
55 KOG3138 Predicted N-acetyltran 98.4 1.1E-06 2.3E-11 83.9 7.6 121 208-340 16-153 (187)
56 PF14542 Acetyltransf_CG: GCN5 98.3 2.3E-06 5E-11 70.3 8.4 71 257-332 2-72 (78)
57 PF13718 GNAT_acetyltr_2: GNAT 98.3 7.3E-06 1.6E-10 78.7 10.9 94 242-336 15-173 (196)
58 COG1670 RimL Acetyltransferase 98.2 1.4E-05 3.1E-10 69.4 11.5 79 263-342 77-161 (187)
59 COG3393 Predicted acetyltransf 98.2 8.3E-06 1.8E-10 81.5 9.8 83 253-337 176-260 (268)
60 KOG3397 Acetyltransferases [Ge 98.2 1.1E-05 2.4E-10 77.1 10.0 133 226-381 25-162 (225)
61 COG5076 Transcription factor i 98.1 2.7E-07 5.8E-12 94.6 -2.7 183 204-387 19-210 (371)
62 KOG3235 Subunit of the major N 98.1 2.6E-05 5.6E-10 73.7 10.4 119 236-359 19-150 (193)
63 KOG3234 Acetyltransferase, (GN 98.0 1.7E-05 3.8E-10 74.4 7.9 80 262-342 50-134 (173)
64 COG2153 ElaA Predicted acyltra 97.9 3.3E-05 7.2E-10 71.7 7.8 81 256-337 51-134 (155)
65 COG0454 WecD Histone acetyltra 97.9 1.2E-05 2.6E-10 58.9 3.7 44 285-334 87-130 (156)
66 COG1444 Predicted P-loop ATPas 97.8 9.9E-05 2.2E-09 82.8 10.9 135 198-340 412-591 (758)
67 PF12746 GNAT_acetyltran: GNAT 97.8 0.00026 5.6E-09 70.8 12.3 81 254-337 165-245 (265)
68 PF12568 DUF3749: Acetyltransf 97.5 0.0012 2.6E-08 60.1 11.6 115 209-337 2-123 (128)
69 PF13480 Acetyltransf_6: Acety 97.5 0.0069 1.5E-07 51.0 15.6 113 201-318 12-132 (142)
70 COG3053 CitC Citrate lyase syn 97.4 0.00071 1.5E-08 69.2 9.7 72 262-340 45-116 (352)
71 COG3981 Predicted acetyltransf 97.4 0.00039 8.5E-09 66.0 6.9 80 256-337 70-157 (174)
72 COG4552 Eis Predicted acetyltr 97.3 0.001 2.2E-08 69.3 8.8 101 231-336 18-124 (389)
73 COG2388 Predicted acetyltransf 96.8 0.0044 9.5E-08 54.1 7.0 62 254-317 15-76 (99)
74 PF00765 Autoind_synth: Autoin 96.3 0.057 1.2E-06 51.2 11.9 104 250-361 40-170 (182)
75 PRK13834 putative autoinducer 96.3 0.083 1.8E-06 50.9 13.2 144 210-361 2-180 (207)
76 TIGR03694 exosort_acyl putativ 96.2 0.052 1.1E-06 53.3 11.4 107 230-337 27-196 (241)
77 KOG4135 Predicted phosphogluco 96.0 0.018 3.8E-07 54.5 6.3 57 281-337 109-168 (185)
78 PF06852 DUF1248: Protein of u 95.6 0.18 3.9E-06 48.4 11.8 85 250-336 41-134 (181)
79 KOG4144 Arylalkylamine N-acety 95.4 0.014 3.1E-07 55.4 3.6 56 280-336 102-158 (190)
80 COG1243 ELP3 Histone acetyltra 95.0 0.022 4.9E-07 61.4 4.1 48 289-337 460-507 (515)
81 PF01233 NMT: Myristoyl-CoA:pr 94.9 0.21 4.6E-06 47.4 9.6 77 241-318 61-148 (162)
82 cd04264 DUF619-NAGS DUF619 dom 94.6 0.16 3.5E-06 44.2 7.7 31 277-307 32-62 (99)
83 PF08444 Gly_acyl_tr_C: Aralky 94.0 0.08 1.7E-06 45.7 4.4 69 262-336 7-77 (89)
84 COG3882 FkbH Predicted enzyme 93.9 0.31 6.7E-06 53.3 9.5 127 208-337 411-548 (574)
85 COG5628 Predicted acetyltransf 93.6 0.32 7E-06 44.7 7.6 83 251-336 34-120 (143)
86 KOG2535 RNA polymerase II elon 93.3 0.086 1.9E-06 55.7 4.1 48 290-337 498-545 (554)
87 COG3916 LasI N-acyl-L-homoseri 93.2 1.4 3E-05 43.5 11.8 122 230-361 25-178 (209)
88 cd04265 DUF619-NAGS-U DUF619 d 93.0 0.65 1.4E-05 40.5 8.4 31 278-308 33-63 (99)
89 TIGR03019 pepcterm_femAB FemAB 92.7 3.5 7.5E-05 41.5 14.3 100 235-337 174-279 (330)
90 TIGR03827 GNAT_ablB putative b 92.4 0.58 1.3E-05 45.8 8.2 65 294-365 20-84 (266)
91 PF13880 Acetyltransf_13: ESCO 92.0 0.21 4.5E-06 41.4 3.8 31 279-309 5-35 (70)
92 PF05301 Mec-17: Touch recepto 90.7 1.4 3.1E-05 40.1 8.2 50 282-332 49-98 (120)
93 PF01853 MOZ_SAS: MOZ/SAS fami 89.4 3.6 7.8E-05 40.0 10.2 92 206-310 12-111 (188)
94 COG3818 Predicted acetyltransf 86.8 2.4 5.3E-05 39.8 7.1 60 277-337 82-146 (167)
95 PLN03238 probable histone acet 85.0 9.2 0.0002 39.5 10.8 94 206-313 87-188 (290)
96 KOG2036 Predicted P-loop ATPas 83.7 0.89 1.9E-05 51.9 3.2 30 280-309 615-644 (1011)
97 PLN03239 histone acetyltransfe 83.4 7.3 0.00016 41.2 9.5 92 206-310 145-244 (351)
98 KOG2747 Histone acetyltransfer 82.9 3.1 6.8E-05 44.5 6.7 98 200-310 188-291 (396)
99 PTZ00064 histone acetyltransfe 82.4 7.8 0.00017 42.9 9.5 94 206-313 316-417 (552)
100 PRK01305 arginyl-tRNA-protein 82.0 60 0.0013 32.7 15.8 116 200-318 86-205 (240)
101 PLN00104 MYST -like histone ac 77.4 8.3 0.00018 42.0 7.8 89 209-310 241-337 (450)
102 KOG2779 N-myristoyl transferas 74.7 8 0.00017 41.3 6.6 53 262-315 144-202 (421)
103 TIGR03244 arg_catab_AstA argin 73.3 20 0.00044 37.8 9.2 29 324-361 232-260 (336)
104 PF13444 Acetyltransf_5: Acety 71.9 7.9 0.00017 32.8 4.9 53 249-301 25-100 (101)
105 PRK10456 arginine succinyltran 70.4 24 0.00053 37.3 9.0 29 324-361 234-262 (344)
106 COG3375 Uncharacterized conser 66.0 80 0.0017 32.3 11.1 109 225-335 17-133 (266)
107 PF04377 ATE_C: Arginine-tRNA- 65.8 64 0.0014 29.4 9.7 73 243-318 26-100 (128)
108 TIGR03243 arg_catab_AOST argin 65.4 32 0.0007 36.3 8.6 29 324-361 232-260 (335)
109 KOG3014 Protein involved in es 62.7 42 0.0009 34.4 8.5 98 208-309 88-213 (257)
110 PF09026 CENP-B_dimeris: Centr 61.6 2.7 5.7E-05 37.3 0.0 10 109-118 40-49 (101)
111 cd03173 DUF619-like DUF619 dom 60.8 52 0.0011 28.9 7.8 31 277-307 31-61 (98)
112 PRK14852 hypothetical protein; 59.9 82 0.0018 37.8 11.5 58 278-336 120-178 (989)
113 PF04768 DUF619: Protein of un 58.8 63 0.0014 30.8 8.6 82 241-329 51-134 (170)
114 PF09026 CENP-B_dimeris: Centr 52.2 5.3 0.00011 35.4 0.3 10 84-93 9-18 (101)
115 COG2401 ABC-type ATPase fused 50.6 6.7 0.00015 43.1 0.8 56 280-336 242-305 (593)
116 COG5027 SAS2 Histone acetyltra 50.0 16 0.00034 39.1 3.3 90 203-305 191-288 (395)
117 cd04266 DUF619-NAGS-FABP DUF61 47.1 99 0.0022 27.7 7.5 31 277-307 37-68 (108)
118 KOG2696 Histone acetyltransfer 46.3 22 0.00047 38.2 3.7 45 265-309 200-247 (403)
119 KOG4264 Nucleo-cytoplasmic pro 46.2 21 0.00046 40.0 3.7 21 235-255 220-240 (694)
120 PF02388 FemAB: FemAB family; 42.2 74 0.0016 33.7 7.0 78 257-336 38-137 (406)
121 PF11124 Pho86: Inorganic phos 41.9 1E+02 0.0022 32.4 7.6 82 255-336 170-268 (304)
122 PF09924 DUF2156: Uncharacteri 38.9 4E+02 0.0088 26.4 13.4 116 200-318 123-243 (299)
123 PF04339 DUF482: Protein of un 37.5 5.4E+02 0.012 27.5 14.7 135 178-318 168-311 (370)
124 COG2898 Uncharacterized conser 36.1 3.9E+02 0.0084 30.2 11.4 138 175-318 312-455 (538)
125 PF11039 DUF2824: Protein of u 35.7 4E+02 0.0086 25.4 9.8 91 262-360 45-138 (151)
126 COG5630 ARG2 Acetylglutamate s 35.2 1.1E+02 0.0024 33.5 6.8 84 219-308 340-430 (495)
127 PF15387 DUF4611: Domain of un 34.8 28 0.0006 30.8 2.0 21 94-114 64-84 (96)
128 PRK02983 lysS lysyl-tRNA synth 33.3 5E+02 0.011 31.7 12.5 128 186-317 348-481 (1094)
129 PF04339 DUF482: Protein of un 32.3 1.1E+02 0.0024 32.6 6.4 52 285-337 106-158 (370)
130 KOG3130 Uncharacterized conser 31.7 25 0.00053 38.3 1.4 10 231-240 352-361 (514)
131 KOG4601 Uncharacterized conser 31.6 37 0.00079 34.6 2.5 48 280-331 109-159 (264)
132 PRK04531 acetylglutamate kinas 31.5 1.7E+02 0.0038 31.3 7.7 32 277-308 308-339 (398)
133 PTZ00450 macrophage migration 30.3 2.6E+02 0.0055 24.9 7.4 82 221-322 16-102 (113)
134 COG5092 NMT1 N-myristoyl trans 29.1 1.7E+02 0.0037 31.4 7.0 70 241-310 116-196 (451)
135 KOG0772 Uncharacterized conser 28.1 45 0.00097 37.5 2.7 32 326-367 439-470 (641)
136 PF03588 Leu_Phe_trans: Leucyl 27.9 3.8E+02 0.0082 25.9 8.6 102 198-317 43-154 (173)
137 KOG1832 HIV-1 Vpr-binding prot 26.1 34 0.00074 40.8 1.4 9 86-94 1404-1412(1516)
138 TIGR00667 aat leucyl/phenylala 24.8 3.1E+02 0.0067 27.0 7.4 103 198-318 45-155 (185)
139 PF04958 AstA: Arginine N-succ 23.9 1.5E+02 0.0032 31.5 5.5 47 254-300 59-142 (342)
140 PF11090 DUF2833: Protein of u 23.5 1.6E+02 0.0034 25.8 4.6 42 294-336 39-81 (86)
141 PF10446 DUF2457: Protein of u 22.6 44 0.00096 36.6 1.4 21 416-440 422-447 (458)
142 COG5665 NOT5 CCR4-NOT transcri 22.3 1.8E+02 0.0039 31.9 5.7 33 11-43 197-229 (548)
143 COG5482 Uncharacterized conser 21.7 1.1E+02 0.0023 30.5 3.6 51 325-380 10-64 (229)
144 PF12261 T_hemolysin: Thermost 21.4 1.5E+02 0.0032 28.7 4.5 55 277-336 85-139 (179)
145 PRK11611 enhanced serine sensi 21.2 2.2E+02 0.0047 29.0 5.8 108 192-304 103-227 (246)
146 KOG0943 Predicted ubiquitin-pr 20.5 90 0.0019 38.8 3.3 6 220-225 1878-1883(3015)
No 1
>KOG1472 consensus Histone acetyltransferase SAGA/ADA, catalytic subunit PCAF/GCN5 and related proteins [Chromatin structure and dynamics; Transcription]
Probab=100.00 E-value=1.3e-44 Score=390.23 Aligned_cols=259 Identities=44% Similarity=0.767 Sum_probs=237.3
Q ss_pred CccchhhHHHHHHHhcCcEEEEEecCCCc----hhhHHHHHHHHHHHhhcCCCCcHHHHHHHhhcCCceEEEEEECCE-E
Q 012402 191 GAYSAREELLKREEEAGNLKFVCLSNDGI----DEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRGNV-V 265 (464)
Q Consensus 191 ~~~~~rd~~a~~eE~~G~I~f~vv~Nd~~----~~~liwL~~LkniFskQLPkMpkEYI~RLVfD~~h~s~VlikdGk-V 265 (464)
-....|++.+..||..|.|.|++|.|+.+ ....+||.+++++|++|||+||++||.|++||..|.+++++.+++ |
T Consensus 352 ~~~~~n~~~~n~ee~~~~~~~~vv~~~~s~~~~~~~~~~li~~~~~f~~qL~empkEyi~rlv~d~~h~~~~~~~d~~g~ 431 (720)
T KOG1472|consen 352 MLIWRNCEKYNSEESHGLIEFAVIMNSKSLALIKEIPIELIGLRNEFSKQLPEMPKEYISRLVFDTSHHVMARIKDNEGV 431 (720)
T ss_pred HHHHhcchhhccccchhhhhhhhhhccCcHhHhccchhhhccchhHHHhhcccchHHHHHhhccccccccceeecccccc
Confidence 34567999999999999999999999987 678899999999999999999999999999999999999998765 9
Q ss_pred EEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCC-CcEEEEccCccchhhhhhcCCeEeeeccccc
Q 012402 266 VGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDG-LTHFLTYADNNAVGYFIKQGFTKEIYLEKDR 344 (464)
Q Consensus 266 IGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~G-i~~LLTyADn~AIgFYkKqGFtkeI~lpk~i 344 (464)
|||||+|+|+.++|.||+||||+.+.|.+|||++||+|++++.+. .+ +.++++|+|+.|+++|+||||+++|.+++.+
T Consensus 432 vggi~~r~f~~k~f~eivf~av~~~eqv~g~g~hlmnhlkd~~~~-~~~i~~~ltyad~~aigyfkkqgfs~ei~~~~~~ 510 (720)
T KOG1472|consen 432 VGGICFRPFPEKGFTEIVFCAVTTDEQVKGSGTHLMNHLKDYVRS-SSTIDYALTYADEGAIGYFKKQGFSKEIKFEKSP 510 (720)
T ss_pred ccccccCcCcccCCcceeeccccCcccccccCcCchhhHHHHhhc-cchHHHHHHhhhhcccccccCccchhhcccccCc
Confidence 999999999999999999999999999999999999999999998 55 8899999999999999999999999999999
Q ss_pred ccccccCCCCceeeeeecCCCCCCcCHHHHHH-HHHHHHHHHHH-hhhccccccCCcchhccccCCCCcccCCCCCcchh
Q 012402 345 WQGYIKDYDGGILMECKIDPKLPYTDLSTMIR-RQRQAIDEKIR-ELSNCHIVYPGIDFQKKEAGVPKKIIKVEDIPGLR 422 (464)
Q Consensus 345 w~GyIKDYEgatLMEC~L~Pki~Y~~l~~mI~-~Qk~~l~~ki~-~~~~~~~v~~gl~~~~~~~g~~~~~i~~~~IPGl~ 422 (464)
|.||||+|++||+|.|.+.|.|+|+++..++. .|+..+.++|. .+..+++|||||.||+. |+ +.+++..|||++
T Consensus 511 ~~g~ikdye~~tl~~c~l~~~i~~t~~~~~~~~~~~a~l~~~i~~~~~~~~kv~~gl~~~~~--~~--~~~~~~~iPg~~ 586 (720)
T KOG1472|consen 511 YVGYIKDYEGGTLMPCELLPEIPYTELSAIVEHPQKAKLGREIEPEIDEYFKVYPGLECFKD--GV--PQIPPRKIPGFR 586 (720)
T ss_pred CccccccccCccccchhhccCcchhhhhhhhhhhHHHHHHHhhccccccccccccccccccc--cc--cccCcccCCCch
Confidence 99999999999999999999999999999999 99999999999 77999999999999997 44 679999999999
Q ss_pred ccCCCCCCcCCCcccccccccCCccchHHHHHHHHHHHHhh
Q 012402 423 EAGWTPDQWGHSRFRTLTAATDGASNQKHLTAFMRSLLKAS 463 (464)
Q Consensus 423 e~GW~p~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~l~~~~ 463 (464)
|+||.|.+....+ .......++..++.+|..+
T Consensus 587 E~~~~~~~~~~r~---------~~~~~~~~~s~~~~il~~l 618 (720)
T KOG1472|consen 587 ESGWKPEKESYRQ---------EYKKPGKLFSAIQNILDQL 618 (720)
T ss_pred hhccCcchHHHHh---------hhcccchhhHHHHhHHhhh
Confidence 9999999776443 1133456777777777653
No 2
>PRK07757 acetyltransferase; Provisional
Probab=99.58 E-value=6.2e-14 Score=121.89 Aligned_cols=106 Identities=24% Similarity=0.371 Sum_probs=87.1
Q ss_pred EEEEEECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcCCe
Q 012402 256 SVMVIRGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFT 335 (464)
Q Consensus 256 s~VlikdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqGFt 335 (464)
.+++..+|++||.+.+... +....+|..++|+|++||+|+|+.||.++++++++ .|+..++... .+..||+|+||+
T Consensus 43 ~~i~~~~~~lvG~~~l~~~-~~~~~~i~~v~V~p~~rg~Glg~~Ll~~l~~~a~~-~g~~~i~~~~--~~~~~Y~k~GF~ 118 (152)
T PRK07757 43 FYVAEEEGEIVGCCALHIL-WEDLAEIRSLAVSEDYRGQGIGRMLVEACLEEARE-LGVKRVFALT--YQPEFFEKLGFR 118 (152)
T ss_pred EEEEEECCEEEEEEEEEec-cCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHh-CCCCeEEEEe--CcHHHHHHCCCE
Confidence 4555678999998887653 34567899999999999999999999999999997 8988875543 357899999997
Q ss_pred E--eeecccccccccccCCCCceeeeeecCCCCCCcCHHHHHHH
Q 012402 336 K--EIYLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRR 377 (464)
Q Consensus 336 k--eI~lpk~iw~GyIKDYEgatLMEC~L~Pki~Y~~l~~mI~~ 377 (464)
. ...++.++|.+ |.++|+.+.|+...||..
T Consensus 119 ~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~ 150 (152)
T PRK07757 119 EVDKEALPQKVWAD------------CIKCPKFPNCDEIAMIKE 150 (152)
T ss_pred EcccccCChhHHhc------------CccCCCCCCcchhhhhhh
Confidence 7 34568889988 667788899999999864
No 3
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.48 E-value=2.7e-13 Score=115.76 Aligned_cols=91 Identities=18% Similarity=0.274 Sum_probs=69.4
Q ss_pred HHHHhhcCCceEEEEEECCEEEEEEEEEEecC----CceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEE--
Q 012402 245 IVRLVMDRSHKSVMVIRGNVVVGGITYRPYVS----QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFL-- 318 (464)
Q Consensus 245 I~RLVfD~~h~s~VlikdGkVIGGI~~R~f~~----~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LL-- 318 (464)
+...+.++....+++..++++||++.+..... ..+++|..++|+|++||||||+.||++++++|++ .|+..+.
T Consensus 38 ~~~~l~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~i~~l~v~p~~rg~GiG~~Ll~~~~~~a~~-~~~~~i~l~ 116 (144)
T PRK10146 38 FNANLRDPNMRYHLALLDGEVVGMIGLHLQFHLHHVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQ-AGAEMTELS 116 (144)
T ss_pred HHHHhcCCCceEEEEEECCEEEEEEEEEecccccccchhheeheeEECHHHcCCCHHHHHHHHHHHHHHH-cCCcEEEEe
Confidence 33344445555566667899999888764321 1246899999999999999999999999999998 8998654
Q ss_pred EccCc-cchhhhhhcCCeE
Q 012402 319 TYADN-NAVGYFIKQGFTK 336 (464)
Q Consensus 319 TyADn-~AIgFYkKqGFtk 336 (464)
+..+| .|++||+|+||+.
T Consensus 117 ~~~~n~~a~~fY~~~Gf~~ 135 (144)
T PRK10146 117 TNVKRHDAHRFYLREGYEQ 135 (144)
T ss_pred cCCCchHHHHHHHHcCCch
Confidence 34344 6999999999976
No 4
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.44 E-value=6.5e-13 Score=105.10 Aligned_cols=77 Identities=23% Similarity=0.471 Sum_probs=62.5
Q ss_pred ceEEEEEECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcC
Q 012402 254 HKSVMVIRGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQG 333 (464)
Q Consensus 254 h~s~VlikdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqG 333 (464)
+..+++..++++||++++... ..++.|..++|+|++||||||++||+++++.++. ..+.++++..++.||+|+|
T Consensus 3 ~~~~~~~~~~~ivG~~~~~~~--~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~----~~i~l~~~~~~~~fY~~~G 76 (79)
T PF13508_consen 3 ERFFVAEDDGEIVGFIRLWPN--EDFAYIGYLAVDPEYRGKGIGSKLLNYLLEKAKS----KKIFLFTNPAAIKFYEKLG 76 (79)
T ss_dssp EEEEEEEETTEEEEEEEEEET--TTEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTC----SEEEEEEEHHHHHHHHHTT
T ss_pred cEEEEEEECCEEEEEEEEEEc--CCEEEEEEEEECHHHcCCCHHHHHHHHHHHHcCC----CcEEEEEcHHHHHHHHHCc
Confidence 345667779999999888654 4478999999999999999999999999999864 3345555667999999999
Q ss_pred CeE
Q 012402 334 FTK 336 (464)
Q Consensus 334 Ftk 336 (464)
|++
T Consensus 77 F~~ 79 (79)
T PF13508_consen 77 FEE 79 (79)
T ss_dssp EEE
T ss_pred CCC
Confidence 974
No 5
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=99.44 E-value=2.3e-12 Score=111.51 Aligned_cols=149 Identities=14% Similarity=0.158 Sum_probs=93.9
Q ss_pred CcEEEEEecCCCchhhHHHHHHHHHHHhh--cCCCCcHHHHHHHhhc-CCceEEEEEECCEEEEEEEEEEecC---CceE
Q 012402 207 GNLKFVCLSNDGIDEHMVWLIGLKNIFAR--QLPNMPKEYIVRLVMD-RSHKSVMVIRGNVVVGGITYRPYVS---QKFG 280 (464)
Q Consensus 207 G~I~f~vv~Nd~~~~~liwL~~LkniFsk--QLPkMpkEYI~RLVfD-~~h~s~VlikdGkVIGGI~~R~f~~---~~fa 280 (464)
+.|.|+.++-++.+....|.... .+|.. ..|....+.+.+.+-+ .....+++..+|++||++++..... ....
T Consensus 2 ~~i~lr~~~~~D~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~ 80 (162)
T PRK10140 2 SEIVIRHAETRDYEAIRQIHAQP-EVYHNTLQVPHPSDHMWQERLADRPGIKQLVACIDGDVVGHLTIDVQQRPRRSHVA 80 (162)
T ss_pred CccEEEecchhhHHHHHHHHhCc-ccccccccCCCcCHHHHHHHhhcCCCcEEEEEEECCEEEEEEEEecccccccceEE
Confidence 45788888766555444444321 11111 1333344444444333 3334566667899999988764321 2234
Q ss_pred EEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEE--EccCc-cchhhhhhcCCeEeeecccccccccccCCCCcee
Q 012402 281 EIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFL--TYADN-NAVGYFIKQGFTKEIYLEKDRWQGYIKDYDGGIL 357 (464)
Q Consensus 281 EIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LL--TyADn-~AIgFYkKqGFtkeI~lpk~iw~GyIKDYEgatL 357 (464)
|+ .++|+|++||||||+.||+++++++++..++..+. ++.+| .|+.||+|+||+....+++..+.+ ..|.+..+
T Consensus 81 ~~-~~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~~~~~~~--~~~~d~~~ 157 (162)
T PRK10140 81 DF-GICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFEIEGTGKKYALRN--GEYVDAYY 157 (162)
T ss_pred EE-EEEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHHHHHHCCCEEEeecccceeeC--CeEEEEEE
Confidence 43 48999999999999999999999998745777643 45555 589999999999876655433221 23555555
Q ss_pred ee
Q 012402 358 ME 359 (464)
Q Consensus 358 ME 359 (464)
|+
T Consensus 158 ~~ 159 (162)
T PRK10140 158 MA 159 (162)
T ss_pred EE
Confidence 55
No 6
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=99.43 E-value=1.6e-12 Score=107.02 Aligned_cols=88 Identities=23% Similarity=0.377 Sum_probs=72.4
Q ss_pred CcHHHHHHHhhcCCceEEEEEECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEE
Q 012402 240 MPKEYIVRLVMDRSHKSVMVIRGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLT 319 (464)
Q Consensus 240 MpkEYI~RLVfD~~h~s~VlikdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLT 319 (464)
+..+++.+++-++.+..+++..+++|||++.+. .. .+|..++|+|++||+|+|++||+++++.++. ++..+.+
T Consensus 30 ~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~--~~---~~i~~l~v~p~~r~~Gig~~Ll~~~~~~~~~--~~~~l~~ 102 (117)
T PF13673_consen 30 YSPEDLEEYLEEGSHTIFVAEEGGEIVGFAWLE--PD---GEISHLYVLPEYRGRGIGRALLDAAEKEAKD--GIRRLTV 102 (117)
T ss_dssp SSHHHHHHHHCTCCCEEEEEEETTEEEEEEEEE--TC---EEEEEEEE-GGGTTSSHHHHHHHHHHHHHTT--TCEEEEE
T ss_pred cCHHHHHHHHHhcCCEEEEEEECCEEEEEEEEc--CC---CeEEEEEEChhhcCCcHHHHHHHHHHHHHHc--CCcEEEE
Confidence 567888888877667778888899999998875 22 3588899999999999999999999999963 8888777
Q ss_pred ccCccchhhhhhcCC
Q 012402 320 YADNNAVGYFIKQGF 334 (464)
Q Consensus 320 yADn~AIgFYkKqGF 334 (464)
.++..|..||+|+||
T Consensus 103 ~~~~~a~~~y~~~GF 117 (117)
T PF13673_consen 103 EANERARRFYRKLGF 117 (117)
T ss_dssp EC-HHHHHHHHHTT-
T ss_pred EeCHHHHHHHHhCCC
Confidence 777789999999999
No 7
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=99.40 E-value=1.8e-12 Score=100.93 Aligned_cols=75 Identities=24% Similarity=0.380 Sum_probs=65.1
Q ss_pred EECCEEEEEEEEEEecCC----ceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEE--ccCc-cchhhhhhc
Q 012402 260 IRGNVVVGGITYRPYVSQ----KFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLT--YADN-NAVGYFIKQ 332 (464)
Q Consensus 260 ikdGkVIGGI~~R~f~~~----~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLT--yADn-~AIgFYkKq 332 (464)
.++|+|||++.+.+.... ..+.|..++|+|+|||+|||+.||+++++.+++ .|+..+.+ ..+| .+..||+|+
T Consensus 2 ~~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~-~g~~~i~~~~~~~n~~~~~~~~k~ 80 (83)
T PF00583_consen 2 EEDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARK-RGIKRIYLDVSPDNPAARRFYEKL 80 (83)
T ss_dssp EETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHH-TTESEEEEEEETTGHHHHHHHHHT
T ss_pred cCCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHh-cCccEEEEEEeCCCHHHHHHHHHc
Confidence 468999999998886653 689999999999999999999999999999998 89997754 3344 489999999
Q ss_pred CCe
Q 012402 333 GFT 335 (464)
Q Consensus 333 GFt 335 (464)
||+
T Consensus 81 Gf~ 83 (83)
T PF00583_consen 81 GFE 83 (83)
T ss_dssp TEE
T ss_pred CCC
Confidence 996
No 8
>PTZ00330 acetyltransferase; Provisional
Probab=99.40 E-value=7.7e-12 Score=107.16 Aligned_cols=123 Identities=18% Similarity=0.272 Sum_probs=83.2
Q ss_pred cEEEEEecCCCchhhHHHHHHHHHHHhhcCCCCcHHHHHHHhhc---CC-ceEEEEE-ECCEEEEEEEEEEec-----CC
Q 012402 208 NLKFVCLSNDGIDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMD---RS-HKSVMVI-RGNVVVGGITYRPYV-----SQ 277 (464)
Q Consensus 208 ~I~f~vv~Nd~~~~~liwL~~LkniFskQLPkMpkEYI~RLVfD---~~-h~s~Vli-kdGkVIGGI~~R~f~-----~~ 277 (464)
.|+|+.++.++.+...-+... +.. -|.++.+.+.++... .. ...+++. .+|++||++.+...+ ..
T Consensus 6 ~~~ir~~~~~D~~~i~~l~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~ 80 (147)
T PTZ00330 6 SLELRDLEEGDLGSVLELLSH---LTS--APALSQEELEQIAARRRLAGVVTRVFVHSPTQRIVGTASLFVEPKFTRGGK 80 (147)
T ss_pred eEEEEEcccccHHHHHHHHHH---hcC--CCccchhHHHHHHHHHhcCCCceEEEEEeCCCEEEEEEEEEeccccccCCC
Confidence 477888876665544433322 221 122344445443321 11 1223333 468999988764321 11
Q ss_pred ceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcCCeE
Q 012402 278 KFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTK 336 (464)
Q Consensus 278 ~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqGFtk 336 (464)
.+.+|..+.|+|++||+|||+.||+++++++++ .++..++...+..|+.||+|+||+.
T Consensus 81 ~~~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~-~~~~~l~l~~n~~a~~~y~k~GF~~ 138 (147)
T PTZ00330 81 CVGHIEDVVVDPSYRGQGLGRALISDLCEIARS-SGCYKVILDCTEDMVAFYKKLGFRA 138 (147)
T ss_pred ceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHH-CCCCEEEEecChHHHHHHHHCCCEE
Confidence 246888999999999999999999999999998 8988877666667999999999986
No 9
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.38 E-value=1.9e-12 Score=119.33 Aligned_cols=130 Identities=22% Similarity=0.354 Sum_probs=97.4
Q ss_pred EEEecCCCchhhHHHHHHHHHHHhhc---CCCCcHHHHHHHhhcCCceEEEEEECCEEEEEEEEEEecCCceEEEEEEEe
Q 012402 211 FVCLSNDGIDEHMVWLIGLKNIFARQ---LPNMPKEYIVRLVMDRSHKSVMVIRGNVVVGGITYRPYVSQKFGEIAFCAI 287 (464)
Q Consensus 211 f~vv~Nd~~~~~liwL~~LkniFskQ---LPkMpkEYI~RLVfD~~h~s~VlikdGkVIGGI~~R~f~~~~faEIvfIAV 287 (464)
+|..++.+.+ ++..|..-|..| ||+ +++.++..+- .-.++.++|+|||++...++.+.+..||..+||
T Consensus 3 iR~A~~~Di~----~I~~Li~~~~~~gil~~r-s~~~le~~i~----dF~i~E~~g~viGC~aL~~~~~~~~gE~~~laV 73 (153)
T COG1246 3 IRKARISDIP----AILELIRPLELQGILLRR-SREQLEEEID----DFTIIERDGKVIGCAALHPVLEEDLGELRSLAV 73 (153)
T ss_pred eeeccccchH----HHHHHHHHHhhccccchh-hHHHHHHHHh----hheeeeeCCcEEEEEeecccCccCeeeEEEEEE
Confidence 4444444433 455555556665 343 5666766652 224555689999988888778889999999999
Q ss_pred CCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcCCeEe--eecccccccccccC
Q 012402 288 TADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTKE--IYLEKDRWQGYIKD 351 (464)
Q Consensus 288 sps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqGFtke--I~lpk~iw~GyIKD 351 (464)
+|++|++|+|.+||++++..|++ .|+..+...+ +++..||+++||+.. -.+|.++|..|...
T Consensus 74 ~pd~r~~G~G~~Ll~~~~~~Ar~-~gi~~lf~LT-t~~~~~F~~~GF~~vd~~~LP~~~~~~~~~~ 137 (153)
T COG1246 74 HPDYRGSGRGERLLERLLADARE-LGIKELFVLT-TRSPEFFAERGFTRVDKDELPEEVWSSYNFC 137 (153)
T ss_pred CHHhcCCCcHHHHHHHHHHHHHH-cCCceeeeee-cccHHHHHHcCCeECccccCCHHHHHHHHhh
Confidence 99999999999999999999998 9999654322 168999999999663 25899999888643
No 10
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=99.37 E-value=7.8e-12 Score=121.18 Aligned_cols=144 Identities=13% Similarity=0.166 Sum_probs=100.4
Q ss_pred cEEEEEecCCCchhhHHHHHHHHHHHhhc-CCCCcHHHHHHHhhcCCceEEEEEECCEEEEEEEEEEecCCceEEEEEEE
Q 012402 208 NLKFVCLSNDGIDEHMVWLIGLKNIFARQ-LPNMPKEYIVRLVMDRSHKSVMVIRGNVVVGGITYRPYVSQKFGEIAFCA 286 (464)
Q Consensus 208 ~I~f~vv~Nd~~~~~liwL~~LkniFskQ-LPkMpkEYI~RLVfD~~h~s~VlikdGkVIGGI~~R~f~~~~faEIvfIA 286 (464)
.+.|+.++.++.+....+. ..+|... .|....+|+.+.+. .....+++..+|++||.+++........+||..|+
T Consensus 115 ~~~IR~a~~~D~~~l~~L~---~~v~~~~~~~~~~~~~l~~~~~-~~~~~~v~~~~g~iVG~~~~~~~~~~~~~eI~~i~ 190 (266)
T TIGR03827 115 GFTLRIATEDDADAMAALY---RKVFPTYPFPIHDPAYLLETMK-SNVVYFGVEDGGKIIALASAEMDPENGNAEMTDFA 190 (266)
T ss_pred ceEEEECCHHHHHHHHHHH---HHHhccCCCCccCHHHHHHHhc-CCcEEEEEEECCEEEEEEEEecCCCCCcEEEEEEE
Confidence 4778887655544433333 2345322 33445688877653 44445666678999998886544445668999999
Q ss_pred eCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEc--cCc-cchhhhhhcCCeEeeecccccccccc-cCCCCceeee
Q 012402 287 ITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTY--ADN-NAVGYFIKQGFTKEIYLEKDRWQGYI-KDYDGGILME 359 (464)
Q Consensus 287 Vsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTy--ADn-~AIgFYkKqGFtkeI~lpk~iw~GyI-KDYEgatLME 359 (464)
|+|+|||+|||+.||+++++.+++ .|+..+.+. +.| .|..||+|+||....+++.. .++ -.|++.-+|.
T Consensus 191 V~P~yRG~GiG~~Ll~~l~~~a~~-~g~~~l~~~~~~~n~~a~~ly~k~GF~~~G~l~n~---~~i~G~~~d~~i~~ 263 (266)
T TIGR03827 191 TLPEYRGKGLAKILLAAMEKEMKE-KGIRTAYTIARASSYGMNITFARLGYAYGGTLVNN---TNISGGFESMNIWY 263 (266)
T ss_pred ECHHHcCCCHHHHHHHHHHHHHHH-CCCcEEEeehhhcchhHHHHHHHcCCccccEEeec---ceecCCcccceeee
Confidence 999999999999999999999998 899977653 334 58999999999987666542 123 3455555444
No 11
>PRK03624 putative acetyltransferase; Provisional
Probab=99.36 E-value=1.5e-11 Score=102.55 Aligned_cols=123 Identities=16% Similarity=0.229 Sum_probs=81.2
Q ss_pred EEEEEecCCCchhhHHHHHHHHHHHhhcCCCCcHHHHHHHhhcCCceEEEEEECCEEEEEEEEEEecCCceEEEEEEEeC
Q 012402 209 LKFVCLSNDGIDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRGNVVVGGITYRPYVSQKFGEIAFCAIT 288 (464)
Q Consensus 209 I~f~vv~Nd~~~~~liwL~~LkniFskQLPkMpkEYI~RLVfD~~h~s~VlikdGkVIGGI~~R~f~~~~faEIvfIAVs 288 (464)
|.|+.++.++.+....+.... . +..... -+...+...+.......+++..++++||.+++... .....|..++|+
T Consensus 3 ~~ir~~~~~d~~~i~~l~~~~-~-~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~--~~~~~i~~i~v~ 77 (140)
T PRK03624 3 MEIRVFRQADFEAVIALWERC-D-LTRPWN-DPEMDIERKLNHDPSLFLVAEVGGEVVGTVMGGYD--GHRGWAYYLAVH 77 (140)
T ss_pred eEEEEcccccHHHHHHHHHhc-C-CCcchh-hHHHHHHHHhcCCCceEEEEEcCCcEEEEEEeecc--CCCceEEEEEEC
Confidence 677777766655443333222 0 000000 12223333333444555666678999998876532 223457789999
Q ss_pred CCccccCHHHHHHHHHHHHHHhhCCCcEEEE--ccCc-cchhhhhhcCCeEe
Q 012402 289 ADEQVKGYGTRLMNHLKQHARDVDGLTHFLT--YADN-NAVGYFIKQGFTKE 337 (464)
Q Consensus 289 ps~QGKGyGS~LMnhLke~Are~~Gi~~LLT--yADn-~AIgFYkKqGFtke 337 (464)
|++||+|||+.||+++++++++ .++..+.. ..+| .++.||+|+||+..
T Consensus 78 p~~rg~Gig~~ll~~~~~~~~~-~~~~~~~~~~~~~N~~~~~~y~k~GF~~~ 128 (140)
T PRK03624 78 PDFRGRGIGRALVARLEKKLIA-RGCPKINLQVREDNDAVLGFYEALGYEEQ 128 (140)
T ss_pred HHHhCCCHHHHHHHHHHHHHHH-CCCCEEEEEEecCcHHHHHHHHHcCCccc
Confidence 9999999999999999999998 88887643 4444 59999999999874
No 12
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=99.35 E-value=2.3e-11 Score=100.62 Aligned_cols=96 Identities=18% Similarity=0.210 Sum_probs=70.0
Q ss_pred cHHHHHHHhhcCCceEEEEEECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEE-
Q 012402 241 PKEYIVRLVMDRSHKSVMVIRGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLT- 319 (464)
Q Consensus 241 pkEYI~RLVfD~~h~s~VlikdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLT- 319 (464)
..+.+...+.......+++..++++||++.+.... ....|..++|+|++||||+|+.||+++++++.+ .++..+.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~--~~~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~-~~~~~i~~~ 94 (131)
T TIGR01575 18 TEAQFAEELANYHLCYLLARIGGKVVGYAGVQIVL--DEAHILNIAVKPEYQGQGIGRALLRELIDEAKG-RGVNEIFLE 94 (131)
T ss_pred CHHHHHHHhcCCCceEEEEecCCeEEEEEEEEecC--CCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHH-cCCCeEEEE
Confidence 34455444433333334444579999998876533 335788999999999999999999999999997 78877654
Q ss_pred -cc-CccchhhhhhcCCeEeee
Q 012402 320 -YA-DNNAVGYFIKQGFTKEIY 339 (464)
Q Consensus 320 -yA-Dn~AIgFYkKqGFtkeI~ 339 (464)
.. +..++.||+|+||+....
T Consensus 95 ~~~~n~~~~~~y~~~Gf~~~~~ 116 (131)
T TIGR01575 95 VRVSNIAAQALYKKLGFNEIAI 116 (131)
T ss_pred EecccHHHHHHHHHcCCCcccc
Confidence 23 345899999999987533
No 13
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=99.33 E-value=9.7e-12 Score=109.35 Aligned_cols=96 Identities=22% Similarity=0.320 Sum_probs=71.2
Q ss_pred cHHHHHHHhhcCCceEEEEEE---CC----EEEEEEEEEEecCC----ceEEEEEEEeCCCccccCHHHHHHHHHHHHHH
Q 012402 241 PKEYIVRLVMDRSHKSVMVIR---GN----VVVGGITYRPYVSQ----KFGEIAFCAITADEQVKGYGTRLMNHLKQHAR 309 (464)
Q Consensus 241 pkEYI~RLVfD~~h~s~Vlik---dG----kVIGGI~~R~f~~~----~faEIvfIAVsps~QGKGyGS~LMnhLke~Ar 309 (464)
+..++...+.+.....++... ++ +++|++..+..... ...+|..+||+|+|||+|||++||+++++.++
T Consensus 42 ~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~ 121 (177)
T COG0456 42 SREYFEKDLTQAPELLLVAETGGLDGLLDGKVVGFLLVRVVDGRPSADHEGHIYNLAVDPEYRGRGIGRALLDEALERLR 121 (177)
T ss_pred hHHHHHHHHhhCcceeEEEEecccCCCcccceeEEEEEEEecCCccccCccEEEEEEEChHhhcCCHHHHHHHHHHHHHH
Confidence 556666666555544444444 23 59998887643332 15789999999999999999999999999999
Q ss_pred hhCCC-cE--EEEccCc-cchhhhhhcCCeEe
Q 012402 310 DVDGL-TH--FLTYADN-NAVGYFIKQGFTKE 337 (464)
Q Consensus 310 e~~Gi-~~--LLTyADn-~AIgFYkKqGFtke 337 (464)
+ .++ .. +.+..+| .|++||+|+||++.
T Consensus 122 ~-~~~~~~~~L~V~~~N~~Ai~lY~~~GF~~~ 152 (177)
T COG0456 122 E-RGLADKIVLEVRESNEAAIGLYRKLGFEVV 152 (177)
T ss_pred h-cCCCceEEEEEecCChHHHHHHHHcCCEEE
Confidence 7 775 44 3445566 49999999999984
No 14
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.30 E-value=3.1e-11 Score=109.91 Aligned_cols=120 Identities=18% Similarity=0.254 Sum_probs=81.6
Q ss_pred CcEEEEEecCCCchhhHHHHHHHHHHHhhcCCCCcHHHHHHHhhcCCceEEEEE-ECCEEEEEEEEEEecCCceEEEEEE
Q 012402 207 GNLKFVCLSNDGIDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVI-RGNVVVGGITYRPYVSQKFGEIAFC 285 (464)
Q Consensus 207 G~I~f~vv~Nd~~~~~liwL~~LkniFskQLPkMpkEYI~RLVfD~~h~s~Vli-kdGkVIGGI~~R~f~~~~faEIvfI 285 (464)
+.|.|+.++.++.+....++.. +..+.-..+... .... +.....+++. .++++||++++... ...+++|..+
T Consensus 4 ~~i~iR~a~~~D~~~i~~L~~~----~~~~~~~~~~~~-~~~~-~~~~~~~va~~~~~~iiG~~~~~~~-~~~~~~i~~l 76 (169)
T PRK07922 4 GAITVRRARTSDVPAIKRLVDP----YAQGRILLEKNL-VTLY-EAVQEFWVAEHLDGEVVGCGALHVM-WEDLAEIRTV 76 (169)
T ss_pred CCceeecCCHhhHHHHHHHHHH----HhhcCccccchH-HHHH-hhcCcEEEEEecCCcEEEEEEEeec-CCCceEEEEE
Confidence 4577777776655544444332 222210011111 1121 2223456666 67899998877553 3456899999
Q ss_pred EeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcCCeE
Q 012402 286 AITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTK 336 (464)
Q Consensus 286 AVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqGFtk 336 (464)
+|+|++||+|||++||++++++|++ .|+..+.... .++.||+|+||+.
T Consensus 77 ~V~p~~rgkGiG~~Ll~~~~~~a~~-~g~~~l~~~~--~~~~fY~k~GF~~ 124 (169)
T PRK07922 77 AVDPAARGRGVGHAIVERLLDVARE-LGLSRVFVLT--FEVEFFARHGFVE 124 (169)
T ss_pred EECHHHhCCCHHHHHHHHHHHHHHH-cCCCEEEEEe--ccHHHHHHCCCEE
Confidence 9999999999999999999999998 9999876542 3589999999987
No 15
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=99.29 E-value=3.3e-11 Score=130.34 Aligned_cols=106 Identities=22% Similarity=0.323 Sum_probs=85.9
Q ss_pred eEEEEEECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcCC
Q 012402 255 KSVMVIRGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGF 334 (464)
Q Consensus 255 ~s~VlikdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqGF 334 (464)
..+++..+++|||++++... ....++|..++|+|+|||||||+.||+++++++++ .|+..+.+.. .+..||+|+||
T Consensus 504 ~~~Va~~~g~IVG~~~l~~~-~~~~~~I~~i~V~P~~rGkGIGk~Ll~~l~~~ak~-~g~~~i~l~~--~a~~FYek~GF 579 (614)
T PRK12308 504 SFAVAEHHGEVTGCASLYIY-DSGLAEIRSLGVEAGWQVQGQGSALVQYLVEKARQ-MAIKKVFVLT--RVPEFFMKQGF 579 (614)
T ss_pred cEEEEEECCEEEEEEEEEEc-CCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHH-CCCCEEEEee--CcHHHHHHCCC
Confidence 34556678999999887654 33568999999999999999999999999999998 8999876543 46899999999
Q ss_pred eEeeecccccccccccCCCCceeeeeecCCCCCCcCHHHH
Q 012402 335 TKEIYLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTM 374 (464)
Q Consensus 335 tkeI~lpk~iw~GyIKDYEgatLMEC~L~Pki~Y~~l~~m 374 (464)
+.. |+ .+++..++|.|.+||+=.-|+...|
T Consensus 580 ~~~---------~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (614)
T PRK12308 580 SPT---------SK-SLLPEKVLKDCDQCPRQHACDEVAL 609 (614)
T ss_pred EEC---------Cc-ccCChHHHHhhccCCCccCCChHHh
Confidence 873 32 2456888999999999877776655
No 16
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=99.28 E-value=7.9e-11 Score=99.08 Aligned_cols=80 Identities=21% Similarity=0.371 Sum_probs=63.9
Q ss_pred ceEEEEEECCEEEEEEEEEEe----cC--CceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchh
Q 012402 254 HKSVMVIRGNVVVGGITYRPY----VS--QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVG 327 (464)
Q Consensus 254 h~s~VlikdGkVIGGI~~R~f----~~--~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIg 327 (464)
...+++.++++|||.+++.+. .. .....|..++|+|++||||+|++||+++.+++++ .|+..++.++ ....
T Consensus 41 ~~~~~~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v~p~~R~~Gl~~~L~~~~~~~~~~-~g~~~~~l~~--~~~~ 117 (127)
T PF13527_consen 41 GRCVVAEDDGKIVGHVGLIPRRLSVGGKKFKAAYIGDVAVDPEYRGRGLGRQLMRALLERARE-RGVPFIFLFP--SSPP 117 (127)
T ss_dssp TEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHH-TT-SEEEEE---SSHH
T ss_pred CcEEEEEECCEEEEEEEEEEEEEEECCEEEEEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHh-CCCCEEEEec--CChh
Confidence 356777789999998776543 11 1346788999999999999999999999999998 8999888876 4589
Q ss_pred hhhhcCCeE
Q 012402 328 YFIKQGFTK 336 (464)
Q Consensus 328 FYkKqGFtk 336 (464)
||+|+||..
T Consensus 118 ~Y~~~G~~~ 126 (127)
T PF13527_consen 118 FYRRFGFEY 126 (127)
T ss_dssp HHHHTTEEE
T ss_pred hhhcCCCEE
Confidence 999999975
No 17
>PRK10314 putative acyltransferase; Provisional
Probab=99.28 E-value=1.9e-11 Score=109.97 Aligned_cols=84 Identities=10% Similarity=0.026 Sum_probs=67.7
Q ss_pred ceEEEEEECCEEEEEEEEEEecC-CceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhc
Q 012402 254 HKSVMVIRGNVVVGGITYRPYVS-QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQ 332 (464)
Q Consensus 254 h~s~VlikdGkVIGGI~~R~f~~-~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKq 332 (464)
...+++..++++||++.+..... ...++|..++|+|++||+|||++||+++++++++..+...+.+.+...|.+||+|+
T Consensus 48 ~~h~~~~~~~~~vg~~r~~~~~~~~~~~~i~rv~V~~~~rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a~~~a~~fY~k~ 127 (153)
T PRK10314 48 NRHILGWKNDELVAYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGAQAHLQNFYQSF 127 (153)
T ss_pred cEEEEEEECCEEEEEEEEecCCCCCCCEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHHCCCCcEEEehHHHHHHHHHHC
Confidence 34456667899999887765322 23578999999999999999999999999999873466677777766799999999
Q ss_pred CCeEe
Q 012402 333 GFTKE 337 (464)
Q Consensus 333 GFtke 337 (464)
||...
T Consensus 128 GF~~~ 132 (153)
T PRK10314 128 GFIPV 132 (153)
T ss_pred CCEEC
Confidence 99873
No 18
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.27 E-value=2.8e-11 Score=125.24 Aligned_cols=91 Identities=24% Similarity=0.461 Sum_probs=73.6
Q ss_pred EEEEEECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcCCe
Q 012402 256 SVMVIRGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFT 335 (464)
Q Consensus 256 s~VlikdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqGFt 335 (464)
.+++..++++||++.+.++.....+||..++|+|+|||+|+|++||++++++|++ +|+..+++.. .++..||+|+||+
T Consensus 324 ~~V~~~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~-~G~~~l~v~~-~~a~~fY~k~GF~ 401 (429)
T TIGR01890 324 FSIIEHDGNIIGCAALYPYAEEDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQ-MGISRLFVLT-TRTGHWFRERGFQ 401 (429)
T ss_pred EEEEEECCEEEEEEEEEecCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHH-cCCCEEEEee-cchHHHHHHCCCE
Confidence 3455568999999988877666678999999999999999999999999999998 8998765543 3478999999998
Q ss_pred Ee--eeccccccccc
Q 012402 336 KE--IYLEKDRWQGY 348 (464)
Q Consensus 336 ke--I~lpk~iw~Gy 348 (464)
.. ..+|..+|..|
T Consensus 402 ~~g~~~l~~~~~~~~ 416 (429)
T TIGR01890 402 TASVDELPEARRKLY 416 (429)
T ss_pred ECChhhCCHHHHHHh
Confidence 74 34566555544
No 19
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=99.26 E-value=6.2e-11 Score=102.71 Aligned_cols=100 Identities=16% Similarity=0.232 Sum_probs=74.5
Q ss_pred EEEEEECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEE--ccCc-cchhhhhhc
Q 012402 256 SVMVIRGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLT--YADN-NAVGYFIKQ 332 (464)
Q Consensus 256 s~VlikdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLT--yADn-~AIgFYkKq 332 (464)
.+++..++++||++++..... .+++..++|+|++||||||+.||.++++.+++ .++..+.. ...| .|+.||+|+
T Consensus 42 ~~~~~~~~~~vG~~~~~~~~~--~~~~~~i~v~~~~rg~G~g~~ll~~~~~~~~~-~~~~~~~~~~~~~N~~a~~~y~k~ 118 (146)
T PRK09491 42 NLKLTVNGQMAAFAITQVVLD--EATLFNIAVDPDYQRQGLGRALLEHLIDELEK-RGVATLWLEVRASNAAAIALYESL 118 (146)
T ss_pred EEEEEECCeEEEEEEEEeecC--ceEEEEEEECHHHccCCHHHHHHHHHHHHHHH-CCCcEEEEEEccCCHHHHHHHHHc
Confidence 344557899999988765433 46688899999999999999999999999987 88887543 3334 599999999
Q ss_pred CCeEeeecccccccccccCCCCceeeee
Q 012402 333 GFTKEIYLEKDRWQGYIKDYDGGILMEC 360 (464)
Q Consensus 333 GFtkeI~lpk~iw~GyIKDYEgatLMEC 360 (464)
||+....+++ .|.. ...|.+..+|+.
T Consensus 119 Gf~~~~~~~~-~~~~-~~~~~d~~~~~~ 144 (146)
T PRK09491 119 GFNEVTIRRN-YYPT-ADGREDAIIMAL 144 (146)
T ss_pred CCEEeeeeec-cccC-CCCceeEEEEec
Confidence 9997544422 2211 123778888874
No 20
>PHA00673 acetyltransferase domain containing protein
Probab=99.24 E-value=1.1e-10 Score=107.79 Aligned_cols=93 Identities=19% Similarity=0.192 Sum_probs=77.3
Q ss_pred HHHHHhhcCCceEEEEEECCEEEEEEEEEEec-----CCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEE
Q 012402 244 YIVRLVMDRSHKSVMVIRGNVVVGGITYRPYV-----SQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFL 318 (464)
Q Consensus 244 YI~RLVfD~~h~s~VlikdGkVIGGI~~R~f~-----~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LL 318 (464)
++.++.-|++..-+++..+|+|||++.+...+ ...++.|.+++|++++||+|||++||++++++|++ .||..+.
T Consensus 45 af~ai~~dp~~~llVa~~~g~vVG~~~l~~~p~l~~~~~~~~~Ie~l~V~~~~RGqGIG~~Ll~~A~~~Ar~-~Gc~~ly 123 (154)
T PHA00673 45 AYAGMEAAGVAHFLGVFRGEELVGFACLLVTPVPHFKGQLIGTTESIFVAAAHRPGGAGMALLRATEALARD-LGATGLY 123 (154)
T ss_pred HHHHHHhCCCcEEEEEEECCEEEEEEEEEEecCCccCCccEEEEEEEEEChhccCCCHHHHHHHHHHHHHHH-CCCCEEE
Confidence 35667778998888888899999976654433 23556899999999999999999999999999998 9999887
Q ss_pred Ecc--CccchhhhhhcCCeEe
Q 012402 319 TYA--DNNAVGYFIKQGFTKE 337 (464)
Q Consensus 319 TyA--Dn~AIgFYkKqGFtke 337 (464)
+.+ ..+-+.||.++|+++.
T Consensus 124 is~~p~~~tv~fy~~~g~~~~ 144 (154)
T PHA00673 124 VSGPTEGRLVQLLPAAGYRET 144 (154)
T ss_pred EecCCCccchHHHHhCCchhh
Confidence 644 4468999999999874
No 21
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=99.24 E-value=1.7e-10 Score=99.97 Aligned_cols=98 Identities=20% Similarity=0.424 Sum_probs=73.0
Q ss_pred HHHHHHhhcCCceEEEEEE-CCEEEEEEEEEEec-CCceEEEEEEEeCCCccccCHHHHHHHHHHHHH-HhhCCCcEEE-
Q 012402 243 EYIVRLVMDRSHKSVMVIR-GNVVVGGITYRPYV-SQKFGEIAFCAITADEQVKGYGTRLMNHLKQHA-RDVDGLTHFL- 318 (464)
Q Consensus 243 EYI~RLVfD~~h~s~Vlik-dGkVIGGI~~R~f~-~~~faEIvfIAVsps~QGKGyGS~LMnhLke~A-re~~Gi~~LL- 318 (464)
.+|..++.++....+++.. +|++||.+.++.+. ....+++. +.|.+++|++|+|+.|+++++++| ++ .|+..+.
T Consensus 39 ~~~~~~~~~~~~~~~~v~~~~g~iiG~~~~~~~~~~~~~~~~~-~~v~~~~~~~gig~~l~~~l~~~af~~-~~~~~i~~ 116 (155)
T PF13420_consen 39 RWIESIIDSSKQRLFLVAEEDGKIIGYVSLRDIDPYNHTAELS-IYVSPDYRGKGIGRKLLDELIEYAFKE-LGIHKIYL 116 (155)
T ss_dssp HHHHHHHHHHTTEEEEEEECTTEEEEEEEEEESSSGTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHH-HH-TT-CEEEE
T ss_pred HHHHHhcccCCCcEEEEEEcCCcEEEEEEEEeeeccCCEEEEe-eEEChhHCCCcHHHHHHHHHHHHhhhc-cCeEEEEE
Confidence 3444443344556677776 89999998887643 34556665 666799999999999999999999 76 9999765
Q ss_pred -EccCc-cchhhhhhcCCeEeeeccc
Q 012402 319 -TYADN-NAVGYFIKQGFTKEIYLEK 342 (464)
Q Consensus 319 -TyADn-~AIgFYkKqGFtkeI~lpk 342 (464)
+.++| .|+.||+|+||+.+..++.
T Consensus 117 ~v~~~N~~~i~~~~~~GF~~~g~~~~ 142 (155)
T PF13420_consen 117 EVFSSNEKAINFYKKLGFEEEGELKD 142 (155)
T ss_dssp EEETT-HHHHHHHHHTTEEEEEEEEE
T ss_pred EEecCCHHHHHHHHhCCCEEEEEEec
Confidence 45555 4999999999999766655
No 22
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=99.22 E-value=8.9e-11 Score=107.76 Aligned_cols=81 Identities=22% Similarity=0.300 Sum_probs=66.1
Q ss_pred eEEEEEE-CCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEE--ccCc-cchhhhh
Q 012402 255 KSVMVIR-GNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLT--YADN-NAVGYFI 330 (464)
Q Consensus 255 ~s~Vlik-dGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLT--yADn-~AIgFYk 330 (464)
..+++.. +|++||+|.+..+.. ...+|..++|.|++||||||+.||+++++++++ .|+..+.+ ..+| .|+.||+
T Consensus 99 ~~~i~~~~~g~iiG~i~l~~~~~-~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~-~g~~~I~l~v~~~N~~A~~~Y~ 176 (191)
T TIGR02382 99 QCLILRDASGDPRGYVTLRELND-TDARIGLLAVFPGAQSRGIGAELMQTALNWCYA-RGLTRLRVATQMGNTAALRLYI 176 (191)
T ss_pred eEEEEEccCCeEEEEEEEEecCC-CceEEEEEEECHHHcCCCHHHHHHHHHHHHHHH-cCCCEEEEEeCCCCHHHHHHHH
Confidence 3444434 689999988876543 347899999999999999999999999999997 89997654 4556 4999999
Q ss_pred hcCCeEe
Q 012402 331 KQGFTKE 337 (464)
Q Consensus 331 KqGFtke 337 (464)
|+||+.+
T Consensus 177 klGF~~~ 183 (191)
T TIGR02382 177 RSGANIE 183 (191)
T ss_pred HcCCccc
Confidence 9999875
No 23
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=99.21 E-value=2.1e-10 Score=99.62 Aligned_cols=75 Identities=17% Similarity=0.348 Sum_probs=56.9
Q ss_pred CCEEEEEEEEEEe---cC--CceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcCCeE
Q 012402 262 GNVVVGGITYRPY---VS--QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTK 336 (464)
Q Consensus 262 dGkVIGGI~~R~f---~~--~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqGFtk 336 (464)
+++|||.+.+... .. ..+..|..++|+|+|||||||+.||++++++|++ .|+..+..........||+|+||..
T Consensus 63 ~~~ivG~~~~~~~~~~~~~~~~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~-~g~~~i~l~~~~~N~~~y~k~GF~~ 141 (150)
T PLN02706 63 SGRIIATGSVFVERKFIRNCGKVGHIEDVVVDSAARGKGLGKKIIEALTEHARS-AGCYKVILDCSEENKAFYEKCGYVR 141 (150)
T ss_pred CCcEEEEEEEEEEeecccCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHH-cCCCEEEEEeccccHHHHHHCcCEE
Confidence 5899997665321 11 2235677799999999999999999999999998 8999875433222257999999997
Q ss_pred e
Q 012402 337 E 337 (464)
Q Consensus 337 e 337 (464)
+
T Consensus 142 ~ 142 (150)
T PLN02706 142 K 142 (150)
T ss_pred e
Confidence 4
No 24
>PRK10514 putative acetyltransferase; Provisional
Probab=99.19 E-value=2.7e-10 Score=97.89 Aligned_cols=74 Identities=23% Similarity=0.267 Sum_probs=55.7
Q ss_pred EEEEE-ECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCc-cchhhhhhcC
Q 012402 256 SVMVI-RGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADN-NAVGYFIKQG 333 (464)
Q Consensus 256 s~Vli-kdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn-~AIgFYkKqG 333 (464)
.++++ .++++||++++.. .++..++|+|++||||||+.||+++++.+.. +. +.+...| .|++||+|+|
T Consensus 51 ~~~~~~~~~~~iG~~~~~~------~~~~~~~v~p~~rgkGig~~Ll~~~~~~~~~---i~-~~v~~~N~~a~~~yek~G 120 (145)
T PRK10514 51 LWVAVDERDQPVGFMLLSG------GHMEALFVDPDVRGCGVGRMLVEHALSLHPE---LT-TDVNEQNEQAVGFYKKMG 120 (145)
T ss_pred eEEEEecCCcEEEEEEEec------CcEeEEEECHHhccCCHHHHHHHHHHHhccc---cE-EEeecCCHHHHHHHHHCC
Confidence 34444 4789999888642 2455799999999999999999999987643 32 3344444 5999999999
Q ss_pred CeEeee
Q 012402 334 FTKEIY 339 (464)
Q Consensus 334 FtkeI~ 339 (464)
|+....
T Consensus 121 f~~~~~ 126 (145)
T PRK10514 121 FKVTGR 126 (145)
T ss_pred CEEecc
Confidence 998533
No 25
>PRK09831 putative acyltransferase; Provisional
Probab=99.18 E-value=2.7e-10 Score=99.76 Aligned_cols=75 Identities=17% Similarity=0.184 Sum_probs=58.7
Q ss_pred eEEEEEECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcCC
Q 012402 255 KSVMVIRGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGF 334 (464)
Q Consensus 255 ~s~VlikdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqGF 334 (464)
..+++..+|++||++++.. ..|..++|+|++||||||++||+++++.+++ +.+.++..|++||+|+||
T Consensus 54 ~~~v~~~~~~iiG~~~~~~------~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~------l~v~~~~~a~~~Y~k~Gf 121 (147)
T PRK09831 54 QVRVAVINAQPVGFITCIE------HYIDMLFVDPEYTRRGVASALLKPLIKSESE------LTVDASITAKPFFERYGF 121 (147)
T ss_pred ceEEEEECCEEEEEEEehh------ceeeeEEECHHHcCCCHHHHHHHHHHHHhhh------eEeecchhhHHHHHHCCC
Confidence 4556667899999877632 2466799999999999999999999998874 223445679999999999
Q ss_pred eEeeecc
Q 012402 335 TKEIYLE 341 (464)
Q Consensus 335 tkeI~lp 341 (464)
......+
T Consensus 122 ~~~g~~~ 128 (147)
T PRK09831 122 QTVKQQR 128 (147)
T ss_pred EEeeccc
Confidence 9865543
No 26
>PLN02825 amino-acid N-acetyltransferase
Probab=99.17 E-value=1.8e-10 Score=123.32 Aligned_cols=94 Identities=22% Similarity=0.471 Sum_probs=75.3
Q ss_pred CCCCcHHHHHHHhhcCCceEEEEEECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcE
Q 012402 237 LPNMPKEYIVRLVMDRSHKSVMVIRGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTH 316 (464)
Q Consensus 237 LPkMpkEYI~RLVfD~~h~s~VlikdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~ 316 (464)
+....++.+.+.+ . ..+++..+|+|||++.+.++.....+||..+||+|+|||+|+|++||++++++|++ +|+..
T Consensus 394 lv~rs~e~le~ei---~-~f~V~e~Dg~IVG~aal~~~~~~~~aEI~~laV~P~yRGkGiG~~LL~~le~~Ar~-~G~~~ 468 (515)
T PLN02825 394 LVRRTDEELLRAL---D-SFVVVEREGSIIACAALFPFFEEKCGEVAAIAVSPECRGQGQGDKLLDYIEKKAAS-LGLEK 468 (515)
T ss_pred CcCCCHHHHHhcC---C-cEEEEEECCEEEEEEEEEeecCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHH-CCCCE
Confidence 3444566665432 2 34556678999998888777666778999999999999999999999999999998 99998
Q ss_pred EEEccCccchhhhhhcCCeE
Q 012402 317 FLTYADNNAVGYFIKQGFTK 336 (464)
Q Consensus 317 LLTyADn~AIgFYkKqGFtk 336 (464)
+.... ..+..||+|+||..
T Consensus 469 L~Llt-t~a~~fY~k~GF~~ 487 (515)
T PLN02825 469 LFLLT-TRTADWFVRRGFSE 487 (515)
T ss_pred EEEEe-CcHHHHHHHCCCEE
Confidence 75433 45899999999976
No 27
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=99.14 E-value=2.6e-09 Score=95.76 Aligned_cols=151 Identities=19% Similarity=0.265 Sum_probs=95.6
Q ss_pred CcEEEEEecCCCchhhHHHHHHHHHHHhhcC--CC--Cc----HHHHHHHhh--cCCc-eEEEEEECCEEEEEEEEEEec
Q 012402 207 GNLKFVCLSNDGIDEHMVWLIGLKNIFARQL--PN--MP----KEYIVRLVM--DRSH-KSVMVIRGNVVVGGITYRPYV 275 (464)
Q Consensus 207 G~I~f~vv~Nd~~~~~liwL~~LkniFskQL--Pk--Mp----kEYI~RLVf--D~~h-~s~VlikdGkVIGGI~~R~f~ 275 (464)
..|.++.+..++......|+..-...+...+ |. .. +++|.+... +... ..+++..+|++||.+.+..+.
T Consensus 9 ~rl~Lr~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~iG~~~l~~~~ 88 (179)
T PRK10151 9 ESLELHAVDESHVTPLHQLVCKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVLSFNRIE 88 (179)
T ss_pred CcEEEEeCCHHHHHHHHHHHHHhHHHHHhcCCCcCccCCHHHHHHHHHHHHHHHhcCCcEEEEEEECCEEEEEEEEEeec
Confidence 4577888776655544444432222221111 11 11 566655432 2221 246666789999998876543
Q ss_pred -CCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEE--EccCcc-chhhhhhcCCeEeeecccccccccccC
Q 012402 276 -SQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFL--TYADNN-AVGYFIKQGFTKEIYLEKDRWQGYIKD 351 (464)
Q Consensus 276 -~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LL--TyADn~-AIgFYkKqGFtkeI~lpk~iw~GyIKD 351 (464)
..+.+||- ++|.|++||||||+.++..+.+++.+..++..+. ++.+|. +..+|+|+||+.+..+.+..+.+ -.
T Consensus 89 ~~~~~~~ig-~~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v~ek~Gf~~~g~~~~~~~~~--g~ 165 (179)
T PRK10151 89 PLNKTAYIG-YWLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASNQVALRNGFTLEGCLKQAEYLN--GA 165 (179)
T ss_pred cCCCceEEE-EEEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHHHHHHHCCCEEEeEeccceEEC--CE
Confidence 23457774 5799999999999999999999998646787654 456664 89999999999976664433221 23
Q ss_pred CCCceeeee
Q 012402 352 YDGGILMEC 360 (464)
Q Consensus 352 YEgatLMEC 360 (464)
|.+..+|+-
T Consensus 166 ~~D~~~~~~ 174 (179)
T PRK10151 166 YDDVNLYAR 174 (179)
T ss_pred EEEEEEEEE
Confidence 455666664
No 28
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=99.11 E-value=1.1e-09 Score=95.62 Aligned_cols=130 Identities=15% Similarity=0.146 Sum_probs=85.4
Q ss_pred EEEec-CCCchhhHHHHHHH--HHHHhhcCCCCcHHHHHHHh-hcCCceEEEEEECCEEEEEEEEEEec-----CCceEE
Q 012402 211 FVCLS-NDGIDEHMVWLIGL--KNIFARQLPNMPKEYIVRLV-MDRSHKSVMVIRGNVVVGGITYRPYV-----SQKFGE 281 (464)
Q Consensus 211 f~vv~-Nd~~~~~liwL~~L--kniFskQLPkMpkEYI~RLV-fD~~h~s~VlikdGkVIGGI~~R~f~-----~~~faE 281 (464)
||.++ .++-+..+.|+..- ...+...-+.-..+++.+.+ .++.+..+++..+|+++|++++.... ......
T Consensus 1 ~R~a~~~~Dl~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~dg~~~g~~~~~~~~~~~~~~~~~~~ 80 (152)
T PF13523_consen 1 LRPATTPDDLPLILQWLNQPHVREFWDQDPSQEWVEEYPEQLEADPGHHPYVAEDDGEPIGYFEIYWPDEDYDADDGDRG 80 (152)
T ss_dssp EEE---GGGHHHHHHHHTSHHHHCCH-CCCTHHHHHHHHHHHCHTTTEEEEEEEETTEEEEEEEEEEGGGSS---TTEEE
T ss_pred CeeCccHHHHHHHHHHHHhHHHHHHccCCCCHHHHHHHHhhhcccCCceEEEEEECCEEEEEEEEecccccccCCCCEEE
Confidence 45566 55666677777543 22222222111234454444 36777788888899999988764311 344567
Q ss_pred EEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEE--ccCc-cchhhhhhcCCeEeeec
Q 012402 282 IAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLT--YADN-NAVGYFIKQGFTKEIYL 340 (464)
Q Consensus 282 IvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLT--yADn-~AIgFYkKqGFtkeI~l 340 (464)
+.-++|++++||||+|+.+|..+++++.+..++..+++ ..+| .|+.+|+|.||++..++
T Consensus 81 ~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~~~k~GF~~~g~~ 142 (152)
T PF13523_consen 81 IHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAIRLYEKAGFRKVGEF 142 (152)
T ss_dssp EEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHHHHHHHTT-EEEEEE
T ss_pred EeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHHHHHHHcCCEEeeEE
Confidence 88899999999999999999999999997347887764 4556 49999999999885433
No 29
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.11 E-value=3.4e-10 Score=117.35 Aligned_cols=80 Identities=26% Similarity=0.544 Sum_probs=67.6
Q ss_pred EEEEEECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcCCe
Q 012402 256 SVMVIRGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFT 335 (464)
Q Consensus 256 s~VlikdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqGFt 335 (464)
.+++..++++||++.+..+.....++|..++|+|+|||||+|++||++++++|++ .|+..+.... ..|+.||+|+||+
T Consensus 336 ~~va~~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~-~g~~~l~l~~-~~a~~fY~k~GF~ 413 (441)
T PRK05279 336 FTVIERDGLIIGCAALYPFPEEKMGEMACLAVHPDYRGSGRGERLLKRIEQRARQ-LGLKRLFVLT-TRTAHWFLERGFV 413 (441)
T ss_pred EEEEEECCEEEEEEEEEEcCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHH-cCCCEEEEec-chHHHHHHHCcCE
Confidence 4566678999998887766555678999999999999999999999999999998 8998775433 4689999999998
Q ss_pred Ee
Q 012402 336 KE 337 (464)
Q Consensus 336 ke 337 (464)
+.
T Consensus 414 ~~ 415 (441)
T PRK05279 414 PV 415 (441)
T ss_pred EC
Confidence 74
No 30
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=99.11 E-value=8.5e-10 Score=101.16 Aligned_cols=81 Identities=23% Similarity=0.344 Sum_probs=65.4
Q ss_pred eEEEEEE-CCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEE--ccCc-cchhhhh
Q 012402 255 KSVMVIR-GNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLT--YADN-NAVGYFI 330 (464)
Q Consensus 255 ~s~Vlik-dGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLT--yADn-~AIgFYk 330 (464)
..+++.+ +|++||++.+..... ...+|.+++|.|++||||||+.||+++++++++ .|++.+.. ..+| .|+.||+
T Consensus 102 ~~~v~~~~~g~~vG~~~l~~~~~-~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~-~g~~~i~l~v~~~N~~a~~~ye 179 (194)
T PRK10975 102 QCLLLRDASGQIQGFVTLRELND-TDARIGLLAVFPGAQGRGIGARLMQAALNWCQA-RGLTRLRVATQMGNLAALRLYI 179 (194)
T ss_pred cEEEEEcCCCCEEEEEEEEecCC-CceEEEEEEEChhhcCCCHHHHHHHHHHHHHHH-cCCCEEEEEeCCCcHHHHHHHH
Confidence 3444443 578999988865433 347898999999999999999999999999998 89997754 4455 5899999
Q ss_pred hcCCeEe
Q 012402 331 KQGFTKE 337 (464)
Q Consensus 331 KqGFtke 337 (464)
|+||+.+
T Consensus 180 k~Gf~~~ 186 (194)
T PRK10975 180 RSGANIE 186 (194)
T ss_pred HCCCeEe
Confidence 9999985
No 31
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=99.09 E-value=1.2e-09 Score=98.56 Aligned_cols=111 Identities=21% Similarity=0.174 Sum_probs=78.7
Q ss_pred HHHhhcCCceEEEEEECCEEEEEEEEEEecC-CceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEE--ccC
Q 012402 246 VRLVMDRSHKSVMVIRGNVVVGGITYRPYVS-QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLT--YAD 322 (464)
Q Consensus 246 ~RLVfD~~h~s~VlikdGkVIGGI~~R~f~~-~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLT--yAD 322 (464)
.+.+.++....|++..+|++||++.+..... ....++ .++|+|++||+|||+.|+..+++++.+..++..+.. ..+
T Consensus 49 ~~~~~~~~~~~~~i~~~g~~iG~~~~~~~~~~~~~~~~-~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~ 127 (186)
T PRK15130 49 DKHIHDQSERRFVVECDGEKAGLVELVEINHVHRRAEF-QIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKE 127 (186)
T ss_pred HHhhhcccCcEEEEEECCEEEEEEEEEeecCCCCeEEE-EEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccC
Confidence 3444344445677778899999987755432 234566 589999999999999999999999986578887654 345
Q ss_pred c-cchhhhhhcCCeEeeecccccccccccCCCCceeee
Q 012402 323 N-NAVGYFIKQGFTKEIYLEKDRWQGYIKDYDGGILME 359 (464)
Q Consensus 323 n-~AIgFYkKqGFtkeI~lpk~iw~GyIKDYEgatLME 359 (464)
| .|++||+|+||+....+...... -..|.+..+|.
T Consensus 128 N~~s~~~yek~GF~~~~~~~~~~~~--~g~~~d~~~~~ 163 (186)
T PRK15130 128 NEKAIHIYRKLGFEVEGELIHEFFI--NGEYRNTIRMC 163 (186)
T ss_pred CHHHHHHHHHCCCEEEEEEeheEEE--CCEEEEEEEEE
Confidence 5 59999999999987555432211 12355666666
No 32
>KOG3139 consensus N-acetyltransferase [General function prediction only]
Probab=99.09 E-value=1.8e-09 Score=100.71 Aligned_cols=124 Identities=17% Similarity=0.252 Sum_probs=89.6
Q ss_pred HHHHHHHHHHhhcCCCCcHHHHHHHhhcCCc-eEEEEEECCE-EEEEEEEEEecCC--ceEEEEEEEeCCCccccCHHHH
Q 012402 224 VWLIGLKNIFARQLPNMPKEYIVRLVMDRSH-KSVMVIRGNV-VVGGITYRPYVSQ--KFGEIAFCAITADEQVKGYGTR 299 (464)
Q Consensus 224 iwL~~LkniFskQLPkMpkEYI~RLVfD~~h-~s~VlikdGk-VIGGI~~R~f~~~--~faEIvfIAVsps~QGKGyGS~ 299 (464)
..|.....+..+.|+..=..|..|+.-.... .+|+..+++. -||.|....-... .-.+|.-+||++++||+|||+.
T Consensus 25 ~~l~~im~Li~k~lsepyS~~tyrYf~~~wp~~~~~a~d~~~~~VGai~ck~~~~r~~~rgyi~mLaV~~e~Rg~GIg~a 104 (165)
T KOG3139|consen 25 EYLADIMRLIDKDLSEPYSIYTYRYFVPNWPCFCFLALDEKGDTVGAIVCKLDTHRNTLRGYIAMLAVDSEYRGQGIGKA 104 (165)
T ss_pred HHHHHHHHHHhhhcCchhHHHHHHhcccCCceEEEEEEcCCCceEEEEEEeccccCCcceEEEEEEEechhhccccHHHH
Confidence 3344556667777887667777777643332 3444444433 4998777653332 2489999999999999999999
Q ss_pred HHHHHHHHHHhhCCCcEEEEcc---CccchhhhhhcCCeEeeeccccccccc
Q 012402 300 LMNHLKQHARDVDGLTHFLTYA---DNNAVGYFIKQGFTKEIYLEKDRWQGY 348 (464)
Q Consensus 300 LMnhLke~Are~~Gi~~LLTyA---Dn~AIgFYkKqGFtkeI~lpk~iw~Gy 348 (464)
|...+++.++. +|+..++..+ +..|.++|++.||.....+-+-.|+|.
T Consensus 105 Lvr~aId~m~~-~g~~eVvLeTe~~n~~A~~LY~sLGF~r~~r~~~YYlng~ 155 (165)
T KOG3139|consen 105 LVRKAIDAMRS-RGYSEVVLETEVTNLSALRLYESLGFKRDKRLFRYYLNGM 155 (165)
T ss_pred HHHHHHHHHHH-CCCcEEEEeccccchHHHHHHHhcCceEecceeEEEECCc
Confidence 99999999998 9999876532 235999999999998755555555544
No 33
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=99.09 E-value=6.1e-10 Score=99.87 Aligned_cols=81 Identities=19% Similarity=0.182 Sum_probs=63.2
Q ss_pred EEEEEE-CCEEEEEEEEEEec-CCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEE--ccCc-cchhhhh
Q 012402 256 SVMVIR-GNVVVGGITYRPYV-SQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLT--YADN-NAVGYFI 330 (464)
Q Consensus 256 s~Vlik-dGkVIGGI~~R~f~-~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLT--yADn-~AIgFYk 330 (464)
.+++.. ++++||++++.... ....+.|..++|+|++||||||+.||+++++++++ .++..+.+ ..+| .|+.||+
T Consensus 41 ~~v~~~~~~~ivG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~L~~~l~~~a~~-~~~~~i~~~v~~~N~~a~~ly~ 119 (157)
T TIGR02406 41 SIVAESEGGEIVGFVSGYLRPDRPDVLFVWQVAVDPRARGKGLARRLLEALLERVAC-ERVRHLETTITPDNQASRALFK 119 (157)
T ss_pred EEEEEcCCCeEEEEEEEEecCCCCCeEEEEEEEEChHhccCcHHHHHHHHHHHHHHh-CCCCEEEEEEcCCCHHHHHHHH
Confidence 444443 57999987654332 23457788999999999999999999999999997 78887653 4555 4899999
Q ss_pred hcCCeEe
Q 012402 331 KQGFTKE 337 (464)
Q Consensus 331 KqGFtke 337 (464)
|+||+..
T Consensus 120 k~G~~~~ 126 (157)
T TIGR02406 120 ALARRRG 126 (157)
T ss_pred HhCcccC
Confidence 9999774
No 34
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=99.07 E-value=5.3e-10 Score=112.18 Aligned_cols=74 Identities=15% Similarity=0.301 Sum_probs=62.5
Q ss_pred EEEE-ECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcCCe
Q 012402 257 VMVI-RGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFT 335 (464)
Q Consensus 257 ~Vli-kdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqGFt 335 (464)
+.+. .+++|||++.+. . .+|..+||+|+|||+|+|++||+++++++++ .|+.++..++++.+.+||+|+||+
T Consensus 8 ~~v~~~~~~iVG~~~l~--~----~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~-~g~~~i~L~t~~~~~~fYek~GF~ 80 (297)
T cd02169 8 VGIFDDAGELIATGSIA--G----NVLKCVAVCPKYQGEGLALKIVSELINKAYE-EGIFHLFLFTKPKNAKFFRGLGFK 80 (297)
T ss_pred EEEEEECCEEEEEEEec--c----CEEEEEEECHHHcCCCHHHHHHHHHHHHHHH-CCCCEEEEEEcccHHHHHHHCCCE
Confidence 4443 469999965542 1 2689999999999999999999999999998 899998888777889999999998
Q ss_pred Ee
Q 012402 336 KE 337 (464)
Q Consensus 336 ke 337 (464)
..
T Consensus 81 ~~ 82 (297)
T cd02169 81 EL 82 (297)
T ss_pred Ee
Confidence 73
No 35
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=99.04 E-value=2.7e-09 Score=92.29 Aligned_cols=97 Identities=20% Similarity=0.167 Sum_probs=71.8
Q ss_pred HHHHHHHhhcCCceEEEEEECCEEEEEEEEEEecC-CceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEE-
Q 012402 242 KEYIVRLVMDRSHKSVMVIRGNVVVGGITYRPYVS-QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLT- 319 (464)
Q Consensus 242 kEYI~RLVfD~~h~s~VlikdGkVIGGI~~R~f~~-~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLT- 319 (464)
..|+..+..++.+..+++..+|++||++++..+.. ....++- +.+.|.+| ||||+.+|..+.+++.+..++..+..
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~~~~~~~~~~g-~~~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~ 116 (156)
T TIGR03585 39 LHFIEALKQDPNRRYWIVCQESRPIGVISFTDINLVHKSAFWG-IYANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLE 116 (156)
T ss_pred HHHHHHhhcCCCceEEEEEECCEEEEEEEEEecChhhCeEEEE-EEeChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEE
Confidence 45555555555555667777899999888765432 3445664 44899999 99999999999999986468887653
Q ss_pred -ccCc-cchhhhhhcCCeEeeec
Q 012402 320 -YADN-NAVGYFIKQGFTKEIYL 340 (464)
Q Consensus 320 -yADn-~AIgFYkKqGFtkeI~l 340 (464)
..+| .|++||+|+||+....+
T Consensus 117 v~~~N~~s~~~y~k~Gf~~~g~~ 139 (156)
T TIGR03585 117 VLEFNNKALKLYEKFGFEREGVF 139 (156)
T ss_pred EeccCHHHHHHHHHcCCeEeeee
Confidence 4445 48999999999986444
No 36
>PRK13688 hypothetical protein; Provisional
Probab=99.04 E-value=1.2e-09 Score=100.00 Aligned_cols=80 Identities=23% Similarity=0.290 Sum_probs=59.6
Q ss_pred CCceEEEEEECCEEEEEEEEEEe---------cCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccC
Q 012402 252 RSHKSVMVIRGNVVVGGITYRPY---------VSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYAD 322 (464)
Q Consensus 252 ~~h~s~VlikdGkVIGGI~~R~f---------~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyAD 322 (464)
+....+++..++++||++.+... .....++|..++|+|++||||||++||+++++ .++. +.+.+.
T Consensus 43 ~~~~~~~~~~~~~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~l~V~p~~rgkGiG~~Ll~~a~~-----~~~~-~~~~~~ 116 (156)
T PRK13688 43 SESPFYGIYYGDSLVARMSLYKKGGVEEPYFEDTQDYLELWKLEVLPKYQNRGYGEMLVDFAKS-----FQLP-IKTIAR 116 (156)
T ss_pred CCCCEEEEEECCEEEEEEEEEecCCcccccccCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHH-----hCCe-EEEEec
Confidence 34455667778999997765321 12356899999999999999999999986543 3443 344566
Q ss_pred ccchhhhhhcCCeEe
Q 012402 323 NNAVGYFIKQGFTKE 337 (464)
Q Consensus 323 n~AIgFYkKqGFtke 337 (464)
+.|..||+|+||+..
T Consensus 117 ~~a~~FY~k~GF~~~ 131 (156)
T PRK13688 117 NKSKDFWLKLGFTPV 131 (156)
T ss_pred cchHHHHHhCCCEEe
Confidence 789999999999874
No 37
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.02 E-value=4.9e-09 Score=104.62 Aligned_cols=124 Identities=16% Similarity=0.182 Sum_probs=87.9
Q ss_pred CcEEEEEecCCCchhhHHHHHHHHHHHhhcCCCCcHHHHHHHhhcCCceEEEEE-E----CCEEEEEEEEEEecCCceEE
Q 012402 207 GNLKFVCLSNDGIDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVI-R----GNVVVGGITYRPYVSQKFGE 281 (464)
Q Consensus 207 G~I~f~vv~Nd~~~~~liwL~~LkniFskQLPkMpkEYI~RLVfD~~h~s~Vli-k----dGkVIGGI~~R~f~~~~faE 281 (464)
-.+.|+..+..+.+....+.. --|.|...-...+.+.|.+++-++ ..+++. . ++.+||++.++. ....++
T Consensus 185 m~~~Ir~a~~~Dl~ri~~L~~-~tnqfn~~~~~~s~~~i~~~l~~~--~~~~~~~~d~~gd~givG~~~~~~--~~~~~~ 259 (320)
T TIGR01686 185 LSLNISKNDEQNVQRVEELLG-RTNQFNATYTRLNQEDVAQHMQKE--EIVTVSMSDRFGDSGIIGIFVFEK--KEGNLF 259 (320)
T ss_pred CEEEEEECChhhhHHHHHHHH-hHHhhhccCccCCHHHHHHHhcCC--CEEEEEEEecCCCCceEEEEEEEe--cCCcEE
Confidence 346777776655444443333 244454333456778888777555 233332 2 467999888764 344578
Q ss_pred EEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEE-c---cCc-cchhhhhhcCCeE
Q 012402 282 IAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLT-Y---ADN-NAVGYFIKQGFTK 336 (464)
Q Consensus 282 IvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLT-y---ADn-~AIgFYkKqGFtk 336 (464)
|..++|++.+||+|+|+.||+++++.|++ .|+..+.. + ..| .|+.||+|+||+.
T Consensus 260 I~~l~vs~r~~grGig~~Ll~~l~~~a~~-~G~~~i~l~v~~~~~N~~A~~fY~~~GF~~ 318 (320)
T TIGR01686 260 IDDLCMSCRALGRGVETRMLRWLFEQALD-LGNHNARLYYRRTERNMPFLSFYEQIGFED 318 (320)
T ss_pred EEEEEEcHhHhcCcHHHHHHHHHHHHHHH-cCCCeEEEEEeeCCCchHHHHHHHHcCCcc
Confidence 99999999999999999999999999998 89996543 3 245 5999999999985
No 38
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=99.01 E-value=7.8e-09 Score=94.02 Aligned_cols=88 Identities=13% Similarity=0.114 Sum_probs=65.9
Q ss_pred CCceEEEEEE--CCEEEEEEEEEEecC--CceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEE--EccCc-c
Q 012402 252 RSHKSVMVIR--GNVVVGGITYRPYVS--QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFL--TYADN-N 324 (464)
Q Consensus 252 ~~h~s~Vlik--dGkVIGGI~~R~f~~--~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LL--TyADn-~ 324 (464)
.....+++.. ++++||.|.+..+.. ...+|| .++|.|++||||||+.++..+++++.+..|+..+. +..+| .
T Consensus 73 ~~~~~~~i~~~~~~~~iG~i~l~~~~~~~~~~~ei-g~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~ 151 (194)
T PRK10809 73 GSAFYFALLDPDEKEIIGVANFSNVVRGSFHACYL-GYSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKR 151 (194)
T ss_pred CcEEEEEEEECCCCeEEEEEEEEeecCCCeeeEEE-EEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHH
Confidence 3333455543 579999988866532 123454 67899999999999999999999998756898764 45566 5
Q ss_pred chhhhhhcCCeEeeec
Q 012402 325 AVGYFIKQGFTKEIYL 340 (464)
Q Consensus 325 AIgFYkKqGFtkeI~l 340 (464)
|.++|+|+||+.+..+
T Consensus 152 S~~l~ek~Gf~~~g~~ 167 (194)
T PRK10809 152 SGDLLARLGFEKEGYA 167 (194)
T ss_pred HHHHHHHCCCcEEeee
Confidence 9999999999976433
No 39
>PHA01807 hypothetical protein
Probab=99.00 E-value=6.4e-09 Score=95.22 Aligned_cols=81 Identities=10% Similarity=0.120 Sum_probs=61.1
Q ss_pred cCCceEEEEEECCEEEEEEEEEEecCCceEE---EEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEE--ccCc-c
Q 012402 251 DRSHKSVMVIRGNVVVGGITYRPYVSQKFGE---IAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLT--YADN-N 324 (464)
Q Consensus 251 D~~h~s~VlikdGkVIGGI~~R~f~~~~faE---IvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLT--yADn-~ 324 (464)
+.....+++..+|++||++++.........+ +..+.|.|++||+|||++||++++++|++ .|+..+.. ..+| .
T Consensus 50 ~~~~~~lva~~dg~lvG~~~l~~~~~~~~~~i~~l~~lYV~pe~RG~GiG~~Ll~~~~~~Ar~-~G~~~l~l~v~~~n~~ 128 (153)
T PHA01807 50 SNDRTELLVFRDGKLAGIAVLVFEDDPHVGPCLGVQWQYVLPEYRNAGVAREFLRELIRLAGE-GNLPLIAFSHREGEGR 128 (153)
T ss_pred CCCceEEEEEECCEEEEEEEEEcCCCcceeeeccceeEEECHHHcCCCHHHHHHHHHHHHHHH-CCCCEEEEEecCCcHH
Confidence 4455556666789999998886543332334 44479999999999999999999999998 88886643 2334 4
Q ss_pred chhhhhhc
Q 012402 325 AVGYFIKQ 332 (464)
Q Consensus 325 AIgFYkKq 332 (464)
|+.||++.
T Consensus 129 a~~~y~~~ 136 (153)
T PHA01807 129 YTIHYRRV 136 (153)
T ss_pred HHHHHHhc
Confidence 99999973
No 40
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=98.97 E-value=4.1e-09 Score=107.32 Aligned_cols=76 Identities=20% Similarity=0.241 Sum_probs=64.0
Q ss_pred eEEEEEECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcCC
Q 012402 255 KSVMVIRGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGF 334 (464)
Q Consensus 255 ~s~VlikdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqGF 334 (464)
..+++..+|+|||+..+. .+ .|..+||+|++||+|+|++||+++++++++ .|+.++.+++.+.+..||+|+||
T Consensus 32 ~~vv~~~~~~lVg~g~l~----g~--~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~-~G~~~l~l~Tk~~~~~fy~klGF 104 (332)
T TIGR00124 32 IFIAVYEDEEIIGCGGIA----GN--VIKCVAIDESLRGEGLALQLMTELENLAYE-LGRFHLFIFTKPEYAALFEYCGF 104 (332)
T ss_pred EEEEEEECCEEEEEEEEe----cC--EEEEEEEcHHHcCCCHHHHHHHHHHHHHHH-cCCCEEEEEECchHHHHHHHcCC
Confidence 445565789999965542 12 488999999999999999999999999998 89999988887777899999999
Q ss_pred eEe
Q 012402 335 TKE 337 (464)
Q Consensus 335 tke 337 (464)
...
T Consensus 105 ~~i 107 (332)
T TIGR00124 105 KTL 107 (332)
T ss_pred EEe
Confidence 874
No 41
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=98.96 E-value=1e-08 Score=98.60 Aligned_cols=79 Identities=14% Similarity=0.177 Sum_probs=61.7
Q ss_pred eEEEEEECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCc-cchhhhhhcC
Q 012402 255 KSVMVIRGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADN-NAVGYFIKQG 333 (464)
Q Consensus 255 ~s~VlikdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn-~AIgFYkKqG 333 (464)
..+++..++++||++.+..... ...+|..++|+|++||+|||++||+++++.++. ...+++..+| .|+.||+|+|
T Consensus 47 ~~~~~~~~~~~vG~~~~~~~~~-~~~~~~~l~V~p~~rg~GiG~~Ll~~~~~~~~~---~~~~~~~~~n~~a~~fy~~~G 122 (292)
T TIGR03448 47 RHLVAVDSDPIVGYANLVPARG-TDPAMAELVVHPAHRRRGIGRALIRALLAKGGG---RLRVWAHGDLPAARALASRLG 122 (292)
T ss_pred eEEEEEECCEEEEEEEEEcCCC-CcceEEEEEECHhhcCCCHHHHHHHHHHHhccC---ceEEEEcCCCHHHHHHHHHCC
Confidence 3566667899999988766432 236799999999999999999999999998753 2345555555 5999999999
Q ss_pred CeEe
Q 012402 334 FTKE 337 (464)
Q Consensus 334 Ftke 337 (464)
|+..
T Consensus 123 f~~~ 126 (292)
T TIGR03448 123 LVPT 126 (292)
T ss_pred CEEc
Confidence 9764
No 42
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=98.96 E-value=8.3e-09 Score=110.85 Aligned_cols=96 Identities=16% Similarity=0.271 Sum_probs=70.7
Q ss_pred cHHHHHHHhhcCCceEEEEEE--CCEEEEEEEEEE----ecC-CceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCC
Q 012402 241 PKEYIVRLVMDRSHKSVMVIR--GNVVVGGITYRP----YVS-QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDG 313 (464)
Q Consensus 241 pkEYI~RLVfD~~h~s~Vlik--dGkVIGGI~~R~----f~~-~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~G 313 (464)
..+++.....++....+++.. +|+|||++.+.. +.+ ....+|..++|+|++||+|||++||+++++++++ .|
T Consensus 110 ~~~~~~~~~~~~~~~~~vA~~~~~g~IVG~~~~~~~~~~~~d~~~~~~i~~l~V~P~~Rg~GIG~~Ll~~l~e~a~~-~G 188 (547)
T TIGR03103 110 RVDFVLDHRHSRAITYLVAEDEASGAIIGTVMGVDHRKAFNDPEHGSSLWCLAVDPQAAHPGVGEALVRALAEHFQS-RG 188 (547)
T ss_pred CHHHHHHHhcCCCceEEEEEECCCCeEEEEEEEEeccccccCCCCCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHH-CC
Confidence 345554444445555555554 589999876432 111 2236888999999999999999999999999998 89
Q ss_pred CcEEE--EccCc-cchhhhhhcCCeEe
Q 012402 314 LTHFL--TYADN-NAVGYFIKQGFTKE 337 (464)
Q Consensus 314 i~~LL--TyADn-~AIgFYkKqGFtke 337 (464)
+..+. +..+| .|+.||+|+||+..
T Consensus 189 ~~~i~L~V~~~N~~Ai~fY~klGf~~~ 215 (547)
T TIGR03103 189 CAYMDLSVMHDNEQAIALYEKLGFRRI 215 (547)
T ss_pred CCEEEEEEcCCCHHHHHHHHHCCCEEe
Confidence 98754 45566 59999999999763
No 43
>PRK10562 putative acetyltransferase; Provisional
Probab=98.91 E-value=5.6e-09 Score=90.83 Aligned_cols=74 Identities=20% Similarity=0.299 Sum_probs=56.2
Q ss_pred eEEEEEECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCc-cchhhhhhcC
Q 012402 255 KSVMVIRGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADN-NAVGYFIKQG 333 (464)
Q Consensus 255 ~s~VlikdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn-~AIgFYkKqG 333 (464)
..+++..++++||++++... ..|..++|+|++||+|||+.||+++++.+.. + .+.+..+| .|++||+|+|
T Consensus 49 ~~~v~~~~~~~iG~~~~~~~-----~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~---~-~~~v~~~N~~s~~~y~k~G 119 (145)
T PRK10562 49 QTWVWEEDGKLLGFVSVLEG-----RFVGALFVAPKAVRRGIGKALMQHVQQRYPH---L-SLEVYQKNQRAVNFYHAQG 119 (145)
T ss_pred cEEEEEECCEEEEEEEEeec-----cEEEEEEECHHHcCCCHHHHHHHHHHhhCCe---E-EEEEEcCChHHHHHHHHCC
Confidence 44666678899999887432 2466799999999999999999999886432 2 33344445 6999999999
Q ss_pred CeEe
Q 012402 334 FTKE 337 (464)
Q Consensus 334 Ftke 337 (464)
|+..
T Consensus 120 f~~~ 123 (145)
T PRK10562 120 FRIV 123 (145)
T ss_pred CEEc
Confidence 9984
No 44
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=98.88 E-value=1e-08 Score=98.66 Aligned_cols=81 Identities=23% Similarity=0.254 Sum_probs=61.8
Q ss_pred EEEEEE--CCEEEEEEEEEEecC-CceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEE--ccCc-cchhhh
Q 012402 256 SVMVIR--GNVVVGGITYRPYVS-QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLT--YADN-NAVGYF 329 (464)
Q Consensus 256 s~Vlik--dGkVIGGI~~R~f~~-~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLT--yADn-~AIgFY 329 (464)
.+++.. ++++||++.+..... ....+|..++|+|+|||||||+.||.++++++++ .|+..+.+ ..+| .|++||
T Consensus 200 ~~~a~~~~~~~~vG~~~~~~~~~~~~~~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~-~g~~~v~l~v~~~N~~a~~~y 278 (292)
T TIGR03448 200 LFLAFDDAPGELLGFHWTKVHPDEPALGEVYVVGVDPAAQGRGLGDALTLIGLHHLAA-RGLPAVMLYVEADNEAAVRTY 278 (292)
T ss_pred eEEEEECCCCcEEEEEEEEecCCCCceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHH-CCCCEEEEEEeCCCHHHHHHH
Confidence 355555 589999865544322 2245666689999999999999999999999998 78886543 4445 599999
Q ss_pred hhcCCeEe
Q 012402 330 IKQGFTKE 337 (464)
Q Consensus 330 kKqGFtke 337 (464)
+|+||+..
T Consensus 279 ~k~GF~~~ 286 (292)
T TIGR03448 279 EKLGFTVA 286 (292)
T ss_pred HHcCCEEc
Confidence 99999873
No 45
>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism]
Probab=98.81 E-value=1.1e-07 Score=88.49 Aligned_cols=129 Identities=15% Similarity=0.178 Sum_probs=89.6
Q ss_pred CcEEEEEecCCCchhhHHHHHHHHHHHhhc-CCCCcHHHHHHH-hhcCCc-eEEEEEE---CCEEEEEEEEEEe----cC
Q 012402 207 GNLKFVCLSNDGIDEHMVWLIGLKNIFARQ-LPNMPKEYIVRL-VMDRSH-KSVMVIR---GNVVVGGITYRPY----VS 276 (464)
Q Consensus 207 G~I~f~vv~Nd~~~~~liwL~~LkniFskQ-LPkMpkEYI~RL-VfD~~h-~s~Vlik---dGkVIGGI~~R~f----~~ 276 (464)
+.++|+.++.++.+.-+.+...|..+-.-. .+....+-+.+- ..|+.. .++++.. ++.|+|++.|... ..
T Consensus 2 ~~~~IR~at~~D~~~i~rLikela~Fek~~~~v~~te~~l~~~~F~d~~~~~~~v~~ie~~~~~~aGf~~yf~~ystW~~ 81 (163)
T KOG3216|consen 2 DNIRIRLATPKDCEDILRLIKELAEFEKLEDQVEATEENLARDGFIDPPFKHWLVAAIETSGEVVAGFALYFNNYSTWLG 81 (163)
T ss_pred CceEEEecCcccHHHHHHHHHHHHHHHHhccchhhchhhhhhhhccCCCccEEEEEEEecCCCceeEEeeeecccccccc
Confidence 578999999888877766666654443333 233334444442 225543 2333332 5689997776442 22
Q ss_pred CceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEE--EEc-cCccchhhhhhcCCeE
Q 012402 277 QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHF--LTY-ADNNAVGYFIKQGFTK 336 (464)
Q Consensus 277 ~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~L--LTy-ADn~AIgFYkKqGFtk 336 (464)
...+.|..+.|.|.|||||+|+.|+..+-+.|.+ .|+..+ ++- -+..|+.||+|.|++.
T Consensus 82 k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~-~G~~rv~w~vldwN~rAi~lY~k~gaq~ 143 (163)
T KOG3216|consen 82 KQGIYLEDLYVREQYRGKGIGSKLLKFVAEEADK-LGTPRVEWVVLDWNHRAILLYEKVGAQD 143 (163)
T ss_pred cceEEEEeeEecchhcccChHHHHHHHHHHHHHH-cCCCcEEEEEeccchhHHHHHHHhCccc
Confidence 3457899999999999999999999999999998 899853 442 3446999999999987
No 46
>PRK01346 hypothetical protein; Provisional
Probab=98.76 E-value=1.3e-07 Score=96.31 Aligned_cols=80 Identities=16% Similarity=0.199 Sum_probs=64.2
Q ss_pred ceEEEEEECCEEEEEEEEEEec-----C--CceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccch
Q 012402 254 HKSVMVIRGNVVVGGITYRPYV-----S--QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAV 326 (464)
Q Consensus 254 h~s~VlikdGkVIGGI~~R~f~-----~--~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AI 326 (464)
...+++..++++||++.+.++. . .....|..++|+|++||+|+|++||+++++.+++ .|+..++.+..+ .
T Consensus 47 ~~~~va~~~~~lvg~~~~~~~~~~~~~~~~~~~~~i~~v~V~P~~RgrGig~~Ll~~~l~~a~~-~g~~~~~L~~~~--~ 123 (411)
T PRK01346 47 DRTLGAFDGDEVVGTAGAFDLRLTVPGGAVLPAAGVTAVTVAPTHRRRGLLTALMREQLRRIRE-RGEPVAALTASE--G 123 (411)
T ss_pred CCeEEEEECCEEEEEEEEeccccccCCCCccceeEEEEEEEChhhcCCCHHHHHHHHHHHHHHH-CCCcEEEEECCc--h
Confidence 3457777789999988765432 1 1357899999999999999999999999999998 898876655433 5
Q ss_pred hhhhhcCCeE
Q 012402 327 GYFIKQGFTK 336 (464)
Q Consensus 327 gFYkKqGFtk 336 (464)
.||+|+||..
T Consensus 124 ~~Y~r~Gf~~ 133 (411)
T PRK01346 124 GIYGRFGYGP 133 (411)
T ss_pred hhHhhCCCee
Confidence 7999999976
No 47
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=98.70 E-value=8.8e-08 Score=90.03 Aligned_cols=80 Identities=23% Similarity=0.310 Sum_probs=67.0
Q ss_pred ceEEEEEECCEEEEEEEEEEecC----CceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhh
Q 012402 254 HKSVMVIRGNVVVGGITYRPYVS----QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYF 329 (464)
Q Consensus 254 h~s~VlikdGkVIGGI~~R~f~~----~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFY 329 (464)
..++|+.++|+|||.|.+-++.- .+.+-+.-+||+|++||||||+.||.+.++.++. .|...+++..| ..||
T Consensus 46 ~LslVA~d~g~vvG~Il~s~v~~~g~~~~~~~LaPLaV~p~~qg~GIG~~Lvr~~le~a~~-~G~~~v~vlGd---p~YY 121 (171)
T COG3153 46 TLSLVAEDDGEVVGHILFSPVTVGGEELGWLGLAPLAVDPEYQGQGIGSALVREGLEALRL-AGASAVVVLGD---PTYY 121 (171)
T ss_pred ceeEEEeeCCEEEEEEEEeEEEecCcccceEEEEeEEEchhhcCCcHHHHHHHHHHHHHHH-CCCCEEEEecC---cccc
Confidence 45788888999999888766432 2345578899999999999999999999999998 99998888754 7899
Q ss_pred hhcCCeEe
Q 012402 330 IKQGFTKE 337 (464)
Q Consensus 330 kKqGFtke 337 (464)
.|.||+..
T Consensus 122 ~rfGF~~~ 129 (171)
T COG3153 122 SRFGFEPA 129 (171)
T ss_pred cccCcEEc
Confidence 99999873
No 48
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=98.68 E-value=1.1e-07 Score=89.23 Aligned_cols=102 Identities=20% Similarity=0.245 Sum_probs=74.7
Q ss_pred EEEEEC-CEEEEEEEEEEecC---CceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEE--ccCc-cchhhh
Q 012402 257 VMVIRG-NVVVGGITYRPYVS---QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLT--YADN-NAVGYF 329 (464)
Q Consensus 257 ~Vlikd-GkVIGGI~~R~f~~---~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLT--yADn-~AIgFY 329 (464)
+|+..+ |+|+|+.++.+|.. -..+--..+.|+|+.||||+|++||+.|++++++ .|+..++- ..+| ..++|+
T Consensus 55 ~V~~~~~g~v~G~a~~~~fr~r~ay~~tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~-~g~~~lva~I~~~n~aSi~lh 133 (169)
T COG1247 55 VVAEEEDGKVLGYASAGPFRERPAYRHTVELSIYLDPAARGKGLGKKLLQALITEARA-LGVRELVAGIESDNLASIALH 133 (169)
T ss_pred EEEEcCCCeEEEEEEeeeccCccccceEEEEEEEECcccccccHHHHHHHHHHHHHHh-CCeEEEEEEEcCCCcHhHHHH
Confidence 444444 89999888766543 2223334699999999999999999999999998 99987653 4555 479999
Q ss_pred hhcCCeEeeecccccccccc-cCCCCceeeeeec
Q 012402 330 IKQGFTKEIYLEKDRWQGYI-KDYDGGILMECKI 362 (464)
Q Consensus 330 kKqGFtkeI~lpk~iw~GyI-KDYEgatLMEC~L 362 (464)
+|+||++...++.- |+. .-+=+-.+|++.|
T Consensus 134 ~~~GF~~~G~~~~v---g~k~g~wld~~~~~~~l 164 (169)
T COG1247 134 EKLGFEEVGTFPEV---GDKFGRWLDLVLMQLLL 164 (169)
T ss_pred HHCCCEEecccccc---ccccceEEeeeeeehhh
Confidence 99999997666653 443 2234566787754
No 49
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=98.65 E-value=2.8e-07 Score=77.90 Aligned_cols=80 Identities=26% Similarity=0.323 Sum_probs=61.4
Q ss_pred eEEEEEE--CCEEEEEEEEEEe-cCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEE--ccCc-cchhh
Q 012402 255 KSVMVIR--GNVVVGGITYRPY-VSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLT--YADN-NAVGY 328 (464)
Q Consensus 255 ~s~Vlik--dGkVIGGI~~R~f-~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLT--yADn-~AIgF 328 (464)
..+++.. ++++||.+.+... ...+.+||. +.|.+++||+|||+.++..+.+++.+..++..+.. ..+| .+..+
T Consensus 57 ~~~~i~~~~~~~~iG~i~~~~~~~~~~~~eig-~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~~~ 135 (142)
T PF13302_consen 57 YYFAIEDKDDGEIIGFIGLYNIDKNNNWAEIG-YWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASRRL 135 (142)
T ss_dssp EEEEEEETTTTEEEEEEEEEEEETTTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHHHH
T ss_pred eEEEEEeccCCceEEEeeeeecccCCCccccc-cchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHHHH
Confidence 3455555 3589999888433 356778986 77999999999999999999999954489997754 5666 48999
Q ss_pred hhhcCCe
Q 012402 329 FIKQGFT 335 (464)
Q Consensus 329 YkKqGFt 335 (464)
++|+||+
T Consensus 136 ~~k~GF~ 142 (142)
T PF13302_consen 136 LEKLGFE 142 (142)
T ss_dssp HHHTT-E
T ss_pred HHHcCCC
Confidence 9999995
No 50
>KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=98.63 E-value=2.1e-07 Score=85.35 Aligned_cols=125 Identities=20% Similarity=0.245 Sum_probs=82.0
Q ss_pred CcEEEEEecCCCch----hhHHHHHHHHHHHhhcCCCCcHHHHHHHhhcCCceEEEEEE--CCEEEEEEEEEEecCCce-
Q 012402 207 GNLKFVCLSNDGID----EHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIR--GNVVVGGITYRPYVSQKF- 279 (464)
Q Consensus 207 G~I~f~vv~Nd~~~----~~liwL~~LkniFskQLPkMpkEYI~RLVfD~~h~s~Vlik--dGkVIGGI~~R~f~~~~f- 279 (464)
+.+.+|...+++-. +.|-.|+...++-+.|.-+ .-+++... -..+..+|+.+ .++|||...+.. +..|
T Consensus 5 ~~~~lR~L~~~D~~kGf~elL~qLT~vG~vt~e~F~k-rf~~mk~~--~~~Y~i~Vied~~s~~vigtatL~I--E~KfI 79 (150)
T KOG3396|consen 5 DGFKLRPLEEDDYGKGFIELLKQLTSVGVVTREQFEK-RFEAMKKS--GDWYYIVVIEDKESEKVIGTATLFI--ERKFI 79 (150)
T ss_pred CceEEeecccccccchHHHHHHHHhhccccCHHHHHH-HHHHHHhc--CCcEEEEEEEeCCcCeEEEEEEEEE--ehhhh
Confidence 34788888888644 3444555555554444211 12222211 11233333333 379999655432 2222
Q ss_pred ------EEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcCCeEe
Q 012402 280 ------GEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTKE 337 (464)
Q Consensus 280 ------aEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqGFtke 337 (464)
..|..+.|++++|||++|+.|+..|.+.++. .|+..+..--+..-+.||+||||+..
T Consensus 80 h~~g~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~-lgcYKi~LdC~~~nv~FYeKcG~s~~ 142 (150)
T KOG3396|consen 80 HGCGSRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKS-LGCYKIILDCDPKNVKFYEKCGYSNA 142 (150)
T ss_pred hcccccCceeEEEeChhhhhhHHhHHHHHHHHHHHHh-cCcEEEEEecchhhhhHHHHcCcccc
Confidence 3478899999999999999999999999998 99998766545556999999999873
No 51
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=98.55 E-value=4.2e-07 Score=75.26 Aligned_cols=57 Identities=28% Similarity=0.433 Sum_probs=46.2
Q ss_pred EEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEE-EEccCc-cchhhhhhcCCeEe
Q 012402 280 GEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHF-LTYADN-NAVGYFIKQGFTKE 337 (464)
Q Consensus 280 aEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~L-LTyADn-~AIgFYkKqGFtke 337 (464)
.+|..+.|.|++||||||+.|+.++.+.+.+ .|..-+ .+..+| .|++||+|.||+..
T Consensus 22 g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~-~g~~~~l~v~~~N~~s~~ly~klGf~~~ 80 (86)
T PF08445_consen 22 GEIGGVYTLPEHRRRGLGSALVAALARELLE-RGKTPFLYVDADNEASIRLYEKLGFREI 80 (86)
T ss_dssp CCEEEEEE-GGGTTSSHHHHHHHHHHHHHHH-TTSEEEEEEETT-HHHHHHHHHCT-EEE
T ss_pred cEEEEEEECHHHcCCCHHHHHHHHHHHHHHh-CCCcEEEEEECCCHHHHHHHHHcCCEEE
Confidence 6899999999999999999999999999988 777744 445555 59999999999873
No 52
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=98.54 E-value=6.2e-07 Score=63.37 Aligned_cols=62 Identities=19% Similarity=0.246 Sum_probs=51.0
Q ss_pred EEEEECCEEEEEEEEEEec-CCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEE
Q 012402 257 VMVIRGNVVVGGITYRPYV-SQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLT 319 (464)
Q Consensus 257 ~VlikdGkVIGGI~~R~f~-~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLT 319 (464)
+++..++++||.+.+.... ....++|..++|++++||+|+|++||.++.+++++ .++..+..
T Consensus 2 ~~~~~~~~~ig~~~~~~~~~~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~-~~~~~v~~ 64 (65)
T cd04301 2 LVAEDDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARE-RGAKRLRL 64 (65)
T ss_pred EEEecCCEEEEEEEEEecCCCCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHH-cCCcEEEe
Confidence 4455678999988876643 13568899999999999999999999999999997 78877653
No 53
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=98.46 E-value=8e-07 Score=95.71 Aligned_cols=83 Identities=17% Similarity=0.280 Sum_probs=63.7
Q ss_pred ceEEEEEE---CCEEEEEEEEEEecCC-------ceEEEEEEE-----------eCCCccccCHHHHHHHHHHHHHHhhC
Q 012402 254 HKSVMVIR---GNVVVGGITYRPYVSQ-------KFGEIAFCA-----------ITADEQVKGYGTRLMNHLKQHARDVD 312 (464)
Q Consensus 254 h~s~Vlik---dGkVIGGI~~R~f~~~-------~faEIvfIA-----------Vsps~QGKGyGS~LMnhLke~Are~~ 312 (464)
...|.... ++.+||++.++.-... ..+-|..+. +++++||+|||++||+++++.|++ .
T Consensus 411 ~e~F~~y~~~~~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~-~ 489 (522)
T TIGR01211 411 TEFFLSYEDPKNDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAE-E 489 (522)
T ss_pred CeEEEEEEcCCCCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHH-C
Confidence 35566555 4689999988864321 112233333 358999999999999999999998 8
Q ss_pred CCcEEEEccCccchhhhhhcCCeEe
Q 012402 313 GLTHFLTYADNNAVGYFIKQGFTKE 337 (464)
Q Consensus 313 Gi~~LLTyADn~AIgFYkKqGFtke 337 (464)
|+..+.+.++..|..||+|+||...
T Consensus 490 G~~~i~v~s~~~A~~FY~klGf~~~ 514 (522)
T TIGR01211 490 GSEKILVISGIGVREYYRKLGYELD 514 (522)
T ss_pred CCCEEEEeeCchHHHHHHHCCCEEE
Confidence 9999888777789999999999874
No 54
>KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only]
Probab=98.44 E-value=6.4e-07 Score=85.86 Aligned_cols=81 Identities=21% Similarity=0.336 Sum_probs=62.7
Q ss_pred EEEEECC-EEEEEEEEEEecCCc--eEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcE-EEE-ccCc-cchhhhh
Q 012402 257 VMVIRGN-VVVGGITYRPYVSQK--FGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTH-FLT-YADN-NAVGYFI 330 (464)
Q Consensus 257 ~VlikdG-kVIGGI~~R~f~~~~--faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~-LLT-yADn-~AIgFYk 330 (464)
+++..++ ++||++.||...+.+ .+.+-.+-|.+++||||||+.||+++...+.. ..... .+| +.+| .|++||+
T Consensus 95 i~a~~~~~~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR~kGiGk~LL~~l~~~a~~-~~~~kVmLTVf~~N~~al~Fy~ 173 (202)
T KOG2488|consen 95 ICAWNNKSKLVGFTMFRFTVDTGDPVLYCYEVQVASAYRGKGIGKFLLDTLEKLADS-RHMRKVMLTVFSENIRALGFYH 173 (202)
T ss_pred EEEEcCCCceeeEEEEEEEcccCCeEEEEEEEeehhhhhccChHHHHHHHHHHHHHH-HHhhhheeeeecccchhHHHHH
Confidence 3333343 799999999876666 45566678999999999999999999999987 55553 344 5555 5999999
Q ss_pred hcCCeEee
Q 012402 331 KQGFTKEI 338 (464)
Q Consensus 331 KqGFtkeI 338 (464)
++||....
T Consensus 174 ~~gf~~~~ 181 (202)
T KOG2488|consen 174 RLGFVVDE 181 (202)
T ss_pred HcCcccCC
Confidence 99998753
No 55
>KOG3138 consensus Predicted N-acetyltransferase [General function prediction only]
Probab=98.36 E-value=1.1e-06 Score=83.95 Aligned_cols=121 Identities=13% Similarity=0.230 Sum_probs=77.7
Q ss_pred cEEEEEecCCCchhhHHHHHHHHHHHhhcCCCCcHHHH----HHHhhcCCceEEEEEECCEEEEEEEEEEecC-Cc----
Q 012402 208 NLKFVCLSNDGIDEHMVWLIGLKNIFARQLPNMPKEYI----VRLVMDRSHKSVMVIRGNVVVGGITYRPYVS-QK---- 278 (464)
Q Consensus 208 ~I~f~vv~Nd~~~~~liwL~~LkniFskQLPkMpkEYI----~RLVfD~~h~s~VlikdGkVIGGI~~R~f~~-~~---- 278 (464)
.++++.++.++..+...+... =. |.+|. ...+.......+++..+ ..||+++.+.... ++
T Consensus 16 ~~~l~~it~~nl~~~~~l~~~-------~f---P~~y~~kfy~~~~~~~~~~~~A~~~~-~~v~a~~~k~~~~~~~~~r~ 84 (187)
T KOG3138|consen 16 LIELRLITPNNLKQLKQLNED-------IF---PISYVDKFYPDVLSNGDLTQLAYYNE-IAVGAVACKLIKFVQNAKRL 84 (187)
T ss_pred ceeeccCCcchHHHHHHHhcc-------cc---CcchHHHHHHHHHhcCCHHHhhhhcc-ccccceeeeehhhhhhhhhh
Confidence 477877776655444443332 12 33333 33333334344555444 4455555544221 11
Q ss_pred ----eEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCC-CcEE---EEccCccchhhhhhcCCeEeeec
Q 012402 279 ----FGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDG-LTHF---LTYADNNAVGYFIKQGFTKEIYL 340 (464)
Q Consensus 279 ----faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~G-i~~L---LTyADn~AIgFYkKqGFtkeI~l 340 (464)
+..|..+.|.+.||.+|||+.||+++++++.+ .+ +..+ +...++.|+.||++.||+....+
T Consensus 85 ~~~~~~yi~~Lgvl~~yR~~gIGs~Ll~~~~~~~~~-~~~~~~v~lHv~~~n~~ai~~Y~~~gF~~~~~~ 153 (187)
T KOG3138|consen 85 FGNRVIYILSLGVLPRYRNKGIGSKLLEFVKKYCSE-AHQCRRVYLHVQAVNESAIEFYEKRGFEIVERL 153 (187)
T ss_pred hccceeEEEeecccHHHHhcchHHHHHHHHHHHHhc-ccccceEEEEEEeCCCcHHHHHHhcCceEeecc
Confidence 47899999999999999999999999999987 44 4432 23567789999999999986433
No 56
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=98.35 E-value=2.3e-06 Score=70.30 Aligned_cols=71 Identities=18% Similarity=0.280 Sum_probs=56.9
Q ss_pred EEEEECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhc
Q 012402 257 VMVIRGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQ 332 (464)
Q Consensus 257 ~VlikdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKq 332 (464)
|.+..+|+.+|.|.|+. ..+.+.|....|.|++||||+|+.||+.+.++|++ .|.+-.-++ .++..|++|+
T Consensus 2 F~~~~~g~~~a~l~Y~~--~~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~-~~~kv~p~C--~y~~~~~~~h 72 (78)
T PF14542_consen 2 FELKDDGEEIAELTYRE--DGGVIVITHTEVPPELRGQGIAKKLVEAALDYARE-NGLKVVPTC--SYVAKYFRRH 72 (78)
T ss_dssp EEEESSTTEEEEEEEEE--SSSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHH-TT-EEEETS--HHHHHHHHH-
T ss_pred EEEEECCEEEEEEEEEe--CCCEEEEEEEEECccccCCcHHHHHHHHHHHHHHH-CCCEEEEEC--HHHHHHHHhC
Confidence 44555788999999976 56778999999999999999999999999999998 787766554 2577888775
No 57
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=98.26 E-value=7.3e-06 Score=78.72 Aligned_cols=94 Identities=21% Similarity=0.349 Sum_probs=61.4
Q ss_pred HHHHHHHhhcCCceEEEEEECC--EEEEEEEEEE------------------------------------ecCCceEEEE
Q 012402 242 KEYIVRLVMDRSHKSVMVIRGN--VVVGGITYRP------------------------------------YVSQKFGEIA 283 (464)
Q Consensus 242 kEYI~RLVfD~~h~s~VlikdG--kVIGGI~~R~------------------------------------f~~~~faEIv 283 (464)
.+-+..+.-+|.|.-|++...+ +|+|.+..-. |.....+-|+
T Consensus 15 PnDL~~LlDaP~h~l~~l~~~~~p~il~~~~v~~EG~l~~~l~~~i~~g~rRp~G~LiP~~L~~~~~~~~f~~l~g~RIv 94 (196)
T PF13718_consen 15 PNDLQLLLDAPNHRLFVLLQPGDPDILGVAQVALEGGLSKELIEAILSGGRRPKGHLIPQTLAQHFGDPEFAQLSGARIV 94 (196)
T ss_dssp HHHHHHHHH-TTEEEEEEE-SS--SEEEEEEEEEEE---HHHHHHHHTTS---SS-HHHHHHHHHSS-TTGGGSEEEEEE
T ss_pred HHHHHHHhcCCcceeehhccCCCceEEEEEEEEecCCCCHHHHHHHHhCCCCCCCCCHHHHHHHHhCCHHHHhhcceeEE
Confidence 3445556667888888888888 9998655311 0011236699
Q ss_pred EEEeCCCccccCHHHHHHHHHHHHHH-------------------------hhCCCcEEEE-ccCc-cchhhhhhcCCeE
Q 012402 284 FCAITADEQVKGYGTRLMNHLKQHAR-------------------------DVDGLTHFLT-YADN-NAVGYFIKQGFTK 336 (464)
Q Consensus 284 fIAVsps~QGKGyGS~LMnhLke~Ar-------------------------e~~Gi~~LLT-yADn-~AIgFYkKqGFtk 336 (464)
.|||+|++|++|||++|++.++++++ . .++.++=+ |+-+ .=..|++|+||..
T Consensus 95 RIAvhP~~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~vDylGtSFG~t~~Ll~FW~k~gf~p 173 (196)
T PF13718_consen 95 RIAVHPDLQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRP-PGVDYLGTSFGATPELLKFWQKNGFVP 173 (196)
T ss_dssp EEEE-CCC-SSSHHHHHHHHHHHT------------------------------S-SEEEEEEE--HHHHHHHHCTT-EE
T ss_pred EEEEChhhhcCCHHHHHHHHHHHHHhhhcccccccccccccccccccccccc-cCCCEEEeccCCCHHHHHHHHHCCcEE
Confidence 99999999999999999999999993 3 56666644 4433 3589999999986
No 58
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=98.24 E-value=1.4e-05 Score=69.39 Aligned_cols=79 Identities=23% Similarity=0.233 Sum_probs=61.9
Q ss_pred CEEEEEEEEEEecC---CceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEE--EccCcc-chhhhhhcCCeE
Q 012402 263 NVVVGGITYRPYVS---QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFL--TYADNN-AVGYFIKQGFTK 336 (464)
Q Consensus 263 GkVIGGI~~R~f~~---~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LL--TyADn~-AIgFYkKqGFtk 336 (464)
+++||.|.+..+.. .+..|| ...+.|.+||||||+..+..+.+++-...++..+. ++.+|. ++++++|+||+.
T Consensus 77 ~~~iG~~~~~~~~~~~~~~~~~i-g~~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv~ek~Gf~~ 155 (187)
T COG1670 77 GELIGVIGLSDIDRAANGDLAEI-GYWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRVYEKLGFRL 155 (187)
T ss_pred CeEEEEEEEEEeccccccceEEE-EEEEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHHHHHcCChh
Confidence 48999888876542 455555 55669999999999999999999998767887664 456664 899999999998
Q ss_pred eeeccc
Q 012402 337 EIYLEK 342 (464)
Q Consensus 337 eI~lpk 342 (464)
+..+..
T Consensus 156 eg~~~~ 161 (187)
T COG1670 156 EGELRQ 161 (187)
T ss_pred hhhhhh
Confidence 654433
No 59
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=98.18 E-value=8.3e-06 Score=81.53 Aligned_cols=83 Identities=17% Similarity=0.241 Sum_probs=65.6
Q ss_pred CceEEEEEECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcE-EEEccCcc-chhhhh
Q 012402 253 SHKSVMVIRGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTH-FLTYADNN-AVGYFI 330 (464)
Q Consensus 253 ~h~s~VlikdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~-LLTyADn~-AIgFYk 330 (464)
...++.+..+|+||...-.... .....+|.-++++|+||||||++.|+..|.+..-. .|.+. |+.+.+|. |.+.|+
T Consensus 176 ~~~~~f~~~d~~iVa~A~t~a~-~~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~-eGk~~~L~~~~~N~~A~~iY~ 253 (268)
T COG3393 176 RSRTYFLEGDGKIVAKAETAAE-NPAYAQINGVYTHPEYRGKGYATALVATLAAKLLA-EGKIPCLFVNSDNPVARRIYQ 253 (268)
T ss_pred ceeEEEEccCCcEEEeeecccc-CCcceEEEEEEcCHHHccccHHHHHHHHHHHHHHh-CCCeeEEEEecCCHHHHHHHH
Confidence 3456666667799986554432 34568999999999999999999999999888887 77775 45567775 999999
Q ss_pred hcCCeEe
Q 012402 331 KQGFTKE 337 (464)
Q Consensus 331 KqGFtke 337 (464)
|.||+..
T Consensus 254 riGF~~~ 260 (268)
T COG3393 254 RIGFREI 260 (268)
T ss_pred HhCCeec
Confidence 9999984
No 60
>KOG3397 consensus Acetyltransferases [General function prediction only]
Probab=98.18 E-value=1.1e-05 Score=77.13 Aligned_cols=133 Identities=17% Similarity=0.205 Sum_probs=88.4
Q ss_pred HHHHHHHHhhcCCCCcHHHHHHHhh--cCCceEEEEEEC--CEEEEEEEEEEecCCce-EEEEEEEeCCCccccCHHHHH
Q 012402 226 LIGLKNIFARQLPNMPKEYIVRLVM--DRSHKSVMVIRG--NVVVGGITYRPYVSQKF-GEIAFCAITADEQVKGYGTRL 300 (464)
Q Consensus 226 L~~LkniFskQLPkMpkEYI~RLVf--D~~h~s~Vlikd--GkVIGGI~~R~f~~~~f-aEIvfIAVsps~QGKGyGS~L 300 (464)
|.+.-.+.-.|-|+-....+-.|-. |.--.++++..+ .+|||..-+-.++.+.. .-+..+.|+...||+|+|++|
T Consensus 25 lk~~~~LIN~eWPRS~TsR~hSL~~ScDs~P~sL~Ll~E~~~~VigH~rLS~i~n~~~al~VEsVVV~k~~RG~GFGk~l 104 (225)
T KOG3397|consen 25 LKESMTLINSEWPRSDTSREHSLKKSCDSPPMSLLLLNEENDEVLGHSRLSHLPNRDHALWVESVVVKKDQRGLGFGKFL 104 (225)
T ss_pred HHHHHHHHhccCCccchhhhhhhhcccCCCCeeeeeecccccceeeeeccccCCCCCceeEEEEEEEehhhccccHHHHH
Confidence 4444555666777765555544433 444456777654 58999776655544332 224448899999999999999
Q ss_pred HHHHHHHHHhhCCCcEEEEccCccchhhhhhcCCeEeeecccccccccccCCCCceeeeeecCCCCCCcCHHHHHHHHHH
Q 012402 301 MNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTKEIYLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQ 380 (464)
Q Consensus 301 MnhLke~Are~~Gi~~LLTyADn~AIgFYkKqGFtkeI~lpk~iw~GyIKDYEgatLMEC~L~Pki~Y~~l~~mI~~Qk~ 380 (464)
|+.+++++|. .|+..+....+ .+.+||+..||+.- .-|..|. ..-|.+..|...|+.
T Consensus 105 Mk~~E~~~R~-~gf~~~yLsT~-DQ~~FYe~lGYe~c---------~Pi~~~~------------~~~c~LPa~~~~~~~ 161 (225)
T KOG3397|consen 105 MKSTEKWMRE-KGFNEAYLSTD-DQCRFYESLGYEKC---------DPIVHST------------TATCILPAMNHFQNA 161 (225)
T ss_pred HHHHHHHHHH-hhhhheeeecc-cchhhhhhhccccc---------Cceeccc------------ccceechhhhhhhcc
Confidence 9999999998 88886544332 36999999999872 2233332 134667777777766
Q ss_pred H
Q 012402 381 A 381 (464)
Q Consensus 381 ~ 381 (464)
.
T Consensus 162 ~ 162 (225)
T KOG3397|consen 162 A 162 (225)
T ss_pred c
Confidence 4
No 61
>COG5076 Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription]
Probab=98.10 E-value=2.7e-07 Score=94.58 Aligned_cols=183 Identities=32% Similarity=0.414 Sum_probs=147.8
Q ss_pred HhcCcEEEEEecCCCch-hhHHHHHHHHHHHhhcCCCCcHHHHHHHhhcCCceEEEEEE-CCEEEEEEEEEEec-CC---
Q 012402 204 EEAGNLKFVCLSNDGID-EHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIR-GNVVVGGITYRPYV-SQ--- 277 (464)
Q Consensus 204 E~~G~I~f~vv~Nd~~~-~~liwL~~LkniFskQLPkMpkEYI~RLVfD~~h~s~Vlik-dGkVIGGI~~R~f~-~~--- 277 (464)
+..+...++...++..+ .+..-+.++++++..|+..|+.+++.+.+++..+....... ....++++++.++. ..
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 98 (371)
T COG5076 19 EEFGNELLRLVDNDSSPFPNAPEEEGSKNLFQKQLKRMPKEYITSIVDDREPGSMANVNDDLENVGGITYSPFEKNRPES 98 (371)
T ss_pred hhhhhhhhhccccCCCcccchhhhccccccchhhhcccchhhhhhhhcccccccccccCcchhcccCcccCCcccccccc
Confidence 77778888888888877 88889999999999999999999999999865554333332 45788999988764 22
Q ss_pred -ceEEEEEEEeCCCccccCHHHHHHHHHHH--HHHhhCCCcEEEEccCccchhhhhhcCCeEeeecccccccccccCCCC
Q 012402 278 -KFGEIAFCAITADEQVKGYGTRLMNHLKQ--HARDVDGLTHFLTYADNNAVGYFIKQGFTKEIYLEKDRWQGYIKDYDG 354 (464)
Q Consensus 278 -~faEIvfIAVsps~QGKGyGS~LMnhLke--~Are~~Gi~~LLTyADn~AIgFYkKqGFtkeI~lpk~iw~GyIKDYEg 354 (464)
.+.+++++++....+.+|+|+.++.+.++ .......+....+++++.++..+.++++......-..+|.+.++.++.
T Consensus 99 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~F~~~p~k~~~ 178 (371)
T COG5076 99 LRFDEIVFLAIESVTPESGLGSLLMAHLKTSVKKRKTPKIEDELLYADNKAIAKFKKQLFLRDGRFLSSIFLGLPSKREY 178 (371)
T ss_pred ccccceeccccccccccccccccccccchHHHHhhcCCcccchhHHHHHHHHHHHHHHhhcccccccccccccCCccccC
Confidence 36889999999999999999999999986 222224555677888999999999999998888878899999999999
Q ss_pred ceeeeeecCCCCCCcCHHHHHHHHHHHHHHHHH
Q 012402 355 GILMECKIDPKLPYTDLSTMIRRQRQAIDEKIR 387 (464)
Q Consensus 355 atLMEC~L~Pki~Y~~l~~mI~~Qk~~l~~ki~ 387 (464)
+..|+|--.| |.+..+..-|..++-...+.+.
T Consensus 179 PdYy~iIk~P-m~L~~i~kkl~~~~Y~s~eef~ 210 (371)
T COG5076 179 PDYYEIIKSP-MDLLTIQKKLKNGRYKSFEEFV 210 (371)
T ss_pred CChheeecch-hhHHHHHHHHHhhhhhhHHHHH
Confidence 9999999999 8888777777766544444443
No 62
>KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only]
Probab=98.09 E-value=2.6e-05 Score=73.67 Aligned_cols=119 Identities=19% Similarity=0.239 Sum_probs=84.2
Q ss_pred cCCCCcHHHHHHHhhcC----CceEEEEEE-CCEEEEEEEEEEec----CCceEEEEEEEeCCCccccCHHHHHHHHHHH
Q 012402 236 QLPNMPKEYIVRLVMDR----SHKSVMVIR-GNVVVGGITYRPYV----SQKFGEIAFCAITADEQVKGYGTRLMNHLKQ 306 (464)
Q Consensus 236 QLPkMpkEYI~RLVfD~----~h~s~Vlik-dGkVIGGI~~R~f~----~~~faEIvfIAVsps~QGKGyGS~LMnhLke 306 (464)
.|-..|.+|..++.+-. ...+||..+ +|+|||++....+. ......|..+||.-+||+.|+|++||+....
T Consensus 19 Nl~~lpENyqmkyylyh~lswp~lSyVA~D~~gkiVGYvlAkmee~p~~~~~hGhItSlaV~rs~RrlGla~kLm~qa~r 98 (193)
T KOG3235|consen 19 NLLNLPENYQMKYYLYHGLSWPQLSYVAEDENGKIVGYVLAKMEEDPDDEPPHGHITSLAVKRSYRRLGLAQKLMNQASR 98 (193)
T ss_pred ccccCcHHHhHHHHHHhhcccccceEEEEcCCCcEEEEeeeehhhcccCCCCCCeeEEeeehhhHHHhhHHHHHHHHHHH
Confidence 35566788887665422 345777774 68999998887765 3345689999999999999999999999877
Q ss_pred HHHhhCCCcEE--EEccCc-cchhhhh-hcCCeEeeecccccccccccCCCCceeee
Q 012402 307 HARDVDGLTHF--LTYADN-NAVGYFI-KQGFTKEIYLEKDRWQGYIKDYDGGILME 359 (464)
Q Consensus 307 ~Are~~Gi~~L--LTyADn-~AIgFYk-KqGFtkeI~lpk~iw~GyIKDYEgatLME 359 (464)
-..+..+..++ .+..+| .|+.+|+ ..||.+- .+.. -|..|-|+|.-|.
T Consensus 99 Am~E~~~A~yvsLHVR~SNraAl~LY~~tl~F~v~-eve~----kYYadGedAyaM~ 150 (193)
T KOG3235|consen 99 AMVEVYEAKYVSLHVRKSNRAALHLYKNTLGFVVC-EVEP----KYYADGEDAYAMR 150 (193)
T ss_pred HHHHhhcceEEEEeeecccHHHHHhhhhccceEEe-eccc----ccccccHHHHHHH
Confidence 76665666654 345556 5999999 9999873 4433 2334445554443
No 63
>KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only]
Probab=98.02 E-value=1.7e-05 Score=74.45 Aligned_cols=80 Identities=16% Similarity=0.228 Sum_probs=60.2
Q ss_pred CCEEEEEEEEEEec--CCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEE--EEccCcc-chhhhhhcCCeE
Q 012402 262 GNVVVGGITYRPYV--SQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHF--LTYADNN-AVGYFIKQGFTK 336 (464)
Q Consensus 262 dGkVIGGI~~R~f~--~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~L--LTyADn~-AIgFYkKqGFtk 336 (464)
.+++.|+|..+.-. .+.+..+.-++|.|+||+.|+|+.||+.+++.... .+...+ ++..+|+ ||.||+|.||.+
T Consensus 50 ~~~imgyimgk~Eg~~~~wh~HvTAltVap~~Rrl~la~~lm~~led~~d~-~~a~fvDLfVr~sN~iAI~mYkkLGY~~ 128 (173)
T KOG3234|consen 50 TGEIMGYIMGKVEGKDTEWHGHVTALTVAPDYRRLGLAAKLMDTLEDVSDV-DNAYFVDLFVRVSNQIAIDMYKKLGYSV 128 (173)
T ss_pred CCceEEEEeeeccccCcceeeEEEEEEechhHHHHHHHHHHHHHHHHHHHh-hhhheeeeeeeccchhHHHHHHhcCceE
Confidence 47888988875521 22346788899999999999999999999999886 544443 3444554 999999999988
Q ss_pred eeeccc
Q 012402 337 EIYLEK 342 (464)
Q Consensus 337 eI~lpk 342 (464)
=.++.+
T Consensus 129 YR~Vi~ 134 (173)
T KOG3234|consen 129 YRTVIE 134 (173)
T ss_pred EEeeee
Confidence 545533
No 64
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=97.92 E-value=3.3e-05 Score=71.69 Aligned_cols=81 Identities=15% Similarity=0.182 Sum_probs=61.2
Q ss_pred EEEEEE-CCEEEEEEEEEEecCCceEE--EEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhc
Q 012402 256 SVMVIR-GNVVVGGITYRPYVSQKFGE--IAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQ 332 (464)
Q Consensus 256 s~Vlik-dGkVIGGI~~R~f~~~~faE--IvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKq 332 (464)
.+.+.. +|++++++-+.+ +...+.+ |-.++|+|+.||+|+|++||..+++.+.+...-+-+...+..+...||..+
T Consensus 51 Hl~~~~~~g~LvAyaRLl~-~~~~~~~~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQahLq~fYa~~ 129 (155)
T COG2153 51 HLLGWTPDGELVAYARLLP-PGAEYEEVSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGAQAHLQDFYASF 129 (155)
T ss_pred eEEEEcCCCeEEEEEecCC-CCCCcCceeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeEEehHHHHHHHHHHh
Confidence 355555 899999654433 2334444 888999999999999999999999999872223346666666789999999
Q ss_pred CCeEe
Q 012402 333 GFTKE 337 (464)
Q Consensus 333 GFtke 337 (464)
||...
T Consensus 130 GFv~~ 134 (155)
T COG2153 130 GFVRV 134 (155)
T ss_pred CcEEc
Confidence 99873
No 65
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=97.90 E-value=1.2e-05 Score=58.90 Aligned_cols=44 Identities=25% Similarity=0.428 Sum_probs=38.9
Q ss_pred EEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcCC
Q 012402 285 CAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGF 334 (464)
Q Consensus 285 IAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqGF 334 (464)
++|+|++||+|+|+.||++++++++. .|+. .+..++.+|+++||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~-~g~~-----~~~~~~~~~~~~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARK-RGIS-----LNRLALEVYEKNGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHH-cCce-----ehHHHHHHHHhcCC
Confidence 99999999999999999999999997 6766 33458999999998
No 66
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=97.82 E-value=9.9e-05 Score=82.76 Aligned_cols=135 Identities=21% Similarity=0.323 Sum_probs=83.5
Q ss_pred HHHHHHHhc--CcEEEEEecCCCc---hhhHHHHHHH--HHHHhhcCCCCcHHHHHHHhhcCCceEEEEEECC-EEEEEE
Q 012402 198 ELLKREEEA--GNLKFVCLSNDGI---DEHMVWLIGL--KNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRGN-VVVGGI 269 (464)
Q Consensus 198 ~~a~~eE~~--G~I~f~vv~Nd~~---~~~liwL~~L--kniFskQLPkMpkEYI~RLVfD~~h~s~VlikdG-kVIGGI 269 (464)
++++.+... +.++|..+..... +..+.-+-++ .+.|.. ..+=+.+++-.|.|+.+++..++ ++|+.+
T Consensus 412 Ep~~~~~~~~~~~~~~~~~~~~~~~~~ee~Lr~~~gllV~AHYRn-----sP~DL~~L~DaP~h~~~al~~~~~~~va~~ 486 (758)
T COG1444 412 EPAELEPEDLRGSLEILEVDQRDLLFDEELLRQVYGLLVSAHYRN-----SPNDLRRLLDAPHHHIFALRAPEGKPVAVW 486 (758)
T ss_pred CccCCCccccccceeeeeccHHhhhhCHHHHHHHHhHHhhhhccC-----CHHHHHHHhcCCCCeeEEEEcCCCceEEEE
Confidence 444443333 8899988876542 2222222221 334443 23345556656677777776665 555432
Q ss_pred EE------------------EE-----------------ecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCC
Q 012402 270 TY------------------RP-----------------YVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGL 314 (464)
Q Consensus 270 ~~------------------R~-----------------f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi 314 (464)
.+ |+ |..-.-.-|+.|||+|++|++|||++||+++.++++ .++
T Consensus 487 qva~EG~l~~~~i~~~~~g~r~~GnlIp~~l~~~~~~~~fa~l~G~RIvRIAvhPe~q~~GiGsrlL~~l~~~a~--~~~ 564 (758)
T COG1444 487 QVAEEGGLSDELIDIWLGGRRPRGNLIPDLLAKHHRDPEFAKLVGWRIVRIAVHPELQRMGIGSRLLALLIEEAR--KGL 564 (758)
T ss_pred EeeccCCCcHHHHHHHhcCCCCCCcccHHHHHHhhcchhhcccceeeEEEEEeCHHHHhcCHHHHHHHHHHHHHh--cCC
Confidence 21 11 000111459999999999999999999999999997 367
Q ss_pred cEEEE-ccCc-cchhhhhhcCCeEeeec
Q 012402 315 THFLT-YADN-NAVGYFIKQGFTKEIYL 340 (464)
Q Consensus 315 ~~LLT-yADn-~AIgFYkKqGFtkeI~l 340 (464)
..+-+ |.-+ .=..|+.||||.. +.+
T Consensus 565 DwlgvsFG~t~~L~rFW~rnGF~p-Vhl 591 (758)
T COG1444 565 DWLGVSFGYTEELLRFWLRNGFVP-VHL 591 (758)
T ss_pred CEEeeccCCCHHHHHHHHHcCeEE-EEe
Confidence 77644 5433 4699999999986 344
No 67
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=97.79 E-value=0.00026 Score=70.83 Aligned_cols=81 Identities=15% Similarity=0.107 Sum_probs=62.0
Q ss_pred ceEEEEEECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcC
Q 012402 254 HKSVMVIRGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQG 333 (464)
Q Consensus 254 h~s~VlikdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqG 333 (464)
...|+++++|+||.+|.-... ..+.+|| .|+..|+|||||+++.+..+++.++.+ +|+.=.+...+...+.+=+|.|
T Consensus 165 G~Gf~i~~~~~iVs~~~s~~~-~~~~~EI-~I~T~~~yR~kGLA~~~aa~~I~~Cl~-~~l~P~WDc~N~~S~~lA~kLG 241 (265)
T PF12746_consen 165 GFGFCILHDGEIVSGCSSYFV-YENGIEI-DIETHPEYRGKGLATAVAAAFILECLE-NGLYPSWDCHNLASIALAEKLG 241 (265)
T ss_dssp --EEEEEETTEEEEEEEEEEE-ETTEEEE-EEEE-CCCTTSSHHHHHHHHHHHHHHH-TT-EEE-EESSHHHHHHHHHCT
T ss_pred CcEEEEEECCEEEEEEEEEEE-ECCEEEE-EEEECHHhhcCCHHHHHHHHHHHHHHH-CCCCcCeeCCCHHHHHHHHHcC
Confidence 367999999999987654333 3566888 789999999999999999999999998 8988766665556899999999
Q ss_pred CeEe
Q 012402 334 FTKE 337 (464)
Q Consensus 334 Ftke 337 (464)
|+..
T Consensus 242 f~~~ 245 (265)
T PF12746_consen 242 FHFD 245 (265)
T ss_dssp --EE
T ss_pred Cccc
Confidence 9874
No 68
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=97.55 E-value=0.0012 Score=60.09 Aligned_cols=115 Identities=16% Similarity=0.275 Sum_probs=66.1
Q ss_pred EEEEEecCCCchhhHHHHHHHHHHHhhcCCCCcHHHHHHHhhcCCceEEEEEECCEEEEEEEEEEecCCceEEEEEEEeC
Q 012402 209 LKFVCLSNDGIDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRGNVVVGGITYRPYVSQKFGEIAFCAIT 288 (464)
Q Consensus 209 I~f~vv~Nd~~~~~liwL~~LkniFskQLPkMpkEYI~RLVfD~~h~s~VlikdGkVIGGI~~R~f~~~~faEIvfIAVs 288 (464)
|.|+-+++-+ ++ -+.+|.-|| |.-+.+++...+ +..+.-|+..-+++++|++-+.. +....+|..++|.
T Consensus 2 LTI~rl~~ls-~Q---d~iDL~KIw----p~~~~~~l~~~l-~~~~~l~aArFNdRlLgAv~v~~--~~~~~~L~~l~VR 70 (128)
T PF12568_consen 2 LTIERLTTLS-EQ---DRIDLAKIW----PQQDPEQLEQWL-DEGHRLFAARFNDRLLGAVKVTI--SGQQAELSDLCVR 70 (128)
T ss_dssp -EEEE-SS---HH---HHHHHHHH-----TTS-----------SSEEEEEEEETTEEEEEEEEEE--ETTEEEEEEEEE-
T ss_pred eEEEEcCCCC-HH---HHHHHHHhC----CCCCHHHHHHHh-ccCCeEEEEEechheeeeEEEEE--cCcceEEeeEEEe
Confidence 3444454432 23 344566677 666777776555 56666666667999999877654 3456899999999
Q ss_pred CCccccCHHHHHHHHHHHHHHhhCCCcEEEEccC-cc------chhhhhhcCCeEe
Q 012402 289 ADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYAD-NN------AVGYFIKQGFTKE 337 (464)
Q Consensus 289 ps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyAD-n~------AIgFYkKqGFtke 337 (464)
+--|++|+|..||+.+...+. .+.++..-.+ .. --+|-+.|||...
T Consensus 71 evTRrRGVG~yLlee~~rq~p---~i~~w~l~~~~~~~~~~~~~~~Fm~a~GF~~~ 123 (128)
T PF12568_consen 71 EVTRRRGVGLYLLEEVLRQLP---DIKHWWLADEGVEPQDRAVMAAFMQACGFSAQ 123 (128)
T ss_dssp TT-SSSSHHHHHHHHHHHHS----S--EEEE--TT-S--THHHHHHHHHHHT-EE-
T ss_pred eccccccHHHHHHHHHHHHCC---CCcEEEEecCCCcccchHHHHHHHHHcCcccc
Confidence 999999999999999888863 5777654322 11 2489999999764
No 69
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=97.54 E-value=0.0069 Score=51.04 Aligned_cols=113 Identities=14% Similarity=0.163 Sum_probs=79.0
Q ss_pred HHHHhcCcEEEEEecCCCchhhHHHHHHHHHHHhhc---C-CCCcHHHHHHHhhcC----CceEEEEEECCEEEEEEEEE
Q 012402 201 KREEEAGNLKFVCLSNDGIDEHMVWLIGLKNIFARQ---L-PNMPKEYIVRLVMDR----SHKSVMVIRGNVVVGGITYR 272 (464)
Q Consensus 201 ~~eE~~G~I~f~vv~Nd~~~~~liwL~~LkniFskQ---L-PkMpkEYI~RLVfD~----~h~s~VlikdGkVIGGI~~R 272 (464)
+.-++.|.++|++.... .....++.-+.+.+.++ . +..+.+|+.+++... ...-+++..+|++||+...-
T Consensus 12 r~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~g~~va~~~~~ 89 (142)
T PF13480_consen 12 RRAEKLGGVRFEVATDP--ADLEAFYELYRESWARRHGGFAPPFSRDFFRDLLRSLAESGRLRLFVLYDGGEPVAFALGF 89 (142)
T ss_pred HHHHhcCCEEEEEeCCH--HHHHHHHHHHHHHHhhhhCCCCCcchHHHHHHHHHhhccCCCEEEEEEEECCEEEEEEEEE
Confidence 44456789999887522 23333444445556665 2 345788888887643 22334444689999976543
Q ss_pred EecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEE
Q 012402 273 PYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFL 318 (464)
Q Consensus 273 ~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LL 318 (464)
. ..+.+.....+++++++..+.|..|+-+++++|.+ .|+..+-
T Consensus 90 ~--~~~~~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~-~g~~~~d 132 (142)
T PF13480_consen 90 R--HGGTLYYWYGGYDPEYRKYSPGRLLLWEAIRWAIE-RGLRYFD 132 (142)
T ss_pred E--ECCEEEEEEEEECHhhHhCCHHHHHHHHHHHHHHH-CCCCEEE
Confidence 3 34567788899999999999999999999999998 8987663
No 70
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=97.44 E-value=0.00071 Score=69.22 Aligned_cols=72 Identities=19% Similarity=0.270 Sum_probs=59.1
Q ss_pred CCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcCCeEeeec
Q 012402 262 GNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTKEIYL 340 (464)
Q Consensus 262 dGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqGFtkeI~l 340 (464)
+++||++-.+ +-. -|.-+||++.+||-|+.-+|+.+|.+++.+ +|..|++.|.-+.-..||+-|||.+-..+
T Consensus 45 ~~~iiacGsi--aGn----vikcvAvs~s~qGeGl~lkl~TeLin~ay~-~g~~hLFiyTKp~~~~lFk~~GF~~i~~~ 116 (352)
T COG3053 45 NEEIIACGSI--AGN----VIKCVAVSESLQGEGLALKLVTELINLAYE-RGRTHLFIYTKPEYAALFKQCGFSEIASA 116 (352)
T ss_pred CCcEEEeccc--ccc----eeEEEEechhcccccHHHHHHHHHHHHHHH-cCCceEEEEechhHHHHHHhCCceEeecc
Confidence 4889872221 111 377799999999999999999999999998 99999999988778999999999874444
No 71
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=97.40 E-value=0.00039 Score=66.00 Aligned_cols=80 Identities=23% Similarity=0.283 Sum_probs=61.0
Q ss_pred EEEEEE-CCEEEEEEEEEEecCCceEE----EEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEcc--Ccc-chh
Q 012402 256 SVMVIR-GNVVVGGITYRPYVSQKFGE----IAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYA--DNN-AVG 327 (464)
Q Consensus 256 s~Vlik-dGkVIGGI~~R~f~~~~faE----IvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyA--Dn~-AIg 327 (464)
+++++. ++++||.|-+|......+.+ | -..|.|+.||||||++++..+.+.|++ +|+..++++. +|. .-.
T Consensus 70 ~y~~v~~d~~ivG~i~lRh~Ln~~ll~~gGHI-GY~VrPseR~KGYA~emLkl~L~~ar~-lgi~~Vlvtcd~dN~ASrk 147 (174)
T COG3981 70 TYWAVDEDGQIVGFINLRHQLNDFLLEEGGHI-GYSVRPSERRKGYAKEMLKLALEKARE-LGIKKVLVTCDKDNIASRK 147 (174)
T ss_pred eEEEEecCCcEEEEEEeeeecchHHHhcCCcc-cceeChhhhccCHHHHHHHHHHHHHHH-cCCCeEEEEeCCCCchhhH
Confidence 344444 69999999999855433322 3 478999999999999999999999998 9999877654 354 467
Q ss_pred hhhhcCCeEe
Q 012402 328 YFIKQGFTKE 337 (464)
Q Consensus 328 FYkKqGFtke 337 (464)
--+++|=..+
T Consensus 148 vI~~NGGile 157 (174)
T COG3981 148 VIEANGGILE 157 (174)
T ss_pred HHHhcCCEEe
Confidence 7888886544
No 72
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=97.27 E-value=0.001 Score=69.34 Aligned_cols=101 Identities=15% Similarity=0.199 Sum_probs=70.6
Q ss_pred HHHhhcCCCCcHHHHHHHhhcCCceEEEEEECCEEEEEEEEEEec---CCce---EEEEEEEeCCCccccCHHHHHHHHH
Q 012402 231 NIFARQLPNMPKEYIVRLVMDRSHKSVMVIRGNVVVGGITYRPYV---SQKF---GEIAFCAITADEQVKGYGTRLMNHL 304 (464)
Q Consensus 231 niFskQLPkMpkEYI~RLVfD~~h~s~VlikdGkVIGGI~~R~f~---~~~f---aEIvfIAVsps~QGKGyGS~LMnhL 304 (464)
+.|.+-+-.-...+..+++.-++ .+++..+.++++.+...+|. ..+. .-|..+|+.|+|||+|+-++||.|.
T Consensus 18 ~~~~k~~~~~~~~~f~kil~~~n--~~vi~~nqkl~s~L~i~~f~~~f~~q~l~t~GIa~Vas~P~~R~~G~~~~Ll~~s 95 (389)
T COG4552 18 YAFWKPLVPTDGAVFVKILAEPN--SYVIYMNQKLASRLHIPPFIFWFGNQVLPTAGIAGVASAPTYRRRGALRALLAHS 95 (389)
T ss_pred HHhcCccccchhhhhhhhccCCc--ceEEeehhhhhhcccccchheeeCCeeeeccceEEEEechhhccCcHHHHHHHHH
Confidence 34444443334555555544333 36666778888877755431 2222 3499999999999999999999999
Q ss_pred HHHHHhhCCCcEEEEccCccchhhhhhcCCeE
Q 012402 305 KQHARDVDGLTHFLTYADNNAVGYFIKQGFTK 336 (464)
Q Consensus 305 ke~Are~~Gi~~LLTyADn~AIgFYkKqGFtk 336 (464)
....++ +|+.....+. ...+||+|.||..
T Consensus 96 Lre~~~-kG~p~s~L~P--~s~~iYrKfGye~ 124 (389)
T COG4552 96 LREIAR-KGYPVSALHP--FSGGIYRKFGYEY 124 (389)
T ss_pred HHHHHH-cCCeeEEecc--CchhhHhhccccc
Confidence 999887 8988765552 3589999999965
No 73
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=96.79 E-value=0.0044 Score=54.05 Aligned_cols=62 Identities=18% Similarity=0.279 Sum_probs=49.0
Q ss_pred ceEEEEEECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEE
Q 012402 254 HKSVMVIRGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHF 317 (464)
Q Consensus 254 h~s~VlikdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~L 317 (464)
...+++-.+|.++|.+.+... ..+.+-|.--.|++.+||||+|++|+.++.++||+ .|.+.+
T Consensus 15 ~~~y~~~~~G~~~~e~~y~~~-~~~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~-~g~kii 76 (99)
T COG2388 15 NGRYVLTDEGEVIGEATYYDR-GENLIIIDHTYVPDELRGQGIAQKLVEKALEEARE-AGLKII 76 (99)
T ss_pred ceEEEEecCCcEEEEEEEecC-CCCEEEEecCcCCHHHcCCcHHHHHHHHHHHHHHH-cCCeEc
Confidence 344566678999998888654 33456677788999999999999999999999998 666543
No 74
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=96.33 E-value=0.057 Score=51.19 Aligned_cols=104 Identities=15% Similarity=0.197 Sum_probs=70.7
Q ss_pred hcCCceEE-EEEECCEEEEEEEEEEe----------c----------CCceEEEEEEEeCCCccc------cCHHHHHHH
Q 012402 250 MDRSHKSV-MVIRGNVVVGGITYRPY----------V----------SQKFGEIAFCAITADEQV------KGYGTRLMN 302 (464)
Q Consensus 250 fD~~h~s~-VlikdGkVIGGI~~R~f----------~----------~~~faEIvfIAVsps~QG------KGyGS~LMn 302 (464)
||...-.+ +...+|+|+|++-+.+. + .....|+..+||+++..+ .-+...|+.
T Consensus 40 yD~~~~~ylv~~~~g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~p~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~ 119 (182)
T PF00765_consen 40 YDDPDAVYLVALDDGRVVGCARLLPTTGPYMLSDVFPHLLPDGPAPRSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLL 119 (182)
T ss_dssp TGCTT-EEEEEEETTEEEEEEEEEETTS--HHHHCTGGGHTTS---SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHH
T ss_pred cCCCCCeEEEEEECCEEEEEeeeccCCCcchhhhHHHHHhCCCCCCCCCcceeeeEEEEcccccccccccccHHHHHHHH
Confidence 44443334 44568999998766541 1 136799999999998532 246789999
Q ss_pred HHHHHHHhhCCCcEEEEccCccchhhhhhcCCeEeeecccccccccccCCCCceeeeee
Q 012402 303 HLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTKEIYLEKDRWQGYIKDYDGGILMECK 361 (464)
Q Consensus 303 hLke~Are~~Gi~~LLTyADn~AIgFYkKqGFtkeI~lpk~iw~GyIKDYEgatLMEC~ 361 (464)
.+.++|.+ +|+.++++..+..-.++|++.||..+. .|--..+++..++-+.
T Consensus 120 ~~~e~a~~-~gi~~~v~V~~~~~~r~l~r~G~~~~~-------lG~~~~~~~~~~~a~~ 170 (182)
T PF00765_consen 120 GMVEFALS-NGIRHIVGVVDPAMERILRRAGWPVRR-------LGPPRSIGGERVVALL 170 (182)
T ss_dssp HHHHHHHC-TT-SEEEEEEEHHHHHHHHHCT-EEEE-------SSEEEEETTEEEEEEE
T ss_pred HHHHHHHH-CCCCEEEEEEChHHHHHHHHcCCceEE-------CCCCeeeCCeEEEEEE
Confidence 99999998 999999987777779999999998753 3433334455566654
No 75
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=96.33 E-value=0.083 Score=50.93 Aligned_cols=144 Identities=13% Similarity=0.145 Sum_probs=87.6
Q ss_pred EEEEecCCCchhhHHHHHHH----HHHHhhcCCCCcH--HHHHHHhhcCCceEEEEEE--CCEEEEEEEEEE--------
Q 012402 210 KFVCLSNDGIDEHMVWLIGL----KNIFARQLPNMPK--EYIVRLVMDRSHKSVMVIR--GNVVVGGITYRP-------- 273 (464)
Q Consensus 210 ~f~vv~Nd~~~~~liwL~~L----kniFskQLPkMpk--EYI~RLVfD~~h~s~Vlik--dGkVIGGI~~R~-------- 273 (464)
++++|+..+....--.+..+ ..+|..+|.--.. +=++.=-||...-.+++.. +|+|||++-+.+
T Consensus 2 ~~~~v~~~~~~~~~~~l~~~~rLR~~VF~~elgW~~~~~~g~E~D~yD~~~~~yll~~~~~g~vvG~~RLlptt~p~ml~ 81 (207)
T PRK13834 2 RILAISPDQYEREASLLKQMHRLRARVFGGRLGWDVSITDGEERDQFDDLKPTYILAISDSGRVAGCARLLPAIGPTMLA 81 (207)
T ss_pred eEEEEeCchhhcCHHHHHHHHHHHHHHhccccCCCCCCCCCcCccCCCCCCCEEEEEEeCCCeEEEEEecccCCCcchhh
Confidence 56777655432222223332 6777776532110 1112122455444444433 579999644321
Q ss_pred --ec----------CCceEEEEEEEeCCCccc-c--C----HHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcCC
Q 012402 274 --YV----------SQKFGEIAFCAITADEQV-K--G----YGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGF 334 (464)
Q Consensus 274 --f~----------~~~faEIvfIAVsps~QG-K--G----yGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqGF 334 (464)
|+ ....+|+..+||++.++. + + +...|+..+.+++.. +|++++++-.+..-...|++.||
T Consensus 82 ~~fp~l~~~~~~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~-~Gi~~~~~v~~~~~~r~l~r~G~ 160 (207)
T PRK13834 82 QVFPQLLPAGRLNAHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMA-NGYTEIVTATDLRFERILARAGW 160 (207)
T ss_pred hhcHHhcCCCCCCCCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHH-CCCCEEEEEECHHHHHHHHHcCC
Confidence 11 235799999999998532 2 2 567899999999998 99999987665555678999999
Q ss_pred eEeeecccccccccccCCCCceeeeee
Q 012402 335 TKEIYLEKDRWQGYIKDYDGGILMECK 361 (464)
Q Consensus 335 tkeI~lpk~iw~GyIKDYEgatLMEC~ 361 (464)
..+. .|--..+++...+-+.
T Consensus 161 ~~~~-------lG~~~~~g~~~~~a~~ 180 (207)
T PRK13834 161 PMQR-------LGEPKAIGNTMAVAGI 180 (207)
T ss_pred CeEE-------CCCCEEECCeEEEEEE
Confidence 7742 3554456666667665
No 76
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=96.22 E-value=0.052 Score=53.28 Aligned_cols=107 Identities=14% Similarity=0.186 Sum_probs=73.9
Q ss_pred HHHHhhcCCCC-cH---HHHHHHhhcCCceEEEEEE--CCEEEEEEEEEEe---------c-------------------
Q 012402 230 KNIFARQLPNM-PK---EYIVRLVMDRSHKSVMVIR--GNVVVGGITYRPY---------V------------------- 275 (464)
Q Consensus 230 kniFskQLPkM-pk---EYI~RLVfD~~h~s~Vlik--dGkVIGGI~~R~f---------~------------------- 275 (464)
..+|..++--. +. +-++.=-||.....+++.. +|++||++.+.+- +
T Consensus 27 ~~VFv~e~gw~~~~~~~~~~E~D~~D~~~~h~l~~~~~~g~vvG~~RLl~t~~~~p~~~~p~e~~~~~~~~~~~~~~~~~ 106 (241)
T TIGR03694 27 YQVYCEELGFEPPSDYPDGLETDEYDAHSVHSLLRHRRTGTFVGCVRLVLPNSSDPDQPFPFEKHCSHSLDGLFLDPRRL 106 (241)
T ss_pred HHHHHHhcCCCCCCCCCCCCcCCCCCCCCcEEEEEECCCCCEEEEEEEeccccccccccccHHHHhccccchhhcCcccc
Confidence 67777765321 11 2233333565544555554 4899997665431 1
Q ss_pred -CCceEEEEEEEeCCCcccc--------C--------------------HHHHHHHHHHHHHHhhCCCcEEEEccCccch
Q 012402 276 -SQKFGEIAFCAITADEQVK--------G--------------------YGTRLMNHLKQHARDVDGLTHFLTYADNNAV 326 (464)
Q Consensus 276 -~~~faEIvfIAVsps~QGK--------G--------------------yGS~LMnhLke~Are~~Gi~~LLTyADn~AI 326 (464)
....+|+..+||++++|++ | +...|+..+.+++.+ +|++++++-.+..-.
T Consensus 107 ~~~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~-~Gi~~~~~v~~~~l~ 185 (241)
T TIGR03694 107 PRSRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLGLIALSSA-NGITHWYAIMEPRLA 185 (241)
T ss_pred CCCceEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHHHHHHHHH-CCCcEEEEEeCHHHH
Confidence 1257899999999998874 2 446799999999998 999999887766677
Q ss_pred hhhhhcCCeEe
Q 012402 327 GYFIKQGFTKE 337 (464)
Q Consensus 327 gFYkKqGFtke 337 (464)
..|++.|+..+
T Consensus 186 r~l~r~G~~~~ 196 (241)
T TIGR03694 186 RLLSRFGIQFR 196 (241)
T ss_pred HHHHHhCCceE
Confidence 89999999764
No 77
>KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism]
Probab=95.95 E-value=0.018 Score=54.46 Aligned_cols=57 Identities=25% Similarity=0.234 Sum_probs=45.2
Q ss_pred EEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEE--ccCc-cchhhhhhcCCeEe
Q 012402 281 EIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLT--YADN-NAVGYFIKQGFTKE 337 (464)
Q Consensus 281 EIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLT--yADn-~AIgFYkKqGFtke 337 (464)
|+.-+.-.|.-||||||+..+..++.|+....++..+.. -.+| ..+.||+|.+|+..
T Consensus 109 E~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~lFkk~~f~q~ 168 (185)
T KOG4135|consen 109 EVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRLFKKFLFTQV 168 (185)
T ss_pred eEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHHHHHhhheee
Confidence 444466679999999999999999999998667766544 2344 58999999999873
No 78
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=95.60 E-value=0.18 Score=48.35 Aligned_cols=85 Identities=13% Similarity=0.154 Sum_probs=54.3
Q ss_pred hcC-CceEEEEEEC-CEEEEEEEEEEec------CCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEcc
Q 012402 250 MDR-SHKSVMVIRG-NVVVGGITYRPYV------SQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYA 321 (464)
Q Consensus 250 fD~-~h~s~Vlikd-GkVIGGI~~R~f~------~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyA 321 (464)
|+. -+..++++++ .+||++..+-.|. +.-+.-|-+.+++|+|||+|+++.+-..+++..+. .....+.+.
T Consensus 41 f~~~Y~l~~~~~KgT~~via~~~~~~~~~l~~~~d~pl~~~G~~w~~p~yRg~~~~kl~~~~~~~~~~~--~~~N~~~~~ 118 (181)
T PF06852_consen 41 FDDDYWLVLTCLKGTDRVIATVHLIRFDPLNPSPDKPLQFIGFFWIDPEYRGKGIMKLQDDICMDELDS--VDDNSVAQG 118 (181)
T ss_pred hccCeEEEEEEEcCCCcEEEEEEEEEeccCCCCCCCCeEEEeeeeeCCcccCcchHHHHHHHHHHHhcc--CCCceeeec
Confidence 444 3445555554 5798865543332 23477788999999999999996444444555543 333445555
Q ss_pred Cccchhhhhh-cCCeE
Q 012402 322 DNNAVGYFIK-QGFTK 336 (464)
Q Consensus 322 Dn~AIgFYkK-qGFtk 336 (464)
...+..||+| +||..
T Consensus 119 ~~~~~~~w~k~~G~~~ 134 (181)
T PF06852_consen 119 NVKMSNFWHKMFGFDD 134 (181)
T ss_pred CHHHHHHHHHHhCCCC
Confidence 5667778876 68766
No 79
>KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only]
Probab=95.42 E-value=0.014 Score=55.35 Aligned_cols=56 Identities=18% Similarity=0.186 Sum_probs=44.2
Q ss_pred EEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCc-EEEEccCccchhhhhhcCCeE
Q 012402 280 GEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLT-HFLTYADNNAVGYFIKQGFTK 336 (464)
Q Consensus 280 aEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~-~LLTyADn~AIgFYkKqGFtk 336 (464)
+.|..++|+|+||.||+|..|+..-++..-+ +.+. ....-+...-+.||++.||+.
T Consensus 102 i~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~-q~i~~r~~Li~h~pLvPFYEr~gFk~ 158 (190)
T KOG4144|consen 102 IHIHSLAIHPAFRKQGRAPILLWRYLQHLGS-QPIVRRAALICHDPLVPFYERFGFKA 158 (190)
T ss_pred eeEEEEEecHHHHhcCcchhHHHHHHHHhhc-CccccceeeeecCCccchhHhcCcee
Confidence 6788999999999999999999886666655 4554 333334456799999999987
No 80
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=95.04 E-value=0.022 Score=61.42 Aligned_cols=48 Identities=25% Similarity=0.511 Sum_probs=43.6
Q ss_pred CCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcCCeEe
Q 012402 289 ADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTKE 337 (464)
Q Consensus 289 ps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqGFtke 337 (464)
-.+|-+|||+.||.+++..|++ .+...|++.+.-.+-.||+|.||...
T Consensus 460 ~~~QH~G~G~~L~~~AE~ia~e-e~~~ki~viSgiG~ReYy~k~GY~~~ 507 (515)
T COG1243 460 DEWQHRGYGRELLEEAERIARE-EGAKKILVISGIGVREYYRKLGYELD 507 (515)
T ss_pred chhhcccHHHHHHHHHHHHHHh-hccccEEEEecccHHHHHHHhCcccc
Confidence 5689999999999999999998 77888888877889999999999984
No 81
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=94.85 E-value=0.21 Score=47.37 Aligned_cols=77 Identities=18% Similarity=0.202 Sum_probs=55.7
Q ss_pred cHHHHHHHhhcCCc---eEEEEEE--CCEEEEEEEEEEec------CCceEEEEEEEeCCCccccCHHHHHHHHHHHHHH
Q 012402 241 PKEYIVRLVMDRSH---KSVMVIR--GNVVVGGITYRPYV------SQKFGEIAFCAITADEQVKGYGTRLMNHLKQHAR 309 (464)
Q Consensus 241 pkEYI~RLVfD~~h---~s~Vlik--dGkVIGGI~~R~f~------~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Ar 309 (464)
++++|...+..|.+ ..+.+.. .+++||+|...+.. ....+||.|+||+...|.|++.-.|++.+...+.
T Consensus 61 S~efL~WaL~pPg~~~~whiGVR~~~~~kLvgfIsaip~~irv~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn 140 (162)
T PF01233_consen 61 SKEFLKWALKPPGWKKEWHIGVRVKSSKKLVGFISAIPATIRVRDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVN 140 (162)
T ss_dssp -HHHHHHHHTSTT--GGGEEEEEETTTTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHH
T ss_pred CHHHHhheeeCcCCccceEEEEEECCCCEEEEEEccceEEEEEeeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhh
Confidence 57888888777754 2444433 58999999865521 1345899999999999999999999999999998
Q ss_pred hhCCCcEEE
Q 012402 310 DVDGLTHFL 318 (464)
Q Consensus 310 e~~Gi~~LL 318 (464)
. .|+-+-+
T Consensus 141 ~-~gI~qAv 148 (162)
T PF01233_consen 141 L-QGIWQAV 148 (162)
T ss_dssp T-TT--EEE
T ss_pred h-cCceeee
Confidence 6 7877544
No 82
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=94.63 E-value=0.16 Score=44.18 Aligned_cols=31 Identities=16% Similarity=0.217 Sum_probs=28.2
Q ss_pred CceEEEEEEEeCCCccccCHHHHHHHHHHHH
Q 012402 277 QKFGEIAFCAITADEQVKGYGTRLMNHLKQH 307 (464)
Q Consensus 277 ~~faEIvfIAVsps~QGKGyGS~LMnhLke~ 307 (464)
..+..+..+||.++.||+|+|..|++.+++.
T Consensus 32 ~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d 62 (99)
T cd04264 32 NGVPYLDKFAVSSSAQGEGTSDALWRRLRRD 62 (99)
T ss_pred CCceEEEEEEEchhhhhcChHHHHHHHHHhh
Confidence 3678999999999999999999999998865
No 83
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=93.99 E-value=0.08 Score=45.65 Aligned_cols=69 Identities=19% Similarity=0.161 Sum_probs=54.2
Q ss_pred CCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEE-ccCc-cchhhhhhcCCeE
Q 012402 262 GNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLT-YADN-NAVGYFIKQGFTK 336 (464)
Q Consensus 262 dGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLT-yADn-~AIgFYkKqGFtk 336 (464)
+|.+|-=+.. .++.|+.--..-|+|||||+.++++.++.+++.+ +|+....- -.+| ...+..++.||..
T Consensus 7 eG~PVSW~lm-----dqtge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~-~g~P~Y~hv~~~N~~~~r~~~~lg~~~ 77 (89)
T PF08444_consen 7 EGNPVSWSLM-----DQTGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHK-LGFPFYGHVDEDNEASQRLSKSLGFIF 77 (89)
T ss_pred CCCEeEEEEe-----cccccccccccCHhHhcCCHHHHHHHHHHHHHHH-CCCCeEeehHhccHHHHHHHHHCCCee
Confidence 4666653332 3457888888999999999999999999999998 89986543 3334 5899999999986
No 84
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.88 E-value=0.31 Score=53.35 Aligned_cols=127 Identities=16% Similarity=0.179 Sum_probs=85.3
Q ss_pred cEEEEEecCCC-chhhHHHHHHHHHHHhhcCCCCcHHHHHHHhhcCCceEEEEEE-----CCEEEEEEEEEEecCCceEE
Q 012402 208 NLKFVCLSNDG-IDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIR-----GNVVVGGITYRPYVSQKFGE 281 (464)
Q Consensus 208 ~I~f~vv~Nd~-~~~~liwL~~LkniFskQLPkMpkEYI~RLVfD~~h~s~Vlik-----dGkVIGGI~~R~f~~~~faE 281 (464)
+|++++-.+|. .-....-|+.=-|-|-.--.+...+=+.+++.|++...|.+-. ++.+||.+.+.. ..+...
T Consensus 411 em~l~vs~~de~~i~RIsQLtqkTNQFnlTtkRy~e~dV~~~~~~~~~li~sv~l~DKfgDnGiigvviv~k--k~~~w~ 488 (574)
T COG3882 411 EMRLTVSKFDEVNIPRISQLTQKTNQFNLTTKRYNEEDVRQMQEDPNFLIFSVSLKDKFGDNGIIGVVIVEK--KESEWF 488 (574)
T ss_pred eEEEEEeeccccCcHHHHHHhhcccceeechhhhcHHHHHHHhhCCCeEEEEEEeccccccCceEEEEEEEe--cCCeEE
Confidence 45555656663 3333344444344444433445566677777777755444432 467999766654 235677
Q ss_pred EEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEcc-----CccchhhhhhcCCeEe
Q 012402 282 IAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYA-----DNNAVGYFIKQGFTKE 337 (464)
Q Consensus 282 IvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyA-----Dn~AIgFYkKqGFtke 337 (464)
|..++.+---=|+++-++||+.+++.|+. .|+..+-+|- +..-..||+.+||..+
T Consensus 489 IDt~lmSCRVlgRkvE~~l~~~~~e~A~~-~gi~tir~~Y~pt~kN~pv~~FyE~mgf~l~ 548 (574)
T COG3882 489 IDTFLMSCRVLGRKVEQRLMNSLEEQALS-EGINTIRGYYIPTEKNAPVSDFYERMGFKLK 548 (574)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcceeeeEecccccCCcHHHHHHHhccccc
Confidence 88888887778999999999999999998 9999776532 2246889999999953
No 85
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=93.57 E-value=0.32 Score=44.73 Aligned_cols=83 Identities=16% Similarity=0.098 Sum_probs=55.8
Q ss_pred cCCceEEEEEECCEEEEEEEEEE--ecCC-ceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEc-cCccch
Q 012402 251 DRSHKSVMVIRGNVVVGGITYRP--YVSQ-KFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTY-ADNNAV 326 (464)
Q Consensus 251 D~~h~s~VlikdGkVIGGI~~R~--f~~~-~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTy-ADn~AI 326 (464)
++....+.+.-++.+||++...- +... --.-|..+-|-..||++|+|++..+.+...++ |.-.+.+- .+.+|+
T Consensus 34 ~~~~~~~~~~~~~~~igf~l~L~~~~~~~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~~~---g~w~Va~i~EN~PA~ 110 (143)
T COG5628 34 DPVREAWLFRIGGLPVGFALVLDLAHSPTPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGSAW---GVWQVATVRENTPAR 110 (143)
T ss_pred CcccceeEEEECCceeeeeeeecccCCCCcccccchheEeeehhhccchhHHHHHHHHHHhh---ceEEEEEeccCChhH
Confidence 44455667777899999877532 1110 00124445666899999999999988887754 45555554 445799
Q ss_pred hhhhhcCCeE
Q 012402 327 GYFIKQGFTK 336 (464)
Q Consensus 327 gFYkKqGFtk 336 (464)
.||+|.-++.
T Consensus 111 ~fwK~~~~t~ 120 (143)
T COG5628 111 AFWKRVAETY 120 (143)
T ss_pred HHHHhhhccc
Confidence 9999977754
No 86
>KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription]
Probab=93.35 E-value=0.086 Score=55.67 Aligned_cols=48 Identities=25% Similarity=0.421 Sum_probs=41.5
Q ss_pred CccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcCCeEe
Q 012402 290 DEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTKE 337 (464)
Q Consensus 290 s~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqGFtke 337 (464)
.||-||||+.||+.++..|++.+|-..+-+-+....-.||+|.||+.+
T Consensus 498 KfQHQG~GtLLmeEAERIAr~EHgS~KiavISGVGtR~YY~klGY~Ld 545 (554)
T KOG2535|consen 498 KFQHQGFGTLLMEEAERIAREEHGSGKIAVISGVGTRNYYRKLGYELD 545 (554)
T ss_pred hhhhcchhhHHHHHHHHHHHHhcCCCceEEEeccchHHHHHhhCeeec
Confidence 599999999999999999998788777766655667889999999985
No 87
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.18 E-value=1.4 Score=43.52 Aligned_cols=122 Identities=15% Similarity=0.146 Sum_probs=82.4
Q ss_pred HHHHhhcCC----CCcHHHHHHHhhcCCceEEEEE--ECCEEEEEEEEEE----------ec----------CCceEEEE
Q 012402 230 KNIFARQLP----NMPKEYIVRLVMDRSHKSVMVI--RGNVVVGGITYRP----------YV----------SQKFGEIA 283 (464)
Q Consensus 230 kniFskQLP----kMpkEYI~RLVfD~~h~s~Vli--kdGkVIGGI~~R~----------f~----------~~~faEIv 283 (464)
+.+|.++|- .-+. ++.=-||..+-.+++. .+|+|+|+.-+.+ |+ ..++.|..
T Consensus 25 ~~vF~erL~W~v~~~~g--~E~DqyD~~~t~Yll~~~~~g~I~G~~RlLptt~P~mL~~vF~~Ll~~~~~P~~p~vwEsS 102 (209)
T COG3916 25 YQVFKERLGWDVVCIDG--FEIDQYDNLDTVYLLALTSDGRIVGCVRLLPTTGPYMLTDVFPALLEGGPPPSSPGVWESS 102 (209)
T ss_pred HHHHHHhcCCceeccCC--ccccccCCCCceEEEEEcCCCcEEEEEEeccCCCcchhhhhhHHHhcCCCCCCCCCeEEEe
Confidence 677777742 1111 2222245555445555 3789999655432 10 12779999
Q ss_pred EEEeCC--CccccC----HHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcCCeEeeecccccccccccCCCCcee
Q 012402 284 FCAITA--DEQVKG----YGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTKEIYLEKDRWQGYIKDYDGGIL 357 (464)
Q Consensus 284 fIAVsp--s~QGKG----yGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqGFtkeI~lpk~iw~GyIKDYEgatL 357 (464)
.+||+. .-+..| ++..||.-+.+++++ .|+++|+|-.+..=...+++.||..+. .|.-.-+.+..+
T Consensus 103 RF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~~-~G~~~IvtVt~~~meril~r~Gw~~~r-------iG~~~~ig~~~~ 174 (209)
T COG3916 103 RFAVDKPSARRAAGGVSPAAYELFAGMIEYALA-RGITGIVTVTDTGMERILRRAGWPLTR-------IGPPLTIGNERA 174 (209)
T ss_pred eeeeccccchhhcCCccHHHHHHHHHHHHHHHH-cCCceEEEEEchHHHHHHHHcCCCeEE-------cCCceeeCCeeE
Confidence 999997 333332 477899999999998 999999998888889999999997742 466555666667
Q ss_pred eeee
Q 012402 358 MECK 361 (464)
Q Consensus 358 MEC~ 361 (464)
+-|.
T Consensus 175 VA~~ 178 (209)
T COG3916 175 VALL 178 (209)
T ss_pred EEEE
Confidence 7765
No 88
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=92.97 E-value=0.65 Score=40.54 Aligned_cols=31 Identities=19% Similarity=0.250 Sum_probs=28.1
Q ss_pred ceEEEEEEEeCCCccccCHHHHHHHHHHHHH
Q 012402 278 KFGEIAFCAITADEQVKGYGTRLMNHLKQHA 308 (464)
Q Consensus 278 ~faEIvfIAVsps~QGKGyGS~LMnhLke~A 308 (464)
.+..+..+||.++.||+|+|..|++.+++..
T Consensus 33 ~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~ 63 (99)
T cd04265 33 GVPYLDKFAVSSSAQGEGTGEALWRRLRRDF 63 (99)
T ss_pred CceEEEEEEEchhhhhcChHHHHHHHHHhhC
Confidence 6788999999999999999999999988663
No 89
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=92.68 E-value=3.5 Score=41.50 Aligned_cols=100 Identities=13% Similarity=0.100 Sum_probs=66.7
Q ss_pred hcCCCCcHHHHHHHhh--cCCceEEEEE-ECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhh
Q 012402 235 RQLPNMPKEYIVRLVM--DRSHKSVMVI-RGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDV 311 (464)
Q Consensus 235 kQLPkMpkEYI~RLVf--D~~h~s~Vli-kdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~ 311 (464)
...|-.+++|+.+++- ..+..-+++. .+|++||++++..+ .+.+.....+.+++++..+-+..|+-+++++|++
T Consensus 174 ~g~p~~~~~~f~~l~~~~~~~~~l~~a~~~~g~~va~~l~~~~--~~~~~~~~~g~~~~~~~~~~~~lL~w~~i~~a~~- 250 (330)
T TIGR03019 174 LGTPVFSRRYFRLLKDVFGEDCEVLTVRLGDGVVASAVLSFYF--RDEVLPYYAGGLREARDVAANDLMYWELMRRACE- 250 (330)
T ss_pred CCCCCCCHHHHHHHHHhcccCEEEEEEEeCCCCEEEEEEEEEe--CCEEEEEeccChHHHHhhChHHHHHHHHHHHHHH-
Confidence 3467778999988753 2222223344 47889987554333 3334444667788899899999999999999998
Q ss_pred CCCcEEEE-ccC--ccchhhhhhcCCeEe
Q 012402 312 DGLTHFLT-YAD--NNAVGYFIKQGFTKE 337 (464)
Q Consensus 312 ~Gi~~LLT-yAD--n~AIgFYkKqGFtke 337 (464)
+|+..+-- .++ ..-..|-++.||+..
T Consensus 251 ~G~~~fDfG~s~~~~G~~~FK~~~G~~~~ 279 (330)
T TIGR03019 251 RGLRVFDFGRSKRGTGPFKFKKNWGFEPQ 279 (330)
T ss_pred CCCcEEEcCCCCCCCccHHHHhcCCCeec
Confidence 89987643 222 134456666799874
No 90
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=92.37 E-value=0.58 Score=45.83 Aligned_cols=65 Identities=18% Similarity=0.338 Sum_probs=52.6
Q ss_pred cCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcCCeEeeecccccccccccCCCCceeeeeecCCC
Q 012402 294 KGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTKEIYLEKDRWQGYIKDYDGGILMECKIDPK 365 (464)
Q Consensus 294 KGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqGFtkeI~lpk~iw~GyIKDYEgatLMEC~L~Pk 365 (464)
.|-...|+..+.+.|++ .|+..++.+....+..+|+++||..+..+| ||... +++..|...+.+.
T Consensus 20 ~~~~~~~~~~~~~~a~~-~~~~ki~~~~~~~~~~~~~~~g~~~e~~i~-----~~f~g-~~~~~~~~~~~~~ 84 (266)
T TIGR03827 20 GNDVEALIPDLDALAKK-EGYTKIIAKVPGSDKPLFEERGYLEEAKIP-----GYFNG-HDAYFMSKYLDED 84 (266)
T ss_pred CccHHHHHHHHHHHHHH-cCCcEEEEEccHHHHHHHHHCCCeEEEecc-----cccCC-CceEEEEEcCchH
Confidence 45588999999999998 999999999888889999999999986664 34333 6788888765553
No 91
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=91.95 E-value=0.21 Score=41.38 Aligned_cols=31 Identities=19% Similarity=0.265 Sum_probs=26.7
Q ss_pred eEEEEEEEeCCCccccCHHHHHHHHHHHHHH
Q 012402 279 FGEIAFCAITADEQVKGYGTRLMNHLKQHAR 309 (464)
Q Consensus 279 faEIvfIAVsps~QGKGyGS~LMnhLke~Ar 309 (464)
.+-|..|+|+|.+|+|||+++||+.+.+...
T Consensus 5 ~~GI~RIWV~~~~RR~GIAt~Lld~ar~~~i 35 (70)
T PF13880_consen 5 VCGISRIWVSPSHRRKGIATRLLDAARENFI 35 (70)
T ss_pred EEEeEEEEeChhhhhhhHHHHHHHHHHHhcc
Confidence 3568889999999999999999999877643
No 92
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=90.75 E-value=1.4 Score=40.05 Aligned_cols=50 Identities=18% Similarity=0.316 Sum_probs=32.3
Q ss_pred EEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhc
Q 012402 282 IAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQ 332 (464)
Q Consensus 282 IvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKq 332 (464)
|..+.|+++.|++|+|++|.+++.+.-.- .....-+..-+..-++|.+|+
T Consensus 49 vLDFyVhes~QR~G~Gk~LF~~ML~~e~~-~p~~~a~DrPS~Kll~Fl~Kh 98 (120)
T PF05301_consen 49 VLDFYVHESRQRRGYGKRLFDHMLQEENV-SPHQLAIDRPSPKLLSFLKKH 98 (120)
T ss_pred eeeEEEEeceeccCchHHHHHHHHHHcCC-CcccceecCCcHHHHHHHHHh
Confidence 57788999999999999999998766221 111111222223356777764
No 93
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=89.38 E-value=3.6 Score=40.04 Aligned_cols=92 Identities=16% Similarity=0.175 Sum_probs=52.2
Q ss_pred cCcEEEEEecCCC---chhhHHHHHHHHHHHhhcCCCCcHHHHHHHhhcCCceEEEEE-E--C-C-EEEEEEEEEEecCC
Q 012402 206 AGNLKFVCLSNDG---IDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVI-R--G-N-VVVGGITYRPYVSQ 277 (464)
Q Consensus 206 ~G~I~f~vv~Nd~---~~~~liwL~~LkniFskQLPkMpkEYI~RLVfD~~h~s~Vli-k--d-G-kVIGGI~~R~f~~~ 277 (464)
+|.|.|..|.... .-|+|-+|.- -..... -+.||-....|.++ . + | .+||+-.=.. ...
T Consensus 12 ~~~~sifEVdG~~~~~yCqnLcLlaK--LFLd~K----------tlyydv~~F~FYVl~e~d~~g~h~vGyFSKEk-~s~ 78 (188)
T PF01853_consen 12 DDNISIFEVDGAKHKLYCQNLCLLAK--LFLDHK----------TLYYDVDPFLFYVLTEKDDDGFHIVGYFSKEK-ESW 78 (188)
T ss_dssp ETTEEEEEEETTTSHHHHHHHHHHHH--TT-SSG----------CCTT-STTEEEEEEEEEETTEEEEEEEEEEES-S-T
T ss_pred CCCeEEEEEECCcCchHHHHHHHHHH--HHhhCe----------EEEeecCceEEEEEEEecCccceeEEEEEEEe-ccc
Confidence 4668887776554 3355555552 111111 12345555554444 2 2 2 5788644222 222
Q ss_pred ceEEEEEEEeCCCccccCHHHHHHHHHHHHHHh
Q 012402 278 KFGEIAFCAITADEQVKGYGTRLMNHLKQHARD 310 (464)
Q Consensus 278 ~faEIvfIAVsps~QGKGyGS~LMnhLke~Are 310 (464)
.---+.=|.|-|.||+||||+.|++.--+.++.
T Consensus 79 ~~~NLsCIl~lP~yQrkGyG~~LI~fSY~LSr~ 111 (188)
T PF01853_consen 79 DNNNLSCILTLPPYQRKGYGRFLIDFSYELSRR 111 (188)
T ss_dssp T-EEESEEEE-GGGTTSSHHHHHHHHHHHHHHH
T ss_pred CCeeEeehhhcchhhhcchhhhhhhhHHHHhhc
Confidence 223455588999999999999999998888875
No 94
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=86.82 E-value=2.4 Score=39.76 Aligned_cols=60 Identities=17% Similarity=0.203 Sum_probs=50.7
Q ss_pred CceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEE--ccC--cc-chhhhhhcCCeEe
Q 012402 277 QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLT--YAD--NN-AVGYFIKQGFTKE 337 (464)
Q Consensus 277 ~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLT--yAD--n~-AIgFYkKqGFtke 337 (464)
.+|+.|..+.|....||+|.|+.|..-+.++|+. .|..++.+ ..| |. +..|--..||.+.
T Consensus 82 e~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~-agy~~~tCEVn~DppnpasdaFHaalGF~eV 146 (167)
T COG3818 82 ENFFYVDRVVVASRARGRGVARALYADLFSYAEL-AGYPYLTCEVNLDPPNPASDAFHAALGFHEV 146 (167)
T ss_pred CceEEEEEEEEEecccccchHHHHHHHHHHHHHh-cCCceEEEEecCCCCChHHHHHhhhcCceEc
Confidence 5788999999999999999999999999999997 78887755 444 33 6778889999874
No 95
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=84.98 E-value=9.2 Score=39.55 Aligned_cols=94 Identities=20% Similarity=0.235 Sum_probs=56.3
Q ss_pred cCcEEEEEecCCC---chhhHHHHHHHHHHHhhcCCCCcHHHHHHHhhcCCceEEEEE-E---CC-EEEEEEEEEEecCC
Q 012402 206 AGNLKFVCLSNDG---IDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVI-R---GN-VVVGGITYRPYVSQ 277 (464)
Q Consensus 206 ~G~I~f~vv~Nd~---~~~~liwL~~LkniFskQLPkMpkEYI~RLVfD~~h~s~Vli-k---dG-kVIGGI~~R~f~~~ 277 (464)
+|.|.|..|.... .-|+|-+|.- +|-..- -+.||-...-|.++ + .| .+||+-.=.. ...
T Consensus 87 ~~~~sifEVDG~~~~~yCqnLcLlaK---LFLdhK---------tlyyDV~~FlFYVl~e~d~~g~h~vGYFSKEK-~s~ 153 (290)
T PLN03238 87 EGPLSVFEVDGKKAKVYCQNLCLLAK---LFLDHK---------TLYYDVDPFLFYVMTEVDDHGSHIVGYFSKEK-VSA 153 (290)
T ss_pred CCcEEEEEEeCCcchhHHHHHHHHHH---HhhcCc---------cccccccceEEEEEEEecCCCcEEEEEeceec-ccc
Confidence 6778888886554 4466666653 222221 13345555544444 2 23 6888543221 111
Q ss_pred ceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCC
Q 012402 278 KFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDG 313 (464)
Q Consensus 278 ~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~G 313 (464)
..--+.=|.|.|.||+||||+.||+.-=+..+. .|
T Consensus 154 ~~nNLaCIltLPpyQrkGyG~~LI~fSYeLSr~-Eg 188 (290)
T PLN03238 154 EDYNLACILTLPPYQRKGYGKFLISFAYELSKR-EG 188 (290)
T ss_pred CCCcEEEEEecChhhhccHhHhHHHHHhHHhhc-cC
Confidence 112355578999999999999999998888875 44
No 96
>KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=83.66 E-value=0.89 Score=51.91 Aligned_cols=30 Identities=27% Similarity=0.369 Sum_probs=27.7
Q ss_pred EEEEEEEeCCCccccCHHHHHHHHHHHHHH
Q 012402 280 GEIAFCAITADEQVKGYGTRLMNHLKQHAR 309 (464)
Q Consensus 280 aEIvfIAVsps~QGKGyGS~LMnhLke~Ar 309 (464)
+-|+.|||+|+||+.|||++-++-+.+|..
T Consensus 615 aRIVRIAvhP~y~~MGYGsrAvqLL~~y~e 644 (1011)
T KOG2036|consen 615 ARIVRIAVHPEYQKMGYGSRAVQLLTDYFE 644 (1011)
T ss_pred ceEEEEEeccchhccCccHHHHHHHHHHHh
Confidence 569999999999999999999999998874
No 97
>PLN03239 histone acetyltransferase; Provisional
Probab=83.39 E-value=7.3 Score=41.22 Aligned_cols=92 Identities=17% Similarity=0.183 Sum_probs=54.4
Q ss_pred cCcEEEEEecCCC---chhhHHHHHHHHHHHhhcCCCCcHHHHHHHhhcCCceEEEEE-E---CC-EEEEEEEEEEecCC
Q 012402 206 AGNLKFVCLSNDG---IDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVI-R---GN-VVVGGITYRPYVSQ 277 (464)
Q Consensus 206 ~G~I~f~vv~Nd~---~~~~liwL~~LkniFskQLPkMpkEYI~RLVfD~~h~s~Vli-k---dG-kVIGGI~~R~f~~~ 277 (464)
.|.|.|..|.... --|+|-+|.- +|-..- -+.||-....|.++ . .| .+||+-.=.. ...
T Consensus 145 ~~~~sifEVDG~~~~~yCQnLCLlaK---LFLdhK---------tlyyDV~~FlFYVl~e~D~~g~h~vGYFSKEK-~s~ 211 (351)
T PLN03239 145 CGDLAMFEVDGFEERIYCQNLCYIAK---LFLDHK---------TLYFDVDPFLFYVLCEVDERGFHPVGYYSKEK-YSD 211 (351)
T ss_pred eCCEEEEEEeCccchHHHHHHHHHHH---HhhcCc---------ceeccccceEEEEEEEecCCceEEEEEeeecc-cCC
Confidence 4678888776554 3456665553 222220 13345555554444 2 23 6788543211 111
Q ss_pred ceEEEEEEEeCCCccccCHHHHHHHHHHHHHHh
Q 012402 278 KFGEIAFCAITADEQVKGYGTRLMNHLKQHARD 310 (464)
Q Consensus 278 ~faEIvfIAVsps~QGKGyGS~LMnhLke~Are 310 (464)
.---+.=|.|.|.||+||||+.||+.-=+..+.
T Consensus 212 ~~~NLaCIltLPpyQrkGyG~lLI~fSYeLSr~ 244 (351)
T PLN03239 212 VGYNLACILTFPAHQRKGYGRFLIAFSYELSKK 244 (351)
T ss_pred CCCceEEEEecChhhhcchhhhhHhhhhHhhhh
Confidence 112355578999999999999999998888875
No 98
>KOG2747 consensus Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=82.91 E-value=3.1 Score=44.50 Aligned_cols=98 Identities=17% Similarity=0.143 Sum_probs=53.9
Q ss_pred HHHHHhcCcEEEEEecCCC---chhhHHHHHHHHHHHhhcCCCCcHHHHHHHhhcCCceEEEEEECCE---EEEEEEEEE
Q 012402 200 LKREEEAGNLKFVCLSNDG---IDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRGNV---VVGGITYRP 273 (464)
Q Consensus 200 a~~eE~~G~I~f~vv~Nd~---~~~~liwL~~LkniFskQLPkMpkEYI~RLVfD~~h~s~VlikdGk---VIGGI~~R~ 273 (464)
...-=|+|.|.|..|.... .-|+|=+|.- -+..+. -|-||-..+-|.++-+.. .||+-. +.
T Consensus 188 G~EIYR~~~iSvfEVDG~~~k~YCQnLCLlaK--LFLdhK----------TLYyDvdpFlFYVlte~d~~G~VGYFS-KE 254 (396)
T KOG2747|consen 188 GNEIYRKGNISVFEVDGRKQKLYCQNLCLLAK--LFLDHK----------TLYYDVDPFLFYVLTECDSYGCVGYFS-KE 254 (396)
T ss_pred cceeeecCCEEEEEecCcchhHHHHHHHHHHH--HHhcCc----------eeEEeccceEEEEEEecCCcceeeeec-cc
Confidence 3344578999999997664 3455555552 111111 133455555444443222 344322 11
Q ss_pred ecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHh
Q 012402 274 YVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARD 310 (464)
Q Consensus 274 f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are 310 (464)
.....-.-+.=|-|.|-||+||||+.|+++==+.-|.
T Consensus 255 K~s~~~yNlaCILtLPpyQRkGYGklLIdFSYeLSr~ 291 (396)
T KOG2747|consen 255 KESSENYNLACILTLPPYQRKGYGKLLIDFSYELSRR 291 (396)
T ss_pred cccccccceeeeeecChhhhcccchhhhhhhhhhhcc
Confidence 1111111255567899999999999999986666543
No 99
>PTZ00064 histone acetyltransferase; Provisional
Probab=82.41 E-value=7.8 Score=42.94 Aligned_cols=94 Identities=19% Similarity=0.221 Sum_probs=55.7
Q ss_pred cCcEEEEEecCCC---chhhHHHHHHHHHHHhhcCCCCcHHHHHHHhhcCCceEEEEE-E-C--C-EEEEEEEEEEecCC
Q 012402 206 AGNLKFVCLSNDG---IDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVI-R-G--N-VVVGGITYRPYVSQ 277 (464)
Q Consensus 206 ~G~I~f~vv~Nd~---~~~~liwL~~LkniFskQLPkMpkEYI~RLVfD~~h~s~Vli-k-d--G-kVIGGI~~R~f~~~ 277 (464)
+|.|.|..|.... .-|+|-+|.- +|-..- -+.||-..+-|.++ + + | .+||+-.=.. ...
T Consensus 316 ~~~iSifEVDG~~~klYCQNLCLLAK---LFLDhK---------TLYyDVdpFlFYVLtE~D~~G~HiVGYFSKEK-~S~ 382 (552)
T PTZ00064 316 KDNISVFEIDGALTRGYAENLCYLAK---LFLDHK---------TLQYDVEPFLFYIVTEVDEEGCHIVGYFSKEK-VSL 382 (552)
T ss_pred eCCEEEEEEeCccchhHHHHHHHHHH---HhccCc---------cccccccceEEEEEEEecCCCcEEEEEecccc-cCc
Confidence 4677777776553 4466666653 222221 13345555544444 2 2 3 6888543211 111
Q ss_pred ceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCC
Q 012402 278 KFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDG 313 (464)
Q Consensus 278 ~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~G 313 (464)
.---+.=|.|.|.||+||||+.||+.--+..+. .|
T Consensus 383 ~~nNLACILtLPpyQRKGYGklLIdfSYeLSrr-Eg 417 (552)
T PTZ00064 383 LHYNLACILTLPCYQRKGYGKLLVDLSYKLSLK-EG 417 (552)
T ss_pred ccCceEEEEecchhhhcchhhhhhhhhhhhhhh-cC
Confidence 112355578999999999999999998888875 44
No 100
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=82.03 E-value=60 Score=32.67 Aligned_cols=116 Identities=11% Similarity=0.055 Sum_probs=79.1
Q ss_pred HHHHHhcCcEEEEEecCCCchhhHHHHHHHHHHHhhc--CCCCcHHHHHHHhhcCCceEEEEE--ECCEEEEEEEEEEec
Q 012402 200 LKREEEAGNLKFVCLSNDGIDEHMVWLIGLKNIFARQ--LPNMPKEYIVRLVMDRSHKSVMVI--RGNVVVGGITYRPYV 275 (464)
Q Consensus 200 a~~eE~~G~I~f~vv~Nd~~~~~liwL~~LkniFskQ--LPkMpkEYI~RLVfD~~h~s~Vli--kdGkVIGGI~~R~f~ 275 (464)
-|.--++..|++++....-+++...+...+.+.-... ...|..++-.+.+.+....+..+. .+|++||..+.-..+
T Consensus 86 rR~lkrn~dl~v~~~~~~~~~E~~~Ly~rY~~~rH~dg~m~~~~~~~y~~Fl~~~~~~t~~~ey~~~g~LiaVav~D~l~ 165 (240)
T PRK01305 86 RRVLKRNADLVVRVLPPEFTEEHYALYRRYLRARHADGGMDPPSRDQYAQFLEDSWVNTRFIEFRGDGKLVAVAVTDVLD 165 (240)
T ss_pred HHHHhhccCeEEEEcCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCcEEEEEEeCCeEEEEEEEeccC
Confidence 3444467778888888776777777666664444433 223455655666665544444433 479999976665543
Q ss_pred CCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEE
Q 012402 276 SQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFL 318 (464)
Q Consensus 276 ~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LL 318 (464)
+ + +--+.+.-+|++-..++|+..+-.-+++|++ .|..++.
T Consensus 166 d-~-lSAVY~FyDPd~~~~SLG~~~iL~qI~~ak~-~gl~y~Y 205 (240)
T PRK01305 166 D-G-LSAVYTFYDPDEEHRSLGTFAILWQIELAKR-LGLPYVY 205 (240)
T ss_pred C-c-eeeEEEeeCCCccccCCHHHHHHHHHHHHHH-cCCCeEe
Confidence 3 3 4455777899999999999999999999998 8887653
No 101
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=77.38 E-value=8.3 Score=42.05 Aligned_cols=89 Identities=18% Similarity=0.189 Sum_probs=51.8
Q ss_pred EEEEEecCCC---chhhHHHHHHHHHHHhhcCCCCcHHHHHHHhhcCCceEEEEE-E---CC-EEEEEEEEEEecCCceE
Q 012402 209 LKFVCLSNDG---IDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVI-R---GN-VVVGGITYRPYVSQKFG 280 (464)
Q Consensus 209 I~f~vv~Nd~---~~~~liwL~~LkniFskQLPkMpkEYI~RLVfD~~h~s~Vli-k---dG-kVIGGI~~R~f~~~~fa 280 (464)
|.|..|.... .-|+|-+|.- +|-..- -+.||-..+-|.++ + .| .+||+-.=.. ....-.
T Consensus 241 ~si~EvDG~~~~~yCqnLcLlaK---LFLdhK---------tlyydV~~FlFYvl~e~d~~g~h~vGyFSKEk-~s~~~~ 307 (450)
T PLN00104 241 LSMFEVDGKKNKVYCQNLCYLAK---LFLDHK---------TLYYDVDLFLFYVLCECDDRGCHMVGYFSKEK-HSEEDY 307 (450)
T ss_pred EEEEEEeCCcchhHHHHHHHHHH---HhhcCc---------ceeccccceEEEEEEEecCCCcEEEEEecccc-cCcCCC
Confidence 7777665443 4456666553 222220 13345555544444 2 23 7888544211 111112
Q ss_pred EEEEEEeCCCccccCHHHHHHHHHHHHHHh
Q 012402 281 EIAFCAITADEQVKGYGTRLMNHLKQHARD 310 (464)
Q Consensus 281 EIvfIAVsps~QGKGyGS~LMnhLke~Are 310 (464)
-+.=|.|.|.||+||||+.||+.--+..+.
T Consensus 308 NLaCIltlP~yQrkGyG~~LI~~SYeLSr~ 337 (450)
T PLN00104 308 NLACILTLPPYQRKGYGKFLIAFSYELSKR 337 (450)
T ss_pred ceEEEEecchhhhcchhheehhheehhhhc
Confidence 355578999999999999999998888775
No 102
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=74.66 E-value=8 Score=41.33 Aligned_cols=53 Identities=19% Similarity=0.244 Sum_probs=41.0
Q ss_pred CCEEEEEEEEEEec------CCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCc
Q 012402 262 GNVVVGGITYRPYV------SQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLT 315 (464)
Q Consensus 262 dGkVIGGI~~R~f~------~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~ 315 (464)
.+++||+|+..+.. .-..+||.|+||+...|+|++.=-|+..+-..+.- .||-
T Consensus 144 s~kLVaFIsaiP~~irvrdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRRvnl-~gIf 202 (421)
T KOG2779|consen 144 SKKLVAFISAIPATIRVRDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRRVNL-EGIF 202 (421)
T ss_pred CCceEEEEeccccEEEEccceeeeeeEEEEEEehhhhccccccHHHHHHHHHhhh-hhhh
Confidence 57999999975521 12458999999999999999999999988766653 4443
No 103
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=73.32 E-value=20 Score=37.76 Aligned_cols=29 Identities=31% Similarity=0.621 Sum_probs=26.3
Q ss_pred cchhhhhhcCCeEeeecccccccccccCCCCceeeeee
Q 012402 324 NAVGYFIKQGFTKEIYLEKDRWQGYIKDYDGGILMECK 361 (464)
Q Consensus 324 ~AIgFYkKqGFtkeI~lpk~iw~GyIKDYEgatLMEC~ 361 (464)
.|..+-++-||.. .|||+=+++|+.|+|.
T Consensus 232 pA~~lLe~EGF~~---------~~yVDIFDgGPtlea~ 260 (336)
T TIGR03244 232 PALAMLESEGFRY---------QGYVDIFDAGPTLEAE 260 (336)
T ss_pred HHHHHHHHcCCcc---------CCceeccCCCceEEEE
Confidence 4888999999987 5999999999999997
No 104
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=71.90 E-value=7.9 Score=32.80 Aligned_cols=53 Identities=17% Similarity=0.175 Sum_probs=36.4
Q ss_pred hhcCCceEEEEEECCE-EEEEEEEEEe----------------------cCCceEEEEEEEeCCCccccCHHHHHH
Q 012402 249 VMDRSHKSVMVIRGNV-VVGGITYRPY----------------------VSQKFGEIAFCAITADEQVKGYGTRLM 301 (464)
Q Consensus 249 VfD~~h~s~VlikdGk-VIGGI~~R~f----------------------~~~~faEIvfIAVsps~QGKGyGS~LM 301 (464)
-||.....+++..++. +||++-+... .....+||..+||+++||+...-..|+
T Consensus 25 ~fD~~~~h~lv~~~~~~~VGt~Rl~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 25 EFDEHSVHLLVRDKNTEVVGTVRLILPSPAGPLEGFYSESEFDLDPLLPLPRRVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred CCCCCccEEEEEECCCCEEEEEEeeccccccccccCCchhhcCcchhhccCCcEEEeehheECHhHCCChHHHHHh
Confidence 3566666677766555 9996543210 013668999999999999988776664
No 105
>PRK10456 arginine succinyltransferase; Provisional
Probab=70.43 E-value=24 Score=37.31 Aligned_cols=29 Identities=38% Similarity=0.716 Sum_probs=26.4
Q ss_pred cchhhhhhcCCeEeeecccccccccccCCCCceeeeee
Q 012402 324 NAVGYFIKQGFTKEIYLEKDRWQGYIKDYDGGILMECK 361 (464)
Q Consensus 324 ~AIgFYkKqGFtkeI~lpk~iw~GyIKDYEgatLMEC~ 361 (464)
.|..+-++-||.. .|||+=+++|+.|+|.
T Consensus 234 pA~~lLe~EGF~~---------~~yVDIFDgGP~lea~ 262 (344)
T PRK10456 234 PARAVLEKEGFRY---------RNYIDIFDGGPTLECD 262 (344)
T ss_pred HHHHHHHHcCCcc---------CCceeccCCCceEEEE
Confidence 4889999999987 5999999999999997
No 106
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=65.97 E-value=80 Score=32.28 Aligned_cols=109 Identities=16% Similarity=0.085 Sum_probs=68.7
Q ss_pred HHHHHHHHHhhc-CCCCcHHHHHHHhhcCCceEEEEEE-CCEEEEEEEEEE-ecCCc-eEEEEEEEeCCCccccCHHHHH
Q 012402 225 WLIGLKNIFARQ-LPNMPKEYIVRLVMDRSHKSVMVIR-GNVVVGGITYRP-YVSQK-FGEIAFCAITADEQVKGYGTRL 300 (464)
Q Consensus 225 wL~~LkniFskQ-LPkMpkEYI~RLVfD~~h~s~Vlik-dGkVIGGI~~R~-f~~~~-faEIvfIAVsps~QGKGyGS~L 300 (464)
.+.--+..|..+ --..|+..|.-+.+... .-+..+. +|++||.....+ +-.+. +..-...+|.|++++.|+|-.|
T Consensus 17 ~~dV~~~aWg~~d~~~~~~d~i~al~~~GG-lvlgAf~~dg~lVGls~G~pg~r~g~~y~ySH~~gV~e~~k~sglg~aL 95 (266)
T COG3375 17 AEDVQASAWGSEDRDGAPADTIRALRYHGG-LVLGAFSADGRLVGLSYGYPGGRGGSLYLYSHMLGVREEVKGSGLGVAL 95 (266)
T ss_pred HHHHHHHHhCccccccchHHHHHHHHhcCC-eEEEEEcCCCcEEEEEeccCCcCCCceeeeeeehhccccccccchhhhh
Confidence 333334445444 23346777775554333 3344444 569999766555 21222 4566779999999999999999
Q ss_pred HHHHHHHHHhhCCCcEE-EEccCccchh---hhhhcCCe
Q 012402 301 MNHLKQHARDVDGLTHF-LTYADNNAVG---YFIKQGFT 335 (464)
Q Consensus 301 MnhLke~Are~~Gi~~L-LTyADn~AIg---FYkKqGFt 335 (464)
=..=-+.++. +|++.+ +||.-.+|+. =+-|.|-.
T Consensus 96 K~~Qre~a~~-~G~tli~WTfDPl~alNA~fNi~KLGa~ 133 (266)
T COG3375 96 KMKQRERALS-MGYTLIAWTFDPLNALNARFNISKLGAI 133 (266)
T ss_pred HHHHHHHHHh-cCeeeEEEecccchhhhhhcchhhhcee
Confidence 8777888887 899976 6765444433 23455544
No 107
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=65.82 E-value=64 Score=29.44 Aligned_cols=73 Identities=12% Similarity=0.069 Sum_probs=51.3
Q ss_pred HHHHHHhhcCCceEEEE--EECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEE
Q 012402 243 EYIVRLVMDRSHKSVMV--IRGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFL 318 (464)
Q Consensus 243 EYI~RLVfD~~h~s~Vl--ikdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LL 318 (464)
+...+.+.+....++.+ ..+|++||..++-..++ + +--+.+.-+|++....+|+..+-.-+++|++ .|..++-
T Consensus 26 ~~y~~fl~~~~~~t~~~~~~~~~kLiav~v~D~l~~-g-lSaVY~fyDPd~~~~SlG~~~iL~eI~~a~~-~~l~y~Y 100 (128)
T PF04377_consen 26 EQYRRFLCSSPLGTYHLEYRLDGKLIAVAVVDILPD-G-LSAVYTFYDPDYSKRSLGTYSILREIELARE-LGLPYYY 100 (128)
T ss_pred HHHHHHHhCCCCCCEEEEEEeCCeEEEEEEeecccc-h-hhheeeeeCCCccccCcHHHHHHHHHHHHHH-cCCCEEe
Confidence 33345555433333333 35899999777665443 2 4455667799999999999999999999998 8888763
No 108
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=65.45 E-value=32 Score=36.32 Aligned_cols=29 Identities=31% Similarity=0.578 Sum_probs=26.3
Q ss_pred cchhhhhhcCCeEeeecccccccccccCCCCceeeeee
Q 012402 324 NAVGYFIKQGFTKEIYLEKDRWQGYIKDYDGGILMECK 361 (464)
Q Consensus 324 ~AIgFYkKqGFtkeI~lpk~iw~GyIKDYEgatLMEC~ 361 (464)
.|..+-++-||.. .|||+=+++|+.|+|.
T Consensus 232 pA~~lLe~EGF~~---------~~yVDIFDgGPtlea~ 260 (335)
T TIGR03243 232 PARAMLESEGFRY---------QGYVDIFDAGPTLEAE 260 (335)
T ss_pred HHHHHHHHcCCCc---------CCcccccCCCceEEEE
Confidence 4888999999987 5999999999999997
No 109
>KOG3014 consensus Protein involved in establishing cohesion between sister chromatids during DNA replication [Replication, recombination and repair]
Probab=62.73 E-value=42 Score=34.36 Aligned_cols=98 Identities=13% Similarity=0.146 Sum_probs=61.5
Q ss_pred cEEEEEecCCCchhhHHHHHHHHHHHhhcCCCCcHHHHHHHhhcCCceEEEEEE-CCEEEEEEEEEEec-----------
Q 012402 208 NLKFVCLSNDGIDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIR-GNVVVGGITYRPYV----------- 275 (464)
Q Consensus 208 ~I~f~vv~Nd~~~~~liwL~~LkniFskQLPkMpkEYI~RLVfD~~h~s~Vlik-dGkVIGGI~~R~f~----------- 275 (464)
.=+|..|..++++..+--+.+.......+|-.-+.+-+. . +..++|+.+. +..|||+++..+..
T Consensus 88 ~~rIv~V~~~~s~~~~kk~~Ev~~~VnnELg~~~~~~~~---~-~~~k~~lFIS~rk~~VGcLvaE~Is~a~~~i~~~~~ 163 (257)
T KOG3014|consen 88 DGRIVYVNPEDSPAALKKVEEVMKMVNNELGYQQIENQC---W-PKIKTFLFISVRKIVVGCLVAEPISQAFRVIESPGV 163 (257)
T ss_pred CCeEEEEeCCCChHHHHHHHHHHHHHHhhcCCccccccc---c-cceeEEEEEEecceeeeEEEehhhhhhhhhccCcCc
Confidence 444555665566666667777777777776543333221 1 2334555443 44589966633211
Q ss_pred ----------------CCceEEEEEEEeCCCccccCHHHHHHHHHHHHHH
Q 012402 276 ----------------SQKFGEIAFCAITADEQVKGYGTRLMNHLKQHAR 309 (464)
Q Consensus 276 ----------------~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Ar 309 (464)
...+.-|..|+|.+..|++|+.++|+.-+-..-.
T Consensus 164 ~~~~~s~~~~~~s~~~~~~~~GIsRIWV~s~~Rr~gIAs~lldva~~~~~ 213 (257)
T KOG3014|consen 164 TDSYDSQKAWQNSPLPEPAICGISRIWVSSLRRRKGIASLLLDVARCNFV 213 (257)
T ss_pred ccchhhHHHhccCCCCCCcEeeeEEEEeehhhhhhhhHHHHHHHHHHhhh
Confidence 0234669999999999999999999988765543
No 110
>PF09026 CENP-B_dimeris: Centromere protein B dimerisation domain; InterPro: IPR015115 Centromere protein B (CENP-B) interacts with centromeric heterochromatin in chromosomes and binds to a specific subset of alphoid satellite DNA, called the CENP-B box. CENP-B may organise arrays of centromere satellite DNA into a higher order structure, which then directs centromere formation and kinetochore assembly in mammalian chromosomes. The CENP-B dimerisation domain is composed of two alpha-helices, which are folded into an antiparallel configuration. Dimerisation of CENP-B is mediated by this domain, in which monomers dimerise to form a symmetrical, antiparallel, four-helix bundle structure with a large hydrophobic patch in which 23 residues of one monomer form van der Waals contacts with the other monomer. This CENP-B dimer configuration may be suitable for capturing two distant CENP-B boxes during centromeric heterochromatin formation []. ; GO: 0003677 DNA binding, 0003682 chromatin binding, 0006355 regulation of transcription, DNA-dependent, 0000775 chromosome, centromeric region, 0005634 nucleus; PDB: 1UFI_A.
Probab=61.57 E-value=2.7 Score=37.25 Aligned_cols=10 Identities=20% Similarity=0.368 Sum_probs=2.4
Q ss_pred Ccccchhhhh
Q 012402 109 DSSMRTFTAA 118 (464)
Q Consensus 109 ~~~~~~~~~~ 118 (464)
.-..-+|+.+
T Consensus 40 e~p~p~fgea 49 (101)
T PF09026_consen 40 EVPVPEFGEA 49 (101)
T ss_dssp ------HHHH
T ss_pred cccchhHHHH
Confidence 3456666655
No 111
>cd03173 DUF619-like DUF619 domain of various N-acetylglutamate Kinases and N-acetylglutamate Synthases. DUF619-like: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. This subgroup also includes the DUF619 domain of the FABP N-acetylglutamate kinase (NAGK), the enzyme that catalyzes the second reaction of arginine
Probab=60.83 E-value=52 Score=28.92 Aligned_cols=31 Identities=6% Similarity=0.134 Sum_probs=27.5
Q ss_pred CceEEEEEEEeCCCccccCHHHHHHHHHHHH
Q 012402 277 QKFGEIAFCAITADEQVKGYGTRLMNHLKQH 307 (464)
Q Consensus 277 ~~faEIvfIAVsps~QGKGyGS~LMnhLke~ 307 (464)
..+..+..++|.+.-|+.|++..+.+.+++.
T Consensus 31 ~~v~~LdkFav~~~~~~~gv~D~vf~~i~~d 61 (98)
T cd03173 31 NSIPYLDKFAVSDHLWLNNVTDNIFNLIRKD 61 (98)
T ss_pred CCCEEEEEEEEcccccccCHHHHHHHHHHhh
Confidence 4678899999999999999999999988765
No 112
>PRK14852 hypothetical protein; Provisional
Probab=59.92 E-value=82 Score=37.78 Aligned_cols=58 Identities=12% Similarity=0.057 Sum_probs=47.5
Q ss_pred ceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhh-hcCCeE
Q 012402 278 KFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFI-KQGFTK 336 (464)
Q Consensus 278 ~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYk-KqGFtk 336 (464)
.++|+..+|+++..+.+=+=-.|++.+..|+.. .++..++..-+..=..||+ -+||+.
T Consensus 120 ~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~-~~~dd~~i~VnPkH~~FY~r~l~f~~ 178 (989)
T PRK14852 120 NVVEVGALATQYSRRWTNLMVFLAKAMFQYSMM-SEVDDILVTVNPKHVKFYTDIFLFKP 178 (989)
T ss_pred eEEeeehheechhhcccchhHHHHHHHHHHHHH-cCCCeEEEEECcchHHHHHHHhCCcc
Confidence 679999999988877666556788888888886 8999888766666799999 689987
No 113
>PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2.7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A.
Probab=58.79 E-value=63 Score=30.75 Aligned_cols=82 Identities=15% Similarity=0.180 Sum_probs=47.7
Q ss_pred cHHHHHHHhhcCCceEEEEEECC-EEEEEEEEE-EecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEE
Q 012402 241 PKEYIVRLVMDRSHKSVMVIRGN-VVVGGITYR-PYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFL 318 (464)
Q Consensus 241 pkEYI~RLVfD~~h~s~VlikdG-kVIGGI~~R-~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LL 318 (464)
...|+.++= ... .-+++.+. +.++.++.. +-....+..+..+||.+.-||.|++-.+.+.+++.. +-..+-
T Consensus 51 v~~yl~~l~-~~~--~~iy~d~~y~~~AIVt~e~~~~~~~v~yLdKFav~~~~~g~gv~D~vf~~i~~d~----p~L~Wr 123 (170)
T PF04768_consen 51 VDHYLDRLN-NRL--FKIYVDEDYEGAAIVTPEGPDSNGPVPYLDKFAVSKSAQGSGVADNVFNAIRKDF----PKLFWR 123 (170)
T ss_dssp HTTHHHHHH-TS---SEEEEETTSSEEEEEEEE-SCTCTSEEEEEEEEE-HHHHHTTHHHHHHHHHHHH-----SSEEEE
T ss_pred HHHHHHHhh-ccc--eEEEEeCCceEEEEEEecCCCCCCCCeEEEEEEecchhhhcCHHHHHHHHHHHhc----cceEEE
Confidence 577888772 222 23333433 444433221 223456889999999999999999999999987653 332333
Q ss_pred EccCccchhhh
Q 012402 319 TYADNNAVGYF 329 (464)
Q Consensus 319 TyADn~AIgFY 329 (464)
...+|.-..+|
T Consensus 124 sr~~n~~~~Wy 134 (170)
T PF04768_consen 124 SREDNPNNKWY 134 (170)
T ss_dssp EETT-TTHHHH
T ss_pred ecCCCCcccEE
Confidence 45555544444
No 114
>PF09026 CENP-B_dimeris: Centromere protein B dimerisation domain; InterPro: IPR015115 Centromere protein B (CENP-B) interacts with centromeric heterochromatin in chromosomes and binds to a specific subset of alphoid satellite DNA, called the CENP-B box. CENP-B may organise arrays of centromere satellite DNA into a higher order structure, which then directs centromere formation and kinetochore assembly in mammalian chromosomes. The CENP-B dimerisation domain is composed of two alpha-helices, which are folded into an antiparallel configuration. Dimerisation of CENP-B is mediated by this domain, in which monomers dimerise to form a symmetrical, antiparallel, four-helix bundle structure with a large hydrophobic patch in which 23 residues of one monomer form van der Waals contacts with the other monomer. This CENP-B dimer configuration may be suitable for capturing two distant CENP-B boxes during centromeric heterochromatin formation []. ; GO: 0003677 DNA binding, 0003682 chromatin binding, 0006355 regulation of transcription, DNA-dependent, 0000775 chromosome, centromeric region, 0005634 nucleus; PDB: 1UFI_A.
Probab=52.19 E-value=5.3 Score=35.43 Aligned_cols=10 Identities=40% Similarity=0.641 Sum_probs=0.0
Q ss_pred CCCCCCCCcC
Q 012402 84 GADSDADDSE 93 (464)
Q Consensus 84 ~~~~~~~~~~ 93 (464)
+.|+++|++|
T Consensus 9 ~~dse~dsdE 18 (101)
T PF09026_consen 9 EEDSESDSDE 18 (101)
T ss_dssp ----------
T ss_pred Cccccccccc
Confidence 3455555443
No 115
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=50.60 E-value=6.7 Score=43.10 Aligned_cols=56 Identities=21% Similarity=0.276 Sum_probs=41.6
Q ss_pred EEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCc------EEE-EccCcc-chhhhhhcCCeE
Q 012402 280 GEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLT------HFL-TYADNN-AVGYFIKQGFTK 336 (464)
Q Consensus 280 aEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~------~LL-TyADn~-AIgFYkKqGFtk 336 (464)
+-|..+.|+|+||+-|+|..-|..+.+..++ +.+. |++ |-+... --.||+|.||.-
T Consensus 242 ariarvvvhpdyr~dglg~~sv~~a~ewI~e-RriPEmr~rkHlvetiaqmarynpffe~~gfky 305 (593)
T COG2401 242 ARIARVVVHPDYRADGLGQLSVIAALEWIIE-RRIPEMRPRKHLVETIAQMARYNPFFEKVGFKY 305 (593)
T ss_pred hheeEEEeccccccCccchhHHHHHHHHHHH-hhChhhhhhhhHHHHHHHHHhcCchhhhhceee
Confidence 4588999999999999999999999999987 5554 332 212111 135999999964
No 116
>COG5027 SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=50.05 E-value=16 Score=39.08 Aligned_cols=90 Identities=17% Similarity=0.150 Sum_probs=49.3
Q ss_pred HHhcCcEEEEEecCCC---chhhHHHHHHHHHHHhhcCCCCcHHHHHHHhhcCCceEEEEE-ECC----EEEEEEEEEEe
Q 012402 203 EEEAGNLKFVCLSNDG---IDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVI-RGN----VVVGGITYRPY 274 (464)
Q Consensus 203 eE~~G~I~f~vv~Nd~---~~~~liwL~~LkniFskQLPkMpkEYI~RLVfD~~h~s~Vli-kdG----kVIGGI~~R~f 274 (464)
-=|++.|.|..|...- --+++-+|. |.+..+. -|-||-.+.-|.++ +.| ++||+..=...
T Consensus 191 iYrD~~iS~~EiDG~~q~~~CrnLCLls--KlFLd~K----------tLYyDVDpflFYvl~~~~~~~~h~vGyFSKEK~ 258 (395)
T COG5027 191 IYRDKYISFFEIDGRKQRLYCRNLCLLS--KLFLDHK----------TLYYDVDPFLFYVLTERGDTGCHLVGYFSKEKE 258 (395)
T ss_pred eeecCceEEEEEcCcchhhHHHHHHHHH--HHHhcCc----------eeEEeccceEEEEEEEcCCcceeeeeeechhhc
Confidence 3467889988886653 223444443 1111111 02235555544444 322 58885442222
Q ss_pred cCCceEEEEEEEeCCCccccCHHHHHHHHHH
Q 012402 275 VSQKFGEIAFCAITADEQVKGYGTRLMNHLK 305 (464)
Q Consensus 275 ~~~~faEIvfIAVsps~QGKGyGS~LMnhLk 305 (464)
..++ .-+.=|-+.|-||++|||+.||++--
T Consensus 259 S~~~-yNLaCILtLP~yQRrGYG~lLIdFSY 288 (395)
T COG5027 259 SEQD-YNLACILTLPPYQRRGYGKLLIDFSY 288 (395)
T ss_pred cccc-CceEEEEecChhHhcccceEeeeeee
Confidence 2221 23555678999999999999987643
No 117
>cd04266 DUF619-NAGS-FABP DUF619 domain of N-acetylglutamate Synthase of the fungal arginine-biosynthetic pathway. DUF619-NAGS-FABP: This family includes the DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (also known as arginine-requiring protein 2 or ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. NAGS catalyzes the formation of NAG from acetylcoenzyme A and L-glutamate. The DUF619 domain, yet to be characterized, is predicted to function in NAGS association in fungi.
Probab=47.12 E-value=99 Score=27.70 Aligned_cols=31 Identities=19% Similarity=0.215 Sum_probs=27.1
Q ss_pred CceEEEEEEEeCCCccc-cCHHHHHHHHHHHH
Q 012402 277 QKFGEIAFCAITADEQV-KGYGTRLMNHLKQH 307 (464)
Q Consensus 277 ~~faEIvfIAVsps~QG-KGyGS~LMnhLke~ 307 (464)
..+..+..+||.+.-|| .|++-.+.+.+++.
T Consensus 37 ~~v~yLdKFav~~~~~gl~gv~D~vf~~m~~~ 68 (108)
T cd04266 37 EKIAYLDKFAVLPKAQGSDGIADILFNAMLDG 68 (108)
T ss_pred CCceEEEEEEEccccccccchHHHHHHHHHHc
Confidence 46788999999999997 89999999988763
No 118
>KOG2696 consensus Histone acetyltransferase type b catalytic subunit [Chromatin structure and dynamics]
Probab=46.34 E-value=22 Score=38.25 Aligned_cols=45 Identities=22% Similarity=0.183 Sum_probs=31.4
Q ss_pred EEEEEEEEEec---CCceEEEEEEEeCCCccccCHHHHHHHHHHHHHH
Q 012402 265 VVGGITYRPYV---SQKFGEIAFCAITADEQVKGYGTRLMNHLKQHAR 309 (464)
Q Consensus 265 VIGGI~~R~f~---~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Ar 309 (464)
++|+..+.-|. +.--.-|..+-|.|.||++|+|++||+.+.....
T Consensus 200 ~~gy~tiyk~y~yid~~R~RiSQmlilpPfq~~Glgs~l~E~i~r~~~ 247 (403)
T KOG2696|consen 200 YVGYYTIYKFYEYIDRIRPRISQMLILPPFQGKGLGSQLYEAIARDYL 247 (403)
T ss_pred eeeeEEEeehhhhhhhhhhhhheeEEeccccCCchHHHHHHHHHHhhc
Confidence 56655544332 1111347888999999999999999999985443
No 119
>KOG4264 consensus Nucleo-cytoplasmic protein MLN51 [General function prediction only]
Probab=46.23 E-value=21 Score=39.97 Aligned_cols=21 Identities=29% Similarity=0.376 Sum_probs=16.7
Q ss_pred hcCCCCcHHHHHHHhhcCCce
Q 012402 235 RQLPNMPKEYIVRLVMDRSHK 255 (464)
Q Consensus 235 kQLPkMpkEYI~RLVfD~~h~ 255 (464)
.|-|+-.++-|..+.||..+.
T Consensus 220 eQaPKSr~eLv~~YGyDIRn~ 240 (694)
T KOG4264|consen 220 EQAPKSRKELVTKYGYDIRNK 240 (694)
T ss_pred hcCchHHHHHHHHhCccccCC
Confidence 467888889999999887753
No 120
>PF02388 FemAB: FemAB family; InterPro: IPR003447 The femAB operon codes for two nearly identical approximately 50kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan []. These proteins are also considered as a factor influencing the level of methicillin resistance [].; GO: 0016755 transferase activity, transferring amino-acyl groups; PDB: 1XE4_A 1NE9_A 3GKR_A 1XIX_A 1P4N_A 1XF8_A 1LRZ_A.
Probab=42.24 E-value=74 Score=33.72 Aligned_cols=78 Identities=17% Similarity=0.179 Sum_probs=42.0
Q ss_pred EEEEEC-CEEEEEE-EEEEecCCceEEEEEEEeCC--CccccCHHHHHHHHHHHHHHhhCCCcEEEE-----cc------
Q 012402 257 VMVIRG-NVVVGGI-TYRPYVSQKFGEIAFCAITA--DEQVKGYGTRLMNHLKQHARDVDGLTHFLT-----YA------ 321 (464)
Q Consensus 257 ~Vlikd-GkVIGGI-~~R~f~~~~faEIvfIAVsp--s~QGKGyGS~LMnhLke~Are~~Gi~~LLT-----yA------ 321 (464)
+.+..+ ++|+|++ .++..+..++ -+..|-=-| ++...-+=..++..|++++++ +++..|-. +.
T Consensus 38 vgv~~d~~~v~aa~ll~~~~~~~g~-~~~yiprGPv~d~~d~ell~~f~~~Lk~~akk-~~a~~lridP~~~~~~~~~~g 115 (406)
T PF02388_consen 38 VGVKDDGGEVAAAALLLRKKPFKGF-KYAYIPRGPVMDYSDEELLEFFLEELKKYAKK-KRALFLRIDPNVIYQERDEDG 115 (406)
T ss_dssp EEEE-TTS-EEEEEEEEEEECTTTC-EEEEETT--EC-TT-HHHHHHHHHHHHHHHCT-TTEEEEEE--S-EEECE-TTS
T ss_pred EEEEeCCCeEEEEEEEEEeccCCce-eEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH-CCEEEEEEeCchhhhhccccc
Confidence 334444 5677644 3333222122 222222224 677788889999999999997 67665421 22
Q ss_pred -------CccchhhhhhcCCeE
Q 012402 322 -------DNNAVGYFIKQGFTK 336 (464)
Q Consensus 322 -------Dn~AIgFYkKqGFtk 336 (464)
+...+..|++.||.-
T Consensus 116 ~~~~~~~~~~~~~~l~~~G~~~ 137 (406)
T PF02388_consen 116 EPIEGEENDELIENLKALGFRH 137 (406)
T ss_dssp -EEEE-S-THHHHHHHHTT-CC
T ss_pred ccccCcchHHHHHHHHhcCcee
Confidence 123578999999986
No 121
>PF11124 Pho86: Inorganic phosphate transporter Pho86; InterPro: IPR024297 Pho86p is an ER protein which is produced in response to phosphate starvation. It is essential for growth when phosphate levels are limiting []. Pho86p is also involved in the regulation of Pho84p, a high-affinity phosphate transporter, which is localised to the endoplasmic reticulum (ER) in low phosphate medium. When the level of phosphate increases Pho84p is transported to the vacuole. Pho86p is required for packaging of Pho84p in to COPII vesicles [].
Probab=41.85 E-value=1e+02 Score=32.39 Aligned_cols=82 Identities=17% Similarity=0.219 Sum_probs=59.6
Q ss_pred eEEEEEECCEEEEEEEEEEecCC-----ceEEEEEEEeCCCccccCHHHHHHHHHH--------HHHHhhCCCcE-EEE-
Q 012402 255 KSVMVIRGNVVVGGITYRPYVSQ-----KFGEIAFCAITADEQVKGYGTRLMNHLK--------QHARDVDGLTH-FLT- 319 (464)
Q Consensus 255 ~s~VlikdGkVIGGI~~R~f~~~-----~faEIvfIAVsps~QGKGyGS~LMnhLk--------e~Are~~Gi~~-LLT- 319 (464)
.+.+++..+.+|+.|.+.+-..+ -.+.|.-+.|..=|+.-|+=.-||+.+. +|.+.+.|..- +++
T Consensus 170 NT~IIvYRetPIAiisl~~~~~~St~~~~vv~ItgigvRkVy~Ksgi~e~LidWA~~Rtr~l~~ey~k~k~~~si~ll~d 249 (304)
T PF11124_consen 170 NTHIIVYRETPIAIISLVPNKDQSTKENFVVKITGIGVRKVYVKSGIDEDLIDWAMLRTRQLYKEYLKGKKGCSIKLLVD 249 (304)
T ss_pred cceEEEEcCCceEEEEeccccccCCCceEEEEEeeeEEEEEEeecChHHHHHHHHHHHHHHHHHHhccccccceEEEEEE
Confidence 45677778899998887764332 3467888999999999999999999984 44433234442 332
Q ss_pred -c-cCccchhhhhhcCCeE
Q 012402 320 -Y-ADNNAVGYFIKQGFTK 336 (464)
Q Consensus 320 -y-ADn~AIgFYkKqGFtk 336 (464)
| .|+.-....+++||..
T Consensus 250 ~YSFD~~~~k~L~~~gF~~ 268 (304)
T PF11124_consen 250 VYSFDKDMKKTLKKKGFKK 268 (304)
T ss_pred eeeccHHHHHHHHHCCCee
Confidence 5 3777899999999987
No 122
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [].; PDB: 2HQY_A.
Probab=38.86 E-value=4e+02 Score=26.43 Aligned_cols=116 Identities=15% Similarity=0.139 Sum_probs=57.5
Q ss_pred HHHHHhcCcEEEEEecCCC-chhhHHHHHHHHHHHhhcCCCCcHHHHHHHhh---cCCceEEEEEE-CCEEEEEEEEEEe
Q 012402 200 LKREEEAGNLKFVCLSNDG-IDEHMVWLIGLKNIFARQLPNMPKEYIVRLVM---DRSHKSVMVIR-GNVVVGGITYRPY 274 (464)
Q Consensus 200 a~~eE~~G~I~f~vv~Nd~-~~~~liwL~~LkniFskQLPkMpkEYI~RLVf---D~~h~s~Vlik-dGkVIGGI~~R~f 274 (464)
...-+++|. .++++.-.. ++...--|..+..-|.+.-..--...+...+. ......+++.. +|+|+|++.+.+.
T Consensus 123 in~~~k~G~-~~~~~~~~~~~~~~~~el~~i~~~W~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~dgki~af~~~~~~ 201 (299)
T PF09924_consen 123 INRFEKEGY-TFEVVPIPELDPELRDELLEISDEWLKEKERPERGFIMGALEHFDELGLRGFVARVADGKIVAFAIGSPL 201 (299)
T ss_dssp HHHHHHH---T-EEEE-----GGGHHHHHHHHHHHHHHCTHHHHHHHHHHHHTHHHHT-EEEEEEE-TTEEEEEEEEEEE
T ss_pred HHHHhcCce-EEEEEECCCCCHHHHHHHHHHHHHHHhcCchhHHHHHhccccchhhcCceEEEEEECCCcEEEEEEEEEc
Confidence 344566663 355544321 23333333444444444420011233322221 23556677777 8999999999887
Q ss_pred cCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEE
Q 012402 275 VSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFL 318 (464)
Q Consensus 275 ~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LL 318 (464)
...+.+-|.++-=+++ --+|+=..|+.++.+.+++ .|+..+-
T Consensus 202 ~~~~~~~~~~~k~~~~-a~~G~~e~l~~~~~~~~~~-~g~~~ln 243 (299)
T PF09924_consen 202 GGRDGWSIDFEKADPD-APKGIYEFLNVEFAEHLKA-EGVEYLN 243 (299)
T ss_dssp E-TTEEEEEEEEE-TT--STTHHHHHHHHHHHHS---TT--EEE
T ss_pred cCCccEEEEEEecCCC-CCCcHHHHHHHHHHHhhhh-CCceEEE
Confidence 6223233333332333 3689999999999999996 7888763
No 123
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=37.48 E-value=5.4e+02 Score=27.53 Aligned_cols=135 Identities=15% Similarity=0.177 Sum_probs=70.6
Q ss_pred cccchhhhhhhccCccchhhHHHHHHHhc---CcEEEEEecCCC-chhhH-HHHHHHHHHHhhc--CCCCcHHHHHHHhh
Q 012402 178 DTVKIFTENIQASGAYSAREELLKREEEA---GNLKFVCLSNDG-IDEHM-VWLIGLKNIFARQ--LPNMPKEYIVRLVM 250 (464)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~rd~~a~~eE~~---G~I~f~vv~Nd~-~~~~l-iwL~~LkniFskQ--LPkMpkEYI~RLVf 250 (464)
..-..|.++|.+..+.-. +..++|-++ --|+|++++.+. .+..+ .+..-+.+.|.+. .|.+.+++...+.-
T Consensus 168 ~gy~~FDdfLa~Lss~kR--k~IRrERr~v~~~Gi~~~~l~G~~i~~~~~~~f~~~Y~~Ty~k~~~~~yLt~~FF~~l~~ 245 (370)
T PF04339_consen 168 RGYRSFDDFLAALSSRKR--KNIRRERRKVAEQGIRIRTLTGDEITDEDWDRFYRLYQNTYAKRWGRPYLTREFFEQLAE 245 (370)
T ss_pred CCCCCHHHHHHHhchhhH--HHHHHHHHHHHHcCCEEEEEeCCCCCHHHHHHHHHHHHHHHHhhCCChhhcHHHHHHHHH
Confidence 444567777774433222 222222222 358999998775 33332 3333345555554 67777888776654
Q ss_pred c-CCceEEEEE-ECCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEE
Q 012402 251 D-RSHKSVMVI-RGNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFL 318 (464)
Q Consensus 251 D-~~h~s~Vli-kdGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LL 318 (464)
. +...-+++. ++|++||+..+.. ..+.+--.+.....++.+.-+=.... +.+++|.+ +|++.+.
T Consensus 246 ~m~~~~~l~~A~~~g~~Va~aL~l~--~~~~LyGRYwG~~~~~~~LHFe~cYY-q~Ie~aI~-~Gl~~f~ 311 (370)
T PF04339_consen 246 TMPEQVVLVVARRDGQPVAFALCLR--GDDTLYGRYWGCDEEIPFLHFELCYY-QGIEYAIE-HGLRRFE 311 (370)
T ss_pred hCcCCEEEEEEEECCeEEEEEEEEE--eCCEEEEeeecccccccCcchHHHHH-HHHHHHHH-cCCCEEE
Confidence 3 333323333 5899999644322 22333344444444444444433333 35677776 7777654
No 124
>COG2898 Uncharacterized conserved protein [Function unknown]
Probab=36.12 E-value=3.9e+02 Score=30.25 Aligned_cols=138 Identities=16% Similarity=0.147 Sum_probs=81.1
Q ss_pred ccccccchhhhhhhccCccchhhHHHHHHHhcCcEEEEEecCCCchhhHHHHHHHHHHHh--hcCCCCcHHHHHHHhhcC
Q 012402 175 GKEDTVKIFTENIQASGAYSAREELLKREEEAGNLKFVCLSNDGIDEHMVWLIGLKNIFA--RQLPNMPKEYIVRLVMDR 252 (464)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~rd~~a~~eE~~G~I~f~vv~Nd~~~~~liwL~~LkniFs--kQLPkMpkEYI~RLVfD~ 252 (464)
--||..-.++ ++...|.--.--..++..-++.-+.|+++..+..+.-+-=|..+-.-|. +..+. +.+-.- .||+
T Consensus 312 lGEeA~Vdl~-~Fsl~Gk~~~~~R~a~~r~~r~G~tfeI~~~~~~~~~l~eL~~iSD~Wl~~~~~rE--kgFsLG-~fdp 387 (538)
T COG2898 312 LGEEAVVDLA-NFSLSGKRMRGLRQAVNRADREGLTFEIVPPDQSPAELDELRAISDEWLDHKTRRE--KGFSLG-FFDP 387 (538)
T ss_pred ccceEEEehh-hccccCcccccHHHHHHHHHhcCcEEEEeCCccChHHHHHHHHhCHHhhhcCCccc--ceeecc-CCCc
Confidence 3455555565 6666665555456677777788899999995544333222222222221 12111 111122 4565
Q ss_pred CceE---EEEEE-CCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEE
Q 012402 253 SHKS---VMVIR-GNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFL 318 (464)
Q Consensus 253 ~h~s---~Vlik-dGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LL 318 (464)
.+.. +++++ +|+|+|++.+.+-....-+-|..+--+|+- =+|+=-.|+.++..++|+ .|++.+-
T Consensus 388 ~yl~~~~va~~~~~g~VvaFa~l~~~~~~~~~SlDlMR~sp~a-p~g~mdfLf~~li~~aKe-~G~~~fs 455 (538)
T COG2898 388 RYLDIFPVAAVDNEGEVVAFANLMPTGGKEGYSLDLMRRSPDA-PNGTMDFLFSELILWAKE-EGYQRFS 455 (538)
T ss_pred cccccceeeEEcCCCCeEEEEeecccCCcceeEEEeeecCCCC-CchHHHHHHHHHHHHHHH-cCCeEEe
Confidence 5432 33444 588999888766333233445556556653 378999999999999998 8988763
No 125
>PF11039 DUF2824: Protein of unknown function (DUF2824); InterPro: IPR022568 This family of proteins has no known function. Members of the family are found in P22-like viruses and bacteria. Some of the phage members have been annotated as head assembly proteins, but this has not been confirmed.
Probab=35.73 E-value=4e+02 Score=25.41 Aligned_cols=91 Identities=15% Similarity=0.156 Sum_probs=50.3
Q ss_pred CCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEcc-Cc--cchhhhhhcCCeEee
Q 012402 262 GNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYA-DN--NAVGYFIKQGFTKEI 338 (464)
Q Consensus 262 dGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyA-Dn--~AIgFYkKqGFtkeI 338 (464)
+|-..||+.+..+-+...+|..-+ -+|.+|| |....-..+..+.-++..+...++++ +. +-.-+-+-.|-+...
T Consensus 45 eg~~l~Gi~~v~~i~~~~vecHa~-y~P~fRG--~a~~~~~~F~kwlL~Ns~f~~vit~vp~kt~~Grvic~llg~~RVG 121 (151)
T PF11039_consen 45 EGGQLGGIVYVEEIQPSVVECHAM-YDPGFRG--YALEIGRLFCKWLLENSPFQNVITFVPDKTRYGRVICRLLGARRVG 121 (151)
T ss_pred eceEEEEEEEEEEEeeeeEEEEee-eccccch--hHHHHHHHHHHHHhcCCceeEEEEecccccccchhHhhhhCCceee
Confidence 444444454433334445565443 3799998 76665555666666556677777764 32 234455556776654
Q ss_pred ecccccccccccCCCCceeeee
Q 012402 339 YLEKDRWQGYIKDYDGGILMEC 360 (464)
Q Consensus 339 ~lpk~iw~GyIKDYEgatLMEC 360 (464)
++++ |.+.-.|.||++.
T Consensus 122 ~id~-----~~~g~~~vTlYq~ 138 (151)
T PF11039_consen 122 HIDD-----YFKGVDGVTLYQL 138 (151)
T ss_pred eHHH-----HhcCCCceEEEEc
Confidence 4432 1122257888885
No 126
>COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism]
Probab=35.22 E-value=1.1e+02 Score=33.50 Aligned_cols=84 Identities=19% Similarity=0.220 Sum_probs=49.7
Q ss_pred chhhHHHHHHHHHH----HhhcCCCCcHHHHHHHhhcCCceEEEEEECCEEEE--EEEEEEecCCceEEEEEEEeCCCcc
Q 012402 219 IDEHMVWLIGLKNI----FARQLPNMPKEYIVRLVMDRSHKSVMVIRGNVVVG--GITYRPYVSQKFGEIAFCAITADEQ 292 (464)
Q Consensus 219 ~~~~liwL~~Lkni----FskQLPkMpkEYI~RLVfD~~h~s~VlikdGkVIG--GI~~R~f~~~~faEIvfIAVsps~Q 292 (464)
...-.+||-.|+.+ |.+-| .|-.|+.|+- +...-+++ -|.--| .++|.--.+..+..+..+||.++.|
T Consensus 340 ttw~~Ldl~r~q~LI~~SFkRTL--d~h~y~~r~~---~~La~~iV-sgdY~g~aIlTyegs~~~~vpYLDKfAVl~~aQ 413 (495)
T COG5630 340 TTWKDLDLPRLQHLIQSSFKRTL--DPHYYETRIN---TPLARAIV-SGDYRGAAILTYEGSGENNVPYLDKFAVLDDAQ 413 (495)
T ss_pred CChhhcCcHHHHHHHHHHHhhcc--CHHHHHHhcc---CcceeEEe-eccceeeEEEEeeccCCCCCcceeeeecccccc
Confidence 34456677666555 44544 3677777662 11212222 232333 2233211234677899999999999
Q ss_pred c-cCHHHHHHHHHHHHH
Q 012402 293 V-KGYGTRLMNHLKQHA 308 (464)
Q Consensus 293 G-KGyGS~LMnhLke~A 308 (464)
| -|||..+.+-+-+.-
T Consensus 414 Gs~gisd~vfniM~e~f 430 (495)
T COG5630 414 GSEGISDAVFNIMREEF 430 (495)
T ss_pred ccchHHHHHHHHHHHhC
Confidence 9 999999988776553
No 127
>PF15387 DUF4611: Domain of unknown function (DUF4611)
Probab=34.81 E-value=28 Score=30.81 Aligned_cols=21 Identities=43% Similarity=0.642 Sum_probs=11.0
Q ss_pred ccccCCcccccccCCCcccch
Q 012402 94 DAVVDDDEDEFENDNDSSMRT 114 (464)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~ 114 (464)
+++.+|||||.|.++...-||
T Consensus 64 E~ldg~deddaede~n~~n~t 84 (96)
T PF15387_consen 64 EALDGDDEDDAEDENNIDNRT 84 (96)
T ss_pred hhccCccccccccccCccccc
Confidence 444555555555555545555
No 128
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=33.27 E-value=5e+02 Score=31.71 Aligned_cols=128 Identities=13% Similarity=0.103 Sum_probs=72.9
Q ss_pred hhhccCccchhhHHHHHHHhcCcEEEEEecCCC-chhhHHHHHHHHHHHhhcCCCCcHH-HHHHHh--hcCCceEEEEEE
Q 012402 186 NIQASGAYSAREELLKREEEAGNLKFVCLSNDG-IDEHMVWLIGLKNIFARQLPNMPKE-YIVRLV--MDRSHKSVMVIR 261 (464)
Q Consensus 186 ~~~~~~~~~~rd~~a~~eE~~G~I~f~vv~Nd~-~~~~liwL~~LkniFskQLPkMpkE-YI~RLV--fD~~h~s~Vlik 261 (464)
.+...|....-=..+...-++.-++|+++.... ++..+--|..+-+-|...-+.+-.. ++-+.- ++... .+++..
T Consensus 348 ~Fsl~Gk~~~~lR~a~nra~r~G~t~~i~~~~~~~~~~~~~L~~isd~Wl~~~~EkGFSm~LGr~~~~~~~~~-~i~~a~ 426 (1094)
T PRK02983 348 DFTLSGPDMRPVRQAVTRVRRAGYTVRIRRHRDLPAEEMAQVIARADAWRDTETERGFSMALGRLGDPADGDC-LLVEAH 426 (1094)
T ss_pred cCCccCchhHHHHHHHHHHHhCCCEEEEeeCCCCCHHHHHHHHHHHHHHhcCCCCCceeeecCcccchhcCce-EEEEEE
Confidence 344444433323445555555568888886543 3334444544444555542221111 011111 12222 123233
Q ss_pred --CCEEEEEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEE
Q 012402 262 --GNVVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHF 317 (464)
Q Consensus 262 --dGkVIGGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~L 317 (464)
+|+|+|++.+.++...+ +-|..+=-+|+- -.|+=-.|+.++.+++++ .|+..+
T Consensus 427 d~~G~i~af~s~~p~~~~g-~slDLMRr~pda-pnGvmE~L~~~l~~~~k~-~G~~~~ 481 (1094)
T PRK02983 427 DADGQVVALLSFVPWGRRG-LSLDLMRRSPDA-PNGVIELMVAELALEAES-LGITRI 481 (1094)
T ss_pred CCCCeEEEEEEEeeeCCCC-EEEEecccCCCC-CCCHHHHHHHHHHHHHHH-cCCCEE
Confidence 68999999998864333 445555555653 689999999999999998 999976
No 129
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=32.34 E-value=1.1e+02 Score=32.57 Aligned_cols=52 Identities=19% Similarity=0.391 Sum_probs=40.0
Q ss_pred EEeCCCccccCHHHHHHHHHHHHHHhhCCCcEE-EEccCccchhhhhhcCCeEe
Q 012402 285 CAITADEQVKGYGTRLMNHLKQHARDVDGLTHF-LTYADNNAVGYFIKQGFTKE 337 (464)
Q Consensus 285 IAVsps~QGKGyGS~LMnhLke~Are~~Gi~~L-LTyADn~AIgFYkKqGFtke 337 (464)
+-+++....+.+...|++.+.+.+++ .|+..+ +.|.+..-....+.+||...
T Consensus 106 ~l~~~~~~~~~~~~~L~~~~~~~a~~-~~~Ss~h~lF~~~~~~~~l~~~G~~~r 158 (370)
T PF04339_consen 106 LLIAPGADRAALRAALLQALEQLAEE-NGLSSWHILFPDEEDAAALEEAGFLSR 158 (370)
T ss_pred eeECCCCCHHHHHHHHHHHHHHHHHH-cCCCcceeecCCHHHHHHHHhCCCcee
Confidence 45667777788899999999999998 888854 34666555566788999764
No 130
>KOG3130 consensus Uncharacterized conserved protein [Function unknown]
Probab=31.74 E-value=25 Score=38.33 Aligned_cols=10 Identities=40% Similarity=0.886 Sum_probs=6.2
Q ss_pred HHHhhcCCCC
Q 012402 231 NIFARQLPNM 240 (464)
Q Consensus 231 niFskQLPkM 240 (464)
.-|+.|||..
T Consensus 352 hsfAq~lp~i 361 (514)
T KOG3130|consen 352 HSFAQELPTI 361 (514)
T ss_pred ccccccCCcc
Confidence 4466777764
No 131
>KOG4601 consensus Uncharacterized conserved protein [Function unknown]
Probab=31.63 E-value=37 Score=34.62 Aligned_cols=48 Identities=17% Similarity=0.170 Sum_probs=33.5
Q ss_pred EEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCcc---chhhhhh
Q 012402 280 GEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNN---AVGYFIK 331 (464)
Q Consensus 280 aEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~---AIgFYkK 331 (464)
.-|..+.|+++.|+.|-|.+|++++.+. .++.---+.-|++ -++|-.|
T Consensus 109 lcILDFyVheS~QR~G~G~~lfdyMl~k----E~vephQ~a~DrPS~kLl~Fm~k 159 (264)
T KOG4601|consen 109 LCILDFYVHESEQRSGNGFKLFDYMLKK----ENVEPHQCAFDRPSAKLLQFMEK 159 (264)
T ss_pred ceEEEEEeehhhhhcCchHHHHHHHHHh----cCCCchheeccChHHHHHHHHHH
Confidence 4599999999999999999999887654 4555333333333 3556554
No 132
>PRK04531 acetylglutamate kinase; Provisional
Probab=31.55 E-value=1.7e+02 Score=31.31 Aligned_cols=32 Identities=16% Similarity=0.189 Sum_probs=28.1
Q ss_pred CceEEEEEEEeCCCccccCHHHHHHHHHHHHH
Q 012402 277 QKFGEIAFCAITADEQVKGYGTRLMNHLKQHA 308 (464)
Q Consensus 277 ~~faEIvfIAVsps~QGKGyGS~LMnhLke~A 308 (464)
..+..+..+||.+.-||.|++.-+.+.+++..
T Consensus 308 ~~~~~Ldkf~v~~~~~~~~v~d~vf~~~~~~~ 339 (398)
T PRK04531 308 GGGPYLDKFAVLDDARGEGLGRAVWNVMREET 339 (398)
T ss_pred CCceEeEEEEEccchhhcChHHHHHHHHHhhC
Confidence 45678999999999999999999999888664
No 133
>PTZ00450 macrophage migration inhibitory factor-like protein; Provisional
Probab=30.29 E-value=2.6e+02 Score=24.91 Aligned_cols=82 Identities=12% Similarity=0.226 Sum_probs=50.8
Q ss_pred hhHHHHHHHHHHHhhcCCCCcHHHHHHHhhcCCceEEEEEECCEEE--EEEEEEEecCCceEEEEEEEeCCCccccCHHH
Q 012402 221 EHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRGNVVV--GGITYRPYVSQKFGEIAFCAITADEQVKGYGT 298 (464)
Q Consensus 221 ~~liwL~~LkniFskQLPkMpkEYI~RLVfD~~h~s~VlikdGkVI--GGI~~R~f~~~~faEIvfIAVsps~QGKGyGS 298 (464)
....++..++.+.++.|.+ |..|+ +|.++.+..+ ||-. ..-.++||..|......|.+.+.+
T Consensus 16 ~~~~l~~~~~~~~a~~lgK-Pe~yv-----------mV~~~~~~~m~fgGs~----~P~A~~~l~siG~~~~~~n~~~s~ 79 (113)
T PTZ00450 16 KRANLSQAYRMICREELGK-PEDFV-----------MTAFSDSTPMSFQGST----APAAYVRVEAWGEYAPSKPKMMTP 79 (113)
T ss_pred CHHHHHHHHHHHHHHhhCC-CHHHE-----------EEEEeCCceEEEcCCC----CCEEEEEEEEecCcCHHHHHHHHH
Confidence 4455555556566565544 77776 5666665433 3311 123467888888666678889999
Q ss_pred HHHHHHHHHHHhhCCCc---EEEEccC
Q 012402 299 RLMNHLKQHARDVDGLT---HFLTYAD 322 (464)
Q Consensus 299 ~LMnhLke~Are~~Gi~---~LLTyAD 322 (464)
.|.+.+.+. .|+. -++.|.|
T Consensus 80 ~i~~~l~~~----LgIp~dRiYI~f~d 102 (113)
T PTZ00450 80 RITAAITKE----CGIPAERIYVFYYS 102 (113)
T ss_pred HHHHHHHHH----cCCCcccEEEEEEc
Confidence 888888776 4555 3455655
No 134
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=29.11 E-value=1.7e+02 Score=31.37 Aligned_cols=70 Identities=16% Similarity=0.169 Sum_probs=46.9
Q ss_pred cHHHHHHHhhcCC---ceEEEEEEC--CEEEEEEEEEEec------CCceEEEEEEEeCCCccccCHHHHHHHHHHHHHH
Q 012402 241 PKEYIVRLVMDRS---HKSVMVIRG--NVVVGGITYRPYV------SQKFGEIAFCAITADEQVKGYGTRLMNHLKQHAR 309 (464)
Q Consensus 241 pkEYI~RLVfD~~---h~s~Vlikd--GkVIGGI~~R~f~------~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Ar 309 (464)
..|++.+.+..+. .+++.+-.. .++||+|...+.. .-..+||.|+||+...|+|-+--.|+..+-..+-
T Consensus 116 ~~EFl~Wal~~pg~kK~whigvRvk~t~klVaFIsa~p~~v~vRgK~~~~~evNFLCihk~lRsKRltPvLIkEiTRR~n 195 (451)
T COG5092 116 SVEFLQWALDGPGGKKRWHIGVRVKGTQKLVAFISAKPHLVSVRGKRSSVLEVNFLCIHKELRSKRLTPVLIKEITRRAN 195 (451)
T ss_pred HHHHHHHhhcCCCCceeeEEEEEEcccceeEEEEecceeEEEEcccccccceEEEEEEehhhhhCccchHHHHHHHHhhh
Confidence 3555554444443 223333334 4899988865421 1235899999999999999999999988877664
Q ss_pred h
Q 012402 310 D 310 (464)
Q Consensus 310 e 310 (464)
.
T Consensus 196 ~ 196 (451)
T COG5092 196 V 196 (451)
T ss_pred h
Confidence 3
No 135
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=28.14 E-value=45 Score=37.49 Aligned_cols=32 Identities=19% Similarity=0.350 Sum_probs=23.4
Q ss_pred hhhhhhcCCeEeeecccccccccccCCCCceeeeeecCCCCC
Q 012402 326 VGYFIKQGFTKEIYLEKDRWQGYIKDYDGGILMECKIDPKLP 367 (464)
Q Consensus 326 IgFYkKqGFtkeI~lpk~iw~GyIKDYEgatLMEC~L~Pki~ 367 (464)
+-||...-|...-++ +|.++.+..|.-||++|
T Consensus 439 L~f~d~~t~d~v~ki----------~i~~aSvv~~~WhpkLN 470 (641)
T KOG0772|consen 439 LFFFDRMTLDTVYKI----------DISTASVVRCLWHPKLN 470 (641)
T ss_pred EEEEeccceeeEEEe----------cCCCceEEEEeecchhh
Confidence 558887777653222 45688899999999998
No 136
>PF03588 Leu_Phe_trans: Leucyl/phenylalanyl-tRNA protein transferase; InterPro: IPR004616 Leucyl/phenylalanyl-tRNA--protein transferase 2.3.2.6 from EC transfers a Leu or Phe to the amino end of certain proteins to enable degradation. The N-terminal residue controls the biological half-life of many proteins via the N-end rule pathway.; GO: 0008914 leucyltransferase activity, 0030163 protein catabolic process; PDB: 2Z3L_A 2Z3O_A 2Z3P_A 2DPT_B 2Z3M_B 2Z3N_B 2DPS_B 2Z3K_B 2CXA_A.
Probab=27.90 E-value=3.8e+02 Score=25.91 Aligned_cols=102 Identities=22% Similarity=0.242 Sum_probs=59.9
Q ss_pred HHHHHHHhcCcEEEEEecCCC--------c--hhhHHHHHHHHHHHhhcCCCCcHHHHHHHhhcCCceEEEEEECCEEEE
Q 012402 198 ELLKREEEAGNLKFVCLSNDG--------I--DEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRGNVVVG 267 (464)
Q Consensus 198 ~~a~~eE~~G~I~f~vv~Nd~--------~--~~~liwL~~LkniFskQLPkMpkEYI~RLVfD~~h~s~VlikdGkVIG 267 (464)
+..++.-+++..+|++-++-. . .+.--|+.. .|...|.. |-.....+++=+..++++||
T Consensus 43 kslrk~lr~~~~~v~~n~~F~~Vi~~Ca~~~~~~~~TWI~~----------~~~~aY~~-Lh~~G~aHSvEvw~~~~LvG 111 (173)
T PF03588_consen 43 KSLRKFLRKGRFTVTINTAFEEVIRACAEPRRGQDGTWITP----------EMIEAYTE-LHELGYAHSVEVWQGGELVG 111 (173)
T ss_dssp HHHHHHHHT-SEEEEESS-HHHHHHHHHTSS--STGTTS-H----------HHHHHHHH-HHHTTSEEEEEEEETTEEEE
T ss_pred HHHHHHhCCCCeEEEECCCHHHHHHHHccCCCCCCCCCcCH----------HHHHHHHH-HHHcCeeEEEeeecCCeeEE
Confidence 446667788888877765531 1 123344442 23344442 32223346777778999999
Q ss_pred EEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEE
Q 012402 268 GITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHF 317 (464)
Q Consensus 268 GI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~L 317 (464)
|+....+-.-=|.|=+|- +..+-++.-|-+|.+++++ .|+..+
T Consensus 112 GlyGv~iG~~F~GESMFs------~~~~ASKval~~L~~~L~~-~g~~li 154 (173)
T PF03588_consen 112 GLYGVAIGGVFFGESMFS------RVSNASKVALVALVEHLRQ-CGFQLI 154 (173)
T ss_dssp EEEEEEETTEEEEEEEEE------SSTTHHHHHHHHHHHHHHH-TT--EE
T ss_pred eeeCEEECCEEEeccccc------cCCChHHHHHHHHHHHHHH-CCCcEE
Confidence 988766533223455553 3457899999999999997 787655
No 137
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=26.15 E-value=34 Score=40.82 Aligned_cols=9 Identities=56% Similarity=0.996 Sum_probs=4.0
Q ss_pred CCCCCCcCc
Q 012402 86 DSDADDSED 94 (464)
Q Consensus 86 ~~~~~~~~~ 94 (464)
+.|+|++||
T Consensus 1404 ~dd~DeeeD 1412 (1516)
T KOG1832|consen 1404 DDDSDEEED 1412 (1516)
T ss_pred ccccCcccc
Confidence 444444443
No 138
>TIGR00667 aat leucyl/phenylalanyl-tRNA--protein transferase. The N-terminal residue controls the biological half-life of many proteins via the N-end rule pathway. This enzyme transfers a Leu or Phe to the amino end of certain proteins to enable degradation.
Probab=24.79 E-value=3.1e+02 Score=26.96 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=62.3
Q ss_pred HHHHHHHhcCcEEEEEecCCC-------ch-hhHHHHHHHHHHHhhcCCCCcHHHHHHHhhcCCceEEEEEECCEEEEEE
Q 012402 198 ELLKREEEAGNLKFVCLSNDG-------ID-EHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRGNVVVGGI 269 (464)
Q Consensus 198 ~~a~~eE~~G~I~f~vv~Nd~-------~~-~~liwL~~LkniFskQLPkMpkEYI~RLVfD~~h~s~VlikdGkVIGGI 269 (464)
+..++.-+++..+|++-+.-. .+ ..-.|+. |.|-+.|.. |-.....+++=+..++++|||+
T Consensus 45 rsL~k~lr~~~f~vtin~~F~~Vi~~Ca~~r~~gTWI~----------~e~~~aY~~-LH~~G~AHSvEvw~~~~LvGGl 113 (185)
T TIGR00667 45 RSMKRFLKRSPYRVSVNYAFGQVIEGCASDRPEGTWIS----------DELVEAYHR-LHELGHAHSFEVWQGDELVGGM 113 (185)
T ss_pred HHHHHHHcCCCeEEEEcCcHHHHHHHHcCCCCCCCCCC----------HHHHHHHHH-HHHhCceEEEEEEECCEEEEee
Confidence 346667778888887765431 00 1223443 234455552 2222334567677899999998
Q ss_pred EEEEecCCceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEE
Q 012402 270 TYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFL 318 (464)
Q Consensus 270 ~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LL 318 (464)
....+-. +||.-+-=.+...-++.-|-+|.+++++ .|+..|=
T Consensus 114 YGv~iG~------~F~GESMFs~~~nASKvAl~~L~~~L~~-~g~~liD 155 (185)
T TIGR00667 114 YGIAQGG------LFCGESMFSRMTNASKTALLVFCEHFIR-HGGQLID 155 (185)
T ss_pred eeeeeCC------eEEeccccccCCChhHHHHHHHHHHHHH-CCCcEEE
Confidence 8655422 2233333355667788889999999997 7877553
No 139
>PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine. This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A.
Probab=23.94 E-value=1.5e+02 Score=31.55 Aligned_cols=47 Identities=19% Similarity=0.133 Sum_probs=0.0
Q ss_pred ceEEEEEE--CCEEEEEEEEEEecCC-----------------------------------ceEEEEEEEeCCCccccCH
Q 012402 254 HKSVMVIR--GNVVVGGITYRPYVSQ-----------------------------------KFGEIAFCAITADEQVKGY 296 (464)
Q Consensus 254 h~s~Vlik--dGkVIGGI~~R~f~~~-----------------------------------~faEIvfIAVsps~QGKGy 296 (464)
.+.||+.+ .|+|||.+.+..-... +..||--+.++|+||+-|.
T Consensus 59 ~YlfVLED~~tg~vvGts~I~a~vG~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~R~~~~ 138 (342)
T PF04958_consen 59 GYLFVLEDTETGEVVGTSAIEAAVGLDEPFYSYRVSTLVHASRELGVRNRHETLTLSNDYTGCSELCTLFLDPDYRGGGN 138 (342)
T ss_dssp EEEEEEEETTT--EEEEEEEESSTTSSS---EEEEEEEEEEETTTTEEEEEEEEEEE-TTTTSEEEEEEEE-GGGTTSHH
T ss_pred ceEEEEEecCCCcEEEEEeEEeccCCCCCcEEEEcCceeEcCcccCCccceeeEeeecCCCCCeeeEEEEECHHHcCCch
Q ss_pred HHHH
Q 012402 297 GTRL 300 (464)
Q Consensus 297 GS~L 300 (464)
|+.|
T Consensus 139 G~lL 142 (342)
T PF04958_consen 139 GRLL 142 (342)
T ss_dssp HHHH
T ss_pred HHHH
No 140
>PF11090 DUF2833: Protein of unknown function (DUF2833); InterPro: IPR020335 This entry contains proteins with no known function.
Probab=23.53 E-value=1.6e+02 Score=25.76 Aligned_cols=42 Identities=7% Similarity=0.161 Sum_probs=27.9
Q ss_pred cCHHHHHHHHHHHHHHhhCCCcEEEEccCc-cchhhhhhcCCeE
Q 012402 294 KGYGTRLMNHLKQHARDVDGLTHFLTYADN-NAVGYFIKQGFTK 336 (464)
Q Consensus 294 KGyGS~LMnhLke~Are~~Gi~~LLTyADn-~AIgFYkKqGFtk 336 (464)
.=+-++|+.++....++ ++...=.++..| .+++|-+..|++-
T Consensus 39 ~eF~k~i~~~~d~~l~~-Y~~l~N~V~~~N~~HIRfLk~lGA~f 81 (86)
T PF11090_consen 39 REFRKLIKEYLDKMLKQ-YPVLWNFVWVGNKSHIRFLKSLGAVF 81 (86)
T ss_pred HHHHHHHHHHHHHHHHH-hhheeEEEEeCCHHHHHHHHhcCcEE
Confidence 44667777777776665 554322334444 6999999999974
No 141
>PF10446 DUF2457: Protein of unknown function (DUF2457); InterPro: IPR018853 This entry represents a family of uncharacterised proteins.
Probab=22.57 E-value=44 Score=36.64 Aligned_cols=21 Identities=43% Similarity=0.805 Sum_probs=12.3
Q ss_pred CCCcc-----hhccCCCCCCcCCCcccccc
Q 012402 416 EDIPG-----LREAGWTPDQWGHSRFRTLT 440 (464)
Q Consensus 416 ~~IPG-----l~e~GW~p~~~~~~~~r~~~ 440 (464)
.-+|| ++|.|- .|.+ |||.|.
T Consensus 422 rp~PG~GAERMrELGL--~mA~--r~~ay~ 447 (458)
T PF10446_consen 422 RPAPGKGAERMRELGL--EMAG--RFRAYK 447 (458)
T ss_pred CCCCCchHHHHHHHHH--HHhh--hhhhcc
Confidence 44677 467776 3444 777663
No 142
>COG5665 NOT5 CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription]
Probab=22.32 E-value=1.8e+02 Score=31.91 Aligned_cols=33 Identities=21% Similarity=0.244 Sum_probs=26.1
Q ss_pred cCCCCCCCCCCCCCCCCCccccchhHHHhhhHH
Q 012402 11 TAPNRSRSSQTPSPSHSASASATSSIHKRKLAA 43 (464)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 (464)
+.-..++||-+|+|+.+.+.+.-++|.-.+.++
T Consensus 197 ~~e~~~sss~~~~p~~~~~~ss~~~~~~~~~~e 229 (548)
T COG5665 197 GCEIQPSSSNNEAPKEGNNQTSLSSIRSSKKQE 229 (548)
T ss_pred ccccCCccCCCCCCcccCccccHHHHHhHHHhh
Confidence 344457788889999999988889998877755
No 143
>COG5482 Uncharacterized conserved protein [Function unknown]
Probab=21.65 E-value=1.1e+02 Score=30.52 Aligned_cols=51 Identities=16% Similarity=0.339 Sum_probs=38.7
Q ss_pred chhhhhhcCCeEeeeccccccccc----ccCCCCceeeeeecCCCCCCcCHHHHHHHHHH
Q 012402 325 AVGYFIKQGFTKEIYLEKDRWQGY----IKDYDGGILMECKIDPKLPYTDLSTMIRRQRQ 380 (464)
Q Consensus 325 AIgFYkKqGFtkeI~lpk~iw~Gy----IKDYEgatLMEC~L~Pki~Y~~l~~mI~~Qk~ 380 (464)
--+||+|.||..+.++ -|| +++-+...+.-|.|.-+++.--+..-+..|+.
T Consensus 10 vk~Fle~~gyvVkgEv-----~gCD~val~~d~p~vvvicELKl~fnleLilQaVdRa~~ 64 (229)
T COG5482 10 VKGFLEKAGYVVKGEV-----GGCDLVALSDDDPPVVVICELKLNFNLELILQAVDRAAT 64 (229)
T ss_pred HHHHhhcCCeEEeccc-----CCceEEEEcCCCCCEEEEEEecccccHHHHHHHHHHhhh
Confidence 5789999999987655 355 57777889999999888886666666666654
No 144
>PF12261 T_hemolysin: Thermostable hemolysin; InterPro: IPR022050 This family of proteins is found in bacteria. Proteins in this family are typically between 200 and 228 amino acids in length. T_hemolysin is a pore-forming toxin of bacteria, able to lyse erythrocytes from a number of mammalian species.
Probab=21.36 E-value=1.5e+02 Score=28.67 Aligned_cols=55 Identities=18% Similarity=0.184 Sum_probs=46.0
Q ss_pred CceEEEEEEEeCCCccccCHHHHHHHHHHHHHHhhCCCcEEEEccCccchhhhhhcCCeE
Q 012402 277 QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTK 336 (464)
Q Consensus 277 ~~faEIvfIAVsps~QGKGyGS~LMnhLke~Are~~Gi~~LLTyADn~AIgFYkKqGFtk 336 (464)
.+.+||-++|-. ..|.++.|+..+..+... .|+.+++-++...=...|+|.|...
T Consensus 85 ~~IvEvGnLAs~----~~g~~~~l~~~l~~~L~~-~g~~w~vfTaT~~lr~~~~rlgl~~ 139 (179)
T PF12261_consen 85 SQIVEVGNLASF----SPGAARLLFAALAQLLAQ-QGFEWVVFTATRQLRNLFRRLGLPP 139 (179)
T ss_pred hheeEeechhhc----CcccHHHHHHHHHHHHHH-CCCCEEEEeCCHHHHHHHHHcCCCc
Confidence 356889888844 589999999999999998 9999888777666788999999954
No 145
>PRK11611 enhanced serine sensitivity protein SseB; Provisional
Probab=21.16 E-value=2.2e+02 Score=28.99 Aligned_cols=108 Identities=14% Similarity=0.268 Sum_probs=59.8
Q ss_pred ccchhhHHHHH-HHhcCcEEEEEecCCC-------chhhHHHHHHHHHHHhhcCCCCcHHHHHHHhhcCCce-EEEE-EE
Q 012402 192 AYSAREELLKR-EEEAGNLKFVCLSNDG-------IDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHK-SVMV-IR 261 (464)
Q Consensus 192 ~~~~rd~~a~~-eE~~G~I~f~vv~Nd~-------~~~~liwL~~LkniFskQLPkMpkEYI~RLVfD~~h~-s~Vl-ik 261 (464)
.+.+++-.... ++..+..+-.+|.... ..+-..++..|+.+|++. +...+.||........+. .+++ ++
T Consensus 103 ~f~p~EI~~LL~~~~~~~~~~~~i~~g~~v~lg~p~~~P~~lv~~L~~lf~~~-k~V~rAyL~~~~~~~d~~p~LLI~le 181 (246)
T PRK11611 103 EFMPREISLLLGEEGNPLSSQEVLEGGESLLLSEVAEPPAQMIDSLTTLFKTI-KPVKRAFLASIKENADAQPNLLIGIE 181 (246)
T ss_pred ccCHHHHHHHHhccCCCcceeEEeCCCCEEEecCCccchHHHHHHHHHHHhhc-chHHHHHHHHHhccCCCCCceEEEEe
Confidence 44444433333 3335555555565431 344566788899988886 457899998554322222 2222 22
Q ss_pred -CC---EEE---EEEEEEEecCCceEEEEEEEeCCCccccCHHHHHHHHH
Q 012402 262 -GN---VVV---GGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHL 304 (464)
Q Consensus 262 -dG---kVI---GGI~~R~f~~~~faEIvfIAVsps~QGKGyGS~LMnhL 304 (464)
++ ++| |.++-...++. ..|.+|.|+++ .+|+|..+++|.
T Consensus 182 ~~~d~e~ii~~ag~~a~~~l~~d--~~IDi~~v~~~--e~gis~~~~~h~ 227 (246)
T PRK11611 182 ADGDIEEIIQAAGSVATDTLPGD--EPIDICQVKEG--EKGISHFITEHI 227 (246)
T ss_pred cCCCHHHHHHHHhHHHHHhCCCC--CceeEEEecCC--CccHHHHHHhcC
Confidence 22 344 32332222222 35888999986 567998888763
No 146
>KOG0943 consensus Predicted ubiquitin-protein ligase/hyperplastic discs protein, HECT superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=20.49 E-value=90 Score=38.80 Aligned_cols=6 Identities=17% Similarity=0.280 Sum_probs=2.5
Q ss_pred hhhHHH
Q 012402 220 DEHMVW 225 (464)
Q Consensus 220 ~~~liw 225 (464)
|..++|
T Consensus 1878 P~p~im 1883 (3015)
T KOG0943|consen 1878 PRPMIM 1883 (3015)
T ss_pred CchhHH
Confidence 334444
Done!